Prediction of potential genes in microbial genomes Time: Sat May 14 00:56:20 2011 Seq name: gi|312958034|gb|AENW01000001.1| Clostridium sp. HGF2 contig00036, whole genome shotgun sequence Length of sequence - 40966 bp Number of predicted genes - 64, with homology - 30 Number of transcription units - 20, operones - 14 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 32 - 577 597 ## COG3557 Uncharacterized domain/protein associated with RNAses G and E - Prom 807 - 866 5.2 + Prom 593 - 652 5.9 2 2 Op 1 . + CDS 711 - 902 347 ## gi|293402408|ref|ZP_06646545.1| hypothetical protein HMPREF0863_02686 3 2 Op 2 . + CDS 904 - 1185 423 ## gi|160916356|ref|ZP_02078563.1| hypothetical protein EUBDOL_02393 + Term 1235 - 1282 8.1 + Prom 1286 - 1345 8.0 4 3 Tu 1 . + CDS 1379 - 1831 364 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 + Term 1937 - 1970 5.4 - Term 1710 - 1736 -1.0 5 4 Op 1 . - CDS 1819 - 2628 622 ## COG2746 Aminoglycoside N3'-acetyltransferase 6 4 Op 2 . - CDS 2598 - 3032 417 ## gi|293402404|ref|ZP_06646541.1| hypothetical protein HMPREF0863_02682 - Prom 3054 - 3113 5.5 + Prom 3850 - 3909 7.3 7 5 Op 1 . + CDS 3945 - 4181 200 ## 8 5 Op 2 . + CDS 4211 - 4393 204 ## + Term 4401 - 4434 2.9 9 6 Op 1 . + CDS 4444 - 4815 206 ## 10 6 Op 2 . + CDS 4827 - 6116 157 ## lp_0862 hypothetical protein + Term 6133 - 6178 -0.8 + Prom 6491 - 6550 9.9 11 7 Op 1 . + CDS 6574 - 6768 129 ## MGAS9429_Spy0565 phage protein 12 7 Op 2 . + CDS 6821 - 7225 317 ## COG1598 Uncharacterized conserved protein + Term 7250 - 7288 3.5 - Term 7238 - 7275 7.1 13 8 Op 1 . - CDS 7287 - 8207 521 ## COG0860 N-acetylmuramoyl-L-alanine amidase 14 8 Op 2 . - CDS 8207 - 8662 437 ## gi|293399981|ref|ZP_06644127.1| putative holin 15 8 Op 3 . - CDS 8751 - 8873 72 ## 16 8 Op 4 . - CDS 8870 - 9136 283 ## 17 8 Op 5 . - CDS 9215 - 10258 333 ## 18 8 Op 6 . - CDS 10271 - 10981 522 ## gi|160933199|ref|ZP_02080588.1| hypothetical protein CLOLEP_02045 19 8 Op 7 4/0.000 - CDS 10999 - 12915 1072 ## COG4926 Phage-related protein 20 8 Op 8 2/0.000 - CDS 12915 - 13619 146 ## COG4722 Phage-related protein 21 8 Op 9 . - CDS 13624 - 17145 2420 ## COG5280 Phage-related minor tail protein 22 8 Op 10 . - CDS 17160 - 17300 70 ## 23 8 Op 11 . - CDS 17357 - 17725 255 ## 24 8 Op 12 . - CDS 17741 - 18352 557 ## Ccel_2828 phage major tail protein, phi13 family 25 8 Op 13 . - CDS 18354 - 18836 239 ## 26 8 Op 14 . - CDS 18836 - 19156 162 ## 27 8 Op 15 . - CDS 19131 - 19487 294 ## 28 8 Op 16 . - CDS 19490 - 19759 235 ## 29 8 Op 17 . - CDS 19775 - 21460 1756 ## CKL_2961 hypothetical protein 30 8 Op 18 . - CDS 21460 - 22032 431 ## COG3740 Phage head maturation protease 31 8 Op 19 . - CDS 22025 - 23239 528 ## Aflv_0662 phage portal protein 32 8 Op 20 . - CDS 23250 - 24962 795 ## COG4626 Phage terminase-like protein, large subunit 33 8 Op 21 . - CDS 24970 - 25362 259 ## Aflv_0660 phage terminase, small subunit - Term 25394 - 25427 -0.7 34 9 Op 1 . - CDS 25467 - 25712 223 ## 35 9 Op 2 . - CDS 25715 - 26008 218 ## COG1403 Restriction endonuclease 36 10 Op 1 . - CDS 26172 - 26483 237 ## 37 10 Op 2 . - CDS 26458 - 26760 80 ## 38 10 Op 3 . - CDS 26723 - 27031 233 ## 39 10 Op 4 . - CDS 27049 - 27258 230 ## - Prom 27278 - 27337 6.2 40 11 Tu 1 . - CDS 27410 - 27730 180 ## - Prom 27817 - 27876 5.6 41 12 Op 1 . - CDS 27911 - 28132 300 ## 42 12 Op 2 . - CDS 28137 - 28991 489 ## COG0582 Integrase 43 12 Op 3 . - CDS 28960 - 29175 151 ## 44 12 Op 4 . - CDS 29162 - 29383 134 ## 45 12 Op 5 . - CDS 29396 - 30037 357 ## 46 12 Op 6 . - CDS 29952 - 30215 177 ## - Prom 30254 - 30313 1.6 47 13 Op 1 . - CDS 30433 - 30891 485 ## GALLO_0258 hypothetical protein 48 13 Op 2 . - CDS 30964 - 32349 495 ## Ccel_3060 helicase domain protein 49 13 Op 3 . - CDS 32346 - 33242 145 ## COG0863 DNA modification methylase 50 13 Op 4 . - CDS 33254 - 33571 94 ## 51 14 Op 1 . - CDS 33729 - 33887 100 ## 52 14 Op 2 . - CDS 33880 - 34788 347 ## CLL_A2281 hypothetical protein - Prom 34860 - 34919 6.1 53 15 Op 1 . - CDS 35029 - 35571 274 ## 54 15 Op 2 . - CDS 35558 - 35815 62 ## 55 15 Op 3 . - CDS 35855 - 36079 122 ## 56 15 Op 4 . - CDS 36076 - 36267 270 ## - Prom 36336 - 36395 6.0 + Prom 36267 - 36326 9.0 57 16 Tu 1 . + CDS 36348 - 36521 103 ## + Term 36565 - 36595 0.3 58 17 Op 1 . - CDS 36476 - 36649 171 ## 59 17 Op 2 . - CDS 36670 - 36849 226 ## 60 17 Op 3 . - CDS 36868 - 37038 194 ## - Prom 37080 - 37139 6.0 + Prom 37102 - 37161 7.2 61 18 Op 1 . + CDS 37185 - 37562 344 ## Smon_0909 transcriptional regulator, XRE family 62 18 Op 2 . + CDS 37636 - 38028 152 ## Smon_0909 transcriptional regulator, XRE family + Term 38045 - 38085 6.5 + Prom 38160 - 38219 9.7 63 19 Tu 1 . + CDS 38346 - 39266 403 ## - Term 39249 - 39278 -0.2 64 20 Tu 1 . - CDS 39282 - 40691 749 ## COG0582 Integrase - Prom 40905 - 40964 8.0 - TRNA 40808 - 40881 56.3 # Thr GGT 0 0 Predicted protein(s) >gi|312958034|gb|AENW01000001.1| GENE 1 32 - 577 597 181 aa, chain - ## HITS:1 COG:SPy1608 KEGG:ns NR:ns ## COG: SPy1608 COG3557 # Protein_GI_number: 15675490 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Uncharacterized domain/protein associated with RNAses G and E # Organism: Streptococcus pyogenes M1 GAS # 4 171 5 172 177 166 50.0 3e-41 MEIQEREYVYIQSYKHDGSLHRTWAKGYVIEANERRIVAVTNKTLVSESDGRKWVTREPA ICFFYPDKWYNVICMIRKSGIHYYCNLASPSLYDGEAIKNIDYDLDVKVSPTGKTTLLDE DEYQEHSAEMGYSQKLDKAIHHGLDRLMVDIRLQNSPFEHREISALYDKYLRYMDEDKRM K >gi|312958034|gb|AENW01000001.1| GENE 2 711 - 902 347 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402408|ref|ZP_06646545.1| ## NR: gi|293402408|ref|ZP_06646545.1| hypothetical protein HMPREF0863_02686 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 63 8 70 71 75 63.0 1e-12 MLTPKDVLYMEDILDQTLVLNKRVANDISMIQSEDVKTCFENVQEKLKEHYQTLLAILES EAK >gi|312958034|gb|AENW01000001.1| GENE 3 904 - 1185 423 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160916356|ref|ZP_02078563.1| ## NR: gi|160916356|ref|ZP_02078563.1| hypothetical protein EUBDOL_02393 [Eubacterium dolichum DSM 3991] # 5 93 2 90 90 99 65.0 5e-20 MADKSKSYGDKDIATNLLVTLKHMKAELNTFTQEASNDELFTKIDEVYTCVSTLQRDVFN MMTAQGWYKMTADSAKNISKAYTKFSKSESELS >gi|312958034|gb|AENW01000001.1| GENE 4 1379 - 1831 364 150 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 2 148 6 152 165 144 48 7e-34 MKEKKYELILQQLQALLEGEHDMIANMANMAALLFHELPDLNWAGFYLMKNNELVLGPFQ GKVACMHIPSGKGVCGTCALQRCTQLVENVHTFPSHIACDSASNSEIVVPLIKENTLLGV LDVDSPILARFDTIDQHYLEQAVALLLQSL >gi|312958034|gb|AENW01000001.1| GENE 5 1819 - 2628 622 269 aa, chain - ## HITS:1 COG:BS_yokD KEGG:ns NR:ns ## COG: BS_yokD COG2746 # Protein_GI_number: 16079222 # Func_class: V Defense mechanisms # Function: Aminoglycoside N3'-acetyltransferase # Organism: Bacillus subtilis # 12 264 6 262 272 174 36.0 2e-43 MAERSAFTTLNQDTATVSSKEEIVQQLMSLGIQKGMVLLVQADLQRLGYLIGGEQALIEA LIDAVGYEGTLVMPTFTPQLLDPSCQKKTVERVYWDDVRASSFPFDRKLSAPQDALSLQF LRNEGVVRSYHPLYSFAAWGKYAKLICDRHPLHFGLSKDSPLGKIVEFNGYTILLGCEYE SCSMFHLARYSGDQLPIRLVSAPIENNKQTIWKDMLDLDYHTKSFSEIGEAMEERSVVKT SYIGNGRCRMFSAREAITLATAYFHIHRD >gi|312958034|gb|AENW01000001.1| GENE 6 2598 - 3032 417 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402404|ref|ZP_06646541.1| ## NR: gi|293402404|ref|ZP_06646541.1| hypothetical protein HMPREF0863_02682 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 144 1 143 143 159 52.0 6e-38 MKKVLLCLFCMMFFLQGCGKDHEGEPIELTPQEVLVRLQDPKKNSFMLYITSDNCYSCDE YEKVIQEIEEETPFEIYYLKMDTNEEDTDIKQAVEELQITTGKIQSLPSTFYFYQGSLLP ENSKEGYLEKKDLLKWLNDLHLLH >gi|312958034|gb|AENW01000001.1| GENE 7 3945 - 4181 200 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVYEILQEEFKKRGDEALVVRLIDKYGKCFLETDTDIRTACGLISGSTLIKNATYIVE KNEDQWSDATSNLTIKLL >gi|312958034|gb|AENW01000001.1| GENE 8 4211 - 4393 204 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKLTQEIMDNICSYMDDEIREQVHGELSPCTPEEFLNRYLELDPSFNELLQSEFSYIKF >gi|312958034|gb|AENW01000001.1| GENE 9 4444 - 4815 206 123 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKQVSFQTFSYFYKKAQHCADKEGFVEESMSLEHNDWALGYSAEEINDILNYIYELTHC SIAALREKLGLTKVAMADIYISSKRTLLAWEKGERKISDMDRLLISYTVFTDVSYISNDI LIV >gi|312958034|gb|AENW01000001.1| GENE 10 4827 - 6116 157 429 aa, chain + ## HITS:1 COG:no KEGG:lp_0862 NR:ns ## KEGG: lp_0862 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum # Pathway: not_defined # 7 136 6 146 157 70 34.0 2e-10 MARPRKDITGKRYGMLRAISPTGEVDKSGNAYWNCECDCGNTIVVSLRNLRNKQTKSCGC LKTINGKKLGAITRNHCVDGSDPYKLYGDKPRKNNKSGYRGVSLNKRTNRYAADITFKGK RHHLGEFDTAEEAHDAYLKAKEELHEPYLKDFLHSNPEEKSKVERIGVIKKPRGTLVYYT PENRYISIPELSEITGVSRVNLYSRLNKGYTGEELWSAKRLTGKGKCTICVDYYGDQVTI PELSSITGISDATLRYRYDKGYRGEELWTGKIQHYQRKKAISQKAKIYVEYDGEKVSLYE LSKKIGIDYGFLWKRYSKGVRGSQLFQESMKKEILVDYEGEKINLKELSSRTGIGYTTLH RRYRSGDCGKELWRNLQSEKEIDYQGKIVTLNELSKITNISYDTLLHRYSSGDRGEDLWR PIYKRRKKK >gi|312958034|gb|AENW01000001.1| GENE 11 6574 - 6768 129 64 aa, chain + ## HITS:1 COG:no KEGG:MGAS9429_Spy0565 NR:ns ## KEGG: MGAS9429_Spy0565 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS9429 # Pathway: not_defined # 1 63 28 88 88 69 63.0 3e-11 MPMTAKQMIKYLKQNGFQEVPGGGGSHRKFYNPDTRKTTIVPYHCKDLKKGMEQAILKQA GLKK >gi|312958034|gb|AENW01000001.1| GENE 12 6821 - 7225 317 134 aa, chain + ## HITS:1 COG:SP1786 KEGG:ns NR:ns ## COG: SP1786 COG1598 # Protein_GI_number: 15901615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 6 131 5 146 150 67 33.0 7e-12 MSKLYYPAVFHEAEPDETGYWVEFPDLPGCLTQGETLEEAAEMAEDALGTWFAPNSLEPA QGFPKPSNPSDIKLQGRDFVLMVKYDGVEWAKRYNNKAVKKTLTIPAWLNDLADKNNINY SQTLQDALIKKLGI >gi|312958034|gb|AENW01000001.1| GENE 13 7287 - 8207 521 306 aa, chain - ## HITS:1 COG:BH0810 KEGG:ns NR:ns ## COG: BH0810 COG0860 # Protein_GI_number: 15613373 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 2 183 3 186 263 60 28.0 5e-09 MKILLIAGHGAGDPGASGCGYKEANLTRELVNLIAPKLRKYAIVDVYNQNRSAFYDVQNG TFKISKYDYVLEVHFNAFDGSGHGTEIFVTDSEKYTDVEQAIMNKLGKHFVKRGGSGVKV TNWLVIYTCKCLGISSALLETCFIDNKADMAEYQANKESIAQGIVDGIAEGFQLKANSTE QKPGNKPAKHKKPSKPAKPGQPDQILHKGEYFVITGVHSVDQVLANMDSIWCEEMTGNGG NSIQAGPLTKCNKNGKKTKSQVFSVGDYWKCDKKFKVLAVDVPTNSVQANVGGRKIWLYA GPLREV >gi|312958034|gb|AENW01000001.1| GENE 14 8207 - 8662 437 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399981|ref|ZP_06644127.1| ## NR: gi|293399981|ref|ZP_06644127.1| putative holin [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 150 4 153 153 207 74.0 2e-52 MAQTITDNYNAFVGTVIAVISVIFGEHWYLFALFLALNIADWVTGWMKSRIMKKENSVKG WQGVLKKIGYWIMITFAFMVAAGLIEIGEIIGVDLQITTLLGWFVLASLIVNEARSICEN FVEAGFNVPKVLSNGLAVADKLINKESEDEE >gi|312958034|gb|AENW01000001.1| GENE 15 8751 - 8873 72 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMYRWIKEYYDAGIYKDSDLEIFIAGGMITKKQADEIKAG >gi|312958034|gb|AENW01000001.1| GENE 16 8870 - 9136 283 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MESIDGYALIDEGEGDRFTHAQGNYLESGLMDEQGRYNYRLLDGNAVLLTEEEKQELFPP IEPELSEQERFNAAVLLELAKLKAGDAV >gi|312958034|gb|AENW01000001.1| GENE 17 9215 - 10258 333 347 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKVLVGNFKGPKGDTGKTGPAGPQGPQGPQGNPGTVNIADDFTTEDPTYALSAPKGKEL YDNLLQIGNPNLLINGDFQVWQKGNEFNITSNRMYTADRWIAYMNASDGYVPYTITNSSR RMKISSTAGECKFLIFQHVELNNSIIRKILGKKLTLSVKIISSNVQEISTSATILYNSSD KPSVSLARKTHTISANKYTIMKMTFDVVSDADFDDVKSLQIIFSSPGITSDVYIDYVKLE LGEIATPLVPRPYAEELMLCQRYGRYIYVDYTMNAASNSFSNMMSIPVDMRIDPTLTLKA AGTLTNITSEKITHASFTNRVRFSFSASAAGMLRVYGREYWADAEIY >gi|312958034|gb|AENW01000001.1| GENE 18 10271 - 10981 522 236 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160933199|ref|ZP_02080588.1| ## NR: gi|160933199|ref|ZP_02080588.1| hypothetical protein CLOLEP_02045 [Clostridium leptum DSM 753] # 109 231 107 239 243 64 32.0 4e-09 MIKVTRKGLTLTLDAEIIPAQGSADVPVQYINDTDAYKDYIVAPKIGWYKKNGMYSVAIA RYSNKVFKIPAEAFGQDGIIFIAIEMTDPKDAAHIEVTQQIAARCTPAPNGTVILPSKDE WQKAVADFVKQYMDSEFETPASELIEKQKEQIAYIQNALDTGEFIGPRGPQGIQGIPGEK GEKGERGDSGVITPANGVFTFVGDAAGNLYCYYADSATPPTFEVDENGNIYMDIPG >gi|312958034|gb|AENW01000001.1| GENE 19 10999 - 12915 1072 638 aa, chain - ## HITS:1 COG:CAC0063 KEGG:ns NR:ns ## COG: CAC0063 COG4926 # Protein_GI_number: 15893360 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Clostridium acetobutylicum # 11 373 15 366 1645 121 32.0 4e-27 MIQVYKPGNRNFDYNGDYNLKPITCELKMKLKGEWVVTLRNPLDENMEGIVENAILCMDT PIGKRQLFMINEVDKNDDFIEAYAIPIFLTNDIYFFDTRVVNKTAQDALNIMFKDTKYKG YSDISKANSAYYQEMCANEAISGDNDNAFLNRWGGEPIYKNYEIYLNKRAGADNGMRAEF GFNLTGVEEKIDMSEVVTRIRPKAYNGHMLPNNETVDSPNIEKYEPRRFPPVVFEYTDIK LKEDAQEGDEENGITICDTKAILYQKLRERAKREYTINKVDMPIITYNVQMVDLSKTDLY KEYSELVRVSLGDTVHVSHRRLKIETTPRVIELVYDGITNSVTSLTLGDHKEDYFDRLSK TQHIVDTIYDKVSNTIMAQRIAGVVNLMMTSLKAQKDIAKRQDVRAILFEDIDKSSPTYG ALCIGTQGIQIAKKRNETDTDWKWGTAIDFEAINADYVITGILTDRNGKFYLNLDTGELR MKDGSFAGTISGATINGSKIIGGTIEIGNNFSVAKDGIMRCADAVMKNVTMESGTFKGKL TTEYDAYIGRNLHLSYEAGRISQITLGEKEDTVIILSEDLIRIGIFNNNTDLLSRPSISI TKDDIFLNLNEDNHIRINSILGVTMKTKGKFIDMNYDI >gi|312958034|gb|AENW01000001.1| GENE 20 12915 - 13619 146 234 aa, chain - ## HITS:1 COG:CAC0062 KEGG:ns NR:ns ## COG: CAC0062 COG4722 # Protein_GI_number: 15893359 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Clostridium acetobutylicum # 5 234 6 231 231 88 30.0 1e-17 MYHMFLNDECSETLRLYVVKRPDVPSPQKRYNEKGLPGRDGKLYEDTGYYEDITISVELN YMTSPDNWNNVWRMAKRWLLTSVGKRLSFSDDRSVYYRIKKVEVSTNARNSLRIGRFTVN LTLDPYTYLLSGIQLYDPQQIKDNPYEETTPVYFIKGEGVCTLTVNGHAIKANVGQNLTI DTYRRIAYRSDGTLHNTAISGEYEDMLLIEGENKISISDPAKFTLTIQPNWRCI >gi|312958034|gb|AENW01000001.1| GENE 21 13624 - 17145 2420 1173 aa, chain - ## HITS:1 COG:lin2568_1 KEGG:ns NR:ns ## COG: lin2568_1 COG5280 # Protein_GI_number: 16801630 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Listeria innocua # 17 531 20 523 943 189 27.0 2e-47 MGYDIGPRIGITGEREFNNQIQKINGRLKLLGSEMNLLTKKYDGNSDSLDFLQDKNEILK KQLQEQDTKVSVLSKAYKEQSENLGNLKKGLENATKAYGENSAEVLKAENALRKQEDVMA KLGTSINETKGYCEALKNQIADNSKKMDELSAAEKNASSKLGELTQDIARQQQELSELQK AYQEAALAKGKDDRETQQLAAQIVALSKNLQTNKQRLSAVRTESKQLAGALDEVEDSAKD AGDGFTIMKGAMADITADGIQSLAGSLKELITQSDGASASFQAATGASADEMKRYNEEMK ELYNNDYGDSLQDIADSMARVKQQMSDLDDEDLKNVTAGVKTLEDTFDMDFNETLRGTKQ LMYQFGLSAEDSMDLIAMGAQNGLNYTDELGDNISEYAGKFAQAGYGADDYFQLLKNGSQ NGAYNLDKINDAINEVTTRLADGTIEDSLDMFSSETGKVFKAWKDGRATQKDVIDAIVKD IAKTTNQQKKLTKAATAFGTMGEDANAKFVESLTSVGDEFSDVSGKMKEIQDIKYGTVES QLRGLGRTLQTDLLEPMIQDAMPVLKGGVEWMIDNLPLVEGALVTLGTAATTAFAVNKIS KFKDSITNIAGGLTKLATADIPGVSSALGGLGSLIAAHPLLTLASVAAAAGTAMFIFSQK TDAATEAIKKSSEETQKQIDAWKEMQAAQEEAVEGIYGNFEYYAQLKTELESITSANGEV KKGYEDRARVILGELNDALGTELQMNGNIIDSYKEQMKNIDDLITKKQAQALVDSGMDEY TEAVKKNAQATRDMMKAEDEYLAKRAEVEAEIKKMEDNGLRDGNINYDATKSRLNNELEE YKKNYEKKKELVDGYTQTIAEQKYLMEEMEKGTAESQKNIVDYVANTYKENGKSLQLSTQ EQIDMLKRYVAEHKNSEDAAVKKQVEASEMQLKTLEKQLKDELGVVTDAIPEHATLWETM CTAGLNAYKKNEDQFLSAAFGQTEKAKKGIDDGTPQTKAAWQALADKGYAVLDGNTWKYT DAGENYALGLKNGVNNRAGEVFGAVSNMGLMMISALHDSLKENSPSKAAFEAGDFFTIGT INGVENKKKKLFSTITDMGKGMVERLQDNSTIMQRAQSEMFGVDGTFLSNTKAILESEQV NQINVYLDSRMIEQMVVKRVNRNQTFKSMVTGG >gi|312958034|gb|AENW01000001.1| GENE 22 17160 - 17300 70 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGMQEYEFAHMPIGELSDIVEMYQRIKGYAEADSEINGDFIPSLK >gi|312958034|gb|AENW01000001.1| GENE 23 17357 - 17725 255 122 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRISLLSIEGKTYPLVFSLNAAEQIEDEYIPVTKMVDCLLEPEKFKKNSIRLVKDIVYIM ICEGIQYCNRKEIKQQDGKELMLDIPNKESLYADIGYEDSGILTEAMYSTLVKSKKKEST TK >gi|312958034|gb|AENW01000001.1| GENE 24 17741 - 18352 557 203 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2828 NR:ns ## KEGG: Ccel_2828 # Name: not_defined # Def: phage major tail protein, phi13 family # Organism: C.cellulolyticum # Pathway: not_defined # 1 178 1 164 199 74 35.0 2e-12 MAIKGLSMLIVGMYDYSGTGNKPTYSEPATVAKMVEYSLAINQSEDNPLYADDMDAEHDK GTFQNGELSLTTDDLTQEASKKVLGIRTEEFTYNTDKNATEGIYDDKRVAPYLGIGVIEA HQNNDVTKYRAVFLPKVFFNVPEQAATTKGESIEWQTPTITGTVMRSDLVDDKYEHPWMM DAWFQTRAEAALYLEYKCGKTDA >gi|312958034|gb|AENW01000001.1| GENE 25 18354 - 18836 239 160 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKIQDKGLNDYIKSIKRMGKVSDDIIHKGVYKGAGIIADAIKDEIKDIPVDNGYGSPEK PISGISNRQKADLIEGMGIAPIQEDSDFVNAKVGWDGYGRDKTKKYPKGVPNQVIARSVN SGTSFRKKNPFVNRAVTKNKKTAVKAMADTIENEIKKEMK >gi|312958034|gb|AENW01000001.1| GENE 26 18836 - 19156 162 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELLKRVRDALLTVTKDVHHFEKTGSEERYIVWQEGIEGDSLHADDKHEIMVINGTIDLF TKQEYDSWVQEITRALEDAEITCRIESIQYEDETGYIHYEWHFEVA >gi|312958034|gb|AENW01000001.1| GENE 27 19131 - 19487 294 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAYTYDDGIVDICERVNVAEPGNKPEYDYRPRLSLYFGYEKVGIVRNYTAKQAGDTLDEV IHVYRERSISAGRDIASIDGRQYTILQVQHGQDDEGIPITVLSLERRGEPYGTTEAST >gi|312958034|gb|AENW01000001.1| GENE 28 19490 - 19759 235 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDEELLLTVLKQDLKTPPSEEPYLRTLLKNAEALMKRMGIQDDGSMDYQYTIEHYAAFLY RKRASSEMIMPRFLRYELNNLLFSQKARE >gi|312958034|gb|AENW01000001.1| GENE 29 19775 - 21460 1756 561 aa, chain - ## HITS:1 COG:no KEGG:CKL_2961 NR:ns ## KEGG: CKL_2961 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri # Pathway: not_defined # 1 450 1 426 426 192 32.0 4e-47 MALKVLLMRNKAATKKKLLEELRSKDEGFQTREQELEASIAEMDESTPEADRKVVEDAVE DLTKEKDAHEAAKKKLEDEIEELENKIKEQESIPPEPQAGDDQGASQNSRSKRGKDRDME TRTEFFGRTMQERSAIFANEEVKDFMQQVRSCIKEKRAIGNAGLIIPQNFLPMIKEVTEA NSKLLKYTNKSDITGTARITIMGSVPEAVWTEQCGKLNELELGFNDVEMDGFKVAGFFKV CNALLEDNDVNLAQELINALGIAIAKAKDKAIVYGTGVKMPMGIVTRLAQTVKPSDHNDT EREWKDLHESNIKKIENKTGKELFKEIVRCLKMIFTDYDSGNLVWMMNRQTKLDLVVEAM DTNMNATIVSGMNDTMPVVGGKVEELKFMADGDIAFGYMTNYKAVQRKGLQLGQSEHVRF LEDQTVFKGTERFDGKPVIAEAFGLININGKTPTTSIVFAPDKANEEDVQLASLKIGSNK LFPVFSAGTYEYMVNTSNASSKIEVVAKRAGAVITIKNGVTPVNNGETASFTDGENTLSI TVSFAGVEKEYIVTVNKSAAA >gi|312958034|gb|AENW01000001.1| GENE 30 21460 - 22032 431 190 aa, chain - ## HITS:1 COG:L55698 KEGG:ns NR:ns ## COG: L55698 COG3740 # Protein_GI_number: 15673021 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Lactococcus lactis # 3 188 4 191 198 168 49.0 7e-42 MNRETRQLRSARARFETREQDNDLYISGYFAVFNSTYEIWEGMSESIDSHAFDDQLNEDI RALIDHETRLVIGRTKAGTLQLRVDDTGLWGDVKINRNDVDAMNVYERVKRGDVDQCSIG FEIVDEDVSSIDNKTHWTIKKVKLYEVSIVTFPAYEETCVSARKRQLEDMVKRSFEAWKM NTIKKLKGES >gi|312958034|gb|AENW01000001.1| GENE 31 22025 - 23239 528 404 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0662 NR:ns ## KEGG: Aflv_0662 # Name: not_defined # Def: phage portal protein # Organism: A.flavithermus # Pathway: not_defined # 40 396 38 394 403 407 55.0 1e-112 MSKKKYKGKVRADPRQKRNDNGPLTYLCDIGAFDMLCSSGYTSLAKNPEIISAVNKIANL IGSMSIHLMQNTQDKGDIRIRNGLSRKMDIEPNRYMTRSTFIQTIVRALLLEGDGNAVVL PKTKDGLLDDLLPIPPSQTTFLQDGYGYKIVIYGETYEPWDLIHIAMNPNPEVPWKGEGY RKSLKQVAETLLQASITKKGFMESKWKPSIIVKVDADTEELSSKKGRSKLLQNYVTSTEA GEPWMLPADSFEVETVKPLSLKDLAIQENVELDKKTVAAILDVPPFVLGIGEFKADAWNN FINTRIKTICQCIEQAFTKAVLIDPTLYFRFNARSLHSYDLDTLANVGANLYTRGIMEGN EVRDWIDMPHKDNLDKLVILENYIPAGMIGDQKKLKKKEGEKDE >gi|312958034|gb|AENW01000001.1| GENE 32 23250 - 24962 795 570 aa, chain - ## HITS:1 COG:lin2579 KEGG:ns NR:ns ## COG: lin2579 COG4626 # Protein_GI_number: 16801641 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Listeria innocua # 1 570 13 581 583 598 53.0 1e-170 MDYVNGICDGSIVANEYRIKACQRFLDDLQDERWDFKTSDAEFVIGIIELTICHQQGESL DGTALRGTPFLLMPFHKFIIYNLVGFKLANTSINRFTECLIFIPRKNVKTTFAGALAYAL GLLWRDSGSKIYIVAAAMKQTMETFKFIEYNIRRMEEDDNDHEGTFHIIDNNNEHSIDAT IGNGLFHLDALAANPDAQDSFNCNLAIADEIHAFKKPKQYNLFKEAMKAYTNKLMIGIST AGDDPNSFLAQKVTYCKKILDKEVENDRYFIFICEADYSTDENGAKFLDFTNPRIQEMAN PAYGRSIRPDELMEGAMEALNDPQQRKDYFAKSLNVFTDAIDTYFDMMQVTSSDEKYNWT LEELAKLPIKWYGGADLSKMHDLTGATIYGTYKDVDITISHAFIPRAIAHKKADEDNIPV FWWEEQGWLTMCNSNVIEYEDIVKWFIHMKKMGFKLKWTGYDRRYAREYVMKMRKAGFKM KDQLQRYVEKTEAFREIERKVIKQQFYYLHNKAFEYCISNVKAIEDTDEFVRFQKVMPTQ RIDLFDATVIACKQKLIANEKSANAAAFLD >gi|312958034|gb|AENW01000001.1| GENE 33 24970 - 25362 259 130 aa, chain - ## HITS:1 COG:no KEGG:Aflv_0660 NR:ns ## KEGG: Aflv_0660 # Name: not_defined # Def: phage terminase, small subunit # Organism: A.flavithermus # Pathway: not_defined # 16 126 21 128 129 78 41.0 9e-14 MLTDKKITIRTNKIRNETIEKMRSLGVYREEFTIPIQRYADMRMQYDILCKTWRETGCKV TEKYTNKAGATNVRKAPLYLSMENLRRELIEMENLFGLTPKGLKAIKSKGLEQGKKSALG EALEKLERKS >gi|312958034|gb|AENW01000001.1| GENE 34 25467 - 25712 223 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDETIGSINAAKLKTSNEFKNTVDDMMKNTTPVILPTNGRDDELIEIIAMLKCDISYITR EVSADGKKKTMIVLMGDDDYE >gi|312958034|gb|AENW01000001.1| GENE 35 25715 - 26008 218 97 aa, chain - ## HITS:1 COG:L51784 KEGG:ns NR:ns ## COG: L51784 COG1403 # Protein_GI_number: 15673017 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Lactococcus lactis # 1 97 52 148 150 64 36.0 5e-11 MFDYYHRKWKKKQKHILRLDRYKDRVAAMYGRTEEATTVHHIYPAEEYPEYAWCDWNLIS VSQGSHNKLENRKTGELTVLGRQLMDITVPGKEWRRK >gi|312958034|gb|AENW01000001.1| GENE 36 26172 - 26483 237 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKVTTRNKRFKKVEKMLFLHPKCTQTSYKKLDEAIESIQGDKYYPIIDLHYFKQMTFEE VIAATGFAKQTVYKHRDRLICRIIDTLYADEVMKEIMETKEDV >gi|312958034|gb|AENW01000001.1| GENE 37 26458 - 26760 80 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKPAKIILNVMNDVITPEDAVEEVSRMSDQVVYVRVPFDVLVLITRASGYVESYDALQLT REWLQTPENVFIRQYGFKWQPPESSIRKVREIYEQSNHKK >gi|312958034|gb|AENW01000001.1| GENE 38 26723 - 27031 233 102 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYDEFKDLYDMRFHGKLYTVILKLYQYTDTDTKKRCIKAEVYDPEDEGLKTIKAPIEEF TFPKRKATCKTCVYQAKGYCHKFETSRNKDNEACEDYLECDE >gi|312958034|gb|AENW01000001.1| GENE 39 27049 - 27258 230 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLKKAKEIMVNVNVEKATYLNTLEYEAQQMKETDLHAASVRTELKKTKDEIKAIEVVLG TLAVYEMTV >gi|312958034|gb|AENW01000001.1| GENE 40 27410 - 27730 180 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNEYQELYEGIELMCLCTDTYEDAEEYLKPLRELIEHYIVLEDAFTRACEHIKYENAEGK MDDTSACPKSIYAFTPNRCRKDKCRMSNEKCWKEWFLYLAKQKNRK >gi|312958034|gb|AENW01000001.1| GENE 41 27911 - 28132 300 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLALIKIDSEEQTMELRIVSGEELNAIEYMTLGYACIEEASKKIGKDTEDIIALLLNS QKEEARGKGVKMS >gi|312958034|gb|AENW01000001.1| GENE 42 28137 - 28991 489 284 aa, chain - ## HITS:1 COG:SP0506 KEGG:ns NR:ns ## COG: SP0506 COG0582 # Protein_GI_number: 15900420 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 13 277 4 262 265 111 30.0 1e-24 MTKEGMRRSIDGFIIKEREAEKSKNTVRHYAHVLDLLYDFLPEGELNKTGIIEFKEHLLE SGFEPSTVQNYITIVNKWLKYAKMKRFTVTNIKVQGKASLEEEELLTPEDFMRLLRQAKR MGRKQYCMIMEIMGYTGIRLSELQYFTVENIRKPKLIVHNKGKIRTIIMPTSLKKKIKKY IEEQGIESGYIFPGKKEGAMLHPTTVYKNIRKIAATAKIKKTKAHPHAFRHLFAVRYIEE GGQPSDLADILGHSQLETTAIYTRTTDKMKKIQVERINYRNRRK >gi|312958034|gb|AENW01000001.1| GENE 43 28960 - 29175 151 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKDRIKPCPFCDGKVKVIKSPIGVIFFKCVECGCIVSFDMEKCNKHPEKAIEAFNRRVV SHDERRNAALN >gi|312958034|gb|AENW01000001.1| GENE 44 29162 - 29383 134 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIRIIKELRDLPKHKRPMQGKVYETLDQISGRYNAQENCRKIIIVNGHKVSVHREEYEP IQKIRRRKSNGEG >gi|312958034|gb|AENW01000001.1| GENE 45 29396 - 30037 357 213 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRTEDRELASGWTSRKDMKMIVRKEQSKTFYKYLKLIYDILATETSGYALYIHEGRLYF TTYAMGGKLSISSSGVEVYDELCKEPGAYEIRMTPHKDFEISKLPESKVTEDMKNIFKHA TIGLEEKNHLCEINSNCSSVIADIARKSKLRIKDRYLKVMKKLQDFDVSMNKDFIICTKA EALDKENLQVVLIMYFWCEDIQDEYDQDKLGMD >gi|312958034|gb|AENW01000001.1| GENE 46 29952 - 30215 177 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQIDFNIPVRCPFCGVWVEDEFSVSIREDTTKMLQCRCGKSFYVRREISAKVKLYPVNYF ETNGRSGAGFRMDQQKGYEDDRKKRAK >gi|312958034|gb|AENW01000001.1| GENE 47 30433 - 30891 485 152 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0258 NR:ns ## KEGG: GALLO_0258 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 65 147 1 83 84 64 39.0 1e-09 MRYKVTWTMYFTDSNIPDTIVVAIIEAATVSKARYAAYKQMIPDRGYRFEWFINETEVEK ESEQMIHKLKILPQYFEDKLQGMKKWEVRKNDRPFKDGDTLQLEEWSEETGYTGRLLQEY IKKIYTEAPGIKEGYIIMNTEYISASYREKGE >gi|312958034|gb|AENW01000001.1| GENE 48 30964 - 32349 495 461 aa, chain - ## HITS:1 COG:no KEGG:Ccel_3060 NR:ns ## KEGG: Ccel_3060 # Name: not_defined # Def: helicase domain protein # Organism: C.cellulolyticum # Pathway: not_defined # 1 458 1 450 460 480 51.0 1e-134 MTYEEFLKTKEYTIEPSGFTVENLNENLFDYQQAITKWALRIGKAALFEDTGLGKTIQQL SWADAVAKHTGGTVLILAPLAVSKQTAQEASKFGIICNLAEGQEDIKPGINITNYEKIHK FDTDSFSGVVLDESSILKSYAGKTTKDLQERFAYTPYKLCCTATPSPNDYTEIGTTAEFL GVMPRSEMLATFFINDSIKKKGKNDRIGWRLKRHAEKEFFRWMATWSMMIKSPADLGYDG EKFVLPKLHVKANILKSEPDAESLFVEYAETLQERREARKQSLDERVEMAKNIARTKENC LIWCDYNNESSALHKAIRESVEVKGSDTPEHKEKAMMGFASGDVKYLVTKPSICGFGMNW QNCHDMIFCGLSDSYEQFYQAIRRCYRFGQKHEVNVHVIISEKEMNVLNNIKRKQTDHER MSAEMVKVMSESAKVELFGQQRKKTDYIPEISMEVPKWLPF >gi|312958034|gb|AENW01000001.1| GENE 49 32346 - 33242 145 298 aa, chain - ## HITS:1 COG:MJ1209m_1 KEGG:ns NR:ns ## COG: MJ1209m_1 COG0863 # Protein_GI_number: 15669901 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Methanococcus jannaschii # 27 281 33 258 260 72 27.0 1e-12 MKKVINQVITEHYALYNGDSCEVMQGLPDESMGYSIFSPPFEDLYTYSDSPRDLGNCRST EEFYKQFGYIVAELFRITKPGRLVSIHCMDLPTTKASDGFIGLRDFPGILRELFQDYGFY YHSKITIWKDPVVAMQRTKHIGLLHKQLKKDSAMSRQGIADYIVTMRKPGENKEPITHTN ESFPVSKWQEYASPVWMNIRQSNTLNRTSAREERDEKHICPLQLDVIERCIELWTNQGDT VFTPFLGIGSEAYQSIKMHRKAVGIELKESYFEQAVKNCERAANAEEQLEFLFEGDEE >gi|312958034|gb|AENW01000001.1| GENE 50 33254 - 33571 94 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLKEIEKLLKKKAIMYKKSYDESEVSIGRYPKYIIVYIADIDYTLPDYPHTGLFYWIVS WNDWEKSSTPKRNQAYTPAEAIKIIKQAMQELGISKNTIQETLFF >gi|312958034|gb|AENW01000001.1| GENE 51 33729 - 33887 100 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHKEAMRKCSMCGEYKPESNFRFTKTQNRYNAYCKQCERWYNANYKRLRRER >gi|312958034|gb|AENW01000001.1| GENE 52 33880 - 34788 347 302 aa, chain - ## HITS:1 COG:no KEGG:CLL_A2281 NR:ns ## KEGG: CLL_A2281 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 19 291 8 279 281 132 34.0 2e-29 MKRHNRQRGRPSKQHYLSYDYERAFDIQTNMLSESQIERALKDGKIKSIYATKSIYSGTQ LEVEIFPEFTKRCMIPAAGKRKPTKEEMQNLNDKNARKKVIRLLNTNFKTGWWITLDYMD KYLPQSIEEALKDIQNYFRRVNRKLKKLGKERAKYLYVTEWEEGEIRCHHHFVIDCGLTL DDLNKLWTKGKRTELRPIDYDENGVTGMAKYVTKKPRGKRRWNTSKGNLKQPTIRKNHST FKRKHARAMKEDFSVIERMLRQKYKGYVFKDAQVFVNQVNAGIYIYAQLRKWDPIKDGDN SA >gi|312958034|gb|AENW01000001.1| GENE 53 35029 - 35571 274 180 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKTDKLYLINAKLNEIKESVQMYRENENMYCYFNKVLEHLDAALEEMRGHPHWKRPVDL PEDMIWSDACNPDDRSDPFAYGGDMPVEDFVRMQDEYFANEGNEVLDAADFRSEAKAEEE IENDEENKIAAGINGCDTGCAVDGNVECRTSIDGKNRTTERFYTCSVNGKKEVYSVVPDK >gi|312958034|gb|AENW01000001.1| GENE 54 35558 - 35815 62 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDITSATASGADPEIGVTIGVDPAVIPYGTIVLINGKEYVAQDTGNYTGNHIDILCESEA AAERLGTYKTKVFIKSEGGKDHGKD >gi|312958034|gb|AENW01000001.1| GENE 55 35855 - 36079 122 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIWKVSVASVMLLTVTVSAILVKNEWEQKVERLQLLNRVTNEELQMVRQVVKEQNAELQ EKNKEIAKLKSQPK >gi|312958034|gb|AENW01000001.1| GENE 56 36076 - 36267 270 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTANESLITESRKAKREFIDKVVFGLTLNEAEEKFLAFLVDMEDVETVLKFCSIIRKAKE YQQ >gi|312958034|gb|AENW01000001.1| GENE 57 36348 - 36521 103 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQKSNKELAVELACAALHAMSNMSQSQKVFSGTDIQNILNECYSFVTNLPETKDGV >gi|312958034|gb|AENW01000001.1| GENE 58 36476 - 36649 171 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNEMIAISETLYENIKNLEYKQALAALEIAKILYEAKKNSDNYTPSLVSGRLVTKE >gi|312958034|gb|AENW01000001.1| GENE 59 36670 - 36849 226 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQLNIPVYVGNKEICKEFNCSPATAVKIMKNVKVANKDKKNPYERKVPLSWVLEMYGE >gi|312958034|gb|AENW01000001.1| GENE 60 36868 - 37038 194 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAERVREDQKEIYELAAMLYEAKKRNPNISHDLNVFFKGLSIGVNISNGFQSPAV >gi|312958034|gb|AENW01000001.1| GENE 61 37185 - 37562 344 125 aa, chain + ## HITS:1 COG:no KEGG:Smon_0909 NR:ns ## KEGG: Smon_0909 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.moniliformis # Pathway: not_defined # 4 113 2 108 115 70 40.0 3e-11 MDCNGRIKLLRKTLNLSQDAFGEKLGIKKSAVSKIENGENGLKDQLAKLICRTFNVDYFW LTEGADVDMFMAFPETIIDEVVEEFDLNADDRALIETYLEASHEERRVLLNFFQTFAKKI QKDEE >gi|312958034|gb|AENW01000001.1| GENE 62 37636 - 38028 152 130 aa, chain + ## HITS:1 COG:no KEGG:Smon_0909 NR:ns ## KEGG: Smon_0909 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.moniliformis # Pathway: not_defined # 4 105 1 101 115 74 43.0 1e-12 MKDINSRIAEVRATLELSMRAFGEKLGISGSSINAVEKGHNNPSDQTVKLICKEFNVNYL WLTEGKGEMFEAPDSALDDLAMQYDLNEIDLYLIKAYLDLSKGERAEFSEAILNKLLTIL KKELHTDQKN >gi|312958034|gb|AENW01000001.1| GENE 63 38346 - 39266 403 306 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKLFTYGILASIFIGGCATTKTPEQSYKSLKNYSSKILVNYRDINGDYRDVNNSCYNID GVEKKCARILKEPNYNYEVILYNDDNDAIISVDVDDGKSGNITYMEDSQATNYFVKDVND EIISSSDGAALDDVKKDYKEILSNIGLSENEFRDSVEYFAKKEGKSIIDQALKEYKLQKP RDYDDIKTAILKDVEISKGENYINVDFNVNTENLLYIPGKDEGIIYTSKLDKNIEISILP PNEVIASTSDKKCTYSLNRDKIIDGHCTQSEIDDAKSMEFWFNEFLHNHRITLNELFTFF RQYNKG >gi|312958034|gb|AENW01000001.1| GENE 64 39282 - 40691 749 469 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 147 420 98 365 368 99 28.0 1e-20 MTIIRDKKQLIMKGKLTRWDGSYYNYEIPALAKTEAKAAKEEIIFKDEFKKRQEDIKIRL SAGEYIEEILGPTPQIADYPKSKIKEYKKNYDENIAKAKGLFKPKTQTRKDRLFNSVCED FLSRYVDVKESTKKTKEDDLKRPIAKFGDRDIVSITSEELQEYIWQLDYEISERSVKKIF YAMNPVFQLAVEKGYIPANPMSKVKRRINKDKPREEMKIWEPDEFQLFLDEFPEKDRFYY FFEFLYFMGTRSGEANALTWNDIHFNENTVEIKKSVSFKLRPYKITSPKNPNAHRKISMP KRIHDSLKELYKLQKEYEGFTLDCFVFGFDKPLDPETVRRVKREKVKAANEKDENKNNQL ELIRVHDFRHSHASYLINNMSDQFTDFDVAKRLGDTVQTLHNTYAHWFKQRDKSIIDFMD KDACKKKDDDFKRTNAIRYDELKALKELLDNDIITKEEFEIKKKEFLGI Prediction of potential genes in microbial genomes Time: Sat May 14 01:03:21 2011 Seq name: gi|312957890|gb|AENW01000002.1| Clostridium sp. HGF2 contig00035, whole genome shotgun sequence Length of sequence - 141639 bp Number of predicted genes - 139, with homology - 134 Number of transcription units - 52, operones - 24 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 318 - 377 3.9 1 1 Tu 1 . + CDS 415 - 1059 633 ## COG2946 Putative phage replication protein RstA + Term 1290 - 1328 3.4 + Prom 1199 - 1258 3.2 2 2 Op 1 . + CDS 1332 - 1556 173 ## CD0381 putative conjugative transposon replication initiation factor 3 2 Op 2 . + CDS 1575 - 1754 193 ## SMU.1031 putative transposon excisionase; Tn916 ORF1-like 4 2 Op 3 . + CDS 1833 - 3026 624 ## COG0582 Integrase + Prom 4972 - 5031 3.9 5 3 Op 1 . + CDS 5127 - 6755 557 ## Ccur_00810 Cna protein B-type domain-containing protein 6 3 Op 2 1/0.000 + CDS 6763 - 7587 232 ## COG3764 Sortase (surface protein transpeptidase) 7 3 Op 3 . + CDS 7584 - 8417 226 ## COG3764 Sortase (surface protein transpeptidase) + Prom 8626 - 8685 7.4 8 4 Tu 1 . + CDS 8785 - 13020 1455 ## FMG_P0126 hypothetical protein + Prom 13336 - 13395 6.2 9 5 Tu 1 . + CDS 13580 - 13885 96 ## Mbur_0365 putative transposase + Prom 13890 - 13949 6.0 10 6 Tu 1 . + CDS 14002 - 14175 206 ## - Term 14275 - 14317 2.2 11 7 Tu 1 . - CDS 14438 - 14578 92 ## Apar_0207 filamentation induced by cAMP protein Fic - Prom 14722 - 14781 3.6 + Prom 14744 - 14803 5.9 12 8 Tu 1 . + CDS 15012 - 15503 208 ## COG1284 Uncharacterized conserved protein + Prom 15506 - 15565 2.9 13 9 Op 1 . + CDS 15653 - 16534 571 ## COG1082 Sugar phosphate isomerases/epimerases 14 9 Op 2 3/0.000 + CDS 16565 - 19357 1583 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 19391 - 19428 1.6 15 9 Op 3 9/0.000 + CDS 19467 - 19904 338 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 16 9 Op 4 13/0.000 + CDS 19894 - 20376 510 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 17 9 Op 5 13/0.000 + CDS 20393 - 21169 721 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 18 9 Op 6 . + CDS 21166 - 21984 640 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 21993 - 22040 -0.7 - Term 22261 - 22311 10.2 19 10 Tu 1 . - CDS 22332 - 24014 1429 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 24182 - 24241 6.7 20 11 Op 1 . - CDS 24260 - 25057 896 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 21 11 Op 2 . - CDS 25060 - 25698 831 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 25851 - 25910 6.4 22 12 Tu 1 . + CDS 26088 - 27587 1617 ## COG2317 Zn-dependent carboxypeptidase + Term 27671 - 27727 -0.8 23 13 Op 1 . - CDS 27964 - 29043 840 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 24 13 Op 2 . - CDS 29087 - 29389 267 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 25 13 Op 3 . - CDS 29468 - 30136 308 ## COG2364 Predicted membrane protein 26 13 Op 4 . - CDS 30133 - 30945 493 ## COG0561 Predicted hydrolases of the HAD superfamily 27 13 Op 5 . - CDS 30976 - 32349 1482 ## YE2832 hypothetical protein 28 13 Op 6 1/0.000 - CDS 32406 - 33848 1274 ## COG5476 Uncharacterized conserved protein 29 13 Op 7 . - CDS 33896 - 35335 1296 ## COG5476 Uncharacterized conserved protein - Term 35370 - 35420 7.2 30 14 Op 1 7/0.000 - CDS 35426 - 36811 1721 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 36943 - 37002 4.4 - Term 37068 - 37098 -1.0 31 14 Op 2 7/0.000 - CDS 37151 - 37990 884 ## COG3711 Transcriptional antiterminator 32 14 Op 3 . - CDS 38003 - 38443 504 ## COG2190 Phosphotransferase system IIA components - Prom 38667 - 38726 6.8 + Prom 39027 - 39086 2.1 33 15 Tu 1 . + CDS 39140 - 40057 777 ## ACL_1398 hypothetical protein + Term 40130 - 40200 7.4 - Term 40129 - 40168 5.0 34 16 Op 1 . - CDS 40175 - 41062 877 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 35 16 Op 2 . - CDS 41059 - 42075 746 ## COG1940 Transcriptional regulator/sugar kinase - Prom 42113 - 42172 5.0 36 17 Tu 1 . - CDS 42478 - 43458 767 ## Lebu_0003 protein of unknown function DUF1703 - Prom 43524 - 43583 2.0 - Term 43550 - 43574 -1.0 37 18 Op 1 . - CDS 43590 - 43874 143 ## gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 38 18 Op 2 . - CDS 43919 - 44146 205 ## CLH_3192 hypothetical protein - Prom 44181 - 44240 3.8 - Term 44415 - 44446 -1.0 39 19 Op 1 . - CDS 44546 - 45190 461 ## COG0698 Ribose 5-phosphate isomerase RpiB 40 19 Op 2 13/0.000 - CDS 45199 - 46008 819 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 41 19 Op 3 13/0.000 - CDS 45998 - 46762 890 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 42 19 Op 4 9/0.000 - CDS 46783 - 47247 611 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 43 19 Op 5 3/0.000 - CDS 47260 - 47679 410 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 44 19 Op 6 . - CDS 47680 - 50397 1878 ## COG3933 Transcriptional antiterminator - Prom 50429 - 50488 5.2 45 20 Op 1 12/0.000 - CDS 50529 - 51497 681 ## COG3958 Transketolase, C-terminal subunit 46 20 Op 2 . - CDS 51494 - 52243 707 ## COG3959 Transketolase, N-terminal subunit 47 20 Op 3 . - CDS 52297 - 53478 529 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 48 20 Op 4 . - CDS 53488 - 54351 617 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 54556 - 54615 8.4 - Term 54703 - 54740 2.1 49 21 Tu 1 . - CDS 54795 - 54944 113 ## - Prom 55031 - 55090 2.7 50 22 Op 1 . - CDS 55249 - 55887 826 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 51 22 Op 2 . - CDS 55891 - 56838 1042 ## COG1482 Phosphomannose isomerase 52 22 Op 3 1/0.000 - CDS 56822 - 57604 771 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 57713 - 57772 6.5 53 22 Op 4 . - CDS 57810 - 58784 1171 ## COG0673 Predicted dehydrogenases and related proteins - Prom 59022 - 59081 4.7 - Term 59046 - 59086 3.7 54 23 Tu 1 . - CDS 59118 - 59807 611 ## CD3331 hypothetical protein - Prom 60039 - 60098 6.0 55 24 Op 1 . - CDS 60111 - 60770 837 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 56 24 Op 2 . - CDS 60799 - 62610 1917 ## Sterm_0484 thioredoxin domain protein 57 24 Op 3 . - CDS 62638 - 63816 1382 ## COG0492 Thioredoxin reductase 58 24 Op 4 . - CDS 63823 - 65280 1471 ## COG1757 Na+/H+ antiporter - Prom 65336 - 65395 5.3 59 25 Tu 1 . - CDS 65767 - 66390 558 ## + Prom 66582 - 66641 7.6 60 26 Op 1 . + CDS 66701 - 66961 150 ## Swol_2034 hypothetical protein 61 26 Op 2 . + CDS 67026 - 67373 292 ## gi|296443870|ref|ZP_06885900.1| hypothetical protein CloleDRAFT_3987 62 26 Op 3 . + CDS 67428 - 68027 602 ## PROTEIN SUPPORTED gi|229547905|ref|ZP_04436630.1| acetyltransferase including N-acetylase of ribosomal protein family protein + TRNA 68403 - 68479 74.8 # Arg CCG 0 0 - Term 68613 - 68655 -0.3 63 27 Tu 1 . - CDS 68739 - 75350 3587 ## lse_0546 cell wall surface anchor (LPXTG motif) family protein - Prom 75387 - 75446 6.2 64 28 Op 1 . - CDS 75606 - 76046 344 ## 65 28 Op 2 3/0.000 - CDS 76144 - 76788 321 ## COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - Prom 76861 - 76920 2.4 66 28 Op 3 . - CDS 76940 - 77239 66 ## COG0784 FOG: CheY-like receiver - Prom 77269 - 77328 6.0 67 29 Tu 1 . + CDS 78060 - 78905 324 ## Elen_3094 regulatory protein GntR HTH + Term 79068 - 79093 -0.5 - Term 79056 - 79081 -0.5 68 30 Op 1 2/0.000 - CDS 79083 - 79865 989 ## COG0637 Predicted phosphatase/phosphohexomutase 69 30 Op 2 . - CDS 79867 - 80961 1373 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 70 30 Op 3 17/0.000 - CDS 80975 - 83581 2892 ## COG1178 ABC-type Fe3+ transport system, permease component 71 30 Op 4 . - CDS 83574 - 84326 382 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 84362 - 84421 6.0 - Term 85007 - 85054 3.2 72 31 Tu 1 . - CDS 85145 - 85855 379 ## COG1794 Aspartate racemase - Prom 85950 - 86009 2.9 73 32 Op 1 2/0.000 - CDS 86031 - 86669 503 ## COG1396 Predicted transcriptional regulators - Prom 86715 - 86774 4.8 74 32 Op 2 . - CDS 86809 - 87261 376 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 87308 - 87367 6.2 75 33 Tu 1 . - CDS 87596 - 88375 486 ## FMG_0111 hypothetical protein - Prom 88464 - 88523 4.2 - Term 88600 - 88640 -1.0 76 34 Tu 1 . - CDS 88693 - 90096 1738 ## COG1823 Predicted Na+/dicarboxylate symporter - Prom 90116 - 90175 5.0 - Term 90316 - 90362 4.4 77 35 Op 1 8/0.000 - CDS 90363 - 91121 758 ## COG0101 Pseudouridylate synthase 78 35 Op 2 34/0.000 - CDS 91114 - 91914 1184 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 79 35 Op 3 15/0.000 - CDS 91907 - 92767 416 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 80 35 Op 4 . - CDS 92743 - 93570 1069 ## COG1122 ABC-type cobalt transport system, ATPase component - Prom 93592 - 93651 8.3 81 36 Tu 1 . - CDS 94355 - 95674 425 ## COG0534 Na+-driven multidrug efflux pump - Prom 95764 - 95823 4.2 82 37 Op 1 . - CDS 95826 - 96101 176 ## 83 37 Op 2 8/0.000 - CDS 96083 - 97522 793 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 84 37 Op 3 7/0.000 - CDS 97534 - 99384 838 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 99417 - 99476 2.6 85 37 Op 4 . - CDS 99520 - 100359 452 ## COG3711 Transcriptional antiterminator - Prom 100486 - 100545 12.4 + Prom 100432 - 100491 7.8 86 38 Tu 1 . + CDS 100565 - 101014 150 ## Bmur_0604 transcriptional regulator, MarR family - Term 101410 - 101441 -0.8 87 39 Tu 1 . - CDS 101499 - 104009 2956 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 104061 - 104120 8.1 88 40 Tu 1 . - CDS 104380 - 105711 1285 ## SSA_0231 hypothetical protein - Prom 105731 - 105790 8.1 89 41 Op 1 . - CDS 106277 - 107869 1432 ## Mbar_A0080 hypothetical protein 90 41 Op 2 . - CDS 107859 - 108569 184 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 108673 - 108732 5.9 + Prom 108526 - 108585 6.0 91 42 Tu 1 . + CDS 108792 - 109814 988 ## Plav_0415 hypothetical protein + Prom 109822 - 109881 3.3 92 43 Tu 1 . + CDS 109925 - 110449 330 ## gi|160913571|ref|ZP_02076261.1| hypothetical protein EUBDOL_00047 + Term 110458 - 110490 -1.0 93 44 Tu 1 . - CDS 110595 - 111296 996 ## gi|293402531|ref|ZP_06646666.1| conserved hypothetical protein - Prom 111335 - 111394 3.3 94 45 Op 1 . - CDS 111422 - 112003 879 ## COG4122 Predicted O-methyltransferase 95 45 Op 2 . - CDS 112000 - 113178 1515 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 96 45 Op 3 . - CDS 113175 - 114161 1201 ## COG1876 D-alanyl-D-alanine carboxypeptidase - Prom 114181 - 114240 2.7 - Term 114317 - 114358 3.2 97 46 Tu 1 . - CDS 114372 - 115538 1026 ## COG1876 D-alanyl-D-alanine carboxypeptidase - Prom 115630 - 115689 5.0 - Term 115886 - 115934 4.4 98 47 Op 1 50/0.000 - CDS 115942 - 116307 382 ## PROTEIN SUPPORTED gi|205372041|ref|ZP_03224858.1| 50S ribosomal protein L17 99 47 Op 2 32/0.000 - CDS 116335 - 117294 773 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 100 47 Op 3 48/0.000 - CDS 117323 - 117721 503 ## PROTEIN SUPPORTED gi|56961958|ref|YP_173680.1| 30S ribosomal protein S11 101 47 Op 4 2/0.000 - CDS 117743 - 118108 502 ## PROTEIN SUPPORTED gi|212637979|ref|YP_002314499.1| Ribosomal protein S13 102 47 Op 5 . - CDS 118124 - 118240 190 ## PROTEIN SUPPORTED gi|18311362|ref|NP_563296.1| ribosomal protein L36 103 47 Op 6 9/0.000 - CDS 118265 - 118483 283 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 104 47 Op 7 12/0.000 - CDS 118476 - 119213 608 ## COG0024 Methionine aminopeptidase 105 47 Op 8 28/0.000 - CDS 119252 - 119899 750 ## COG0563 Adenylate kinase and related kinases 106 47 Op 9 53/0.000 - CDS 119919 - 121223 674 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 107 47 Op 10 10/0.000 - CDS 121226 - 121666 559 ## PROTEIN SUPPORTED gi|229542184|ref|ZP_04431244.1| ribosomal protein L15 108 47 Op 11 56/0.000 - CDS 121682 - 122194 481 ## PROTEIN SUPPORTED gi|159901442|ref|YP_001547689.1| ribosomal protein S5 109 47 Op 12 46/0.000 - CDS 122207 - 122563 443 ## PROTEIN SUPPORTED gi|167755928|ref|ZP_02428055.1| hypothetical protein CLORAM_01448 110 47 Op 13 55/0.000 - CDS 122585 - 123130 616 ## PROTEIN SUPPORTED gi|218895260|ref|YP_002443671.1| ribosomal protein L6 111 47 Op 14 50/0.000 - CDS 123152 - 123547 462 ## PROTEIN SUPPORTED gi|212637968|ref|YP_002314488.1| Ribosomal protein S8 112 47 Op 15 50/0.000 - CDS 123569 - 123754 303 ## PROTEIN SUPPORTED gi|23097587|ref|NP_691053.1| 30S ribosomal protein S14 113 47 Op 16 48/0.000 - CDS 123771 - 124310 707 ## PROTEIN SUPPORTED gi|229136968|ref|ZP_04265595.1| 50S ribosomal protein L5 114 47 Op 17 57/0.000 - CDS 124323 - 124646 312 ## PROTEIN SUPPORTED gi|167755923|ref|ZP_02428050.1| hypothetical protein CLORAM_01443 115 47 Op 18 50/0.000 - CDS 124659 - 125027 513 ## PROTEIN SUPPORTED gi|222529720|ref|YP_002573602.1| ribosomal protein L14 116 47 Op 19 50/0.000 - CDS 125045 - 125305 338 ## PROTEIN SUPPORTED gi|15900154|ref|NP_344758.1| 30S ribosomal protein S17 117 47 Op 20 50/0.000 - CDS 125322 - 125522 205 ## PROTEIN SUPPORTED gi|20808652|ref|NP_623823.1| 50S ribosomal protein L29 118 47 Op 21 50/0.000 - CDS 125525 - 125941 557 ## PROTEIN SUPPORTED gi|222150452|ref|YP_002559605.1| 50S ribosomal protein L16 119 47 Op 22 61/0.000 - CDS 125945 - 126736 581 ## COG0092 Ribosomal protein S3 120 47 Op 23 59/0.000 - CDS 126748 - 127083 341 ## PROTEIN SUPPORTED gi|126680609|gb|ABO26531.1| ribosomal protein L22 121 47 Op 24 60/0.000 - CDS 127099 - 127377 413 ## PROTEIN SUPPORTED gi|167755916|ref|ZP_02428043.1| hypothetical protein CLORAM_01436 122 47 Op 25 61/0.000 - CDS 127397 - 128230 1171 ## PROTEIN SUPPORTED gi|167755915|ref|ZP_02428042.1| hypothetical protein CLORAM_01435 123 47 Op 26 61/0.000 - CDS 128290 - 128586 286 ## PROTEIN SUPPORTED gi|167755914|ref|ZP_02428041.1| hypothetical protein CLORAM_01434 124 47 Op 27 58/0.000 - CDS 128586 - 129215 671 ## PROTEIN SUPPORTED gi|212637955|ref|YP_002314475.1| Ribosomal protein L4 125 47 Op 28 40/0.000 - CDS 129219 - 129905 630 ## PROTEIN SUPPORTED gi|212637954|ref|YP_002314474.1| Ribosomal protein L3 126 47 Op 29 . - CDS 129919 - 130230 396 ## PROTEIN SUPPORTED gi|192813593|ref|ZP_03042253.1| ribosomal protein S10 - Prom 130348 - 130407 7.2 127 48 Op 1 . - CDS 130528 - 131256 673 ## COG0084 Mg-dependent DNase 128 48 Op 2 17/0.000 - CDS 131246 - 131986 223 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 129 48 Op 3 21/0.000 - CDS 132010 - 133008 1204 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 130 48 Op 4 . - CDS 133005 - 133772 877 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - Prom 133916 - 133975 7.0 - Term 133788 - 133814 -0.6 131 49 Op 1 . - CDS 133978 - 134289 482 ## COG0393 Uncharacterized conserved protein 132 49 Op 2 . - CDS 134270 - 134476 144 ## gi|293402494|ref|ZP_06646629.1| conserved hypothetical protein - Prom 134511 - 134570 2.7 - Term 134537 - 134574 5.7 133 50 Op 1 30/0.000 - CDS 134590 - 135774 1422 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 134 50 Op 2 51/0.000 - CDS 135843 - 137921 1825 ## COG0480 Translation elongation factors (GTPases) 135 50 Op 3 56/0.000 - CDS 137937 - 138407 545 ## PROTEIN SUPPORTED gi|77406278|ref|ZP_00783345.1| ribosomal protein S7 136 50 Op 4 56/0.000 - CDS 137937 - 138407 660 ## PROTEIN SUPPORTED gi|212637950|ref|YP_002314470.1| Ribosomal protein S7 137 50 Op 5 . - CDS 138433 - 138855 623 ## PROTEIN SUPPORTED gi|56418636|ref|YP_145954.1| 30S ribosomal protein S12 - Prom 138949 - 139008 7.8 + Prom 138979 - 139038 8.1 138 51 Tu 1 . + CDS 139073 - 139885 1048 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 139998 - 140034 3.5 - Term 139986 - 140022 7.3 139 52 Tu 1 . - CDS 140029 - 141381 1164 ## COG1114 Branched-chain amino acid permeases - Prom 141467 - 141526 5.4 Predicted protein(s) >gi|312957890|gb|AENW01000002.1| GENE 1 415 - 1059 633 214 aa, chain + ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 63 191 25 154 352 93 36.0 2e-19 MNNLEFALEMKNKRLASGLSQGELASLTHVSRYSINRFENGKANASKETQNIILRCLNYY VCDKPFYLLVDYLSVRFPTTDALEVIRKVLGMKADYFIHYDYGYYGYKEHYAYGEIKVMA SDDEHMGVFLELKGAGSRNMEYVLQAQKRDWYSFLNRCLDCGGVIRRFDLAINDMCGLLD IPVLSEKYKNGGADCRCKNYENVQGGKLSGKTVI >gi|312957890|gb|AENW01000002.1| GENE 2 1332 - 1556 173 74 aa, chain + ## HITS:1 COG:no KEGG:CD0381 NR:ns ## KEGG: CD0381 # Name: not_defined # Def: putative conjugative transposon replication initiation factor # Organism: C.difficile # Pathway: not_defined # 3 68 305 370 370 69 43.0 3e-11 MNPVPVNMERTLQWLERQVMPSIVMIEEIDRLTGSNYMKMIDECTHLSEKQEMLVEQMCT DIADVIESEGVFYE >gi|312957890|gb|AENW01000002.1| GENE 3 1575 - 1754 193 59 aa, chain + ## HITS:1 COG:no KEGG:SMU.1031 NR:ns ## KEGG: SMU.1031 # Name: xis # Def: putative transposon excisionase; Tn916 ORF1-like # Organism: S.mutans # Pathway: not_defined # 3 59 11 67 67 92 89.0 4e-18 MGKYTLTIEEASKYFRIGENKLRRLAEENKDAGWLIMNGNRIQIKRRQFEKVIDKLDAI >gi|312957890|gb|AENW01000002.1| GENE 4 1833 - 3026 624 397 aa, chain + ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 149 392 145 377 387 83 31.0 6e-16 MKEKRRDSKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSL RELEQQIRRDIEDGIDSTGKKMTLCQLYAKQNAQRANVKKSTMKQREQLMRLLKEDKLGA RSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFYIAIQDDCVRKNPFDFKLSEV LENDTKEKVALTEEQEQALLSFIKTDNVYHKHYDDVLILLKTGLRISELCGLTVADIDFK NEVVIIDHQLLKSKEQGYYIETPKTKSGTRQVPLSKETIQAFQRVMKKRPKTDPFVIDGR SNFLFVNHKGKPKVAIDYNALFVRMVKKYNKHHMDNPLPHITPHTLRHTFCTRLASKNMN PKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA >gi|312957890|gb|AENW01000002.1| GENE 5 5127 - 6755 557 542 aa, chain + ## HITS:1 COG:no KEGG:Ccur_00810 NR:ns ## KEGG: Ccur_00810 # Name: not_defined # Def: Cna protein B-type domain-containing protein # Organism: C.curtum # Pathway: not_defined # 10 536 12 474 480 115 24.0 5e-24 MKKEKILSFIVSFCMILTMLIFSGIEAIAVGSLNPSFSQSFTVTNLTEGTHVEVLKTVDL NLDSDGNFNMPVLTWNDSVKNWVSDKFPQYIDKSTKEVTDTFQKLGSNSAEANTFWQKMT AAYYQGKINFADKKDATADGNKNVTINGNGWGGYLVLAENPNNTGIMYKATSVNVLPAKQ KDGSYENPKESITLVMKQDKEPGFEKEIPDISEITTGIGKIVNYRLNAQIPVYPADSIYK IFEISDQGGKGLKLVPDSIVVSLHADGSDSMSKITDYTLTKTENAFKIVVKESFLENHQG EVVYVLYQERITEEALELDEIENTASLKYNPNPYKNDTYEIESKKKTYTYEINFDKKDEN GTTYLTGAVFQLQDADGDVLQFVQDTNDLHHYIFYGSADAFDTAVTPVSDIEISKESSIQ IDGLDTGTYRLIETKAPEGYVKPTGYIEITLEDTIDENSKNVPDGKLDKIEITNNGTYEI INNATTGSGSFSFIVKNRTPEDFNLPVTGGTGTLMFTLGGIVVMGGAVLLYARNRKCRSN AK >gi|312957890|gb|AENW01000002.1| GENE 6 6763 - 7587 232 274 aa, chain + ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 38 250 8 215 251 192 45.0 8e-49 MFIQKIKSYAPILIFLIGASIFLYPSIANKYALHVQSKVIHTYTATMNEKSKEEIKQIWK QAVEYNDNLAGDPVHDPFVLNSGYVLPENYLHTLNILEDGVMAYIEIPKIHVNLPIYHGV SEDVLAKGAGHIEGTSLPIGGKNRHSIICAHRGLPSAELFSKLNELKKNDLFLIHVLNRT LAYKIDQVETVLPDHINIYMMLEKDKDLVTLMTCTPYGVNTHRLLVRGERYDYIPEGKEI VQEKKGSMKIYFLFGTIIFLGISIFIRSHLRRNL >gi|312957890|gb|AENW01000002.1| GENE 7 7584 - 8417 226 277 aa, chain + ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 17 276 1 255 279 100 26.0 3e-21 MKKWEFRFIVLLLLLGLGILSFPKIHSFFTTIEQKQKIQSFKETIANQSDKDALYQQMKQ YNEKIYKEHQKDLKDAWSYSQNTFDLGILNLDMNIIGYIEIPKLDVQIPLFIGANYNNLN KGVAIMSQTSMPIGGENTNCVIAGHRGGYHGEQLFKNIENLAIGDEIRITNPWETLTYFV IKKIVIEPNEIEAVKILPNQDMITLFTCHPYGMETQRYVVYASRKSIYNDIELPKGVTYT SSRKEIAIEKTLNNCLLFASGLLAVILIIESIRMNKM >gi|312957890|gb|AENW01000002.1| GENE 8 8785 - 13020 1455 1411 aa, chain + ## HITS:1 COG:no KEGG:FMG_P0126 NR:ns ## KEGG: FMG_P0126 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 35 1097 103 1156 3175 166 23.0 5e-39 MKDFWKRILVCIVVSAMFFTSTGFGIFQIVASINNASPIENFSIEWKTQANGKNIIYDET GTVVTLKPEFNDRDAAGTSIQAEVHLSLSEAANISENQLEIRLPSTIFYNRSQAACGEYE IGFGSGASDGSFAYRVDEETGELVVYNTSVINDAMVVKFDILYKSGLPSEIVRGYEKELS ANIKIFNDDSSIDYEQITNRLTLTYQTESDIHRVELTKSKKYETWNKKWGEEPEDAKDYF FVEWKIDTTVRSTSFTMPFKLIFTDTLSNQGEVVGWTDYHWGMDMIMNSKYYQSDHPVFQ IDVTKPSKIKNSDSYDFHIGYVLIKYPRSELENTKEIKNEITVRLENLYPEDGSYSKEVK DDAMYTYVDINFRYPPGNYGLEKEYSGGTSSQLLGYLYAIEQAAVNAKLPATNDFRNTST ATGGILTLDGDGNNIENYGKKSYSVEVTDDFVALENERLTDGEYYISSIEVTDKQYNYKM NEEDGSGGVEEDKNYDEWTPITIEYQQGIHGEWKELVTGKPFTDRISRKSYHLSFPDGTT KDYGAISVKELPEGTTGVRAKRETKYHKSDLDLNVTIGLYATDKIKQTALNKTSLTLTNI STYVVKDSNQSWVNPYAEMSIGGTLKDEVMKRDKLVFGNNDQYGQHDRAAVTLKNPILKN NITKEASKVINEPSNSRFKINYTITGGEYLDREFGNDPFYATKEELKNTNMVKEQRSAIF YDLLPLGMYADYSSIKSYALELGSYGRTLKGEQFEHTVETIDNYKGTGRTMLILHITVPE TIENLFYEATYGKFGTGFYITYDAYYPWESLLDFGNIPLNSVAYKSGAGEIFKGFADDGG DKITDKDILKDVDEDGKFGGDLVKDTLYAEARVQISGVVNSELSFSKRVKSDGDIAYSKT TSTIGGGAYSYQLRIGNEKNIKTKGLIFYDILESDFKDREYWQGTLVGVDTSQAQLKGIS PVVYYSTKDNMKLSSSMNGEMIDDANINDPTIWSTTPPNDMADVTAIAVDLSKDTSGNEY ILDSEQTVLIKILMKAPTQHVKEYIEKDAKAYNTAWVRNQTLLASGGVEKSETLQTLETV VSLRNPDIEIHKKSDPETGTLDAPTQVKNNDILTYDVSVENKENAIPLKDVCIEDPIPQG LTIDFENIKWYPGNDVSQMKLVSESDEVSVTRDKQTLRFKILALLAGDVVHFVIPTTVDE SEDAVVFINQAKITNINGAAYEKESEITYHEKKSELVDFAFMKTDKDKTVLANAGFVLYQ LTCSDATHNHADELLKVNDDGELSGQIQTNCWKQVEKQVSDEHGNVSFQNLKKSLEYRLI EYRAPEDYVLPNGQWILHFDYVKDAFEINSIHRPPAFEIHNGVLILVNYRLGEIPITGNS GTQSMLFTGAAFMLIAGIWIIYKKKTRKEKI >gi|312957890|gb|AENW01000002.1| GENE 9 13580 - 13885 96 101 aa, chain + ## HITS:1 COG:no KEGG:Mbur_0365 NR:ns ## KEGG: Mbur_0365 # Name: not_defined # Def: putative transposase # Organism: M.burtonii # Pathway: not_defined # 2 71 255 321 388 62 44.0 7e-09 MRYVGRPAMAESRIIKYSKTEDTIEWFYHDHKDEVKHIVKEDSKSFIKKLLIHIPDENFR SVRYYGFYSNKAGEELDHVHELLGDKKSRDYSKETRKKKRC >gi|312957890|gb|AENW01000002.1| GENE 10 14002 - 14175 206 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDYTEKSVSMKCKHCGYEEDVPQWVLDELNEFSDDKSYQMICPECDDTMFEKGTLS >gi|312957890|gb|AENW01000002.1| GENE 11 14438 - 14578 92 46 aa, chain - ## HITS:1 COG:no KEGG:Apar_0207 NR:ns ## KEGG: Apar_0207 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: A.parvulum # Pathway: not_defined # 1 46 236 281 299 64 56.0 1e-09 MVMFKECLKHDIVLFIIEDMHKSFYYRGLENFKTDTAYLMDTCLNA >gi|312957890|gb|AENW01000002.1| GENE 12 15012 - 15503 208 163 aa, chain + ## HITS:1 COG:CAC1325 KEGG:ns NR:ns ## COG: CAC1325 COG1284 # Protein_GI_number: 15894605 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 155 12 164 285 59 26.0 3e-09 MREVLRIIAGNICITGAYAFITVPCHIVNGGITSFSMILHNFINMDISFFTNAITILLLI LCFFQLGKSFLLKSLLSSICYMLFFSIFYALNIVFPLPMPLAVLMASVMVGFGYYLCISS NSSTVGFDVLAIILHNKNDSFPIAVTMRYINVIVVLLGFASYG >gi|312957890|gb|AENW01000002.1| GENE 13 15653 - 16534 571 293 aa, chain + ## HITS:1 COG:MJ1311 KEGG:ns NR:ns ## COG: MJ1311 COG1082 # Protein_GI_number: 15669501 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Methanococcus jannaschii # 137 264 138 260 293 59 30.0 9e-09 MKYGITTEELSRSYCEQKISKVYKEIGFDAVDYSYDIHAVPNSVYDQDDYLDYAKNLKLA AVEAGIAIHQMHAPLYHRRIDMPLTKEDQQEEKFLKKMTKRGFEIAEILGCHYMVMHPRK MRFYDQIGAKEKARSYNLQMFREYEALARKHHVQIALENMFSYHPQTHMPVDTVFRTAEE IVSYLEELNSDVFVACLDTGHANINGISAAHMVKVLNQHLKVLHVHDNYAALDQHLLCGY GTIDWNAFSQSLHDIRFDGVISLETSAMCTHLPEISCLDYARLAFRTVSNLVK >gi|312957890|gb|AENW01000002.1| GENE 14 16565 - 19357 1583 930 aa, chain + ## HITS:1 COG:lin1832_1 KEGG:ns NR:ns ## COG: lin1832_1 COG1221 # Protein_GI_number: 16800899 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 18 384 4 354 432 293 43.0 1e-78 MRIDKIMRVIDEHCQKDRLNDIRQNANGISVYEIAEALQLLRNNVNADVNKLFQEGKVIK ICGDKIYRFYSQQHFSKITGKHLQPQTTCNYLQELLEDMQGSNDQDDPFTQLIGFDGSLR NAILSAKAGILYPGGALHTLLLGESGVGKSLFAEKIFMYGKKHGIFNKDGQFVVFNCADY ANNAELLLSHLFGSIKGAYTGADSTREGLLKRSDGGMLFLDEVHRLPPEGQEMLFYFIDK KKYRMLGEANCEHSANVALVMATTENPDNHLLTTFLRRIPMVIKIPSLKEKSLQEREQMV LYLYALEAAVICSDIIIDKDTMTALILYHPKGNIGQLKNDIKLSIARSYLEMRNNKESEL HIRKYTLSHQVSDGLIDQDIEQRKEIEKMLIRDTYTVTPFRAEPAVMPASMFEFPVFDTT QSDIQTSFEEYVDKIAASLEQDSPPSFIIDNEIREIMTFIHEWILQNMQILIERRQSAAL AFYLKNIRDYQTNAYLHDEYTLECEIAYIEKARSLIRSIEQRFNLRITSEGVHTLACILK TFKSNSSEICSISMFVVAHGNSLATNIADVVNELLSIDYVIAQDMPLTKNVNQIIEELIE KICKEPLQNDIVLFVDMGSLMSLEETLLQRCNYNIVVIPTVHTLLVLDAARKAMFMQYPL SNILHDVMRMNQKVDQTLEHHIRSHIGQYNEKIIYTICYSGDGTAHYLEKYLKDMMEQAG IFNIEILALSNDSLIKIRSIIEETSKHKEVLCIIGNVDPGVHEYPFISIEDILLGDGVKR LFNSIGNIEFVNNQDVIKCFERNVFVDVAFESIDKYLMYLNSKKLSPLIMDFVKGLENEL DCTLTNRTLTRLIVHTACMVERLLFHEYSFEQNAGTSEYLKTQKRLHTAVSKNLQGIASA CSITINQEECYYIIQILMEDDTLAEHIVFS >gi|312957890|gb|AENW01000002.1| GENE 15 19467 - 19904 338 145 aa, chain + ## HITS:1 COG:SP2164 KEGG:ns NR:ns ## COG: SP2164 COG2893 # Protein_GI_number: 15901974 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 6 128 3 126 143 65 29.0 2e-11 MMMECNIGILLASHGEYCHGAKNSLEMIIGDCPDLLCVSVTPSMNNEDVQVQMREAYELL KKECSEVLIFTDLLCGSPNHAAVRLMMSREDITVVTGYNLAILVELVNRRNTSDLKVQEL LNGIEDTLASSLRIMTKEGEWYHGN >gi|312957890|gb|AENW01000002.1| GENE 16 19894 - 20376 510 160 aa, chain + ## HITS:1 COG:SP2163 KEGG:ns NR:ns ## COG: SP2163 COG3444 # Protein_GI_number: 15901973 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 156 1 156 156 124 39.0 7e-29 MGIELIRIDDRLIHGQIATTWINNYSIEQVLIINDQILTDKMQQSVISMTAPVNVKVKVF GVDAFLDIYKKTSIQRRTMIILTNSIDAYRLAKGGVDFKVLNVGGMRYENGRVKIAKAVS VTEREREAFEQLLHMGIDVQVQMVPRDELHDMKEILTNTK >gi|312957890|gb|AENW01000002.1| GENE 17 20393 - 21169 721 258 aa, chain + ## HITS:1 COG:SP2162 KEGG:ns NR:ns ## COG: SP2162 COG3715 # Protein_GI_number: 15901972 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 258 2 257 257 178 39.0 1e-44 MLVKALLVAFWAGLCSLDDGGMQLQIRKPLLAGTITGLILGDLTQGLIIGGTLELMWLGV NSVGAYTPPDITGGAIIGVTVGITSGGGVAAGVAFAVPAATLILQLIVLLQTYLSVHIHR AEAAAVAGDFDKANRWHLYSGILLFFARAIPCYIAVYIGNTVLSDFIAWLPKFIITGLNV ASGIIPAVGISMLLTMMLKKDMWMYLVGGFVFAAYLGLPVLGVSLIGIVFAGIHDYNYVQ RKKLETSNTMELEGGIDL >gi|312957890|gb|AENW01000002.1| GENE 18 21166 - 21984 640 272 aa, chain + ## HITS:1 COG:SP2161 KEGG:ns NR:ns ## COG: SP2161 COG3716 # Protein_GI_number: 15901971 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 8 271 2 265 266 212 43.0 8e-55 MTDTKFEMTNKIYREMFINHLTYQWGWNYERQQADGCLFTLTPVLKRIYKDAPVEAKERA IKRHLEFFNTHATLAPLLFGLIAALEVNTPEDEKDSITSIKTGLMGPIAGLGDGLFWFTL WPICASIGATMAVTGNIFGAIFTFVVFNILNQGMKWFGFRIGYTKGMEIINSGSGDEVIK RISGAATVLGLCVAGCLVSTTVKVNVPLVFASGEGKIVVQELIDKIMPCFLPVLVTVFCY WRLKKTNGKEAVLLIFGIMIVSIGLTYLGILG >gi|312957890|gb|AENW01000002.1| GENE 19 22332 - 24014 1429 560 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 138 543 345 749 776 186 31.0 9e-47 MKSGKEILAEFQLDPWMLYDTIVNSTDDYIYLVNMQEDRALISENMLQDFDLPDLIVPGL IPLWGDLVHERDRQRFDDSITAMLNGETDEHNVEYQVRNRKHEYIWVICRGLLKRNDRGE PIFFAGIVSNLENKGKIDSITGLFTQTACENSVTQLLEHKRNGGILLLGLDDFSHINELN DHIFGDAVLRQFSQTMQRLLPASARMYRFDGDEFAIVYEQATRKQVRELYKIIHAYCNRR HFIDDIGYFCTVSGGIAMFWEDGDNFLDLIKYADNALEASKYRGKNQCTQFSHELVQIKR RRLSIANQLQSSVLRGMQDFYLVYQPLINASSMKVEGAEALLRWSSSEYGNVRPDEFIPI LESAGLIHQAGKWVFQEAVHTCKEWVKENPGFVMNVNFSYIQMLNEDLLPFIRRTLKQAD LSAKHIVIELTESCFVTEMDALKRSFQQLREMGIRIAIDDFGTGYSSLGMLSQMPADIVK IDRLFISSIHENSFHQSFINAVIQLCHSVGIRVCVEGVEEQEELKVVRDIQADNIQGFYF SRPVEKRTFHDRFLDLQMVL >gi|312957890|gb|AENW01000002.1| GENE 20 24260 - 25057 896 265 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 260 4 263 265 301 57.0 1e-81 MKTVVTIAGTDPTGGAGAQADLKTFMAHEVYGMSILTALVAQNTTGVTSIMNVTPKFLKE QFDCVFTDIRPDAVKIGMVSQPELIAVIVEKLKQYAVERIVVDPVMVSTSGSRLLENTAL ELLQTKLLPLADIITPNLPEAEALSGIRICNHQHMRKAAAMIAQDYDGYILIKGGHSMNR ADDLLVHKDEAHWLSSEKIDNPNTHGTGCTLSSAIAGNLALGYDMISAVERAKAFISGAL RDGLDLGQGSGPLNHCWNIKQKQPL >gi|312957890|gb|AENW01000002.1| GENE 21 25060 - 25698 831 212 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 209 5 213 215 100 27.0 3e-21 MKGYIFDLDGTLVDSMWVWEDLAAVYLQTKGIKAEENLSKELQLMTMTDAIRYLKEKYVI QDSLAQVRTEVYAIVRRRYRQEVAAKKGARACLERLHTQGMRIGVLTACERVCAEEVLKR NGLLEYMDFVASCEELPYDKQDGRLFELMPAMLHTDKAETMFVEDALHAVQTLKTHGFHV TAVYDAASKAHWKEICMQADAAFLSLDDLKGE >gi|312957890|gb|AENW01000002.1| GENE 22 26088 - 27587 1617 499 aa, chain + ## HITS:1 COG:BS_ypwA KEGG:ns NR:ns ## COG: BS_ypwA COG2317 # Protein_GI_number: 16079266 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Bacillus subtilis # 4 494 7 499 501 342 38.0 8e-94 MDLEAFFHEYKEKKNAYQMALSTMYYDQATIAPKNGIPYRNRMTAILSGEAFDQMADKKS IQRIEELARQENVSAERKKELQLLLRELNELRVLPREVYVEYRRTIADSEAAWHEAKEQD DYQLFKPHLISVIEKQKEILSYVTDKKSDYDFMLDSYQINTDIAYYDRFFDAIRKELLPF LQKLLKEGTPIDDSLLFTAFDIKEQEAFMQELMDYMKVNDRECYMTTTEHPFTDFFSAHE ARITTHYHEHNVMSAIFSTIHEYGHAQYGLQVKKAYEGTSLFSGIGTAMHESQSRFMENH IGRNRAFWEVNYPKLQQHFPKQLQDVSLDDFMRMINVSRPSFIRTEADELTYPIHILIRY ELEKEIFNGTADYDNLDTMWNDKYEEYLGIRPEHDRNGILQDMHWGGALLGYFPTYALGS AFAAQFYHQMEQDMDVEEALRSGAFEKISGWLKENIHQYGAFKDADELMMDVCGESFDPK YYIEYLKNKYAQLYQISAD >gi|312957890|gb|AENW01000002.1| GENE 23 27964 - 29043 840 359 aa, chain - ## HITS:1 COG:lin0328 KEGG:ns NR:ns ## COG: lin0328 COG2723 # Protein_GI_number: 16799405 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 1 355 108 456 463 263 41.0 5e-70 MTLFHYDLPEAIAKEGGWENRAIVDAFAEYARVCFTAFGDRVKLWVTINEPKYYAYCSHM VGNYPPNHRHDFNRYFTTVYHEAVASAKAVAIYHSLKLNGSIGIVHDSSNVEVAPDTKEK ERVHMIADLFYNRIILDTACKGEFPGALIPLLRKYGIDTSYIKFEDMLVFLQGKVDFLGL NVYNRFYITDYSAGETEVFHNNKGAGSNAKEGIRIRDWYETAIDPNTKRNLWGREIYPKC MYNTLMEIKERYGDIPVYITENGHGCYEKPNDEGYVEDDERIEMMQGYIDYMLKAMEDGC NVRGYYAWSTMDLYSWVNGYEKRYGLVRVDFDDHNRRYPKKSYYWFKKLIEDYRKAEEE >gi|312957890|gb|AENW01000002.1| GENE 24 29087 - 29389 267 100 aa, chain - ## HITS:1 COG:lin0297 KEGG:ns NR:ns ## COG: lin0297 COG2723 # Protein_GI_number: 16799374 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 7 99 11 103 478 111 53.0 3e-25 MQNIEKQKFLWGSATAAYQCEGAWDADGKGLGEWDVFSHGNPLNINGATGDVSCDFYHHY KEDIDMLKAGGQNTYRFSISWARILPNGRGAVNQGGDRFL >gi|312957890|gb|AENW01000002.1| GENE 25 29468 - 30136 308 222 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 11 203 6 195 227 72 27.0 6e-13 MKKRAEKQPYLYLRLIEMLLGILITAIGLSCMMKSQLGQTAITAFTQNLTAITGIKSGTV LIIFFISCTGAQIVILKKQFANIQYLQIPLALLQGKIVNLICYDVPGLCDWYPQTYIGKW LCIFSGILFCSYGVAVLFHADLVKNPFEELAMVISKRLRMEFCIFRTRIDIVFMLLSLFM ILCSHLDFTTVREGTWVCMLLLGKSMKYTFPFTAKTWYIIKK >gi|312957890|gb|AENW01000002.1| GENE 26 30133 - 30945 493 270 aa, chain - ## HITS:1 COG:lin0196 KEGG:ns NR:ns ## COG: lin0196 COG0561 # Protein_GI_number: 16799273 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 7 267 3 265 270 89 25.0 1e-17 MKPEKLRMVVCDIDNTLVVKHHALTKKAKEVIRKLRKRHIVFGLASGRSLAEVRRLLHRW GLEDVDMLICMNGSTLWDNLTKEEETYYKLKKEWIREIIEKMSVFTCNPVIYRNACIYCK EMDEVVKQSATSAEMEAMEVTDMKVFYQEENAKIMFRVNEEDMLQIEAYLTAHPSKDYHF FKTQSTLMEFSHRRVSKAYALKKFCEKHQISTAEVMAFGDTTNDHTMLEPSGVGVCLKNG SDDTKAIADIITDYPCDEDGWARFMEMYAE >gi|312957890|gb|AENW01000002.1| GENE 27 30976 - 32349 1482 457 aa, chain - ## HITS:1 COG:no KEGG:YE2832 NR:ns ## KEGG: YE2832 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 2 454 7 461 469 532 55.0 1e-149 MIKLKEIEAPKPEEGLIPVMLSDETMQNRKARLLENMQKDGFDAVVVYADLEHGSNFEYL CGFLPRFEEALLILHANGKAFMVLGNENLNKAGKARIEAVPIHMPHFSLPNQPMQTEKSV AQILASCELEDAEKIGLIGWKNFTSHVEDNHLLFDLPYFLVEALKTVCGKAQFANAAYLL IGENGVRTTNNANEFAHYEYGAALAGNCILKTMDRLKVGKTEMEMAETLAADGQRHSVVT IMATGARFEKANLYPGNKQIQCGDKISITTGFKGGLQSRAGYAVECAEQLPEKEQDYLKA VAIPYFQAVKTWLETIEIGINGNDLYEAVETVLPKEDYGWTLNPGHLCADEEWMSSPIYP QSEETLQSGMLFQIDIIPSVNGYGGVSCESGILLADEQLRKAIAKEYPAVWERIVKRRAY MQEVLGIRIQEDVLPTSMATAYLRPYLLKKEMALASV >gi|312957890|gb|AENW01000002.1| GENE 28 32406 - 33848 1274 480 aa, chain - ## HITS:1 COG:SMb21161 KEGG:ns NR:ns ## COG: SMb21161 COG5476 # Protein_GI_number: 16264575 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 478 1 461 477 160 27.0 5e-39 MKILAAKFVLEANAHVPMKCDMENVALSYGKEALSHMQLGNVFDAEDIDLIPVICADAGC SGVMKTSCFMYIEQRILQAVKEHVKDLDGIYLHLHGASFVEDIGSGEHHLLRCIRRITGP YLPIAISCDPHGNLTKEYVENATILRSFREAPHTDIPETVQFVCRALVQEIRNRMNMRPV YRKLPLILGGEQSVSADEPVRSINQFMNELEKDERILSCSWHVGYLRHDAPEAGCGIVVV PSAQDFQQYAEETADQLMNYVWGKRHEFHYTGLTREPQEALQAALDFSGKPVFLTDSGDN VTSGAMGANTFILRQVLACEHLTKRFLFAAINDPAAYQLLEAHDVQEQVHLRLGMDMDEC TAAVELDVTILAKGRQEGTHMYGEEGDYGGLVSVSVKGKPITIVVTDNNHSFVEKHQMDA CGIDWDDYDVIVVKQGYIHPELKEKGKLCIMSLTDGATLQDTKRIPFKLIMRPMYPLDDM >gi|312957890|gb|AENW01000002.1| GENE 29 33896 - 35335 1296 479 aa, chain - ## HITS:1 COG:SMb21161 KEGG:ns NR:ns ## COG: SMb21161 COG5476 # Protein_GI_number: 16264575 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 477 1 461 477 179 27.0 8e-45 MKVLVGEFVTESNANIPTICTIKQYDIGLGEDCIQKMGIREVFERNDVTLIPSIYANAGA AGVVEKSAFTYIEHMFIDTLKKNLHEIDGIFLMLHGASEVEELGSGDHHILKELRKLAGP YLPIAIVCDPHGNLCKEYAESATILRSYRESPHTDADETMEKVAEMLCELLKKRRNIHAV YHKLPLILGGEQSVSADEPVLSINRYMDELEKDDRILSCSWHVGYIRHDCDVAGCGIIVV PYSEQDLPYAQEAADRLAAYVWEKRHEFHYTGLTASPSKALQMALDFQDKPVFITDSGDN VTSGATGWNTGILRQVLQTETTKKFLFATICDPAAYQTLSACKTGEELSFTLGVGFDELS SAVELDAVVKSSGNLTGFMMHNHTSVFGHCVNVHIKGTSIDIMVADTGWAVCELHQFVSA GIDVDAYDVIVVKQGYIFPDFKAKGKLCVMSLTEGATLQDTARLPFKRIMRPMFPIDDI >gi|312957890|gb|AENW01000002.1| GENE 30 35426 - 36811 1721 461 aa, chain - ## HITS:1 COG:ascF_2 KEGG:ns NR:ns ## COG: ascF_2 COG1263 # Protein_GI_number: 16130622 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 122 449 23 358 392 143 29.0 8e-34 MAKYTEMAKGVLTNVGGIENITFVEHCATRLRIHYKSKNKVNVEALKTVDRVVGLVEKAG QVQIIIGPEVNDAYNEFLDVSGFKVTDEQPSVGNDSSDDEQEKNFMYYLNVFGNKCAAIF MPIIPAMITGGLILAVKNLLVNYFGMSADGGTATLLLNIFTAGFSFFPIWIGYSFAKSLR MEPIMGGFLGAVLFVCSDAKGLDFLGLSVPTVTYAGSVFPIILGVAVMYFVDKFLKRVIP EMFVYFLKPILTMIIVVPITLIVLGPIGTMLSNSVGAAIQAVMSVAGWIAMPILSALYPY MVMLGLDKAFTPIMAQSIAEIGYDPFNMVMGLVSNLCIGGSALAVAFHLKDKAKKGMISS FGITALCGVTEPAFYGSLIMRPKCLIGTAIGAVCSGLIAGIFGLQNYVVGGCPGLLSFFY FLPADGSTGNIILYFAVAVVAIVVSFVATSYILKKTDTVKE >gi|312957890|gb|AENW01000002.1| GENE 31 37151 - 37990 884 279 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 278 1 277 277 175 36.0 7e-44 MQIKKIYNNNIAMVKNEAGDEVILVGKGIVFGLKKGDEIQAEKAEKKFELKGEAKHKFEK MIQDTPIDYILVSEEIIAYFKEHSTKALNDGIYVTLTDHIANTIERIRMGIDFDMTMLLN VKSLYREEYKLALHAIEMLRNAFHLHIDDNEANFITLHIVNAELTSNMMEIYTITSILES INTIVLQSFQVDVQDNYDFDRFLIHCRFFVQRIVNAEAGVHQSTANQAIFQMMKEQSVQQ YACVNQIAEMLEKKYAYSVNDEEKLYLLIHLNKLTKDSV >gi|312957890|gb|AENW01000002.1| GENE 32 38003 - 38443 504 146 aa, chain - ## HITS:1 COG:SA0183_3 KEGG:ns NR:ns ## COG: SA0183_3 COG2190 # Protein_GI_number: 15925893 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Staphylococcus aureus N315 # 8 144 1 141 143 119 46.0 1e-27 MEVLCSPVNGKATMLENVHDEMFSEKMLGDGIAVIPDENELRSPVEGTVTMIYETQHAIG IQTDLGTDILIHIGIDTVQLHGVPFQTKAKVGDRVKQGDLLTIVDWDMIRNKNMDVIVPI IVTNKRVDQMKTNGDIRVGEPLFEIV >gi|312957890|gb|AENW01000002.1| GENE 33 39140 - 40057 777 305 aa, chain + ## HITS:1 COG:no KEGG:ACL_1398 NR:ns ## KEGG: ACL_1398 # Name: not_defined # Def: hypothetical protein # Organism: A.laidlawii # Pathway: not_defined # 18 305 16 315 324 159 35.0 2e-37 MKSSLEQEFALHLPKGNKPWFEGWYVRVQTKEISFAIIFGLQISNAKKSAFIQFLDTHTK KSRYVEYPWKAVTIQQHPFVLNIRGNRLSMNSVTLRLPQLQADLLHSSLTPLHTSPYAPT IMGPFSYVPMECVHSIISLRHTVSGTIRLNNRCFQIHGSGYMEKDRGTSFPSAYAWFQSN NCEDTASCFFFSLAHIPFLTGSFQGCICVLMVHEKQLCFATYLGCRATEDRKNQQIVLKQ YPLELRIRLSGEKGHTLASPKQGAMQGRIQETLRGEAFVTLLSKGRHIKSWHFTQGGLER AGIDI >gi|312957890|gb|AENW01000002.1| GENE 34 40175 - 41062 877 295 aa, chain - ## HITS:1 COG:BH2283 KEGG:ns NR:ns ## COG: BH2283 COG0613 # Protein_GI_number: 15614846 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 5 291 8 284 290 102 29.0 9e-22 MKKLDLHMHSKYSDDGQYEPIELLKMCKAAGLDMMAIADHNSVRGSRIALRHQQEYGITC IPAIEIDAVSQDVGYHILGYGIDVHNPVFDEIEEHVASQEREASKRRRQLVRDMGIAFDE KRIQELSPGGITTGEAIGEAAMEYDVEKKNPLLQPYYPGGERSDNPFVNFYWDICAPGKP AYVEIFYPSVSAIVELLHQQNALAIVAHPGMNAKEQMDRIHDLLQLGVDGFEVFSSYHSE QQTQFYYDLAKSHGLYMTCGSDFHGKTKPVVHIGMCSMEEEENTRLVRKLETLRI >gi|312957890|gb|AENW01000002.1| GENE 35 41059 - 42075 746 338 aa, chain - ## HITS:1 COG:lin0520 KEGG:ns NR:ns ## COG: lin0520 COG1940 # Protein_GI_number: 16799595 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Listeria innocua # 5 317 4 317 334 166 29.0 4e-41 MAWNPIQMKQENLSVLRNVFLKQHSATKPQLAKLSGLSVVTVNSLIHELLETGEVIQKQM LPSGGGRPALQYQYNGRYKMALTAYMYVQEGRERLFLEVQDLFQNMVASDAYEIADMDID MLEHAISRWMKQYPTISVMVFGIPGTEHQGKLKVMDYAIFQSQELFARLRSTYQMPVLIE NDINAALFGYCQRQTIRQECTAGLYFPKKYPPGSALYIRGDIYRGANHMVGELDQLPLGV DWREQNISDEQQLRNMDLLIQSIACMYDPHALLIYCDTMDEALLKKLITIMKTEWKVLTP PTMILRSSIHEDFSLGVREIAARELFDQIIRKERGTSL >gi|312957890|gb|AENW01000002.1| GENE 36 42478 - 43458 767 326 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 1 324 215 543 545 209 36.0 1e-52 MITGIQRVAKENVFSDLNNIFVCTVKDADYASYFGFTENEVKKMLVDNGMEYTADVKEMY DGYNIGGIDIYNPWSIVNYVCKKVLAPYWINTSSNTMIKEAMQSCEQDFKDDYEKLIKTG TVETLVNFETSFYELKNTSSLWGLFVNAGYLTVHKTLDVLEDMYSLRIPNNEVARGFQSL TVFFLNVDETTVAKMFQALKTQNWDEFLKNYQKMLLESVSYYDLRNENSYHSLLLGMCMW LRNDYEIVSNRESGEGRFDILLNSKNNALPSMLFELKYTKDENVNLEALAAAGMEQMKKK KYGIGLENCVYIALAHCGKRVSMSRE >gi|312957890|gb|AENW01000002.1| GENE 37 43590 - 43874 143 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224543614|ref|ZP_03684153.1| ## NR: gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 [Catenibacterium mitsuokai DSM 15897] # 1 94 85 179 543 90 47.0 4e-17 MNSYPTIFLSFADAKDSKNRIVACVKEQLLKVYDQYSFTLENLSIFEKPQFDSILKGLSN LDDGNLETVDRAISFLMTRCHQYYGKRVMLFIDE >gi|312957890|gb|AENW01000002.1| GENE 38 43919 - 44146 205 75 aa, chain - ## HITS:1 COG:no KEGG:CLH_3192 NR:ns ## KEGG: CLH_3192 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 55 1 55 563 76 67.0 3e-13 MKKGIPLGIMNYRELKEKNYYVVDKSLLIQEFLERMAKATLVTRPRRFGKTLNMSRRCPP MACLQNSSISQRIQK >gi|312957890|gb|AENW01000002.1| GENE 39 44546 - 45190 461 214 aa, chain - ## HITS:1 COG:CAC2606 KEGG:ns NR:ns ## COG: CAC2606 COG0698 # Protein_GI_number: 15895864 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Clostridium acetobutylicum # 1 212 1 211 213 221 49.0 7e-58 MKIGLINEDSQADKNAMIFDILKQEAEKKGHTVFNYGMYTEQDSHQINFTQIGILAAVLL HSHAVDFVVTGCGTGQGAMISCNAFADVVCGYVNTPLDAYLFTQVNAGNAVSLPFSQYFG WGAEINLKYVFEKLFAQEFGGGYPQCYAEGEKRSRARMMNETKLPAQYALLEALQRTDQE LLKQLLDYPQFQEQFFRNAEDTPVTRFIKNLLHP >gi|312957890|gb|AENW01000002.1| GENE 40 45199 - 46008 819 269 aa, chain - ## HITS:1 COG:lin2108 KEGG:ns NR:ns ## COG: lin2108 COG3716 # Protein_GI_number: 16801174 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 10 264 9 267 273 257 51.0 2e-68 MNSNSVEKKLTKKDLKQVFVRSIAYNSSFNYERQLNLGWAFSLMPVLRKLYKDDEEQMKA ALARHLEFNNITPFICTVLFGITAAMEEQNANDRDFDTESINAVKVGLMGPLSAIGDSIF LGTLRVIAASLGCSLALKGNILGPIIYLLIFNIPNFASRYFLMYKGYELGTSFLNKVEES GIMDKIFKGAGILGLMVIGGMVATNVSVPLTVAYDDVKILDTINGVMPNLLPLCFTGLIF YFLKKDIKVTYILAGIILFGILGAAISMF >gi|312957890|gb|AENW01000002.1| GENE 41 45998 - 46762 890 254 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 235 1 235 259 189 43.0 4e-48 MIQAALIALIAFLAYMGDALGYSQYDRPLCTGVLVGIALNDVQQGLMVGASLELVYMGTL TIGGAFPPDIYTGGILGTAFAITTGSGIEGAVALSLPIATFALLIKQVIYTFVRGFFVHR ADSYALQGNDSKVAAMHVWSTLAYCVPMAIVVGICFYVGGPAVQAVLDQIPAFIMKGLSA ASGMLPALGFAMLVKMIISKELAPYFFIGFLIASYLQIPVLGIACIAILIALLVIMNDRK KNNVEMGGMDDNEF >gi|312957890|gb|AENW01000002.1| GENE 42 46783 - 47247 611 154 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 149 1 147 153 157 53.0 1e-38 MIKMLRVDHRLLHGQVAFSWTGYLGVNCILIANDDCVTNDLRRTTLRLAKPSSCKLIVKG IEESIAALNSGKADKYNLFIVVDNVTDAYRLASEVDRIHIVNIGGLKAGEHTHPHPSNHN INFTDEEEMMLRELVDKNIDVELRMVPSDPVKRL >gi|312957890|gb|AENW01000002.1| GENE 43 47260 - 47679 410 139 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 139 1 140 140 87 35.0 5e-18 MKTKIIIASHGRFAEGIMDSLKMIAGEQDHVEPLCAYIDRSVDYSARIRQLVADHDYEKQ ALLVITDLLGGSVNNEFMRFTEDYPFYLVSGLNLSLLLELALYPDELKSDTIQKIVEHNS DYIVFCSGDTLHLQEENDF >gi|312957890|gb|AENW01000002.1| GENE 44 47680 - 50397 1878 905 aa, chain - ## HITS:1 COG:STM4534_2 KEGG:ns NR:ns ## COG: STM4534_2 COG3933 # Protein_GI_number: 16767778 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 484 892 43 448 461 184 30.0 5e-46 MTISTKNEILDHLLSKKVEPDLRNIEEFSAHILSSELHISRSLASQYLNGFVKEGLLIKI ATRPVYFLSRKNIEEQFQVQFKESMFYSVEDFLDTLSKKTCIKRNFMKMIGYDTSLHTVI DQLKSALKYPPNGLPVILYGEKGSGKSLMCQKMFEYGQDAGIIPEQALLQKYKVLEQDMQ LAEQLLGTEVKKGLLEQCEGGILYLTQAQNLSKHDQQLLMRILEDGGFIRGGIRITLRTR IILSLDEDYQKYLDYDLIQCFPIICRMPNLDERYQDDKEELIIHFFKQQSWKLGRYLLVS KNLIHILLTRTYKRNIDELKRTVEDVCARANSEEETTDQLYIRMYQLPDSILMDLGEQDY MEEQVEYVDISSFKRNEESRKLLELFETILNRVPKDESTSMISYVKELNGVLTQYCSAIA YNEKYTNQQILALEHTIRNILNRVLTTYNVSIPYHCSPLFAACIYGRQSHNRILEEWKQE HAYEISKCLSLLEKQYPQGYLICEKLSYALLANLELGFDDMEKVILMIHLGFYHEHAHQN KYLSIIIAHGYSTASSMAEAINSLLGSYLFEAFDMPLDTSMPDIADRLKRYIDRYTIKND ILLLVDMGSLEHIDEQLTMIDNKNIGIINNVSTRLALDIGESILQGADMESLLRKAAEHS TSTYTLVENKQKKDLIIFISDNGIKMANRMRELFADSLPKAIDIEMLSIDLLDFRNEDYM NEIAKEYNILFVSGICSSIDCPKQFISLEDLITSNQLDYLRTLLNKYLTIEDIDTFTRNL IHNFSLGNALDTLSILDAKKLLEFVEGAVNQMQLQLDRRFYGNTLAGLYIHLCCMIERLV TKEPITNHEGLQQFEKENRKFIEIVRRSFTKVCSHYGVELSMSEISYLYDYIKEDKLHGT QEGDF >gi|312957890|gb|AENW01000002.1| GENE 45 50529 - 51497 681 322 aa, chain - ## HITS:1 COG:STM2340 KEGG:ns NR:ns ## COG: STM2340 COG3958 # Protein_GI_number: 16765667 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Salmonella typhimurium LT2 # 13 313 14 313 317 227 36.0 2e-59 MSWKLAQNNEISEVRKAYGQTLEKMILEGRPVMVCDADLAGSSGAGYLYDKYPEHTVNFG ICEANMVAAAAAMSRIGIRPYVHSFAPFVSRRVADQVCISAAFAKQDLHIYASDPGYWSL YNGATHTTFEDIAIMRAIPSVHVVAPADSVAFSWVLKWYEQHGGIIYNRCTRKPVPSIYT KDSAFTFGKANILKTGTDVALIAIGAGVYDALESAKQLEEQGISTSVIDLFFIKPVDETV LQNVIQTHKVIVTIENHSRYGGIGELLADIMAQQKTSALLRHISVDDQFGEVGTKEYLKE KFHLTSADIVNKALDGLEKYGS >gi|312957890|gb|AENW01000002.1| GENE 46 51494 - 52243 707 249 aa, chain - ## HITS:1 COG:STM2341 KEGG:ns NR:ns ## COG: STM2341 COG3959 # Protein_GI_number: 16765668 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Salmonella typhimurium LT2 # 6 241 25 269 276 224 45.0 2e-58 MVLYRGDGHIGGALSMSDALAVLFGNYMKEEDWFVLSKGHAGPAYYAVLMLTGRLDQKHI HTLNENGTLLPSHPDRMKTPGVQVTTGSLGQGISQAAGIAYALKTMKREGNVFCMVGDGE CNEGEVFEALQFIANKRLNNCIVMVDCNKKQVDGLLRKVSCDFDFPALLQSIGFHVCEVD GNAVEAVNGKLSECIKRKEQASALLLNTVKGAGIPYFEQQENPHHVTFNEADKQALQDYI NLTGKELNT >gi|312957890|gb|AENW01000002.1| GENE 47 52297 - 53478 529 393 aa, chain - ## HITS:1 COG:TM0820 KEGG:ns NR:ns ## COG: TM0820 COG1979 # Protein_GI_number: 15643583 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Thermotoga maritima # 1 391 1 395 395 251 35.0 2e-66 MENFIYKNPTEIIFGRNRLHALKDQLLKRGYRSALVLYGGSHWKENGTLEQITTQLESCS ISYFVQGGIRPNPKLSEVEQIVRNVKGDIVDVILALGGGSVIDTAKAVAVCLAVPSVRLQ DILLEDQKIKQALDVGVISTIAGSGSESSCSMVITIDEGNLKRACDDEQLYPVFAILDPI LTFTLPYYQMVSGACDILMHAMERYFSPTDNTELIDSMCEGLMRVVISSIEKSIKNPQDY EARANLMWAGSLCHNGLLGTGRKEDWACHRMEHELSGLFNVVHGAGLCALWGSWAAYVRP YHPKRFASFARQVMGIEEVNDDRCGTLGIQALVSFFKRVGMPVCITDLNVCIDEAIIQTM AQNCLLRSDSIGQLKRLSLQDIKAIYRKAGKVE >gi|312957890|gb|AENW01000002.1| GENE 48 53488 - 54351 617 287 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 287 1 287 299 311 52.0 9e-85 MLMNMESLLQTARKHHFAVGAFNVCDSLLFSTVMECAEEQHAPVIVELAPPEFSYVGSDF FAYAVKRMQNSSVPCVLHLDHGKTIQDCIRAIRCGFTSVMIDGSLLAYEDNVKLTKTVVE LAHGVDVSVEGEIGTIGALSDSVEGGVEQVTYTKPEEVTDFLTRTNADTLAVAIGTAHGI YPKGFVPRLRLDILKAIEKVNTCPLVLHGGSANRDEEIAEACRHGICKVNIASDVRKAFF QGTKEMLIETDAFWTPDVFVSGKREAKRVITHKMQLFGCIGQADKYR >gi|312957890|gb|AENW01000002.1| GENE 49 54795 - 54944 113 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDIKFIILVVTKEKTEIQGRPIQMSGSMYEKLAWICCDAMVVMMMQES >gi|312957890|gb|AENW01000002.1| GENE 50 55249 - 55887 826 212 aa, chain - ## HITS:1 COG:STM2755 KEGG:ns NR:ns ## COG: STM2755 COG0269 # Protein_GI_number: 16766067 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 207 1 207 211 219 55.0 2e-57 MKLQLALDDITLEDALSLVRTVRDYIDIIEIGTPFVIEYGMEAVRVMKKEFPEKEILADL KIMDAGDYEAEEALKAGADYVTVLGVTDILTVKGCIDAANRYGKQVVVDMICVEDMPKKI AQMEEIQAHIIAVHVGADQQAAGREPLEDLKLMKECVKAAGVSVAGGINGKTISDYTALR PDIVIVGSGITHALDPVAEARKIYEAVHGGEQ >gi|312957890|gb|AENW01000002.1| GENE 51 55891 - 56838 1042 315 aa, chain - ## HITS:1 COG:BS_ydhS KEGG:ns NR:ns ## COG: BS_ydhS COG1482 # Protein_GI_number: 16077654 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Bacillus subtilis # 9 308 9 313 315 154 31.0 2e-37 MKKIVKILPFYEPRMWGGGERLKNEFNYHTDVKPLGEVYNVVALQGHADCEVSGMDMTLS ALYKQYPEWFNCDTEELPVRVNILDPMADLSVQLHPDDAFARAYNGGRGKPEAWVILDTT EEGRIQFGHKAKTIAEFKEKTEQQDWEGLLKYLKAVKDAFIDIPAGTLHAIGTGVLTYNI SRNADCTLRLYDYDRIDPSTGKKRDIQPEQVYENVNMPDTSTEFVMYPSSLERGIHVTRY WDEPGLYTLMRLQVEKMGTFSHPRFAFYTCVDGEGTIQDVPIKKGETLLVPEGMGMLKFE GIMDVFLASYRNEED >gi|312957890|gb|AENW01000002.1| GENE 52 56822 - 57604 771 260 aa, chain - ## HITS:1 COG:ECs4009 KEGG:ns NR:ns ## COG: ECs4009 COG1349 # Protein_GI_number: 15833263 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 5 244 15 259 269 133 34.0 4e-31 MKIPTFERRNEIIRMLQEHGYVKAQMLAKQYQVSMETIRKDLTFLEAAGIAHREYGGASL SRQDIEQALPVRMGHGSRKKEIARCALGFLEDAKVVFLDAGTTVHELAKLLNDYRPLDIV TNSLLAWECLDAERHNVFLTGGKKREKNRSLTGSWCVQAIESVHADICFLGTSGILDRKG PTTHSYQELEAKKAMVRQSERIYVLADSDKFRESGFHTMCLWEEIDGIITDGSLSAKAYE HYEKNVPIWMAQEDEYEENR >gi|312957890|gb|AENW01000002.1| GENE 53 57810 - 58784 1171 324 aa, chain - ## HITS:1 COG:SPy0441 KEGG:ns NR:ns ## COG: SPy0441 COG0673 # Protein_GI_number: 15674565 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 316 319 303 47.0 2e-82 MKLGIAGAGMIVVQGLLEFVHDIEGIELLGICATKRSEEKLKKLSEEHGIAHTYTDYEEM LKLDEIDTVYVAINNHLHYEFSKKAILAGKHVICEKPFTVHVDELKELIALAKQHNVMLL EAITNQYYPNYLELKKQLSRVGSIHVVSCNYSQYSSRYDAFKRGEVLPAFNADMAGGALM DLNVYNVHFNAGLFGMPKDVQYFANIEKRVDTSGILILDYGSFKSVCIAAKDCAGPSQAV IEGENGYLEVEGSASVCSAVAYTYRDTKEEGRFNSHPDVHRMKFEFIEFERIVREKDWKR VEEGQQESLIVMEIITRAREKAGL >gi|312957890|gb|AENW01000002.1| GENE 54 59118 - 59807 611 229 aa, chain - ## HITS:1 COG:no KEGG:CD3331 NR:ns ## KEGG: CD3331 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 223 1 226 231 113 32.0 4e-24 MCTSIISNGNKTIIGFNLDILNMEYRVRAEEDKVYIAIQDDQEGWLPLFGANSRGDFVAM PTCWPFDERSNPANADSLNIINLDIDLLLRKKTLDEIKAIAEHEAVSSVPGVTFQSQLSD RSGNVLQIIPGQGIRYASKPKYSVLTNFSPFKGSTERHPWMGLDRYHKAVELLENRSEDF DVSDCFEVLKQTAQTICPTVVSMVFDPAANTVYWCENREWDKIEKKKIA >gi|312957890|gb|AENW01000002.1| GENE 55 60111 - 60770 837 219 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 29 219 36 225 229 74 23.0 1e-13 MRKEPYGLMPIFAHRCMHHEIYGKRLQYETYKSSQILHSINDTIDHFGMVVEGVLKAEQY TSQGSVLCSAYFEDNDVFPELLYFTGKRQYTYTLVAVRRTTVAWMHVSDLEEMLKEDTEM MTAFMLYLSKRGLRNQMLLSCLMYQTIQQRVAYWLLSMNHLSEHERIPLPRSQTIWANTL HVSRSSLNQELKRMEKEGIFRIEGHALILLDQKKLEDIL >gi|312957890|gb|AENW01000002.1| GENE 56 60799 - 62610 1917 603 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0484 NR:ns ## KEGG: Sterm_0484 # Name: not_defined # Def: thioredoxin domain protein # Organism: S.termitidis # Pathway: not_defined # 1 601 1 595 600 691 54.0 0 MGQPYVFPHGVSVYDPQKCWNGYTIVPLINDGVLLFDMNGNEVRRWNMHAMPPKLLPGGY VMGLSGYRHPDYGMQDGVNLIEIDYDGNIVWEFDKFEHINDPGRDHRWMARQHHDYQREG NPVGYYVPGMDAKPLEGNTLILVHQTIKNPAISDKKLLDDAMIEVDWEGNILWKWSISDH FDELGFDEAAKNILARDPNMRSSDGGVGDYLHVNCMSYLGPNKWYEHGDMRFKPDNVIFD CREANILAILDKESGKIVWKIGPDFNATPELRKLGWIIGQHHFHMIPKGLPGEGNLMVFD NGGWGGYGVPNPGSRNGSKNALRDYSRVLEFNPITLEVVWKLTPKELAHAIPTDASKFYS PYVSSAQRLPNGNTLVTEGSDGRIIEVTADHEIVWEWISPYYTHNETGPKNNMIYRGYRY PYSYVPQEPTPTEIAIPRIDNTTFRMPNAGALGAKTVIDVEGTLPYYQDVALCVATDDEE DLSQREKVFSVDTAVFEPISGMVEWKDKVVKQQEKPVLVLFGAERCVHCKALHPVLEEAL QEEFANSFLIRYVDVDANKDIVAACHVQGIPVVAVYRNGEEVRRFHGEHDYDDVCDFLDA VFA >gi|312957890|gb|AENW01000002.1| GENE 57 62638 - 63816 1382 392 aa, chain - ## HITS:1 COG:TM0869 KEGG:ns NR:ns ## COG: TM0869 COG0492 # Protein_GI_number: 15643632 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Thermotoga maritima # 1 306 14 315 317 239 41.0 6e-63 MEECYDVIIIGGGPAGLAAAIYAGRAGRKTLMIEKGSFGGRINDTREIRNYPGFISDSGA GLMQKFKAHAQSYATNVFKRTTVTGLETMEDGAFLVHTKRRGDFIGDSVILDTGTKPRVL GIPNEIELAGHGVAYCATCDAEFFRDKEIYVLGAGDQAIEESGYLTHFAKKVTVIVLHEK GHLDCNEMAAAEAYANPKIEFVWNTTLQEILGDEEVRGLILKNVVSGETREVRADGIFFF VGMVPQTAFVQNVVACDAKGYILVNEKKETSVPGIYAVGDCTQTFLRQVVTAAADGAIAA TASERYCRERNQLKSILTPDSGRVAFLFYNPYESSQIEQVTQLEEALQDDYTVIRQDITS QTLLYQLLHMDGTLSSAMFEHGKLIKKNGKEA >gi|312957890|gb|AENW01000002.1| GENE 58 63823 - 65280 1471 485 aa, chain - ## HITS:1 COG:YPO0624 KEGG:ns NR:ns ## COG: YPO0624 COG1757 # Protein_GI_number: 16120950 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Yersinia pestis # 7 475 3 472 483 232 29.0 1e-60 MKKNDVNALLKFHMHQEFAVLPIVLYVLLSGIIMICFHYYSMKALILAAVLAILIGFLLC ADKAHYWDAIVHGLAQYGNARLIMIFMVIGIFSKLLAVGQIGSGFVWIGMHLHLSGGSFT VFCFLVSSLISMGAGAPIAALLAVVPIFYPAGVLMGADPAILTGAMLSGIFFGDALSPSS QVIHTTIASQHDPVTNKGADLLRVMKQRLPYLLIAGILSAVLFYALVTSGSVQNPELLAS MCNPKGLWMLLPILLLLIICFRTSDLFVGVTYAIVAGIIVGIATGLFRFSDLISIQYETQ ELHGILFDGLSGVVDIIISTILLYGLIAIAVEGGMMEKCCNYLTSRKALQHVGGAEAMIS LGVGIVNILLAGCVLPSILMFKDIADTIGKKAGISPERRSILLTAMTTNITAIIPINSAF VMGAVTVINQLAANHAYLPVVTPFQIFLSSYYCLLLTLICGIWVVLGAGREGEHKYSMTY HHAKE >gi|312957890|gb|AENW01000002.1| GENE 59 65767 - 66390 558 207 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKIGCCILMLLCCACSAEPDRDVEEFQKDKDTVAQLDTALKKLEAADSFHLKQENEKGQ LVDLSIRKSSSTEDTTAKPNDVYAPYEFSGTYTDEKGASFHIEQTKQSGLMAQVNIADTG LLPQGFNTIRWDKQTFEQTLENAALEDYVRICETDDDQLHTCKVGELTVIFKTDADGYLI YHKSSRDQVMRIYTNIHKEEVHFMNKI >gi|312957890|gb|AENW01000002.1| GENE 60 66701 - 66961 150 86 aa, chain + ## HITS:1 COG:no KEGG:Swol_2034 NR:ns ## KEGG: Swol_2034 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 1 84 1 84 91 66 38.0 2e-10 MESLDNMLNIGKEMKRKLFSIGVRSSEDLIRLGSKEVFSQLKEQYPNVCLVHLYALQGAI DNVDYDKLPDEVKRDLKQFHDRIKDK >gi|312957890|gb|AENW01000002.1| GENE 61 67026 - 67373 292 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296443870|ref|ZP_06885900.1| ## NR: gi|296443870|ref|ZP_06885900.1| hypothetical protein CloleDRAFT_3987 [Clostridium lentocellum DSM 5427] # 1 115 1 115 115 186 83.0 4e-46 MFNEVCIYEAKLTKLDEIEELMREVAEFYLEQDGVIDVHYIKRTHRQKDFNAVKEGELPV RLTRNVGKVTYVLYWVMENEEVHARVGKLGLEKFYKRWNRCLITMPKIILGENIV >gi|312957890|gb|AENW01000002.1| GENE 62 67428 - 68027 602 199 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229547905|ref|ZP_04436630.1| acetyltransferase including N-acetylase of ribosomal protein family protein [Enterococcus faecalis ATCC 29200] # 6 194 21 204 204 236 59 4e-61 MNTPALVTKRLILRRFTEKDMKALFLILKDEEVNKFLPWYPLKNLEETRKFYEERYALKY VQPQAYAYAICLKEDNFPIGYVNVDMEKHHDFGYGLRQEFWHRGIVTEAGKAVIEQVKTD GLPYITATHDKNNPRSGNVMRRVGMTYRYSYEEQWQPKDFPVIFRMYQLNFDGNEDFVYK TYWNMYSNHFIEKLKFDKK >gi|312957890|gb|AENW01000002.1| GENE 63 68739 - 75350 3587 2203 aa, chain - ## HITS:1 COG:no KEGG:lse_0546 NR:ns ## KEGG: lse_0546 # Name: not_defined # Def: cell wall surface anchor (LPXTG motif) family protein # Organism: L.seeligeri # Pathway: not_defined # 531 1143 563 1109 2011 84 22.0 8e-14 MRGLKKIRGRNLVCAILCMGITVTNIAGVLAEEYKEEDSFLSEEKIPESNANKQQAADKL NETSQTEDASTEAPEHKADNVLSEMPKKTLAKENPGMQITTAVIKDDAGTEQSLLEGNGL FTIDYTKSVTLHVKVQSTLNLKNKRVKINVPDGLIVVEYPKPNAMTGLVASVSPENIEEL NSDNTYGSYRPKSGTITYSLRDTAEYSSFNIILAPDTTLWNKKLGSTMKNPLEVSVYSVQ GDEQREYQKVSGKAVITGDKLTSGPVMTSWDSKRIVPAAANTPFKMQQIRFRPDRTRYSM GMFFQKLEVTIALPYNSTKGTYAEYVRTDFDTKEYGDNWMDPVHHKDEQKFQFNEKIDNI NHTVTLIWENMYIPRDDYFTPYFRWKDGEPCDAGDKIEWRNSNIQLIKADGTGTVNRTAV GGTITYADGLYETTANTVNILNNDFNKENLDQFKAGNASDIRMQGASSGAGTSGKSGIVS VYDSAPDMVYFLGQFLVSNQGTMESEPQTVEFIYQDSDELGVIAQRIPATSGNPIEVWYT TNKTSETKYSHALTSSNGFALFTAEMAGLKKDEYFTNIRANVGVYDANYMGYVESRTADP SSACAGTLGKLKKAMEPKNIPSFATMKMYDTQTRDETVLPATFDAKFVSANESNQVSLAL INTIENGKKIPVLDIHSTTAGETVQFNGVIASTAYPYSIHRLVMDTEIYIRLPKSIKIEN LKLTRLEGSTADRVLLGDGTPETGKVKSAPLQEKTDYTILDSECANDYRMYKISFESGKA PVGWFTQNLGQYQIGLSFDMKIDKVADAMALDMRNCVRIKSASLASDNAGGTQSEYIQSD TDDWDGDADTTEKFCTFNKNADDTKLSIVAARLGLSFGFGAKLSEGDSADISDEGYANYE IDKKIEFLKEDTHSIDFRFTAKNETGRPFGEEDAKAFYYYIPVPKKGDNWDTHIQDKPFE FNMKMSGPATMIGSSQSDLQVQYSTTVDSKATIGDPLYYNNKDNYVDADKISDWSTVKML RISAKDTVTEIPNNAEIKIYLHYEAEKATSALVGSVVNFGPCGYTPYTVGNEENGGHMPL PHIQAEFQTGIIEGKIFVDRNFNGVYDEDTDELYKGDVKIEAPHQNAVGSDDTESHETTA KNGTFKFTGRRADTYHVKITNPGNTDINSAYPLKFSLPEDGIFKEDGNNNSATGTIVVNC DEENLKKNTNLSIGLQAPHTITFKAENATISKASIKVWHKNTVGTIPTVKEADGWRFDGQ WSDADNKVYSTEELKELSIVKDRVFTAQINKLYTVRYDGNGGTGDVPGSSAHIANESVPI AAKPDNLKREGAIFAGWSKEKISSPLSADASQEVINKIIIDDELSMPEKDLTLYAVWAID GNGNGNPDYNDDAVHVRYHDAASDRKDVICPHYHVAGEKVQLSSTAKDIAGKQIEHDELG SAEGTSGSFTFENGNHIFVGWSIKPTLDTIITNSREYETLKDSIQTEVTMLETDAADPDG NTNVYAVWAADSNNNGIADYLEEHQLVYDANVIEGNVENMPTNDNKIYLPGNKASLSETV PSHSEVNGKKVVFLGWTTTQSPHICERNHTPIKTVKKITFGNENVTVYAAWGYDENGNGT ADVLETYSLKYDLNGGNGTTPAEKNGIKHGESIAITDEKGFTRNAREIFVGWSRQPYSAA FTAEQKADIEKILISGNTIVMGTENVTLYAVWAEDRNGNNQADYTETLSQLLYSENALND GIVQNMPKDINKYLPKEKAILSNEKPMHSKVDGKAVVFIGWTTKKNNKIYQWNDCELETI TEILFGKENITVYAAWGFDEDGNGTADALEDWGVISYDLAGGISPDGIEKYDEEVIKIGK THMVKTAPMKDGYKFIGWKYKDKVYQPGDSIEVKAQTASMKLIAEWKGGNLTISKLVDGT KGDTKKDFHFRVYLQDTKINGLFGDISFKSGVSDEFTLKHGERKSAINLPLGTAYEVVEV ESNQDGYITTSKGAKGKITTNASTVEFLNTKNSTPTEPEVKTGSLMISNTVAGNEEEQKK DFTFTVTLSDKRITGVYGDMRFKQGVANIVLKHEESIAAKGLPSGIRYTVEDTDNNKAYK VEKSGETGIIKEGEIAFAKFLYYRKDSVDIDEGVKDNVTSPSWYNEKENELESSVNVNTP GTKEVPETGDKSNRSLWVLLLVASGIVISILTASKIRKGTHCK >gi|312957890|gb|AENW01000002.1| GENE 64 75606 - 76046 344 146 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHKNLKLTSFTALGEDVIQVENELREYAKNGIQLSIQGMVIDAAVLSSFYEYIIDLNRK KMKESQHRGIQKALQRKLEGKGNYGRPSIDLPNDFEVQIRKRLVDREALSEYQKELNIKR STFYRHANLIKHAILMEEAEQNIQKK >gi|312957890|gb|AENW01000002.1| GENE 65 76144 - 76788 321 214 aa, chain - ## HITS:1 COG:slr2100 KEGG:ns NR:ns ## COG: slr2100 COG3437 # Protein_GI_number: 16330586 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and an HD-GYP domain # Organism: Synechocystis # 2 196 163 359 368 153 41.0 3e-37 MISILSHIVEFRNGESGSHIRHVHTITRLLLETLVHQSTPYMLTDTDIDIISTASALHDI GKIAIPDAILNKPEQLTAEEFRVMKTHTEIGAEMLMELPAEQRESELVKVAIEICRWHHE RYDGSGYPDGLKGEEIPIAAQVVALADVYDALTSERCYKKAYSHTKALHMIVNGECGVFN PTLIQGLIDISNTLASNLTYNQPDSYNVQGAVKI >gi|312957890|gb|AENW01000002.1| GENE 66 76940 - 77239 66 99 aa, chain - ## HITS:1 COG:alr1121_4 KEGG:ns NR:ns ## COG: alr1121_4 COG0784 # Protein_GI_number: 17228616 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Nostoc sp. PCC 7120 # 6 76 269 339 389 57 41.0 6e-09 MHVNKQKILIADDSEINRALLIEILENQYDIVEAENGVEAIALLSRYKTEFSLLLLDIMM PKMDGFEVLAFIKKKKLECQPCGYYDLCGQFSCEYKTGI >gi|312957890|gb|AENW01000002.1| GENE 67 78060 - 78905 324 281 aa, chain + ## HITS:1 COG:no KEGG:Elen_3094 NR:ns ## KEGG: Elen_3094 # Name: not_defined # Def: regulatory protein GntR HTH # Organism: E.lenta # Pathway: not_defined # 37 256 246 466 486 75 23.0 3e-12 MYTQLTHLLHKFVYAVQETLQHLADTLETYPLQSPAAFSWRPTRGKDYFYTRIVSDLNRK IGRGDYPRGTFLPSEKQLAAIYNVSVSTIRKALTELSQRGFVRTINGKGTMIINPDDTRV RQMLPNPGRTEEALRYLHALQLLALIIHPATVNAAAKFKKRELKSLEEKLYLPDSICIID IFEAILYHTDAQPLKSILEEAFRLTEWGHYIAYYDHKKQVLQTVNKGLRLAVHELHTGDY IEFANRIADSYYHIFQHARDIMTNKYGFSSAASIQLPEKYY >gi|312957890|gb|AENW01000002.1| GENE 68 79083 - 79865 989 260 aa, chain - ## HITS:1 COG:VCA0606 KEGG:ns NR:ns ## COG: VCA0606 COG0637 # Protein_GI_number: 15601364 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 3 260 6 264 271 181 34.0 2e-45 MKIEGIIFDWAGTTVDYGCFAPVQAFAEVFHAFGMEVTMEETRKPMGMLKRDHIKTMLEM PRIKRLWKSAHGRAVTEADIDAMHDTFTEKLMSILDQFADPKPYVVETIARLRAMGLAIG STTGYTDQMMAVVTRVAKEKGYAPDFWISPNSVDNYGRPYPYMIFENLKQLHIRDVHAAV KVGDTISDIKEGVAAGVISVGILEGSSLMGLMQTEYEALSTQEKEALCARLRKEYIQAGA DYVVQDIRELPALIQELNDK >gi|312957890|gb|AENW01000002.1| GENE 69 79867 - 80961 1373 364 aa, chain - ## HITS:1 COG:STM0431 KEGG:ns NR:ns ## COG: STM0431 COG0075 # Protein_GI_number: 16763811 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Salmonella typhimurium LT2 # 2 359 4 363 367 362 49.0 1e-100 MKTYKLLTPGPLTTTDSVKQEMLFDHCTWDEDYKQITQRIRRELLQLAHVDETAYTTVLM QGSGTFGVESVISSVIPDDGCLLLLSNGAYGERIAAMCRYHHISCVHIAQDYDKIPDRMK AEEALKQHPEITHIAMIHSETTTGILNDIQSIGELAKTYHKVFIVDAMSSFAGVDIPMHD WHIDFLVSSANKCIQGVPGFSFIIARRELLIASRGCARSLSLDLYDQWAGMEKDGKWRYT SPTHVVLAFAKAMEELQKEGGIPARSKRYAHNRDVLIEEFGKLGFLPYVEKAVQGPIITT FLYPDTDFDFAQMYRFIKERGYAIYPGKLTDKDTFRIGTIGEIYEEDILRLAQIMKEYME SRGN >gi|312957890|gb|AENW01000002.1| GENE 70 80975 - 83581 2892 868 aa, chain - ## HITS:1 COG:SMb21542 KEGG:ns NR:ns ## COG: SMb21542 COG1178 # Protein_GI_number: 16264731 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 40 535 161 658 680 217 27.0 8e-56 MHKKQLELKGIYVVLAALFLVFLFMPVAMLLYKSFESGTSLTLQHYRDLIFSGKFVNAFG NSFTVSGISALVTTLLAFLMAYTINYTNVSQRLKKGIRSIATLPMLLPTITYGFAIIYTF GKQGLLSKLLHVQLFDIYGFNGLLIGYVIYTLPIAFLLVNNTMKFIDKKFIIVSKIMGDS GGKRFWMTALSPMIPTLAAAFLQAFFLSFTDFGIPAAVGGEFAVVATTLYNEMLGSIPNF SNGAVVAMMMLLPSIISIVLLNYLERYNVRYNKISRIELPENKGRDLWCGLGSGLILCSI LLVFTVIILLPFVKEWPYDISFSLQHFTDTLASANLLSVYRNSLIVSLGTAACGTMVAYG SALVTTRSTLPVLCRKSTDAISSIANTIPGMVIGIAFLFAFSGTPLQSTFWIIILCNMIH FFSTPYVMAKNTLGKLNTSYETTAMLMGDSWFKTIRRVVVPNSKSTILEMFSYYFINSMV TISALIFIVGAKTAVLTTKIKELQHFAKFDQIFVLSLLILLTNLLVKGIILFVTQKKDEK KAKGVRVKKYALGILAGGVVLFTFVFGQGKEPVVIYSNADEEALVAIQHALDENGFQDQY VLQSFGTSELGGKIMAEGKNLEADIITMSSYYIDSAQQKNDMFDKLTFPTPTLKTYSDYD TPLTALEGAMIVNTSVLKEKQLPVPSSLKELANPKYKGLISIPDIKASSTGWLLVQALLD TYGEEDGKEILTAILDNVGPHLESSGSGPLKKVRSGEVGIAFGLRHQALADKEKGLPIDC IDPIEGNYSLTESIAVVKKENVNKTAMAMARCIMENGRRDILYTYPTALYEGEQVEKKYA SKYPRVFKRALSVELLEEHQAFFEGCRK >gi|312957890|gb|AENW01000002.1| GENE 71 83574 - 84326 382 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 237 1 245 245 151 36 1e-35 MLTLNNLKKSYDQTSILNGISLSIETGEIVSILGPSGSGKTTLLNCILGITEIDSGSVVF NGQDVTGVSMEERGFNIVFQDYALFPNLNAYENITYGLKNKPGISTQQEVNELIELLGLS QHLDKHIDQLSGGQKQRVALARTMVMKPKILLLDEPLSALDGVIKESIKEKIKTIAKEFH LTTIIVTHDPEEALTLSDRVLIMKDGSISQYAKPKDIIEHPQNSFVKEFILNQLEIKRNN IFTLFGETYA >gi|312957890|gb|AENW01000002.1| GENE 72 85145 - 85855 379 236 aa, chain - ## HITS:1 COG:STM3015 KEGG:ns NR:ns ## COG: STM3015 COG1794 # Protein_GI_number: 16766317 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Salmonella typhimurium LT2 # 1 228 1 229 235 275 57.0 4e-74 MKTIGLIGGMSWESTIPYYQIINEGVKAQLGGLHSAKIILHSVEFDEIEKCQSRGDWKKS GEILGKAAQGLEAAGADFILICTNTMHKVAPQIASMIHIPIIHIADATAEELLNHNIHKV GLLGTKYTMTQDFYKQKLVERGIEVIVPEATEIEVINHIIFHELCVGQIKEDSRKKFQSI IERMKSRGAEGVILGCTEIGLLIHQSDSSIPVFDTTCIHAKRAVEIALGDGRMGNC >gi|312957890|gb|AENW01000002.1| GENE 73 86031 - 86669 503 212 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 96 1 98 107 71 37.0 1e-12 MKLAERIQYLRKMKGISQEELAEKAGVSRQAVSKWESDQSTPDVEKIIIMSDYFGVTTDY ILKGIQTVESKEQKSRELASKVLYISSAAFVVIGLFCAFGGWYAQQTMEAVWGAMIVQVV GVAGFFIASILSREKAPIYIAWILINGIVFMPVSIMTGYIADLVFRQGWISPYPIGIVHT LAFAVVYLSVLIMSYFILKKRQENAVDIQKFY >gi|312957890|gb|AENW01000002.1| GENE 74 86809 - 87261 376 150 aa, chain - ## HITS:1 COG:FN1295 KEGG:ns NR:ns ## COG: FN1295 COG0454 # Protein_GI_number: 19704630 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Fusobacterium nucleatum # 20 141 6 126 135 91 37.0 7e-19 MNIQRIANRHLEDVTKLVTKVFMEFEAPDYTDEGIKTFFDTALHNQEFMDQLDIWGAYIN KKLTGIIATRNNGSHIALFFVDGEYHRQGIGRRLFEAALKNSSSNELTVNASPYAMEIYH HLGFKDTKTEQTVMGIRFIPMIYRGKTRDC >gi|312957890|gb|AENW01000002.1| GENE 75 87596 - 88375 486 259 aa, chain - ## HITS:1 COG:no KEGG:FMG_0111 NR:ns ## KEGG: FMG_0111 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 6 252 22 250 258 89 31.0 1e-16 MKKIILNQASLKLIAMGLMLLDHIYKIFCFDVRDFLLVHTTLTQEAIQWGIQLIGMLGAA SFWIFAFFIAEGCHRTHNRSAYLIRLLIMGLISEIPFQYMICILLDAPLTLHFALTNIFF TLFLGAAAIMAYDAFRSRQTLQKLSLLPLPLCMLIAYVLQTDYGALGVLAIFVCYCGSDE YRLYRLGGVILLEASTLLIQGQSLQADDLLYAFLYILYASLSLPLLSCYNGKKGALPKWL FYTFYPLHITILVVLYITA >gi|312957890|gb|AENW01000002.1| GENE 76 88693 - 90096 1738 467 aa, chain - ## HITS:1 COG:Cj0025c KEGG:ns NR:ns ## COG: Cj0025c COG1823 # Protein_GI_number: 15791424 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Campylobacter jejuni # 1 456 1 459 461 286 39.0 6e-77 MKNVFLSQFLMISEWKTIVFLIAYLLLAFAVYKLPKKKFSFSSKVLIATVLGLALGLAMQ AVSGFAADPMKIPFVNETTLWYSLIGNGFIDFIRMLVIPLVMVSIIHVILHMDERENVRK LVKRSILTTMGMVAVAAVVGLTLGIVFQLGGSGSAASITNGEMKEVVPVVTTLRNLIPAN PVEAMVNSNVVGLVIFSAFFGLAARRMQKKYPDTIQVFYELIDALHKIIISIAMTIIKGM PYAVLALLANTIAQRGLNSILEVGKFIVILYIACIIQLMIQLLAISFFKVNPITYLKKSY SLLLLAFTSRSSLGVLPATIDTLTQKLGVSQGTASFVSSFGTTAGMQGCAGVFPALLIVY VANTSGTPIDISLIIMSIIVITIGSIGIAGIPGTSTMAASVGLSGVGLGASFAFITPILA IDPIIDMMRTMLNVSGSLTNAIMVDRQLELMDMELYQDMTRKEAEKV >gi|312957890|gb|AENW01000002.1| GENE 77 90363 - 91121 758 252 aa, chain - ## HITS:1 COG:lin2747 KEGG:ns NR:ns ## COG: lin2747 COG0101 # Protein_GI_number: 16801808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Listeria innocua # 1 244 1 247 248 183 42.0 3e-46 MPRYKVTLSYDGTAYGGWQRQTNTHSIQQEIEAAMEKIEGNFIRITASGRTDAHVHALGQ VFHFDSAKDLAPENWRRALNSLLPHDIRIQDVCLVEDDFHARFHAVSKRYDYLITTDVNN PFYYHYMGKDRKVLDVKRMSECARVFLGTHDFTSFTSSKLDPRKSKVKTITRLDIVQEEH AVRLVFEGNGFLRYMVRMIAQTLIEAGKHRLDVADVKQMLYGQDKHLCRYKAQAEGLYLV HVTYADTKKTKE >gi|312957890|gb|AENW01000002.1| GENE 78 91114 - 91914 1184 266 aa, chain - ## HITS:1 COG:BH0166 KEGG:ns NR:ns ## COG: BH0166 COG0619 # Protein_GI_number: 15612729 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Bacillus halodurans # 3 250 4 251 265 190 45.0 3e-48 MNNIALGKYLPLDSIIHHMDPRAKIGAMLIMMIAIFIPAGYAGYGVIAAAVIGTALLARL KLSFLWRAMKPMLFMLTFLLIINLLVIRDGDVLFTIFGFSVYTGAIAQTLYIVIRLALMI MITTILTATTKPLELTLGIEDLLKPFQVIHVPAHEIAMMISIALRFIPTLIEETQRIMKA QASRGVDMEEGSLMEKVKAILSLIVPLFVSAFQRAEDLAYAMEARGYIPNRMRTRYKQLK MEGRDYVLLIASVLVFTAMVAMMLYA >gi|312957890|gb|AENW01000002.1| GENE 79 91907 - 92767 416 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 4 261 131 379 398 164 37 2e-39 MPITFQKVAHTYNADSPFSYAALKGIDLEIPEGKVTAIIGETGSGKSTLVQHLNALLLPS EGEVQILDKTITAGSKPKNLKELRRLVGLVFQFPEYQLFEETIEKDISFGPKNFGVSAEE AAQRAKEVLKVVGLDESYLQRSPFDLSGGQKRRIAIAGILAMNPDVLVLDEPTAGLDPQG ASDMMRLFVDMNKKYGKTVLIVTHDMEHVLQYCEEVVVVQDGSIKKHCDVQSFFETVELL QELNINPPAVIRLREELIRRGFSIDRTLLDMDKLAAAVACEVKKHE >gi|312957890|gb|AENW01000002.1| GENE 80 92743 - 93570 1069 275 aa, chain - ## HITS:1 COG:UU539 KEGG:ns NR:ns ## COG: UU539 COG1122 # Protein_GI_number: 13358103 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Ureaplasma urealyticum # 4 270 27 293 294 241 48.0 1e-63 MEKIRVEDLTFSYDKETNAVEHVSFSIEEGSYTTIIGHNGSGKSTIAKLLIGLLDKDQGH IYVDQDELSIDTLYDIRDKVGIVFQNPDNQFIGATVADDIAFGLENHQVETEKMQPIIER FAQKVKMTEYMQSEPTKLSGGQKQRVAIAGVLAMSPQILIFDESTSMLDPQGKAEINELI QEIHKESNITIISITHDIEEVSKSDYVIVMDGGHVVMKGLPDDILRKEKELIALQLDIPF ALKFTKAMRAHGVDMKDCTTMEKVVDEVCRLHFKK >gi|312957890|gb|AENW01000002.1| GENE 81 94355 - 95674 425 439 aa, chain - ## HITS:1 COG:CAC2485 KEGG:ns NR:ns ## COG: CAC2485 COG0534 # Protein_GI_number: 15895750 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 6 432 9 435 442 211 32.0 2e-54 MNIDKLEENSVWKIILALALPTMIGQLGTILYNMADTYFIGQVNDVNQVAAISVTMPVFL VLISLGALFGIGSASYISRMMGSKNEHEMKKASAYTFYILLACGFVFTVLGIVFINPILS IIGCDTNSWSYSHDYLFIIILGTLAIMISNAFAFTLRSVGETKKAMYGLVIGSLLNIALD PIFILYFHMGVKGAAIATVFSNVVTSLLYIYYVQRNVYLSLHFNDVSFAMSLQKEIISIG IPGSLVTILLSFSNIILNNYCVLYGNVAVAAMGIVSKINLFPIQLTVGLGQGIQPLIGYC VGAKKKDKLKETMKAANIISLCLGMFFVLIFILMKAVLMQMFIDNEEVIHSGELFLMIIT ISTPILGGIFIFSTFFQSSGLVKPSLFVSVARQGLFYIPIIMLGNYFFGIKGVIIAQPIS DILCFIVCIRWYRKIMHEA >gi|312957890|gb|AENW01000002.1| GENE 82 95826 - 96101 176 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYIVLVKNKVNQSKKTEYMRDSQLFAEEMKEVAGCKDTYVLTSADYEDVIVNVEVWESKY VYEQYDGHVFLKYKEKLKSNFISNTIETYTL >gi|312957890|gb|AENW01000002.1| GENE 83 96083 - 97522 793 479 aa, chain - ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 3 470 6 474 474 370 43.0 1e-102 MNEEFLWGGSTSSFQFEGGAFEDGKGKSIYDVITENSKHNVDQSFEAWMGANKVRDYSIT SDFYHHYEEDIKLLAEMGFRAFRMSIAWTRLYPDGDGSLNQKGVDFYKRVFKLLKKSGIE PVVTLYHWDMPQSLVDRYNGWYGIETVHAFKQYVDTCFQEFGCYVSYWLTLNENNMTLKM PTFGIGKKMTPETVGYKEFSYTIYHNTNIAHFYAVKRCHEILPHAKIGCMIASSLAYPLT SDPEDVFLAQQHNQELTYDYLDLLCKGEYTSKNIKQFEKDGWHGYRHEEALFKDEKAKID FISFSYYYSVCVGKESNAINENAETLQMMYQALRNPKLKQSSFGWTIDPLGLRILMNDLY DRYNLPLMIVENGLGVKDDNLTKDKKVHDDYRIAYLKQHIQAIIDAVDKDNVECLGYLPW GCIDLYSASGDRDKRYGFIYVDYEDGLKRYRKDSFYWYQKVIESNGKELEGESACTLFL >gi|312957890|gb|AENW01000002.1| GENE 84 97534 - 99384 838 616 aa, chain - ## HITS:1 COG:BS_bglP_2 KEGG:ns NR:ns ## COG: BS_bglP_2 COG1263 # Protein_GI_number: 16080978 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus subtilis # 92 451 1 355 364 231 36.0 4e-60 MKKDYADLAKKILQYVGGKDNITFVMHCATRLRFTLKDIDKADTKSIKELKGVIDVIIKN GQYQVCIGPDVIDVFHELNQLGTFTKQENDNSKEKKKIVDKFFEVISGIFTPIVPILMAA GMVGAVLTVLNLIGILPDTSPTYYVWNLIKEAGFYFLPIYVAYTASQKLGANPFLSMLLG GILLHPQLNNFEALGLEQLNFFGIAIKNVTYSSTILPIILSVWLLSYVEKFFNKICPQVI RAFSVPMLSTMIVVPIMLIVIGPAGAYLADYLSEFVQYLGDNLGFLAVGIIAALTPIMIA TGTHSFAFPVIVTTLAMNGSEALIVPAMLAENIAMAGAAFAVGMQSKNKDVKAEANAATI SALLGISEPAMYGINLPRKTPFYATIVASGIGGILAGLLGVKYYAIASASLVGLPANIGD GSIMGVVYAGVVIVVSFISAFVLTKVLSKKDETIEPEIKNAIKEDNKKIEIKAPCNGAIV KLTEVDDSTFASEAMGKGIAMLPEEGILYSPVKGIVKTIFPTKHAIGLLSDDGAEIMIHV GIDTVQLEGKYFTTYVKPDQRIKIGDELLEFDIEEIKKLEYDIVTPIIITNSQEYLEVLE CDKDQVKRGETMITLL >gi|312957890|gb|AENW01000002.1| GENE 85 99520 - 100359 452 279 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 276 1 274 277 204 39.0 2e-52 MRIKRILNNNAVVSLDENENEVILLGSGIAFKRKIDDEIPLCSVDKIFSLKKSENKSKFY ELISDIPMEYIKLTEEIILMAEEKLEKKLDESLYLLLTDHIHYAVERSKEGQQIRNKMIW VIEHYYPVEYQIGSEAITMINDRLNCHLMQPEAGFIAMHIVNTSSSCSMEEIKNEMKDMK AICKLVSYHFDIQINEDSMNYLRFVTHLKFFIQRVKHKQLLNKIEQSDELFSIICKKYFQ SYLCVEKIEKYFLKTYDAEISDEEKMYLVLHIERVVNNI >gi|312957890|gb|AENW01000002.1| GENE 86 100565 - 101014 150 149 aa, chain + ## HITS:1 COG:no KEGG:Bmur_0604 NR:ns ## KEGG: Bmur_0604 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: B.murdochii # Pathway: not_defined # 19 149 5 136 146 67 35.0 2e-10 MEVHMNKDIQILTSEHNGLIGNLIHELDKKTLTVYNTALKEFNITFQQAMIILFIYVSKE EIYQKDIEKQMGLTNPSVTALMRNMISKDFVYRIQSIKDARYFHLHLTPKSLSMVDEIAS KIIKTNKILLAPLSKEEVVTLQRLLCKLL >gi|312957890|gb|AENW01000002.1| GENE 87 101499 - 104009 2956 836 aa, chain - ## HITS:1 COG:L119891_1 KEGG:ns NR:ns ## COG: L119891_1 COG1136 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 1 285 3 278 290 188 41.0 4e-47 MLELKHIAKTYKTAKGVKTEALKDINLRFPQRGMVFVLGKSGSGKSTLLNIIGGLDQADA GEIIINGKSSADFKQSDYDSYRNTYVGFIFQEFNLMEEYTIEKNIAMALQLQQKEASHAD IEEMLKRLGLSGYAARYPNELSGGQKQRVAIARALIKEPEILMADEPTGALDSATGKEIF DTLKELSREKLVIVVSHDRESAQAYADRIIEFKDGVVEADSAPDVEEHAEVFEAIHSHLP FKDSFRLGFSCLGHKKIRMVFTILLTSFALLLLALSDAVGNFSSVNAQYKAAEELQEQYA GVRYQYIDDQGNVIYTGMDTQIKDADIKTVLKENPQQKFAKVYSWDTMPLRLGDLGIEEL DSTAYSAAVEQYKLTEMSSFDVLGFKDIKGRFPKDYKEMAISSYLADIILTQGIADEKGK LQFPKSYDDILQNVKLPIGDTWMRISGIVSKDTSKYESLKKVSANNIDSETYKLVREFRN IANISSNKLYVKEGFVNTVKQQKGTVLDSSRHNLFLRVNDEDKGMSSLAYPAQAVSYYDG TGMVSTKSVKKDEILLSPDMLMFILGKSESFYSDAMVKKSTEEIRKTLQDHAKRLIGRNV ELHVDEGFGNSGELLKQQVRIAGILMPEGTFSMEDVYQINDNIVNKELIAPYIPDTLYVS ELLSSFDDTTLKPFLEKYEINNNLYANTVATQDVKSIKDFASFATKVFFYASIALFIFAA VLMMNFIIVSISYRKKDIGILRAIGARSTDVLKIFIWEGVMLAAISYVITMIGLQLVTLI TNNFAKDEIGVLISPVIITLRQPLLMLVIVAVVTFIACILPVTRIARQRPIDAIKK >gi|312957890|gb|AENW01000002.1| GENE 88 104380 - 105711 1285 443 aa, chain - ## HITS:1 COG:no KEGG:SSA_0231 NR:ns ## KEGG: SSA_0231 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 11 426 14 429 429 151 26.0 6e-35 MLKKNFNYFTMFATGLFFCVLGFSFIFDSLAVWNWLYTTLVIGISVAGVIRIFNMILNYR KLKHKGGQFLDIIVWLIAIIISLAIPETFFAIFPRLIGCWILLHAIIKIIVFYIKIKDRL PIPFMKVIFLCGDLIIAFFLIVNPGAHEDVISFFLGAYFLIYGGNTLLDLIREILPSGSG DKLDQKIQLSVPPVLSAVIPPHLMSTLLNKDKEDEIKERFDAIKEDIPVDMEVLIHLAPS GPAMFGHADVVYRGLVISYGCYDPHNRHLFGTLGDGVVIIAPKDTYIRNCLENENKTLIG FGVSLNEEQKKRLNDRILEVFETFCDFECDEQLKQKGLPCKGACDDYLSRVTRTSPEARF YKIREGKLKTFFVVSSNCVFFLGNLLSSIGLNLFDLSGIISPGAYYDFLNKQFKSHKGFI VSRRLYRKKDANQFDQSMSEFHK >gi|312957890|gb|AENW01000002.1| GENE 89 106277 - 107869 1432 530 aa, chain - ## HITS:1 COG:no KEGG:Mbar_A0080 NR:ns ## KEGG: Mbar_A0080 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 9 530 9 522 522 152 27.0 5e-35 MLGDILLLFRIRMTRKVNGFFYYFKKLPLIGRLLKESCYAAVNLKGVLSVFSFLVDVLMN LLKNLLYLFVVIAVPLINLQKGANDVQIRNGFLFGFVLLSLVAGSISNSKLLTADDETFI LSRQMHMAARRCLCSRSWYSYSMNAIGLFLACLLLSFMFSFPFWYAFMAGFGYLGSHQCM DMLQMRRFQRKNSFYLQANTWKLLIPLGSLILLYALYWLNVDFSFTPWLFCIFALVCAAA IIPYLRFESSYHAYSELLTCLLVENYEILKLDSSQMKQMEVAVDEKSYTSEELQYRTKNT GYALLNELFFRRHKHLIYKPVRFRLAVMTALWLAGTCLLIVLKDDMKLTKDILELLPPFV FLSYILSISQRVCKAMFMNCDVSLLHYSYYRSREAVLVNFRLRLKKLCYYNLLLIMVLCL YMNSTVVLVGLPYTLSTLLLFDFALLCLAVFFSVHYLFVYYIFQPYNEQFDMKNPFMSIL NGLVYLFCYFCMQLEGSLLFVSGVLAATLLYIPIALLLVYRLAPKTFHLK >gi|312957890|gb|AENW01000002.1| GENE 90 107859 - 108569 184 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 3 209 5 216 311 75 27 1e-12 MKLHIQNVKKTYDDKEVLKGGSAVFEHGKIYGLLGRNGSGKTTLFNCISHEIPCEGDVLI EEHGELRKVEDRDIGYAYSSPILPEFMTGFEYIRFYMDIHAKEIDSAKTIDSYFDLMRIV AEDRHRLIKGYSHGMKNKLQMLGFLISRPKIILLDEPLTSFDVVVANEMKHLLLEMKEEH ILIFSTHILQLARDLCDEIVLLHNGVLEQLDHDLLQQNDFEDRIVSLLQEEVKHAG >gi|312957890|gb|AENW01000002.1| GENE 91 108792 - 109814 988 340 aa, chain + ## HITS:1 COG:no KEGG:Plav_0415 NR:ns ## KEGG: Plav_0415 # Name: not_defined # Def: hypothetical protein # Organism: P.lavamentivorans # Pathway: not_defined # 12 340 10 339 339 360 52.0 4e-98 MRNHEVTQRHPLLDEHGSLKEAGWSRSLLQEYRREDIKAKRWRIKEWDYYLILNDFYGVA FTISDDGYIGLQSVSLLDFKKGWEHTETILNAFPMGKLKLPTSSESGSCRYRDKRLDMEF QVMKGKRILRCDFQNFYEGKPFHCEITLHQPDMDSMVIATPWKEKKTAFYYNQKINCMRA EGNVSFDGNTIHFDPQDAFGTLDWGRGVWTYDNTWYWGNGNGLVEGKPFGFNVGYGFGDT TAASENLLLYDGVAHKLEDVTFHIPPDSYLKPWRITSSDARFEMSFRPILDRCAKTSALI IVTDQHQVFGYLSGTAVLDDGSILKLEDMLCFFEKVHNRY >gi|312957890|gb|AENW01000002.1| GENE 92 109925 - 110449 330 174 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160913571|ref|ZP_02076261.1| ## NR: gi|160913571|ref|ZP_02076261.1| hypothetical protein EUBDOL_00047 [Eubacterium dolichum DSM 3991] # 15 168 17 167 173 85 33.0 1e-15 MKTKIRLSFIFACAIILSACDFSKDSVDPKDYMNNNYKNHEQLNVIEDKQSLLYLLKQRD TYHLLIFKKDGSSYSYEGGRESDTPFGYMKVGTPDNIHIVIFIDNSIVKAERYEFDLRAS KNDKDKLTISLDGLSNLDTYLIKSYDFLPPYSSISQLRFYDKHGKRIDETVLID >gi|312957890|gb|AENW01000002.1| GENE 93 110595 - 111296 996 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402531|ref|ZP_06646666.1| ## NR: gi|293402531|ref|ZP_06646666.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 233 1 212 212 176 50.0 9e-43 MKKIIPALAVIAGAAALVAYKLKKDEEKQIVDLDQGLLEDEDDLNEMDMDDEIEEGPISD PASCMETVKKEAADAAEDLKDLAKDAFEEGKEAAEDFADAVKDQAAEAKDIVQDAAEEFD TDFPSLLKSETAALKEQAKKLMDDMLQEGDVHENERPVQHSVVFQTAEDMDSFKNEVINK GFVITRGDEDLELIVLHITPIDDVKLMGNILYIAGEAKLHHGKYQGWSSKVIY >gi|312957890|gb|AENW01000002.1| GENE 94 111422 - 112003 879 193 aa, chain - ## HITS:1 COG:BS_yrrM KEGG:ns NR:ns ## COG: BS_yrrM COG4122 # Protein_GI_number: 16079790 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Bacillus subtilis # 4 192 23 216 217 157 45.0 1e-38 MTLIEEMEMYAHEHDVPIMQKEGIDFMCSFLKEHNLKHVLEIGSAIGYSAIRMAMLDMDI QITTIERDKDRYDQAVEYVKRSGLQDRITLLFGDALETVVEGSFDMLFIDAAKAQYTKFF ERYEPLLKKGGYVITDNLKFHGLVEHPENIKSRNLRSLVRKIGNFVEYLKQREDYDTQFY DFGDGVGISRKKV >gi|312957890|gb|AENW01000002.1| GENE 95 112000 - 113178 1515 392 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 6 287 54 330 430 143 33.0 5e-34 MKKLMVLMLSLLLCACSTSENKEKETPKEDPKNENTTVSFVGVGDNLIHEMIYKQADAAA GEMNDGKYDFTEMYTHVKKDIQKADLAYIDQESIVGGDALGISGYPTFNTPADIAKNVAD TGFDIVNTANNHCLDKYQEGIDYSHEIWAKQKGIITAGTYTSQKDRDTIRTIKRKGITFS FLAYTYGTNGIEPPNPYSVAYFDEDRIREDVKKAKQLSDVVIVSAHWGDENVSAPTEFQK KYAKLFADLGVDVVVGEHPHVIQPVTWMDGKDGNKTLVIYSLGNFLNGMLDVNNVLGGMI RFDFVKDAKSSEISIQNVKWEPLITHYTGDAADIMNTRKNFTVYKLSDYSEELAEQHGLN GVDGQKVRLNDLYARTKKVITEIPVIEKGDTK >gi|312957890|gb|AENW01000002.1| GENE 96 113175 - 114161 1201 328 aa, chain - ## HITS:1 COG:CAC3297 KEGG:ns NR:ns ## COG: CAC3297 COG1876 # Protein_GI_number: 15896541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 141 328 56 241 241 129 37.0 8e-30 MRKQLMILMTAGFLLAGCNSNEEEDVLKQYGVEDTKSCDNLAAVKQAGDKLVKDKGSVYC AITTDKNLDQATAFVKKDYDAKRISEFLKLPYYHKELTERYIAYDDGKRAVQDIVTKVNI GLDQPYFTNVDIIRDTDDVALLVNKYHRLPDDYEPKNLVKTPNACVIGEDFSCQSEPQYL RKEVANAFSELVKAGKEKQINIKAIASYRSFAYQKNLYDYYEQSQGKEYADKYYARPGQS EHNSALAVDVTINNENFNEIENSEHYDWLLKHIADYGFILRYPEDKVDVTGYQYESWHLR YVGKDIAKEIVKQGLTLDEYIARKDVQK >gi|312957890|gb|AENW01000002.1| GENE 97 114372 - 115538 1026 388 aa, chain - ## HITS:1 COG:CAC3297 KEGG:ns NR:ns ## COG: CAC3297 COG1876 # Protein_GI_number: 15896541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 181 387 32 236 241 144 37.0 4e-34 MRMKKKVLIAGIAIILAASAVVGYIWSQNQKKEQDYAKMEITFQKDRQILEYGEKIDSRS FVKHSFGEVKTYPNVNTKKTGSHTITYVLTYEGQTKKIPYTVEVKDTRKPTIKLKENHIT LEYGQKYDVADNIKSVRDPIDGPLKKANKKAAGSYWIDSKLNVLEAGSYTITIHAQDLNG NSAEKKFTVTVEKKKEPELKEKNPSSSDEASSSQTEGSEAASVEPYYVNGVLLVNKKHAL PQNYGGMDSNAYAALQQLQAGAEAAGYSMPLISGYRSYAYQASLYNSYVAQDGQELADTY SAGPGHSEHQSGLAFDIGALDNGYGNTPGGRWLNAHCADYGFILRYPAGKESITGYQYEP WHVRYVGKEIASRIMSQGITLEEYLGDV >gi|312957890|gb|AENW01000002.1| GENE 98 115942 - 116307 382 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|205372041|ref|ZP_03224858.1| 50S ribosomal protein L17 [Bacillus coahuilensis m4-4] # 1 120 1 120 120 151 62 1e-35 MWNRKLGRKADHRKALLRNMATSVIAYGQIETTEMKAKELRSVVDELITLAKRGDLHARR QAASFVRDVVVNEETGQTALQKLFEEIGPAYADRKGGYTRVVKTRVRRGDAAPMAIIELV K >gi|312957890|gb|AENW01000002.1| GENE 99 116335 - 117294 773 319 aa, chain - ## HITS:1 COG:BS_rpoA KEGG:ns NR:ns ## COG: BS_rpoA COG0202 # Protein_GI_number: 16077211 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus subtilis # 1 316 1 311 314 321 54.0 1e-87 MQKFERAHFEVKEYDESQHYGKFVFEPLERGFGTTIGNALRRVLLSSLPGAAVFSIKVDG VYHEFTSIPGIVEDVTAIILNIKTLVMSIQDDEIYTLRISKQGPGAVTGADIICPEGVEV ISKDLHICTLEEGGMLEMELQARIGRGYVSADTNKQLYQTPNQPLGIIYTDSIYTPIEKV SYNVEPTRVGQDAHYDKVALEIWTDSSLSPAEAVALASKILIDHLELLTNVHEAVNDMES VMKEAQGEVQNKGLVMMIEDLDLSVRSYNCLKRAGIQTVEELTQRTEDEMMRVRNLGKKS LKEVKDKIYDLGLSFKSYE >gi|312957890|gb|AENW01000002.1| GENE 100 117323 - 117721 503 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56961958|ref|YP_173680.1| 30S ribosomal protein S11 [Bacillus clausii KSM-K16] # 1 131 4 132 133 198 73 1e-49 MAKNVKANSRGKRKARKNIARGVAHVHSTFNNTIVTITDENGNAVAWSSAGALGFKGSRK STPFAAQMAGEAAGKAAIENGMKVIAVSVKGPGPGREAAVRALQVAGLEITLINDVTPIP HNGCRPPKRPRG >gi|312957890|gb|AENW01000002.1| GENE 101 117743 - 118108 502 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637979|ref|YP_002314499.1| Ribosomal protein S13 [Anoxybacillus flavithermus WK1] # 1 121 1 121 121 197 78 2e-49 MARIAGVDLPRDKRVVVSLTYIYGIGRSTSEKILAKTGISEDIRVKDLTEDQVNAIRNEI DGVKVEGDLRREVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPVRTVANKK K >gi|312957890|gb|AENW01000002.1| GENE 102 118124 - 118240 190 38 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|18311362|ref|NP_563296.1| ribosomal protein L36 [Clostridium perfringens str. 13] # 1 37 1 37 37 77 89 3e-13 MKVRPSVKPICDKCRIIKRKGRVMVICENPKHKQRQGN >gi|312957890|gb|AENW01000002.1| GENE 103 118265 - 118483 283 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 113 76 4e-24 MGKQDVIEIDGVVVDTLPNAMFKVKLANGHEILAHVSGKIRMHYIRILPGDRVTVEISPY DLTRGRITFRHK >gi|312957890|gb|AENW01000002.1| GENE 104 118476 - 119213 608 245 aa, chain - ## HITS:1 COG:BH0156 KEGG:ns NR:ns ## COG: BH0156 COG0024 # Protein_GI_number: 15612719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus halodurans # 1 234 13 246 248 284 59.0 9e-77 MRKAGIIVALAHRAASAAMQPGITTQELDRIIENVILENGATPSFKGLYGFPAAACISIN SVVVHGIPGDTVLCDGDIVSVDIGACYQGYHGDSAWTYGVGKLSEEDQRLMRVSEESLYE GLKMARAGNHLTDISHAIGEYVFTHGYSIPRDYAGHGIGTSVHEDPTVPNFGPAGRGILL QEGMTLAVEPMVHAGKPQTRMLKDGWGVVTRDGSKAAHFEHTIVITNRGYEILTTLNKEE RPDNG >gi|312957890|gb|AENW01000002.1| GENE 105 119252 - 119899 750 215 aa, chain - ## HITS:1 COG:MA1096 KEGG:ns NR:ns ## COG: MA1096 COG0563 # Protein_GI_number: 20089966 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Methanosarcina acetivorans str.C2A # 1 215 1 213 215 211 49.0 7e-55 MNILIMGGPGAGKGTMSAKIVEKFNVNHISTGDIFRSEIGKGTALGMEAKSFMDKGLLVP DEVVNNMVKSYLEKLEDKKNGFLLDGYPRTLDQAKAFDALAEGSELAIDKVIALEIDFEK LADRVTGRRICKECGEIYHIKSKPSKTDNVCDVCGGELFQRKDDTVESLTVRLEEYSSQT APVLDYYDSKGIVTRIDASQPIDSVWNDTLTALEK >gi|312957890|gb|AENW01000002.1| GENE 106 119919 - 121223 674 434 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 5 434 14 439 447 264 35 2e-69 MFRTFADMFKNKDIRNRIFFTLAMLFVFRFGSAITVPGVDVTELIKGMQDSSLFAMINML GGGGLEQLSIFAMGVGPYITASIIIQLLSMDVIPALTELAKGGATGKKQIDRYTRYLAVV LSFFQASTLVYSFSTQYKTLLVNGSGWASILYVATLLTAGSMFILWIGDRISMKGIGNGV SMIIAAGIISRLPYQFTTAWQTLVDPSNSSATFNGILTFGLYIVSYLLIIVFVVFMQTAE RKIPIQYTSSTVTTRKKDMTYLPLKINSASVIPVIFASAIMVAPLQICKMVWPAASWVKT LETYMGMQTPVSLVIYVVLILLFTFFYTKLQVDPEKIAENLGKSGTYIPGIRPGTETKEY VNKVLCRITVLGAIGLAFIAVLPHALPLIPGINLPQSMGIGGTGIIIVVGVAMETVKQIE GRLTQKSYRGFLQR >gi|312957890|gb|AENW01000002.1| GENE 107 121226 - 121666 559 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229542184|ref|ZP_04431244.1| ribosomal protein L15 [Bacillus coagulans 36D1] # 1 146 1 146 146 219 74 4e-56 MKLHEMKYTEGARQKSYRVGRGHGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLARR LPKRGFTNFNRKEYAIVNVASLNGFEDGTEVTPELLIECGLVKKELDGIKILGEGELEKR LSVKANKFSKSAIATIEQAGGKAEVI >gi|312957890|gb|AENW01000002.1| GENE 108 121682 - 122194 481 170 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|159901442|ref|YP_001547689.1| ribosomal protein S5 [Herpetosiphon aurantiacus ATCC 23779] # 1 169 1 168 182 189 57 5e-47 MERRPRRNRDAEKEFEERVVTINRVTKVVKGGRRFRFAALVVIGDKKGRVGFGTGKANEV PDAIKKAIEDAKKNVFTVPVVGTTIPHAITGRYGAGEVFLRPASEGTGVIAGGPVRAVLE LAGINDILSKCLGSRTPINMVRATISALKDLKTIEEVARLRGKKPEEIRG >gi|312957890|gb|AENW01000002.1| GENE 109 122207 - 122563 443 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755928|ref|ZP_02428055.1| hypothetical protein CLORAM_01448 [Clostridium ramosum DSM 1402] # 1 118 1 118 118 175 74 1e-42 MLKKVSRNDERMRRHVRVRTKISGTPECPRLNVFRSNSNIHAQIIDDVNGVTLASASSVE LKLENGGNVEAAKTVGTEIAKRAIEKNITGVVFDRGGYVYTGRVKALAEAARVAGLKF >gi|312957890|gb|AENW01000002.1| GENE 110 122585 - 123130 616 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|218895260|ref|YP_002443671.1| ribosomal protein L6 [Bacillus cereus G9842] # 1 178 1 178 179 241 67 1e-62 MSRIGNKAITIPAGVEVTIAAGNEVTVKGSKGTLTRQFNPALGIKVEENVLTVTRPNDEK HVKQLHGTTRALLANMVEGVSEGFTKELELVGIGFRAAVSGSKLTLNVGYSHPVEFAVED GLKVECSSATDIKVSGIDKQRVGEFAANIRAVRKPEPYKGKGIRYKGEYVRRKEGKTAGK K >gi|312957890|gb|AENW01000002.1| GENE 111 123152 - 123547 462 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637968|ref|YP_002314488.1| Ribosomal protein S8 [Anoxybacillus flavithermus WK1] # 1 131 1 132 132 182 68 8e-45 MIMTDPIADMLTRVRNALQARHETVEIPANKEKVEIAKILKNEGFITDYTVDGDVKKTIT VTLKYGPNNEKVINGLKRISKPGLRVYAKVDSIPRVMNGLGIAIISTSHGVITDKEAKAK HVGGEVIAYVW >gi|312957890|gb|AENW01000002.1| GENE 112 123569 - 123754 303 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23097587|ref|NP_691053.1| 30S ribosomal protein S14 [Oceanobacillus iheyensis HTE831] # 1 61 1 61 61 121 86 2e-26 MAKKAMVNKSKRPQKYKVREYTRCERCGRPHSVLRKYKLCRICFRELAYKGQIPGVKKAS W >gi|312957890|gb|AENW01000002.1| GENE 113 123771 - 124310 707 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229136968|ref|ZP_04265595.1| 50S ribosomal protein L5 [Bacillus cereus BDRD-ST26] # 1 179 1 179 186 276 73 3e-73 MNRLEQKYKEVVTPSLMKKFNYKSVMEVPHVDKIVINMGIGEAISNPKVLDEAVAELAQI TGQAPVITKAKKSIANFKLREGMPIGCKVTLRKEKMYDFMDKLMNISLPRVRDFRGVSAT SFDGRGNYTLGVKEQLIFPEIDYDKINKVRGMDIVIVTTANTNEEAKALLEEMGMPFKK >gi|312957890|gb|AENW01000002.1| GENE 114 124323 - 124646 312 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755923|ref|ZP_02428050.1| hypothetical protein CLORAM_01443 [Clostridium ramosum DSM 1402] # 1 106 1 105 111 124 60 2e-27 MKIKKGDKVQVITGAYKGTIGEVTKVFPKEDKVIVEGVNLVKKHLKPTQVNPDGGIIEKE APIHVSNVMAYDSKAKKASRVGYETKTDKKGNTEKVRVYKKTGAEVK >gi|312957890|gb|AENW01000002.1| GENE 115 124659 - 125027 513 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|222529720|ref|YP_002573602.1| ribosomal protein L14 [Anaerocellum thermophilum DSM 6725] # 1 122 1 122 122 202 80 9e-51 MIQNESRLRVADNTGAKEVLVIRCLGGSVRKFSNIGDIVVCAVKQAAPGGTVKKGDVVKG VIVRTKRGVRRDNGTYIKFDDNAVVLIKDDNTPRGTRIFGPVARELRDKDFMKIVSLAPE VL >gi|312957890|gb|AENW01000002.1| GENE 116 125045 - 125305 338 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900154|ref|NP_344758.1| 30S ribosomal protein S17 [Streptococcus pneumoniae TIGR4] # 1 84 1 84 86 134 77 2e-30 MERSNRKVYRGTVVSDKMDKTITVIVETKKTHPLYGKRVKYSKKFKAHDENNEARMGDKV EIMETRPLSATKRFRLVKIVEKAVQL >gi|312957890|gb|AENW01000002.1| GENE 117 125322 - 125522 205 66 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|20808652|ref|NP_623823.1| 50S ribosomal protein L29 [Thermoanaerobacter tengcongensis MB4] # 1 63 1 63 66 83 68 5e-15 MTAKEIREKSNTELLQEIETLKDELFNLRFQQATGQLTNTARMKTVKKTIARIKTVMTER ELGSQD >gi|312957890|gb|AENW01000002.1| GENE 118 125525 - 125941 557 138 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|222150452|ref|YP_002559605.1| 50S ribosomal protein L16 [Macrococcus caseolyticus JCSC5402] # 1 135 1 135 144 219 78 7e-56 MLMPKRTKYRRPHRLSYEGRAKAGREVSFGEYGLMADTGAYVSNRQIEAARIAMTRYMKR GGKVWIRIFPHMARTKKPLEVRMGSGKGAPEGWVAVVKPGRVMFEIAGVPEEVAREAFRL AAHKLPVKTKFVVRKGEK >gi|312957890|gb|AENW01000002.1| GENE 119 125945 - 126736 581 263 aa, chain - ## HITS:1 COG:SPy0056 KEGG:ns NR:ns ## COG: SPy0056 COG0092 # Protein_GI_number: 15674293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosomal protein S3 # Organism: Streptococcus pyogenes M1 GAS # 1 211 1 210 217 275 66.0 7e-74 MGQKVSPIGLRVGVIRDWESRWYADKDYADLLLEDVKIREFLFAECKNASVSRVEIERSK NRVEIMIRTARPGVIIGTNGENVEMLKKKVEKLTGGKNIYLKVLEIANPDLDAKLVARSI ADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLRA DIDYAWEEASTTYGRLGVKVWICRGEVLPGQMVQEPEAPKNNMNDRRRNRRGNRGGNRNN SQRNNNNRSSAGGNAPRKAEGGK >gi|312957890|gb|AENW01000002.1| GENE 120 126748 - 127083 341 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126680609|gb|ABO26531.1| ribosomal protein L22 [Acholeplasma palmae] # 1 111 1 111 111 135 63 8e-31 MEVKSTAKTLRIPPRKARIVIDLIRGKDAAEAAAILKFTPNVAAEAVGKVLKSAVANAVN NHDMDEEKLYVKACYANEGVTLKRFMPRAKGSASAIHKRTSHITVVVDERD >gi|312957890|gb|AENW01000002.1| GENE 121 127099 - 127377 413 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755916|ref|ZP_02428043.1| hypothetical protein CLORAM_01436 [Clostridium ramosum DSM 1402] # 1 90 1 90 92 163 83 4e-39 MSRSLKKGPFCDDHLMKKVDELNKAGKKQVIKTWSRRSTIFPQFVEHTFAVYNGKEHLPV YVTEDMVGHKLGEFVPTRKYGGHGDNDKKAKR >gi|312957890|gb|AENW01000002.1| GENE 122 127397 - 128230 1171 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755915|ref|ZP_02428042.1| hypothetical protein CLORAM_01435 [Clostridium ramosum DSM 1402] # 1 277 1 277 277 455 79 1e-127 MPIKKYKPTTPGRRGMTSLSYEEITTDKPEKSLLEPLKSKGGRNNNGRITTRHQGGGHKR AYRVIDFKRNKDGIPARVATIEYDPNRSANIALLNYADGEKRYIIAPKGLTVGMNIISGE GADIKVGNAMELKDIPEGTFIHNIELRPGKGGQLARSAGASAQILGVEEKYTTVRLASGE VRRILSNCRATIGQVGNEDHSLVNYGKAGRMRWKGVRPTVRGSVMNPNDHPHGGGEGRTP VGRKSPMTPWGKKAMGVKTRKAKKASTKLIVRRRNGK >gi|312957890|gb|AENW01000002.1| GENE 123 128290 - 128586 286 98 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755914|ref|ZP_02428041.1| hypothetical protein CLORAM_01434 [Clostridium ramosum DSM 1402] # 1 96 1 96 96 114 56 2e-24 MENYKDIIIRPIITEKTMRYMDADNKVTFEVKKGTNKTQVKQAVEAIFGVDVEKVNIVNV KPKTKRMGKYVGTTKNVRKAYVKIKEGQDINLFGEEAE >gi|312957890|gb|AENW01000002.1| GENE 124 128586 - 129215 671 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637955|ref|YP_002314475.1| Ribosomal protein L4 [Anoxybacillus flavithermus WK1] # 1 209 1 207 207 263 61 4e-69 MPKMVVLSQTGKELNEITLADTVFGIEPNQQCIFDAVIMQRASMRQGTHDTKNRTEVRGG GRKPWRQKGTGRARQGSIRATQWRGGGIVFGPTPRNYGYKLNKKVRRLALKSALSEKVLE NAMSVVDKFELEAPKTKAFNQIIADINAPKKTLFVVSEGEDFENAFLSMRNIPTMMMLTA DGLNVYDIVNANKIVFTEAAVKDVEEALA >gi|312957890|gb|AENW01000002.1| GENE 125 129219 - 129905 630 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637954|ref|YP_002314474.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1] # 1 212 1 208 208 247 57 3e-64 MKGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRS TKGEAGHAAKANTAPKRFVKEVRDSEFADLELGAEVNVGIFSAGETVDVIGTSKGKGFMG TIVRNNAKIGPKSHGSGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLTVI KVDVENNYLLIKGNVPGPKRGMVMVRTAKCSKGNTEPVTLVDYTKEEE >gi|312957890|gb|AENW01000002.1| GENE 126 129919 - 130230 396 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|192813593|ref|ZP_03042253.1| ribosomal protein S10 [Geobacillus sp. Y412MC10] # 1 103 1 102 102 157 74 3e-37 MAKNSVRIRLKAYEHRILDASAEKIVQAAQAHGAKKIVGPVPLPTEKQVVTILRAVHKYK DSREQFEIRTHKRLIEIVGPTAETIDSLSRLELPSGVDIEIKL >gi|312957890|gb|AENW01000002.1| GENE 127 130528 - 131256 673 242 aa, chain - ## HITS:1 COG:CAC1397 KEGG:ns NR:ns ## COG: CAC1397 COG0084 # Protein_GI_number: 15894676 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Clostridium acetobutylicum # 1 225 1 234 252 108 29.0 9e-24 MIVDAHMHMEEAYPAEILKEQDIACIANAATPEEYKNLRKLQEKNPFLWISAGIHPWKVD EVHWDAMLPILEEVDIIGEIGLDTVWCNTDMTLQSRLFEQQLAFAQRYQKPVILHLKGRE KEALEYLRHYENRYLVHWYSCDAWLQEYIDLGCWFTVGPSLPFDEAVQHVAACVPLDRML VETDGISACTWCENRKVAPKEHGAILKRSMHKISEIRNISYEKLQEQMVLNCEKFIGQRF PF >gi|312957890|gb|AENW01000002.1| GENE 128 131246 - 131986 223 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 3 217 12 229 312 90 30 4e-17 MKLRVEDMAISFDNRRILEHVGFHVEEGEFTALIGPSGCGKSTLLNILAGLLDCEEGTFY VDDVQVSGVSSHFAYMPQDDLLLPWKNILDNVCLYGKLHGHVKEAREQALQEFEAFGLKG YEQAYPYELSGGMRQRAAFLRTALCSADILLLDEPFGALDVITRNDMQDWLLKLRSELNR TMLLVTHDIEEALYLADRILILSGSPASICREISLKDYKKSREWLYDQGGLKKEIYQLLK EGTHDR >gi|312957890|gb|AENW01000002.1| GENE 129 132010 - 133008 1204 332 aa, chain - ## HITS:1 COG:CAC1400 KEGG:ns NR:ns ## COG: CAC1400 COG0715 # Protein_GI_number: 15894679 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Clostridium acetobutylicum # 2 332 4 333 333 329 52.0 5e-90 MKKLGCMLMAVLMAVAVSGCSDKKEASENKETEKKVTLILDYLPNTNHTGFYVAKEKGFF KEEGLDVDIIEPGDDSTSATLVAANKGEFGVSYQEDVTYARTAEEPLPIRAIATIIQHNT SGFVSLKKENIKSPKDFEGKVYAGWQAPSEEAVVKAVMTAAKADFSKLTMVGADGSGFAS LGKSVDIQWEFEGWAVTKGRMEGYDLKYIPLRELDERLDYYTPVIITSEKMIKEDPETVQ KFMNAVKKGYEYAIEHPDAAAEILSKYAPDYDLKFLKESQKYLSSEYARDADSWGVMKDS VWDNYTAFMYENKLITEKIKADEQYTNEFVTK >gi|312957890|gb|AENW01000002.1| GENE 130 133005 - 133772 877 255 aa, chain - ## HITS:1 COG:CAC1399 KEGG:ns NR:ns ## COG: CAC1399 COG0600 # Protein_GI_number: 15894678 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Clostridium acetobutylicum # 10 220 13 223 250 163 40.0 2e-40 MKRLKRIGMPLFTLLLVLAVWEGCVHIFDIDLYILPAPSNIIQALFANRDILWMHSLVTL QEAVVGLLIATLLAIVIAIGMDLSQPFKHSIFPHLVVTQTVPVMVLGPLFSIWLGFGMAP KILMVIFMCFFPVAIAFCDALGKVDEHQISLLKSFGAKKWQIYAYVKIPAASTALFSGLK VAATYCIGGAIVGEWLSASAGLGYYMIRVKNGYMLDKVFACVVVIIALSLLLHGAVVLLE AVLFPYARKKRGKAK >gi|312957890|gb|AENW01000002.1| GENE 131 133978 - 134289 482 103 aa, chain - ## HITS:1 COG:BH0643 KEGG:ns NR:ns ## COG: BH0643 COG0393 # Protein_GI_number: 15613206 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 1 100 1 101 106 97 56.0 7e-21 MILVNTDYITGKTLNMLGLVKGSTIQTKNIGKDISQGFKTLVGGELKAYNEMMNEARALA TKRMVEEAEALGADAIVNIRYASSAIMGGAAEVIAYGTAVTFL >gi|312957890|gb|AENW01000002.1| GENE 132 134270 - 134476 144 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402494|ref|ZP_06646629.1| ## NR: gi|293402494|ref|ZP_06646629.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 68 5 72 72 70 69.0 4e-11 MLAPIIIGILIAFYMMIWISSLFFLDAPEFLVILFGIPMLALLFLWIHVVKERLDEIRSG EEDDLSKY >gi|312957890|gb|AENW01000002.1| GENE 133 134590 - 135774 1422 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 394 1 407 407 552 67 1e-156 MAKEKFDRSKTHVNIGTIGHVDHGKTTLTAAITNVLAKDGMAQAQAYDQIDGAPEEKERG ITINTAHVEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMPQTREHI LLARQVGVPYIVVFLNKCDMVDDEELIDLVEMEVRELLSEYGFDGDNAPVIRGSALKALE GDDKYVGAIKELMDAVDEFIPDPTRETDKPFLMSVEDVMTITGRGTVATGRVERGVVKLG EEVEIVGIKDTQKTVVTGLEMFRKQLDFAESGDNIGALLRGINRDQIQRGQVLAKPGSVH PHTKFKAQVYVLTKEEGGRHTPFVSNYRPQFYFRTTDVTGVITLPEGTEMVMPGDNVEMN VELIAPIAIENNTKFSIREGGRTVGSGNVTEIIE >gi|312957890|gb|AENW01000002.1| GENE 134 135843 - 137921 1825 692 aa, chain - ## HITS:1 COG:BH0131 KEGG:ns NR:ns ## COG: BH0131 COG0480 # Protein_GI_number: 15612694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Bacillus halodurans # 1 691 1 692 692 1003 71.0 0 MPRQYSLENTRNIGIMAHIDAGKTTTTERILYYTGVNHKIGETHDGASTMDWMAQEQERG ITITSAATTAAWKGTRINIIDTPGHVDFTVEVERSLRVLDGAVTVLDAKAGVEPQTETVW RQATTYGVPRIVFCNKMDATGADFLMSCKTIVDRLGAKSCPIQLPIGAESTFTGIVDIIK RKSEIYTNDLGTDIQEGDVPEDLKDLCEEYRSKLIDYLADYDEDFMMQVLEGEEPSVEDI KRVLRIAVCAGDFFPVLCGSAYKNKGVQMVLDAVVEYLPSPLDVPAIKGTLEDGSESERH SSDEEPFAALAFKIATDPFVGKLSFFRVYSGTAKAGSYVLNSTKGKRERFGRIVQMHANA RKEIDQVYAGDIAAAVGLKVTTTGDSLCAEDSPIILESMEFPEPVIELSLEPKTKADQDK MGLALAKLAEEDPTFKTYTDQETGQTIIAGVGELHLDIIVDRLRREFKVEANVGQPMVAY RETIRGTAECEGKYIKQSGGRGQYGHVWIKFEPQEEGKGFEFVDATVGGSVPREYIKPTE EGLRDALANGIIAGYQVIDIKATLFDGSYHDVDSSEMAYKIAASMALKAAAKKCNPVILE PIMMVEVTAPNEYLGSVMGDVSSRRGAIVDQEERGNAIIVKAHIPLSEMFGYVTDLRSFT QGRGNYSMKFDHYAEVPKSIAEKIIKNNSSEN >gi|312957890|gb|AENW01000002.1| GENE 135 137937 - 138407 545 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|77406278|ref|ZP_00783345.1| ribosomal protein S7 [Streptococcus agalactiae H36B] # 1 154 1 154 154 214 66 2e-54 MPRKGHVAKRDVLVDPIYNSKLVTRLINKIMIDGKRGVAQKILYNAFDIIEVKTNEKPME VFEKALENVMPLLELKVRRVGGANYQVPVEVSAERRLTLGLRWIVNYARLRNEKTMEQRL AAEIMDAANGSGASVKKREDTHKMAEANKAFAHYRW >gi|312957890|gb|AENW01000002.1| GENE 136 137937 - 138407 660 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212637950|ref|YP_002314470.1| Ribosomal protein S7 [Anoxybacillus flavithermus WK1] # 1 156 1 156 156 258 82 8e-68 MPRKGHVAKRDVLVDPIYNSKLVTRLINKIMIDGKRGVAQKILYNAFDIIEVKTNEKPME VFEKALENVMPLLELKVRRVGGANYQVPVEVSAERRLTLGLRWIVNYARLRNEKTMEQRL AAEIMDAANGSGASVKKREDTHKMAEANKAFAHYRW >gi|312957890|gb|AENW01000002.1| GENE 137 138433 - 138855 623 140 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56418636|ref|YP_145954.1| 30S ribosomal protein S12 [Geobacillus kaustophilus HTA426] # 1 140 1 140 140 244 85 2e-63 MPTINQLIRKGREQSVKLSKSPALNRGYNSIKKRPTNLSAPQKRGVCTRVGTMTPKKPNS ALRKYARVRLSNGMEVTAYIPGIGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDCAGV ANRNQSRSLYGAKRPKEAKK >gi|312957890|gb|AENW01000002.1| GENE 138 139073 - 139885 1048 270 aa, chain + ## HITS:1 COG:PM1555 KEGG:ns NR:ns ## COG: PM1555 COG0561 # Protein_GI_number: 15603420 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Pasteurella multocida # 4 262 11 265 270 104 29.0 2e-22 MAYKIVFFDMDGTLYQTENDIIQESSLQAIQALRDQGYIVCAATGRPLNQMNLILERVQF DYMVMINGGYVLDREQRLLFENPLDRQTTQDIVDWCEQQENGLMFHFGDTSYIYDKFYPF YYFCRDHHVLNYLFYDEQRSYHKRHNAYNAVLMTKEQRSLEEFLAKHPLLRSDLIEVAQD HFCFDVFNANNDKFVGINQVLQKEGISWEECICFGDSTNDIKMLEMAGMGVAMGSATDYV KSFANMVTASVYDHGTARALQKILNLQLKL >gi|312957890|gb|AENW01000002.1| GENE 139 140029 - 141381 1164 450 aa, chain - ## HITS:1 COG:BS_braB KEGG:ns NR:ns ## COG: BS_braB COG1114 # Protein_GI_number: 16080012 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 10 431 11 428 445 280 42.0 6e-75 MKKLTLIQIISVSMMLFAIFFGAGNMIFPPAMGQLAGTSYISALAGFILTDAGIAILGVT AVVLAGTSMSDLGNLVSRRFALVLSVGVYLLIGPLFALPRTGSVSFEIALLPYIGENNAI LWSLLFTTAFFGLTYYLSSNPSRIVDVVGKYLTPVLLISILAIFIASLLQDTSNGAFSFG TMMEPSPAYADIPFFKGMIEGYNALDGPAGLAFAILVITAIRSYGVTDKKYIARYTILCG LGAAGFLAGVYFMLTYVGAITNTPFTNGGALLHAVTNHLFGGIGGIILGIAVLFACLTTS IGLTTSFADYFQTILPKRWTYKRIAAAVCLFSFVISNIGLSQLITVSLPILIMIYPLTVV LMLLSFLKQRIGSRRMVYIMAMLFTFAVSFVNGMESAGVSLGIISDWFAELPFYELSIGW ILPAVAGALIGLLPFWPMNNEGSGLTETRE Prediction of potential genes in microbial genomes Time: Sat May 14 01:07:11 2011 Seq name: gi|312957683|gb|AENW01000003.1| Clostridium sp. HGF2 contig00023, whole genome shotgun sequence Length of sequence - 198541 bp Number of predicted genes - 202, with homology - 188 Number of transcription units - 84, operones - 48 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 7.7 1 1 Op 1 4/0.048 + CDS 135 - 2930 3031 ## COG0013 Alanyl-tRNA synthetase 2 1 Op 2 6/0.000 + CDS 2992 - 3249 310 ## COG4472 Uncharacterized protein conserved in bacteria 3 1 Op 3 . + CDS 3249 - 3662 550 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 3663 - 3690 -0.8 4 1 Op 4 . + CDS 3699 - 3959 390 ## gi|160915321|ref|ZP_02077534.1| hypothetical protein EUBDOL_01330 5 1 Op 5 . + CDS 3937 - 5007 1218 ## COG1559 Predicted periplasmic solute-binding protein 6 1 Op 6 4/0.048 + CDS 5017 - 5649 793 ## COG0572 Uridine kinase 7 1 Op 7 . + CDS 5675 - 6154 756 ## COG0782 Transcription elongation factor + Term 6157 - 6197 2.6 + Prom 6156 - 6215 2.1 8 2 Op 1 4/0.048 + CDS 6239 - 6703 647 ## COG1555 DNA uptake protein and related DNA-binding proteins 9 2 Op 2 4/0.048 + CDS 6700 - 8667 1843 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) + Prom 8716 - 8775 4.9 10 3 Op 1 . + CDS 8807 - 9766 1238 ## COG1466 DNA polymerase III, delta subunit 11 3 Op 2 . + CDS 9763 - 10965 1329 ## COG1760 L-serine deaminase 12 3 Op 3 . + CDS 10985 - 11485 579 ## COG0716 Flavodoxins 13 3 Op 4 . + CDS 11454 - 11753 236 ## COG2827 Predicted endonuclease containing a URI domain + Term 11967 - 12008 -0.4 - Term 11941 - 11989 5.4 14 4 Tu 1 . - CDS 12064 - 12717 689 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 12804 - 12863 5.9 + Prom 12904 - 12963 6.4 15 5 Op 1 10/0.000 + CDS 13004 - 15934 3800 ## COG1196 Chromosome segregation ATPases 16 5 Op 2 7/0.000 + CDS 15934 - 16905 772 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 17 5 Op 3 . + CDS 16898 - 17212 349 ## COG2739 Uncharacterized protein conserved in bacteria 18 5 Op 4 . + CDS 17228 - 18421 1373 ## COG0282 Acetate kinase 19 5 Op 5 . + CDS 18424 - 19374 441 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B + Term 19382 - 19415 2.2 + Prom 19416 - 19475 3.5 20 6 Op 1 . + CDS 19496 - 21997 1718 ## HMPREF0573_11202 hypothetical protein 21 6 Op 2 . + CDS 22015 - 23709 1515 ## COG0443 Molecular chaperone 22 6 Op 3 . + CDS 23718 - 25118 1070 ## + Term 25188 - 25217 0.5 + Prom 25281 - 25340 2.7 23 7 Op 1 1/0.095 + CDS 25363 - 28443 3508 ## COG0587 DNA polymerase III, alpha subunit 24 7 Op 2 1/0.095 + CDS 28462 - 28950 606 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 29215 - 29274 4.3 25 8 Op 1 14/0.000 + CDS 29378 - 29689 355 ## PROTEIN SUPPORTED gi|167755862|ref|ZP_02427989.1| hypothetical protein CLORAM_01379 26 8 Op 2 14/0.000 + CDS 29693 - 30007 338 ## COG2868 Predicted ribosomal protein 27 8 Op 3 14/0.000 + CDS 30010 - 30294 423 ## PROTEIN SUPPORTED gi|237734832|ref|ZP_04565313.1| 50S ribosomal protein L27 + Term 30303 - 30329 -0.6 28 8 Op 4 . + CDS 30364 - 31653 1616 ## COG0536 Predicted GTPase 29 9 Tu 1 . - CDS 31952 - 32380 602 ## Shel_21690 hypothetical protein - Prom 32523 - 32582 4.2 + Prom 32259 - 32318 4.8 30 10 Op 1 7/0.000 + CDS 32441 - 33514 706 ## COG0515 Serine/threonine protein kinase 31 10 Op 2 . + CDS 33578 - 34330 684 ## COG0515 Serine/threonine protein kinase 32 10 Op 3 . + CDS 34353 - 34943 772 ## SSA_0301 hypothetical protein + Term 34967 - 35002 3.3 + Prom 34991 - 35050 7.2 33 11 Tu 1 . + CDS 35071 - 35835 969 ## COG0708 Exonuclease III + Term 35919 - 35966 1.2 + Prom 35961 - 36020 11.8 34 12 Tu 1 . + CDS 36055 - 36639 464 ## gi|293400494|ref|ZP_06644639.1| hypothetical protein HMPREF0863_00778 + Term 36879 - 36903 -1.0 + Prom 36881 - 36940 3.0 35 13 Op 1 29/0.000 + CDS 37128 - 37709 847 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 36 13 Op 2 . + CDS 37713 - 38726 1307 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 38865 - 38898 1.2 - Term 38453 - 38496 2.4 37 14 Tu 1 . - CDS 38728 - 39081 471 ## gi|293400500|ref|ZP_06644645.1| conserved hypothetical protein - Prom 39192 - 39251 3.6 + Prom 38885 - 38944 4.9 38 15 Tu 1 . + CDS 39145 - 39807 828 ## COG2323 Predicted membrane protein + Term 39875 - 39915 -0.2 - Term 39681 - 39712 0.0 39 16 Tu 1 . - CDS 39804 - 41099 1213 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 41146 - 41205 8.4 + Prom 41170 - 41229 8.5 40 17 Op 1 . + CDS 41250 - 41540 268 ## gi|293400503|ref|ZP_06644648.1| conserved hypothetical protein 41 17 Op 2 3/0.048 + CDS 41537 - 43828 2825 ## COG0342 Preprotein translocase subunit SecD + Term 43831 - 43878 7.3 42 18 Op 1 7/0.000 + CDS 43921 - 45528 1760 ## COG0608 Single-stranded DNA-specific exonuclease 43 18 Op 2 9/0.000 + CDS 45590 - 46105 763 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 46116 - 46140 -1.0 44 18 Op 3 . + CDS 46152 - 48353 2571 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 45 18 Op 4 . + CDS 48394 - 48894 604 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 46 18 Op 5 . + CDS 48960 - 49328 120 ## SSA_2385 hypothetical protein 47 18 Op 6 . + CDS 49364 - 49792 210 ## Shel_18330 D-alanyl-D-alanine carboxypeptidase + Prom 50000 - 50059 3.2 48 19 Op 1 . + CDS 50126 - 50245 70 ## 49 19 Op 2 . + CDS 50242 - 50715 267 ## SmuNN2025_1348 putative acetyltransferase 50 19 Op 3 . + CDS 50790 - 51581 14 ## Amet_1430 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 51 19 Op 4 . + CDS 51668 - 52159 338 ## Cfla_0433 aminoglycoside-2''-adenylyltransferase + Term 52289 - 52321 -0.2 - Term 52269 - 52316 4.2 52 20 Op 1 . - CDS 52386 - 52964 399 ## COG1434 Uncharacterized conserved protein 53 20 Op 2 . - CDS 52961 - 54067 1071 ## COG1323 Predicted nucleotidyltransferase - Prom 54087 - 54146 3.3 + Prom 54000 - 54059 3.3 54 21 Tu 1 . + CDS 54227 - 55165 1086 ## COG2267 Lysophospholipase + Prom 55179 - 55238 7.5 55 22 Op 1 20/0.000 + CDS 55320 - 55829 364 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 56 22 Op 2 . + CDS 55845 - 56015 200 ## PROTEIN SUPPORTED gi|218290495|ref|ZP_03494615.1| ribosomal protein L32 + Term 56029 - 56080 6.9 + Prom 56039 - 56098 4.8 57 23 Op 1 32/0.000 + CDS 56159 - 56626 616 ## COG0779 Uncharacterized protein conserved in bacteria 58 23 Op 2 22/0.000 + CDS 56645 - 58345 2411 ## COG0195 Transcription elongation factor 59 23 Op 3 8/0.000 + CDS 58368 - 58625 190 ## PROTEIN SUPPORTED gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein 60 23 Op 4 10/0.000 + CDS 58622 - 58915 190 ## PROTEIN SUPPORTED gi|237734618|ref|ZP_04565099.1| 50S ribosomal protein L7 61 23 Op 5 32/0.000 + CDS 58924 - 60789 2542 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 62 23 Op 6 . + CDS 60805 - 61143 545 ## COG0858 Ribosome-binding factor A + Term 61146 - 61200 10.8 - Term 61418 - 61467 5.0 63 24 Op 1 19/0.000 - CDS 61540 - 62172 780 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 64 24 Op 2 . - CDS 62169 - 63245 813 ## COG4585 Signal transduction histidine kinase - Prom 63266 - 63325 4.5 + Prom 63167 - 63226 5.5 65 25 Op 1 . + CDS 63385 - 64338 357 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 66 25 Op 2 . + CDS 64351 - 65478 1140 ## FMG_0240 antibiotic ABC transporter permease protein 67 25 Op 3 . + CDS 65479 - 66681 1222 ## FMG_0241 putative ABC transporter + Term 66688 - 66729 6.2 - Term 66674 - 66717 5.4 68 26 Tu 1 . - CDS 66841 - 69204 2581 ## COG0474 Cation transport ATPase + Prom 69559 - 69618 6.6 69 27 Tu 1 . + CDS 69640 - 71193 2010 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 71227 - 71260 -0.3 70 28 Tu 1 . - CDS 71298 - 72236 893 ## gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 - Prom 72319 - 72378 7.9 + Prom 72737 - 72796 5.1 71 29 Tu 1 . + CDS 72892 - 73044 198 ## + Prom 73175 - 73234 5.9 72 30 Tu 1 . + CDS 73257 - 73532 192 ## 73 31 Op 1 . - CDS 73556 - 74008 557 ## BCAH187_A3483 hypothetical protein 74 31 Op 2 . - CDS 74005 - 74424 353 ## BAA_3543 hypothetical protein - Prom 74550 - 74609 1.8 + Prom 74435 - 74494 5.2 75 32 Op 1 . + CDS 74562 - 75233 568 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 76 32 Op 2 . + CDS 75230 - 76090 942 ## gi|293400720|ref|ZP_06644865.1| hypothetical protein HMPREF0863_01005 - Term 76244 - 76303 7.4 77 33 Tu 1 . - CDS 76364 - 76975 632 ## COG0344 Predicted membrane protein - Prom 76996 - 77055 7.5 + Prom 77025 - 77084 6.6 78 34 Op 1 24/0.000 + CDS 77199 - 79130 2525 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 79 34 Op 2 . + CDS 79127 - 81622 3010 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 81629 - 81674 8.6 - Term 81763 - 81824 11.2 80 35 Tu 1 . - CDS 81838 - 83097 1285 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog - Prom 83120 - 83179 2.5 + Prom 83067 - 83126 4.0 81 36 Op 1 . + CDS 83219 - 85009 1687 ## COG0249 Mismatch repair ATPase (MutS family) 82 36 Op 2 . + CDS 85006 - 87186 2366 ## COG0550 Topoisomerase IA 83 36 Op 3 . + CDS 87191 - 87610 580 ## COG0346 Lactoylglutathione lyase and related lyases + Term 87627 - 87666 3.5 + Prom 87712 - 87771 3.3 84 37 Tu 1 . + CDS 87905 - 88444 215 ## PROTEIN SUPPORTED gi|227377719|ref|ZP_03861180.1| acetyltransferase, ribosomal protein N-acetylase 85 38 Op 1 . - CDS 89121 - 89645 785 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 86 38 Op 2 . - CDS 89692 - 90402 840 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 90503 - 90562 2.8 + Prom 90344 - 90403 3.3 87 39 Op 1 . + CDS 90537 - 90977 635 ## BBR47_41040 stage V sporulation protein AC 88 39 Op 2 . + CDS 90979 - 91977 1111 ## BL00782 stage V sporulation protein AD 89 39 Op 3 . + CDS 91974 - 92327 480 ## RBAM_021510 SpoVAE2 90 39 Op 4 . + CDS 92327 - 93703 1574 ## Amet_3212 GerA spore germination protein + Term 93732 - 93788 3.0 91 40 Tu 1 . - CDS 94225 - 94506 135 ## + Prom 95151 - 95210 4.2 92 41 Op 1 21/0.000 + CDS 95260 - 95997 1036 ## COG1354 Uncharacterized conserved protein 93 41 Op 2 . + CDS 95990 - 96538 834 ## COG1386 Predicted transcriptional regulator containing the HTH domain + Term 96698 - 96752 2.9 + Prom 97152 - 97211 3.7 94 42 Op 1 2/0.095 + CDS 97296 - 98279 1249 ## COG1686 D-alanyl-D-alanine carboxypeptidase 95 42 Op 2 4/0.048 + CDS 98276 - 98848 651 ## COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. 96 42 Op 3 . + CDS 98841 - 99353 526 ## COG0700 Uncharacterized membrane protein 97 42 Op 4 . + CDS 99384 - 99713 584 ## 98 42 Op 5 . + CDS 99775 - 100512 928 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 100611 - 100655 4.5 + Prom 100630 - 100689 3.3 99 43 Op 1 . + CDS 100737 - 101495 638 ## COG1385 Uncharacterized protein conserved in bacteria 100 43 Op 2 . + CDS 101479 - 102264 929 ## gi|293400697|ref|ZP_06644842.1| hypothetical protein HMPREF0863_00982 101 43 Op 3 . + CDS 102269 - 103594 874 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 102 43 Op 4 . + CDS 103572 - 105032 1649 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase + Term 105072 - 105121 7.4 + Prom 105071 - 105130 7.7 103 44 Tu 1 . + CDS 105156 - 105335 241 ## PROTEIN SUPPORTED gi|167754628|ref|ZP_02426755.1| hypothetical protein CLORAM_00130 + Term 105338 - 105365 -0.8 + Prom 105472 - 105531 4.6 104 45 Op 1 . + CDS 105568 - 106464 311 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 105 45 Op 2 . + CDS 106457 - 107254 986 ## Cphy_1635 hypothetical protein + Prom 107447 - 107506 6.2 106 46 Op 1 . + CDS 107597 - 107797 356 ## 107 46 Op 2 . + CDS 107787 - 108713 1010 ## TTE0969 stage IV sporulation protein 108 46 Op 3 . + CDS 108729 - 109715 1084 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 109 46 Op 4 40/0.000 + CDS 109693 - 110373 890 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 110 46 Op 5 . + CDS 110360 - 111580 1413 ## COG0642 Signal transduction histidine kinase + Term 111655 - 111695 -0.1 111 47 Tu 1 . - CDS 111632 - 112012 232 ## Cphy_1803 transposase + TRNA 112263 - 112337 66.9 # Glu CTC 0 0 + Prom 112606 - 112665 6.6 112 48 Tu 1 . + CDS 112735 - 113223 450 ## - Term 113079 - 113123 -0.9 113 49 Tu 1 . - CDS 113283 - 113573 349 ## gi|293401464|ref|ZP_06645607.1| conserved hypothetical protein - Prom 113610 - 113669 7.9 - Term 113894 - 113952 4.1 114 50 Tu 1 . - CDS 113961 - 114548 601 ## - Prom 114679 - 114738 6.8 + Prom 114624 - 114683 3.8 115 51 Op 1 39/0.000 + CDS 114720 - 115670 988 ## COG0226 ABC-type phosphate transport system, periplasmic component + Term 115700 - 115735 7.4 116 51 Op 2 38/0.000 + CDS 115749 - 116690 1180 ## COG0573 ABC-type phosphate transport system, permease component 117 51 Op 3 41/0.000 + CDS 116687 - 117934 1362 ## COG0581 ABC-type phosphate transport system, permease component 118 51 Op 4 32/0.000 + CDS 117950 - 118711 313 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 119 51 Op 5 . + CDS 118724 - 119362 856 ## COG0704 Phosphate uptake regulator + Term 119577 - 119609 1.0 120 52 Tu 1 . - CDS 119606 - 121294 2011 ## COG1283 Na+/phosphate symporter - Prom 121333 - 121392 9.4 + Prom 121340 - 121399 7.5 121 53 Op 1 11/0.000 + CDS 121583 - 122050 430 ## COG0319 Predicted metal-dependent hydrolase 122 53 Op 2 3/0.048 + CDS 122019 - 122381 330 ## COG0818 Diacylglycerol kinase 123 53 Op 3 6/0.000 + CDS 122378 - 122788 555 ## COG0295 Cytidine deaminase 124 53 Op 4 16/0.000 + CDS 122785 - 123684 957 ## COG1159 GTPase 125 53 Op 5 1/0.095 + CDS 123684 - 124424 769 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Term 124520 - 124574 7.1 + Prom 124674 - 124733 9.3 126 54 Op 1 3/0.048 + CDS 124867 - 126249 1444 ## COG0423 Glycyl-tRNA synthetase (class II) 127 54 Op 2 31/0.000 + CDS 126270 - 128036 1824 ## COG0358 DNA primase (bacterial type) 128 54 Op 3 5/0.000 + CDS 128041 - 129237 1642 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 129 54 Op 4 . + CDS 129237 - 129899 415 ## COG2384 Predicted SAM-dependent methyltransferase + Prom 129961 - 130020 4.1 130 55 Tu 1 . + CDS 130040 - 130552 534 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 130672 - 130720 7.4 131 56 Tu 1 . - CDS 130751 - 131662 393 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P - Prom 131774 - 131833 6.0 + Prom 131777 - 131836 6.9 132 57 Op 1 4/0.048 + CDS 131863 - 133227 1697 ## COG0513 Superfamily II DNA and RNA helicases 133 57 Op 2 . + CDS 133224 - 134105 1207 ## COG0648 Endonuclease IV 134 57 Op 3 . + CDS 134107 - 134637 381 ## Tlet_1813 GCN5-related N-acetyltransferase + Term 134840 - 134892 7.1 - Term 134828 - 134878 2.1 135 58 Tu 1 . - CDS 134944 - 136008 1215 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis - Prom 136144 - 136203 6.4 + Prom 136064 - 136123 4.4 136 59 Op 1 . + CDS 136151 - 138223 1935 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 137 59 Op 2 . + CDS 138277 - 138426 221 ## PROTEIN SUPPORTED gi|237734635|ref|ZP_04565116.1| 50S ribosomal protein L33 + Term 138427 - 138460 1.3 138 59 Op 3 . + CDS 138465 - 139076 670 ## COG0491 Zn-dependent hydrolases, including glyoxylases 139 59 Op 4 . + CDS 139079 - 139543 435 ## CLJ_B0675 acetyltransferase, GNAT family + Term 139552 - 139595 4.1 + Prom 139547 - 139606 6.0 140 60 Op 1 . + CDS 139659 - 140654 1079 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 141 60 Op 2 . + CDS 140644 - 141597 993 ## Hhal_0325 type II secretion system protein 142 60 Op 3 . + CDS 141620 - 141919 435 ## COG4537 Competence protein ComGC 143 60 Op 4 . + CDS 141933 - 142292 277 ## gi|218282301|ref|ZP_03488597.1| hypothetical protein EUBIFOR_01179 144 60 Op 5 . + CDS 142282 - 142446 173 ## 145 60 Op 6 . + CDS 142415 - 142828 498 ## gi|160915088|ref|ZP_02077301.1| hypothetical protein EUBDOL_01096 146 60 Op 7 . + CDS 142773 - 143258 410 ## 147 60 Op 8 . + CDS 143275 - 143604 616 ## + Prom 143606 - 143665 10.4 148 61 Tu 1 . + CDS 143701 - 144264 667 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 144268 - 144294 -1.0 + Prom 144308 - 144367 6.0 149 62 Op 1 . + CDS 144387 - 145361 1023 ## gi|293400645|ref|ZP_06644790.1| hypothetical protein HMPREF0863_00930 150 62 Op 2 7/0.000 + CDS 145364 - 146020 258 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 151 62 Op 3 5/0.000 + CDS 146056 - 147366 1614 ## COG1160 Predicted GTPases 152 62 Op 4 . + CDS 147372 - 148370 1147 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 148371 - 148401 2.0 + Prom 148381 - 148440 6.5 153 63 Tu 1 . + CDS 148546 - 150138 2002 ## COG4108 Peptide chain release factor RF-3 + Term 150175 - 150221 2.5 154 64 Op 1 . + CDS 150296 - 150478 290 ## gi|293400640|ref|ZP_06644785.1| putative assimilatory nitrate reductase electron transfer subunit + Prom 150489 - 150548 4.3 155 64 Op 2 . + CDS 150572 - 152050 1824 ## BPUM_2011 spore cortex-coat assembly protein + Prom 152090 - 152149 4.8 156 65 Tu 1 . + CDS 152170 - 152454 367 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 152467 - 152508 -0.7 + Prom 152539 - 152598 10.2 157 66 Tu 1 . + CDS 152627 - 153331 907 ## COG2738 Predicted Zn-dependent protease + Term 153499 - 153535 0.0 + Prom 153501 - 153560 6.5 158 67 Op 1 . + CDS 153609 - 154811 806 ## gi|166032501|ref|ZP_02235330.1| hypothetical protein DORFOR_02216 159 67 Op 2 . + CDS 154898 - 155203 327 ## Mhun_0153 hypothetical protein + Term 155447 - 155493 -0.9 - Term 155252 - 155301 1.0 160 68 Op 1 . - CDS 155340 - 155741 323 ## 161 68 Op 2 . - CDS 155752 - 156192 420 ## Elen_0703 response regulator receiver protein - Prom 156407 - 156466 4.6 162 69 Op 1 . - CDS 156483 - 156842 509 ## 163 69 Op 2 . - CDS 156847 - 157167 402 ## gi|224543709|ref|ZP_03684248.1| hypothetical protein CATMIT_02922 - Prom 157379 - 157438 13.3 - Term 157451 - 157504 8.6 164 70 Op 1 10/0.000 - CDS 157508 - 158248 817 ## COG3442 Predicted glutamine amidotransferase 165 70 Op 2 . - CDS 158250 - 159584 1193 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 159681 - 159740 5.0 + Prom 159773 - 159832 6.5 166 71 Op 1 4/0.048 + CDS 159905 - 160612 905 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 167 71 Op 2 . + CDS 160651 - 162081 1757 ## COG0015 Adenylosuccinate lyase + Term 162105 - 162161 8.4 - Term 162093 - 162149 8.4 168 72 Tu 1 . - CDS 162184 - 163785 1828 ## COG0504 CTP synthase (UTP-ammonia lyase) 169 73 Op 1 . - CDS 163887 - 164459 628 ## Cthe_0203 response regulator receiver/ANTAR domain-containing protein 170 73 Op 2 . - CDS 164476 - 165732 1231 ## COG0174 Glutamine synthetase - Prom 165763 - 165822 2.0 - Term 165773 - 165824 5.1 171 74 Tu 1 . - CDS 165879 - 167180 1641 ## COG0104 Adenylosuccinate synthase - Prom 167234 - 167293 6.3 172 75 Tu 1 . - CDS 167447 - 168283 1030 ## COG0489 ATPases involved in chromosome partitioning - Prom 168314 - 168373 6.3 173 76 Op 1 . - CDS 168596 - 169519 1010 ## COG4974 Site-specific recombinase XerD 174 76 Op 2 . - CDS 169516 - 170178 571 ## COG4123 Predicted O-methyltransferase 175 76 Op 3 . - CDS 170216 - 170839 833 ## BMQ_4400 stage II sporulation protein M - Prom 170869 - 170928 5.2 - Term 170860 - 170888 -1.0 176 77 Op 1 . - CDS 170934 - 172115 1407 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 177 77 Op 2 2/0.095 - CDS 172168 - 173001 1071 ## COG0784 FOG: CheY-like receiver - Prom 173022 - 173081 4.0 178 78 Op 1 3/0.048 - CDS 173186 - 174187 857 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 179 78 Op 2 . - CDS 174239 - 175900 1979 ## COG0497 ATPase involved in DNA repair 180 78 Op 3 6/0.000 - CDS 175905 - 176684 795 ## COG1189 Predicted rRNA methylase 181 78 Op 4 13/0.000 - CDS 176681 - 178558 2231 ## COG1154 Deoxyxylulose-5-phosphate synthase 182 78 Op 5 . - CDS 178572 - 179414 1049 ## COG0142 Geranylgeranyl pyrophosphate synthase 183 78 Op 6 . - CDS 179407 - 179619 413 ## gi|160915117|ref|ZP_02077330.1| hypothetical protein EUBDOL_01125 184 78 Op 7 1/0.095 - CDS 179619 - 180947 1621 ## COG1570 Exonuclease VII, large subunit 185 78 Op 8 . - CDS 180944 - 181321 518 ## COG0781 Transcription termination factor 186 78 Op 9 . - CDS 181397 - 182299 1142 ## Cphy_1981 5'-nucleotidase (EC:3.1.3.5) 187 78 Op 10 . - CDS 182350 - 182679 406 ## gi|293400613|ref|ZP_06644758.1| hypothetical protein HMPREF0863_00898 188 78 Op 11 . - CDS 182719 - 183276 724 ## gi|293400612|ref|ZP_06644757.1| putative stage III sporulation protein AH 189 78 Op 12 . - CDS 183338 - 184714 1941 ## CTC00421 hypothetical protein 190 78 Op 13 12/0.000 - CDS 184705 - 185649 438 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 191 78 Op 14 . - CDS 185658 - 186488 861 ## COG0130 Pseudouridine synthase - Prom 186560 - 186619 6.0 + Prom 186519 - 186578 4.8 192 79 Tu 1 . + CDS 186599 - 187552 648 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 187659 - 187695 -0.3 - Term 187538 - 187579 6.6 193 80 Tu 1 . - CDS 187758 - 188336 672 ## COG3481 Predicted HD-superfamily hydrolase - Prom 188356 - 188415 7.7 + Prom 188884 - 188943 5.8 194 81 Op 1 5/0.000 + CDS 189053 - 189847 980 ## COG1273 Uncharacterized conserved protein 195 81 Op 2 . + CDS 189847 - 190779 825 ## COG1793 ATP-dependent DNA ligase + Prom 190799 - 190858 2.8 196 82 Op 1 45/0.000 + CDS 191099 - 192022 769 ## COG1131 ABC-type multidrug transport system, ATPase component 197 82 Op 2 1/0.095 + CDS 192019 - 192921 902 ## COG0842 ABC-type multidrug transport system, permease component 198 82 Op 3 . + CDS 192933 - 193373 461 ## COG3279 Response regulator of the LytR/AlgR family 199 82 Op 4 . + CDS 193385 - 193813 413 ## gi|296442869|ref|ZP_06884927.1| hypothetical protein CloleDRAFT_3013 + Term 193840 - 193873 -1.0 - Term 194024 - 194083 9.0 200 83 Op 1 13/0.000 - CDS 194217 - 195962 2375 ## COG0173 Aspartyl-tRNA synthetase 201 83 Op 2 . - CDS 195975 - 197312 1852 ## COG0124 Histidyl-tRNA synthetase - Term 197626 - 197659 3.3 202 84 Tu 1 . - CDS 197667 - 198404 899 ## COG0217 Uncharacterized conserved protein - Prom 198427 - 198486 10.4 Predicted protein(s) >gi|312957683|gb|AENW01000003.1| GENE 1 135 - 2930 3031 931 aa, chain + ## HITS:1 COG:SP1383 KEGG:ns NR:ns ## COG: SP1383 COG0013 # Protein_GI_number: 15901237 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 57 930 1 872 872 863 50.0 0 MVKNGSCFGVLRVSGVKRVSECACGILYMGELGWYRVYYTFLDSGAFFYAYKEDANMKQL TGSQIRQMFLDYFKSQGHMIEPGASLVPHNDPTLLWINAGVAALKKYFDGSEKPKNNRIA NAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKEEAISFAWEFLTSPKWIGFPKEK LYVSVYTDDADAYRIWTEVCKVDPSHILKTDDNFWEIGEGPGGPDSEIFYDRGEAYDPEG LGERLFFEELENDRYIEVWNVVFSQFDCKPELDRKDYKELPQKNIDTGMGLERLVALVQG GETNFDTDLFLPIIHATEAYTDARYADAQHKMAFRVIADHIRTVSFALADGALFSNEGRG YVLRRVLRRAVRFAKKLNIQGAFMYKLVPVVYDIMKDFYPYMEEKLDYIARLVKAEEERF HATLADGERLLLQVMEEKKESRVIDGKTAFKLYDTYGFPLELTVEIAEESGYTVDKDGFD AEMQQQRERARAARGDAESMGSQSIDLMEFTQESSFIGYDVRHTSAKVIALFQDGVKVDA ISDEGDVVFDTTVFYAESGGQVGDSGTICAEGVQAVVDTTIKAPHKQHLSHVIIKEGELR VGDAVELQVDEKKRDIITSNHSCTHLLQSALKQIVGSHIQQAGSFVSEEYLRFDFTHFEK VNEEQLKEIERLVNRYIGGHYAVSKVEMPIEEAKKSGATALFDEKYGDVVRVVSMGDVSK EFCGGCHVNNTQEIGVCKIISEESIGSGIRRITAKTGYDAYAEFAKEDDTLHAVASDLKL KGISKVEEKVASVLEENVQLKKELAALQASMFALKASDLVNHMQELNGRQVLIERMDGAD AKAMKDIVSNIRSQRENCVVFLASVHGDKVTFVAGADKAAVSGGIKCGDLVREAALVCDG KGGGRPDMAQSGGKDASKVEEALHLIKNMLS >gi|312957683|gb|AENW01000003.1| GENE 2 2992 - 3249 310 85 aa, chain + ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 6 82 6 82 89 75 50.0 2e-14 MRDITETMSFKSDDLKRDNIKHVLRLVKEALDERGYNSVNQLAGYLISNDPAYISSHNNA RTIIQSVERYEIIEELVRAYLEEDK >gi|312957683|gb|AENW01000003.1| GENE 3 3249 - 3662 550 137 aa, chain + ## HITS:1 COG:BS_yrrK KEGG:ns NR:ns ## COG: BS_yrrK COG0816 # Protein_GI_number: 16079793 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Bacillus subtilis # 1 135 1 136 138 143 57.0 8e-35 MRILGLDLGSKTLGVSVSDALGMIARPVETIRFESDDYEAACKQVQPYIKEFQVKTAVLG LPKHMNGDVGIRGEISLMFKEKLEALGLEVVLWDERLTTVAAEKILISADVSRKKRKKII DQMAAVQILQSYLDSKH >gi|312957683|gb|AENW01000003.1| GENE 4 3699 - 3959 390 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915321|ref|ZP_02077534.1| ## NR: gi|160915321|ref|ZP_02077534.1| hypothetical protein EUBDOL_01330 [Eubacterium dolichum DSM 3991] # 1 86 1 86 86 94 80.0 2e-18 MLDSSSLYVTDENGNEKRMEILFTFEDDNHAKKYVVFMDPEEEEGEVFASAYDDEGNLIP VESDAEWQMIEEVIGAFQEDEEAVEE >gi|312957683|gb|AENW01000003.1| GENE 5 3937 - 5007 1218 356 aa, chain + ## HITS:1 COG:SPy0348 KEGG:ns NR:ns ## COG: SPy0348 COG1559 # Protein_GI_number: 15674503 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Streptococcus pyogenes M1 GAS # 8 352 156 518 524 183 33.0 4e-46 MKKQLKNKKVLIALIGVCIVLAAALSVFIYYKTGLKAVSSRETPTSFQVQPGETSEAVLD KLQTQELIRNKTVAKLYMKFHGLSDIKAGNFKLDARWDTPKILETLNDSKQANADDIKIT FKEGMWAKDVAALIEKQTGVKAGELLALWNDDAYLNTLIKKYSFLSRDILNAQYKVKLEG YLYPETYSFHKDATAKQITETFLDQFQKAIAPYEADIKKSGMSMQEAITFASIVQYEAST KEDMEMIVGVFQNRLKQGMTLDSSVTVCYALYDDMTSGEDCEVNTHIDSPYNTYKNAGLP IGPILNPGAMAIQAVLHPKANDYLYFVADIYGDGKVYYARTLDEQEANIDKYNLRK >gi|312957683|gb|AENW01000003.1| GENE 6 5017 - 5649 793 210 aa, chain + ## HITS:1 COG:BH1275 KEGG:ns NR:ns ## COG: BH1275 COG0572 # Protein_GI_number: 15613838 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Bacillus halodurans # 2 210 3 210 211 245 59.0 5e-65 MKKTILIGIAGGSASGKTSISAQLKEHYEDTNSVVIIRQDDYYKDQSEKTMEERVKTNYD HPFAFDNELLVAQLQRLLQRQPICKPTYDFVHHTRSEVIEEIEPSDVVVIEGLFVLENED LRNLCDIKIFVDTDADIRFIRRLLRDVNERGRTLESVVEQYTSTVRDMHNLFIEPSKRYA DVIIPEGGHNVVAIDLLITKISSIISENVV >gi|312957683|gb|AENW01000003.1| GENE 7 5675 - 6154 756 159 aa, chain + ## HITS:1 COG:MG282 KEGG:ns NR:ns ## COG: MG282 COG0782 # Protein_GI_number: 12045138 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycoplasma genitalium # 1 158 1 158 161 124 47.0 8e-29 MADEKFLVTKEGLDELLKEQDNLIHVVRDEVIRELQEARAQGDLSENADYDAARDRQARV EARIRDLEAMIANAEIISEDKKAATKKTVSLGSTVTILDMSTNEEETYNIVGSIEADPLN GKLSNITPLATSLMDHKIGDVVEIETAEEPYQVKVIDLK >gi|312957683|gb|AENW01000003.1| GENE 8 6239 - 6703 647 154 aa, chain + ## HITS:1 COG:BS_comEA KEGG:ns NR:ns ## COG: BS_comEA COG1555 # Protein_GI_number: 16079613 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus subtilis # 29 154 60 204 205 88 40.0 4e-18 MKKVLIVCCLLLLFYGRYEPVNLTTTQRKTKQIEVKGEVKHPGVYTVDIHADAEEVLKKA GGLKKGADVSGINQTQDLSDHSVLVVGKQQEQKKISINSATEKELQTLTGIGPSMAQRII AYRSQQPFQTIEDIMKVKGIKEKLFAKIKEQITL >gi|312957683|gb|AENW01000003.1| GENE 9 6700 - 8667 1843 655 aa, chain + ## HITS:1 COG:BS_comEC_2 KEGG:ns NR:ns ## COG: BS_comEC_2 COG2333 # Protein_GI_number: 16079611 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus subtilis # 401 640 16 295 307 152 34.0 2e-36 MKNSWLLCGWCCLLLLWAHWISIWFSLALMLGLLWYYRSHYRIHPLFVLLLLLLQGRMLL LLREPETPMDTVLQIREIKAGYAIAHTQGQDVMVYGLKHANFNDIVQVKGTYAPVTSLHN FHRFYFPDWLKRRGIRYQIQAQSYQLLQEGSGVRHTLYAHVQGIADRKQRSWLNMLLYGI HEEDVSYFLTSSGLHIATLAACLQKLLLMICSQANASVIALLLLGLCGHVTVFSSSLIRI LLFRLVTLCCHSRNPQDRLGISMAAVLLLFPYMAWELAFLLPLGFRMLALFNVRKRSRRL TGLLLLIPMQFLFFQSCNPLQLLLFPVFRYVYAFLYAGCLLSVPCSFGALFAFTTRLADL LDALQQCGITLYYTPQLLWLFLWGKGAVCYISYAQKKPLAVLCLLFLYAPFSSWFDPFGE VLMIDVGQGDCTLITLPFHQGAVMIDIMGSRYRNIPKEVVVPIVKAKGYQRLDALILTHD DFDHSGGKEELLKELNVTRIIDHKDKAEPIKGLPLVFLLRDYKGKDSNDNSIVTYMQTDQ LKALFMGDAGTEAEAALLQRYDLAVDVLKVGHHGSDTSSSLSFLHELQPQLALVSAGRNN RYHHPSTAIMQRLRQENIPALVSARDGAVSIRFSRYFSYYVSAEGAIGILHGLWE >gi|312957683|gb|AENW01000003.1| GENE 10 8807 - 9766 1238 319 aa, chain + ## HITS:1 COG:BS_yqeN KEGG:ns NR:ns ## COG: BS_yqeN COG1466 # Protein_GI_number: 16079610 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Bacillus subtilis # 3 303 18 325 347 163 34.0 5e-40 MNYVLYGEEQYLLQESLTRIVRSHVPDANDLNKLVYDADTTDLDVILEDAMTIPFFSDCK IILVYHANFLSAANEHAVDTAALERYLDDPLESTVLVLIGDFEKLDARKKIVKKVQKTCK VLQYRKLDEQGKQSYVQEQVKKRSLQIEPSAMQALLRRLPLDIRTIQTEMEKLELYGGVI SSDVVERLVTRPLEEDVFQLVNAVVDRDLRKSFHMWQDLCVLNKDAIYLIALLAAQFRFL YEVKALMLHGKGKDAIKDELKAHPYRVQLAMKTAQRLGIGYLMHILEQLATLDQNMKAGR LDKKLGFEMFLLGIQGVRQ >gi|312957683|gb|AENW01000003.1| GENE 11 9763 - 10965 1329 400 aa, chain + ## HITS:1 COG:FN1106 KEGG:ns NR:ns ## COG: FN1106 COG1760 # Protein_GI_number: 19704441 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Fusobacterium nucleatum # 1 395 1 397 408 338 46.0 1e-92 MKSLKELYRIGPGPSSSHTLGPQRAASLFKERYPNAHHYEVELFGSLALTGKGHLTDYII IETMKPKECVVLFKNRRELKHPNTMQLSAYDEADRLLGEWTVYSIGGGAIQIEGEKSKEG ADVYPHHLMKDIEAYCETHSMTLWEYVNHFDPLDDYMDTILQQMMATVDGGLAREGVLPG DLKLKRIAKELKQKADTAKSAAEREKLLLCAYAYSASEENASGSMTVTAPTLGSSGILPA LVCYYHRILGVSREQLRNGLKVAGLFGNLIKENATISGAQGGCQAEIGAAVAMGAAMVSY LRGQTMRQIEYAAEIGIEHHLGLTCDPVGGYVMIPCIERNAVGVLRAMDAAVLAEGISDL REHKVSFDMVVNTMNYTGRKIPIELRETSLGGLARVVPLK >gi|312957683|gb|AENW01000003.1| GENE 12 10985 - 11485 579 166 aa, chain + ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 161 1 162 169 90 33.0 1e-18 MKGLIVYSSLSGNTKKIAEAIAEVAEDSELISVREFQSSMLANFDLFYIGYWVDKGDCDA ATLRLLAQLKDKRIVLFGTLGAAEQTEYYDRVKQQVESHAAHCHILGHFLCQGAVGEAVI ARYQSMLAEHPQDEHIKQQLANYENGKSHPDEQDLANARAFAKSIG >gi|312957683|gb|AENW01000003.1| GENE 13 11454 - 11753 236 99 aa, chain + ## HITS:1 COG:BH0048 KEGG:ns NR:ns ## COG: BH0048 COG2827 # Protein_GI_number: 15612611 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Bacillus halodurans # 19 92 4 77 94 71 51.0 4e-13 MPELLRNPLAEIPYTKGFYVYILRCQDDSLYTGWTTHLRHRFHQHAIGKGARYTRARRPL ELYYFECHADKQAAMRREYQIKQLSRSEKLKLKYRSEDV >gi|312957683|gb|AENW01000003.1| GENE 14 12064 - 12717 689 217 aa, chain - ## HITS:1 COG:FN1885 KEGG:ns NR:ns ## COG: FN1885 COG1272 # Protein_GI_number: 19705190 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Fusobacterium nucleatum # 6 217 1 212 215 207 52.0 8e-54 MEEKSMRDMFRLGFGEEVANCVTHGIMAFLCICSLPAAAVYSYNKSGSELAAGVSVFILC LFLMFLVSTLYHCMPFGTTHKYVFRKLDHICIYFAIAGSYTPIALTLIGGWQGYLILAIE WSAVLGGVLLKAISSKSYPKLSMAIYMIMGWTAIFFLPTLLSKASPLFLVLIVGGGVMYT IGAFFYGKPQKKYFHSVWHVCINLASILHFIAIVFVM >gi|312957683|gb|AENW01000003.1| GENE 15 13004 - 15934 3800 976 aa, chain + ## HITS:1 COG:MYPU_7140 KEGG:ns NR:ns ## COG: MYPU_7140 COG1196 # Protein_GI_number: 15829185 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Mycoplasma pulmonis # 1 976 1 979 979 585 36.0 1e-166 MFLKRIELQGFKSFADKSIITFDSDVIGIVGPNGCGKSNINDAIRWVLGEQSVKSLRGNN MSDVIFSGSTARKAVNMAEVTLVFDNSRHIMNVEFEEVEVTRRLHRTSGEGEYFINKAPC RLKDIVNLVMDTGLGRDSLSIISQGNISAFADAKPEDRRALFEEAAGVAKYKKRKNESLS KLNRTQDNLSRLEDIIMELERQVNPLKRQAKKAEVYLEKKKQLEVIEVSVLVDEIEKLSE QIDMLKKKAFDLDSQKAMHETTIQVEDVKNSELRNEMYQLDREVNKLQEQYAKLSEESRM LETRKIEMDEKRKYALEFASNAEKAKELKAMMEEAHYEYEDRSKRLKNLETDIALQKEAA ARLEHDVSYCTQENAQATSILNRLENRRAVLENLAKQPFNHQQAVKSVLDAGLNGILGVV SQLFKPLMNYETAISNALGGALYHIVTVDEEAARHAITFLKKNQSGRATFLPLPVMKPRY MQKEHRMLAENSVGFLGVASEFVENDTQFDTLRDALFGNVVITDNLIHANAIAKLLRFQY KIVTLEGDIVNRGGSMTGGKGRNNSTPLTIQKELNQVLQSLEGQQMKVEGLKNQLYALQA KKEQNSANLVQMQISSAQLDPIVKAKWAKYDRLKSDYEQIAPKEDLDKAELLEDDIVVKL SNVHSRIDEVSSSMKSKRERRMKAGSEVERKDAQIRQLRRDLNILQNEQREVEVAQAKAE TKLETTLERLSSTYEMTFEYAQSQKAEIDIVEARKQVVILRQEISSLGNVNLDAPQEYKE VSERFEFLSRQRDDLMAAKDKILEAIDEMDDIMVKQFQEMFDKINAQLNDVFRALFGGGK ARLFMVDPEDVLNTGIDIDVQPPGKTVQNIRLFSGGEKSLIAICVLFSILKARTMPLCIF DEVEAALDQANVERFAKYIAQFRGESQFIVVTHRPGTMAQCDALYGVTMQQNGVSQLLKV KLQDAINMIDKEEVKA >gi|312957683|gb|AENW01000003.1| GENE 16 15934 - 16905 772 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 1 321 1 325 336 301 49 1e-80 MGIFSKLKQTFSSKKDGDRYLSGLDKSKKSFSERIRKLALGFTGVNEEFLEDLMVVLLEA DIGIKTAQKIVDEVESRAMDQKLKSFDEISECLIEVMHELYASVEDEDFHKNEDGPTVIL MVGVNGSGKTTTTAKLTKLFQSEGSSVVLAAADTFRAGAIDQLAKWADRLGVTCIKGREG GDPSAALVDACRYAKEHGMDYLIGDTAGRLQNKANLMQELSKMRRVIEREIPGAPHEVWL VLDATTGQNGISQAQIFLETTKVSGIILTKMDGTAKGGIVIAIRDLLGLPVKYIGLGEKE DDLRPFDIDSYLYGLCEDILQHD >gi|312957683|gb|AENW01000003.1| GENE 17 16898 - 17212 349 104 aa, chain + ## HITS:1 COG:SA1079 KEGG:ns NR:ns ## COG: SA1079 COG2739 # Protein_GI_number: 15926819 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 7 104 11 110 110 74 49.0 4e-14 MIDQMERMNALLDAYEQLLTEKQREILNLYYKEDLSFSEIAENLHISRAAVNDHIKRSTH ILAEYEKKLHLVQNYETRSRIYDKMKTVGNDAIRKLVEQLENLE >gi|312957683|gb|AENW01000003.1| GENE 18 17228 - 18421 1373 397 aa, chain + ## HITS:1 COG:BS_ackA KEGG:ns NR:ns ## COG: BS_ackA COG0282 # Protein_GI_number: 16079999 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Bacillus subtilis # 1 395 1 393 395 457 57.0 1e-128 MSKIISVNAGSSSLKFQLFEMPSEEVLTSGIVEKIGFEDAIFTIKVNGEKIKKVLPIPDH TKAVSMLLEALVEYKIVNSLDEITGAGHRAVHGGEIFKESVPVTEDVVEKFASLNDLAPL HNPAGLVGYNAFKNNLPNCKHVFVFDTAFHSTMPKESYIYALPMKYYDEYKIRRYGFHGT SHKYVSLRCAELMNKKVEDTKIITCHLGNGASITAVDGGKSINTSMGFTPLAGVMMGTRC GDIDPAIVTYIMKKTGATPDEMDDIMNMQSGMLGVSGISSDARDIEDGCKEGNPAALLTA EVYVNRVINVVGGYYAQLGGADAIVFTGGIGENDTNMRKMICDRLSVAFGIQLDEELNGK TRGKEVLLSTAESKVAVWLIPTNEELMIARDTYRLIA >gi|312957683|gb|AENW01000003.1| GENE 19 18424 - 19374 441 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 6 310 7 305 311 174 33 3e-42 MNTDILFELVEQYDIITIYRHVSPDADALGAQFGLKQWIQETYPQKQVYALGRDAGSKQS LFPQMDVVPDETVAASLAIILDTANGARVDDDRWSKAARTLKIDHHIVVESFADVEVVED LFGATCEMLAYMFEQKQLRLSATCAQYLYGGIIADTLRFSIATIKPRTLRTAAYLLEMGV DVKKANEDHFSTSYRLYRFENYIRSNVSLLEGHVAYMIINREDYERFQLTFNEAKEKVFV LGGVDEFEAWALFTEKERDENGRRIYNGSLRSKNRTINDIANRYQGGGHRFACGVKGLYE ETIQELLQELCERVNE >gi|312957683|gb|AENW01000003.1| GENE 20 19496 - 21997 1718 833 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0573_11202 NR:ns ## KEGG: HMPREF0573_11202 # Name: not_defined # Def: hypothetical protein # Organism: M.curtisii # Pathway: not_defined # 346 473 27 154 176 92 38.0 6e-17 MDTIFSYELRREQPLSTEEKQRIRVILNAYRIPEEQLSSWNGDSCSLPLFRCFEVPLLYS EHIRIADSETAYTAAAHWCCMLDALQEALSGVVISAVMQEAVVHDAEHGFLIPSMDREAF LRCKRQERVEAALDSPQSEEPVLFTEQAPLYATRLYLKPLLQQKIEQQVAAFEARLQILL PACYRDFLIRYNGGAATDTYFYMENAGETVYCLDRFYGFHEGDTGFPAMSRCLWFTELLE QGYLCIAGDAFGNHIVLRIRENGYGGVFFYAHDNIPRFHALSSDFFHFMMQVQSHIDVLQ PSSALTQVYICRLEDDSQDARVQKRPLDVFLEGEMAADKAERVQQLMEEAEPRIEGFLHF DTFAFRLAVIEELMYVQKLLPSFELYDKLYELHVDPEGDFRYHGPLLYALRYFKELRIPV ALAEHVESLTLDGGNEIYGQIMLEWDGEYSLFDIADVKERELKQFGNLKQVAVNGLAEPA FVRSLRMQGIRVTDRFDEQDYACEKLQHLLTNWETCCVYAERSDAAAQLLAALRYCMGGY YKELFHPSLQHWEQLHEPGVAKDTLSELAKQLQTLGLTLMRYEPGIEGCCLLVTRNITAC IALLKKDARYTLVQHCGVWSIKETNQPTLTRTQSDTDPGGSQRQEEDGQICRPQPEMRKQ MSRMQKRVLFAVCAAVLGGIALFIINSILVSNQEMIWDENLNYDYQVVCKGNVGDCQLRS SDGVLYFTQPFQESEPTYSSLLAVREYNNRNYDRIYDVTQRKFLHGDFLHVRVVELKEDG EPMEYRGLLATKDKKNYMLYSEKHKNGIRVKPDTYGSVGYGPFDVDTGVEWND >gi|312957683|gb|AENW01000003.1| GENE 21 22015 - 23709 1515 564 aa, chain + ## HITS:1 COG:RSp0521 KEGG:ns NR:ns ## COG: RSp0521 COG0443 # Protein_GI_number: 17548742 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Ralstonia solanacearum # 3 560 24 591 593 381 37.0 1e-105 MSILGIDLGTTNSLACVWKGKEAILIPNAFGSYLTPSVVSFLENGEVLVGEGAKQRLHTH PSLTFAEFKRCMGTDTVYTVHGKTYYPQDLSAMVIRKLVENASVFLNERIEEAIISVPAY FNDDQRWATKIAGQLAGIRVERIINEPSAAALSQHIQQTEEDMLALVVDFGGGTLDISIV EAFDNIVEIRAISGDNHLGGSDFDEAIMDCFLEENGLQRKELLPQELALLKTGVERAKML LSVRKEYSLQLFLHQKNCCMELNRGKMTAICMPLLQRMQKPLERVLKDSEISLQELQKVI LVGGSCRMPAVIQYLEFLLKRDVELVHEPDQAIAIGCGTAGGIKERCSDIRDVLLSDICP FTLGLAVYDDGARDYVMEPIIERNTALPCSVNRMFSYRSTSGELQTSILQGEHRKAAANL VVRTVRIKVPKTSEEYQPISVRFTYDINGLLEVETNTFHEESASRVVIQNRMNRMSEEEV HQRLRELQAYKLPSQEKEVYRHLLERGERMYSESIGEKRMRIAALLEELEAALQQEQPQH IREVFRRVKSALDEWEADAVSFFS >gi|312957683|gb|AENW01000003.1| GENE 22 23718 - 25118 1070 466 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELEQIKGLLDLVNLEDITAIKKAYAKQVKLHHPEEEPQAFQLLQTAYREAVQYAQAQRA GHAIKVNVLQEKAEESNDESFEAVSAGSVSSCEGLVQAAPKTTDERIEELLQALQSGNTL AVKKQLQTAQRLALLQDTAFLTALSEGLQNQVNLLSYAMRQTLIRAFHLDAGQLQPAQQE LLSSIRQGIPDFQSYRHSCKRDTAYLLDTWRALCQSREEDSEAWLEFLNHKHWTKDTVDE LTAEKILALEMKKCYAHSSAVAGKIYSFLHIRDHLAQDPAQTYAKLKELLSKDASFTQQN FISWRNHVQKQALQFFELSHEDKGAEVWEEWLHKQSLDKADLYLLERLSYYAKRHHYKKE VRNLLFSYFELETADTPAKQSLRKAILEEPPAYRRKKQMLLLLALLAALSAVLIPALLGR AQEQRKAEDRKQEELRNIQQEMLEESQRKSQEQLEALQKKIEAGNQ >gi|312957683|gb|AENW01000003.1| GENE 23 25363 - 28443 3508 1026 aa, chain + ## HITS:1 COG:BS_dnaE KEGG:ns NR:ns ## COG: BS_dnaE COG0587 # Protein_GI_number: 16079975 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Bacillus subtilis # 3 1007 4 1012 1115 804 43.0 0 MSVHLHVRSCYTLLQSTLTIPKIVAAAKRCGYTAVALTDKHVMHGAMAFYHACKKENIKP IFGMEVDVLEQEELYGFVVLAKNDAGYQNLLKLSTWLNTGEERRIPDLDTLAYYAKDCIV LTNGDQNQMETLIVKEELDLLRHWLKLCRKQFSDFYVSIARNDSGLMEKKNPVLKQVCKE LDIPYTALSRIYFEREEDEESYKTLCAIDQGVSLHDKMLNYSPRRYFRTPQEMQLLYEDE ELQMSDRIAALCQVEMQLPKAVLPKFQNKYGVSSEEFLRSLCQKGLQKRMQYQPISSVYQ QRLDYELDVIIRMQYADYFLIVWDFIRFAKTQHIYIGPGRGSAAGSLVAYCLGITHVDPI RYHLLFERFLNPERISMPDIDTDFPDNRRDEVIHYVEQLYGKHRVSHIITFNTLAAKQVL RDVGKAMEINPRQIDRLCKLVPNVIKVTLDYAYQNDARFKELINSGETMRRLYATARKLE GLPRHASLHAAGIVFSDEAIEQVCPLIDVDEGICATQFTMEYLEELGLIKMDFLGLRNLT IIDEIVQHINATADKKLDIMRIPLDDAKTYALIRAVDTVGVFQLESEGMKNLIRKMQPNC FEDIVATIALFRPGPMENIPEYLDRREHPEKVDYIHPSLQPILQNTYGIMIYQEQIMQVA QTMAGFTLGKADNLRKAISKKKGEELRRMQAEFISGALRKGYDEALAQKVYALIMKFANY GFNRSHSVAYGMIAYQLAYLKANAPLYFFNSLLNSVIGSETKTSEYVFEARKRNIQILLP DVNRSHNQYGIEDNALRFPFVGIKGIGSAVSSLIVEERDKKGEFRDFFDFTARMNGNKIG KKTIEILIYAGALDCFKVGRASLMASLEDALRYADLVKIEDVDQVLFDFDLVSKPAMTMM RDNATIRSEKEKEAIGFYLSRHPIADVRSRMGKDLPILISLPKYKGRYVKFVCLVDRCRQ YRTKNGDMMMFVIGSDETGKFDLVCMPNIYRQHADDLVKGNYLYVEGIVDKETSCLVKKL TRIEKE >gi|312957683|gb|AENW01000003.1| GENE 24 28462 - 28950 606 162 aa, chain + ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 2 161 3 162 162 175 49.0 3e-44 MVTIDTVEEADIAELAQLEACCFPKEEAADEAALRRRAKAFPESFLVMKKDGVIIGMING CVSNQHMICDAMYEDESLHDPYGAYQTVFGLDVHPAHQHQGYAGELMQALIETAKKERRK GMVLTCKKHLVGFYEQFGYRNMGVSASVHGGAEWYDMLLCFA >gi|312957683|gb|AENW01000003.1| GENE 25 29378 - 29689 355 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167755862|ref|ZP_02427989.1| hypothetical protein CLORAM_01379 [Clostridium ramosum DSM 1402] # 1 101 1 100 114 141 67 3e-32 MYAIIETGGKQIRVEEGSTIFVEKLDVQEGEAVVFDKVVAYCNRSLRVGTPYVKGVKVNA KVEKQGKAKKIIVYKYKAKKGSSHRKQGHRQPYTKLTIESIEA >gi|312957683|gb|AENW01000003.1| GENE 26 29693 - 30007 338 104 aa, chain + ## HITS:1 COG:lin1576 KEGG:ns NR:ns ## COG: lin1576 COG2868 # Protein_GI_number: 16800644 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted ribosomal protein # Organism: Listeria innocua # 1 102 1 105 105 63 39.0 7e-11 MVRVHVKRHQGIIQEVEIRDHAGYADAGQDLVCAGVSSIAVGMMNALDEMVPEACDFVLK EAYIKIETILPDATAGILLQGMYYQLSTMQESYADYITINDQEV >gi|312957683|gb|AENW01000003.1| GENE 27 30010 - 30294 423 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237734832|ref|ZP_04565313.1| 50S ribosomal protein L27 [Mollicutes bacterium D7] # 1 94 1 94 94 167 85 3e-40 MKFVLDIQLFASKKGVGSTKNGRDSESKRLGAKLADGQFCHAGSIIYRQRGTKIHPGTNV GKGGDDTLFAKVNGVVKYERLGKDKKKVSVYPQA >gi|312957683|gb|AENW01000003.1| GENE 28 30364 - 31653 1616 429 aa, chain + ## HITS:1 COG:lin1572 KEGG:ns NR:ns ## COG: lin1572 COG0536 # Protein_GI_number: 16800640 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Listeria innocua # 1 429 1 429 429 476 59.0 1e-134 MFIDRVKVHVKAGKGGDGIVAFRREKYVAYGGPSGGDGGAGGDVVFMVDEGKTTLLDLRY NRKMAAEPGGNGKTKKMHGADGADCIIKVPQGTLVKDEKTGRILADLTRKGQKEIIAKGG KGGRGNFHFKSSKNTAPQYSELGAPGEERDIMVELKVLADVGLVGFPSVGKSTLLSVVSK AKPEIAEYHFTTLAPNLGMVQVPDGRSFVMADLPGLIEGASEGKGLGHQFLRHIERCRVI IHVVDMGANDGRDPVADYKTINDELKQYEYRLMERPQIVLANKMDLDGAQENLKRFRKAY PEVEVFETTTIIAEGLEPVLYRAADLLETTPQFPLYNDDASDEEAEGVLYKFEPEQPAFE VHNMGNGNWELSGEELERSFKMSKMDNEEDFMRFARKMRKMGIDEALRKAGCKDGDVVTI CDIQFEFVE >gi|312957683|gb|AENW01000003.1| GENE 29 31952 - 32380 602 142 aa, chain - ## HITS:1 COG:no KEGG:Shel_21690 NR:ns ## KEGG: Shel_21690 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 35 130 40 135 144 90 47.0 1e-17 MQKQKTKDLEDILKKAGALEKDRILKEIRDVSFVDYINEILLEKDLEKSDIIRDAQIPRT YAYQIFQGSKQAGRDKILQLAIAMKLNLEETNRLLTVAHHNHLYAKQQRDAILIFGISKQ YSLIQINELLDEFHHELLGDFS >gi|312957683|gb|AENW01000003.1| GENE 30 32441 - 33514 706 357 aa, chain + ## HITS:1 COG:CAC0404_1 KEGG:ns NR:ns ## COG: CAC0404_1 COG0515 # Protein_GI_number: 15893695 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Clostridium acetobutylicum # 19 225 42 272 306 136 34.0 6e-32 MRLDLLEDICTLSETEEKTVQLVKNCLDQKFYIKKIMRDCAELQIYRQLMQHPHPGIPML YEATRRGETCILVEEFINGTTLEYVLSERSLDDAAIHHIMQQLLSAVEHLHSLQPPVIHR DIKPGNIMVLEHLEIRLIDFEIARVFKQDKNRDTRVMGSAGYASPEQYGFHQSDCRSDIY AIGAVLKTMVQKDVTAKDIHSPFQHIIETCMQLDPDKRYQSVGELQKALGYCEEKSLPHA SVSVLLSQLPGIRRDSAAKRLLFLAYYGLCIILGASMTVTPPPSPYSLICQRIAFGLCLA IIPAITVNAGNVRELLPLQDHGRASIRFFKGSILWFLCAFIIISLLVILAAILESLL >gi|312957683|gb|AENW01000003.1| GENE 31 33578 - 34330 684 250 aa, chain + ## HITS:1 COG:BH2504_1 KEGG:ns NR:ns ## COG: BH2504_1 COG0515 # Protein_GI_number: 15615067 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Bacillus halodurans # 47 225 60 266 343 85 33.0 8e-17 MRLEVYDDVAMLFHSDEKDILLVQHMIENLFFVKKVVRAKLDFSLYQLLQSHPYEHLANV IDFSYSHEKTILIEEFVNGCTLEYKLSQRRLPVEECIGIMLQLFAVVGHLHAQTPPIIHR DIKPDNILIDKGHVVLIDFEIAKLMTTRKDVQRSGSVGYAAPEQYYGLSDQQSDIYSMGI LLKELCAHTAWRNNEADIFLTIIRKSTAKRQEERYLTISQMQNDFIITCRSCSSTAKYAE SIPMQKEQKV >gi|312957683|gb|AENW01000003.1| GENE 32 34353 - 34943 772 196 aa, chain + ## HITS:1 COG:no KEGG:SSA_0301 NR:ns ## KEGG: SSA_0301 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 65 196 60 191 191 128 51.0 1e-28 MRKLEGPMKKLKKWQIVLIVILALGVIGALAGRGDEEKKNGEPAAEKTDNKKKEDKKKEP KEKTYGIKDTLKVGDVEYTVNGIETTDTIGDEYLNQKAQETYLIVSVTVKNNGDDALSVL DSFFKLKKGDKTYNTDSTAIMYLGDESIFAKEINPDASLKGKIVFDVTKATIDDKNLQLQ VQTGAWGTEKGLINLH >gi|312957683|gb|AENW01000003.1| GENE 33 35071 - 35835 969 254 aa, chain + ## HITS:1 COG:FN0047 KEGG:ns NR:ns ## COG: FN0047 COG0708 # Protein_GI_number: 19703399 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Fusobacterium nucleatum # 1 251 1 253 253 380 70.0 1e-105 MRLVSWNVNGIRACMQKGFMDFFKEIDADVFCIQETKMQPGQLEIETPGYYQYMNSAEKK GYSGTMVFSKQKPLSVTYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYRM VWEDAFRAYLHKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGKMSVLLES GFIDSFRYLYPKQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARIHTDIYGS DHCPVSLEFDKKAV >gi|312957683|gb|AENW01000003.1| GENE 34 36055 - 36639 464 194 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400494|ref|ZP_06644639.1| ## NR: gi|293400494|ref|ZP_06644639.1| hypothetical protein HMPREF0863_00778 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 191 4 200 202 92 31.0 1e-17 MDFSNKLYVYVDAAALQDPQAEHFMEVLAKQYRQIILFVENVWEEETLKQLPAYGYICRT VYGPDLQSVLEKDRARRSPDKTKHILFITRSAQTLHGISVLCLGRMGLEQILLEKLQNEK KRRTVVAGICMGCVVYFAVYFIMLDKLPLWMRDGGIAFLLCLLPAELLILTLLYGLCKRV IPFDTIFEFFDMFG >gi|312957683|gb|AENW01000003.1| GENE 35 37128 - 37709 847 193 aa, chain + ## HITS:1 COG:BS_ruvA KEGG:ns NR:ns ## COG: BS_ruvA COG0632 # Protein_GI_number: 16079826 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Bacillus subtilis # 1 189 1 201 201 149 42.0 4e-36 MIAFIKGIIHSYSNDSLIIENNGIGYRVYVANPMAVRLNAEVILYTYQHVREDAITLFGF TTMEEHDLFLQLISVKGVGPKTALGMLGVCPARNMIAAIESNDVKTLKGLPGIGAKTASQ IVLDLKGKLVEEVTELEVKENEQLLDALEALKALGYKNAELNSIKKELGTLEAMTSDQYI RKGLGILAKRKGV >gi|312957683|gb|AENW01000003.1| GENE 36 37713 - 38726 1307 337 aa, chain + ## HITS:1 COG:BS_ruvBm KEGG:ns NR:ns ## COG: BS_ruvBm COG2255 # Protein_GI_number: 16081161 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Bacillus subtilis # 2 324 5 328 336 426 65.0 1e-119 MERILSNESQSMDEEASLRPQSLREYIGQRQLKENLSVFIEAAKQRNEALDHVLLYGPPG LGKTTLSYILANEMGGSIKTTSGPSIEKGGDLAAILSTLEPGDVLFIDEIHRLPKQVEEI LYPAMEDYCIDIVVGKDSATTRSIRLELPPFTLVGATTRAGDLTAPLRDRFGIVSQLEFY ELAELQQIISRTSRVMDTEIEEEAVLEIALRSRGTPRIANRLFRRVRDFATVMNDGIISK QIAEMALDKLKVDHLGLDNVDHKYLKGIIERFKGGPVGLEALSSSIGEETMTLEDVYEPY LLQIGFINRTPRGRVVTEKAYRHLGYDLREGLFLHTD >gi|312957683|gb|AENW01000003.1| GENE 37 38728 - 39081 471 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400500|ref|ZP_06644645.1| ## NR: gi|293400500|ref|ZP_06644645.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 115 1 115 118 90 60.0 3e-17 MKFKLQTYVRSVAVLLALTLLFSLVFAALYYFHAVSTSTFHILNWIGGIIAYGAGGALLG IGVNKKALFHALPVAAAFYLLSLLLSGFSLPALLENLSKALVYIAAAVIAFSRTHKG >gi|312957683|gb|AENW01000003.1| GENE 38 39145 - 39807 828 220 aa, chain + ## HITS:1 COG:BH1232 KEGG:ns NR:ns ## COG: BH1232 COG2323 # Protein_GI_number: 15613795 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 3 209 2 212 218 153 37.0 2e-37 MQEYINLMVKCFIVYFVIIFALRIMGKREVGELSVFDIVIYLVMSELLAISITDTHESIL KSLVPIFTLAFLQIVISWVLLKSKKTRDIFDGKNAILIHNGHINQSIMKRERYNIDDLMS QIRSKDLCTPDEVAFAVLENNGQLSILPKNKCKVKHPDPLISDGTINKKALQDLSRDEEW LKNALKSEGVESVDDVFLCIYQNNGMFVIKKEMNSKDTFF >gi|312957683|gb|AENW01000003.1| GENE 39 39804 - 41099 1213 431 aa, chain - ## HITS:1 COG:BH1233 KEGG:ns NR:ns ## COG: BH1233 COG2244 # Protein_GI_number: 15613796 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Bacillus halodurans # 2 420 3 432 522 187 32.0 2e-47 MKKTVLQSTVILVIVSVIAKALSFIVRIMLARTLSPSAMNYYTLAAPTMVFFITLAQMGI PGALSKVIAQSDHPHQPLKVSVILSLLNNAVIILTFLLVLPFLATRILKQKEILPVLYAI IPLIPLVSLSGILKGYLFGLQHHVQATSSQLFEEGSRILFLFVVFYLHPFTDAITMARIA MLSVSVGEACSALFMLISLRRQKRTLSRIPRLFSDLNRRQFDEVLTVSIPMTGSRLIGSL TYFMEPIVMVLELGTAASAAMVGAYGQLNGYVLPIITMPSFITVTLSNFLLPSFTYSYSR GYYDHARRLFSMIIGCCFLVGLGCSVICYLFPEQLLYLFYHNTHGALLLKQLAIPFALYS LQPPLSSMLHALSLSKQTVADTLSGSLVRILCVLFLTRTCMEASLPIALTAGMLITTTMH AVRLFIAFKNN >gi|312957683|gb|AENW01000003.1| GENE 40 41250 - 41540 268 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400503|ref|ZP_06644648.1| ## NR: gi|293400503|ref|ZP_06644648.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 96 1 96 96 125 67.0 1e-27 MSGQSEIEDKYIKLAIALKTNQLKREELSSLTYQHVESSLKEHWRFRKPGSIHEAVEDIQ QLSASDVVAYLSTQAVIMGSRMNLNDFDDLFGGDKQ >gi|312957683|gb|AENW01000003.1| GENE 41 41537 - 43828 2825 763 aa, chain + ## HITS:1 COG:BS_secDF_1 KEGG:ns NR:ns ## COG: BS_secDF_1 COG0342 # Protein_GI_number: 16081162 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Bacillus subtilis # 1 434 1 436 446 421 49.0 1e-117 MKKSRLVVFVITVLTILTLIVTCTPSVRKNMKLGLDLQGGFEILYEVSPLEGKKLPSMTA VAKSVEKRVDVLGVNEPEITVEGDNRIRVQLAGVKNADQARRVISSTANLTFRDVNDNLL MDSTVLQEGGASVMYDNYGKPIVSLKLSDQKKFYEVTQKVSQMGSGSNLMVAWLDFNPDT DSYAKEKDQKNPKFISAATVSEGINSTSAQISGSFTKEEATELKDLINSGSLPVKMSEKY SNAVTADYGINAFSETMLAGGIGIALIMLFMILYYRLPGLISAVTLATYVFIVFLIYNAM GAVFTLSGIAALVLGVGMAADSNILTFERIKDALYSGRSVKTAFYEGSSKSFITIFDAQV TTFICALILYMMGTGSVKGFATMLIVSTISTIILIVFVTKFLLSLLVGSGWLNDKLSWFG VKKAHVPDVSKGQERFYFGFFKNFDFVKNAKYFIIASVTVLVIGVGCMAFQGMKGNGILN WGIDFTSGTKLTVQSDTAISRDKLNDQLKSLGINASSIKINGEKDNVANIFVKDAIDEHK MDTVKAGLKKTYQHDVNDNVVTPVIGQELVRSAILISILAWIGVLIYISIRFKWDYAISG IVGLIHDVFFVLAACAIFRLEVNTEIIAVLLTVIGYSINNSIVVFDRIRDEMKGRKLATT TKAEYREIVNEALQRTATRSILSTLTTILPVVCLLFFGSSAIRIFCLALFIGIACGAGSS LFVAAQLWYQIRIHQNPKKHVKKKHKKKKDELEEMIIPGMNDY >gi|312957683|gb|AENW01000003.1| GENE 42 43921 - 45528 1760 535 aa, chain + ## HITS:1 COG:BS_yrvE_1 KEGG:ns NR:ns ## COG: BS_yrvE_1 COG0608 # Protein_GI_number: 16079816 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Bacillus subtilis # 2 534 9 560 560 270 32.0 4e-72 MQIHKLQSERSQQIQEMHHVSALCAKVLASRGLKDEQIAELLQKPQLADPFTANGMQEVA TRIYQAKQNKERVMVCGDYDADGICSTAILVDALRRYGIQAGFYIPNRFAEGYGLQKHTV ELAHEKGYSLLITVDNGVKALDALTEARNRGVDVIVTDHHAMDEEFPCLYLLHPFLMGER FETLSGAGVALEISRALLGEVKEHVVLACVAAIADVMPLRQETRAIVQLGLQYLRQGICQ PIQLLANDRYPKWDETLIAFQIVPKLNTTGRLADIANANNTVRYLLSTNLEQLQHMAKQI RKLNDRRKTMSDDMVKVARTLVRPEYRFQLLFHDSFHEGMAGLVAGKLSEELQLPVMVAA QREQMFKGSIRSLDLLDLTTFFDACRPSLSAYGGHKAAAGIGFPYENKQIVQDYVNTRME GIHFQQEKSYDVIPIRVQEATLAEVESLSVLGPFGCGFEEPLFYLEEASVQGCRLLGNRE HAKWILSDSLEAMYFRCGNAYERLHEKNNVNFIGNLRINSFMGRKKVNIFVTEAY >gi|312957683|gb|AENW01000003.1| GENE 43 45590 - 46105 763 171 aa, chain + ## HITS:1 COG:FN1483 KEGG:ns NR:ns ## COG: FN1483 COG0503 # Protein_GI_number: 19704815 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 1 170 1 170 170 239 64.0 1e-63 MNFKDYIASIPDFPQEGVLFRDITPLMADGKAFKEACDKVIDFARSVKADVIVGPESRGF IFGCPVAYELGIGFVPVRKPGKLPRETVSVSYDLEYGSNELHVHRDGIKKGQRVLIVDDL LATGGTVDATIQIVQELGGEVAGCAFLIELAGLKGREHLKDFNVFSLMSYE >gi|312957683|gb|AENW01000003.1| GENE 44 46152 - 48353 2571 733 aa, chain + ## HITS:1 COG:BH1242 KEGG:ns NR:ns ## COG: BH1242 COG0317 # Protein_GI_number: 15613805 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Bacillus halodurans # 5 732 3 727 728 643 46.0 0 MVSKNVVTFDEMMVEVRKYIKKEENIDLITRAYLCAEKNHTGQYRKSGEPYIIHAIQVGY ILTMLRTGPKTIAAGFLHDVVEDCDVTIQEMSDMFGEEVASLVESVTKIGALKFKDEKEY LASNHRKIFIAMAKDVRVILIKLADRLHNMRTLQYMRPEKQKKIASETLEVYAPIAHRLG ISDIKNELEDLCFQYLNKEKYYEIAKLVEKRKTERDEQVQRMIADISSLLDAHHIGYRIF GRSKHLYSIYKKMMTKNKRFEEILDLLAIRIITDTDTACYETLGYIHAKYRPIPGRFKDY IAMPKVNMYQSLHTTIVAEDGNIFEVQIRTEAMDAVAEQGIAAHWRYKENINGGREVHQK EIEEQLHWFKDFSVMSDEVNDDAMEYMNLLQKDIFEANVYVMTPKGKVIALPNGSTPIDF AYRVHTEVGHHTVGATINGVLMPLNTKLKTGDVVNIRTSKQSPGPSEDWIKVVKSAHARN KIRSFFQKQESERRSMDIKKGEELLVEELKRRNLDADTYTEQKKLESIAGSLSFNSYQDL MYAIGVKQVSLPSVIDRLVKHKTSVPLDNEELAKMFNRQERKKKPSATGIRIAGIESMKI SLAACCAPVPGDEIIGYITKGAGVKVHRADCPNIINEKQRLIPVEWDENIEQKTYEVKLI VKSTDRNFLLSDIVTVVSQCKAGLQHVDSTVEEDRISATTKMTVVVENSEHLRSLMANLQ KVNSVKSVERVIQ >gi|312957683|gb|AENW01000003.1| GENE 45 48394 - 48894 604 166 aa, chain + ## HITS:1 COG:DR0188 KEGG:ns NR:ns ## COG: DR0188 COG0454 # Protein_GI_number: 15805224 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Deinococcus radiodurans # 10 142 10 142 175 59 26.0 2e-09 MLHIRQAREADKPAIEAMYGRRVRYNDAHGIHQWNPDEVSWEAFSKLYSIADYYVGTVNE KVVCGLFIVDEDALYWPDMEKGTSLYLHKICVDPAYSGNGYADAMIQYFIEKGRREGYPD VRLDVREHKDKLRRMYERNGFQLYKTGRFHPDFTTALYIYPFEKAV >gi|312957683|gb|AENW01000003.1| GENE 46 48960 - 49328 120 122 aa, chain + ## HITS:1 COG:no KEGG:SSA_2385 NR:ns ## KEGG: SSA_2385 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 122 1 122 124 124 59.0 1e-27 MIAIIGASTFSVVIILSVLLICGLPLGELTMGGRYKVFPKKLRIVLVLQLVLQMFFVIII LQMGGIVPLWFSRNITKIICVIMAAYLSLNTVMNCISKSKKEKVVMTPLSLISAICFWAT AL >gi|312957683|gb|AENW01000003.1| GENE 47 49364 - 49792 210 142 aa, chain + ## HITS:1 COG:no KEGG:Shel_18330 NR:ns ## KEGG: Shel_18330 # Name: not_defined # Def: D-alanyl-D-alanine carboxypeptidase # Organism: S.heliotrinireducens # Pathway: not_defined # 22 142 234 356 357 72 32.0 3e-12 MKKVIEMVVCCMLIVTLVGCKNAVTTNVKIDYGTSAIYTKEDMDSAIDTIKETFKSFEGC ELYTLSYSSDDVCRDEENIAWMNDLERANDNKQIFTQCIMFDSSFRSPKKGGGAWEPNEE YTWSWWLARSEGGEWKLMTYGY >gi|312957683|gb|AENW01000003.1| GENE 48 50126 - 50245 70 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEKDWCDEQGNVYPLLNMKLIDEFSEEVRKTGIHKEVKK >gi|312957683|gb|AENW01000003.1| GENE 49 50242 - 50715 267 157 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_1348 NR:ns ## KEGG: SmuNN2025_1348 # Name: not_defined # Def: putative acetyltransferase # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 157 1 158 166 185 55.0 5e-46 MKYTIRELSSNEYKILEDFLYEAIFIPEGVDSPSRDIIKQPELQLYISEFGKEDDNAFVA EIDGKVVGAVWTRIMNDYGHIDDRTPSFAISLYKEYRGLGIGTEMMRQMLVVLQEKGYRK ASLAVQQANYAVRMYQQVGFEIVDKNEEEYIMVCNLK >gi|312957683|gb|AENW01000003.1| GENE 50 50790 - 51581 14 263 aa, chain + ## HITS:1 COG:no KEGG:Amet_1430 NR:ns ## KEGG: Amet_1430 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 3 248 7 255 271 166 38.0 8e-40 MNILILYYSGVGNTKMVATKIFHELQGSHEATLVSIEDLSTDITIADYDSLVIGFPTIHA APAYPILTFIKQMEQLENSIPAFLFTTCGLYSANTLRIFAKLCEKKNMITILSRSYRCAA TDGILLAPAMRIWSRHEKRLDKKVENDVSVFIRRCNDPVVADIPRFKIYSILNYPNKFFG QRFSPPIYTHKQHCVLCGKCRIHCPVQCICKDDEGYPLFDNEKCIHCYRCIHHCPKKALS LTKKRPLLKTLNDGWNWSSGDRK >gi|312957683|gb|AENW01000003.1| GENE 51 51668 - 52159 338 163 aa, chain + ## HITS:1 COG:no KEGG:Cfla_0433 NR:ns ## KEGG: Cfla_0433 # Name: not_defined # Def: aminoglycoside-2''-adenylyltransferase # Organism: C.flavigena # Pathway: not_defined # 8 151 2 143 157 118 39.0 6e-26 MSRKEVTTKEDIMTVIDILENAEITYWIDGGWGVDILAGKQTRDHRDIDINFDSRYTEKL LHILFEYGYEIDTDWKPVRMELYSEKYGYLDIHPFVLHEDGTAKQASLEGDWYQFDKDLF GSSVFEGRTIPCISVKGQKLFHSGYELRDKDRHDILILERMTE >gi|312957683|gb|AENW01000003.1| GENE 52 52386 - 52964 399 192 aa, chain - ## HITS:1 COG:CAC0352 KEGG:ns NR:ns ## COG: CAC0352 COG1434 # Protein_GI_number: 15893643 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 15 179 29 193 225 96 31.0 3e-20 MTGLLTLVLLVVAANLILYHYFPTPPKPQSDRVYDVAIVLGSPAEEDGSLSRVQKTRMDA AITLYKEKRVRCILISGGSVRNTYTEADIMAAYAIRCSIPSTALLLERQAKNTYENLLYA KTLCDAHAWKHVIVVTSCFHVRRASYMVRKFFDDYVMQKTAEKEKCRHYITEYFHMWNSL RCEVMLYRKRKR >gi|312957683|gb|AENW01000003.1| GENE 53 52961 - 54067 1071 368 aa, chain - ## HITS:1 COG:BS_ylbM KEGG:ns NR:ns ## COG: BS_ylbM COG1323 # Protein_GI_number: 16078570 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Bacillus subtilis # 1 351 1 387 415 200 34.0 3e-51 MRSCGIVTEYNPFHNGHRYHIEQARRVSGCDALLAVMSGNFVQRGECAIVDKWTRAKAAI QAGCDLVIELPYPYVVQRSDIFARQAVALLRLAGIDTLVFGSETTDMQQLHRLADTSYEH YQKQRKNGISMAKTLEMVHGRVASNDILGMAYLRALKDSAIQPIAIQRTNGYHDEDILHA ISSATAIRRAVKEKKPVSHTTPMAEDLQEGVFMEDYYPYLQTLLLSTPAEELKKRFLVDE GMEHMLQGNARKHMDYGSFLQACITQRYPRSSIQRSLTHILTHTDKQEIDSLPPCTFLRI LAFNDTGRAYLRELKQKEIAIASAFHQIPKEHREIFLRTTAAYAFAFPLSKRKEVMDSEL RSPMYITS >gi|312957683|gb|AENW01000003.1| GENE 54 54227 - 55165 1086 312 aa, chain + ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 30 304 26 299 306 151 34.0 2e-36 MTTTLQEYSFISDADALEISVLRCTPTGRPRAIIQLVHGMAEHKERYMDFMQYLGELGYL CVLHDHRGHGKSIRREDDLGYMGTTKAAALIEDIRQLNAQLHREYPSLKIYMFGHSMGSL AVRAYLKRYDDTIDALIVCGSPSKNPAAGAGKLLCKLMKCMKGAHYRSPLIQKMAFGNHC DGFAEEGSDNVWLCSDMEVVRAYDRDPLCGYTFTLNGFENLFSLMQDVYERKNWTLRNRT LPIRFIAGSEDPCIIRRGKFQEAAGLLREVGYSDVSARLFDGMRHEILNEPDHLLVYEDV SAFLLKVEEKNT >gi|312957683|gb|AENW01000003.1| GENE 55 55320 - 55829 364 169 aa, chain + ## HITS:1 COG:BH2584 KEGG:ns NR:ns ## COG: BH2584 COG1399 # Protein_GI_number: 15615147 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Bacillus halodurans # 1 165 1 165 169 85 33.0 4e-17 MKWSRMELLQAKDATIEFDEMIRFEPEVFSKMHQIRGLQDVTVSGNVHYEASSERVFADL DIEGVMIVPCSITLEDVEYDFHTKSLEVFSFEKTDDEDVHEVKGDVVELLPVIFQLIVME VPLKIVKEGLTQYPKGDGWEVVKEEDYIKEKSKEIDPRLAKLKEFKLED >gi|312957683|gb|AENW01000003.1| GENE 56 55845 - 56015 200 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|218290495|ref|ZP_03494615.1| ribosomal protein L32 [Alicyclobacillus acidocaldarius LAA1] # 1 54 1 55 58 81 67 2e-14 MAVQQRRNSKTRKAKRRTHYKLAAPTLVKCPACGEYKVPHKMCSCGEYNGKTIVEK >gi|312957683|gb|AENW01000003.1| GENE 57 56159 - 56626 616 155 aa, chain + ## HITS:1 COG:lin1358 KEGG:ns NR:ns ## COG: lin1358 COG0779 # Protein_GI_number: 16800426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 4 154 5 154 155 100 38.0 8e-22 MDQIQKLKELITLLVAEDGIELYDVAWHTEGSMRILQVSIMHKDGSMDIDTCAAQSEKIS TMLDEMDMIASEYFLEVCSPGAERELKSEEQIRDAIGEFVYVKLKNPRAGMDEIKGTLTA FENNTVYLDYMAKAVKKKAEIEMDNIALIRLSVKI >gi|312957683|gb|AENW01000003.1| GENE 58 56645 - 58345 2411 566 aa, chain + ## HITS:1 COG:lin1359 KEGG:ns NR:ns ## COG: lin1359 COG0195 # Protein_GI_number: 16800427 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Listeria innocua # 5 351 4 348 372 291 48.0 2e-78 MKLKDFMAAMQAIETDRKLSKEVVVDALQEALAKAFRKHIEIPDALVRVDVNEKSGDIKV YQQRLIVENVEDDELEISLEDAKRVNQELELGGVVEEEVSIADLGRAAVILAKNVMKQKI REAEKLVVYEEYCDKVEEMVMGTIESVEEKFCVVNIGKTLALMPKNQQIPNERYREGEMI RVVITEVNKETKGAQVLVSRGDATLVKRLFEKEVPEIFQGIIEIKAIAREAGERTKMAVY SHNENIDPIGACIGPRGQRVQVIIDELGGEKIDIFEWSEDVTELIKNALSPAEVLAVIPS EERKGGLLVVVPDNQLSLAIGKRGKNARLAVKLTGNKIDIKAETDVDAAGINWKEIAMKQ REEFLARQQEAKLAAQMERFEENAQPQDALSLDDAGVSFQEAVTEEAVSEPVVEESSEPV EATASPAVEEATVSAPVEEVVEEAQPQEETDLEKAARIAREKQKQEGLNLKEKQEYRSKF ETLADASAKQDDKAAAKPRYKKYDKYEEKEERRKPTFDLNKKDYEMKPIYSEEELAEIER EEREIEESDWIHDEIDFDEYDKYYEE >gi|312957683|gb|AENW01000003.1| GENE 59 58368 - 58625 190 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein [Dictyoglomus thermophilum H-6-12] # 2 85 5 88 98 77 45 3e-13 MKKIPMRKCVATDESLPKKELIRIVRTPEGTIEIDETGKRNGRGAYLKRSVEALEAAMKR KSLVRSLECEIPEEIYVKLKEMFSK >gi|312957683|gb|AENW01000003.1| GENE 60 58622 - 58915 190 97 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237734618|ref|ZP_04565099.1| 50S ribosomal protein L7 [Mollicutes bacterium D7] # 1 89 1 90 98 77 46 3e-13 MKDVTGILGLAARARKTATGEIVYTQLRARHVHLLILAEDIGDNAKKKLNDKCSFYKVPC VYMDGALMNMAIGDRNRKAIAILDKGFAEKIAACLKG >gi|312957683|gb|AENW01000003.1| GENE 61 58924 - 60789 2542 621 aa, chain + ## HITS:1 COG:BH2413 KEGG:ns NR:ns ## COG: BH2413 COG0532 # Protein_GI_number: 15614976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Bacillus halodurans # 38 619 149 728 730 683 62.0 0 MARQQHRRGNNNRKGNNNNRSRNTNTNFTPKKERVEVKEITYNGPLSVGELAEKLNRNAS EVIKLLFMMGTMVTINSTLDDETIELVCMEWNVDVHKEIIIEESDFEEQMEEAEDEALLE NRPPVVTIMGHVDHGKTTLLDTIRKTHVTEGEFGGITQHIGAYQVNVKGKRVTFLDTPGH EAFTAMRARGAKVTDLVIIVVAADDGVMPQTKEAVDHAKAAGVPVIVAVNKIDKAGANRE RIVSEMSELGLMPEEWGGDTIYADISAKFGTGVSDLLETILVVSEVYNFRANPNKLATGT VIEAKLDKGRGPVTTLLVQGGTLHTGDAVVVGTAFGKVRKMTDDHGREIKKALPSTPVEI IGLNDVPIAGDIFKAFDHEKKARQIAETRLNNKIASERNATGAAMSLDDLARQIEEGEVQ EVNLIIKADVQGSAEAVRASMEKIDVQGVRVNVIRSQAGAITESDILLASASHAVIYGFN VRPNALVRKKAEEEGIEIRLHNIIYKALEEMENAMKGMLAPVYEEVVIGQAEVRQIYKVS KVGTIAGCMVTDGCLRKECGVRLIREGVVIYTGKLGSLKRFQNDAKEVTSGYECGLTIEN FNDIKVDDVIEAYEDQQVEPE >gi|312957683|gb|AENW01000003.1| GENE 62 60805 - 61143 545 112 aa, chain + ## HITS:1 COG:SA1113 KEGG:ns NR:ns ## COG: SA1113 COG0858 # Protein_GI_number: 15926853 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Staphylococcus aureus N315 # 2 112 3 113 116 104 46.0 5e-23 MTLKAEKIAGIIQKEISEIIQFSLKDPKIGFITITDVTVTNDLSIAKIYVSFLGQKPREE AGMKALDRSRGYLRSELAKRMTIRKVPELIFKLDDSLERGNKIERIISEINK >gi|312957683|gb|AENW01000003.1| GENE 63 61540 - 62172 780 210 aa, chain - ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 204 1 207 208 176 48.0 4e-44 MRILIVDDDKLVCSSLKTILEAQGQTIAGIGCSGREALQLYRETNPDVLLMDIRMEGMNG VDASEAILHSFPDARILFLTTFSDDDYIIRALKLGVKGYILKQNFDSIIPALEAVYMGQN VFNTEIIAKLPDLLKQHTKETLCSYDLNERELHFIQLVAKGLNNKELAQTLFLSEGTVRN YLSSLLEKLQLRDRTQLAIFYYQNLQSKET >gi|312957683|gb|AENW01000003.1| GENE 64 62169 - 63245 813 358 aa, chain - ## HITS:1 COG:CAC0239 KEGG:ns NR:ns ## COG: CAC0239 COG4585 # Protein_GI_number: 15893531 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 31 353 35 354 368 101 24.0 2e-21 MKQLINYLLFLCIGCCFSFFYDHQLYRLLALLSAVILASISYLYTRRTWTPYAMILFALL ATLQQSFLYYLPLLLYCIRRQHFSYTILLYLLPILFHLRMENLYLCSAIAIFSIFAISLR QQWEENEEIKLSFMRQRDATKELADILSNKNRHLLVQQEQEIRIAILDERNRIAREIHDH VGHLLSSALLQIGAIQAIQKEDKLKEPLQNLRDTLSQGMDNVRSSVHDLHDDALDLQVTL QRLLKDYSFCDGTLEYDVLHPLSQQTIYHILAIVKESMNNTMKHSNATKYSITVREQPAF YQLILRDNGTRHSSVPWQTRGIGLSNMQERVADMHGYLNITHTSGFQIYITLPKEDKP >gi|312957683|gb|AENW01000003.1| GENE 65 63385 - 64338 357 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 1 284 3 301 312 142 32 1e-32 QGQGGSIMIIEVNNLVKRYKELIALDHFRLEVEEGEILGLLGPNGSGKTTAINCMLALLT YDKGDIRIFGKQMKADSYDLKQQIGVVPQNVAVFHELSVEDNINYFCGLYVSDKAKRKTL VDEAIRFVSLEEFRKFRPGKLSGGLLRRLNIACGIAHQPKLIFMDEPTVAVDPQSRNAIL EGIRRLNAQGATIVYTSHYMEEVEEICSRIIIIDKGKTIAAGSKEELKAGIMMKEKIEVE QVKLQEQQVQDIQDIANVFSVQYNANVLQVKFTEGKRNLANLLDYFTQENITYGKVYSQQ PTLNDVFLEITGKQLRD >gi|312957683|gb|AENW01000003.1| GENE 66 64351 - 65478 1140 375 aa, chain + ## HITS:1 COG:no KEGG:FMG_0240 NR:ns ## KEGG: FMG_0240 # Name: not_defined # Def: antibiotic ABC transporter permease protein # Organism: F.magna # Pathway: ABC transporters [PATH:fma02010] # 2 372 3 365 365 183 33.0 1e-44 MLHLLKYRFRLMIRNRVLLFWTLIFPMLLTTFFGMVLKDAYTVDTFQTVPIAVVEQKDLS QLKAVLKDVRQGDTALFKVSYVGEEQAKQLLKEDKVSAVVKLQDPIAITVNQNGLDQTIT KTFFDEYSQKIHLVEEAMQQYPDGSAVSALFTQTASHVKEANTDHTDLSSVFFYTVLAMN AMFGGYWAINSMYELQANQSERAARLAVSPLHKGKALLADFIIDIAIQIVFLLIQFAYMY FILDVSFGSQLGYVFLMMVLGAFAGNAFGILIGSITSKIPPDGKTGIMTSITLICSALAG MMAVQLKYYVQEYAPFLTYINPVNMITDGLYSLYYYGVGERYFFNLALLAGFTMVCYLIS FRALSRKSYHSLGVR >gi|312957683|gb|AENW01000003.1| GENE 67 65479 - 66681 1222 400 aa, chain + ## HITS:1 COG:no KEGG:FMG_0241 NR:ns ## KEGG: FMG_0241 # Name: not_defined # Def: putative ABC transporter # Organism: F.magna # Pathway: ABC transporters [PATH:fma02010] # 1 374 1 355 370 146 28.0 1e-33 MSVLKVYYKIMKSHWLTLMIYMSIFFTVFFVFGMSASERSDIKMYEGSKPNIAVLDRDGS SLSEGLLTYLGTQANIKHKNVSNSDAQDALFYADVSAIITIPEGFEEEFASGKEAVSMNQ RPDDVNGVLLQQTINKYLDTMHAYEKLYPKQGISELHTRVQKNLNTTAEVKMSDSEEVAT SSMLRGAYFNYASYIMLVITILLIGLTMHSFFNAEITKRNLIAPVSQNRMNLQLVFCNLS VGIALWGLMMLMILGMVWDSMMTLGGLLEIVNAFVFMLMCVSMSFMFCVISAKSKHPDDM LNGISNIVGLGSSFLCGAFVPLSMIGENILVISRFLPSYWYVKLNDSLTSAVHVGDALLQ EAFMTYGILLLFAAAFLCIALVIMKNRRTQDALEDTSMQP >gi|312957683|gb|AENW01000003.1| GENE 68 66841 - 69204 2581 787 aa, chain - ## HITS:1 COG:L168650 KEGG:ns NR:ns ## COG: L168650 COG0474 # Protein_GI_number: 15672557 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 15 756 4 753 775 563 42.0 1e-160 MHSNDDKREWIDPAQGLSDSQVQERIDAGCVNTQDERITKSYEEIFRDNVLTLFNLINAI LAGLIIFIGSFKNLLFLGVVISNLVIGILQEIRAKRVLDKLSLITQPYLKVLRNGKEMEL HMDDIVLDDILCLSTGSQVCADAMVVEGRLEVNESLVTGESDIIVKHMHDTLYSGSFVVS GQAKVQVQHVGKDNYAATIMKDAKTFKKHKSQLRDSINFIIKTIGIIIIPVGILLFSKQF FLTESTLPQAIVSTVAALLGMIPEGLVLLTSVALAVGSINLAKRKTLVQELYCIETLARV DTLCLDKTGTITEGNMQVERIQALNADEKEILLILANMMDALQDDNATAQAIRRHTPQEY EAFRVLHTLPFSSARKLSAVSFENRGTYIMGAYEFVNGSENAELQAEIDKQASLGNRVLV LAHSKEAMEQEPAKNNTVIALILLSDPIRLEAPQTLDYFLSQGVDVKVISGDDPRTVHEI AHKANLKNYERYVDASTLKDEDIPEAVKAYTVFGRVSPMQKKLMIRALKEQGHITAMIGD GVNDVMALKEADCSISVAQGSEAAKNIANLVLLDNNFASMPHIVDEGRRVINNIQRAASL FLVKTTFSTILSILTLFFMSRYPFEPIQLTLISSCTIGIPSFFLALEANHARVEGNFLIN VLGRALPGALCVVLSILYVNISSLFFQMTPAAMSTMCVLLTGTSSLIVLYRVCTPFTRKR LLIFSSMTALFVACIVFLPGIFSLVRLSYMQFVLTGAGMAAIPFVMDFFFRFGNRFKLKE RLLKVGK >gi|312957683|gb|AENW01000003.1| GENE 69 69640 - 71193 2010 517 aa, chain + ## HITS:1 COG:BS_yfmM KEGG:ns NR:ns ## COG: BS_yfmM COG0488 # Protein_GI_number: 16077809 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 517 1 518 518 671 63.0 0 MSIVTVENVSHSFGGRQILENVSFRLLSGEHVGLVGANGEGKSTFLNILTGKLVPEEGRV AWCRRITRGYLDQHTVLEKGKSIRQVLQDAFSHLFELEAEMLQKYEEMGDCSEERMNELL QDVGEIQDILEHSGFYMIDARIQEVAQGLGLLDIGLEKDVTMLSGGQRSKVLLCKLLLEN PMILILDEPTNYLDEGHIAWLKNFLISYEHAFILVSHDIPFLNSVVNIIYHVENCELTRY VGDYDYFLEQHALKKRQLEAAYVKQQKEIADLEDFIARNKARVATRNMAHSRQKKLDKMD RIEKVKEKVKPSFSFLSDRAPGRVIFDARELVIGYEEPLTKAMHLVLERNMRVAIKGVNG LGKTTLLKTLMGRIPGVSGSVEVDPYASIGFFEQEEAGESMSALDYFWKEYPAMTNGEVR AALAKCGLTTDHIESGMCVLSGGEQAKIRLCVLMNREHNVLVLDEPTNHLDVDAKEELKR ALKAYKGTILLVSHDPDFYGDIVDEVWNLEEWTTKIL >gi|312957683|gb|AENW01000003.1| GENE 70 71298 - 72236 893 312 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914731|ref|ZP_02076945.1| ## NR: gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 [Eubacterium dolichum DSM 3991] # 11 308 11 317 317 182 36.0 2e-44 MQKEMKREYPIPFHNDVFFKYMLIGEDAGSKLLRSRIIEEIYGLKVQRTQVLNPELLPEV FFGKRAVLDVVLEDETGHLYDLEMQVSGYTKEEQLRFQQYGYRLVERQLKQGDDYTKLKP FYQIIFMNSMPKAGGRMIRHYTVKDEDNQEEPNNTLHRAIVFLPMIRQRVKEVGGMENLT EFETFCYVLAYNPDDAILNMKRRMVNVAMEKYNEMREDGPLFSWAESVEFANRAVQANLR EQTAEAKRQGKDEGLDQGKKALLKAQIIHKYGIDDGWVDTLSNAQIDAAVIFILECEAYP DLKEKLKHTAAE >gi|312957683|gb|AENW01000003.1| GENE 71 72892 - 73044 198 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSQISKETKELNKAWVSKQQDLHKTYSSYIIGGGVLVVIVLLILLAIMYL >gi|312957683|gb|AENW01000003.1| GENE 72 73257 - 73532 192 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRIKKRVLSGGVVVLTVFLVLGVCKPDIDKFCRQNRSITAFFASKGVDSFGEYLGGFMFD AAALGVCAVLVFFIARHIGTRFHNLQDRRKK >gi|312957683|gb|AENW01000003.1| GENE 73 73556 - 74008 557 150 aa, chain - ## HITS:1 COG:no KEGG:BCAH187_A3483 NR:ns ## KEGG: BCAH187_A3483 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_AH187 # Pathway: not_defined # 7 138 4 134 154 79 43.0 5e-14 MSYICSIFFALLAGVSIVLSRSVNALLAEKIGALSSSFFNYASGLLASLAFLLLFAPHIS PALPQLMKNGNAILLMGGVIGVINIILLNRIVTRIPPLQLTLIVFVAQLASGMLLDYFLL DLFSMRKLIGCSIVVIGLLIHTYAQGKPAA >gi|312957683|gb|AENW01000003.1| GENE 74 74005 - 74424 353 139 aa, chain - ## HITS:1 COG:no KEGG:BAA_3543 NR:ns ## KEGG: BAA_3543 # Name: not_defined # Def: hypothetical protein # Organism: B.anthracis_A0248 # Pathway: not_defined # 5 137 13 145 148 79 41.0 4e-14 MAISMAILSGIVVSVMMVFNGQLSDLIDLYTATVLIHACGLLTMYIVLKVKHISLRDLPH ASRFLYLGGVIGVFTVFFNNLTITILGASMISALGLCGQMLTSIILEQSGALGTQKQKLQ PIKLVSLLIILIGIGVMLE >gi|312957683|gb|AENW01000003.1| GENE 75 74562 - 75233 568 223 aa, chain + ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 34 217 26 208 219 92 33.0 6e-19 MEKTAAAYIRKYRLDQILEERHVSMLELKTWKRRDILLHADTELHHLLFLVEGKAKTSYI SANGQTVLHSFLYPLSILGEVELWKQMPVLNEVTALSEVITLQLPLVRCEQSLRQDVRFL QYLVSELSEKLKNSNRNASISLSYPVENRLASYLMAVCERDVFQEDHGEVSSLIGCSYRQ LQRCLSQFCEQGLLYKCEKGVYRINNRKQLQTLGQDIYGGITS >gi|312957683|gb|AENW01000003.1| GENE 76 75230 - 76090 942 286 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400720|ref|ZP_06644865.1| ## NR: gi|293400720|ref|ZP_06644865.1| hypothetical protein HMPREF0863_01005 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 284 1 284 288 261 45.0 3e-68 MSVDIKIVNRGIFKKKLSMHDFLETGLQAGVMDSTWRMQPLEAESADDFILYDPSCIARG IQVVWKQPYEVELYLLLPTCHQEIEAFYALIQHLCKRWKTSAFEQDGETQELRSIAGIKQ HLTTFSDECLGSFLKEHADGCFFSAMHPLWFEQQDHEEMHDDFGAWLHNHQKQDVYYAVP RVYQKEDGFFGVYTITSTVDSLLPIKPEAPFGMKDPVSGEDIQIDTWYAAFYDLEEETFL GQLPYEAFVKEIHLSECERYDAKMRKLPGMRAAHQRELIQQYGVDI >gi|312957683|gb|AENW01000003.1| GENE 77 76364 - 76975 632 203 aa, chain - ## HITS:1 COG:lin1323 KEGG:ns NR:ns ## COG: lin1323 COG0344 # Protein_GI_number: 16800391 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 203 1 198 198 134 46.0 1e-31 MNINWIWYLGLGYLLGSIPFALVIGKLFYKTDVRNFGSGNLGGTNAGRVLGKKAGISVIV CDVVKVVVAVGVVSCFDLEASIWAGFAAAFGHCYPVFAGFRGGKAVATMFGFLLSTSIFT FQSAWYLIVPFAVFLVVLYAGKMVSLSSMCAALTSSIYITVMQLHISVEIVAASWLLTIL VIYRHRANIVKIKNGTENKISWL >gi|312957683|gb|AENW01000003.1| GENE 78 77199 - 79130 2525 643 aa, chain + ## HITS:1 COG:SA1188 KEGG:ns NR:ns ## COG: SA1188 COG0187 # Protein_GI_number: 15926934 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Staphylococcus aureus N315 # 3 639 6 646 665 790 64.0 0 MAENAYDGSSIQILDGLDAVRKRPGMYIGSTDSRGLHHLVWEIVDNSIDEALNGHGDTIR ITIEKDNVICVEDEGRGMPVDMHASGVPTVQVIYTVLHAGGKFSTEGGYKTSGGLHGVGA SVVNALSEWVEVTVHRDGKIYRMSFSDGGREVSKLEVIGKTNKTGSKVRFKADKTMFSTT KYSFHQIAERAQEDAFLLEGLKLVVRDEREGKEREEVYHYEQGLVAFMEYLHEDKQVFHK PVAFSGMSNEIKVDCAFQYTDEYQENIFSFVNIVRTKDGGTHETGAKNAFTKVFNEYARK NGLLKEKDKNFEGSDVREGLTIILSLGVPENLLQFEGQTKGKLGTAEAKAAVDSIVSEKL SFFLEENKELAITLIKKMQRASTAREAARKAREDARKGKTRGKTEKILSGKLASAQSKDA RKKELYLVEGDSAGGSAKQGRDSKYQAILPLRGKVLNTEKASITNIEKNEELNTIIHALG AGVGANFHAEDSNYHKVIIMTDADTDGAHIQILLLTFFYRYMRELIEQGMVYIALPPLYK LQKGKEIQYAWTDEELDELRKTFPKGFSLQRYKGLGEMNADQLWDTTMCPETRTLIQVTI DDAVVAEKRVSVLMGDKANLRRDWIEENVSFTLEDDYEVEARR >gi|312957683|gb|AENW01000003.1| GENE 79 79127 - 81622 3010 831 aa, chain + ## HITS:1 COG:BS_grlA KEGG:ns NR:ns ## COG: BS_grlA COG0188 # Protein_GI_number: 16078871 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Bacillus subtilis # 19 774 11 764 806 764 52.0 0 MKKKELPAVEHHSSVISSPLEDIMGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYAMY EDGNTWDKGYRKSAKTVGLVIGNYHPHGDSSVYDAMVRMSQEWKIRTPQIDMQGNNGSID DDPAAAMRYTEARLGRISEHLLKDIEKETVLWAPNFDDTAMEPTVLPARYPNLLVNGITG IAAGYATNIPPHNLSEAIDAAVYRIQHADCSLDELMEYIQGPDFPTGGIVQGIEGIREAF ETGKGRIIIRGKANIEQKKTVQQIVITEIPYEVIKSNMVKKIDDIRLNKKIEGILDVRDE SDRNGLRVVVDMKKDANAQVILNYLYKNTDLQVSYNYNVVAIVDKRPVQMGLAPMLDAFI EHRREVIERRSRFDLKKKEDRCHILEGLIKAVSVLDEIIALIRASKDKADSKRRIMDAFA FSDAQAEAIVTMRLYRLSSTDITQLREEYAALLNEIEELHDILENPKMLKKVMIRELNEV KKAFKTPRLTSIEHEIEEIVIDKLAMINSEQVMFTISRDGYFKRVSMRSYGASRDDMTGL KEGDHLVGYGEVNTLDHVLFFTTQGTYGYTPVYDVEESRWKEIGSHINSTIRISGEEKIT DAFVLRSFATNAYMISVTKNGLVKKTAVREYEVSRNNKTMSNMKLLDGDAVVKTMVAYAY DEILIASKNGFVSRYPVSLIPETSPRSKGVKAMNLVLDEIVSACISHGDASQLIVFTDQC QMKRIKLSDVDVTGRPTKGSMICKKVKSKPYQIAHIALHDLNDELVIINEETQKILAKDI SLMSKDATFSSPLHTTQDYYFLRTLAAVEQRELPAIQEEKQEFEEIELFED >gi|312957683|gb|AENW01000003.1| GENE 80 81838 - 83097 1285 419 aa, chain - ## HITS:1 COG:XF1408 KEGG:ns NR:ns ## COG: XF1408 COG1508 # Protein_GI_number: 15838009 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Xylella fastidiosa 9a5c # 1 416 1 458 462 194 30.0 4e-49 MKLETRVLQNLTQQQKLSIRQQQDLKILEMNNQELESWIEEELEKNPLLEFDDAYETGAA SHSQQDFDLLLNFVTNEQTLADVLQEQIATCLHPLHKELAEFIVNSLDGNGYLQLKDEDI QRMLPQYSLDDIEDTINEIQTFEPAGVCARSLQECLLIQLCFEDIPYSQIAIMIVNFYLK EVSENKLPAIAEALQIPLEDVLQAISLIRSLDPKPGARYATSSAYVNPDMQIVVEENEIH IQMFRKTYGLRLQAPVKDADADTAKYLSQQQKQAEALLSSIEKRNSTIERIMEVIAVVQQ DFFLQHGQLKPLNMKDIAAKLSLHESTISRAVSGKSILFEQQIIPLKFFFPARVNEDTSA NEVHLRLRSLIDQEDKKKPYSDQKLCDLLKEDGLEISRRTIAKYRDQLKIPAASKRKQF >gi|312957683|gb|AENW01000003.1| GENE 81 83219 - 85009 1687 596 aa, chain + ## HITS:1 COG:CAC3034 KEGG:ns NR:ns ## COG: CAC3034 COG0249 # Protein_GI_number: 15896285 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 8 595 9 598 598 337 33.0 5e-92 MQIDTLQRKIDETQAVCRSLKQRSSSYAMQRGVLILIALLALFRGYYYEQLFYALCVLSL GLFLYIAAKHRALKQRIEDHEVMMEVLQDVLRRKNNGWKAFQDTGSEFLQEENTQAYDLD LFGDASLYQYLCVAKTVYGRERLAELLSAQQQSRKAMQSRSAAVQECARKTTFTFTLIQL LKLYERHGQRKKRSTMEHILSYMEEEQVQYPRIVRMLCALVSALTLMTLLLFLSGIIHYG PVLILATVSLCLSLLFFMKHAQQLSGVAPLAYLIEDYERIFHLIEDTAFQSDALCRIRSD VEEACAAIKKLRRILMLVQLRSNSILFFLVNAFGLLDFQCVIALQDWRQRYGRTLRIWLQ DIGELESYLSLAQLNLAKEAVCIADSTPKPPYLHAVNIVHPLLEEGSAVANSITIDNGTY IITGSNMSGKTTFLRTLGINLVLMHAGAGVCADSFCAGSMNLFTSMRVHDNVSEGISTFY AEILRIQQMNEASRKQEPMLVLIDEIFKGTNSADRIYCATSAIRHLHQPWIITLISTHDF ELCELSGDPAIRAVNYHFSEYYEKDRICFDYRLKEGKCTTTNARELMRLAGFKEEV >gi|312957683|gb|AENW01000003.1| GENE 82 85006 - 87186 2366 726 aa, chain + ## HITS:1 COG:CAC2947_1 KEGG:ns NR:ns ## COG: CAC2947_1 COG0550 # Protein_GI_number: 15896200 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 614 1 615 618 666 56.0 0 MSKTFVLAEKPSVGRELGRVLGCPIKKDGYMEGNKYVVSWALGHLVELADPQDYDKRLET WDMQDLPMLPDKMQLKVISQTAKQYKLVKSLLHRGDIRDIVIATDAGREGELVARWILEK AGVRKPMKRLWISSQTDKAIKEGFAHLKDAREYEPLYRSAVCRAEADWLVGLNTTRALTC KFNAQLSAGRVQTPTLAMIVDREAEIRKFVPKEYFTLRVDAGAFVLDYRKNNNASIMDRK QAETLMKQLKHKQITIQDVERKRHKEQPPQLYDLTELQRDANQRFGFSAKETLNYMQSLY ETHKLLTYPRTDSRYLSQDIVGTLKERLQAICIDVYEPFARDLLKNGYKVSRRFVDDAKV SDHHAIIPTEEYVELNRLSPNEKKIYDLVVRRFLAVLGKPSEYEKTRIHAVCEHMDFYAS GRIMISDGWRALYQKNERFDEDEEQDDDQNLPSLAKGQQYPIRDVRITSHFTKAPARYTE ATLLSAMEHPSKFISNSRMKAVLEDANGIGTVATRADIIEKLFKTNYIEKRGNSIYPLSK GIQLVSLVPEELRSPLLTATWEEKLTAISKGKLKDKSFMKEMRSYASDLVEKVKNSEASY RHDNMTQKKCPECGSNLLEINGKRGKLLACSSPSCKYKQNLSFTSNARCPKCHKKLNVVG EKEKRLYTCVCGFREKFDRFNEQLKEKRNVARRAELQDFNKKQEAEKKQEKSAFQLAWEA AQKAKE >gi|312957683|gb|AENW01000003.1| GENE 83 87191 - 87610 580 139 aa, chain + ## HITS:1 COG:VCA0401 KEGG:ns NR:ns ## COG: VCA0401 COG0346 # Protein_GI_number: 15601164 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Vibrio cholerae # 1 133 5 136 137 161 60.0 3e-40 MKQAIVHIALVVRDYDEAIEFYTNKLHFTLVEDTYQPQQDKRWVVVSPPGSNATTILLAK ASKPRQEAFIGDQAGGRVFLFLATDDFKRDYRDMKKNGIHFVREPKEADYGTVAVFEDLY GNLWDLVQFQEGHPMCKRL >gi|312957683|gb|AENW01000003.1| GENE 84 87905 - 88444 215 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227377719|ref|ZP_03861180.1| acetyltransferase, ribosomal protein N-acetylase [Kribbella flavida DSM 17836] # 1 173 19 196 197 87 31 4e-16 IQFLKGERVYLRPFTEEDTDFFDVWYNDALTRAKIAAPYPTTAAQSLQCVQRSGHDCIWL AIATCEKHEVIGEIGLLRMYPAWGTSDLTIIIPHEAHQGKGYGTEAIRLLMDYAFGDLGF HRLAIGVVGFNTDALRFYKKNGFKKEGIQEDGYYYHYEYHNFIMMRILKEEFLQLIRQK >gi|312957683|gb|AENW01000003.1| GENE 85 89121 - 89645 785 174 aa, chain - ## HITS:1 COG:SP0989 KEGG:ns NR:ns ## COG: SP0989 COG0494 # Protein_GI_number: 15900864 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 2 171 5 178 181 140 49.0 1e-33 MQKKISSTPVYEGTIFHMSRDEVEIKGKTYPRDVIHHDGGVGVLAIRDGKILLVKQYRYA IQKETLEIPAGKLEKGEDPYLCGLRELEEESGYTSERLETLCAMYSTPGFCSEKIYLYWT KKLIPVEHPRAMDEDEEIETLWVDIRKAAVMVNDGTIEDAKTIIAIQYANLYLV >gi|312957683|gb|AENW01000003.1| GENE 86 89692 - 90402 840 236 aa, chain - ## HITS:1 COG:alr0093 KEGG:ns NR:ns ## COG: alr0093 COG0860 # Protein_GI_number: 17227589 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Nostoc sp. PCC 7120 # 52 236 452 624 627 106 34.0 5e-23 MRNIRRWARLLILCLTIGFLSAAAQQGYAWLTDKATSSPLQVEAASFDASKVIVLDAGHG GYDTGSVSYDGVYEKDITLAITQKIGERLEKAGYTVVYTRTSDEVSWSNDNRDDLRTRVA IGEEAGADYYISIHTNASEYGDGASGFEAYIDYENDTITAMAQSIEQKLMQLGYTQNRGL KSTQDSSLYVIDSNPVPAMLLELGFITDSADAAYMCSEEGQNALAQSIAQGILEQL >gi|312957683|gb|AENW01000003.1| GENE 87 90537 - 90977 635 146 aa, chain + ## HITS:1 COG:no KEGG:BBR47_41040 NR:ns ## KEGG: BBR47_41040 # Name: spoVAC # Def: stage V sporulation protein AC # Organism: B.brevis # Pathway: not_defined # 3 143 13 153 157 122 46.0 5e-27 MDKKTLQDTAKKHVPAQHKGRNALIAFISGGALAVVAQLFMMLCMDMFDLDKDTAVSVTV VTVILVTALLTGFGVYDKAAQKCGAGLFIPISGFANCLTSCAIEGRTEGPIFGIGSNMFK LAGSVLTYGIAAAFVFGTIRYLLFGA >gi|312957683|gb|AENW01000003.1| GENE 88 90979 - 91977 1111 332 aa, chain + ## HITS:1 COG:no KEGG:BL00782 NR:ns ## KEGG: BL00782 # Name: spoVAD # Def: stage V sporulation protein AD # Organism: B.licheniformis # Pathway: not_defined # 2 330 7 335 339 342 50.0 2e-92 MRTVTFKNVYVQARSAVVGPLEKEGPLGSLFDKSYEDAYCGESSFEKAERVLLGDAVDLT LRKAGKGVQDIDLLVGGDLINQLTSSHYFAKDLEVPFLGMYGACSTSSLVIGTGAVWVEH GLARQVLAFTSSHVATAERQFRFPNEYGIQKKETTTSTVTGAGAALLSNEKSNIRVAAFT PGRIVDWDHKDANDMGLAMAPAAYDTITQHLKDMHRELKDYDMIVTGDLSKIGFSFLVDL MNQEGYDIDNRLHDCGLMIYDFEHQDIFCGGSGCACSMCVSMAKLLKKLEDGECSRIMVV ATGALLSPVAVAQKGTIPCIAHAIVYERSDVK >gi|312957683|gb|AENW01000003.1| GENE 89 91974 - 92327 480 117 aa, chain + ## HITS:1 COG:no KEGG:RBAM_021510 NR:ns ## KEGG: RBAM_021510 # Name: not_defined # Def: SpoVAE2 # Organism: B.amyloliquefaciens # Pathway: not_defined # 2 116 1 115 116 114 58.0 9e-25 MMTFISAFVVCGGICLAGQLIYDNTKLTAGHITSIFVVIGAALDTFGWYDKLLEFAGMGA SLPITSFGHSLIHGALAKAQSDGVMGILLGMFDLTAAGITSAILFAFLAALVFRAKS >gi|312957683|gb|AENW01000003.1| GENE 90 92327 - 93703 1574 458 aa, chain + ## HITS:1 COG:no KEGG:Amet_3212 NR:ns ## KEGG: Amet_3212 # Name: not_defined # Def: GerA spore germination protein # Organism: A.metalliredigens # Pathway: not_defined # 3 455 17 482 488 305 34.0 3e-81 MKDLNQRLEEIRTALSPSFDIVYRHVTIQNTQAWLIFLSSLSDSELIASLVEGFVITAGN DLHITFYPGAIDKLTDRKKAITNMLSGQCLVLMDTSEVYYCIETRHYPARSTAEPNVEKS VRGAHDGFVENVILNVGLIRRRIRDPRLVVTMNKEGIKTRTDVAYLYIDGLVDVDVLHDF ETRMHTLPEAEILSERNLVELLYGKTWNPYPHVRYCERPDICAIHLLQGYLVALVDNSPT GVILPTTFFEQTKQIEEYTQTTLVATFTRVLRLIGIVFSLYLLPLWIALVIDQNPTLLNI PIQHVNVYQFGFQVILADIIVEWIRQSLIHTPTILSSIMSFVAVFLLGDMAIELGAYTKE VLIMVALVNIGNLLTPSYELSLANKVFRIFIGFLALVFGVSGFCVGVLLHIVILLSTKTI KFPYLYPLIPFSYKECQRILFGAPIKVKRDTTSKSTKR >gi|312957683|gb|AENW01000003.1| GENE 91 94225 - 94506 135 93 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKKRAAGAIAVFIAGILAGYFIDGILIYTTGYSGGELCAQGLTALKNFGNRNASKVYFN ANKSTYVYSYITKDGQQCTRTPSGTQYVCAYSG >gi|312957683|gb|AENW01000003.1| GENE 92 95260 - 95997 1036 245 aa, chain + ## HITS:1 COG:lin2065 KEGG:ns NR:ns ## COG: lin2065 COG1354 # Protein_GI_number: 16801131 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 7 223 8 226 249 126 38.0 3e-29 MAFTVTIDQFEGPLDLMLHLIKDNKLDLFELDMDLLTDQYLHYLNAMESMHLEIASEYLA ELAGLIEYKSKKLLPREKVVIEEEYEEDQREKLVRRLLEYQRYKEISEQFEQKYEERQLM MSKPMSEETQKWLNTTVEGEFVGNPYDLIKAMNRVLRRAALTHPYETRMTVKELSLDERV IQIKKRLKNWVGKMSFEELCSDCTDLHMIIVTFLSVLDLIKHKEITFHIDEEENIWIIRG EQIYA >gi|312957683|gb|AENW01000003.1| GENE 93 95990 - 96538 834 182 aa, chain + ## HITS:1 COG:MYPU_1160 KEGG:ns NR:ns ## COG: MYPU_1160 COG1386 # Protein_GI_number: 15828587 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Mycoplasma pulmonis # 5 171 13 179 207 132 42.0 4e-31 MHEHEKRVLEGLLFLSGDEGLSIEQLNGCVEELDKKEIEVVLDELMQDYLADVHGIELVR FGGIYKFVSKEAIHPYAQKLFSSTKVATLSNAALETLAIIAYKQPITRAEIEEIRGVSCD MMVRKLLARNLIKECGRSDAPGRPFLYEVTEEFMDTFKLVSLKELPELPDFKDTMEEELF EE >gi|312957683|gb|AENW01000003.1| GENE 94 97296 - 98279 1249 327 aa, chain + ## HITS:1 COG:BS_dacB KEGG:ns NR:ns ## COG: BS_dacB COG1686 # Protein_GI_number: 16079376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 16 263 29 277 382 222 47.0 6e-58 MKRSLCILLCLLLQLMSVHAESYVVLSGADNTIVEEKNKDEKQSVASISKIMTAVIAIEH GQLDESFAVDDEINKAYGSSVYLKQGQQVTMRDLLYGLMLRSGNDAAVEIAKHVAGSQEA FVELMNHKAAEIGMSNTTFSNPSGLDEEDGGNISTANDMAVLMSYAMKNKEFRTITGSKY YTTDWNMRWKNKNRLLFDYPFTVGGKTGFTKKAGRTLVSAAEHDGVESIVVTLREGDDFA FHEQKHTEVFQKMDVVTIMRKGDYTVNGRKFHVPETLKVTLHKDGSDKLRVKTHYDHKDF VVEVQKNDDVNVYSFASKKVRGGGLFS >gi|312957683|gb|AENW01000003.1| GENE 95 98276 - 98848 651 190 aa, chain + ## HITS:1 COG:BH1574 KEGG:ns NR:ns ## COG: BH1574 COG2715 # Protein_GI_number: 15614137 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for spore maturation in B.subtilis. # Organism: Bacillus halodurans # 1 189 2 190 197 150 38.0 1e-36 MNIIWLLIVLVTILYCLMTGNVGIINDVFLNVGKETLDFVIPLLCVTCFWNGILYIARDA GIIHGLERLFHPLLKRLFPDLKDDEETLGYVATNVVVNMVGLGSAATPVGLQAMKGMQRQ NPDKDTASRSMITFLVLNTAGVTLLSTTLIALRASFHSLHVTGFMPYAIVSTLFASVVGL SIDRWWNYRD >gi|312957683|gb|AENW01000003.1| GENE 96 98841 - 99353 526 170 aa, chain + ## HITS:1 COG:BH1575 KEGG:ns NR:ns ## COG: BH1575 COG0700 # Protein_GI_number: 15614138 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Bacillus halodurans # 6 170 10 176 178 118 41.0 4e-27 MINTDYILPILVLVIVAVALLRRINAYHSFTEGVKDGMKLFLDIYPALLAMMCAIALLRQ SGLMDILCSALAAHIANIPKEIWPMVIFRPISGSASLAVLVDIFQVCGVDSLAGNMASII QGSTDTTVYVITLYFSSVGIRRIKNALAIGLLADVAGISMAILLALYVFA >gi|312957683|gb|AENW01000003.1| GENE 97 99384 - 99713 584 109 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADMNDVKNRLKNMLAVNEEKAAVAAEKSDHVVCVFRLDSFDDVEAVGEALKKNFLVLLD ITACDEECARRIRDFMKGVAYPMQVWIQEMSENILVYLPDGYQIQEFQN >gi|312957683|gb|AENW01000003.1| GENE 98 99775 - 100512 928 245 aa, chain + ## HITS:1 COG:BH1576 KEGG:ns NR:ns ## COG: BH1576 COG1187 # Protein_GI_number: 15614139 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Bacillus halodurans # 1 237 1 237 242 222 52.0 6e-58 MERLQKVIAAAGITSRRKAEVLISEGRVAVNGETITELGYKVKRGDLIEVDGKAIEKEDK VYFLMNKPKRTMCTSDDEFGRQTVVDLVDCRQRIFTVGRLDYDTSGVIILTNDGDFANEI IHPRYHIPKVYNLTINGILTPEDMKKIKAGIVLDDGIKTLPAKYRMTEKDTEKNQCSFDL TIVEGRNRQIKRMMEALGYEVRRLHRSRLAFLHCSDLRQGEYRVLKPFEVKQLRSLAQKG EMKQR >gi|312957683|gb|AENW01000003.1| GENE 99 100737 - 101495 638 252 aa, chain + ## HITS:1 COG:PA0419 KEGG:ns NR:ns ## COG: PA0419 COG1385 # Protein_GI_number: 15595616 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 18 234 19 229 240 151 38.0 1e-36 MQQYFVNTLAMPGELIPMTKEQTHHIRRVMRMQQGDVIRVADNSGRVLLAEVEYHQEEAA ARVVREVRDCSQTSVELILAQGMIKGEKWDYLLQKSAELGVAEIIPFVSSRCVVKIKDEK SEKKIVRWNKILCEACEQCKRSTLVRLQPPCTFSQLSQIDADLRLIAYEDADCKSERLCE VLRAHPSPKRVLMVVGSEGGFSADEVEALTATGFHRVSLGGRILRAETAAISLLNSIEFY YDMAGEKDEDDI >gi|312957683|gb|AENW01000003.1| GENE 100 101479 - 102264 929 261 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400697|ref|ZP_06644842.1| ## NR: gi|293400697|ref|ZP_06644842.1| hypothetical protein HMPREF0863_00982 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 239 1 241 262 195 48.0 3e-48 MKTIYDRLNKVYDKTLLDQKDIRKHYRTICDLLEEYQIPHDGKSDDAVIQNEIVYESLLV KRQFEDVFFDTYVKMFDYWYDLNYLERKAQMNVDVERFVKELRHFEADGETIYMPAFAPG FNHLYHTEIVLLDLKQYHKFIRECAKEVQYRRYGAKPFQYGFSSCELLAEADEGYVVFHP ILHRWYLYDAGGLKRSVSVDMKQELQEDWKQEIALLLLKEQHEALVAFLNEHALIKKRLG RKLEKLLEKQKRKQEKKADKE >gi|312957683|gb|AENW01000003.1| GENE 101 102269 - 103594 874 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 400 1 406 451 341 41 2e-92 MTTFAIATLGCKVNTYESQGYESALLEKGYEQVSFKEKADVYIINTCAVTNTAGSKSRQK IHAAIALNPEALIAVVGCYAQTASEQLEQDANIDILLGSDGKSRLADMIEEGLRKKRPQK LIHDVRKVNVFEALPIHRFEHQTRAFLKIQDGCNQFCSYCIIPFARGAERSLPEDEVLAI ARSLSESGHREIVLSGIHTGRYGNGINSSLCQLMKRMVKEIPKLQRIRISSIEMNEITDE LLEFIKGEEKIARHLHIPVQSANTTVLKNMNRPYTIAWFMERVDYIRSLIPDISISSDVI TGFPQESEEQFQDTLDNIARMRLSFLHVFPYSRRDHTAAAQMSGHLENKIKKERASRLAN LSKQLYTAYKQNFIGKEVSVIFEKEKDGKLIGHSSEYLEVAAAAPLAWLHTMHTVRITAL DGDLLVGCPLKEESYEAVSNV >gi|312957683|gb|AENW01000003.1| GENE 102 103572 - 105032 1649 486 aa, chain + ## HITS:1 COG:BH2571 KEGG:ns NR:ns ## COG: BH2571 COG0769 # Protein_GI_number: 15615134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Bacillus halodurans # 14 476 23 483 486 314 38.0 3e-85 MKLSQMFENAPEIEIAGLCIDSRCAKANDMYFCMEGMVHDGHEFIDDVIEKGVKCIVHSK PVDDMKKGVAYIQVENVNRTLNRVASMFYGHPSRKMKVFGVTGTNGKSTITSIIRDVYSH FAPCGYIGTISISYGEVTLPPSLTTPDAVLIHKTMKDMVEHGMQAVALEVSSHGLELGRV QSVDFDVAVFSNLTYDHLDFHGTIEHYFEAKKKLFTNLKKEGVAVLNADDAYVDQLADAT EASVVTYGIDNHATYQAENIRIEKTGSRFTLVHGTERYEVSTNLVALYNIYNLLGAVAAM AESGIPIEQQLPYLHDIRQIEGRMERIDEGQLFNVIVDFAHTPDGMEKVFEYAKDITEDG HSIIAVFGSAGKRDTKKRRVFGEIASRYCDSIILTEDDPRDEDPREIANEIKSGISDTNN IFIADRYAAIRQAIESANVKDTVLILGKGDEVFMYREFGREPWMGDHNVARHCIRKYSLG LEDDEK >gi|312957683|gb|AENW01000003.1| GENE 103 105156 - 105335 241 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167754628|ref|ZP_02426755.1| hypothetical protein CLORAM_00130 [Clostridium ramosum DSM 1402] # 1 59 1 59 60 97 81 4e-19 MPKVVLKENEVLDDALRRFKRQVSRNGTLAEARKREFYVKPGVRRKLKSEAARKARRGK >gi|312957683|gb|AENW01000003.1| GENE 104 105568 - 106464 311 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 287 12 305 318 124 28 3e-27 MQIIEIERLSRDYGEGRGIFDISFSIAEGEVFGFLGPNGAGKTTTIRHLLGFLKAKQGSA KILGMDCWKQSDAITRQLGYIPGEINLLNEMSGEEFLRFMARYRNMQDSGRTQELLERFE LRPTGAIRRMSKGMKQKLGIVAAFMHDPKVLILDEPTSGLDPLMQNAFVELIQEEKQRGK TILMSSHMFEEVEKTCDRIGIIRKGHMAAIEDTVILQKNKTKTYILTFADSSQTQRFLQE RLQMKQISELCVHVYVREDLKVLLQLLPAYELRDLNVATQSLEDIFLQYYGEKGEAHE >gi|312957683|gb|AENW01000003.1| GENE 105 106457 - 107254 986 265 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1635 NR:ns ## KEGG: Cphy_1635 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 265 2 266 266 174 37.0 3e-42 MNKTLFRMEWKSAWKLLLIFILILAMYFSIMLTMFDPELGSALAQFEKLMPEMMAAVGMS GTAATLVDFFSTYLYGMIMIMFPFLFSVILSLRLLVKKVDNGSMTYLLSCGEKRSRVWMT QLAVLLSALFLLIAFCTLMGIVCSILMFPGDLDIAAFLRLNLGCLLLQTALASISFLASS ALNEYRHAALIGAGTGVVFIMIQMLANMKGNLEKLQYATIMTLFDTQGLIANEAQAWARL GVLLLIAGSCLLIARRSFMQRDLSL >gi|312957683|gb|AENW01000003.1| GENE 106 107597 - 107797 356 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSIDKNQVMIEHYRELTLVSETRIQVTMKSYRITIDGEQLHVLALGKDEILLEGSVQNL AFAYEK >gi|312957683|gb|AENW01000003.1| GENE 107 107787 - 108713 1010 308 aa, chain + ## HITS:1 COG:no KEGG:TTE0969 NR:ns ## KEGG: TTE0969 # Name: not_defined # Def: stage IV sporulation protein # Organism: T.tengcongensis # Pathway: not_defined # 19 250 29 268 404 69 25.0 1e-10 MKNRKGFGLDQWKVQASCDEFLWITKKNQLELYDITLHRNYIQFYASILQRPKIYRCFET CDLITTTGMLGYALRSLKKPYRIAAILLSILLWYGLSSMVFEIQIKGEKDESRKLIADTL KKMEVVPPFKSRDVSQLKTQLKKNLENDIAWLEIEKQGSRYLITYTPKEFASLSQLGHEE LIAQEDGMIERFDIQHGNKLHKVNEFVHKGDVLVSNVLEDSKGGKQEVYVKGRVFAYVWK DITVTMDKTREPKALQYFQLLFDARRKVSEDFHKDDRIYKENILQFSTDMGKIKMVIHYT LIKDITTP >gi|312957683|gb|AENW01000003.1| GENE 108 108729 - 109715 1084 328 aa, chain + ## HITS:1 COG:BS_phoH KEGG:ns NR:ns ## COG: BS_phoH COG1702 # Protein_GI_number: 16079588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Bacillus subtilis # 18 318 19 318 319 319 55.0 4e-87 MSEQFRIALEEYPMEWIVKLCGAQDKHLELLRNAFSCDIIMRDNELRILSEDAVTFHSIE SVVKALFNMMEAHIDVSGRDIEYACRLAKLNRLQELSTTYQKAIGKTVNGKLIYPKTIGQ RHLFKCMCNSEIVFATGVAGTGKTYLAVVYAADLLKKGEIRKIILTRPAVEAGENLGFLP GDLKEKVDPYLRPLYDALYDTLGQEQVEKLLEKEVIEIAPLAYMRGRTLDNAFIILDEAQ NTTRAQMKMFLTRMGFHSRIVITGDVTQIDLIKKRDSGLLNAKHLLSGIEGISFVELTSL DVVRNPLVQKIIERYEQEEERYGKDFID >gi|312957683|gb|AENW01000003.1| GENE 109 109693 - 110373 890 226 aa, chain + ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 3 221 4 234 239 177 39.0 1e-44 MARILLIEDEDNIRKIIAYDLKKADFDIVECGDGRTAVDLAMKEDFDVLIIDWMLPHVSG IDIVKKLRSEHIDAIFIMLTARDDETDILYAFEQGVDDYITKPFSPRELLARVNAHLKRQ NRKQEKRLSVGDLSMDMKRREAYIGERMMTLTKKEFDLLEYFIQNKDIVLSRDSILNDIW GFDYDGDTRIVDVHVFKLRNKLNASHVHIRSSRGVGYLLEEVHETQ >gi|312957683|gb|AENW01000003.1| GENE 110 110360 - 111580 1413 406 aa, chain + ## HITS:1 COG:BH3156 KEGG:ns NR:ns ## COG: BH3156 COG0642 # Protein_GI_number: 15615718 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 60 404 227 579 589 190 34.0 4e-48 MKRNKYGYLGLILACIAVVQYNYHLNEYVLLLLVVVSIALLWEFLDQKNLNVHRRENIEL QEEIKSTAKDAHLKNKQLLTVVTSIPFPMLLVDQFGNIVMHNNVSELCEDGPVGEHMTYT SNAYLHPVREFIKDAFILEKPMDKIIDINGVEYQSISVPVTAKKKYSGCLVLFQDISKTL EGEKMQKRFIADASHELKTPIAVIKGMVEILNREDFDDEETRREFMDQIEQEINRLDILV KDLLQLSRLSLSTVLLEREKTDLCLVIDKAVKSLEKKAEKKGLRIVKEYQNHDLVFCDPL KMSQVVLNLLSNAIKYSDRGTITLKTREEGSWYVLQVRDEGHGIVAEDLEKIFDRFYRVD DDRSRSSGGSGLGLSIVKSIVEAHHGEIKVESEFDKGTTFTVRLKN >gi|312957683|gb|AENW01000003.1| GENE 111 111632 - 112012 232 126 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1803 NR:ns ## KEGG: Cphy_1803 # Name: not_defined # Def: transposase # Organism: C.phytofermentans # Pathway: not_defined # 7 123 10 143 434 63 31.0 1e-09 MATNKNKHLTQDDRNVIAIGIVNGSSKKAIADNLGKDKSTIGKEIRAHRYLSHKSTLSLE CENYAHCKFKRKNCTVNCPDYSKFRCKRRDRTPGACNGCEKLKSCRFDKYLYKPTIAYEE YRSEFI >gi|312957683|gb|AENW01000003.1| GENE 112 112735 - 113223 450 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELTHSTRRFLKTAAPVIGSAGMLFAFYQWMVSRKGQAVEEMEYVQIQERELLKDLWNRY DMYRSVYQICDDYLDNDMMMTSQMIDTLKERLTDCQSLLRLNKPFIRKSVWDAYDGLLKA HNHFVEVVMWEMCEPEGMNAFLRDSRSDIYESEALLIELLRG >gi|312957683|gb|AENW01000003.1| GENE 113 113283 - 113573 349 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401464|ref|ZP_06645607.1| ## NR: gi|293401464|ref|ZP_06645607.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 95 1 96 97 91 44.0 1e-17 MTVKEIFKKAVIAGADPLSITELGFAYLNDIGTWNININSQNTGCKNKTITVEQLLDIFE HHCTCFRTQNECFEDKRKEMIQLLKEHDPQATIDFN >gi|312957683|gb|AENW01000003.1| GENE 114 113961 - 114548 601 195 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKLLRGFFTASAAVFLCSGCKGIPPENEAMSKALQNRDVTYSIVALDDKCFYLSLENQD LIFDYLMETDKNKEGGSYYTMEITTKKTDAMSFQWVQAVAYQNNTLKKIKNGDCDVMMDD AIHAFDSKKICTGAALQEARTYEAEIRKRLAAYGITPQDAFSYGRSYLKNNQDTALVNLD IMTRFKNIMPTNSSR >gi|312957683|gb|AENW01000003.1| GENE 115 114720 - 115670 988 316 aa, chain + ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 4 316 3 291 291 80 28.0 3e-15 MNMWKKTMTATVACLMTFSLAACGSSDEGKTAGVSGDIKVYTRDSSSGTREAFEKGVDFE GSLTKNAIEVSSNDDMAAKVGADKNGIGYTSLSTDFEKNGVSALQYEGVTASSESVLDGS YKLQRPFMYVTRAAGDYGSDDKEQLVQAFLDFMQNSTEGMAIVKKNGGEVDESKAKPWDE LSKKYEAVLGKDNSAITITTCGSTSVEKTVKASLEAFSPMAGNFKFTMNQSGSGDAVPRV LGKEKDGPNKGDIGFASRAFKEDGSEDISKAMESGQYCIDAVVAVVNKENTDVTSLTQAQ LKSIFTGETLKWEDIK >gi|312957683|gb|AENW01000003.1| GENE 116 115749 - 116690 1180 313 aa, chain + ## HITS:1 COG:VCA0071 KEGG:ns NR:ns ## COG: VCA0071 COG0573 # Protein_GI_number: 15600842 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Vibrio cholerae # 10 308 39 325 327 159 37.0 5e-39 MKSYVRDSISTEKNRKKLKKDQRMKAIFLLAALLSSSAIAIIIIFISVKGISPFLSGYSY GQQDIVSFLTGMMWRKDQGIYGVGFIVINTLVSAFGALVISFPLSVLTALFIAKIAPKHV AEVMTTVVELLASIPSVVYGVFASGTITVLVSSLASSLGFVTAGGSSLLAVILLLAIMIF PTITSLSITAIRSVDREVELGSLALGATRTQTNFKVILTSAKSGIFAGAILGIGRAFGEA TAVAMVAGNKMFGPTVNVFDTTRTLTTTMLAGLKETTGLDYDIRFSAGLVLMAVILLSNL LLNLMKKKVGNMK >gi|312957683|gb|AENW01000003.1| GENE 117 116687 - 117934 1362 415 aa, chain + ## HITS:1 COG:VCA0072 KEGG:ns NR:ns ## COG: VCA0072 COG0581 # Protein_GI_number: 15600843 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Vibrio cholerae # 191 415 66 289 289 168 43.0 2e-41 MIQTPSHQKRKRRLFDGLCNGVTYLSSGLSVFVLIAIFVFIFSKGFSSLGIDLLKGNYWS KNYLTSVETTKNHPGSFERPSSLSEEASFSSKWGIGFVDTKDQNGDAIVLVEYIDEASPF HYMKDESIKDKDVSLSTEVGFQVENLGYRTKSGATMIAGNIMSQNAAEVAQALDSSAQSI TKVYYKTPGGGIRGSIISTLYLILISLLISLPLGIASAIYLHEYAKPNRLTSLIRSAIEM LTGVPSIIFGLMGVAVLFPITQLFGATTTNILLGSFTMSIILLPTIIRSTEEALIVVPQS LRDASLSVGANQSQTIFKVVLPCAVPGILTGVLLSIGRVIGESAALIYTMGTYVNDTPTL MSQGTSLAVHIYNIMSSEQPNFELASAISIVILVFVLILNICVKLLSKKLNKSWY >gi|312957683|gb|AENW01000003.1| GENE 118 117950 - 118711 313 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 248 4 239 245 125 37 2e-27 MKKEPVFHVEHLNLFYGEKHALKDIGMDIEQNKITALIGPSGCGKSTFLRCLNRMNDLIE GCRIDGTIELNGVDAYGSEMNVVDLRTQVGMVFQKPNPFPMSIYDNITYGPKCQGIKNRK TLDAIVEQSLRKAALWEEVKDRLNDSAFGLSGGQQQRLCIARAIAMEPEVILMDEPTSAL DPIATNKIEDLMEELKKDYTIVIVTHSMQQASRVSDYTAFFLLGEVVEFNKTSRIFQQPC DKRTEDYITGRFG >gi|312957683|gb|AENW01000003.1| GENE 119 118724 - 119362 856 212 aa, chain + ## HITS:1 COG:STM3853 KEGG:ns NR:ns ## COG: STM3853 COG0704 # Protein_GI_number: 16767137 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Salmonella typhimurium LT2 # 3 209 13 222 241 98 31.0 9e-21 MIKIDKELDTMEENVLKMGQKVVRMHEKVVQALNSPNKEIELEIVQSDDIINHLEEEIND QAVRSLALLSPVASDLRKVVADIKIASELERIGDYAKNISIFLIKHDDMDASILDYAQAM EKGFIAMLQETMTCYESRDIDTAFEIPEKDKEINVLYKELKEKIRHDDSSYLVEHIFEIS SMLRNIERAGDHTKNICEHIIYMIKGQHYDFG >gi|312957683|gb|AENW01000003.1| GENE 120 119606 - 121294 2011 562 aa, chain - ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 21 544 14 536 543 398 41.0 1e-110 MLHIAASAMTPADISWDFIIGGLALFLFGIQFMGDGLKSIAGEKLREYIDRYTNKPWKGI LVGSIITVFIQSSSATSAIAIGFVRAGLMSLEQSIGIIIGANIGTTVTAFLIGLKVEALA LYFVFLGVLITLFAKRKKQTYMGQIVLGFGLLFFGLRLMGDELSKLGQMDFFTTLATTMQ NQPILGFISGTLMTAIVQSSSAVVGIIQKIYDSGAMTLTAALPFVFGSNIGTTVTAVFAS IGGSTSAKRAAAVNVLFNTIGSVIFMFLLTPYVDFIAFLSDKYSISPMMQIAIAHILRTI VISILAYPCINLMVSVIKKIIPGEEERIEVDLEGLDPKLAASLPAGALGVSKQVTVKMGE LASDCIRASQEYFNKKSGKYRGMSSQYEDAINSLDSKITEYLMTIAHNSLSEHDTDEFIN NLQIIKNIERVGDLTMNLNEFYELTYEDKGAFTDEAVGDVNEMYETVLEMNEIALNYFST REEHYIQMINDKENYLDLVEEKARQRHFKRMAGEVCGSGVAASIFVDILGTLERIGDHIW NIVKEGNEEAMTLDLRPNETDD >gi|312957683|gb|AENW01000003.1| GENE 121 121583 - 122050 430 155 aa, chain + ## HITS:1 COG:UU490 KEGG:ns NR:ns ## COG: UU490 COG0319 # Protein_GI_number: 13358053 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Ureaplasma urealyticum # 17 148 18 143 155 107 43.0 8e-24 MEISVFNQSGERRWSRYASDFRTISEKTQQVLKLEGLRSASVIFVTPQMIHEMNRDYRGI DRPTDVISFAMKDSEDAYEVMEGEEELGDIFINIEAISAQAADYGHSLRREVCFLFTHGL LHLLGYDHMTPEDEAVMFQLQDVILDDIVPKKIRK >gi|312957683|gb|AENW01000003.1| GENE 122 122019 - 122381 330 120 aa, chain + ## HITS:1 COG:lin1501 KEGG:ns NR:ns ## COG: lin1501 COG0818 # Protein_GI_number: 16800569 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Listeria innocua # 6 113 14 121 131 62 34.0 2e-10 MISFLKKYGNKFRYAFAGLMHGLLHDRSIVLQAVLGMVVLAVCACLGLEAMEWCVILIVI GAVIALEYINSALETIVDMVSPQYSEGAKKAKDYAAAAVLVMSLAAAAVGIVIIGGKLFL >gi|312957683|gb|AENW01000003.1| GENE 123 122378 - 122788 555 136 aa, chain + ## HITS:1 COG:BH1366 KEGG:ns NR:ns ## COG: BH1366 COG0295 # Protein_GI_number: 15613929 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Bacillus halodurans # 8 135 4 130 132 134 56.0 4e-32 MNVNEQYQELLDAAFAAMQHAYAPYSRYHVGACVKTKDGTLIPGANIENASFGLTNCAER SAIFAAYSMGYRREDIVAIAIVSDGTKLAAPCGACRQVLVELLQQDTPIVLSNKQEQKIT SIAELLPMSFTSEDVL >gi|312957683|gb|AENW01000003.1| GENE 124 122785 - 123684 957 299 aa, chain + ## HITS:1 COG:SA1396 KEGG:ns NR:ns ## COG: SA1396 COG1159 # Protein_GI_number: 15927147 # Func_class: R General function prediction only # Function: GTPase # Organism: Staphylococcus aureus N315 # 3 294 4 296 299 298 49.0 6e-81 MSYKSGFISIIGRPNAGKSTLLNAILQEKVAITTPKPQTTRNNISGILTREDAQFVFVDT PGIHKPKHELGRTLNRNAYTAIAEADVNYWMVDATQPFGSGDEFILEKMKSAQIPVFLIL NKIDLLDKEAVLTTLSKWQSRMQFAEIFPVSALKRENVEHLLEVTKSYLQEGVKYFPDDM ISDHGENFQIAEIIREKVLYKTNEEVPHSVAVIVEKKEESDTRMELSALIVVERSSQKSI LIGKQGAMIRGIRLAAQKELKEKFGKKVELELYVRVEKNWRNRSSKLHQLGYLELEEGK >gi|312957683|gb|AENW01000003.1| GENE 125 123684 - 124424 769 246 aa, chain + ## HITS:1 COG:BH1369 KEGG:ns NR:ns ## COG: BH1369 COG1381 # Protein_GI_number: 15613932 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Bacillus halodurans # 7 245 7 249 254 105 29.0 8e-23 MQEEVCGILVDVKEYREHDALLKVLCEDGSLLSLSARGVRKVTSKNAPAVQLFTLARLQL NYQQTASIQSLRRAEIINSYRKIREDLVKQSIASYFCECIYRSGFEENVYILLKQSLDIL QDAKHPLQILCLFQAVMNRMHGIEPFVDGCVRCQSTQHIQAVSRRDGGFICKSCLRYGDH VIPRRDLKTFRLLCKAELEHYELIERLEPFSSENFEELYGFFEDYGGIALKSVRFLRTLF AMEGHM >gi|312957683|gb|AENW01000003.1| GENE 126 124867 - 126249 1444 460 aa, chain + ## HITS:1 COG:CAC3195 KEGG:ns NR:ns ## COG: CAC3195 COG0423 # Protein_GI_number: 15896443 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 1 447 1 450 462 674 68.0 0 MNNEKLFDTVVAHAKNSGFVFQGSEIYGGLSNTWDFGPLGVELKENIKKAWWRKFIQESP YNTGIQSAILMNPAVWVASGHVGGFSDPLMDCKECKSRFRADQLIEDATNGEVSVEGWSN EAMMDYIEEHQLKCPKCGAHNFTDIRQFNLMFKTFQGVVEDAKSAIYLRPETAQGMFVNF KNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCQPGTDMEWYQYYK DYCMSFLTNLGINSDHLRFRDHTAEELAFYSKGTCDIEYNFHSQIGWGELWGIADRTDYD LKQHQEASKKSLEYLDPATNEKYLAYCVEPAVGVERLMLAFMCDAYDEEELENDTRIVMH LHPFLAPIKACVMPLSKKLSDKAMEVFQLIAPVGNCDYDEAGSIGKRYRRQDAVGTPFCI TVDFETENDNCVTVRHRDSMEQERVSLKDLSAYIEERIKL >gi|312957683|gb|AENW01000003.1| GENE 127 126270 - 128036 1824 588 aa, chain + ## HITS:1 COG:BH1375 KEGG:ns NR:ns ## COG: BH1375 COG0358 # Protein_GI_number: 15613938 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Bacillus halodurans # 3 473 4 491 599 244 32.0 5e-64 MARLSEQEISQIRAKADIVDVIGRYVPLTRKGKSYKCVCPFHDDHDPSMSIAADKQIYKC FVCGAGGNVFMFVQNYEKISFIEAVYKVAEYAGVTLEHTLDVTPRIKDPHLQALHKACRE AIEFTHYQLDTLDAKNVKEYLMRRNITEEIIKRFEIGYNPMDDALYRFLHAKKHADDDLV SAGLVRVTSLGMKDVFSHRIMIPIHDEFGEPVGFTARRVAENEEAKYINTTETDIYKKGN LIFNYHRAKQEARKAKKAYLVEGAMDVLALEKVELHNAVATLGTAMTKEQLRLLQLLHVP IVVCYDGDKAGRNATYKFGKMAREAQLPFEIVDNKYGLDPDEVIDVYGKDELRALLDKTI SWIDFLFEYLLGRYNLDNYSQKKEFAQEMALEIQALQDDFEKQSYFIRLRELTEFDMQVE QPKEERRAIHQPQPPRQSFLTFPKSGRSHAEHEILSQMLNGIAASNLFKEELGFLKDDTG NKLAMYIIDYYRTHTTLAVAELLDVIREEDVKALLLEITNWELAREDVDMAVLQEAIAKE KSCFLDDKIQLLNKKIRSVNDPMEKAKLAVEKNQLIKEREEWRSAGRK >gi|312957683|gb|AENW01000003.1| GENE 128 128041 - 129237 1642 398 aa, chain + ## HITS:1 COG:SA1390 KEGG:ns NR:ns ## COG: SA1390 COG0568 # Protein_GI_number: 15927141 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Staphylococcus aureus N315 # 6 396 9 368 368 397 61.0 1e-110 MKNTKKKAVLQEYKTLEDIKQEFLDEYKQNDVLYQKDVMDAVEHLAMTDTDFDDLFQWFS DNDIEVKNEDDDVDLMDDDALVATEDDDDIDFLDDDTDEEDTLAADIENLEQSFANSSHT KINDPVKMYLKEIGRVELLDPKEEPEIARRIQAGDEEAKKKLISANLRLVVSIAKKYVGR GMLFLDLIQEGNMGLVKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMV ETINKLTRIQRQLVQDLGRDPSAEEIAAKMENISPEKVREIQKIALEPVSLETPIGEEDD SHLGDFIEDKEALSPDEYANNQLLKDEINTVLQGLTEREEKVLRLRFGLYDGRTRTLEEV GKEFNVTRERIRQIEAKALRKLKHPTRSKRLKDFVDKP >gi|312957683|gb|AENW01000003.1| GENE 129 129237 - 129899 415 220 aa, chain + ## HITS:1 COG:SP1610 KEGG:ns NR:ns ## COG: SP1610 COG2384 # Protein_GI_number: 15901450 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 216 2 221 225 112 31.0 4e-25 MKLSTRLHTIFDMVQPCGVAADIGCDHGLLPIALIQSGKCEHVYACDVRKGPLSRAQEAI RQYGLQNSITTKLCDGLQGLEDDVEVVVIAGMGYDTICRILMKGDKQLKHYKQIILQCNT RVEDMRRWLHQNGFTIDAEQLVKDHHYYQMLSVHKEPSDMREDQYLFGVYLDRHPLFKEY WTYILEKQKIIIQHTQPHHDGYAAAVEKIKTIEKKLKELD >gi|312957683|gb|AENW01000003.1| GENE 130 130040 - 130552 534 170 aa, chain + ## HITS:1 COG:lin0387 KEGG:ns NR:ns ## COG: lin0387 COG0494 # Protein_GI_number: 16799464 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 1 141 1 143 169 74 32.0 7e-14 MELWDLYDAQRQPMNKLQMRGKPIPEGCYHIVVFIWTFTYDGRLLLTKRDACKPGGLLWE VTGGSVLHGETSQEGAKRELYEETGISCRVEQLQKLHTKVKGQGIYDHYLLQYPVELDKL QLQEKETIDAMLVDQSTFEDMMRVHILTHPLQLWYHELKDTLAVYFQKSR >gi|312957683|gb|AENW01000003.1| GENE 131 130751 - 131662 393 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 288 1 277 632 155 31 1e-36 MEVIKVVPRGYCKGVINAILIAKKTAQEHPDTPIYVLGMLVHNSYVMQALKELHIYPVDD KNKTRLELLDEIEEGIVIFTAHGISPAVKEKALRKGLQCVDASCPDVVKTQDIVMEQLKN GCDVLYIGKSRHPEAEAVLSLSEKVHLISTQQDLDTLPPLAQVFVTNQTTMSIFDIEALF EAIRERYPKAVFCEEICNATRIRQQAVADLKDKQIDVLYVVGDRYSNNSNRLAQIARDQG IHQVYLIDDVNDIQDEQICNAGRVAVTSGASTPTYLTAQVIAYLEDYAPGKCKPQIRLSE ILS >gi|312957683|gb|AENW01000003.1| GENE 132 131863 - 133227 1697 454 aa, chain + ## HITS:1 COG:lin1488 KEGG:ns NR:ns ## COG: lin1488 COG0513 # Protein_GI_number: 16800556 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Listeria innocua # 2 413 5 418 435 350 46.0 4e-96 MSKYTDYNFRETTKTFINLEGFKEPTPIQQAVIPLACKGRNIIGISDTGTGKTHSFLIPI MERVDSSLSVIQAVITAPTRELALQIYNRCEKMSEADPKLRIRLITGGMEKSRMNEQLKV QPHIVVGTPGRIKDLFLQEQTLRVDTADIMVVDEADMTLEFGFLEDVDAIAGKMKKNLQM MSFSATIPVALQQFLKKYMDNPSTVHIQEQSDFHPKIEHVLIPCQEKSYEEKLMELLATF TPYVCLIFANTRTQAASVAGMMRDAGYGIIELHGDLTPRERTKAMKDLVNIQKSYVVATD IAARGIDIEGISHVISLGFPKELDYYIHRSGRTGRAGRDGICYALYKKQDDAMIRSLEVK GVGFKHRNLKNGTWSELEPLHRKKVKKDDPLEKEISKIVSKKKKKVKPGYKVKRKQEVEK LKRKARRQMIQEDIQRQKKERAKQRVMEKRGGQE >gi|312957683|gb|AENW01000003.1| GENE 133 133224 - 134105 1207 293 aa, chain + ## HITS:1 COG:BS_yqfS KEGG:ns NR:ns ## COG: BS_yqfS COG0648 # Protein_GI_number: 16079568 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Bacillus subtilis # 1 289 2 294 297 329 56.0 3e-90 MKLGCHVSMSAPDYVLGSVKEAISYGANAFMLYTGAPQNTRRKAMHELKIEEAHSLMKEH GIDEGSMIVHAPYIINLANCVREETFALGVEFLQKEIARVQALHATVLVLHPGSHVKAGE EEGLKKIVEGLDLAMQDVQDVQISIETMAGKGSEIGYSFAHVRYLMDHAKYGDRLRVCLD TCHIHDAGYDLSDFDKVLDEFDAVIGLERLACMHINDSKNVQGARKDRHANIGFGEIGFE KLNAIVHNERVKDVVKILETPYVEDHPPYRQEIAMLRSGVFDEQIMEKIKGDI >gi|312957683|gb|AENW01000003.1| GENE 134 134107 - 134637 381 176 aa, chain + ## HITS:1 COG:no KEGG:Tlet_1813 NR:ns ## KEGG: Tlet_1813 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: T.lettingae # Pathway: not_defined # 1 172 1 177 182 109 29.0 5e-23 MEICELDIAAYRGKAIKVQYTTSYVYEAVVSQDAACFGVMFQRTALPKPLSCGFDDVWGS EWLKQPELYGVCVDGQIAGLLEICMENWTQRLRITNLFIEPAYRGRGCATCLLEHARQLA MQRDIRCVLLETQSCNDPAIQCYLRSGFVFLGCDLSVASNQDIQRKNVRIEMGCYL >gi|312957683|gb|AENW01000003.1| GENE 135 134944 - 136008 1215 354 aa, chain - ## HITS:1 COG:BS_yqfY KEGG:ns NR:ns ## COG: BS_yqfY COG0821 # Protein_GI_number: 16079562 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Bacillus subtilis # 3 353 9 359 377 397 55.0 1e-110 MKRTETRSIQVRDITIGGQNKVVIQSMCNTRTSDIEATVAQILQLEQVGCELVRMAIIDE ADAAAITEIRKRTHIPLVADIHYDYRLAIAAVKAGIDKIRLNPGNIGSKENVKAVVAVCK EYHIPIRIGINSGSLEKDIHEKYGRPTAEGMMESAQRHVQILEELDFHDICLSFKSSDPL LCIDAYRMASTAFPYPLHLGVTEAGTFIGSAIKSSMALGTLLNEGIGDTIRISVNGDPVN EITIVKQLLKCCGLLKNTPNLIACPTCGRTAWDMQPVVNEMEAFLQTINCDVNVAIMGCA VNGPGEAKHADIAIAGGRNEGLLIKKGEIIEKLPQEQMVARLKEEILAFEKEHS >gi|312957683|gb|AENW01000003.1| GENE 136 136151 - 138223 1935 690 aa, chain + ## HITS:1 COG:BS_pbpA KEGG:ns NR:ns ## COG: BS_pbpA COG0768 # Protein_GI_number: 16079555 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Bacillus subtilis # 34 690 21 684 716 327 34.0 6e-89 MIRNPFRDLDQKKLSRSSDVLKTQNDYFKIVNRRIFIFGIIICLIFAVVSVRLVFLQIRN QEDYAAKLENYSSQKQTDSTARGEMVDRNGKVIAKTVSSHNIVYFPPKDTTSEEQWKLAQ TFAKDFKVDHKGMTNSDYQDLYMFLHKDEKGNKDSGKNLLSEQEKETLTAEEQEKKIRSR ITMKMVNELADDDIKDAFSVYLSMRKLPNNQNKVILEDVDSDSVAKLMENKDKYRGFDVN LGSWKREYPYKDTLRDVLGSITTSKQGVPSELRSYYEAMGYSLTDRVGQSGLEKQYEDLL SGTPRVSEISYDSDGTAIMNETSSGKNGYDLHLTIDVELQKKVDDILEDTLKKYAGTAGR EKFKKAIVVLMNPQTGEIYAMSGKYLDEDGKIQNYSSGAYLDAFASGSVVKGATVYMMLD QGIQTRYSTEQDEQMKIAGTPFKQSFNTYGTVNSIRALAVSSNVYMFKSVIKLAGGNYVY NQPLGITNEMAQKTFKLMRNYYSMFGLGTKTGLDVPNEAQGFTGNTMNPGLLLDYSIGQY DNYTPIQLVQYAATIANGGKKVQPKLVNTATEVNTDYTVYENKTQVLSALPGSKEDLETI QMGFREVVAGEHAIDPIKSLDVQVAAKTGTAEVEDFTNASLVGYAPYDKEAKVAFACSVP ESATNDQSVAGNLCAYKIMPEVLKEFFKKY >gi|312957683|gb|AENW01000003.1| GENE 137 138277 - 138426 221 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237734635|ref|ZP_04565116.1| 50S ribosomal protein L33 [Mollicutes bacterium D7] # 1 49 1 49 49 89 73 9e-17 MRDRITFKCSECGEENYIGTRNKRKNPERMQIQKYCPRCNKKTLHKEKK >gi|312957683|gb|AENW01000003.1| GENE 138 138465 - 139076 670 203 aa, chain + ## HITS:1 COG:lin2270 KEGG:ns NR:ns ## COG: lin2270 COG0491 # Protein_GI_number: 16801334 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Listeria innocua # 1 201 1 204 205 139 34.0 4e-33 MKKMDTFVLGMVQVNTYLLWEENHVLIVDPGSKSHKLQETIDSQNGVVDAIVLTHGHFDH IAGVDALVKKYHCPVYINELDMAMLQDPMLNFSYQAPVVVNSPVTKLKPGKNSIGAFTLQ AIDAPGHSEGSTMLLWDDNLICGDVIFQGSIGRTDLPTGSNTKMMQTLRMIRETLPSKLK VYPGHGPDTTLDMEFRYNPYLQF >gi|312957683|gb|AENW01000003.1| GENE 139 139079 - 139543 435 154 aa, chain + ## HITS:1 COG:no KEGG:CLJ_B0675 NR:ns ## KEGG: CLJ_B0675 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: C.botulinum_Ba4 # Pathway: not_defined # 1 150 1 151 154 137 47.0 1e-31 MTIITATQSHIREILRLYEVLYADMARLQPFSYCRGMQDEEFLKTMIRLEDCDILLAVEN SCIFGLALVMKQLTPADSFVIPHAYATLMDLVVSREARGLGIGNRLLQEVEHWARERHLE YVELNVLQENRSAQRLYEKHGYMTAVKTMKKNLK >gi|312957683|gb|AENW01000003.1| GENE 140 139659 - 140654 1079 331 aa, chain + ## HITS:1 COG:BS_comGA KEGG:ns NR:ns ## COG: BS_comGA COG2804 # Protein_GI_number: 16079529 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Bacillus subtilis # 9 317 23 337 356 196 33.0 5e-50 MKEKFEQLLHMVERKRATDVHFTLMQHRLHVQVRGWNGLETVQNAAFDEGLFCYLKYISN LDLGNTLQPQSGNFQYEFRQELLYFRFSLLPTLEKQTAVLRVLNNHKEISLEDLSLDSKQ TASFLNWTKTRSGLIVLSGPTGSGKTTTLHAILKRIAQENRLHVVSLEDPIEIFDDSYLQ LQINEAGGFTYEEGIKELLRHDPDVIMIGEIRDPSTARMLLRCALSGHLIFTTIHAKCCS EAIKRLLEFGLRREELYHTLSAVCAQRLYKKKGTQERVCIYEILEQNELDAYFREEQLPQ QHRDIFQEIQLAVSKGIVAQEEAVIDLPYVQ >gi|312957683|gb|AENW01000003.1| GENE 141 140644 - 141597 993 317 aa, chain + ## HITS:1 COG:no KEGG:Hhal_0325 NR:ns ## KEGG: Hhal_0325 # Name: not_defined # Def: type II secretion system protein # Organism: H.halophila # Pathway: not_defined # 7 311 74 398 406 65 24.0 2e-09 MCNEEWRYLHDLLQNGYPYLEALQLLGKDTTRIREQLELGHSIEEILITQGTGRFFEHLS FFLKITSLSRAIDSSLQLYDFERNLLSRLLKKTAYPLSIFVFAYVMLLVFSTAIIPQMLQ SFDQGEDFQGLLLGVSLLQGGCRLIGVCALCLLAGALYLRNKPAIRNALILRSTRLCKLA SHVESYLFAGYMVELLKQGIPTRTALQYLEQIRKGSLFCELHKHLMNGLQNGEDILCVIE REVLLNDIFKQSFRIGSSTGSLCSMLQTGLQQQERTWERLLKRTAVTVQCIAYSFVGVVV LLVYQIMLIPLTMLEQM >gi|312957683|gb|AENW01000003.1| GENE 142 141620 - 141919 435 99 aa, chain + ## HITS:1 COG:lin1382 KEGG:ns NR:ns ## COG: lin1382 COG4537 # Protein_GI_number: 16800450 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGC # Organism: Listeria innocua # 2 93 9 99 107 74 46.0 4e-14 MKNNKGFTILEMMIVLSIIALVFLLTLPNIQQKEKIIRSKGCEALIEVANAQILLYEVEN LSPPKSMSDLISKGYLKDTQRRCPNGDTIEISNGQAAVR >gi|312957683|gb|AENW01000003.1| GENE 143 141933 - 142292 277 119 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|218282301|ref|ZP_03488597.1| ## NR: gi|218282301|ref|ZP_03488597.1| hypothetical protein EUBIFOR_01179 [Eubacterium biforme DSM 3989] # 1 116 14 125 130 68 32.0 1e-10 MEMLLVLLLLSVLLLVTPLLKRQQRILLRMDVQQIREICTKAQAQAIREHKSIPIKIQGS KVYCDREIYSLQSSTSCSSMSFHYTAQGTISKAFTLNCRSASSTVQLVAQLGSGRMDVR >gi|312957683|gb|AENW01000003.1| GENE 144 142282 - 142446 173 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFDKRGVVLMEALFLLMILGILALLCLQCAGMTHTMHDTGKGYDNDAVEEAYQK >gi|312957683|gb|AENW01000003.1| GENE 145 142415 - 142828 498 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915088|ref|ZP_02077301.1| ## NR: gi|160915088|ref|ZP_02077301.1| hypothetical protein EUBDOL_01096 [Eubacterium dolichum DSM 3991] # 10 135 2 127 130 102 43.0 6e-21 MMQWKKPIRNNGGFTLVEMLVAFSCVAVSCVLLMPVVSALQRLQEPVYYSEDRIAMYQLR FLLAQSSRLSLQENTLSFIYQKKKQTLEYDRRRLVRRSGYEIFLQDVDALQFQKRKECYY VTWVRKEKREEALLTCE >gi|312957683|gb|AENW01000003.1| GENE 146 142773 - 143258 410 161 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSHGFGKRSVKKHCLRVNEQGFISLYAMLLLLIFLCFVTLLVQRAAAYAAVRGLQESYDL FAIHNCRRYLQETLKPDADAEADMKERKGEESETGEEPQKEEQPKEWEVLFRNTYFHFTK EEEHIAVTYTQKSNTVHMQIFFDRTDGTIQDVVYLQQCEPH >gi|312957683|gb|AENW01000003.1| GENE 147 143275 - 143604 616 109 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTIGLSTLLFLAFAGLGNLLLIMNETAYMLVPLYAVLLLFGRLFYREANCKALEGKDFL LTLVIVLLFLGYFEWRQELFDFTTFWYLYLTTFIAFMLYADSIRFKSLM >gi|312957683|gb|AENW01000003.1| GENE 148 143701 - 144264 667 187 aa, chain + ## HITS:1 COG:SA1359 KEGG:ns NR:ns ## COG: SA1359 COG0231 # Protein_GI_number: 15927109 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Staphylococcus aureus N315 # 1 185 1 185 185 168 45.0 4e-42 MISSNDLKPGMTIQQDGEIFVVLEQSQNKTARSAMVVKAKVRNLRTGSNVELSWGGGDKI TPAHIEKKEMQYLYDTDDALVFMDNETYEQIEIPKDRLKWEMNFMKPNDNVNISMFESEI LGVILPDKVALQIVECEPAVKGDTATSASKNATLESGLEIKVPLFINQDEMVLVNTSDGK YSGRAKD >gi|312957683|gb|AENW01000003.1| GENE 149 144387 - 145361 1023 324 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400645|ref|ZP_06644790.1| ## NR: gi|293400645|ref|ZP_06644790.1| hypothetical protein HMPREF0863_00930 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 323 1 309 312 232 55.0 3e-59 MEKLSRVKKYAELRKSIETDNNIDKTLHTEENGALEQEETLKKFDSSIFKKVDIKEDGEY TPVREKKEEPLEQPPVDDTFTNEYLDDFIKEVREYNIRKGTRESDNTQADILYQLNAANR AKRSHYIQEIQEEPQPEEPKKTVLSRDDIALQVQNLLKEEEAPLPESDMRFTKEPVETPA YRAEAEDVEYEEPVLEEAPVVESFQPQPAAVEAVEEYAPQPEQRPQRPAKKIIQPAMMED AFEDEDEIPVKKDAPQQAVLHKKLLEETQQLRVQMDEYEDELTDLSDGVEKTNKLLNFVL CFLILVLLVIIGFIAYSLWKAGGI >gi|312957683|gb|AENW01000003.1| GENE 150 145364 - 146020 258 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 5 212 37 281 863 103 30 4e-21 MKINIAIDGPSAAGKSTIAKILAKELGYSHLDTGAMYRCTALASKKRGIDPNDEAALTAM LDEMKISFDPAGNVYLNNEDVSKQIRENEISMLTSSISAHPKVRERLVALQQQMARDKGF IMDGRDIGTVVLPDAELKIYMVASVKARADRRYKEYLGKHVEADYDEIYRDIEQRDYQDM NRKTSPLRKAEDAIEIDTSNMTITEVVEEIRRNIPTLS >gi|312957683|gb|AENW01000003.1| GENE 151 146056 - 147366 1614 436 aa, chain + ## HITS:1 COG:BS_yphC KEGG:ns NR:ns ## COG: BS_yphC COG1160 # Protein_GI_number: 16079341 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus subtilis # 5 434 5 435 436 569 64.0 1e-162 MINGIVAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTGG IQLANQDFQTEINMQVEIAIDEADCIVFVVSGKDGLTHDDEYVARLLHKTKKPVILAVNK VDDFAQNDAIYEFYSLGLGDPLAVSGAHGIGIGDVLDAVIHALPEKEKNEYDGMTKFCVI GRPNVGKSSLVNAILNQERVIVSNIEGTTRDAIDTPFKREGKEYVVIDTAGIRKRGKVYE NIEKYSVLRAMSAIERSDVVLVVIDGEKGIRDQDKHVAGYAHEAGKGVVIVYNKWDAVEK DEQTMHTIEKEIRAQFLYLSYAPVLFVSALKKQRIHTILPVIDEVHDYSVLRIQTNVLNE VIMDAQLMTPPPTHKGQRLKIYYASQVSVAPPTFVLFVNDPELLHFSYKRYLENRLREAF GFTGTTLRILARERNR >gi|312957683|gb|AENW01000003.1| GENE 152 147372 - 148370 1147 332 aa, chain + ## HITS:1 COG:lin2050 KEGG:ns NR:ns ## COG: lin2050 COG0240 # Protein_GI_number: 16801116 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Listeria innocua # 2 330 5 334 338 296 48.0 3e-80 MKTVVIGSGSWGTALAQVLVDNAREVVLWGKNPKEIDDINLRHQNTRFFPDVTLHESLKA TCDLNVVRDADLLVLSVPTIAVEELCIKIGALVEKPVIVVNTSKGFHPQTNERMSNVIRR FMPKDKLKSVVSLIGPSHAEEVVLRMLTTICAVSLCEEDACSVQELFSNEYLRVYRGDDE VGSEIGVALKNAIAVASGVLSGVGYGDNTKAALITRGLAEMIRYGVALGGRAETFMGLTG IGDLIVTCTSVHSRNFQAGYEIGTHNSARYFWENNTKTVEGVRTAKVVYEVAKQKQIDMP IVEEIYRVLYEDKKPQQSARDLMLRDLKHEMK >gi|312957683|gb|AENW01000003.1| GENE 153 148546 - 150138 2002 530 aa, chain + ## HITS:1 COG:CAC0630 KEGG:ns NR:ns ## COG: CAC0630 COG4108 # Protein_GI_number: 15893918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Clostridium acetobutylicum # 1 526 1 524 526 758 69.0 0 MTNYVNEIQRRRTFAIISHPDAGKTTLTEKLLLYGGAILSAGSVKGKKANKHAVSDWMEI EKQRGISVTSSVLQFEYNDFCINILDTPGHQDFSEDTYRTLMAADSAVMVIDASKGVEAQ TKKLFKVCLLRKIPVFTFINKMDRAAMNPFELLEHIESELGIATYAMNWPIGSGKEFKGV YERDHHRIIAFHGGDHGQKAAEVSEGTLEDETFRGVLGDHFFEQLREDSELLDIASTEFD QELISKGELTPVFFGSALTNFGVEPFLSHFLDMTTSPLPRESSQGEINPMDERFSAFVFK IQANMNKAHRDRIAFMRICSGRFEKGMEVMHMQQNRKIKLSQPQQFMAQDREIVEEAYAG DVIGVFDPGIFSIGDTLCDPSMKFEFKKIPTFAPEHFARVTQKDTMKRKQFTKGITQIAQ EGAIQVFQEINIGMEEIIVGGVGVLQFEVLEQRLKSEYNVDIKLEILPFQCVRWIDDQAL DPNTLNLTSDSKRVRDLKGRNLIIFMNNWGIKWALEQNKGLTLSDVGTAE >gi|312957683|gb|AENW01000003.1| GENE 154 150296 - 150478 290 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400640|ref|ZP_06644785.1| ## NR: gi|293400640|ref|ZP_06644785.1| putative assimilatory nitrate reductase electron transfer subunit [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 57 1 57 61 67 68.0 3e-10 MHDEDIVCTCMSVSVRDIKTAIEAGASSFQEVQDATGAGTVCGACNDVLESVVEQLLRNR >gi|312957683|gb|AENW01000003.1| GENE 155 150572 - 152050 1824 492 aa, chain + ## HITS:1 COG:no KEGG:BPUM_2011 NR:ns ## KEGG: BPUM_2011 # Name: spoIVA # Def: spore cortex-coat assembly protein # Organism: B.pumilus # Pathway: not_defined # 1 492 1 492 492 589 56.0 1e-166 MNTTEILKNIAQRCGGDIYLGIVGPVRVGKSTFIKEFMEKAVIPYVSDEFEKSRMIDELP QAGVGKTIMTTEPKFVPNNAATIEFDDGFTVNVRLVDCVGYVIPEAKGYKDEDGIRMVRT PWNDEPVPFNEAAKTGTQKVIQDHSTIGIVVTTDGTISDLSREAYIEAEAEVIDELKSIG KPFIVVVNSADVHSPACKAVVDKLKEKYEVPVLAIAVNHMSEENVHDILREALYEFPVSE ININMPQWIAVLSDDHWLKKSFHDTIQESMSSVDRLREVENITDVLNENEYIDGSNLATI DTGQGIVNVDITVKPGLYNEILKEIIGHEIKDKAELISLMQDYSKAKREYDAVESALKMV KQTGYGFASASLQDIQLSKPEVVKQGSRYGVKLKAIAPSIHMIKVDVESTFEPIIGSKEQ SEELIRYLLRDDGNDDQSIWDSDIFGRKLSDLIRDGLNAKLSMIPEAARARLQDILTKLV NKGKGNVIAIVL >gi|312957683|gb|AENW01000003.1| GENE 156 152170 - 152454 367 94 aa, chain + ## HITS:1 COG:BH3356 KEGG:ns NR:ns ## COG: BH3356 COG0776 # Protein_GI_number: 15615918 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus halodurans # 5 94 1 90 90 82 54.0 2e-16 MSEILNKKALVEVVAEKLEMTKKDATVAVETVFDEIAKTLSEGGKVDISGFGKFEISERP ARMGINPATKEPLEIAASKAPKFKAAKALKEAVK >gi|312957683|gb|AENW01000003.1| GENE 157 152627 - 153331 907 234 aa, chain + ## HITS:1 COG:BH1677 KEGG:ns NR:ns ## COG: BH1677 COG2738 # Protein_GI_number: 15614240 # Func_class: R General function prediction only # Function: Predicted Zn-dependent protease # Organism: Bacillus halodurans # 13 233 3 224 224 172 42.0 5e-43 MFNNSYMSQYFLYILAFAVVMLAQSRVQAAYQKYKRIPNEHGLTGEAVARRILDMNNLQS IRVEVAKGGMLSDHYDPVHHVVRLSPDIFYNASIASISVAAHEVGHAIQHKEHYGAIGLR NRLLPMANIASQLGWVVLVLGLFLFASTPVILYAGIAMICIILLFQIVTLPVEFNASSRA VKQLAMYGMISEQERYDVKGMLRAAAFTYVAAVLSTLAQILRILLMVLGRRDDD >gi|312957683|gb|AENW01000003.1| GENE 158 153609 - 154811 806 400 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|166032501|ref|ZP_02235330.1| ## NR: gi|166032501|ref|ZP_02235330.1| hypothetical protein DORFOR_02216 [Dorea formicigenerans ATCC 27755] # 6 117 10 122 371 67 30.0 2e-09 MVKKCLLILLVLLCMSACTSKEEKQELDREKQQGTANALLYMKDKYGIQPTVKETHLGYG DASPIPRLKRKQDGTAWVEMMYQERSFTVNVYTEENNQDGSDDYQMPELQEAYRKRIEAS LKLDTDLHISAFDVFFQYKGAWYQNVFPKEIKYDGGDIDAFMKDMYSKTLLYTVDEPEPK TLQHRKDLNRTNLILLNFTSKNGESDFLHELAKNEISFIDNLSDDGIFIYRDLQKKFAKD LKDSILITNGEEYHTDYTPRFVGEICYYTFDQYGRDTNDTVNIYKGKANPADFRDMKKNY EIHAFSEALTIEKASDSTVLYMPQEDFIKEIPPSQEDTYVVLWQSFINRGGKQESGEFFN TSSTKISEYRDEEGRYYKKIVPAETSITLCYAEVSTRKTE >gi|312957683|gb|AENW01000003.1| GENE 159 154898 - 155203 327 101 aa, chain + ## HITS:1 COG:no KEGG:Mhun_0153 NR:ns ## KEGG: Mhun_0153 # Name: not_defined # Def: hypothetical protein # Organism: M.hungatei # Pathway: not_defined # 10 99 7 96 104 65 40.0 7e-10 MEAVKTRTMSVCGVQCDACEHYPDICLGCKALEGKPYWLQYVEDRNVCDIYECCKKSKKL KHCGHCHELPCILYEAQDPTKSEEDNQKDFLMQMKNLTEAQ >gi|312957683|gb|AENW01000003.1| GENE 160 155340 - 155741 323 133 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSFLKNYVPYGCMCFTAILLINACSAFLHNTPLILDAASLLRDFGICMLLIIADYGINE YMEFKTYRSFVITEFLILTGIFLILNNAGHLDTLQVRSIISQILSMAVILGAIRLYIAYS FRKEIDDLNEHLK >gi|312957683|gb|AENW01000003.1| GENE 161 155752 - 156192 420 146 aa, chain - ## HITS:1 COG:no KEGG:Elen_0703 NR:ns ## KEGG: Elen_0703 # Name: not_defined # Def: response regulator receiver protein # Organism: E.lenta # Pathway: not_defined # 1 142 1 142 145 78 30.0 8e-14 MKLTILQDDAIAEDEIIIKTATRHPRLERLIDLIKQYSITLKAYHNNREYYLPIETIYYI ESVDGITYLITEKDSLLCRMSLREIEDSVQHTSFCRISKHMIVNTAHLKAVESYANHRLL LVLKDDDKVLVNRNYVEHLKKQTKKL >gi|312957683|gb|AENW01000003.1| GENE 162 156483 - 156842 509 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGKERYKREIAMLFPYMSKKEKMFLNNYMQNIEDAEYKDIVKEWGAPIAVVHSYIEAQD TEIIMKKLNRRKLLKTFLSAVLFLMTATLAIYTYFLNKSYQAVRDTVPNEIKETLIIEE >gi|312957683|gb|AENW01000003.1| GENE 163 156847 - 157167 402 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224543709|ref|ZP_03684248.1| ## NR: gi|224543709|ref|ZP_03684248.1| hypothetical protein CATMIT_02922 [Catenibacterium mitsuokai DSM 15897] # 1 105 1 105 109 92 40.0 9e-18 MAKEHNFFKMEMLILLILKQGNCYGYELAGILKKQTEGIIDIKMGTLYPILYKLADDHCI TGMEVREGRRTKIIYKLEPKGEALLVTLQKRYTVWVQAIDMIMKGA >gi|312957683|gb|AENW01000003.1| GENE 164 157508 - 158248 817 246 aa, chain - ## HITS:1 COG:CAC0961 KEGG:ns NR:ns ## COG: CAC0961 COG3442 # Protein_GI_number: 15894248 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Clostridium acetobutylicum # 1 242 1 238 243 180 42.0 2e-45 MELNVCWMYHDIMDLYGDKGNMMVLQKRCEERGISITIDTLSIGDQRDLRVYDLLFLGGG ADKEQMMLIDDLLSRRENIREAMEQGTFVLLICGGYQLFGQYYISADNEKIEGLKFFDYY TTTGSNGTRCIGNIAIRCNLDGHEITAVGFENHGGQTCNVATPLGKVISGYGNSFDSGYE GFYNGSVLGTYMHGPLFPKNPEIVDFVIYKSLKKNHPDVQLEDLIQLDDTLEQKAKEAML KRLQVQ >gi|312957683|gb|AENW01000003.1| GENE 165 158250 - 159584 1193 444 aa, chain - ## HITS:1 COG:SA1708 KEGG:ns NR:ns ## COG: SA1708 COG0769 # Protein_GI_number: 15927466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Staphylococcus aureus N315 # 5 428 6 424 437 240 34.0 5e-63 MTTFAILITKLAGAMLQLIHRGGSLPGQIGLKLCPDILKKLRIDCPLILVTGTNGKTSTS NMIAAMLEQEGRIVVNNRKGDNLKEGITTALLMHTTLRKRVQGNAIVLEVDELNIPFIMK NLKADALVVTNFFRDQLDRAREMEQLIVKMEQAISDFEGTLILNGNDPNVVRLHDAAPKA SMLAFGMERCSFSSETTGEASEGKFCPRCGKRLEYAFYQYSHIGVFHCSGCDFQTPNLDA AGVVESIPKRSFRYEGIAFSAPQGGLYTMYNCMAVLAVAKLLKVDTRHAAAAFTHIKVPD GRNEAFTYKNHTCVLNLVKNPTGANEVMKVIEEDETEKSILIVLNDNAQDGTDVSWIYDT FFEKLMKNNTKRIIVTGSRCYDMALRLKYGGYTGALEVQEQMKEAVTALLKSNETMYAIA TYTALQPVRNLLLTQGVQERKGGA >gi|312957683|gb|AENW01000003.1| GENE 166 159905 - 160612 905 235 aa, chain + ## HITS:1 COG:CAC1391 KEGG:ns NR:ns ## COG: CAC1391 COG0152 # Protein_GI_number: 15894670 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Clostridium acetobutylicum # 1 232 1 232 235 267 59.0 1e-71 MKELEMLYEGKAKKVFATENPDQVIVDYKDDATAFNGQKKGTILGKGVVNNKMTNFLFKK LEDKGIPTHLIEELDDRRTLVKKVEIVPLEVIIRNKVAGSFAKRMGLKEGMELKCPILEF SYKDDDLGDPMINDYMALAVGISTQEEIDEITRLAFAVNEELKSIFAAVDIELIDFKLEF GRFKGGIVLADEISPDTCRFWDIHTHDHLDKDRFRRNLGNVEDAYQEVYRRLGIK >gi|312957683|gb|AENW01000003.1| GENE 167 160651 - 162081 1757 476 aa, chain + ## HITS:1 COG:CAC1821 KEGG:ns NR:ns ## COG: CAC1821 COG0015 # Protein_GI_number: 15895097 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Clostridium acetobutylicum # 1 476 1 476 476 636 63.0 0 MNDRYISPLGQRYASEEMQRIFSNDKKFRTWRRLWIALAESEKELGLAITQEQIDELKAH AEDINYDVAREREKIVRHDVMSHVYAYGQQCPNAKGIIHLGATSCFVGDNTDLIVMYEAL ELVKKKLVNVLAELKKFALDYKDLPVLAFTHFQPAQPTTLGKRAAIWAQDLLLDYEELCF LLENKKLRGCKGTTGTQASFMELFDNDEAKVKQLDQMVAHRMGYEKSFAVSTQTYSRKVD SRILNALGSIAQSAHKFSNDIRLLQNLKEVEEPFEKGQIGSSAMAYKRNPMRSERMASLA NYVIADTLNPAITAATQWFERTLDDSANKRISIPEAFLAVDGILDLYLNITDGLVVYPKV IESHLMKELPFMATEMILMDAVKAGGDRQELHERIRVHSMAAGKVVKEEGLENDLLKRIA EDAMFPMNMEQLKAIMSPINFVGRAPSQTVEFFEECIDPVLETEKEALGLHAEINV >gi|312957683|gb|AENW01000003.1| GENE 168 162184 - 163785 1828 533 aa, chain - ## HITS:1 COG:lin2704 KEGG:ns NR:ns ## COG: lin2704 COG0504 # Protein_GI_number: 16801765 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Listeria innocua # 1 532 1 532 532 666 57.0 0 MSKFIFVSGGVVSGLGKGISAASLGRLLKARGLKVSAMKLDPYINIDPGTMSPYQHGEVF VTEDGSETDLDLGHYERFIDENLNRYSNVTTGKVYWNVLNKEREGKYLGETVQVIPHITN EIKDFIYKAQEESGADIMICEIGGTTGDIESLPFLEAIRQVAQDKGRENCLFLHVTLIPY LESSGEHKSKPAQHSVNQLQSYGIFPDIIIARCSRPLEEGIRDKLSLFCNIPKECVFENR TMPSLYEVPYMLQKQGLDDVVCRKFHIDAPQADLRSWSMLMEHAGDVTETVTIALIGKYV RLHDAYLSVVEALYHAGLKNNIKVHIKWIDSENITEGSIRELLQDCSGILIPGGFGTRGI EGKIRAATYAREHNIPYLGICLGMQIAAIAFARSVLGYSDANSYEFHPESSHLIIHYMAD QSDEQDMGGTMRLGAYPSRIKEGTQLYRAYRTTEISERHRHRYEFNNQFREEFIQNGMDI TATSQDGSLVEAVECVNNDFYVGVQFHPEFKSRPNRPHPLFTDFIAYSKANRK >gi|312957683|gb|AENW01000003.1| GENE 169 163887 - 164459 628 190 aa, chain - ## HITS:1 COG:no KEGG:Cthe_0203 NR:ns ## KEGG: Cthe_0203 # Name: not_defined # Def: response regulator receiver/ANTAR domain-containing protein # Organism: C.thermocellum # Pathway: not_defined # 1 188 1 189 190 131 37.0 2e-29 MLHVLLVSTSEKTTGILKEYLNMEDCMNITACKTASRARRTALETAFDMIIINYPLADER EYELPQDLAEKSDASIMLMVPAEVYDIIADRMEKAGIYVLLKPVNKTVLLCVLRFAIVTQ KRIRAMRMRNRSLKDRLSEIKVIDRAKCLLMEHEQLSEAQAHRYLEKRAMDSQMSRLQVA EQLLKKYQLP >gi|312957683|gb|AENW01000003.1| GENE 170 164476 - 165732 1231 418 aa, chain - ## HITS:1 COG:MA4216 KEGG:ns NR:ns ## COG: MA4216 COG0174 # Protein_GI_number: 20093006 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Methanosarcina acetivorans str.C2A # 3 412 8 424 447 316 41.0 6e-86 MVTSEREIMEFIEEYDVKFIRLAFFDLFGNQKNISIMPRELKQVFAHGLSFDASAVSGFS QESQFTEEHTSDLFLFPDISTLTILPWRPQIGRVVRMYCEIRYPDGSAYALDTRSLLNRM RKQVGGKGMQIMAGTECEFYLFERDENGKPTTIPYDEARYCDIAPLDKGENVRREICLDL EEMGIHPESSHHEQGPGQNEIDFRFDEVMPCADNLMTFRNVVDMVALSSGLKANFHPKPL QQQPGNGLHINLSLFRNGENLFAQEQGRYMEAFLSGILRRIREITLFLNPETESYLRLGE DKAPKYICYSRSNRSALIRIPAANEHHTRIEVRSPDPSCNPYLALTLLIAAGMEGIEDGL TAKEFHGNVYLHHEGLQELPSSLQEALQLAQNSSFTKRVLGEELLQGFLNAKIKQLRM >gi|312957683|gb|AENW01000003.1| GENE 171 165879 - 167180 1641 433 aa, chain - ## HITS:1 COG:FN1605 KEGG:ns NR:ns ## COG: FN1605 COG0104 # Protein_GI_number: 19704926 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Fusobacterium nucleatum # 1 431 1 425 425 515 55.0 1e-146 MPGYVVVGTQWGDEGKGKVVDYLGSRMDAVVRFQGGNNAGHTVVVQDKHTGQNQQVVLHL LPSGVLQKASCIIGPGVVVDPFVFLEEINQLEERGFNTDHVLLSDCSHIIMPYHVRLDAL IEASLKDHKIGTTKRGIGPCYADKYSRQGLRIGDLQDFESFKKKLKLAVDMKNITFQKVY EDPGFSYEELVAQFAQIRKALLPRIINAQIVINQALDAQKQVLFEGAQAAMLDINYGNYP YVTSSSPTSAGVCTGAGVSPKKLDVIIGIAKAYSTRVGEGPFVSELFDDMGAWLREQGHE FGATTGRPRRCGWLDVNVVRHAAMINGLSDLVITKLDILSGLKKIRMCVAYDIDGVRYDY IPSSMEELQRAKPIYEEFDGWQEDISTMKTYEELPENCKIYLRRIEELCNTRISMISVGP ERNCNIYLHEMLK >gi|312957683|gb|AENW01000003.1| GENE 172 167447 - 168283 1030 278 aa, chain - ## HITS:1 COG:FN2098 KEGG:ns NR:ns ## COG: FN2098 COG0489 # Protein_GI_number: 19705388 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Fusobacterium nucleatum # 30 276 15 254 257 256 51.0 4e-68 MSNCNSCPSKGTCGKQADSCGIQNNERNKIRHVIGVMSGKGGVGKSSMSVLMAKEMARRG FRVGIMDADITGPSIPRLMGLEHAQAFGTNDAIEPVVDKDGIKVMSLNFLMEDENQPVVW RGPIVANAVKQFWTDVVWEELDYLFIDMPPGTGDVALTVLQSLPVSGVIMVSTPQPMVSM IVSKAINMCKQVKVEVLGIIENMSYVVCPDCGKRIEIFQHRNVEDFVRENEVPLWAELPM MDSISRIYKDDDFDTETAQQMYAWISPAADQLIEKMGK >gi|312957683|gb|AENW01000003.1| GENE 173 168596 - 169519 1010 307 aa, chain - ## HITS:1 COG:lin2069 KEGG:ns NR:ns ## COG: lin2069 COG4974 # Protein_GI_number: 16801135 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Listeria innocua # 3 302 1 297 297 193 38.0 3e-49 MNLQEALQDYLHYIQAVDQKSLATIHSYTQDLQEYLSWLQMQGKTEMEDILPRDIQSFLS DMEQGDIQEDGLCYKRSSVNHMLSSIHMFHRFISMNHPSILDPSIHLRGGKKEQKLPLYF NPHDIELLLDSFGQDAQGLYQKAILELLYGCGLRVSEVCELRINQVHLEQGYLRVIGKGD KERMVPMHERCMRVLRTYLTQIRPTWEKRKSTRVFLNSRGNVLTRQYVHTLIKQRLQALG LDERLSAHSFRHSFATHLLDGGADLRVVQELLGHSDIATTQIYTHVQNRRLKEAIDQYHP RSVKKEK >gi|312957683|gb|AENW01000003.1| GENE 174 169516 - 170178 571 220 aa, chain - ## HITS:1 COG:SP1536 KEGG:ns NR:ns ## COG: SP1536 COG4123 # Protein_GI_number: 15901380 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 12 218 19 230 249 134 36.0 1e-31 MEDYTYDYINGTDIYLYQHKKMFRINTDTALLAQFMKVKKGERVLDIGTNNGALLLAAHR YAPSYLYGIDIQPEAIAVAEKNMEHHHITNVVLMAQDICDAALEKVDVIVCNPPYFKVDQ ESNLNESQSLQMARHERFLTLRTLCQRVSELLDEKGRFYMVHRASRISEIAYTLKQHRLE IRTLQFVYDANREEAVSVLVEAVKDGRVNAHVLLPQIIER >gi|312957683|gb|AENW01000003.1| GENE 175 170216 - 170839 833 207 aa, chain - ## HITS:1 COG:no KEGG:BMQ_4400 NR:ns ## KEGG: BMQ_4400 # Name: spoIIM # Def: stage II sporulation protein M # Organism: B.megaterium_QM_B1551 # Pathway: not_defined # 2 157 3 160 214 62 27.0 7e-09 MKKNIPLKKRQGYHGFLKKYHNVYLFIAILVGCGILMGIIVSNYIDVSDIKSLSSYLTTI DSGVDKYDYFVSQFFSGIVFILFVFLLGTSLIGIPIISFIAFTKGMQIGFSCALFVYTYH LKGIAGIIMTLLPQVAMDLIATFLISASAIQLSMYIIYSTTNRERLNFKQLGNNVLNDIF ICFVIILAGSYLKSTLVIEFIKLFNLM >gi|312957683|gb|AENW01000003.1| GENE 176 170934 - 172115 1407 393 aa, chain - ## HITS:1 COG:BS_yqjH KEGG:ns NR:ns ## COG: BS_yqjH COG0389 # Protein_GI_number: 16079444 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Bacillus subtilis # 4 382 6 386 414 276 42.0 5e-74 MAGRVILHIDLNSYFASAEILKNSALEGQPVVVAGLHRRSVVSTASYEARKYGVHSAMPL HMAMEKCPNLVVVQGDYGWYEELSNRFFKYLRRFSSLIEPASIDECYMDVTDVIKDYKRP LDLAWQIQKSVQKDLKLPCSIGVAPNKFLAKMASDMRKPMGITILRKQEVPKKLWPLPIS DMWGIGKKTVPLLIKHGITTIGDLADAENESKIMTLLGKHAYTYIQNARGNGSAQLSFNT SVQSISQSTTLDRDITDYEEVKTVLKRLAATLSRRAREDHIKGSLISISIRYFDFTNAVR STNIHSYTDDANVLLEHALLLFDRHYNGREIRHLGIGLGSLYSAEHTIDQIDLFQHEIQP LNDVEDVLKELNAQLPGAHLIRASDIHASKGQK >gi|312957683|gb|AENW01000003.1| GENE 177 172168 - 173001 1071 277 aa, chain - ## HITS:1 COG:BS_spo0A_1 KEGG:ns NR:ns ## COG: BS_spo0A_1 COG0784 # Protein_GI_number: 16079478 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus subtilis # 4 115 3 115 120 69 32.0 6e-12 MNNKMNVYLVDDSMEMIHSMKEALTKSDGYQVIGSATNGEQCVNELRGKHLDVLVLDLIM PKKDGISVLHDLKKNHIQVDHIICTTPFVNDLIVAGVQNYRIDYILMKPFEIEQLCDKLN FIVGYTRKEHISSNVVKVNLDDDEKERLQKLELESEITELLHEIGIPAHIKGYMYLRTAI LETYLNVDFLGQITKVLYPEIAKKYATTASRVERAIRHAIEVAWNRGNIDAIDDIFGYTI SASKAKPTNSEFIAMISDKLRLEHRLRNKNNVIKTFR >gi|312957683|gb|AENW01000003.1| GENE 178 173186 - 174187 857 333 aa, chain - ## HITS:1 COG:BH2775 KEGG:ns NR:ns ## COG: BH2775 COG0750 # Protein_GI_number: 15615338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Bacillus halodurans # 29 329 118 425 437 197 37.0 2e-50 MYKKIVAFLCALSLLLPIGIHASDDLYLGGDSIGIQLDYNGVMITGTYPFVVQGETYDPG GTIQPSDILVKVNQVPISSMDELYQQLSAFQESVNEIPVEIRRGSNTIPVTLKTTYDAST RSFKSGLYVKDKIVGVGTLTYYDPSNNTYGALGHEIMDSDLKQIAEVPSGSLYPANVISI TKAQDNIPGEKHAEIDFSSAFANVLANTNIGIYGHYDSMLRNVEALPWAKHDEVHTGKAV MYTVLQGNTIEPFTINITKVHRQNTSDVKGIEFTIADERLASASNGIVQGMSGSPIVQDG KIIGAVTHVITSHPSNGYGVFVEWMLEKSRNMA >gi|312957683|gb|AENW01000003.1| GENE 179 174239 - 175900 1979 553 aa, chain - ## HITS:1 COG:BH2776 KEGG:ns NR:ns ## COG: BH2776 COG0497 # Protein_GI_number: 15615339 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Bacillus halodurans # 1 546 1 558 565 303 35.0 5e-82 MLTQIYVKNFILMDEVQLELHDNMSAFTGETGAGKSLLMDAIGILKGDRVNSDMIKEGCD KAVIEGVFELAPQHSVLQQLQDAGHECEDGLLIVTREVTREGRSIARINQRTTTVSFVKQ IVSQLVDIHSQHDTQYLRNAASHQLLLDRFARDEDLLAKTKQSYHSYRSMKDALEEALHS DYNEDDLEFLTFQLNEIDEAQLQEEELEALEQEQKRMMAYEKLSSSASQAVALLDEGSVS SIYESYRLLHALHEDETFTDAAAQLLDLYYALDEQCSRVRTHLEELEFDEGRFHELQERI FLIHKIQRKYGGSYAAVMEKRSFLEKKIDSILHRQDFIAKSEKELEKARKVYEEDCMQLH VLREKKARELEQLILQQLKDLQLPNARFHVELEPFEGNAQGSDKITFLVSMNAGERLRPL QATASGGELSRFMLGLKTVFTRLTGIDTIIFDEIDTGVSGSVAFSIGKKMRQLAQRTQVF CVTHLASVAACAMQHYVVEKHQEGGHTETTIRLLNDKERIQEMAVISQGSTSESALQAAK ELYELAKKETGNN >gi|312957683|gb|AENW01000003.1| GENE 180 175905 - 176684 795 259 aa, chain - ## HITS:1 COG:SPy1497 KEGG:ns NR:ns ## COG: SPy1497 COG1189 # Protein_GI_number: 15675401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Streptococcus pyogenes M1 GAS # 2 242 5 249 275 191 42.0 1e-48 MRLDVYLSTQGLCDSRARAQDAIQEGRVTVNGRIAKKSSMPVDDSMDIKLEEAETAFASR AGYKLYDVLKPFEIDLEGRVVLDVGASTGGFSDVCLQNKARLVYAVDVGKDQLLERLKND PRIINMEGVNCRYLSGDMFDPRPDFACMDVSFISIRQILPVLAEQFADMEIVALVKPQFE AGRAKVGKHGIVKNEKVHIEVLQSMCDYVKTLGLYVHHLCASSVLGRDGNKEFVMHLKHT QTHKVFPIRDIVKNYTVKR >gi|312957683|gb|AENW01000003.1| GENE 181 176681 - 178558 2231 625 aa, chain - ## HITS:1 COG:lin1402 KEGG:ns NR:ns ## COG: lin1402 COG1154 # Protein_GI_number: 16800470 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Listeria innocua # 1 599 6 607 632 605 50.0 1e-173 MNIYDIKQPEDIKECSIAQLQDLAQQIRVFLIQSIAKTGGHLSSNLGVVELTLAMHYVFD SPTDKFIFDVGHQSYVHKILTGRGNQFATLRQYKGIAGFQKRKESEHDVWEAGHSSTSLS AALGMAVGRDLHKDTYQIVPVIGDGALSGGMAMEALNQIGSEQRNMVIIFNDNNMSISQN VGAMDEAFTKLRTSKPYTTLKEDLKGALSTSRMGSSLLHTMKSMKNAVKENVVDTSIFGD FNLDYIGPVDGHDLKMLIKVLKIARQHEGPIVVHVITKKGKGYRYAEEDKEGKWHGVSQF DPETGESLAKLPAGHKSWSEVMSRTLMKLAEHDERIVAITPAMKSGSKLSAFFDRYPTRS FDCGIAEEHAMTFAAGLCTQDIRPFISVYSSFLQRAYDQISHDVARMQLPVVIGIDRCSL VGEDGETHHGVFDIAMLRPIPNMILAQPKDAREAQNLLYSAFAQNNQPYAIRYPRGNVSY QAVEQYTYIPPGTWTQTVIREDYALNIITYGPDVDRIISKARVNQLPIRVINARFFKPID EELLTSVCEEDKPTIIFEPDMLCGGLSSAITEFANDHRYATHFVRMGIDDHFVEHGSLPQ LRKLEHLDMNTLFEIITSYLRPEKK >gi|312957683|gb|AENW01000003.1| GENE 182 178572 - 179414 1049 280 aa, chain - ## HITS:1 COG:slr0739 KEGG:ns NR:ns ## COG: slr0739 COG0142 # Protein_GI_number: 16329282 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Synechocystis # 5 279 24 301 302 206 42.0 4e-53 MSDFESYLSHCLDTLEHSRVREAMQYSLMAGGKRIRPRLLLAVLRAYGFEETIGYPVAAA IEMIHTYSLIHDDLPAMDNDTLRRGMPTCHVKFGEDVAILAGDALLTQAFYTAAACTCRA EVLVEILKLLSEFSGANGMILGQIKDLEGEANPGIDHAGLQVIHYYKTGRLLSLPLVCAA LLAGHREDAAVWERIGADTGLSFQIQDDILDVTSTVEELGKNINSDAENEKTTYVTLMGV EAAREEADRYYRRALAQLDALPLDAAPVRELFDQLMKRKN >gi|312957683|gb|AENW01000003.1| GENE 183 179407 - 179619 413 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915117|ref|ZP_02077330.1| ## NR: gi|160915117|ref|ZP_02077330.1| hypothetical protein EUBDOL_01125 [Eubacterium dolichum DSM 3991] # 1 65 1 65 70 73 69.0 4e-12 MEQKLPFKQSMSRLEEIIAALEKNEIELEDAIALFEEGLQLVNSCDSQLKNFENRVQELL NTYQEGSDNV >gi|312957683|gb|AENW01000003.1| GENE 184 179619 - 180947 1621 442 aa, chain - ## HITS:1 COG:BS_yqiB KEGG:ns NR:ns ## COG: BS_yqiB COG1570 # Protein_GI_number: 16079486 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Bacillus subtilis # 1 439 1 443 448 308 39.0 1e-83 MSQNVYSVSALVHYIKQTLDNDIRIQSILIKGEISNFTNHRSGHWYFTLKDARSKISCVM FSSHARRCNILLKEGMKVIVTASVSMYEAGGSVQLYVTAVRSDGLGDLFLQLEEVKKKLA AQGLFDPQKKKPLPQYPMRIGVITAKTGAAVQDILTTISRRWPLAEVVVYPSLVQGIQAS GAIVENLRKADQGGHDVILLARGGGPIEDLWCFNEEAVARAVFAMHTVIVTGVGHETDTT LVDYVSDARAPTPTAAAELITPDLEEVRMNVSLMRRRLVKDMETRLHMAKQALEPIRSHR YMRDPLSYIREEEMKLAMHVQQLSIVEATVAAMAMQLKQNSHKLAIHSERLFQKNTRSIA ESRLRLTQALHNYDTLRKRQIGNISALLDAYSPLKSLSRGYAIAYHGDEVISSVDAVEQN DRLRLRMQDGYLYTNIEKKEKL >gi|312957683|gb|AENW01000003.1| GENE 185 180944 - 181321 518 125 aa, chain - ## HITS:1 COG:UU300 KEGG:ns NR:ns ## COG: UU300 COG0781 # Protein_GI_number: 13357860 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Ureaplasma urealyticum # 60 125 60 125 127 58 40.0 2e-09 MNSRHKLRELAMTSLYQHFLLQKDIKECVYDNSETNEIDPFLYTVTIDAIRYQDVYIDKI NAALRQDWTFARLGFVEQAILMMAACELDLETAPKAIVIDEAVTLAKKYCDDETYRLING VLDRL >gi|312957683|gb|AENW01000003.1| GENE 186 181397 - 182299 1142 300 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1981 NR:ns ## KEGG: Cphy_1981 # Name: not_defined # Def: 5'-nucleotidase (EC:3.1.3.5) # Organism: C.phytofermentans # Pathway: Purine metabolism [PATH:cpy00230]; Pyrimidine metabolism [PATH:cpy00240]; Nicotinate and nicotinamide metabolism [PATH:cpy00760]; Metabolic pathways [PATH:cpy01100]; Biosynthesis of secondary metabolites [PATH:cpy01110] # 1 296 1 296 298 373 64.0 1e-102 MAVSLEDCLVIGICSRALFDLDDENYIYETKGLQAYSEYQLAHEQEILKPGSGFALVKAL LKLNESSKKRRVEVLIMSRNSADTSLRIFTSIAHYGLDITRAVLSGGGPLTGYLKAFGVD LFLSANEEDVRSALAAGFAAGRIYTNAIEGYDPLQDIAQIRIAFDGDAVLFSDASEQIFQ KDGLEAFAEHEKACARQVLPEGPFAQFLKTIAALQKEFEGHAPIRTALVTARNAPAHERV IRTLRAWDVRIDEAFFLGGITKREVLKAFGAHIFFDDQSSHTTPASSVVPSAQVVYGDGK >gi|312957683|gb|AENW01000003.1| GENE 187 182350 - 182679 406 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400613|ref|ZP_06644758.1| ## NR: gi|293400613|ref|ZP_06644758.1| hypothetical protein HMPREF0863_00898 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 109 1 109 109 161 76.0 1e-38 MAQEYIALKERNNAGVIALSKSAFQTIAKIVVEEDENIRLADSATPFKYPISCKIVNDQL ILSIDIKVKYSVNVNEESSKVQSKIFENIEHMTGYTPDIIDIHVVGFIF >gi|312957683|gb|AENW01000003.1| GENE 188 182719 - 183276 724 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400612|ref|ZP_06644757.1| ## NR: gi|293400612|ref|ZP_06644757.1| putative stage III sporulation protein AH [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 185 1 181 181 119 53.0 8e-26 MNKQALAFLTMFSLILMLSVYYVTLPADSTSVMEEQAPQSDKKADKENTAAKTEDAQGKT EEAQEQKKDTSESADGSTKLQDSINQKKEEEINRNSSVVADTKSDDSAKKEALAAIDELK DEKSMQKSVADLLKKDGYQTAVEINGDTCIISVFEQKDDKNVAKTIMQKAQEATNHKYLM EVTFK >gi|312957683|gb|AENW01000003.1| GENE 189 183338 - 184714 1941 458 aa, chain - ## HITS:1 COG:no KEGG:CTC00421 NR:ns ## KEGG: CTC00421 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 456 17 472 535 270 37.0 1e-70 MRLKVFDTIDEALALLSENNEFYHEIEREIEQYLIAVFKESSEMIIDINSRVKSRESLRE KIIRNRFYVENDSAQGILDNLSDLIGFIIECRFIEDEYNVLNKIRETLNIRNEEDGFYYN EINPHFFLDCASRQPQIQKNGFAIYRIDGYYLKDGQKVNVELQIKALVHSFWGEIEHKLV YKNTNYYVYDDFMKDLLASIKANLTITDRQLNIIYNQMQETSLSDASITETSFEKQISKA INDLFALKMNESIGFTMNLKSVSTILGHYIFIKDIRFDGGNNDRISSLFRTFKKLNSIQM DFENEILMDADFYSKDVFVHILGNYLISVLNRDYDWFVFFKMLFAIEPGNNMEDFCLFLN VIKNYLVDNYWLNTSFVRLPMDQSDLLHEECARILANSLCEIGTIDIIHDDKMVAINKAF VRFIEELENRVISYSDFMQYRSAYYEDWMQRMNNIFQK >gi|312957683|gb|AENW01000003.1| GENE 190 184705 - 185649 438 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 18 304 18 312 317 173 32 6e-42 MKVVHINLTGTAVIEEPLTACIGYFDGLHLGHQKLIEEVKRVAARRNTRCALITFDPDPW CVIRGLQDIAHITPMKQRMRIAEAMGIEYWIILDFSREMADLTPQDFHEKVLKPLRLDTL VCGYDFHYGRKGEGDAQSLHEQTDFDVHVIDQVSSEHRKISSSRIEELIQEGDMEKAARF MGRWYDMEGSVKGGSHVGRKNGFPTANLRLQELYVMPKKGVYVGAVKVLGTWHRAMMNVG NNPTYNYQEAGSIEAHLLDFDQDIYEEPVIFRFLSYIREERKFPDARALGEQLKKDLATT RSYFEKGKESALCD >gi|312957683|gb|AENW01000003.1| GENE 191 185658 - 186488 861 276 aa, chain - ## HITS:1 COG:BS_truB KEGG:ns NR:ns ## COG: BS_truB COG0130 # Protein_GI_number: 16078729 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Bacillus subtilis # 1 227 2 234 309 194 43.0 1e-49 MDGILLINKEQNMTSHDVVARLRRILHTTKIGHSGTLDPNATGVLLVLIGKACKALPFLE DTDKEYIATLQLGIQTISDDIWMEPLKEAPIQPIADFQSVLDSFRGVQKQVPPMISSVRV NGRKLYEYAREGIAVTRPEREVTIYDIKALDTQKLQFRVSCSSGTYVRSLCHDIAQKTGN LGCMSSLVRTKVGRFSLDECVTLQDVQEGRFQLHTLQEVLSHYEPVEYERPADIYNGKKI TLRCEADDVAITHNGNIVAIYQREDAAVFRCVRGLW >gi|312957683|gb|AENW01000003.1| GENE 192 186599 - 187552 648 317 aa, chain + ## HITS:1 COG:NMA1465 KEGG:ns NR:ns ## COG: NMA1465 COG0037 # Protein_GI_number: 15794367 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Neisseria meningitidis Z2491 # 13 232 25 244 319 132 32.0 6e-31 MELHTILGDIRKADQDYHLIDDGDRIAVGVSGGKDSMVLLTALHMYSKFADRNFEVVGIH IKLGFPNMDFSEVVAFCRQQGITFYQYDSQVYEILKRNPDKEGNIKCSLCSKFKKATVID AAKKLNCTKVAFGHHSDDAVETLLMNAIHGGKLATFLPKMYMSRTDTTFIRPLVYSYESD ILSALERNQIPFVKSTCPNDGYTERQAMKDMLQEFYRSYPMAQKNFIRMLYNEDQVELWH REGDHRAEKAKSMSVLLKEEGDLQLTRHGANYFIVYSHSDTPKQRCHLKIREEESKAIMD GTAIKEIFQTYSSTKDI >gi|312957683|gb|AENW01000003.1| GENE 193 187758 - 188336 672 192 aa, chain - ## HITS:1 COG:CAC1938 KEGG:ns NR:ns ## COG: CAC1938 COG3481 # Protein_GI_number: 15895211 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Clostridium acetobutylicum # 17 192 17 191 191 73 32.0 2e-13 MENKERFLSIYREHIHREGSEKLLDYLLSEHSDFFRAPASTRFHGAHAQGLLEHSLNVYD CLKDYLSRPRVKECYHMDYNEETIAIVALLHDICKINCYKESTRNQKVNGQWVQVPFYEY EDRLPYGHGEKSVYIITGFMRLSREEAFAIRYHMGFSGSEEVRNVGAAFEMYPLAFALST ADMEATYYLEGK >gi|312957683|gb|AENW01000003.1| GENE 194 189053 - 189847 980 264 aa, chain + ## HITS:1 COG:BH2208 KEGG:ns NR:ns ## COG: BH2208 COG1273 # Protein_GI_number: 15614771 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 6 250 8 256 280 162 38.0 4e-40 MAVAHKGAISFGLVHIPIQMYRTTRDVDISFNQLCKKTHERVHYKKYCGHCDKELKAADI VKGYQYEKDKYVIMDNEEIDALKAEKDRTITILQFTKLAEIDDIYYEKNYYAVPEKHAEK AYELLRDAMAKLSVVAIAKTVIGTKETLLALCPGEVGILVKTLFYEEEIAENPKAFAHPK LVKAESDMAKQLIQSMTKPFDPSDYHDEFQERLRSAIEEKISGQHIVHASDRKQDTATPV DLMEALQQSLSEMKPKGRRRSVKH >gi|312957683|gb|AENW01000003.1| GENE 195 189847 - 190779 825 310 aa, chain + ## HITS:1 COG:AF1725 KEGG:ns NR:ns ## COG: AF1725 COG1793 # Protein_GI_number: 11499314 # Func_class: L Replication, recombination and repair # Function: ATP-dependent DNA ligase # Organism: Archaeoglobus fulgidus # 1 307 1 311 313 179 35.0 8e-45 MDFAARDASPMLIGLEQPAFDDEDYIYEWKLDGVRCLLYLDKDNTELRNKRNLKLNAKFP ELTQLHKQVKTRCILDGELYIFHDGEPDFFQVQKRTLTSDPFKIRLHSRQFPASFTAFDI LYHKDAFVIDQPLMKRKQLLEKTVRENDRLSISRYIETNGIALFELTKQRGLEGIVAKRK DSRYVCGKRTKDWIKCKNLMDDDFIVCGYIVKEKGIVSLILAQYDQHHQVVYKGHVTMGA SLPYLMEHSEKTDTSFLTTIPEGNEDAVWIDPPLVGTVKFMQYTEQGGLRQPVFKGFRED KAITDCRSKQ >gi|312957683|gb|AENW01000003.1| GENE 196 191099 - 192022 769 307 aa, chain + ## HITS:1 COG:lin0985 KEGG:ns NR:ns ## COG: lin0985 COG1131 # Protein_GI_number: 16800054 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 3 296 1 296 303 232 41.0 8e-61 MNMIEVSHLNKKYGNFTAVKDISFHVREGELFGFLGINGAGKSTTIHMLTTLFPPNDGTV QICNHRLGKDNQEIRKCIGVVPQQNRLDDKLSVRENLLIHGSLYENSRSALQHREKEVCE LLGLQEIAAKRYAHLSGGLKRRCEIAAALMHEPRILFLDEPTTGLDPATRQSVWNCIEQL QKKRKMTVFLTTHYMEEAAKAAHIAVIDHGELLEYGTPYELKDRHAKDKLILTAAKQEHL AKLLQHLQVSYEQNDQRYQIELNTTMDALQILPAVQPYIEGFEVLQGTMDDVFLHITGKT PEEEVAL >gi|312957683|gb|AENW01000003.1| GENE 197 192019 - 192921 902 300 aa, chain + ## HITS:1 COG:lin0986 KEGG:ns NR:ns ## COG: lin0986 COG0842 # Protein_GI_number: 16800055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 7 296 1 283 284 139 31.0 7e-33 MTALSTLTRRHILLYVRDRSAVFFSMLSVLIVLLLMLVFLGDMNKDELMQLVQQAHGSIQ EGDAMHLITMWTIAGILVVNAFTVPITMIGIFIQDKEQKKMESFYCSCVPRSILMLSYLL SAMVMGFLMCMLLMALSFCYVSFSGNDFLNLSQFLQACGLLLLCTFVSSALVALLAQWVN SDHAWGAFSTLAGTLIGFLGGIYLPVGMLPGAVQGILKSLPFLHETAMMRDIFTASALQD LFHTLPASLSDTYREAMGITISLNNQTLSIHIQIFALLLCGIIALGITVYVMNRHTAFNR >gi|312957683|gb|AENW01000003.1| GENE 198 192933 - 193373 461 146 aa, chain + ## HITS:1 COG:lin0983 KEGG:ns NR:ns ## COG: lin0983 COG3279 # Protein_GI_number: 16800052 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Listeria innocua # 26 146 26 146 151 95 40.0 2e-20 MKIIIEEKASREDEDTIIVRCASLNESILKLLQQLKAGDELITCTQNGTIARIRPDDVYY FESVDNKTFLYTEKEVYEIRQKLYEIEDSYAGLDFFRCSKSIIVNLSKIRFLSPVLGSRL EATLLNDENIMISRQYVAALKVLLNI >gi|312957683|gb|AENW01000003.1| GENE 199 193385 - 193813 413 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296442869|ref|ZP_06884927.1| ## NR: gi|296442869|ref|ZP_06884927.1| hypothetical protein CloleDRAFT_3013 [Clostridium lentocellum DSM 5427] # 4 140 5 142 146 70 28.0 4e-11 MRILKELMFTFSAITTCTVIGAAVFISIFWKNSELSSAILWQIIICSLLCTLGNLLFRKE CKSRRLYYGIVFLHYLYIDAVVLLSGLYFGWFHLDSIQMVLSMLLMIACIFLIVYTTLQL RSKRDTTLMNERLQKYYKKRTS >gi|312957683|gb|AENW01000003.1| GENE 200 194217 - 195962 2375 581 aa, chain - ## HITS:1 COG:BH1252 KEGG:ns NR:ns ## COG: BH1252 COG0173 # Protein_GI_number: 15613815 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Bacillus halodurans # 1 577 2 585 595 627 52.0 1e-179 MNRTHTNGELRLCDAGKEVTLIGWVAKRRNFGSLVFIDLRDRTGITQLVFDEQLSEQIRD VRNEYILEATGCVMERKDKNPKLPTGEIEIQVRAVTIINRAETTPIIVADETDALEDTRL KYRYLDLRRPVMQQKLMLRHRITHSMREYLDSKEFIEIETPMLGRSTPEGARDYLVPSRV HPGSFYALPQSPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQTDFTQVDLETSFLSDV EIQTMMEEMLQKLMKDVKGMDISIPFPRLTWTEAMNRYGSDKPDNRFGMELQEITELFEN CGFKVFADCIADKGSIKAVVVPGKAGMTRKEIDKITELAKKNGAKGLVTLKYKDEELSGP IVKFLAEEEIQALVMRLSLKNEDLVLIVSDAWRTTCEVLGVLRNHFGAELGLKKSDEFSY LWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDSDPGKVHAIAYDVVLNGYELGGG SLRIYDGAMQDKMFEVLGFTEEKIQENFGWFVDALKYGTPPHGGLAFGLDRIAMILSESE SIRDVIAFPKNANAKCPMSDAPTPVDAAQLEELHIALTEEE >gi|312957683|gb|AENW01000003.1| GENE 201 195975 - 197312 1852 445 aa, chain - ## HITS:1 COG:BH1251 KEGG:ns NR:ns ## COG: BH1251 COG0124 # Protein_GI_number: 15613814 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Bacillus halodurans # 1 416 1 415 428 431 51.0 1e-120 MSYQVPRGTQDILPNEISKWHRLEELIRQFTYVYNYQEIRTPIFEHTNVFKRGNDSSDMV NKEMYTFQLENSSTSLTLRPEGTAGVARAFVEHKMYGYADLPMKMYYVGPQCRHERPQKG RMRIFNQFGVEVIGAKSPLLDVETIALGWSFISALGLKDMKVLINTLGDDASRAAYREAL KEHFKNDIDHMCTDCKRRYEQNPLRILDCKIDHDLDIMKQVPKMADYLNEESKAYFEQVL EGLDALGIPYEVDDKLVRGLDYYTHTVFEVVSVNKEMGAQSTVFAGGRYDGLVEYFGGPE GMSGIGWAMGLERLLIALEAEGISLVDEDSLDVYVLCLSPKASTTVLQVVTQLRAAGYRT DTDYLNRSMKAQFKTVDRMHAKVAIMIGEQDLESGSAAVKNIETKEKTEVAFDSIVEAID AMFGEAEEEHTCTCGEEHCTCQKEQ >gi|312957683|gb|AENW01000003.1| GENE 202 197667 - 198404 899 245 aa, chain - ## HITS:1 COG:VCA0006 KEGG:ns NR:ns ## COG: VCA0006 COG0217 # Protein_GI_number: 15600777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 1 236 1 235 239 237 50.0 1e-62 MGRHFEVRAASMAKTAAVKAKLYSRYGKEILMAAKSGVPDPDMNASLKKVIERAKANQVP ADVIKRAIEKAKGGTNENYSAATYEGFGAGGQATIIIDCLTDNANRTIADLRGCFNKSHA KIGVSGCVSFNYEHVGLISIKYDDEEAMMDALIMAEVDLKDIEVEEGQMTITVEPTELNK AKDAIEELIPEVSFDILEDTMLPNEYVELEGEDLMLFQRLVTLLNEVDDVQQVYHNVRNL NDSVE Prediction of potential genes in microbial genomes Time: Sat May 14 01:13:40 2011 Seq name: gi|312957472|gb|AENW01000004.1| Clostridium sp. HGF2 contig00007, whole genome shotgun sequence Length of sequence - 196740 bp Number of predicted genes - 188, with homology - 153 Number of transcription units - 102, operones - 41 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 5 - 850 787 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 987 - 1046 79.0 + TRNA 970 - 1045 72.7 # His GTG 0 0 2 2 Op 1 . + CDS 1286 - 1588 503 ## BAD_0119 hypothetical protein 3 2 Op 2 . + CDS 1572 - 3170 2017 ## COG0661 Predicted unusual protein kinase + Term 3340 - 3374 0.5 4 3 Op 1 . - CDS 3380 - 4105 679 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 5 3 Op 2 28/0.000 - CDS 4111 - 7137 3319 ## COG0419 ATPase involved in DNA repair 6 3 Op 3 . - CDS 7127 - 8257 1230 ## COG0420 DNA repair exonuclease - Term 8271 - 8298 0.1 7 3 Op 4 . - CDS 8299 - 9066 748 ## gi|293400900|ref|ZP_06645045.1| hypothetical protein HMPREF0863_01185 - Prom 9144 - 9203 8.0 - Term 9194 - 9247 8.2 8 4 Op 1 22/0.000 - CDS 9253 - 10089 1245 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 9 4 Op 2 32/0.000 - CDS 10260 - 10940 1034 ## COG2011 ABC-type metal ion transport system, permease component 10 4 Op 3 . - CDS 10934 - 11968 1358 ## COG1135 ABC-type metal ion transport system, ATPase component 11 5 Op 1 . - CDS 12347 - 12811 638 ## gi|293400905|ref|ZP_06645050.1| conserved hypothetical protein 12 5 Op 2 . - CDS 12869 - 13615 579 ## gi|293400906|ref|ZP_06645051.1| imidazolonepropionase - Prom 13854 - 13913 3.5 + Prom 13533 - 13592 2.4 13 6 Tu 1 . + CDS 13704 - 14591 871 ## GTNG_0200 esterase + Term 14833 - 14862 -0.5 - Term 14682 - 14734 9.1 14 7 Op 1 . - CDS 14782 - 15822 1214 ## COG4260 Putative virion core protein (lumpy skin disease virus) 15 7 Op 2 . - CDS 15835 - 16197 435 ## COG2314 Predicted membrane protein - Prom 16218 - 16277 7.8 16 8 Op 1 . - CDS 16377 - 17042 894 ## gi|293400909|ref|ZP_06645054.1| conserved hypothetical protein 17 8 Op 2 4/0.000 - CDS 17032 - 18513 1785 ## COG1488 Nicotinic acid phosphoribosyltransferase 18 8 Op 3 . - CDS 18516 - 19142 754 ## COG1335 Amidases related to nicotinamidase - Prom 19173 - 19232 6.5 + Prom 19253 - 19312 6.2 19 9 Tu 1 . + CDS 19342 - 19839 300 ## 20 10 Tu 1 . + CDS 19961 - 20593 248 ## + Term 20699 - 20733 1.0 - Term 20544 - 20590 5.3 21 11 Tu 1 . - CDS 20763 - 21236 579 ## COG4894 Uncharacterized conserved protein - Prom 21258 - 21317 5.7 - Term 21325 - 21383 2.1 22 12 Op 1 . - CDS 21450 - 23561 2017 ## COG0370 Fe2+ transport system protein B 23 12 Op 2 . - CDS 23558 - 23785 313 ## gi|293400913|ref|ZP_06645058.1| ferrous iron transport protein B - Prom 23915 - 23974 7.6 + Prom 23893 - 23952 9.0 24 13 Tu 1 . + CDS 23973 - 25304 1650 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 25319 - 25352 4.5 + Prom 25322 - 25381 4.1 25 14 Tu 1 . + CDS 25486 - 25755 131 ## 26 15 Tu 1 . - CDS 25778 - 26350 711 ## COG0194 Guanylate kinase - Prom 26372 - 26431 7.4 + Prom 27066 - 27125 5.5 27 16 Tu 1 . + CDS 27211 - 28875 1763 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP + Term 28947 - 28987 2.0 28 17 Op 1 . - CDS 29424 - 29669 197 ## 29 17 Op 2 . - CDS 29672 - 29992 338 ## - Prom 30027 - 30086 5.1 - Term 30011 - 30049 -0.9 30 18 Op 1 . - CDS 30271 - 30570 267 ## COG3450 Predicted enzyme of the cupin superfamily 31 18 Op 2 3/0.000 - CDS 30582 - 31082 495 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 32 18 Op 3 . - CDS 31099 - 31962 795 ## COG0191 Fructose/tagatose bisphosphate aldolase 33 18 Op 4 . - CDS 31967 - 32923 706 ## COG2267 Lysophospholipase 34 18 Op 5 . - CDS 32928 - 33230 305 ## 35 18 Op 6 10/0.000 - CDS 33190 - 33816 660 ## COG2376 Dihydroxyacetone kinase 36 18 Op 7 . - CDS 33813 - 34835 870 ## COG2376 Dihydroxyacetone kinase 37 18 Op 8 4/0.000 - CDS 34863 - 36497 1971 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 38 18 Op 9 . - CDS 36543 - 36938 427 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 37085 - 37144 9.5 - Term 37134 - 37165 0.2 39 19 Op 1 . - CDS 37175 - 37993 495 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 38045 - 38104 8.6 40 19 Op 2 . - CDS 38121 - 39137 1303 ## COG2502 Asparagine synthetase A - Prom 39183 - 39242 12.8 41 20 Tu 1 . - CDS 39427 - 39924 185 ## PROTEIN SUPPORTED gi|229883981|ref|ZP_04503445.1| acetyltransferase, ribosomal protein N-acetylase - Prom 39960 - 40019 3.1 42 21 Op 1 . - CDS 40387 - 40644 384 ## 43 21 Op 2 . - CDS 40703 - 40918 129 ## 44 21 Op 3 . - CDS 40999 - 41370 444 ## Cphy_0675 hypothetical protein 45 21 Op 4 . - CDS 41405 - 41851 397 ## Cphy_0953 hypothetical protein - Prom 41895 - 41954 5.1 - Term 41900 - 41942 5.0 46 22 Op 1 . - CDS 41956 - 42264 482 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 47 22 Op 2 . - CDS 42279 - 42449 199 ## gi|160916010|ref|ZP_02078218.1| hypothetical protein EUBDOL_02038 48 22 Op 3 3/0.000 - CDS 42451 - 43032 785 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 49 22 Op 4 13/0.000 - CDS 43036 - 43695 825 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 50 22 Op 5 12/0.000 - CDS 43710 - 44228 813 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 51 22 Op 6 12/0.000 - CDS 44240 - 45742 1939 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 52 22 Op 7 . - CDS 45756 - 47048 1404 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC - Prom 47117 - 47176 6.4 + Prom 47190 - 47249 5.6 53 23 Tu 1 . + CDS 47356 - 48468 1220 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Term 48781 - 48811 0.3 54 24 Tu 1 . - CDS 48837 - 49160 144 ## - Prom 49251 - 49310 7.1 55 25 Tu 1 . - CDS 49518 - 50279 304 ## - Prom 50413 - 50472 4.4 56 26 Tu 1 . - CDS 50831 - 51379 722 ## COG0842 ABC-type multidrug transport system, permease component - Prom 51427 - 51486 3.3 - Term 51446 - 51481 1.3 57 27 Tu 1 . - CDS 51490 - 52557 1454 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 52742 - 52801 4.7 + Prom 53248 - 53307 3.5 58 28 Tu 1 . + CDS 53341 - 54237 915 ## COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain + Term 54252 - 54285 -0.4 - Term 54351 - 54400 1.3 59 29 Op 1 . - CDS 54415 - 57039 3228 ## COG0525 Valyl-tRNA synthetase 60 29 Op 2 . - CDS 57054 - 57623 229 ## PROTEIN SUPPORTED gi|227395847|ref|ZP_03879169.1| acetyltransferase, ribosomal protein N-acetylase - Prom 57867 - 57926 7.7 - Term 58287 - 58333 7.2 61 30 Tu 1 . - CDS 58381 - 59100 973 ## gi|293401445|ref|ZP_06645588.1| conserved hypothetical protein - Prom 59281 - 59340 4.1 + Prom 59066 - 59125 4.3 62 31 Tu 1 . + CDS 59296 - 59922 800 ## EUBELI_00925 hypothetical protein - Term 59935 - 59968 0.5 63 32 Op 1 . - CDS 59970 - 60551 436 ## EUBELI_20252 hypothetical protein 64 32 Op 2 . - CDS 60541 - 60831 326 ## COG0640 Predicted transcriptional regulators 65 32 Op 3 . - CDS 60836 - 61120 316 ## - Prom 61153 - 61212 9.3 - Term 61630 - 61672 -0.9 66 33 Tu 1 . - CDS 61713 - 61985 308 ## - Prom 62153 - 62212 2.5 67 34 Tu 1 . - CDS 62264 - 62554 160 ## - Prom 62575 - 62634 5.0 - Term 62677 - 62714 5.5 68 35 Op 1 4/0.000 - CDS 62726 - 63316 673 ## COG0218 Predicted GTPase 69 35 Op 2 3/0.000 - CDS 63318 - 65642 2878 ## COG0466 ATP-dependent Lon protease, bacterial type 70 35 Op 3 . - CDS 65703 - 66980 1627 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 71 35 Op 4 . - CDS 67021 - 67743 889 ## gi|293401434|ref|ZP_06645577.1| conserved hypothetical protein - Prom 67766 - 67825 7.0 72 36 Tu 1 . - CDS 68172 - 69755 1126 ## COG2199 FOG: GGDEF domain - Prom 69872 - 69931 10.9 - Term 70180 - 70229 0.3 73 37 Tu 1 . - CDS 70252 - 71844 1247 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Prom 71867 - 71926 7.8 - TRNA 72073 - 72149 89.6 # Arg TCT 0 0 - Term 72209 - 72256 3.0 74 38 Op 1 . - CDS 72257 - 73948 195 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 75 38 Op 2 . - CDS 73941 - 74714 822 ## - Prom 74840 - 74899 7.0 - Term 75238 - 75275 8.2 76 39 Tu 1 . - CDS 75288 - 75824 417 ## PROTEIN SUPPORTED gi|228583171|ref|YP_002853872.1| 30S ribosomal protein S30AE family - Prom 75848 - 75907 6.2 + Prom 75779 - 75838 6.6 77 40 Tu 1 . + CDS 76027 - 76446 437 ## Cphy_3059 hypothetical protein - Term 76564 - 76603 3.4 78 41 Op 1 . - CDS 76825 - 80892 3323 ## Dhaf_4303 LPXTG-motif cell wall anchor domain protein 79 41 Op 2 . - CDS 80912 - 81061 202 ## - Prom 81172 - 81231 8.4 - Term 81292 - 81343 2.0 80 42 Tu 1 . - CDS 81351 - 82280 1192 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog 81 43 Tu 1 . - CDS 82393 - 83367 854 ## Ccel_2610 hypothetical protein - Prom 83401 - 83460 5.3 - Term 83429 - 83462 0.6 82 44 Op 1 . - CDS 83466 - 85319 1196 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 83 44 Op 2 . - CDS 85312 - 85530 127 ## - Prom 85694 - 85753 4.2 + Prom 85638 - 85697 7.0 84 45 Tu 1 . + CDS 85911 - 87083 532 ## + Term 87104 - 87142 1.2 - Term 87090 - 87132 -0.2 85 46 Op 1 23/0.000 - CDS 87162 - 87863 929 ## COG1346 Putative effector of murein hydrolase 86 46 Op 2 . - CDS 87860 - 88213 435 ## COG1380 Putative effector of murein hydrolase LrgA 87 46 Op 3 . - CDS 88210 - 90093 2181 ## COG1032 Fe-S oxidoreductase 88 47 Tu 1 . - CDS 91070 - 91990 906 ## COG0598 Mg2+ and Co2+ transporters - Prom 92069 - 92128 2.2 - Term 92275 - 92308 -1.0 89 48 Op 1 . - CDS 92316 - 93167 756 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 90 48 Op 2 . - CDS 93160 - 94623 1683 ## Glov_0012 hypothetical protein 91 48 Op 3 . - CDS 94673 - 95614 961 ## COG2378 Predicted transcriptional regulator 92 48 Op 4 . - CDS 95627 - 95986 362 ## gi|160915940|ref|ZP_02078148.1| hypothetical protein EUBDOL_01964 - Prom 96026 - 96085 9.8 - Term 96192 - 96229 -0.0 93 49 Op 1 . - CDS 96247 - 96885 646 ## gi|160915939|ref|ZP_02078147.1| hypothetical protein EUBDOL_01963 94 49 Op 2 . - CDS 96912 - 98165 1105 ## COG4294 UV damage repair endonuclease - Prom 98321 - 98380 3.7 + Prom 98280 - 98339 5.7 95 50 Tu 1 . + CDS 98359 - 99135 847 ## COG0561 Predicted hydrolases of the HAD superfamily 96 51 Tu 1 . - CDS 99555 - 99992 510 ## COG1846 Transcriptional regulators - Prom 100088 - 100147 6.5 + Prom 99993 - 100052 5.4 97 52 Tu 1 . + CDS 100150 - 101217 938 ## COG1289 Predicted membrane protein + Term 101220 - 101253 1.2 - Term 101207 - 101239 1.0 98 53 Op 1 . - CDS 101459 - 101581 104 ## - Prom 101602 - 101661 2.1 99 53 Op 2 18/0.000 - CDS 101675 - 102250 603 ## COG2156 K+-transporting ATPase, c chain 100 53 Op 3 20/0.000 - CDS 102262 - 104319 2260 ## COG2216 High-affinity K+ transport system, ATPase chain B 101 53 Op 4 1/0.071 - CDS 104338 - 106056 2003 ## COG2060 K+-transporting ATPase, A chain - Prom 106166 - 106225 5.8 - Term 106787 - 106813 -1.0 102 54 Op 1 16/0.000 - CDS 106814 - 107497 1015 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 103 54 Op 2 . - CDS 107490 - 109037 1661 ## COG2205 Osmosensitive K+ channel histidine kinase 104 54 Op 3 17/0.000 - CDS 109034 - 110536 1372 ## COG0168 Trk-type K+ transport systems, membrane components 105 54 Op 4 1/0.071 - CDS 110533 - 111204 701 ## COG0569 K+ transport systems, NAD-binding component 106 54 Op 5 . - CDS 111201 - 111650 490 ## COG0569 K+ transport systems, NAD-binding component - Term 111976 - 112023 6.3 107 55 Tu 1 . - CDS 112055 - 113164 1373 ## COG0686 Alanine dehydrogenase - Prom 113334 - 113393 6.8 - Term 113513 - 113555 -0.5 108 56 Tu 1 . - CDS 113559 - 113780 287 ## Sez_1494 phosphorylase Pnp/UDP family 109 57 Op 1 . - CDS 113913 - 114326 488 ## SMU.2126c putative purine-nucleoside phosphorylase 110 57 Op 2 . - CDS 114392 - 114754 302 ## COG3339 Uncharacterized conserved protein - Term 115289 - 115324 2.8 111 58 Tu 1 . - CDS 115392 - 117299 2160 ## COG2205 Osmosensitive K+ channel histidine kinase - Prom 117333 - 117392 5.9 112 59 Tu 1 . - CDS 117493 - 118110 602 ## - Prom 118148 - 118207 3.5 113 60 Tu 1 . - CDS 118740 - 119570 234 ## BPUM_1130 acetylxylan esterase - Prom 119600 - 119659 8.3 + Prom 119867 - 119926 3.2 114 61 Tu 1 . + CDS 119946 - 120752 921 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 121044 - 121073 -0.4 115 62 Tu 1 . - CDS 121075 - 121563 455 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 121583 - 121642 6.3 116 63 Tu 1 . - CDS 121713 - 122465 764 ## COG0588 Phosphoglycerate mutase 1 - Prom 122508 - 122567 5.5 - Term 122559 - 122607 -0.9 117 64 Tu 1 . - CDS 122807 - 123649 772 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 123836 - 123895 6.9 - Term 123936 - 123977 4.0 118 65 Op 1 . - CDS 124003 - 124503 458 ## CDR20291_0958 AraC-family transcriptional regulator - Prom 124526 - 124585 3.3 119 65 Op 2 1/0.071 - CDS 124591 - 125439 732 ## COG2207 AraC-type DNA-binding domain-containing proteins 120 65 Op 3 . - CDS 125490 - 126137 302 ## PROTEIN SUPPORTED gi|241889384|ref|ZP_04776685.1| 30S ribosomal protein S8 - Term 126639 - 126668 -0.3 121 66 Tu 1 . - CDS 126722 - 128062 1399 ## COG0733 Na+-dependent transporters of the SNF family - Prom 128088 - 128147 7.2 + Prom 128080 - 128139 6.5 122 67 Tu 1 . + CDS 128261 - 128722 429 ## COG1881 Phospholipid-binding protein 123 68 Tu 1 . - CDS 128965 - 129456 526 ## Exig_1132 isochorismatase hydrolase 124 69 Tu 1 . - CDS 129679 - 130581 781 ## COG2378 Predicted transcriptional regulator - Prom 130620 - 130679 4.5 - Term 130654 - 130695 6.5 125 70 Tu 1 . - CDS 130708 - 131214 445 ## GYMC10_6208 hypothetical protein - Prom 131253 - 131312 5.2 126 71 Op 1 . - CDS 131804 - 132256 469 ## 127 71 Op 2 . - CDS 132282 - 133160 899 ## 128 71 Op 3 . - CDS 133177 - 133386 142 ## 129 71 Op 4 . - CDS 133390 - 133692 153 ## - Prom 133741 - 133800 2.0 - Term 133744 - 133777 -0.2 130 72 Tu 1 . - CDS 133828 - 134163 281 ## - Prom 134246 - 134305 7.8 + Prom 134205 - 134264 11.0 131 73 Tu 1 . + CDS 134446 - 134955 -121 ## Mbur_0365 putative transposase - Term 135029 - 135070 -0.9 132 74 Tu 1 . - CDS 135180 - 136451 516 ## COG3344 Retron-type reverse transcriptase + Prom 136909 - 136968 4.5 133 75 Op 1 . + CDS 137077 - 137511 133 ## gi|223983806|ref|ZP_03633973.1| hypothetical protein HOLDEFILI_01254 134 75 Op 2 . + CDS 137453 - 137662 168 ## + Term 137680 - 137712 -0.7 135 76 Tu 1 . - CDS 137781 - 138134 255 ## - Prom 138182 - 138241 5.5 + Prom 138842 - 138901 3.1 136 77 Tu 1 . + CDS 138926 - 140752 989 ## COG3344 Retron-type reverse transcriptase 137 78 Op 1 . - CDS 141060 - 141920 586 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 138 78 Op 2 . - CDS 141913 - 142341 503 ## Amet_2040 MarR family transcriptional regulator - Prom 142372 - 142431 6.1 + Prom 142351 - 142410 4.6 139 79 Op 1 . + CDS 142507 - 142824 394 ## COG1695 Predicted transcriptional regulators 140 79 Op 2 . + CDS 142817 - 143398 382 ## Elen_1069 hypothetical protein 141 79 Op 3 . + CDS 143399 - 144514 1183 ## gi|154503396|ref|ZP_02040456.1| hypothetical protein RUMGNA_01220 + Prom 144596 - 144655 1.8 142 80 Tu 1 . + CDS 144695 - 144904 146 ## - Term 144844 - 144898 3.2 143 81 Op 1 . - CDS 145031 - 146968 1676 ## syc0402_c hypothetical protein 144 81 Op 2 . - CDS 147014 - 149278 1871 ## COG2199 FOG: GGDEF domain - Prom 149447 - 149506 7.5 145 82 Op 1 . - CDS 149673 - 150098 455 ## Cphy_2149 hypothetical protein 146 82 Op 2 . - CDS 150111 - 151631 1298 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Prom 151954 - 152013 4.9 147 83 Op 1 . + CDS 152075 - 152695 441 ## gi|225387815|ref|ZP_03757579.1| hypothetical protein CLOSTASPAR_01585 + Prom 152697 - 152756 4.4 148 83 Op 2 . + CDS 152789 - 153262 575 ## Sterm_0708 hypothetical protein 149 83 Op 3 . + CDS 153265 - 153483 91 ## + Term 153553 - 153586 0.2 - Term 153535 - 153580 5.1 150 84 Op 1 . - CDS 153669 - 154145 200 ## 151 84 Op 2 . - CDS 154216 - 154680 408 ## gi|293115771|ref|ZP_05792976.2| conserved hypothetical protein - Prom 154710 - 154769 4.3 152 85 Tu 1 . - CDS 154928 - 156871 1887 ## COG2199 FOG: GGDEF domain - Prom 156906 - 156965 4.2 - Term 157312 - 157354 4.5 153 86 Tu 1 . - CDS 157444 - 160077 3071 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 160116 - 160175 6.6 154 87 Tu 1 . + CDS 160402 - 161310 1122 ## COG1396 Predicted transcriptional regulators + Term 161413 - 161465 4.1 - Term 161481 - 161513 2.0 155 88 Tu 1 . - CDS 161526 - 162374 827 ## COG4296 Uncharacterized protein conserved in bacteria - Prom 162432 - 162491 4.4 - Term 162389 - 162427 7.9 156 89 Op 1 . - CDS 162533 - 163807 1657 ## COG0166 Glucose-6-phosphate isomerase 157 89 Op 2 . - CDS 163823 - 164176 482 ## COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) - Prom 164200 - 164259 4.3 + Prom 164184 - 164243 6.0 158 90 Op 1 . + CDS 164423 - 164878 482 ## COG1963 Uncharacterized protein conserved in bacteria 159 90 Op 2 . + CDS 164895 - 165125 399 ## COG0694 Thioredoxin-like proteins and domains + Term 165255 - 165298 6.3 160 91 Tu 1 . - CDS 165226 - 166227 1319 ## Ccel_3208 hypothetical protein - Prom 166279 - 166338 6.1 + Prom 166331 - 166390 8.3 161 92 Tu 1 . + CDS 166413 - 166973 502 ## COG1418 Predicted HD superfamily hydrolase + Term 166992 - 167036 7.2 162 93 Op 1 . - CDS 167146 - 167439 497 ## CLL_A1651 putative lipoprotein 163 93 Op 2 . - CDS 167456 - 168373 975 ## gi|160915572|ref|ZP_02077783.1| hypothetical protein EUBDOL_01580 164 93 Op 3 . - CDS 168385 - 168564 292 ## 165 93 Op 4 . - CDS 168581 - 168874 233 ## gi|293401000|ref|ZP_06645145.1| hypothetical protein HMPREF0863_01285 166 93 Op 5 . - CDS 168885 - 169187 450 ## gi|293401001|ref|ZP_06645146.1| conserved hypothetical protein 167 93 Op 6 . - CDS 169198 - 169452 278 ## 168 93 Op 7 . - CDS 169445 - 173560 2958 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 169 93 Op 8 . - CDS 173548 - 173799 127 ## 170 93 Op 9 . - CDS 173738 - 174262 527 ## COG0515 Serine/threonine protein kinase 171 93 Op 10 . - CDS 174259 - 175257 1319 ## Tgr7_2548 FHA-domain containing protein - Prom 175315 - 175374 5.9 + Prom 175310 - 175369 7.3 172 94 Tu 1 . + CDS 175390 - 175956 343 ## gi|293401006|ref|ZP_06645151.1| conserved hypothetical protein + Term 176192 - 176227 0.4 - Term 176545 - 176582 -1.0 173 95 Op 1 . - CDS 176604 - 176936 301 ## 174 95 Op 2 . - CDS 176939 - 178354 1629 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases - Prom 178541 - 178600 4.5 - Term 178545 - 178584 5.2 175 96 Tu 1 . - CDS 178632 - 179666 983 ## BMB171_C4455 hypothetical protein - Prom 179747 - 179806 5.3 176 97 Op 1 . - CDS 180005 - 180688 1054 ## COG0571 dsRNA-specific ribonuclease 177 97 Op 2 . - CDS 180728 - 182683 1998 ## COG1200 RecG-like helicase - Prom 182755 - 182814 4.5 - Term 182826 - 182858 2.4 178 98 Op 1 . - CDS 182862 - 183512 667 ## COG0127 Xanthosine triphosphate pyrophosphatase 179 98 Op 2 . - CDS 183509 - 184489 786 ## 180 98 Op 3 . - CDS 184486 - 185349 730 ## CLJ_B1117 radical SAM domain protein 181 98 Op 4 . - CDS 185361 - 185681 232 ## - Prom 185780 - 185839 8.2 - Term 185840 - 185898 9.2 182 99 Tu 1 . - CDS 185921 - 187255 947 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Term 187278 - 187323 7.4 183 100 Tu 1 . - CDS 187368 - 189941 2840 ## COG0474 Cation transport ATPase - Prom 190138 - 190197 3.2 - Term 190185 - 190222 1.2 184 101 Op 1 . - CDS 190227 - 190646 501 ## gi|160915451|ref|ZP_02077662.1| hypothetical protein EUBDOL_01459 185 101 Op 2 35/0.000 - CDS 190679 - 191776 1385 ## COG0206 Cell division GTPase 186 101 Op 3 . - CDS 191799 - 193055 1521 ## COG0849 Actin-like ATPase involved in cell division - Prom 193109 - 193168 4.9 - Term 193200 - 193228 -0.1 187 102 Op 1 . - CDS 193229 - 194650 1535 ## EUBREC_2307 hypothetical protein 188 102 Op 2 . - CDS 194655 - 196433 1917 ## COG4193 Beta- N-acetylglucosaminidase - Prom 196466 - 196525 6.2 Predicted protein(s) >gi|312957472|gb|AENW01000004.1| GENE 1 5 - 850 787 281 aa, chain - ## HITS:1 COG:BS_yitS KEGG:ns NR:ns ## COG: BS_yitS COG1307 # Protein_GI_number: 16078175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 4 278 3 283 283 102 30.0 9e-22 MKKIALMCDSSADITKEEAEKLGIHVLRMPITINGKEFIEEETISDQDIIEALGQNKSVK TAQPIIGTMTRMWDELLESYDEVFYIPLTKALSGTCRVAMGIAEQSPYQNRVFVLNSDFV CYPVVHMLLTARDMFEKGYTCVQAKEKIEQEGELFAILIPETLTALKNGGRISPAAAALA GLLKIQPLLKVEHGAIDLVDKVRTLKKAYKEGIEVVLKDIDPKEYDWMIIDAYNRKVSDE LKAALEEACGQPVEQRIFKSVIMSHTGPGTIGFGRIKKIRY >gi|312957472|gb|AENW01000004.1| GENE 2 1286 - 1588 503 100 aa, chain + ## HITS:1 COG:no KEGG:BAD_0119 NR:ns ## KEGG: BAD_0119 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 6 73 35 102 106 61 51.0 8e-09 MNTISEDIKKIMLAGIGAVATTAEKSKDVIDALVKKGELTVEQGKILNEELKHDLREKLR TPADTESIRKDLEKVSRDDLAMLKAHIEELEKGMENEQSE >gi|312957472|gb|AENW01000004.1| GENE 3 1572 - 3170 2017 532 aa, chain + ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 34 531 35 531 532 309 33.0 9e-84 MSNPNEAKTLSSKRRLAQILGILKKHHITKGVDPVKFREILEDLGPTFVKIGQIMASRQD MFSERYCKELVKLRDNVAPLPFADVQRVIEEEYGCPMQEVFSSFERIPLGSASIAQVHKA SLLDGREIVVKVQRPYIYEMMERDISLIRRAGKLLRLSEVLGSVIDINIVMDEFWFTAKQ EMDFLNEARFAMEFARNHQSITYIGAPLIEQAYTTSRVLVMEYIDGIVIDDRKTLEEGGY DLREIASKLAENYIKQIVDDGFFHADPHPGNLRIRDGKIIWIDFGMMGTLQRSDKDLMKK AVQAIGSNDTELMVDVILTLGVHDGRIDYTLFYDDMEIFMKKYIHMDLNEINLGDAIQEV FTIAHKHRISMPKGISMLARGLVTMESTMTLLDPKMNIIQIAAAHVSEHIFKKLDAKKEA VNAGRKLYEAGKRTLDIPIQFSELMRMITKGRIKLNLEIMDSSVPLKTINHMVNKLVVGI VSCGLLMASSLICTTDMTPKVLGIPAIGFIGYMTAVFLGMWLLYTVLKDKRR >gi|312957472|gb|AENW01000004.1| GENE 4 3380 - 4105 679 241 aa, chain - ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 3 239 8 245 245 298 58.0 6e-81 MYDELKKILTQSDNIVFFGGAGVSTESNIPDFRSQSGIYSKKTYPYRAETMISSEFFHEH PEQFYDFYFHEMVYERAQPNDAHLALAKLEEMGKLKAVITQNIDGLHQKAGSHKVLELHG SIHRNRCQRCRAEYDLQEMLKQKKQVPRCPSCNGILKPEVVLYGESLDMQVMEEAILFLS QADVLIVGGTSLVVYPAAGLLQYFRGSKLILINKEETAMDHRADLVIHDAIGKVMKEAVL V >gi|312957472|gb|AENW01000004.1| GENE 5 4111 - 7137 3319 1008 aa, chain - ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 1001 1 1014 1023 238 26.0 4e-62 MRPEILKLQAFGPYVKQQCINFHVFDEQHLFLIQGETGSGKTMLLDAMTYALYGKSSGSQ REDLYSMRSRFAEVQDATVVDFQFQLHQRTYRFVRTITMRKKRNQELTPQMQIDAGEIVD GEFVPFFENPKLKNVEEKAVELLGLSYAQFVQVMILPQGKFEQLLTSKSEEKQEILKTLF QMERWTGINQALSDTMKQKREQLDMKKQRREALLSGIEMQSPEEITEWLKHAGSTRRILE QEVKQKQELLEQIKQEAAQQRLRKEQLTLLQQAELDWERLLQQEEDMKQLYVYLERQKEL IKVLPEWNTLQQCRNIWKQRVDNLHAVAKQHELLNQQKQAAPLWQTQLQEYKGQEQNLRQ KLHEAQELRPLVQQLQQLLVKENALRELQDKQQQLVAQKQKHCSELNSNKEQLRQKIETA QLTLDGLEHAAQHFAVWRQADYHEQQRIQLSGMLKAEEAEEKELILQIKLREEQLIPLQQ AYDEAMRTYLNNSAVQLAALLKEHEPCPVCGSTTHPALAEKKAAYQDVVQLKQLQERLDQ EKEAVQGIQQQLEHVRLSIQMRLTAMQEHQKAIQTLLQQPFSQTEFTRLQQKQQQAEQLN LVLHELLQQQERLQQKQQEEDAALQQLQQKQQELHTEALLNDQRRTVLQDSIPCELRSPR ALSDCLQQLQQELDLTVALVVKQETRLRQLEINLAQQQRDHEHAQKEEQQAQQALQAAEI SWQAVAQNRIQEEEMQGLKQEDLQKREQQLQEYALKKEQLKTRIQDLQQRCAAIAEQNLE ALLAQQEQLMQEVEQLQLKLADITTHEAMYLQVQASITQIQKELDVEEPAFVELAHFVRA MRGDNGMGIERYVLGIMLGSITQQANQLLKLVHNGRYQIFRSDEASGRTRKYGLELSIYD SYTCNTRSVVSLSGGEKFLVSLALSLALSAVVQARNGGIQLDTMFIDEGFGTLDEHSIAD ALAVLQIMSSSRGYIGIISHVELLKENIPAGILVEKSREGSHVQIRKV >gi|312957472|gb|AENW01000004.1| GENE 6 7127 - 8257 1230 376 aa, chain - ## HITS:1 COG:lin1687 KEGG:ns NR:ns ## COG: lin1687 COG0420 # Protein_GI_number: 16800755 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Listeria innocua # 1 372 1 372 374 186 31.0 7e-47 MRVLHTADWHLGMDLYKVTLMEDQRWFKQQLKAIIEEECIDAVLVAGDVYDTILASKEAI ELYDDIMYMLCMELKKKVIVIAGNHDSATRLASLSRLLEGMGLYIIGSLKEKVKGIRVDD CMIYPIPYFHVEQVRKVYQKDVHSQAEAFSCICTDILSTADHAYRPIAMAHAFLANAEVC ESDRFANVGGAELVPSAIFDGFSYVAMGHLHRRQHAGGRVWYSGSPLPYSFSEADQPKGV LIYDSQTDTVTKRDIQPLHPLQVCKGSYADLKERMLKHTVPDHAYVKIEVTDLPVSYEML DYFRQGYENLLQLSGKSMEQEQTNITIRLQDLETISDLDIVQQFFQDYYGEELSEAARQL FLQAQQKLEKEEMYAT >gi|312957472|gb|AENW01000004.1| GENE 7 8299 - 9066 748 255 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400900|ref|ZP_06645045.1| ## NR: gi|293400900|ref|ZP_06645045.1| hypothetical protein HMPREF0863_01185 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 251 1 250 256 153 39.0 1e-35 MKNIKTYLKKNGFFVFLLTVILLIIIALSVYIFVNTQAQQEPVKPVVTTPEPAPAKTTAE ITQFEGEYRKDLRYIDVTWSYEKHSSTINSVELYINNTYVDNVSDYSSYQISKDAYNYAT GENVLRLILNLSNGKTVEKKTKVFVNYVISMEQSVRQVGNATEVTLKYQYDKVHPVDVPS IFITDASIVSGEIKYIGTQTKTRDGSVYAETTYQINWPEAVVTYQQFDVRWSFKDIQYSK DFLAEKGKAVEQATE >gi|312957472|gb|AENW01000004.1| GENE 8 9253 - 10089 1245 278 aa, chain - ## HITS:1 COG:Cj0772c KEGG:ns NR:ns ## COG: Cj0772c COG1464 # Protein_GI_number: 15792110 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Campylobacter jejuni # 33 272 22 255 257 191 46.0 2e-48 MKLKTLAVGLCTIALLAGCGAKGDDAKSEKEDKTIRIGASVTPHAEILKHVKPALEKKGY KVEIEEFTDYVKPNQALVDDELDANFFQHKPYLVDWAKKANVSDKLTSVFAVHFEPLGIY SNNHTSLKEVADGQKISVPNDPTNGGRALKLLADNGIITLKEGKGVDATKQDIKAYNKKV EIIEMQAETCATSLPDVDFAVVNGNNALNAKISDKVLVTESKDSEAAQTYANIIAVQTAH KDDEKIKDLIAVLNTEDVKKFIEEKYNGIVVPLVPVNE >gi|312957472|gb|AENW01000004.1| GENE 9 10260 - 10940 1034 226 aa, chain - ## HITS:1 COG:VC0906 KEGG:ns NR:ns ## COG: VC0906 COG2011 # Protein_GI_number: 15640922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Vibrio cholerae # 21 226 19 224 225 155 48.0 7e-38 MLELLNQFVPNIMDKLPDFWTAILETFIMLGIVGVISLLIGTLFGVIMVVTKKEGILENA ILYFLIGKVIDFFRAIPFIVLIFLIAPMTRAIVGTTIGLRGAMLPLAVGAIPFVARQIES ALSEVDNGLIEASQAMGCSPLEIIFRVYLKESVPGIIRATTITLITLIGYIAMVGVVGGG GLGDFCIRYGYNSFQFDVIYVCVAVLLLITSLIQGIGNFAIRKTTH >gi|312957472|gb|AENW01000004.1| GENE 10 10934 - 11968 1358 344 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 340 5 347 354 328 50.0 9e-90 MIRLEHVSKTFDSRAGNVHAVQDVTLTIQDKEIYGIIGFSGAGKSTLVRCINLLERPSRG AVVIDDQDITKMKDKELRAMRKKIGMIFQHFNLMRSRTVYQNIAFPLKGSGLSKAEMDQK IRRLLELVDLSDKVDAYPSQLSGGQKQRVAIARALANDPKVLLCDEATSALDPQTTKSIL KLLKRVNEELGITIVLITHEMAVIKEICDRVAVMENGYVVEEGSIIDIFSKPQAEVTRNF IASTSNAHRVQEMLDAGASVTRLEKGQRMVKLNYDSVSTSKALISEISRRFLVDTNIIFG NVEIIKNTPLGDLIVILSGEEAHIDQALAYLKAHEVGVEVMKSC >gi|312957472|gb|AENW01000004.1| GENE 11 12347 - 12811 638 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400905|ref|ZP_06645050.1| ## NR: gi|293400905|ref|ZP_06645050.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 154 1 154 154 236 79.0 4e-61 MEIIQHEQQKHNILLTSDYCPNQAMINEFQTIFFTCKLQRIELCEKELKDFIVDDGARFL MLHVTIRNITNEILTMYKDDFMITFDNEGPFEAEDNFGIRNQLSDEYALKPQEEISGCLV FIISSSAKKIMLSYTEYFDDESEGKTYKLKYKIG >gi|312957472|gb|AENW01000004.1| GENE 12 12869 - 13615 579 248 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400906|ref|ZP_06645051.1| ## NR: gi|293400906|ref|ZP_06645051.1| imidazolonepropionase [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 247 1 242 242 181 39.0 5e-44 MSVKKRATLLIINLEKIYTMDMVNKHPLVFQHAFIAIHHERILAVGCGSWREYADKDTRI LDGRGHIAVPGFIEVEAQLSTASERDGLRRQLEEGMAYMRNGTLTLACRGGGAAALREQP CFEILDANPACIPVMYPYASLFQKNKKRLCRFCISAAGNYAIQDQLCAAQLMGMAEVYDA WTLLQALTVWPARALDRGELGHIQRNAQADILLFAHTDIHALFHTLGNRYLAQVIKKGIR FFPDILVS >gi|312957472|gb|AENW01000004.1| GENE 13 13704 - 14591 871 295 aa, chain + ## HITS:1 COG:no KEGG:GTNG_0200 NR:ns ## KEGG: GTNG_0200 # Name: not_defined # Def: esterase # Organism: G.thermodenitrificans # Pathway: Metabolic pathways [PATH:gtn01100]; Biosynthesis of secondary metabolites [PATH:gtn01110] # 69 215 53 208 232 86 32.0 1e-15 MLDWLKHLLKKEELPPAVQKPVIITIHGYGRRRRNEFDNFAAWGKQDGFDIIQFDMYDLF DEQDHDWMQWVSRAKEVVDSYRDSGRDIYLAGFSMGGVIASYLAVVCPVKRLLLLAPAFS YMNVDIITGVLTKSASSLMGNEKKEEIQLPRAFYGAFTELVKNLKKYIGFVECPVFIIHG NADEVISVKSSLWAYNKIPHSRKKLILLHDGHHRLLMDPEVSWTCYQNMKLFFEGVLLPD NEPVMAEDIMGALLEEKKRREREKQSQEPALNPLRVQTDESQHTDSCQADAGAKI >gi|312957472|gb|AENW01000004.1| GENE 14 14782 - 15822 1214 346 aa, chain - ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 1 260 1 257 343 159 29.0 7e-39 MGFSDLLMGQFIDVIENDKDMSHLIVLKYQRNGRDNEIKQGARLIVRESQAAVFMSKGEL ADVFSAGSYTLNTENMPILSTLQSWKYGFRSPIISDLFFVSLKALTDNKWGTRNPFIIED PTFGVVRVRGFGTFSLRVVDVEKFMRELVGVQMIYQTDDVIEFVRSIVIESLIDVIAEEK IRVVELASKLREISEAARDSANEKMETMGISLLMINIENISLPEEVEKFIDEQSGINLVS GNMQNFQQWQQSRAMRDAAQQSQGIAGIGAGFAFAQQMNTTAAQPQEPVVKEVIRIKCPN CGELNKEDAKFCCECGTSLITKKYCPQCGGEVETDSKFCSTCGQKL >gi|312957472|gb|AENW01000004.1| GENE 15 15835 - 16197 435 120 aa, chain - ## HITS:1 COG:BBQ01 KEGG:ns NR:ns ## COG: BBQ01 COG2314 # Protein_GI_number: 11497373 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Borrelia burgdorferi # 57 111 33 87 89 61 52.0 3e-10 MKCKQCGAEIENSRCCPYCGSENADYDAAADAIQQDEARQNIPGQGRGREVYDSDKSKMV TFLLALFSGPLGLHNFYTGRWGRALFYMVTMGFLMFGWLYDLFMIATNKFKDANGDYIVR >gi|312957472|gb|AENW01000004.1| GENE 16 16377 - 17042 894 221 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400909|ref|ZP_06645054.1| ## NR: gi|293400909|ref|ZP_06645054.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 5 218 3 216 222 317 78.0 3e-85 MQDKLKRREILLKRILYICAAVYIVTLLYAFYHNYTVRDMNALGMTFVAVLTPLIVPVAF KLLHFKPVYEIYIVSTIFTYFASLIGSSYHWYSYLGFDKVLHFSSGWFITTLAVILYFYL KKTNEFPDKKDYHVFLVFINAVNIAVGEIWEFYEYAMLIFFNNDCINHYSQGVHDTITDV LCATVAGILLTLLIMRYHKTGKGNFFTNVYEKFYERNIAGK >gi|312957472|gb|AENW01000004.1| GENE 17 17032 - 18513 1785 493 aa, chain - ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 7 490 6 487 489 580 55.0 1e-165 MKSLDYKFDFRDERNLSLVMDFYELTMSQCYFNSDHKDRVVTFDLFYRRNPDSGGYAVFA GLEEIIGYIQNLHFEDSDIAYLRSLNRFNDEFLEYLRHFIFTGDIFAVKEGTPVFPYEPL IRVKAKIIEAQLLETAMLLCVNHQTLIATKAKRIVKAAQGRAIMEFGARRAHNFDAANYG ARAAFIGGVAGTATTYAGQKFGMPVLGTMAHSFVQSFDCEYDAFLAYAKTYPDSCTVLLD TYNTLKSGLVNAIRVAKEYLEPNGYRLQGVRIDSGDMAYLSKKIRTALDAAGMEDCNIVI SNSLDEYLIQSLISQGAQINSMGVGENLVCSKSAPVFGGVYKMSSIFDGDTMIPKIKVSE NVEKVTNPGYKDLYRIYDKESGKAVGDLMTIHKESLDPNRDLTIYHQMNSWKNKTIPGGS YVLRDLLDPIFLNGELVYEVPDLQEIRAYSEQEFSCMWDEILRFEYPQTYYVDLSKQLLD LKLKMLEDVKHAG >gi|312957472|gb|AENW01000004.1| GENE 18 18516 - 19142 754 208 aa, chain - ## HITS:1 COG:CAC1778 KEGG:ns NR:ns ## COG: CAC1778 COG1335 # Protein_GI_number: 15895054 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Clostridium acetobutylicum # 1 201 1 212 216 111 35.0 9e-25 MARVNEQFLEAYEPLSMKELKDPIIFVVDMIEGFVHEGALHDEAINAVTVHIEALIKDAQ QRVIFIADSHPPKTREFNSYPTHCVIGTTESEVIQELKPHVQELMRKNSTNTFTCPDFQS FLTERMDSYRDIVITGCCTDICILQFALCLNAWLNEHNKTDQRIIIPLSCVDTYHIEGVH DAVSCNEFSIRNMEVNGICIVSSLERED >gi|312957472|gb|AENW01000004.1| GENE 19 19342 - 19839 300 165 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHIKTKRSKTKPQTVADRIRSNAEEQAQIDLSRIAISYNSPQPEKMHANAFLQNHHIYI KDQNPATLAHEFGHIIQRSHNTIPVSQRQLGKSVNQNHALEKEADMYAEGLLTNTITFPQ KKGNTLRAISQNVIQFQGAEEQAITKTEGIPRANVVCDVDLYKNI >gi|312957472|gb|AENW01000004.1| GENE 20 19961 - 20593 248 210 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSTYVTEQTGVMKCEEAADMIYTNLRRQINFKKTMFYCSVIPYIESHQRPSLEHAIIIT SSKDIKPFLSKADSCGYSILTDPNEILKNALVLDGWRHSMCSLTAFLQGANPWTCVHSSQ SSSTSKLFFKVLTTRMAEPMFPTFLFESQKQFLDTQIQSFNENNDPLRDKKIADNRSAYE PYDYHLQKDGIVTWVEKKPRRKRKKAFSIV >gi|312957472|gb|AENW01000004.1| GENE 21 20763 - 21236 579 157 aa, chain - ## HITS:1 COG:SP1384 KEGG:ns NR:ns ## COG: SP1384 COG4894 # Protein_GI_number: 15901238 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 3 149 8 155 165 79 31.0 2e-15 MKLLFKQRMFSWFDSYDIYDEAGNSVYTVEGKMSWGHRLVIYNAYKEEIGEIKEEVFTFL PRFRMYMNDECFGMIEKELSFFKPKSHLSCNDWAIYGDLMEWEYDVISEREGLIMHASKE LFHFTDTYVLNIQQEGHALLALMIVLAIDAAKYSHNG >gi|312957472|gb|AENW01000004.1| GENE 22 21450 - 23561 2017 703 aa, chain - ## HITS:1 COG:MJ0566 KEGG:ns NR:ns ## COG: MJ0566 COG0370 # Protein_GI_number: 15668746 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Methanococcus jannaschii # 2 695 3 660 668 382 33.0 1e-105 MNYHVAFVGNPNVGKSAWINALSNADFKVGNWPGVTVEKKEANVCWGGDSYHIIDLPGTY SLTNNGNEESITAAYLQSQQVDLIVNVLDATNLQRNLMLTLFLRELQIPMLLIFNFMDEV KDYGIHIDTAALSRRLGMEILAYSAFDRRHYREVRQAIQRQVEQRTVFYHPLLNEEEDEI YTSLYTYIEQHGPSHAEADARLLHHLAMGCMREDVLVMKQLEAWHMDPVVLQKLCRDMNE ENVRAGYCRAVESLMHNVVQDPKKRYAKSERIDAFVLHKWLGLPLFLVVFSFLLLFVFQA SAPLNAYIDYLLQDVLARYVSFALQWAPSVVRQFLLQGILAGVGGVLVFVPLMALLYFVL SLLEESGYMARIAFLLDRLMNTFHLSGKSFVSLMLGFGCNVPAIYATRTLDNEQQKRLTA LLVPFMSCGARLPVYVLFASAFFPDKAALMMLSIYGIGILLALVLALLASRFPIFHDDAM MVLELPPYRLPSLRVVLHKVKEEVKSYVRKACGIVLWAMVILWGLTYFPSGNVETSYLAQ GARLVQPIFAPLGFGDRWECVAALPGGIIAKETIVGFFDTVLQTPPSNAGATINAAKDIR EILHRGGSALKESATFFLHTDVSVKPQNDAQVSHIRRLWTTPDAGIRAFSFMVYVLLSIP CIMTLQAVYHEYGKKLLLLSLAVMLLVPYLASLFIFQFFSLFL >gi|312957472|gb|AENW01000004.1| GENE 23 23558 - 23785 313 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400913|ref|ZP_06645058.1| ## NR: gi|293400913|ref|ZP_06645058.1| ferrous iron transport protein B [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 74 1 74 74 76 51.0 4e-13 MKLCDAAVGKTMVVTNVHMCKKEKDRLFYLGIYPGMQIRKLRSAPMQDPCLYFAAGNQLI LRNKDAACIEGEVLE >gi|312957472|gb|AENW01000004.1| GENE 24 23973 - 25304 1650 443 aa, chain + ## HITS:1 COG:CAC0737 KEGG:ns NR:ns ## COG: CAC0737 COG0334 # Protein_GI_number: 15894024 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Clostridium acetobutylicum # 1 441 1 442 443 595 66.0 1e-170 MAKLDYVKEAVVKRNPNDAEFIQAVDEVLLSLEKVAGKHPEYIEKGVFERIVEPERQIIF RVPWVDDSGKLQVNRGFRVEFNSAIGPYKGGLRFHPSVNISIIKFLGFEQIFKNSLTGLP MGGGKGGSDFDPKGKSDAEIMRFCQSFMTELCKYIGPDTDVPAGDIGVGGREIGYMFGQY KRIRNEFTGVLTGKGLNWGGSLARTQATGYGLCYFTEAMLQANGTSFQGKKVVVSGSGNV AIYAAEKATQLGATVIAMSDSSGYIVDENGVNLDVMKEIKEVKRGRIREYADAVAGATFH ASESIWNTPCDIALPCATQNELHKKDAETLIKNGCIAVCEGANMPTTPDAIEVLQANNVL YAPGKASNAGGVATSGLEMSQNSARLSWTFEEVDAKLKDIMENIFRTVSDTAMEYGLGKN YMAGANIAGFIKVADSMIDQGIV >gi|312957472|gb|AENW01000004.1| GENE 25 25486 - 25755 131 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKKRILWIIIAIFLVYTCCTYSGAMKLRAFLITKDLSVYMNSIHVSAFGKPYYVFQKAM LVHDTGNAIGVFECHRYTLFVHVEYVGFP >gi|312957472|gb|AENW01000004.1| GENE 26 25778 - 26350 711 190 aa, chain - ## HITS:1 COG:BS_yloD KEGG:ns NR:ns ## COG: BS_yloD COG0194 # Protein_GI_number: 16078631 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Bacillus subtilis # 2 182 43 223 244 206 55.0 3e-53 MKKGLLIIISGPSGVGKGTVRNCFMNDESLKLAYSISMTTRSPRQGEQDGVDYIFTTKEE FEQAIHDGELLEWAEFVGNYYGTPMSQVEKLRKEGKNVLLEIEVQGATQVREKCPEALTI FIIPPSMEELEKRIRGRRSEPEEIVQQRLAKASKEIKMVNNYKYIVCNDDPQLAADMIST IIKRHMEIDE >gi|312957472|gb|AENW01000004.1| GENE 27 27211 - 28875 1763 554 aa, chain + ## HITS:1 COG:BH2516 KEGG:ns NR:ns ## COG: BH2516 COG1293 # Protein_GI_number: 15615079 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Bacillus halodurans # 1 543 1 566 570 331 35.0 2e-90 MALDGLLLHQVQKELQSFLPAKLTKLQQISDTELLFTIRTPKGTRRLMISLHSVYNRINL TQESYTTMETPGNFLMLLRKQIDGGILRSLNQVGLDRILHMVIEARDELGDIHDRHLYIE LMGKYANMILVDEEGHILDALKRIPPFENNRRTIHPGALYQLPAPHTGKQDPYHYEKIDP SESFTKQFHGFSPLLSREVQYRMAQGENFDEILEQIRTSDTLYLSDVQDKTQFHCIPLTH LEVEARQYPLMKGMDLLFFQKEEKVRIKQQSGDLFRAVRKELHKNTSKYPKLQQTLEEAM DCDKYREYGDLLFAYMGSIERRETVTLPSFETGKDIHIPLDMRFDIKGNANRYYQKYHKS KRAQAILQEQLALCEKEIRYFESMEVQLEQATVQDAMEIREELARQGYVKAVKTRIRKKK KQELPHYETFAFDDVYIYVGKNNLQNDYVTWRLGKKSDMWLHTKDVHGAHVVITCEQPDE ELLRNAAMLAAWYSNARYSSSVPVNYCTIRQLKKIPGNKGSFVSLSNYKTIYIDPEPAQI QKLIDEHLITQKKH >gi|312957472|gb|AENW01000004.1| GENE 28 29424 - 29669 197 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQEFLPDVVQVVLLVLAGLYLINIGVLSAMMFSTLSNIGLTGANTEYILPWDLLGIALCI VLAEGVLFAGIHRLRLYFQSR >gi|312957472|gb|AENW01000004.1| GENE 29 29672 - 29992 338 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQKSQKLTASILLVACITYSLFFPDSVNTALVFVLYACLLMYLFSKRELPVLSRMKIMIA AFMFSMLMTAVCIAAAELLRGYFLFDGVLMGCLMFLAMGAVIQTFF >gi|312957472|gb|AENW01000004.1| GENE 30 30271 - 30570 267 99 aa, chain - ## HITS:1 COG:TM1112 KEGG:ns NR:ns ## COG: TM1112 COG3450 # Protein_GI_number: 15643869 # Func_class: R General function prediction only # Function: Predicted enzyme of the cupin superfamily # Organism: Thermotoga maritima # 3 86 2 86 89 70 45.0 5e-13 MKDVYIRKPNDKERRLLESCPIWEHEPAQWNAEYDERCETCLIIEGTAVVSGSDGQSYAF TRGDLVTFRPNMSCVWKVLEKIRKHYLFDMDTDEHSASS >gi|312957472|gb|AENW01000004.1| GENE 31 30582 - 31082 495 166 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 160 161 119 35.0 2e-27 MARIGLVRIDSRLIHGQVCTQWLYRTNSKKVYIVDDEGASNSFLSSIYKMACPVGVELET ISTEEAGKRWQQDQLGDLEPIFVLFKNMPMAYKAYKAGFRYTTLQVGGIGGGVGRKNIVG PISFDDNDAKMLDEMFQDGLEAYFQPVPDNQKVSWIDVKAKHYPNL >gi|312957472|gb|AENW01000004.1| GENE 32 31099 - 31962 795 287 aa, chain - ## HITS:1 COG:lin2239 KEGG:ns NR:ns ## COG: lin2239 COG0191 # Protein_GI_number: 16801304 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 281 1 283 284 164 36.0 2e-40 MLVSMLEILEKAKEGGYGVLAPNVFNEDSVRVCIEAAVELDSPLIIDVLPDNHKDIVSFG KLICSMANEVRIPIALNLDHGDSFEACVKAIYGGFTGVMVDRSALSFEENARQVAEFKNI CAPLGITVEAEFGQIADGCDYEEKRDEYLTDPVKAKEFVEKSGCDCLAVSIGEAHGEYTG KGPDIDFERLKEIKNLVDVPLVFHGGSFSGFENIAECCRIGTQKVNMGTDAYNYGLDCLF HDGRYQNGENIGARMAGDIMWAGYKERVMDYMKVTGSVGKNWIKIEN >gi|312957472|gb|AENW01000004.1| GENE 33 31967 - 32923 706 318 aa, chain - ## HITS:1 COG:SA1143 KEGG:ns NR:ns ## COG: SA1143 COG2267 # Protein_GI_number: 15926885 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Staphylococcus aureus N315 # 29 309 28 301 304 68 25.0 1e-11 MKLQEYRFLSGDGEDELYGCAWLPDGPVKGYIQILHDLYDHIERYMHLLQFFAEHGYAAF GHDLVGHGRSVYRNGPGQISARHTYRHFIEDAETMFYLVVKDAMPKKEQKKSYIHALIGF GFGSMLAKQYAIMTSNCNALILCGDYGFPSLYRKAMNIYAKECRKKADTEPAEKTEDYIL SHYGIDNMDTFLEERVSKPREQKKLKRDACCQLSYSMQYMLNRITLCSLYMTEDWISQLP EYLPILFMSGYEDVFSNYTRELDVVIRKLNYAGAENIFYKYYEHKKHELLFEDAAVNVMQ DMLKLIRRLEEHSIERKE >gi|312957472|gb|AENW01000004.1| GENE 34 32928 - 33230 305 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWKEYNRGSVMKNKKLLFVKLTGLTLAIYWFISKGGTQSVDTSFGLQEKREAFDMFDVAS SWMIWLVIAYLVFVALRNLYSKNVRKPKSNMQKKYAKLRR >gi|312957472|gb|AENW01000004.1| GENE 35 33190 - 33816 660 208 aa, chain - ## HITS:1 COG:SMb20313 KEGG:ns NR:ns ## COG: SMb20313 COG2376 # Protein_GI_number: 16264047 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 19 205 22 209 213 80 30.0 2e-15 MKTEGIKRVFHAWNLIFQEHVEQLTALDSAGGDGDLGVVMRDGFRIADEFVTDSDEHDIG KMIYMAGKKFNSIASSSMGTLISSGFMKIGKQLKGKEELKDAELAVLFQAMIEGVMTLGG AKEGEKTFLDALCPAQRAYAEHVDEGKARALQCAVTAAREGVEKAKMMQARHGRLAFRQE NSIGMVDPGSVVAALYVEGIQQGLRDEE >gi|312957472|gb|AENW01000004.1| GENE 36 33813 - 34835 870 340 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 334 6 335 337 313 49.0 4e-85 MKKFINQPERFIDEMLYGLYAAHPSYYTCVNEDAHCLITKHKIAGKVGIATGGGSGHLPL FLGYVGKGMLDGCSVGDVFQSPSSEQMLDVTKAIDSGAGVLYIFGNYNGDIFNFQMAAEM AEMEEDIEVCLSIAGEDVASGPRAKEQEKNIRRGVAGIFFVYKCAGAAAAEMLPLDEVYR IAEKTKLLVATMGVALSPCTVPRIGHPSFTIADDEMEIGMGIHGEAGLRRGKICSADDIV KEIVPPVMQDLQLRHDDEVCVLINGLGATPLEEQYLITGLVHRLLKDAGIRVHRTYVGEY ATSLEMTGLSISLLKVDEELKRLMDAAADTPMFKQFGESK >gi|312957472|gb|AENW01000004.1| GENE 37 34863 - 36497 1971 544 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 262 542 15 286 286 151 32.0 3e-36 MTLLQAILLAMLYWLAAGEIFVPFTYCFCDLMLISLLTGVILGDPVKGCIVGGTIQPLYL ALTAVGGAMPVDKEAAGIVTTAMVITAGISLDQGLVISSAAALIMAQLHTVKRLAMVWTV HHADKAVETGNVKELTRTSLLYGPLIRAVIFLVPMTIVLKYGVNSLGVLMNGLPDWANNM FSLAGGLLPALGFAMVILVIGKGQLIPFFIAGFFFAQYSGLGAVPGCLLGIFIAWLYTIF TKKETDNGSLFADLLNLKNAESKATHILSRKTLKKVWFNWRLHVCHVDNVERLQAMGMCL TMAPALEELYPDDKEEQIKGLKRHMQFFITENMIGGIIPGIITSLEEQRAIQKRDQVPED QLISEDLINSVKNGMMGPFAGVGDTLNYATLKPLISTFFMGFAQQGMLWAPIVDDILLYV ILVSEGKFMFNMGYKLGTDSAMNILQNNAVQKIVTFFSIVGLFVMGTMAAQNVNVAVIYE IPYGAKDMISIQELLFNPIAPGILSLLAVFGVYAYLKKGGTVLKVTLVLLVIAIALGGLG ILGV >gi|312957472|gb|AENW01000004.1| GENE 38 36543 - 36938 427 131 aa, chain - ## HITS:1 COG:ECs5002 KEGG:ns NR:ns ## COG: ECs5002 COG2893 # Protein_GI_number: 15834256 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 121 1 119 135 63 31.0 6e-11 MKHIVIGAHGNLAEAFLETVRMITGTEQTSCIHAIGMKENMDPQAFIKKAEELIDEDRDG EYLLLADLFGASPCNSLLMAFQHCRYRLVTGLNLGMVLEVLFQFDDMSLEEAAEHMVEIG KGGIQNVILPA >gi|312957472|gb|AENW01000004.1| GENE 39 37175 - 37993 495 272 aa, chain - ## HITS:1 COG:srlR KEGG:ns NR:ns ## COG: srlR COG1349 # Protein_GI_number: 16130614 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 23 248 5 231 257 115 32.0 9e-26 MRKENDGHTVVCRSWGMEKRLEKRLDEISNYLLSHGKASVKELSDCFGVTMETIRKDLEF LQRKGILFRTHGGAVLRNSFTDVPIDVRTQEKIEIKKAICMEVINFIHDDDVVFVDPSST ALPLGKLFSFRKNLLIITNCFEMMNELKESRNEVVFLGGKYSRSGNRTEGQFVSDMASRF SYDAAIFGTDGCLGFDGPGTQTEDAMFLNEIILRRSKCKILITLAVKFERTSRYQYGVFQ DFDALVTDKIDRDLNHKLKIGKIIEVNRFDTE >gi|312957472|gb|AENW01000004.1| GENE 40 38121 - 39137 1303 338 aa, chain - ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 12 338 3 327 327 399 61.0 1e-111 MAVEDLIIPKYYENKLDIISTEIAIKYVKDLFERRLAHHLNLMRISAPLYVSKSSGLNDD LNGTERPVAFDIMEIEGEDYQIVHSLAKWKRMALKRYNLNVGKGIYTDMNAIRRDEVLDN LHSCYVDQWDWEKIISRENRTMEFLKMTVRNIMKALKETEKELDIVYENLMPFIQEDVYF ITAQELEDRFPDLTPKEREYEIVKQHRTVFLMKIGDTLNSGEKHDGRAPDYDDWALNGDI LLYYPVLDTVLEISSMGIRVDAKALAEQLKKAGCEERKNLPFHKMLLQDELPLTIGGGIG QSRICLILLNKAHIGEVQVSQWSDAMREECEKHNIVLL >gi|312957472|gb|AENW01000004.1| GENE 41 39427 - 39924 185 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229883981|ref|ZP_04503445.1| acetyltransferase, ribosomal protein N-acetylase [Sebaldella termitidis ATCC 33386] # 45 162 31 151 166 75 37 1e-12 MQKGAYYIMVMNMTVMVRPWDVEDAMELHSLSMHPYYLKKRVWKFLYPDTFLNAVSTIHF YQHADPQRYLFRAVELDGSVCGFLECEKKTSSSAELSYWLGVHYWHKGIMQQAVRALCEE AFDTLQVLSIYALVEKRNTASMHVLEANGFQREEFGKLYMFKKYK >gi|312957472|gb|AENW01000004.1| GENE 42 40387 - 40644 384 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSLKKVLLTAIASFLAFAILAGIFADLLLLMLGLTGVSFDMYRIQICLAFLCSVMVTCT YIIIRKIYELSLDFSRWKNKDKMPF >gi|312957472|gb|AENW01000004.1| GENE 43 40703 - 40918 129 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRPYCGKEMKAGFVQAASNSIFSEKKHLVRMQPANDQEVLLAEQTLYPAAIAAYYCTVC HRVIMNGEERL >gi|312957472|gb|AENW01000004.1| GENE 44 40999 - 41370 444 123 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0675 NR:ns ## KEGG: Cphy_0675 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 7 111 9 128 264 72 34.0 4e-12 MKTWGYMVLLFSICILGGCKDTEAETVQGKIVKAESSEQLLMVNGQLYYNTKKTDNESLR CGMMDGEIDSMVGRTEIPKKDNQSNFAIGISYQIGDQEIELAMDGGWVIFKPWKPVVPLD IEE >gi|312957472|gb|AENW01000004.1| GENE 45 41405 - 41851 397 148 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0953 NR:ns ## KEGG: Cphy_0953 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 13 143 1 131 138 138 45.0 8e-32 MKKTIEWQEDRFMYERMLNKQEQPQYNEMCMHCKECGELFAGLNTWLMETFATHQDITFP YGNHYGWGIAHRKRNKLMCNVFPEAGAFTVMLRLSDTQFASVYEQLQPYAKEYVDNRYPC GNGGWIHYRVCEEAHMEDIQRLLFLRCD >gi|312957472|gb|AENW01000004.1| GENE 46 41956 - 42264 482 102 aa, chain - ## HITS:1 COG:STM1458 KEGG:ns NR:ns ## COG: STM1458 COG2878 # Protein_GI_number: 16764806 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Salmonella typhimurium LT2 # 4 93 7 95 192 58 39.0 2e-09 MVTAIVMMLVLGAILGLGLGIADRFLSVEVDERIEKVSSMLPNYNCGSCGYAGCSGLAEA LVEGEVTVVGTCKPCKPDQKAAIAEYLNTTPGPDGTCVKVKA >gi|312957472|gb|AENW01000004.1| GENE 47 42279 - 42449 199 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916010|ref|ZP_02078218.1| ## NR: gi|160916010|ref|ZP_02078218.1| hypothetical protein EUBDOL_02038 [Eubacterium dolichum DSM 3991] # 1 56 1 56 56 83 71.0 4e-15 MKALLPVLYLGALGAVYALVFYFNHKTPLPKGCEDLKAQCKGCHDHSCCNNPAHEE >gi|312957472|gb|AENW01000004.1| GENE 48 42451 - 43032 785 193 aa, chain - ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 23 192 23 192 194 167 57.0 8e-42 MNWSNLFVMLITFVFINNVVLNQFLGMCPFMGVSKKSSSAIGMGAAVTFVIVAASLVTYG LYYMVLDPLGLQYMDLITFILVIAALVQLVEMIIKKLSPSLYKALGVYLPLITTNCVVLN VTLNNITSGYNFAEMLTYSIAIPVGFTMVLYIFSTIRERLDACDTPLSWKGNPIALIVAA IMALAFSGLMGLV >gi|312957472|gb|AENW01000004.1| GENE 49 43036 - 43695 825 219 aa, chain - ## HITS:1 COG:TM0247 KEGG:ns NR:ns ## COG: TM0247 COG4660 # Protein_GI_number: 15643019 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Thermotoga maritima # 1 156 1 156 200 170 54.0 1e-42 MNRKENFTAGFIRENPVFSLYLGLCSTLAITTTLNNAIGMGVAVIVVLIMSNVIISLIRN ITPSEIRIPVYIVIIATLVKIIQMLIKAYAPSLDSALGVFIPLIVVNCIILGRAEAFASK NGVFDSALDGLGMGLGYTVSIILMSAIRQIIATGILSFDNPFDAAQNIFSIRIIPEDFAI SMFSQPFGAFCTFACLAAGLAAYKSHQQNKAKKLEKEAK >gi|312957472|gb|AENW01000004.1| GENE 50 43710 - 44228 813 172 aa, chain - ## HITS:1 COG:FN1594 KEGG:ns NR:ns ## COG: FN1594 COG4659 # Protein_GI_number: 19704915 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Fusobacterium nucleatum # 3 169 4 174 177 69 30.0 3e-12 MKKILHLTVFLALIAALAGGALAFANNMTAPVIAANELAAEKETLKEIYPDVSDDAFVKV KDNASKTIEKIFEVEGKGYIFKMKVTGYKDGTSYLVALNKDGSVYDYVAISNGDTQGLGS KVTEKPFRESLKGKDAAGEEILDDTITGATVSSKPVIEGIREAAKYQAENLK >gi|312957472|gb|AENW01000004.1| GENE 51 44240 - 45742 1939 500 aa, chain - ## HITS:1 COG:FN1595 KEGG:ns NR:ns ## COG: FN1595 COG4658 # Protein_GI_number: 19704916 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Fusobacterium nucleatum # 8 340 10 307 314 153 31.0 6e-37 MKFTFHASPNLRQKQSTQQIMLELMIGLLVVFAFSLIYYNQAYSFDHMLQAIKLLAVSLL VAFVTELAWAFFMKKDQKFDLPYIRKFMGGSFGWITAIILTLMCPISIRPYALGVSTFFA IFFAKLLFGGFGNNIFNPAAVGRAIVFATFMGATTDVITSATPTTVIASEFNWLVTNPEM IKDMMSEIGGIGKLLTGWYPGAIGETSAIIILLVGVVLSIRRVIDWRVPAVYLGSIFVLA AGIALLRGVGSYDGIPGFIWYPLVHVLTGGVVFGAVFMLTDPVTSPTSAQGRCIFALGAA IITVLIRVKANLPEGCLYSILMMNMLTPMIEKGLEGKQLALRKKATIIFSIVAVVGMGSV LLAGSVIEAKEPAPAVMLNTADKDVNKFEAKLSGKTENSDGTVTYHVESQGYASTEDPTI YNKFDITVKDDKIVTVVPTEINDTPYQGDKIDNPAFLDQFIGQDLKKDVEVEKNDAVTEA TFSSKSTVRAVEEVRKALGY >gi|312957472|gb|AENW01000004.1| GENE 52 45756 - 47048 1404 430 aa, chain - ## HITS:1 COG:FN1596 KEGG:ns NR:ns ## COG: FN1596 COG4656 # Protein_GI_number: 19704917 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Fusobacterium nucleatum # 11 430 17 441 441 243 33.0 5e-64 MSLFKGPMRQHIPGHKELSDHVDIMEVKAGSKVFIPLICGPSVNLEILVKEGDHVSIGTK VAQCNERNVVPIFASVSGTVAGTQKLMHSSLKPVEHLVIENDGLYERVRSFEPLDYKSAD RTALIDFMMNAGIIGLGGAGFPAYIKYKFAKDVKKLIINAVECEPFITADYKMIQAHKEE FVTGVAAMKKMAMAPEAVIAIKKTHPDLIQFVEEAVKGMEGFSVAAVPDVYPMGWERVLV REIMHAEYEKLPGEVGAIVNNATTAIAFGDALLTGTPIVSKTLTVSGNAIKKPVNVQVPV GVPVSEIVAACGGYTCEDVRLIAGGPMMGKTIVNDKFVIDRNMNALTILENKPFDSIACL RCGKCSDHCPAGLQPVRIAQAVKTNDKKAMEKLCAMDCIECGLCTYICPSRLDVTENVRR AKRQLMLAKK >gi|312957472|gb|AENW01000004.1| GENE 53 47356 - 48468 1220 370 aa, chain + ## HITS:1 COG:CAC2761 KEGG:ns NR:ns ## COG: CAC2761 COG1477 # Protein_GI_number: 15896017 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Clostridium acetobutylicum # 36 341 21 311 327 142 30.0 1e-33 MKKILSILLGALLLSGCSEKALHKYSMTATDIGFDTVVSFTAYTENEAAFNSYSAELKKQ FRYYDRLFDKYNSYDGVNNIKTINDNAGRQPVKVEPVILDLLKLAKAYDTISNHQFDITM GSVLNIWHDYREAGTLANQKNKESSIPSMKELQTAAKHSGWKHVQIDEKNSTVYIDDRDV SLDVGGVAKGYAVELIADQLQKDGLQHAIINGGGNIRLIGDKPDNEAWSVGIQIPNLKAQ STDSLISVKSKGDTSFVTSGDYQRYYTYKGKIMHHIIDPDTLMPARHSRSVTVITDNSGI ADILSTTLYTMSHEEGVKLINRLQKEENIQVNAIWVYDDIQKPENGTDAISVKGYQIVFS DGLKDKIKES >gi|312957472|gb|AENW01000004.1| GENE 54 48837 - 49160 144 107 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELGEEMNVFDSNNSEDASYPPHFIYNGMRYLPATVTEPDIFEAIPDSFQYVGKMKEEIA VYASRNYTGVHIKKNTKMYIGKNQNRFMLLQHPNGFIELYECIAYRE >gi|312957472|gb|AENW01000004.1| GENE 55 49518 - 50279 304 253 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFIEFFDDGTGNYTGIFSENFVDDLTKYAGNTPEDAPIISLDPQNNQELFISDNGTTIVN SKTGSVEAFRTKAEFRSASAFKPVDISDKISFFVKPQTRATSYNYMLNINILETQGSTNW YFAYVTATALRYKDKNVRASTITNYFNFGTQTALSVDNAKKYRKTKGVTYDGRYSGSIMN SSLHGYLRGGNPVHWSMDVSGGGNHALLIHGIEGSRRRVWNPWYSYSEWSVDAVTYKSAG GTTMKTRGYGMYF >gi|312957472|gb|AENW01000004.1| GENE 56 50831 - 51379 722 182 aa, chain - ## HITS:1 COG:CAC3610 KEGG:ns NR:ns ## COG: CAC3610 COG0842 # Protein_GI_number: 15896844 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Clostridium acetobutylicum # 2 147 147 293 330 68 33.0 7e-12 MQSLVYMMQYGEDKKLRRMKWILLSLVSFSSYLGGMIAFTMLSVILPAFMMLAVCRLFGA QIGFSLPVYAGLLFVLALFVIAFALFLNTLFAQKVTANMLGSALAVLASIISGGFYEVAH GGGILDTIASMLLTKAVLQLSESLEAGLTAQAVVHLGFVLLWASALFIATLLVQWMHKTA AD >gi|312957472|gb|AENW01000004.1| GENE 57 51490 - 52557 1454 355 aa, chain - ## HITS:1 COG:BS_ywaA KEGG:ns NR:ns ## COG: BS_ywaA COG0115 # Protein_GI_number: 16080906 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Bacillus subtilis # 3 354 6 356 363 432 58.0 1e-121 MNIEIIEASQKREKPDWSSDLGFGKIFTDHMFTMDWTAEQGWCNAKIEPYAPICMDPASL VLHYAQETFEGLKAYKTKDGRVLLFRPEMNARRFANSNRRLCMPEMDEEMFVEAVAAVVN YEKDWIPTAEGTSLYIRPFMFATEAAVGVHPSNAYKFMILLSPVGAYYPEGVNPVKIYVE DEYVRATKGGTGFTKCGGNYAASIAAQVKAEKLGYTQVLWLDGVERKYVEEVGTMNVMFK IDNKIVTAPCDGTVLPGVTRDSILQLLTSWGYEVEERHLAIDELMQAGKEGRLEEAFGTG TAAVISPVGELNFKGEITVINDFKTGELTQKLYDTLTGIQWGDVADTYGWTREVK >gi|312957472|gb|AENW01000004.1| GENE 58 53341 - 54237 915 298 aa, chain + ## HITS:1 COG:TM0186 KEGG:ns NR:ns ## COG: TM0186 COG3437 # Protein_GI_number: 15642960 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and an HD-GYP domain # Organism: Thermotoga maritima # 125 291 164 335 368 123 44.0 5e-28 MTVEIKHNQSFWEQGPQNAEEIHAVQQLQTGLYNIRSDTHIGITWEENERDAVFVLYMLE GEMQFQSSSEVFSLKKDDSALFSYEATAIHGISKTPCRLMLFSTSGSYQKVNATNACFEK LREVELKDIYTIGHSRRVSSLSMSIALQLDPGYDILTLGAAATFHDLGKYYTPIEILQKP GRLTPEEFSIIKLHPQASWQLLMESHGEIIAEIALQHHERMDGSGYPRGLHADAIRMDAR IIAVADVFDAITSKRSYNNPVSYEQALSIMEQEQQLYDSDVLHALHILVREKRLSISI >gi|312957472|gb|AENW01000004.1| GENE 59 54415 - 57039 3228 874 aa, chain - ## HITS:1 COG:SA1488 KEGG:ns NR:ns ## COG: SA1488 COG0525 # Protein_GI_number: 15927242 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Staphylococcus aureus N315 # 5 871 3 875 876 1040 57.0 0 MRKTLDTKYDHLHVEMDHYKSWIDHGYFTAGDKSKDPFCIVIPPPNVTGKLHLGHAWDTT LQDIVSRYKRMQGYDMLWLPGMDHAGIATQAKVDERLKSEGISRYDIGREKFLERAWEWK EEYASTIRKQWAKMGLSLDYSRERFTLDEGLSDAVRRVFVDLYNDGLIYQGERIINWDPQ AKTALSNIEVIHKEIEGAMYYFKYKVVETGKELVIATTRPETMFADQAIFVHPEDERYKN IVGMHVINPANGEELPIMADDYIDMSFGTAVMKCTPAHDPNDFALAKKYHLAMPICMHPD GTMNEMAHKYAGMDRFACRKALVADFEKDGVVDHIEQHMHQVGHSERTGVIVEPYLSKQW FVRMEPLAEEVLKNQEIEEQKIHFYPQRFEKTFHQWLENIEDWCISRQLWWGHRIPAWYH KETGEIYVGMEDPQDLENWIQDEDVLDTWFSSALWPFSTLGWPKETDDLNRYFPNDVLVT GYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDAQGRKMSKSLGNGIDPMDVIADHG VDALRFFLTTNSTPGQDLRYIDEKVEASANFINKIWNASRFVLMQIPEDMEVSDIDLSNA SMIDKWILKRFNEVLENVTANMEKYEYALVGNELYSFIWDDFCSWYIELSKAGLSSDDET LRRATQSTLVTVLSGIVRMLHPFMPFVTEEIYLAIPHTQESINLEAWPCAVDAAMSEEEM TAIRQLITMIEAVRSLKVDYNLKPSMDIEVIIRDENGKNMPSVSYINAILQKMCHATWID EDSAVEMAVRPILNGTLNVPLAAIINVEEEIEKLSKEIKRLQQEIKRGEGMLSNPNFVNK APEAKVNAEREKLEGYRSQYAIVEKQLEEMKKKA >gi|312957472|gb|AENW01000004.1| GENE 60 57054 - 57623 229 189 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227395847|ref|ZP_03879169.1| acetyltransferase, ribosomal protein N-acetylase [Haliangium ochraceum DSM 14365] # 5 157 13 162 193 92 35 1e-17 MRLDMPCVETAHLLLRPVEEGDVCDMFTYYSDPLVMRYLSLHPHTDIEETLNSIRSYFLT WEKRGVPQAWVMVHKHDDKVIGNLDIHTIDGDIGEIGYLMHPDYWNQGLMREAVSALVKA GFAHVGLRRMEAYVAVEHPASAAVLKHCGFVQEGILRKLALLSDGRYHDMVLMSILKEDI LTESFRLDK >gi|312957472|gb|AENW01000004.1| GENE 61 58381 - 59100 973 239 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401445|ref|ZP_06645588.1| ## NR: gi|293401445|ref|ZP_06645588.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 237 1 228 228 150 41.0 7e-35 MKTMKIEKELQFADQVKEPRSLQVRESLEYHKEAEGIRAVGPLRVQGSYVNDEGELQEYE EVLDMDVLAPNHKLSQERFYLDIQEYQSVPANGGLNLTILMGIHGLQEQPAPVQQTVVEQ DNVQPEFSASRQPAPAQPEMQDNTLHTLEQLSATGSQENEEVAQEEETPQESDTTAMSEF EDLFEDDETTYTSYRMVVARGNDSYGTIAQRYDVKEDALRLANNNKEVNERTLVILPSV >gi|312957472|gb|AENW01000004.1| GENE 62 59296 - 59922 800 208 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00925 NR:ns ## KEGG: EUBELI_00925 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 206 1 206 206 293 66.0 4e-78 MITIERTSVMNFENAIRGARNPMNSWNRMDSFYDEQGNFIMGPNDLNLAQRLARAGSDHR KFIRQIFVSVDFTAPLYWWKEYDTYKVATVANSTSTMHKIASKPFTLDDFSHERMNTQAQ EALAHTVSVLEDLRKDYLETKDKETWYSMIQLLPSSYHQMRTCTLNYETLMNIYYARRNH KLDEWHTVCDWIASLPYAKELILAVEEK >gi|312957472|gb|AENW01000004.1| GENE 63 59970 - 60551 436 193 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20252 NR:ns ## KEGG: EUBELI_20252 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 48 190 52 188 190 82 37.0 1e-14 MKNDRWMMLCCGGILLCVCVSPWLPYTEWGILLFSVLSALRLYFANDVITGLDQANPKNR TVQEMAVVCMFFIMMMAVIAALYACGQLQEAVKDKLQFSMVLFLVLVYGNAAPKLPCNRH LGLRLPWTTADENTWRYAHRICGYMSFPTAFFMLCGFAMHHTGVQATAFGFGFVGIPAFL SYRYDQKQKKDRI >gi|312957472|gb|AENW01000004.1| GENE 64 60541 - 60831 326 96 aa, chain - ## HITS:1 COG:BH0945 KEGG:ns NR:ns ## COG: BH0945 COG0640 # Protein_GI_number: 15613508 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 3 74 5 76 99 87 56.0 5e-18 MDMFKAMADPTRRRILQLLSEKNLSAGEIAEEFTMSKPAISKHLDILKTSELITCEKQGQ YVIYAINTSAVEQMYCRFLDVFDGMSFHGKAQKHEK >gi|312957472|gb|AENW01000004.1| GENE 65 60836 - 61120 316 94 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVFLKKYGAYGIPVCLLLVSLLLYPRLPNELPMQFSLSGEVNRTMNKEFAIWCIPVLEAV ILLYTDCTDNRIAGLAIAILLTIIQLGIMLLVMR >gi|312957472|gb|AENW01000004.1| GENE 66 61713 - 61985 308 90 aa, chain - ## HITS:0 COG:no KEGG:no NR:no METLLEIIMEIVMEGTLYTAGNKKVSLWIRIPLILVLLLFFGFIIAGSFLTGIIIVKKEG FFKGLIMLGISVLMLGVLIKLIVDYRKNWK >gi|312957472|gb|AENW01000004.1| GENE 67 62264 - 62554 160 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDCLCIQTIAKSVILPCDVYADGEYAALHRRSGMLLLCYFEQDSIQVEHFLQQHRNESS LCIPYCDIDHIDVPISRIPYGSLYGVRYHITLNFIV >gi|312957472|gb|AENW01000004.1| GENE 68 62726 - 63316 673 196 aa, chain - ## HITS:1 COG:SP1568 KEGG:ns NR:ns ## COG: SP1568 COG0218 # Protein_GI_number: 15901411 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pneumoniae TIGR4 # 5 191 6 192 195 203 52.0 2e-52 MIQFQKAELVISAPDKKSWPDTTLPEIVLAGRSNVGKSSFINAMCGRKKLAYVGNTPGKT RLLNFFNLDDKYMFVDVPGYGYANISKTQLIKFGQMMEDYFSERTQKKGVVILVDARHKP TDDDMTMLEFARYYEIPVAVVATKCDKVPPTKRAHHFANIRKTLKLNADEPLFPFSAVEK QGMEEIWSYLIPLFTS >gi|312957472|gb|AENW01000004.1| GENE 69 63318 - 65642 2878 774 aa, chain - ## HITS:1 COG:BH3050 KEGG:ns NR:ns ## COG: BH3050 COG0466 # Protein_GI_number: 15615612 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Bacillus halodurans # 12 772 9 770 774 768 51.0 0 MNENDANPIVQLPLVCTRGVVVFPNQEVIIDVGREKSTRAVEEAQEKYESQVVLVAQRDL ALEEPDVNDVYSYGTLCQIKHIRRMDGYLRVKFRGMQRVELHTIINDDTLMSVTAEVKTD IAQDPMEEVALVRKIAKQFEEIEAVSQTIPKEMINELAKGVSAPVLSDQIAQLFPFTLEK RQELLETLGVNERLYLILQEIESEKELSQIENKINDKVKTRIEESQKEYYLREKMRAIKE ELGDVPDTDKDVDAIRKRLEENPYPDSIKDKIRDELSRYEMLPAASGETGVIKTYIDWMM DLPWWQESRDNEDLNLASEILDADHYGLEKIKERILEYLAVKQMTNSLRAPIICLVGPPG VGKTSLAKSVARALDRKFVKISLGGVKDESEIRGHRRTYLGSMPGRFIQAMKKAGTVNPV FLIDEIDKMASDYKGDPASAMLEVLDPEQNSLFSDHYIEEPYDLSKVLFIATANYLENIP NALRDRLEIIELSSYTELEKIEIAKRHLVPKQIKENGLKTSQLKIDDEMISFLIRYYTRE SGVRQLERVIATVCRKSVLAILKDNKRSIKVTKKLVKEWLGHEKFEYGKRETKDQIGTVT GLAYTSFGGDVLQVEVNHFEGKGKLVITGQLGDVMKESATIAYDYVRANAKKYKIQPEVF EKNDIHIHVPEGAVPKDGPSAGVTLTTALVSSLSDTPVKANLAMTGEVTLRGNVLPIGGL KEKSMAAHRCGITTIVIPKANVKDLDDVPATVKESVNFVPVERVSQVLDVALVK >gi|312957472|gb|AENW01000004.1| GENE 70 65703 - 66980 1627 425 aa, chain - ## HITS:1 COG:BS_tig KEGG:ns NR:ns ## COG: BS_tig COG0544 # Protein_GI_number: 16079875 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus subtilis # 1 421 1 422 424 318 47.0 2e-86 MSSTWELKEKSTGELTATVEGDTWKDAQKKAFRKLVKKVNLPGFRPGQAPEKLVRKQISS QNILMEAIDEVAGDALSAGIKEHDLWVISRPALDIESIDEDKVTFKFNVTVKPEVKLGAY KGLDITKEAVEVSDADVEEEITRLQERFADLVVKEEGKVENGDTAVIDFEGFKEGVAFEG GKGEAYPLVIGSGSFIPGFEEQVLGMGIEETKDINVTFPEDYQAEELAGQPVVFKVTVHE IKSKVLPEADDELVKQAEIENVETLEAFKEYSRKNLEESKKNQAEQKFENEILTAVTENA EVEIPQVMIEEETDSLVRDFEQRLQSQGFGLEQFKQVTGQTDEMIREEMGKDAFNKVKVR LVLEAIAAEEKIEISEEDVNNELENIANMYQMPVEQVKQLISNDAVSYDLRIRKALELVK EATGK >gi|312957472|gb|AENW01000004.1| GENE 71 67021 - 67743 889 240 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401434|ref|ZP_06645577.1| ## NR: gi|293401434|ref|ZP_06645577.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 240 1 241 241 296 66.0 7e-79 MDTYYEDILKKVETLMKDAQFAEAYAILDEELSMPYIPREYEEPLIAYYNQCRSECKWKD TAVREEDIETLLKGSLEEAFLAIEQLKKSNIRNHMDAVADYLSQNPHYLVRSLMIEAMME QNITDEVSVDIDGLEVTFSPCSLDAPMESEGALEAVNYLKDWFENDNPTFTMMCVETLVK EAYLRLPFNIEEDEALPLAAAVTAYVFHAYEEHEAWMLFEEEKGLAQYRGYELLLRKHEM >gi|312957472|gb|AENW01000004.1| GENE 72 68172 - 69755 1126 527 aa, chain - ## HITS:1 COG:CAC0631_1 KEGG:ns NR:ns ## COG: CAC0631_1 COG2199 # Protein_GI_number: 15893919 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Clostridium acetobutylicum # 341 518 330 513 525 112 33.0 1e-24 MYHEHVAVTVLSTTSDIQACLEQGIARDLMHCHIQTSGAHGAWHSSDIILCELSLSSLQP IRSRMREDAYLLYICDADAASCADCWDVADEVICRPLSMAYLEKRIRCLYECYRQKERAW LLDTYLNTLIDSMPDLVWFKDEEGSHVKVNSAFCHTVGKSRMEIEGKNHCAVWDVDVDDC AETEDIVRREKKTCQFNELVKSPHGLRQFRTYKSPLFDKQNRIIGSVGIGHDITDLENMS TELEILLNSMPFAILIRDQAGTVLNVNDKFTEFFAVSRASILDVAYDDWFSSLLREGKQL KKESNGKAILTFEGNRRILEISNETIYDIFKSRVGDLCIYRDMTEEYLLEQQLSSNSNTD YLTGLYNRRYFYEYYADLRKFKQISILYVDLDYFKTVNDTYGHQVGDEALRISAEVLKKM FPKDLIARLGGDEFLVSMTASMSAQELLRQGNRLIHELQKHFERNAYYMNLSASVGISYT TDPVMRIDDLVRESDTALYKAKQQGRSKCQLYERAASNTRYLKKAIR >gi|312957472|gb|AENW01000004.1| GENE 73 70252 - 71844 1247 530 aa, chain - ## HITS:1 COG:PA3702 KEGG:ns NR:ns ## COG: PA3702 COG3706 # Protein_GI_number: 15598897 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Pseudomonas aeruginosa # 339 518 148 333 347 100 34.0 7e-21 MDKNYESWSLEDIQAEIMHVRLIDLKREYELCMILSEKAKLSNDIYALAFAYTFISDFYL ASKKNKDCIRYLERARKLCESTEYTELLARIYNFYGMYYNSNYEEIKALEAYLKSLDAAE KCQNLTLMSSAYNNIATCFELKRNYTEAIHYYKKCYELLQSMEKNSAYSKAIVLSNLCNC EYRLKDAAALHAYFSRFEDLDRQSFEESMNLLYLFCKLMYLRLHEAVSVQAVMEELLIEQ EKVENRLLVYQILKNICSIMLEINNQPYSERLLKILQAIEDEDDIKSRRELQKLIVSYYE KFGTKEELLQAYREFYTIILTIEDTDMEDNSSGLTAALELYRTKERQVSLEKENEQLERL MNIDDLTNIYNRRCFNEDITATDLQKEKIVAVAMLDIDYFKEYNDIYGHQMGDQALVKIG RCMKQYEKKGEIQFYRYGGDEFSAIFIGQSEESVRKTMAALTHDIREQKIPHKGSRTAQI LTLSFGYAFSSQEPVDMTVLIRQADEQLYQHKKLRRQRCKHADAVTGNVQ >gi|312957472|gb|AENW01000004.1| GENE 74 72257 - 73948 195 563 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 317 551 1 233 312 79 26 9e-14 MNSIKSAVYKKNRLNFILALLGSIGNAGVAVGVAFLLREFVDISISGSMDALYRMLKMFV LLLLAMVLVDVISFIFTNRFICRGMRQYKHIIFKGLLQRSISSFQKEAVAQCMSALSNDA TVIEKNNLEAIFEICTYGMMLAAGLGSMLYLDSYLTICVILASMVPLLVSVFFSGALQRA ECCTSKHHADFIALLKDLFSGFTVIKSFQAEAVVLDAFEQENAALEKSKKRRRDLISILM LLSQISGFLVNLVVFGLGAWLCIQGRITAGTVIAFVQLLNYITLPIEKLPALYSTRKASA ALMEKGEAALHVKEESLPEKTVTKFRQAVALEHVSFSYEEGKKVLSDINIRFEKGKRYAV VGASGSGKSTLLQLLLGYDRGYEGKIFLDEVELNALSRESLYRLVSMVEQNVFVFNATLL DNITMFQSFPPAVCEHALKRSGLDAFVREKGAEYLCGENGCLLSGGEKQRISIARGFIRN AQILMMDEATAALDTATARYVEESILHLDDVTAIVVTHKLHADILKQYDEILVMKDGRIE EAGTFEELYARKGCFYSLYRLSV >gi|312957472|gb|AENW01000004.1| GENE 75 73941 - 74714 822 257 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHQRRAERECGGTPDAMLLPRLADYFNVSIDYLFGRGKQEPERLSDLVFQKLKGLKRSKQ LELAFEICYMMENAIGKIPHHEALPDQENFMMQEGAEPLLYQVLHDDVYSCMRLNEEFHY FLYVPQPSCGFLHALPAQEEFEELLAFLDKPHCFAMLYQLSKCPQGRGFQVKGLAKKLSI EEADAAQILQDLKKRQIVHEIQLEKEKGLEPIYVLSEKPGFLPMLLFMAAYIQSGILYGY FAMDRELPILNGEVSHE >gi|312957472|gb|AENW01000004.1| GENE 76 75288 - 75824 417 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228583171|ref|YP_002853872.1| 30S ribosomal protein S30AE family [Clostridium sp. 7_2_43FAA] # 1 178 1 176 178 165 43 2e-39 MKVQIYGKNITVTPAIAEKIEKKLNHLEKYFIIDENVVANVVVRVYPNKQKIEVTIPTKF AVLRAEVVQDDLYAAIDLAIDKLEDQIRRQKTRLTRKNKEKLAYAFIEEEEIEEEFDDTD NELVRTKSLVPDTMELDEAIMRMEMLNHSFFIYRDDETKEIAVVYKRHDGGYGLIETE >gi|312957472|gb|AENW01000004.1| GENE 77 76027 - 76446 437 139 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3059 NR:ns ## KEGG: Cphy_3059 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 30 139 37 148 152 108 50.0 8e-23 MDELIRILKAEELTCVVLQKQRLYKEHANGILPILHLLDQGHLQGAQLVDKVIGKAAALL MVRGDVHQVHACVISSHALEIFQLYNIPVTYDEQVPYIINRTKTGMCPMEACVMDVNDPA AAQRLLNAKVKSMKAEQHA >gi|312957472|gb|AENW01000004.1| GENE 78 76825 - 80892 3323 1355 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_4303 NR:ns ## KEGG: Dhaf_4303 # Name: not_defined # Def: LPXTG-motif cell wall anchor domain protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 2 1151 277 1390 2122 517 32.0 1e-144 MLTDTDPVSVSVNFKVPVLGDGLTEEDSYVRKGDTAVIELATKYKLADTASPSFALTRKV EENGGSREVKIGSLRIVTDTDANKVYAHIVFDGDDEVFDGQPIAGGGAWSNVNCKFSTTL EYNGIGDGAKPGEHAVTILGKSFSVKVPEPPVIMTMEKSGAVEGKFVSWKVKIDAQQAGA AADFGGYVFQDNLKSVGSYVDRSFKIGTAEDGSDAVEKEVSYEASLLQHTFPESAKGICY VFFKTEIPDAIYYANSEKTIRNIAVILKDKEQVSTSSASVNYDGTWIKKELNGINHKDGT ISWTITANQPAASLANAVITDKLDSKLNWQSAALEIYNGTSWDAGSASFSNEPADGKYEI GTINAKVRLTITAQLKDKSEIEHTVVSVNNKATLSWEGNTGVGSNSVYSSIGFNPITKTK GAYDASAHTATWNVNVEQSDVNDDLRVLELLVYDASFTWDDAYEITDNTGTDLTTVSKEV VKSLTPSCNQRYVKDSFATEADSAAVPTLHHIKKNGTVIADVLVVTGTDVNGLAVDKHNQ SFSYKSQITNPNIYLSNDNQSGNSVKNTAFLYSGNKLVNQANATVSCPNTILLKDALTAV DGAKDLTNADNVNKQASAADKLYNYKDGSAVFRLQVNASDLKDMTNDVTTVDGEQLGDVT VKDILPKGWEFQNITADKKFLIYEGVSANGKATAKTLVEPDYITSDFTKAGEAAFTFSSL QKPYVILLKAGPNEQTAKGYFDKNQKISLENAASLTAEHMSAEKHVKQSIQIKSTTISKT KQRPDNGILQWKITYNPYMQKYGNALIQDTLSEGIELRMKSDGALDMDEQNIAIQELDME ADGTLKAAKPLKDTAKYIRYNPVNRTLYFTIPDEQKVYQLIYLTDITGDYQSTLSNHAIL ASGHTEESGVTVNDQVYRSDAQSTMQRSGWLEITKVNEKNIPLEGAEFTVFSKENDAVIR KGVTPVSGVLTIRGLPIGSYYMKETKAPDNYRLSPVVYQIEVIKEDVSVLTKINGSKNTL TLVNTQEGTSGDLKIRKELKGNDTDSDMEFKFRIQAGKLNKEVAYLGEGGKKDGTLVFTD GKAEFTLCGGQSIQLVNLPKDTDYTIEEQEYQELGYQIEKQNDKGTIKADVLQEAVFTNI RNKVLSPVYYQMNVHISLDGQKPQNGQFQFQLKDEMGVVLQTVKNDGGVIKLKELKFSSP GVYTYQITQVTNAVDTIRYDEGLYTVIITVIEKDGLLTVESVVWEKDGKSYESDTPLFSN TTSQVETPQQPIAPDESQEDATSDTEEKETLPEKEPVKTKEQQTGDKNKGAVKHEKKKAT AETYDSTHMTLWLMTASVSLAVLGIIKLYGMRKKS >gi|312957472|gb|AENW01000004.1| GENE 79 80912 - 81061 202 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVRGMKRLMAFFVVFTLLFQMTDMPLHAENSRDVSALLTVKEAYIETKS >gi|312957472|gb|AENW01000004.1| GENE 80 81351 - 82280 1192 309 aa, chain - ## HITS:1 COG:PAB2388 KEGG:ns NR:ns ## COG: PAB2388 COG2355 # Protein_GI_number: 14521159 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Pyrococcus abyssi # 3 309 2 306 307 139 32.0 5e-33 MKLFDLHADIGYDVMQKKHTETDILNRFHLQKFLEGEVSYIGMASFFEGSETWDYMQDMV LSLKKEIEHCEMIDLVLCGEDLTENGHIKAILTVEGMCGIKEHAREKIEWLYAQGVRIAS FCWNEENLLATGVKGNPEHGLHPLGEEALQAMIDCNMLVDVSHANERTFWDIMAHPSARV IATHSNARALCDHPRNLWDDQIIAIAKRGGIIGMNSAPAFVHERPEKRDIPHLVAHMHYI KQLAGIEALALGLDYMDFYEGCEELHTKNLEDCSKSQRLIEGMLTRNFSEEEVRLIASEN ALRKLKEVL >gi|312957472|gb|AENW01000004.1| GENE 81 82393 - 83367 854 324 aa, chain - ## HITS:1 COG:no KEGG:Ccel_2610 NR:ns ## KEGG: Ccel_2610 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 1 323 1 329 330 131 27.0 4e-29 MPNIITHKIFAEEVLKSMTKHDIRSMIERHPQIFYIGSNGPDFLFFSHIKPWESYKSHAL NRLGSAMHAHGINAFYETAIECIRAQKHEDVKELMSVYLFGHLCHWALDKTTHPYIFYRT GNCRGVSAGLHHRFESMMDTMMLEKYRGLSIRDYPCYEICAYDEDILKAIARIYVPAARK VYHHEVKVHDIRETLNSWYDVQKLLYDPANIKYPLLKGFETLARKPWAVSGNVVRPSVDE RYDVLNEEHAIWKHPCDDTITSNASFIDMFNEAIETAVRVVDKAYGCIEYGADSQSVLEL LQDAAYDTGMDGKRDMKYFDIIYD >gi|312957472|gb|AENW01000004.1| GENE 82 83466 - 85319 1196 617 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 606 1 595 636 465 42 1e-130 MNKQKKPLYFYYLLILIVIVAGNMLFSAMEQSRIKDVSYNTFIKQTEQKKIDKVEIGDQS ISYTLKKDEKTIYQTETMETDTALSQRLYDAGATFTRVHTKEMNPWLSFLITGILPIILL FWFGNHMFKKMQKKMGGDAMSFGGGGLGGFGKSDAKIYVKSQTGKTFLDVAGQEEAKAAL QEMVEFLKSPQRYTQIGAQMPKGALLVGPPGTGKTLLAKAVAGEANVPFFSISGSEFVEM FVGRGAARVRDLFKQAREKAPCIVFIDEIDTIGKKRDGAGVGGNDEREQTLNQLLAEMDG FDGSTGVILLAATNRPESLDQALLRPGRFDRRIPVDLPDLAGRQAILQVHAKDVRMGKNI DFRAIARATAGASGAELANIINEAALLAVKDNRTQVIQKDLEDSVETVIAGYERKNAVIS TKEKLIVSYHEIGHALVAAKAKNSMPVTKITIVPRTSGALGYTLQVPEEESNLITKEEAF TKIMTCCGGRAAEDLVFHSITSGASNDIEQATKIARSMITRLGMSETFGMTALETVNNKY LGGDTSLACSDQTATRVDEEVVRLIQQAYEEARRILEENKEKLHELAKFLYERETITGEQ FMEIVNRVPQLETAQNL >gi|312957472|gb|AENW01000004.1| GENE 83 85312 - 85530 127 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMKHSIIRFYKAYGVTQPTFEEDTAGRLSDLFIEQTGSSTRLFISKAQRTPDYGIADSWR LPGSCIRRCKHE >gi|312957472|gb|AENW01000004.1| GENE 84 85911 - 87083 532 390 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLRITMKHNSVLVYEDFFMTKEDGRTPEIPLYVDETQTAGYEIDIRAKHFHAAHIVLHLY PGVHSELIVYMMPKLHIQTQPMLQSLHKLHEKNKPSFSFEAFLYALRYLNPTLPAELLRQ RAEDIWMQLSRETNPAFLPPWLLLHQRVYKIAEEVFEKHMSCSVSIAACGTASSTTHEQE QWQRFLQTCVPVCATDEQEISEAALYNQLHIEAGGADSAAAKDKINSRKRALQALVNALP KEPSQLLPWDAWELLLQETNGSYEILKLFLGKSLLYAWLAQCQSSRTAASKAEWQQVLKK EAKHLYHSLKDTDILKREPPALCEQLKESDMEMLLRKVLKAYDKSQSNASFTENVCAFQR LLALPIDGTLHNRDCRLLLEISEELNIPPI >gi|312957472|gb|AENW01000004.1| GENE 85 87162 - 87863 929 233 aa, chain - ## HITS:1 COG:MA3262 KEGG:ns NR:ns ## COG: MA3262 COG1346 # Protein_GI_number: 20092078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Methanosarcina acetivorans str.C2A # 1 230 6 235 238 196 52.0 2e-50 MKELLKNPMFGILLSLAAFEAGLLLQKKTKLIFLNPLLTAIMMVIAVLMLSGIGLETYQL GGDIISLFLGPATVVLAVPLYQQVHSLKNYFVPIMVGIVCGIAVGLVSTLLCAWLVQMEP AIIASLVPKSITTPIGMELSVELGGIQAITVLAILVTGIIGAVVAEFVFRVFRIEHPIAR GIALGCSAHAIGTSKALQLGHVEGAMSSLAIGVCGILTVFLAPPVWSLVSALL >gi|312957472|gb|AENW01000004.1| GENE 86 87860 - 88213 435 117 aa, chain - ## HITS:1 COG:MA3263 KEGG:ns NR:ns ## COG: MA3263 COG1380 # Protein_GI_number: 20092079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Methanosarcina acetivorans str.C2A # 3 115 1 116 165 82 34.0 1e-16 MKIFREVLVIFGLYYVGELISTTLSLPLPGSLVGMILLFVLLQLHIVELEQIATVSDFLL GHLPFFFLPAGVALMASFSAMKGLWIWMLVICLVTTIITMGCSGRIIQHMMERKSKP >gi|312957472|gb|AENW01000004.1| GENE 87 88210 - 90093 2181 627 aa, chain - ## HITS:1 COG:MA4618 KEGG:ns NR:ns ## COG: MA4618 COG1032 # Protein_GI_number: 20093399 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Methanosarcina acetivorans str.C2A # 3 589 126 736 742 565 47.0 1e-160 MAFLPTTREEMLEQGFESVDFVYVSGDAYVDHPSFGCAIITRTLQAYGYSCAILPQPDWH NDEEFTQFGEPRLGFLVSAGNIDSMVNHYSVNKRRRDKDSYSDEGVMGKRPDRPTIVYTQ ILKRLFPHKPVLIGGIEASLRRLSHYDYWDDKVRRSILIDSQADLLMYGMGENTIIEVAD ALNSGLRAEDLCYIRGTCWKTKALEYLSDYVLLPSYEEVCADKHTYAKSFHIQHENIDAI AASVLVEPYDGWYVVQNQPPLPLTQEEMDFTYSLPYERTYHPRYTYIPAIEEVQFSIVSN RGCFGSCAFCAITHHQGRVISTRSRDSIVDEAKRITEMPNFKGYIHDVGGPTANFSREAC DKQREYGACKNRECLFPKGCANLKVDHSRYLEILRAVRALPRVKKVFIRSGIRYDYLMYD KNDEFFDELVQHHISGQLKVAPEHINAAVLDKMGKPRKELYLKFVDKFKQKNEQFNRNQF IVPYLMSSHPGSDLQAAIELACYLKKIHYTPKQVQDFYPTPGTPATCMYYTGLDPKTMRP VYVARTYEEKAMQRALMQFTYPQNYDLVYKALKTAGRMDLVGNSPKCLIPYRKGHTGNKL AGGRQKEQHRKPYANKASKPQRRGKRS >gi|312957472|gb|AENW01000004.1| GENE 88 91070 - 91990 906 306 aa, chain - ## HITS:1 COG:MA1721 KEGG:ns NR:ns ## COG: MA1721 COG0598 # Protein_GI_number: 20090573 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Methanosarcina acetivorans str.C2A # 24 303 71 353 356 89 26.0 7e-18 MLYDLYRKQKTSPQKAMEGQFLFGIYRLEEWKGLVEAFGFSPGTLVELDHMDQSRTLHKL DSYYGYCFGFVHPLKVRKEAAAGIGLYCRQREVILISENTDQLLDFFRLLQQLPAAQLSA EHILSLFFEFLLKKHKEEHDQLEDLIEELDNDVLNDNLQNFNQRITGIRNRIRYLLQYDE QFSDVCEELLEDENDLFAREQLHHLRICSDRVERLGQHTRTLRDYSVQVRESYQAQVDIR LNRMMYIFTIVTVIFLPLTLIVGWYGMNFTGMPELHWRYGYPFVIILSLVSIGICVWSIY RKRIRK >gi|312957472|gb|AENW01000004.1| GENE 89 92316 - 93167 756 283 aa, chain - ## HITS:1 COG:BS_yxxF KEGG:ns NR:ns ## COG: BS_yxxF COG0697 # Protein_GI_number: 16080975 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 12 279 22 290 311 112 28.0 1e-24 MTKRHMGAYLCALLLFGTLGLFVRQAHVAGDVLAFLRTLIGAAFLGVLLLLQRHHIQKIG GRQLLYVLLSAAFLGFNWVFLFEAYVAATISIATVIYYTAPLLALLAAVFLFHESVTLRI VLGIVLTMGGLLCITQVTGTAVQLKGILFAAAAALCYAGVLLTNRFLHDIDGLYFTFLQL LCSAGILFVYLLLEGRIQLIPELPAASWPWIMCIAVVHTGVAYALYFTSLHHLTSSQAAV GSYLDPCIALLLSIFLLREPSTLMQGIGIAAIVGGIIISDSPA >gi|312957472|gb|AENW01000004.1| GENE 90 93160 - 94623 1683 487 aa, chain - ## HITS:1 COG:no KEGG:Glov_0012 NR:ns ## KEGG: Glov_0012 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 12 473 19 480 493 161 29.0 6e-38 MLHLTDIKKYERCPRAFWLSRRQKKEFVPFVNYNESMSELVKQLLMIREEDAFVGQANDS GELALQALHEKKVLIHARFVYEDLRINVPFLVQEDGRRILYFTYRSCFPKEHEAVRMAQY LAVLEKLGVSIDAVYAIHLNAAYVRGKELDVRQLLIVDEYLYNGKNKAHKTIRELLDKQE IDLDAMLEKLHACEAMDDIPVKRSHVCTRGGKCMYYDDCFPEVPADDSILNLVQAAQKYE MHEEGITTLRDADIDRIEGTRHQYAQIMAARNHGLYVDKGALRCWKKAHIQTPVSYLDFE WETYAFPPYEGMKPFDVLVFQYSLHIEEQQKLRHVGFIGEGDCRRAFLEHLLAHIPKTGT ILVYNMDGAEKLRLVQLAQQFPEYEERLRAVWERMVDLSLPFSTGNVYDIRMAGFYSLKR LVPVFSDYSYQDLEISYGMDAVEKWREYCTADAEKKQEIYGQLEQYCAMDTYAEYIVYHA LEDMMRD >gi|312957472|gb|AENW01000004.1| GENE 91 94673 - 95614 961 313 aa, chain - ## HITS:1 COG:DR0055 KEGG:ns NR:ns ## COG: DR0055 COG2378 # Protein_GI_number: 15805096 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Deinococcus radiodurans # 8 305 10 307 316 60 25.0 3e-09 MKRCAACIRMLQLLRSRGFMTREELAQELNTNVRNILEYRKELEEVGYVIEGTTGKYGGY QLKSGTLLPVAGLYEEELRSLQESRRYLESHRDFLPYATYCRAIDKFLATTTLQVRESGV YVEESADVTGAMISMIRICEQGRDALFAVELQYKSLHASDFETIVIQPYEIINVKGSYYC LAYSLKARAYRNFKFSEERMRNVRLTRRPFVRDADFHIRDYIGKTGLIRDEIIELKLYVY GESARLISEKKPGISPVLEWVDEQTLYLTTMMEGRISARNFLLSLGNQCQLVSPQDLKQE IHAIAKDMLALYS >gi|312957472|gb|AENW01000004.1| GENE 92 95627 - 95986 362 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915940|ref|ZP_02078148.1| ## NR: gi|160915940|ref|ZP_02078148.1| hypothetical protein EUBDOL_01964 [Eubacterium dolichum DSM 3991] # 1 111 1 111 112 140 61.0 2e-32 MMSDRKLATMMLNAVWNEDVRGLRRVLRMGAGPNWIFNGYPILIHAVFTRNEKIMMLLIK AGAVQVEEALGFALDRCVGEMIFPLAFLGIVPKEEEVKEEFGPYPSRYCPLDYPLPARA >gi|312957472|gb|AENW01000004.1| GENE 93 96247 - 96885 646 212 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915939|ref|ZP_02078147.1| ## NR: gi|160915939|ref|ZP_02078147.1| hypothetical protein EUBDOL_01963 [Eubacterium dolichum DSM 3991] # 7 166 1 164 182 140 50.0 8e-32 MTGGWNMNKLVQKAACIALLAALMGGCSMNDKKDANTKTNETKEAAEKSVKDAKNKTEDS IDNVMNYFKDKGLKYENSKAITDIDFAAYEGRSFDYNGSTGYLYRVKSDDDNMKKVLKEA KDNGKVKVSINNKEQEYGAKVNGDFLFLYDTNADWNDVVTAFPNYTYAGTGTTGTNGTNG VSEPSNPGTTKNANEQNSNVNTPNDAKNGMED >gi|312957472|gb|AENW01000004.1| GENE 94 96912 - 98165 1105 417 aa, chain - ## HITS:1 COG:BS_ywjD KEGG:ns NR:ns ## COG: BS_ywjD COG4294 # Protein_GI_number: 16080773 # Func_class: L Replication, recombination and repair # Function: UV damage repair endonuclease # Organism: Bacillus subtilis # 20 302 31 319 320 147 28.0 4e-35 MKIGYACICLDAQFHFETCIQKFATEDRLRSIIRANLETLQKLLEYNAGHNIRMYRLSFD LIPFGSSPVNTIPWLDEFAAQFQSLGDYVRKNNMRVSLHPGQYCVINSPREDVVERSIDE LLYHASILEAMGLDATHKMVLHVGGIYGDKQQAMQRFARVYRRLDPIIQKHLIIENDDRY YTVEDVLYLSAQLSIPVVFDNLHHAILPPPVERTQLEWLRLVSGTWKKEDGIMKIHFCQQ DVKKRKGAHAMHIDADTFLEFIREREGLDMDIMLEVKDKNISAIKCRNLLEKTLQDAQAE WKRYRLLFLLDSTRLYEVWNTLMHSSCGIQSLDFYHVCEDIGRRVHTASDVSRMLQHVIQ NTDWTQRTANLLLRAVTAYEAREKSLEQLLDTLLRACEREQRYDLYDAVLLLKTYEV >gi|312957472|gb|AENW01000004.1| GENE 95 98359 - 99135 847 258 aa, chain + ## HITS:1 COG:BS_ykrA KEGG:ns NR:ns ## COG: BS_ykrA COG0561 # Protein_GI_number: 16078519 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus subtilis # 1 255 1 254 257 106 32.0 3e-23 MKKKYMFFDIDGTLTDNATKKIVPSAQKTLDRLQEAGHFVAIATGRAHYKARGFMEASGL HNMVCCGGNGLVINDELIMNTPLDRQKAIAVYKEARALGYGALVMLDDSIDVYDVDDRFL RQCGERKEPTNYIFHADFDIDQVKDIYKLYISVPKEEEHRLTKKDTLGNLRFVETYLMFQ HDRKKEGILDMMERLGGPVEDVVVFGDDYNDLVMFDDAWFSIAMGNACDALKKKADYVTE RNVDDGIYKACLKFGWIS >gi|312957472|gb|AENW01000004.1| GENE 96 99555 - 99992 510 145 aa, chain - ## HITS:1 COG:MA3189 KEGG:ns NR:ns ## COG: MA3189 COG1846 # Protein_GI_number: 20092006 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 42 145 31 134 137 64 31.0 7e-11 MNHTTSMQELIRLLPHWHYKVERSIRRQQKSRQISYETYFCLMTLKNCGQMKMGKLAKAM RLSKQQATHMIDSLHRYGLVERSENPGDRRSIYIGITAQGFRFLKENALDATALYEQMLQ KLSDREIAAFEQAVHTMLEVLTKLD >gi|312957472|gb|AENW01000004.1| GENE 97 100150 - 101217 938 355 aa, chain + ## HITS:1 COG:STM3467 KEGG:ns NR:ns ## COG: STM3467 COG1289 # Protein_GI_number: 16766755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 182 306 369 496 695 59 31.0 9e-09 MRKISMSFVKEALYNAFRFVINVGFIFLFQMMFHAENTLTAVALSVGFTMLPNSELHIRP GAMCCIVLLLYIGGGIAAQSALLHPALAFLINFWFLVLLLALISEPMEMKANISFLLCFV FSQSTYVPWTQFPARLACVSFGALLICGCIVLNWKRKGIGRNGCTLKEQFQRSRVHRSYI LRMSLGISLAMLIASILQLSKPLWISIVVMSLTQLEFSETLERIRHRFIGTLAGIMLFFV FFQLLIPQQYAMLVIMLLGYIGFFLPEYKYKQVINAISALNASLVILDTKTAIENRLFCL VLGIVIVIVIYMLAGTARKVQRIQRWSVHTAMADDHPKNRETAALFSISTCTYGE >gi|312957472|gb|AENW01000004.1| GENE 98 101459 - 101581 104 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSTIDIVISAGGILLAAGLLYAAYRLMKSAVDTKQCHMH >gi|312957472|gb|AENW01000004.1| GENE 99 101675 - 102250 603 191 aa, chain - ## HITS:1 COG:lin2828 KEGG:ns NR:ns ## COG: lin2828 COG2156 # Protein_GI_number: 16801888 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Listeria innocua # 1 186 1 187 190 162 47.0 2e-40 MKKGKKTWIAALLCMLSMTLICGLLYPLVMTVSASLLFPEQANGSQLTVTRNGKTQNVGS ALIGQSWTKPEYLIGRPNSGAPTNRSAVSDEQQQAVADSVAWWHAFDPQTRGKDIPEDLV TASGSGVDPEISPQAAYFQVERIARVRKISQQSVRKIIDKYTTGKTFGFLGEERVNVLKV NLELDAYTISE >gi|312957472|gb|AENW01000004.1| GENE 100 102262 - 104319 2260 685 aa, chain - ## HITS:1 COG:lin2829 KEGG:ns NR:ns ## COG: lin2829 COG2216 # Protein_GI_number: 16801889 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Listeria innocua # 6 684 3 680 681 936 74.0 0 MKQVNKQAVYRDSILQALKKLAPAVQVHNPVMFIVYIGAIFTTILFIANIAGITDEPSWY VFVIALILWFTVLFANFAEAIAEGRGRAQAESLKKSRKQVIAHKLSSIAEKEAYTDVSSS ELQVGDICYVKTGEIIPMDGEVIEGIASVDESAITGESAPVIRESGGDRSAVTGGTTVVS DWIVLRVTAASGASFLDKMIAMVEGAARKKTPNEIALQILLITLTIIFLMVCATLLPISR YVRDMVGQGSAVSLSNVVALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAA GDVDVLLLDKTGTITLGNRQAVAFQPVQGVQEQELAEAAQLSSLADETAEGRSIVVLAKK KFNIREHSMQQLHARFIEFSARTRMSGIDMDGGMEIRKGAADAIRRYVEAGGNTYPKECE EAVQSIAEQGGTPLVVAKNHRVLGVIYLKDIVKDGIQENFEALRKSGIKTIMITGDNPMT AAAIAAEAGVDDFVAEATPETKLELIREYQRKGHLVAMTGDGTNDAPALAQADVAVAMNS GTQAAKEAGNMVDLDSSPTKLIEVVRIGKQLLMTRGALTTFSIANDVAKYFAIIPVLFMG IFPNLAALNIMHLTSTTTAILSAVIYNAFIIIALIPLSLRGVKYRELPADKQLRHNLMIY GVGGIILPFIVIKLIDMALTMCGIA >gi|312957472|gb|AENW01000004.1| GENE 101 104338 - 106056 2003 572 aa, chain - ## HITS:1 COG:lin2830 KEGG:ns NR:ns ## COG: lin2830 COG2060 # Protein_GI_number: 16801890 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Listeria innocua # 5 566 4 558 561 608 59.0 1e-173 MNSALILQDVVYVVALLAIGYPLGCYIYKIYNGERVALMRIFAPLEQLLYRVMGVDEEQQ MHAKKYASSVLWFSLFGFLIVMGLHLVQAWLPLNPEQLENTSVHLAYNTAASFVSNTNWQ AYSGETTLSYLTQMAGLTVQNFVSAATGIAVLFVLCRGFVRRETKNLGNFWSDLVKITLY ILLPLSVVVCLILVSQGVVQTLDPYASYTTLEGTQGVLPLGPAASQIAIKQLGTNGGGFF GVNSAFPYENATPLSNIIEALCLLLIPAALCFTFGKAVKDTRQGKTILVVMTVIFVAALV GLSCAEIFGAPSWDSVASLGGSMEGKETRFGVGGSSLWAAATTAASNGSVNAMHDSLTPL GGMITMFLMQLGEVVFGGVGCGLYGMLAFALLTVFMAGLMVGRTPEYIGKKINAFDMKMV CIIILVPPLCLLLATAITTLFPAAQQLQADGGWLSNTGSHGFSEILYAYTSMAGNNGSAF AGFQANTVLTNVMGGTVMLLVRFLPMVAVIYLAQSLASKKYVPAGSGTLATTSPLFVGFL IVIVLIVGALTFLPVLALGPLAEFFTQLHVLG >gi|312957472|gb|AENW01000004.1| GENE 102 106814 - 107497 1015 227 aa, chain - ## HITS:1 COG:CAC3677 KEGG:ns NR:ns ## COG: CAC3677 COG0745 # Protein_GI_number: 15896909 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 227 7 232 232 255 58.0 4e-68 MHDKILLIEDDASIIRFLSLSLDKNGYKVIEARNGIEGISLFMSDNPDLILLDLGLPDID GSEVLRQIRSQSEVPILVVSARGQEREKVEALDLGADDYVTKPFHINELLARVRVALRKK TPRVVKEKVFVLDGLRVDFEKYKVYVEDREVHLTPIEFKLLVLLIEHAGKVLTHSFIIRN IWGYSSCEDSQSLRVFMANIRRKIEKDSSHPRYILTEVGVGYRFVDE >gi|312957472|gb|AENW01000004.1| GENE 103 107490 - 109037 1661 515 aa, chain - ## HITS:1 COG:CAC3678 KEGG:ns NR:ns ## COG: CAC3678 COG2205 # Protein_GI_number: 15896910 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Clostridium acetobutylicum # 21 504 404 896 900 322 36.0 2e-87 MKSAIIGTEKRGLMKNSHIWKNLCITTVILFLCTLVSFVFDDIEIRTENIMLIYLIGVLL IVVETGSFLWGITSSLLSILTFNYLFTNPTFSLQIDDFNYIITIIVFLIVSFVTGSLVNK LQQHAHKARSSARQTSALYEITRAYLTLSGVDTILQHTIRSLYTAQQTICTVYYTDGEAL KKIQEPMDTAAEPDDGMAAWCMEKDCDCGRGTSFYEEQAWTYHPMHCNNQLLGVYALYEE TSLREEQRLFVHTLISQMMMAVEREMLYAEQEQSRVEIEKEKLRNNLLRSISHDLRTPLT GIAGSSTLICENYQDLDDDTIYHLVKSISSDALWLNQLVENLLNMTRIQDGKLLLKQQEE VVDDIICEAVSRCENRKREHTLKVTLPDEVLLVEMDGRLIIQVLVNMIDNAIKHTPDATM IDIRCYKDHGWAVFEVIDQGEGIDESIREHLFESFVTTKSECSDSRRGVGLGLTICNSIV EAHHGEIFAYNRKDVQGAVFGFQLKLATERKEYHA >gi|312957472|gb|AENW01000004.1| GENE 104 109034 - 110536 1372 500 aa, chain - ## HITS:1 COG:TM1089 KEGG:ns NR:ns ## COG: TM1089 COG0168 # Protein_GI_number: 15643846 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Thermotoga maritima # 21 497 14 490 495 299 40.0 7e-81 MKERLLLKQHEVTGFGLMLGYIGVLLMLIGGIVLLPLLTLLWYPEEAYEAKYFILPGIGS ILLGYLLFYNIRGRETGRLQRNQDAVIVVTCWILAIMICALPFLLSGNYTFTQAVFETTS AWSTTGLSVVDVEHTSHLFLMHRSTILFFGGIGLVLVMLSVLSDTYGMRLYAAEGHNDRL LPNLLKSARIILTMYLCYILSGVALYCLFGMPLFDALIHSIGALSTGGFSSHAQSIGYYD NIWIEMITIVLMLLGNINFLAHLFLIRGKLRNFFQYCEIRFSFLVIALAVPVLGFLLCAG MGTALPHALRTALFQVVSALTTTGFQTVDTFVTLPSAALLLLIVLQLIGGGIGSTAGGIK QYRIYALCKGIWWNIESQLRCGNVIRSHKINRVDKKEAISPTELSQMGLYVVLYFCLFLL GSFILCCYGHPLAYSMFEFSSALGTVGLSAGIMTCDAPSLVLWTGTIGMFIGRLEIYVVL LAAARLGKDIRSCVRRRKTA >gi|312957472|gb|AENW01000004.1| GENE 105 110533 - 111204 701 223 aa, chain - ## HITS:1 COG:TM1088 KEGG:ns NR:ns ## COG: TM1088 COG0569 # Protein_GI_number: 15644627 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Thermotoga maritima # 1 216 1 215 218 116 31.0 3e-26 MKIVVAGGRSKADFLIGSLLEKKHEVTVINDEEAYCWYLSEKYNIPVVVGNPCKRYVLEE AEIDHADILIALRPGDPDNLAICQTAKKIFHVKRAVATVSNPRNVSVFKKLGVNTAISAT YTIAKIIEQASTIENLVNSLSIEQENIVLSELLLTGKCAVVNKKLKELSLPKNVIICCIL RNVDMIVPNGETVLQEHDKLLLLCPTALQERVLDMLTAQGLAS >gi|312957472|gb|AENW01000004.1| GENE 106 111201 - 111650 490 149 aa, chain - ## HITS:1 COG:Rv2691 KEGG:ns NR:ns ## COG: Rv2691 COG0569 # Protein_GI_number: 15609828 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Mycobacterium tuberculosis H37Rv # 11 125 2 116 227 72 32.0 3e-13 MFTRNQLRNQKVLVAGCGRFGACLAAALSEAGYDILVIDKQKSAFRRLSDSFQGFEIEGD AADVNVLEACDISHCNIVLVATDNDNTNCMIAQIAATIYHIEQVYIRLNDPDKEKLLEQT SIRAIYPARLSVQEFEQISHIALKGAAVL >gi|312957472|gb|AENW01000004.1| GENE 107 112055 - 113164 1373 369 aa, chain - ## HITS:1 COG:SA1531 KEGG:ns NR:ns ## COG: SA1531 COG0686 # Protein_GI_number: 15927286 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Staphylococcus aureus N315 # 1 369 1 370 372 417 58.0 1e-116 MKIGIPKEIKNNENRVSCTPAGVFALCKAGHEVYVETNAGAGSGFLDKEYEEAGAQIKAA DEVFALADLIVKVKEYLPQEYHYLREDQLVFTYLHIANDEAFANALLESKTTAIAYETVR DRKGGLPLLTPMSEVAGRMAVQVGATMLQKNNGGRGLLLGGVPGVFPAEVVVIGGGTVGL NAAKIACGLGAIVTIFDISADRMGYIDDISGGTIHTAYNNEYNLRRALRTADLVIGAVLV PGAKAPKIVTEDMVKTMKPGSAIVDVAIDQGGCIETSDHITTHDDPYFERYGVMHYSVAN MPGAVPRTSTMALSNATLPYILKLAEKGVDALKEDAGFLAGLNTCKGHITCQGVSDALQL PYADPMELL >gi|312957472|gb|AENW01000004.1| GENE 108 113559 - 113780 287 73 aa, chain - ## HITS:1 COG:no KEGG:Sez_1494 NR:ns ## KEGG: Sez_1494 # Name: not_defined # Def: phosphorylase Pnp/UDP family # Organism: S.equi # Pathway: not_defined # 2 70 185 253 257 84 59.0 9e-16 MKAAGYTCVDMECSALAALAQFRRKRIAQFFYSADNLDQKQWDKRSLGNAENIEVKKNIV DIAMQLSLQLASE >gi|312957472|gb|AENW01000004.1| GENE 109 113913 - 114326 488 137 aa, chain - ## HITS:1 COG:no KEGG:SMU.2126c NR:ns ## KEGG: SMU.2126c # Name: not_defined # Def: putative purine-nucleoside phosphorylase # Organism: S.mutans # Pathway: not_defined # 1 136 2 137 253 114 36.0 1e-24 MYTRFEDTQEAVINPWDIVKRRADCPKVAVTCFAHNLIAYAIEKYQAQVYDYLHTTNGDK PIYVCKIESHRIALFMSGTGASAAVNEYEELFALGIESIVVFGTCGVLDSSIKDCAILLP TLAYRDEGTSFHYAQAS >gi|312957472|gb|AENW01000004.1| GENE 110 114392 - 114754 302 120 aa, chain - ## HITS:1 COG:CAC1011 KEGG:ns NR:ns ## COG: CAC1011 COG3339 # Protein_GI_number: 15894298 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 10 111 21 123 138 80 42.0 5e-16 MILKKRARQLKQDLPIIYLVWKDRDTPVLAKALAAMTAVYALSPIDLIPDFIPVLGLLDD VILLPALIVLTCKLIPDEIWERNRWLCEEIQEKKQRKWYYAVPIVVIWLLMICLIVKAVL >gi|312957472|gb|AENW01000004.1| GENE 111 115392 - 117299 2160 635 aa, chain - ## HITS:1 COG:pli0050 KEGG:ns NR:ns ## COG: pli0050 COG2205 # Protein_GI_number: 18450332 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Listeria innocua # 2 623 15 639 888 553 46.0 1e-157 MKQGKLKIFFGYCAGVGKTYAMLEAAHERRREGMDVVIGYIEKHDRLDTIALMQGLECIA LKAIMYHGITLEEFDLDQALQRHPQLILVDELAHTNVQGARHPKRYSDIQELLHAGIDVY TTVNVQHLESLQDVVAGITRVQVQERIPDAVFDEADQVELVDIEPDELLERLKRGKIYHK TAAQKAMHNFFVRDNLIALREIALRRCADRVNKRVSLKDRKSTREHILLCLSPSRSNALV IRTAARMASAFFAEFTALYVENVNEEPLCREDLEQLEQNRRLAQHFHANIVSVAGENIAQ QISEYAKISGVSKIVIGRSSPRPHSRARTLIDQLTLLAPDLEIYIIPDANVEPVKRKRHR LTHAHVFRHRDFMFTVLLFLGATGINLLMYHFQLPEANIIMVYLLAIVLISYNTSSRVYG LGVSLLIVAVFNFFFTAPRFSMEAYDPAYAMTFAVLFIVSFIISTLTRTMRMQLKVNAMQ AHRMELLLETSQQLQLAENMAQLGEEAVRQLYKLLNRTIIIYSVRNKTLQEPIIYHEHLN EEEEQKYLTENERAVAQWVLKNNRKAGVSTSTLPYAKALYYSIRKKDRIYAVVGIALQQK EVLSPFERSMLATMLNEIALAMDSMRKQNHRRVNR >gi|312957472|gb|AENW01000004.1| GENE 112 117493 - 118110 602 205 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRLWDAGALLNKWYFLFIILLHSAVCAIIVQNALAFFLNLGLAYLVRGFLSLHFIVNGV ESYKPTRKIGPFYILGDDHYIFYGYPFRRRISPVTGYLVNFGIAILLYLFSMSQLLLRKY ENIWLACATGVLLGTVLGFLKISMQANHAYQENMKTAKQMFMEHYGNLKELSKIEKYRQL NPSTYYETKWMKEMLHTDREEGREG >gi|312957472|gb|AENW01000004.1| GENE 113 118740 - 119570 234 276 aa, chain - ## HITS:1 COG:no KEGG:BPUM_1130 NR:ns ## KEGG: BPUM_1130 # Name: not_defined # Def: acetylxylan esterase # Organism: B.pumilus # Pathway: not_defined # 1 275 1 275 276 370 64.0 1e-101 MKSVLLIGQSNMAGRGFLNEATPIYNENIFMLRNGRWQMMAEPIHFDRSVAGVGPAASFA QAWCNANKNEQIGLIPCAEGGSSIDEWDKEGALFRHAVSEAKFAMENSELIAILWHQGES DSHSGKYKNYYQKLNVLVNSFRKELEALEVPFIAGGLGDYLGKSGFGRSCVEYDLINQEL LKYAEYNRNCYFVTGEKLYPNPDGIHINAESQRILGIRYFKAYQTKSNVVEPLDNEANMV KELCEREYTIAEKRYITLEQFTLGKSSMEEVLKFLK >gi|312957472|gb|AENW01000004.1| GENE 114 119946 - 120752 921 268 aa, chain + ## HITS:1 COG:VC1364 KEGG:ns NR:ns ## COG: VC1364 COG0561 # Protein_GI_number: 15641376 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Vibrio cholerae # 3 267 2 268 273 117 30.0 2e-26 MKYKLIVSDLDGTLLNGQKFVSNINKEAIRKAKEQGMSFAIASGRPLYPILSLIKQWEME ELVDYVLGMNGGCIYDKAKDAQKNFYTIDGELLKHIMDQYRDMPVRFWIFEKEKRYVNKG TEATRAKAALYHEDEQITDLYALCNQPRQKLIVECQPEDMDMVEQRARKLNLSTCAAFRS DPTLFEFVDKRVNKTSGLRHLCADIGITMDEVLAFGDTSNDNEMLKEVGHGVWMSNGTMD TFAHADAQTISNEEDGVAWYLEKHILAR >gi|312957472|gb|AENW01000004.1| GENE 115 121075 - 121563 455 162 aa, chain - ## HITS:1 COG:MA0108 KEGG:ns NR:ns ## COG: MA0108 COG0346 # Protein_GI_number: 20089007 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Methanosarcina acetivorans str.C2A # 1 154 10 163 163 110 35.0 1e-24 MKYMGSLYAVDDKERTIAFYKEVCGLRVIQDFGTNFTMTGGISFQTRESWSGFLEKQPSD IHYGGNDAEIYLECEDLDAFVKLLNSRTDTILLHPVKEHDWGQRGIRFYDPDMHIIEVSE PLPVVVSRFTQQGMSPSQISEKMGLSERMVNRMLKRHEKFIV >gi|312957472|gb|AENW01000004.1| GENE 116 121713 - 122465 764 250 aa, chain - ## HITS:1 COG:TP0168 KEGG:ns NR:ns ## COG: TP0168 COG0588 # Protein_GI_number: 15639161 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Treponema pallidum # 1 245 1 249 251 314 60.0 1e-85 MKLVLIRHGESEWNKLNLFTGWTDVDLSEKGHEEAKAAGRLLKQEGLDFDICYTSYLKRA VHTLDHILDEMDRTWLPVVKSWKLNERHYGALQGLNKAETAEKYGEEQVREWRRSYDILP PALNQNDARSAVAQSMYRDVNPNELPSSESLETTVARVVPYFNKVIKKDMMAGKRVIIAA HGNSLRALVKYFDKLSEEDIVNVNIPTGVPLVYEFDAQGNPLHHRYLGDPRLLKQKMEAV ANQGKKAIGV >gi|312957472|gb|AENW01000004.1| GENE 117 122807 - 123649 772 280 aa, chain - ## HITS:1 COG:Cgl2568 KEGG:ns NR:ns ## COG: Cgl2568 COG0561 # Protein_GI_number: 19553818 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 7 280 3 269 271 264 48.0 1e-70 MHKLEKKVILIDVDGTLVDYENHLPPSAVKAIRMARAQGHLVYICTGRSRSEVYDEIWNI RLDGMIGANGGYIEHHGEVLFHAHLKKEQCSAIVDWLHSRNLEFYLESNTGLYASEHFEE AGEPVMQKYMQRKGNGQENIHIRAQYPDMVFGENLYREDVNKISFILNSYADVTAAAQFF PDLKISTWGGKGETALFGDIGIQDIDKATAISLLLKYLHMEQKDTIAFGDAAVDIPMLEY CALGIAMASGGKEIKAMADDITAAVNEDGLYKAFLKYNLL >gi|312957472|gb|AENW01000004.1| GENE 118 124003 - 124503 458 166 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_0958 NR:ns ## KEGG: CDR20291_0958 # Name: not_defined # Def: AraC-family transcriptional regulator # Organism: C.difficile_R20291 # Pathway: not_defined # 5 165 130 286 288 82 29.0 4e-15 MSEPFHIVERESFRVAGYCIHTTNKRKEGQKAIPRQWVELQTQGQQKELMSHMNQEPFGL FGISVYNTAADDSRKFDHWIAVSSDHAVTGELEEYIVPAATWAVFPCTLDTIGKTEVQAI MKWLPKSDYKPLNSGYITGRMKAKAPDITYYGENDLVEVWVAVEKR >gi|312957472|gb|AENW01000004.1| GENE 119 124591 - 125439 732 282 aa, chain - ## HITS:1 COG:BH0594_1 KEGG:ns NR:ns ## COG: BH0594_1 COG2207 # Protein_GI_number: 15613157 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 1 127 1 127 127 158 53.0 1e-38 MEWMERLNEAIAYMEEHMQEEISFEEVAKIACTSSYNFQRMFSYMTGISLSEYIRRRRMS LAAEELQQGTDKIIDIALRYQYASPTAFNRAFRSVHGIAPSQVRNAQAAVKLYPPLHFQL SIAGSRELNYRIVKKDAFRVVGVCHELEKELEKNYEVVPNLWRTAAEDGTIADLSAHIDA KEPSGLLGISMCQDLKDWKFWIGVVSEEPLNGYEELQLPKASWIVFQCEGTHASIQELER RIWTEWFPSTGYQYVNGPVMEVYLDPDPSSSRLEMWLMITDM >gi|312957472|gb|AENW01000004.1| GENE 120 125490 - 126137 302 215 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241889384|ref|ZP_04776685.1| 30S ribosomal protein S8 [Gemella haemolysans ATCC 10379] # 10 211 12 215 216 120 34 3e-26 MKNKRVQKLSEQKLLQYGCSKEGMTYRCIRKLKAPDFYAVITYEGQELHAEVYDAQLREP YTPFHVPGANGSFVSSIREEVEELLEDMVQQCIDGNPYRTRILDYVAERYQSYPQFPWKS APEHGTLKTAKGKWYGVIMHIPYRSLGIDVDGMTDVCNLKNRPEFIQELIDYKCFYPAYH MNKTYWFTILLDQKLSWKQLQKLIDESYRLVSAGK >gi|312957472|gb|AENW01000004.1| GENE 121 126722 - 128062 1399 446 aa, chain - ## HITS:1 COG:BS_yocR KEGG:ns NR:ns ## COG: BS_yocR COG0733 # Protein_GI_number: 16078994 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Bacillus subtilis # 3 430 2 418 445 259 42.0 8e-69 MHKNRGEWSNHLGFILAAAGSAVGLGNIWKFPGKLGANGGGLFLLIYIVVVAVIGLSIML AELAIGRATQKNAVGAFRKLNKKWMFAGVIGMITLFVILSYYSIVGGWIMKYIAVYFGGA HFSGAATQYQDFFTGFITDPIEPILWGLLFLGLCIFIILKGVAEGIEKISKVLMPALFLL LIATAIRSVTLPGAMEGVRFMLHIDFSAFHTDMLVAAVGQAFFSLSVGMGILITYGSYVG KKENLMKSAVWICVLDTLVAILAAFAIIPAVFVTMGAEGLGMGGGFAFMALPNVFASIPG GIIFGAVFFILLFLAALTSAISILESIIACMSEEFHITRRKAVVWLFLPLMILAAGYSLS QLESRGLNLPWFDMRNGLQLLPMNAVMEKFTDNLMIPLGALCFCVFTGWVWGVQKATDEF ENEGTLRFRWKSSGPLLSAIWHRQRF >gi|312957472|gb|AENW01000004.1| GENE 122 128261 - 128722 429 153 aa, chain + ## HITS:1 COG:PAB0765 KEGG:ns NR:ns ## COG: PAB0765 COG1881 # Protein_GI_number: 14521358 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Pyrococcus abyssi # 8 152 37 183 186 106 42.0 1e-23 MQILTISSPSFPDGALIPVIHTGYGADQSPELVLHGLCEEAVSLAVILNDMDHPIPAYNH WVIWNLPVMSIIPGNIPRGAQVPSLSGAIQGIGYGRHAYRGPKPPFHWSHTYQFTVYVLD TVLTLPPTARKKHLLAAMEQHILQQAVLRGHYR >gi|312957472|gb|AENW01000004.1| GENE 123 128965 - 129456 526 163 aa, chain - ## HITS:1 COG:no KEGG:Exig_1132 NR:ns ## KEGG: Exig_1132 # Name: not_defined # Def: isochorismatase hydrolase # Organism: E.sibiricum # Pathway: not_defined # 3 160 4 161 165 212 69.0 4e-54 MNKALIVIDIQNDITKNYKEIIDNINSAIDWAVAHEIPVVYIRHENLSQGTRTFKPNTRG SELACDLKIVSDCIFTKYKGNALTSEAFSDFVRKHGITDFYLTGADACACVKSTCYNLLK DHYKVTVLSDCITSYDKRKLDEMLQYYEKKGSTIATLQELQKE >gi|312957472|gb|AENW01000004.1| GENE 124 129679 - 130581 781 300 aa, chain - ## HITS:1 COG:FN1249 KEGG:ns NR:ns ## COG: FN1249 COG2378 # Protein_GI_number: 19704584 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 298 16 312 314 245 42.0 7e-65 MKENRYFQMIYLLLDKGQMTAPELADYFEVSIRTIYRDIDILSSAGIPIYATQGKGGGIA IQDSYVLKKSLLSEQEQKQILMALQGIRVLEDEQINMLLSKLSGVFQRQQGNWLEIDFST WTKSGAGKHNFQLLQSAIWKSRIVSFSYYSGKGEQTKRIIEPHKLVFKTSDWYLYGYCTL RKDFRFFKLTRIRDLKLQDAEFMRETPEHIFERSDEFEMKTVQVTLLFDAGMSHEVYEKF DEEVSEQEDGSLLVTTILPDNELLYSYVLSCRERVEVLSPPYVRDNVRKRVRKMLEIYKT >gi|312957472|gb|AENW01000004.1| GENE 125 130708 - 131214 445 168 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_6208 NR:ns ## KEGG: GYMC10_6208 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 2 146 5 159 178 66 28.0 4e-10 MKTISIVLTNYPSHLSSFMETVYGYEYTHASICLDAMNEKMYSFNYKGFCMETVSKYKRH GVEKSISFQLQVTDAAFERLQNKIEQFVENREDFCYSSIGVVFCFVHIPFKRKKHYFCSQ FVAEILAESGALKLKRRPSLYLPNHFYRELKEAAELQEIQYDILPEAV >gi|312957472|gb|AENW01000004.1| GENE 126 131804 - 132256 469 150 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRKEEESYGGQRSIDLQMIRDYEQTGCRLKEFLENCKKKDVKLEFRNKTVEPDWMMEVY QMIMERTREELKAEQRAGIKRALKRREEGKGTYGRPRVELPSDFEKQLKERIRNQENLST YCEQLKMKKSTFYKWVKVYRDSWEEEKKLL >gi|312957472|gb|AENW01000004.1| GENE 127 132282 - 133160 899 292 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVKKIVIVGIVLLMLVGIFGCSSKDKEESRKEPIVVEKETKETDGLKQLDLDQTFKKIDD KESFIFMVTKSTCSYCNSFKKTLVPFLKEYMDILFYELEVDMLGEMKSDVEKNFAKLQKK IPEFGGGTPEMFCYEKGKLKKTASGEISEAALYNFMIDCGYIKGEKKEKKAEDYSFQTSK RIKNQNLIEVAKKIDNKDTFYLMITQSDRYNQAFIKKLIPVLEDKKIDVAALHFPLEQKG TDDEMNKAYETLMNCVKDLSVSPAVFKITKGKAEKLLEDNVSVGDIEKAFQK >gi|312957472|gb|AENW01000004.1| GENE 128 133177 - 133386 142 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEARRKENVNVLLLSAAFFLQIYIVWTDMNAISSMILKTLKNACILALVLKFVRWIISGE MHSFLNEDS >gi|312957472|gb|AENW01000004.1| GENE 129 133390 - 133692 153 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MERRIRHGKRMSSYEEAVMDLMIRVEESERYLQRYRNSNHAVIVEENGEEEHNPSFAIGK KEKEEAVQSIESIQQEEEEDTEDIERYERTEVITVKLTMW >gi|312957472|gb|AENW01000004.1| GENE 130 133828 - 134163 281 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKKEKSRGKRKLTGIILSVLFTLIVPIGFVFLMGLLSESFPVLYFYTKQIFLAFVALVI VGICMIIYQIVRYVKGDKTDPKEEERKARRERRQQRRANAEGTMKHGVVSE >gi|312957472|gb|AENW01000004.1| GENE 131 134446 - 134955 -121 169 aa, chain + ## HITS:1 COG:no KEGG:Mbur_0365 NR:ns ## KEGG: Mbur_0365 # Name: not_defined # Def: putative transposase # Organism: M.burtonii # Pathway: not_defined # 2 137 43 177 388 87 33.0 1e-16 MINLIILCFLHNLGHSLYECPNCENFTFVWHTFKSIFCTSCGMKYQKIRSAAVMDKVFDC PHRHGVFTVSDPLREYFLKDRFLLNELFGAVNDTLSFVIRKAGTKKDELIPCAVLTLHTF GRGLNWIPHIHVLLAKGGVRKDGFLNAGSTSITNLFAAPFKDHFSIVYQ >gi|312957472|gb|AENW01000004.1| GENE 132 135180 - 136451 516 423 aa, chain - ## HITS:1 COG:SMb21045 KEGG:ns NR:ns ## COG: SMb21045 COG3344 # Protein_GI_number: 16264372 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Sinorhizobium meliloti # 35 397 21 384 419 171 31.0 2e-42 MITGLERIAQNKLKYPESKHLNLIHYVNVENLKGAYKRINGKKATGTDKVSKDEYGKDLE ANLNQLVARMKTFSYRPQPTKRVYIPKAGSNKLRPLGIPSFEDKLVQNIMADVLSEIYEP IFYDFSYGFRKDRDCHKAIEHLSEMIHRNKVNYIVDADIKGFFDNVDHKILMEFLRKEIG DDVFLRYIIRFLKAGIMEHGKKIESDKNIPQGGLISPVLGNVYIYYALDMWFEIVVKKYC QGFCGIVRYADDFVCCFEYKAEAQEFFVKLQERLAKFKLEIEVNKSKIIRFGRYAGEGKG TFDFLGFTFISGTDRKGRYRTIKLTSKKKMSAKMKAANEWIRANMHMPVNELIKKLNTKL IGHYRYYGITGNYDKLEMFRWYVIERLKAWLHRRSQRAKMTWEKFDKIIEYNPSVKPKVY HSI >gi|312957472|gb|AENW01000004.1| GENE 133 137077 - 137511 133 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|223983806|ref|ZP_03633973.1| ## NR: gi|223983806|ref|ZP_03633973.1| hypothetical protein HOLDEFILI_01254 [Holdemania filiformis DSM 12042] # 1 144 53 196 196 162 55.0 4e-39 MAQSRIIDYNSDMDHVIWWYEDHETKEYVEVYDSILAFMKKLIRHIPDEHFKMVRYIGGY AAKKKKLTKMIKKMVSCKYAGLAKKNYAHRQYLMDTFRIDPLLCKCGHEMQFVEAFFPGG LEEQINETWKFYDWRSVCDPYGMY >gi|312957472|gb|AENW01000004.1| GENE 134 137453 - 137662 168 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRGNSMTGDPSVIHMVCIKCGYVIPMDVDIAYEVMRTKMYKGKRVLYGYCMKCEHIMYP ESILDKLEK >gi|312957472|gb|AENW01000004.1| GENE 135 137781 - 138134 255 117 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKYVSKTVIKALQEIDKFHVTMVQAPPGFGKTVAVRQYFKRSGEDHVWMDLRKKTIKEL DMADIITQPYVILDHVMKEHMYTGILHGFLQKNMDRHNIDRDIVLIYADEVPSFFIL >gi|312957472|gb|AENW01000004.1| GENE 136 138926 - 140752 989 608 aa, chain + ## HITS:1 COG:Q0055 KEGG:ns NR:ns ## COG: Q0055 COG3344 # Protein_GI_number: 6226521 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Saccharomyces cerevisiae # 3 605 260 845 854 272 31.0 2e-72 MRNPTDVLNSLNKQSKDLSYKFQRLYRNLYNPEFYLLAYRNIYANEGSMTPGVDGETLDG MSSPRIERIISALKDRSYCPKPARRTYIAKKNSSKKRPLGIPSGDDKLVQEVVRMILESI YEPTFSDYSHGFRPKRSCHTALEQIQRTFAGANWFVEGDIQACFDSFDHHVLIDILRKRI DDEAFISLMWKFLKAGYMEQWQYNRTYCGTPQGSGISPILANIYLHELDRYVEEYKAGFI KGNRASRKVNPEYARRNREVQKFMRQNREVWSSLSEAEKKERAGELRRLREKQREVPSKQ FRDETYKNLQYVRYADDFIISIIGSKRDAEALKADLAVFLKEKLNLTLSVEKTKITHATS RARFLGYDISISKSQEITKRQDRKVKGYSGAVKLYIPHEKWEEKLLEYGAIRIKKDKVTQ KEHWKAIHRPQLINRKDIEILSKYNSEIRGLYNYYSLACNVCAVGKFASLMHYSMLKTFA NKYRTTANKMKQKYFRNGRFTVIYKTKSGMKESVFYRGPFIRKDKPNVPQADILPAYKRY DKPNRIAAKLRSKTCELCGQYTNDVEIHQVKRLKSLSGKYEWEKVMLKNRRKTLAVCPAC HREIHGKD >gi|312957472|gb|AENW01000004.1| GENE 137 141060 - 141920 586 286 aa, chain - ## HITS:1 COG:AGc1732 KEGG:ns NR:ns ## COG: AGc1732 COG0702 # Protein_GI_number: 15888288 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 280 3 273 279 130 31.0 3e-30 MGKILVMGASGNVGRYVVQYALAAGQKVKAAGTNVKRLTQLFPNAEAVLFDVTKPSTFPA ALQDVDRVFLMRPPHLGDPKALKPLIDALQKQKRIQLVSFLSLLGVEKNPIPPHHKIEQY IEQAGLPYCHIRPGFFMQNISGVHAFEIQHFNRIVVPVRNALTSFIDAQDIGELTARVLC EAHMHQNTSYSITGAEAIDYWEVAGILSQELGRNIVYANPKPSFAKNYWISVRGLEKEYC KVMGMLYMMTRFKGAEKVTTDFEAVMHKKPKSFRQFVRDNAAAWQL >gi|312957472|gb|AENW01000004.1| GENE 138 141913 - 142341 503 142 aa, chain - ## HITS:1 COG:no KEGG:Amet_2040 NR:ns ## KEGG: Amet_2040 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: A.metalliredigens # Pathway: not_defined # 2 139 3 140 141 105 42.0 5e-22 MDTMMNAMEQVSLFCRLNMNTRRNLPIRSSEMGMLIYLVKADGEKTAKGVADFFKVTKAM ATNMSSALLKNGFLEKQQQENDKRSFLLRPTEKAVQLVNETYDEYMKQMNILRNSMGEAA FHTLLDLLNMANVILLEEKNNG >gi|312957472|gb|AENW01000004.1| GENE 139 142507 - 142824 394 105 aa, chain + ## HITS:1 COG:CAC0571 KEGG:ns NR:ns ## COG: CAC0571 COG1695 # Protein_GI_number: 15893861 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 105 1 107 107 85 43.0 2e-17 MDTQLKKGLLEICVLAVLKKEDSYGYKIVKDISPYIEISESTLYPILRRLENSKCLSIYS VEHHGRLRKYYRITNIGISRIQDFLMEWQSMLHIYEFIKGGDEFE >gi|312957472|gb|AENW01000004.1| GENE 140 142817 - 143398 382 193 aa, chain + ## HITS:1 COG:no KEGG:Elen_1069 NR:ns ## KEGG: Elen_1069 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 1 111 1 113 210 72 42.0 6e-12 MNKQEFISLLEKRLFQLPQVEKEHLLNYYNETIEDRMEDGMSEAEAVASLDSIDMIVKQV YAERELPIEEGKPAARGNRRRGWKIAAFVLLFPFWMTLLSMAFVIYLLLWTLLAVLFCIM LTFVCFLVGALWNLIPVVRANAAAAVVLLGCMFLFSGLLPLCWKLLRIGAAWLKNQTGIW LAAIRHLFVKAVN >gi|312957472|gb|AENW01000004.1| GENE 141 143399 - 144514 1183 371 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154503396|ref|ZP_02040456.1| ## NR: gi|154503396|ref|ZP_02040456.1| hypothetical protein RUMGNA_01220 [Ruminococcus gnavus ATCC 29149] # 27 365 34 393 437 84 22.0 9e-15 MKVTLKQLLKYVPVICILLGLLLIGGGFAMADFKMENLQTVEHKPYMKREKTITVHQISS IRIDSYHSEINILPAKDDNIHIQYEENDEYPMNVTKDATSLQLKRATKSFQFNFFDFDRE LNIPITIELPKAFHGKLDIDTSYGNVTVHDMAYQNITINNDHGNVSLSKLKAEAVTLDVA YGSVVLNDVNSRQAFQLNSEHGDIISKNLKADSAVLTTAYSDITLDDTEITKDMTLYHEH APVNLGKLRAQALQIESAYGDIRSTGLTIAENADFSLERSDVTLQKLSAKDMTMENAYGD TMISELDADSILMEGERGSFSATVKGSIDDFNILSEAEHGDNTLPTKYENSSRRKLQINV EYGDINVKFQK >gi|312957472|gb|AENW01000004.1| GENE 142 144695 - 144904 146 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAAFTLLLFPLSLGLASHSLIYVRLKRYGCILPSYFSPYVHKKLSVLFPRKEKKTITPVI KRHTPAIVV >gi|312957472|gb|AENW01000004.1| GENE 143 145031 - 146968 1676 645 aa, chain - ## HITS:1 COG:no KEGG:syc0402_c NR:ns ## KEGG: syc0402_c # Name: not_defined # Def: hypothetical protein # Organism: Synechococcus_PCC6301 # Pathway: not_defined # 396 602 194 372 405 68 28.0 8e-10 MKLEHGFTTREEWEEFFNQYYASIRLINQKANELLHTKDGVESWIEKYKDCSALQRSIYV SGNQQIQRHIEYFLEDGTRLQDAIADSLLSYQFRYCTRMEDTDLTYRSACMLSTYYTGRH DEISLMKCSFIKLVCFTFLDTVHFRARSLQLVTQMGECYERLYGQLSQEDQSLGLSIYDY MSSLLFEHIDSVENYNTYFNQTLLPSYQKGLQSYERFIAEADWTLEVNEIVPYLKINYTN SFIMSVLNLQKGMLSAPNLSILHDMSHQALQDAQQQKDASPFDLMKWQLTCAMCDYLRQN RDAKAMAELVETIDSKIPYRCNYSRKELDDIQFHLLLSLCNVIYALSKEGDMSMHVERIL EKVIGYIAFLPSDLFTEYRISHAVYYEIIPLLSLVREAEDVIQYFMDLFMLRQPQTLIHT YMVAACSEAILQQLLKEKPELLIGLLGLDSVEAIQQKGDDLLAYIHNAALVHDVGKVLCT SVINTQYRNISGLEFEAIQYHPLAGRHILSRIGKLAAYSEVAANHHRSVDGVFGYPQGVE APSETYHLFTCIITISDSLDAATDSYGRNYASSKTFTRVLEEMKNDQNRYHAELVHFIEE CVPLREELSYIIRCKRAEVYEHVYHLLKERQSKNEGIWQRQKQQA >gi|312957472|gb|AENW01000004.1| GENE 144 147014 - 149278 1871 754 aa, chain - ## HITS:1 COG:PA4929_2 KEGG:ns NR:ns ## COG: PA4929_2 COG2199 # Protein_GI_number: 15600122 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Pseudomonas aeruginosa # 386 556 1 175 196 123 38.0 2e-27 MVQMKQSAAGSADMGMMEDLQLAVSLHRLDDALTVLWANTAFYQMLGKKQEDFKESVVFS SCFSDFIQDYQTLYSLLCAADQHGQRQVKLRSSMRIAGADRMVEIAGTIRASEGEGQEIL LCYTPMPKLLNEREQLLSAKQEMTDNFEWMMAANTGNVYISDMDTYELLYVNKKSCDTLQ ASEAQLLGRKCYEAIQGLDAPCPFCTNAYLKKNETYNWEFYNSKLKRTFMIKNRMLDWFG HRSRIELSYDMYSEEYKLDKKDQEREAILKTIPAGMVRIDARDLDTILWHNGIFLDMIGY TQVQLEEELHFRCSKYVHLDDLPRISLVCAGLKNTGDNAVLEARAYTRSKEERIWTVTLC YISGEDSWDGIPSFYSIGLDITKERLQMEKLRHKAEKDTLTGVYNRETMKQQLQSYLIEN PKTVNALIMVDTDNFKQINDTHGHITGDLVLSEMAAGMKRNVRKDDLVGRIGGDEFTIFL KNISSATTAMDKAEELLAMFQQLFSNEKKPIAVTCSMGIAMYPRDGESFQELYECADKAL YQAKQRGKNGCCMYDDSLLQNQEYLQNSSLGAAIDSEQNYAESQDNLARYVFRILYHYEH LDEAVNLVLEIVGKQFDVSRSYIFENTRDGSHGFNTYEWCNEGISSEMKQLQNVNYKELG DYEALFQEDHIFYCRDIQSLSPTLVELFESQGIHSTLQCAFYDNGIFRGFIGFDECTGSR FWTREEVSSLTLISQILATFLKLNRMEAETPVKE >gi|312957472|gb|AENW01000004.1| GENE 145 149673 - 150098 455 141 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2149 NR:ns ## KEGG: Cphy_2149 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 6 136 2 132 142 121 50.0 7e-27 MKQQHTDNYEDIIHLPHPVSKKHAQMPIRDRAAQFAPFAALTGHKEAIQEAQRLIDQRKV LDENRNMQNDESLQEILQHITEQPRIWVTYFQPDERKDGGAYRTLIMNLKKMDEYNRRLI FSDHSWIPLDDIYEIELLLER >gi|312957472|gb|AENW01000004.1| GENE 146 150111 - 151631 1298 506 aa, chain - ## HITS:1 COG:pli0067 KEGG:ns NR:ns ## COG: pli0067 COG0389 # Protein_GI_number: 18450349 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 9 506 16 426 426 185 30.0 2e-46 MEQKKHIYMAIDLKSFYASVECISRQLDPLTTNLVVADTGKTEKTICLAVTPSLKKYGIS GRARLFEVVQTVKEINAKRRKAAPGHQFVGESYDEHELTTHPELAMTYIAAPPRMAFYLE QSTKIYDIYLKYISAEDIHVYSIDEVFLDVTGYLKAYQTTPRQLAKRIITDILNTTGITA AAGIGTNLYLCKIAMDIVAKHIPADSDGVRIAQLDEMRYRRLLWNHRPLTDFWRIGKGYA KKLEQIGLYTMGDIARCSLGTAQDAYNEDRLYQLFGVNAELLIDHAWGYEPCTMADIKAY QPENTSIGTGQVLSCPYDTEKTRLVIKEMLDLLALSLVDKGQVCDQIVLTIGYDIENLET AAPYIKAVTTDRYGRTIPKHAHGTANLKRQTASSQWMIKEVMKLFDRIINPHLTVRRINI SANHVVDEKQVQQKAEAEQLDLFVDYDALRQQEEKERAQLDKEKALQQATLQIKKKYGKN AVLKGMNLEEGANTIRRNETIGGHKA >gi|312957472|gb|AENW01000004.1| GENE 147 152075 - 152695 441 206 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225387815|ref|ZP_03757579.1| ## NR: gi|225387815|ref|ZP_03757579.1| hypothetical protein CLOSTASPAR_01585 [Clostridium asparagiforme DSM 15981] # 1 200 1 201 206 146 37.0 8e-34 MSRKAYSQQERTALKKRLHEIGLDIYLKQGIQNVKLPEILQLAGISKPFFYTFYPSLGDL IIDIIDEQRISIMKLLEKTQADETLDWRGKIEAFLYPLLHHREHRFFILSPEEEVWLYQR LTKQCFDSFQKSQIAFYEDLLAAWEVPLTAIAPQIMGNYLLSLIIVRNNAPTSLPFLFHE YLDETAALQIRLFIDHLESLRLQSIR >gi|312957472|gb|AENW01000004.1| GENE 148 152789 - 153262 575 157 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0708 NR:ns ## KEGG: Sterm_0708 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 19 154 13 151 155 73 35.0 2e-12 MGLFGKKKKAWDEGRIQENKAKMRALFEQVVEDAAGYQLVYAYSSSVKTSNYILARKTTY TYTSLIVGFREADMSIVILQTTPELEGCSDPEIFRKGEIKKAKVVQGGFTIYHKGGLMAG YTQFYISDEYDDDNLFAYMRQSEEAAQWDIFWPKFCK >gi|312957472|gb|AENW01000004.1| GENE 149 153265 - 153483 91 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTITLILIILAGMSLSLLAAHLWVGIIDGIGGCFKRIFHIGRKQKKAWHTLSKEPRQES QSIRKKPSPFEE >gi|312957472|gb|AENW01000004.1| GENE 150 153669 - 154145 200 158 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MACANKEESMRTRKCFTVTNPPIVFWLWVCILCFFIILVVLNTIFLPPPHTAMYICTTVF VFIPVTFVILWTKMYRIRVNGSRITVRKGLGLVKFSFAITDIRNVQWKVRKNTFAQNEMI TVFTAQGKRFKVESLMVNADKMQAFLTDHVEENKIKRM >gi|312957472|gb|AENW01000004.1| GENE 151 154216 - 154680 408 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293115771|ref|ZP_05792976.2| ## NR: gi|293115771|ref|ZP_05792976.2| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] # 1 151 1 148 152 77 31.0 4e-13 MKRIMKTGVLMLAVAMMLTLGACSASSSKSYTFNVETGDTIKVKLDTSNGLSLSQKDGQF TVKKDEENILQGMFIHETGYNSYLAIKGQQGMRVLEDTEKDGNTYYMYEIEGESGTEDNF VVWIRDSKTGMLIASLAGQEKAKEAFESLTITKE >gi|312957472|gb|AENW01000004.1| GENE 152 154928 - 156871 1887 647 aa, chain - ## HITS:1 COG:AGl3214_2 KEGG:ns NR:ns ## COG: AGl3214_2 COG2199 # Protein_GI_number: 15891726 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 489 636 4 160 189 76 32.0 1e-13 MKKILSNHLVGIIPLLLCIAIITIGFLSMDSNAKLQGNARIINYTGIIRGATQRLIKQEL NHEPNDALIDELDRTLHGLLSGDEEAHITRLDQMEYQELLAEMEKEWADIKKEILQYRSS GNNKNRLYALSEHYFAMADEAVDIAEVYTEEIVQQSRTFLIIVICAFLVVVMMVTIFTYQ QEKRRRRLLEAEAENRRKSEQLARQSQQMLMPINEMTELMYISDIHTYDLLFVNDAGKKL FDIKELTGLKCYKALQGFDKPCDFCPNAKLSKDETYTWEHSNPVIHGHYLLKDRLIDWEG REARMEIAFDITESLQKKKELEKRIKRDNILIDCIRELYQNHHTVDAMNHVLKLIGEVFE AERAYVFYMENDEMSNIAEWCREGITPEIDNLQHLSRHDYKWWFQLYDEQASIMIRDVKE LQGDRQAEYELLSGQKIERLILVPFERYGNFGGMIGLDNLSVEVFEDAEKFLLTFSYFIM LAIRRNEDEKTLYRLSYMDTLTKFYNHNRYIQDVEEFSEKETTVGVAFIDVNGLKEINDR FGHEAGDQLLQTGAAIMQSSVPEGNLYRVGGDEFVIICPDVEEAEFRDIIQKLKDTFNRE ECKAAVGYEWTHSCRNLKAIIRSADQKMYEDKEQFYQQHAEGGRYRH >gi|312957472|gb|AENW01000004.1| GENE 153 157444 - 160077 3071 877 aa, chain - ## HITS:1 COG:SMc00025 KEGG:ns NR:ns ## COG: SMc00025 COG0574 # Protein_GI_number: 15964685 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Sinorhizobium meliloti # 4 876 3 888 898 1033 57.0 0 MGKKYVYLFSEGNGQMRELLGGKGANLAEMMNLGMPVPFGFTVTTEACNQYYADGEAINE AIRKEIFDYLMKLEELSKKQFGDPKNPLLVSVRSGARASMPGMMDTILNLGLNDEVVEGV ARLTDNPRFAYDSYRRFIQMFADVVMGLNKAKFEDIIDEMKEKKGVEQDTDLDADDMKEM VKRFKKFYKDSLEEDFPSDPKEQLYRSIEAVFRSWNNQRAIFYRKMNDIPGDWGTAVNVQ MMVFGNMGNDCGTGVAFTRNPSTGENKLYGEFLMNAQGEDVVAGIRTPQTIDQLKEIAPA AYQKFTEICAALESHYKNMQDMEFTIEKGNLFMLQTRNGKRTAASALKIACDMVDEGMIT KEEAMMMVEPKQLDSLLHPRFDDADLKSAKPIASALPASPGAACGQIVFSAEEAIEETAL GHKVILVRLETSPEDIEGMHVSEGILTVRGGMTSHAAVVARGMGACCVSGCGDIKINEEE KYFIVNEERYNKGDYISLDGSTGNIYGRKIKTVPAEISGDFERFMKWADEIRTLKVRTNA DTPKDAAQAVAFGAEGIGLVRTEHMFFEGDRIKAVREMIVSKTEGQRRKALSKLLPMQRG DFEGIYEAMHGLPVTIRYLDPPLHEFLPTSSYDIAQLAKDMNIDLDELKSVISGLHEFNP MMGHRGCRLAISYPEIAEMQTTAVIEAAINVNRKHPEWKIEPEIMIPLVGDKAELKFVKD VVVRTADEILKREAFDMKYHVGTMIEIPRAALLADEIAEEAEFFSFGTNDLTQMTFGFSR DDAGGFLNDYYEKKIFEQDPFARVDQKGVGKLIEMAVAGGRKTRPEIKLGICGEHGGDPS SIDFCHRMGLSYVSCSPFRVPIARLAAAQAAINHKKG >gi|312957472|gb|AENW01000004.1| GENE 154 160402 - 161310 1122 302 aa, chain + ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 139 1 118 195 68 29.0 1e-11 MKFGEKLQKLRKEKGMSQEELAARLHVSRQAVSKWENDQGYPETEKMLMIGNIFSVTMDY LLKDEGGDQPQEQGFYASRECVQGYLQQEKRITLRIAVGTLLCILSGLPILIFPQLEDVM SVFSMLIIALGIAVFVSLSFDKDEYKILKQEPLYFDHDYLQELKGEHDGLQKKFKRLIIG GLLLIFLSCIIAMISEDVLHMEEGLLDAVYLLLISTAVFLFIYAGCSMDTYELLVDNEAY RKKKHGERFSWLYYVTIGCASILYVGLGMLFGKEAWRTGWILIAVTWLVTYGIVSGISMR KK >gi|312957472|gb|AENW01000004.1| GENE 155 161526 - 162374 827 282 aa, chain - ## HITS:1 COG:CAC0781 KEGG:ns NR:ns ## COG: CAC0781 COG4296 # Protein_GI_number: 15894068 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 5 282 10 276 276 97 33.0 2e-20 MWKERTEKKKFEEGFAEEIKEIYALTQDDAGSCRMKGERCWTVSMRLLAHIDGKTAELKQ EKKVLQWMLSEKENKKPGKVFRLKKETIYRLKVRESLPKKTIWSNQEIPAGACLLLVDVL ERNVKQPQLQELLKEYQKPVFLSLSDTCQLQLNRSLSMFQGEGEWNAQKAEILLDTDGHD DKRADKALTVFRRLQEDAAAWDKKARRYAAEQLLSCAIEWQDEDEDELCADEFIRRIRIE SVNVSQDGEFELYYDDGGIFAGHVIIVSGNMDKGLYDAQFAG >gi|312957472|gb|AENW01000004.1| GENE 156 162533 - 163807 1657 424 aa, chain - ## HITS:1 COG:BS_pgi KEGG:ns NR:ns ## COG: BS_pgi COG0166 # Protein_GI_number: 16080187 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Bacillus subtilis # 19 423 25 435 451 480 55.0 1e-135 MMKLDTKHAFLKEDIAGYQDIVTKCHEDLHNKTGKGNDYVGWVEWPNNYDKEEYARLKSV AADIREKCDVLMVCGIGGSYLGARAAVEMINGMYSDKKPEIIFFGNTFSSTYIAQVMEYI KDKEVAVNVISKSGTTTETALAFRLLKQFMEEKYGKEEAAKRIVATTDKARGTLKTIADK EGYETFVIPDDIGGRFSVITPVGLFPIAVAGIDTDAIMTGLKKAYEDLKDPDLSKNDAYA YAVSRRILENQGKDVEMLVSYETQMTMVAEWWKQLFGESEGKECKGNLPTSANFSTDLHS LGQFVQDGKKVLYETLLLIDKPTLDLNFPEDADNLDGMNYLAGKSVDWVNKMACQGTLEA HEETGGVPNLILTLDDMSAESFGYMCYFFFKACAITCYMLDINPFNQPGVEVYKKNMFRL LGKK >gi|312957472|gb|AENW01000004.1| GENE 157 163823 - 164176 482 117 aa, chain - ## HITS:1 COG:lin2468 KEGG:ns NR:ns ## COG: lin2468 COG1098 # Protein_GI_number: 16801530 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted RNA binding protein (contains ribosomal protein S1 domain) # Organism: Listeria innocua # 3 117 4 117 117 94 43.0 3e-20 MHYMVGEVVEGVVTGIKPYGAFVYLDSKHNGLIHISEISERFVRDVHTYVKVNERVKVKI LDVDEDGMHFKLSLKAVEANKARSMRKRRFVHELPQMNIGFTSLAEHLDQWIEEATK >gi|312957472|gb|AENW01000004.1| GENE 158 164423 - 164878 482 151 aa, chain + ## HITS:1 COG:L26878 KEGG:ns NR:ns ## COG: L26878 COG1963 # Protein_GI_number: 15672981 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 7 146 13 146 147 101 39.0 4e-22 MSSIYPLVAALLANVIAQVLKPIVLYFRTKELDVHQCIACGGFPSSHSSTVTALTIAIGM NEGFDSALFAITCVFSFIVIYDAANVRYYAGRNIQLTKQLISDLETLKGLKFNDPIYHEK IKSVLGHKFIEILGGILLGILVSLSMYQLIH >gi|312957472|gb|AENW01000004.1| GENE 159 164895 - 165125 399 76 aa, chain + ## HITS:1 COG:BH3419 KEGG:ns NR:ns ## COG: BH3419 COG0694 # Protein_GI_number: 15615981 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Bacillus halodurans # 6 72 9 75 79 68 53.0 2e-12 MQTKIDEIKQTIEKIRPYIQRDGGDVEFVSFEDGIVGVRLLGACVGCMSIDDTIQGGIEA ILLDEVEGVSGVALIE >gi|312957472|gb|AENW01000004.1| GENE 160 165226 - 166227 1319 333 aa, chain - ## HITS:1 COG:no KEGG:Ccel_3208 NR:ns ## KEGG: Ccel_3208 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 8 333 11 337 338 150 30.0 6e-35 MPDFEKVIVHVLDCEQNTCIMSTACMQELQPEVEKMMQTKASKVFSSSSKKSGKFKESSQ VKQWLDSYKLQEQSFEQLSELLARHIFDAKLRCALYYPSDLLIAQVMEEGRRYLLVIDNA YSEGITHTLVQEEAGMRNEIIPYRTLLSSSLVKADKAFLVELSDYALHCVESKVEIEAEK VNFFADIILESTTSPSYKEAVSSLAKITEEISDKYDLNQMEVVPKMKSIIKENIEQQTPI EIEEVAELLFAEKPLARDDFREELRKQGVEKPIEVEYVKPARSDKVQKIKTDKGIEIIIP VDYMNSRDFVEFKNQPDGTISIQLKNITRITSK >gi|312957472|gb|AENW01000004.1| GENE 161 166413 - 166973 502 186 aa, chain + ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 20 166 20 162 173 124 44.0 1e-28 MQKAIFSRIDLNNADNDLAQEYLSCIRDLLHLHDVQDLKAFTQHMNTSRFQHSLNVSYYT FLIARRFHLDSCSAARAGLLHDLYHYDWRNLDKEERPIEGRHCAVHPQIALENARKATFV NTIIEDAIVHHMWPMTLRCPKTKEGWVLQAVDKYCAISEILLQGGRRVRYSRLAISLAAL LSFSIR >gi|312957472|gb|AENW01000004.1| GENE 162 167146 - 167439 497 97 aa, chain - ## HITS:1 COG:no KEGG:CLL_A1651 NR:ns ## KEGG: CLL_A1651 # Name: not_defined # Def: putative lipoprotein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 9 82 55 130 142 66 43.0 3e-10 MKKEALRNILPLGSVITLKKGRKKLMIIGRIQEERSSGILYDYAAVLYPEGILDASELYM FQGEDIDRIYHVGLQEEEEFAFRSYMEQKLKELKLLE >gi|312957472|gb|AENW01000004.1| GENE 163 167456 - 168373 975 305 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915572|ref|ZP_02077783.1| ## NR: gi|160915572|ref|ZP_02077783.1| hypothetical protein EUBDOL_01580 [Eubacterium dolichum DSM 3991] # 1 305 1 290 290 188 39.0 3e-46 MIKIHTGKLLQLQQSTQQTWKQSSRLSASVYQLQNILGQTTQLNRLSVLQRQLSAQLYQL QAFFHESQMQYESMEQRLLKQAGQLRTAASLSSDSDWSDAWYTRKDSWKTTHRTHTTFGN GRSLVDYAKNGICAGIFGGFDAFRYAVGKNSKYTSANAQFTLGSAHMSVDGKGLLYDDGT WNPQLQLEAEAEAALAQLKAGFDIGTSYVHAGIEASVGVGVAKGAAKAVIKKDEVTLKGE IGVAAVQGEVKGKFSLFGADITLSGTGELGAAGVGAEFSSKTGEVEFGGKASLLAGLGFK VKINY >gi|312957472|gb|AENW01000004.1| GENE 164 168385 - 168564 292 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANGYLQQLYALQTQLRQQTVMLPSAAQGAELPLLQRQYRNVLHNVQEQIRICEGLRML >gi|312957472|gb|AENW01000004.1| GENE 165 168581 - 168874 233 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401000|ref|ZP_06645145.1| ## NR: gi|293401000|ref|ZP_06645145.1| hypothetical protein HMPREF0863_01285 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 97 1 97 98 125 70.0 1e-27 MDQLQITLAQVTQTAASIRSQNQQLNSCLQEIGTSMNQLAAYWQSPASEKIRSRFHGMLP VFDNYRSIVESYAKFLDQTVSTYQSMEAQLNASAEGF >gi|312957472|gb|AENW01000004.1| GENE 166 168885 - 169187 450 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401001|ref|ZP_06645146.1| ## NR: gi|293401001|ref|ZP_06645146.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 100 1 100 100 112 65.0 6e-24 MSIKIQVDPARLDSAAGQIEQQTLSYEKNYRRLFQEVAAMGSGWQGKDNQAFVSQIQGFE KDFQQMAALMREYAAFLKLSAKTYRQTQDERAQMARRLVN >gi|312957472|gb|AENW01000004.1| GENE 167 169198 - 169452 278 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDERILVEVYVPAVQQGMEVLLPAQAKLGVVHRFVSRLLEAAWHLEKGSLKDAIWYLEQQ DSMPDFALCVKDAGIRNAERIIIL >gi|312957472|gb|AENW01000004.1| GENE 168 169445 - 173560 2958 1371 aa, chain - ## HITS:1 COG:CAC0039_2 KEGG:ns NR:ns ## COG: CAC0039_2 COG1674 # Protein_GI_number: 15893337 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 309 1119 74 958 1286 344 29.0 8e-94 MQRIKLCVLQDKGIQTVLLINQRKTVPVYQYRDVAVQAVWRIGGWSFHVTQSASPLYQLH KKEIEPGFHCVIALEGQRIRFYAEELCANALRFHGYALVGIVHIGRSSTQELCLKSAGIS LCHALLQAKDTEWELVDQASTNGCYVNGDRITRHTVVPGDVIYLGNVMLLMGKDSIFVPE QIADTRLSEISYCKTVIEEKEAGTAICLTPEPVQKLTMEIELPLAKGTQENLPAIFVLGP SITMGLSSTAMGLFSFWLAAERKQDLLSVVPTLLMSLSMALGTILWPLLSKRYERKQQRR KEEKRCYVYSCYLLEVKQRIQQAMQEETAYLQHWYPPVSKLCVDFLAQKPYRLRCVNHAD WLHVVLGQGSCPAGVDLQIPHVSSMTQDVLLDKLHGLQAGQFRLENVPIVADLRECQSLC LEGERSVCIDTLLNILLQLVIQQPEKETRICIAADKALISREKLFCLPHLFVDRQRLLVW DETSAGRCRRLLEAVVDDEGIKDVIVCILEPCLTDSLQLPAHEKIHQLRWSDTLNNAADL QLQINGRSVRWPQRHADFTIDTCTERQRRAAFVQRSAYPKDSARGKKMLSFLKLFHCHSV EELQIASRYQGSDAAKSLRVIIGQSADGGELYLDAHEHSHGPHGLLAGMTGSGKSECLLT YLLSLAVTFSCQDVSFLLIDFKGGTMANALAKLPHTAGIITNLDKGILMRCMCAIEGELT RRQQQLADTGERYGISSMDIDKYMQLRKQHPSLTAMPHLFLVADEFAELKQLFPAVLDHL RQCARIGRSLGIHLLLATQKPFGVVDEQIWSNARFRLCLKVADRNDSMDMLKKDSAVHLQ HPGQLFLQVGHDEVFVQGQSAWTQAPYDPCGKEASDLYLSYYDSDGNMQDLPMAGGTVAK TELEAVCDALCAISTERAAPLWMPPLKPNLQQEELPAKETALTLGLLDDLAHQQQIPFSM SVWDGRNLAVCGMVGSGKSMFVETLIQSCLVKSENILYLFDFDKPLFMKYAQYQQVAAVF QREDAEGIQSFFSFMRRMIKQRRAQRSEQGILCILHNYEVFHELYQELEEELLYLLREGK KYGIVCCITTAVLQQIPMRIQACLEDWYALQCAQHEDYSYLFSCEQSCIPLTQPGCGLMK YNDTLCMFQIAVYRKEAWMKASRSQTPPAYAVPRMPAHVSHPLAMQCDSSFLGREIKTQE EIYTAYPTGRCLFLLAAYRLNDSFISLYLKQLETGGSVHIFSPHPLAKRKPSSLDTLDRL LKQPQKQYIVWHQLDELTLDTAFMKKLLEAEQLHHIFIETIPHLSAYSLWDWYAPVWLDA AVLWMGKGFQEHSYTLKRNVQTDKILKSKEAIYWEEDTCRILQLWEVEENG >gi|312957472|gb|AENW01000004.1| GENE 169 173548 - 173799 127 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQPRCLPGYSPKEAGTLNCDERSDIYSFGRTCYVLRHGQFPADGACRDALDALLLHCCQ EERNQRFGSMQAVMKELVRLCKG >gi|312957472|gb|AENW01000004.1| GENE 170 173738 - 174262 527 174 aa, chain - ## HITS:1 COG:CAC0404_1 KEGG:ns NR:ns ## COG: CAC0404_1 COG0515 # Protein_GI_number: 15893695 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Clostridium acetobutylicum # 4 149 28 178 306 71 29.0 8e-13 MNLRYQICACLYQGTACEVFLVRDIVTSQLYALKRIVRHHAKFSDAYLRAVYQREACMLG WLQHERIPHLISAFEEEQYRCILMEYIPGVSLSRIQGCSSEQKRLQWCLQLGELLQYLHE QQIVHLDIKPSNLQYWKGNVYLLDFATSRFLQEQDVAAAVSPRLFSQRGWYAEL >gi|312957472|gb|AENW01000004.1| GENE 171 174259 - 175257 1319 332 aa, chain - ## HITS:1 COG:no KEGG:Tgr7_2548 NR:ns ## KEGG: Tgr7_2548 # Name: not_defined # Def: FHA-domain containing protein # Organism: Thioalkalivibrio_HL-EbGR7 # Pathway: not_defined # 263 332 25 98 251 71 45.0 5e-11 MDAMLKHMEVRDDGFLEVVLKRTKDFDEYIFQQIHKDERCLLCVRDPRSKTRLYYDTKGY LTLKEYLQAHLFAERELLPFLLYVLEDMVQVNAGKPVSMRLEHVFLSYDGGLLRFLVFPL VVDNWLFQKEELKQFLKDLLDCVRVTQDFAALGFLGYCLRSEDLTLPQVLQGLHDLQAAQ AKPLGLLEKLFHITREEPFQVRDLPAPKTMAVPSFAIEEESGGYAVQKELESPTQELLAQ DCSCLVDLKSWNSIRVDKAQFTIGRAKDNDLVLSGKTISQHHACIEEGVLKDCGSANGTY INGERITSRELKDQDVIRFANLQFRWQKEEIV >gi|312957472|gb|AENW01000004.1| GENE 172 175390 - 175956 343 188 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401006|ref|ZP_06645151.1| ## NR: gi|293401006|ref|ZP_06645151.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 5 173 9 177 188 154 54.0 4e-36 MRPNQTLCIAGIWIINLNTLWFVKPLSQNLSHLGNALHMRWYLMLWAASAALYFYVYTRK WMASLEYRNRLGWLVLSLSCLGMVFSVLLPYAPYVHATLSKWHTRLAMGSTILYVLLIFH ILCELLTRDIAAFQKVAGPYAMLVVFELLLYLLNGGVSTLLEICFPMTMSLYLYTVNSSF SRRNRFSK >gi|312957472|gb|AENW01000004.1| GENE 173 176604 - 176936 301 110 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLQGKDIYVRNQTASRITDLCFLYPGGTAPHTVKKIPPHQHQLEFIYDFSIAGAKDLAF YFLDDEDTKFIFHKELDAEHQNQPLYVYITIQDGRRCVRRDPHGKELYQE >gi|312957472|gb|AENW01000004.1| GENE 174 176939 - 178354 1629 471 aa, chain - ## HITS:1 COG:BS_licH KEGG:ns NR:ns ## COG: BS_licH COG1486 # Protein_GI_number: 16080907 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Bacillus subtilis # 35 471 5 439 442 556 60.0 1e-158 MKTVSFFIYGWGISCYNAFAVVYTTKEDEMKKDLVKIVTIGGGSSYTPELVEGFIRRYDE LPVGELWLLDIEEGREKLEIVGALAQRMVKKAGLPKKVILSYDRREALKDADFVTTQMRI GRLPARVLDERIPLSHGMIGQETNGAGGMFKAFRTIPVILDIVKDMQELCPNAWMINFTN PAGMVTEAVLRYTDFKKVIGLCNVPVNMVAGIANILGVEEHRVTMQLQGVNHHIFATDVF LDGMSVMDEVVERYANVKPEDVLAMKNFISLPYSPAFIRGLHAIPCPYHNYYFFTKEQLE EEQEQFAKGNVRGEVVSRVEEELFELYKDEQLDVKPKQLEMRGGAKYSDAACNLIASIYT DKRDIQYVDVQNNGCISDLPDESAVEVACMITADGPKPLATGEMKPTISGTIHMIKAFER MVVEAAVTGNRDLAVTALNMNPLCPSDHLANIVVDELIEAHKEYLPQFRGK >gi|312957472|gb|AENW01000004.1| GENE 175 178632 - 179666 983 344 aa, chain - ## HITS:1 COG:no KEGG:BMB171_C4455 NR:ns ## KEGG: BMB171_C4455 # Name: not_defined # Def: hypothetical protein # Organism: B.thuringiensis_BMB171 # Pathway: not_defined # 30 297 33 298 327 73 26.0 1e-11 MQKSKEREYPIPFHNDVFFKYMLIGEDAGSAMLRSRIIEEIYGLKVQKTQVLNPELLPEA FFGKRAVLDVVLEDETGHLYDLEMQVSGYTKEEQLRFQQYGYRLVGRQLKQGDDYTKLKP FYQIIFMFAMPKDTGRMIRHYTVKDEDNREEPNGTLHRAIVFLPMIRQRVKEVGGIENLT EFETFCYVLAYNPDDAILNMKRRMVNVAMEKYNEMREDGSLFSWAESIEFAERAVQANLR EQTAEAERLGLEKGFQKGLEQGIEKGIVKGLEKGIEKGIEKGMEKGLEKGKRALLKSQIA HKYGKEDDWIDTLPDHQVEDAILHILECDTYDALKDRLKGKEVK >gi|312957472|gb|AENW01000004.1| GENE 176 180005 - 180688 1054 227 aa, chain - ## HITS:1 COG:BS_rncS KEGG:ns NR:ns ## COG: BS_rncS COG0571 # Protein_GI_number: 16078656 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Bacillus subtilis # 6 227 22 244 249 197 46.0 1e-50 MDTIFEWLKNQNIAYSDKKLITQALVHSSYVNEHKSYAHDNERLEFMGDAVLQLWTTKKL FLLEPELSEGQMTTLRAQLVCEEALAEYNRQLGLGKYLMLGVGEEKTGGRQRDSILADMF EALLGAVFLDQGMEAIDSILSAVVTPAISRPKSEKVIDYKTKLQEYIQSDSRKTVHYETV NVSGPSNKPEFEVIVMLDDINLGRGKGFSKKRAEQMAAKDAFEKMVK >gi|312957472|gb|AENW01000004.1| GENE 177 180728 - 182683 1998 651 aa, chain - ## HITS:1 COG:BS_ylpB KEGG:ns NR:ns ## COG: BS_ylpB COG1200 # Protein_GI_number: 16078650 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Bacillus subtilis # 1 626 26 653 682 505 42.0 1e-142 MQIMRAEDLLTCYPFRYEHLEAKPRDTWEKEDRIIFEAVIVNRARVIRFRGKQSVTRFKV MLEDEELDVSLFNRPWVSAFTMGKVITIIGKYDGGSRVTALQYNFKPMKEQLGIHPVYNV REGITQKELVRYIDKAWQALQNQIPDVIPKPYLEKYRLIPRKQALYFIHHPSSMEAVKQS LRHLKYEEFLKFQLSMQALKARDTEMVQGSAKQFSMGDVMDLKHSLSFSLTNDQNRVVEE ILQDLSSDKVMYRMVQGDVGCGKTMVAAFGLYACVLAHKQAVFMAPTEILAKQHLTNLKR LFSDFDITVDVLYSSLKPAQKKDVLERLKHNEIDILVGTHALFQDDVEYYDLGMVVADEQ HRFGVAQRKKMLEKGEKVDFLLMSATPIPRTLAISLYGDMDVSTIQELPKGRSTVTTKLI SSRSMSPILEAVLEKIDEGDQCYVVCPAIEKNEDMDMRNVTEIYDGMCASLGRRYRIALL HGKMNTQEKDAVMERFLHREVDILVSTTVIEVGVDVKAANIMVIYDAHRFGLSQIHQLRG RVGRGTRPGYCYLLSSTKDPDSLQRLKICEQTRDGFAIARADLQLRGPGDILGTRQSGVP GFILGDVIQDANILEVAREDAAEILAHLDTIGYEEIKMYVEHAVGSATYLD >gi|312957472|gb|AENW01000004.1| GENE 178 182862 - 183512 667 216 aa, chain - ## HITS:1 COG:aq_202 KEGG:ns NR:ns ## COG: aq_202 COG0127 # Protein_GI_number: 15605763 # Func_class: F Nucleotide transport and metabolism # Function: Xanthosine triphosphate pyrophosphatase # Organism: Aquifex aeolicus # 1 72 1 69 202 59 41.0 4e-09 MNILVGTTNRNKVRSVQRYLQAYDVQLVTPQDVQLHVRIEEDGATPIENARIKALAYYRS ARIPTVAFDSGLYFLDLKEDDPLQPKTHVRRVQGRELNDEEMISYYRRIAADFGGRLLSA YRNGVCVVYDEQHIYTYMEDMETARDFAFYLCDTPHEQRTPGWPLDSISIDAKTMKYFHD MADTEYAAAGEDEKRLTSYRNMLAFYRRAFHLEETS >gi|312957472|gb|AENW01000004.1| GENE 179 183509 - 184489 786 326 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEESIRELSCFQQYATKLSEQGIWMKAAEACIVKELLEADKQLPELELLTNSSVVEFIM MNIVKDAAHEEKDITLSRVMETIEELASANTEEEALPLMTEFVNNLRRLLKKKRTRDIRK LTTTDKNYYEIENLLNELDMHLMNASSYPWSQALLVDVLRSVDLDSITKGNYERAYADIY EMHEDQEACDACYNRLIKHSPEDANILYGWLTQLWQRRDYDACYDMIIRGLQLQDSFFQE MFLDIARDIAEQTGDDSAYVQWKKQYGKRDTYKQNLTDTRVNKVQLPLDTSAYTDAKPNK PCPCGSGKKFKACCKNILDKTEAQGV >gi|312957472|gb|AENW01000004.1| GENE 180 184486 - 185349 730 287 aa, chain - ## HITS:1 COG:no KEGG:CLJ_B1117 NR:ns ## KEGG: CLJ_B1117 # Name: not_defined # Def: radical SAM domain protein # Organism: C.botulinum_Ba4 # Pathway: not_defined # 2 278 8 296 297 233 39.0 8e-60 MQFKRIYVEITNTCNLSCSFCIQNQRKPRRMSVAQFSHVIREIKPYTGHVYLHVLGEPLS HPDLKTFLQICDEQEMQVNLTTNGTLLNACRDVLMNSRLRQVNVSLHSFPEHEQPQYLEH VFSVCEELAQKGVHISYRLWSVQNGQLSGESTRLLQQLTQHYHISHPQEFEKRMRLDVGD HLHLNLESVFQWPSLQHPYVSDYGRCLGMMQMCAILSDGTVVPCCLDSRGDAALGNIFTR SFSSILNSERAVQMKAGFAQHNIVEELCKHCSYRLRFTEHKRGEKSV >gi|312957472|gb|AENW01000004.1| GENE 181 185361 - 185681 232 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCRDTTKEDLLFRFMKTYSVKEAMALKTLNEYHIKITRQQIDFARNRMKGIRANNKRKRV HRKERKQRLLEEKEYQAYKEDVCLRFMETGQVYTLEEYAIIKEEFF >gi|312957472|gb|AENW01000004.1| GENE 182 185921 - 187255 947 444 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 30 444 5 422 447 369 46 1e-101 MKHFEEHVEDVSLILDEEECSDTKQTDMILDVGDRPPLLQWLFLSFQHVFAMFGATILVP TLTGLPVSVALFASGVGTLIYTFVTKRKVPVYLGSSFAYISAVVIAIKAMGGSVDAAQTG LMLVGVIYVVVALIVRVIGKEWIDKLLPPIVIGPMIAVIGLGLAANAVSNAQFIKDGDPR AMIVAIVTFLIAALISTKAKGFFKIIPFLIAILGGYVLSLCLGLVDFQAVVNAKWLSFPD FILPFKIGNFRTYNLYFGPETLAILPVALVTISEHIGDHTVLGKICGRNFLKDPGLERTL MGDGIATAVSAFLGGPANTTYGENTGVIGMTKISSVYVTGGAACIAILLSCVGKISAFIS TIPACVLGGMSILLYGVIASNGLRVLVDNKIDFGKQRNLVIASAMLVIGLGGAILPVGSF MTLSGTALSALVGIILNLILPKAS >gi|312957472|gb|AENW01000004.1| GENE 183 187368 - 189941 2840 857 aa, chain - ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 8 837 15 866 893 643 44.0 0 MPYRMNIQEVVQETYSDLDKGLSEQEAAARLRDQGKNELLKKKKETVFQMFLEQFQDPMV IILIIGAIVSIFLKEYIDASIILTVIILNAIIGVVQEFKAEKAIDALEKLSTPKAFVVRE GFLKEIDSKELVVGDLVELEVGGYIPADMRLVSSVNLKVEESTLTGESEAVEKDAALVYD EEINISDQRNMVFMSTYVTYGKARGIVVRTGMSSEVGKIARMLDETKEDMTPLQVRLAHL SKILGIGSVGICIAMFVVAVLQGRDLFDMLLLSISLAVAAIPEGLPAVVTIVLALGVQVM SRNNAIIRKLHAVETLGSVSVICSDKTGTLTQNKMHVVSSYANGALQNRSEELLRGFCLC NNATVQKEEILGEPTEAALMAFCEENGMHKDAEDLSYVRVNEISFDSTRKLMTTIHQHGK EYVAFTKGALEKVLDLCTQVRMDGTTVRMSSYEKNRILEASKKVSSDAQRVLALAMRSLK SPHESAVESKMTFIGFAGLIDPPREEVRDSIRLCHKAGIQVVMITGDHPLTAFAIARNLG IAKTEQQVITGKELDEMNEETLAQHVQSYCVYARVTPEHKVRIVNAFKKHQLVVAMSGDG VNDAPSLKNADIGIAMGKTGTDVCKQASDMILADDNFATIVEAVEQGRNIYLNIQKAVLY LLSCNLGEIMSLFLAIVFMPHVVSTLSAIQILWVNLVTDAFPALALGVDPMDKFIMEEKP RDRRESLFAHGGMIFTIMNGMFIGTITLVAFRNGLDVSPAKAQTMAFMVLSISQLFHALN LRSRTHSILEVGIMRNKWLILTMVFGITLQIAVCQLPIFNMLLKTVPLDMSSWTMVLGMS FSIILINEISKWIAKER >gi|312957472|gb|AENW01000004.1| GENE 184 190227 - 190646 501 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915451|ref|ZP_02077662.1| ## NR: gi|160915451|ref|ZP_02077662.1| hypothetical protein EUBDOL_01459 [Eubacterium dolichum DSM 3991] # 6 135 15 143 146 106 40.0 4e-22 MLARNEFATAVLHRFECWMEHHPADLVLVSTAQKNHPQLEHFVDAMKRTTVLASPAQFEF QGVRGDLRNGFLCVEGFPEMQSFSGSFVAYDTKRAACERIYLELFMEHDASDMDSFVEEL EEMLSEKLQMLQKKKSILS >gi|312957472|gb|AENW01000004.1| GENE 185 190679 - 191776 1385 365 aa, chain - ## HITS:1 COG:BH2558 KEGG:ns NR:ns ## COG: BH2558 COG0206 # Protein_GI_number: 15615121 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Bacillus halodurans # 3 365 5 377 382 305 51.0 9e-83 MSDLQFEQVANIKVFGIGGGGCNAVNRMVSEGVKGVEFYVANTDLQALNISPVENKIVLG REVTKGLGAGANPEMGRRAAQENENEIREAIKGSDMVFITTGLGGGTGTGAAPMFAKIAK EEGALTVGIVTKPFTFEGKKRMKSAEDGLAELKQYVDSLIIVSNNNLIEVIGRRPLTEAF QAADNVLRQGVQTITDLIAVPALINLDFADVRTIMENQGSALIGIGMAEGEDKARAAAEK AIQSPLLEAQITGASNAIVNITGGESITLFDAEDAMALVREAAGNDIDAIFGVAINEKLG DSIIVTVIATGFDKEEEEEEEIPAASAFTQPVSRPSARVQTEEKPRYQELEEDDREGIPS FFSRR >gi|312957472|gb|AENW01000004.1| GENE 186 191799 - 193055 1521 418 aa, chain - ## HITS:1 COG:BH2559 KEGG:ns NR:ns ## COG: BH2559 COG0849 # Protein_GI_number: 15615122 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Bacillus halodurans # 1 364 1 367 425 122 26.0 1e-27 MNKKEIYASIEVADHEVRLVVGEFYETRFNILRVEKAPIQGIEKQKIMDEQNVVNGIIKA KKQAEDALGYHIERVLAAIPSVNVQRHNKKVSVVPEASSKRIRLSDIQKGLNEAVSFKPD PQLELVNIGCVKYITNGITSRKMPIDETAEVLIMNVDLLYADKEVVYAYARCIEKAGLEI LDVCLDSYAMANEAAVFEQTVDKYVIQIDLARDHTTLSLFTHGKLVNCEVIEDGYGVWLQ DLIEQYHLSSNVSYRLAQNTCTFDADSAKDQIIYIWSKSGEQKQISEKQACEAIVPYVKS WLNMINETCAPIIESGDVRYLLSGEGCEIPSLQELLRYLNAPAQIYVPQTIGVRDCSYVT CLGLFYSWREQMAIRRDERVCCNPQEVEETMDTVTKKSSVDEEGGFTRKLKSILLSDK >gi|312957472|gb|AENW01000004.1| GENE 187 193229 - 194650 1535 473 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2307 NR:ns ## KEGG: EUBREC_2307 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 32 389 44 420 673 106 30.0 2e-21 MKKFKLKFIKMAAVFIVAAGIWNLSGFIHAASLSVTASASTIYVGDSVTFTVSASGGAGN VSVSGAANGTYWLENSSQSFTVTASAEGTLTVSASGTLGDFNTEEDVTVSGSASVQVVAR PTETPKNETPQKQETQKPEEKKQEEKKLSSNANLASLSISQGTLSPKFSASKTQYTVNLN GDVSSIKVNATAADSKAVVYGTGTKSLKPGKNTISVSVAAEDGSTKEYTITVNVDETPLV YVSYNGAKLGFVRSLDGVDKPAKSFEAVKIKVDGKEVKAWKSNLLKKTVVYLQDDKTKEK NYYIYNTDTNTVETMLRPMALLGNNVFVVDVPKNLQTREGMNFTTVKIDNYELNGWTFKD TAFENYALIYVMDEKGNMVYYQYEATEKTLQLYSGAATIPQSAYDQYRKDVDASLKKHKW VIYGLAGGCVVLAGLSAFLFFRRKKTVKYQKRTISDSRRDAEADALRNISDDN >gi|312957472|gb|AENW01000004.1| GENE 188 194655 - 196433 1917 592 aa, chain - ## HITS:1 COG:SP0965_2 KEGG:ns NR:ns ## COG: SP0965_2 COG4193 # Protein_GI_number: 15900842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 277 411 26 155 156 71 38.0 5e-12 MKKKIIVGIAALLCGGILLQQGYIGAQNSAEKEPEAVSSRLPENHVFKRIDENGKIIIED TAKLEAETKKEQAARENMAKVKGIGGARDIKYGVVNFKTKSDSGKNTSYTEVGTGYSGYT NGYYAADGAFLGYENNGTKVKFMLAGVVGLVDADEVEILNYEDEDTVQSVNYYICKNGNI YHSITLNIRQPYYTSTAMVGKQQSYMKSNTVYYSYDGHYFYTTYQKMIDDYKANTRKNSI NASKPYYNYYQYVSSRTKTSFTASDLNGYVKSYLDDLYNSKDTKMYNMGKYFIDYQNTYG AYALASFGVAVNESAFGTSSIALSKNNLFGHNAVDSDPGLANGYSSPQNSILDHDKYYVN LWYSTPKYSTYHGAFLGDKASGMNVSYASDPYWGESAAHWMWQLDEYVSGKSDAGSKKLV FKDQGAINIRKEATTSSASLYTTPKNGNMSFNILGKVKGESVSGSTDWYKIQLDVPLNSA RTAIDYSGNSYNFGNSYGYVHSSLLSENGYTSDSSGGSDSSNSSTAYKLGDVNNDGKITP ADYVKVKNHIMKKSTLSGKSLTAADVNKDGKITPADYVKIKNHIMGKSTIKE Prediction of potential genes in microbial genomes Time: Sat May 14 01:22:39 2011 Seq name: gi|312957266|gb|AENW01000005.1| Clostridium sp. HGF2 contig00028, whole genome shotgun sequence Length of sequence - 197141 bp Number of predicted genes - 196, with homology - 179 Number of transcription units - 97, operones - 46 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 463 - 520 3.2 1 1 Op 1 . - CDS 572 - 1987 1402 ## COG0534 Na+-driven multidrug efflux pump 2 1 Op 2 . - CDS 1991 - 2458 580 ## CPE0542 MarR family transcriptional regulator - Prom 2488 - 2547 6.4 3 2 Tu 1 . - CDS 2715 - 2951 56 ## - Prom 3071 - 3130 7.0 - Term 3144 - 3202 6.2 4 3 Op 1 24/0.000 - CDS 3283 - 4854 1882 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 5 3 Op 2 . - CDS 4851 - 5984 1212 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components + TRNA 6275 - 6361 75.1 # Leu CAA 0 0 6 4 Tu 1 . - CDS 6661 - 7362 881 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 7441 - 7500 3.8 - Term 7477 - 7504 0.1 7 5 Op 1 . - CDS 7507 - 7722 239 ## COG3763 Uncharacterized protein conserved in bacteria 8 5 Op 2 . - CDS 7788 - 8123 243 ## - Term 8282 - 8329 7.4 9 6 Tu 1 . - CDS 8340 - 9788 1470 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 9857 - 9916 9.4 - Term 9863 - 9900 -1.0 10 7 Tu 1 . - CDS 9924 - 10787 789 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 10999 - 11058 5.9 + Prom 10948 - 11007 6.6 11 8 Tu 1 . + CDS 11028 - 11618 645 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 11637 - 11663 1.0 - Term 11818 - 11857 1.3 12 9 Op 1 . - CDS 11913 - 12434 618 ## STH2124 hypothetical protein 13 9 Op 2 . - CDS 12444 - 13061 671 ## CE1032 hypothetical protein - Prom 13085 - 13144 5.3 - Term 13267 - 13316 5.0 14 10 Op 1 9/0.000 - CDS 13319 - 14227 1232 ## COG0078 Ornithine carbamoyltransferase 15 10 Op 2 13/0.000 - CDS 14239 - 15408 1347 ## COG4992 Ornithine/acetylornithine aminotransferase 16 10 Op 3 10/0.000 - CDS 15413 - 16276 1259 ## COG0548 Acetylglutamate kinase 17 10 Op 4 11/0.000 - CDS 16298 - 17515 1464 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 18 10 Op 5 2/0.045 - CDS 17532 - 18572 1125 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 19 10 Op 6 16/0.000 - CDS 18559 - 19953 1600 ## COG0165 Argininosuccinate lyase 20 10 Op 7 . - CDS 20043 - 21266 1568 ## COG0137 Argininosuccinate synthase - Prom 21300 - 21359 2.1 + Prom 21724 - 21783 8.4 21 11 Tu 1 . + CDS 21819 - 22997 1388 ## Lebu_1198 protein of unknown function DUF201 + Term 23050 - 23091 -0.8 - Term 23033 - 23082 2.4 22 12 Op 1 . - CDS 23150 - 23407 462 ## HMPREF0868_0924 glutaredoxin-like protein 23 12 Op 2 . - CDS 23467 - 24129 569 ## gi|293401558|ref|ZP_06645701.1| putative membrane protein - Prom 24150 - 24209 6.0 + Prom 24133 - 24192 3.0 24 13 Tu 1 . + CDS 24220 - 24978 747 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Term 24966 - 25007 1.4 25 14 Tu 1 . - CDS 25013 - 25192 291 ## - Prom 25212 - 25271 2.7 26 15 Op 1 2/0.045 - CDS 25293 - 25775 447 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 27 15 Op 2 2/0.045 - CDS 25779 - 26360 848 ## COG0778 Nitroreductase 28 15 Op 3 . - CDS 26405 - 27625 1288 ## COG0477 Permeases of the major facilitator superfamily - Prom 27657 - 27716 7.2 29 16 Tu 1 . - CDS 27737 - 28921 1091 ## Cphy_1590 XRE family transcriptional regulator + Prom 29295 - 29354 5.8 30 17 Tu 1 . + CDS 29374 - 30468 867 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 30622 - 30673 4.1 - Term 30610 - 30659 2.4 31 18 Tu 1 . - CDS 30840 - 31901 1042 ## COG2008 Threonine aldolase - Term 32105 - 32129 -1.0 32 19 Op 1 3/0.045 - CDS 32319 - 33866 1903 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase - Prom 33894 - 33953 3.2 33 19 Op 2 7/0.000 - CDS 33956 - 34735 1072 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 34771 - 34830 1.9 - Term 34755 - 34812 13.3 34 20 Op 1 3/0.045 - CDS 34836 - 35675 1028 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Term 35701 - 35728 -0.8 35 20 Op 2 29/0.000 - CDS 35748 - 36776 1276 ## COG2025 Electron transfer flavoprotein, alpha subunit 36 20 Op 3 2/0.045 - CDS 36791 - 37579 768 ## COG2086 Electron transfer flavoprotein, beta subunit 37 20 Op 4 . - CDS 37610 - 38749 1065 ## COG1960 Acyl-CoA dehydrogenases - Prom 38898 - 38957 8.0 + Prom 38973 - 39032 6.8 38 21 Op 1 6/0.000 + CDS 39092 - 40300 1500 ## COG0183 Acetyl-CoA acetyltransferase + Term 40307 - 40342 3.5 + Prom 40384 - 40443 5.1 39 21 Op 2 . + CDS 40497 - 41702 1353 ## COG0183 Acetyl-CoA acetyltransferase + Term 41705 - 41761 8.1 - Term 41693 - 41747 3.1 40 22 Op 1 . - CDS 41823 - 43937 2169 ## COG0370 Fe2+ transport system protein B 41 22 Op 2 . - CDS 43927 - 44172 320 ## DSY2611 hypothetical protein - Prom 44329 - 44388 6.8 - Term 44462 - 44505 3.6 42 23 Tu 1 . - CDS 44535 - 45671 1014 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family - Prom 45706 - 45765 6.5 - Term 45960 - 46008 1.6 43 24 Op 1 2/0.045 - CDS 46201 - 47154 1006 ## COG1897 Homoserine trans-succinylase 44 24 Op 2 . - CDS 47168 - 48433 1522 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 48456 - 48515 9.3 45 25 Tu 1 . - CDS 48518 - 49468 900 ## COG0673 Predicted dehydrogenases and related proteins - Prom 49549 - 49608 6.4 + Prom 49463 - 49522 6.9 46 26 Tu 1 . + CDS 49579 - 50256 843 ## COG2013 Uncharacterized conserved protein + Term 50262 - 50312 12.1 + TRNA 50659 - 50732 76.3 # Gly TCC 0 0 47 27 Tu 1 . - CDS 51080 - 51589 -126 ## gi|266625481|ref|ZP_06118416.1| putative PAS domain S-box protein - Prom 51674 - 51733 3.3 48 28 Tu 1 . - CDS 51851 - 53557 1676 ## COG4716 Myosin-crossreactive antigen - Prom 53645 - 53704 3.4 - Term 53673 - 53707 3.6 49 29 Op 1 . - CDS 53709 - 54773 1147 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 50 29 Op 2 . - CDS 54773 - 55195 462 ## 51 29 Op 3 . - CDS 55192 - 55593 375 ## 52 29 Op 4 . - CDS 55606 - 56067 488 ## gi|167760250|ref|ZP_02432377.1| hypothetical protein CLOSCI_02623 53 29 Op 5 . - CDS 56064 - 56357 359 ## gi|295099369|emb|CBK88458.1| hypothetical protein 54 29 Op 6 . - CDS 56375 - 57406 1090 ## COG1459 Type II secretory pathway, component PulF 55 29 Op 7 . - CDS 57419 - 58336 863 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Prom 58356 - 58415 5.6 + Prom 58538 - 58597 3.9 56 30 Tu 1 . + CDS 58805 - 59485 629 ## COG3409 Putative peptidoglycan-binding domain-containing protein + Term 59494 - 59529 4.3 + Prom 59495 - 59554 4.9 57 31 Tu 1 . + CDS 59696 - 59863 63 ## - Term 60054 - 60102 5.2 58 32 Op 1 . - CDS 60124 - 60258 92 ## 59 32 Op 2 . - CDS 60323 - 61117 507 ## COG0789 Predicted transcriptional regulators 60 32 Op 3 . - CDS 61192 - 62115 847 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 62150 - 62209 3.4 61 33 Tu 1 . - CDS 62220 - 63197 997 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 63272 - 63331 4.3 + Prom 63195 - 63254 5.2 62 34 Tu 1 . + CDS 63312 - 64367 746 ## gi|293401542|ref|ZP_06645685.1| conserved hypothetical protein + Term 64437 - 64467 -0.5 - Term 64648 - 64702 8.6 63 35 Tu 1 . - CDS 64731 - 66005 1418 ## COG3681 Uncharacterized conserved protein - Prom 66073 - 66132 11.4 + Prom 65958 - 66017 7.2 64 36 Tu 1 . + CDS 66116 - 67000 936 ## COG0583 Transcriptional regulator + Term 67045 - 67087 0.0 - Term 67084 - 67111 -0.8 65 37 Tu 1 . - CDS 67117 - 68088 1045 ## COG0280 Phosphotransacetylase - Prom 68113 - 68172 8.4 + Prom 68072 - 68131 5.3 66 38 Op 1 . + CDS 68271 - 68621 410 ## COG1416 Uncharacterized conserved protein + Term 68622 - 68649 -0.8 + Prom 68623 - 68682 8.5 67 38 Op 2 . + CDS 68702 - 69376 654 ## Cphy_3720 phosphatase + Term 69396 - 69427 3.1 - Term 69383 - 69414 3.1 68 39 Tu 1 . - CDS 69449 - 70336 1112 ## COG3588 Fructose-1,6-bisphosphate aldolase - Prom 70474 - 70533 5.1 69 40 Op 1 11/0.000 - CDS 70537 - 71277 886 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 71291 - 71323 1.6 70 40 Op 2 . - CDS 71339 - 73618 2539 ## COG1882 Pyruvate-formate lyase - Prom 73639 - 73698 3.8 - Term 74072 - 74121 6.5 71 41 Tu 1 . - CDS 74128 - 74949 803 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 74972 - 75031 6.8 - Term 75029 - 75067 -0.6 72 42 Op 1 . - CDS 75134 - 75892 560 ## COG2820 Uridine phosphorylase 73 42 Op 2 . - CDS 75905 - 77122 1011 ## COG0477 Permeases of the major facilitator superfamily - Prom 77268 - 77327 7.0 + Prom 77199 - 77258 6.0 74 43 Op 1 . + CDS 77363 - 78553 813 ## COG3835 Sugar diacid utilization regulator 75 43 Op 2 24/0.000 + CDS 78540 - 79292 278 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 76 43 Op 3 21/0.000 + CDS 79279 - 80046 269 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 77 43 Op 4 21/0.000 + CDS 80043 - 81050 584 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 78 43 Op 5 . + CDS 81047 - 81796 583 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 81853 - 81906 13.2 - Term 81841 - 81894 2.2 79 44 Op 1 24/0.000 - CDS 81975 - 85193 3551 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 80 44 Op 2 . - CDS 85195 - 86271 1189 ## COG0505 Carbamoylphosphate synthase small subunit - Term 86304 - 86346 10.4 81 45 Op 1 9/0.000 - CDS 86368 - 87006 998 ## COG0461 Orotate phosphoribosyltransferase 82 45 Op 2 5/0.000 - CDS 87007 - 87708 961 ## COG0284 Orotidine-5'-phosphate decarboxylase 83 45 Op 3 13/0.000 - CDS 87708 - 88616 1191 ## COG0167 Dihydroorotate dehydrogenase 84 45 Op 4 3/0.045 - CDS 88616 - 89362 812 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 85 45 Op 5 24/0.000 - CDS 89364 - 92579 3911 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 86 45 Op 6 7/0.000 - CDS 92581 - 93660 1418 ## COG0505 Carbamoylphosphate synthase small subunit 87 45 Op 7 15/0.000 - CDS 93657 - 94949 1421 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 88 45 Op 8 . - CDS 94987 - 95874 887 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 95999 - 96058 7.6 + Prom 96034 - 96093 6.5 89 46 Tu 1 . + CDS 96332 - 96715 222 ## CPF_0994 hypothetical protein 90 47 Op 1 . - CDS 97026 - 97454 432 ## gi|293400963|ref|ZP_06645108.1| hypothetical protein HMPREF0863_01248 91 47 Op 2 . - CDS 97441 - 98403 847 ## CDR20291_1685 putative exonuclease 92 47 Op 3 . - CDS 98449 - 99681 1324 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 99743 - 99802 6.2 93 48 Op 1 13/0.000 - CDS 100114 - 100935 505 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 94 48 Op 2 13/0.000 - CDS 100919 - 101692 538 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 95 48 Op 3 . - CDS 101714 - 102187 381 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 96 48 Op 4 . - CDS 102189 - 102926 532 ## COG0434 Predicted TIM-barrel enzyme 97 48 Op 5 . - CDS 102937 - 103353 224 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 103388 - 103447 12.9 + Prom 103324 - 103383 9.3 98 49 Tu 1 . + CDS 103535 - 104281 440 ## COG2188 Transcriptional regulators + Term 104282 - 104324 6.1 - Term 104266 - 104313 13.1 99 50 Tu 1 . - CDS 104369 - 105223 750 ## COG1408 Predicted phosphohydrolases - Prom 105245 - 105304 4.5 + Prom 105005 - 105064 2.5 100 51 Tu 1 . + CDS 105273 - 106172 741 ## COG0524 Sugar kinases, ribokinase family + Term 106226 - 106261 1.1 101 52 Op 1 . - CDS 106164 - 106709 570 ## COG0288 Carbonic anhydrase 102 52 Op 2 . - CDS 106739 - 107479 731 ## COG4932 Predicted outer membrane protein - Term 107531 - 107576 5.1 103 53 Tu 1 . - CDS 107589 - 107987 507 ## - Prom 108031 - 108090 4.7 - Term 108110 - 108146 3.1 104 54 Op 1 16/0.000 - CDS 108155 - 108934 1150 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 105 54 Op 2 34/0.000 - CDS 108959 - 109684 500 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 106 54 Op 3 . - CDS 109677 - 110333 861 ## COG0765 ABC-type amino acid transport system, permease component + Prom 110608 - 110667 5.9 107 55 Tu 1 . + CDS 110788 - 111294 608 ## COG3409 Putative peptidoglycan-binding domain-containing protein - Term 111390 - 111428 -0.1 108 56 Tu 1 . - CDS 111435 - 112052 642 ## gi|293400971|ref|ZP_06645116.1| hypothetical protein HMPREF0863_01256 - Prom 112197 - 112256 6.1 109 57 Op 1 7/0.000 - CDS 112264 - 113118 1095 ## COG3711 Transcriptional antiterminator 110 57 Op 2 . - CDS 113157 - 114761 1578 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 114840 - 114899 5.5 111 58 Op 1 4/0.000 - CDS 114995 - 115390 353 ## COG4687 Uncharacterized protein conserved in bacteria 112 58 Op 2 13/0.000 - CDS 115441 - 116355 1161 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 113 58 Op 3 13/0.000 - CDS 116376 - 117194 1086 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 114 58 Op 4 . - CDS 117214 - 118194 1310 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 118357 - 118416 5.4 - Term 118608 - 118649 -1.0 115 59 Op 1 . - CDS 118753 - 118923 212 ## 116 59 Op 2 22/0.000 - CDS 118951 - 121098 2452 ## COG0370 Fe2+ transport system protein B 117 59 Op 3 . - CDS 121151 - 121369 407 ## COG1918 Fe2+ transport system protein A 118 59 Op 4 . - CDS 121383 - 121595 390 ## CLD_3534 putative ferrous iron transport protein A - Prom 121633 - 121692 4.8 - Term 121762 - 121794 2.0 119 60 Op 1 . - CDS 121802 - 122221 581 ## COG0716 Flavodoxins 120 60 Op 2 . - CDS 122238 - 122786 569 ## EUBELI_00570 hypothetical protein - Prom 122881 - 122940 9.6 + Prom 123243 - 123302 5.4 121 61 Op 1 . + CDS 123323 - 123664 268 ## gi|266623605|ref|ZP_06116540.1| putative heavy metal-associated domain protein 122 61 Op 2 . + CDS 123657 - 124061 345 ## 123 62 Op 1 . - CDS 124104 - 124283 267 ## gi|293401589|ref|ZP_06645731.1| rubredoxin/rubrerythrin 124 62 Op 2 . - CDS 124343 - 125641 1284 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 125683 - 125742 8.6 - Term 125905 - 125958 10.6 125 63 Op 1 . - CDS 125964 - 126782 887 ## gi|160914519|ref|ZP_02076734.1| hypothetical protein EUBDOL_00525 126 63 Op 2 . - CDS 126817 - 130485 3824 ## Elen_1817 coagulation factor 5/8 type domain protein 127 63 Op 3 . - CDS 130482 - 131771 1099 ## Elen_1817 coagulation factor 5/8 type domain protein 128 63 Op 4 . - CDS 131934 - 132110 129 ## - Prom 132210 - 132269 8.8 - Term 132400 - 132435 1.1 129 64 Tu 1 . - CDS 132484 - 135561 169 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 - Prom 135613 - 135672 5.7 - Term 135738 - 135789 4.1 130 65 Op 1 . - CDS 135830 - 136534 563 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 131 65 Op 2 . - CDS 136587 - 136814 225 ## lp_2889 hypothetical protein 132 65 Op 3 . - CDS 136855 - 137400 346 ## COG0655 Multimeric flavodoxin WrbA - Prom 137431 - 137490 2.9 133 66 Op 1 . - CDS 137541 - 137777 114 ## 134 66 Op 2 . - CDS 137774 - 138133 133 ## 135 66 Op 3 . - CDS 138164 - 138388 281 ## - Prom 138525 - 138584 4.8 136 67 Tu 1 . + CDS 138691 - 139590 934 ## COG0583 Transcriptional regulator - Term 139499 - 139546 -0.9 137 68 Tu 1 . - CDS 139633 - 140364 471 ## COG4925 Uncharacterized conserved protein - Prom 140461 - 140520 2.4 138 69 Tu 1 . - CDS 140523 - 141689 961 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Term 142262 - 142298 2.5 139 70 Tu 1 . - CDS 142486 - 142971 116 ## EUBREC_1157 hypothetical protein - Prom 143169 - 143228 6.5 - Term 143143 - 143194 -0.8 140 71 Tu 1 . - CDS 143321 - 143578 125 ## Tmz1t_0482 protein of unknown function DUF87 - Prom 143652 - 143711 4.7 - Term 143675 - 143713 4.6 141 72 Op 1 9/0.000 - CDS 143752 - 145383 2148 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 142 72 Op 2 . - CDS 145394 - 145753 503 ## COG1302 Uncharacterized protein conserved in bacteria 143 72 Op 3 3/0.045 - CDS 145832 - 146611 873 ## COG1589 Cell division septal protein 144 72 Op 4 2/0.045 - CDS 146599 - 147501 996 ## COG0812 UDP-N-acetylmuramate dehydrogenase 145 72 Op 5 31/0.000 - CDS 147508 - 148581 1194 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 146 72 Op 6 . - CDS 148649 - 149731 1352 ## COG0772 Bacterial cell division membrane protein 147 72 Op 7 . - CDS 149784 - 150500 955 ## Cphy_0452 hypothetical protein 148 72 Op 8 . - CDS 150581 - 151354 972 ## COG4509 Uncharacterized protein conserved in bacteria - Prom 151535 - 151594 4.3 + Prom 151401 - 151460 6.4 149 73 Op 1 2/0.045 + CDS 151491 - 151760 372 ## COG0640 Predicted transcriptional regulators 150 73 Op 2 . + CDS 151757 - 152410 536 ## COG5658 Predicted integral membrane protein 151 73 Op 3 . + CDS 152407 - 153132 301 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 152 73 Op 4 . + CDS 153125 - 154771 1634 ## CKR_2509 hypothetical protein 153 73 Op 5 . + CDS 154784 - 155344 692 ## gi|293400983|ref|ZP_06645128.1| conserved hypothetical protein + Term 155475 - 155499 -1.0 - Term 155462 - 155487 -0.8 154 74 Tu 1 . - CDS 155554 - 155727 82 ## - Prom 155832 - 155891 2.1 - Term 155863 - 155906 9.3 155 75 Op 1 35/0.000 - CDS 155944 - 157809 2231 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 156 75 Op 2 . - CDS 157802 - 160075 231 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 157 75 Op 3 . - CDS 160072 - 160536 665 ## TherJR_2682 transcriptional regulator, MarR family - Prom 160562 - 160621 6.0 - Term 160662 - 160701 1.2 158 76 Tu 1 . - CDS 160711 - 161976 1412 ## gi|293400988|ref|ZP_06645133.1| putative immunity protein BlpX - Prom 162004 - 162063 8.0 - Term 162229 - 162262 1.5 159 77 Op 1 . - CDS 162315 - 162890 133 ## gi|160915856|ref|ZP_02078064.1| hypothetical protein EUBDOL_01878 160 77 Op 2 . - CDS 162916 - 163659 362 ## gi|154503337|ref|ZP_02040397.1| hypothetical protein RUMGNA_01161 161 77 Op 3 . - CDS 163722 - 164324 303 ## COG3340 Peptidase E 162 77 Op 4 . - CDS 164380 - 165153 32 ## Lebu_1563 hypothetical protein - Prom 165220 - 165279 6.4 - Term 165329 - 165366 -0.8 163 78 Tu 1 . - CDS 165434 - 166105 401 ## Dred_0903 helix-turn-helix domain-containing protein - Prom 166149 - 166208 6.0 - Term 166157 - 166200 -0.9 164 79 Tu 1 . - CDS 166228 - 166467 95 ## - Prom 166642 - 166701 4.8 + Prom 166471 - 166530 2.9 165 80 Op 1 . + CDS 166643 - 167653 481 ## COG2946 Putative phage replication protein RstA 166 80 Op 2 . + CDS 167653 - 167856 207 ## SMU.1031 putative transposon excisionase; Tn916 ORF1-like 167 80 Op 3 . + CDS 167935 - 169128 555 ## COG0582 Integrase - Term 169199 - 169256 2.3 168 81 Op 1 . - CDS 169306 - 170868 1874 ## Ccel_1181 hypothetical protein 169 81 Op 2 . - CDS 170852 - 171562 272 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 170 81 Op 3 . - CDS 171559 - 172293 796 ## Cphy_3165 hypothetical protein 171 81 Op 4 . - CDS 172283 - 172621 456 ## COG1695 Predicted transcriptional regulators - Prom 172669 - 172728 7.3 - Term 173257 - 173305 -0.6 172 82 Op 1 6/0.000 - CDS 173312 - 173851 622 ## COG1045 Serine acetyltransferase 173 82 Op 2 . - CDS 173853 - 174737 608 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Prom 175056 - 175115 5.4 174 83 Tu 1 . + CDS 175198 - 176160 979 ## gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 + Term 176164 - 176211 8.2 - Term 176153 - 176199 7.1 175 84 Op 1 . - CDS 176267 - 176971 1049 ## COG3546 Mn-containing catalase 176 84 Op 2 . - CDS 177029 - 177541 648 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily - Prom 177687 - 177746 6.5 - Term 177809 - 177844 0.0 177 85 Op 1 . - CDS 177904 - 178086 231 ## gi|293402223|ref|ZP_06646361.1| hypothetical protein HMPREF0863_02502 178 85 Op 2 22/0.000 - CDS 178140 - 180155 2265 ## COG0370 Fe2+ transport system protein B 179 85 Op 3 . - CDS 180152 - 180388 441 ## COG1918 Fe2+ transport system protein A - Prom 180431 - 180490 5.6 + Prom 180672 - 180731 5.5 180 86 Tu 1 . + CDS 180786 - 182396 1698 ## COG2199 FOG: GGDEF domain + Term 182460 - 182511 6.2 - Term 182448 - 182498 5.4 181 87 Op 1 . - CDS 182654 - 183250 668 ## COG2214 DnaJ-class molecular chaperone 182 87 Op 2 . - CDS 183243 - 184079 796 ## EUBELI_02032 hypothetical protein - Term 184418 - 184458 1.5 183 88 Op 1 . - CDS 184523 - 184786 226 ## Cphy_3131 hypothetical protein 184 88 Op 2 . - CDS 184884 - 185633 691 ## COG3142 Uncharacterized protein involved in copper resistance 185 89 Tu 1 . - CDS 185735 - 186511 656 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 186591 - 186650 4.9 186 90 Tu 1 . - CDS 186707 - 187036 374 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 187177 - 187236 5.5 - Term 187180 - 187233 11.0 187 91 Tu 1 . - CDS 187239 - 188201 990 ## gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 - Prom 188241 - 188300 7.8 - Term 188362 - 188404 5.0 188 92 Tu 1 . - CDS 188409 - 190967 1718 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Term 191327 - 191376 2.5 189 93 Op 1 2/0.045 - CDS 191451 - 192092 920 ## COG0637 Predicted phosphatase/phosphohexomutase 190 93 Op 2 . - CDS 192070 - 192654 492 ## COG0500 SAM-dependent methyltransferases - Prom 192676 - 192735 6.2 + Prom 192609 - 192668 4.4 191 94 Tu 1 . + CDS 192711 - 194075 1222 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase + Term 194156 - 194193 -0.7 - Term 194144 - 194181 4.3 192 95 Op 1 . - CDS 194216 - 194524 403 ## gi|293402200|ref|ZP_06646338.1| hypothetical protein HMPREF0863_02479 193 95 Op 2 7/0.000 - CDS 194590 - 195162 975 ## COG2059 Chromate transport protein ChrA 194 95 Op 3 . - CDS 195159 - 195728 705 ## COG2059 Chromate transport protein ChrA - Prom 195778 - 195837 8.0 + Prom 195734 - 195793 7.4 195 96 Tu 1 . + CDS 195828 - 196724 1010 ## COG0583 Transcriptional regulator + Term 196767 - 196828 2.0 - Term 196767 - 196805 -0.6 196 97 Tu 1 . - CDS 196868 - 197101 299 ## Predicted protein(s) >gi|312957266|gb|AENW01000005.1| GENE 1 572 - 1987 1402 471 aa, chain - ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 3 437 1 432 448 281 36.0 2e-75 MKMSKEVDLGKERIGRLFFMLAVPAILSQLVNALYNMVDRMYIGHIPEVGATALTGVGIS FPIIMIISAFAALVAMGGAPRASILMGQQDIKGAEKILGNCCCALIITALVLTIAVIGFH TPLLYMFGASENTIGYAQSYMIIYAAGTIFVQLTLGMNAFISAQGFSRISMLTVVIGAIT NIILDPILIFVFDMGVQGAALATVISQGISSVWVMRFLMGKQTILKLRMSNFRIKAKVLL PSLALGVAPFIMQSTESILVLCFNSSLLKYGGDLAVGAMTILSSVMQFAMLPLSGFTQGA QPIISYNYGANNAYRVKKAFRLLLISCLTYSAVLWLLAMVVPNMFAAIFTSDPALTEITV WALRIYMGGCLLFGAQIACQQTFIALGNAKTSAFLAMFRKIIVLIPLIYILPMFIEDKVM AVFLAEPIADILAVLTTVTMFVLFFKKLLRNMDEEHVEEAKQQTQLEEKEA >gi|312957266|gb|AENW01000005.1| GENE 2 1991 - 2458 580 155 aa, chain - ## HITS:1 COG:no KEGG:CPE0542 NR:ns ## KEGG: CPE0542 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: C.perfringens # Pathway: not_defined # 18 145 21 148 150 75 33.0 4e-13 MLKHTNLETLVKRCAAFRKVYARISAPELKHYQLSPSEVDILIFLSNNRTINTAKELSAF LGISKGLVARGIESLLLKGYVYIETDNSDRRIQHLFLTEAAQEVIQVLLKKRSEVEAHIL KGIPQEHINIVLQTFDRINANIENIIETNEHTLEE >gi|312957266|gb|AENW01000005.1| GENE 3 2715 - 2951 56 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLSGFAFNFLSKYHNTCLCLSGSILQYAKSAYRLIGNKYIIQAITVPLNKSCLKRSSLH SRGPHLDYALLLTQHIFC >gi|312957266|gb|AENW01000005.1| GENE 4 3283 - 4854 1882 523 aa, chain - ## HITS:1 COG:CAC2849_1 KEGG:ns NR:ns ## COG: CAC2849_1 COG1174 # Protein_GI_number: 15896103 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Clostridium acetobutylicum # 1 209 1 209 250 240 61.0 5e-63 MSEFLEYVQSIQGQILSLSWEHVELTLFSVILAIAIGVPLGILISYLKKLTKPVLGIANI VQAIPSLALLGFAIPFLGIGSKPAIFMVILYSLLPIIKNTYTGIQSIPDQTLEAAKGIGM TRAQILIKVQIPMALPIIMAGVRISAVTAVGLMTIAAFIGAGGLGYLVYSGIRTSNNMQI LAGAVPACILALVIDSFMGILERVVVPEGLTIGNSQTNRPVRKSTKLIVSLLCLCLLMAS VGGRLMKGVSKDALHIGSSDMSEQLILGNMYADMIEAKTDYKVQRDLSLGGVQICFSALQ NGQIDMYVDYTGTLYGDILKMKSNSNADEVYRIAKDKIKEQYNLTLLDQTPFNDTYTFTV RKDTAEKYNLKTVSDLEKVSDRLTITPTLAFNNRKEALPGIKSKYPNMNFQDNIAMDGAT RYVALANKESDVIDAYSTDGLIDYYDLVVLEDDKQYFLPYYGVPMVSEHLLTEYPDAVGV INELSKHLSSEGMRKLNYEVDVKKREPAEVAHEFLVQEGLLEK >gi|312957266|gb|AENW01000005.1| GENE 5 4851 - 5984 1212 377 aa, chain - ## HITS:1 COG:CAC2850 KEGG:ns NR:ns ## COG: CAC2850 COG1125 # Protein_GI_number: 15896104 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Clostridium acetobutylicum # 1 369 1 368 377 386 50.0 1e-107 MLEFQHVSKTFKNQEVLHDINMEIHDGEFVVLIGPSGCGKTTSLKMINRLIAPSKGQILL NGSDIRNEDVIRLRRNMGYVIQQTGLFPHMNIEDNMEVIAKLEHVEQAQRRARTRELMEM VGLDYAEFSQRYPQELSGGQQQRVGVARAFALDPDIILMDEPFSALDPITRSSLQDQLLQ IQENVRKTIVFVTHDMDEAIKIADRICIMHDGNIVQFDTPEEILKHPVNEFVSSFVGKNR IWDSPELIRASDIMIKRVITTYPGVSLVRAYEYMRYNKVDTLMVVDHSQMLQGMITAKMI RRQPRDNHLLVRDIMVNPAYCAQEDDNLVDVMQQTRQHDFYNVPVLDEQGKLRGLITRSS LVTTFSKQFDLEEGEQA >gi|312957266|gb|AENW01000005.1| GENE 6 6661 - 7362 881 233 aa, chain - ## HITS:1 COG:BS_pbpF KEGG:ns NR:ns ## COG: BS_pbpF COG0744 # Protein_GI_number: 16078075 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Bacillus subtilis # 53 223 70 240 714 151 42.0 1e-36 MKIIRKLFLILLLIVLIALTLFVGLGFVNYVKATNEVSISEKVEEIKNKKSYVTYDEISE ELLQATVAIEDRRFYEHHGVEYRSMARALYQNVLAGQIRGGGSTITQQLAKNMYYTYQPS YLRKVSEIFTAYDLERELSKKEILELYVNVINYGDNYIGIKAASEGYFHKEPKDLTLDEA TLLAGLPQSPANYQLSNHESAARNRQIQVLNAMIRENMIDEQQKAAVMKQVEK >gi|312957266|gb|AENW01000005.1| GENE 7 7507 - 7722 239 71 aa, chain - ## HITS:1 COG:MYPU_1460 KEGG:ns NR:ns ## COG: MYPU_1460 COG3763 # Protein_GI_number: 15828617 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycoplasma pulmonis # 7 67 11 71 75 68 55.0 3e-12 MDFLSSVLFTLVGLAIGGFLGFYFTKKKFEKELRENPPINEKMIRAMFLQMGRKPSEAQI KQIMKSVNANR >gi|312957266|gb|AENW01000005.1| GENE 8 7788 - 8123 243 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLCYAIQPAFYDIMKQSGNIQALLEGMDEQQRSRIQIPIEMQSLQESAEAFFQKEIECR KDCLSYDHFLKSRVYVVYIREGAACMEDCTNPFYQLLKRKYRCLLVQEVDK >gi|312957266|gb|AENW01000005.1| GENE 9 8340 - 9788 1470 482 aa, chain - ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 133 429 78 379 450 154 35.0 4e-37 MSLFDHEARQFKFDVLREVSKRAFDGKLNDDVCDEVANLLIPGKHAEFRCCIYKEKEIIR QRTRMALGKPPVPVENDKKRHIVRVIEAACDGCSIHKIQVTDNCRKCMAKACLSACKFDA IHMGEDHAFIDYDKCKECGACKNACPFNAIVETQRPCMKSCPVDAIRMGEDGLAKIDEAK CINCGACQVKCPFGAIEDMSWMLDVIELLKKKEEVYAVFAPAIQGQFDSATLPQIMQAMR ELGFSDVYEAAIGADAVAWYEKEDAKKHKAEGKKITTSCCPAFVNMAKQHFPTVYESSVS HMVSPMVATTRYLKKHHPNCKVVFVGPCVAKKQEVQDSEVDFCITFEELGAMFVSRHISP ENVPAKEEDTASAYGRFFSVGGGVSKAVAVALKENNDEAVTAEYADGSDACKKALLMMKV NRFQADILEGMACQGGCICGPATIENMPKAKARMTKENLAIKDKTIASTLEKYDFSDIDL HR >gi|312957266|gb|AENW01000005.1| GENE 10 9924 - 10787 789 287 aa, chain - ## HITS:1 COG:FN1465 KEGG:ns NR:ns ## COG: FN1465 COG0697 # Protein_GI_number: 19704797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 2 273 11 284 291 132 31.0 1e-30 MILVVVTVVWGGGFIATDGALDALSPFYIMMIRFVGAAVFPLLICWKKLRRLDRATIGHG IVTGIFLFLAFAFQTFGLKYSTPSKNAFLTATNVVFVPYLLWLLWHRRPSRKELIASLLC IVGIALLTLKKDALMLGFGDMLSLVCALFFALHIIALERYSAHVDTVCMTALQMMTAGVI STICALTLEQPPTSFNWHAAGNVAYLIFVSTLLAYLLQTFAQKFTTANSASLILSMEALF ASIFSFLLLGEVMSPPMILGACLIFSSILYIEYKPARKKKDKQQDIC >gi|312957266|gb|AENW01000005.1| GENE 11 11028 - 11618 645 196 aa, chain + ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 192 1 192 192 201 56.0 1e-51 MRLLEEYIKKYGNALNEDVLKVDAFLNHQIDAQLMMELAKDFKEHFKDKHITKIATIETS GIAPAVMLGYLLQVPVVYFKKDTSRIMKDDLYTCQIHSFTKNKDYDIICSKKYLSADDHV LFLDDFMANGEACLGGIEILKQANAVIEGIGIVIEKAFQQGRLKVEAQGYPVYSQARIAS LSQGMITFVSEEYEVA >gi|312957266|gb|AENW01000005.1| GENE 12 11913 - 12434 618 173 aa, chain - ## HITS:1 COG:no KEGG:STH2124 NR:ns ## KEGG: STH2124 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilum # Pathway: not_defined # 1 166 1 166 179 122 50.0 5e-27 MSNQVKQLTLSAFFLALGLVLPFAFHSFGPQAGTVFLPMHIPVLLCGFVCGPAYGALVGM LTPLLSSALTGMPPLMPTGIAMCLELSTYGFLSGWMTKKLPLYPSLIITMLAGRAVSGLA NLVLLSMAHKAYTMQIFLTAAFVTAIPGIVLQLVMIPLLVSVVKKLEVRIAED >gi|312957266|gb|AENW01000005.1| GENE 13 12444 - 13061 671 205 aa, chain - ## HITS:1 COG:no KEGG:CE1032 NR:ns ## KEGG: CE1032 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 6 205 26 244 249 88 29.0 2e-16 MKKIVLLLMVSLLCACSANTETDKSEPNKKDAYCSDETDKSSACGIDESADMSGYKDFRE TKNQFVDSDMQEALSVFQKKESAILYFGYPSCPWCVEALPVMNEVAKADKQHILYIRTRD DKKELLYTPKQKLEMISYTKQFMEKDDQGEYQLYVPFVVVVKDGKAVSGHIGTVDGHDAH ERKMTEKETQELKKIYEDMFSAVTK >gi|312957266|gb|AENW01000005.1| GENE 14 13319 - 14227 1232 302 aa, chain - ## HITS:1 COG:PAB1502 KEGG:ns NR:ns ## COG: PAB1502 COG0078 # Protein_GI_number: 14521522 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Pyrococcus abyssi # 2 300 8 310 317 321 54.0 9e-88 MKHLLTLADLTKEELYDLLDLADSLKKEVKKGVFTPYLRNKTLGMIFTKSSTRTRVSFET GMAQLGGTALYLNANDMQLGRGEPIKDTARVLSRYLDGIMIRTYKHSDVEELAEYGSIPI INGLTDYVHPCQVLADLQTIREHKGTLTGLKMCFIGAGNNMANSLINGGILAGMEVACAC PLEYLPDEEITKRAQASGRFTLTQNVLEAAKDADVLVTDVWASMGEEQEAAQRRKIFEGI YQINDACMAVAKADAMVLHCLPAHREEEITEKVFEAHADEIFDEAENRLHAQKAVLVTLL KD >gi|312957266|gb|AENW01000005.1| GENE 15 14239 - 15408 1347 389 aa, chain - ## HITS:1 COG:TM1785 KEGG:ns NR:ns ## COG: TM1785 COG4992 # Protein_GI_number: 15644529 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Thermotoga maritima # 10 388 2 385 385 336 44.0 5e-92 MGIKENDQHYIAHTYARFDVVLTHGKGCRVYDENEKEYLDLTAGIGVNALGYADDAWVQA VASQAATLPHVSNLYYSQPDSDVAELLCERCGFTNMFFANSGAEANEGAIKVARKYSSDH YGSGRHEIITLVNSFHGRTITALSATGQDHFHQHFDPFTPGFVHAVANDIADLKSKVSKR TCAVMLEMIQGEGGVLPLEPAFVSAVAELCRERDILLIVDEVQTGIGRCGTLYAYEQYGI HPDIVTTAKGLGNGLPIGGVLLSEKVSDTFHPGDHGTTFGGNPIACAGAYVVLKRMDEAF LSAVQKKGAYVEQRLSEMPHVVQVNGLGLMRGVVLDGVTARDVVAACIEKGVLLLTAKDK LRLLPPLTITLDELKEAMDVMEAVLTQIA >gi|312957266|gb|AENW01000005.1| GENE 16 15413 - 16276 1259 287 aa, chain - ## HITS:1 COG:alr1245 KEGG:ns NR:ns ## COG: alr1245 COG0548 # Protein_GI_number: 17228740 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Nostoc sp. PCC 7120 # 8 285 16 291 297 273 52.0 3e-73 MKIDAIQKATILSKALPYIQKYNGKIVVIKYGGNAMKNETLKQNVMTDIVLLSEIGVHVV LVHGGGPEINGMLHKVGKQSRFVAGLRYTDEETMDVVQMVLAGKTNKDLVSLINQKGARA VGISGMDANCIEARQYTVDEGDLGYVGEIEEIHEELILDIIEKGYIPVVASVGCDAAGHA YNINADTAAASIAAKLHAENMILVSDIPGLLRNPEDEGSLIPRATLSEIEELKKDGVISG GMIPKVDCLVTAVQGSVQRAVIIDGRVPHSILIEMFSEEGIGTLVEE >gi|312957266|gb|AENW01000005.1| GENE 17 16298 - 17515 1464 405 aa, chain - ## HITS:1 COG:CAC2391 KEGG:ns NR:ns ## COG: CAC2391 COG1364 # Protein_GI_number: 15895657 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Clostridium acetobutylicum # 15 405 18 408 408 355 49.0 7e-98 MVTWMENGICAPVGFQAAGIHCGIRRNRSKKDLALIYSSVMCTAASTYTLNKVKGAPIAV TKRHLQDGHAQAIICNSGNANTCNANGEEIANRMCELCAQELNLNAEDIIVASTGVIGEP LSITPFEEHMQELVSALDVKGGSDACEGIMTTDTFKKQFAVTFTLQGRVCHIGGMAKGSG MIHPNMATMLAFLTTDVAISAELLDAVVHEVVADTFNMVSVDGDTSTNDMLSILANGLAK NPEICERNEDYEAFKQALMEICVEISRNIAKDGEGATKLLTCRVASAKDTKTAKAIAKSV VTSSLFKAAMFGRDANWGRILCAIGYAEGDFDIHKVDVTLASKAGRMLVCKDGAGCGFDE EEALCILSESEIDILIDMKQGSAQATAWGCDLTYDYVKINGDYRT >gi|312957266|gb|AENW01000005.1| GENE 18 17532 - 18572 1125 346 aa, chain - ## HITS:1 COG:TM1782 KEGG:ns NR:ns ## COG: TM1782 COG0002 # Protein_GI_number: 15644526 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Thermotoga maritima # 3 343 1 336 339 327 49.0 2e-89 MKLIKAGVIGASGYAGAELVRLLLMHPYAELTAISSQSYTGKPISELYPGFYQLCDMVFS DEDTVIAASDIVFASLPHGLSEPLARKCYDAHVKFIDLGADFRLRDEQDYREWYKLDYHD SELHELAVYGLPELYRAQIKGADIIGNPGCYPTSIALALAPLMKLGLVNEQHIIIDAKSG TTGAGKGLSDNTHFPRCNEAFAPYKVAAHRHTPEIEQTLSELCHSKASITFTPHLLPINR GIISTIYVDLTDEAILEELWTMYRLFYQDEPFVRVLPLGSCADLKYIKYSNFCDVSLHME ARNNRLILVSAIDNMVKGAAGQAIQNMNILFDCKEDSGLMYVPASF >gi|312957266|gb|AENW01000005.1| GENE 19 18559 - 19953 1600 464 aa, chain - ## HITS:1 COG:BS_argH KEGG:ns NR:ns ## COG: BS_argH COG0165 # Protein_GI_number: 16079996 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus subtilis # 3 453 4 454 461 466 52.0 1e-131 MNLWDARFKKEADQRLNDFNSSISIDHLMVTQDIKGSMAHAAMLAKQGIISKADGAAIAQ GLEAIQRDIESGALLIDPSAEDIHMFMEQELTKRIGDAGKRLHTARSRNDQVALDTRMYC SDEVRTVCDKLQELLTVLCEKAQEHTETIMPGYTHLQRAQPITFAHHLMAYAEMFLRDLQ RLQEAQKRIRTLPLGSGALAATTYPIDREFVKEQLHFDSISMNSLDGVSDRDFCIEIASD LSMVMMHLSRFAEEVILWCSWEFKFMELDDAFATGSSIMPQKKNPDVAELIRGKTGRVYG DLQTLLTMMKGLPLAYNKDMQEDKEAVFDALHTVQLCLTTFTPMLKSAAIRKDNMRNAAA RGFINATDCADYLTKKGMAFRDAYRVLGRLVSYAQEQEKTLETLTLDEYKSFSDEFEEDI YEAISLETCVKQRKVIGGPAPEIVAAHIEHVKAIQKEMDADEID >gi|312957266|gb|AENW01000005.1| GENE 20 20043 - 21266 1568 407 aa, chain - ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 7 406 3 400 400 465 56.0 1e-131 METKDIKKVILAYSGGLDTSIIIPWLKENYNNCEVVAVSADVGQGTELDGLEEKAIKTGA SKLYILDLKDEFVEDYIYPCLKANAIYEDVYLLGTAFARPLIGQKLVEIAKQEGADAICH GCTGKGNDQVRFELAIKAFAPDMPIIAPWRTWELKSRDDEIDYAEAHNIPLKISRETNYS KDKNLWHLSHEGLDLEDPMNEPQYDDILEMGVTPEQAPDTPTYITLTFEKGIPTALNGEK LGGQAMVTKLNEIGGANGIGIIDMVENRLVGMKSRGVYETPGGTILYKAHQWLESICLDK ETMHYKQGVGIKFGEILYNGQWFTPLREALSAFVDKTSETVSGEVKIKLYKGNLTPASIS SPYTLYSEQIASFGEDDSYDQNDSAGFINLYGLPIKVKAIMDEKRKK >gi|312957266|gb|AENW01000005.1| GENE 21 21819 - 22997 1388 392 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1198 NR:ns ## KEGG: Lebu_1198 # Name: not_defined # Def: protein of unknown function DUF201 # Organism: L.buccalis # Pathway: not_defined # 1 392 1 397 401 356 46.0 1e-96 MNFIFISPHFPESYWLFCQGLKNNGVNVLAIADTPYNSLSTNLKNSINDFYQVSSLENYD EMLRAVAWFTYKHGKIDWIESNNEYWLRQDAALRRDFHVETGFPCEALDNCQSKHRMKEF FAAAGLKTARWQLTTNLEDAQKFTELVGYPIVIKPDIGVGASDTHKIKNGDELRTAFAHG FKEAMIMEEYINGSCFSFDGITNSKKELLFVTSHQYTDSIMDAVNEQKNIGCYSYKDIPA DIMEAGTRSVEAFDTRSRFFHFEFFRLLEDQPVGKKGDIIGLEVNMRPPGGFLPDMINYA NDSNVYQLWADMIVHDTIHYQQVRKYSSGFIGRRDRLHYAHTTQDIQDTYRDSILMIRRL PAALATAMGDEVIVARFKTEEEILDFFRYVQE >gi|312957266|gb|AENW01000005.1| GENE 22 23150 - 23407 462 85 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0924 NR:ns ## KEGG: HMPREF0868_0924 # Name: not_defined # Def: glutaredoxin-like protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 85 1 85 85 85 49.0 7e-16 MKHVRMMYLKGCPHCKAAFAMVKELQDSYPELRGVNIEAIEEQEQKELADSLDYWYVPTY FVDGVKLLEGVPTKEKVEAVLRAAL >gi|312957266|gb|AENW01000005.1| GENE 23 23467 - 24129 569 220 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401558|ref|ZP_06645701.1| ## NR: gi|293401558|ref|ZP_06645701.1| putative membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 7 220 2 218 220 141 47.0 4e-32 MIKIACLLFLFVVVYYIFKEHSSAFTSLFWKSASSFCFLLVGFCAFAACVDRRYGEWMLI GLVSGAIGDVLLALPFCYPKRKNLFFLGGLLFFLFGHLAYVAALFVMPVKAGILVAICSI LLALLVIEVLKKKQVDFQEMRLPSTVYAAVILFMEACALWHLQDGMLYGGILNIASLCFV LSDLILAFMLFGNRNTTRMTRWNLSLYYTAQLLLALTMLL >gi|312957266|gb|AENW01000005.1| GENE 24 24220 - 24978 747 252 aa, chain + ## HITS:1 COG:SP0882 KEGG:ns NR:ns ## COG: SP0882 COG2819 # Protein_GI_number: 15900765 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Streptococcus pneumoniae TIGR4 # 2 195 10 206 274 84 31.0 2e-16 MIEKRDIYIPCFQDMRMLHIYLPEDYEKETRHYPVLYMFDGHNLFYDEDATFGRSWGLKR WLDEHTMPLIVVGVECNHEGNRRLEEFSPYDFSDATVGFIHGQGKELMEWMSSDLKRWID HAYRTLPGKHHTAIGGSSMGGLMALYAVVHHCDIYSKAAVLSPFIYRLKDELLTEIRACP KLRSHKIYISWGSDEFRTKQQLALASGRILELMRCLEEKEAKVYPNLVFKGRHNEESWEQ ELDTVLTWLFTE >gi|312957266|gb|AENW01000005.1| GENE 25 25013 - 25192 291 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGRKKIVMTKAVRERLQKDIAYGNDMQAYWNRYRRDFLILLAVLLLIMLVLVIANILL >gi|312957266|gb|AENW01000005.1| GENE 26 25293 - 25775 447 160 aa, chain - ## HITS:1 COG:YPO2508 KEGG:ns NR:ns ## COG: YPO2508 COG0454 # Protein_GI_number: 16122729 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Yersinia pestis # 9 150 10 152 165 97 37.0 9e-21 MLRDYQVNDLSQMCRIWNAVVAQGNAFPQLEQLDEQSGDVFFSSQSKTRVCIDEDTVVGL YILHPNNVGRCGHICNASFAVNQKQRGKHIGKALVLDCMKTARSLGFRILQFNAVVESNA SARHLYESLGFHSLGTIPGGFLQSDGAYVNIVPYYISLTE >gi|312957266|gb|AENW01000005.1| GENE 27 25779 - 26360 848 193 aa, chain - ## HITS:1 COG:FN1880 KEGG:ns NR:ns ## COG: FN1880 COG0778 # Protein_GI_number: 19705185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 10 190 10 189 192 87 31.0 2e-17 MLKDLLLKNRSYRGYDETRAVTREELVDLVEHARLTPSSVNKQALKYYLACEREKTNQIQ PLTAWAKALKKEVPYEGHCPRAFIVICQDTAISTALEAYQKDVGIVAQTMLLRAAELGLG GCMIGSFQKNALHEVLKLSENLVPLLVVAIGKPDETIVLEDVNVQGDTTYYRDAQDVHHV PKRTTRELIINGE >gi|312957266|gb|AENW01000005.1| GENE 28 26405 - 27625 1288 406 aa, chain - ## HITS:1 COG:TM0342 KEGG:ns NR:ns ## COG: TM0342 COG0477 # Protein_GI_number: 15643110 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermotoga maritima # 6 353 7 364 413 85 24.0 1e-16 MKKTLWSHDFIIITLGTLISAIGSTAMSFALSLVVFDHTSSTLMTGIFTAISLMPTVLIP ILAAPLVDGCCRKRLIVMLDSGNGILYLLFAAFLLMQEFSYAGYLIFSLLTASFGAIYSL AYSSLYPDLIPKGFAQRGYSVSSLIYPSVTALFTPVASLLYVHLGIAWICAMEGILLLTA ALFEARIRYQETIGKRVFTLQKYKGDLMDGFRYLKKEKGIRSIYGYMAVTNASAEGINLV TMAMFQSSPILTTTMYAFLTTADTIGRMAGGLMHYVLHIPAKKRYRVAVSVYAVYESLDM VFLFLPYPLMVVNRFTCGFLGINSLNIREASTQNYLPSHMRARVNALFQVLVALIMMASR FSAGVIAQYVSYPLTALLFASFSMLAIFLLIIRNRKQVSKIYNQEL >gi|312957266|gb|AENW01000005.1| GENE 29 27737 - 28921 1091 394 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1590 NR:ns ## KEGG: Cphy_1590 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.phytofermentans # Pathway: not_defined # 5 313 16 307 456 108 28.0 4e-22 MDLRGFLVRCHRLQRNYSQEGLCRGICAVSYLSKLEQGKVQAADEIYQALFHRLGIVFQE NEKWLAVWKEKLQELASAWFYGEQREAYELEKQMENLLNSPLCVDALLIKALYTKEHADK PLASASVFLPYMQDAQRFLYHFLCAGQALQSREEQTLSAILAQLQEAQKYGGWSILYQMK GDVYALMGDYSQALHHHLKAYDLACEEGFLPCMIDASMHIANCYSAMHAEGVMLMYYERC EHLCRSSKNKQMQAHVWYNIGSTYQQWGDFQKALPLLLKAYQILDDTFLCCHKLALLYEQ LNQKKEGLRYVQEMERQLDSHGADGRREIVQFVRYRYGTAVDAEAYIDCLYTLCDTSRYF HGFCQFHLSYLIAALKKKRRYKEVMKLMEETKFS >gi|312957266|gb|AENW01000005.1| GENE 30 29374 - 30468 867 364 aa, chain + ## HITS:1 COG:lin0658 KEGG:ns NR:ns ## COG: lin0658 COG0639 # Protein_GI_number: 16799733 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Listeria innocua # 18 244 4 224 235 61 24.0 2e-09 MFDRSIHSYSVLSDSRRIIAISDIHGNLPVFKKLLRKIAFDPEKDALFLVGDLLEKGPYN LETLYYIMELSRHPHVHPMIGNCDVVCRNVLYDTRLEFLQNILLNRPNSILHEMAQRVGQ RIDKETDMAALSRELRKVFLRELTFIDRLPHVIETERFIFTHAGIRDEKTYGRDMRDIMV QDLFMKEAGSFHKYIVVGHLPVSEYRKDICCFNPIIDTRRHIISIDGGNEVKSAGQLNAL IYEQGRFQFACSDHLKKARITRDILPVNRTPFFITWHEGQVHMLRDEGACCLCRHEASGK VMHIAKEFLFYKGKELHACDFTNYQIPARCGNLVKIVSQTRNAVLVKKQGLMGWIPADAL ALES >gi|312957266|gb|AENW01000005.1| GENE 31 30840 - 31901 1042 353 aa, chain - ## HITS:1 COG:CAC3420 KEGG:ns NR:ns ## COG: CAC3420 COG2008 # Protein_GI_number: 15896661 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Clostridium acetobutylicum # 1 335 1 339 344 383 54.0 1e-106 MYSFRNDYSEGAHPVIMERLLELNQCQNVGYGEDALCEQAKRQLKAKLHCEDCDIHFLVG GTQANLTVIAGALRPYEAVIAVDSGHINVHETGAVEATGHKVLIAEGVDGKITPQGIRKA VLSHEDEHMVKPAMVYISNATEIGTIYHKEELKQIAEVCREFGLYLFMDGARMGAALAAK DNDVSFNDLCTYCDVFYLGGTKNGALFGEAVIIVNDKLKKDFRYMIKQRGGMLAKGWLLG VQFAALFEGNRYIEIAAHANRMAQKLQDAMEASGLPFLIKTTTNQIFPVLPNLLIEELQK EYAFQVWETMDEEHTAMRFVTSWATEEKEVDQFVEYLNSLLQRMRESGQESER >gi|312957266|gb|AENW01000005.1| GENE 32 32319 - 33866 1903 515 aa, chain - ## HITS:1 COG:BH3898 KEGG:ns NR:ns ## COG: BH3898 COG4670 # Protein_GI_number: 15616460 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Bacillus halodurans # 2 513 3 514 525 631 61.0 0 MSKVISIEQAVSMIPDGAAIGIGGFIGSGHPQEFSVGIEESFLKSGHPKDLTIMFSAGIG DGTDRLGLNKLGHEGLLKRIIGGHWGLIPKLQKLVFENKVEGYNLPLGTISLMFRDIAGH RPGTITKVGLKTFVDPRIEGAKMNERSKEDLVELMHIDGEEWLRYKSFPLNVALIRATYC DEDGNATMEKEAATLDSLSIAQAAKNSGGIVLLQVEKVVQNGTLDPRKVKIPGIYVDGIV VARPENHWQTYANPYDPALSGEVKVPVNSIAPMKLNERKVICRRAAMELDPAAIINLGIG MPEGIANVANEEGLPGLKLTVEAGGIGGVPNAGTAFGTCTNPDAIIDQPYQFDFYDGGGL DQAFLGLAECDCSGNINVSRFGPKIAGCGGFINITQTSPVVVYCGTFTAGGLKVEVKDGK LHILQEGRIKKFKQEVEQITFSADFATETGQKVLYVTERAVFELLDGKLTLTEIAPGVDL EKDVLGQMEFKPAVADNLKTMDERLFREELIGLKA >gi|312957266|gb|AENW01000005.1| GENE 33 33956 - 34735 1072 259 aa, chain - ## HITS:1 COG:CAC2712 KEGG:ns NR:ns ## COG: CAC2712 COG1024 # Protein_GI_number: 15895969 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Clostridium acetobutylicum # 1 259 3 261 261 296 59.0 2e-80 METILVNYEGHVATITINRPKALNALSTQVLTELNQALDEVAANNDVYALVLTGAGEKSF VAGADIAEMKDKSVEEAAAYGKFGNEVFRKIETFRCPVIAAVNGFALGGGCELAMSCDIR VASENAVFGQPEVGLGITPGFGGTQRLARLVGTGIAKEMIYTARNIKAERAYAIGLVNNV VPAEELMAVVMKMANGIAKNAPIAVAYSKKAINNGLQTDIDGGIAIEVEEFSNCFATEDQ TYGMTCFLEKTKDKKFSNK >gi|312957266|gb|AENW01000005.1| GENE 34 34836 - 35675 1028 279 aa, chain - ## HITS:1 COG:FN1019 KEGG:ns NR:ns ## COG: FN1019 COG1250 # Protein_GI_number: 19704354 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Fusobacterium nucleatum # 3 279 2 279 279 323 61.0 3e-88 MKKVGVIGAGTMGQGIANAFASNGYDVTVCDIKIEWAQGGIDKIAKKLDKLVSREKMTAD KAAEVKGNLKAGEYKDLADCDLIVEAVLEKMEVKKELFTTLDEICKDSCIFGSNTSSLSI TEIATGIKHNVIGMHFFNPADRMKLVEVISGINTPVETKEAILEISKSLGKTPVEVAEGP GFVVNRILVPMINEAAFILQEGIASVEDIDIAMKLGANHPMGPLALGDLIGLDIVEAIMD VLYNETKDSKYRCCTLIRKMVRGGKLGQKSGIGFYDYSK >gi|312957266|gb|AENW01000005.1| GENE 35 35748 - 36776 1276 342 aa, chain - ## HITS:1 COG:FN0785 KEGG:ns NR:ns ## COG: FN0785 COG2025 # Protein_GI_number: 19704120 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Fusobacterium nucleatum # 7 336 6 384 391 275 45.0 7e-74 MAKFEGYKDIYVFVEQKNGEVANVGYELISEARKLVASIPQMNFQVVGVLLGHNIKDKAN DVIAHGADKVIVVDDALLEGYSTQFYADALTQVINSFKPDSFLTGATVLGRDLAPRVAAR LNAGLTADATKIEIDQEKAKDGEALLLVTRPTFGGNLFGTIVCPDTRPQMATIRPNVFSM DAVDASRTGEVVEFTPEWTDTDPKVIVKEVIAKVVEGVDITKADILVGAGRGAEDCLDMV QAVAEELGGELCASRAVVDDGFADKAIQVGQTGKTVRPSLYIACGISGACQHVAGMEKSD MIIAINRDPQAEIFSIANMGFIGDVKEILPLLKDEIIAAKKG >gi|312957266|gb|AENW01000005.1| GENE 36 36791 - 37579 768 262 aa, chain - ## HITS:1 COG:CAC2710 KEGG:ns NR:ns ## COG: CAC2710 COG2086 # Protein_GI_number: 15895967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 1 260 1 259 259 263 54.0 2e-70 MKIIVLVKQVPDSTEIRVDKVTGTLIRAGVPSIINPDDLAGVEAALQLKEKYGATVTIIS MGPPQATGMLKELYARGVDECILITDRKFAGADTCATSSTLAAALNKTGYDLIIAGRQAI DGDTAQVGPQTAERLGIPQVTYVDDIIELSDTAVTVRKSLEDSEEIIEAKLPCVLTTLSG MNEPRYMNCNDIVDSFSKEVNVMTFDDLGIDESIVGLAGSPTKVHATFTKEVSAETETFD LPAAEAAKLIAKTLKDKQIITK >gi|312957266|gb|AENW01000005.1| GENE 37 37610 - 38749 1065 379 aa, chain - ## HITS:1 COG:FN0783 KEGG:ns NR:ns ## COG: FN0783 COG1960 # Protein_GI_number: 19704118 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 379 1 381 381 512 68.0 1e-145 MDFMLTEQQQMMKKLFAEFAEKEVKPLAAEVDEDERFPRENVEKMKACKMMGIPFSREYG GAGADYLSYILAVEELSKKCGTTGVVLSAHTSLGTWPIEHFGTEEQKNKYLPDLCTGKKL AAFGLTEPNAGTDAAGQQTTAVKDGDDYILNGTKIFITNAGEADVYVIFAMTDKTKGTHG ISAFIVEKGMPGFTVGQHEKKLGIRGSATSELIFNNVRLSKDHLLGQEGKGFKIAMMTLD GGRIGIAAQALGIAQGAIDETVPYVKARKQFGRSIAKFQNTQFQLADMQVKTDAARWLVY DAAMKKEKGLPYSVEAAKAKLFAAEVAMEVTTKAIQLMGGYGYTRDYPVERMFRDAKITE IYEGTSEVQRMVISGAMLK >gi|312957266|gb|AENW01000005.1| GENE 38 39092 - 40300 1500 402 aa, chain + ## HITS:1 COG:FN0495 KEGG:ns NR:ns ## COG: FN0495 COG0183 # Protein_GI_number: 19703830 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Fusobacterium nucleatum # 1 402 1 401 402 475 61.0 1e-134 MRKAYVVAAKRSAIGSFMGGLTNMPLVDLGAAVLSRTIEEAGIDPANIDEVIVGNVIAAG LGQNIGRQVSIKAGVPVEVCAQSLNMLCGSGLKAVMEATMRIQCGFGDIFVAGGVESMTN APYLVPSKVRNGVKMGDMKMVDSMLHDGLTDGMYGIHMGVTADNIAKKYSISREDQDAFA YASQQKAIAAIDSGRFQDEIVPVEVPGRKGSVTVFDTDEHPNRASTPEKLAKLRPAFTKD GTVTAGNASGINDGASFTIIASEDAVKKHNLTPLAEVIGIGQGGVDPRVMGLGPTPAILH ALKYADLCIEDMELVELNEAFAAQSLGVIHELEEATGMDRNAFMEKTNVNGGAIALGHPV GASGNRILVSLLHEMQKRDLKIGLASLCIGGGQGAAVIIKRV >gi|312957266|gb|AENW01000005.1| GENE 39 40497 - 41702 1353 401 aa, chain + ## HITS:1 COG:FN0495 KEGG:ns NR:ns ## COG: FN0495 COG0183 # Protein_GI_number: 19703830 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Fusobacterium nucleatum # 1 399 1 399 402 503 65.0 1e-142 MRKTYVVSAKRSAIGSFLGSLTTVKPVDLGATVVKALLEDGKVAPEQVDELLCGNVLSAG LGQNIGRQVALAAGIPESVCSHSVNMVCGSGLRTVMEGVMSIQTGFNDIVVAGGVESMSG APYLIPANTRTGNKMGDFKCVDHMIYDALTDAMNGIHMGVTAENIAKKYNITREMQDAFG YASQQKAIAAVDSGRFKDEIVPVEVKLRKETIVFDTDEHPNRKSTPEKMAKLRPAFVKDG SVTAANASGINDGASFVLLASEEAVEKYNLTPLCEVVGIGQGGVDPLTMGLGPTPAIRNA LKYADMKLDEVELVELNEAFAAQSLGVVHELVEEHGIDREAFLEKTNVNGGAIALGHPVG ASGNRILVTLIHEMIKRDAKSGLASLCIGGGQGTAVIVKRP >gi|312957266|gb|AENW01000005.1| GENE 40 41823 - 43937 2169 704 aa, chain - ## HITS:1 COG:MJ0566 KEGG:ns NR:ns ## COG: MJ0566 COG0370 # Protein_GI_number: 15668746 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Methanococcus jannaschii # 22 702 2 668 668 308 30.0 2e-83 MLFEKLVQANDNINEMYLKQRKGYTIALLGNPNVGKSTVFNELTGMNQHTGNWPGKTVEL AKGHYTHRYRQNQMIDLPGTYSLLAHSSEEEVTRNYVCFEPCDVCLVICDATVLERNLNL VLQTMEITDHVVLVLNLMDEAKKKNITIDTEKLAKLLKVRVVEMSARNHEGFEDVKEAIE EVGNRVSDTQGAAVRYAKDLEQAIAAVADVMKTRRLNTRFTALKLLDPEVDSTLFYEDIE NQEETRAEVEKQIARLKDKDLYERFEDIVVHALHERAREISEECIIFNNASYQNRDMRID HVVTSKGWGLVWMVVLLSVIFWITISGANVPSEMLSGMFEDLQVWLHQLFASWSMNPYIT SFIVDGVVKTCGWVISVMLPPMAIFFPMFTLLEDFGYLPRIAFNLDGFFQKACTCGKQAL TMCMGFGCNAVGVSGARIIDSPRERLIAIITNTFVPCNGRFPTLISIITMFFAGVVAAPW NGLLSTLLLTGVIVFGVILTFLTSRFLSKTLLKGVPSSFTLELPPYRRPQFGKVIVRSIF DRTLFVLGRAVSVAIPAGAIIWLLANIQVQDASLLQHISLFLDPFAHLMGLDGVILLAFL LGFPANEIVVPIMIMAYLANGSMTDIGDLAVLKELFVNNGWTWVTAICTLMFSLVHFPCA TTLLTIHKETQSWKWTAVSFLLPTVLGILLCMGINLLAHIFLLV >gi|312957266|gb|AENW01000005.1| GENE 41 43927 - 44172 320 81 aa, chain - ## HITS:1 COG:no KEGG:DSY2611 NR:ns ## KEGG: DSY2611 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 11 72 16 77 82 61 48.0 8e-09 MNCLKDAVLNEEVFVVDIEHTALMKRRLMDLGFVPGTGVTPVLESPSRDMRAYLIKGCKI ALRSEDSERILIKGKEAAYAV >gi|312957266|gb|AENW01000005.1| GENE 42 44535 - 45671 1014 378 aa, chain - ## HITS:1 COG:TM1183 KEGG:ns NR:ns ## COG: TM1183 COG1453 # Protein_GI_number: 15643939 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Thermotoga maritima # 1 374 1 379 379 315 42.0 1e-85 MEYRELNEEYQPSLLGFGCMRFPLDAQGKIDEAEAERMLDTAIAHGVKYIDTAFPYHHGD SEPFVGRVLKKYDRSSYYLTTKLPLWDLNTLEDAKAMFENQLKRLDVTYVDFYLLHALDK AKWEKAKQLDILAYCEELKAQGKIRNFGFSFHDEYDVFEEILTYRKWDFCQIQYNYVDTQ EQAGDRGYALAEKLGIPMVIMEPVKGGSLSKLPQDLASRLKEAAPNSSISSWALRWVASK PNVKVVLSGMSTMEQVLDNLSTFEDFKPLSVAEQGLIKEIAEEIKARTMNGCTGCAYCMP CPFGLDIPKNFRIWNEHAKYGNTEVARKRYFEEMKEEERSSQCKKCGKCEALCPQHIAIR EDLAHMSSDMELLKSKAG >gi|312957266|gb|AENW01000005.1| GENE 43 46201 - 47154 1006 317 aa, chain - ## HITS:1 COG:CAC1825 KEGG:ns NR:ns ## COG: CAC1825 COG1897 # Protein_GI_number: 15895101 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Clostridium acetobutylicum # 1 300 1 301 301 343 54.0 3e-94 MPINIPNGLPAKQILESEKIFALEEDVARKQDIRPLRIVILNLMPKKIETETQILRLISK SPLQVDIDFMMVSNHVSKNTSADHLLKFYDDFSTLKKNRYDCLIITGAPVEHLEFEDVDY WDELCEIMEWSKTHVYSTLHICWGAQAGLYYHYHIQKHLMKQKVFGIYPQTLCDEYNFLT NGFDEIHYTPHSRHTAIDEHALAKQEALEILSRSDVTGSNIVATGDFREIYILGHLEYGK ETLAQEYFRDLSQGKEIQLPFNYFPEDDPQQEPVLTWRSHANLLYRNWLNYVYQMTPYDL QELSAYKQEHNVAAASV >gi|312957266|gb|AENW01000005.1| GENE 44 47168 - 48433 1522 421 aa, chain - ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 1 418 1 418 422 572 63.0 1e-163 MKIESKCLHAGYEPKNGEPRVLPIYQSTTYKYDSTDFVGQLFDLTAEGHMYSRISNPTVD AVEKKIAALEGGVGALCTTSGQSATFLALMNVLESGDHLVASSTIYGGSVNLLSITFRKF GIEVSYVDPDAAAEEIEKLIRPNTKAVFGEIMANPAMNVLDIEKFASVAHAHDIPLFVDN TFATPVLCQPFRFGADIVIHSTTKYMDGHALQIGGVIVDGGTFNWANGKFPGLSTPDASY HGIVYTDTFKEAAYITKARVQLMRDLGCYPAAHSAFLLNLGLETLAVRMERHCANAQRTA EFLESQDAVEFVNYPGLKQNKYHALAQKYLPKGCCGVISFSIKGGRERAAAFIDHLKMVS LEVHVADIRTCILHPASSTHRQLTDEQLVNCGITPGLIRLSCGIEHIDDILEDLTQAFAQ I >gi|312957266|gb|AENW01000005.1| GENE 45 48518 - 49468 900 316 aa, chain - ## HITS:1 COG:CAC1480 KEGG:ns NR:ns ## COG: CAC1480 COG0673 # Protein_GI_number: 15894759 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 2 314 4 317 320 178 34.0 1e-44 MIRVGIMGLGQIAHRVAKGICYAENAELYAVGSRSLEKAGEFQRLYGAQKIYDSYERLLQ DPQVEMVYICTPNHLHFEHIQNALRHGKHVLCEKPLVANAEQLKECFELARSSNLFLMEA EKTLFTPLNRKLKQLVKEGVIGQLRYVEGSYSYPIDLSEMEEDHWCFSKEAGGSVYDVGV YPICYANWFSDGCISDIQAVKDCAAGGYDMFTQALLTYDNGVIASVRSGWKQWMDNRGVL YGSKGSIETENFWKNTRAILKRDGICTPIEVDMKSDFTGEVEHAAACIQQGLLESPILGE RQSMEIMKVLEYVKSL >gi|312957266|gb|AENW01000005.1| GENE 46 49579 - 50256 843 225 aa, chain + ## HITS:1 COG:MA4652 KEGG:ns NR:ns ## COG: MA4652 COG2013 # Protein_GI_number: 20093431 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 218 5 231 263 185 46.0 5e-47 MKYEIIGGQLPAVVCKLDRGEKMFTESGGMCWMEEGFSMDSNTRGGLLKGLGRAMSGESI FLTTYTSSHDHAEIAFGSSFPGKILPVTLHDGKTLIVQKNAFLAAEDGVNLQAHFRKKLG TGFFGGEGFVLQKLTGNGTAFLEIDGDIIEKTLAPGETLQVDQGYIAGFEESVHFDITTV KGLKNKFFSGEGMFLATLSGPGKIWLQTMPFSVLADRVISLVPKN >gi|312957266|gb|AENW01000005.1| GENE 47 51080 - 51589 -126 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|266625481|ref|ZP_06118416.1| ## NR: gi|266625481|ref|ZP_06118416.1| putative PAS domain S-box protein [Clostridium hathewayi DSM 13479] # 43 113 166 236 478 73 49.0 4e-12 MSCSSINYRLPKHCNRYSKREAAEGSAAYEYGGKPHGVLAQISEDFDLSQIMYEVPMSIV KAGTVERGSIPEFIRFYNAMLSGEPHGYFEVKKRKKDGTCCWYSAKYSMIYDKRIRFVFF IRHILIRKSENQACSMTPADYLSPFSNVLYGISFVLLTLSKGRTYRLEG >gi|312957266|gb|AENW01000005.1| GENE 48 51851 - 53557 1676 568 aa, chain - ## HITS:1 COG:lin0483 KEGG:ns NR:ns ## COG: lin0483 COG4716 # Protein_GI_number: 16799558 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Listeria innocua # 1 568 1 566 566 809 67.0 0 MKRQTKKLAAGAAAAAGIAAATAVRHVTKKREQSAQSMVSSGREGERQAYLIGGGLASLS AAAYLIQDGGFHGENIHIMEGMSILGGSNDGAGTMQNGFVCRGGRMLNEETYENFWDLFS SIPSLDWPGKSVTEEILNFDHLHPTHAQARLVDRYGVIQDVRSMQFNNTDRFLLTKLLAT PEEKLDDVTIEQWFKDSPHFFTTNFWYMWQTTFAFQKWSSAFEFRRYMNRMILEFPRIET LEGVTRTPYNQYESVILPLKAYLEGFGVDFSIRAVVEDLDFKEDSVTVTDIHLLENGKQR TIHLEDSDLCIMTNGCMTDCTTLGDFKTPAPYEPKDPISAQLWKRVAEKKPVLGDPTPFF GKPEETNWESFTVTMKGNRMLKMIEQFSGNIPGSGALMTFKDSSWLMSIVVAAQPHFKAQ DANTTIFWGYGLYTDALGDYVKKPMRECSGEEILMELIHHLHFEENTKDIMESVVNVIPC MMPYIDSQFQPRAMSDRPLVIPSGSTNFAMISQFVEIPEDMVFTEEYSVRAARMAVYGLL SIEKKLCPVTPYHKNPKVLAVAAKTMLR >gi|312957266|gb|AENW01000005.1| GENE 49 53709 - 54773 1147 354 aa, chain - ## HITS:1 COG:DR1963 KEGG:ns NR:ns ## COG: DR1963 COG2805 # Protein_GI_number: 15806961 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Deinococcus radiodurans # 2 353 7 356 420 303 45.0 3e-82 MVTIEQMLKEAIARDASDIFLVAGHPYAFKINGEIHSMQETRLMPNDTAQLIQEIYQYAL QNTYEDFLKKKDDDFSFSIPDVGRFRCNVYLQRNSQAAVLRVVRFELPDPVELNIPQVIT SLAAVKKGMILVSGPAGCGKSTTLACIIDKINESRNVHIITIEDPIEYLHAHKKSIVSQR EVYHDTQDYLNALRSALREAPEVILVGEMRDLETINTAVTAAETGHLILSTLHTMGAANT IDRMIDVFPSEQQQQIRVQLSMTLHAVISEQLVPATDGGIIPVFEIMIVNPAIRTQIREG KIHQLENSMIAGRDQGMITMDESLMKLYEEGRIDKEAALMYASNSERMRKKLNM >gi|312957266|gb|AENW01000005.1| GENE 50 54773 - 55195 462 140 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLEKRGVQIGLGASSIFMIFVVLCMMILSVLSYTRSLQNEKIAQREKLYQEAVAKSDAG AQLLIDELRQYPKQTLQQSLKQSRVQSLLQEYAMKTDWEQDELLVTIPVQDAQQLQLRLQ KQGSAVHIKAWKTITKGDAL >gi|312957266|gb|AENW01000005.1| GENE 51 55192 - 55593 375 133 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRESHANKSISFLMELIFVLFFFTLASAVCVLVLGTAKDKNNLAADTRNALQYGENLVAQ RKIPQVQQAMQKKIFYLDENGNRSSSQAGYYRVEIEQKKAVEKSGRALCELCIYRDDKEL VRLPFLLEGGVQK >gi|312957266|gb|AENW01000005.1| GENE 52 55606 - 56067 488 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167760250|ref|ZP_02432377.1| ## NR: gi|167760250|ref|ZP_02432377.1| hypothetical protein CLOSCI_02623 [Clostridium scindens ATCC 35704] # 2 152 6 159 161 82 31.0 1e-14 MKQRHSIDILFSLSLFTVFVICAFLVLLFQTGSYQAIIKQGEEVERMHTPLAYLRAKIRS ADEDGAVSVRQLEDTDAIVIHDKKERIVTYIYEYEGKLRELYASEEVKPMLSAGTSLFTV YDFEAQENGGLLQVSIHDEQGKASRMMMELKSE >gi|312957266|gb|AENW01000005.1| GENE 53 56064 - 56357 359 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295099369|emb|CBK88458.1| ## NR: gi|295099369|emb|CBK88458.1| hypothetical protein [Eubacterium cylindroides T2-87] # 6 95 11 100 102 86 46.0 4e-16 MLGLQLFMFMGILVMLYYGFSTADSGLSREDAQRAKEAIQKAALECYSIEGAYPQSLEYL KQHYGLYIQEDAYRIRYHYIGANIMPDTDVYPRSEQP >gi|312957266|gb|AENW01000005.1| GENE 54 56375 - 57406 1090 343 aa, chain - ## HITS:1 COG:all2442 KEGG:ns NR:ns ## COG: all2442 COG1459 # Protein_GI_number: 17229934 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Nostoc sp. PCC 7120 # 14 343 72 407 407 137 25.0 4e-32 MTHTTLRSEEMFDFCTQMSMILAGGLSVEEGLEIIGDDTDNPHMKEAAACLLEKVHVIGS FSAALEEAPYFDTYAKKMVEIGEISGHLDNVMKELALYYERSSDLKQSLKEALTYPSILL LMMWAVVGIIVWKVLPIFEKVLLHMGAALQGTAASMMRFGQLFATASFIILTLFLLGGIL LAVTFRKSGGKSFLSHLFMTKRLYHNMVMAKMTYALSLFITSGYEMEEALGYLTDVVGDE AVQKKIDACRSDMQEGKSFSQCLREQALYQGVYASMIITGFHSGKSDEVMQKVSTLYEKD VDTSISTFLNTIEPVIVIVLSVIVGIILLSVMLPLMSIMSSIG >gi|312957266|gb|AENW01000005.1| GENE 55 57419 - 58336 863 305 aa, chain - ## HITS:1 COG:CAC2409 KEGG:ns NR:ns ## COG: CAC2409 COG1305 # Protein_GI_number: 15895675 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Clostridium acetobutylicum # 172 273 261 369 397 63 38.0 5e-10 MSMKFRRFLCFLTALLLISGCAGKEDGKKYPSEYEPSPSPKMSELRLPSSPGEQVAVDSS GLVQIDYSNTSSGYLQAKLLHKPEKRMRLQITKDGVGNIAYDFTKENEYETFPFEQGSGT YLVKVLENRSGKTYTITLTLSVDVKLENERIPFLYPNQTVNYDSHTAAVKKAFDLTKDDD TVLKRIATLYNYVVDNISYDSKKAKEVEDIYVLPVVDETLESKKGICFDYAALLAAMLRS QQIPTRLVTGNTTIEYHAWVEVYIEGKGWINPDILLHAKKWSRMDPTFDASDIDYKDDYE DKYYY >gi|312957266|gb|AENW01000005.1| GENE 56 58805 - 59485 629 226 aa, chain + ## HITS:1 COG:alr1540 KEGG:ns NR:ns ## COG: alr1540 COG3409 # Protein_GI_number: 17229032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Nostoc sp. PCC 7120 # 147 210 15 77 128 61 48.0 1e-09 MAKVIVYNVYTQALETFYLEENDPMPYAYDRTMLVREFRGSSRSSVLWTTNAAMEAWNAT RRTYGAPIPFRYAFKRIWEGGHGKQSQHYAGVSFDVGQALTQAERNRIWNTANNLGVWVY VEPIYMTPTWVHFDKRYGTPACSAGFPVLRSGSRGVYVLILQDALNALGYSTQTLDGVFG GNTRNALVAYQRDNGLSADGVVGCGTWTRIVNEVVGIGRTPTVIDP >gi|312957266|gb|AENW01000005.1| GENE 57 59696 - 59863 63 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSRKFHIIWITARNTAMNDSDVNSLVIRGQKLDSAVIFSIAKDVYEQPGKSRCI >gi|312957266|gb|AENW01000005.1| GENE 58 60124 - 60258 92 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVQRQKSYLLNAFLLGVITGFFIAPLKNGIQVHVSSRGTCSPKK >gi|312957266|gb|AENW01000005.1| GENE 59 60323 - 61117 507 264 aa, chain - ## HITS:1 COG:VC0277 KEGG:ns NR:ns ## COG: VC0277 COG0789 # Protein_GI_number: 15640306 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Vibrio cholerae # 1 102 1 101 133 60 31.0 3e-09 MIYKIGDIAKVMGVTTEAIRHYERMGLIKPEKDPQTNYRYFTEEQLSQLLYIQRLSQMGI SLQLIREQFLNGSLHSYEQVISETLQSTQERLRILQMKTSNLMNCLDILQTAEQSKGRCI YGMRPDMYFISTQHCIQSSFAQEQPKGFHNFSNHADLFFQSVHYYEENGVWRSEKGFGIY KDCAEYAQYCENPYFHLRSAAHAVLCTFDNLKTDAGITETVRTFFREHNLKRSGEVYSRQ VYRTFSKEQEPVVMELLAIPYIRI >gi|312957266|gb|AENW01000005.1| GENE 60 61192 - 62115 847 307 aa, chain - ## HITS:1 COG:CAC0510 KEGG:ns NR:ns ## COG: CAC0510 COG0812 # Protein_GI_number: 15893801 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Clostridium acetobutylicum # 22 301 24 301 305 230 41.0 3e-60 MDIFEKAYQFLQDEGIAARRHIELKQYTTLHIGGEAQILAEPSSITQIQQCLAVCKQHRI EWFLLGNGSNVLAMDEGFQGMVIVLATNFNSIRLEKENRVRAQSGAAIKAVSAFCAAHSL SGLEFACGIPGSVGGAVFMNAGAYGGETKDVLLEVVWLDENGSLHTSCAAQLELSYRHSR FSKHGGIVLEAVYALIPGRQEAILAQMEELMRRRREKQPLDAYSAGSTFKRPQGNYASAL IRDAGLMGTEVHDAQVSTKHAGFLINRGAASSQDFLELIHRVQQEVKEHSGYELECEIRF LRNEHRS >gi|312957266|gb|AENW01000005.1| GENE 61 62220 - 63197 997 325 aa, chain - ## HITS:1 COG:CAC2945 KEGG:ns NR:ns ## COG: CAC2945 COG1052 # Protein_GI_number: 15896198 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 35 324 25 322 324 215 37.0 1e-55 MCCYNKEGNMKHRICMLNIARINYDHRLDISCIKGDVVAYEDSDLQEILQRVQDCEIVVS KELGLSKALIEQFPDSVRLICEAGTGYNNIDLEACRKKGIIVCNTPAYSTKRVAHTAIML LLSLSSSMREQLQMLEHKDYRNFTDHMLVEHTEVNDKTLGVIGYGSIGQEVIRIAKVLDM KILVYTRTPREHVEGVRFVSLPELLKESDYVSLHCPLTSETRHLIDEVHLSMMKPSAAII NTARGALIDEQALIAALQNKRIAKAALDVQEEEPMREDNPLYTMPNVIITPHMGWRGLET RQRLLQLVSANIEAYMEGTVINRVV >gi|312957266|gb|AENW01000005.1| GENE 62 63312 - 64367 746 351 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401542|ref|ZP_06645685.1| ## NR: gi|293401542|ref|ZP_06645685.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 6 348 5 347 347 305 51.0 3e-81 MKKWIKQTIKYILLAMFVAGMLYFNIKDHAAEIFDTLQHLQLRYTLGLILLSASVYVIGG IGICVLCRKVNPAYQMKSGISNAMISLFLMNVSASAVAKAAQMLLFKVRNISWEQGCSIL VMDQILYQISYMALSACAVFISCDFLIPLFPKESILALTGFAISIFPILIVALLFLWPGV FAGLSKGIGYLIDKLQLPFDKLSIQHALQRFADSLQTANGLYKKDYRVMLRVHLLNTVKL SIRHSLPLLIAFFLQIDLRLQDIPLFFSASFFVDLILSALPVYGKHGVAETTFTLIFTPL AGAAQAASIMLVWRAITFYTNTVLGGICMILSPDISRSSLKEIKQNSKMST >gi|312957266|gb|AENW01000005.1| GENE 63 64731 - 66005 1418 424 aa, chain - ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 22 423 3 411 411 320 44.0 4e-87 MKKQDAQYRGYVTLLKKELVPAMGCTEPIAIAYAAAQAAARLKEDIKQVDIYASGNIIKN VKSVTVPNTGGRKGIQSAAAIGIIAGDPTLGLEVISHVRTEQIAQMEAFLEKTAVYVHHE QCSCALQVGVRVSGDKHTVLVCIQNEHSNIVRIEEDGRCVLDKEARKDTQEQLDAMQFSM QGIYEFAEIADLADVKEILDRQIQCNTAIAEEGLAHSYGANIGSVLLSTYGDSVQIRARA LAAAGSDARMSGCELPVIINSGSGNQGMTCSLPVIAYARELQSSEEQLYRALLISNLSTL YQKKYIGRLSAYCGAVSAGAGAGAGIAYLLGGDYDHICHAIVNALAITSGMICDGAKPSC AAKIATAVDAGIMGCMMYQKGKQFYRGEGIVCRDIEETIMGVGQLARDGMKETDDEIIKL MIQN >gi|312957266|gb|AENW01000005.1| GENE 64 66116 - 67000 936 294 aa, chain + ## HITS:1 COG:CAC0023 KEGG:ns NR:ns ## COG: CAC0023 COG0583 # Protein_GI_number: 15893321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 5 293 1 289 299 160 30.0 2e-39 MGGFMELRTLRTFQRVAQLKSFSKAAAALGYTQAAVTIQIQQLEKELHTRLFDRFGKTIS LTQQGTIFYDYACRILDESEKAKLALQEAQELEGHLRIGMTESLCASSFPKLLHAFHTTY PHISISVETSSPEILLDMMNHNELDIVYFIDRRQYHPDWIRVVDEPEEIVFVCHPSHALT KRKSLILKDLLQEELILTESAASYRYELDQYALSIKQQVHPYLEIGNTEFIIRELLSECE ISFLPAFCVQPYVDQGRLSILRPRDFQLRVYRQIVYHKSKWLTPHMNAFLSFAS >gi|312957266|gb|AENW01000005.1| GENE 65 67117 - 68088 1045 323 aa, chain - ## HITS:1 COG:SPy1128 KEGG:ns NR:ns ## COG: SPy1128 COG0280 # Protein_GI_number: 15675108 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Streptococcus pyogenes M1 GAS # 4 322 10 330 331 265 42.0 1e-70 MKNLEHHLLGKHPRIGFAEGANPDVIRAAIRHVENGFILPVLIGHKKEILWHAKELGADI SGVEIADMESFANKAEMVSRMLMIRRGDWTREACEDKLKDINYFSTMYLELGYIDGLVGG VIATTAETMRPALQLIRTAENERTVSSCVLLERDNIHYIMGDCTLNVDPSVQELVEITLQ CARTARQFGIEPKVGILSYSSFGSGSGESVDKVRVVAEHLKRMPLDFAVDGEIQVDAAIS PIVAKVKAPHSAIAGEMNTLIFPNIDAGNIGYKIAVELGGFTMFGPILQGLRKPVNILTR RASVDTIYSIGIITGVQAVENRS >gi|312957266|gb|AENW01000005.1| GENE 66 68271 - 68621 410 116 aa, chain + ## HITS:1 COG:MTH1491 KEGG:ns NR:ns ## COG: MTH1491 COG1416 # Protein_GI_number: 15679488 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanothermobacter thermautotrophicus # 3 116 6 113 113 63 33.0 7e-11 MNVIFHIDEEKRWPLVQGNVTHMLAYCEQLQQDFHIEIVVNGRAVRQLKEEAAEQLEYKA VFCDFIKRGVIIAACRNAMKGQRMEEQELLNGVTTVASGVVELAVKQQAGYSYIKP >gi|312957266|gb|AENW01000005.1| GENE 67 68702 - 69376 654 224 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3720 NR:ns ## KEGG: Cphy_3720 # Name: not_defined # Def: phosphatase # Organism: C.phytofermentans # Pathway: not_defined # 8 213 4 213 223 150 40.0 3e-35 MLKKTAAWIREHPYALCLLYFIPYLIYFELLEAFAVPKFIIHCPLDDWIPFHEGFVIPYF AWFPMLAVSLGYFLFHSRRDFLDLCFIMFTGMTICLLIYTVLPNGLQLRPAVVRDNLLAR IAGMLYAIDTPTNVCPSIHVSSTVAIMIIVMRYQKFSHAALVKGFTLLCGIAVCLSTVVL KQHSVIDIVLGGLLTLILYKVCMQTDWMKYLRKLPYRKLLSRKS >gi|312957266|gb|AENW01000005.1| GENE 68 69449 - 70336 1112 295 aa, chain - ## HITS:1 COG:CAP0064 KEGG:ns NR:ns ## COG: CAP0064 COG3588 # Protein_GI_number: 15004768 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 295 1 295 295 363 61.0 1e-100 MSDPKRIRMHTGKGFIAALDQSGGSTPKALRLYGIAEDAYHSDEEMFDLVHEMRTRILTC PSFTSEHILAAILFENTMERKVNNEYTADYLWNQKGILPILKVDKGLAPLENGVQLMKEI PQLEELLERAKQRHIFGTKMRSVIRESNTDGIRAIVEQQFAIGKRICAAGLVPILEPEVD ITASDKADCEVLLKAEIKKHLAKLTADEIIMFKLTIPSVDGFYTELMNDPHVLRIVALSG GYTRDEANERLARNPGLIASFSRALSQGLCVTQSDDEFEALLKSSIQSIYDASIT >gi|312957266|gb|AENW01000005.1| GENE 69 70537 - 71277 886 246 aa, chain - ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 3 244 11 255 264 305 57.0 7e-83 MSVKGAIHSIETFGSVDGPGVRFVIFLKGCAMRCQYCHNPDTWKCGEPDTDSEALLKRAM RYRSYWGKNGGITVSGGEPLLQIDFLLDLFQKAKKENIHTVLDTAGNPFTGEGDFFDKFQ ELMNVTDLILLDLKVYDEKKHRALTGKSNRNILDLAKYLSDIGKPVWIRHVLVPGINDSD EDLQKLDTFLQTLHNVARVEILPYHTLGAYKWEELGYTYALKDVLPPDKALVKHANELLH TAQYDS >gi|312957266|gb|AENW01000005.1| GENE 70 71339 - 73618 2539 759 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 14 759 3 743 743 1013 64.0 0 MKQEDAGFMMNERKEWEGFTGRLWKEEINVRDFIQNNYKPYDGDESFLAEPTEATNKLWQ ELQKLQKEERAKNGVLDMETEIVSSLTSYGPGYIKDELKDLEAVVGLQTDKPLKRAFMPY GGIKMSEEACTTYGYEPSEKLHEIFHEYHKTHNDAVFDCYTPEMRLARRNKIVTGLPDTY GRGRIVGDYRRVALYGIDYLIEQKQKDKANCGCGVMSDDIIRQREELAEQIKALKGMKAM AALYGFDISGPATTAKEAVQWLYFGYLAAIKTQNGAAMSVGRVSTFLDIYIERDLEAGIL TESEAQELIDHMTMKFRMVKFARIPSYNQLFSGDPVWATLDLAGLGMDGRHMVTKSDFRF LHTLENMGPAPEPNLTVLYSSHLPESFKTYSARISIETSSVQYENDDVMRPVWGDDYAVC CCVSATQTGKEMQFFGARANLAKCLLYAINGGVDEKTKAQVGPEYRPITSEYLDYDEVMH KYDNMMEWLADLYVNILNLIQYMHDKYYYESSLMALIDTDVRRTFATGIAGFSHVVDSLA AIKYAKVKTVRDEDGLVIDYEIEGDFPRYGNDDDRADDIAVWLLKTFMEKIEKRHTYRDS EPTTSILTITSNVVYGKATGALPDGRKAGEPLSPGANPSYGAEQNGLLASLNSVTKLPYE YALDGISNTQTISPDALGHNEDERADNLVHVLDGYFDQGAHHLNVNVFGIEKLHDAMEHP EKEEYANFTIRVSGYAVKFIDLTREQQLDVISRTCHASL >gi|312957266|gb|AENW01000005.1| GENE 71 74128 - 74949 803 273 aa, chain - ## HITS:1 COG:MA0415 KEGG:ns NR:ns ## COG: MA0415 COG1028 # Protein_GI_number: 20089308 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Methanosarcina acetivorans str.C2A # 3 269 6 252 256 160 37.0 2e-39 MFTERFKDKVMVVTGGTSGIGKAVCIRAGAEGATVVIAGRNEERGKAIEQTITDNGGKAL FVRCDVTKKEDIIALYAKTMEVYGRIDIAINNAGIVGDSKKIEDLTDDDWFSVVNANLNA MFYCIREEVKYMMKNENGGSIVNTASVAGIRATPAGPAYVASKHGVVGLTKSTAMDYAGK NITCNAICPAGTDTPLTEAAKEKIYAIIADLKAQGKDPQEFMKNSMIAGKTETLQHRNAT SEEQAATILYFASDEARHITGSIVASDGGFTVY >gi|312957266|gb|AENW01000005.1| GENE 72 75134 - 75892 560 252 aa, chain - ## HITS:1 COG:VNG0893G KEGG:ns NR:ns ## COG: VNG0893G COG2820 # Protein_GI_number: 15790029 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Halobacterium sp. NRC-1 # 4 224 15 235 273 129 34.0 4e-30 MSIHLKELKHGDLGEATIIVGDPGRVSLLAEAFDKRSIIVNNREFLLMNGYYKNQKVSVC STGIGVGSTEICVSELLENGAKQIVRCGGCGAWRDDIEPGDIILNTGMARTTGLMTTYVP DTYPAVADSLLVSRIAKHLSGSKKIHIGLGLTAETYYIGQGRGITIKGKALPVPNMIEEW SNLGIMNCEMETAVLYILASLYQIPAANCLAVHVSRKNEKWECEEDYRKLHFEMAQLVLD AMLEPSSQHENG >gi|312957266|gb|AENW01000005.1| GENE 73 75905 - 77122 1011 405 aa, chain - ## HITS:1 COG:SPy1340 KEGG:ns NR:ns ## COG: SPy1340 COG0477 # Protein_GI_number: 15675278 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pyogenes M1 GAS # 6 387 4 388 406 305 47.0 7e-83 MSQERMNMSTYQKTALGTTMAGLGMQSCSTMLLSYVLTSIIADFAISSTAGGAISTITNL GMLAGGIIFGTLADKYGRVKIFAITVAIFSIATGLTACSTSITAIYVLRFLVGVGGGGEY GVIMSIIADSFAEGKRGRITSFVTIAGQLGSIIAAIGAALIIPTFGWRGLFVFGALPIFL AVFILWKLPESEAWKAVKKESVTKKSGIRDLFTEGRAFTTIRLTIMAIVQVAGYFGLMNW LPSILQNKAGLSISGSSIWMIATIIGMSLGMLVFGQIMDKIGAKTAYASFLIASAIAVFA YSFADSAMLILVGGAIVGFFANGMNAGYGAIVGNLYPTHIRATANNIIFNIGRAIGGFSS IAIGFFLDNYSLTVAMAFLTVLYCISLITVTTLQIHKPKPAETQA >gi|312957266|gb|AENW01000005.1| GENE 74 77363 - 78553 813 396 aa, chain + ## HITS:1 COG:BH2731 KEGG:ns NR:ns ## COG: BH2731 COG3835 # Protein_GI_number: 15615294 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Bacillus halodurans # 279 391 260 371 371 67 31.0 6e-11 MIYLSTIMSSDIWDLKALYEGANVQRLVASVTIMESLPIREWAKGGELLLTSSRTLPENE QDLLELLHDMQRLSTAALAVKCRETDEHMARVKRLSILAQEWQIPIFLIPPQRTYLSLTN AINRLLSLADEQDTLKEYLMRYLLLSTDPFKDLIVRRCTQSLQLALFQNELQLIQFQIDR ESTNAQLSEQKRYSIFLHVCTIYERMKQQHLLHDFLFMHTNTAIYTAVILKASQFSSACI QELKQLIPVYPDLQIGISSVQKAANIAELMKEAEFSVHVGLTLQKQQIILYPKVQLLRII QELQQQDKTNYFQQTIAPLKEYPFLLDTLIKYFRNNENQKQTCKELFIHVNTLQYRLKKI EALCGLHMNDMQEKINLYVSLLSHMMENWRNDNDND >gi|312957266|gb|AENW01000005.1| GENE 75 78540 - 79292 278 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 228 1 236 245 111 35 2e-23 MTMIELKNISKCFTTANGERIQAIKDVSLAIHEHEFISIIGPSGCGKSTLLRIVSELQER DGGEIVFHDNTLKENLGFVFQDSVLFPWKSVYENIIMPLEIKHQKTPESLMRVEKLLELM KLKEFRNSLPKELSGGMKQRASIARSLSYDPKLLLMDEPFGALDALTRDYLNLELRRLWK QTKKTILFVTHDIEEAVFLSTRVAVLSNRPSKIRDIITIDLPQERSLKLREAIEFTDYVS RLRGMLNEQA >gi|312957266|gb|AENW01000005.1| GENE 76 79279 - 80046 269 255 aa, chain + ## HITS:1 COG:mlr6798 KEGG:ns NR:ns ## COG: mlr6798 COG0600 # Protein_GI_number: 13475671 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Mesorhizobium loti # 16 245 36 263 275 140 35.0 3e-33 MSRHKKEAIWYTLLSLSVFIFLWYAYVTFFHIPSFILPTPTAVAKEMVFQLTQMDFYKNL LYTLSEVLFGFALSVLFGIIVGYCIGKHPHIKQLSMPLLVFFQVSPKIALIPIFIIWFGL GYGSKLFIVFIMSFFPIIEGVLLGLGHIPKEMYAYMQVLNADRRQIFTQLEFPCCIPYLL SSFKISILQAIIGATVAEWMAGQLGIGYLQSFASSTFDSPLLISGILFTILLGILLYAAV NLLEQRLQRYQEVKQ >gi|312957266|gb|AENW01000005.1| GENE 77 80043 - 81050 584 335 aa, chain + ## HITS:1 COG:PA3513 KEGG:ns NR:ns ## COG: PA3513 COG0715 # Protein_GI_number: 15598709 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 43 248 38 244 335 109 29.0 9e-24 MKKFCFILLSLCLLSGCTGSSFHPYKNTDGLFEVDIQIDGAATPYYAPLYLAQEKGYFKE EGLQVNFYYASAAEIVKNVGAGNVPFGFPNADTVLLGRGNGVPVNIIHTTYQKGLGAIIY KSESGIHKIQDLKGKTIAITSYGSPNYIQLKVILQQNGLSIHDVQIKVIGTGAIVNALVS NQVDAICFSKLRTYELQSSGIDVKQFLSNDYMPSYGNVVITSQTFLKEHPEICRGFTNAL NRGMQDIIEGQVQEAVNIAKEKFTPSIAGSEQKYIDIISQEFVKNLWVSEDTAVYGYGYS NLHDYQIYIDLLQKNGLFKTSFPADELIVQPGGAS >gi|312957266|gb|AENW01000005.1| GENE 78 81047 - 81796 583 249 aa, chain + ## HITS:1 COG:mlr6798 KEGG:ns NR:ns ## COG: mlr6798 COG0600 # Protein_GI_number: 13475671 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Mesorhizobium loti # 7 248 29 268 275 134 28.0 2e-31 MKKTRIYVEMCVLLTCLLILWQFITIIFHIPSYYLPSPVDFFKYFIQFMQSGNMGLHITT TLYEIFIGTFWGIILGMILGYLLAKNRLLEHLLMPLLLIMQISPKISIAPLFILWFGLGL TSKIALVILVVSFPIMVAESSALKKINSGYRDLMNILQANRWQIFIRMELPCAFHEVISG SKVAVTQAITSAVIGEMMGAKAGLGYLLTNGAEMYDLNMILSSIFLLSLLGLLLYEACQI VEHRVLYWK >gi|312957266|gb|AENW01000005.1| GENE 79 81975 - 85193 3551 1072 aa, chain - ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 1 1067 1 1058 1071 1450 67.0 0 MTKRTDMKKILVIGSGPIVIGQAAEFDYAGSQACQSLREEGYEVVLINSNPATIMTDTAI ADRVYIEPLTLEFASRIIYKERPDAILGSLGGQTGLNLVVELAESGILEEYDVEILGTDL AAINKAEDRELFRNLMYEINEPVPESDIVHTVEEAIAFANSIGYPVVVRPAYTLGGTGGG FADTEEELRIIADNGLKLSPVHQCLIERSIAGFKEIEYEVMRDNNDNAIVVCNMENIDPV GIHTGDSMVVAPVQTLSDREHQMLRNASLKIIRALKICGGCNVQLALDPNSFKYYIIEVN PRVSRSSALASKATGYPIAKLAAKIAVGMTLDEIINPITKTSYACFEPSLDYIVTKLARF PFDKFERADRRLGTQMKATGEVMSIGRNFEESFLKAVRSLEMKCDHIDHKEIDACTTEQL WEKIAVKDDLRMFGIAELIRRKESLARIHEITKIDMFFLHKFANIISLEEEMMAHPQDLT VLRTLKENGFADSYIARKWGMKERSLYELRKNNGIVPVYKMVDTCAAEFESATPYFYSTY EQETESFRTDRKKIIVLGSGPIRIGQGVEFDYATVHCVMTLRERGYEAIVINNNPETVST DFSISDKLYFEPLTIEDVMHVVDLEQPLGVIVQFGGQTAINLADKLVERGVKILGTSLKD IDRAEDRHAFEAMLHTLDIPQPQGETAVEVEEAVNIANRIGYPVLVRPSYVLGGRAMEIV HNDDDLRVYMATAVKEISHDAPILVDKYIVGKELEIDAICDGEHVYIPGIMEHIERAGIH SGDSISVYPPQTISDKVRDTIVDYSIRIGKGFHFIGLFNIQFIVEAPKDGKEEMVYVLEV NPRSSRTVPFLSKITGVAMSHIATRCVLGDSLAEQGYEEGIRPFENRVFVKAPVFSFAKL RSVDTVLGPEMKSTGEALGGDVTLEKALYKALLASGIRIPNHGNVLMTIADDDKEEGLRM AKRFSAIGYGIYATSGTAKFLQENGLFVKTVNKISQEGDLNVLDVIRKGKVNYVINTMSS EDKEVTNDGFLIRRVSAENNISCFTSFDTANAILKVLEALNFTTISMNELEH >gi|312957266|gb|AENW01000005.1| GENE 80 85195 - 86271 1189 358 aa, chain - ## HITS:1 COG:BS_pyrAA KEGG:ns NR:ns ## COG: BS_pyrAA COG0505 # Protein_GI_number: 16078615 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Bacillus subtilis # 3 354 2 351 364 469 58.0 1e-132 MKKRLLILEDGSVYEGCGFGADHYQVGELVFNTGMSGYQEVLSDLSYCGQIVMMTYPMIG NYGINRDDFESLDPAVFGFVVKEYCAQPSNFRCDLTLDEFLKLKEIPGICHVDTRAITRK LRSSGTMRAIMANADADVDAMVRLLKETDFLHDQVARVSTQKPFPIPARGKKVVLMDFGA KHGIIRELSRRSCDLVVVPYNTSAQAILALHPDGIMLSNGPGDPKDMTGAIKEIRELIKH VPVFGICLGHQLISLACGANTVKLKFGHRGCNHPVLNLSSKKVEITSQNHGYAVEAESLA NTDLIMTHQALNDKSVEGVRHKRYPVFSVQYHPEAAPGPEDANYLFDQFMKLMEKENV >gi|312957266|gb|AENW01000005.1| GENE 81 86368 - 87006 998 212 aa, chain - ## HITS:1 COG:BS_pyrE KEGG:ns NR:ns ## COG: BS_pyrE COG0461 # Protein_GI_number: 16078620 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Bacillus subtilis # 3 212 7 216 216 245 56.0 5e-65 MNIEKTVAKNLLDIQAVSLQPNNPFTWASGIKSPIYCDNRLVLSFPEKRTVVVQGFVELI KQEYAEAEVIVGTATAGIPWGAMVADKLEKPFGYVRSSNKSHGKGNKIEGKIEQGAKVVV VEDLISTGGSVKDVIESLREAGAEVLGVVAIFTYLLPASTELFHSISCEFKTLSNYDVLI DVALEHAYIKDGDLEKLKAWKQDPKDESWMEK >gi|312957266|gb|AENW01000005.1| GENE 82 87007 - 87708 961 233 aa, chain - ## HITS:1 COG:BS_pyrF KEGG:ns NR:ns ## COG: BS_pyrF COG0284 # Protein_GI_number: 16078619 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Bacillus subtilis # 5 232 7 236 239 256 59.0 3e-68 MSKTMVALDFSTRKEVYEFLLKFQEPIYVKIGMELTYSFGFEIVREVKAMGHQIFLDLKL HDIPNTVKQAMKNLAKLDVDVVNLHAAGGSAMMKAAIEGLEEGAVNGKRPLCIAVTQLTS TSNEAMNEELLIPGDVKDVVISYAKLAKESGLDGVVCSVHEAKAIHEACGSDFLTVTPGI RLADDSKDDQKRVATPAFAKEQGCDYIVVGRSITKSADPVATYHEIEKTMEGK >gi|312957266|gb|AENW01000005.1| GENE 83 87708 - 88616 1191 302 aa, chain - ## HITS:1 COG:BS_pyrD KEGG:ns NR:ns ## COG: BS_pyrD COG0167 # Protein_GI_number: 16078618 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus subtilis # 3 301 2 300 311 396 66.0 1e-110 MDLHVELPGLHLKNPIIPASGCFGFGREFAELYDLSLLGGIAIKSATPHSRFGNPTPRVA ETPCGMLNAIGLQNPGVDVIMERELPWLAQFDTEIIANVAGASEEEYVEVITKLNKSEVV KAYELNISCPNVKHGGIGLGTDPKLAASVTRMAKEAAEKPVYVKLSPNVTNIVEIAKAVE EAGADGLVLINTLMGMRMDLHTGKPLLANVTGGLSGPAIKPVAVCMVHQVASAVNIPIIG VGGITRAEDVLEFLYAGASAVEVGMQNFIDPLCCVKIIEDLPKVLKKYGNNSLNDAVGRS FR >gi|312957266|gb|AENW01000005.1| GENE 84 88616 - 89362 812 248 aa, chain - ## HITS:1 COG:FN0423 KEGG:ns NR:ns ## COG: FN0423 COG0543 # Protein_GI_number: 19703765 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Fusobacterium nucleatum # 1 247 1 257 259 206 46.0 5e-53 MQEEKGLILSNKRIAKDTYRMEIQASIAKDMKPGQFVNVAVEGFMLRRPISICSVEDKTR FVIIYKVVGDGTAKLSTLRTQGIIDVFGPLGSSYPIHEEEHEVLLIGGGVGVPPLYELAK QYRNINASVNVVLGFNDQESVFYENEFQRLGCHVAVATMDGSYGTKGTVMDAIREHNITT EFTCSCGPRPMLKAVEAHYTRGYMSFESRMACGIGACMACVAKDKLEENMYHRICKEGPV FPIGKVEY >gi|312957266|gb|AENW01000005.1| GENE 85 89364 - 92579 3911 1071 aa, chain - ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 1 1066 1 1058 1071 1396 65.0 0 MPKRNDIKKIMVIGSGPIVIGQAAEFDYAGCQACTSLREEGYEVILINSNPATIMTDTVI ADRVYIEPLTLEFASRVIYKERPDAILGSLGGQTGLNLVVELAESGILDEYHVEILGTAL DAIEKAEDRDKFRELMYEIGEPVPESVIVHTIEEAVAFACENGYPVVVRPAFTLGGTGGG FAHSEEELRVICDNGLKISPVHQCLIEQSIAGYKEIEYEVMRDNADNAIVVCNMENVDPV GIHTGDSIVVAPTQTLTDRECGIMRASALKIIRALKICGGCNVQLALDPNSFNYYVIEVN PRVSRSSALASKATGYPIAKLAAKVAVGLTLDEIINPVTTTSYACVEPCIDYVVTKFPRF AFDKFPKADRTLGTQMKATGEVMSIGRTFDEAILKAIRSLEMKTDHLEQKDINAMNEDAL WKKLAQCDDERIYVITALLRKGADIEDIFAVTKMDRYFLNRFKNIVAQETVIRQHPMDLN VLQASKKMGFADSWIARSWNVEEAALYDTRKQNGIMPVYKNVDTCAGEYVSHTPYLYSTY EHENESVCSDNRKIIVLGSGPIRIGQGVEFDYATVHCVKTIRERGYEAIVINNNPETVST DYSISDKLYFEPLTIEDVMHVIDLEQPLGVVVQFGGQTAINLADKLVARGVKILGTSLED IDRAEDRHEFEEMLHKLDIPQPQGETAVEVEEAVKIANRIGYPVLVRPSYVLGGRAMEIV HNDDDLRVYMATAVKEISHDAPILVDKYIIGKEMEVDAICDGEHVYIPGIMEHIERAGVH SGDSISVYPAPTASQKVKDTIIDYATRIGKGFHFIGLYNIQFIVETDKKSGEERVYVLEV NPRSSRTVPFLSKVTNVGMSYVATRCVLGDSLKDQGYEEGVHPEGERVFVKAPVFSFAKL RSVDTTLGPEMKSTGEALGGDVTLEKALYKALLASGVKIPLHGNVLITVADDDKQEGLKI AKRFSAIGYGIYATKGTAQYLSSNGIYVKTVDKVKEETDNNVIDVIRKGRVNYVVNTMSI SSEVNRDGFEIRRAAAENNISCFTSLDTANAILRVLESQTFTTISMNELEG >gi|312957266|gb|AENW01000005.1| GENE 86 92581 - 93660 1418 359 aa, chain - ## HITS:1 COG:BS_pyrAA KEGG:ns NR:ns ## COG: BS_pyrAA COG0505 # Protein_GI_number: 16078615 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Bacillus subtilis # 3 359 2 356 364 394 50.0 1e-109 MKKRLLILEDSSVYEGIAFGGDRYQMGELIFQTGMSGYQEIISDLSYYGQIVMMTYPAMG NCGINRDDFESISPKMFGFVVKEYCETPSNFRSDMTLDAFMKLKGIPGIADIDTREITRK IRDHGTCKAIMADADADVEAIVKQLRESELPKDGVQAVSTVKPFPIPSRGQKVVMVDIGT KFAVIREFNMRGCDLIVVPYNMSAQDILAIHPDGIVYSGGPGAPEDIPETVVTCKELLGS VPMLGIGLGHEVIAAACGANVVKMKVGHHGNSSPVRNLKKQKIEFTAQNHGYEVEPDSIK GTGLITTYTALNDGSIEGFTHETYPLYSYSFEPEAAPGADDCTYIFDDFCNVMKERSAE >gi|312957266|gb|AENW01000005.1| GENE 87 93657 - 94949 1421 430 aa, chain - ## HITS:1 COG:BH2538 KEGG:ns NR:ns ## COG: BH2538 COG0044 # Protein_GI_number: 15615101 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Bacillus halodurans # 3 426 4 425 428 391 48.0 1e-108 MKLIQQARILTKGNETEIMDVLFDERQIVKIAKHIDPALAQEVIPAENCVLLSGLIDVHA HLREPGYAHKETIASGTAAAAHGGFTTIMAMPNVIPYPDNTETMKTYLTKIKQDSRVHVI PYACITKAEASQKLSDMEGLSAMGIHAFSDDGVGVATADMMKAAMQKCREVDGIIVAHTE DMSYRKPNACMHEGIRSKQLGLTGIPSACEYAQFQRDLALVRETGCRYHVCHMSAQESVE SLRRAKKEGLDVSGEVTAHHLLLNEMAVENANHKMNPPLRSEEDRQALIQGLLDGTIDMI ANDHAPHSEEEKSRGMEKAPFGIVALETAFPLLYTRFVKEEGIFTLEQLVYWMSEAPAKR FQMERRGKLKEGNASDFVLMDLDSVRKIEKQGFYSMGKNTPFDGIVCSGFAVKTFVDGIC VYDNREGLLK >gi|312957266|gb|AENW01000005.1| GENE 88 94987 - 95874 887 295 aa, chain - ## HITS:1 COG:BS_pyrB KEGG:ns NR:ns ## COG: BS_pyrB COG0540 # Protein_GI_number: 16078613 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Bacillus subtilis # 6 290 4 289 304 317 57.0 2e-86 MNKNSLLKICDLTSEEIFHILEDAAAFSSSQSDWQFPRKTLVANLFFEPSTRTHFSFASA EHQLGACVENFTAQGSSVEKGESLYDTVKTFESIGYDAVVIRHSQDEYFKELEDIQIPIL NAGDGCGNHPTQCLLDLLTIYQEFQTFQGIKVAVIGDITHSRVANSIKEALGMLGGEVAF SGPDEWVAKDAYYKRVDEAVQWADAVMMLRIQHERHKETMAMSRAEYLERYGLTKQRAAM MQPHAIIMHPAPVNRGVEIDSDLVEAENSRIFKQMSNGVLVRKAVIKRALGYEFE >gi|312957266|gb|AENW01000005.1| GENE 89 96332 - 96715 222 127 aa, chain + ## HITS:1 COG:no KEGG:CPF_0994 NR:ns ## KEGG: CPF_0994 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 1 125 1 125 127 110 51.0 1e-23 MAFWLFMLIMNLLIPFTMIGFGFYFQKHPPKEINELFGYRTSLSMKNEDTWKTAHVQFGR VWLIWGWFSAAFSFPCMLLLYGKSDTACGIYGVILCFLQCIVLLFTLFIVERRLHRIFHK DGTRKLR >gi|312957266|gb|AENW01000005.1| GENE 90 97026 - 97454 432 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400963|ref|ZP_06645108.1| ## NR: gi|293400963|ref|ZP_06645108.1| hypothetical protein HMPREF0863_01248 [Erysipelotrichaceae bacterium 5_2_54FAA] # 11 126 17 132 154 64 34.0 2e-09 METAKRQAQLLHLYLLELKNTLKKMDALNVLQRNPYIRSKAAKLVLQEVSESMQHCLDAQ LVFLASVSRLQLSDEAGLKGVRGASQILFDFQDEVLRQEILHQLLLKEETLQHRLQQFLT VNEHLLHKVLELPDQTRYEKQP >gi|312957266|gb|AENW01000005.1| GENE 91 97441 - 98403 847 320 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1685 NR:ns ## KEGG: CDR20291_1685 # Name: not_defined # Def: putative exonuclease # Organism: C.difficile_R20291 # Pathway: not_defined # 4 195 10 208 329 77 28.0 7e-13 MVHIYIDAEFDAVKINGKYCQMVVSLGAVLKKDAQEATFYSLVCPKNFRRLTSVVRKMTH LKDSDIRNANSFPDVLKQFMQWLQPYMESSSCRMYSFGPDDRRTLLQECARHHCDPSLFE GILDLQKQISAKVTYQNVLVSATLSLDDLKTAYAIEGAVEHNALTDASDLMRIHQASLLQ DPDRKAVQEIVERKLAKQREVAQKQQEKLLRIMKERFSQYTVLKCPVRLYPEIVEQFRLW EERDRNFHINIQKDSILLDGRELPREQTKISMRIDIEEIPSVTLSFTQGENVIEKKYLLI YRNATMVENILKRMLQHGNG >gi|312957266|gb|AENW01000005.1| GENE 92 98449 - 99681 1324 410 aa, chain - ## HITS:1 COG:TM1697 KEGG:ns NR:ns ## COG: TM1697 COG1092 # Protein_GI_number: 15644445 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Thermotoga maritima # 14 409 7 388 391 296 39.0 6e-80 MKTTREWKQVTITKKGTKKLQSGHPWVYEGEVLALEANIQNGDIVDVFSEKGSYQGSGLY NGNSRIRIRLLSRNANDRFDEDFFYRRLQHAISYRATVMGEDFDACRLIFGEADYLPGLT VDRFHDLLVVQTLSYGMEQRKDMLFPMLVKILRDEYHVAIRGIYERNDVAIRKLEGLEET KGWYAHSVLPKHPESCLTSIVENGISYDVDVENGQKTGFFLDQKYNRAAIARIAKGKHVL DCFTHTGSFALNAAKGGAAHVHAVDISQTAIDMAQHHADINGLQERMSFETADVFDLLKA LKKQPRVYDMIILDPPAFTKSRETISHAVKGYREINTAAMKLLPRGGYLATCSCSHFMNE GLFKSMLHEAAQAAGVSLRQIEARQQSCDHPILWNVPETSYLKFYIFQIA >gi|312957266|gb|AENW01000005.1| GENE 93 100114 - 100935 505 273 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 10 273 16 278 278 273 51.0 2e-73 MTTNFNEAKLTKSDLRKVFMRSCTLDSAWNYERQQNLMYCYSMIPVLKRLYGNDEEKMAD ALCRHLEFMSCTPHLVTLLMGITGAMEEENAKDENFDAASISAVKTSLMGPMAGIGDAFF WGTLLTIAIGVSVSFAKQGSIIGPIAFLLIINIPGFLARYYCLHAGFKYGVKFFGDSENS RMIENITKAASILGLMVIGAMIASTVSISIPFEIGVKGAKEPIQTYIDQIMPCLLPLTAF GIMYWLLGKNVKTTTILVCLIILACIGTFFGLL >gi|312957266|gb|AENW01000005.1| GENE 94 100919 - 101692 538 257 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 6 236 1 231 259 182 44.0 5e-46 MSDNLLIQALLITLVAFIGYMHCYWGSTMNNRPIIVAPLVGLVLGDMTTGIMVGATLELI FLGAVPIGASNPPDITSGAIIGTSFVILTGQEVGAAVALAVPVATLVLLFDNLQMMFILT WATHMADSYAKKGDYKKVEWVARFAGIGNKLILSIVVGVAFYLGVPVIKDVLSVIPQFII DGMDVAAGILPAVGFAMLARMIVTKELSPYLLAGFLLAAYMEMPVFGVALAGLVIAGLTF FHDSKKQREVVVDDNEF >gi|312957266|gb|AENW01000005.1| GENE 95 101714 - 102187 381 157 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 150 1 150 153 179 60.0 2e-45 MIKLLRIDHRLLHGQVAFSWTKFLESDCILIASDNLMKDELKMSAMRMAKPTGVKLVMKS IEDSIKALNSGVTDKYKLFIIVESVEDAYRLASGFPAIKSINIGGMKARENRKQISKAVF VSEEDIEKLRILGDKGIELEIRLVPSDSKQNALDLVK >gi|312957266|gb|AENW01000005.1| GENE 96 102189 - 102926 532 245 aa, chain - ## HITS:1 COG:PH1209 KEGG:ns NR:ns ## COG: PH1209 COG0434 # Protein_GI_number: 14591030 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Pyrococcus horikoshii # 11 243 4 257 259 82 28.0 1e-15 MNRKFLNLFKNEKPILAMLHLKGTSDEDIVRRFKEEIAIYAENGVDCIIVENYFGNYRHM EMALDYISKLNLVIPYGVNCLNVDPMGFELAEKYGASFVQLDSVVGHVKPRDEATLDAFF KLYRERYQGMVLGGVRFKYQPVLSQNSIEEDLQIAMQRCDAICVTQDATGQETSLDKIIQ FRNGIGDFPLIVGAGVTPENMAKQFAYADGAIVGSYFKDNYRDEGEVSQEHVREIVKAAQ KVRGK >gi|312957266|gb|AENW01000005.1| GENE 97 102937 - 103353 224 138 aa, chain - ## HITS:1 COG:SP2164 KEGG:ns NR:ns ## COG: SP2164 COG2893 # Protein_GI_number: 15901974 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 3 137 4 139 143 61 31.0 5e-10 MKRKIVLASHGGLASGLYDTAKMIVGKLPFDVEIYSLQPGGLAEDYGRKLKKEIAAHMNT EYVILTDLYGASVFTAMYLCTKLDNVRLFSGMNLNMLLSVCLEHPAPLNETDIEQILHDA KSGIQFTQQSKECEREEF >gi|312957266|gb|AENW01000005.1| GENE 98 103535 - 104281 440 248 aa, chain + ## HITS:1 COG:CAC3502 KEGG:ns NR:ns ## COG: CAC3502 COG2188 # Protein_GI_number: 15896739 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 11 244 2 237 237 104 31.0 2e-22 MIGFIGGPMQEIKQLNAITLQEQLYNELATQIKSGKYKPGDRIPPELKLSEIYRVSRVTV RNAIQQLVNEDLLIKKHGKGTYVKTQVYTEEFFSGGSFTDTCLRMKAKPSTQIIESTVCH DEAEINAIFGTTAPLIRIKRVRLVDDVPCIVEVDFFPDSFQFLLKKKLEKTSLLHLVTKE TGMHPAKFEDYFKIIFATKEFAKQLNCIVGTPLLEVTQTVLTPDNSIIYVNKQYILTTKY IYAVRSLK >gi|312957266|gb|AENW01000005.1| GENE 99 104369 - 105223 750 284 aa, chain - ## HITS:1 COG:lin0757 KEGG:ns NR:ns ## COG: lin0757 COG1408 # Protein_GI_number: 16799831 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Listeria innocua # 1 277 1 284 293 168 35.0 1e-41 MKKKTYTVAGAAFTAAALALSYHENRCLDVCHLRVRSAKLPASFAGFRIVQLSDLHTTRF GYHQKHLLRKIRMSAPDIIVITGDLIDRRRTAKNTMQPVVQLIKQAVTVAPVYYVPGNHE AVSPIYPHLKQVLLDYGVQVLENSKLELSRKEESISILGLKDKKFYPYASDRYFMNLHNL MQTVDTSFSVLLSHRPEHFADYAKEGVSLAFCGHAHGGQIVVPKLGALYAPDQGIFPSYT DGIYEHKGCTMVVSRGLGNSRAPQRINNRPQVMVVTLFPEEIRN >gi|312957266|gb|AENW01000005.1| GENE 100 105273 - 106172 741 299 aa, chain + ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 2 286 16 305 321 135 28.0 1e-31 MKQHIAFIGSSVADVIIRIPHLPVRQEDINIESQTLSLGGCAFNAAWMCRLLGGDPLFFS PVGTGIYGDFVRRQLQEHRIDILLESKEENGCCFCLVESDGERTFLSHHGAEYRFQKEWF SLLDSYGVDTVYVCGLELEEKTGIYILDYLQKHPQLTIYFAPGPRLSALSQGCIKTLFNL HCILHLNEEEACSFTGCPTAQQAAESLYERTHNIVIITLGSRGCLLQQEGKCTHIPTEAV QIQDTIGAGDAHIGSIIALREQGYSWQDTLRIANRICGYIVSIPGALMHEDELTALSLF >gi|312957266|gb|AENW01000005.1| GENE 101 106164 - 106709 570 181 aa, chain - ## HITS:1 COG:BS_ytiB KEGG:ns NR:ns ## COG: BS_ytiB COG0288 # Protein_GI_number: 16080121 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus subtilis # 1 176 3 178 187 210 48.0 1e-54 MIEDLLSYNEEFVKNKGYEPYQTSKYPDRRLAIVTCMDTRLIELLPAALGIKNGDAKIIK NAGGVITHPFGSVVRSLLIAIYELGVEEILVIGHTDCGVQHMDAENLLENMRKRGISNNA IESLRYCGIDFDRWLEGFDDGCVSVAKSVELLKKHPLIPKDVRIYGFMMDSISGKLSSVS E >gi|312957266|gb|AENW01000005.1| GENE 102 106739 - 107479 731 246 aa, chain - ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 19 146 1363 1498 1661 65 34.0 8e-11 MIKACVLCGVCISVFLTPVQAKEEVVQGVVQVQDDTGKPLEGAAFQLISYGEPLQELTSD KTGRIVLHDLDYGEYQLIQTQTDYGYQKTKQRISFVYDGTQEKKQSWKVVNERMLGTVKL RIRQENDEKISHVSMELLDEQGKKLRNITSDRDSIELQKLPIGTYCLHLDEKEKDYRLKE DVTFAITPYNYNRSYVLTLHLEPVKQKQEDYTFAFCFIMAVLGLFAWLIYFFRKQSLTQF LDDFMV >gi|312957266|gb|AENW01000005.1| GENE 103 107589 - 107987 507 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHIEVIDEQGVHLQNTYERRARGLVKKGRAYYVTASCICLFTPPENMEEKTLETNNKKD ILTRIDTILQQKEYLQEAFSAIEKIPHDLNEELTAIRTKTILEIVEAREKTNQEVVALLH AMLDQDVIPQGE >gi|312957266|gb|AENW01000005.1| GENE 104 108155 - 108934 1150 259 aa, chain - ## HITS:1 COG:BS_yqiX KEGG:ns NR:ns ## COG: BS_yqiX COG0834 # Protein_GI_number: 16079454 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 1 258 1 251 255 159 40.0 4e-39 MKKLLTGLMAVVMMAGLAGCGSKDDGAGEGSDTAKKELTVYTNSGYKPYEMVDEKGNLYG FDIDVMNEAAKLAGYTVKWEDVDFDGIVPSVKQGKADIGIAGITYTEERAKQVDFSDVYY AGEDAQNYVLTMKSSGMKKTEDIKGKKIGTQMGTIQESILNSLQDEYKLKLDKRKAYSDM VLEMKKGVIDAMVVEKAVAEELAADNEDLSYYKFEAGAELAGNAMIFQKDNKLKDEFNKA IKTMKENGKMDELVKKYFK >gi|312957266|gb|AENW01000005.1| GENE 105 108959 - 109684 500 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 240 1 242 245 197 42 4e-49 MIRVEHLYKNYGDSVKVLFDVNFTFEDGKTYAIIGSSGGGKSTFIRCLNMLEVPTSGDIF YNETKINDPKTDLARVREKIGMVFQNFNLFDHMKAIDNVTYALRKVKKMNAEEARAKGLS LLEKVGLRHRADAYPHQLSGGEKQRCAIARALAMEPDVLLFDEPTSALDPEMTGEVLKVL QDLNHTGITMIVVTHEMNFAKKVADYVIYMDKGNIEECSKAAEFFEKPKTARAKEFLSKM I >gi|312957266|gb|AENW01000005.1| GENE 106 109677 - 110333 861 218 aa, chain - ## HITS:1 COG:BS_yqiY KEGG:ns NR:ns ## COG: BS_yqiY COG0765 # Protein_GI_number: 16079453 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Bacillus subtilis # 1 216 1 216 219 167 44.0 2e-41 MNFDITVIERFWQLLLSGVPVILGLSLASAFFGTLIGLATVFLRRMNKVFNLIVAAYIDL FRGTPVYVQMFFIYFGIPSLVPGLNINNWVAGILVFSLNSGAYMSEIMRAGIDGIDKGQI EAAKALGVSGKDIGKDIIIPQAFRNVLPAVINEFITLTKETSIVSVIGLHDMMYWFYAVK NQTYADFEPLLIVFLVYYIMNKVLSLIGKAIERKLKYD >gi|312957266|gb|AENW01000005.1| GENE 107 110788 - 111294 608 168 aa, chain + ## HITS:1 COG:BH1295_1 KEGG:ns NR:ns ## COG: BH1295_1 COG3409 # Protein_GI_number: 15613858 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Bacillus halodurans # 39 166 272 389 459 75 35.0 4e-14 MISTAALKPGSIGIGVNKQQAYLNMMQEKGFINTRNLQDGVYGTRTEQAVREWQRYANLP IDGEIGNDTWDSIVNKLRDLQIVTNIPVASSSYYLSSGAQGISVFKMQEYLNEIAAVNKC LRPIPVDGMYGPRTTTMVQQFQYLYDLNIDGVIGKATWDAIVNERNKL >gi|312957266|gb|AENW01000005.1| GENE 108 111435 - 112052 642 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400971|ref|ZP_06645116.1| ## NR: gi|293400971|ref|ZP_06645116.1| hypothetical protein HMPREF0863_01256 [Erysipelotrichaceae bacterium 5_2_54FAA] # 10 205 24 219 219 186 52.0 7e-46 MDEMMSETAFDTRLNVLWERFFALQNHAGADVQEPLHDLMTHPKEELDDASYMKLMYMKG LCYEEQGNKNAARYCAMRMYAIQECMRNPRKKRPRFLDLQGYACSDAMNAFIERYTAFLE ETYRGINRRLLMIVGILFLAVFLVLTLFLKIYFIIAALESIMLGMLTYLLQKRRMPDIFQ KNQLNAIEKYVEQEVLEFDRPIRFS >gi|312957266|gb|AENW01000005.1| GENE 109 112264 - 113118 1095 284 aa, chain - ## HITS:1 COG:CAC1355 KEGG:ns NR:ns ## COG: CAC1355 COG3711 # Protein_GI_number: 15894634 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Clostridium acetobutylicum # 2 273 8 280 287 155 31.0 1e-37 MYTVVKTLNNNSVLVQDASGVSMIFLGKGIGFGKKNGDSITLGAGVELYRFTETNDHGDA MEIIQEVNPVFIEVAGRILQLAQARFHEVDKNILLPLADHIAFSIERMKANMDISNPFAS EIALLYREEYEVALQGKAIIEEMCGYTINEGEIGYITLHVHSARGEDKVSEAMQTAVIIR DSIEEVERDYGISIDTNSMSYTRLMNHMKFLMLRLQSDEELQMDVGDYVSKQFPYAYKTA QKICEELRKVYHKDIPETEIGYLALHIERVRTSEMKELKERIAG >gi|312957266|gb|AENW01000005.1| GENE 110 113157 - 114761 1578 534 aa, chain - ## HITS:1 COG:BBB29_1 KEGG:ns NR:ns ## COG: BBB29_1 COG1263 # Protein_GI_number: 11497021 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Borrelia burgdorferi # 1 425 10 454 469 430 54.0 1e-120 MLNVLQRVGRSFMLPIAILPVAGLLLGIGESLSNPNMIAAYGLQWLLGEGTFFYMIFKVM SNAGNIVFTNLPLIFAMGVALGMAKKEKEVAVLASAISFFIMHTSIATMLELTDMAGSLP EGSVTSVTGITSLQMGMFGGVLVGLGTAALHNRFYKIQLPRILSFFGGTRFVPIICSIVY LLVGILMFYIWPVLQEGIYMLGDIVQRSGYYGTFLYGVIERALIPFGLHHVFYLPFWQTA VGGTMEIAGVSVQGAQNIFFAQLADPNTVRFSVEATRFMSGKFPLMMFGLPGAALAMYHC ALPKKQKIAGGLLISAALTSMLTGITEPLEYTFLFAAPLLYVIHCVLAGCAFMLMHMLQV GVGLTFSGGLIDLFLFGILQGNAKTNWIMIVVVGVFYFIIYYVLFTFLIKRFDFKTPGRE SESQEIKVSERLAVVEKTDEGQQTEKKDSDADALSSLICAGLGGKDNIISLDCCATRLHV AMKDPMQMDDILLQASGAAGIYKKSRGLQIIYGPRVTIIKSDLEDYLLRQAGKE >gi|312957266|gb|AENW01000005.1| GENE 111 114995 - 115390 353 131 aa, chain - ## HITS:1 COG:lin0146 KEGG:ns NR:ns ## COG: lin0146 COG4687 # Protein_GI_number: 16799223 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 125 1 125 129 134 52.0 6e-32 MVQSRNTTVDYTVKGISYMGLSAYGKIMVGNRAFEFYNDRNVKDYIQIPWDEVDTIVASV LFKGRKISRFAIMTKSSGTFSFSSRDNKALLRAVANYIDGERMVRSLSFLDVIKRSIRRI VHRKKEDPASC >gi|312957266|gb|AENW01000005.1| GENE 112 115441 - 116355 1161 304 aa, chain - ## HITS:1 COG:lin0145 KEGG:ns NR:ns ## COG: lin0145 COG3716 # Protein_GI_number: 16799222 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 2 304 3 303 303 415 69.0 1e-116 MEKITLSKKDRLSVAWRHQFLQGSWNYERMQNGGWCYSIIPAIKKLYPNKDDQIAALKRH MEFYNTHPYVSAPVMGVTLALEEERANGVSVDDAAIQGVKVGMMGPLAGVGDPVFWFTLR PILGALGASLALSGNIIGPLLFFVAWNVIRWAFIWYTQEFGYKVGTSIVKDLSGGLLGKI TSGASILGMFIIGSLVQRWVSISFTPVVSTVTQSKGAFIDWNNLSSGIDGVREAITQYDA LGSTGLNVEKVTTLQQNLDQLIPGLAALLLTLLCCWLLKKKVSPIIIIIALFIVGILARL GGVM >gi|312957266|gb|AENW01000005.1| GENE 113 116376 - 117194 1086 272 aa, chain - ## HITS:1 COG:lin0144 KEGG:ns NR:ns ## COG: lin0144 COG3715 # Protein_GI_number: 16799221 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 272 1 268 268 257 66.0 2e-68 MSIITILLIVIVALLAGMEGVLDEFQFHQPLVACTLIGIVSGHMKEGIILGGSLQMMALG WANVGAAIAPDAALASVASAIIMVLGLQGGATDVNNAISTSIAVAVPLSVAGLFLTMICR TIAIPMVHFMDAAAEKGNIRMMEVWQVLAILLQGVRIAIPAAALCVVSPGVVTDVLNQMP SWLSGGMAVGGGMVAAVGYAMVINMMATKETWPFFALGFVLAALNQLTLIALGVIGVVIA LIYLGLKEHGGSNNGGGSSNTGDPLGDILNDY >gi|312957266|gb|AENW01000005.1| GENE 114 117214 - 118194 1310 326 aa, chain - ## HITS:1 COG:lin0143_2 KEGG:ns NR:ns ## COG: lin0143_2 COG3444 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 164 325 1 162 165 238 79.0 1e-62 MVGIILASHGDFAKGILQSGEMIFGTQPNVKAVTLQPSEGPDDIRAKMEEAITTFENPEQ VLFMVDLWGGTPFNQTSGLINGHEDTWAVVTGLNLPMLIEAFASRMSMESAQEIAAHVYG VAKEGVRLLPEALEPAQEKQAAEPVTPQGAIPEGTVIGDGHIKYVLARIDSRLLHGQVAT AWTKTVKPTRIIVVSDGVAKDELRKNLIEQAAPPGVKANVVPVDKMIQVAKDPRFGNTKA MLLFETPQDALRAIEGGVDVKELNIGSMAHSVGKIAVSKVLSLGKDDVKTFEKLKAKGIQ FDVRKVPNDSKENMDDIIKKAKAELA >gi|312957266|gb|AENW01000005.1| GENE 115 118753 - 118923 212 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATIIISLLLLLLIILALRSIRKEESCSGGCSGCSKGCKSGQALYEAYQQGEKQQV >gi|312957266|gb|AENW01000005.1| GENE 116 118951 - 121098 2452 715 aa, chain - ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 1 699 1 699 709 711 51.0 0 MYRIALAGNPNCGKTTMFNALTGSNQYVGNWPGVTVEKKEGKLKGHKDIVITDLPGIYSL SPYSLDEVVARNYLVEEQPDLIINIIDATNLERNLYLTTQLQETGIPVVAALNMMDLMQQ NKTEVNTCKLSDLLNIPVVEVSALKNRGLDELIQKAVGMLSNKHTAFTNIYEGLLKDCLL KIADLSAVQAKGASSFWYAVKYLENDEKIMTSAPLNSTDSSIVNALRKELEDSYDDDAES IITNERYEYIAKLMKQTYVKKHSGMSVSDRIDRFVTNRWLALPIFAVVMYLVYYVSVTTV GTYVTDWTNNVLFGDIIPPAVTSFLEGIGTAGWLVSLLVDGIIAGIGAVLGFVPQMLVLF LFLAILEDCGYMARIAFIMDRIFRKFGLSGKSFIPMLIGTGCGVPGIMASRTIESEKDRR MTIMTTTFIPCSAKLPIIALIGGALFHGASWVAPSAYFVGIAAIILSGIMLKKTRMFAGD PSPFVMELPAYHVPKALNVLRSMWERGWSFIKKAGSIILLSTIFIWFTSNFGFVNGGFTM LEESQLNESFLANLGSAIAPLFAPLGWGDWQASVAAITGLVAKENVVATFGILYGFAEVA EDGSEIWGTLAASFTVAAAYSFLVFNLLCAPCFAAIGAIKREMNNAKWTIFAVAYQCVFA YVIAFMIFQFATFFTTGVFGIGLIIALLFLLVMLYLLFRPESKKQVHLEKVKVNA >gi|312957266|gb|AENW01000005.1| GENE 117 121151 - 121369 407 72 aa, chain - ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 3 71 80 148 152 70 46.0 1e-12 MTLKEVKPGNSVTIRRLNSTGSVKKKLMDMGLTKNTEVYIRKVAPLGDPIELTVRGYELS IRKADAALIEVE >gi|312957266|gb|AENW01000005.1| GENE 118 121383 - 121595 390 70 aa, chain - ## HITS:1 COG:no KEGG:CLD_3534 NR:ns ## KEGG: CLD_3534 # Name: not_defined # Def: putative ferrous iron transport protein A # Organism: C.botulinum_B1 # Pathway: not_defined # 1 67 1 67 69 68 55.0 7e-11 MVLTAAPIGKNFQIAKVNGKDEVRSHLAALGFVEGADVSVVNELSGNVIIHVKDTRIALD KSLSNRIHVK >gi|312957266|gb|AENW01000005.1| GENE 119 121802 - 122221 581 139 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 1 139 2 142 142 107 46.0 6e-24 MNILIAYWSGTGNTEAMANAVAQGVEKAGKHADVVHVADQPDVSAYDYIIFGCPAMGAEV LEESEFEPFFMQAEGTLMNKKVALFGSYGWGSGEWMQSWEERVEAAGANLFENGLIINYT PDADGLDACESLGERFANA >gi|312957266|gb|AENW01000005.1| GENE 120 122238 - 122786 569 182 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00570 NR:ns ## KEGG: EUBELI_00570 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 12 179 19 187 189 110 33.0 3e-23 MSFVELIAYYAAPTLEGMKPSCLFSCRDSEVGNVEELVLAYNRCLNPKRIYLQIMKHSPD FKLILVYHKDLLDTHLCQEDIQQFLSAFGYGFVTTRQALYHLQEHMCKECFPHEIGVFLG YPLDDVVSFIQNNGKNYQEIGYWKIYHNLSRARKTTARFLQSMECTLEKLQEGIPLEQLI TA >gi|312957266|gb|AENW01000005.1| GENE 121 123323 - 123664 268 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|266623605|ref|ZP_06116540.1| ## NR: gi|266623605|ref|ZP_06116540.1| putative heavy metal-associated domain protein [Clostridium hathewayi DSM 13479] # 1 112 1 117 128 63 31.0 5e-09 MATIIILILLVLYIVFAFHRSRKRIKNGCCGGGGPVFRDSVQTDQYAIHERYHIRGMHCE SCAASIEHRLNQMQDTAALVNLQKEVVDVYSNHPLNKEELFQAIQALGYEAYE >gi|312957266|gb|AENW01000005.1| GENE 122 123657 - 124061 345 134 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDISYNRRVHYYIALYELFQEQECLHCMDIARKLSISLPAASRMLQKLISEGLIEKKSY QSICLTQAGKGQLQTTYHTYCELISYFSRIPTFTEEDRLESSLLCLGSFPHSRIEKLVRS ADCIGTEKRCQTLR >gi|312957266|gb|AENW01000005.1| GENE 123 124104 - 124283 267 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401589|ref|ZP_06645731.1| ## NR: gi|293401589|ref|ZP_06645731.1| rubredoxin/rubrerythrin [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 59 5 62 64 71 56.0 1e-11 MTWMCSICGYTYDGEDFTKEADDYLCPLCDSGKESFQQRDLATEITAATNQYFAVKEEK >gi|312957266|gb|AENW01000005.1| GENE 124 124343 - 125641 1284 432 aa, chain - ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 1 428 1 426 426 503 58.0 1e-142 MKEKVYKFETLQLHAGQEEPDSATDARAVPIYATTSYVFKDSEQAAQRFALREGGNIYSR LMNPTSDVFEQRMAALENGAAALATASGSAAIDYAIRNIVTCGDHIVSSSTVYGGTYNLF ANTLTDSGITTSFVDGSDPKNFEEAIQDNTKAVYLESLGNPNADIIDLEAVSEIAHRHGI PVIVDNTFATPFLFRPLEHGADIVVHSATKFIGGHGTVMGGVIVDGGRFDWEQNDKFPGL SKPNPSYHGVVFTQAVGNIAYIMKIRTTLMRDQGACLSPFNSFLLLQGLETLSLRVERHV ENAGKVVDFLQKQPKVAAVHHPSLAQGREKELYERYYPKGGASIFTFEIKGSEEQARTFT ESLSVFSLLANVADVKSLVIHPASTTHSQMSAQELAAVKITPQTVRLSIGTEHIDDILED LRQGFAAISAGK >gi|312957266|gb|AENW01000005.1| GENE 125 125964 - 126782 887 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914519|ref|ZP_02076734.1| ## NR: gi|160914519|ref|ZP_02076734.1| hypothetical protein EUBDOL_00525 [Eubacterium dolichum DSM 3991] # 11 269 10 247 250 77 26.0 8e-13 MKTWLQRGVSLLLICLLAGPIAIQADTIEKIILTAKENQVETVLIPSDTKDTIRSLQLSF QIKAKQGKVLKEHVQFRFHRDIKSDVQEWRYQEDTGRLTIYLSGDEHLYAQDELRLGMVE LKLAAGTKAEVSVIEDSLKTVNDVYAVNEVSGMDAIAPVTIEKADSGDNNVPSETPDTNK PQENDKESTPEGKPDIPNTGKPDNSQENTPLDASKADTSEKAQNKGSVDKAEKGVDTGDK TQAQIYALGMLGALVAGSILWILRKKKELQIK >gi|312957266|gb|AENW01000005.1| GENE 126 126817 - 130485 3824 1222 aa, chain - ## HITS:1 COG:no KEGG:Elen_1817 NR:ns ## KEGG: Elen_1817 # Name: not_defined # Def: coagulation factor 5/8 type domain protein # Organism: E.lenta # Pathway: not_defined # 1 1220 555 1778 1787 1151 50.0 0 MKDTDSYHVFYKEETGDSFTKISNITKTNYTLEGLKDETTYILYVTGVNELGEGPGSMKV KASTLSVKRAQMPSYKLINDSSGEGKLTQHIVSAKHVVGSMVNSSLDTDVQSANGLVDDS YESYYRLEDWDDAVSYHQWQWGTTVQLDQEYTMDRFTLAAPMDTVGYGAAAIYYWDSEQN KEVQASNVRIQQKDDGQGRKYYVIKLAKPIKTSRVRFGLTTSGGVRNIMVAEIRFFQYDS LESDIQALFADDLHLTLAKDVDTELLNTLQQRLDTKNHGEYHPDQKALQVELDTAKQLYA EQDTLNDTIAVHANLRSNKDSGISVGGLNAWQPLGISAYAGQELVIYVGNPGMKTGQNSS LSLVATQQHAEASGFAKTVGNLKIGRNEITIPQITSTDVEKGGALYLQYNGNKDTDQYAV RVSSGTRVPTLDLYQVKDKEERMKRIRTYIEELQGFVPNLQQQHEKDHKTEGNEQVSYAY DEKTCVLNITDIMLDQMMYSIPASQVWNAVNDGSVEAGAEKLNASLNAMDDMMTLFYQHK GLTDNFKEGTAQNVKDKNHLPAQHLNIRYMKMFDGAFMYASGNHIGVEWGSTRGLVNSKP VEVDENGKKIGVGTYFGWGIAHEIGHNINQGSYAIAEITNNYFSLLAQADETNNGVRFKY EDVYKKVTSNVTGRSDNVFTQLGMYWQLHLAYDRGYNYRTYADYDEIFKNLFFARVDSYA RNTALAPAPNGIKLTLGKDAEQNIMRLASAAAEKDLSDFFQRWGMVMDADTKAYMQQFEK EARAIYYVNDEARAYEIEHGASEGISGRDVATASVSKNDRSSVTLTLGNTADQAEAILGY EIVRTTYDQGKQKDEVVGFTMDNKFTDQLGPVSNRSVSYKVTAIDKFLNRSAAVQVSPVK VEGDGSQVKDSWTITTNMLSKDDEQKPAEGEDPCAPQLKSAAYRMIDDGTAEENTYTGAS TNADPQITINMGKTTEVTALRYHRGTDERYDMTDYRIEISQDGKTFKKLKEGTFDFKDDV ATVYFQNADNDPWIATYDAVYVRITALNKKNSTLVIPELDILGPTGDNIEFYNEEAAETA SIGILKEDVILQEKDETHEEQKIEKGSLIFTGTYKGNPAYNVVMLYDEAGNIIGGTDAEG SLIANQVIFAPNPQNALLGEVSEGTWVYWIAEKDLNVEQLPEKVRAELYRVDNALTNEGQ RLVSDTLLVKIPEILPEITLTK >gi|312957266|gb|AENW01000005.1| GENE 127 130482 - 131771 1099 429 aa, chain - ## HITS:1 COG:no KEGG:Elen_1817 NR:ns ## KEGG: Elen_1817 # Name: not_defined # Def: coagulation factor 5/8 type domain protein # Organism: E.lenta # Pathway: not_defined # 28 428 146 553 1787 231 35.0 4e-59 MSERQSFQLTLKHGSEEETRTAVLEAAQGASAASAVFENLPEGTYSLQVAAKGYRTYEQI FQMDGYDQSIQLYLGTAPQLFEDVQPGLLAYAASNVQIKDFVDALDRGSVDSIYDINQDG TVDLADLQRLYDERREYKQQTSAIERRVPKSAVGVSIEAGTQLVSGKLEDVLAAESAVTL KHADGQAISTDHPLHLTFDFQQNENPIRMEGFTIQAPLESVNKIADGMILVEIEGQDEPL QVPIVNYYRSRRAASSPYVEMDARGNLIVHLGDQIAVKKVTIKVTKTTQAQGSLVEISKV EFLNDMETRIPEPEMNMPKNLQGTAGDKKFTVSWTPERNVTGYEVRIEADGYREVVKTTV PSVTVTQFKKDKLENKKEYMVSVQSVNGDWKSGYSAPITLTPQTSSKPAAPDDVKASGGY RSISLSWKT >gi|312957266|gb|AENW01000005.1| GENE 128 131934 - 132110 129 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRWFSLILAGCMLMQLTLGSSSGYMKAETESEEPAEVSDEVQVQNVEPQPEAAEEQE >gi|312957266|gb|AENW01000005.1| GENE 129 132484 - 135561 169 1025 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 886 1025 284 413 413 69 30 9e-11 MLQIKNIYKQYQTGSLIQKALDGVSLNLRDNEFVAILGPSGSGKTTLLNIIGGLDRYDQG DLIINGISTKKYRDRDWDSYRNHTIGFVFQSYNLIPHQTVLANVELALTISGISKAERRE KARKALEEVGLGNQGHKKPNQMSGGQMQRVAIARALVNDPDILLADEPTGALDSETSVQV MNLLKEVAKDRLVVMVTHNPELAQDYATRIVSLRDGRIRSDSNPYAVSEEGLEPPKHETM GKSSMSFLTSLSLSFNNLRTKKARTILTSFAGSIGIIGIALILSLSNGVNQYIQSIEEET LSEYPLQIQSTGFDITSMMTDAHPGQKQGDDEEDKIHVSQMITNMFSKIGSNDLTSLKQY LDSGKTDIEENTNSIEYTYTVAPQIYSTKTDTVRQVHPDTSFSSLGFGSSSNTNSMMSSM MSTDVFYQMPQDTGLYEDQYDIKAGRWPKQYNECVLVLTKNGNINDFMLYTLGLRDYKEL DKMVEQFSRDEKVNVPDESRSYSYEELVGTTYKLVDAADYYVYDKTYHVYKDKTEDKKYM KQLVQNGEDVKIVGVVQPSSSATATMLKAGIGYPAELTMHVIEQAKNSEIVKKQLAKPNT DVFTGKSFTDKSSNAFDMNSLFTVDTQMLKQAFSFDQSKLNMDMSKLDLSGIKMDMSKLP QIDVQDILSSLDVQISQEQLQSLATALQTDFQKYMVEHALLDPTRMNEYFLAYLQSDSAQ ALIQKEMSTLLQQSGLTGQFEAQLQKQMQTIMTQYTSTLTAQLQKELSTQLQSQLGHLAS SMQDAIQIDASVFSKAIKMNMNEEELSELMMSLMTTEVSSYDGNLKNLGYADLDKPGGIS IYPKNFESKQKVIDVLDGYNANMEKVDEDKVISYTDYVGTLMSSVTDIINVISYVLIAFV AISLVVSSIMIGVITYISVLERKKEIGILRAIGASKKNISQVFNAETFIIGLLAGLLGII ITLLLLIPGNMLIHHLAGNVEVSAALPLAGGVILIVLSVILTLIGGLIPSKKAAQEDPVT ALRTE >gi|312957266|gb|AENW01000005.1| GENE 130 135830 - 136534 563 234 aa, chain - ## HITS:1 COG:YPO3006 KEGG:ns NR:ns ## COG: YPO3006 COG1168 # Protein_GI_number: 16123185 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Yersinia pestis # 2 219 168 385 393 186 38.0 4e-47 MVLCNPHNPIGKLWSREELTQINALCRKHHVIVISDEIHCELCEPGKKYLPFASVNTSCL QNSITCLSASKAFNLAGLQAACVVIADEGIRNRIWRGFHTDEVAEPNVFACEASIAAWIE GKDWLKDLNHYISANKKTAQHDLKTQLPELHAVESQATYLLWIDCHVLHPFVDQFCDYLH KEHGLLVSKGSAYGKSGEDFIRINIACPNALMRTGLKRLSKGYCAFTKQFLECR >gi|312957266|gb|AENW01000005.1| GENE 131 136587 - 136814 225 75 aa, chain - ## HITS:1 COG:no KEGG:lp_2889 NR:ns ## KEGG: lp_2889 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum # Pathway: not_defined # 1 75 1 75 288 95 57.0 4e-19 MDTIKQAYVTGERALFHASDVQVEDSTFAQGESPLKESRNIRLHNSIFKWKYPLWYSTNI ECSHTTLMETARSGI >gi|312957266|gb|AENW01000005.1| GENE 132 136855 - 137400 346 181 aa, chain - ## HITS:1 COG:MA0418 KEGG:ns NR:ns ## COG: MA0418 COG0655 # Protein_GI_number: 20089311 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Methanosarcina acetivorans str.C2A # 2 179 3 177 179 136 41.0 2e-32 MKNIIVISTSLRKNGNSERLADAFVKGAKEAGHMVEKCSLQGCAMHFCTGCMTCQHSRQG QCAMPDDADILIQKMAAADVIAFATPVYFYEMCGQMKTLLDRTNPLFPIPYKFKDIYLLT TAADSEQHAMDGVIKGLQGWIDCFEKSSLKAVVYGTSIDGMDAVLEHPEILNEAYEPGKK A >gi|312957266|gb|AENW01000005.1| GENE 133 137541 - 137777 114 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRKDIAAFFGILCYTLAVFASLYVYYTKTTMLYGTICETESKGYRKEAERKKHSLELRM PCDKSVYKEQASASAEPI >gi|312957266|gb|AENW01000005.1| GENE 134 137774 - 138133 133 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNMKEFCRQYAVTKDVIKAFLHAGLLKGFEDDLERDCLCCFAVQRLETCLCLHALGFDIQ TIKAYCSLAESEDDTRVLRKEMLQERRDQHLKNAHRIKKTLDCLDAVLQKLKSVTGGGT >gi|312957266|gb|AENW01000005.1| GENE 135 138164 - 138388 281 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKGIENTLWNMKECGCQEDIIREYEKLIESPHREEAVAMLEMYCKQLQEQIEKEYKAVD CMDYLIYEIENSET >gi|312957266|gb|AENW01000005.1| GENE 136 138691 - 139590 934 299 aa, chain + ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 289 1 286 291 236 42.0 3e-62 MELRVLHYFLTIAREQSISGAAEFLHISQPTLSRQMKDMEDELGKQLFVRSNRKITLTQE GRILRKRAEEILDLVKKTEDEITLQDNVTEGDLYIGAGETHAVSVLIHAVQQLQKQQFQL RLHISSGDTKDVLDDLDKGLIDFGLVFGIFDKSKYDYIELPCKDTYGILMRKDSELAEKD VIVPEDLWDKPLICSRNSKNNEDNIFQWLQKDPTQLNIIATFNLLYNGSVMVENGIGYSF ALDNIIHISDESSICFKPLEPPLRVGMTLIWKKYQIFSKASEKFLKQLQTVIANMEKDT >gi|312957266|gb|AENW01000005.1| GENE 137 139633 - 140364 471 243 aa, chain - ## HITS:1 COG:MA0413 KEGG:ns NR:ns ## COG: MA0413 COG4925 # Protein_GI_number: 20089306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 113 190 301 302 110 50.0 2e-24 MEIMIQDEHDTTVRFVLFSSPAAKSFYEQLPLRVNVEDYSDNEKIFHPLKELETQDTPQA VASSGTLAYYKPWNNIVLFYENGQPSDTLYALGEAVSGKDNIKRLQGMINITKYKNNTVS QKQKVKEEQRRVKALIGTKTFTLSLHDSESARAFLKRFPMTVTIQELNGNELFAYMDENL PTDAQRATKIHTGDVKMFGRDCPMLFYKDFATAYSYTSLGKVDDAEALAQAWKEGNKEVI FTY >gi|312957266|gb|AENW01000005.1| GENE 138 140523 - 141689 961 388 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 4 387 3 388 389 275 37.0 1e-73 MLGNFSYVNPTKLYFGEDALSHLHEELSNYGNRILLVYGGGSIKKNGVYDAVCEILQANG KEIYEDGGVMPNPTVEKLREGCDIARKNQVDFILAVGGGSVCDYAKAVSVSIHCEEDPWE KYYLRMEDVSCEIVPVGCILTMVGTGSEMNGGAVITNHEQKLKIGHVFGENVFPKFAILN PTYTYSLPKYQMVSGIYDIFNHICEQYFSGEDDNTSDYISEGLLRSILHSSYAAIKNPQD YEARSNIMWTATWALNTLIAKGKTTDWMVHMLGQAVGACTDATHGMTLAAVSMAYYRFLC PYGLSKFVRFAQNVWNVNPHGKTPVEIAAEGLDRMEQWMKDLGLIMHLTELGVREDMMQD LVDATLLMEGGYKILNRDEILQIFKESM >gi|312957266|gb|AENW01000005.1| GENE 139 142486 - 142971 116 161 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1157 NR:ns ## KEGG: EUBREC_1157 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 2 158 1 156 158 124 43.0 1e-27 MVQLGNLYFIKQSFFDLVQDKTLPINKPDDENGKHGRPAFCAIKIDQGDYYWVIPFSHQI EKYQKIYDKNIQKYGRCDTIEFGYVLGEKKAFLLQNMFPVTEQYFKEIYIDKNTKKPIEL SNKVKHNLKSKANKLISLYSRKGIKLMFTDVDKILQTLKII >gi|312957266|gb|AENW01000005.1| GENE 140 143321 - 143578 125 85 aa, chain - ## HITS:1 COG:no KEGG:Tmz1t_0482 NR:ns ## KEGG: Tmz1t_0482 # Name: not_defined # Def: protein of unknown function DUF87 # Organism: Thauera # Pathway: not_defined # 7 74 483 548 577 74 57.0 1e-12 MSYIMNSKFIILRLTNECDKGVIKNLLSDSLKSTFEHLPLLDIGEVLVVGDAIVLPSKIK LDKPKDSHQPLSGTKDIGMKGYDKA >gi|312957266|gb|AENW01000005.1| GENE 141 143752 - 145383 2148 543 aa, chain - ## HITS:1 COG:BS_yloV KEGG:ns NR:ns ## COG: BS_yloV COG1461 # Protein_GI_number: 16078647 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Bacillus subtilis # 1 543 3 553 553 487 47.0 1e-137 METINGSLFKDMLASGANLLSNKFSEIDALNVFPVPDGDTGTNMSLTFNAGVQDALACPS DDVCEIAKVLSKGLLMGARGNSGVITSQIFRGLYQGVEGMKEINGFQLANALVQGSRVAY KAVMRPVEGTILTVVREAADYTYAYATSTQDVTVTQVMEKMVEESKESLIRTPELLPVLK EVGVVDSGGAGLVTIFEGFLSAMKGTVIQKEEAGEAIEGVQASMESEEFGYCTEFIIRLS ERGMKNFREDSLRDSLASIGNSIVCVQDDDIVKVHVHTLTPGDALNMGQRYGEFVKLKVE NMQEQHENIMMNAAVEKEEAPQQPKSKYAIITVAAGDGLKDMFTELRADYVISGGQTMNP STEDFVQAIDKVNAEHIFILPNNSNIVLAAQQAASVCEDQHVEVIPTKTIPQGLSACIMF NPEVDFDMNLSEMSDAIALVKTGQVTYAIKDTTFEGMEIREGDYMGILEKDIIVSNPDKL DTTRHLIDAMVDEESEIVTLIYGEDITEEEAQGIASYIEDKYDVEVEVNSGNQPVYSFIL GVE >gi|312957266|gb|AENW01000005.1| GENE 142 145394 - 145753 503 119 aa, chain - ## HITS:1 COG:BH2499 KEGG:ns NR:ns ## COG: BH2499 COG1302 # Protein_GI_number: 15615062 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 117 1 117 120 123 52.0 1e-28 MSISKSTQYGNIEISIDAIASLAGGVVTECYGVVGMASQKFLKDGIAELLKKENYAKGVV VRQKEDHLELDLYIVVSHGVKISEIVYEVQQRVKYMLEKSLELEFKKVNVYVQDVKVMK >gi|312957266|gb|AENW01000005.1| GENE 143 145832 - 146611 873 259 aa, chain - ## HITS:1 COG:lin2140 KEGG:ns NR:ns ## COG: lin2140 COG1589 # Protein_GI_number: 16801206 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Listeria innocua # 24 214 18 208 270 75 32.0 9e-14 MEDINDLLYDDVEAKYLALQNKKKNRRKKKRKKRLLILLVALALAALYFISDFSKVKSLD VRGNSFYTKQMVLQKAGLTYDSRYIVIPRFYLEWKLEKDDLIEAATVHKELDGAITIEVK EKSIVGYYIDNGKNYALVNDGSSLVIDSAMLDTIVNYPLVDGFTAAERKKLAKSFGGKQK VEDSIVQMISEMVPYETSYDKHMVKIIMQDGNTIFTSYESMPLLNDYLGTLKRLKKSNVC LWPDAATHSIHNENCSKKE >gi|312957266|gb|AENW01000005.1| GENE 144 146599 - 147501 996 300 aa, chain - ## HITS:1 COG:BS_murB KEGG:ns NR:ns ## COG: BS_murB COG0812 # Protein_GI_number: 16078587 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Bacillus subtilis # 4 294 7 297 303 216 38.0 4e-56 MNIEMKLQSYGDVECRVPLSKRTTFRIGGTCKYFIYPKNELCLLRILDILEEEGIPHRIF GKGSNILCSDDDYEGAILCLDRYFTDFFFEEEGSCLVQAGASIIMLAHEAMKKSFSGLEF ASGIPGTLGGAVFMNAGAYKSDISQILKEVYILKDRSIVVMRVEELEYAYRHSIFQSHRD WIILGARLQLQLGDQKEIRDLMDSRRKRRMDSQPLDKPCAGSMFRNPKDHQAWQLIEEIG MRGTRIGGAMVSEKHANFIVNEDHARAEDVVQLVEVIQKEVQDRFGVELITEVEKFNWKI >gi|312957266|gb|AENW01000005.1| GENE 145 147508 - 148581 1194 357 aa, chain - ## HITS:1 COG:BH2565 KEGG:ns NR:ns ## COG: BH2565 COG0707 # Protein_GI_number: 15615128 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus halodurans # 1 348 1 354 363 249 38.0 4e-66 MRMLIATGGTGGHIYPAMALADAAKERYGDIEILFVGNDDRMEASEVPSHGYAFQGLHAS GLTGNVFNKCRALLLMMNCYRKACRIIDEFKPDIAIGFGGYVSAPVMLAAHHKHVATMIH EQNSIVGVSNKMVAKYMDAIVICYEKCFEEFGREKTRLLGNPRATNAVHAKFDRDYFLSL GLSLHKPLILVVMGSLGSTSVNAIMKDALPAVSERYQILFVTGKNNYEEMRKQIHAPHVK VVDYVKQLDIMAHVDLIVCRAGATTAAEITALGTPSILVPSPYVAHNHQFYNASVLVDHK AAVMLEEKDLNAEALSNAIDRIMSDDLLRASMHSASLALGKPNASEDILNWCDEMKR >gi|312957266|gb|AENW01000005.1| GENE 146 148649 - 149731 1352 360 aa, chain - ## HITS:1 COG:BH2566 KEGG:ns NR:ns ## COG: BH2566 COG0772 # Protein_GI_number: 15615129 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus halodurans # 9 357 12 361 366 318 53.0 1e-86 MFSRKCRTLTVLILLLVVIGVIMVGSSSRVWASAKFNDASYFMSRQAVFALIGVFVMYVA SRISLTKLRRYGKKLFILCVIALILVLIPGLGIQRNGSRSWFGVGSFLIQPSEFFKIAII IYVADFLAKRYRIKTFKRDLLFPAFLVMLGFGLILLQPDFGSGMVMVCSIVVMVLAADSP LSYFVRVGMLGAAGLGGLIISAPYRLARITSFIDPWKDPLGAGFQIIQSLFAISPGGILG VGFDNSMQKHFYLPEPQTDFIFAIFAEEFGFIGCCILITLFLMVIYQGVKIAKNSSDPYL CYVAIGLISLFAIQVMINLGVVVGLFPVTGITLPFISYGGSSLVVMMGSMGLLMSIANES >gi|312957266|gb|AENW01000005.1| GENE 147 149784 - 150500 955 238 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0452 NR:ns ## KEGG: Cphy_0452 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 9 222 11 222 222 84 26.0 3e-15 MHMKSRIIGLLFLAVGIGYLGGAMDWWDFSIFFPGWWTLFLIIPAVFSFFEDGFHFGNGC VFILGVYLLCSANDWISIRLTWGMLVAIGLILLGCRMIIGDSFLRFKHSDSVLQEEDGRR DLRSATYFGNKRLNAHGIVYSLKAESVFGTQMIDLVDADLTECGYVKLEAVFGSIDLLVS DRIHYRVKSENVFGNTRVEHHPEGSQDLAVDVSCVFGTINLRKVHVEDDILNGKYREK >gi|312957266|gb|AENW01000005.1| GENE 148 150581 - 151354 972 257 aa, chain - ## HITS:1 COG:lin2285 KEGG:ns NR:ns ## COG: lin2285 COG4509 # Protein_GI_number: 16801349 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 7 249 2 244 246 155 37.0 9e-38 MKKPMSKTKKIIYDILFVIALAVFLFSAYKLISIYYLNYQEGKEKDAVQEVAKVPKNPEK EDFTIDWKALKEKNPEVVGWILIPDTDISYPIVQGSDNSYYLNHTFEKKENYAGAIFMDA GADASFQDRNTIIYGHNVKHGTMFAELEKFKEQAFFEQHPYLYIFTEQQNYRCEIFSMYS TSATSASYRLQYADDADFKSYVDMVRELSDFNRKVSVKGQDRIVSLSTCSYERDGQPSEL RYLLHARLVKWDGALKK >gi|312957266|gb|AENW01000005.1| GENE 149 151491 - 151760 372 89 aa, chain + ## HITS:1 COG:BS_yvbA KEGG:ns NR:ns ## COG: BS_yvbA COG0640 # Protein_GI_number: 16080432 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 7 81 5 79 90 92 53.0 2e-19 MGFQETFKALSDPTRREIVNLLKDGKRSAGDIVSHFSSTNATISHHLSILRKAGLITDEK QGKYIYYELNTSVIDEIIGWITSLKGEEQ >gi|312957266|gb|AENW01000005.1| GENE 150 151757 - 152410 536 217 aa, chain + ## HITS:1 COG:MA3135 KEGG:ns NR:ns ## COG: MA3135 COG5658 # Protein_GI_number: 20091953 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Methanosarcina acetivorans str.C2A # 1 181 8 188 227 102 31.0 7e-22 MKKQTLSIAFLILITFLFCLVILPFLPAQIPIHWNAEGVIDNWCDKLFLFLFPVLQLVIT VGFQFVRSTDPRRKNVERFVSTCNVFLMVLCLLIFGMCLITAISAWKPDALDVPMAITLG LGFLFAVMGNLMPKIRQNYFIGIKTPWALEDEDNWRRTHRMAGRLWFAAGLLMMLLSVLP KEILTGSILGLASAMALVPYIYSYSLFRSKRMKGENK >gi|312957266|gb|AENW01000005.1| GENE 151 152407 - 153132 301 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 4 211 7 214 311 120 31 5e-26 MIEIKHVTKIYGGTHKAVDDISLTIPTGEIIGFIGPNGAGKTTTIKMITGVLNPDEGEIL INGKNIVKEPLEAKKEFGIVPDNADIFLRLKGLEYLNFMGDIYEVDSEQRKQRITSLAET FEMKDALNDRILSYSHGMRQKIVIMGVLLSDPNVWILDEPMTGLDPQSSYSLKEMMKEHA RKGNTVFFSTHVLEVAERLCDKVAIINRGRIVFFGTLEELKQLHPQCDSLEALFMEVIAH A >gi|312957266|gb|AENW01000005.1| GENE 152 153125 - 154771 1634 548 aa, chain + ## HITS:1 COG:no KEGG:CKR_2509 NR:ns ## KEGG: CKR_2509 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 1 500 11 523 571 249 35.0 2e-64 MRKYLSLTRVLLKNSMGMMSDGKSKKALNVFIYGVLAVCMIPLGFTLYMMFNTAMAQLQP LQQEGAVLALGFHISSLVTFLFSIFLIPSIFYFSKDSETLLALPLPPQTILSAKFSVCLV YEYAFTLIVCVPLYIAYANNAAIGIPYILLALAIFITLPIYPLVLSSIITMLLMRFVPFF KNRDRFNMIAGILSIILAFGFSFAMNSGTIAEDPNALISMLTQGNNSMISLFSKIFPAIP FAAEALISSDALQLVYYILITCAALAVLVILGKWLYFKGAIGFSETKSSRKELSAKDFAR VSRHSKVRTYLIKELRLLIRTPVYAINCIGMCVLMPIMLLVIFITADADVLLQQLPDITP YLDGMLPYAVLAGMASGFLFSNLNMISSTAISREGTNISFMKYIPMSLKQQLQAKVLSGI LMSVISMLLTMVCVYFLLPIFPLTWYFAAAAASLITIVLGNYASLALDILHPKLVWEQEA AAVKQNMSGIVSMLAGMAMTVVTCVLLFILPDDYLLFGTAGMVIVCIAVDVVFYMRLDSF AQKRFHQL >gi|312957266|gb|AENW01000005.1| GENE 153 154784 - 155344 692 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400983|ref|ZP_06645128.1| ## NR: gi|293400983|ref|ZP_06645128.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 183 1 183 185 159 48.0 6e-38 MKRILIYFGDEQQKQPIVEQVLKDMHADYRILQDADLNQCVANLMGLPGFDEIPDAKPAH HSIDLMLFEDASDEEIQKVNECLQAKGTAMQRKAMLTKHNKDWTFHDLLSEIEREHTYFQ TMDAIRTLLVQSSELVIEAYTPASWKSYEQAFYQAYECMNRECSMKELNGAYEALSSAKK LLEPAE >gi|312957266|gb|AENW01000005.1| GENE 154 155554 - 155727 82 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MICIILIRISRIYMPVINYRDLKSREGYIGILGYTIGLDTAWMILLLYIEFAWIYKR >gi|312957266|gb|AENW01000005.1| GENE 155 155944 - 157809 2231 621 aa, chain - ## HITS:1 COG:lin0617 KEGG:ns NR:ns ## COG: lin0617 COG1132 # Protein_GI_number: 16799692 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Listeria innocua # 27 618 17 599 605 617 53.0 1e-176 MSKENRSSHAAKRGPMGHRGPGAPTEKAKNFKGTMKQLIAYMRPYYLNIIVSMLFAVLSV VFMVVGPKILGRATTELVSGFTAKIYGTGSINFDRIAEILLFLIAIYLISTLCNFIQNWM MAGVAQKVSFNLRKTMAAKIDILPFSYFDKQSHGEVLSRFSNDIDTVQQTLSQSLAQMIT SIVQIIGFLVMMLSISWQMTLMALVVIPLSLFLVTTVVKHSQKYFAKQQRSLGNVNGHIE EMYSGHIVMKAFNGEEKSIAQFAEYNDELYDSAWKSQFLSGLMQPIAMFVGNIGYVGVCI LGGWLAMNGVIEIGDIQSFIIYVRNFNNPISQVAQTMNVLQSTAAAAERVFEFLSEEEEV KETTQPVEVFDANGKTSIKGQVTFENVHFGYTPDKIVINDFSMYIKPGKKIAIVGPTGAG KTTIVKLLMRFYELNSGSIYIDGIKTTDMRRSDLRSLFGMVLQDAWLFNGTVMENLRYGR LNATDEEVMAAADAAYVDHFIRTLDHGYDTMINEESNNISQGQKQLLTIARAFLADPKVL ILDEATSSVDTRTEVLIQKGMEKLMENRTSFVIAHRLSTIRDADLILVMKDGDIVEAGNH EDLMKADGFYTKLYNSQFEEV >gi|312957266|gb|AENW01000005.1| GENE 156 157802 - 160075 231 757 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 512 737 132 354 398 93 29 6e-18 MTKLGKYLKPFALSILAIVALLFTQAMCELAMPDYMSSIVDVGIVSGGVEDGVPSVIRES EVKKLVLFMDKKEQKVFTDNYTRLISEEATDDQLDAYPILKKENVYELKDVDSATRDTIK ESLRKAETTVMGLEQSAAEAKSGKSSSSRELSDEQKKMMKLLSSLPKGMDIFTVLETMPS KQLMDMKQEMNKVTDAMGAETADTANAAYVRNEYKAIGVDVDAIQYTYLFQHGFMMLAVA LGSAAAAVAVGFLAARIAAGVSRNLRKDVFNKVEHFSSAEFNKFSTNTLITRTTNDIQQI QMALVMILRIVIYAPIIGIGAVIKVVNTNVSMTWIIALVVVLILSIMMVAFAFVMPKFKM LQKLMDKLNSVVREILDGMPVIRAFNNQKCESEKFAKANGDILKTNLFTTRAMACLMPLV MLIMNCASILIVWIGSHQIDSGALQVGDMMAFIQYAIQIIMAFMMITMISIMLPRASAAA QRAMEVLHTEPSICDPLTAEHFDEAKHGCIEFHHVSFRYPGAEEDVLHDISFTAQPGETT AFIGSTGSGKSTIINLVPRFFDVTEGSILVDGVDVRRVSQHDLREKIGYVPQKGSLFTGT IASNLQYAKEDATTADMEEAASIAQALDFIDEKQERFDAPIAQGGTNVSGGQRQRLSIAR ALVKKPEIYIFDDTFSALDFKTDARLRKALNELCQETRSTVLLVAQRISSIMHAQRIVVL DKGQVAGIGTHEELMKSCDVYKEIAYSQLSKEELENE >gi|312957266|gb|AENW01000005.1| GENE 157 160072 - 160536 665 154 aa, chain - ## HITS:1 COG:no KEGG:TherJR_2682 NR:ns ## KEGG: TherJR_2682 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: Thermincola_JR # Pathway: not_defined # 47 150 49 152 152 67 33.0 2e-10 MDEMDIVRKVTHLFYMFRRDNLLKKDDHPKMKHRDIMVLDAIMKLNDGNLVKMSELSDYF QVTPAAISQIIKQFEKKGWVDRILLDTDRRSVYIQVSEDARRMMKNCEAFMTERLVEFIE ELGEEDANAFVRILEKALAYSQKRKEKLEEGEQK >gi|312957266|gb|AENW01000005.1| GENE 158 160711 - 161976 1412 421 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400988|ref|ZP_06645133.1| ## NR: gi|293400988|ref|ZP_06645133.1| putative immunity protein BlpX [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 421 1 417 425 434 51.0 1e-120 MWKYQCKKHLVVLLVSFAAGAVLFGFMGYQREYIVSLMQQSIPAEMAGELVKADYMYYLI GGLTISGLANGVMLLSYAMQRFNVPFILIMVLFFMGGFTIVELIGTITVLPALVVCLYGM LSIPNRGRRREFAKENVTSVAEVERVYRLHHAYLSEYEALGKKAWSFNLKMNLLYFTGLI AVLLVILYVENFIAVFAAMMMYSILFFQLTKRKNMSMQPIISLLYDQCNPEACATAIFAY AKKGKRKKNFPMPQHLAQCMVYLNDPHLAIDVLATSAQGRGNFIFAYHSLMAYAYYQLGD RSMVKYHYDECEKAGARVNNGPMQMIKTQCLEGIQNKLDLMDQNFSSSRSFFEKAMPTAG FEFQRVDFKYYLGLIAFVEKDLEEAKSCFRYVCAHGNKIYYVEKAQSFLKTIEQAEAAVQ E >gi|312957266|gb|AENW01000005.1| GENE 159 162315 - 162890 133 191 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915856|ref|ZP_02078064.1| ## NR: gi|160915856|ref|ZP_02078064.1| hypothetical protein EUBDOL_01878 [Eubacterium dolichum DSM 3991] # 39 175 39 174 181 79 32.0 1e-13 MKFFLYFLTIAFGIVCFVIMKKKRYKVMPLICLIMFICFIGFGIISLVYSFVPYGEIFVM PLGSIVFGLISILVGVNDLYSLLCCRKKVDGVYCGYNTYYGGNGISTQAPVFEYTYNGTY YREQTTQNISHKRLNKGMTQGKMYSIYIDPKHPAVFVLTKRIRIGTIVAIILGLFLFTGG IDFFLPMLSGR >gi|312957266|gb|AENW01000005.1| GENE 160 162916 - 163659 362 247 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154503337|ref|ZP_02040397.1| ## NR: gi|154503337|ref|ZP_02040397.1| hypothetical protein RUMGNA_01161 [Ruminococcus gnavus ATCC 29149] # 1 242 1 242 245 326 88.0 8e-88 MRYKKIVLSIIASVLCLGLLNGCSCYSHDFNSSEEAQKYILSKLKGKYNEEFIITEVKEY KEEKIGLNWIRANVSSKENSSQIATVYARNTGFFEDSYHVYYYSDEIEELATPLFQDKPF IRNYQLEVQGHTTTTEWNGKESVEEYLKKREYEIETSIYLNEGKTDEEYAEEISYIMQEI IESDLVFNISVYTNDDNIIFYSLPEQHSQPDVEAILEKMEDVKRQQETKKDYKEWKKQNQ NNETNSD >gi|312957266|gb|AENW01000005.1| GENE 161 163722 - 164324 303 200 aa, chain - ## HITS:1 COG:lin0382 KEGG:ns NR:ns ## COG: lin0382 COG3340 # Protein_GI_number: 16799459 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Listeria innocua # 3 192 4 197 209 160 43.0 1e-39 MKLFLCSHFSSVGSLIKEEIENKKVAFIPTASLREGYIGYVGSARKLFKKLGAIVTEIDI STEAYSTIQSVFEEADVIYFTGGNSFFLMDQLRKTGADGLLKKELANGKLMIGESAGAII CAPSIQYIEQMDEKPEDYSQEDDAGLDLIDFYVLPHYLTAPFKKVTEKIMTEFSDLNLCP INNRQGIVIDGEGSKVICKD >gi|312957266|gb|AENW01000005.1| GENE 162 164380 - 165153 32 257 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1563 NR:ns ## KEGG: Lebu_1563 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 1 257 1 251 251 215 45.0 1e-54 MNGQMFQIASIVATSKKALQLSEPIRFSQLEYENKIEFIFLPQKKFLRTEKYTASNVSLW FEQIKKSGIQDIKLLCPYSVKDRQFLGFSNTTESSILCFYKSGKVTYFTADWQFDSMQKK WNILYSEHEWTNPPSKKPYFENNINSFRDVLLSIKELAKKIECENFANIFTSAINLLDGY SEYPDEKYGLSLPPIPQQNLQMFEAASISDVFGAMGSWNDSPAYMAHKKGLSEEYETLSS ELLKNVRLAILYAINEW >gi|312957266|gb|AENW01000005.1| GENE 163 165434 - 166105 401 223 aa, chain - ## HITS:1 COG:no KEGG:Dred_0903 NR:ns ## KEGG: Dred_0903 # Name: not_defined # Def: helix-turn-helix domain-containing protein # Organism: D.reducens # Pathway: not_defined # 11 73 74 136 255 64 49.0 4e-09 MEHYEKKISFLGENIQTIRKHRGMKQQELADKIGINMQSLSKIERGVNYPTFDTLEKIMD VLGVTPNELLSGEWKYIDHTEPYIMDIIKREQDFNVSLDYLSENEFFDDENEYKFYMETI LIRYISNYLSNEVVEVEELMEIKQLIQRQKIERMMKVHKEMRGLDRYREQPKEYKYHNPY DDWIFRQLADVDNRKNIPNTSPQVDFNEGDYEDYLKAKWNRGL >gi|312957266|gb|AENW01000005.1| GENE 164 166228 - 166467 95 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRAVLHIRPLRTPKGVPFPKGTVCPNTSGGRAPSSQPLLETTIFGLTVHAYSCYQSENI SSLCLLKRVIDPSVLNHSI >gi|312957266|gb|AENW01000005.1| GENE 165 166643 - 167653 481 336 aa, chain + ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 49 265 90 300 352 115 35.0 1e-25 MHILGLPTDIFNVYPASIKYKTYQARWQIGDIYVSGDARKTEDNPQGLGCYLVMTGRGCD DIFRILDSRNYTFGDMFRRCERRYGRDNFHFTRLDIAIDDKNEKPFFTIEQIKKKCEKEE FISNSEGYHFDESKFDDFDTAKTVYIGAGKSGLSYRFYDKDKEVCSKHNKTLDEVGSWKR TEMQLRDDKAHAFAMTFKERPLELGELAFGLLANNLRFVVPNRNESNKSRWKTCRFWERF LGAVEVLKLQVPKQQNSLEETQQWLTEGGVISAVKSFYFLEEHDALGGLEKVGTMLDKAR YSNSLSSKLTAHLQRINRTDLIPYIQYDTKHGKGGI >gi|312957266|gb|AENW01000005.1| GENE 166 167653 - 167856 207 67 aa, chain + ## HITS:1 COG:no KEGG:SMU.1031 NR:ns ## KEGG: SMU.1031 # Name: xis # Def: putative transposon excisionase; Tn916 ORF1-like # Organism: S.mutans # Pathway: not_defined # 1 67 1 67 67 104 83.0 1e-21 MNNNDIPVWEKYTLTIEEASKYFRIGENKLRRLAEENKDAGWLIMNGNRIQIKRRQFEQV IDKLDAI >gi|312957266|gb|AENW01000005.1| GENE 167 167935 - 169128 555 397 aa, chain + ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 92 392 79 377 387 84 27.0 4e-16 MKEKRRDNKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSL RELEQQIRRDIEDGIDSTGKKMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGA RSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFYIAIQDDCVRKNPFDFKLSEV LENDTKEKVALTEEQEQALLSFIKTDNVYHKHYDDVLILLKTGLRISELCGLTVADIDFK NEVVIIDHQLLKSKEQGYYIETPKTKSGIRQVPLSRETIQAFQRVMKKRPKAEPFVIDGQ SNFLFVNHKGKPKVAIDYNALFVRMVKKYNKHHKDNPLPHITPHTLRHTFCTRLASKNMN PKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA >gi|312957266|gb|AENW01000005.1| GENE 168 169306 - 170868 1874 520 aa, chain - ## HITS:1 COG:no KEGG:Ccel_1181 NR:ns ## KEGG: Ccel_1181 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 67 517 60 516 518 160 27.0 1e-37 MSILYKLYLTRMKANIRHVFSRKGSAIFAILMMLLYGGLIVMSLSKPEIALSMQNITDAN MAIMIGVGFTALMVGVMLLQKRKALFMEADAFYLFSGPFTRVQTMRFLMLQNIASAFLCG AVSLLMVILLGSTIELSFPFLLIAFLCFSFVYFVFLVVYYYVYLLSIQKDSYRHIPAIAA LLYVLMVAAVYGMVVLQNDFALTGSGTLFLNTELFYWVPLFGWIKMILVSYIASSWGLML LGIGLLLISCMAAYLLLCGYKGDFVERAMQDAQEFTALYKDVRAGKRDGMSDRKIHEVKA SFRSGAMAIFSKNVLLLRKSNDYIRWTDVMTIGIYLVITLIMDMGFGFFMYMMMFWLFTI VQNSDFMKDMNNYQIYLIPDHPLKKLLCVLLPTFLKMLLPMSAAILVAALLYQIDIASVL QYFIMLLGYATLFLSASVLSVRILKSRNNAIMENMLRMLIMVAAAAPGIGLTIFFLSRGE FTLELLQQLTMISLAMNFVISVIIVLVCAPMMNGREIKSE >gi|312957266|gb|AENW01000005.1| GENE 169 170852 - 171562 272 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 2 228 12 244 318 109 31 1e-22 MIEVKNLTKLYGKFKAVDDVSLCAADGEVTILLGPNGAGKSTTIKSITNLLQYKGDIKIN GVANSSLDAKKGFGYIPEAPVLYDLLTIDEHVEFIGKAYRCENYRALADEYIALFKLEDK RKKAVRELSKGMKQKVSMLLALIISPKTLLVDEPMVGLDPASIEETLQLFVRLKQQGVAI LISTHIIDVIEAIWDSAYIMDHGRIVAHVRKEELKDKSIKEIFFASVEGDEHEHTV >gi|312957266|gb|AENW01000005.1| GENE 170 171559 - 172293 796 244 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3165 NR:ns ## KEGG: Cphy_3165 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 176 1 179 182 115 35.0 2e-24 MKDRKRVMCGGLAFSDCEDMEMLHQYAKEGWVFEKFRGMCYILQKQEPVNRIFSYDMQKL KEDEKEAYFQLFENSGWHIINPEGKDVYFFWAEEGCVPLHSEVETRMEGYRSTLHIFAGA LVIGCLCLLSLLWIESSVVSMILLMTGSILGAVGLLMVVGIMLRMKRRRLRIVNLTFRKG AVLFVSGAGMLFASGFDWAADIHSLLLILGTVCTIEGFLWMCFQYRQFRDKKEIQIKKKD EGVL >gi|312957266|gb|AENW01000005.1| GENE 171 172283 - 172621 456 112 aa, chain - ## HITS:1 COG:lin1176 KEGG:ns NR:ns ## COG: lin1176 COG1695 # Protein_GI_number: 16800245 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 12 93 12 92 103 57 40.0 9e-09 MSKSNTMESAQLTDAMYYILLSLMIERHGYAIMKYIEELSNQSITMGPGTLYTLLKKLCR AEWILQTSVTADRTKKYQITDTGRQVLLHEVARRKRMVEDGLRILEENGYEG >gi|312957266|gb|AENW01000005.1| GENE 172 173312 - 173851 622 179 aa, chain - ## HITS:1 COG:CAC0687 KEGG:ns NR:ns ## COG: CAC0687 COG1045 # Protein_GI_number: 15893975 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Clostridium acetobutylicum # 4 174 1 176 186 215 60.0 3e-56 MFRVLKDINHNLNRSLQNDPAAHSKLEILLLYPHIRALAFHRVSHFLYKHHLFFLARLNS NIARHWTGIEIHPGATIGRGLLIDHGMGVVIGETAVIGDDCQLYHGVTLGGTGKQHAKRH PTLGDRVMIGAGAKCLGNITIHDDAKVGANAVVISDVPAGSTFIGLAAKDKREKHCIFY >gi|312957266|gb|AENW01000005.1| GENE 173 173853 - 174737 608 294 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 6 289 9 300 308 238 44 1e-61 MKETVKLIGNTPLYHIEDTNIYVKLEKYNIGGSIKDRAVLGMLDAAMNKGEIRQDTVLVE ATSGNTGVALAMLGAVYHIPVIIIMPETMSMERRQLVKAYGATLVLTPGEKGMQGAMDEM ERLMKENTNYRSLSQFDNPDNPNAHYETTGKEILDQLQDVDIFVACIGTGGTFSGVAKRL KEYNPAILCMAGEPEKSAVLSGRQAGPHKIQGIGANFVPANFDRELADDILLISDREAVF ETVRFAKETGILVGISSGANIALAKRLSLRYPGKKIVTVAPDGGEKYLSVLDFD >gi|312957266|gb|AENW01000005.1| GENE 174 175198 - 176160 979 320 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914731|ref|ZP_02076945.1| ## NR: gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 [Eubacterium dolichum DSM 3991] # 11 316 11 317 317 194 37.0 5e-48 MEKEYAKDYPIPFHNDVFFKYMLIGDDAGSALLRSRIIEEIYGLKVHETKVLNPELLPEA FFGKRAVLDVVLEDEAGHFYDLEMQVSGYTQKEQLRFQQYGYRLVGRQLKQGDEYTELKP FYQIIFMNDKPRDGGRMIRHYKVKDEDNQEEPNGTLNRAIVFLPMIKQRVKEVGGVENLT EFETFCYVLAYNPDDAILNMKRRMVNVVMEKYNEMREDGSLFSWAESVEFAEQAVQANLE ERTAEAEKLGLEKGLKKGLEKGLVKGKRTMLKALLIHKYEIDDNWVNSLSDQQIDDAVIL ILKCDTYDDLKEKLKKNELK >gi|312957266|gb|AENW01000005.1| GENE 175 176267 - 176971 1049 234 aa, chain - ## HITS:1 COG:CAC2800 KEGG:ns NR:ns ## COG: CAC2800 COG3546 # Protein_GI_number: 15896055 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Clostridium acetobutylicum # 1 222 1 224 225 322 72.0 3e-88 MFEHKKKLLHPVKVERPNPQYAVLMQEQLGGCNGEVKAAMQYLSQSFRAKDPVFKDLFLD IGTEELSHMEMVAETINLLNGGDVDYKKVDAGEIETMVTFGLNPALVNSSGNPWTADYVT VTGDLAADLLADIASEQRAKVVYEYLYRQIDDKYVKETIMFLLEREEAHNALFCEALNKI TDDGSNKSFGMSEDSRLYFDLSKPGRYFDDPDPKAPKMANAKDSKSTKSKSKKK >gi|312957266|gb|AENW01000005.1| GENE 176 177029 - 177541 648 170 aa, chain - ## HITS:1 COG:MA1134 KEGG:ns NR:ns ## COG: MA1134 COG0663 # Protein_GI_number: 20090000 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Methanosarcina acetivorans str.C2A # 1 167 1 167 181 173 49.0 1e-43 MILPYRDKQPLIEESAYVSSNATVIGDVTLEKGSSVWFHSVVRGDKDHIHIGEDSNVQDN CTLHTDPKHLLQIGKRVTVGHNAVLHGCMIEDEVLIGMGAIVLNGAHIGRHSIIGAGALV KEGQQIPENSLAVGSPARIIRKCSEEQVKEILENAAHYAQLGSEYKEIDV >gi|312957266|gb|AENW01000005.1| GENE 177 177904 - 178086 231 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402223|ref|ZP_06646361.1| ## NR: gi|293402223|ref|ZP_06646361.1| hypothetical protein HMPREF0863_02502 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 60 1 59 63 72 63.0 6e-12 MNIADVIVIAVLLAILAVIVYATRPKKGKDSGCGSCHSDCSSCSAFSSLYEDYKKDQEQK >gi|312957266|gb|AENW01000005.1| GENE 178 178140 - 180155 2265 671 aa, chain - ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 670 3 674 709 563 43.0 1e-160 MKDVLIALAGNQNCGKTTLFNRLTGSNQHVGNFPGVTVEKKMGQIKSFKEAALVDLPGIY SLSPYTSEEVVTRDFILKDDPDLIINIVDATNIERNLYLSLQLMELQKPMVIALNMMDEV TASGNSIDVHTLSEHLRCPIVPISASKNEGIDELIRVVKKQIRSGKQAVNLDFCKGEVHR AIHSIAHIIEDHAKQAKVPMRFASTKLVEGDEPMQRELKLHQDDIDIIEKIVKSMEDALQ TDREAALADMRYSYIEELVADCVVKRHASSAQVRSEKIDGLLTHKYLGIPIFILIMLCIF YLTFGPIGGTMQTLLEDGIAVACDQMANLLASMQVSDWLQALIIDGICNGVGSVLSFLPV IVTLFFFLSLLEDSGYMARVAFVMDKLLRKIGLSGRSFVPMLIGFGCSVPAIMSARTLSS ERDRKMTIVVTPFMSCSAKLPIYGMITAAFFPEHTALILVSVYLIGILVAILSALLLKST MFKGDSVPFVMELPSYRIPSAKSVVLHMWEKAKDFLRKAFTIIFVASIVIWFLQSYDFSF TAVADSADSMLASIGTWISHMFAPLGFEDWRASTALVTGITAKESVVSTLSVLTQTNSDA GLSAALQTIFTPVSAFAYLCFTVLYMPCIAAFAATRRELGSIRQALGAVGYQTLVAYLVA FLVFQIGSMFF >gi|312957266|gb|AENW01000005.1| GENE 179 180152 - 180388 441 78 aa, chain - ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 4 75 80 151 152 76 51.0 1e-14 MTTLDNIKPGQGGIIRAVGGQGALRRRLLDMGLTPRTNVHVNKVAPMGDPMELNLRGYVL TLRLEDAAKIEVDTEGAK >gi|312957266|gb|AENW01000005.1| GENE 180 180786 - 182396 1698 536 aa, chain + ## HITS:1 COG:mll4839 KEGG:ns NR:ns ## COG: mll4839 COG2199 # Protein_GI_number: 13474053 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Mesorhizobium loti # 307 528 24 239 253 100 32.0 6e-21 MKRSLFKKHQLWYVAGFLIINLAACIIIGNHAYRQIQADMNAHALQSQEEVQSVMDDYRH SFQLFTTMLEREVEAEPKPAVIWKYLKKLDKQLQAIEGDTFDGLYMYYRNSYLYSWDTPF EQYEKSGYDATTCPWYRNAVDAKGEIVFTPPYMSFANHYILSTISQLQPDQKTVFAYDIK MGNIQKLIASLQAYDKEQLIIFDKKGTIIGSTEEDYLGGNLMQSTEENREQLTEANNKLK QADSSISKEDRKKLEDEASYAQAFYDFQNSFSTDFNSLLKDDGMQLVDYQNQKYFGLIQQ GNEFDYLILVPVYSMLSATLQIWLIPLLILEIILIYVLSQISRELKNRELKGAYVELGQT QKRLEIALQAAQKAAAIDELTGMMNMKSFRSTVKHHIQGMEEDENGILIMIDGDHFKSVN DQYGHSAGDEVIRLTAQMIVGRIRTVDYASRLHGDEFAIFVSNTRDYRVAEKIMEDINLS LAKEAQKRNMPAITLSSGAIIACPNDNYMELIKAADEALYRAKETHNGAFRQAEER >gi|312957266|gb|AENW01000005.1| GENE 181 182654 - 183250 668 198 aa, chain - ## HITS:1 COG:CAC0648 KEGG:ns NR:ns ## COG: CAC0648 COG2214 # Protein_GI_number: 15893936 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Clostridium acetobutylicum # 1 190 1 195 195 93 35.0 2e-19 MDDPFKILGVSRDASEDEIKRAYRQLAKKYHPDVNKEPYAEEKFKQIQNAYQQALDYKKN GGAFGQNFNGYQQNTYQQSFSNDYQAAVSYINMGRFQEAIQVLNSIQNRDASWYYLYAIS NYSIGNQIAAMEAAERACQMDPSNQQYRQLYAQMQSGRTRYQSMQSPFGGGGSNFCCQLI LCNMCLGGGCCPGIYLCR >gi|312957266|gb|AENW01000005.1| GENE 182 183243 - 184079 796 278 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_02032 NR:ns ## KEGG: EUBELI_02032 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 272 14 285 301 265 47.0 9e-70 MFGYVIVNKPELKIKDFDTYQSFYCGLCKALHEDFGRRGQLTLNFDLTFLAILLTALYEP EDQLVRERCVVHPMHRHVKRENAYLRYAADMTIILTYLKCEDDWKDEHRLQARSMLSLLK RPMKRMEEAYPHKIQAIREALQKTAELEKAQSRDLDRLSSLSGVMMAEIVTYRHDEWYDT LYRLGDYLGRFIYIMDAYDDVEDDRRKGQFNPFLEKSGQTDFDERVKVILELMISNSADA FEALPILRHADILRNILYAGVWTKYEMVRKKRTGEKDG >gi|312957266|gb|AENW01000005.1| GENE 183 184523 - 184786 226 87 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3131 NR:ns ## KEGG: Cphy_3131 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 82 5 86 87 122 64.0 4e-27 MRTVRLTVTKSACRSGYCKQGDSFVVKDLCPPLCHEFWNSIYPSVYALLNGALLDYGEQR ATQFDAKCPDGGRVCIHGELMEENRTE >gi|312957266|gb|AENW01000005.1| GENE 184 184884 - 185633 691 249 aa, chain - ## HITS:1 COG:cutCm KEGG:ns NR:ns ## COG: cutCm COG3142 # Protein_GI_number: 16132223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli K12 # 6 231 5 225 248 155 40.0 5e-38 MKIQTEICCGSYNDALQAEQGGALRIELNSALHMGGLTPSVSSLKLVKQHTQLSVMAMVR PRGGGFCYETADFAQLLDEAKEMLENGADGIVFGCLHADGTIDEQQSAQLVAMAHAAGKT AVFHRAFDCTPDPFAAIETLIALGVDRILTSGQQPKAMQALTLLRKLQNMYGSRIELLAG SGLHADNVQQFLVESGICQVHSSCKDWKKDVTTIRKSVSFSYAPQPHASDYEIVSAQRVR AFLAAVKSV >gi|312957266|gb|AENW01000005.1| GENE 185 185735 - 186511 656 258 aa, chain - ## HITS:1 COG:HI0984 KEGG:ns NR:ns ## COG: HI0984 COG3022 # Protein_GI_number: 16272922 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 1 246 15 268 272 127 31.0 2e-29 MMILIAPAKRMRPTIDFMDHKRMPCFLPESERLVTYLKTKKQEELKAMLNCSDAIAEWTY NSYQHMDVNVSCVPALLSFDGIQYSYMAPDLFSEEYFVYAERHLRILSGLYGILEPFDGV VPYRLELDSPFHTPFCTSLYDFWGSKPYQRLIEEDKQILDLSSKQYGRLIKRHLDPDVHL VSVYFLEEEEGRRREKGVYVKMARGEMVRWLAEQNIQQFEDVKRFCRLGYRFDAAVSDDK QYHFVRKADWKRSKYKAV >gi|312957266|gb|AENW01000005.1| GENE 186 186707 - 187036 374 109 aa, chain - ## HITS:1 COG:BH3851 KEGG:ns NR:ns ## COG: BH3851 COG0246 # Protein_GI_number: 15616413 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Bacillus halodurans # 3 99 2 98 374 92 45.0 2e-19 MRRAVHFGAGSIGRGFIGERLHASGYEVVFADVNEDLINMINEEQGYELQLINHDLQSLY IDHVRALSTLGDKEKLLWELAHCDLITTSVWPNNLPKIALSFCIFQTKY >gi|312957266|gb|AENW01000005.1| GENE 187 187239 - 188201 990 320 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914731|ref|ZP_02076945.1| ## NR: gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 [Eubacterium dolichum DSM 3991] # 11 316 11 317 317 201 39.0 4e-50 MEKEYAKDYPIPFHNDVFFKYMLIGDDVGSALLRSRIIEEIYGLKVHETKVLNPELLPEA FFGKRAVLDVVLEDEAGHFYDLEMQVSGYTQKEQLRFQQYGYRLVGRQLKQGDEYTELKP FYQIIFMNDKPKDGGRMIRHYKVKDEDNQEEPNGTLNRAIVFLPMIKQRVKEVGGVENLT EFETFCYVLAYNPDDAILNMKRRMVNVVMEKYNEMREDGSLFSWAESVEFAEQAVQANLE ERTAEAEKLGLEKGLKKGLEKGLVKGKRTMLKALLIHKYGIDADWVDTLSEQQLDDVVVQ ILDCATYDALKEKMEKNKSE >gi|312957266|gb|AENW01000005.1| GENE 188 188409 - 190967 1718 852 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 845 1 809 815 666 42 0.0 MNFDKMSEKLQEIIMQAVEICKSYQHTTVDTIQMLKAIFEHDVLDGLFKRLNIDKTRALT LIDQEMNRVATSSNVNPQLSNEVAQSFSRAEQWSAGIQETYLSVASVWIALMFNKSYISK QLVKEFHLNEKTCKDEELKRRGGKKMDSPNAEANLEALSKYGRNLVEDVKNGKIDPIIGR DDEIRRVIQILSRKTKNNPVLIGEPGVGKTAVVEGIAWRIMKGDVPQSLKEKKLIELDMG SLIAGAKYRGEFEERLKSILEEVKQAKGNIILFIDEIHNLVGAGKTEGSMDAGNMLKPML ARGELRCIGATTFNEYRQYIEKDAALERRFQRVMVQEPSVEDTISILRGLKDRFESYHGV KILDEAILAAATMSNRYITDRFLPDKAIDLIDEACATLRVEMESMPQELDELQRKIMQLQ IEETALKKEEDKKAKERLEDIRTELAQLQAEKDSLYTKWEDEKAELEESKDAKVRLEKAK LDLEQAQNEARYEDAAKLQYATIPHLEKLIREQSDKQKEDALIQETVNEELIAKIVSRWT GVEVSRLVESERQKLLHLKEALQKRVIGQDNALELVSDAILRSKAQIQDEHRPIGSFLFL GPTGVGKTEVAKALAEQLFDSESHIVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLSE AVRRNPYSIILFDEVEKAHPDVFNVLLQILDDGRITDSKGVTVDFKNTLLIMTSNLGSQF AFDGADRDTNYMNEVKKYFKPEFINRIDEIVVFNALNDDMLGKIAHKFMRELTQRLAHKD ITLQVSDAVYRAIATQGVDPLYGARPMKRYIQRNIETLIARRMIEGNAGKDDTIRVDVRD GEYTVEITHSEN >gi|312957266|gb|AENW01000005.1| GENE 189 191451 - 192092 920 213 aa, chain - ## HITS:1 COG:L150333 KEGG:ns NR:ns ## COG: L150333 COG0637 # Protein_GI_number: 15672725 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Lactococcus lactis # 3 213 4 214 222 131 37.0 1e-30 MIKAVIFDMDGVLVDSEPKNLEQLRGFYKSYGTEVDDAFMHSLVGSSYTYTYTESMRVMH MDWPMEKFKEKLDDYCKLHAFGYDEVLNPGVKETLIWLREHGYKTAVASSSAMHQIQTME NVCDLVGCFDELLSGEMFHESKPNPEIYLTAAKKLKVKPEECIAVEDSSYGIAAGNAAGM RVLAYADDRYGVDQSKAYARIHHMQEIKKYLND >gi|312957266|gb|AENW01000005.1| GENE 190 192070 - 192654 492 194 aa, chain - ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 1 185 3 188 188 140 41.0 2e-33 MKKVVEIVHDIMKSQLTENSICADFTMGQGYDTLFLAQQKNCSHIYAFDIQPQAYVQTRE KLESAQLEGKATLILDSHECCDIYIREPLDLGIFNFGYLPHGDPEIMTRRKTSLCAATKA LHLLKKHGILILVLYWGQACNREESEALLAWSAALQSRCFSVCRITMHNKQNCPDILVIS KEKEKVDYDQSRNI >gi|312957266|gb|AENW01000005.1| GENE 191 192711 - 194075 1222 454 aa, chain + ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 20 447 23 448 451 207 32.0 3e-53 MKTINDSQIQSVLQLFSTIHKEAWLVGGCVRDMLMGRELHDYDITTDATPYEVMALFQEK GYRVIPTGLKHGTVTVLVQDEPIEITTYRTESAYTNHRSPEAVRFTPDIDEDLKRRDFTM NAIAWHPKRGFHDPYHGQADIAKKTIRCVGKASERMQEDALRILRALRFHCTLHFTIEEE TVQAIRTHAHLLSYISRERIREEFNRILLQDYPDTLQLLKEMRVLDTIAAGYTKLMNKEQ NNPWHIYDVFTHTDVALNHTKGMALEGKLAIIFHDTGKPACETLDADGISHYYGHAQKSV ELARCWLKKLHYDNRTIQRVLRCIAYHDYNLTPKKSTLRRYLSKFDNQLEDALLALDVQL ADQLAKNPEPAANGVRIIRQCKELLLHMHAEEEPLSLQTLAVNGRDMMDFGLCGKQIGTA LHMLLDYAMQDPSRNTKKQLIEELNRKCQNLHNA >gi|312957266|gb|AENW01000005.1| GENE 192 194216 - 194524 403 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402200|ref|ZP_06646338.1| ## NR: gi|293402200|ref|ZP_06646338.1| hypothetical protein HMPREF0863_02479 [Erysipelotrichaceae bacterium 5_2_54FAA] # 4 102 3 101 107 86 48.0 5e-16 MSCGLQIHKQAVMIEYYLNQAVNKVRGQRNSSLADITMVYDQPIHLTAEILSELQDKVRN ETELKTIQDIKTKYCTYQGYILSQLDEEICEKLVDDLKRLSE >gi|312957266|gb|AENW01000005.1| GENE 193 194590 - 195162 975 190 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 129 1 129 176 102 45.0 4e-22 MTLLQLLFSFLQIGLLSIGGGYAALPIIQDQVVAMHGWLSMREFADILTISQMTPGPIAI NAASFVGTKIAGLPGALVASLGVVLPSFIIVLTLSFLYYKYRQLDAIQAVLKGLRPAVVA LIASAGVSLGIDAFWGGKAISLADVNLESVLLFALGFFLLRKYKKSPITVMLLCGVLAVG YGLLSGSLTF >gi|312957266|gb|AENW01000005.1| GENE 194 195159 - 195728 705 189 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 11 175 9 171 186 75 30.0 5e-14 MEKNAKMYGTLFSSVFMLSACTFGGGYVIVPLMRKKFVEDLHWIEEGEMMDLVAIAQSSP GAIAVNASISIGYRCAGIPGAIVAVIGTVLPPLVILTVISYCYEAFIQIRWIQVMLFGMQ AGVVATICDVVWTMGREVWSQPQKVYVLIMLAAFVCNVLFDVNLLIIIIVCGALGYLIER AIKKEGGLQ >gi|312957266|gb|AENW01000005.1| GENE 195 195828 - 196724 1010 298 aa, chain + ## HITS:1 COG:PA3398 KEGG:ns NR:ns ## COG: PA3398 COG0583 # Protein_GI_number: 15598594 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 294 4 296 308 158 31.0 1e-38 MTLRHLRIFVAVCTWGSITRAAEKLHMAQPSVSLAIRELEEYYQLQLFDRISRKLYLTGD GERFLKYASHITSLFDEMENSMEHWSDMESMSIGSSITIANSLLCECLHSYKLEYPKRQI QILIENSMILEESIVSNQLDLALIEGIPTHEHIQKLSFFKDELAVICAREHPLAEKQKLC LQDIAQEPFLLREKGSGTREILDSIMKVHDIQLHPIWESASTRALVKGVQFGFGISILPY QMVKAELEAGIVTRLYLSDVSFQRDYYIIYHANKHLHAGLMDFIATCRRVCAKIQAKE >gi|312957266|gb|AENW01000005.1| GENE 196 196868 - 197101 299 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKDALLDYIFDNCDAAYISDLRQKMIFQEYADMILEIEDTKFSVEEWNYVYRYLTGANAV FSAVAEVKEALRSWMQA Prediction of potential genes in microbial genomes Time: Sat May 14 01:28:30 2011 Seq name: gi|312957209|gb|AENW01000006.1| Clostridium sp. HGF2 contig00018, whole genome shotgun sequence Length of sequence - 56233 bp Number of predicted genes - 58, with homology - 24 Number of transcription units - 22, operones - 14 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 195 - 551 170 ## 2 1 Op 2 . - CDS 555 - 2648 353 ## COG0550 Topoisomerase IA 3 1 Op 3 . - CDS 2672 - 3094 237 ## 4 1 Op 4 . - CDS 3105 - 3542 149 ## - Prom 3608 - 3667 4.7 5 2 Op 1 . - CDS 3715 - 4311 31 ## Npun_F4273 opioid growth factor receptor (OGFr) region 6 2 Op 2 . - CDS 4323 - 4529 154 ## - Prom 4593 - 4652 4.5 7 3 Op 1 . - CDS 4690 - 4896 121 ## 8 3 Op 2 . - CDS 4920 - 6203 549 ## LCABL_06030 putative uncharacterized protein PBCN11 - Prom 6230 - 6289 4.1 9 4 Tu 1 . - CDS 6299 - 7975 669 ## COG3505 Type IV secretory pathway, VirD4 components 10 5 Tu 1 . - CDS 8465 - 8842 182 ## CD1105 putative DNA primase - Prom 8980 - 9039 4.9 11 6 Tu 1 . - CDS 9266 - 9739 298 ## - Term 9757 - 9794 9.1 12 7 Op 1 . - CDS 9796 - 10362 214 ## 13 7 Op 2 . - CDS 10380 - 10961 203 ## Cbei_3964 CHAP domain-containing protein - Term 11203 - 11276 4.2 14 8 Op 1 . - CDS 11281 - 13797 567 ## COG3451 Type IV secretory pathway, VirB4 components 15 8 Op 2 . - CDS 13800 - 14192 298 ## 16 8 Op 3 . - CDS 14199 - 15992 603 ## 17 8 Op 4 . - CDS 15997 - 16692 295 ## 18 8 Op 5 . - CDS 16752 - 17003 196 ## 19 8 Op 6 . - CDS 17025 - 17867 436 ## 20 8 Op 7 . - CDS 17887 - 18081 168 ## 21 8 Op 8 . - CDS 18105 - 18968 266 ## 22 8 Op 9 . - CDS 18983 - 23095 1938 ## COG4932 Predicted outer membrane protein - Term 23521 - 23562 6.8 23 9 Op 1 . - CDS 23567 - 24535 479 ## gi|293400872|ref|ZP_06645017.1| putative hybrid signal transduction histidine kinase M 24 9 Op 2 . - CDS 24571 - 25542 470 ## DEFDS_0289 hypothetical protein 25 9 Op 3 . - CDS 25545 - 25991 249 ## - Prom 26119 - 26178 7.7 - Term 26133 - 26177 -0.8 26 10 Op 1 . - CDS 26206 - 31449 1039 ## COG4646 DNA methylase 27 10 Op 2 . - CDS 31494 - 32297 144 ## - Prom 32331 - 32390 3.1 28 11 Op 1 . - CDS 32393 - 34540 394 ## SE1500 hypothetical protein 29 11 Op 2 . - CDS 34579 - 34911 148 ## - Prom 34932 - 34991 2.6 30 12 Op 1 . - CDS 34997 - 35614 346 ## 31 12 Op 2 . - CDS 35607 - 35969 221 ## - Prom 36105 - 36164 3.0 32 13 Op 1 . - CDS 36182 - 36646 78 ## gi|255280140|ref|ZP_05344695.1| conserved hypothetical protein 33 13 Op 2 . - CDS 36679 - 37437 415 ## gi|255505139|ref|ZP_05344699.3| conserved hypothetical protein 34 13 Op 3 . - CDS 37410 - 37919 77 ## COG0681 Signal peptidase I 35 13 Op 4 . - CDS 37970 - 38770 324 ## Clos_1848 hypothetical protein - Prom 38918 - 38977 6.5 - Term 38780 - 38836 10.2 36 14 Op 1 . - CDS 39028 - 39774 393 ## 37 14 Op 2 . - CDS 39797 - 40144 251 ## 38 14 Op 3 . - CDS 40223 - 41305 605 ## Clos_1919 zinc finger CHC2-family protein 39 14 Op 4 . - CDS 41315 - 41887 231 ## COG2003 DNA repair proteins 40 14 Op 5 . - CDS 41880 - 42017 208 ## 41 14 Op 6 . - CDS 41998 - 42228 234 ## 42 14 Op 7 . - CDS 42246 - 43088 321 ## 43 14 Op 8 . - CDS 43098 - 44267 232 ## 44 14 Op 9 . - CDS 44293 - 45726 492 ## ECO103_2812 hypothetical protein - Prom 45852 - 45911 5.3 45 15 Tu 1 . - CDS 46031 - 46486 347 ## - Prom 46641 - 46700 8.3 - Term 46513 - 46550 4.1 46 16 Op 1 . - CDS 46719 - 47135 231 ## - Prom 47164 - 47223 2.7 47 16 Op 2 . - CDS 47225 - 47572 226 ## 48 16 Op 3 . - CDS 47574 - 47864 119 ## - Prom 48091 - 48150 7.1 49 17 Tu 1 . - CDS 48513 - 48989 -42 ## Ppro_3817 radical SAM domain-containing protein - Prom 49200 - 49259 4.8 50 18 Tu 1 . - CDS 49412 - 49954 149 ## gi|260880943|ref|ZP_05893266.1| conserved hypothetical protein - Prom 50070 - 50129 3.3 51 19 Op 1 . - CDS 50791 - 51627 95 ## COG0338 Site-specific DNA methylase 52 19 Op 2 . - CDS 51638 - 53182 325 ## COG0270 Site-specific DNA methylase 53 19 Op 3 . - CDS 53172 - 53711 287 ## 54 19 Op 4 . - CDS 53728 - 53928 87 ## - Prom 54103 - 54162 4.4 - Term 54285 - 54320 -0.6 55 20 Tu 1 . - CDS 54389 - 55030 112 ## 56 21 Op 1 . - CDS 55114 - 55392 87 ## 57 21 Op 2 . - CDS 55444 - 55749 99 ## - Prom 55811 - 55870 5.8 58 22 Tu 1 . - CDS 55936 - 56232 59 ## Daci_4131 hypothetical protein Predicted protein(s) >gi|312957209|gb|AENW01000006.1| GENE 1 195 - 551 170 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVNKDEMKEMTLNEYAIHLYSESNLSEMEKVKKFAEKQWEEQMDCTEMDLIYLDHDGVS VVYPWTDDSGRFDVDPIKEYGVTAFYDFYSKIIQRMENIYLQDSELSESRDDEAEPDL >gi|312957209|gb|AENW01000006.1| GENE 2 555 - 2648 353 697 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 636 5 656 709 446 40.0 1e-125 MKLVIAEKPSVALELAKVIGATKRCNGYYIGNNYLVSWCIGHLVTLFNCEDYDPAWKQWK KETLPIIPEIFKLKPVKTTKEQFYILKKLMNSDDITSIIEATDAGREGELIFRHVYKLVG CKKPIQRLWINSYTDKDIYEGFQNLQLGVNFEGLYECAFARQQADWIIGINATRAYSIVY GSTLNIGRVQTPVLSMIVSREKDIQAFKKDYYYIAHLKYQNINAVTDKLSKHEAAAISSK IDGKTAYVYSNSIKIKNQNAPTLFDLTLLQKVANGRYGFTADKTLKITQYLYEHKLVTYP RTDSKFINASMKKDTFDLVCALLEIVESNGDDFIPNVDIIIDDDKVSDHHAILPTNNVLN QNENLNSDQKKILDLIIIRTLSAVAPKATFEVCDCIFICEDLQFKMQAKRVLEKGWLAYE NNAGTEEDEEALGDTANQDILFTLNEGEKLANVKGDWSEHETSAKKRYTEQTLLSAMETA GKDDFKKIEGAERCGLGTTATRAAIIEGLISHGYIIRKGKQLHPTEKAMMLIDILPAKLK SPTMTAEWEQQITDIKNGKESRQKFIQKIKQYAIQIVNDVTETAIDTVKFKTEKKIVGSC PMCDGKIIERKTDRGLSWYCSNYKDKNCTFRLYEKTKYFDNILEMTSNRVTDLLNDKKVL FVVKSKNGSIQKRYLKMKINGIYVNFECVGYPKSNKE >gi|312957209|gb|AENW01000006.1| GENE 3 2672 - 3094 237 140 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFISEKEMKEIFWKNYNRKGRALRYQFECPIREGAADLLTIECYQAEYQINGFEFKLTDI KKALLQAEANLPYVNKSWIVIPDEKEELIQNKYMLHLKEKKHIGVMCVSAGGKFKIIYQP RFKKEVIMNQIVFKLCMVEF >gi|312957209|gb|AENW01000006.1| GENE 4 3105 - 3542 149 145 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVDNTSKNAYIDGIKAGFLNVQWGYFREGVSEVSENKTINKMINDNLTKSIRITITKNN IWADNTHTTISYIRRLGSDVTVKDIPYYIVDVTASPIKIIGTVENIIFNEDCIIGAIKNS LRLHFLEKRQGRLHSWTIGDLEKQL >gi|312957209|gb|AENW01000006.1| GENE 5 3715 - 4311 31 198 aa, chain - ## HITS:1 COG:no KEGG:Npun_F4273 NR:ns ## KEGG: Npun_F4273 # Name: not_defined # Def: opioid growth factor receptor (OGFr) region # Organism: N.punctiforme # Pathway: not_defined # 29 186 2 166 174 127 42.0 2e-28 MLEKLISVIRQKITNDYCVINYHNVIHPIVLFQLNEGTDSKGRYLNDLWQEDFYFYESCH DYIQWMFPLAEESEYNPDAPVLTEEDIIFFQNNIIVQLNIRKSFRTILNFYGFEIYAEGI RKSESFERRKKIWLTRDNHNYLRLTRIMKCLCLLGMPEYTDALLTILLEIAKESDVPSIT LEKWKVLNHKGGEVENDK >gi|312957209|gb|AENW01000006.1| GENE 6 4323 - 4529 154 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNRKLDKEIEKLNRQKQTILEKEFVLKSEREQIDEKLKPLLKMREQEKEIENKMKELEEK ISNHLDKG >gi|312957209|gb|AENW01000006.1| GENE 7 4690 - 4896 121 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEKDIEDFKRFTFRWEVLRLKQNYEEQMIMLFEKNYDVLSCKEKKFLKERIKEKEKRIK IGGIVKSK >gi|312957209|gb|AENW01000006.1| GENE 8 4920 - 6203 549 427 aa, chain - ## HITS:1 COG:no KEGG:LCABL_06030 NR:ns ## KEGG: LCABL_06030 # Name: PBCN11 # Def: putative uncharacterized protein PBCN11 # Organism: L.casei_BL23 # Pathway: not_defined # 27 330 50 351 414 67 24.0 1e-09 MYLYYEREGACDKTKDYEPLNDMDTKDAFDYYHLRLGSTGGFDSNGDISAGKSIQLAEQY KPEIIYRWVISFDDQFAIENNLKNKKNIKELVRKTMDKNLRICGFDPENIIWSAYYHINT DNPHIHIPFYEMQPTRKRYEIPKNKISGVKSQIIRNLKLNTNLYIERDESKKSLIEAVRH LDFTDQMKKYLSHSYNLHKSKGDSKNNEEILKSLVKLNDVLPIQGSMKYNSANIKPYRAV IKDLVKVILDDHRISPFMQEYSNKLQEEVEQQQQIYGTGDKEYFDEDGNIRIGKKEGIKL QEKFLQQRIEEIETRVANMILQSILDYRKDVNDFLLEGDAVAAIDKQDGEDMDGSQAAEI IKGKKPTGRFRKKNLNTRSNALCYGAANVLSKAIEESYYAIAKQQEKARTATEKAKQEIK ANNVYER >gi|312957209|gb|AENW01000006.1| GENE 9 6299 - 7975 669 558 aa, chain - ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 1 367 180 529 591 94 23.0 8e-19 MLASMAGESMIFNDCKKEMYQDFHIYLEKKGYDVYCLDFRFAQYSDALNPIDDINYMFEI GNIDDADQYASDQVTSLVVDNGQSEPIWIDGQKALIKAMLLETANAPVSVEKKNYYSVLQ MLAVLGKEEKIDGKQQMLLSAYMDSLPETSPSRVSFTPINNSPEKTRGSFMTSALATLSP FSGIKIMKALSKSDFNFHDFTNGKKALFVVNPDEKTTYNAVTAMVFDNAYQSLIFEANKL PGRKLKKRVHMIFDEFGNMPKINNLETKITVALSRGIIYHLYLQDFKQMNEKYGENVAAI IRGNCNLKYFISSADYATCEEMSQTFGNETKWISSQGGNYNPNATVTGGNVNYNQQVRRL IDANELMNSDTLDGKDIKVHRTYLGPCKVYLPDCSEYAWYNEMEHDETEVVNEKLSLSYA IPRYIIINDNAILKNEILKGTDSDEGMSSSIEALFQSRTNGPGAKAKPGLLSKDMYWYWS TRSDIGTSVTNKVIKQIQRGFINKDAESIKAYMKSEEFLTWLHDLDDQAEESKKDTVNKK QVTFPKDDESNAFEDLFS >gi|312957209|gb|AENW01000006.1| GENE 10 8465 - 8842 182 125 aa, chain - ## HITS:1 COG:no KEGG:CD1105 NR:ns ## KEGG: CD1105 # Name: not_defined # Def: putative DNA primase # Organism: C.difficile # Pathway: not_defined # 21 91 1117 1182 1343 73 56.0 3e-12 MFSFNEYEKIQSSISIAELPYDKVYDAELTEDMSLEDMSLEDIFRIFNIDHPDDFKGHSL SVSDIVVLEQSGKKTAYYVEPIGFRDITNEFLCSRKLMDKAVDEITTLYEEDDESLEESE EMERE >gi|312957209|gb|AENW01000006.1| GENE 11 9266 - 9739 298 157 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLVVFCDKFLYKNLYDYFSFYNEAGELLGSYFDETASDLYHVVDADYINIAINAVDGLR DIFALMIQKSWYTNQECINICKLMKQLHPESKVIFFMDVPLKDYKYFMHRCATESLALLA TDPESLDDMFQKDLNIEQSQFVLKRVKRKEKKLFNVY >gi|312957209|gb|AENW01000006.1| GENE 12 9796 - 10362 214 188 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSETVYVEKDLIDNMREERDRRRWSQSKAAEILGISLSKYSRLETGRLRKIERSLLNKI VENMKLDRRFAYDANTEKKSYRLPADLVKDLQGLQKNLGFEHETDVVVYCLREYFDGFRL QQVQSTLEDFMKELIGATFIRAMKKMNREAEIGSAALELIEETTDINVESYKEKAEENMF KIPHAKAY >gi|312957209|gb|AENW01000006.1| GENE 13 10380 - 10961 203 193 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3964 NR:ns ## KEGG: Cbei_3964 # Name: not_defined # Def: CHAP domain-containing protein # Organism: C.beijerinckii # Pathway: not_defined # 52 143 33 127 311 91 44.0 1e-17 MVQYIKSKNEYKDVLSDYSDDELIEMIHTCKEIQDGKTESGGATGSIDIKADVESAPYQS ANPYTQSGLRGQCTWYAWGRAYETSGKSMPTGNAQNWYASTTLPKGKKPAPGAVVVLAGG AYGHVAFIEKYENGMITYSEGNYLNPHRNDSLMVSYAQSHYKELLHQDTVKDSEFKQVYL SMGLSIVGYIYTN >gi|312957209|gb|AENW01000006.1| GENE 14 11281 - 13797 567 838 aa, chain - ## HITS:1 COG:MYPU_3830 KEGG:ns NR:ns ## COG: MYPU_3830 COG3451 # Protein_GI_number: 15828854 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Mycoplasma pulmonis # 431 808 474 827 853 105 27.0 5e-22 MKGKKKEKKSNASKDNKKTEKKLIKRVNVKEALPFSFDKEKNMFVKKDGSYIQMVCITGT NLFGFKETDKASFINAFSLVFSNTIGKGQIYSYEISADVDGYIEDYQFFMDSLDLTNEIG CKKYDILERAQNRMKFTASTRELVDRCFLFVFADKDINRLEQRCNEVIQTMSPFQSTFML TWEEMFGVLYNFYRPSNARIFDEDPKEIEDIMDYLYPTRIGRVERGFKQCLETDGIYSRT RYISYYKKMPKFAQLSYLATYKEIDFSLHFEPAESGAISKEMDKELRNIRKNLEKAKEHS ESTKLQKKEAETEELIDSVVADGSLPYVFTVVVRIKSDSLDMIDKIAAEMDKDFLPDGIA FRDGVFEPMELFHMSAPICHNELPHYGKLTTSETLGFMYPFVFEALYDSTPMMKTEKDGY HSMSKRHYPPVYIGNTIQTNGVVFYDNFTKKDDRSNYNEFIAGNSGMGKTFFLMWLINTR YALGYKQYLIDVEGKELNKLTYALHGANINCADGSKGRINPMHIRLNIPDSDTGENKVPL KEIKPLAAHIRFLRAFFNAYKGNTTEIGLLNDNTIEQAIESVYSDYNITFDTDAQYIVDN FKNDDYPILMDVYNRLYKMLEEVRQDPKHDSKEITRIKECIAFLDPLARGADSDIFNGHT NIDLNNDLINFNIAALQDNTDSRVLKTQYYNILSFIWTDIISDTTNHRKQVYADEFSVIM DPRFMDIMLYFQTIAKRIRKYYGGLTTATQQINDVMKASVREQGEAIIENSVYKFFFSLG AAGIEYFNDTDLIPESEREFIKFAKLGQCYASFGTATNMRLKVQLDNQTLQEFEAMKA >gi|312957209|gb|AENW01000006.1| GENE 15 13800 - 14192 298 130 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLNVLTIIIDRASVKPILWWRFSGKDSLTMGAGFLIGFYPTKAVTDDLVGLIAGGVIFI LLGILLVEMPNHLSIYDHIKKWYKYKFKDPEAYYYIPQNLYDINQNQNEEDKDTPGNLYG FSFSNKQEED >gi|312957209|gb|AENW01000006.1| GENE 16 14199 - 15992 603 597 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNGMMIGWFWDDIAENLSHMVDDTIRNFFWSMIKALMTMISDLLNGLINGILGFDILNNT FIKEAFTCALLLMFLFFPVKIIYELVTGLIKDDEAALDMNKKLGSTLIGIAIAVSLPVLV PLANTTTVKVANVFTSGDVMGNQFETGKNKDSKIGKSLIENVFIGFGGMSKSGPYGAKKL VEKYRNASFSITQRDEDDDNYVWVYSDFMVVIGMSIFVILVFILSIQIAVRLFAIGFYYD IGPFCCLSLSNYQNPQAFTVWKNSLIGQFALNLTQLFLLSLLGNIVSDISEVGATYPIAC AAMFFGAFSLILTMPNFVQSMIGGYGAGVMETMQQMKGGLGMMRGMTIGAVTGGINAIAG RRNDFTGFRQGGIRGAIAGNKRSDGSRSGGIIGDTLGQKDSEGNRKGGMRSAFVGDKQTQ RDRAGNVSGTKRSGGLRGAVVGNTTKDTDGNVTGRQGGLRGYAAGNYQAVTSSDLDGSKN PEPQVATRRQGGLRGLAAGTVTKDINGNVMSREGGLGSRISGRFNVNNAAADSPGTSGNS VNSNNSGTGNNGTGRMNRGYNSSARHTRKTNTQSTENGRANPFKINNTNASDRKNKR >gi|312957209|gb|AENW01000006.1| GENE 17 15997 - 16692 295 231 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKEDLFSQFGKEYIKSLTEAYDIDEDHIIFKYAKKVTTKRFADSQDLEAFLNWMKQFNY DGTGMESYYVNLIRKYMIAKQDEEAKSWNLFTLEESESEDDDELLEEIHEQIMEIKDEMS SLIDIMIGDEQISDVYKKTCYIQEMLKGLQSKQTPKKAEYEQVEDLKKKFDILLLNTRQY SQRVKAIEKPIQAPFTKRCEDIFCKNKNKLIFYGFIFYTLILLVLLIKVGW >gi|312957209|gb|AENW01000006.1| GENE 18 16752 - 17003 196 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGQFSQLFNIFKPLVTDGMTFLQSMSVLIAGCMATWYKLREMVADVQEDQMFSQKNKKVF TCLIFIFIIPTIIKIVQSYVNKG >gi|312957209|gb|AENW01000006.1| GENE 19 17025 - 17867 436 280 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGFSIHKNLIQKDQEGNIKRTSITSKSGKEYTYATVSVPNANLGGIKSEDGIQINKTESV HFLVPIYSISEDQYHSDRSFITLKDDYIIPSVQVDMGKTGKQLENGKNEHQFLKVRNMTV EQLKECMPQNQWLRFTISREQKGNDYMNSKNEPRTTILMPDGAYKGCRIVINPKCISEIP EKDHLLSVSLNNKAEFNILSNSVKSIDPATGKKDYETKVVKEKVTAAELQEYFINRPKAD QEVSIVNEQHPVLPETDILTEEGADTIDENEESSEDGLVQ >gi|312957209|gb|AENW01000006.1| GENE 20 17887 - 18081 168 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSIFKIVMAVLAFLGSFAMGLFMPQKAIDEHFMQRDGKIGFKVYLLRFVLALVLAALVTF FVCL >gi|312957209|gb|AENW01000006.1| GENE 21 18105 - 18968 266 287 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRYIKRLCIPLSLLIVCGCTAKTPKRQHVLYFDQDIKIQYKSNVNTCDYIATVDSYEIQA SMIDDDTVYVSNFEVKCPKIDTNHLGETTLTYKIGNDTYKTKAMITDKTKPVISAKNELA FTIGDRHEAVRSYFKVSDPIDPVEDITVTLLGKINWQKAGSYKVTAIAKDKSGNESRKTI TFILKKPKKEESKSDSENGQEESKPKASISEKKEKKESDGDTGGEKINEKVDKPVISNKD YLFSDGFDMDSAASVCQADLLSSGKGGSCIPLKNAEGEYVGMRLTLY >gi|312957209|gb|AENW01000006.1| GENE 22 18983 - 23095 1938 1370 aa, chain - ## HITS:1 COG:lin2282 KEGG:ns NR:ns ## COG: lin2282 COG4932 # Protein_GI_number: 16801346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 154 783 1090 1636 1806 139 28.0 4e-32 MAYHGYYTHGKAMKWYMASQFMIWEDRGWKIDSTNLSDYATMKAQIQDAIDHHYDKPSFD GTTKTVNVGSSITLTDTNKVLSEFTLSDVKGVTITKSGDKVTITPTTSAPDSFKLTGNRY TDGKDEASIVYRTSGNSSQAVGDFGYSDPAFFNVTINVNKHGSLKIAKNDEDGTAVPNTS FKVSKNSDMSSPIGTYKTGADGTVTIDELLPDTYYVQETAVPNHLVLDTTVRTVSVEANK TATLTVQNNWVKGKIQLKKIDPQSKKQVAGATYAIYNDKGQELERLVTKATGYVESGYLR FGEYTVREVIAPSGYILNKTSYPVTIATNEQKITVTGEDERQTGRLEITKEDSVTGSAAQ GEATLKGAVYELKAKENILDPADGSVKYAKDAVVATLTTDANAKASVSDLYLGKYVLQEK TASTGYTLDATKYDISIAYAGQSVEVVTKKQTVKERVKAQAFSIIKISDNGSGEADKLAG VEFTVKSQKDIDAYGTWEKAPVAKNAQGKTAAILVTDNNGYAVSEELPYGQYVVRETKVP DDLYKVPDFKVTVSQDSRDPQPWRIFNDEKFRAVVKAVKVDQETGKTIALAGTTFKIKNL DKNEYVEYWEWSPVPHKVNTWTTDESGTVMTGKELDPGRYALEEISAPDGYILNVSPIEF RVSMNTAYETLPDGSTPVITVTKQNTSVKGRVNVSKEGEVLIKAEPDDNGNTKFKYENRK LKDAVFEVYADEDILSADNQGDVLYHKDDLVDTITTSADGEAQSKLLPLGKYRVSEKTAP SGFTHSNDIKKVELTYKDQNTAIVFGDAGTYENERQRVDVQAVKKDADDQQLLAGAEITL YANRDVYNYDGDVIVKAGEQIETVVTGEDGKATFTADLPNDLTPEYGVMPIEEIEDEDLD PGFGVNVIDGVRLIGDPNSLFYAGETKAPQGYASGQEVRYYFDTKYTDQDEAVLKFESEF QNESTKVEISKVDITNEKELPGATLQIKTEDGKIIEEWVSTDNPHMFEKLPVGKYVLSEK LPAAGYTTAEDIPFEIKDTGEIQKIIMKDDITKLQIIKTDEEGKLLPGNKLAIIDQNGKT VDEWITDDKPHDITKLIVGQEYILRELEAAAGYTKAADVAFTVRDTNEIQTVNMNNKQTV MHFSKVDETGEKELPGAKLQITDEDGNIIDQWTSTEEQHTITGLTEGQKYVMIEISAPYG YEIAEKIEFTAGDGQKVVMKDKMIRVSVVVNKVDSVTKENIKSKNFEFTMYKDAECTQKI ETVQADKEQGTATFANIPFGTVWIKETKAPLGYKLSKEIKEVVIDENTPIVDGVYSFEYV NVLMPTIVVKNEIKTGDTTSVALLFTVSGIAGFAAYLMIRKRRDLNRNDN >gi|312957209|gb|AENW01000006.1| GENE 23 23567 - 24535 479 322 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400872|ref|ZP_06645017.1| ## NR: gi|293400872|ref|ZP_06645017.1| putative hybrid signal transduction histidine kinase M [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 281 1 281 328 178 41.0 4e-43 MKKLLGIAALATLVLTGCSKDLQVQPVDKLTVEYGDKLDNSKLFNAKESDENVKVDKVNG FEEKKLGEQTLKVMFTDGDKTTEKEIKVIVKDTKKPEITLKKDKITITAGDKLTLKDNVK SVKDPVDGNLKYSDKELKKSGYYIDKGKMDTKKAGTYEVKVLAYDANGNAAEKSFKVIIK KKPVKKTTAAPSEHNATEESQSTNSVQQPQTTSPSGGSASNGSGASSTGSSSSNNNSGSQ GSTAPSKPTKPVACPTGDDPSLPCDSILPGQAVGSDGVYYTSHDEAWDVGMALGEAGKIP GFDCATVEVNDGSKRWILLYHQ >gi|312957209|gb|AENW01000006.1| GENE 24 24571 - 25542 470 323 aa, chain - ## HITS:1 COG:no KEGG:DEFDS_0289 NR:ns ## KEGG: DEFDS_0289 # Name: not_defined # Def: hypothetical protein # Organism: D.desulfuricans_SSM1 # Pathway: not_defined # 14 297 3 274 290 258 52.0 2e-67 MDKDNEKMDMTVVEDEIPLSQIQNLVYVIRGQQVMLDSDLAMLYQVETKQLNRAVKRNKQ RFPMNFCFQLTDNEYEVLRCQFGTSKINDGSDSEGRGGRRYLPYVFNEQGIAMLSAVLRS ETAIRVSIQIMTAFVEMRKFISSNALLFERISEVELKQIDYQKKSEEKFEQLFDYLSEHE QSQQKIFYDGQIYDAFRLLVDIIQSAEKSVLLIDNYVDLNTLNILAKKKKNVDVRIYTLE RTTLSKTDVKLFNTQYPFLSIEYIGNFHDRFLILDDERTYHIGASLKDAGKKCFALSLLK DKNVAKDIIGHIKSKRPLSCGNK >gi|312957209|gb|AENW01000006.1| GENE 25 25545 - 25991 249 148 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAEERNVKEKKEIIKEIQIKRVEWDVSLRAACILADANYPNVHYALKGNTVLASAKTLKS VLNAMKVLKNDSDQKKINFVNQSYVEYRIIKLYSTDPKEIDLMKRTLIKYVLKYYDALPF ETIRLFVEEEILSKELFTQTLKDKSKGD >gi|312957209|gb|AENW01000006.1| GENE 26 26206 - 31449 1039 1747 aa, chain - ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 589 1554 188 1129 1315 504 32.0 1e-142 MSKRGGGKSHENKRHEQLSLFDILLENDDQGFSCAAPAGEEQATLYNFEDESEIRHKIGA TDRRSESALQSGFEGDNVTRTNREFTSSEIYDGSTESDADSQRNYDEMVTAAPHAEEKAL QRFCLNINDDRKLNVQDKIIKNVEAIELLKSLKQQQATQDEQKKLSLFSGWGGCPQVFDD NNEKFEKERSKLKSLLSIEEYQNAKATTLTSFYTPLIVIENMYRILKKIGFQKGTVLETS IATGNFIGMMQEQMFNESAIYGIEIDSVSASIARQLYPGIEVLNKGFEECPYPDDCFDLA ISNVPFGTYQLHDVTLNKFKFKIHNYFFAKALQKIRNGGLIAFITSADTMDGSSNIMEYI NDRADFLGAIRLPSDIFMKNGANALVTSDIIFLRRNDDKISDPYEISTEKVDYTEHRKIN KYFVEHPEMVFGNIEEVKNQYGGYEIQVVSNKSIQDYFDEVLPIFQSVYQEKVEIYNESI YQDIDIAHNRYPINSYFVEDSRLYYRDDSSYYLIQTKDELKGKDLKIGHVTFNDQRDINK VKHMIQLVDKTITVIDSQVNQENDNVYIAKRDELNECYDIFVIAYGALHKRTNLPLISDD PRAYILHSLETYDSKTKKIDKASIFRERTIKPKKEIKDVEDLHDALLLSLDNRGEIDLRY IAHIYNKTEKDVESELLEKKYAFFDPESNEFVLADEYLSGNIRKKIKIANQAGYHDNVKS LEQVLPEEIKAEDIKIQLGSNWVPDQYVTDFVNYIFEHSIIQKSMTSIVYEKLSGEYIMD VPYLSGVAKTVWGVAPSDNIVGKRQPAYTGYDLLSDVLNSRIPTIRNYWTVYDNELRKDV VKSELNIERTTQARDLEEKLNEAWEEWIFSNYERKHELEHIYNELFNNIRLQEYDGSYLS FPEMNPAIQLEGYQKNAVARIMKKQSNTLLWQGVGAGKTFEMIAAGMEMKRLGLRNKILY VVPNHLIQQWHNDFLTLYPRAHLLVATKKDFLKDKRQMFINKIATGNYDAIIMAHSSFQF LSVSSEYQIEHMNKEIAVIENAIEQLSYENDKSIRTKRVKILERTKKSIEKNVKSLTDIR RDNNLIPFDKLGIDYMFLDESHEFKNLYTYTAMRNVAGLQTQHSQKASDMLLKVKLIEET GGNVCFATGTPVTNTMAELYTIQRYLQEDTLHDMGIYCFDGWAKVFGKAITSFEISVDGS KFVNRTRFCKFFNIQELMTQIRSIALIQTPGMLRKDLENSLIGRKEVIPPKHIGGKPQVI TIEPSQDLEAYIEDIVERTEAIHNNSVDSRIDNMLKVTSDSKKASIDMRLIDPTYPDDDE GKLSIIAKKIVELYYKYNNNKATQLVFCDSSTPSKRKNTEEGNNFQNVYVDMKNKLIKGG IIESEIAFIHDFNTEVAKDRLFKDMNDGNIRVLFGSTAKLGAGTNVQKRIIAIHHVDVPW RASDIEQQNGRAFRQGNMYKEIYEFRYVTRKSFDAYSWQMVETKSSYMTQLLEGSVMREI EEDLESSFSYSEVKAIASGNPIIKEKFEVDSEIKRIENLKKQYLRRKYKAQDDIVRLPNQ IIEYENKIQMLRDEWDYFSDKIYSVDDITEYFHFTSVRGRIFRDMKEAWEEVQDIVNSNN NYNEPIEIGKLLGKQIFIKTNEIFFETPSRLLKIDAVNPVGRVNFSRIIKSINQLHNDLI FFEHKLEALETNLCTAQSIVSMKFEYEDEYSKLRSRQKEIDRQLEIKKDTTYDLENEEEM QESGIEV >gi|312957209|gb|AENW01000006.1| GENE 27 31494 - 32297 144 267 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQLNLFESEEETPCIKYYYSKEELENSIQSGYSLHWEEREENGVYVKRFKSIGILQNGR DLFDEGFIRHFVNEKEAKSNLMGKISKWSSLKDDMISNTEKYRNITLDAKAVVQDNVFLI PSGGSEGNGFVTVYSPHWYIDLNGFYFNLKLSYEDKMDIDGRILYQLDKIESANRFIRRD IENNNTNYPFFFYDIEELLERISYLRGELNYEGEYKSKLPDLEDLINRLNLFKAERPKYF NRHKAEILDLAEEVDYDADEESEDYER >gi|312957209|gb|AENW01000006.1| GENE 28 32393 - 34540 394 715 aa, chain - ## HITS:1 COG:no KEGG:SE1500 NR:ns ## KEGG: SE1500 # Name: not_defined # Def: hypothetical protein # Organism: S.epidermidis # Pathway: not_defined # 96 433 91 428 1012 80 23.0 2e-13 MKKIYKMIVLFILLIFIAISPGQLKAATIHEVSGSNAIIDSYYSFAPKFTPGVSWAEFYG CRSYDSSALFRNEGATSGRLPTNSHLALLSSNAVVRSGRIGVRYNNVGYYNGSAVDLKIM LVDGEIRTATTTTHPESNMPSVAFMDNNIDIYQQSYQTRNFVWQFTFYIRGTNTPISVPF HANFKDIDNTEILGHGYNGVNSVYVMSKGSGGNLSYNSSQVYSPSELSGDNDRQNWATLT GAASSFRLGYTRTLDINVNTWDKGSDYRSFYHWKWSSDSLVRFDTPVPTKRINGNTSASI YDTTAYNYMIDFAVPPEDATTYYTSFKLNDNLANCLQLVNGANSITVRDSAGNDVTSKFS RSVSGQSIQLSLANVNDASFYGKSYVVTMNCRKKSSYDMSAWFNTSGSGSVSNTASITTD RGTKTSNAVTVGFYYKVTTSVTNGTITASTSSQLPNTSKTISYAPSNSDYELESVTIDGS AVNINSYPSSYTFSNVKDDHTINVKFKRVYKIDTSATGGTITSKITSIDKGEQRTITYTP NKGYYLRRLTVDGASVDLKAYPTSYTFSNISADHVIKADFLPIPELRIMKKIYADEVYLP SGDPTFIFKIKGVDYKGDPHEYTDVIRFTKADLGSDIMEKELIRKDIPAGSYKITEVSVS RYHLDNITDIVSGVKSGDSITLNTDGQNASATFINRRSDYHDYSDNDLVINTFSK >gi|312957209|gb|AENW01000006.1| GENE 29 34579 - 34911 148 110 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLVIVLAVMFAIGSLGISLDDIQRGATINTRIETQTYARLLTIFHVISYIILSAVFLTV LKMLIYMIRTMVIKRLNNDEMRKLGLAIRDSVIIPAANLESEDNESGKDT >gi|312957209|gb|AENW01000006.1| GENE 30 34997 - 35614 346 205 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKKSLVLGILVLLFFSIPIKAQQYEDEEIIQFEITDKGIQKEPIGDMVISQIVPGDEKT FMLLLRNGSRREQKLYLKLSAEEESLAEKMELQATQNDRILYKGTMQDAQAGFELGTYGI NEIETIHVELHLPDATDNELSMQQAAVSVAISAQTIEPTINTADHTRPAVIVTAILISGA IIIMILRDKKIKKGTKIRYEKRGKP >gi|312957209|gb|AENW01000006.1| GENE 31 35607 - 35969 221 120 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKARNLGADCYVRFKVSVYSGTGGELMHELGDTDMILAEGWSKKEDGYYYYKNIFKEDEI IDLYDAVIARSGIVTQEEQKLSIQTTIQAIQSTNYDMDNGWGNVVIQQTMNSRRDVILDE >gi|312957209|gb|AENW01000006.1| GENE 32 36182 - 36646 78 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255280140|ref|ZP_05344695.1| ## NR: gi|255280140|ref|ZP_05344695.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] # 12 140 24 154 167 69 32.0 6e-11 MSIIIVSITPISNAYFSHINTIDNEITIGENDIMIVETFSPPEEWKPNTIYKKNVKVRNT GTVPCYIRVYIALSDSDMPATMDYNTEKWIKGDSDYWYYKEIVLPGADTNSLITQVNIGN ASPAQLKSFNIIVYAESVQAEGYKNIYDAFSSIQ >gi|312957209|gb|AENW01000006.1| GENE 33 36679 - 37437 415 252 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255505139|ref|ZP_05344699.3| ## NR: gi|255505139|ref|ZP_05344699.3| conserved hypothetical protein [Bryantella formatexigens DSM 14469] # 26 216 17 195 203 113 36.0 1e-23 MEIKNKKKIGVITLALITGISIIGTSVAYFTSTNTKENPLTVGSVRTVLHEDRWDDLADT DHNGIPDLAEEIIPNKNIPKDPAIENTGKNPAWVYLEVRVPIVNIIIAQADGSRASKADT ELFLFTPDLDNWIQLSKIIEEDTDGKKTAVYVFGYETVLDPGQTTTELFTQVQFCNAIED QGLEDTNQIITVKSIAIQKEETGTMEEAYSKFINQEHVLPDKEEVIIPEEQKNSNDQRPR MEALDLNGGKNE >gi|312957209|gb|AENW01000006.1| GENE 34 37410 - 37919 77 169 aa, chain - ## HITS:1 COG:AF1655 KEGG:ns NR:ns ## COG: AF1655 COG0681 # Protein_GI_number: 11499245 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Archaeoglobus fulgidus # 19 169 1 160 290 68 34.0 6e-12 MNRYIPVKANCLKLKVYMMKTKNLIIGLILVLLLFYIGLNFKFLIITSGSMNPAVPTGSL VVVLNKDDSYKTGDIVSFKVENMIITHRIVEKKSNQEFVTKGDANLTKDFSYVSEKEIMG KVILSIPYIGYIVLFVKRCTIFILLLCAVFLLSKNEKRRTSWKSKIRKK >gi|312957209|gb|AENW01000006.1| GENE 35 37970 - 38770 324 266 aa, chain - ## HITS:1 COG:no KEGG:Clos_1848 NR:ns ## KEGG: Clos_1848 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 128 26 134 142 64 35.0 3e-09 MDWYVLDDQYINYLKNYDKKVPDIDYGPYRMKAFIGIVLKTIDGFDYLAPLTSYKPRFQE MSDSIEFIKIRDNNGRILGALDINYMVPAPQSCYEMLTLDNIGNYRRFKDEREKYQYWRL LKKELNYLNQKEVIVKGSAERLLHLIEQNPNHPLAHRCCSFGTLEMACRKWEYLENINEE AKEPYQVGKFIIANEGFEDLDINENDILEIVRYDVKEDIYQLENASLGYAQYHLIEGYDM NNLSYGSDCFDSEEEAAASLKEELEM >gi|312957209|gb|AENW01000006.1| GENE 36 39028 - 39774 393 248 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYVYLNQEDTVKEYLNVMEENGCYDERSQVKAFVDVCDLMTRYIGDLTNQIVDMQSKLQ LMEDKTLKRQMEQVVKKVDDTKNIAKRRLESSKKTFMHTVKDELNKYAEYGKSMIGSVSK SLHLKDHMISLSKVFNAVKRAADNGIDRLTDYKNRGYEAKEYLRGAKSVLKGEEFNIKER VSDKGILHHLQTFLFGVMGKCENISGTLNHSAQLIQNFENMHGFGNDIEEGIGEEMDDIR EPDEVQGM >gi|312957209|gb|AENW01000006.1| GENE 37 39797 - 40144 251 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNYIESEKCSKTISCNDVEKGIINDLWEFFDKYAFFELYDLSMEYEEFSKEAQLMMESE DGINNIISLLDDYIEADEETDEAFMLKKRLLEEKNMSLLSSTEPEDEPEESGQEL >gi|312957209|gb|AENW01000006.1| GENE 38 40223 - 41305 605 360 aa, chain - ## HITS:1 COG:no KEGG:Clos_1919 NR:ns ## KEGG: Clos_1919 # Name: not_defined # Def: zinc finger CHC2-family protein # Organism: A.oremlandii # Pathway: not_defined # 16 326 4 299 409 78 26.0 4e-13 MVENKQYKIKIYTEDEKAKLKELTNVIRDELSILEVASNLYGLTFQKAKQGARYIKCVEH SSMVFDLQKNKAYHNAKVGRTAMSVFDFVAYEDNISFTEARNKIIDYYKNRDPNQVQLFH YNIMKNEVKSTQGLVLPKHNDTNQHVIDYLVESRKINPRLVKELIDGQMLYEDKNENCVF VGFDGKGKAQFGFRRGTKKTIPYKCDCFGSFKQVGWYHEIHPALEKLVLCEAMIDGCSYL SMYDNYDANVLCSSGAGCALITLQYAFDNRPHVLDNCKTLVLALDPDGAGREASKEIIAY MKENHPDIIIESFEYEREGEDLNECLIRHCEENEIRELEISEVDINKNSEMMMGEEGIQC >gi|312957209|gb|AENW01000006.1| GENE 39 41315 - 41887 231 190 aa, chain - ## HITS:1 COG:MA1979 KEGG:ns NR:ns ## COG: MA1979 COG2003 # Protein_GI_number: 20090827 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Methanosarcina acetivorans str.C2A # 21 138 99 215 229 87 39.0 2e-17 MNEVNSIPVVSLRIKEDSKLYAEEPISNAEDAVKIFTKAIYKDLGFQDRESFLLLNLNTK NQPINMSVVAVGSLDHASIDIKSVFKTALLSNTAKMIVFHNHPSGCNTPSLEDIRFTDLL YTASNLMGLQLLDHIIVAKDCMSNELKLFSFNEHHLFPDGIYRDRLFETDIDLSKIRDEA MAEEVLDIER >gi|312957209|gb|AENW01000006.1| GENE 40 41880 - 42017 208 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSSCDVANKEFHDLSAALSWIGKELPDNLVIIELKKEEDGSDE >gi|312957209|gb|AENW01000006.1| GENE 41 41998 - 42228 234 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKKDNVKTEGLYLVIEGIYGEPMLLSRELYEKLDMESLPIEIIETDIAYEEAERVFDLL RYGDQEEELEYEEVEL >gi|312957209|gb|AENW01000006.1| GENE 42 42246 - 43088 321 280 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKICKMSKKDLDTKRRYDELNDFKLGSQMICEGYVNRLNRISDEMNEVTVNIEEMQSLL NDKKDLLENFETKKHSMIYRVSKKNREMIDDNITKLTAEIHDLNELLETKLLIEHHERRR NDLDKQMEELKQSLANEEVINLKQIISKLEHNAWYGGNTTLYLKCGDDIAMINAYTYEIG YESYSTASSLTLNDECLFELNSRNVDAYRYKCFTSGKFNTIDEAINYIETKFDDKDVCIT DVRPQQQMEGTDRSDTCSLYLYTYDEEDEEVEEMQEEPEF >gi|312957209|gb|AENW01000006.1| GENE 43 43098 - 44267 232 389 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQNDSYYVPLEDFKYLPITKSEHALCNKIILHKNCCDILQEIYNNEEANIKNYMNIHNE SFAVDKENIPEFLYNLSLREDSPFISKDKEYVQEVYSKYSKTQYVKKEREYNDTVFDYHR ETGKEIEYIEKSMIENMDDEYRNKYRIVNILRNVEDMAMNVRVGADSLREALKDYLSTLS LSFSDNPELDIIDSTKFQDVYALKEGYGIKISFSNNGSRNLAFDSNPDRYALTIESPFYE PNNKGFINLYGPNCEIPYETDWDKFVGNLCERYNELKERLSEDPLVYVALNEADQEDPDC ISKTIKGILEEAKYERLQVISAVYRNYDKCFDIDIPTIYDSFRNKLSMYAEYKEIIFSGL DEIELREQERSYSQDQEEEEAEAVDEEEI >gi|312957209|gb|AENW01000006.1| GENE 44 44293 - 45726 492 477 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2812 NR:ns ## KEGG: ECO103_2812 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 205 424 1191 1430 2784 134 36.0 1e-29 MSKLSIMCENVKEEVDILNFYITEFAKEFIQPGSPTTYYVKILPQYEDTIDNKILKAVQE RPGFDKIDKEIQKRKFYYSEEDKLLSPYQFLLYDQRHIYFKDMFGKSTLTDGCNYYYAQH DELKPNVWQSNTYFIVKSHTVVSFNHETLQAAKDFILKNVDTSPTSEKRNIKGAFKIEYL ENIVRRSPGMRETRYANGNMYLQDFGFRGGEFGNWLSEKERQISLNFGYDALIDLCAALQ IDKKDISLGGRLAIAFGARGRGSAMAHYEPLLEVINLTKLRGAGCLAHEWAHALDDILSE SLMMRISNGGKGIMLELMNAMKYDENLYITKYYEGSKYFDEVYRKCDKGYWCSNEELFAR AFSCYIEDKLEDMGIRNDYLCGQSDIFVTKNFESGEIIRAYPIDEERKKINICFDKLMEY LKEQGLLHVPCKDSKLKEMNSLSYTDIVPGEILNDDTQQMMFDFENNDENLESELEL >gi|312957209|gb|AENW01000006.1| GENE 45 46031 - 46486 347 151 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNGEDSNYISYLMQLKKNPQKWNDMKRLYHLLSIIGEHPDALQILGNLQLIDRDNVQVMQ KTGLNGWRMAQELIKRMEIRTTNSDELTYKFYGHYKKLTAVELDQMIDLVSDYIQRQHEI ANWIEEKYGTISEVAMIQEEETTLNELEQGL >gi|312957209|gb|AENW01000006.1| GENE 46 46719 - 47135 231 138 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSYRKESVSNKNTIRSYECAWENDKENYRSIILLKTDDEKVLYYAKEDRMQLTAETDLII TEEMKKALYGGISGQGIKKDATINKKGWYITRLEIDLENVDLSVLKNNLIISDYKNNQVT IEHMKKDIQNNGYSCSLL >gi|312957209|gb|AENW01000006.1| GENE 47 47225 - 47572 226 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKHTEIKFSHKSAADYILSNPYNKKTIWLILLPWVFEKVLGNFIYFENHGEVDGYRAIG VVRKYEYEHEYYLNPTENTEIAYLITTNSCWTFDIRDYGRTWILDYDEAERKWTS >gi|312957209|gb|AENW01000006.1| GENE 48 47574 - 47864 119 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLMEWYLLLDFTDDLFDNYKLIENTMKISFYQILKVDYYDLLRLNQLRLRVPIIYHVDD LRIFQKCYPKIGDLRNVAKDIVIDIYGNIEKLGEII >gi|312957209|gb|AENW01000006.1| GENE 49 48513 - 48989 -42 158 aa, chain - ## HITS:1 COG:no KEGG:Ppro_3817 NR:ns ## KEGG: Ppro_3817 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: P.propionicus # Pathway: not_defined # 20 156 186 313 333 84 35.0 8e-16 MILDNNFFSCSQWRKNIELIRNWNQPVTFQQGLDLRIMTEEMGKALSTLRIKGSGIYIAW DNYEDKEVVLKGIEILTKYIKPWKINCYVLVGFRQNYITNEDLERVMILRELGVNPFAMG YINFHDPHYKKSCEIKRFCRWVNMKAAFNSCAWEDYNR >gi|312957209|gb|AENW01000006.1| GENE 50 49412 - 49954 149 180 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|260880943|ref|ZP_05893266.1| ## NR: gi|260880943|ref|ZP_05893266.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544] # 1 90 7 107 129 63 34.0 5e-09 MRTSAWKKSGCNNYSLDNKRGVSHPISLWTDTDVEQYVNDEQVELSEIYTQYQQKRTGCV NCPYGAHCNDDSRFDLLKRIEPARYDYFMSTKLRKILALSDVDILSDLEYMLYKNLVQED VKHWHKEAKGIDKYLAWKVRYALSIYTAVELLDGVKHIEMYPLKYPIEKILDEIEKERER >gi|312957209|gb|AENW01000006.1| GENE 51 50791 - 51627 95 278 aa, chain - ## HITS:1 COG:lin0088 KEGG:ns NR:ns ## COG: lin0088 COG0338 # Protein_GI_number: 16799166 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Listeria innocua # 1 265 1 264 270 183 37.0 3e-46 MKPILKYPGSKWRIAQEIVNLFPQHRSYVEPFFGSGAVLFNKELSSIETINDIDNDIVNL FQIIRDEPEKLQKLLCGTPYARSVYDEVFVRTPTNKYEQAIFFLIKCWQGHGYRLNGGKT GWRNDVQGREKAYALLDWNNLSTRINEVTQRLRMVQIDNVSAISIIKKFNYDNVLMYLDP PYVMGTRRYQKGQYKHEMTNADHVELLQTVKESKAKIIISGYASKLYDSELHLWNRRELT SNDNKGKATVEVVWMNYEPPTQLTIDDFIKESIDQNQC >gi|312957209|gb|AENW01000006.1| GENE 52 51638 - 53182 325 514 aa, chain - ## HITS:1 COG:mlr8517 KEGG:ns NR:ns ## COG: mlr8517 COG0270 # Protein_GI_number: 13477024 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Mesorhizobium loti # 18 326 32 364 667 244 40.0 3e-64 MKNRKSISIFDEIIVDNFAGGGGASTGIELALGRPIDIAINHDPDAIEMHKKNHPYTEHL CESVWDVDPVQVCRGRKIALAWFSPDCTHFSKAKGGKPVKKEIRGLAWVTLKWAKLSEEL KPRVIMLENVEEFKTWGPLTDDGHPDPEHKGETFNDFVDALRSCGYEVQWRELKACDYGA PTTRKRFFLIARSDGQHIVWPEPTHASPDSEYVKTGVKKPYVPAKDIIDWSISAPSIFER KKPLSEATNKRIARGIFKYVINNADPFMIQVNHSHDYFRGQELTESVPTITAKNGYALVA PTLLQMGFPDNDGKRICDLDDPLKTICSGGNKYAIATAFLKKSYGGNYNGAGTGMHRQVD TITAIDHNRLCILDYCNHDVTIKNHHEDVNAFLIKYYGQGIGQEVNEPLHTIPSKDRFAL ITVKGIKYRICDIGLRMLTPRELYNAQGFPADYEIEIGASGKKLSKAKQVARCGNSVPPA FAAALAKVNLPEYAVKQPILTMAVLNELIAYQVY >gi|312957209|gb|AENW01000006.1| GENE 53 53172 - 53711 287 179 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNINIKYLMSGCNNLHEVIEMLTWIENEGLQEVYRTITKEFSEIWLPMNANEVIEEDILS RKSVLSVLEKGTNTCYHFEELDLENYKIMLTKLMDLMDFMAIPKDGGQFNELVTFLTTIQ AVDPEFEDSDFIVLFHAMHDYIKKGEGSLSRHELLTLYYMSQYLIQIIDKKRDGFFNEK >gi|312957209|gb|AENW01000006.1| GENE 54 53728 - 53928 87 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVAIIFSLGHIMATLMVSVELASLGFIYYVSLYLISALFYYKKGILYAILIHAGANAAA LFLTMI >gi|312957209|gb|AENW01000006.1| GENE 55 54389 - 55030 112 213 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIIPIVERSTVMKNRMNNILSKMKKVIKNVAVNVNATMLELYGEDRIERIKQISEKRREK YEIVLGIVGVNEVIVSFAINYQIMWIIWQVIMDPPFGKEEYAYPFEINNALLCFLIVIIL MKHLITHEIPLIDKYIYLIRYLPICFVLAIYLTNIGKSDILFQLFYLCILRFICNSLSKA IPPLVYPDYFISEGLIRGRGRPAKYKDNVDQND >gi|312957209|gb|AENW01000006.1| GENE 56 55114 - 55392 87 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYMEKVDEVFTRISEKIIPIFLINNCIWFLFFVIFDDLDYVFSFDIYMRKLCWKLEYDKE HTVGLIDTLKLLLGGFVAALYFLYVVFSILIS >gi|312957209|gb|AENW01000006.1| GENE 57 55444 - 55749 99 101 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRERGIKMNEFRVWDKKENKMYYDGFLIGTSGELYRVVESFENLDNSLDFNIIAVNQENY DVMHCLSGRTDKSCEPVYAKDILRYDTGYEFCIEYGTHDAY >gi|312957209|gb|AENW01000006.1| GENE 58 55936 - 56232 59 98 aa, chain - ## HITS:1 COG:no KEGG:Daci_4131 NR:ns ## KEGG: Daci_4131 # Name: not_defined # Def: hypothetical protein # Organism: D.acidovorans # Pathway: not_defined # 1 94 50 143 159 108 54.0 6e-23 RPVSRMLDDGVTIEIVRCCTDGTYNACSFLYSRITRAAKEMGYTKAITYILEEEIGSSLK ASGWHKEADTYGHSWNCPSRPRSTKAPQCNKQRWSKNL Prediction of potential genes in microbial genomes Time: Sat May 14 01:34:57 2011 Seq name: gi|312957022|gb|AENW01000007.1| Clostridium sp. HGF2 contig00002, whole genome shotgun sequence Length of sequence - 188180 bp Number of predicted genes - 183, with homology - 172 Number of transcription units - 84, operones - 41 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 54 - 113 10.2 1 1 Op 1 7/0.000 + CDS 271 - 753 150 ## COG2190 Phosphotransferase system IIA components 2 1 Op 2 7/0.000 + CDS 759 - 1604 577 ## COG3711 Transcriptional antiterminator + Prom 1606 - 1665 5.5 3 1 Op 3 . + CDS 1687 - 3084 1175 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 4 1 Op 4 2/0.000 + CDS 3145 - 4035 391 ## COG0657 Esterase/lipase 5 1 Op 5 . + CDS 4037 - 4927 597 ## COG0657 Esterase/lipase 6 1 Op 6 4/0.000 + CDS 4932 - 6236 615 ## COG1621 Beta-fructosidases (levanase/invertase) 7 1 Op 7 . + CDS 6233 - 7171 614 ## COG0524 Sugar kinases, ribokinase family + Term 7397 - 7437 2.2 + Prom 7520 - 7579 5.0 8 2 Op 1 1/0.000 + CDS 7625 - 9262 1522 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 9 2 Op 2 . + CDS 9295 - 10878 1947 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family + Term 10942 - 10975 2.9 - Term 11211 - 11264 11.2 10 3 Op 1 . - CDS 11285 - 12661 1711 ## COG1362 Aspartyl aminopeptidase 11 3 Op 2 . - CDS 12740 - 13519 804 ## COG0796 Glutamate racemase - Prom 13546 - 13605 6.6 + Prom 14099 - 14158 5.1 12 4 Tu 1 . + CDS 14307 - 16184 1162 ## COG3711 Transcriptional antiterminator + Term 16332 - 16372 1.1 13 5 Tu 1 . - CDS 16181 - 16975 572 ## SSON_1293 hypothetical protein - Term 16988 - 17042 1.1 14 6 Op 1 10/0.000 - CDS 17046 - 18347 1234 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 15 6 Op 2 2/0.000 - CDS 18371 - 18661 484 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 16 6 Op 3 2/0.000 - CDS 18679 - 20058 1275 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 17 6 Op 4 . - CDS 20048 - 20371 396 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Prom 20500 - 20559 7.1 + Prom 20492 - 20551 8.8 18 7 Tu 1 . + CDS 20596 - 22311 1843 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 22325 - 22367 9.1 - Term 22541 - 22580 -0.1 19 8 Tu 1 . - CDS 22600 - 23520 717 ## COG0618 Exopolyphosphatase-related proteins - Prom 23542 - 23601 5.6 - Term 23792 - 23826 0.4 20 9 Op 1 . - CDS 23904 - 25154 1523 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 21 9 Op 2 11/0.000 - CDS 25156 - 26094 1300 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 22 9 Op 3 5/0.000 - CDS 26091 - 26858 744 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 23 9 Op 4 4/0.000 - CDS 26872 - 28977 2381 ## COG3711 Transcriptional antiterminator 24 9 Op 5 . - CDS 29035 - 30399 1637 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Prom 30437 - 30496 7.7 - Term 30692 - 30718 -0.6 25 10 Op 1 7/0.000 - CDS 30746 - 32173 1716 ## COG0534 Na+-driven multidrug efflux pump 26 10 Op 2 . - CDS 32190 - 32615 466 ## COG1846 Transcriptional regulators - Prom 32640 - 32699 9.1 27 11 Tu 1 . - CDS 32760 - 33158 350 ## - Prom 33190 - 33249 7.0 28 12 Tu 1 . - CDS 33446 - 33928 418 ## gi|223985514|ref|ZP_03635571.1| hypothetical protein HOLDEFILI_02877 - Prom 33969 - 34028 4.7 29 13 Tu 1 . - CDS 34479 - 34850 392 ## - Prom 34982 - 35041 4.2 - Term 35142 - 35174 -0.8 30 14 Tu 1 . - CDS 35191 - 36498 1523 ## COG0422 Thiamine biosynthesis protein ThiC - Prom 36699 - 36758 4.5 31 15 Tu 1 . - CDS 36859 - 38421 1325 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 38542 - 38601 6.4 32 16 Tu 1 . - CDS 38810 - 39352 323 ## PROTEIN SUPPORTED gi|227425883|ref|ZP_03908949.1| acetyltransferase, ribosomal protein N-acetylase - Prom 39374 - 39433 8.5 33 17 Tu 1 . - CDS 40016 - 40567 308 ## PROTEIN SUPPORTED gi|227425883|ref|ZP_03908949.1| acetyltransferase, ribosomal protein N-acetylase - Prom 40589 - 40648 6.7 34 18 Op 1 . - CDS 40918 - 41712 642 ## COG0345 Pyrroline-5-carboxylate reductase - Term 41733 - 41763 0.3 35 18 Op 2 . - CDS 41791 - 42054 229 ## Amet_3815 hypothetical protein 36 18 Op 3 . - CDS 42133 - 42600 403 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 42759 - 42818 3.9 37 19 Op 1 45/0.000 - CDS 42826 - 43680 763 ## COG0842 ABC-type multidrug transport system, permease component 38 19 Op 2 . - CDS 43677 - 44588 371 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 44695 - 44754 4.9 39 20 Tu 1 . - CDS 44908 - 45333 371 ## Dalk_4241 hypothetical protein - Prom 45396 - 45455 9.5 - Term 45879 - 45910 -0.5 40 21 Tu 1 . - CDS 45917 - 46288 200 ## smi_1700 hypothetical protein - Prom 46356 - 46415 8.4 41 22 Op 1 . - CDS 47170 - 47385 140 ## gi|255282322|ref|ZP_05346877.1| prophage LambdaSa04, site-specific recombinase, resolvase family 42 22 Op 2 . - CDS 47452 - 47616 124 ## smi_1701 hypothetical protein - Prom 47636 - 47695 4.6 - Term 47807 - 47845 0.6 43 23 Tu 1 . - CDS 47996 - 48601 398 ## gi|295094567|emb|CBK83658.1| hypothetical protein - Term 48626 - 48673 10.2 44 24 Op 1 . - CDS 48701 - 49645 396 ## COG3943 Virulence protein 45 24 Op 2 . - CDS 49658 - 49870 353 ## gi|291526893|emb|CBK92479.1| hypothetical protein - Prom 49918 - 49977 9.1 - Term 50166 - 50216 9.8 46 25 Tu 1 . - CDS 50245 - 51123 263 ## Teth514_1217 hypothetical protein - Prom 51239 - 51298 4.7 - Term 51515 - 51560 1.2 47 26 Op 1 . - CDS 51806 - 52852 834 ## COG3943 Virulence protein 48 26 Op 2 . - CDS 52917 - 53657 225 ## MXAN_4131 hypothetical protein - Prom 53782 - 53841 4.1 49 27 Op 1 . - CDS 54290 - 56110 1044 ## COG1479 Uncharacterized conserved protein 50 27 Op 2 . - CDS 56110 - 58758 595 ## COG1204 Superfamily II helicase 51 27 Op 3 . - CDS 58758 - 59666 198 ## CLM_2299 hypothetical protein 52 27 Op 4 . - CDS 59678 - 62947 1095 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 53 27 Op 5 . - CDS 62959 - 63861 240 ## Swol_0509 hypothetical protein 54 27 Op 6 . - CDS 63875 - 64126 167 ## VCD_001189 hypothetical protein - Prom 64173 - 64232 3.5 - Term 64773 - 64804 -0.6 55 28 Op 1 . - CDS 64992 - 66608 883 ## COG0286 Type I restriction-modification system methyltransferase subunit 56 28 Op 2 . - CDS 66613 - 66834 108 ## Teth514_1226 DNA binding domain-containing protein - Prom 66888 - 66947 2.9 57 29 Tu 1 . - CDS 67060 - 67545 133 ## gi|289640253|ref|ZP_06472470.1| hypothetical protein EthhaDRAFT_2548 58 30 Tu 1 . + CDS 67934 - 68125 104 ## gi|293401128|ref|ZP_06645272.1| hypothetical protein HMPREF0863_01412 59 31 Tu 1 . + CDS 68369 - 68887 491 ## DET1104 hypothetical protein + Term 68895 - 68936 8.8 + Prom 68897 - 68956 8.7 60 32 Op 1 . + CDS 69031 - 69240 207 ## 61 32 Op 2 . + CDS 69176 - 69496 405 ## EUBELI_01535 hypothetical protein 62 32 Op 3 . + CDS 69498 - 69836 96 ## DET1102 hypothetical protein + Prom 69839 - 69898 3.7 63 33 Op 1 . + CDS 70013 - 70636 465 ## DET1102 hypothetical protein 64 33 Op 2 . + CDS 70629 - 71201 274 ## DET1101 hypothetical protein 65 33 Op 3 . + CDS 71216 - 71389 301 ## + Term 71401 - 71441 7.1 66 33 Op 4 . + CDS 71456 - 71641 201 ## gi|163814575|ref|ZP_02205964.1| hypothetical protein COPEUT_00726 + Term 71647 - 71686 8.9 67 34 Tu 1 . + CDS 71696 - 73636 993 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 73660 - 73698 1.3 + Prom 73678 - 73737 2.2 68 35 Op 1 . + CDS 73787 - 74206 350 ## DET0073 hypothetical protein 69 35 Op 2 . + CDS 74210 - 74539 296 ## DET1099 hypothetical protein 70 35 Op 3 . + CDS 74539 - 76812 1316 ## COG3378 Predicted ATPase + Prom 76821 - 76880 1.6 71 36 Op 1 . + CDS 76952 - 77233 196 ## DET1097 hypothetical protein 72 36 Op 2 . + CDS 77214 - 78557 770 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 73 36 Op 3 . + CDS 78624 - 79043 385 ## EUBELI_01548 hypothetical protein + Term 79106 - 79148 7.7 + Prom 79047 - 79106 2.5 74 37 Tu 1 . + CDS 79167 - 79526 326 ## COG1403 Restriction endonuclease + Prom 79592 - 79651 1.9 75 38 Tu 1 . + CDS 79743 - 80297 480 ## BCE_0390 hypothetical protein + Prom 80301 - 80360 2.3 76 39 Tu 1 . + CDS 80451 - 81701 720 ## COG0863 DNA modification methylase + Prom 81718 - 81777 4.0 77 40 Op 1 . + CDS 81820 - 82506 389 ## DET1091 virulence-related protein 78 40 Op 2 . + CDS 82490 - 82720 250 ## DET1090 hypothetical protein + Prom 82729 - 82788 4.5 79 41 Op 1 . + CDS 82845 - 83213 242 ## Amet_4035 hypothetical protein 80 41 Op 2 . + CDS 83217 - 83459 313 ## Amet_4034 hypothetical protein + Term 83486 - 83515 0.3 + Prom 83488 - 83547 3.4 81 42 Tu 1 . + CDS 83568 - 85169 1124 ## COG4626 Phage terminase-like protein, large subunit + Term 85174 - 85214 0.7 - Term 85159 - 85202 5.1 82 43 Op 1 . - CDS 85210 - 85539 251 ## HMPREF0424_0746 toxin-antitoxin system, toxin component, RelE family 83 43 Op 2 . - CDS 85536 - 85841 361 ## HMPREF0424_0747 putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein - Prom 85913 - 85972 3.3 84 44 Tu 1 . - CDS 85974 - 86201 62 ## - Prom 86400 - 86459 2.7 85 45 Op 1 3/0.000 + CDS 86271 - 87332 402 ## COG4695 Phage-related protein 86 45 Op 2 1/0.000 + CDS 87217 - 87960 610 ## COG0740 Protease subunit of ATP-dependent Clp proteases 87 45 Op 3 . + CDS 87976 - 89160 915 ## COG4653 Predicted phage phi-C31 gp36 major capsid-like protein + Term 89165 - 89212 7.4 88 46 Op 1 . + CDS 89226 - 89498 207 ## DET1084 DNA packaging protein, putative 89 46 Op 2 . + CDS 89498 - 89830 177 ## DET1083 head-tail adaptor, putative 90 46 Op 3 . + CDS 89832 - 90215 313 ## DET1082 hypothetical protein 91 46 Op 4 . + CDS 90208 - 90525 274 ## DET1081 hypothetical protein 92 46 Op 5 . + CDS 90531 - 91103 511 ## DET1080 phi13 family major tail protein 93 46 Op 6 . + CDS 91118 - 91492 386 ## DET1079 hypothetical protein 94 47 Op 1 . + CDS 91669 - 94821 1494 ## COG5283 Phage-related tail protein 95 47 Op 2 . + CDS 94818 - 95468 116 ## gi|255284305|ref|ZP_05348860.1| conserved hypothetical protein 96 47 Op 3 . + CDS 95465 - 97186 875 ## EUBREC_1301 hypothetical protein 97 47 Op 4 . + CDS 97201 - 99096 899 ## MGAS10270_Spy0841 phage structural protein 98 47 Op 5 . + CDS 99167 - 99580 380 ## COG4824 Phage-related holin (Lysis protein) 99 47 Op 6 . + CDS 99582 - 100535 404 ## Amet_2548 sporulation domain-containing protein + Term 100550 - 100591 9.3 + Prom 100537 - 100596 7.9 100 48 Op 1 . + CDS 100686 - 100883 141 ## gi|293401168|ref|ZP_06645312.1| conserved hypothetical protein 101 48 Op 2 . + CDS 100938 - 102503 658 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 102 48 Op 3 . + CDS 102504 - 102920 186 ## DET1068 phage integrase family site specific recombinase 103 48 Op 4 . + CDS 102920 - 103957 430 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Prom 103961 - 104020 1.6 104 49 Tu 1 . + CDS 104087 - 104326 59 ## EUBELI_01551 hypothetical protein + Term 104507 - 104545 5.3 - Term 104495 - 104533 5.3 105 50 Op 1 . - CDS 104539 - 105900 272 ## KPN_01440 hypothetical protein 106 50 Op 2 . - CDS 105897 - 106448 358 ## KPN_01441 hypothetical protein 107 50 Op 3 . - CDS 106474 - 107301 275 ## gi|210612226|ref|ZP_03289195.1| hypothetical protein CLONEX_01395 - Prom 107491 - 107550 3.8 - Term 107493 - 107558 10.2 108 51 Op 1 . - CDS 107580 - 108914 1280 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 109 51 Op 2 . - CDS 108951 - 109547 685 ## gi|160914431|ref|ZP_02076646.1| hypothetical protein EUBDOL_00435 - Prom 109615 - 109674 5.3 - Term 109564 - 109599 2.9 110 52 Op 1 21/0.000 - CDS 109813 - 111237 1942 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 111 52 Op 2 . - CDS 111234 - 112655 1832 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 112 52 Op 3 . - CDS 112657 - 112950 478 ## gi|293401239|ref|ZP_06645383.1| glutamyl-tRNA(Gln) amidotransferase, C subunit - Prom 113042 - 113101 7.3 113 53 Op 1 4/0.000 - CDS 113133 - 114257 1536 ## COG4851 Protein involved in sex pheromone biosynthesis 114 53 Op 2 5/0.000 - CDS 114241 - 116238 2569 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 115 53 Op 3 . - CDS 116249 - 118540 2678 ## COG0210 Superfamily I DNA and RNA helicases - Prom 118563 - 118622 5.6 + Prom 118650 - 118709 5.5 116 54 Tu 1 . + CDS 118732 - 120315 2178 ## COG1316 Transcriptional regulator + Term 120353 - 120401 1.1 117 55 Tu 1 . - CDS 120263 - 120481 58 ## - Prom 120725 - 120784 4.7 + Prom 120608 - 120667 6.7 118 56 Op 1 . + CDS 120698 - 121516 678 ## COG0005 Purine nucleoside phosphorylase 119 56 Op 2 . + CDS 121528 - 122202 685 ## COG3201 Nicotinamide mononucleotide transporter 120 56 Op 3 . + CDS 122265 - 122900 613 ## CPF_0388 cyclic nucleotide-binding protein + Term 123143 - 123172 2.1 121 57 Tu 1 . - CDS 123270 - 124280 1294 ## COG0673 Predicted dehydrogenases and related proteins - Prom 124311 - 124370 4.2 122 58 Op 1 10/0.000 - CDS 124404 - 125792 2040 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 123 58 Op 2 13/0.000 - CDS 125821 - 126096 458 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 124 58 Op 3 7/0.000 - CDS 126118 - 126588 680 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 125 58 Op 4 5/0.000 - CDS 126557 - 127048 354 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 127088 - 127147 5.0 - Term 127114 - 127156 -1.0 126 58 Op 5 . - CDS 127173 - 129197 2402 ## COG3711 Transcriptional antiterminator - Prom 129365 - 129424 7.5 + Prom 129288 - 129347 7.4 127 59 Tu 1 . + CDS 129389 - 130990 1996 ## COG1316 Transcriptional regulator + Term 130995 - 131042 8.6 - Term 131127 - 131175 9.3 128 60 Op 1 . - CDS 131188 - 132423 1460 ## BHWA1_01494 hypothetical protein - Term 132434 - 132463 -0.2 129 60 Op 2 . - CDS 132465 - 133145 792 ## gi|293402006|ref|ZP_06646146.1| ferrichrome-binding periplasmic protein 130 60 Op 3 . - CDS 133186 - 134343 1230 ## COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain - Prom 134369 - 134428 4.2 + Prom 134318 - 134377 4.5 131 61 Tu 1 . + CDS 134468 - 135349 904 ## COG1092 Predicted SAM-dependent methyltransferases - Term 135511 - 135548 3.1 132 62 Op 1 . - CDS 135553 - 136035 616 ## COG0105 Nucleoside diphosphate kinase 133 62 Op 2 3/0.000 - CDS 136114 - 137877 2038 ## COG0685 5,10-methylenetetrahydrofolate reductase 134 62 Op 3 . - CDS 137874 - 140234 2780 ## COG1410 Methionine synthase I, cobalamin-binding domain 135 62 Op 4 . - CDS 140224 - 140883 664 ## EUBELI_01383 5-methyltetrahydrofolate--homocysteine methyltransferase - Term 141179 - 141212 1.1 136 63 Tu 1 . - CDS 141237 - 142094 940 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 142146 - 142205 5.5 137 64 Tu 1 . - CDS 142285 - 142677 332 ## - Prom 142708 - 142767 4.9 - Term 142738 - 142777 6.1 138 65 Op 1 . - CDS 142784 - 145297 1752 ## gi|293401963|ref|ZP_06646103.1| cell wall surface anchor signal protein 139 65 Op 2 . - CDS 145294 - 145836 645 ## - Prom 145874 - 145933 3.0 - Term 145935 - 145969 0.3 140 66 Tu 1 . - CDS 145982 - 147154 1126 ## COG3947 Response regulator containing CheY-like receiver and SARP domains - Prom 147238 - 147297 3.1 - Term 147509 - 147547 3.2 141 67 Op 1 . - CDS 147567 - 149105 1803 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 142 67 Op 2 . - CDS 149123 - 150076 1037 ## gi|160914449|ref|ZP_02076664.1| hypothetical protein EUBDOL_00453 - Prom 150098 - 150157 6.5 + Prom 149850 - 149909 6.0 143 68 Tu 1 . + CDS 150134 - 150343 114 ## - Term 150312 - 150347 2.7 144 69 Tu 1 . - CDS 150368 - 155191 4714 ## COG1621 Beta-fructosidases (levanase/invertase) - Prom 155235 - 155294 3.8 145 70 Tu 1 . - CDS 155345 - 156022 763 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 156043 - 156102 4.7 - Term 156479 - 156513 3.0 146 71 Op 1 . - CDS 156526 - 157188 685 ## COG2188 Transcriptional regulators 147 71 Op 2 . - CDS 157210 - 158295 1258 ## COG3589 Uncharacterized conserved protein 148 71 Op 3 . - CDS 158330 - 158800 535 ## gi|293401797|ref|ZP_06645938.1| hypothetical protein HMPREF0863_02078 149 71 Op 4 . - CDS 158813 - 158983 206 ## 150 71 Op 5 . - CDS 159017 - 159238 346 ## lse_2621 hypothetical protein 151 71 Op 6 13/0.000 - CDS 159270 - 159581 468 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Term 159589 - 159632 3.8 152 71 Op 7 10/0.000 - CDS 159657 - 161078 1604 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 161099 - 161158 9.0 153 71 Op 8 . - CDS 161171 - 161473 449 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 161644 - 161703 7.5 - Term 161853 - 161898 1.3 154 72 Tu 1 . - CDS 161959 - 162456 620 ## Ccel_1541 hypothetical protein - Prom 162517 - 162576 2.5 155 73 Tu 1 . - CDS 162582 - 163058 293 ## COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 163237 - 163296 4.5 - Term 163301 - 163354 3.6 156 74 Op 1 10/0.000 - CDS 163359 - 164003 778 ## COG2376 Dihydroxyacetone kinase 157 74 Op 2 . - CDS 164003 - 165013 1227 ## COG2376 Dihydroxyacetone kinase 158 74 Op 3 . - CDS 165027 - 165476 589 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 165527 - 165586 2.0 - Term 165554 - 165598 9.6 159 75 Op 1 . - CDS 165606 - 166520 1007 ## Sterm_0654 cupin 2 conserved barrel domain protein 160 75 Op 2 7/0.000 - CDS 166537 - 167562 1471 ## COG1299 Phosphotransferase system, fructose-specific IIC component 161 75 Op 3 8/0.000 - CDS 167600 - 167902 499 ## COG1445 Phosphotransferase system fructose-specific component IIB 162 75 Op 4 . - CDS 167938 - 168420 570 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 163 75 Op 5 2/0.000 - CDS 168442 - 169314 1013 ## COG0191 Fructose/tagatose bisphosphate aldolase 164 75 Op 6 . - CDS 169347 - 170207 1049 ## COG1082 Sugar phosphate isomerases/epimerases 165 75 Op 7 . - CDS 170223 - 172181 2125 ## COG3711 Transcriptional antiterminator - Prom 172351 - 172410 6.9 166 76 Tu 1 . - CDS 172981 - 173394 472 ## gi|293401808|ref|ZP_06645949.1| conserved hypothetical protein - Prom 173417 - 173476 4.3 + Prom 173366 - 173425 6.4 167 77 Tu 1 . + CDS 173613 - 173825 210 ## COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain + Term 173830 - 173881 10.1 - Term 173619 - 173682 0.5 168 78 Op 1 . - CDS 173883 - 174656 411 ## Pjdr2_0640 hypothetical protein 169 78 Op 2 . - CDS 174695 - 175330 382 ## COG0546 Predicted phosphatases 170 78 Op 3 . - CDS 175401 - 175871 397 ## gi|293401822|ref|ZP_06645963.1| conserved hypothetical protein - Prom 175919 - 175978 3.9 + TRNA 176468 - 176558 60.2 # Ser GCT 0 0 171 79 Tu 1 . - CDS 176850 - 177776 771 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 177913 - 177972 7.5 + Prom 177966 - 178025 8.8 172 80 Op 1 . + CDS 178050 - 178463 287 ## COG1959 Predicted transcriptional regulator 173 80 Op 2 . + CDS 178460 - 178852 387 ## COG1959 Predicted transcriptional regulator + Term 178882 - 178917 1.0 - Term 178871 - 178903 2.6 174 81 Tu 1 . - CDS 179035 - 180063 183 ## PROTEIN SUPPORTED gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 - Prom 180244 - 180303 6.6 - TRNA 180579 - 180652 79.4 # Gly GCC 0 0 - TRNA 180658 - 180733 79.0 # Asp GTC 0 0 - TRNA 180765 - 180840 79.0 # Asp GTC 0 0 - Term 180968 - 181004 2.4 175 82 Op 1 . - CDS 181011 - 181343 256 ## COG2337 Growth inhibitor 176 82 Op 2 . - CDS 181343 - 182329 1155 ## COG2834 Outer membrane lipoprotein-sorting protein - Prom 182400 - 182459 4.6 177 83 Tu 1 . + CDS 182426 - 182617 259 ## - Term 182724 - 182767 5.3 178 84 Op 1 9/0.000 - CDS 182775 - 183806 663 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 179 84 Op 2 20/0.000 - CDS 183803 - 184252 259 ## PROTEIN SUPPORTED gi|114567382|ref|YP_754536.1| ribosomal protein (S18)-alanine acetyltransferase 180 84 Op 3 12/0.000 - CDS 184249 - 184854 600 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 181 84 Op 4 . - CDS 184854 - 185306 597 ## COG0802 Predicted ATPase or kinase 182 84 Op 5 3/0.000 - CDS 185319 - 186539 1019 ## COG2348 Uncharacterized protein involved in methicillin resistance 183 84 Op 6 . - CDS 186555 - 187802 1260 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 187877 - 187936 7.0 Predicted protein(s) >gi|312957022|gb|AENW01000007.1| GENE 1 271 - 753 150 160 aa, chain + ## HITS:1 COG:SPy0572_3 KEGG:ns NR:ns ## COG: SPy0572_3 COG2190 # Protein_GI_number: 15674662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Streptococcus pyogenes M1 GAS # 8 149 21 162 172 125 42.0 4e-29 MFGLKKKSRKVELVSPVNGKMIRLRDVPDQVFASEMMGPGVAFISNDGNICSPCDGELMT VFPTKHAIGIKAENGAEILIHFGIDTVQLEGSCFHQKIDAGNKVKKGDLIIEADIEAILE QGYSIDTPMIITNANEFHVTIHQADAVTVNTAAVISIEKK >gi|312957022|gb|AENW01000007.1| GENE 2 759 - 1604 577 281 aa, chain + ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 279 1 283 285 126 27.0 6e-29 MEVIKKLGNNAAICRDHSGRELIAIGLGIGFPKCPYILDDLSKIDRTFYNVDAEYLSLFE DIDSKIFRISADVIDLAVTMLSVPLKQNAVFTLADHLNFALVRLKNGMIFTTPIANELRD LYPVEVKIAKYTLNLLHKNLNVQLPESEIYAIAMNIINSEETYTRNNQISLTAEFIQEIV KIIEGQMKVSIDTNSFNYSRFASHMQYLFRRKSQYSEISSTNKKLFEVLKKEYPDTFACV LLIKEMIFHKFSWSIEDEESLYLILHVNRLCSHEGVTNESA >gi|312957022|gb|AENW01000007.1| GENE 3 1687 - 3084 1175 465 aa, chain + ## HITS:1 COG:ZascF_2 KEGG:ns NR:ns ## COG: ZascF_2 COG1263 # Protein_GI_number: 15803232 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 EDL933 # 97 456 1 363 392 199 32.0 9e-51 MKKDKALKIAESVLEQVGGKQNIAKVLHCQTRLRFNLKDESIANHEKIEAVQGVLGVVRA GGQVQIVIGPEVKDVYNELCELGDFDNTDREPVSAAKEKITLKSIGNGILDAISGSMGPA IPAIVASAFFKMLTAILGPELLNVIGEGNDLYTLFTFVGDAAFYFFPVIVGYTSAKKFNL NPVMGILMGAILIHPTFVGLVGKPFTVYGIPCNVQSYASSIVPIILSNWVMSYIAKFFDR IVPGAIRSVFAPALTIAAMLPIALCVFGPAGAFIGQYVVDALFSLEGIAGFIGIGLIAAL YPVLVMTGMHMVLITTLFQIFATYGSDGFAAVAVSVSSFSIMGVGIGAFFRLKNKEQKAL ALSYGITAIVAGTSEPTIYGICTKYKKPFIGLLAGGFLGGAYAGLTGVIDATLVPSSNVF AALCFLGGSQANVINGIIACAIAFISTALFVYFFGFNKNEKDIQR >gi|312957022|gb|AENW01000007.1| GENE 4 3145 - 4035 391 296 aa, chain + ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 15 293 27 269 272 142 32.0 1e-33 MINTRLTLPSGAYADTYIMDSEINYREYRKRPAILVAPGGAYAVHATKESEPVAIQFMQM GYQVFVLKYSVGSDRSRPEKGIIKSAVYPLQAVEMLEALHIVKEHADEWNIDKNRIFLMG FSAGGHVCASCGVRWNDPAIVKQLSFRPKKDELKAAGIVLGYPFLVPNSDEFFKKHPLKA VEKVQHIMNYVLYQSDFPSQKDVEKVNLINYISQDTVPMFLWHSIDDPVIDAGNSTRFIS KLLEYGISAEYHLFGHGEHGKALENSLTHKRDEMIDHHLNSWISLADYWMNRIGEK >gi|312957022|gb|AENW01000007.1| GENE 5 4037 - 4927 597 296 aa, chain + ## HITS:1 COG:BH2806 KEGG:ns NR:ns ## COG: BH2806 COG0657 # Protein_GI_number: 15615369 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Bacillus halodurans # 49 288 72 306 321 137 33.0 2e-32 MRKEDYTIFEYRMSKEIKYADLIHNEKMNGIFEKVCVKTKTAGYVDMSIYRPLSWDGKQI LKPVFNFHGGGNVLGYYEQDGKYCRLLADLTGCAIFNVDYVVAPEFKYPKPLFSSYEAIA EIRKRCDEVRIDKEHVVVMGHSAGGYISACLTLIDRDRKELGIKGAILDYPPLRQEIRAE FRKAKDPSKAISENRMLQYINWYYNSFDELNDELASPLLADLHDLPKTLILSAEYDSLKN EEKAYADKMQKAGGDVTYVEFANCRHGFTHEWFDEFMPEESEKAWNMMAAFIRGIM >gi|312957022|gb|AENW01000007.1| GENE 6 4932 - 6236 615 434 aa, chain + ## HITS:1 COG:BH1858 KEGG:ns NR:ns ## COG: BH1858 COG1621 # Protein_GI_number: 15614421 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus halodurans # 6 409 30 457 487 237 34.0 3e-62 MAQKNLNYHVMPRRGWLNDPNGLVYFKGNYHIFYQADENSMDGSVNKAWGHYATKDFQTY TRHATAVSPDSKYDKNGAYSGSAIIRDDILYVFYTGNVKYEGPYDFIHEGREHNVMRVES RDGITFEHKKCLLRNSDFPKDCTRHVRDPKLFMKDGRYHLILGARLKNDTGCVLEYVSDD LESWKYAHRYVPAKDTGFMIECPDYLQLQGEAFLLCSPQGLKKQGYEFHNVYDCGYYKIS NRQLIDYQTLDYGFDFYAAQTFYNADRNILIAWIGMPDNAYIDRYEAWNQTLTMPRSIFF DKRIIQKPIQEILNLRTDRKLYTNDFVIGKSCNIEWDADSDFSLQMNAIRCVYRNHKFTL DLSACSCNRQERCITPIEIRHVSVFIDESVLEIFINEGEYTMTSRFYDDEHSLHVTSENI KRFVTYNMRGFNIL >gi|312957022|gb|AENW01000007.1| GENE 7 6233 - 7171 614 312 aa, chain + ## HITS:1 COG:SA1845 KEGG:ns NR:ns ## COG: SA1845 COG0524 # Protein_GI_number: 15927615 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Staphylococcus aureus N315 # 1 311 1 311 319 246 43.0 4e-65 MKKLLAIGEALIDMIPSNTGRIMDVEGFQPKVGGAPLNVCGAYTALGGESAMITMLGKDA FGEKIVKEIQRFHIHTEYIKQTNAANTSLAFVALDEHANREFSFYRNMGADMLLSEKDIE ESWFEDCYGLHFCSVSLGDFPMKKAHNRALELAKRKNLLVSFDPNVRLPLFDDHEYLRRT IHEYMHFADILKISDEEVSFIFGSDHIEEHVQYIFDSGVKLLIYTAGKDGAAAYTKYNTA YADGIEVKAVDTTGAGDGFIGCLLYHLSKDDIHASDLDGLSEHQLKSYLDMCNKFCSISV TKEGAIASYPSR >gi|312957022|gb|AENW01000007.1| GENE 8 7625 - 9262 1522 545 aa, chain + ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 1 273 3 276 1089 77 26.0 6e-14 MKILDSEIQRFFNTKNWKIALRYHDQDVVDEIVIKESIPGFLYEINAVVNVYGYENHCTV LLNSAGEILDFSCECPYCEQQELACGHIGVVLLIVYDLKPESFPFTYSPLNQREDAFRRY LEQQMLERSRSFIDRYARKDLAKFQANTLLDKVQLHAHAAYDHELTLDFKIGIQRKYVIR SISGFLDAIDRQLEVDYGRQLKFTHHMQAFDEAAQAQINFLKQYVKEHETQYSYGYGSSR KQITIDSKSMDDFYELYSNDATECIDLQFADEDRQEIGLRIDMQEDFFVITTLLSLDQLL RGENRWYYMEDGVLQRFSSELSEQLHDMLEELREDRQILIHKDDMIRFCTYVIPAIREYV HFEGISLDTFMPYPMEIDCYVDLEDNGDISVRLLYHYEDSPSQNAFAPHADSSLELDHIR QYIETYATRLDPDSHIAYIDEHAAYAQAFVKQGLEYLNQMCTVYISDALKQMEAPKKVHM NVGVRMKNRLLELDVTSVDIPRDELYSVLRSYRKKKNITDSKTATSFICNPRVCRKPTSC CSSCI >gi|312957022|gb|AENW01000007.1| GENE 9 9295 - 10878 1947 527 aa, chain + ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 4 513 593 1089 1089 471 49.0 1e-132 MDTFHAFQLDDFAEHSDHVEVMRGTAFHTMMEQLRSVEAGAYPLNPHYDAILRDYQKTGY QWLKTMSAYGFGGILADDMGLGKTLQVIAWLESMHQDHDLPCSIVICPASLIYNWKDEIQ KFAVDLRALCIQGTNTQRQQKIRELHGYDVIITSYDYLRRDYERYDGHTFTAILLDEAQY IKNHTTKNAIAVKQLKGSYRFALTGTPIENSLSELWSIFDFLMPGYLYNYHRFRELFERE IIKNGNEKAQTQLKRMVEPFILRRIKKDVLQDLPDKMEQVYFQEFNAEEKKIYYANLVSI NQDLQKRMQMEEVDKFQVLAMMTRLREICCDARLLYENVTLPSTKLRGCMDLLLNARNSG RRVLLFSSFTSMLELIEEQLRVENIRYLKLTGETKKELRHAYVEKFQNGEADVFLISLKA GGTGLNLTNAEIVIHYDPWWNLSAQNQATDRAYRIGQTKDVQVYKLIMKDTIEEKIMKLQ ERKHILSDTFISSSESSITSMSKDEIMDLFTMEPFVQEADFDEAYAD >gi|312957022|gb|AENW01000007.1| GENE 10 11285 - 12661 1711 458 aa, chain - ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 3 457 10 465 465 655 69.0 0 MRENAWKKYDEAGLKEVFEYCEGYKKYISDCKTERECVSESIRIAETYGYRNLEDVIKNK ETLKSGDKVYANNMGKGIALFLIGEEPMAAGCNILGAHVDSPRLDIKQNPLYEDKEFAML DTHYYGGIKKYQWVTLPLALHGVVVKKDGTVIELNIGEDDSDPIVGISDLLVHLSADQMS KKASNVIEGEDLNVTIGSMPLDGEEKDAVKANILKLLKEKYDFEEDDFVSAEIEVVPAGK ARDYGLDRSMVAGYGHDDRICAYTSMMAQLETESVKRTAVTLLVDKEEVGSIGATGQHSR FFENTVAEVMDRLGEYSELNVRRALKNSKMLSSDVSAAFDPNYAAVNEEKNSAFMGHGLV FNKYTGSRGKGGCNDANAEYMAELRNIMDSENVTFQTAELGKVDQGGGGTIAYILAQYNM EVIDSGIALHNMHAPWEIASKIDIWEATKGYKAFLKHA >gi|312957022|gb|AENW01000007.1| GENE 11 12740 - 13519 804 259 aa, chain - ## HITS:1 COG:CAC3250 KEGG:ns NR:ns ## COG: CAC3250 COG0796 # Protein_GI_number: 15896495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Clostridium acetobutylicum # 1 258 1 255 256 207 40.0 1e-53 MSSIDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSIC AFFISQGVKAVVIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLATQ FTLKEKKFEQLMSRFDEDNTIYRQPCPKLVELVEAGRLEDEAAVNSALREYLKPYDMERM DSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSAAGEVRI YNSLNKEAILKLSRELLER >gi|312957022|gb|AENW01000007.1| GENE 12 14307 - 16184 1162 625 aa, chain + ## HITS:1 COG:lin0325_1 KEGG:ns NR:ns ## COG: lin0325_1 COG3711 # Protein_GI_number: 16799402 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 2 471 1 468 480 249 33.0 1e-65 MLQMTKRQKKLVACLHNHPSEFRRADDLAKDLQLSQRTIRNEIRQINDLFDEPFILSWKG KGYQLNPNNQLPDDVMDVESDSGSRKFHILKQLLSCDQVNYYELADAYYISESTLDKTLQ ELNHIIHTRYENISIQRINSQVQIDCDEKQRRLVYSCFLVHEIQEYDFDIRNYTGFFSSC NILELKSYIVSFNRKHHLGMRDFEIFSFILHIAVMMERIAKGWDINNPKEQAEEKSQKLA EEFYKGLYEQQHIILSSSELNYLALLFSGKISRITSEKIQDYEQFIEDIIRDIKQIYDID LSQNESFRDSLLVHLLGLDARIKTNSFLSNPLIQDTKQHFPLLYDMSVYVASRIQQKFHC ALIEDEIGYLTLHLMNAVEKIQQKLTRKIILITSLGRAQNQYLISRLTNATSHFLIEVIR CVSIFETSQIDELTADLIVSTMPMKLHTDIPIYTCSNFLHDAEIEQILMLLSKEEHPSKR LQQLGQFFDEQLFFTEMDFTSDRDVIRFLCDRLMEAGCCDEEFYDKVIERERIAPTAYGN LFAITHPIEKCAFRNAIAVCTLKHPIVWQSKKVRIIFLFSLCPGHNRDFEDIFEQLVSLL NDVSNVKLLLRQTTLSGFLDTFSSL >gi|312957022|gb|AENW01000007.1| GENE 13 16181 - 16975 572 264 aa, chain - ## HITS:1 COG:no KEGG:SSON_1293 NR:ns ## KEGG: SSON_1293 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 23 249 24 267 280 104 28.0 4e-21 MKICEVTALLEQEGTWVRRNMKTRDHLLFGDDQQEVGRIGICWVASKGAILAAVKQKVNF IITHENPFYQCSTQMHTAAIKAAEEKKRILQEHGISVYRCHDVWDCIKEYGVADQWAFRL GFKFEERIVSSYYQAASIPEMTAEALAHHVAKVLRQDGEQGVYMFGDPQKKIHRIAIGCG AATNLYELLEFYPDAVIVSDDGINNYDAAQYAIDQHIPMIVVNHAGCEIAGCKAMVPWLM RHLHSSSICYLDEGYTIHYYTTNS >gi|312957022|gb|AENW01000007.1| GENE 14 17046 - 18347 1234 433 aa, chain - ## HITS:1 COG:lin0326 KEGG:ns NR:ns ## COG: lin0326 COG1455 # Protein_GI_number: 16799403 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 432 1 432 437 503 59.0 1e-142 MSFATFNEKIEKHILPLANKLSSQRHLKAIRDAFISLMPITLMGGVAAVIGAAPVTEETT NGFLLAWASFAQDNATLLSWINALTLGGMAVYVCIGITYFLTKHFKHDVLMPTMLSVCGF LMLVLTPQQLGWDGKIAEISYMDGRGLLPAIIIAIFTVEAYHFMRSHNWGRITLPPSVPA SLSETFASLVPGFIIISCYVAVYAVFHAFNTTFPGFIYGAMAPSFQAADSLLFTVIMTLL VHFFWFFGIHDAALAGVLGPIRDGNLSINAAAKAAGEALPHVFTTPFWVYFVIIGGCGSL LALAILLVRSKSKQLKTVGRIGILPSFFGIGEPIIFGVPIMLNPFYLIPFLMTSTVNAVI AFTLMKYNIIGRTFAMLSWQMPSLPGAFLSTMDIRALFLIIALIILDIAMYYPFFKAHEK QCVRLEAMEETEE >gi|312957022|gb|AENW01000007.1| GENE 15 18371 - 18661 484 96 aa, chain - ## HITS:1 COG:lin0327 KEGG:ns NR:ns ## COG: lin0327 COG1440 # Protein_GI_number: 16799404 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 94 1 94 96 120 62.0 4e-28 MKKIMLVCNAGMSTGMLAKRIQEASEGTMEVHAYGEAEFINYMDGVDLILVGPQIRHQIP TIEAQVAVPVKAIAPQHYGMMDGKGVYKEIKKILKD >gi|312957022|gb|AENW01000007.1| GENE 16 18679 - 20058 1275 459 aa, chain - ## HITS:1 COG:lin0328 KEGG:ns NR:ns ## COG: lin0328 COG2723 # Protein_GI_number: 16799405 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 1 457 1 454 463 688 71.0 0 MSDKFLWGGASASYQCEGAWNLDDKAESMWDHYLHEEGLENGDIASDHYHRFEEDIRMMK EGGQNAYRFSLSWPRIIKNKAGEINEKGIAFYHRLLDACHTYGIEPFVTLYHWDLPQYWE DCGGWQNEEVCEAFETYARVCFDNFHEKVNHWVTFNEPKWFIASGYLIGNYPPCRQDPQA MIHAAYHVMYASALGVRAFRQGKYPGTIGIVHSFTPVNGVDDTVNTRIAMRYADNYCNNW ILDTAAKGEIPVDLLSELSKTYDLSMIKPAQLQIIKDYTVDFLGLNYYSRTLVKPYTEGE TTFIVNNSGKQGKGSSKVIVKGWFEQVMHDPASTYTEWDTEIYPKGLKDGLLEVKKKYNL PVYITENGIGMYEDVTVKQVEDDYRISFMKDHLQAMHEAMEAGADVRGYFAWSSFDLYSW KNGCEKRYGLVAVDFENGLQRKPKKSYYWFKNMIEQQKS >gi|312957022|gb|AENW01000007.1| GENE 17 20048 - 20371 396 107 aa, chain - ## HITS:1 COG:lin0329 KEGG:ns NR:ns ## COG: lin0329 COG1447 # Protein_GI_number: 16799406 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 2 100 7 105 113 67 43.0 4e-12 MIDTEQYSFQLILHSGNARSTAYEALQLVKSNAFKEGEKKLSIAKEEMVEAQKLHAKLLR IMANQEGELDMNLLLIHAEDHIASSSIAVEMSGELIELYERMENYER >gi|312957022|gb|AENW01000007.1| GENE 18 20596 - 22311 1843 571 aa, chain + ## HITS:1 COG:CAC0028_2 KEGG:ns NR:ns ## COG: CAC0028_2 COG4624 # Protein_GI_number: 15893326 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 81 447 1 361 371 301 42.0 2e-81 MSKHLSMDVRVPIEEGNPAIRRIESLCIKCGQCRDVCQKQISVGHHYDLLKTGDTAICIH CGQCANVCPTGAITEIQDWMQVQSVIQDSSKTVIAITSPSVRVSLGEEFGMQPGSYVEKQ MVGSLRALGFDYVFDTTFAADLTIMEEASELIERIQTKQPLPQFTSCCPAWVKFAETYYP ELLPNISTSKSPISMFAPTVKTWFAEKESLDADDIYVVAITPCTAKKFEIMREELSDAAN YLDRKPGQDCDRVVTTRELASWMRACNLDLESVEESDYDSLMPRGSGAGIIFGNTGGVME AAIRSAYYFLTKKQPQEDLLQLQAVRGLEGVKTAELTIQELPLKVAVVHGTDHARKFLHH IKESGEHFDFVEVMTCPGGCISGGGQTKHIGEDMDTVRKARIQSLYDKDSTITLRNSHDN PHIQQVYEEFYGKPLSDLAEALLHTNYEARNDLQEDPSRYEAMYQADAPVQEPVKEQAAD VRYRCTICGYIYEGDITKESDDYKCPICTVPKDMFEKVEDASAQEPVKEQAADVRYRCTI CGYIYEGDIAKESDDYKCPICTVPKDMFEKV >gi|312957022|gb|AENW01000007.1| GENE 19 22600 - 23520 717 306 aa, chain - ## HITS:1 COG:VCA0593 KEGG:ns NR:ns ## COG: VCA0593 COG0618 # Protein_GI_number: 15601352 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Vibrio cholerae # 2 286 7 291 310 247 47.0 2e-65 MRLLTRSDFDGLACAVFLKEAGVIDHWKFVHPKDLQDGLVEVTREDCLANVPFVEGCGLW FDHHSSEDERNAAYKGKYRGESRTSPSCAHIIYDYYGGRERFPGYDDLLEAVDKVDSANL SIDEVLHPNDWILLGFIMDPRTGLGRFHDFRISNYALMEEMIDWCRTKDIHEIMAEADVR ERIELYWDQNDKFIDMVKAHTTVENRIIISDLRGVNPIYTGNRFLIYSLYPDANISVWIV NGKGGKGCSAAVGYSILNRTCTIDVGALMLKYGGGGHRVVGTCQFSDDTMEEKLEELLKD MKRLND >gi|312957022|gb|AENW01000007.1| GENE 20 23904 - 25154 1523 416 aa, chain - ## HITS:1 COG:ECs3807 KEGG:ns NR:ns ## COG: ECs3807 COG1063 # Protein_GI_number: 15833061 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 415 1 416 425 447 49.0 1e-125 MKTKAVRLYGVDDIRLDEFELPEIKDDEILVKVVSDSICMSTWKTVKQGANHKRVPNDVA DHPIIIGHEFAGDIVQVGKKWQDNFQPGQKFAQQPAIPGQMESPGYSYAWCGGDTQYCIF PNDIIEAGCLWTFEGDGYFASSVAEPVSCVIGGYHTNYHTVPGTYQHVMGTKKGGNIIIL GGCGPMGLGAISYGLTFENKPKRIVVTEINDERINRAREVISEEEAAAHGVELIYVNTAT MQDQVKELMALTDGKGYDDVFVYIPNRAVCEMGNSIMAYDGCMNLFAGPTDMKFSSMINL YDCHYSRSKIIGSTGGTIDDMKEAIEKEAQGLIKSAVMITHVGGLDSVVETTKNLPDVPG GKKLVYTHINMPMTAIDDFAKLGEQDPFFKELDAVCKKNRGLWSAEAEKMLLEHFR >gi|312957022|gb|AENW01000007.1| GENE 21 25156 - 26094 1300 312 aa, chain - ## HITS:1 COG:CAC0232 KEGG:ns NR:ns ## COG: CAC0232 COG1105 # Protein_GI_number: 15893524 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Clostridium acetobutylicum # 1 309 1 309 309 213 37.0 4e-55 MILTVTFNPAIDKTAEVDELIPGGLNRLRNVMQDAGGKGINVSKTIYALQGKSVATGFLA GSAGEYIRKVLNGLAIDNDFVWVEGMTRTNLKVLDHEMELTELNEAGPVITETEIKQLKD KILSLLHPNDFVVLSGNVSAQVRKDIYRELIELVKQQGARVILDADGELFAQGIQAKPYV IKPNKYELATYFGVSQDCSNEEMISLAKTLLNEECRLVVVSMGKQGSIFLSHEGIYQAEA LHIQAHSSVGAGDAMVAAIAYALEQDTPMEQLIALAVACSAGAVMTKGTQPAEKAVVEKL MKQVTIKKLEEN >gi|312957022|gb|AENW01000007.1| GENE 22 26091 - 26858 744 255 aa, chain - ## HITS:1 COG:STM3685_2 KEGG:ns NR:ns ## COG: STM3685_2 COG4668 # Protein_GI_number: 16766970 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Salmonella typhimurium LT2 # 117 255 3 145 145 103 39.0 3e-22 MGLFHKHKERAVLEDLHICFVCDAGMGSSAMAAGQLQKKLKAHGISCRVKNCAIDEVAPD AEILISHHNFAQRIQKQFPTVRYYSVQGFMNDEEYENIVEDIMIFRKKKEEKKNNILEKS NILLNCRADNSDEAIVAMGKLLQGAGYIDEGYIQGMLNRDHSLTTYIGNDIAIPHGEYEV KDCVKKTGIAVMIYPDGIRWADGRVRIVIGIAAKNDDHMAILANIAEKLGEMEMVEKVVA GDVDTVYEILAGDAA >gi|312957022|gb|AENW01000007.1| GENE 23 26872 - 28977 2381 701 aa, chain - ## HITS:1 COG:BH3853 KEGG:ns NR:ns ## COG: BH3853 COG3711 # Protein_GI_number: 15616415 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 7 696 1 697 700 241 30.0 3e-63 MSYPKGMIYSSRLKKILQIIIETDGYVKVEELAKRLKTSSRTIFRELRHIDDELKEYHVR LVSKAGMGIHMEGSYEDKEALRQELNTEQIQYLNKEERQHLLIFELLRSDEVQKLLHYGA LFQVSEATISNDLDSIEPWFRQHDLSLIRKPGVGVGVQGEEAVLRKAMTQLLQEDLQSKE SYESVNFLDSQTLLTEIFLHQDAGILNMLNQDILKRILDVFQTNQHELNLDRYAQASYIG LIMHLVIAIERILKNEELKDGGDVVAMVQEDASYQQAQQMAHVLELEFDIDIPDVEIAFI ALHIRGAKISRVEYDSLQDEPARQLRDVLYAMLQTYDEEKRYLLLEDEELFQGLLTHLSP TITRLQHDLPIYNPLLSQIQTEYRELYEQTKQACRVLENYCGVSISADETGFITMHIGAS LERMQHTAIHRRVIPIGVVCASGIGVSAMLSARIQKSFHPDVRLQIFSMEDVQRHAYDDA ELLVSTFSLDVADREVIVVTPLLNQQDIHNIRTALTCRQELSEPIQKAVQPVSEFREQLR LLHTISEESLLLLDHIRLHISDSDTLSQLLIESAEYIGKNAAAVEQIRADLQKRESMGPV IMQDLQFALLHAATSAVDTMEILLQYPRHAWSAEAKNLKFAVVMLVNTQAGRVRKELLSL FSRGLVESETLLEAVCTQDIERIEEALSQLIMEYMDTAVAL >gi|312957022|gb|AENW01000007.1| GENE 24 29035 - 30399 1637 454 aa, chain - ## HITS:1 COG:PM1061_1 KEGG:ns NR:ns ## COG: PM1061_1 COG2213 # Protein_GI_number: 15602926 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Pasteurella multocida # 2 453 16 468 490 491 58.0 1e-138 MKENVQRFGRFLSGMVMPNIAVFIAWGFITALFIPTGWMPNETLAQMVAPMQRFLLPTLI AYTGGKMVYDVRGGVVGAAAAIGILAGTEDPMFIGAMIAGPLGGWLMKKVDGLFAGKIPA GFEMLVNNFSAGILGALLAVFGCLAIEPLCVGIKDVLVICVDFLVKRSLLPLTSLFVEPA KILFLNNAINHGVFTPLGMDQVAEAGKSIFFLIEANPGPGLGLLLAYSFFGKGAARSSAP SAVIIHFLGGIHEIYFPYVLMNPLTVLAVMAGGMSGVFINSIFNSGLVSAASPGSIIAIL GMCAKDSYIGVILSVIVAAAVSFVIAAFILKFSNKNTDDNALEEASAAVSSMKSEAKGAK PAGTVSKIVFACDAGMGSSAMGATTLTKKLNAAGMKVTVEHFALDDVPKDTQVIVTHKSL VERAETRCPNALIFPITNFMGGKEYDEIVAQLTK >gi|312957022|gb|AENW01000007.1| GENE 25 30746 - 32173 1716 475 aa, chain - ## HITS:1 COG:FN0944 KEGG:ns NR:ns ## COG: FN0944 COG0534 # Protein_GI_number: 19704279 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 6 455 3 452 455 322 40.0 1e-87 MEQTMKEIRTKNPLGYQPIGRLLMKFAIPSVISMLVNAVYNIVDQIFIGQGVGYLGNAAT TVAFPIVTIILAVGTMLGAGGSAYAAIKLGEKKEEEAENTLGNVFILLVGIGIVLTVIGL VFLDPILTIFGATPKNMGYAKDYASIILLGTVFNLLGIGLSNMARCDGSPNVAMYSMVAG ALLNCVLDPIYIFVFHWGVQGAAIATITSQIIATIILLYYFTRKGNMRLRLTHTRLNPTI CKMAFSLGISSCITQLSSTILQIAMNNSLVYYGNQTSVTGDVALSAMGIVMKISMIIVSI CIGIGIGAQPILGFNRGANQPKRIKRCYRLASNIATAVTTVGWAMFMLIPHIILMLFGSA DANFTEFAIKAMRIFDLGVFCAGFQVTSTSYFQATGQPMKASILSSLRQLVLLIPLILLL PLHFGLDGILYAGPIADITSAVIIFFFIHHEMKKLDVQIVQESGEELGVYSEPIA >gi|312957022|gb|AENW01000007.1| GENE 26 32190 - 32615 466 141 aa, chain - ## HITS:1 COG:MA0180 KEGG:ns NR:ns ## COG: MA0180 COG1846 # Protein_GI_number: 20089078 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 4 129 21 146 156 86 34.0 2e-17 MAHISKNASIVYRSSQAFFDETLAPYQIGCGQQFFLMRIYEQPGISQFELAETGSFDKGT CARAVKKLEELGYLRRETRSSDRRSVQLYLTGQGEQLVPVIQGMLLEWNAILCRTLQADE KEQAERLLDEIAGNAAAYIKR >gi|312957022|gb|AENW01000007.1| GENE 27 32760 - 33158 350 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNPKFTPSKTVRDVIQFDKEHKQLRFLMDEEKVIPYREISSCSLKNQYYKKSSVSQLANL FTINGILASENQELRVCIEVKLKDDTRVYGYVSRDIIRPNLSPYHEDVATGRYILKLIRK VIAREQQTASAA >gi|312957022|gb|AENW01000007.1| GENE 28 33446 - 33928 418 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223985514|ref|ZP_03635571.1| ## NR: gi|223985514|ref|ZP_03635571.1| hypothetical protein HOLDEFILI_02877 [Holdemania filiformis DSM 12042] # 1 152 1 151 161 156 47.0 4e-37 MCGEFDLFVDRVDPRYQSHVSEIHSELMKRGCRLEMKTAKSGFVVSYIRKDTKRTLATFV QRKSGIKLRVFADHIAEFQELLNAFPRRMKTEIRKASVCKRLLDPNDCNPRCRMGYTFVM EREQYQKCRYMAFLLTLNEESHPYILQLLHKELDRVDSES >gi|312957022|gb|AENW01000007.1| GENE 29 34479 - 34850 392 123 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEFIVSKRMKDVVEFDKTNKKLRFLLDEGDQVYYYKDLETIGISCEYHHNLKKALAHNL VFPTYAEGRQFVRVGIRMKVRMGQSVFVHVSEDIVDKGTLQYHEDMRTAREIVSLLKKCR AKA >gi|312957022|gb|AENW01000007.1| GENE 30 35191 - 36498 1523 435 aa, chain - ## HITS:1 COG:CAC3014 KEGG:ns NR:ns ## COG: CAC3014 COG0422 # Protein_GI_number: 15896266 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Clostridium acetobutylicum # 2 435 3 436 436 577 63.0 1e-164 MYTTQMDAARQHIITEEMKAVAAYEQMEEAEVCRLVAAGQVVIPANRHHTCRKSYGIGSM LKTKINVNLGTSRDCLDLDMEMEKVRHAVQMGAEAIMDLSSFGDTQTFRRKLVAECPAIL GTVPIYDALVYYHKALKDITAQEWLNVFRMHAEDGVDFMTIHCGINRQTAQRFKQQKRIT NIVSRGGSIMFAWMEITGNENPFYEYFDEVLRICREHDVTLSLGDACRPGCLEDAGDIAQ MEELVTLGELTQRAWAQDVQVIIEGPGHMPLHQIQANMELQKTICKGAPFYVLGPIVTDV APGYDHITAAIGGAMAAAYGASFLCYVTPAEHLSLPDVDDVKEGIIASKIAAHAADIAKG VKGAMDWDHQMAVARGNLDWERMFALAMDPDKARAYRAQSAPEREDTCTMCGKMCAIRNM NKLLRGEIVDIMEED >gi|312957022|gb|AENW01000007.1| GENE 31 36859 - 38421 1325 520 aa, chain - ## HITS:1 COG:SP1282 KEGG:ns NR:ns ## COG: SP1282 COG0488 # Protein_GI_number: 15901142 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 515 12 519 519 271 32.0 3e-72 MLILKHLTIRDSKHHTLINDLNYSLGNDDKVGIIGEEGNGKSTLLKAVYNRNLIEDYAAV SGEIDTDYKEIGYFEQQLSSQWEDAFLFDYLLKEKSEDEIQPERYNDLQGCETLCAQLGL KNELLYGEQRIGTLSGGEKVKLQLLKLMLRKPKLLLLDEPTNDLDIQTLQWLEDFLKNLH IPVLFISHDEILLSRCATVILHLEQLNKKTQCRHTIFHGNYEEYVKQRCSRLKKEAQEAS AQRREYRRKKEKLNDFMNAVHDAQNDTVRSPFYAAALKTKMRNLKAQDRRLEKEGYAHVD SVEEAIDVFFQCEGFPKSRRILEFHLEELKTDVSTLLQDIHITLYGRQKTVIAGENGCGK SLLMKEIHKVLKSHTDIRLGYMPQNYAEAFSAKDTPVTFLLEACDRDDITRARELLGRMK FTREEMEHSVYQLSEGQKAKLYLLRFIKQGCNVLLLDEPTRNLSPLTSPVIRRILKDFPG CILAVSHDRLFIQEVFDSVLYVAQGELQVLETEQFMEALG >gi|312957022|gb|AENW01000007.1| GENE 32 38810 - 39352 323 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425883|ref|ZP_03908949.1| acetyltransferase, ribosomal protein N-acetylase [Atopobium parvulum DSM 20469] # 1 176 1 179 182 129 38 1e-28 MLETKRLILRPWQVEDAESCYRYAKNPNIGPKAGWPVHESVENSREIIRTVLSAPNTFAV VLKETMEPVGSIGLMIGKQSNLAIADDEGEIGYWIGEPYWGQGLIPEAVKELMRFGFEDC QLKTLWCGYFDGNEKSKRVQEKCGFHYLRSEVREWTLIQQTLTEHILYVTKAEWEKKRIA >gi|312957022|gb|AENW01000007.1| GENE 33 40016 - 40567 308 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425883|ref|ZP_03908949.1| acetyltransferase, ribosomal protein N-acetylase [Atopobium parvulum DSM 20469] # 1 149 1 152 182 123 40 7e-27 MLETKRLILRPWQVEDAESCYRYAKNPNIGPKAGWPVHESVENSREIIRTVLSAPNTFAV VLKQNMEPIGNISLMIGKQCNLTNAADEGEIGYWLGEPYWGQGFIPEAVQCLIRYAFEDC CLKKLWCGSFEGNHNSRRVQEKCGFHYAGSEVREWPLLQKTLTGHIMSLTIEEWKHSTGT ETN >gi|312957022|gb|AENW01000007.1| GENE 34 40918 - 41712 642 264 aa, chain - ## HITS:1 COG:TP0797 KEGG:ns NR:ns ## COG: TP0797 COG0345 # Protein_GI_number: 15639784 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Treponema pallidum # 4 255 2 256 263 196 42.0 4e-50 MKQNIGFIGFGNMAQAMADGMLASGIVKGEQLYACARQWDKLCRNTEVRGMHACKHAIDM VRQCDIILLAVKPAQMSEAISTVKEHLQGKAVVSIAAGMFFETYEQLLPPHTQHLSVIPN MPVSVCEGVMLWEQRNSLQTEEAVAVEQLFSAIAFIEKLESDQMTIGATVAGCGPAFAAM FIEALGDGAVAYGLGREAAYRLCAQMMAGTAKQLLVHPQHPGQLKDRVSSPKGTTIQGVA ELERLGFRNALISAIERIEQFRLK >gi|312957022|gb|AENW01000007.1| GENE 35 41791 - 42054 229 87 aa, chain - ## HITS:1 COG:no KEGG:Amet_3815 NR:ns ## KEGG: Amet_3815 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 1 85 1 85 88 110 64.0 2e-23 MEERYCQCCGMPMGDTKELYGTEKDGSRSVDYCKYCYEHGAFTSDCTMEEMIEFCVPVMV KENPGMSEDKAREMMTQYFPTLKRWMK >gi|312957022|gb|AENW01000007.1| GENE 36 42133 - 42600 403 155 aa, chain - ## HITS:1 COG:L50174 KEGG:ns NR:ns ## COG: L50174 COG0454 # Protein_GI_number: 15672030 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 9 153 3 146 149 95 35.0 4e-20 MESRNHVKLRTFQEKDFAEVLRLFYDTVRNINSRDYTTEQISAWVLGVKEKRMKSALLAH TTLVATSNQKMVGFADMDETGYLDHLYVHHQHQKQGIATMLCDLLETETSSPTLSVHASI TARNFFLQRGYRLIYAQQVERQGQLLTNFYMKKEK >gi|312957022|gb|AENW01000007.1| GENE 37 42826 - 43680 763 284 aa, chain - ## HITS:1 COG:lin0986 KEGG:ns NR:ns ## COG: lin0986 COG0842 # Protein_GI_number: 16800055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 4 284 1 282 284 172 35.0 9e-43 MISLIKRNMLLFFKDKTSVFFSFMAVFVVLGLYVCFLGDMMIQPLKQDFPDTARELSDTW IMAGTLGIVSLTTSLSVLGIIIEDKSRSILNDFYIAPISQMKVTGAYLISTICITFLVSV VTLIIGELYIVAYGGSFLTLSALLKVLACMVLSILACTAMLFFFMSFFKSATSFSNVTTI IGTLSGFLMGIYVPVGALPKLLQTVISLFPPSHCAALFRNIMMDDVLTKTFQSIPPEHLT AFKKQFGLVYSYGGHTTDTLDHILIIAGMGLLFFLLQYVRQNRK >gi|312957022|gb|AENW01000007.1| GENE 38 43677 - 44588 371 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 300 1 303 305 147 30 3e-34 METSIRVEQLCKSYQGTTVVKNISFQVNKGEIFAFLGPNGAGKSTTISILSTLLKKDSGT VIINGFRLGQEDERIRSGIGIVFQNSVLDELLSVKQNLILRSALYHLPYKQACRRVQKLC DICDLHDIMHQPVGTLSGGQRRRCDIARALIPEPEILILDEPSTGLDPKARKQLWDTISA LHKERHMTVFMTTHYMEEAEIADHLCIIKQGNIIFDKPMKEVHKQYAAEQLLLYPASKAQ LIAELNRHHIPFHEQNEALCIHTGGMLKTMSVLRLCERYIQRFENHPGNIEELYLQMLQE EQV >gi|312957022|gb|AENW01000007.1| GENE 39 44908 - 45333 371 141 aa, chain - ## HITS:1 COG:no KEGG:Dalk_4241 NR:ns ## KEGG: Dalk_4241 # Name: not_defined # Def: hypothetical protein # Organism: D.alkenivorans # Pathway: not_defined # 2 140 4 154 156 95 36.0 5e-19 MKINISTIIEAIEMADDNFTFFLDLETGKSVLLADELSTGMDNEGLENEIEDNPERFFRL PTKFEIHEYNIMEEFIQTLKGEDADKLEQVIQGRGAFRRFKDMVNRRGITKQWYDFQADY YRNLAIAWCQEHGIEYVENCM >gi|312957022|gb|AENW01000007.1| GENE 40 45917 - 46288 200 123 aa, chain - ## HITS:1 COG:no KEGG:smi_1700 NR:ns ## KEGG: smi_1700 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 123 1 123 123 207 92.0 9e-53 MSCHSIGHGLNSVSKKVLELYDEGKFEFSLAKDLLYTTRNAVHYCDGNTYEAIGCFDGCR CARCLKKTNDLYGLYDVLDECSEYYDIFSNKEDGVLSGDLCKDCFDEISEKYHSIIREDE VVY >gi|312957022|gb|AENW01000007.1| GENE 41 47170 - 47385 140 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255282322|ref|ZP_05346877.1| ## NR: gi|255282322|ref|ZP_05346877.1| prophage LambdaSa04, site-specific recombinase, resolvase family [Bryantella formatexigens DSM 14469] # 1 52 94 149 710 63 57.0 3e-09 MIEDGLEGKFDYIITKSVSKFARNTLDILKDVRELRKHNVYFDKEKIDTARADSFEKYKC EIGHESKDETR >gi|312957022|gb|AENW01000007.1| GENE 42 47452 - 47616 124 54 aa, chain - ## HITS:1 COG:no KEGG:smi_1701 NR:ns ## KEGG: smi_1701 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 54 1 54 83 78 88.0 6e-14 MIHVEKIPVKNKKKEVVRIAVYCRVSKNVEEQRSSLNIQIAYFKELSNKVIEID >gi|312957022|gb|AENW01000007.1| GENE 43 47996 - 48601 398 201 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295094567|emb|CBK83658.1| ## NR: gi|295094567|emb|CBK83658.1| hypothetical protein [Coprococcus sp. ART55/1] # 56 122 1 67 95 67 47.0 5e-10 MEYTNNEKHVLSLMDRTDFKNLSKIDILSYASKLNELRPEVAQQVLAQFPELAKLIQATM VEYQGILEKIVASDDESTKQVYAILNKEIDAASESRREFIEYADKVRADLSKCLDNPNLT PEQQKDVIDRQMEIFHAVDKKDTEIREQEMKSACMADKKDTEKKEFNWKIISAASFVLMT AVGIGTAALGGKFDIKLLKKQ >gi|312957022|gb|AENW01000007.1| GENE 44 48701 - 49645 396 314 aa, chain - ## HITS:1 COG:NMA1039 KEGG:ns NR:ns ## COG: NMA1039 COG3943 # Protein_GI_number: 15793995 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Neisseria meningitidis Z2491 # 7 313 3 327 336 285 48.0 1e-76 MDNYGEILIYQSDDGLTNIEVKVQDETVWLTQQQMADLFRTSRTNVVEHIKHIYDEGELD ENSTCRKFRQVRKEGNREVAREMPFYNLDMIISLGYRVKSSIATNFRRWATERLKEYMIK GFTMDDNRLKELGGGGYFKELLERIRDIRASEKVFYRQVLEIYATSIDYDPKAEVSIQFF KKVQNKIHYAVSGETAAEVIYHRADAEKDFMGLMSFSGEQPTLKEAKIAKNYLDEKELRS MGQLVSGYLDFAERQAEREVPMTMEDWAKHLDGILTSTGENLLTGNGTVSHLQAMEKDYL ESIKLLEQKGKQQK >gi|312957022|gb|AENW01000007.1| GENE 45 49658 - 49870 353 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291526893|emb|CBK92479.1| ## NR: gi|291526893|emb|CBK92479.1| hypothetical protein [Eubacterium rectale M104/1] # 1 69 38 106 106 98 75.0 1e-19 MLKNNIEVDVKVKCIESGMTQAQLAEKIKTTSPYVNRIIKKQDGVVNKTFVQMLEALGYD IELTYVKRED >gi|312957022|gb|AENW01000007.1| GENE 46 50245 - 51123 263 292 aa, chain - ## HITS:1 COG:no KEGG:Teth514_1217 NR:ns ## KEGG: Teth514_1217 # Name: not_defined # Def: hypothetical protein # Organism: Thermoanaerobacter_X514 # Pathway: not_defined # 2 292 4 296 299 373 69.0 1e-102 MRGKSINLFLMDGEPNGRMKCTLANWTGVAYKIPRTKLDSCKGRDDLSQSGVYFLFGISD QTGENVVYIGQAGVRKNGEGILYRLQEHKRNPEKDYWTETVVFTTSNNSFGPTEISYLEN RFTNIAKETERYVVKNGNDPTPGNITEEKESELEEFIDYAKIIMGTLGHKVFEPLTDSKT MVAPNSDSAESDNKIFYIRRSGADAKGKLTSEGFVVLAGSKIRADIVPSCPDYVKTERKN NKDNIDENSIIKNEILFKSPSSSAAFVLGASANGNIEWRTDEGKILKDVENS >gi|312957022|gb|AENW01000007.1| GENE 47 51806 - 52852 834 348 aa, chain - ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 6 348 3 345 345 286 45.0 3e-77 MKKKKDEITIRSSAAEYLTYVASVGDQQDSIEMRYEDENIWLTQKMMATLYDVDVRTINE HIKKIYSDSELEEEATIRNFRIVQTEGSRQVTRDTKHYNLQMIIAVGFKVNNERAVQFRK WANGIVKDYTIKGWVMDDERLKNGGSVLTTEYFDRLLEQIREIRLSERRFYQKITDIYAT ALDYDRTAKTTKQFFAKVQNKMHYAVHGHTAAELIYERADADKPHMGLTTWAAAPEGKIV KSDVSVAKNYLSEKEMRSLERIVSAYLDLAEDRAERHIPMTMEDWAKRLDLFLMADDREV LQDAGKITAEIAKAKAETEFEKYRVIQDRLFMSDFDKYMLELEENAKK >gi|312957022|gb|AENW01000007.1| GENE 48 52917 - 53657 225 246 aa, chain - ## HITS:1 COG:no KEGG:MXAN_4131 NR:ns ## KEGG: MXAN_4131 # Name: not_defined # Def: hypothetical protein # Organism: M.xanthus # Pathway: not_defined # 15 219 230 438 438 82 26.0 2e-14 MKYLIDFLNSHDGFHLEELQELIYKVYDEFMGVYQRLIPALAIQYCKDNSFDFKYEGSTT SSFDSVKQFYLDVYEALGNLMIIPVALNNIKYRSDINAMNPIEKNVKSLEDYIKLTKASR YHFCLDSEDYTGFLKILVNAKLRNAIGHNDVEYNSVDQLITYIPNPKDRTKKKTEYLLEF ENEAMCMFQAILGVSEYLYRLRELELMHDGKIPIMVQERANWPKKIGRNELCPCGSGQKY KRCHGR >gi|312957022|gb|AENW01000007.1| GENE 49 54290 - 56110 1044 606 aa, chain - ## HITS:1 COG:YPO3437 KEGG:ns NR:ns ## COG: YPO3437 COG1479 # Protein_GI_number: 16123585 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 601 13 626 636 373 35.0 1e-103 MKKIEGSPKNLKQLLQNTKYSIHYYQREYMWQRKHIEELIDDLTSEFLEYYKTDDPRQAV ADYGAYFMGSIVLAGRENAIIDGQQRFSSLTLLLMYLNNRLKTIGQSYNMIETMIFSESF GTKSFNINVDDRQECMNAIFNDTDFDTTDAGESVKNLYGRYQDIQDVFPADITDDMLLHF CDWVAEKVFFIEIVATTEQDAHKVFVTMNDRGLSLTSTEMLKGYILSEIKSDSSREKMNG IWKDKVLTLKKDDDKGDETFIKAWLRAHYAETIRETKAGAVNKDFDIIGGSFHKWVRDER DKLGLNDSDDFELFIKKFARFAEVYELIRKAETTFAEETKYVYYNAQVNFTLQPQLLLAP VCYEDSWPVIVEKINLVARFIDVLIVSRVTNYRSVDYSTIKNFVFNVTKDIRMTDIFTLK QKLEQQYINLAFDPAAALGDLRLNSFTKKYIKNILARITGFIEEQTGVASNYCNYMNTQT KNPFEIEHIITDHYEWFTTEYSDQDDFKRWRNSIGTLLLLHKSINASLNDAKYDYKLKKY CSNEGNIYTESLGDLAYQNNPKFKKFVLDNNLDFKSYASFGKNEITERIAVLIDLVKLVW NDDMFM >gi|312957022|gb|AENW01000007.1| GENE 50 56110 - 58758 595 882 aa, chain - ## HITS:1 COG:VNG2213G KEGG:ns NR:ns ## COG: VNG2213G COG1204 # Protein_GI_number: 15791037 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Halobacterium sp. NRC-1 # 164 544 40 404 779 97 27.0 8e-20 MKNSEITFGEVFFENIENNEYLIRLYEDILYNYAIKVFGYNRRLKKNLPINDALRFADIL SKSNHSTKADKHKVWAQEIVTMLNFIYPDNEDVSYVAGSVLTIVGNYQGRNIIKSEFDGS DAMEKLFLEYKKKFYTIPSAPDKQFMVAQKSAYDHFENSYYSYSAPTSMGKSFIMRMFIK EEILSDCKHNFAIVVPTKALINEIRIKITKEDLGEILHQKNYHVVTAAGDAALSNWKDKE RNYIFVMTPERMLYLMINEPDIQIDYLFVDEAHKITGADKRSPFYYQVVNMLSERMHRPH IIFASPNVPNPEVFLDTIPDVQSANEHKLQTSFSPVSQPKFIINLINREVSIYNEHNDSN IPITSIALDDADLIDVLLRFEKDEMKKERPFIVYFPSTRKTVVAARDFGANRIPKTNCQE LMELAKDIKNEVHGDYYLADLVSKGVAYHIGYLPASIRQRIEELFKAGKITALFCTSTLV EGVNLPADNLFITDYRNGQKDMRPIDFRNLVGRVGRLEFNLYGNVFLVATSEKASDKFET LLSKPVDKQTLSIEKGLTKPQKQNVINVLLQGDVEFPKHPQKQTEDSYDLMRKFAIILLN DIMANRESRVRKEFQKVMNPGDEDLIKAKFSNRQQHMRDSDITVSVDQSESLYEAIANNG LEFPAIDSNGRYNADELWAFLLRIAKIFKWKSYESYTLGAPGNDPDKYSSLSYYRVILGQ WVSGHGLQQIISEAIRYKKNNPHEAMFIDGKKVDYKEGSEHNNIIISEVLSVIDKIILFK LSNYFLKISNAYKDIKGKPAPNDWYEFVEYGSTNKRSIEIQKYGFSRESALYILQHEAEY VYKSETELKLKKSLLECLNKGVKADAELAWYNTPELFLEEDA >gi|312957022|gb|AENW01000007.1| GENE 51 58758 - 59666 198 302 aa, chain - ## HITS:1 COG:no KEGG:CLM_2299 NR:ns ## KEGG: CLM_2299 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A2 # Pathway: not_defined # 14 299 11 299 300 109 27.0 1e-22 MSSIDINTTIKAGTIDSVFKEVTHSESLGLRNAAQLRLFHLKLDGDTFTNDGLYKCLRRN IGYYVYSRSRIAKFKREDDEASINLEAMQLVKEQCQKAPEHFGNMLGEILLYAFFEEKLE APKIFSKIELDTLTTDTIYDGVHLLKIDDESFQMVFGTSNVENQIDAAIDNAFSKIQAGL NQPKKGIPLVSELIFAQNADSVLADKLEKIITPSPDAPEVDSAYGIFLCYSLGLSKENRT VQEYKNLVEQKMVSDIKYSLPKIKKYITDCGLSSRSFYIYAVPLDDATEDKTTIMKKVTG GV >gi|312957022|gb|AENW01000007.1| GENE 52 59678 - 62947 1095 1089 aa, chain - ## HITS:1 COG:XF2739 KEGG:ns NR:ns ## COG: XF2739 COG0610 # Protein_GI_number: 15839328 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 10 1047 18 1049 1058 466 30.0 1e-131 MNYFFEKGKFTEEQLEQAIIELFQLQGYTYVHGENIHRQYDDILLEDDLYSYLLSQYKDL SDVELKKIIQKIELIQSSPLYAGNRETFWLVNEGFDLQRDDISKVAMHVNYIDYDHPENN IFKVVNQYSVQGTRLRRPDLLIFINGIPVTICEFKSAINEDTTIHDAWEQITKRYTRDIP KLMKYCFLSVISDGANTRLGSIFTPYEYYYSWNKANDTDTVANGISSLKTMIEGAFAPER ILRVLRDFIFYPDDSKKNEAIVCRYPQFFAANKMLVNIKEHMRPEGDGKGGTYFGATGCG KTYTMLFLSRLIVQRDNETFNNPTIIILADREDLDTQTSELFVTATKYLHESDVRSIESR KDMEQTLKDRPSGGVYITTIQKFCESTGLLSDRSNIICISDEAHRTQTSTGSKLKKTDKG VFTTYGFGHYLRASFPNATYCGFTGTPIDETLAVFGNIVDSYTMKESSDDGITVRIAYEP RLARVVLSDEQAKEIQKYYEQCAEQGSTEEQIEESQRAMSKMTAILGHPERVKKLAADIV QHYESLCAEKPEIVQKAMIVCADRALAFRVLKEIVSIRPEWGEAKKAEDESQLSKEELDK LMALPKVNLVATQGQNDEKDLFEACGTKEYRKKLDKQFKNNNSNFKIAIVVDMWITGFDV PSLAVMYIDKPLQKHTLIQTISRVNRVFDGKDKGLVVDYIGIKTDMLEAIKKYGGPQESP IDELNISLGIFRNHLALISELLVDFDATKFHTGTPLERLNCLNAAAEYVQIKKEMQTRFM GLSRRLKSAYVICFPSGELTEEETATAQFYLAIRSIIYKQTQGNAPDAEIMNRAVEDMVK EAITCTGIENIIDDQKSVDLFSDDFLAELDSVKMPITKFNALLKLLRKAISAYGRTNKVK AVEFDERLRKVVDAYNNRDKLVFTSEVVADFVNDLSDELIRILQDLQQDKTSFEALGISY EEKAFYDILVKVRDDHGFPYEEGKCLLLAKKIKELVDDKAQFADWSTRDDIKNQLNMDLT VLLYKNGYPPEWDEEVFEKVMEQAENFKKYADVSSDVPEPVAKIYKYENVSNDSLKVAEE RTPYGVKKN >gi|312957022|gb|AENW01000007.1| GENE 53 62959 - 63861 240 300 aa, chain - ## HITS:1 COG:no KEGG:Swol_0509 NR:ns ## KEGG: Swol_0509 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 177 299 306 426 432 122 51.0 2e-26 MLFTERHGIRAPIEKTYLISLEMYSLLFECCNKYKKNLTNLFPLYCHHDFTDSDYLAFDE KGFINRIKVRIPALFKNEYGTICTPTVEDDYDQYALIDYIEFFAQNIMDISENWNNDRYR NYRYIDCLKTKDVFIEFKSAINELFIESGLLYTLTDEAIVERIVENSPLTKQIENRFSTV KEKGIRDLLKDAIALYKTPNPCARQDSVEKIWDALERLKTYYISLDKKKSAMKIVEDMSG GSEDFKELFNAEFKVLTDIGNHYRIRHHETDKIDIIDEKYYDYLFNRCLSLIALSVQYLQ >gi|312957022|gb|AENW01000007.1| GENE 54 63875 - 64126 167 83 aa, chain - ## HITS:1 COG:no KEGG:VCD_001189 NR:ns ## KEGG: VCD_001189 # Name: not_defined # Def: hypothetical protein # Organism: V.cholerae_MJ-1236 # Pathway: not_defined # 1 75 106 180 424 79 46.0 4e-14 MLFGRGEFDRYARFHSWGSTRETFDWNEMCDVEIPIPDVSIQRDIVNIYEAYIDRREINE KLKAQIQSICPILIKGSIEEART >gi|312957022|gb|AENW01000007.1| GENE 55 64992 - 66608 883 538 aa, chain - ## HITS:1 COG:XF2742 KEGG:ns NR:ns ## COG: XF2742 COG0286 # Protein_GI_number: 15839331 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 5 536 8 518 519 353 38.0 5e-97 MARATKTKKEVEVSLETVLWNCRVALRGVGTTEKNRDAVIGLVFLKFAGDKFEKRRKELL DQYGDISAFLEKPSFYNAVNVFYLKETARWSYIVKNASANDIAIIIDQAMADIEESNPPL KGALTLNLFATLGADKAKIKDLIDNVNQIDEKRFQEEDLIGRVYEYFLQIYAASGTKEDG EFYTPACVVKLIAEMIEPYSGTVYDPCCGSGGMFVQSMKFVDRHNGNRQKISIIGQESQA ETWRLCKMNLAIRGIAHNLGEKNASTFTEDLHKDKKVDFIMANPPFNLKNWRKEDELVGD PRFMKAGFSVMPPVSNANYAWILHMLNKLDVNHGIAGFLLANGALEADGVEYTLRKELIE KDKVEAIIVLPRDMFYTVDLSCTLWIMNMNKKAVVVNGRRLRDRTSEILFMDLRTWNGNS EEIVIDKNKKKKKTVLTDEQISQIKAVYNSWQSDESDEYKDVPEFCKSAKLEGKNGIREN DYSLAPSKYIEFVDHDLGIDYKKEMARIQKEMVEVMRIEKQSQQMLEDAFRGIGYGID >gi|312957022|gb|AENW01000007.1| GENE 56 66613 - 66834 108 73 aa, chain - ## HITS:1 COG:no KEGG:Teth514_1226 NR:ns ## KEGG: Teth514_1226 # Name: not_defined # Def: DNA binding domain-containing protein # Organism: Thermoanaerobacter_X514 # Pathway: not_defined # 1 68 6 73 75 83 61.0 2e-15 MNENNNIEKWVTLKEIQAHLGVGRETILQWIAKRNMPAYKMGRLWKFKISEVDEWVHSGE AADKANSDKNKEA >gi|312957022|gb|AENW01000007.1| GENE 57 67060 - 67545 133 161 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|289640253|ref|ZP_06472470.1| ## NR: gi|289640253|ref|ZP_06472470.1| hypothetical protein EthhaDRAFT_2548 [Ethanoligenens harbinense YUAN-3] # 4 159 47 204 285 112 38.0 1e-23 MKSHRTTQYLENERHYAKDRSVLLIKDKFPDVIDIDNLGAYIEQELTDEKVRDCMSHFAI SVSFPENKSFLARALANQFQMFVDAAEEDIKNEIPNDYVKFVNGRKDSLDVRRSALYTGD DFWVEKQSEHQVSCYKRFMHTWTIHNAGSVYWQGRKLVLKK >gi|312957022|gb|AENW01000007.1| GENE 58 67934 - 68125 104 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401128|ref|ZP_06645272.1| ## NR: gi|293401128|ref|ZP_06645272.1| hypothetical protein HMPREF0863_01412 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 63 1 63 63 69 65.0 7e-11 MTKSEKRMWLTNIENAADAVAAEYSSEVAQSVFQRYDAHGTYDLSSCYYSEVFADLELIA NDN >gi|312957022|gb|AENW01000007.1| GENE 59 68369 - 68887 491 172 aa, chain + ## HITS:1 COG:no KEGG:DET1104 NR:ns ## KEGG: DET1104 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 169 1 167 173 109 39.0 4e-23 MANKENQSKEYRIYIKESKSWVDVNKEFYTNYYRDINAYRKRQQEHGRCVCPASKRYLCD MDCMTCPYAKAGDQLSLDNTVSDGEGNEKSWLDDIPDESAAIAEVLEDAELLNALYAKLN ELDPEGRLICQLIMEGKSERDCGKEMGLSRNTFVYRRDKLLQKLRSDLKDYI >gi|312957022|gb|AENW01000007.1| GENE 60 69031 - 69240 207 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQTFHTRSGTDAEVIATLTAISQVSARMAKNLRLIAAHRQSEEGGTTNVKNERYGYDHR RTEKCCRCY >gi|312957022|gb|AENW01000007.1| GENE 61 69176 - 69496 405 106 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01535 NR:ns ## KEGG: EUBELI_01535 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 106 1 105 109 101 73.0 8e-21 MSKMNDMAMTIEELRNAAAAINDAANWLAHQFSSDAQQQIENIAANTEEKSKPTLTLEEV RAVLADKSRAGHTAEIRELLKKYGASKLSLVDPKHYEALLREAEVL >gi|312957022|gb|AENW01000007.1| GENE 62 69498 - 69836 96 112 aa, chain + ## HITS:1 COG:no KEGG:DET1102 NR:ns ## KEGG: DET1102 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 108 1 108 379 173 74.0 1e-42 MPPKGHALLSASSSDRWLHCPPSARLCETYEDKGSDYAAEGTDAHALCEYKLRKALGMKA TDPTKTLNWYNAEMEDCATGYASFIMELLEEAKQTCSDPVVLIEQRVDSPVG >gi|312957022|gb|AENW01000007.1| GENE 63 70013 - 70636 465 207 aa, chain + ## HITS:1 COG:no KEGG:DET1102 NR:ns ## KEGG: DET1102 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 207 173 379 379 368 87.0 1e-101 MTIYQPRRQNISTYEVSKEDLYQWADEVLKPTADLAFAGDGNFLCGEWCRFCKAKHECRA RAEANLLLAQYDFKLPPLLEDSEIEVILSRVDELVSWAGDIKEYALQQAISGKEWTGWKL VEGRSNRRYTNEDAVSKAVEAAGFDPYEKKLLGITAMQKLLGKSRFEELLAAYIEKPQGK PTLVPESDKRPAMNTAKNDFMEEYDNE >gi|312957022|gb|AENW01000007.1| GENE 64 70629 - 71201 274 190 aa, chain + ## HITS:1 COG:no KEGG:DET1101 NR:ns ## KEGG: DET1101 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 190 1 190 190 320 91.0 1e-86 MSKNVKMTNPMKVITGPNTRWSYANVWEPKSINGGTPKYSVSLIIPKSDTKTVAKIKAAI EAAYREGEAKLKGNGKSVPALSVLKTPLRDGDLERPDDPAYAGSYFVNANATSAPGIVDV DRNPILTRSEVYSGVYGRASISFYAFNSSGNKGIACGLNNLQKIRDGEPLGGKASAESDF ATDDDDDFLD >gi|312957022|gb|AENW01000007.1| GENE 65 71216 - 71389 301 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTEYQNFMLQVCFGCTVGFLIGIWGCNIAFFIKDRKEKRAQKKREAELQKEASKEQE >gi|312957022|gb|AENW01000007.1| GENE 66 71456 - 71641 201 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|163814575|ref|ZP_02205964.1| ## NR: gi|163814575|ref|ZP_02205964.1| hypothetical protein COPEUT_00726 [Coprococcus eutactus ATCC 27759] # 1 61 1 62 62 73 82.0 3e-12 MNEFAEILNQFIANVIAYTFFSAVYGFIIYNVGKIIFYLIRYAVYHIRRDINKYKSNKDK Q >gi|312957022|gb|AENW01000007.1| GENE 67 71696 - 73636 993 646 aa, chain + ## HITS:1 COG:mlr3298_2 KEGG:ns NR:ns ## COG: mlr3298_2 COG0749 # Protein_GI_number: 13472868 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mesorhizobium loti # 179 459 242 493 652 67 26.0 7e-11 MKTLSIDIETYSDEPLQKTGVYRYVESPNFEILLFAYSVDHQPVQVIDLACGEQIPKEIL LALEDEDVIKWAFNAAFERICLSRFLGYPTGEYLDPESWRCSMVWAATMGLPLSLEGVGA VLGLEKQKLTEGKDLIKYFCQPCAPTKTNGQRTRNRPFHAPDKWAMFKKYNIRDVETEMG IQQRLARFPVPAQVWDEYHMDQEINDRGVRLDMELVAAAIEMDTRSRTKLTETMKEITEL ENPNSVQQMKAWLSDNGLETDTLGKKAVAELLKSAPPKLSQVLTLRQQLAKSSVRKYQAM EKTVCADGRARGMFQFYGANRTGRFSGRNIQLQNLPQNHLSDLAEARSLVRSGNFEAVEL LYEDVPDTLSQLIRTAFIPREGTQFLVADFSAIEARIIAWFAGEKWRQDVFAKGGDIYCA SASQMFKVPVEKHGINGHLRQKGKIAELALGYGGSVGALKAMGALDMGLTEDELPPLVDA WRQSNPNIVKFWWNVDHAVMEAVKFKHTTSEYGLTFSCRSGMLFITLPSGRKLAYVKPKI GTNKFGGQCITYEGIGSTKKWERLDSYGPKFVENIVQATARDILCYAMQTLRCCSIVMHI HDEVVIEADPSMSLDAICEQMGRTPPWAKGLLLRADGYATPFYKKD >gi|312957022|gb|AENW01000007.1| GENE 68 73787 - 74206 350 139 aa, chain + ## HITS:1 COG:no KEGG:DET0073 NR:ns ## KEGG: DET0073 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 139 1 139 139 228 76.0 7e-59 MSISKFNSEGYHDPTAYDALSSIENEARALRAFRPIVYICSPFAGDIEKNVAAARAYSRF AVEQGYIPLAPHLLFPQFLDDTDQKERDLGLFFGNAIMSKCSEVWVFGSHISSGMEAEIK RAKWKNYRLRYFTENLEEV >gi|312957022|gb|AENW01000007.1| GENE 69 74210 - 74539 296 109 aa, chain + ## HITS:1 COG:no KEGG:DET1099 NR:ns ## KEGG: DET1099 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 109 1 109 109 148 74.0 5e-35 MYEVKENSRILKDGTEITTYSRDVISCNILEVEAGTTGYCGGDTGHGGRTYFRIQDAACT DMEIHSYTTRCGSNGFEVCLGGDCELETMIRALKFITKVLEDESKEVYD >gi|312957022|gb|AENW01000007.1| GENE 70 74539 - 76812 1316 757 aa, chain + ## HITS:1 COG:lin2587_2 KEGG:ns NR:ns ## COG: lin2587_2 COG3378 # Protein_GI_number: 16801649 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Listeria innocua # 338 720 46 421 456 178 31.0 4e-44 MFTIYSADVTGNPGNCSYPHKHVILDEDSLKAAICHDYVCAEYKNNYRNGDNFIGSDCLP VDCDNDHSENPDDWVTPDDIMQAFPGVSFAIHYSRYNNREKNGKAARPKFHVLFPIEYVS DASLYSDMKKLVNSIFPYFDTQALDAARFFFGTTTADVAIYPGRMNLTEFLDGDLFDEDL PDGQYDGSAIPEGSRNATMSRFAGRVIKKYGDCDKAYQTFIEESTKCTPPLEASELATIW HSAQRFYARLSQQDGYIAPEVYNDPSCYKPGDYSDVGQAEVLAKYFSGELRYSPATHFIR YSDHYWQESEPGAQAVAHELTRRQLKEADNDMLDALDKLKNSGAQSLLDSMSKSKAEQLM NEDQMEAYQEFISAKAYQQFAIKRRDSKNITSTLKESRPMLEISPRDLDADCFALCTPEA TYDLRKGMAGAREHRPEDFITKITSVSPNYKGQQIWLDCLDLIFQSNQELIDYVQMICGL AAIGKVYVEALIIAYGDGRNGKSTFWNAISRVLGLYSGNISADTLTVGCRRNIKPEMAEV KGKRLLIAAEMQEGARLNDSTVKQLCSTDDVFAEKKYKDPFSFKPCHTLVLYTNHLPRVS ASDDGIWRRLIVIPFNAKITGSNDIKNYSEYLYDNAGGSILAWVIEGAKKVIESDYQIPV PECVQNAIDEYRSQNDWFGHFLSDKCEVDQSYKESSSSLYQAYRNYSLDCNEYVRSTADF YFALEKAGFERVTMSRKRYFKGLRLREDTGADEDFMN >gi|312957022|gb|AENW01000007.1| GENE 71 76952 - 77233 196 93 aa, chain + ## HITS:1 COG:no KEGG:DET1097 NR:ns ## KEGG: DET1097 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 3 93 5 95 95 131 74.0 8e-30 MLEKTIEKKLTTAVKKAGGIAPKFVSPSFAGMPDRLILLPDGKFAFAELKAPGESPRPLQ KARHRLLHSLGFRVYVIDSVEQIGGMIDELRTS >gi|312957022|gb|AENW01000007.1| GENE 72 77214 - 78557 770 447 aa, chain + ## HITS:1 COG:XF0680 KEGG:ns NR:ns ## COG: XF0680 COG0553 # Protein_GI_number: 15837282 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Xylella fastidiosa 9a5c # 1 444 1 456 472 305 41.0 1e-82 MNFVPHDYQAYAIDYIETHPIAAVLLDMGLGKTVISLTAIADLLFDSFEAHRILVIAPLR VARDTWPAEIEKWQHLKHLTFAVCVGTPKERKASLMTRADITIINRENLQWLIESSGFPF DYDMVVIDELSSFKNHNSKRFKSLLKVRPSVKRIIGLTGTPSSNGLMDLWAEFRLLDLGK RLGRFITEYRNNYFIPDKRNGQIIYSYKPQPYAEERIYSQISDITISMKSTDHLKMPELI SSEYEVHLSEDEVARYEELKSDLVLELPDGEITAANAASLTGKLSQLANGAIYSDTGEII EFHDRKLDALEDIIESANGKPVLVAYWFKHDLSRIKKRFDVREIKSSKDITDWNAGKIPV AVIHPASAGHGLNLQAGGSTLIWFGLTWSLELYQQTNARLWRQGQTSGTVVIEHIITKGT IDERILKALSKKELTQNALIDAVKANL >gi|312957022|gb|AENW01000007.1| GENE 73 78624 - 79043 385 139 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01548 NR:ns ## KEGG: EUBELI_01548 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 105 1 105 105 194 97.0 1e-48 MNAKEYLLQARYLDERITSKTQQIASLNDLATKCTSTISDMPRNPNHGGSRMEDAILKII DLEDGLKKDIEKLVDLKKEIMGVIHAVPNVEYQMLLEKRYLCFITWEQIAVDLNYSMQHI HRMHSAALKEIVVPQMDES >gi|312957022|gb|AENW01000007.1| GENE 74 79167 - 79526 326 119 aa, chain + ## HITS:1 COG:ECs1595 KEGG:ns NR:ns ## COG: ECs1595 COG1403 # Protein_GI_number: 15830849 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Escherichia coli O157:H7 # 1 105 1 107 146 62 36.0 3e-10 MPRKPKRPCSYPGCPNLTEGRFCPEHEKKEAKRYEKYDRDPATKRRYGRAWKRIRDSYAA AHPLCEMCLENGVYTPTEQIHHVKPLSQGGTHDRENLMALCKSCHAKIHAEHGDRWHNL >gi|312957022|gb|AENW01000007.1| GENE 75 79743 - 80297 480 184 aa, chain + ## HITS:1 COG:no KEGG:BCE_0390 NR:ns ## KEGG: BCE_0390 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 1 183 1 182 183 300 80.0 2e-80 MAKDGTNRGGARIGAGAKKKPLADRIAEGNPGKRELTVIDFTDSTVDLEGQPMPKPSKML SAKQKNGKKLVAAEVYKKTWNWLHERGCAALVSPELLERYAMSVARWIQCEEAITEFGFL AKHPTTGNAIQSPYVAMSQNFMSQTNRLWMEIYQIVKENCATEYNGATPQDDVMERLLLA RKGN >gi|312957022|gb|AENW01000007.1| GENE 76 80451 - 81701 720 416 aa, chain + ## HITS:1 COG:BH3535_2 KEGG:ns NR:ns ## COG: BH3535_2 COG0863 # Protein_GI_number: 15616097 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Bacillus halodurans # 151 389 1 287 292 280 47.0 4e-75 MLIEKKNVAELLPADYNPRKDLKPGDKEYEKLKRSIEQFGYVEPVIWNATTSRVVGGHQR LKVLIDMGITEVECVIVEMDEDKEKALNVALNKISGEWNNDKLALLISDLQGADFDVSLT GFEPEELEDLFREDTKKSVQDDNFDVDAELVKPTFSKTGDLWLLGDHRLVCGDSTKPETY ELLMNRKKANLVVTDPPYNVNYEGSAGKIKNDNMENDAFYQFLLDAYTRMYESMADDASI YVFHADTEGLNFRRAFADAGFYLSGCCIWKKQSLVLGRSPYQWMHEPCLFGWKKSGKHQW YTGRKETTIWEFDKPKKNGDHPTMKPIPLLAYPIMNSSMTNSLVLDPFGGSGSTLIACEQ TGRICYTIELDEKFCDVIVKRYIEQVGSSEKVSIIRDGLTYSYDEIAPEAKDATLL >gi|312957022|gb|AENW01000007.1| GENE 77 81820 - 82506 389 228 aa, chain + ## HITS:1 COG:no KEGG:DET1091 NR:ns ## KEGG: DET1091 # Name: not_defined # Def: virulence-related protein # Organism: D.ethenogenes # Pathway: not_defined # 9 221 11 221 231 201 51.0 2e-50 MKIILNETERKPLAALLGEYTNTKPQYLRAPSYGYQIGDLLLTREGNIEGPDTVSQAEFD ELLAILNASGYCPKKTDFHPAQKSEAEATSTEETGLTITIPLENVNVENLTNLLDAKGFL IKHALHIDDLRFELSEDNISFPWFSELPEPDEVHAYSTLIAALCKMSKNQKRISATEKPV DNERYAFRCFLLRLGFIGDECKTDRKILMRYLPGNSAFKGGEGHAISK >gi|312957022|gb|AENW01000007.1| GENE 78 82490 - 82720 250 76 aa, chain + ## HITS:1 COG:no KEGG:DET1090 NR:ns ## KEGG: DET1090 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 72 1 72 74 100 63.0 2e-20 MQFPSKEQVARQRCLYPAGTRVELVQMDDAQAPPVGTRGTVIGVDDTGSIMVDWDNGSGL NVIYGVDRCRKIPTND >gi|312957022|gb|AENW01000007.1| GENE 79 82845 - 83213 242 122 aa, chain + ## HITS:1 COG:no KEGG:Amet_4035 NR:ns ## KEGG: Amet_4035 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 1 115 1 114 118 118 57.0 6e-26 MKEIKTFEAAIKQNAKSLEELGINATLFLAYRTSRENENELIDFNEVIWDYDIEDISKTF RANNITEFTISSTFSSLIETLAAFEKQGISMAGLTTVKARYTDWETGEHALIPAIKMTVK EA >gi|312957022|gb|AENW01000007.1| GENE 80 83217 - 83459 313 80 aa, chain + ## HITS:1 COG:no KEGG:Amet_4034 NR:ns ## KEGG: Amet_4034 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 1 80 1 74 74 62 45.0 4e-09 MWKEGTIGIPKKEGRYKSVKYWVKYFEEPSEDYGINGGKISKLSLKMDSEWIANYDRGWD IKPTCEEANIALSILLNELN >gi|312957022|gb|AENW01000007.1| GENE 81 83568 - 85169 1124 533 aa, chain + ## HITS:1 COG:ECs1598 KEGG:ns NR:ns ## COG: ECs1598 COG4626 # Protein_GI_number: 15830852 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 # 18 510 39 525 553 274 32.0 3e-73 MRKLENYTPTRFMAADSTYNKQMADYAVNFIECLCHTKGTWSGKPFELIDWQEQIIRDIF GTLKPNGYRQFNTAYVEIPKKMGKSELAATVALLLTCGDGEERAEVYGCAADRQQATIVF DVAADMVRMCPALNRRVKILASQKRIVYQPTNSFYQVLSAEAYSKHGFNIHGVVFDELHT QPNRKLFDVMTKGSGDARMQPLYFLITTAGTDTNSICYETHQKAKDILEGRKIDPTFYPV IYGADETDDWTDPEVWKKANPSLGITVGIDKVEAACESAKQNPGEENAFRQLRLNQWVKQ AVRWMPMEKWDACSFKVDEESLEGRVCYGGLDLSSTTDITAFVLVFPPLDEDDKFCILPY FWIPEDTLDLRVRRDHVPYDVWERQGFLETTEGNVVHYGYIEKFIERLGERFNIREIAFD RWGAVQMVQNLEGMGFTVVPFGQGFKDMSPPTKELMKLTLEQKLAHGGHPVLRWMMDNIY IRTDPAGNIKADKEKSTEKIDGAVATIMGLDRAIRCGNNTGASVYDERRILFI >gi|312957022|gb|AENW01000007.1| GENE 82 85210 - 85539 251 109 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0746 NR:ns ## KEGG: HMPREF0424_0746 # Name: not_defined # Def: toxin-antitoxin system, toxin component, RelE family # Organism: G.vaginalis # Pathway: not_defined # 1 108 1 108 110 116 51.0 2e-25 MTDSYKVGYSVDALEDLREIYSYIANELLVPETASAQLGRIRKEVRSLDFMPARYALVDW EPWHSMKMHQLPVDNFIVYYLVDDEKRAVTVARIFYGGRDIEGIINSNK >gi|312957022|gb|AENW01000007.1| GENE 83 85536 - 85841 361 101 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0747 NR:ns ## KEGG: HMPREF0424_0747 # Name: not_defined # Def: putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein # Organism: G.vaginalis # Pathway: not_defined # 1 101 1 104 104 142 73.0 3e-33 MANTSAVYARIDTNLKDNAESILSQLGISPSSAIQMLYSQIVLKKGMPFELKLPSSKPLA VGAMTREQLDAELQKGVDSIKAGKVYSADEVDAALAKEFGI >gi|312957022|gb|AENW01000007.1| GENE 84 85974 - 86201 62 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDRFFFATRVRVFIDMNRKPSDGLRKNPDASIDCSHLHGASFIDGFAGVTSTKEKAIGT AIGAVSGLVPGVKQS >gi|312957022|gb|AENW01000007.1| GENE 85 86271 - 87332 402 353 aa, chain + ## HITS:1 COG:RSc1682 KEGG:ns NR:ns ## COG: RSc1682 COG4695 # Protein_GI_number: 17546401 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Ralstonia solanacearum # 3 301 106 398 407 190 35.0 3e-48 MTHLLLYGNAYAQIIRNGKGEVIALYPLMANRMSVDRDDKGLLYYQYQMQDSDAPTMKNG TVILKSSDVLHIPGLGFDGLVGYSPIAMAKNAIGLAIATEEYGAKFFANGATPGGILEYP GTVKNPEAVRESWTKGFSGNNSHKVAVLEEGMKYTPISISPNEAQFLETRKFQIDEIARI FRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLEPWIVRWEQSINRALLSESEKAAYFVKFN VDGLLRGDYQSRMNGYATARQNGWMSANDIRELENLDLIPPELGGDLYLINGNMTKLEDA GIFVAATAAGKEDENNEEILEVEESDGNQSGDAGTDTGEDTVSKRHHRRGKLV >gi|312957022|gb|AENW01000007.1| GENE 86 87217 - 87960 610 247 aa, chain + ## HITS:1 COG:L34899 KEGG:ns NR:ns ## COG: L34899 COG0740 # Protein_GI_number: 15673378 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Lactococcus lactis # 37 227 22 212 235 122 41.0 7e-28 MKKFWKWKNQTVTNQETQEQTLERTLFLNGTIAEESWFDDDITPKLFRDELFAGNGDITI WINSPGGDCVAAAQIYNMMMEYPGNVTVKIDGIAASAASVIAMAGTKVLVSPVSMLMIHN PMTAAMGDTSEMQKAIAMLAEVKESIINAYEIKTGMSRAKLSHLMDAETWMDAHTAIDMG FADGILAKPAETPVENNATGPMLFSRAAVTNSLMDKLAAKCRIKKPETPERSVDSLMERL DLIKQYI >gi|312957022|gb|AENW01000007.1| GENE 87 87976 - 89160 915 394 aa, chain + ## HITS:1 COG:ECs1590 KEGG:ns NR:ns ## COG: ECs1590 COG4653 # Protein_GI_number: 15830844 # Func_class: R General function prediction only # Function: Predicted phage phi-C31 gp36 major capsid-like protein # Organism: Escherichia coli O157:H7 # 3 388 4 380 385 124 26.0 2e-28 MTILELHEKRNTAWNAAKAFLDSHRTEKGTLTAEDDATYSRMEQEIADLGKEIARLERQE ALEAELNKPVNKPLTSKPGNSATDKPVKTGRASDEYKNGMLQALRTNFRQVSNILQEGVD ADGGYLVPEEYDSRLIDVLTEENIMRSLGHTITTSGEHKINIAATKPAAAWIEEGSALQF SDATFSQILLDAHKLHVAIKVTEELLYDNAFGLENYIIDQFGKALANAEEDAFLNGDGSG KPTGLFATAGGGTVTGTLSAAIKSDDMLDLVYALKRPYRKNASFIMNDKTLAQLRKLKDN NGAYIWQPSYQSGEPDKVLGYAVHTSAYAPENAIAFGDYSYYNIGDRGTRSFKQLTELFA GNGMIGYVAKERVDGKLILPEAVQILKLSGSSKG >gi|312957022|gb|AENW01000007.1| GENE 88 89226 - 89498 207 90 aa, chain + ## HITS:1 COG:no KEGG:DET1084 NR:ns ## KEGG: DET1084 # Name: not_defined # Def: DNA packaging protein, putative # Organism: D.ethenogenes # Pathway: not_defined # 1 90 1 95 95 93 60.0 2e-18 MIVTLEEMKQYLRVDFDDDDFLIETLITSATRLCMDITRQNEDVFEESENAKPAVYYAVA YLYEHREEADHHALTLTLRSLLFGSRKEAF >gi|312957022|gb|AENW01000007.1| GENE 89 89498 - 89830 177 110 aa, chain + ## HITS:1 COG:no KEGG:DET1083 NR:ns ## KEGG: DET1083 # Name: not_defined # Def: head-tail adaptor, putative # Organism: D.ethenogenes # Pathway: not_defined # 6 106 1 100 105 88 43.0 6e-17 MNIELLNVRIYIQKNEVISDAIGNRKNAWKDYYTCYATVSAEAGKESTDAGLVVDDSKID FTIRYCKRAAALTSTGYRVQFESELYDILAVDHMNFKRKCIKLSCQKVRR >gi|312957022|gb|AENW01000007.1| GENE 90 89832 - 90215 313 127 aa, chain + ## HITS:1 COG:no KEGG:DET1082 NR:ns ## KEGG: DET1082 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 1 127 1 127 127 126 58.0 2e-28 MAQKVKIDGLAEAVMKELTEYADLATVDMKAAVKKAGNTVKKQIQSTAPKDTGAYSKSWS VKNTKETSKSLEVTVYSRNRYQLAHLLEFGHAKRGGGRVAGRSHIAPAEEAGIKELESEI ERCLKNG >gi|312957022|gb|AENW01000007.1| GENE 91 90208 - 90525 274 105 aa, chain + ## HITS:1 COG:no KEGG:DET1081 NR:ns ## KEGG: DET1081 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 2 103 4 105 108 117 54.0 2e-25 MDRLLQILSEMAIPFAYDHFAEGESPNPPFICYLLPGSDNFSADGRVYYKINEVRIELYC DSKDPALEATLEAVLDEHGIFYNKTEVWIKSENLYEVLYTFEMEV >gi|312957022|gb|AENW01000007.1| GENE 92 90531 - 91103 511 190 aa, chain + ## HITS:1 COG:no KEGG:DET1080 NR:ns ## KEGG: DET1080 # Name: not_defined # Def: phi13 family major tail protein # Organism: D.ethenogenes # Pathway: not_defined # 3 188 6 195 202 197 54.0 1e-49 MGNKVKYNLKNVHAAKLTRGEDGSFTYAKPKAIPGAVSISLDAEGDSSPFYADGIVYFRS TANNGYSGDLEIALIPEWFRTEILKEELDKNGVLIENATITELEKFALLFEFDGDVRSIR HVLYNCTSSRPSIESETKEDTIEPGKEKLTLTADPREDGLVKSRTGDATDAEIYKNWYQQ VYVPVPKTEG >gi|312957022|gb|AENW01000007.1| GENE 93 91118 - 91492 386 124 aa, chain + ## HITS:1 COG:no KEGG:DET1079 NR:ns ## KEGG: DET1079 # Name: not_defined # Def: hypothetical protein # Organism: D.ethenogenes # Pathway: not_defined # 4 124 5 125 125 130 48.0 2e-29 MLEKTITIGDKQVKFRSSATIPRLYRAKFKRDIFKDLSRLESSYKGNSDDGSSFEIEDLE IFENVAYIMAYHADHSIPATIEEWLDEFEMFSIYEVLPEILELWGMNLQTEIEAKKNFIA VAGK >gi|312957022|gb|AENW01000007.1| GENE 94 91669 - 94821 1494 1050 aa, chain + ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 4 625 36 658 696 202 27.0 2e-51 MANRIKGITVEIGGDTTGLDKALKSVNTSIRSTQSALKDVNRLLKLDPSNTELLSQKQRL LKDAIAATKEKLDSLKVAQEQAKQQLENGELGQDKYDALQREIVETEEELRRLQQEAATT NTALSKIDVAGQKMEAVGNSIAGAGKKMMGVTTVIGGVGVAAVKTAADFDSAMSQVAAVS GATGKDFDALRNKAREMGAKTKFSATEAAEAMNYMAMAGWKTEDMLDGIEGVMNLAAASG EDLATTSDIVTDALTAFGLSAKDSGHFADILAAASSNANTNVSMMGETFKYCAPIAGALG FSAEDTAEAIGLMANAGIKSSQAGTALRTIMNNLAGDVKISGKAIGDVTIATTNADGSMR DLSDILADCRSAFGNLTESEKAQAAESLVGKNAMSGFLALMNAGQGDIDKLSSAIDNCDG SAEKMAMTMQDNLAGQLTILKSQLQELAISFGDILMPAIRSIVSKLQGFVDKLNGMDEGT KRTIVTIALLVASIGPLLVIIGTAISKIGVAMQGFVKLANGISKLKIAIQGGTGVLGKLG SALGGISAPVLAVVAVIAVLVAAFVHLWKTNEGFRDAIIGTWNRIKDTISGFCQGIVDRL NALGFQFTDIVDVLKTVWDGFCQVLAPIFEGVFNNIANILSTVTGVITGILDVFIGIFTG NWSQAWNGVTEIFSSIWNGISSFFTNILNVIKGAADVVLGWFGTSWNEVWTNIKTFFEGI WNGIATFFTTIWETLKNVVTVGIMAIGSILSAAFDIITLPFRFIWENCKEIIISVWDAIK SKVTTVIHAVASVISTVMNTIKTVFSTVWNAIKTVVTTVVNAIKSVVTTVFNAIKSTATT VWNAIKTAVTTPVNAIKSSVTTVFNSVKSTVSSIFNGIKSTATSVWNGIKSAITTPIEAA KNKVKSVVDAIKGFFSGMKISLPHIKLPHFKVTGKLSIAPPSVPHLSIDWYKEGGIMTRP TIFGMNGSSLMAGGEDGAEAILPLAGFYKQLEAMISSHLNTSAMEKYLAIIADNSSKGIY LEDGTLVGHLLPAIDGELGKAQKLQRRLSL >gi|312957022|gb|AENW01000007.1| GENE 95 94818 - 95468 116 216 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255284305|ref|ZP_05348860.1| ## NR: gi|255284305|ref|ZP_05348860.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] # 1 216 1 216 216 302 66.0 7e-81 MTPDIKLNGTSVASMGWLRETISFPVPQSQSNTIVVPGRNSPIRYTEALGRVSYQPRSFS LTFSMLGPRKKYDQMVAEMANHYAGQLIKVSTSEEPELYAIGTLEISSEYDPLSGKGQLV ISCEDADSYRYHNDETIINLTGSGTLIIENDFMPVVPVITTSTETALSWTIGSDSFRKSL SAGTWTLPEFELQAGINTVAIQGTGTTAFRFREGRL >gi|312957022|gb|AENW01000007.1| GENE 96 95465 - 97186 875 573 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_1301 NR:ns ## KEGG: EUBREC_1301 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 393 2 388 680 155 29.0 4e-36 MSIFRIFVDGQLFYHPQLSKLAITEAKMTEDAENIDSLTLSAPFNHPYLDSIRPMASTIV CKKGDATVFEGRALNDGSDFYNTHTWTCESALAYLKDSQQPPFSYKGTLKGLLEYFLSVH NKAVEEKKRFKLGNITVTDNNDYISYSNSEYSCTLDAIKSKLINTHGGYLMVRYTESEKI LDYLAEFNTRSVQSVEYGKNLTDVKITRDHTERITALIPLGAKKKTTDEEGNEVESDERV DITSVNDGLNYIYDDAAVKKIGWIWATEVWDDVTLPGNLLRKAKARLAELIAGITSMELT IVDESDTGADIGSIHARQFVNCLSPPHGIDGRYVCMSKTVDYLNPSGNTITIGASGIKLT GISAKQNANITELTDDLIGKTAEIQSAIAKADAAEATAKDAKEATDAVIDDITALQESVR ECYSEISKTSEEINLTVREEYISRSEMATIQQDFQSTITQNSSEIRMDFSAVTDELKDNI ATNQELLEEYIRFKGALIELGKVGNAFTAELSNNELAFKENGQKIAYISNNSLVITNAEI RNKLSLGNETRGWFDFIPRNNGNLSIKWRGPAS >gi|312957022|gb|AENW01000007.1| GENE 97 97201 - 99096 899 631 aa, chain + ## HITS:1 COG:no KEGG:MGAS10270_Spy0841 NR:ns ## KEGG: MGAS10270_Spy0841 # Name: not_defined # Def: phage structural protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 75 631 72 620 620 216 37.0 2e-54 MASSGSITTGTKEGRSVTLSWTLSSQDIANNTSTIAWTLKGSGSGSGWVMSGGFKAVING TTVYSTSTDNRIQLYNGTIVASGSLKISHNADGTKSFKLSCEAGVYSYAVNVSASGTHTL NTIPRASSVSAAPVNMGSATTISISRASSSFTHTLTYSFGSATGTITTKTTSTSVSWTPA LALANQIPSTTSGTCTITCDTYNGSTKIGTKTCTLTLTVPASVKPTISSLTASRVDGNVP STWGIYVQSKSKATLTINGAAGSYGSTIKSYSISGGGYSGTSSTLTTGFLNSSGTITFTA TVTDSRGRTSAAATVSITVIAYSVPFFSSYSSQRCNSGGTISDDGTYIKATISYSFASCS SKNTVTRSTYYRVAGTSTWTNTSASFNSGTAFTFGSGKISTETSYEVKYELTDAFTTISI TDIVSTASVVMDFKSGGKGVAVGKVSETDNCFEVSEKWDVKVYGKLLSEYVKQAIGAIYP VGSIYMSVKNTNPSTYFGGTWIAWGTGRVPVGVNANDSNFATVEKTGGAFTVTLTTAQIP SHTHAKGTLATASAGGHTHDLKNQKTSWGTSGGNRVLIDATSGYSAVSNKTTTSAGSHSH TISGSTAASGSGSAHNNLQPYITCYMWKRTA >gi|312957022|gb|AENW01000007.1| GENE 98 99167 - 99580 380 137 aa, chain + ## HITS:1 COG:lin0175 KEGG:ns NR:ns ## COG: lin0175 COG4824 # Protein_GI_number: 16799252 # Func_class: R General function prediction only # Function: Phage-related holin (Lysis protein) # Organism: Listeria innocua # 14 136 11 132 140 91 41.0 3e-19 MKEFWNTIQLIFAGIGGWLGYFLGGCDGLLYALIAFVVIDYITGVMCAIANHTLSSEVGF KGICRKVLIFLLVGIANILDIHVIGSGSVLRTAVIFFYISNEGVSLLENAAHLGLPVPEK IKTVLEQLHDRSTKEEN >gi|312957022|gb|AENW01000007.1| GENE 99 99582 - 100535 404 317 aa, chain + ## HITS:1 COG:no KEGG:Amet_2548 NR:ns ## KEGG: Amet_2548 # Name: not_defined # Def: sporulation domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 4 217 2 194 322 133 38.0 9e-30 MAYTNSKLISYTKLSPNHSGQRTHSIDRITPHCVVGQLSAESICGCFTSPSRQASCNYGI GKDGRISLCVEEKNRSWCSSSNANDQRAVTIECASDMSEPYAMNSAVYNSLIKLCVDICR RNGKKKLLWLADKNKTLKYTPKSNEMVLTVHRWFANKSCPGNWLYSRLGDLAAKVTSELS KTTSGSGTASTSQMYRVRKTWSDSKSQLGAYKLLANAKKKADENTGYKVFDASGNIIYPT AAKPAQTPAADTSYKVQIDIANLNIRKGPGTNYGKTGQFTGKGIFTIVQEAKGEGATLWG KLKSGAGWISLDFAKNL >gi|312957022|gb|AENW01000007.1| GENE 100 100686 - 100883 141 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401168|ref|ZP_06645312.1| ## NR: gi|293401168|ref|ZP_06645312.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 7 64 54 111 112 68 58.0 1e-10 MPGSTSPKPIQQSDIEQDYDFLQAQRVSEKMLSLGLISLSEFNKLTEINRKTFSPFWVEI MPKIP >gi|312957022|gb|AENW01000007.1| GENE 101 100938 - 102503 658 521 aa, chain + ## HITS:1 COG:SA0057 KEGG:ns NR:ns ## COG: SA0057 COG1961 # Protein_GI_number: 15925764 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Staphylococcus aureus N315 # 21 408 8 379 542 113 27.0 1e-24 MKKVTKIDGVQKNTAINSKLRVAAYCRVSTGSDAQLESLEAQKSHYEQYINSREDWQFAG LYFDEGITGTKAEKRPELLRLITDCEARRIDFVITKSISRFSRNTTDCLALVRKLQSLEI PIYFEKENINTGSMESELFLAILSSMAEGESASISESAKWSVKRRFQNGTYKLGYTPYGY DWDGKNMIINPDQAAIVKRIFADILSGKSTNAIADELNEEKVPSKKNINWTSSTIRGILA NEKYTGDVIFQKTYTDENFNRHTNYGEVDQYMAPDHHEAIISHSDFDAANALVNQRAAEK GIEKGSDKYQQRYAFSGKIICGECGDTFKRRIHSCTTYKYVAWACNTHLKNKKACHMKYI RDDEIKAAFITMLNKLIYGYRLILTPYLKVLENSSGDEAIQRIQHLEQLIAQNSEQREAL TKLMAQGYIDQILYNQETNALLLQAETYRSDIEAITIGMTGDAAKVTETNLLLHFVSHTD MLTTYSEELFENYADHIEVINRNAIRFVIKCGLTFTERIGD >gi|312957022|gb|AENW01000007.1| GENE 102 102504 - 102920 186 138 aa, chain + ## HITS:1 COG:no KEGG:DET1068 NR:ns ## KEGG: DET1068 # Name: not_defined # Def: phage integrase family site specific recombinase # Organism: D.ethenogenes # Pathway: not_defined # 1 137 1 137 138 146 54.0 3e-34 MGHTPFGYKIENGIAVIDQPAADKLKQLYKNYLSGMSLTKAASAAGIKTYHGTAKRLMET AHYLGDSFYPAIIDKDTYQKAQEERKRRATALGRNNKQTQMRKIQIPTRFHMGEITAIYD NPVKQAEYLYGLIESESK >gi|312957022|gb|AENW01000007.1| GENE 103 102920 - 103957 430 345 aa, chain + ## HITS:1 COG:SA0057 KEGG:ns NR:ns ## COG: SA0057 COG1961 # Protein_GI_number: 15925764 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Staphylococcus aureus N315 # 28 338 8 306 542 121 32.0 2e-27 MGNIMLIPARRQVGSNARKQEEEKPKLRVAAYCRVSTDSDEQATSYEAQVEHYTEYIQKN PDWEFAGIYADDGISGTNTKKREEFNRMIDDCKAGSIDMIITKSISRFARNTLDCLKYIR QLKDMNIPVLFEKESINTMDAKGEVLITIMASLAQQESQSLSQNVKMGLQYRYQQGKVQI NHNRFLGYTKDADGNLVIDPEQAETVKRIYREYLEGLSMDKIADGLERDGILTGTGGKKW YTSTINKILRNEKYIGDALLQKTYTTDFLNKTRVKNNGLVPQYYVEGDHEAIIPKDIYLQ VQEELVRRRTVKTSANGKKRNYSCNHCFSQIVICGECGEMFRRLH >gi|312957022|gb|AENW01000007.1| GENE 104 104087 - 104326 59 79 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01551 NR:ns ## KEGG: EUBELI_01551 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 73 1 73 133 104 97.0 1e-21 MLGDKSNYQAQLQLNIAAVIRASQATTIDSIDEKLMALQQELIQKANSKEDYDEIADEIF RLRELRQKTTVDTPQEMNR >gi|312957022|gb|AENW01000007.1| GENE 105 104539 - 105900 272 453 aa, chain - ## HITS:1 COG:no KEGG:KPN_01440 NR:ns ## KEGG: KPN_01440 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 78 414 83 426 461 176 31.0 2e-42 MSEFKYTETEQQFNYVLNHQSKELSSIKSPDMATAEACISESEALLKELGISIENLPKVV NPTPKRVMVVPSWEELCNKAEQEVGSTTDLESLFTDEELRMNQDALRSLNADYNNIYKLD KIDITICAAAGILGAVVDILLIGIPQKTPEGLKGGPLSNYVRDWFNQRFPEEEMEKLANS KVSKVSFDAQDNRHTTEYVTGLSAYYHRLLSLGHDPILGLIFGVYDILNGKMTTIDKTGK IVSQVMENYADRKESDVFSAIAKQIIHFKSDITTSMGLPAPLMGLFNLLQFGSIGEEEQM IAEIVQGMYYEGYDFIHFCSMSIPTMIIEVIIRLGYGIKRIKEGNTIKDSIPFSLNREKH PKLSTMLFIGHFAATAVNAGKVYFTQNPMAINYPQWIAFAKYSYKQLKWVLLEKPELRDA YVRGIIAEELNEVYAEIDNTFEKISEKYIVVFN >gi|312957022|gb|AENW01000007.1| GENE 106 105897 - 106448 358 183 aa, chain - ## HITS:1 COG:no KEGG:KPN_01441 NR:ns ## KEGG: KPN_01441 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 44 125 33 113 165 72 60.0 8e-12 MGEYVKKKKDMVFQSVESLQQVVNVVNEAAAAVNDKSRTIRESAIPEVLAGALGAGIGGV GSFVALYGLGSVVGLSAAGITSGLAAAGSIVGGGMVAGVFVLAAPVAALAAGGVGLASHL KNKQLRQEKERLYKEALKKHEAIIQALKSESDADKERLDYLQSLNILLTQAIKDLKKDLG KAA >gi|312957022|gb|AENW01000007.1| GENE 107 106474 - 107301 275 275 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|210612226|ref|ZP_03289195.1| ## NR: gi|210612226|ref|ZP_03289195.1| hypothetical protein CLONEX_01395 [Clostridium nexile DSM 1787] # 3 271 21 285 302 150 34.0 6e-35 MEFDLRTCDAAYYFVLDFMGMTPDEYITEKIINCENDFETFWNRNIERIKSVDISRLRLM AFHVVGSLDECREIKENGLMNLQMVLSEETTLKRLLEKAGVKFDILIKLVSCNGKSYDID YEKYKGQHFLIGIDEKLDRVSHRIYYDFCVNGFMANDNVFNYGTNIHERPEFLMTLGELF PQAEKVESFWRTKAKSYRIDFYATVDQVHRFNFELDEYRDPPYEDWFELDDDMKLKKWML SHAIDRAHDALGMTILYVKDDVIIPANQIIDISEL >gi|312957022|gb|AENW01000007.1| GENE 108 107580 - 108914 1280 444 aa, chain - ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 1 443 8 458 458 452 48.0 1e-127 MKRNDQVYGVCSGYTHDGHGVVKIDGFPLFVKGMLEGEAGELVVTMAKKKFGYGRLMKRS KTSSQRVAPPCPIAKQCGGCQLQHMSYAEQLRFKKQKVQDVMQRIAHLDIEVWDVLGMQD CYTNYRNKGQIPVGVEKGKTVTGFYRINSNAIIDTDTCLIQSERINAVLQEMRKLFEKYQ NAKLFRHLLIKHAFSSDEVMVVWIVRSFQIPHGKEMVQELTAALPFVKSVILNLNVRDDN VILGDKEQLLFGERAITDSIHDLKFSISSKSFYQVNPRQTEILYGKALEFAKLTGKETVL DLYCGVGTISMFLAQRAKHVTGIEIVPQAIRDARKNAALNGIANIEFVCSDAADYAKKLC EQGAHPDVIVVDPPRKGCDAQTIDSMVMMQPKRIVYVSCDPGTLARDLKLLEEKGYRTEI VQPLDMFPFTHHVETVCLLSRKDK >gi|312957022|gb|AENW01000007.1| GENE 109 108951 - 109547 685 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914431|ref|ZP_02076646.1| ## NR: gi|160914431|ref|ZP_02076646.1| hypothetical protein EUBDOL_00435 [Eubacterium dolichum DSM 3991] # 5 193 9 205 213 208 59.0 1e-52 MSKKKKKTKAGGGKSKILYWIAGIVILIPVLLLGWIYLSAKESSGSPTVGSRFDNSLNPA ITEEQMDKVKSAMKLDGVESVEVNLISATLRINIDTKDDASSAKVKSIMNEAYDKVNDIL PIKKYFTNNDSDKMYDLEVHVYNFIPDDKHSADDQIYKIKTKTAAAKKPNVSTPSSPKNK SVAEKLLKQQEEAAKKNK >gi|312957022|gb|AENW01000007.1| GENE 110 109813 - 111237 1942 474 aa, chain - ## HITS:1 COG:BH0667 KEGG:ns NR:ns ## COG: BH0667 COG0064 # Protein_GI_number: 15613230 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Bacillus halodurans # 1 474 1 476 476 485 52.0 1e-137 MKYETVIGIEIHCELKTKTKMFSGAPTSFGEVANTCVNEVDLGHPGTLPCVNKDAVRLAI LAATALKCEIDPLVKFDRKNYYYSDLPKGFQITQQFHPIGSNGVITIKTDDGEKDIRINR IHMEEDTAKQFHSDAGTLVDYNRAGTPLVEIVSEPDIRNGAEAAAYVEKLRSMLYYLGVS DVKMEEGSMRCDVNVSIRPQGSEALGTKTEVKNLNSISNVQKAIDAEVARQRELLENGEE VVQATRRYDETQKTTILMRKKEGNVDYKFFPEPNIPPIRLDAAWIKDIQDNMEELPDERK ARYMHDYALKEYDADVLVANRELSNFFDEVCQYTKNYKKAANWVIVEVTAALNKANIKLV DNPCNPKHLADMVNMVDAGEISGKQAKIVFEDIMQGKDPKKVVEEKGMKQMSDSSELLAM VSAVLDNNPQSIEDFKNGKDRAVGFLVGQVMKASKGQANPAMTNKLIQEELKKR >gi|312957022|gb|AENW01000007.1| GENE 111 111234 - 112655 1832 473 aa, chain - ## HITS:1 COG:MA4523 KEGG:ns NR:ns ## COG: MA4523 COG0154 # Protein_GI_number: 20093308 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Methanosarcina acetivorans str.C2A # 4 462 16 465 476 313 36.0 4e-85 MDFERARKQDVEGRVYEALEKAKEAQARLNAAVTFVDPKEQLKELEAIGADAAMYGMPVV LKDNVNTKGIRTTASSRILDNYIPVYNAHIVDKLQAAGAVVIAKASMDELGMGGTNRNAY TGPVNNAWDESRISGGSSGGSAALVAAGVVPFAIGTDTGDSVRKPAAYQGIIGMKPTYGR ISRYGIIPYASSLDHVGYFTTSVQDTAVALEVLAGRDDRDMTSSNRAVEAYAANLNHDLR GKRIAVLDNVQEAVADPAIRENFDTLMKKLEARGATVTHVRMDDKLMKALMPTYYIIANA EATANHSNLDGIRFGMREAGENVEDVMINTRTKGFCSYVRKRFVIGSYSLFVENQDKIFR KAQKVRRLIVEELNRVLANSDVVIASAAGTIAPLAEESKDSHLGADNNVAENHMVLGNFS GYPSMTMPTGFAEGMPIGINMTAKAFDEQTLFNIGLAIEEETGLKGNDVEVDA >gi|312957022|gb|AENW01000007.1| GENE 112 112657 - 112950 478 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401239|ref|ZP_06645383.1| ## NR: gi|293401239|ref|ZP_06645383.1| glutamyl-tRNA(Gln) amidotransferase, C subunit [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 97 1 97 97 122 79.0 6e-27 MEEFSAEYFKKLAHDIMFDLNDEEVSELQEEFKVLLQQIELLDGIDTEGVEEMIYPFEAE TTFLREDSVDNVISQEAALLNVKSAKAGHVHVPKVVK >gi|312957022|gb|AENW01000007.1| GENE 113 113133 - 114257 1536 374 aa, chain - ## HITS:1 COG:BH0650 KEGG:ns NR:ns ## COG: BH0650 COG4851 # Protein_GI_number: 15613213 # Func_class: R General function prediction only # Function: Protein involved in sex pheromone biosynthesis # Organism: Bacillus halodurans # 69 350 81 369 392 120 29.0 3e-27 MNRKPRAVPILLLCSCMLVLGGCNKEDKNKADNDKSSEETKAINEGEYSALLPFSVSDAG QKHAQMQTNLSDTLTIGTGLMELSKEYFSSKTYAFRGGKYLDYNTLDASADNSGLLGRTS KKNANGLNPAVGDVFPTDDGDKKITANDVLLLDIFEYDWYQNKELKGLSLALVFNDKIGT EPKEATIDSDKMKLYGEECARKLVNYLRKAKPEIGNNTPIYVALYNTSSDDATLPGTYFE EAYFESKTNAEFKAINEKWALFPTSTATKLDGTNATYFDRYKASFQDFLGQDIDMIGKGH FMDNELTDLRINVKLHAKSADEVIAAVQLLDERLSIFSSNNFKITVVVKADDVDVATITR NKGTSSTVAQTLLY >gi|312957022|gb|AENW01000007.1| GENE 114 114241 - 116238 2569 665 aa, chain - ## HITS:1 COG:BH0649 KEGG:ns NR:ns ## COG: BH0649 COG0272 # Protein_GI_number: 15613212 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Bacillus halodurans # 2 659 6 668 669 665 52.0 0 MSQQRILELRSILDRLAYEYYVLDQPSKSDQEYDRYYQELVALEDEFPQYRDPNSITQRV GGVVLDAFTKVEHKRTMLSLGNAFNLEDLHAFDERVREVVPNARYVVELKIDGLAMSLIY RDGRFVQALTRGDGVVGEDVTHNVKTIPSIPMHIPLQGEVEVRGEVYMPNASFQMLNEER EKNGEELFANPRNAAAGSIRQLDSSVAAKRKLDAFWYYFVNAQEYDIHSHEEALQKMSEM HLRVNPLRKVCERIDEVWQFIEEITEQRNDLPYAIDGMVIKVDDLDAQNRLGSTVKVPRW AIAYKFPAEEVITKLLDIVVTVGRTGRITPNAVLEPVRVAGTTVSAAQLHNEDMIKEKDI RIHDDVVVRKAGDIIPEVVRPLLERRNDTQAVYHFPTHCPICGSELVRFPEEAAHYCINQ DCPARVVESMIHFASRDAMDIDTLGDKKVEFFHKQGFLNTIEDIYCLKEHRQELIDLEGF KEKSVDKLLDAIEDSKQNPLEDLIYGLGIRQVGKKAAKVLAKHFLSMDALMAANEEELVA IKDIGQITAESITAFFHEPKNMELIAHLKGYGLRMDTEAEQIQESSFSGKTIVLTGTLTQ MTRNDAKALLESLGANVSGSVSKKTDLVIYGEAAGSKLTKANSLGVMTMDEDTFMKEVNG NEQET >gi|312957022|gb|AENW01000007.1| GENE 115 116249 - 118540 2678 763 aa, chain - ## HITS:1 COG:SPy1267 KEGG:ns NR:ns ## COG: SPy1267 COG0210 # Protein_GI_number: 15675225 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 3 763 4 772 772 475 37.0 1e-133 MSFLDQLNEHQLEAVQCVDHHLRIIAGAGSGKTRVVTTRIAYLINDCGVYPNKVLAITFT NKAAREMKERVENLLGDVAKAVTISTIHSFCVRLLREDILELGYPRNFTILDADDQKSIL RDAYKQMHIDVKSYSYNSVLSYISNNKTNFIDAATAKAGAGKWAGEQIKADVYEFYEKRL KEMYALDFDDLLIFAHRILKSKEEVRAKWQRRFTYLHVDEFQDVDNLQYAIIKLLVKEGS YLCVVGDPDQTIYTWRGAQVDIIMNFERDFPDSHTVVLNENYRSTQQILNGANALIKNNR NRIDKDLFTRVESEDKIIHFSAMDDANEPVWVASKIMTLHHDHVDYRDIAILYRSNFLSR GLEKVLLDFHIPYRIYGGVRFYDRAEIKDALSYLRLLAPFDEQDPKALYKNLAVKRVINS PKRGIGAKTLETIELQANHDETNMYDVLCEYEIGKGKARANIQAFVAMIEECRMLVDTIS IDQLLEKVLEDSGYLDMLREDKEIERLENIKELIGDISDYVEAHPEGTLNEYLQEISLYS DKEEQENGDFVQLMTIHAAKGLEFDNVFVYSLCEGIFPNERSVGEGGQPALEEERRLAYV AFTRAKKQLFLSDSYGYSYVLDKIKTTSRFIKELPEDCIEDVGAKPRNTFSSDVDTFSGS DFLSMHSSDMVQHRPQESSGYARQAERKLSDVRIADSFDGAPIINEDRKPKKKGKIRKGD LVHHESFGDGVVIKLEEQLATIAFEQKFGIRKIKIDHPALSKK >gi|312957022|gb|AENW01000007.1| GENE 116 118732 - 120315 2178 527 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 76 445 76 436 481 137 26.0 6e-32 MAKQKPKRYYTRTIDLLFLLVFLIVGIVSFTIAFTFGILPVKWTMAAAGILLILFLILFM LSMKKLPKWAVIVKRLFILLLTVVIGTGGYFLDKSRSTLHKMSKNAAGSTTEIYVVVKKG SGIDSLSQLEGKTIGYQKGVDKKNAAYAREKLDSEVGNTTPKEELDYTTLYSDLNLETVN AFVISDSYYDMSKSNIDGFADSVDIIQTYKKKNDAASGPDIDVTKDTFTVYLSGLDNMGS PDQQTRSDTNLILIVNPKANHIDMVSLPRDGYIPNAAYDYKNDKLTHTGNDGIENSVETI QNFFGIPIDYYARVSFNSLIEIVDTIGGIDVDVEIDFCEQDENRSFKKEDLICLKKGKQH LNGKQALAYSRHRKTKGYDNAGRERAQQRIIKAIINKLISANGLTKVNDLMDIAPNYIIT NMPAEKIADFVSGELNELKPWTISSITSDNGVYEDLYVASLDPSLGVSNVYLFSRDEVHA VVNAYDAARRQLQMNSFTFNLNDLYANTPKINTSENIRYADMAENPQ >gi|312957022|gb|AENW01000007.1| GENE 117 120263 - 120481 58 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQIEFNKAAIVRNKKLHGAGYVMQEKKDTKIGYIPSYMRGYISFYLSFSSIALEKSTADS LPYPHSVCFPRY >gi|312957022|gb|AENW01000007.1| GENE 118 120698 - 121516 678 272 aa, chain + ## HITS:1 COG:lin2067 KEGG:ns NR:ns ## COG: lin2067 COG0005 # Protein_GI_number: 16801133 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Listeria innocua # 5 257 4 256 272 248 48.0 9e-66 MHVREEINEAYEYIRKRTHYTPAIGIILGTGYHQLADMIEQPEQYRYADIPHFPVPGVAG HEGTLIIGRIQGKEVVVMKGRCHCYEGYSPSRVTLPVRVMKRLGVETIIITNCSGQAGES VKAQDLFVIRNHLNFSGFNPLIGENLEEYGERFPDLAYPYDRDCIQQIKELAAQEHIELK EGVYAMFSGPSYETVMETYMAARLGADIVGMSTIPEVIIANHCGMKVLALSGVPCPAAAY SDQEITHEQVMENCQSISDKAMILIGRFIKEL >gi|312957022|gb|AENW01000007.1| GENE 119 121528 - 122202 685 224 aa, chain + ## HITS:1 COG:STM0757 KEGG:ns NR:ns ## COG: STM0757 COG3201 # Protein_GI_number: 16764122 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Salmonella typhimurium LT2 # 34 218 23 233 239 72 29.0 5e-13 MNIIKKSTELTKSPIFAILSCLLCILAGYSIKSSLIEIFASVMGIINVWLLSKEKISNFI FGIITVLAYLYIYYTTGLYALAILACFQVIFNIYGWYYWGKGDDGNSTKTSGLNRQGQLL WIAIILLLWAVWGYVEINILHAQNAILDSLTAILGFIAQYWLSRKLYENWILWIISNLLF MVIYVLNGYFIMLILVIIQFILSIAGLIEWYESYLEQGRNKIMF >gi|312957022|gb|AENW01000007.1| GENE 120 122265 - 122900 613 211 aa, chain + ## HITS:1 COG:no KEGG:CPF_0388 NR:ns ## KEGG: CPF_0388 # Name: not_defined # Def: cyclic nucleotide-binding protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 4 210 5 211 213 233 54.0 4e-60 MKPDLTTFIAACPADIRSHFQEQTYSFQDKLMEQNKKSDCIYILLNGIVKNYHSEINGNV YIEDIDTGVTIYGELEALIDKETVSTVEAVTECRVLKLENAQFLKWLRADNAFTLYITTL IAQRNYDCSKRERVNAFYPLKYRIMYMIYNTLCKKDLTITKDLLVEGTGSNIRSINRVVH TLIRDGILDYKSGIITVHSMERLEEEIKLYS >gi|312957022|gb|AENW01000007.1| GENE 121 123270 - 124280 1294 336 aa, chain - ## HITS:1 COG:STM2753 KEGG:ns NR:ns ## COG: STM2753 COG0673 # Protein_GI_number: 16766065 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 331 1 332 337 318 45.0 1e-86 MKKVNIGVVGAGIYGNYHIRTYSCDPHVETVVFCDLNEERRAATQNRYQIRGYADVKEMI TAEKLDAISIATPDPYHYEPARAAMEAGIKYLMIEKPLATSVEECEELIAMAEKYGVQIA VDFHKRWDPAYNNMRDEILMDKENIIRGYMSLDDVIDVPMNWFTWTDQSSPSWFLGVHCY DLIRYVSGSEVESVYAVGNKQVLKKQGYQTYDSIQAILTMQDGSSWTVENSWILPNTYPK SNDGQLVIVTEHKYLKNESYRGVKTYTDKKASLPNYIFMKFDEHHASGFGLEPMQDFVSD IVNQRSFRTNAYDGLQATRIAAAVHASAESGNVIHL >gi|312957022|gb|AENW01000007.1| GENE 122 124404 - 125792 2040 462 aa, chain - ## HITS:1 COG:sgcC KEGG:ns NR:ns ## COG: sgcC COG3775 # Protein_GI_number: 16132125 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli K12 # 7 415 1 403 437 357 48.0 3e-98 MQTVLDIIQYIVDLGSYVFVPILMCIIGLIFGLKPSKAIKAGVTVGIGLIGVSIVSTLTA DSLSPVINEMVKVLNLNLTAIDVGGSPAAAVGFGSLLGAALIIVILITNIVLVALKLTKT VNVDIYNFWYFAITAGFVQLLTGSYWLAILAGVTHAILGLKVADVMAHRTQEIIGIDAIS IPHGFAAASAPLFMLLDKVYDRIPYLKHRKESEEESGEHGIGKVIGSVLGQPIYLGLIMG LLFGVVAGYDFKGIADVTMKTAAIMMLFPTMVKMIVNGLIPISNQAKKFFTTHFKDRELY IGLDSAVTIGHPVTISVGFLMIPVFMVFAAILPGNTTLPLGEVPFAAFYVCFATIVHRGN RKRTIISSLIFIPIVLWISSWAAPLFTELASNAGLSYVQAGQQATTMALGNMFIWLPTVL AQTPVIGAGILIIIDIAVLFGGKVIERYYAKEDAAFEAKYYE >gi|312957022|gb|AENW01000007.1| GENE 123 125821 - 126096 458 91 aa, chain - ## HITS:1 COG:STM1613 KEGG:ns NR:ns ## COG: STM1613 COG3414 # Protein_GI_number: 16764957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 90 2 91 93 76 41.0 1e-14 MKKIVIACGAGLATSSMVREKVEEELKEHGISCEIMQCTLHEVEGYDGQVDLIITTMKVK KKFTTPLVHGSAYLTGINEEAVTQQIMDILA >gi|312957022|gb|AENW01000007.1| GENE 124 126118 - 126588 680 156 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 17 150 18 151 155 89 35.0 3e-18 MGFQFIPQLIETDVCVKDKEEVIRYLADKLKTHGCSDAAYADKVLLREQEYPTGLRTKCA AIAIPHAFDPAVSGNHVALAILQQPIRFCNMEDMDSEIDVDMVFLMAISSAHEQLGMLQT IMRMLGDDTLFTRLVKLHDADEVCRQLNAFIEGQKS >gi|312957022|gb|AENW01000007.1| GENE 125 126557 - 127048 354 163 aa, chain - ## HITS:1 COG:YPO2569 KEGG:ns NR:ns ## COG: YPO2569 COG1762 # Protein_GI_number: 16122787 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Yersinia pestis # 1 140 1 141 147 117 39.0 1e-26 MKEEVLSVDNIQIQERSCDWKSAIETAVKPLIQNGFVEEKYTAAILRNIEAWGPYFMAGP YIILPHARPEEGVRKNQISILSLKKPVYFDDGSIPIRLLMILASVDSKSHLRILKMLASV VTDETTLRSLLKSNTPQELFQCFQAKESKGGREDGISIHTATD >gi|312957022|gb|AENW01000007.1| GENE 126 127173 - 129197 2402 674 aa, chain - ## HITS:1 COG:BH0220_1 KEGG:ns NR:ns ## COG: BH0220_1 COG3711 # Protein_GI_number: 15612783 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 11 514 11 543 556 179 27.0 1e-44 MIPFTGKQLQLIQLLMEQSTPIALDEISQLLHAGRRSVYYIVNKTNEVLQMNALKPVMCK RGAGYFLLDEQKQQLSALLKKRQLQPDVLTPQQRVSFLICYMIYPKAVIHVEDIMQLLKC SRNTVFSDLKNVKEQLKAYGLELRIDLKNGYGIEGKAFNKRAVLLYFLKQLLDEVNYHAL PFLDTALVDDYYGRLQKISSEREHEYRQDNLLSIACMLSIIRDSPEQYDFSLMELRDLCE TQELDLIDRYFQELNVHERLYLALHLLGSKASRELCPQDDEHDIRIFELSSRLVETFERT ACVSFDDKNDLINSIYMHLKLSMYYNRLSIQVVNPLIDEIQKQYKDIYMITQLVCEDLRD LFQMPIIDSEIAYLTMHFGGHLKQGVRCYDEIRILIVCPSGISTSMLLKREIEGLYANVR VVDTASLEHVQEYEQQVDFIVSTIDVQSEVPVIRVHPILSREDKARIASMMMLNFDCYEI NNEKLGGLFSIIASYVKETDMDALKRDVLAYLNRGNSFVGIHDKEQLGLLDILQKEDIQV LEQVDSWKEMIQTASAPLLSRGVIQNSYVQEMIHLVDEYGPYILLANSVAVAHAKPEHGA FRLGLSLLICHEDVYLDEVSAVRYLFVLSDAAHDKHLNVLHEILQLSRNSTLLAQLDVCT SAAEVRRALLHAFS >gi|312957022|gb|AENW01000007.1| GENE 127 129389 - 130990 1996 533 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 151 451 148 436 481 152 30.0 2e-36 MENKKLKRRSLIIDIIMLAVFLMVSIVSFYIAYSFGLLPIKWVTIAAAIFGLLFLILLLL AFKQIPTWGLVIKRLFLILLVAIVGTFGYFMEKSRTTINKMSKTTKVNDDGTTTITTNLY LITSKTSGIRSEAELADKIIGFQNGSDADNLSFAKTSVSKDISSYTAKEEMDYTTLYDQM EQGNVSAMAISETFYNMSKANIKDFEKNVQILKTYSKTDTIKTKEQKDITKQTFTVYLSG LDSTGSPDQQTRTDTNLLLIVNPVANHIDMVSIPRDALVPNTALNNANDKLTHTGIYGID TSVDTISQFFGIPVDYYARVSFNSMIEIVDTIGGIDVDVELDFCEQDENRSFKKDDLICL KKGEQHLDGKQALAYSRHRKTEGYDNAGRERAQQRIIKAIINKLISPSALGYVNDLLDVA PNYVITDMPANQITKFVSSELDNMKPWTISSVISDTGVYDSQQVASLNPLEGPYDVYLFN KDEVHAVVNAYDGASNQLQMESFHFNMDDLYRDTPPINDDPNIIWDTMASTPH >gi|312957022|gb|AENW01000007.1| GENE 128 131188 - 132423 1460 411 aa, chain - ## HITS:1 COG:no KEGG:BHWA1_01494 NR:ns ## KEGG: BHWA1_01494 # Name: not_defined # Def: hypothetical protein # Organism: B.hyodysenteriae # Pathway: not_defined # 51 279 66 307 432 72 28.0 2e-11 MSIEIVLEGQLEKETDKEAFSAFLKQVCDEKKLKLEDYDATVMIDICPEGYIECGYEDRF VSIAAQTNVAGPGFHAFVCTVFDEIISGSQIPLEVNDPTGYYTDRNFENLKYKYFYRWLK DIQGYVLDHIDEEKELCISWPQEYYHPVYREGFVVTPLGYIHRDDFQTRDVEDLADDFFV WNDRKRTARYYRNCAMVLLWKECYFAYSSMNEYTDKIANSILDYLEAAYEKDDLLPLPMD AYRSICTAIHREILIQHADELKIAHLGYRNGVVSYPFGSWSIPAHGCSEKSFDETTQTMH FMAPYKDAQEPWKWMIKANAYTFEKEIPTFLKKLEKPVDVMDAFSFEKEAVICKGIVENL DEYYTVVVQANCEKDTLFLECIVRDEQDIAMLKEWCQGIKHRVTISDELHS >gi|312957022|gb|AENW01000007.1| GENE 129 132465 - 133145 792 226 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402006|ref|ZP_06646146.1| ## NR: gi|293402006|ref|ZP_06646146.1| ferrichrome-binding periplasmic protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 226 1 234 234 212 49.0 2e-53 MNQIAKKLLLCVGILSVTMVSGCSSDDSSKKKETAKNEEKAEVKMVANDLYVEPLNPTQA QIEAYNKLSQAITSEDRKEEATMVAVSFAFDFFTLSNKEDAQDLGGLQFIPSDKIRNFME FAQAYYYGNYPTIVNEYGKKSLPEVSGYKVDAVEAKDYTYNGSACRGYDVKLTLTYAETE VESLKKSMTISVIEIQDYEYDRTKNYKKDVIYDGEMKNVYRVLAVE >gi|312957022|gb|AENW01000007.1| GENE 130 133186 - 134343 1230 385 aa, chain - ## HITS:1 COG:CAC0906 KEGG:ns NR:ns ## COG: CAC0906 COG2872 # Protein_GI_number: 15894193 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain # Organism: Clostridium acetobutylicum # 1 383 1 384 387 113 24.0 7e-25 MINKLYDNCFTTELSTKVLEVREDNGLFWHACKDTIFYKEGGGMASDIGMIDEHMVLDLK YEEGHMWHLLDTRLEGTVFMSVNLHERFRKCQIHTAQHLISAVLGNVYKVETLAHHVGDE ENDIEFSFEDFTDKMAFELQVLCNGLIRDDLEVSIQYPTRVEASKMAKGKNLDRDDLRVV RIGALDYNMCGCMHVPSLRYLQMLYISGYEKTAKGYKIKYLVGDQLLDCVSRRYKVLDEA SRSLAVSHLYVNTGVNRLINETRQLNRDIVVWKQKYYEMFGKELGQSEEDIIIHFFDDID VKSEADVAKYVTENYKKAVIFVAKTYDNVHVVVASHKDMDFDSAKVFKEIADAYHLKGGG SARLSQGGGMYSEEIIKFVKTHRFS >gi|312957022|gb|AENW01000007.1| GENE 131 134468 - 135349 904 293 aa, chain + ## HITS:1 COG:SMc01131 KEGG:ns NR:ns ## COG: SMc01131 COG1092 # Protein_GI_number: 15964142 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Sinorhizobium meliloti # 11 289 99 382 384 202 38.0 6e-52 MNQVAKHWKDYECIDAGSGEKLERWKDIILRRPDPQVIWPMEENSMWNSPHAHYHRSKSG GGSWEYKKKFKDSWTVSYGDLRFKVSPTGFKHTGLFPEQAANWDWMMDTIQGSGREDLRV LNLFAYTGGATMACASAGAAEVVHVDASKGMVNWAKENMMLSHLENHKIRFIVDDVLKFV AREKRRGRTYHAIIMDPPSYGRGPNGEIWKIEEQLYPLISACMEILDENPLFFLVNSYTT GFPPTVLYNLLRTTVGKKHRDGQIDAGEIGLPITATDSVLPCGIYGKWVSSKR >gi|312957022|gb|AENW01000007.1| GENE 132 135553 - 136035 616 160 aa, chain - ## HITS:1 COG:SP1959 KEGG:ns NR:ns ## COG: SP1959 COG0105 # Protein_GI_number: 15901782 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Streptococcus pneumoniae TIGR4 # 3 155 2 136 137 76 33.0 2e-14 MKQKTFLMLKPDAFAGGHAQEVLRELRSHGLVIEKSCTLTVTMGVMKTLIDHYAGVIDSM SKDFNFPGKLFNSFYYDGPHTIMPMEVSYEGSDDIITLTRTLAGKTNPQDAGADTIRGKY SDDSYEKASAAVRLVNNVIHASDSHESAQRELNIWKSYLK >gi|312957022|gb|AENW01000007.1| GENE 133 136114 - 137877 2038 587 aa, chain - ## HITS:1 COG:CAC0291_2 KEGG:ns NR:ns ## COG: CAC0291_2 COG0685 # Protein_GI_number: 15893583 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Clostridium acetobutylicum # 307 586 4 285 285 233 39.0 8e-61 MIENYLNTQGYMLFDGAFGTYYAQRYAEDQKPCEMANLNHPKRVAAIHQEYIEAGADAIK TNTFSANEQHLECSWEMIRRILQEGYRIAKEAAKDKVKVFADIGPIMEQKNVSLAQQYQQ IVDVFLAEGADCFLFETLLNTQELHAVTSYIKEQCPQACIIVSFAVTADGYSRQGIAMSR LLQDCLADEHVDACGLNCVCGPMHMKRLLDSIDRTQKPILIMPNAGYPTILANRTYFRDS STYFAKEMREIWQKGARLLGGCCGTTPVYIQKTREALQEHKIIQKVQQPVQETERIPQED HNPLRRKLQRKQPVIAVEFDPPANCEIERFMNHVEFLKEAGVDAVTIADCPIARARVDSS LIACKLHRELGLDVIPHMTCRDRNINATKALLFGLQIEGIRNVLVVTGDPIPSEDRQEVK GVFNFNSQILAGYIRDLNATMFTSPFMVFGALNLNAVNFEAELAKAKRKVTQGMEGFLTQ PVHSRQALFNLKRARKELQAYILGGVLPIVSHRNAVYMNNEISGIEVDEEIVAMYEGTTR KEAQKLAVDISCKTMDEMRPYIDGYYLITPFNRVEIIADMITYIHKQ >gi|312957022|gb|AENW01000007.1| GENE 134 137874 - 140234 2780 786 aa, chain - ## HITS:1 COG:TM0268_2 KEGG:ns NR:ns ## COG: TM0268_2 COG1410 # Protein_GI_number: 15643038 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Thermotoga maritima # 285 784 8 481 483 268 33.0 3e-71 MEIENKIQFLDGAMGTQLQDKGLPAGASPELFMMEHGEIIEDVHAAYIDSGSDIIYTNTF GANAKKLCKSQYTVEEVITRAVQLAKSAAKRRNGVQVALDIGPIGELLEPNGYLPFEEAY ELYRQQVVAGEQAGADLVIFETMSDLYEVKAAILAAKEHTQLPVFVTMSFEADHRTFTGC TTASFALCAEGLGADAIGINCSLGPDQILPIAEELAAMTNLPLIIKANAGLPDPLTNTYS IDAAAYARMLLPYTKLPLAYVGGCCGTTPQFIQELKNTLPTTIAVEKRKRRIGSYACTPT KCLHIQDVHVIGERINPTGNKRMKAALQEHRMDEILAIAMEEVEGGADILDVNVGLPGID EKEMMVEVIKELQSVIDLPLQIDSTDPAVIRAALRAVNGVAIVNSVNGEAAVMESILPAV KKYGANVVGLTMDEDGIPACAQKRLEIGTRIVETAQRYGIAKERVFLDCLTLTVSAQQSG AKETLQALTAIREQLGVHTVLGVSNISFGLPSRILLNQSFLTMAMQAGLSMPIMNPNQAA MMDAVRSYRVLQGIDVDSQEYIRIYAQQKREGGKPHIESVHINIEESIMRGLKEETRQLC TKLLSEKEPLQIVNEHLIPALDAVGARYEKKEIYLPQLINAATASQCAFEEIRRSVQAGG LESISKGKIILATVKGDVHDIGKNIVKVVLENYGYQVFDLGKDVPVETVVETAIKEQVRL IGLSALMTTTLKSMEETIQALHESGHECKIMVGGAVVSADYAKQIHADYYARDAKESADI AKEVLG >gi|312957022|gb|AENW01000007.1| GENE 135 140224 - 140883 664 219 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01383 NR:ns ## KEGG: EUBELI_01383 # Name: not_defined # Def: 5-methyltetrahydrofolate--homocysteine methyltransferase # Organism: E.eligens # Pathway: Cysteine and methionine metabolism [PATH:eel00270]; One carbon pool by folate [PATH:eel00670]; Metabolic pathways [PATH:eel01100]; Biosynthesis of secondary metabolites [PATH:eel01110] # 4 217 6 225 227 178 41.0 1e-43 MRRELTDISEEEILHFLGYGENNPDEQTRSVLKEMKQLVLRYSEPRVVYRVFGLHDAQPV DSGVQFIGSDIQRLLKESHACIFMAATLGSRIDKEMKKLQVQDMMKAVLFDSCASAAIEA VCDNLQKELQKSYPYLTDRYSCGYGDLPITLQASFLQALDAQRRIGLHVNESSLLVPMKS VTAIIGIADRIQPAVLRGCGHCQLVKQCAYRKRGKFCGN >gi|312957022|gb|AENW01000007.1| GENE 136 141237 - 142094 940 285 aa, chain - ## HITS:1 COG:CAC2424 KEGG:ns NR:ns ## COG: CAC2424 COG4667 # Protein_GI_number: 15895690 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Clostridium acetobutylicum # 5 283 4 280 283 149 32.0 6e-36 MAEKIGLICEGGGTKAAYTCGVLQCFLDYDIEFPYTVGISAGAEVLLPFVAKQKDRLRVT GVDAACESGAIGVSPLIHEKGVFGIGYVCKFIEKHAPLDYEAFMNNKTLLDIGVYNMDTN EVEYFPKEYFDPEEQILMQASCALFLLTRPYKFRGHTYMDAGLVDMIPIEQSIRQGNTKH VFISTKEENYVRKPAPGWQIQLAKLMYPGNKTIRENLKIRHINYQKQWQIVKELEEQGNA IVLRPSADYGVTRYTHDKELLGRWFDLGYEDTKNRLDMIREFMEK >gi|312957022|gb|AENW01000007.1| GENE 137 142285 - 142677 332 130 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNTSALFIIDDVIANRLMELEDEHISHQVLHEESFHKHLIDIQEFPIAEKISDHMLDRR YLIIRSWQEIRELLHELQVEKNIYAWIKLFPLQLYTDPAYEKGYITESLRTAELLLIRAV QEQKYVMFYC >gi|312957022|gb|AENW01000007.1| GENE 138 142784 - 145297 1752 837 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401963|ref|ZP_06646103.1| ## NR: gi|293401963|ref|ZP_06646103.1| cell wall surface anchor signal protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 245 829 206 817 821 297 36.0 3e-78 MKTSVALYAQWKKTDQKYTIQHFDEDSNKKIHDDEYKDAKFGDIIEGSSCQLPIENFTFT KANTLTVDTDNKKNIIKVYYSKDENKDQIPDKYQIKVMYKAVNGTIDAVHENEPGNKMFY VSLYKNGKYATVKDGGIGHLSDEQIATATAARGYDQNSLKWSPKTPTTKLDLNEDTSFIA EFTKGSYDYSIEYYYDGVKGKTDTKKAAFEEVITLDPEVSVTYGGSPYALDKVKNNPLTI DTEAANNIIRVYYAKDTNGNGKPDYKEETYNVNFVAETNGTLTGTTLYSGILANTRIGNI TGFAMPVPTANLNYAFDKWIVRDVNHPEGIEINDPSTYIIHSNTVFYASFEEDHHGSDST DPEQPDNVPDKYQAEVSFAAVNGTVSFNKTYVTLYDKQGNYAEDGTGRLTQNQIATATAN SGYHFVNWTPQTPKQGMEITSEGAVFTANYAINTYTAAVRFLNEDTGEELAPAITVNDIE HGTYLYGEAHRISIPGYVFTVADTKVVESEHVTVNVYYSADTRGGLPNPDTTPDGTPDKY QVRFAYVADTNGSVTGTTVEYVSRPGNNTTAAVRPQALVDAIANDGYSFMSWTANGNAYV NTDAMRNTYFTEDTVFTAGFAEVVAPILPTPVTPTPPAVTPQNPGTPIPAAPAAPQIPVN PIAPPIVVPVIPTPAPTPAPNPGPIVNEDDPDQPQGGESTEVQENPTPKGGGSQNEWALI NLICAGGTVLLGLFLLLSKLKKEEEEEDEKTSAMRNDEEQSNGYKRRKWLRVASTITAVV SVIAFFLTEDITLAMVLVDRWTLLMAAFLIVQVIFVLFGRKWKELDDNKNNAETARS >gi|312957022|gb|AENW01000007.1| GENE 139 145294 - 145836 645 180 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKGFSKLLLAIVMTLQLVPSSMTTIVANDDIAYADDFVQITTENKPIAVYETGSGDIPE AVSKLNVAVHVDGAEKTSGVLTFGSATNPEKTEITANANYAVEQVTVNGEAFDNSIVYNR EVGESEKNLVINIYTKATATIHYQDLEGNRLAADDVKEGKLHELLTMDQEPGMQHMRNLQ >gi|312957022|gb|AENW01000007.1| GENE 140 145982 - 147154 1126 390 aa, chain - ## HITS:1 COG:BH2016 KEGG:ns NR:ns ## COG: BH2016 COG3947 # Protein_GI_number: 15614579 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver and SARP domains # Organism: Bacillus halodurans # 27 260 115 337 337 65 22.0 2e-10 MNSSKMYIHLFDGFTIEYGGEVFNMRDYLSRQSLSLLEVLILQDQNNVSRDFLMELFWEN SDNPLSSLKFNIFRLRKLLKEIHTFQDIEFIHTEKGGYRFQPEVETIVDTSLFEKEFAAI EKAASYDDNTSVHARIIIDLYDGGLYNDTEQLWFMQKVEYFRNVFLSVTDKLCAYYLRSA QYAELKSIALKAATLEPSVEENHFYYIQALISEGDYAAAYEYYQTSTRMLVSEYAISLSE KMKELYSDIIGNNEEKKNIEGITSYYKSKEISRGALYCDNTAFDYIYEISMRNAVRENLR YFLFIFEIKADGDDEKRLEKLLEKAKVSIQSSLRSGDVFTRLNRYQFLVLLPCRLEDGAY RIAQRVSSSFQGKVRNRKERLHYYIQNTNQ >gi|312957022|gb|AENW01000007.1| GENE 141 147567 - 149105 1803 512 aa, chain - ## HITS:1 COG:CAC3316 KEGG:ns NR:ns ## COG: CAC3316 COG1502 # Protein_GI_number: 15896559 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Clostridium acetobutylicum # 2 512 1 510 510 509 47.0 1e-144 MIRKLLSLLHNKILIVSILILIQLFVFFGIVFKLSEYFVAIYFILIALSFCMSIYIINKN DNPTYKLTWVLLIMAVPVFGGLIYLLFGGQKVPKELRKRDSEALENYQEISWQNTEIMEA LEAEDPLAHKQANYLWKNAIFPIYNHTETTYFPVGEEKFKAMVEELKKAESFIFMEYFII APGVMWDTILDILIDKVKQGVEVRVMYDDAGCITTLPQDYYLTLRRLGIQAKVFNPIKPR LAMQMNNRDHRKILVIDGKVGMTGGINLADEYINQKERFGHWKDCSVMIRGEAVWNLTLM FLQFWNYDEKEKDDVFSYKPDFKVFENIHNDGYVQPYSDSPTDEENVGEYTHINMINSAN RYVYATTPYLVIDNEMKTALLLAAKNGIDVRILVPHIPDKWYVFAVTRSNYKDLIEGGVK IYEYTPGFVHGKSFVVDDKMAIVGTVNMDYRSYYLHYECGVWFYRSKVVMDVKRDYLETL SKSHQVTLEECRQVRLSIRIMRAILNLFSPMM >gi|312957022|gb|AENW01000007.1| GENE 142 149123 - 150076 1037 317 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914449|ref|ZP_02076664.1| ## NR: gi|160914449|ref|ZP_02076664.1| hypothetical protein EUBDOL_00453 [Eubacterium dolichum DSM 3991] # 1 313 1 312 314 348 55.0 2e-94 MDKTVLEKYTKTYGTRFSRRQKKRFIEALHQDFHALGYEPTMIEGKKLLSHAHNYLYGNM KQMKTVIVVPYDTPERKFWKKVLYFPFDGTKTANKTMVATYVPIFLFFALIFGGLYGLQP LITSTGLASLISCGLFLLTVMLMYWMMHGFHNAHNYNRNSATIAAAVEIAKGLNRDERKK VGFLFTDKNKMRFIGAEAAAKDLANAGKNPTLICLDCIAKGSVVQIGFNPQNRKLANEIA KYHPKKKSIDVIKLNEEMRTQNAMAYFKKAVVISCGELDDAGSLCVIGTGTGKDRDIELE TLDGNITMVKEYLHNQK >gi|312957022|gb|AENW01000007.1| GENE 143 150134 - 150343 114 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQGYPTKKRTLFLCIPFHYCYYRGGCNLSCIRLLLTCTLQLPYSKWQRYSMELLAVTKY ASRKAHIMV >gi|312957022|gb|AENW01000007.1| GENE 144 150368 - 155191 4714 1607 aa, chain - ## HITS:1 COG:BS_sacC KEGG:ns NR:ns ## COG: BS_sacC COG1621 # Protein_GI_number: 16079757 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus subtilis # 518 1000 32 513 677 254 35.0 8e-67 MTRKTTRMLTALLSCSMAVTNVVPFHVMAETAPGDPQEEQVPSTKNQEQDTKETAPVSLT NFKGDHVRSEGGKVMLDNTGGDNFAMSEDSKVIADDFHYSADLTIKSGDAQCAALLVGVG DRNDPSKAWRAANVIRHEGENKMRMFRVPGDHNYQPMQVLNDYDSTKTVHLDLDIKANGD FTYKVTSEGGSENVMSGNMDDWAGGYIGVLTFQTEAELSNIQFTDRTVRADDSLFHTTLE NLRGLQGSWKITEKGMHSQGSGDNFAISDTKIENFEYSANINNLDKKGAGALMFRVQNPD NPQAGCYVINADYTHNIFKLFEFPTGGSIAEVPLSDVEPNADGSYDIKVIVVGEDIYVYA NGKGIMREKDSRHKGESYLGLLTWDGNIEYQNLNHKAASELPAVEEAKLSDFKILTNGVT ITPTFDPNVKNYGMDIPAGVDRVVIKPESSGDVYITLKDRNNKVTKEKQKVTDTFTLTAE DFDMNFLNMGVTIEKDGFSENINFAVNKWLSTEELAQQPYRAQFHVTPQINFMNDPNGMV YDSTDGYWHLFYQYSPNNNFYKQSQAHVRSRDLVHWEQQPLGLQIDEHGLIFSGSAVEDS ENTSGLFNNKPGESKLVSIYTYHDEKTGKQSQGIASSKDHGVTWQKYAGNPVIPNEGNTL SGNDFRDPKVFKIDGDAKDKWYMVTAGGAAQIHVSDDLIHWEKSQPLKYKNGEQILSECP GLIPAKVNGTGETKWIYNGSAGFYVVGSMKPDENGIYKWTAESDKIDIDSNANPWGGFGK YATMTFYRDGTGKNRQIGISWLQDFIEFDGKTYKGLQSLPQEYGLKQDADGNYIVTSNVV EEVDKLRDTKHILYQTENKKVSSSDANILRGVSGIRYDLEGKFTLGTAKEFGFKLRKGNG KELIFKYNRETQNMYVDGRNAGYHVNSGNFSYTLKPLDGNKVKLRIIIDQGAVEAFGNDG EANISTAMYQENSNIGMEFFCDDGDVTIDQLKIYDMKSMYTGKSGSESEAPQLYLSAPRE AQVHTEFRVDTNMYPNMESGDVVWTLDPGLQLVKEEKGSIVVSGSKEGTYKIKASAQGLE REVEIKLFTSSFASNIPDWNLDGGIWAKTADGVIGSNTGGDSFLIHDTRIYRDKPFIYEA DMHILEGTAAGIVFGVSDRNNPSADWFCTNIERKDDGSSIAKLFKNQNGEIWNVTKVIPA KKTKAATQAHLKVVYDGAGKLEYWLDGEKILERSNVDMQDGYLGVQTFRSTTVFNNVNVQ YPGASVVSLMEKIPALTIAFGDKTLQDQLPKQILVKLDNDVELLETITWNLEDVNVNKAG VYTLRGKAAGHTIEVKVTVRADKKELQKLLDQAKTYVEKDYTKDSWKAFEAAWYRAAAAY ADETATQDDVNSCAAALEKAMQGLEKAVITADKRDLKELVASAKKIKAEGYTANSYAALE KAIAAAEKVLANEKALQSEVDTALKNLKQAVLALEIGQGTANRDQLQNLVSILKTVKKEG YTAASWEAFVKALRQAEAVLANESADEAAITKAYEALQQSYRKLQPVSAGDDEKPQGDGQ KEPSKPDAEHPDTGDTTSTGAAGMLTLLAGGAAVVLRRRRKQGKSEN >gi|312957022|gb|AENW01000007.1| GENE 145 155345 - 156022 763 225 aa, chain - ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 218 1 216 225 210 47.0 2e-54 MTKIMIAEDQQLIRESLKIILDSIEGFAVTTVVGNGEEVLQHLEIKRVDMILMDIRMPVM DGVECTRIVKEKYPNVRVLILTTFVDDEYVMKALAYGANGYILKGVSLGELKYAIETTME GGSVLNPYVGAKMIHMMHTEKGLKMENQDHKRVNQCVRKLSAREWDIINAIAKGMSNREI AEKMIFTEGTIRNYLSIILEKLQLRDRTQLAIWYLQSGAKLRHAC >gi|312957022|gb|AENW01000007.1| GENE 146 156526 - 157188 685 220 aa, chain - ## HITS:1 COG:PA2299 KEGG:ns NR:ns ## COG: PA2299 COG2188 # Protein_GI_number: 15597495 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 4 208 11 229 249 74 25.0 2e-13 MATPIYRKIKDLIMQEIEDKAANSPIDSERDMAVRFDASRMTVRKAIDELVDEGFLYRDK NKGTFVADRKLLKKNTAAEMLQEEISEFIVMYFNVKDAADIAPILEIDQDDQVLSVVRLN TVNSKPTSVEEIFFIRNQISDADMKNLKNLLDMNDYVKNGRVTQKFIPMLVPVQFANLLK IKMNTPIIRVESVISSMSGKPLVYVRAYNNPFENVIEITL >gi|312957022|gb|AENW01000007.1| GENE 147 157210 - 158295 1258 361 aa, chain - ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 360 1 360 364 371 49.0 1e-102 MARLGISLYPEHSTLEKDKAYVTLAAKYGFKRIFTCLLSVDKEREEILAEFRELIDHAHS YGMEVILDVAPFVFEKLHVSYDDLSFFAEMHADGIRLDEGFDSLKEALMTYNPQNLKIEI NASLGTKYLDNIMSHYPKLENIITCHNFYPQRYSGISYEHFEKCSQDIKDLNIKVAAFVS SQEEGTYGPWPVNEGLCTLEIHRDLPIDVQARHLFATRLVDDVIIANAYASEEELSTLSK IDPGKLTFKIDFEADLHPTEEKILYEHPHFVRGDMSEYMARSTMPRVTYAKESVPPKNTR DLKRGDVVIVNDEYSRYKGELHIVLKDMPNDGRKNVIGHIPEDENMLLDYIKPWKSFGFM R >gi|312957022|gb|AENW01000007.1| GENE 148 158330 - 158800 535 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401797|ref|ZP_06645938.1| ## NR: gi|293401797|ref|ZP_06645938.1| hypothetical protein HMPREF0863_02078 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 152 1 152 159 147 53.0 2e-34 MIKVEEKLYVNADVFFDKIAESIAYDITASTGKNIRPKQIHKGFSYTKDMKNKMKREGKV KVTITDFEAPRIYKAKFESSQGINTISYEIEQLDEDHIGVTYMEDFSGASGAKSVNFKIM SFFYNRGAKKKAVKLLRNMESYIQNEAKEKSEATES >gi|312957022|gb|AENW01000007.1| GENE 149 158813 - 158983 206 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRWGLFAVTIGCIIMMYSQTYNDFSQKILYCICGVTVLCLGAFMVYKDKKNVKKK >gi|312957022|gb|AENW01000007.1| GENE 150 159017 - 159238 346 73 aa, chain - ## HITS:1 COG:no KEGG:lse_2621 NR:ns ## KEGG: lse_2621 # Name: not_defined # Def: hypothetical protein # Organism: L.seeligeri # Pathway: not_defined # 1 71 1 71 73 67 50.0 1e-10 MIYISCGLNQEFIIDLLEKTTEEGVSFKYEGKTGIKLAFHVNTEDLDKACAIAKKTIKAT PIGSVMYFQVTTK >gi|312957022|gb|AENW01000007.1| GENE 151 159270 - 159581 468 103 aa, chain - ## HITS:1 COG:SP2024 KEGG:ns NR:ns ## COG: SP2024 COG1447 # Protein_GI_number: 15901845 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 2 99 9 106 108 82 47.0 2e-16 MEGLELICFEIISSVGMARSLYIEAIQEAKAGNFEQAQELIKQGDESFTEGHHSHAKLIQ QEAGGEATQMTLLLTHAEDQLMSAEAFKILSQEFMDLYKEIKK >gi|312957022|gb|AENW01000007.1| GENE 152 159657 - 161078 1604 473 aa, chain - ## HITS:1 COG:lin2856 KEGG:ns NR:ns ## COG: lin2856 COG1455 # Protein_GI_number: 16801916 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 473 1 450 454 401 51.0 1e-111 MEKFTAWMEKHFVPIAAKIGSQKHLVAIRDGFIGIMPITMAGAVATLLNVFFRDLPNNYL PDWHIAETFQWLIGINGNVWWGTLAMLAIAFAFSFGYHLAKAYDVNPLAGGLVALASFVT ILAQSATFNYQLPDVAVDALNTLKSAGLDVALNDTKDAILLYNATGWGFLPYAWTNSGGL FSALIIGLISVIIYAKLMIKKVTIKLPEQVPPAVSKAFAAIIPGTIAIYTAGIIQFLCTE FLGNGLPELINQYLQIPFQNLSQGLGAIIILVFAVQVFWFFGLHGPNVLAPILDGGYIPL LNDNTNIYNTAMAAGKSLNDVVDQMFVWTRGSFDAFVWMGGSGCTIALLIAIMIFSKRDD ARAVAKLSLPMGCFNINEPVIFGLPIVLNPIYFIPWLITPVILATIAYLATASGLIPPVF ITVPWVVPPVIYAILATGGSLMAGVIAAINLVVAVLCWIPFVIVANRMNNVEE >gi|312957022|gb|AENW01000007.1| GENE 153 161171 - 161473 449 100 aa, chain - ## HITS:1 COG:lin0393 KEGG:ns NR:ns ## COG: lin0393 COG1440 # Protein_GI_number: 16799470 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 99 1 100 100 99 58.0 2e-21 MTNILLVCSAGMSTSMMVKKMQEAAAEKKIEAEIWAVGDADAVNNVEKMDVMLLGPQVRF LESKMKAIAGGKPVAVIDMQAYGTMNGAKVLEQALKLLGM >gi|312957022|gb|AENW01000007.1| GENE 154 161959 - 162456 620 165 aa, chain - ## HITS:1 COG:no KEGG:Ccel_1541 NR:ns ## KEGG: Ccel_1541 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 1 155 1 155 158 237 70.0 1e-61 MANEDKKDFNAMLHDSKDMPKMKIITDTESIKKYGGSRMYFAPPIDYDTLMRRVPFGKVT TVGELRDYFARVSHADFTEPITAGIFVSIAAWASVQRRDDPTPYWRTLKANGELNAKYPG GVSAQKEKLEAEGHTVICRGRKNIRYFVKDYENALFDFTQGEQAS >gi|312957022|gb|AENW01000007.1| GENE 155 162582 - 163058 293 158 aa, chain - ## HITS:1 COG:CAC1388 KEGG:ns NR:ns ## COG: CAC1388 COG3837 # Protein_GI_number: 15894667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Clostridium acetobutylicum # 20 151 24 153 154 108 39.0 5e-24 MIQHMDQIAEEFISQDTHGLITKAIGAAAGSERLYVNIDRIPPESFSTKYHSHSQQEEFF LVLSGNGTVRLNDKSCPVTKGDFFAKPSGQNIAHSIYNFGDTDLILLDIGTVEQEDTCYY PDEDMYLLKSNGQRRIISGSDFNKEWTTEPNADESGTL >gi|312957022|gb|AENW01000007.1| GENE 156 163359 - 164003 778 214 aa, chain - ## HITS:1 COG:SMb20313 KEGG:ns NR:ns ## COG: SMb20313 COG2376 # Protein_GI_number: 16264047 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 1 205 1 206 213 183 49.0 2e-46 MEYIRNEKNVKIAEAICEAIHENAAYLSEIDGAIGDGDHGVNMNKGFLMAKERLRADMSF SESMKTISRTLVMDIGGSMGPIYGTMFSRIARACKQEAKLTKEVFLKALQDALQGLQELA GAKEGDKTLIDTLAPAIRAYEQAMQEGRSYAACLCALQQGAEAGREHTKELVAKIGRAAR LGERSRGYLDAGATSCCIILTTMAHQMCADILEE >gi|312957022|gb|AENW01000007.1| GENE 157 164003 - 165013 1227 336 aa, chain - ## HITS:1 COG:BMEI0396 KEGG:ns NR:ns ## COG: BMEI0396 COG2376 # Protein_GI_number: 17986679 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Brucella melitensis # 1 327 13 338 342 390 63.0 1e-108 MQRIINDPNMVVEDMLKGFAKCHRDIIHVDEENPRVVISNSFNKQKKVGIVTGGGSGHKP AFIGYCGEHMADAVAVGEIFSSPTAKSFYDSIRAVDQGMGVAVLYGNYAGDNMNVKMAME LAEDDDIEVRTVVANDDVASAPKEDITKRRGVAGEIFLWKVGGAKAAQGADLDAVISAAQ KAIENTRSVGVGLGPCTIPANGKPNFQIEPGTMEFGIGHHGEPGVCVKPLGSAKQMAQEM VDMVIRDVPFQSGDEVAVLVSGLGATPVMEQYIFYHEVEELLQQAGIRVYRSYVGNYFTS LEMNGVTLTMMKLDEELKECLDMDCACVGLTQVRRP >gi|312957022|gb|AENW01000007.1| GENE 158 165027 - 165476 589 149 aa, chain - ## HITS:1 COG:PM1645 KEGG:ns NR:ns ## COG: PM1645 COG0698 # Protein_GI_number: 15603510 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Pasteurella multocida # 1 149 1 149 151 160 53.0 1e-39 MKLVIGCDEAAYRLKEAMKETIIQLGHEVKDIGVYHEAPSLYPDIAQKLCACITDGSCER GILLCGTGIGMAITANKIPGIRAAVGHDLFSVERSIKSNDCQVLCMGARVIAAQYARLLV ERWLECSFAGGASAEKVARIMEIEQEYRR >gi|312957022|gb|AENW01000007.1| GENE 159 165606 - 166520 1007 304 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0654 NR:ns ## KEGG: Sterm_0654 # Name: not_defined # Def: cupin 2 conserved barrel domain protein # Organism: S.termitidis # Pathway: Tyrosine metabolism [PATH:str00350]; Metabolic pathways [PATH:str01100] # 1 304 1 305 305 518 80.0 1e-145 MAKLFDIMGNFPFKAEDKKPTLIRKSEYSTALYPPNNAFTSDNTFTMVTTDTFMLGIYEL GPGGVFAPLDIHPGDESYYILNGPVVQRSGNGQFAYLETGEGLFMPEGAWHCCHNFSDQK ARILYFITPKAWSESIPPAVIPSDEETKFYKGPNNDTLPDMRGKIQDISRQGCTDDIGAW PVDPREARETGAVYAVRDFEKLNNVHGTKHPMLMRFITSNDYGHFGEFILPAGGYGPRCS DPDTHEGDAALYCVEGPVTVNLVDLEESFVLEPEDTFFIPSGVKYQLVNFENHPVKTVFA ITKL >gi|312957022|gb|AENW01000007.1| GENE 160 166537 - 167562 1471 341 aa, chain - ## HITS:1 COG:CAC0234_2 KEGG:ns NR:ns ## COG: CAC0234_2 COG1299 # Protein_GI_number: 15893526 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Clostridium acetobutylicum # 12 337 7 333 335 248 52.0 8e-66 MKEKLSEIKGALLTGVSYMLPFVIAGGILIALGFAIGGYDIPNSVEEYGNFASTIFWLGK KAFALMVPVLGAYVAYSIADKPGIAVGMVGGALADMQGSGFLGALIAGIIAGYLVNLLKK INLPMALKSLLPTLIIPIIGVGAIGLIMVYVIGTPLSALTTALTDMLNSLGTGNLVLLGI IQGCMLAFDMGGPCNKVAYAFALAAMDAGNYMPMAANFIGSMAPPLAIAVAALVAKNKFT KEERAAVPGLFAGAFGMITEFAIPFAAANPLTVIPSLMAGSAVGCALSYVFGLTMRAPHG GLFVLFALNNALLFIVALLIAGAVSAALLILLRKPAVEAEE >gi|312957022|gb|AENW01000007.1| GENE 161 167600 - 167902 499 100 aa, chain - ## HITS:1 COG:STM4116 KEGG:ns NR:ns ## COG: STM4116 COG1445 # Protein_GI_number: 16767381 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 3 73 8 78 117 83 47.0 7e-17 MKIVAITSCATGIAHTYMAAEAIKKECKKKGYACKVEMQGALGIENKLSEKDIKTADLIV FANDVGISKAERFDAYKDKIVRHTPHQVIQKPDIIFETLK >gi|312957022|gb|AENW01000007.1| GENE 162 167938 - 168420 570 160 aa, chain - ## HITS:1 COG:lin0446 KEGG:ns NR:ns ## COG: lin0446 COG1762 # Protein_GI_number: 16799523 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 4 153 1 148 154 89 33.0 2e-18 MNEVNLSKVLIRDTVLLDVEPFTDKETMFETLAAKFEAAGIVTDAKQYIKALEERETLGS TYMGNMIALPHGKCDAVVKPGIGFCRCKQTFRYCSHDEEGDVRYVFMLAIAANQSSDQYL RVLATLAGLLTHEEFIEVLEHAQSYEEIIQAINTLQSNCA >gi|312957022|gb|AENW01000007.1| GENE 163 168442 - 169314 1013 290 aa, chain - ## HITS:1 COG:PM1373 KEGG:ns NR:ns ## COG: PM1373 COG0191 # Protein_GI_number: 15603238 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Pasteurella multocida # 2 265 3 258 294 177 37.0 2e-44 MLVNMKEILKEAEEKGYAIGCINTPNMETLRAVVDAAEELNVPIIIDHAQVHDPLIPMES IGPKMVEYAKQAKVPVCVHLDHGSDYSFVMRAIRCGFSSIMYDLSALPFEENMAKLKEFT KIAHDLNITVEAELGIMTSTEEDSHGGSIGWTHESIKKTFTDPQQAAEFARETGVDALAV CFGTAHGIYAEPPLLDIERVKAIRAAMPKETRVVMHGGSGVDEEQVRAAITAGCSKVNYY SYMATAASRHIQEYLNERDGKAFWHEVEEESYRFMKEYAKGVLTVFKNGK >gi|312957022|gb|AENW01000007.1| GENE 164 169347 - 170207 1049 286 aa, chain - ## HITS:1 COG:SMb20488 KEGG:ns NR:ns ## COG: SMb20488 COG1082 # Protein_GI_number: 16264218 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Sinorhizobium meliloti # 3 286 4 281 282 134 32.0 2e-31 MRFGVDTFIWSEVFSEKDLWVITKAEELGFSTIDIAIAHPETFPTALVKAELAKTKLEVV TTTTLDAKTNLISPDEAIRKNGVEALKRLVDINKELGSTILGGVNYAGWGCLSGKPKTDE EWNHSVEAMREAAQYAKETHPQLRICVEPVNRFETHFINTAKEGVRYCKAVGTGNMAVHL DCFHMIREETSYREAAEVCGKAYLGYVHVCENNRGIPGTGLVPWEEFFTALHDIGYEGPC VIESFDPSFEELNANCAIWRKFADTGEELAVQGLANLKRIAAGLGV >gi|312957022|gb|AENW01000007.1| GENE 165 170223 - 172181 2125 652 aa, chain - ## HITS:1 COG:BS_ydaA KEGG:ns NR:ns ## COG: BS_ydaA COG3711 # Protein_GI_number: 16077483 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 20 528 21 534 694 99 21.0 2e-20 MIDRMTEKTIRLLLEQKEPITTSVIANEIGVSRSSIKHNLDYVKKTLQKAGVLLNSIPGK GVWLSADDHQRKAVLQLLQENSDHSSSYNYRKKYILDVLFEYNSSYTIQLFAEELNVARN VITKDLEVLEQWLLKFDLKIVKKRNMGIGVAGGEFNIRQAILENNKEFMNEIYGSEQVPE GMDYRISEKFYNYFLEMYDDFDILYLQELLKDVEDDLEMTFTDTDYWQLMEYVAVTLRRV RKGNVIVEKNIMNKLNVNNDQYTAAKNLFDTAIHGLQAYLGLEIRCMAAQFIVFSNHGLD DEINMEYFDAITREFLEHLKAIVANKRFVISEGLVHDVSLFIQKKKAQETFAISKRYDFR QDIKHRFPSLYGITLTTIEEVESCLKISFTDDDIAYIVMLINNAIDESDHPVNAVFISAA DFHTSKYQANKIMRNVENLAISKILHYEDIKESSITKFELIITTVPLELKKNVLLVSREI SDDDLEKISRAITEKQNVEVADRDEAFQLFDPKLILCDVNAKRKEDVISRGCQLLYEKGY VKKGFEKKIWEREKTTPTSIGNSIAVPHGYKTYVKKSGIVVMRLKRPMNWTYEDRIEIVF LMAIDFNTQSEVYNFFQQFYAFIDDRSNIKALKNARDEMEIWEILQQSGITA >gi|312957022|gb|AENW01000007.1| GENE 166 172981 - 173394 472 137 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401808|ref|ZP_06645949.1| ## NR: gi|293401808|ref|ZP_06645949.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 137 9 147 148 131 54.0 1e-29 MLDLQKHKEYLWKYLLTYGKARKKREDYRQLVFPFQDIVIEEGKTVEDYRSEALKQQLEA CSSIEEIFDMISLEYKDYYFLEISALLHDDQTLYSHLLKKTMDTAGITDYISAHNYEYLI KFADEETQQYITQKLTQ >gi|312957022|gb|AENW01000007.1| GENE 167 173613 - 173825 210 70 aa, chain + ## HITS:1 COG:L121994 KEGG:ns NR:ns ## COG: L121994 COG3478 # Protein_GI_number: 15672697 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Lactococcus lactis # 3 68 5 70 72 93 71.0 8e-20 MEKKQYVCPKCGNTQYESDQFQATGGNFSKIFDVQNKKFITVSCTRCGYTELYKQETDAG WNILDFFIGN >gi|312957022|gb|AENW01000007.1| GENE 168 173883 - 174656 411 257 aa, chain - ## HITS:1 COG:no KEGG:Pjdr2_0640 NR:ns ## KEGG: Pjdr2_0640 # Name: not_defined # Def: hypothetical protein # Organism: Paenibacillus # Pathway: not_defined # 69 184 6 120 184 73 31.0 8e-12 MSEEKKEQSTTPESGLDQISLDDENKEELIASDSLDKMMEELKADADGKPQQATQEIEKP VSAAPAEDVKKYKLFFVSDMDEEAEYLHSMSEKGLHFVRKNGIQYIFKKDTPKNYYYHLG YYEKDIRDPDQYVENYKEAGWDNIYHEKGEFNGVWNYFRTEMETGTKPEIFSDRTSRIAL YKRLLTSWRSLLTMLAICSAFIIGLLAFLWLGVNASSITTLGIQVSGVILLLILAVFILY LRLYHKIGRKLEELEKH >gi|312957022|gb|AENW01000007.1| GENE 169 174695 - 175330 382 211 aa, chain - ## HITS:1 COG:CAC2496 KEGG:ns NR:ns ## COG: CAC2496 COG0546 # Protein_GI_number: 15895761 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 1 208 1 208 208 205 47.0 6e-53 MKTDGIIFDVDGTLWDATQRIAEAYTVILEREKIEGKVITADMLASVMGLLNEDIAARLF PELSYEKRMRLIETCCEFECEYLRKHGGRLYPHVEDTLEKLSARYPLYIVSNCQDGYIEA MFAVHDLQKYFRDYECSGRTGKAKFENLKSIVERNHLQQPVYIGDTKTDQVSCCKAGIPF IYASFGFGEADDYAASVDTFSKLAQLFLTEQ >gi|312957022|gb|AENW01000007.1| GENE 170 175401 - 175871 397 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401822|ref|ZP_06645963.1| ## NR: gi|293401822|ref|ZP_06645963.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 152 1 152 153 99 36.0 6e-20 MYRTIKIRLHATKEQKEHLLAYEEVYHTDLQDLIHQLHKHPSSIRYADLCFSDAIEVHSR WLLYQTALKMFNRQLAHKKTSYGKSSTWGPRSFQIKSSRLTLHYGRQFSHRKDTLLMKPL SQELLSLQEHTIIRMDLVHDEFFWYANFLIRIAANT >gi|312957022|gb|AENW01000007.1| GENE 171 176850 - 177776 771 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 307 3 305 308 301 52 1e-80 MEKIYNSITELIGSTPLIRVHRLNKEGKAEILVKTEAFNPGGSVKDRIAYQMIMEAKKAG RLDKDTVLIEPTSGNTGIGLAMTAAALGIRLMIVLPETMSVERRKMIRAYGAELILTEGS KGMTGAIAKAEELHKEIPNSIILQQFENADNPNAHYLHTGEEIWRDTDGKLDVFVAGVGT GGTISGVAAYLKEKNADIRMVAVEPENSPVLSGGAAGPHKIQGIGAGFIPKNYHGELVDE IVQVKDEAAISTAKKLAQEEGIAVGISSGAAMYAALQLAKRDVFAGKRIVVLLPDTAERY LSTVLFED >gi|312957022|gb|AENW01000007.1| GENE 172 178050 - 178463 287 137 aa, chain + ## HITS:1 COG:DR2094 KEGG:ns NR:ns ## COG: DR2094 COG1959 # Protein_GI_number: 15807088 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Deinococcus radiodurans # 1 127 46 174 197 95 37.0 3e-20 MKISTKGIYALEAMIELASRNTACVSIRDIADARNCSVKYLEQIFKQLKKAQLLISIRGK DGGYQIAKDPEEITAKDIILAVEEKLDPVVCLSHTCTRSGICRTQPVWMGMQEQIYKVLE SKTLKYLTDIYRNEVSA >gi|312957022|gb|AENW01000007.1| GENE 173 178460 - 178852 387 130 aa, chain + ## HITS:1 COG:HI0379 KEGG:ns NR:ns ## COG: HI0379 COG1959 # Protein_GI_number: 16272327 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Haemophilus influenzae # 1 127 1 129 150 87 35.0 8e-18 MKLSTKSRYAARCLIDLAIYGKDHPLSITEIGAREEISERYLELIFATLKKAGFIASARG SQGGYQLIRPIESITIYDIIALMETNTSIVNTQDERDPMKRILMREVWSLIDDNLKAYLS DLTIAELSLS >gi|312957022|gb|AENW01000007.1| GENE 174 179035 - 180063 183 342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764777|ref|ZP_02171831.1| ribosomal protein L22 [Bacillus selenitireducens MLS10] # 158 335 21 210 225 75 29 2e-12 MYLTIKLQLQATHDEKQILRAYSRRFQDEVERIIRRYQKLGSVIFIPYKWVSSDIAFYSK NQVLHYAKTLYEERRLQHRAVYPSSFSCMAKSMQLEKNSIVFMFGQSFLVPELRIRTEIH KQQWKRLWSGELVKADIREIHHDFYAYLLLCVHTPNTAGILNEERKMGVDIGMRCPAVCY TCDGVIRFVGNGREIRYHTRRIRKRADEFIKRTQGKKKQQYHRLNDYKRYIDHCLAREIV NFAIEQKIQIICLEKLYHLQKKFSKHEQICWSYQRLQQFIAYKAKLAGIHIRYVNPRLTS KRCPSCGKINNVKGRTYTCRCGFHHHRDVVGAMNILHAPEIL >gi|312957022|gb|AENW01000007.1| GENE 175 181011 - 181343 256 110 aa, chain - ## HITS:1 COG:lin0887 KEGG:ns NR:ns ## COG: lin0887 COG2337 # Protein_GI_number: 16799960 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Listeria innocua # 1 110 2 112 115 125 57.0 2e-29 MIRRGDVYYADLSPVVGSEQGGVRPVVVVQNDKGNRYSKTIIVAPISKKMSKPPIPTHVI FSDDSLSYVSMILCEQLRTIDKKRLGQWICTLDEKTLEKINRAIRVSLSI >gi|312957022|gb|AENW01000007.1| GENE 176 181343 - 182329 1155 328 aa, chain - ## HITS:1 COG:BS_ydcC KEGG:ns NR:ns ## COG: BS_ydcC COG2834 # Protein_GI_number: 16077530 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Bacillus subtilis # 31 323 71 368 373 133 29.0 5e-31 MKSKIIAGVGIVVLAIALIFAMKPKSFDKQFEKKMSDMNSYILEGNMEIAKGEDVKTYAV EVGYKKADKDFFKVTLTDKELNQEQIILRNDAGVFVVTPSLNQIFKFEGDWPMNSPKPYL LQSISDIVKGKDAAIKEEKGGYLVTSKVSYPNNKNFDHEEIMFDKDSKLKWLQIYNKDNT SELKIVFTKSDYNAKIKDDYFKAPTVLEKSKATSAITAADLPLYPVMVYDAKLENISSMN ANGQTKHVLEYTGDKNFTVVETKKESVKETQTVIMPGEMMDALDVVGFYDGNHLSAVYDN VEFTVFSDDLSPEEMMQVIMSMQVAVMK >gi|312957022|gb|AENW01000007.1| GENE 177 182426 - 182617 259 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKTQKICLILTILFCLNYALSMLLGFHYLTQLITSIPWLEKLIAFVIGVCAFIDILAFR PEE >gi|312957022|gb|AENW01000007.1| GENE 178 182775 - 183806 663 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 5 337 518 858 860 259 43 4e-77 MKQTLILAVESSCDETAVAVVADGKEILSNVVATQIDVHKEFGGVIPEVASRIHVENISM VIEEALHKANVAMEDIDAVAVTQGPGLVGCLHIGVQAAKTLAWAFHKPLVPVHHIAGHIY ANRLITDLKFPLLALVVSGGHTELVYMKDEWSFEILGTTQDDAIGEAGDKVGRVLGLPYP GGVYVDRIAKEGKPMYKLARPKTENPMDFSFSGLKSSVLQFIDRCKRKNETFAAADLAAS YQETAFGALLERAEYALQKYHPAQMVLAGGVAANSCLREKVEKGLADKYKDIEFIIPPLS CCTDNAAMIAVAGYIAYTHGVRGDFDLTADPGIELEEAAQSPA >gi|312957022|gb|AENW01000007.1| GENE 179 183803 - 184252 259 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|114567382|ref|YP_754536.1| ribosomal protein (S18)-alanine acetyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] # 1 144 7 149 150 104 35 3e-21 MIRKAADRDLERIMQIEEICFSSRWTKEMFLYELHENEFGHFYVLEENQKIAGFIDFWIT FECCQLANIAVHPSFQRRGYSRCLMDFMIASAEQEQCETIMLEVRPSNEAARCLYDSYEF MKVNIRKGYYNDNGEDAIVMCKALGGNLV >gi|312957022|gb|AENW01000007.1| GENE 180 184249 - 184854 600 201 aa, chain - ## HITS:1 COG:SA1856 KEGG:ns NR:ns ## COG: SA1856 COG1214 # Protein_GI_number: 15927626 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Staphylococcus aureus N315 # 1 198 10 220 229 89 29.0 3e-18 MKTLCLDSAHKYLVIGLYENDRMICGTANLSWKRQSETIFPELMRLMKEAGWDSDDVDEV VITDGPGSYTGVRIAMCVAKVLCTRKHIPLYAVSTLQLYAGVHERTFVMLDARSQRAYTG ALQGGKFVEEEQILTLDEIRLLLNQADYQLFGDCELIDLKAKEPKFLENFIALRPFYRKI ENVHTLTPRYLKESDAYKVKP >gi|312957022|gb|AENW01000007.1| GENE 181 184854 - 185306 597 150 aa, chain - ## HITS:1 COG:BS_ydiB KEGG:ns NR:ns ## COG: BS_ydiB COG0802 # Protein_GI_number: 16077658 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Bacillus subtilis # 10 150 12 150 158 146 52.0 2e-35 MKQIPVCSLEETGELGLKLASLIKPGMLITLSGDLGAGKTTFTKYLGKGLGVKKTINSPT FTILKIYQGTSMPVYHIDAYRLEGITQDLGFEEYFEDDGVCVIEWPHFIESQLPGERLHI DITRVEGEDEKRMFTFDPKGEVYEKIVEAL >gi|312957022|gb|AENW01000007.1| GENE 182 185319 - 186539 1019 406 aa, chain - ## HITS:1 COG:SP0615 KEGG:ns NR:ns ## COG: SP0615 COG2348 # Protein_GI_number: 15900523 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 3 406 2 403 406 272 36.0 7e-73 MQYQFIEQVDAKEHDAFVSKHKLCNLLQSSSWGLVKENWKHTIVGVKYQNQLVASCMILI KPLPLGFSMFYIPRGPVLDFSNTALVAFLMKELKRYARKYRCLFITFDPAVHCNDYIIKE ANDNHYEHIDAMIQMLQDQGAVFKGFTKHIDDTIQPRYHANVYACDDFNATLSKGCRKAL QTVQKKMIEVLPYHMDGVEDFARVMHCTEERKNIHLRDQEYFQRLMEIYGEDAVIFLAKL PLRKLYEDTKQRYEQNERDLAKCPENAKKKRFTLEELHASLSREVKELQENLERDGDIAV VSGALCVKFGPTAEILYAGMDERYKRYMAPYASFYSCMTWSFEKGCHWSNMGGIEGSLKG GLTKFKANYNPTINEFIGEFDLPVYKSLYALSQWAMKQRKKALQKK >gi|312957022|gb|AENW01000007.1| GENE 183 186555 - 187802 1260 415 aa, chain - ## HITS:1 COG:SA1206 KEGG:ns NR:ns ## COG: SA1206 COG2348 # Protein_GI_number: 15926954 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Staphylococcus aureus N315 # 1 413 1 413 420 268 37.0 2e-71 MEFTTLTPQEYEAFRNQHPYRDFMNSLKAMDLKKINHWDVEYVGVKEQDKVICATPLTSI PVMKLYRFYYAQRGFLMDYHNVELLRFFTKELAAYLKKKKGLYLVVDPNVLYKERDIDGE LVENGFDHSYVVDNMIASGYEHQGFTKDFQVISEIRWMFALYLDGKDENTLLKEMHQQTR WSVNKTLKQGIQVRELSIDELDIFLDMMHHTSQRCEFAEREPEFYRNQMIAYGEDAKLLL AYLDLNDFRRKLDLEKQDLEKEHAEILAKLEELPNSKKFIKKKKVLDEALALNEKKYKDA DTLEQEHGACIPMATSFFIQSQDELVYLYSAAYDTFKKYNAPYAIQWHMLQYALKHGIRK YNFYGLSGDFDKNAQDYGVYEFKKGFHGVVEELVGDFILPIQKGPYALYKKLKNK Prediction of potential genes in microbial genomes Time: Sat May 14 01:41:13 2011 Seq name: gi|312956945|gb|AENW01000008.1| Clostridium sp. HGF2 contig00001, whole genome shotgun sequence Length of sequence - 78699 bp Number of predicted genes - 68, with homology - 61 Number of transcription units - 29, operones - 14 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 702 - 4964 3022 ## COG1201 Lhr-like helicases - Prom 5014 - 5073 5.2 - Term 5067 - 5111 1.3 2 2 Tu 1 . - CDS 5122 - 5745 470 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 5781 - 5840 6.1 3 3 Op 1 8/0.000 + CDS 6517 - 7839 692 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 4 3 Op 2 . + CDS 7843 - 8400 589 ## COG1475 Predicted transcriptional regulators + Prom 8428 - 8487 2.9 5 4 Tu 1 . + CDS 8510 - 8809 156 ## - Term 8735 - 8784 4.0 6 5 Tu 1 . - CDS 8913 - 9122 127 ## - Prom 9236 - 9295 4.2 - TRNA 9396 - 9484 72.2 # Ser CGA 0 0 - Term 9576 - 9637 4.1 7 6 Op 1 58/0.000 - CDS 9640 - 13500 4842 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 8 6 Op 2 3/0.000 - CDS 13505 - 17716 4473 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit - Prom 17756 - 17815 4.3 9 6 Op 3 3/0.000 - CDS 17817 - 18428 472 ## COG2813 16S RNA G1207 methylase RsmC 10 6 Op 4 47/0.000 - CDS 18500 - 18871 459 ## PROTEIN SUPPORTED gi|167757654|ref|ZP_02429781.1| hypothetical protein CLORAM_03204 11 6 Op 5 43/0.000 - CDS 18893 - 19414 521 ## PROTEIN SUPPORTED gi|237735200|ref|ZP_04565681.1| 50S ribosomal protein L10 - Prom 19438 - 19497 7.2 - Term 19461 - 19501 2.5 12 7 Op 1 55/0.000 - CDS 19618 - 20304 835 ## PROTEIN SUPPORTED gi|239825681|ref|YP_002948305.1| ribosomal protein L1 13 7 Op 2 . - CDS 20322 - 20738 473 ## PROTEIN SUPPORTED gi|167757651|ref|ZP_02429778.1| hypothetical protein CLORAM_03201 - Prom 20834 - 20893 5.0 + Prom 21232 - 21291 7.8 14 8 Tu 1 . + CDS 21539 - 22507 890 ## COG1073 Hydrolases of the alpha/beta superfamily - Term 22533 - 22590 6.6 15 9 Op 1 1/0.000 - CDS 22603 - 23424 734 ## COG0789 Predicted transcriptional regulators 16 9 Op 2 . - CDS 23494 - 24225 838 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Prom 24268 - 24327 7.4 17 10 Tu 1 . + CDS 24363 - 25436 1084 ## COG1396 Predicted transcriptional regulators + Term 25464 - 25516 8.4 18 11 Tu 1 . - CDS 25547 - 26596 998 ## BBR47_51510 hypothetical protein - Prom 26679 - 26738 6.8 19 12 Tu 1 . - CDS 26802 - 28469 1850 ## smi_1541 hypothetical protein - Prom 28493 - 28552 2.8 20 13 Op 1 . - CDS 28770 - 30104 1064 ## 21 13 Op 2 . - CDS 30101 - 30964 1004 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 30986 - 31045 5.9 22 14 Op 1 . - CDS 31099 - 32274 777 ## 23 14 Op 2 . - CDS 32267 - 33001 741 ## 24 14 Op 3 . - CDS 32998 - 33525 536 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 33551 - 33610 5.3 - Term 33984 - 34035 1.6 25 15 Op 1 . - CDS 34174 - 34776 621 ## LSEI_0329 kinase - Term 34822 - 34853 1.7 26 15 Op 2 . - CDS 34859 - 35695 971 ## COG0191 Fructose/tagatose bisphosphate aldolase 27 15 Op 3 . - CDS 35735 - 36115 560 ## Thit_0264 hypothetical protein 28 15 Op 4 11/0.000 - CDS 36126 - 37409 1630 ## COG3037 Uncharacterized protein conserved in bacteria 29 15 Op 5 13/0.000 - CDS 37441 - 37728 323 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 30 15 Op 6 5/0.000 - CDS 37766 - 38206 605 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 31 15 Op 7 . - CDS 38211 - 40184 1960 ## COG3711 Transcriptional antiterminator - Prom 40336 - 40395 7.5 - Term 40912 - 40956 -0.7 32 16 Tu 1 . - CDS 40999 - 42159 1353 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 42179 - 42238 4.1 - Term 42200 - 42249 -0.7 33 17 Tu 1 . - CDS 42332 - 42802 509 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 42829 - 42888 6.0 34 18 Op 1 . - CDS 42961 - 44004 1069 ## MCP_0128 hypothetical protein 35 18 Op 2 . - CDS 44001 - 44810 694 ## COG0789 Predicted transcriptional regulators - Prom 44863 - 44922 4.1 - Term 44892 - 44939 -0.6 36 19 Op 1 . - CDS 44941 - 46911 1586 ## COG3711 Transcriptional antiterminator - Term 46922 - 46950 2.3 37 19 Op 2 1/0.000 - CDS 46954 - 47769 738 ## COG0191 Fructose/tagatose bisphosphate aldolase 38 19 Op 3 7/0.000 - CDS 47785 - 48834 1080 ## COG1299 Phosphotransferase system, fructose-specific IIC component 39 19 Op 4 8/0.000 - CDS 48845 - 49159 316 ## COG1445 Phosphotransferase system fructose-specific component IIB 40 19 Op 5 . - CDS 49175 - 49636 553 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 49671 - 49730 5.7 - Term 49761 - 49804 6.0 41 20 Tu 1 . - CDS 49872 - 51074 1253 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 51107 - 51166 6.3 - Term 51179 - 51215 5.1 42 21 Tu 1 . - CDS 51225 - 52847 1855 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 52868 - 52927 7.5 - Term 53008 - 53051 5.2 43 22 Op 1 2/0.000 - CDS 53056 - 54465 1278 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 44 22 Op 2 13/0.000 - CDS 54462 - 54800 316 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 45 22 Op 3 10/0.000 - CDS 54806 - 56062 793 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 46 22 Op 4 . - CDS 56079 - 56384 300 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 56526 - 56585 4.7 + Prom 56457 - 56516 11.1 47 23 Tu 1 . + CDS 56550 - 58463 529 ## COG3711 Transcriptional antiterminator + Term 58499 - 58533 3.4 48 24 Tu 1 . - CDS 58942 - 59604 314 ## CLL_A2076 hypothetical protein 49 25 Op 1 . - CDS 60098 - 60424 130 ## CLH_3192 hypothetical protein 50 25 Op 2 . - CDS 60409 - 60645 185 ## Lebu_1380 protein of unknown function DUF1703 - Prom 60670 - 60729 7.9 51 26 Tu 1 . - CDS 60831 - 61874 761 ## COG3177 Uncharacterized conserved protein - Prom 62005 - 62064 5.4 - Term 62139 - 62185 4.1 52 27 Op 1 . - CDS 62190 - 64088 1753 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 53 27 Op 2 . - CDS 64085 - 64666 724 ## COG0194 Guanylate kinase - Prom 64705 - 64764 3.4 54 28 Op 1 44/0.000 - CDS 64792 - 65766 955 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 55 28 Op 2 44/0.000 - CDS 65763 - 66776 432 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 56 28 Op 3 49/0.000 - CDS 66789 - 67727 1364 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 57 28 Op 4 . - CDS 67740 - 68657 1282 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 58 28 Op 5 2/0.000 - CDS 68721 - 69368 913 ## COG0517 FOG: CBS domain 59 28 Op 6 18/0.000 - CDS 69373 - 70077 296 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 60 28 Op 7 19/0.000 - CDS 70079 - 70855 251 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 61 28 Op 8 24/0.000 - CDS 70857 - 71816 1415 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 62 28 Op 9 20/0.000 - CDS 71821 - 72699 1283 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components - Term 72712 - 72749 6.1 63 28 Op 10 . - CDS 72772 - 73965 1665 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 74017 - 74076 6.3 - Term 74162 - 74200 5.2 64 29 Op 1 . - CDS 74225 - 75034 714 ## 65 29 Op 2 . - CDS 75049 - 76458 1302 ## DSY4473 hypothetical protein 66 29 Op 3 . - CDS 76442 - 77419 901 ## COG1131 ABC-type multidrug transport system, ATPase component 67 29 Op 4 . - CDS 77429 - 77959 587 ## COG0681 Signal peptidase I 68 29 Op 5 . - CDS 77979 - 78626 778 ## Predicted protein(s) >gi|312956945|gb|AENW01000008.1| GENE 1 702 - 4964 3022 1420 aa, chain - ## HITS:1 COG:ECs2362 KEGG:ns NR:ns ## COG: ECs2362 COG1201 # Protein_GI_number: 15831616 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Escherichia coli O157:H7 # 11 1382 14 1499 1538 550 29.0 1e-156 MGKKKDSYMHVFTQPTKDWISHTFAAPTAVQQEAWPVIAEGGSVLISAPTGTGKTLSAFL VFIDKLQALAHQGKLKNQLYLIYVSPLKSLAQDIRENLNKPLSGIAQEQNGQGAANITIG IRTGDTPQRDRQRMIKHPPHILIITPESLFLMLTGTGGQTILHTAEALIIDELHALIDTK RGAHLMLSIARLEKLCKRKLQRIGLSATIEPLQTAADYLSLDTVSMIAPSMQKQIHIEVN GLTPALGRRKDPVWEELAESVYAKCLESRSVIAFSEGRRYAEKLAYYVNQLGGEDFARVH HGSMSKEQRLEVEASLRNGTLRLLCATSSMELGIDVGSIDQVLQIGCPRSISSTMQRLGR AGHNPGQTSYMFMYPRTSQETLFCGMSAAVAKAGGIEQASPPKKCLDVLAQHLVSMAAIA SSSHTELERKWHLTGIAYTIDDVMELLQSTYTFQDVSKQEVTAILCMLAGDFEHKREVPV RPRILYDRLHGCVLAEAYSRMLAVAAGGTIPDKGLYAAKTEDGVKVGELDEEFVYETRLG DRFMLGANAWQVVGMDRDSVVVTPTYPQGARLPFWKGEIKGRSLKTSLAFGAIMRKLSEA YRQNTLQQELQTLGLDAAAVENTSEFLKRQIKATKILPDDQTILIEHFRDSSGSPQAMLH TMFGRRINAPLALLLQDAAQRVTRTHIGSVDEEDGILLYSYGEGKIEEGLLYNINPEAAS KILEIMLPLTPVFSMNFRYNAARALMMGMRRNKRQPLWMQRLRSTEMLEALLQEEHHPLI VETKRECMEDQWDLKGLLEILYAIRSGDIHVHELQLDTPSPLSLPLQWRVEAAEMYEYTP TTPGIQQAVYEELQQMEQIKPSLEALKHMGKRKKTIQSANELHTLLMMEGDMTAQEIKAA CTDEMDVKHAEGRIADWLHELTSQELITYIEPGLWIAAEQREEYEQALLEHKSEAGMHII RRMLYYRQAQTLKQLQERYLAQEEAVQFWLQQLCSEKEVIEDGGCYYHSKQYERARKQTI RNLRIQAVTQPSHHYAALLVSRVFHNAPVKDQLKDTLDLFCNQKHAASLWETVLLPSRIS GYQPELLDQELAQGEYFWKLHPDGMLSFHRYEDIDWEQSTAAVNDGSREMQTEDTQEQRI YQRLKIQGASFLHALNRIPQAGDVHANLLRLAEQGLVCADSFTPVRQWLNRKKMKKASAK QQLHARAYAMSSGRWDILRPLKSIPEEALIQACFQEYGIVCRETFRIFLQQQEQEQNFSW RDALHLLSIWEFTGRVRRGYFVKGMSGAQFIRKQEYEGSMHILAHPKQQICWLNAQDPMQ PWGKLLEHKDSAAFMNIAGTAVALAGGTAIMVFERQGTVLKIFDISLAEEALHAFVQTYR EQRIYPDKKRLLVKEYPKAAAALLERAGFYKDMLDYMLYR >gi|312956945|gb|AENW01000008.1| GENE 2 5122 - 5745 470 207 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 8 202 4 197 201 185 44 6e-46 MNEHYPFVLPPLPYRYYALEPYLEEQTIRIHHDTLFQGYVDRLNAALQKYPRFQRWNLER LIVDNDRLPVEIRTTVYNNAGGVYNHDAYFAAMTPKYRRPSNYMRNVLEESFGSFENFKE QMLNAGLRVFGSGWAWLVQDRGTKLRIVTTKNQDTPLPQGLVPLLPLDVWEHSYFLQYYS ERAAYIKNWFALIDWSYVEKRYLNEHS >gi|312956945|gb|AENW01000008.1| GENE 3 6517 - 7839 692 440 aa, chain + ## HITS:1 COG:SPy0189 KEGG:ns NR:ns ## COG: SPy0189 COG3969 # Protein_GI_number: 15674394 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Streptococcus pyogenes M1 GAS # 3 436 2 435 444 692 75.0 0 MKKRYLQQNVYQALLERLHFIFHEFDVVYVSFSGGKDSGLLLNILLDFRDKFYPSTSIGV FHQDFEAQYRATTEYVEETFRMLEKRPGVELYWLCLPMATRTALSSFEMYWYPWDDKKET LWVRPMPEYDYVINLKNNPVATYHYKMHQEDLAKQFGRWYRSVHDNKKTVCLLGLRADES MQRYSGFVNKKHSYKGKCWITQQFKEVWTGSPLYDWSVEDIWHAYYKFGYSYNSLYDLYY KAGLTISQMRVASPFQDYAKESLNLYRVIDPQMWVKLLGRVQGANFAAIYAKTKAVGYRT IKLPEGHTWKSYTMFLLATLPKRLRQNYIEKFNKSITFWHTVGGGLEEETIEELKEHGYH IKRNGVSNYTIFKNSRIIFLDRIPDDTDDIKSTKDIPSWKRMCFCILKNDHICRSMGFGL TREQQRRLDHLKEKYKGTEV >gi|312956945|gb|AENW01000008.1| GENE 4 7843 - 8400 589 185 aa, chain + ## HITS:1 COG:SPy0190 KEGG:ns NR:ns ## COG: SPy0190 COG1475 # Protein_GI_number: 15674395 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 4 170 6 172 176 273 81.0 1e-73 MSKSPVYHIRAVPIEKIIPNDYNPNAVAPPEMKLLYDSIKADGYTMPIVCYYDEASDHYI IVDGFHRYRIMKEYPDIYEREKGVLPVSVINKPLDQRMASTIRHNRARGSHDVDLMSNIV KELHELGRSDAWIAKHLGMDRDEILRLKQITGLAALFKEVDFSQSWEPVEDEEQLQSIED QFVDA >gi|312956945|gb|AENW01000008.1| GENE 5 8510 - 8809 156 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTENVGFWSFNIRMIQKKEFWKKYDAFYNTMEHELTKLQNDPKNTDYETLFAYAPTNCL ILRFLSQKIIKAVNLGTIKDDQTRFNPFIRSPFFNNLCQ >gi|312956945|gb|AENW01000008.1| GENE 6 8913 - 9122 127 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNMSKNIRNVIIWYIIFIFATWFFLSLTLLNAFDFLIWYISIISLALLIAISIIVCELF KALQTMNEK >gi|312956945|gb|AENW01000008.1| GENE 7 9640 - 13500 4842 1286 aa, chain - ## HITS:1 COG:BH0127 KEGG:ns NR:ns ## COG: BH0127 COG0086 # Protein_GI_number: 15612690 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Bacillus halodurans # 1 1226 2 1184 1206 1511 61.0 0 MSVNNFASIQVSLASPDRIHEWSHGEVKKPETINYRSQKPERDGLFCERIFGPSKDWECY CGKYKKVRYKGVVCDRCGVEITKSSVRRERMGHIELAAPVAHIWYLRGIPSRMALLLDVT PKQLEEVVYFVSWIVTDPKDTKLEYKQVLSEREYRENMAIYGPGSFTAQTGAEAALTLLT EVDLEAEFKHIQDALESAQGEKRKKLIKRLDTVEAFRNSDNKPEWMVMTVIPVIPPDLRP MLQLDGGRFATSDLNDLYRRVITRNNRLKKLLELGTPAIIVQNEKRMLQEAVDALIDNGR RSKPITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLKMYQCGLPRE MAIQLFKPFVINEIVNKEIASNPKTAEKLIDRQDPRIWDIVESVIDGYPVLMNRAPTLHR LGIQAFKPKLVEGRAMRLHPLVCTAFNADFDGDQMAVHVPLSEEARAEALVMMLGSNNIL GPKDGKPIVTPGQDMVMGNFYLTMEETAEEFYQEADRYNAVDCPKSAAIWTRYGDNEGHV FGSINEILMAYQTQQIHLHSRIAIPARALKKESFTEEQNKKYLLTTVGKVIFNNMFPTDF PFLNEVSAENFVATPERFFLEMGKDVKEAIKSMPVTAAFKKKDLGKIIGEIFKRYSTEKT SEILDQIKDMGFQYSTVAGVTVSLSDIEVAPHKEEHVEYGKQKAEELKTLRKKGKLTMME WERHLNKLWADVKDDIAEELLGNLPRKNPISMMARSGARGNTSNFTQLAGMRGLMAKPNQ SKSAKGEYVPTIIEVPIYSCFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLVD VAQDVIVKQEDCGTDKGYWVEAIVDRKTNTIIESLFDRLVGRYSKQEITDPKTGEVILES DEFITDALAQKVVDAGVEGMYIRSAFTCKSIYGVCKKCYGRNMATGKDVEVGEAVGIMAA QSIGEPGTQLTMRTFHTGGVASADGGDITQGLPRVEELFEARCPKGVAVLAQITGEITDV HQIDTGYEVTVSNDKESIVHKVTLIQAIRPWMKVGAHVEAGDKITEGQVDPKELLKVAGV RQVQNYILKEVKKVYQSQGIEISDKHVEVMIRQMLRKVVVLEGNDTHLNPGVQISLTEIT KINRKALLSGQVPATFKPVLLGISKASVETDSFLSAASFQETTKVLTDAAIKGKKDYLIG LKENVIIGKLIPAGTGVGDERPMNLIIGEKAKELKEIREERNHKEDDDNFMAYVPAGPER LTTEMVQQIMDGEDTTLEQPAVEVQE >gi|312956945|gb|AENW01000008.1| GENE 8 13505 - 17716 4473 1403 aa, chain - ## HITS:1 COG:BS_rpoB KEGG:ns NR:ns ## COG: BS_rpoB COG0085 # Protein_GI_number: 16077175 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Bacillus subtilis # 522 1372 334 1188 1193 1080 63.0 0 MDKKQPYRIVASGKKAERRDYSKVSGHLELPNLVEIQTDSFEWFKNEGIGEVFNEIYPIQ NYGGNIKLKFAGYEFGEPKFNAEESMYRECNFAAPLKARMELEITDNTTGEVINKWEDVF LGDFPLMTETGTFIINGAERVIVSQIVRSPGAYFSTGYEEKTGKESFACELIPSRGTWLE FLTEVKKASTGRVLNMSIDRKRKMLSSILFKAIGMSVDLDRSEDAHDTMQIKTFLKAMGR DIVENVAIDDEDREFMNLYLTLYASFFGKYEEIENTLMADKVKTTQEALLSIYENQRSDE IPTLDGSITLMNAKFFDPRRYDLTKAGRYKLRKKLNAINRVDKHHLAQDILDADGSVFMP SGTMVNRDERNALRKELEKGMHVNAFPFNPLFNHPDKVYVPSSNHLGLVGRVLAGDVELE DGTLYEGSILSEQDVEAIVKGVEKVAVHGGIIAKKVALTSANVNAVLNYGQRMYAFARLT DANGEDVVNEEGDFFVDGYTPRHKPEALSVTAVDEIKAKVNNGAVLYAWLVGAAIQEILI RDHDGAVVKVMGNDPYADKHTITISDMYAFYAYNLNNMEGVGDTDDIDMLGNRRIRSVGE LIQNQFRIGLSRMERVVKERMSIADIATLTPKKLTNIRPLTAAIKEFFSSSQLSQFMDQQ NPLAELTNKRRISALGPGGITRDRASYEVRDVHSSHYGRICPIETPEGPNIGLISNLTTY GKINEYGFIQTPYRIVNADGTVQEEALYLSADEEADYVIAQANEVVEGRLINEHVVARKA GDTIIARREEVELTDVSPKQIVSVATACVPFLENDDASRALMGANMQRQAVPLLQPHSPY VGTGVEFKIAKDSGVGIVARENGVVEYVDSQRIIVSENDGNRREYRLRKFQRSNNGTNIN QSPIISKGERIEKGDILADGPSMERGELALGQNVTIAYMTWYGYNYEDAIIMSERLVRDD VYTSIHIEEYDIDCRETKLGPEEITRDIPNVSENACRNLDSRGIIMVGAEVMEGDILVGK VTPKGQSEISPEEKLLLAIFGEKSREVRDNSLKVPHGGAGIVHSIRVFKRSEGHDLPPGV NETVKVYIVQKRKISEGDKMAGRHGNKGVISKILPVEDMPYMPDGTPVDIMLNPFGVPSR MNIGQVLEIHLGYAAKKLGVKFSTPVFDGINNTELSDIMKEAEMTVDGKQVLYDGRTGEP FDERISVGVMYMIKLAHMVDDKLHARATGPYSLVTQQPLGGKAQNGGQRFGEMEVWALEA YGAAHTLQEILTVKSDDIVGRTKTYEAIIKGKDIPEPGIPESFRVLKHELQALAIDVKML DEDGNEVDISKEDNSEAAATLPPIPAAEPVGEEDINDLEVEEEDAVADDESEDEILLDDD AEADDFIEDEDIELSDDENEEEA >gi|312956945|gb|AENW01000008.1| GENE 9 17817 - 18428 472 203 aa, chain - ## HITS:1 COG:lin0284 KEGG:ns NR:ns ## COG: lin0284 COG2813 # Protein_GI_number: 16799361 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Listeria innocua # 2 199 4 200 201 199 49.0 4e-51 MDHYFTDNRHLAENRKEISFRFWCFNVSFITDNGVFSKDSVDFGTRVLLNTLHEHEEELG NQLLDMGCGYGVVGIVTKKAWPDKQVEMVDVNPRAVELARDNAEKNNIEANIHVSDVYEQ VSGNTFTDIITNPPIRAGKNVIYNIFEEAWNHLADQGTLWVVIRKQQGARSAVTKIKEVF GNCDIIHKEKGYFILKAKKALTI >gi|312956945|gb|AENW01000008.1| GENE 10 18500 - 18871 459 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167757654|ref|ZP_02429781.1| hypothetical protein CLORAM_03204 [Clostridium ramosum DSM 1402] # 1 123 1 123 123 181 80 1e-44 MAKLAQEDILAYLEEATILELNELVKAIEEKFGVTAAAPVAVAAVADDAAAAGPSEVTVT LTDIGGTKVAVIKAVREITGLGLVDAKGLVDKAPSVIKENIKPEEAEEIKKKLMDAGASV EIK >gi|312956945|gb|AENW01000008.1| GENE 11 18893 - 19414 521 173 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237735200|ref|ZP_04565681.1| 50S ribosomal protein L10 [Mollicutes bacterium D7] # 1 173 1 176 198 205 64 7e-52 MNQAIIDSKKAVVSEIAQKMKESQSTVVVEYRGLSVAEVTELRRNLREEGVEFKVYKNSL AQRAAVEAGADDLTKDLIGPNAIAFGGDAVAPARVLAKFAKKHEHLVLKSGIVEGKVVGV DTIKELSSLPNREGMLSMLLSCLQSPVRGFACAVKAVADAKDGGSAEEAAPQE >gi|312956945|gb|AENW01000008.1| GENE 12 19618 - 20304 835 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239825681|ref|YP_002948305.1| ribosomal protein L1 [Geobacillus sp. WCH70] # 1 224 1 224 233 326 69 3e-88 MAKFGKKYVEAAKKVDRTKTYSVAEAVKLAKETNIAKFDASVEVSFKLNVDPRHADQQIR GAMVLPHGTGKTQKVCVITQGPKEQEAKDAGADFVGGKELLEDIQKGWFDFDVIVATPNM MGELGKLGRLLGPKGLMPNPKTGTVTMDVAKAVEDIKKGKVEYRVDKEGNINLMIGKVSF DDEKLVDNFNALLKVISKARPAAVKGTYIKNLVISTTMGPGVKVTVEK >gi|312956945|gb|AENW01000008.1| GENE 13 20322 - 20738 473 138 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167757651|ref|ZP_02429778.1| hypothetical protein CLORAM_03201 [Clostridium ramosum DSM 1402] # 1 135 1 136 137 186 66 3e-46 MSKKVAKVCKLQFPAGGARPGPALASAGINMPQFCTAFNDATKERAGDVVPVIITAYEDK SFDFVIKTTPAAMMIKKAAGIKKASGNQKEISGKITVDQLREIAEYKMPDLNANDVEAAM RIVAGTAKNMGVEVEGFE >gi|312956945|gb|AENW01000008.1| GENE 14 21539 - 22507 890 322 aa, chain + ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 70 321 67 319 320 196 37.0 4e-50 MSKKSKIITGLGAASTLAAATDFFLCRTLFDQTLNRKKLKKGKQLSLADADLNDEQKTRR HKELLLCKKWIQNVAVDKVSVESEDGLQLVGMIYPSHDHTSHRWAFVLHDYACTKEDMRT VARAFHEQGYHVLTPDARAHGESEGSLISLGWNERKDLLRWIDAVLEMDSQAEIVLYGIS MGADTILFCPQEKLPAAVRCIIEDGGYTSVYDILSWQMTHYYKMPPFPILDSMGVLVKQK MNFGIRKASALPKMEKAVLPTLFLHGEKDVHVPCDMAFRLYDACQSAKDLYIVENSGHRA NMYEQPKAYYQKIFHFLDEHMK >gi|312956945|gb|AENW01000008.1| GENE 15 22603 - 23424 734 273 aa, chain - ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 1 115 21 135 135 75 33.0 1e-13 MLRIGDFSKLSRISIRMLRYYEKHNLLKPRYVDEESGYRFYAHEQIFEAAKIRFLREAGF SVAMMEEIMAQYDSPQEIQRYFQIRMKELEEERQRISNTLIRLERAQKLLDTEDTFMKYT VEVKQIKGMYAATLRSMIPTYEREDLVWKRMYSILAEKHLDITFAQPQNARAYFFDEGFA EKNVDIEIATEVVGSYEDVEDICFRQLKDEMVASVTFTGDYSQITEVCMAITMWIKENGY ELDGANFCIYHKGWGQCDNPKEFVTEICFPIRK >gi|312956945|gb|AENW01000008.1| GENE 16 23494 - 24225 838 243 aa, chain - ## HITS:1 COG:CAC2787 KEGG:ns NR:ns ## COG: CAC2787 COG0639 # Protein_GI_number: 15896042 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Clostridium acetobutylicum # 1 225 1 202 221 85 27.0 1e-16 MSTYVMSDVHGLKDRYDAMLEALALQNEDTLFVLGDVIDRGRDGIAILLDIMNRDNVYML LRNHEYMMKQYYEAVHHVITDMQEAWVVTDRWQRNHCSPTIDAFERLNERKQRELLDYLD ELPIAICDLKVHEELFYLTHGSAQPQFTHGIVTQQDVKDSDVTMERFVWDRMDVHERLFD DRSVIVGHTPTLFFQEAHPYAIWTDTGDVKTARIMDIDCGCAANDIHSRLGVVCLDTRTV QYF >gi|312956945|gb|AENW01000008.1| GENE 17 24363 - 25436 1084 357 aa, chain + ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 116 1 116 125 67 32.0 5e-11 MDIGKNIVRLRNEKGYTQEMLASLLHVSSAAVSKWEHGSSCPDISTLPILARIFDISIDE LLNFEKNLSEEQVNRLCEEMLGQFQSAPFPEAMAYVKKVLRQYPNSESLKLSFARLSMQV LLLLQEEGQANEFLALAKQLAQEVSQSADLEKKQLAGILLVNFLAMEQRYEEGLQLLQKL PRLADTSSLEGTLAMQIKDEDEAMHMLQAQLFSHYHQIGMILLNMCNLAKRNNRMDMLRS YLQLMEGLSHLFQLPLSVMSQLYIYSAALHDEAATLRYVKEYIEQLKSMDNLQKQRQMQL HDIPWFDHVELNAQGLSKGIMQTHIKDMLEDMAQSSILSFDSVQQLLKEEIALLRKE >gi|312956945|gb|AENW01000008.1| GENE 18 25547 - 26596 998 349 aa, chain - ## HITS:1 COG:no KEGG:BBR47_51510 NR:ns ## KEGG: BBR47_51510 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 14 341 10 344 364 138 26.0 3e-31 MEQIKETSLKFSESPLCPIAADVISDGESIYFYMYDLDFENERLIARSACWVKNLVEAPL TFQKDKIEEDHQPVLPSMFVDEDMDIKPWNEAELEIVWSKEGHIAGLLHNDEIVCVIPSW ADGHNFPGYALYAKENNMVAWKLKDASPMVERILEGKAFWKQEFNEVWKTYNTPYFSQLS DLFGAATNCYDLNKDRFPSRLLLTFEKDGMSYAFTIGAGMFSMPNADRYYAEYEDYARCE YAVQYPSSLLSREEEMELFSSIAGLCSLPWHAIDCVGHGHTLDIPIKDKYGCVLIDDEKS GDPLPLHLKKEGVHVYWIRSVEDEVFAQLKDEEKKEQLLEQLCLHTELL >gi|312956945|gb|AENW01000008.1| GENE 19 26802 - 28469 1850 555 aa, chain - ## HITS:1 COG:no KEGG:smi_1541 NR:ns ## KEGG: smi_1541 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 535 1 512 531 347 38.0 6e-94 MKKYIYFLIPVYALYIFGMFYVMLPPLNWHAPAFWKFLALSAGPLLVLLIVFSFTKRQID SFQNWRSSFHNKNAVNLTSEQKRWGTICKASILALMFVVVFPSAATLVTSRIFHAKAFSQ RIEPKDVEFSEVPQVDFKKTPIIDRDSSIRLGDKVMGNMTEWVSQFDVSNEYTQISYKDS VYRVTPLTYNGFIKYFKNKSGGVPAYITVDSTSGKTKLVKLKDLGMDGMKYVPSAYFNEN LSRHLRFQYPTEIFGEPSFEIDEEGRPWYICTTYTYSGVGNKKRVTGAVFLDPITGKSEK YDTKHIPSWADRIYPESLVVEELDDNGSLKKGFWNSQFGQTGVIVTSEGYNYLEKNGDIW LYSGLTSANADESNLGFVLVNLRTHEAMKIATAGANEKSAMKSAQSEVKNYGYQSTFPLL INIKGNPVYLMSLKDNGLIKMYATVSAVDYQKVATVYTDEGLDALFKKTLNLLGSGSEDS ISKESLKTEDITVAGVEKINMDGNTIYYIQSEKGDIYKISFTTKYENQLVFLKSGDKLSI SYIDAEGIKTIKELK >gi|312956945|gb|AENW01000008.1| GENE 20 28770 - 30104 1064 444 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLYLLECKKIMTSRFHLILLLLFMMLPMVIFQNRITDTGENTNPYRHADGSRMSKEEIQ EEVHHEKLKWTGTMDAAWWNRLKVAKKAADKRIDTHFFNMEKMNALYGKDWYEDYQSNKR DYAYADDTKEAKKGKRILYLREEFLPNYKEDIADEVVSMLYLNYGKTMLADKPWNSEDGT FGTMYSSFNNEKVAAPVYSLDVSRAELQLLKDYMNEKESFHYGDSREWFSLLETYSTVGI VLMVWVLVISSNVVNRERKQNMLEVLSSCSRGGSALFLSKLAAVITCALIGLLLMILPVT LYAWLSGNLGDMAVNITEGLHMISVFTYQEGFFISMEVLVLGAVVCAILGTLASTCLKSS YVSLGLCMLCMLAGTALSSYASWMKLFPFKFMELTCVAVRGFTCNLFDQAFFLWKLLPLV WIPCSFLLCYATLRIYRSRSYHRI >gi|312956945|gb|AENW01000008.1| GENE 21 30101 - 30964 1004 287 aa, chain - ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 5 279 4 282 294 195 37.0 7e-50 MNVKLEQLSKHFGSVIAVQHMNAVLKPGITGLLGANGSGKTTLLRMMVNVLPPDEGHILY GDIDIREKREEYLANIGYMPQHLGMYPTFRVEEFLQYMGAVKGLTKSYTTQRIQELLPAV HLEPQRKKKIRTLSGGMRQRLGIAQALLNDPAVLILDEPTAGLDPKERNQFSQLLSEMSK DKIILLSTHIVSDVEAIADQIMIMKKGCLIAHDTPQKLLSMLDGRVKERQVSQKELEQLR GHAVICYQRVSTQGTLVRYLDETGRDACSVEPTLNDLYLYHFQEEEA >gi|312956945|gb|AENW01000008.1| GENE 22 31099 - 32274 777 391 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCRLCLRELHKFFHSRLHCALLCVLLLFPLLHLAFTLHAQTQERYALLNDKVLNAKEAKA IADDLRRSMSGTVQKSWIADRKQELEKLVEQGIQKEDIRYQTLDQAYWDGYRTMEMVDAI RLDPQTPAIVRHDLNTHQWRYGPYEGWMSRMKIFEDTAKLYALFCLFLFGSMFNQEESCD MLELLKSCRKGRRKLACAKLIVSFSLALMLAAALYIILSVSTSMILDLSGGDTTLMMLRT LHIYTFSQIDLQALGLLLLSGIACTLFAVFTSVIVKKPAVSLGLGMLFFLLPMLIAMDGL QTSWTSFFPSNFLSFRAIDQLMTTPWLAVLGNLYHRLPLLSVVWSFLCIVLIPVMIAKHS SIRSWSIMRMMSTLGKSTKRKPNHTDHNIRS >gi|312956945|gb|AENW01000008.1| GENE 23 32267 - 33001 741 244 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKERIRLETLEIPDIPEDDIVEVITNVKELLQKRAVKKYESSILKSLRELLYVHGWKSI VLQGGLTLLVALAVWLCLPNGYKMNSVAFLSLGSSLLSVAVTVEVFRCDIYGMKELEMAS PYSPQRMLMWKMLLLGGISFLGILIIAVSISLQTDIHLLTLLYSGFIPFLLLNAFTLHLY AHDQVLQVFLTVYGFAAGGLVLLELFGVGYWIGFLEQYGGQLFLAVLVYSGYVLWDHCRR NLHV >gi|312956945|gb|AENW01000008.1| GENE 24 32998 - 33525 536 175 aa, chain - ## HITS:1 COG:alr3280 KEGG:ns NR:ns ## COG: alr3280 COG1595 # Protein_GI_number: 17230772 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Nostoc sp. PCC 7120 # 20 170 50 213 218 68 29.0 5e-12 MQMKINKHAVSKEAELETAIRDAYPKVYSYLYHRTLDAALSKDLTQETFYRFYRHLDQYE EQGKLLNFLYRIARHLVYDHTRSRRYTDELQEEQMRDDTYNGERLFQKKEEFVILRSWIS ERPPHLQDVLLLRYDEGLKYRDISQVTGIHVSTVKSQVRLALHILKKRAQKEGWK >gi|312956945|gb|AENW01000008.1| GENE 25 34174 - 34776 621 200 aa, chain - ## HITS:1 COG:no KEGG:LSEI_0329 NR:ns ## KEGG: LSEI_0329 # Name: not_defined # Def: kinase # Organism: L.casei # Pathway: not_defined # 2 196 6 201 213 171 46.0 2e-41 MKKTLVLLAGYPGTGKSYLMRQIQEAYPTFQILSPDAYKEEMWDRYGFDTMEEKEADIQK AWMEYYKDMEDMMQMDISILSDYPFSDKQKSRLGQLAATHAYQIVTIRLVADLDILYERQ RARDLDDTRHPGHIAGSFHKGDILQSRDEQPCMVGYEEFMNRCKNRGYGTFALGTVLELD VTDFSRADYPALMQNLNRIL >gi|312956945|gb|AENW01000008.1| GENE 26 34859 - 35695 971 278 aa, chain - ## HITS:1 COG:YPO0844 KEGG:ns NR:ns ## COG: YPO0844 COG0191 # Protein_GI_number: 16121152 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Yersinia pestis # 7 272 8 274 284 189 36.0 3e-48 MYKNLIEMFRENEGKGAVGAFNLHCFEMLPAMIAAAQELGTPIIIQTSLGTAEYIGFEAL IAAVKALAKKADINVCLHMDHCKSIEALKKAIDLGYSSVMYDGSDLPLEENIKNTQEVVA YAHERNVSVEGEIGSIGGAEDGIVVEKSDAAYTKPADAIRFVKETNVDALAVAIGTTHGQ YKSKANINYELLETLQDKLPDVGLVLHGGTGVSDEDMKRCAKGMKKINVGTELNKSYIEE VNASFPDATPLTSLRKLFTPANDHIKRIITEKSTLFKI >gi|312956945|gb|AENW01000008.1| GENE 27 35735 - 36115 560 126 aa, chain - ## HITS:1 COG:no KEGG:Thit_0264 NR:ns ## KEGG: Thit_0264 # Name: not_defined # Def: hypothetical protein # Organism: T.italicus # Pathway: not_defined # 1 124 1 128 130 83 45.0 2e-15 MFFKRKEKKEEPVQEEVVQDTGELLANAKRAVAELKDKSGEERIAALNEIGILYAEAKQT DEAITYLEMSLSEKKDLGKGYRALLNLYNTKRREAAKAKDDEQIQYYLRKIDEMMAISKE VTRASF >gi|312956945|gb|AENW01000008.1| GENE 28 36126 - 37409 1630 427 aa, chain - ## HITS:1 COG:YPO2782 KEGG:ns NR:ns ## COG: YPO2782 COG3037 # Protein_GI_number: 16122986 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 421 1 418 418 347 46.0 2e-95 MQIVNFIIDNILTQAPITIALIAMLGLLLQKKPTGQVISGTFKTLLGFMVLSAGSSVIVQ ALIYFGAIFTEGFGMQGLVPSIEAINGQAMGELGLGSEIALTLGAIFIFNIIIARFTKWK YIFLTGQALLWMSTICAVFGYWCGLRGVTLILVGGLIGGIFAVAMPAIAQPYVRKITGND DIALGHFCTVGYVLTAWVGKLTGGKKSVSTEELQLPKGLEFLQDTYLSIGIVMIPLFLVT AFFAGPEFCAEYAGATNYLVHAFLQAVQFVVGVYVLLAGVRLLLAEIVPAFRGIAMKLVP DAKPALDCPVLFPYAPNAVIIGFVSTTIGSVIGMFLFPMFGLPMILPGMMTNFFAGGCAG IFGNAMGGTRGCIISGIIHGLFITLLPAILSPMLADIGFLNATCTDVDTIVCGLLYGWLL KPVLGLF >gi|312956945|gb|AENW01000008.1| GENE 29 37441 - 37728 323 95 aa, chain - ## HITS:1 COG:STM2343 KEGG:ns NR:ns ## COG: STM2343 COG3414 # Protein_GI_number: 16765670 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 92 1 90 90 60 33.0 5e-10 MKILMVCGNGLGSSFACQMTVETVLQELGVSASLDHCDLSSVKGMKADLILSGKNFESQF ANLELTTPTIFLNRLVDKNEIREKIVPFLKEQGKL >gi|312956945|gb|AENW01000008.1| GENE 30 37766 - 38206 605 146 aa, chain - ## HITS:1 COG:STM4385 KEGG:ns NR:ns ## COG: STM4385 COG1762 # Protein_GI_number: 16767631 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 6 140 7 152 154 101 36.0 5e-22 MKGIELSEKNVRLHVSARDWEEAVRIGGRILVENGTAKESYVEGIVNSIKEYGPYVVISK GFAIPHTRAEDGSLGIGFSLITLREPVYFDPKDDPVEVMICFSAIDSQTHLDILKMIVTF VEKGYVEKIAKLDTIDELNALLQNEE >gi|312956945|gb|AENW01000008.1| GENE 31 38211 - 40184 1960 657 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 7 508 5 497 499 238 30.0 2e-62 MELYNKRMIQILELLTQNRKVLSSDQIALSIGVSSRTIRNDIKELNGILHAHGATILSEA GSGYYLNTEQPEAFTELMDQLHAEEEKDADTIIPSDPRDRAAYIMQHLLKNTLRNEEIID PNDLADEVFVSMSTLKKDIRQIDKMLERFSLKVGISTKKGVHIIGSEANIRYCISEFIFK HNDARASRETGFFDDIVSEELFSQLHEILLETMKKYDMRLTDIAFKNLIVHIVIILKRSF HERRVDYEEAEIRQLESHMEFAAAKEVLAVIYHKLHIDITDEVYYLTQHLISSKKFLTTN FTDENEEYEFKKEIQAILYRIREDTNVDLSDDTQLINGLAVHLSVAVQRLRFHMNIRNDF LDYMKNNYPFAFELAVKASEIVEHVFSIKTNENEIGLLAIHFGAALERKGLNEKQKIFEA VIVCASGMATAMLMKERVKQFFQNRIHIVKTCPLYEVTQALIDSVDLVLTSVPVETFHSE KILQTQLLLDDRDVRNIETFMTHHHEDSGYFKEIFREDLYFTNLKLKTRDEVLHFITDAM IEKGYMKEENKQSVFKREAMATTELGSMVAMPHSLENDMLEASVSVTILDKPIVWDQEKV QVVLLLNIPKSKYGMWEDVFKTLYKYLIRDFGVRRLAKGCTYEEFIRDLEYQRQGKE >gi|312956945|gb|AENW01000008.1| GENE 32 40999 - 42159 1353 386 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 385 1 388 389 493 60.0 1e-139 MENFIYSIPTEIYFGKGQIVNIGRIVSGYGRKALLVYGGGSIKRNGIYDDVVKIFKENGI AWCELSGVEPNPRITTVREGVKLCREEGVEVVVPIGGGSTIDCAKVIAGAVSYDGDAWDI VLNPAKVVSVLPIVTVLTLSATGSEMDTFAVISNLETNDKIGMGHEDMRPKASILDPSYT CSVSAYQTAAGTADIMSHIFECYFSNVQGYMQDRMAEGLLKTCIEFGVRAVQNPEDYEAR ANLMWTSSWAINNFIKLGKTVEWTVHPMEHQLSAYYDITHGVGLAILTPHWMEYVLNEET VDKFKDYGVNVWGIDREKDPFEIAHEAIKKTKDYFVAMGIPTTMREVGIKDETNFDVMAE KAAADLKGAYVELTKEDVKNIYRAAL >gi|312956945|gb|AENW01000008.1| GENE 33 42332 - 42802 509 156 aa, chain - ## HITS:1 COG:frvA KEGG:ns NR:ns ## COG: frvA COG1762 # Protein_GI_number: 16131740 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 10 156 1 147 148 102 32.0 3e-22 MAAQVEEMNMNLITEQHIIFDMEGSTQKEILHALAEIAFREGKVSDTDTFFQELCKREQE CTTGFGKGIAIPHARHACIKEAGILFVRMKHKIEWKSIDEKPVEAAVCLLAPDDKNDFHL KALSKLARRLMHEDFVDILKTAEKQQILSEIIDTVS >gi|312956945|gb|AENW01000008.1| GENE 34 42961 - 44004 1069 347 aa, chain - ## HITS:1 COG:no KEGG:MCP_0128 NR:ns ## KEGG: MCP_0128 # Name: not_defined # Def: hypothetical protein # Organism: M.paludicola # Pathway: not_defined # 1 309 1 296 349 147 30.0 5e-34 MKNTVENFVPQGGKHCITNSLKQIFTYYGYPMSEELMFGLASGLSFLYLNQAASPMINGR TKVFEFEKKLADRLQITIHCRAGKNYERIFQTTKQMIDAGEPVLVYVDMPFLPYLGLNAQ SHFGGHAVVLFGYDEEQHKFLVSDRDQQDAPIQTPNGLVAKDYHMVDYEDIKRARSSSFR PFPAQNKYLTFDFQGYRTVDKQILREAILDTCDSMLHPPAQLLGVSGILKFSREINKWKA FHAEKLKLAGITNYFQINERGGTGGGIFRRMYGDFLKEAAGIWQDTRLFELGEQFIAVSF LWDAVAELLWKLSQTKDIRLLEMISQRVLVIYERESSLYHALYALAA >gi|312956945|gb|AENW01000008.1| GENE 35 44001 - 44810 694 269 aa, chain - ## HITS:1 COG:BH3496_1 KEGG:ns NR:ns ## COG: BH3496_1 COG0789 # Protein_GI_number: 15616058 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 2 105 5 107 117 62 37.0 7e-10 MYTISQFSKLCGLTVKALRYYDTEGMLKPSFRKAENQYRYYSDEDLKTAQMIQYLRSLEF TIMEIKDILNNSRGEDLSYILQEKISRMEANIQKERELIQRMREHSFAQGEEYVENTYAI NTATVAGQLIASIRFTGRYQDLDLYIPLLYKAVKGNANDKHFNLYHDEECKEAADIELCI PVKKEIHHPLLTCRYLEKLHALHTTHHGGYDTLWIAYKALFAYANDQGIRILTPSREDYV KGPGMLFRGNPDAYVTEIYLPFAREENRR >gi|312956945|gb|AENW01000008.1| GENE 36 44941 - 46911 1586 656 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 494 1 491 499 109 22.0 2e-23 MLSRRQKDILQQLERADDFISIRTLCETCSLSEKTMLSELTVIEAILQEQEIGVLIRKRG SGVSLQLQKNKHRQYEMLLHTRQDQEEAFIVRSLFFHNADHVWSEKRFCEVLHAGRHVVH GYLRELSEFCCNYNIVIRNRQKYGILVKGDEFHIRDCIIALFMERSDYPFVKGKVGQILD EQQSKQFQELFQGFLYHPLETCVLELEKDCHVYLDHISRLNVFLHLCMCILRVQQKAFVD MRQEQMDMLHKKQRSNRLLKVFETLEAIYHILLPEQEKCYIQLYLDIYGLVDDSMFDVVR EDLEHTEHFHTFVDQFLDILNGILSISIDREEELMEGLLTHLAGTIIRLKNGVRIHNPLL HEVRSSFSSIYQATWATSILFDQYYSVTITEDEIAYIALYLGVVREKTDYDLHVCLLVKR YDNVIRILREQIQKLHHAIRIDDIMTEQEYQSRKQHRRWDLVIATIDLHDDFPQIHVNEI LKEEDCLYIRSIVNHILDKKILHSENNLPHADSMFDENLIFLEQSVENKEELLKQICEKL LKAGYVKEPFFSSVMQREREISTEIGSGVAIPHGNAQYVNDTVIVYAGLQKTIPWGRDEH VQHVFLPVISVSNKNEVERSIKNFYRRLIALIEHGEIRRLLDMRDASEVIAHFEDI >gi|312956945|gb|AENW01000008.1| GENE 37 46954 - 47769 738 271 aa, chain - ## HITS:1 COG:lin0378 KEGG:ns NR:ns ## COG: lin0378 COG0191 # Protein_GI_number: 16799455 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 271 1 283 286 191 38.0 1e-48 MLVPMRNLLDKATIEGYGVVAPNVINECTARVCIEAAEELHAPLILDVGYVFHPDLVFLG RMLEEIAVRSSVPIAVNLDHGATYEQVMWALRAGFTSVMIDRSTASFEVNVRDTAEIVKA AHAVQVSVEAELGHVGDGCSYGREACLYTDPIQAVEFVKQTSVDCLAISVGTAHGVYAGK PQLDFKRIREIRQAVDIPLVLHGGSGSGDANLQKAIQCGISKINIGTDNFAAAIKAGGQA GEPHMVYHRMQQGFKDMVKHYMHIFHQEGKA >gi|312956945|gb|AENW01000008.1| GENE 38 47785 - 48834 1080 349 aa, chain - ## HITS:1 COG:lin2240 KEGG:ns NR:ns ## COG: lin2240 COG1299 # Protein_GI_number: 16801305 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Listeria innocua # 1 326 1 335 363 271 44.0 1e-72 MKKLQLKKHVLTGIAYMIPVVVAGGICLGISRIFGGVDIQEGTIAAALEQIGNAAIGFTV PVIAAGIAYSIANRPGIAPGLAAGTLANVVGAGFLGGLAGGFIAGYFAWLAKTYIKPPKL IEGLMPVLVIPVLSTLAVGLVFMYLIGTPLAMIQQGMTDWLLSLQGESGFLMGAIIGGMR FDMGGPFAQAAGAFCDAMLTQGVYAPKAASMVSGMTPPVGVAIAVFLARKRFTKAEHEAA KTALPLGLCFITEGVFPFLASDPLRIVAACTAGSAISGGLAVIFGCLCPIPAGGVFAIPF ITEPFLFVVAFLAGVAVTAGVLLLLKPNRSAVAEDTEEDYDFTIEFNTK >gi|312956945|gb|AENW01000008.1| GENE 39 48845 - 49159 316 104 aa, chain - ## HITS:1 COG:lin2241 KEGG:ns NR:ns ## COG: lin2241 COG1445 # Protein_GI_number: 16801306 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Listeria innocua # 1 101 1 101 103 107 53.0 8e-24 MKIVGITACTAGIAHTYLVREKLVNAARELGHEIKIETQGSIGVEDILDDQDIAQADVVI ISADIEISGRERFKGKKILDMPMKMVMKAPKKLLMQIEEKLKES >gi|312956945|gb|AENW01000008.1| GENE 40 49175 - 49636 553 153 aa, chain - ## HITS:1 COG:SP1619 KEGG:ns NR:ns ## COG: SP1619 COG1762 # Protein_GI_number: 15901456 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 148 1 147 149 100 40.0 1e-21 MELRKILHEDDILIPMQADSKEEAIRQLAEMLKAHEVVMDMDAFMSDVFLREAEGVTGIG DYIAIPHGKSKGVKENRIAVGILQEPIYWESIDELPVKVVILFAVCARKHDADQSHLSMM AAVAKSLAYDDVKQRLYEAESRQDVMEAILSRQ >gi|312956945|gb|AENW01000008.1| GENE 41 49872 - 51074 1253 400 aa, chain - ## HITS:1 COG:FN1186 KEGG:ns NR:ns ## COG: FN1186 COG1473 # Protein_GI_number: 19704521 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 37 395 2 353 359 232 36.0 1e-60 MKEERKKQLEELYAAKVQAKAEEISKWIYEHPEDGDQEFLSSAYICEQLKETGFSVQLPY GSLKTAFRCELKGSKPGATYAFLAEYDALPGYGEQHDELAHACGHNWIGAVCAGVGLMFA QMQEELEGTIVIMGTPAEETTGGKCVLVEEGAFDDVDFAFQLHLGAENNAHVVTLAMDSL EFTFHGKAAHAAAYPHLGVNALDAVNLMFTGISYLRQQLRCDTRVHGIITKGGEACNIIP DLCACKFYIRAADKAYMEEISAKIVNIAKGASFMTGTQMEYRNFENTYYDLVNLESFQQL YVENAKLCGSGDFVDSDADASGSSDVGNVSHVCPMMYSELALKGPTPAYAHDVNFLEYLK LPCADDKLRKGIISLCLTVFDLYDEKQREDIMNEFDTRKE >gi|312956945|gb|AENW01000008.1| GENE 42 51225 - 52847 1855 540 aa, chain - ## HITS:1 COG:BS_oppA KEGG:ns NR:ns ## COG: BS_oppA COG4166 # Protein_GI_number: 16078208 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Bacillus subtilis # 5 536 3 541 545 200 30.0 6e-51 MKKLKKLMLSLFMGISILSLSACGGGEESSSELKVALGGQITSLDPALADDTYSMIVIQN MYRTLFKLDEEGKLVKDLCEDYKVSEDGKTYTFTIKDAKWSDGEAVKADDFVYGIKRGLS YGPENSYNAQDGRKYIVGAQKAYEKNMKIKDMKDVGVKKVDDKTFTIELIQPVQYFDKLM TQGIYTPLRSDIAKEKDSEWSLSADVPVNGPFKAESVNPADAVDLVKNTEYYEADKTTLE KLHFKIMEDSVSQYQGYDAGEIDFATYVANEGYTNYKGKDDLYRVDPYVSNYFIDINSLS TENKALQDVNVRKAMAMAVDRDGIVKVLDTGDYVMPLFGLVPHGIQGEKEDFRKEADDAG DLIKYDLKGAQALMKKAGYSDSKKLTIKYKTTGQQVNMDIAQILQEQFKKIYIDLKIEQV EQGVFYQQVDGGQFETSRYGLSATTLDPAAAYLGMWQKESQAVLIFDDAEYEDLMAKAAL ETDAAKRMQLLHDAENRMIVEQAYFIPLVTNTQVMLKKPSVKGLERTPAAMFYFEHVTIE >gi|312956945|gb|AENW01000008.1| GENE 43 53056 - 54465 1278 469 aa, chain - ## HITS:1 COG:BS_bglH KEGG:ns NR:ns ## COG: BS_bglH COG2723 # Protein_GI_number: 16080977 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus subtilis # 5 469 24 481 481 514 53.0 1e-145 MKSTFLWGVATAANQCEGAWQEGGKGISTADILYDGTAGEYPENLKIYPERYYTYHTGND FYHRYKEDIALMKEMGIKCFRMSIAWTRIYPKGIEDKPNEEGLAFYDRVFDELKKQGIQP LVTISHYEMPLYLVQAYGGWKHRCVIDHYVKYAKTVLDRFHEKVKYWITFNEVNFISTIP FCAGGLLIRGKDNKEQDMFQGAHHQLLAHALVTAYSHGSYPDLKIGCMVCGTLAYAQTPN PQDAMEQLECDRETYYYTDVFVRGRYPNYADSFLKKKQVVLHKQEGDDEILAEGKVDFLA FSYYFTRIAPINPNNDPDLTDNERMLGKLENPYLQRTQWGWVIDPVGFRLALNKFYDRYQ VPLFVTENGLGARDVLCEDKRIHDDYRIDYLRQHIRELKKAVEIDGVDVMGYTSWSGIDL VSATSAQITKRYGHVYVDYDDQGNGTGNRFKKDSFAWYKRVIETNGEQL >gi|312956945|gb|AENW01000008.1| GENE 44 54462 - 54800 316 112 aa, chain - ## HITS:1 COG:lin0917 KEGG:ns NR:ns ## COG: lin0917 COG1447 # Protein_GI_number: 16799988 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 13 103 17 106 116 57 42.0 6e-09 MKQTKEECVITAAMNIILHAGNARNILRDAGKCIAEGKNLDAIAQQLEEARGSILLAHKA QTDILHEEAEGKHIEVTVLFSHAQDTLMTTQSELFFVETLYELEMNRRKQTL >gi|312956945|gb|AENW01000008.1| GENE 45 54806 - 56062 793 418 aa, chain - ## HITS:1 COG:lin2459 KEGG:ns NR:ns ## COG: lin2459 COG1455 # Protein_GI_number: 16801521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 409 1 419 433 130 27.0 4e-30 MKNIYVRITAWLAGPFSSKISKFTQNAYVMAIQNGFQTVLPMILVGSIASLINTLRNFWE WVPDLSLVNQYSFGLIGIFLAFILPYNIMENKKQNRAKLISGFTGVSVLLALCNPVFKEG NISLNAGYIGTGGMTVGLLVGLLIGAIFAVYFKHGLFSKDTSLPSIVVNWFESIVPVFLV IGIAILIAGNGVNLFDLMEEVVSPIAAIGNTYLGFVLLYFIMALCYSLGLSAWAVYPIFL ALALNNIAANIDLVAAGKDAVFITTVEVVFCGWCCMGGMGCTMPLNIQMLRSKSKKINAI GKAAIFPSLFNINEPVMYGLPVVWNPIMMIPYLLVSFIVPSLVYLVLTVGFVDIPARAFQ MNFLPQPVATFLTNYDFRGVIFWILLFILIYLIYLPFFKVYENQEMKKEAAEEGKETV >gi|312956945|gb|AENW01000008.1| GENE 46 56079 - 56384 300 101 aa, chain - ## HITS:1 COG:BBB06 KEGG:ns NR:ns ## COG: BBB06 COG1440 # Protein_GI_number: 11497017 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Borrelia burgdorferi # 1 100 1 100 105 80 38.0 7e-16 MKILLICGNGVSSGMIAQKIRKAGIARGYDAVSDAYSYSQLSEVVDEFDVVLVAPQMKFN EDMIRDICAVHHKPYAVLDNFVYSTLDGEKGFDTVLSLLNE >gi|312956945|gb|AENW01000008.1| GENE 47 56550 - 58463 529 637 aa, chain + ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 504 1 493 505 135 23.0 2e-31 MDKKKKLLALLSSANHPVTGKELSSRLNVSDRTIRNYIREINEEKLIIQSSSNGYWITVL DSPCNKRKIESSLVYDFSSQNERLLYIAERIITSSEEADLYDIADDIYISYSTIEKDLIQ IRGIIKDFHLTLLRGNGKATIQGSEESKRSFIRYLLSQQDSATVQNTLHAICEDIHIPFD TLKDLIIYQTRQQKLYASDYAIKNILTHVIITLSRLQNKYSLQLQSSPSAKEKEPESICA ANIIQEIETNYNIMFNTEEKNQLIFLLMSKTTRLDHNNQTRKYTQDFISLEYIEFTKQLV ENINYIYYIDLNDSDFINFFSLHLKNVLFRWNNNTFNTNPFSDQIFIQNPLIYDIAVYIA NEIRNRYHCKLNKDEITFISLHIGAVIEKKAEESHTYKALLIMNEYYYPVSNYLYQFQKE FQNKIDIVSIMQSIHSIDTEGIDFIIDASGEQNRSYAVPMVYISPLFDRKDLNKVYDFLN KLIDQQHTNTMKHQFHSFFSKDMFELEHYELDANAMIRYISQKLIDAGIAPASFTQSVLE REEITSTSFDNKVAIPHSILCSTSRNCSYVIVNKTPMKWGYFEVNIIIMIGINHNQRRFF KELYSNLLEKLQDMTIIQELIKVKSYDAFIKLLTGEC >gi|312956945|gb|AENW01000008.1| GENE 48 58942 - 59604 314 220 aa, chain - ## HITS:1 COG:no KEGG:CLL_A2076 NR:ns ## KEGG: CLL_A2076 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 2 213 334 554 558 127 39.0 4e-28 MKVEFDELMKGNAIEKNIKSELTYREMDDIDNIYSFLLFTGYLKIEKSSDLYRYYLKIPN KEIEMIYVQIFSQWFDAVIKKNSTSFYTALYKGDEEEARKVLNAILFQSISYFDAKEDFY HGFLTGMLQEFHVISNRESGMGRFDLAVIPDDFSKRGLIIECKHAASLRSLKAESEAAAE QIREKQYIEGYLADGYTDFIGYGIAFYKKSCYITKLNKNR >gi|312956945|gb|AENW01000008.1| GENE 49 60098 - 60424 130 108 aa, chain - ## HITS:1 COG:no KEGG:CLH_3192 NR:ns ## KEGG: CLH_3192 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 108 72 179 563 70 37.0 1e-11 MFNGLEISKDKEACKHQNQYPVLFLTLKDMKRNHFEAQIDKFKSIISMLVDQYAELLDSP KLRESERKLLSQYLNEAAPVNKLMDALFNLSVFLEKHYEQKTIILIDE >gi|312956945|gb|AENW01000008.1| GENE 50 60409 - 60645 185 78 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1380 NR:ns ## KEGG: Lebu_1380 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 52 10 62 552 73 66.0 2e-12 MKMLPIGIENFKELIDNKYYYVDKTALIKDVSSEKVALYTRPRRFGKTLNMSRRCPPMAC YTISFPTRKKKTAICLMD >gi|312956945|gb|AENW01000008.1| GENE 51 60831 - 61874 761 347 aa, chain - ## HITS:1 COG:ECs4465 KEGG:ns NR:ns ## COG: ECs4465 COG3177 # Protein_GI_number: 15833719 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 51 291 122 355 431 76 27.0 9e-14 MRSFDYLKIRDKKWDLEVLTLIAKIHEYKGKQELYIKQKPMSLEKLVEIAKVQSTEASNQ IEGIVTTDTRIKQLVNEKTSPRNRDEEEIAGYRDVLNMIHESHEYIPIQSNYILQLHKVL YSYSGESFGGKFKNTQNYITEVRADGTRAVRFQPLAPYETSQAIHVICESYNQAIAADIE PLLLIPSFITDFLCIHPFNDGNGRMSRLMTALLLYKSGFEVGKYISIETKIAKTKLNYYE ALQDIDEGWHEGDNDVTPFIKYLLGVILACYRDFENRLELVEEKKPALEMVRNAVKEQIG KFTKAQIVEYLPALRRAAVEKALKILVDEGEITRHGGGRSTFYTRND >gi|312956945|gb|AENW01000008.1| GENE 52 62190 - 64088 1753 632 aa, chain - ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 12 632 11 660 660 434 36.0 1e-121 MKKGVEKTDLYQLHLLSGLKASPSGNRLVYVHTQMAEASDTYEKNLWLLEGKRNFCIYQK QKFSAFLWENEHTLLIQKPAKEQKTEFVRLHLDTLCTTPAFTIPANVVQLERISVQHYAY LAEESVQKQNDDDTIVLTQIPFWDNGVGYISGKRNHLYVYYEESQTSKALFAGNWHVENL SVSNTQIVCSAQEYSTKKPLTQGIFTFTTDTLRQTELLNCDTLRIEAVTCEKDTVVFTGT DMQQYGNEEAADIYVWTKEQGVKKLLDCEHYAYCNIVSDCHVGASTSIMMKNQIVYHLKN EEGRCLLYALSMDGRDICLTPKANVIRDIAVSAQGWYTLEMEENALEEIYYRKQDDCQKL TAWNAEYLQTHRHVQPKEILYTNREGGIQKGWILYPADYVEGNRYPGLLSIHGGPRCAYG NVFNHEMQMFASMGYMVFYTNPRGSDSFGEEYADLRGKYGTIDYEDLMAFTDVVLQETPQ LDSGRLGVLGGSYGGFMTNWIITQTDRFQAAASQRSVANWTSDFGTSCIGYTFDPNEMQT TPWKDVMTMWTASPLAYANKVKTPTLFIHSLEDYNCPLSEGLQMFTALQYHDVESRMCLF PQENHELSRSGKPKHRLRRLQEMADWFDAHLK >gi|312956945|gb|AENW01000008.1| GENE 53 64085 - 64666 724 193 aa, chain - ## HITS:1 COG:SA1052 KEGG:ns NR:ns ## COG: SA1052 COG0194 # Protein_GI_number: 15926792 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Staphylococcus aureus N315 # 3 187 5 190 207 134 39.0 1e-31 MNKGLLFVLTGASSVGKKDIRDRLLGDEQLHLNYSISMTTRPKRGEEVDGRDYYFVNHEA FAQALRNRELLEYTEFDGYYYGTPKHQVDFLLNSGKNVMVEVEAQGVGQIKLQYPDALCV FVEPESMEELEKQIMLRYRDDAASAQRRINKALVELELSTLFRHTVKNTDVNAAYEEICE LLKEHMQERGNKG >gi|312956945|gb|AENW01000008.1| GENE 54 64792 - 65766 955 324 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 324 8 329 329 372 56 1e-102 MSDAVLKVENLKVHFPVKGGLFTKKQVVKAVDGVSFEIYPRETFGLVGESGCGKSTTGRA IVKLYEPTSGTVYYHGEDVTKIKGSHLAEFRRNVQMIFQDPYASLNPRMTVGEIIREPMD IHHIFNTKEEREQRVRELLDIVGLKPDHIRRYPHEFSGGQRQRIGIARTLALNPQFIVCD EPISALDVSIQAQVINLLEHIQKEMGISYLFIAHDLSMVKHISDRIGVMYLGNLVEIGDS DDVYHRPLHPYTQALLSAVPIPDPRVAREKKRIVLEGELPSPLDTPSGCVFRTRCPNATE RCAREKPGMVNVGKRTVACFLYEK >gi|312956945|gb|AENW01000008.1| GENE 55 65763 - 66776 432 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 3 278 8 278 563 171 35 1e-41 MSMLEIQHLSTDFETENGMVHAVRDVSLSVDKGEVLGIVGESGSGKSQTMFSVMGLLSGN GIVKDGSITIDGKEISPKAFSDRKEYEQVMDHIRGNDLAMIFQDPMTFLNPVLRIETQLM EPILNHMDISKEEAKKRAIELMRKVGIPSPEARIRQYPHQFSGGMRQRIIIAIALACDPK IIIADEPTTALDVTIQAQVLELISHLKEEIDSGIIMITHDLGVVASICDRIAIMYGGKIV ETGTVFEIFEHPQHPYTIGLLSCISNPNELEKKELHPIPGSPPDLLNIQENCPFADRCAS AMKICKLHMPQETQISATHRCSCWLQHPKACKGGEVQ >gi|312956945|gb|AENW01000008.1| GENE 56 66789 - 67727 1364 312 aa, chain - ## HITS:1 COG:CAC3643 KEGG:ns NR:ns ## COG: CAC3643 COG1173 # Protein_GI_number: 15896876 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 10 311 7 308 308 286 48.0 3e-77 MSDKLLQEELSDDLFERLDDSEKNAEKIAYESRTYLADAWHRFRQNKLAFVGFCFLMFML LCAIIIPMISPYTYDGQNLELRNIGPSLQHLMGTDKFGRDILVRIMWGGRVSLSVGFAAA LISLGVGVLYGGIAGYFGGKIDMAMMRFVDMMYSIPDMLYVIMIVVVMGPSMSSILIGIC ISSWMGMARQVRAQVMTLKEQEFSLAAKVLGAGTGRIIFKHLIINSMGPIIVSVTMLVPS AIFYEAFLGFLGIGLSAPQASWGTLANEARSTLTSYPLQTLWPILAICLTMLALNFIGDG LGDALDPKKKKK >gi|312956945|gb|AENW01000008.1| GENE 57 67740 - 68657 1282 305 aa, chain - ## HITS:1 COG:CAC3644 KEGG:ns NR:ns ## COG: CAC3644 COG0601 # Protein_GI_number: 15896877 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 305 1 305 306 268 47.0 7e-72 MPKYIIKRVLIGFVTLFVLASVTFFLMKATPGSPFSLAKYKTPEALAAAEAKYNLDKPLV EQYVIYLKGVAQGNLGESMINTGRSVSYYIKTGFPVTARLGLIAFVLALVGGIALGTGAA LSRHKWVNNLCMFVATIGVSVPSFLIAMIMLIVFGVQLHILPFIGLNSPLNYIMPALSLA FYPIAMIARLTRSSMLEVMNQDYIILARSKGTPYKKVVIKHALKNAMLPVVTYAGPMFAF MLTGSFVIESVFSIPGIGSAFVSCITTRDYPIIMGLTIFLGFLVITFNLITDILSAIIDP RIKLD >gi|312956945|gb|AENW01000008.1| GENE 58 68721 - 69368 913 215 aa, chain - ## HITS:1 COG:SP0754 KEGG:ns NR:ns ## COG: SP0754 COG0517 # Protein_GI_number: 15900649 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Streptococcus pneumoniae TIGR4 # 1 212 1 212 218 160 45.0 1e-39 MYVKNRMTKHPICIDVNSKISDVVDIMSEKELHRIPVISGKKLVGLVTEGMISKKGASKA TSLSIYELNYLLSKTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVG ILTSNDVLSAFLDILGYRTSGSRVCIEVKDELGTIGKISEIFVRNNCNITHLGVYSQHNG FADMIIRIDTFQTDALASDLEANGYKVLSITKNPN >gi|312956945|gb|AENW01000008.1| GENE 59 69373 - 70077 296 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 231 245 118 29 8e-26 MLKVEKLNVHYGVIHALKDVSMEVKEGEIVSLIGANGAGKTTLLQTISGLLKKTSGEVVF LGKSMNKVSAKNIVKEGITQVPEGRHIFSGMSVYENLLMGAYLRKDKDGIKADLQDIYQR FPILEKRSSQDASTLSGGEQQMLAMGRALMARPKILLLDEPSMGLAPILVKEIFNIIKDI NEKGTTVLLVEQNAKMALSIADRAYVMETGNIVMTGTGAELVNSPEIQKAYLGG >gi|312956945|gb|AENW01000008.1| GENE 60 70079 - 70855 251 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 4 237 9 221 309 101 30 1e-20 MALLKVSGLTKNFGGLCAVSNVNMEINEQELIGLIGPNGAGKTTLFNLLTGVYEPSEGKI ELNVDGAMKEIGGMKPYAVTRMGLARTFQNIRLFKNLTALDNVKIAMHKNIKYGTLQAIL RTPNYYREEERVEQQAEELLKVVHLYDKRNELASNLPYGEQRRLEIARALATKPKVLFLD EPAAGMNPQETADLTRLIHQIKDDFHLTVILIEHDMSLVMTICERIYVLDYGKCIANGVP EVIKNDKRVIKAYLGEDI >gi|312956945|gb|AENW01000008.1| GENE 61 70857 - 71816 1415 319 aa, chain - ## HITS:1 COG:SP0751 KEGG:ns NR:ns ## COG: SP0751 COG4177 # Protein_GI_number: 15900646 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 7 317 6 317 318 265 54.0 6e-71 MKHIFSKLNLCWILFTTALLTIITLLMQGGVINFYYQSTLYTIGINIILAISLNLIIGVT GQFSLGHAGFMCIGAYAAAIITKATPNLGGFALAVVIGGVISALVALVVAIPTLRLKGDY LAIATLGFSEIVRIIVLNMTITNGAAGLFGIPKLTTWPLLLFCLIVSLLIVLNFSRSAPG RACISIREDEIASEAMGINTTKYKTIAFVIGAVLASLAGALYACNFYVVKPDLFTFNKSV DILILVVFGGMGSFTGSIVAAVVIGFINMYLQNFADVRMIIYGAALVLIMVFRPEGLFGT KEFTFSGLLRRFSKKKEVR >gi|312956945|gb|AENW01000008.1| GENE 62 71821 - 72699 1283 292 aa, chain - ## HITS:1 COG:SP0750 KEGG:ns NR:ns ## COG: SP0750 COG0559 # Protein_GI_number: 15900645 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Streptococcus pneumoniae TIGR4 # 5 292 2 289 289 281 61.0 9e-76 MTEFFQQLVNGLSIGSIYALIALGYTMVYGIIKLINFAHGDIYMLGAYVGFISIAQLHLG FFPALLLAMVVCGVLGVIIERIAYKPLRNATRIAALITAIGVSYFLEYSTQKIMGPGVKT YPSVLSNQTFHVFGIQIQMQQIYILAITIILMLALQFIVRKTKIGRSMRAVSVDADAAKL MGINVDATISYTFAIGSALAGAGGVLVGMYYNTINPLMGMVPGIKAFVAAVFGGIGIIPG AMFGGFFIGIVEALVTAYGSSLYKDAVVYAILILILIIKPAGLLGKNVKEKV >gi|312956945|gb|AENW01000008.1| GENE 63 72772 - 73965 1665 397 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 21 386 16 374 383 218 36.0 2e-56 MGNFKKFMAMAAVSCMALTTMTACGNSGDAGSGDGDTNEIKIGLNYELSGETANYGTPEY NGSMLAIKQANANKDNKFSYKAIKGDNKSQADESTNVATKLITSDGVKGIVGPATSGASA ATYQIATDNKVLVVSPSATATNVTLQDGKTKESVYPYVFRVCFEDPYQGAAMAVYAKDTL KKTKAAVISDSSSDYAKGLSKAFQDKFKEKGGNIVTELNYQAKDTDFNVQLTKIKGMDFD VIYIPGYYNEVGLIIKQAREMGIDVPIVGGDGFDSTDLVKLAGNKNLNDVFFTTAYTTVD ASDALTQFIADYKKEYNEDPSMFSALAYDATNVLIQSFEKAGSADTEAAQKAMTELDFKG VTGDFTFDETHTPKKAALVVELVDGEQKNAVEVDPNK >gi|312956945|gb|AENW01000008.1| GENE 64 74225 - 75034 714 269 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRNYAMLAVVLLCAIVLSSVSDSAAVYTHSQSYSGELTFHREITIDDFFHYEMVDTVADS TAVYDKEQKSIILQNESGAFIQHTKLPAKGDYMASVELTSIMPDTLQSIAFQFGGSANVT SEGEEGRTNYTAMGNILKFEDNGDLVIINQGFQKNLNQHDQYVEYSNHQVYHRIPKAELP ALNGRPVTLRVFVKYNRDNENCSIYIVINDTLLNKDALIPAGRAMNTQFADQVGANQIIT GVSSYGAGKQVTFTKLKIEPWDGERSSVY >gi|312956945|gb|AENW01000008.1| GENE 65 75049 - 76458 1302 469 aa, chain - ## HITS:1 COG:no KEGG:DSY4473 NR:ns ## KEGG: DSY4473 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 463 1 463 463 316 38.0 1e-84 MIYNHNIITKEQKQAFVERKESRNKIFFYGIIVALLTFSLHFMLQTLTRSVLSTALPQLM MPSYFSTLSLYIVMAFILYTAYMIRYYDFLTYAEISQNKWYTLAKNGYAPHRMILVKLLM RLSEVIAYYTIGFLATLFLTMFLKYPFVVSYMLPLYICGLIDLIFLSLITMSASLFISRQ RNARYVIIIGAVCIWMLRLQCGYYHLISDRIWMSTPGNLFDLSQCSYLLYFIIMIILCVL VVVFRAKRIAQYTNFPFYERDMDMGEDVNIVVLQEDGYREVEEQYVRRQRRKGMDTLVNL AMVLLITAGVLINVFVLFVSLSSPERETNFFGVIPFVFHTESMEPQIMYNDLAFFDAIDK QEPLHAGHSVLYHEDDGPQVASIKAVKGEKLSVDILKYTDDVKKGAYEKVIARDAVYGRY SGRSRWLGAIILFANTVLGRLILLLIPAFMLYYYKPILAYLKKKGFITE >gi|312956945|gb|AENW01000008.1| GENE 66 76442 - 77419 901 325 aa, chain - ## HITS:1 COG:PH1230 KEGG:ns NR:ns ## COG: PH1230 COG1131 # Protein_GI_number: 14591049 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Pyrococcus horikoshii # 30 233 14 217 253 65 20.0 1e-10 MEQAKKRAQCVLMEHVGSMEYYQSPQQDPKQVFSDINFEALEGEVWAILGTSAFEVRLLL EIIANARPYKDGRCVLAQKGMMRKKRTILPHVYYIGSTNMLFTNMNVLEYLMYITAREQG DAAVRQKRILEKIMELNMGYVALSVIGNLTPSERSVVTLLVSLFTESKLIIWNLARLEYD ERSLQAIAAICEEIRKQKRTLLFSTFDYQLIERCATHIAPLYDGRLLYTGTVEAFVQTWD HLSTIIQDAHITAIRHAIETAHSDYTVLERDQTLYVWDQEQKTDTYHSIWKLLTEHQLHP DSIRRHPLCVENAWKEIRNHHDLQP >gi|312956945|gb|AENW01000008.1| GENE 67 77429 - 77959 587 176 aa, chain - ## HITS:1 COG:BS_sipW KEGG:ns NR:ns ## COG: BS_sipW COG0681 # Protein_GI_number: 16079519 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 40 169 2 132 190 77 36.0 2e-14 MKQDVYTSEAQLQAMLDELEHAHDLDSKAHTRIARRKLFKLIGNLAGVLIIAFLFITWLQ VEDARSRGEVPTVCGYQIYEVKTGSMVPTIPVKSLILSRIPKDAAKLAVGDIVTFQDNGV TITHRIVEVIQEKGAIGYRTKGDNPANSVDPNILTPDRIQAVYVMKLPFRFTSESD >gi|312956945|gb|AENW01000008.1| GENE 68 77979 - 78626 778 215 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKTLFMGALALTIATSMVAGTMAVYTHADTLAGTTNDTVSAKKFYINSTAKNDINIKLA PGNEEFWDFQVTNHKDHIVTEVPMDLKLKVDLKNAAALPDLVCTLYRVDGEKNVALASGT RADGSTTIELEKLGEFAPNVEKDSTYKLGFYWKDTAGSNDALDTAIGSDGAIKDDGQANP GDTLSGISVTVTGTQTTDAAILQSMNQPEYKPANK Prediction of potential genes in microbial genomes Time: Sat May 14 01:44:23 2011 Seq name: gi|312956640|gb|AENW01000009.1| Clostridium sp. HGF2 contig00019, whole genome shotgun sequence Length of sequence - 307198 bp Number of predicted genes - 276, with homology - 238 Number of transcription units - 165, operones - 70 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 6/0.000 - CDS 1192 - 1809 474 ## COG4279 Uncharacterized conserved protein 3 1 Op 3 1/0.125 - CDS 1919 - 3097 966 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4 1 Op 4 . - CDS 3063 - 4076 732 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 5 2 Tu 1 . - CDS 4233 - 4529 216 ## gi|224543399|ref|ZP_03683938.1| hypothetical protein CATMIT_02600 - Prom 4603 - 4662 3.5 - Term 4690 - 4740 8.4 6 3 Op 1 . - CDS 4745 - 5389 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 7 3 Op 2 . - CDS 5416 - 7152 1260 ## - Prom 7322 - 7381 5.4 8 4 Op 1 . - CDS 7576 - 8079 115 ## 9 4 Op 2 . - CDS 8046 - 8657 177 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 10 4 Op 3 . - CDS 8654 - 9457 195 ## 11 4 Op 4 . - CDS 9473 - 9979 118 ## - Term 9994 - 10028 4.6 12 5 Op 1 . - CDS 10035 - 10394 177 ## 13 5 Op 2 . - CDS 10475 - 10597 103 ## - Prom 10619 - 10678 12.3 14 6 Tu 1 . - CDS 10683 - 11975 539 ## gi|160914893|ref|ZP_02077107.1| hypothetical protein EUBDOL_00901 - Prom 11995 - 12054 7.6 - Term 12003 - 12065 5.8 15 7 Op 1 . - CDS 12117 - 13364 1382 ## COG0144 tRNA and rRNA cytosine-C5-methylases 16 7 Op 2 . - CDS 13361 - 14140 662 ## gi|160915467|ref|ZP_02077678.1| hypothetical protein EUBDOL_01475 17 7 Op 3 . - CDS 14151 - 16319 2374 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 16339 - 16398 5.2 - Term 16657 - 16691 1.2 18 8 Tu 1 . - CDS 16700 - 17044 198 ## - Prom 17078 - 17137 5.0 + Prom 16883 - 16942 6.2 19 9 Tu 1 . + CDS 17159 - 17812 575 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 17987 - 18019 2.4 20 10 Op 1 . - CDS 18231 - 19943 1487 ## COG2200 FOG: EAL domain 21 10 Op 2 . - CDS 20019 - 20624 578 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 22 10 Op 3 . - CDS 20624 - 21526 620 ## Elen_0467 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) - Prom 21563 - 21622 3.3 23 11 Tu 1 . - CDS 21973 - 23352 1215 ## COG0534 Na+-driven multidrug efflux pump - Prom 23409 - 23468 7.7 + Prom 23373 - 23432 5.3 24 12 Tu 1 . + CDS 23457 - 24131 723 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 24171 - 24222 4.2 - Term 24157 - 24211 6.2 25 13 Tu 1 . - CDS 24227 - 25378 1429 ## SCO1511 hypothetical protein - Prom 25491 - 25550 7.9 - Term 25871 - 25911 5.8 26 14 Op 1 . - CDS 25921 - 26685 642 ## COG1145 Ferredoxin 27 14 Op 2 . - CDS 26682 - 27047 335 ## COG0640 Predicted transcriptional regulators 28 14 Op 3 . - CDS 27060 - 27833 575 ## COG0778 Nitroreductase - Prom 27858 - 27917 5.6 29 15 Op 1 . - CDS 28424 - 29086 387 ## 30 15 Op 2 . - CDS 29172 - 29510 349 ## gi|295105918|emb|CBL03461.1| hypothetical protein 31 15 Op 3 . - CDS 29507 - 29704 190 ## gi|226325008|ref|ZP_03800526.1| hypothetical protein COPCOM_02800 32 15 Op 4 . - CDS 29701 - 30162 527 ## COG1051 ADP-ribose pyrophosphatase 33 15 Op 5 . - CDS 30217 - 30468 259 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 30491 - 30550 8.3 - Term 30503 - 30545 3.0 34 16 Op 1 . - CDS 30644 - 30796 56 ## 35 16 Op 2 40/0.000 - CDS 30821 - 31336 288 ## COG0642 Signal transduction histidine kinase 36 16 Op 3 . - CDS 31446 - 31850 357 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 31963 - 32022 5.1 37 17 Op 1 . - CDS 32255 - 32701 374 ## Dhaf_2153 GCN5-related N-acetyltransferase 38 17 Op 2 . - CDS 32742 - 33095 394 ## Slin_0809 hypothetical protein 39 17 Op 3 . - CDS 33166 - 33423 146 ## gi|167746531|ref|ZP_02418658.1| hypothetical protein ANACAC_01241 - Prom 33545 - 33604 4.4 - Term 33500 - 33542 -0.7 40 18 Tu 1 . - CDS 33672 - 33941 178 ## gi|167746531|ref|ZP_02418658.1| hypothetical protein ANACAC_01241 41 19 Op 1 . - CDS 34665 - 35108 343 ## COG3871 Uncharacterized stress protein (general stress protein 26) 42 19 Op 2 . - CDS 35181 - 35537 445 ## COG1733 Predicted transcriptional regulators 43 19 Op 3 . - CDS 35598 - 35924 192 ## Cphy_3251 hypothetical protein 44 19 Op 4 . - CDS 35950 - 36129 107 ## - Prom 36242 - 36301 2.0 45 20 Tu 1 . - CDS 36447 - 36890 376 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 36910 - 36969 4.1 46 21 Op 1 . + CDS 37184 - 37561 154 ## gi|291563848|emb|CBL42664.1| Predicted transcriptional regulator with C-terminal CBS domains 47 21 Op 2 . + CDS 37576 - 37944 218 ## CDR20291_1745 hypothetical protein + Term 37965 - 38004 6.2 + Prom 38255 - 38314 7.5 48 22 Op 1 . + CDS 38361 - 39701 753 ## COG1373 Predicted ATPase (AAA+ superfamily) 49 22 Op 2 . + CDS 39756 - 42626 108 ## PMI3143 DNA modification methyltransferase 50 22 Op 3 . + CDS 42626 - 44977 222 ## PMI3141 restriction endonuclease + Prom 44997 - 45056 4.2 51 23 Op 1 . + CDS 45086 - 47038 616 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family 52 23 Op 2 . + CDS 47053 - 48798 369 ## Tgr7_2850 hypothetical protein + Term 48815 - 48859 13.2 + Prom 49587 - 49646 8.7 53 24 Op 1 . + CDS 49815 - 49997 57 ## 54 24 Op 2 . + CDS 50019 - 51827 1097 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Term 51714 - 51756 2.6 55 25 Tu 1 . - CDS 51849 - 52529 519 ## mru_1007 diaminohydroxyphosphoribosylaminopyrimidine reductase RibD (EC:1.1.1.-) - Prom 52714 - 52773 6.6 - Term 53204 - 53242 6.0 56 26 Tu 1 . - CDS 53280 - 53771 280 ## - Prom 53808 - 53867 2.4 57 27 Op 1 1/0.125 - CDS 53885 - 54679 916 ## COG0726 Predicted xylanase/chitin deacetylase 58 27 Op 2 . - CDS 54686 - 56056 1428 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 56078 - 56137 5.6 + Prom 56369 - 56428 4.2 59 28 Tu 1 . + CDS 56462 - 57976 1706 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 58051 - 58109 9.2 60 29 Tu 1 . - CDS 58312 - 59220 1022 ## COG3965 Predicted Co/Zn/Cd cation transporters - Prom 59352 - 59411 4.1 + Prom 59394 - 59453 4.6 61 30 Tu 1 . + CDS 59473 - 61404 1884 ## COG0171 NAD synthase + Term 61473 - 61520 -0.6 - Term 61460 - 61508 8.0 62 31 Tu 1 . - CDS 61534 - 63756 2371 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 63801 - 63860 11.1 - Term 64116 - 64150 -0.7 63 32 Op 1 . - CDS 64234 - 65973 1759 ## Haur_2253 hypothetical protein 64 32 Op 2 . - CDS 65963 - 66634 962 ## DSY1217 hypothetical protein 65 32 Op 3 . - CDS 66616 - 67320 687 ## SGO_0092 hypothetical protein - Prom 67445 - 67504 4.8 + Prom 67375 - 67434 7.1 66 33 Tu 1 . + CDS 67455 - 68567 1090 ## COG1454 Alcohol dehydrogenase, class IV - Term 68849 - 68904 10.8 67 34 Op 1 . - CDS 69050 - 69649 569 ## gi|167757196|ref|ZP_02429323.1| hypothetical protein CLORAM_02746 68 34 Op 2 . - CDS 69646 - 69921 279 ## - Prom 70134 - 70193 5.5 + Prom 70105 - 70164 5.1 69 35 Tu 1 . + CDS 70207 - 70923 808 ## COG1342 Predicted DNA-binding proteins + Prom 71049 - 71108 2.8 70 36 Tu 1 . + CDS 71349 - 71528 129 ## - Term 71531 - 71583 5.3 71 37 Op 1 . - CDS 71588 - 71794 280 ## 72 37 Op 2 . - CDS 71836 - 72393 339 ## CD0628 hypothetical protein 73 37 Op 3 . - CDS 72390 - 72572 97 ## 74 37 Op 4 . - CDS 72636 - 73400 595 ## Bmur_0415 4Fe-4S ferredoxin iron-sulfur binding domain protein - Prom 73496 - 73555 5.2 + Prom 73569 - 73628 3.6 75 38 Tu 1 . + CDS 73749 - 74057 506 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Term 74724 - 74762 3.1 76 39 Op 1 . - CDS 74856 - 75368 165 ## Sterm_2242 hypothetical protein 77 39 Op 2 . - CDS 75413 - 76036 441 ## Cbei_3616 XRE family transcriptional regulator - Prom 76092 - 76151 6.3 - Term 76462 - 76497 -1.0 78 40 Tu 1 . - CDS 76526 - 77308 660 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family - Prom 77362 - 77421 5.8 + Prom 77405 - 77464 8.4 79 41 Op 1 . + CDS 77504 - 77824 276 ## Shel_05260 hypothetical protein 80 41 Op 2 . + CDS 77818 - 78036 264 ## COG1476 Predicted transcriptional regulators + Term 78217 - 78268 -0.7 + Prom 78218 - 78277 12.4 81 42 Op 1 1/0.125 + CDS 78353 - 79012 529 ## COG1309 Transcriptional regulator 82 42 Op 2 . + CDS 79005 - 79697 257 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 79700 - 79740 0.4 83 43 Tu 1 . - CDS 79721 - 79993 378 ## Cphy_1648 hypothetical protein - Prom 80115 - 80174 1.8 84 44 Op 1 . - CDS 80221 - 81129 1155 ## COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes - Prom 81154 - 81213 7.5 - Term 81192 - 81216 -1.0 85 44 Op 2 17/0.000 - CDS 81219 - 82805 1884 ## COG1178 ABC-type Fe3+ transport system, permease component 86 44 Op 3 7/0.000 - CDS 82795 - 83580 409 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 87 44 Op 4 . - CDS 83568 - 84545 1362 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 84627 - 84686 6.0 + Prom 84584 - 84643 4.6 88 45 Tu 1 . + CDS 84730 - 85329 788 ## gi|160915460|ref|ZP_02077671.1| hypothetical protein EUBDOL_01468 + Term 85404 - 85457 3.4 - Term 85392 - 85444 6.4 89 46 Op 1 . - CDS 85488 - 86201 663 ## COG1213 Predicted sugar nucleotidyltransferases 90 46 Op 2 . - CDS 86198 - 87253 1058 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase - Prom 87336 - 87395 6.3 + TRNA 88023 - 88096 72.6 # Cys GCA 0 0 + TRNA 88105 - 88192 70.5 # Leu TAA 0 0 91 47 Tu 1 . + CDS 88502 - 89605 841 ## EUBELI_01577 hypothetical protein - Term 89632 - 89686 7.1 92 48 Tu 1 . - CDS 89708 - 90778 696 ## COG1408 Predicted phosphohydrolases - Prom 90864 - 90923 10.0 + Prom 90843 - 90902 10.3 93 49 Op 1 4/0.031 + CDS 91013 - 92149 1082 ## COG1180 Pyruvate-formate lyase-activating enzyme 94 49 Op 2 . + CDS 92168 - 94546 2069 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 94555 - 94597 7.3 95 50 Tu 1 . - CDS 96284 - 96967 495 ## Aflv_2429 hypothetical protein - Prom 97017 - 97076 5.1 - Term 96985 - 97030 -0.2 96 51 Op 1 17/0.000 - CDS 97083 - 97760 912 ## COG0569 K+ transport systems, NAD-binding component 97 51 Op 2 . - CDS 97773 - 99170 1427 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 99237 - 99296 7.5 - Term 99362 - 99398 3.3 98 52 Tu 1 . - CDS 99415 - 99951 684 ## COG1592 Rubrerythrin - Prom 100065 - 100124 7.4 + Prom 100169 - 100228 9.8 99 53 Tu 1 . + CDS 100287 - 102380 2234 ## COG3968 Uncharacterized protein related to glutamine synthetase + Term 102387 - 102421 5.1 + Prom 102399 - 102458 8.2 100 54 Tu 1 . + CDS 102604 - 104277 1984 ## COG1283 Na+/phosphate symporter + Prom 104872 - 104931 5.7 101 55 Tu 1 . + CDS 105081 - 106748 1801 ## COG1283 Na+/phosphate symporter + Term 106749 - 106776 0.1 + Prom 106899 - 106958 4.3 102 56 Op 1 . + CDS 107029 - 107502 527 ## gi|293402295|ref|ZP_06646433.1| conserved hypothetical protein 103 56 Op 2 . + CDS 107438 - 107914 408 ## COG1578 Uncharacterized conserved protein + Term 107999 - 108045 -0.3 - Term 107985 - 108031 -0.3 104 57 Op 1 . - CDS 108108 - 108632 179 ## PROTEIN SUPPORTED gi|237672173|ref|ZP_04532143.1| acetyltransferase, ribosomal protein N-acetylase 105 57 Op 2 . - CDS 108688 - 109905 1543 ## COG0628 Predicted permease 106 57 Op 3 . - CDS 109960 - 111609 1953 ## COG0171 NAD synthase - Prom 111792 - 111851 6.8 + Prom 111651 - 111710 4.5 107 58 Tu 1 . + CDS 111733 - 112464 845 ## COG0566 rRNA methylases + Term 112474 - 112508 4.0 108 59 Op 1 . - CDS 112631 - 113371 782 ## COG2365 Protein tyrosine/serine phosphatase 109 59 Op 2 . - CDS 113368 - 113694 323 ## COG0607 Rhodanese-related sulfurtransferase 110 59 Op 3 . - CDS 113704 - 114048 523 ## gi|293401584|ref|ZP_06645726.1| putative amino acid permease 111 59 Op 4 . - CDS 114050 - 114487 594 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 114507 - 114566 4.9 112 60 Tu 1 . - CDS 114639 - 115604 1157 ## gi|293401586|ref|ZP_06645728.1| hypothetical protein HMPREF0863_01868 - Prom 115624 - 115683 4.7 + Prom 115793 - 115852 5.3 113 61 Tu 1 . + CDS 115883 - 116743 1099 ## Clos_2610 hypothetical protein + Term 116750 - 116796 11.0 - Term 116955 - 117006 2.5 114 62 Op 1 . - CDS 117022 - 117723 963 ## COG0670 Integral membrane protein, interacts with FtsH 115 62 Op 2 . - CDS 117800 - 118552 906 ## COG0860 N-acetylmuramoyl-L-alanine amidase 116 62 Op 3 . - CDS 118567 - 119394 1058 ## gi|293401592|ref|ZP_06645734.1| conserved hypothetical protein 117 63 Op 1 . - CDS 119846 - 120313 397 ## COG1671 Uncharacterized protein conserved in bacteria 118 63 Op 2 . - CDS 120285 - 121484 1612 ## COG1171 Threonine dehydratase - Prom 121559 - 121618 5.7 - Term 121742 - 121781 5.1 119 64 Tu 1 . - CDS 121792 - 123492 1942 ## CLM_1301 hypothetical protein - Prom 123551 - 123610 10.4 - Term 123950 - 123980 -0.4 120 65 Tu 1 . - CDS 124024 - 125718 2297 ## COG0442 Prolyl-tRNA synthetase 121 66 Op 1 13/0.000 - CDS 125812 - 127041 1280 ## COG0826 Collagenase and related proteases 122 66 Op 2 . - CDS 127050 - 127943 1209 ## COG0826 Collagenase and related proteases - Prom 128165 - 128224 6.9 - TRNA 128456 - 128531 80.7 # Glu TTC 0 0 - Term 128625 - 128674 3.1 123 67 Tu 1 . - CDS 128818 - 130215 1797 ## gi|293402059|ref|ZP_06646198.1| high mobility group box protein 1 - Prom 130258 - 130317 6.2 + Prom 130418 - 130477 6.3 124 68 Tu 1 . + CDS 130529 - 131824 1257 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 131872 - 131923 5.0 - Term 131854 - 131915 11.5 125 69 Op 1 7/0.000 - CDS 132106 - 133578 1496 ## COG1640 4-alpha-glucanotransferase 126 69 Op 2 . - CDS 133587 - 135845 2612 ## COG0058 Glucan phosphorylase - Prom 135885 - 135944 6.5 - Term 135916 - 135972 -0.8 127 70 Tu 1 . - CDS 136029 - 136640 571 ## COG1309 Transcriptional regulator - Prom 136734 - 136793 5.5 + Prom 136775 - 136834 5.4 128 71 Tu 1 . + CDS 136939 - 138855 2129 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 138867 - 138908 6.3 - Term 138855 - 138896 7.1 129 72 Tu 1 . - CDS 138936 - 139733 1168 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 139763 - 139822 4.4 + Prom 139722 - 139781 6.3 130 73 Tu 1 . + CDS 139912 - 140103 78 ## - Term 140035 - 140072 -1.0 131 74 Op 1 . - CDS 140073 - 140570 647 ## gi|293402064|ref|ZP_06646203.1| hypothetical protein HMPREF0863_02344 - Prom 140592 - 140651 4.5 132 74 Op 2 . - CDS 140654 - 141328 575 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 141451 - 141510 4.5 + Prom 141382 - 141441 7.3 133 75 Tu 1 . + CDS 141461 - 141964 575 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Term 142450 - 142480 0.3 134 76 Op 1 . - CDS 142490 - 142723 343 ## gi|293402067|ref|ZP_06646206.1| hypothetical protein HMPREF0863_02347 135 76 Op 2 . - CDS 142784 - 143791 1119 ## - Prom 143877 - 143936 7.0 136 77 Op 1 . + CDS 144188 - 144751 770 ## gi|293402069|ref|ZP_06646208.1| hypothetical protein HMPREF0863_02349 + Term 144753 - 144778 -0.5 137 77 Op 2 . + CDS 144793 - 145080 248 ## + Prom 145083 - 145142 4.8 138 77 Op 3 . + CDS 145163 - 146527 1695 ## COG0114 Fumarase + Term 146652 - 146692 9.4 - Term 146699 - 146741 -0.5 139 78 Tu 1 . - CDS 146897 - 148069 1398 ## COG0281 Malic enzyme - Prom 148095 - 148154 4.8 + Prom 148131 - 148190 5.0 140 79 Tu 1 . + CDS 148250 - 149134 765 ## Pecwa_4583 metallophosphoesterase + Term 149205 - 149243 1.2 141 80 Op 1 . - CDS 149094 - 149309 256 ## - Term 149360 - 149395 3.1 142 80 Op 2 . - CDS 149399 - 149929 565 ## Elen_1942 hypothetical protein - Prom 149975 - 150034 7.5 143 81 Op 1 . - CDS 150042 - 150203 65 ## 144 81 Op 2 . - CDS 150253 - 151248 1098 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 151480 - 151539 79.3 + TRNA 151463 - 151538 80.7 # Glu TTC 0 0 + Prom 151864 - 151923 6.7 145 82 Tu 1 . + CDS 151961 - 152320 258 ## + Prom 152453 - 152512 4.0 146 83 Op 1 . + CDS 152536 - 153738 676 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 147 83 Op 2 . + CDS 153779 - 154537 262 ## gi|256753343|ref|ZP_05494137.1| Abortive infection protein + Term 154592 - 154648 3.2 - Term 154493 - 154530 -0.8 148 84 Op 1 . - CDS 154640 - 154855 204 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 149 84 Op 2 . - CDS 154866 - 155411 367 ## 150 84 Op 3 . - CDS 155448 - 156023 466 ## - Prom 156097 - 156156 8.1 + Prom 156142 - 156201 8.5 151 85 Tu 1 . + CDS 156373 - 156624 375 ## Cphy_1340 hypothetical protein + Term 156638 - 156680 8.4 + TRNA 156760 - 156835 90.1 # Asn GTT 0 0 - Term 156747 - 156815 31.2 152 86 Op 1 . - CDS 156829 - 158028 543 ## COG0582 Integrase 153 86 Op 2 . - CDS 158052 - 158924 183 ## SZO_02250 hypothetical protein - Prom 159168 - 159227 4.9 + Prom 159416 - 159475 6.0 154 87 Tu 1 . + CDS 159560 - 160102 213 ## + Term 160108 - 160174 11.5 155 88 Tu 1 . + CDS 160458 - 161204 233 ## gi|257082277|ref|ZP_05576638.1| predicted protein + Term 161228 - 161266 3.1 156 89 Tu 1 . - CDS 161899 - 163932 2199 ## COG0210 Superfamily I DNA and RNA helicases - Prom 163980 - 164039 3.7 157 90 Tu 1 . - CDS 164112 - 164699 788 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 164779 - 164838 7.5 + Prom 164779 - 164838 5.7 158 91 Tu 1 . + CDS 164863 - 165738 1242 ## COG2035 Predicted membrane protein + Term 165748 - 165777 0.5 + Prom 165756 - 165815 9.6 159 92 Op 1 . + CDS 165847 - 166605 796 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 160 92 Op 2 . + CDS 166589 - 167320 541 ## gi|225568894|ref|ZP_03777919.1| hypothetical protein CLOHYLEM_04973 - Term 167295 - 167347 3.2 161 93 Tu 1 . - CDS 167531 - 167929 501 ## Cbei_2571 hypothetical protein - Prom 168006 - 168065 8.5 + Prom 168034 - 168093 5.2 162 94 Tu 1 . + CDS 168121 - 168546 286 ## Cbei_2187 hypothetical protein + Term 168578 - 168629 7.5 - Term 168625 - 168667 1.1 163 95 Op 1 8/0.000 - CDS 168733 - 169590 997 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 164 95 Op 2 9/0.000 - CDS 169590 - 170378 892 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 165 95 Op 3 15/0.000 - CDS 170375 - 171163 279 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 171194 - 171253 4.5 - Term 171349 - 171403 2.2 166 95 Op 4 1/0.125 - CDS 171456 - 172442 1180 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component - Prom 172487 - 172546 4.9 167 96 Tu 1 . - CDS 172559 - 173263 750 ## COG2188 Transcriptional regulators - Prom 173305 - 173364 7.2 - Term 173424 - 173471 8.5 168 97 Op 1 . - CDS 173499 - 173927 356 ## 169 97 Op 2 9/0.000 - CDS 173939 - 175159 1483 ## COG1668 ABC-type Na+ efflux pump, permease component 170 97 Op 3 . - CDS 175156 - 176073 1377 ## COG4152 ABC-type uncharacterized transport system, ATPase component - Prom 176093 - 176152 8.2 + Prom 176099 - 176158 10.0 171 98 Op 1 . + CDS 176233 - 176448 396 ## COG1476 Predicted transcriptional regulators 172 98 Op 2 . + CDS 176450 - 177340 842 ## gi|293402419|ref|ZP_06646555.1| hypothetical protein HMPREF0863_02696 + Term 177433 - 177481 0.0 - Term 177376 - 177419 -0.7 173 99 Tu 1 . - CDS 177462 - 178784 1037 ## CPE0820 hypothetical protein - Prom 178814 - 178873 7.0 174 100 Tu 1 . - CDS 178984 - 179100 72 ## - Prom 179154 - 179213 4.2 - Term 179334 - 179371 6.2 175 101 Tu 1 . - CDS 179397 - 181988 3155 ## COG0474 Cation transport ATPase - Prom 182049 - 182108 7.3 176 102 Tu 1 . + CDS 182326 - 184368 1961 ## COG2199 FOG: GGDEF domain + Term 184414 - 184452 1.6 - Term 184587 - 184648 -0.0 177 103 Tu 1 . - CDS 184660 - 186294 1915 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 186319 - 186378 4.5 + Prom 186386 - 186445 6.2 178 104 Tu 1 . + CDS 186468 - 186887 307 ## - Term 186901 - 186957 1.4 179 105 Op 1 . - CDS 187013 - 188218 1105 ## Dhaf_0966 transcriptional regulator, XRE family 180 105 Op 2 . - CDS 188298 - 189047 956 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 189069 - 189128 4.4 181 106 Op 1 . - CDS 189159 - 190370 1202 ## COG0628 Predicted permease - Term 190386 - 190418 2.0 182 106 Op 2 . - CDS 190432 - 193938 3218 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 194055 - 194114 5.1 - Term 194101 - 194141 5.1 183 107 Op 1 . - CDS 194147 - 201436 8137 ## gi|293401895|ref|ZP_06646035.1| hypothetical protein HMPREF0863_02175 - Prom 201464 - 201523 4.5 184 107 Op 2 . - CDS 201529 - 201663 189 ## 185 107 Op 3 . - CDS 201696 - 202502 922 ## gi|293401896|ref|ZP_06646036.1| hypothetical protein HMPREF0863_02176 - Prom 202547 - 202606 2.5 - Term 202663 - 202699 2.4 186 108 Op 1 . - CDS 202745 - 203209 310 ## EUBREC_0102 hypothetical protein - Term 203215 - 203260 2.4 187 108 Op 2 . - CDS 203289 - 203948 306 ## Lebu_1380 protein of unknown function DUF1703 188 108 Op 3 . - CDS 203900 - 204208 114 ## gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 - Term 204801 - 204838 -0.3 189 109 Op 1 . - CDS 204915 - 207257 375 ## EUBREC_1883 hypothetical protein 190 109 Op 2 . - CDS 207263 - 208114 491 ## COG1131 ABC-type multidrug transport system, ATPase component 191 109 Op 3 . - CDS 208126 - 208896 438 ## 192 109 Op 4 . - CDS 208985 - 209305 194 ## - Prom 209346 - 209405 3.9 193 110 Tu 1 . - CDS 209432 - 209893 394 ## gi|293401898|ref|ZP_06646038.1| conserved hypothetical protein - Prom 209931 - 209990 12.8 + Prom 209872 - 209931 6.5 194 111 Tu 1 . + CDS 210040 - 210924 812 ## COG0668 Small-conductance mechanosensitive channel + Term 210939 - 210985 6.1 - Term 210924 - 210973 3.0 195 112 Tu 1 . - CDS 210974 - 212731 1986 ## COG0513 Superfamily II DNA and RNA helicases - Prom 212826 - 212885 7.2 - Term 212855 - 212899 5.2 196 113 Tu 1 . - CDS 212902 - 213369 506 ## gi|293402639|ref|ZP_06646739.1| hypothetical protein HMPREF0863_02883 - Prom 213539 - 213598 5.9 + Prom 214068 - 214127 10.5 197 114 Tu 1 . + CDS 214260 - 214460 282 ## COG1278 Cold shock proteins + Term 214475 - 214512 5.5 - Term 214614 - 214648 6.0 198 115 Tu 1 . - CDS 214782 - 215198 503 ## gi|160915729|ref|ZP_02077937.1| hypothetical protein EUBDOL_01738 - Prom 215277 - 215336 6.0 - Term 215784 - 215833 12.4 199 116 Tu 1 . - CDS 215836 - 217149 1185 ## COG0477 Permeases of the major facilitator superfamily - Term 217883 - 217940 10.8 200 117 Tu 1 . - CDS 218101 - 218826 802 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump - Prom 218846 - 218905 2.8 - Term 219023 - 219077 10.6 201 118 Op 1 2/0.031 - CDS 219124 - 219432 484 ## COG0526 Thiol-disulfide isomerase and thioredoxins 202 118 Op 2 . - CDS 219495 - 220370 1330 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 220391 - 220450 7.1 + Prom 220306 - 220365 4.5 203 119 Tu 1 . + CDS 220485 - 220967 575 ## COG2606 Uncharacterized conserved protein + Term 220969 - 221001 4.0 - Term 220809 - 220851 -1.0 204 120 Tu 1 . - CDS 221012 - 221869 1124 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 221892 - 221951 5.6 - Term 221954 - 221995 7.2 205 121 Tu 1 . - CDS 222003 - 222725 933 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 222751 - 222810 6.4 206 122 Tu 1 . - CDS 222922 - 223842 1111 ## COG4989 Predicted oxidoreductase - Prom 223869 - 223928 3.9 - Term 224193 - 224232 -0.8 207 123 Op 1 1/0.125 - CDS 224291 - 225154 952 ## COG2017 Galactose mutarotase and related enzymes 208 123 Op 2 . - CDS 225234 - 226019 704 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 226042 - 226101 8.8 - Term 227055 - 227085 3.6 209 124 Tu 1 . - CDS 227104 - 228243 1356 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Prom 228379 - 228438 7.3 + Prom 228366 - 228425 5.8 210 125 Tu 1 . + CDS 228447 - 229646 1422 ## COG0426 Uncharacterized flavoproteins + Term 229686 - 229719 1.0 - Term 229731 - 229784 -0.6 211 126 Tu 1 . - CDS 229859 - 230755 783 ## COG0789 Predicted transcriptional regulators - Prom 230934 - 230993 4.0 212 127 Op 1 . - CDS 231150 - 231767 646 ## COG1525 Micrococcal nuclease (thermonuclease) homologs 213 127 Op 2 . - CDS 231813 - 232088 189 ## 214 127 Op 3 3/0.031 - CDS 232085 - 232891 722 ## COG1396 Predicted transcriptional regulators 215 127 Op 4 . - CDS 232963 - 234027 916 ## COG0500 SAM-dependent methyltransferases - Prom 234075 - 234134 2.6 - Term 234093 - 234129 -0.3 216 128 Op 1 41/0.000 - CDS 234181 - 235101 1109 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 217 128 Op 2 . - CDS 235111 - 235815 201 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 218 128 Op 3 . - CDS 235817 - 236017 67 ## - Prom 236194 - 236253 3.3 219 129 Tu 1 . - CDS 236441 - 237361 1133 ## Dhaf_2679 hypothetical protein - Prom 237382 - 237441 6.2 - Term 237730 - 237770 3.4 220 130 Op 1 9/0.000 - CDS 237843 - 239201 1789 ## COG2848 Uncharacterized conserved protein 221 130 Op 2 . - CDS 239214 - 239483 388 ## COG3830 ACT domain-containing protein - Prom 239506 - 239565 9.5 - Term 239525 - 239586 1.9 222 131 Op 1 . - CDS 239588 - 240103 586 ## gi|293401925|ref|ZP_06646065.1| hypothetical protein HMPREF0863_02206 223 131 Op 2 10/0.000 - CDS 240132 - 241253 1303 ## COG0642 Signal transduction histidine kinase 224 131 Op 3 40/0.000 - CDS 241250 - 242350 1142 ## COG0642 Signal transduction histidine kinase 225 131 Op 4 . - CDS 242340 - 243029 905 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 243131 - 243190 4.8 + Prom 243094 - 243153 4.0 226 132 Tu 1 . + CDS 243179 - 244186 965 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 244187 - 244233 4.6 - Term 244548 - 244603 10.0 227 133 Op 1 12/0.000 - CDS 244615 - 245544 1268 ## COG3958 Transketolase, C-terminal subunit 228 133 Op 2 . - CDS 245544 - 246371 880 ## COG3959 Transketolase, N-terminal subunit - Prom 246440 - 246499 6.2 229 134 Tu 1 . - CDS 246544 - 248691 1653 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein - Prom 248884 - 248943 4.0 + Prom 248995 - 249054 4.5 230 135 Tu 1 . + CDS 249074 - 249709 570 ## COG1357 Uncharacterized low-complexity proteins + Term 249710 - 249741 -0.8 - Term 250051 - 250098 1.0 231 136 Tu 1 . - CDS 250112 - 251038 506 ## COG0675 Transposase and inactivated derivatives - Prom 251210 - 251269 5.5 + Prom 251063 - 251122 3.1 232 137 Tu 1 . + CDS 251159 - 251383 69 ## - Term 251790 - 251844 1.1 233 138 Op 1 . - CDS 251972 - 253195 1532 ## COG2195 Di- and tripeptidases 234 138 Op 2 . - CDS 253257 - 253703 588 ## CLM_1840 hypothetical protein - Prom 253860 - 253919 5.5 - TRNA 254077 - 254150 76.3 # Gly TCC 0 0 - TRNA 254161 - 254236 92.8 # Lys TTT 0 0 - TRNA 254257 - 254332 71.9 # Gln TTG 0 0 - TRNA 254342 - 254425 73.3 # Tyr GTA 0 0 - TRNA 254443 - 254518 93.8 # Thr TGT 0 0 - TRNA 254528 - 254603 99.0 # Val TAC 0 0 235 139 Tu 1 . - CDS 254827 - 255111 366 ## gi|293401939|ref|ZP_06646079.1| conserved hypothetical protein - Prom 255136 - 255195 4.1 - Term 255187 - 255226 6.6 236 140 Op 1 . - CDS 255231 - 255665 537 ## COG1733 Predicted transcriptional regulators 237 140 Op 2 13/0.000 - CDS 255709 - 256935 1190 ## COG0785 Cytochrome c biogenesis protein 238 140 Op 3 . - CDS 256945 - 257259 616 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 257285 - 257344 1.9 239 141 Tu 1 . - CDS 257397 - 258647 423 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 258750 - 258809 2.3 - Term 259032 - 259089 2.2 240 142 Op 1 . - CDS 259256 - 259840 191 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 241 142 Op 2 . - CDS 259849 - 261273 1717 ## COG0232 dGTP triphosphohydrolase - Prom 261485 - 261544 3.4 242 143 Tu 1 . - CDS 261863 - 264463 2757 ## COG0480 Translation elongation factors (GTPases) - Prom 264527 - 264586 6.2 243 144 Tu 1 . - CDS 264981 - 266333 1395 ## COG0534 Na+-driven multidrug efflux pump - Prom 266363 - 266422 4.9 244 145 Tu 1 . - CDS 266472 - 267032 325 ## gi|164688271|ref|ZP_02212299.1| hypothetical protein CLOBAR_01916 - Prom 267065 - 267124 3.2 245 146 Op 1 . - CDS 267172 - 267879 557 ## BHWA1_00415 hypothetical protein 246 146 Op 2 . - CDS 267881 - 268510 693 ## COG1309 Transcriptional regulator - Prom 268548 - 268607 5.4 247 147 Tu 1 . - CDS 268809 - 270227 1589 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase - Prom 270272 - 270331 8.5 - Term 270645 - 270675 -0.4 248 148 Op 1 35/0.000 - CDS 270863 - 272656 236 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 249 148 Op 2 . - CDS 272628 - 274439 206 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 - Prom 274473 - 274532 2.7 - Term 274480 - 274520 3.2 250 149 Op 1 9/0.000 - CDS 274628 - 275599 1003 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 251 149 Op 2 . - CDS 275587 - 276276 757 ## COG3279 Response regulator of the LytR/AlgR family - Prom 276401 - 276460 5.1 252 150 Tu 1 . - CDS 276487 - 277044 518 ## COG1309 Transcriptional regulator - Prom 277225 - 277284 3.3 + Prom 277498 - 277557 2.9 253 151 Op 1 36/0.000 + CDS 277598 - 278311 280 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 254 151 Op 2 . + CDS 278316 - 280796 2502 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Term 281386 - 281417 0.1 255 152 Op 1 . - CDS 281435 - 281824 194 ## COG1598 Uncharacterized conserved protein 256 152 Op 2 . - CDS 281882 - 282070 138 ## MGAS9429_Spy0565 phage protein - Prom 282131 - 282190 4.5 257 153 Tu 1 . - CDS 283101 - 283853 526 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 283964 - 284023 4.6 258 154 Tu 1 . - CDS 284165 - 284461 306 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase - Prom 284643 - 284702 3.3 - Term 285015 - 285044 -0.2 259 155 Op 1 1/0.125 - CDS 285226 - 286314 737 ## COG1061 DNA or RNA helicases of superfamily II 260 155 Op 2 . - CDS 286283 - 287590 738 ## COG1061 DNA or RNA helicases of superfamily II - Prom 287669 - 287728 2.9 261 156 Op 1 . - CDS 287734 - 287991 171 ## - Prom 288072 - 288131 3.0 262 156 Op 2 . - CDS 288164 - 289636 751 ## - Prom 289722 - 289781 9.0 + Prom 289839 - 289898 9.8 263 157 Op 1 . + CDS 290056 - 290877 357 ## COG0789 Predicted transcriptional regulators + Term 290889 - 290928 4.2 264 157 Op 2 . + CDS 290950 - 291429 465 ## COG1720 Uncharacterized conserved protein + Term 291590 - 291624 2.4 265 158 Tu 1 . - CDS 291975 - 296195 940 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 296279 - 296338 6.9 266 159 Tu 1 . - CDS 296498 - 296785 202 ## gi|169350762|ref|ZP_02867700.1| hypothetical protein CLOSPI_01535 - Prom 296848 - 296907 7.6 267 160 Tu 1 . - CDS 297180 - 297443 105 ## - Prom 297492 - 297551 5.0 + Prom 297617 - 297676 2.1 268 161 Tu 1 . + CDS 297778 - 297993 169 ## + Term 298040 - 298069 -0.3 269 162 Op 1 . - CDS 298360 - 299451 202 ## DSY0720 hypothetical protein 270 162 Op 2 . - CDS 299448 - 300377 291 ## SAOUHSC_00164 hypothetical protein 271 162 Op 3 . - CDS 300378 - 301238 276 ## DSY0719 hypothetical protein 272 162 Op 4 . - CDS 301270 - 301488 190 ## gi|167760896|ref|ZP_02433023.1| hypothetical protein CLOSCI_03284 - Prom 301508 - 301567 6.4 273 163 Tu 1 . - CDS 302122 - 303663 1524 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Prom 303722 - 303781 5.5 - Term 303675 - 303719 6.7 274 164 Tu 1 . - CDS 303786 - 305099 1349 ## COG2252 Permeases - Prom 305265 - 305324 5.5 - Term 305140 - 305174 1.2 275 165 Op 1 . - CDS 305340 - 305942 591 ## COG3340 Peptidase E 276 165 Op 2 . - CDS 305939 - 307108 921 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 307137 - 307196 7.7 Predicted protein(s) >gi|312956640|gb|AENW01000009.1| GENE 1 304 - 1158 654 284 aa, chain - ## HITS:1 COG:no KEGG:Bmur_2162 NR:ns ## KEGG: Bmur_2162 # Name: not_defined # Def: hypothetical protein # Organism: B.murdochii # Pathway: not_defined # 8 278 23 292 292 205 36.0 1e-51 MDAFMGKYAGVYYIKLLLKEPVESRALAIRERLLKRFNEVDDVIEQEGMYSYALCNHKVT YKDDVKVPSQLFITQMIAFDKTTIPELVLQQCWSCENVEELLKDCQYEIMFSDFMASGLP VRERCEILAAFADIMMEVYPEAVAMYWPHAGKIVPRADWLNSSWSNPALHFLDGGVNVRL FNIAESSEKIVDTTGLTAIGLCDLQCHFHNLDIDFIIRYMFNFTSYLYAQGEDIIKDGDT MDGRNSQERWRCQHEDALVSPSRVVIDVNPGEFGAGKRVEQMEA >gi|312956640|gb|AENW01000009.1| GENE 2 1192 - 1809 474 205 aa, chain - ## HITS:1 COG:all4155 KEGG:ns NR:ns ## COG: all4155 COG4279 # Protein_GI_number: 17231647 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 15 171 13 170 278 128 38.0 6e-30 MEPVTIEGRAITVSWWGKAWCENLEKYADFASRLERGKRYVRTGTVIDLQIRAGRIQARV QGRRKAPYKVEIHISPLKEEDCQRIMQACANQIENLEALLSGEFPQSLQELFTGESGLFP SPREISFQCSCPDWAIMCKHVAAVLYGVGNRLDENPFLFFTLRGIDLAKFIDIAIGNKVE MMLEHANEKSARIMDNAAIHDVFGL >gi|312956640|gb|AENW01000009.1| GENE 3 1919 - 3097 966 392 aa, chain - ## HITS:1 COG:MA0189 KEGG:ns NR:ns ## COG: MA0189 COG0553 # Protein_GI_number: 20089087 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Methanosarcina acetivorans str.C2A # 25 389 702 1071 1078 360 51.0 2e-99 MDFHILHGKTSDKLSMDYADLRVFLTITTYGMAAKLSCLKDEEWDCIILDEAQAIKNPLT KQTRALKELKGAMRIAMTGTPIENDLSNLWSLFDFLNKGLLGTATEFKAFVKRLEEHPEG YQKLKAMIAPFMLRRLKTDKTIISDPPEKLESDEYVTLSKQQVVLYRKLIADMEEKIKES EGMERRGLVLSTITKLKQICNHPDQYLGEESYRIKDSGKLEMLKEICETIYEKRERVLVF TQYKEIIPYLHATLAKIFHQEGYILHGGTPVKKRSEIVAAFQQEAYVPYIVLSLKAAGTG LNLTAANHVIHFDRWWNPAVENQATDRAFRIGQKKNVIVHKLISKGTVEEKIDELIKSKV ELSQQVIGDGKETWITEMNNEELMNLLRLDAR >gi|312956640|gb|AENW01000009.1| GENE 4 3063 - 4076 732 337 aa, chain - ## HITS:1 COG:MA0189 KEGG:ns NR:ns ## COG: MA0189 COG0553 # Protein_GI_number: 20089087 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Methanosarcina acetivorans str.C2A # 85 322 408 673 1078 114 29.0 3e-25 MAERIFFHLVESKDEEYPFAFLATYATKDQEGRIRHMPLRYALEEFKQERDRLLTLLSCL NKAAKTCDLLDSFIAHGELFHPLRLQTQEAYEILKHTEEIEACGILCRIPNWWRKKYASV SVTMKMGEKKPSLLGFDSLLSIQPEFSVDGVALTKEDIDQLLLQSEGLAFLKGKWVEVNH KKLQALLKQMENSENESITLMEALRTNLKEEEQAEDDISICNGEWLQSFLQSLHKPAEHQ SDHVPATLQAVLRPYQKAGYSWLRQMQQVHFGACLADDMGLGKTLQVLSFLEELRLEKPD SKVLLIVPASLLGNWSSEGKHFLYTKDGFSYIAWQNK >gi|312956640|gb|AENW01000009.1| GENE 5 4233 - 4529 216 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224543399|ref|ZP_03683938.1| ## NR: gi|224543399|ref|ZP_03683938.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] # 9 94 4 85 856 65 39.0 8e-10 MVKEEVRNLSFLFTETGFVLDTVDREQQDSKWFQRFQEDKYSALYDFGFQERIHQLHAST GFLHRTAELYIHVLTSLSELEIAREQVQITLPVDIWEQ >gi|312956640|gb|AENW01000009.1| GENE 6 4745 - 5389 275 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 210 2 212 245 110 34 6e-23 MKSITLKNITHTYGKHTVLHDVTLSLPIGKMIAICGPSGCGKTKLLNIIGLLERPSRGSV QYDEMEVRANSSRAVKKLRYTIGFLFQNYGLSDNDTVLWNMMSAMEYVKTGKEEKKKCIA QVLEKVGLYGIEQQKICQLSGGEQQRVALAKLMVKPCELILADEPTGNLDEENRDMVFSI LRDLNQKGKTVVMVTHDPVLAKRCDEVILLEKHI >gi|312956640|gb|AENW01000009.1| GENE 7 5416 - 7152 1260 578 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEALSQKFNCTVIRTEQHDSDYIWYLYSPYDIFQYMDISKISEHDLVYENQLRYDTKQNS LRLFNQDIRLVIQPFQNLNQRFQNLAGDYILYFDQDTDKDAFLTDISQQYPGAIQDMGAF ERHAFTLSSYLKENIIPMGIITFLLLGLLLIMLVNQKLKTIGILKSMGMSGLRIGRLLYQ RLFFQILAVSLLSIVLAYIWMIGFVARQIYEAILLLSFFWIGFSIGMFLVFAGTVLLILR CPVYAFIKNRSFTRWFMNLNYLYGILALLILMPLCSTAWEQMQLNLPTFQALLRQQDMLE LYVYAFDYQDGYRFDGYDEESVEEDYRNKKLIQNKMYQVHLKEYEKINREGGIYYRKDVI PKGEELQPYAEVNLNYTKRFPLRKRDGSLIELTDKKDTVYILLPESLNTVDVSYLETYGN RIERLYIQDEQVDAVDFSLLDSMLDTDSPMFYVVYSDDAFRLGKKVTNYVYMDMDKLSTL TSVHNGEHFVPSALLILLVMAEYTHLYLLSFQQRIFVRRVQGTSFFRVYLRLFTELSAPF VFVIALFHQQEEWKITGVFLMISLIASMLFVYVKDKGV >gi|312956640|gb|AENW01000009.1| GENE 8 7576 - 8079 115 167 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCRKWKDNGIIKKGRFLYIKVILLIVFSALEAEDIMMILFGIPKIQLMYAMLLWLICDML FYSDMLLPYFRMKYGMAIRLQKHGMYTWYVKYSGMSCMILCLFRIFLQYNSKAIRVSIAV IMLYTIGEWLIFTLVMILFQRLSQEKQLMIQFVLLIMTRYAFYYFCI >gi|312956640|gb|AENW01000009.1| GENE 9 8046 - 8657 177 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 11 202 10 216 311 72 26 1e-11 MKKAILEICHVSKSFRHQSILSDGNMTVYEGELLYLCGKNGSGKSTIFKIIAGLLEPDTG TLNWMKKVKIGALIENPEYMGSETLFDNLRFLYQLTSPFHKQEVEMLVNRFNLALYNKKP LKKYSVGMLQKVGIIQAIMEHQDFIMLDEPMRGLDKEAQQTFYEIIQELHEEGKTVIIAS HDVMDEIEFDRKLCVENGKIMEL >gi|312956640|gb|AENW01000009.1| GENE 10 8654 - 9457 195 267 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSKNKYCFRVATILVILTILQWVITYMEAYQEATPLNQFYFTTSFPRSIWFEMLLMLLF PYVILMDYHKAVSSGYIHQMMIRVGIKQMFFYSIKQITKYTLIFSILLYAVVLFNSYVIA FIQPNGIPSGQELLSYFLGTYDIPDFLIYFITTVIGICIYSIFMFSLCYVIRNRYLYVFF TPLLLFIGIFSISSFLHPFLLQFSWYAQNSEIMAMPSCILPIALFAPGSLMEAIGFYNFI IGTIVYFGGGISILIIACRKMKKEAFL >gi|312956640|gb|AENW01000009.1| GENE 11 9473 - 9979 118 168 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWGKTRYFKKNILLAFFYLLSIVYYICAYTRDISIDDYLMRIHYITLISNNIIIYYLYRK YSIYKSIHKSIIVRLMKHKFERILWRNAAADASLFVVSNYIVLCSFNVQYIQNTVLVILF LFANFILFLLLEGIVIYSITEDIHKIMLLLLVVLNLFFHYIFIPVAFL >gi|312956640|gb|AENW01000009.1| GENE 12 10035 - 10394 177 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFFTTIGVGAASAQYYQGRLSIPGGGSSDMTGSRMKVNATNNGKMSGVTSAWLGAYGRI CHSDGNPAARQGQKKLNSSLQPLDIDQGVYLTGSLFRGRVFSQGAEPNNITVDVQFTPW >gi|312956640|gb|AENW01000009.1| GENE 13 10475 - 10597 103 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIAVKKLILPFVCLAFLCSDAGIITGPGIQPRGGGIIIEE >gi|312956640|gb|AENW01000009.1| GENE 14 10683 - 11975 539 430 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914893|ref|ZP_02077107.1| ## NR: gi|160914893|ref|ZP_02077107.1| hypothetical protein EUBDOL_00901 [Eubacterium dolichum DSM 3991] # 3 414 2 411 417 236 34.0 2e-60 MKLTDSYKQKLNILIPYYRNQNLKETGEGIWQQSAFYTNSDTKLPVCSSKLYCGLEKQRM LVRDAIYEFAAEKLNKRVMEDDEWNQIIDKTAHQVCKLMDFRKEKESINVLEKACRRLEI CRGVLYYEEILWLFEILKAYFSAMDQVITESEFYHLDAITTVFHNDLKQLAMYYLYVYAN HNEDEKIGYVLNKYEYHASQLLSNQLFAMNADLRKGKILNFLDTGKELEKLFQETNNKIQ LYYLYMKLIAAYIDIDISMACKYIEKIKNFLLTNDELSLRQKSTGYMNMGTLLLYAGRYE DSIEYLEEAIKLSDRKLVRCEICISHAYRMLRLPIPHQYLITDDVAKGDMVDWLLYVFFY NLETVNNEEQKKYLIKKVLPFLEINDKLYLKILEEELELLCDNGKGYKAIYDYHVYVRKK SMRIMNKRGK >gi|312956640|gb|AENW01000009.1| GENE 15 12117 - 13364 1382 415 aa, chain - ## HITS:1 COG:BS_yloM KEGG:ns NR:ns ## COG: BS_yloM COG0144 # Protein_GI_number: 16078637 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Bacillus subtilis # 2 413 5 445 447 301 39.0 1e-81 MNARGIAYTMLRDICLHKTYSNLLLRKGLNQAKPQDKGLITQIVYGTLQNYRLCRYQWED CVKKLPSDEVCVLLDMSVYQLFYMDKLPAYAIINDAVEITKKQIHGNMAKLVNAVLHAVQ RRGKREITGKEEEALAIRTSHPTWLVQMWKAQYGWDNAQKICEADMETKPNAARVNTWKI TRDELMKQDSSFQKGYLSEDALLYDASLAATPWYAQGLLSIQDEASQLIARIVDPQKGEQ ILDVCSAPGTKANHMAELMQNDGSIVCGDIHEHRVELIREGAARLGITILKPQVMDATEL KEVEGILFDRVLCDVPCSGYGVLARKSDIKVHMQSGDMDTLIPIQKAILAKSAEHVKEHG ILVYSTCTLNKKENEKQVQAFLKEHENFTLIEERTIFPYTAHTDGFYMAKLQRIS >gi|312956640|gb|AENW01000009.1| GENE 16 13361 - 14140 662 259 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915467|ref|ZP_02077678.1| ## NR: gi|160915467|ref|ZP_02077678.1| hypothetical protein EUBDOL_01475 [Eubacterium dolichum DSM 3991] # 1 259 1 258 258 248 51.0 3e-64 MQKKEWIPVGAALLLLAFGAVYDYQITDTLYQTLPMTGMIFERFLLLPVQMMTVLAMAML FRVKKNAFYLLIGYAASYYMLQDALHYWVSLQNSGVQLLLLAGSGGLIAVVQLVIQRIPY NWIQKHFSFFVFYTLVLLSAVLITTILKLAWGRIRYRDMQDAAQFCVWYKPCGSIGSNSF PSGHTTAFTTLMCWLQWKKNPYEKPSVWRYLLIGTAILFMPLTRMIMGAHFLSDTAMGFL ITYGCYLYYRQFFRKRGYL >gi|312956640|gb|AENW01000009.1| GENE 17 14151 - 16319 2374 722 aa, chain - ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 128 718 190 801 805 530 45.0 1e-150 MKIAQVFVEHPIMHLDHTFTYACDGFSVQRGVRVQVPFGKTSIIGFVMQVETITEQQAAG YGFTIRPIDKVIDEEPLLNEELFALGEWMAKTCIVPMISCFQCMLPAKLKPKSTHGHAKR EAWIRYVKDGDGLTVKQRAALQALQEEKEMLRSQFYQIYKTPGKKLVELGLAQVYEKEVQ ARLLSKEITQQDLPLHPEQQQALHILQKVSGHEVVLLHGATGSGKTEVFLQLARSVMQQG KQVLILVPEISLTPQMVNRVTARFGSHVAIYHSGLNAQEKYEQYQLVRRHQVQIVVGTRS AVFMPFDNLGVIIMDEEHDTSYKQDSSPRYHCRDIALQRGRHHHALVVLASATPSLETYA RAIKGVYRLIEMPSRINGSFPDVKLVEMRKAVGRGESYLLSNELLAAMYERLQRKEQILL LLNRRGYTPILRCIGCGHVVMCPHCEVAMSYHKDDKQLKCHTCGYTMPVPNYCPECGSDT WRYLGLGTQKLEELVQIKFPDARIIRMDADTTGKKNAHEELLAAFGEHRADILMGTQMIA KGLDFENVTLVGIINGDAMLNRSDYRSAELTYDLLEQAVGRSGRGAKAGEVIIQAYDTTH YAIQCAAHHDYRAFFQNEMKYRHIAGYPPYTYLASMIFSHTSPEEVAKAAARAKKLLEAH AGYRILGPAQLTKRKDEMRMRILLKGKQQELLGQCVREVYDAHLAAKEKARLDIDVSPVA LD >gi|312956640|gb|AENW01000009.1| GENE 18 16700 - 17044 198 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSYTFKPYRGYHVQDVVVDGKSMGQLDSYTFSSVSENHTIHVIFEKDEVKAEHTKLEHAD SAGVQKSSPEKSQTAVKHTAADTFDSTGNEIWLLAGVVSIFAMLCTGIYRFKRR >gi|312956640|gb|AENW01000009.1| GENE 19 17159 - 17812 575 217 aa, chain + ## HITS:1 COG:FN0217 KEGG:ns NR:ns ## COG: FN0217 COG0664 # Protein_GI_number: 19703562 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Fusobacterium nucleatum # 6 210 12 212 217 70 26.0 2e-12 MHNYLETLPFWKELTDDQKQLLSTHIIERSFQKGDILNHGSQECTGLEMMVKGQARIFMM SPQGNEITLYRLLEQDVCVLSAACMIHSLTFTVSMEFETDAVILLIPKQILQIVSSQNCR VKDFTMELVADRFSSVMNTMHDVMFSSNEHRLAQALLTQMQLQEAASLQLTHDTLAHELG TAREVVSRLLKQFQRDGLLQQSRGCITILDEQRLTRL >gi|312956640|gb|AENW01000009.1| GENE 20 18231 - 19943 1487 570 aa, chain - ## HITS:1 COG:slr1588_2 KEGG:ns NR:ns ## COG: slr1588_2 COG2200 # Protein_GI_number: 16332199 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 1 146 143 280 283 110 40.0 9e-24 MEIEITESAYAENFDQLIATVNELRACGFTVLMDDFGSGYSSLNMLSNIELDILKIDMKF LDTSNHQNTRNSSILESITSMGRWLGLRMIAEGVETHEQADRLLNLDCEYMQGYYFYKPM SRDHFCELLADAGRIDVRGMQAKRLPSIDLEDLFHKDITSEAMLSNILGGIALYEIEDDT HLQILMVNDRYYRITGCNAVDLQERSRLITRQIHPEDMPLVWDIFHKAQEAESMGASGTF RRYRLNGELMWMHMQAFFLHKQGNRKLFYGSVSDVSTTMSLQKELLAILQTMPGDIFEYQ VYPDERLSCRVISAGLSLLHGYTTQELQDILENGMLEYIDERDHDEVMRIWSNPKQWKTD CSVEFRLFTKTGETIWVEQHIRYIREEEGVRIYNSLLTDITKIKKQEDELLESQRLLHHL LGIANQRDSPRQLTKRNKEHAAKLYAESFPGGMIGGFCEKGFPLYFANEEMIHFLGYDSY QDLYQGINGMVENTIYQEDRAQVELDLGTTFREGMEYTTRYRMVQKDGSLIWGQDRGRVI CEEQGRLAIISTCMNIDEIVKARQLLQKVR >gi|312956640|gb|AENW01000009.1| GENE 21 20019 - 20624 578 201 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 20 185 417 589 776 84 30.0 1e-16 MYISYQIRKKVQELNGIATRIGGDEFVMLLPQAACDVKKLEPEIIGWIQNYDASIKFLPT VGIYMIQDKTLPIAQMCDRAAIAAASRKGNYASRVAVYQDSMKKLIENRQEVLFGVKNGL DNREFVVYYQPQVSARTNRILAAEALVRWQHPQRGLLPPGEFIPILETSGFIYKLDSYVW EEVCRFLHDRLMKKLRWYRSV >gi|312956640|gb|AENW01000009.1| GENE 22 20624 - 21526 620 300 aa, chain - ## HITS:1 COG:no KEGG:Elen_0467 NR:ns ## KEGG: Elen_0467 # Name: not_defined # Def: diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) # Organism: E.lenta # Pathway: not_defined # 15 297 16 306 1263 122 27.0 1e-26 MDKKLNNEEIEKGVFVINQHYEIVYMDETAKQTFPGCEQHAFCYQMLQESKTPCFDCPLK KTGHQKIENRLLYNQKLEIWMEYVAIQVEWPKEGLCTLISMHAAAPGKAGSVIHAQTDGL LYAIVELHIQRDSFTMLYENLRQQPRLSQNGSLCKLLQKLCTRYVYKEDRADFEDFWNLD TLEKRIAVYSHVSCSFRILLHGAYRWMKFQITASSNEELTDTCLCMIDTMSEELPNPAAG QDYKPHYDELTRLYGKTTFERLAQERLMQDVHQEYGLVDIDIEHFKLFNDWYGIQEGIIC >gi|312956640|gb|AENW01000009.1| GENE 23 21973 - 23352 1215 459 aa, chain - ## HITS:1 COG:SP1939 KEGG:ns NR:ns ## COG: SP1939 COG0534 # Protein_GI_number: 15901763 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 2 439 4 440 456 170 28.0 6e-42 MKHTASLTQGNILQVLLRFSIPFLLANLLQALYGAADLMIIGAYCPAESIAAVSTGTQVT QIITSVISGLTLGATILVAKYAGRQQPDKIEKTIGTTITFFALFSIILSLILAFSTGMIL QLLQVPQASMAQAYQYVFICITGIFFICEYNAFSALLRGYGDSISPLLFVAAACVCNIAG DLFTVGVLHMGVAGTAISTVASQGISMLIAIWYMRRQGSALHFSRRCLKLDTAVLKELIA IGIPVSFQECMVRFSFLYLTAITNGFGVYAASAVGIASKFDIFAMLPATSVSNALTALTA QNLAAGKKERAVGFVRYGICVSMLCSSLFFLWAQLSPQSMISLFSRDAAVIRAGIPFLRG CSLDYLAVSILFCMNGYLNGSEKTVFTMLNCCGGALVIRVPLLFALMHYRVEVLAVYGLV SPLSSTAMLAVIWFYMKKHAVTHNTFISQNSINTSLQKE >gi|312956640|gb|AENW01000009.1| GENE 24 23457 - 24131 723 224 aa, chain + ## HITS:1 COG:CAP0082 KEGG:ns NR:ns ## COG: CAP0082 COG0664 # Protein_GI_number: 15004786 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 23 210 2 182 188 89 28.0 5e-18 MRQIKIPEELYHCFEAAGYRQHYEANEDIYMQGDDAGRIYFIRKGRVRAYYVTSQGRELT YEIIEKGRIFGESSFLSQCARPVCVAAVTQVELMACDLNQLYVYMEQSPGLMQIMLQLLS NTCNHLTAQLRRITLYDRYQRIASLLLSETAAPDYDRGITSSSIPYTQEDLALILNLNRV TVNRVLSEWKKKGIVTASYGKITILKRTSLEALFPAASPKHLTR >gi|312956640|gb|AENW01000009.1| GENE 25 24227 - 25378 1429 383 aa, chain - ## HITS:1 COG:no KEGG:SCO1511 NR:ns ## KEGG: SCO1511 # Name: SC9C5.35, SCL2.01 # Def: hypothetical protein # Organism: S.coelicolor # Pathway: not_defined # 77 284 112 318 355 110 32.0 6e-23 MYNDHDDFEVNDYDEDIRRREALIEEAKNIEISSDWNTVFREISDLKRRWKRISYWDSAY EETLNEEFDSYMDAFYAKRREGYQSNQAIKQELIDRAEKVAASDDWNQATEEMNELMQQW KASGTAGKETDDELWDAFNAARQKFFDRKHEHWENLQTKFSNAKEIKEGLIKEAAALADS VEWNKTGEKFRAMMDQWKAAGSAGREHEDRLWNAFNESRQKFYDRRGEYYDQLHEQQDGK YEEKRRLVEQANEIAQRGEYTREHTDVMKNLSKEWKSIGSCGREREDDIWKEFRTAMDSY FEGLRNWNEQRHAQWRQRMQEARARKQELILDQQRQIKRMQNDIIGLIGERAINDMEEQI ADKKEFIRELEEELADIDKTLAK >gi|312956640|gb|AENW01000009.1| GENE 26 25921 - 26685 642 254 aa, chain - ## HITS:1 COG:MA4170 KEGG:ns NR:ns ## COG: MA4170 COG1145 # Protein_GI_number: 20092963 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Methanosarcina acetivorans str.C2A # 2 235 12 247 294 82 29.0 8e-16 MIVYFSGTGNSAYVAKRLQRELQDEGFDLFSSIRQRKKDTLYAKQPWVIVAPTYAWRIPR VVQEWLKAVELTGSRELYFVMTCGGSIGNAGAYLERLCKEKGWSYQGCMQIVMPENYIAL YDAPKKQEALTIIHNAEKQIAEAAEYIRTNRRIPKPEISVRDFVNSAWINPLFYPLIVHA DKFYATDACISCGKCEQVCPLGNIQLKQGVPDWGKSCTHCMACICSCPKEAIEYGNSSKG KVRYLCSHVVSKEE >gi|312956640|gb|AENW01000009.1| GENE 27 26682 - 27047 335 121 aa, chain - ## HITS:1 COG:MJ1325 KEGG:ns NR:ns ## COG: MJ1325 COG0640 # Protein_GI_number: 15669515 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanococcus jannaschii # 23 105 11 86 89 63 45.0 7e-11 MDKECQKRIAHITSGFHTCKTAFTAIGDETRQVILLILIQSERSGIRVNEIAERAHLTRP SVSHHLQILKEAGIVDMRKEGTKNYYYISADNTQWKQVKQLIDLIYDSVIHLQKEEEERH L >gi|312956640|gb|AENW01000009.1| GENE 28 27060 - 27833 575 257 aa, chain - ## HITS:1 COG:CAC3359_2 KEGG:ns NR:ns ## COG: CAC3359_2 COG0778 # Protein_GI_number: 15896602 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 85 256 1 190 191 117 36.0 2e-26 MNRHEIQINPSLCIGCGQCAKDCPTSNIQLKDKKAEILEAECIMCGHCAAICPKKAVTIS GYSEAAVEQASSVRLDPQKVLEVIRFRRTIRQFQETEIPAEVISQILEAGRLTHTAENKQ DVTYIVIDKEKASLEQQAVKFFRRLKPVANLFSSMARRTVIDDHFFFFQAPVAIVIAAKE EINGALAAQNMEFVAEANGLGVLYSGFFTMVVNHSRSLRAALHIPKGKKAVTTLVLGYPK IRYQRSAQRDTADIRYM >gi|312956640|gb|AENW01000009.1| GENE 29 28424 - 29086 387 220 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKQIRMLLVALSVIFFMTACKDTAGYTAVQSMWHKDMLLSLKQALLEKAIASYYGGDGT AAAMAFMKHKSVQRFMAMWVHEETKDIDQPIWNYDSFARVSIRNHELKELYTDKQFYSCT FTDGHGRWGYCIFQYDEKESAVSNWEVKETTPYQYDLRVNMKEIVDRIMKTDLDILTTSA SSVYLYDEEKKQAEQVILFHDENAAYICYYGDAVLRMEKV >gi|312956640|gb|AENW01000009.1| GENE 30 29172 - 29510 349 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295105918|emb|CBL03461.1| ## NR: gi|295105918|emb|CBL03461.1| hypothetical protein [Gordonibacter pamelaeae 7-10-1-b] # 1 111 1 112 112 98 45.0 1e-19 MSVYFSICVSLSVGLILGAVGGGVKKKLIKKDYTQKQIARNIKFISKAAGLLKYVTCLVL LLGLLWCSYYLILGIMEPKMAEYANNMSELIVAVLSVISIMFAFVEFIRRKE >gi|312956640|gb|AENW01000009.1| GENE 31 29507 - 29704 190 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|226325008|ref|ZP_03800526.1| ## NR: gi|226325008|ref|ZP_03800526.1| hypothetical protein COPCOM_02800 [Coprococcus comes ATCC 27758] # 1 62 1 62 63 73 56.0 4e-12 MKQYEYGNVAYIMKDVVLAVTMEHRDIINDYAVKGYRYAGMIPTEISANGCIRRMDLIFE KDGIL >gi|312956640|gb|AENW01000009.1| GENE 32 29701 - 30162 527 153 aa, chain - ## HITS:1 COG:PA2769 KEGG:ns NR:ns ## COG: PA2769 COG1051 # Protein_GI_number: 15597965 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Pseudomonas aeruginosa # 6 127 5 120 136 85 37.0 4e-17 MDAYIRVGIGVLILQNGRLLLGHRVCSAADTGGIYEPDSWCLPGGKQEYGETILEGAVRE TKEETNLDINDLQVYSAVDDLQPGKHYVTIQVIARACSGTLCVMEPEKQDEWKWFPVDQL PKNIYTPSKKFIDAYLRTQKQDYLQEVRRKETL >gi|312956640|gb|AENW01000009.1| GENE 33 30217 - 30468 259 83 aa, chain - ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 83 174 256 256 76 45.0 2e-14 MDIIPANGGKGFGVKKVLDYVPFTKEEAIAFGDDTNDIEMLQAVGTGIAMDNASQNVKAV ADVICGSVREEEIYRYCKENHLI >gi|312956640|gb|AENW01000009.1| GENE 34 30644 - 30796 56 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPRIPKNGAVRPDKDNAYGSKAFRQTDSDCHHASQLHDDSRSWNGVKVCA >gi|312956640|gb|AENW01000009.1| GENE 35 30821 - 31336 288 171 aa, chain - ## HITS:1 COG:CAC0863 KEGG:ns NR:ns ## COG: CAC0863 COG0642 # Protein_GI_number: 15894150 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 4 161 134 295 300 73 29.0 2e-13 MIQLSEELFQYSLTEITEHDDRLEPVALNDVLEESIAGFYAVLKRRGIEPVVHMPQRKIV RSLNAAMLTRVLANLMNNALKYSDGDLEICLKDTGDILFINTASGLDQVQVARLFDRFYT VHHADNATGLGLEIARSLLERMHGSISAEYAQNRLCICIRLPKTAEKTHTV >gi|312956640|gb|AENW01000009.1| GENE 36 31446 - 31850 357 134 aa, chain - ## HITS:1 COG:MT1009 KEGG:ns NR:ns ## COG: MT1009 COG0745 # Protein_GI_number: 15840406 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 50 123 108 183 230 57 38.0 8e-09 MKGVNMELGTNIWRARKQLQLSQEQLGAIVGVTRQTISNWELNETVPDAKQLLARIAVQL RKTEISEAASCLIYDDIRLDPKTHTTHVQDKVVSLTRTEYAILKLLMQRPDQVITKSLLL EQISEDTPDVQKAH >gi|312956640|gb|AENW01000009.1| GENE 37 32255 - 32701 374 148 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_2153 NR:ns ## KEGG: Dhaf_2153 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 10 143 8 138 166 114 46.0 1e-24 MNYENTEGCRIIQAGFQEQTLQVVRTITRETIQEIYPHYYPKGAVDFFLSHHNEAGIRQD LEAGSVYLLLNEKQLALGTVTLKNHEIYRLFVLPAHQKKGYGRRLMDFAEQKIFECTDIC RLDASLPAKAIYIKRGYRESAYHTDRKR >gi|312956640|gb|AENW01000009.1| GENE 38 32742 - 33095 394 117 aa, chain - ## HITS:1 COG:no KEGG:Slin_0809 NR:ns ## KEGG: Slin_0809 # Name: not_defined # Def: hypothetical protein # Organism: S.linguale # Pathway: not_defined # 9 117 2 110 112 120 51.0 1e-26 MANENNIDYDGKSFIPKLNSVNGEVSEQTVFHYHQKDTVIWAEYAGGDILKGFLIGTVDD AGMLDFTYQHLNIKKEIKIGKCHSIPVVLKDNCIELLEQWQWLNGDHSKGTSILIEI >gi|312956640|gb|AENW01000009.1| GENE 39 33166 - 33423 146 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167746531|ref|ZP_02418658.1| ## NR: gi|167746531|ref|ZP_02418658.1| hypothetical protein ANACAC_01241 [Anaerostipes caccae DSM 14662] # 1 85 168 252 258 106 60.0 4e-22 MQMKKDGHIKFYTLYEWRQLAETAGFTYHDSFETQIRFPRKMDAAFGLECIMKSFDKKTI SGYDIEILQDEIWITEKVQNVMFLK >gi|312956640|gb|AENW01000009.1| GENE 40 33672 - 33941 178 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167746531|ref|ZP_02418658.1| ## NR: gi|167746531|ref|ZP_02418658.1| hypothetical protein ANACAC_01241 [Anaerostipes caccae DSM 14662] # 7 86 1 80 258 107 62.0 3e-22 MEGEMDMEQNSKDSIEKTKQGFEESFKKAAYYDMQTQDASHLEAILSFLPIRPGMKILDL GTGTGYLSFAIAKRYPDCEIYGQDIVAET >gi|312956640|gb|AENW01000009.1| GENE 41 34665 - 35108 343 147 aa, chain - ## HITS:1 COG:CAC3491 KEGG:ns NR:ns ## COG: CAC3491 COG3871 # Protein_GI_number: 15896728 # Func_class: R General function prediction only # Function: Uncharacterized stress protein (general stress protein 26) # Organism: Clostridium acetobutylicum # 11 141 13 142 145 109 38.0 2e-24 MKDCEATIGRLIDKQTTAFISSVDPDGFPNTKAMLSPRKRIGIQTFYFTTNTSSMRSAQY RENPKACIYFCDKRYFRGVMLIGTAEILEDTKSREMIWREGDTMYYPEGVTDPDYCVLKI TVTKGRYYSNFHSETFAVPAVKPITPE >gi|312956640|gb|AENW01000009.1| GENE 42 35181 - 35537 445 118 aa, chain - ## HITS:1 COG:CAC3399 KEGG:ns NR:ns ## COG: CAC3399 COG1733 # Protein_GI_number: 15896640 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 115 1 116 116 120 60.0 5e-28 MKTRMEYTCPLELTHDVTKGKWKPIILWQLGKGRRSLSSLKKEILGITQKMLMEQLKELL EYGMVEKHTYAGYPLHVEYYLTKRGEHMLEAIAIMQEIGVEMMLEDNREEFLKEKGLI >gi|312956640|gb|AENW01000009.1| GENE 43 35598 - 35924 192 108 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3251 NR:ns ## KEGG: Cphy_3251 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 108 12 119 119 104 50.0 9e-22 MDEFTINEMKEMQLILQEKYKDKWEGISVLAGRNKLLWMIGELGEVIDIVKKHGDSEAAH QEDIRKDLIEELADVLMYYNDILLCYDISSEELKTAYKEKFERNMKRW >gi|312956640|gb|AENW01000009.1| GENE 44 35950 - 36129 107 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRRMMVKNRKNRKSSSNDKIAWGLILGFMGGLLLDNIALGLVVGLLIGSLPECIEKGK >gi|312956640|gb|AENW01000009.1| GENE 45 36447 - 36890 376 147 aa, chain - ## HITS:1 COG:L170990 KEGG:ns NR:ns ## COG: L170990 COG0454 # Protein_GI_number: 15672558 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 146 1 146 147 155 56.0 3e-38 MKIMEAIDRNPTLTGQLLEVWESSVKATHLFLSEEEIENIKNYVPQAIQEIPYLIIVVNE HQVPVGFMGIAEQHLEMLFISDVERGKGLGRELLTFGIEKYSVNDLAVNEQNPLAKGFYE YMGFKVYKRTECDEQGNPYPLLYMKLN >gi|312956640|gb|AENW01000009.1| GENE 46 37184 - 37561 154 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291563848|emb|CBL42664.1| ## NR: gi|291563848|emb|CBL42664.1| Predicted transcriptional regulator with C-terminal CBS domains [butyrate-producing bacterium SS3/4] # 1 125 57 181 181 218 91.0 7e-56 MTTRQLAEKLDIVPSTVVMYENGKHPIPYDVAIKLADVLEIEASLLYDDFSHFLSVPYTE ALKSVRTALGLSQKAFAERIGIVPSYYYKIEEGNRRPSRKVYQKIYAALETTSLQTSLLG EHPLQ >gi|312956640|gb|AENW01000009.1| GENE 47 37576 - 37944 218 122 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1745 NR:ns ## KEGG: CDR20291_1745 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 11 120 4 115 117 97 44.0 1e-19 MIGGVAMTQNLTYTRCGDYLIPDIRLSYVSDKPLGKYGRMRRVFLAENNPILLDDMILTE TLFPHLWEIDETAHRRVEQIMTELLEKNPALDKSTQQLAWVQHMSSLKAQAEEIVKAELI FC >gi|312956640|gb|AENW01000009.1| GENE 48 38361 - 39701 753 446 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 445 23 465 470 684 73.0 0 MERFILKKLLDWKNSPYRKPLILKGVRQVGKTWILKEFGRRCYENTAYFNFDENEEYKQF FETTKDVDRILQNLMLASGQKILPEKTLIIFDEVQDCPKVINSMKYFCENAPQYHVACAG SLLGIALAKPSSFPVGKVNFMQIDPMTFAEFLLANGDENLAQYLEQVDTLEPIPDAFFNP LYEKLKMYYVTGGMPESVLMWTEARDVSAMQEALSGIIGAYERDFAKHPNLSEFPKISMI WKSVPSQLARENKKFIYKVVKEGARAREYEDALQWLVDARLVHKIYRSSAPGLPIAAYDD LSAFKIYLVDVGLLRRLAQLAPTAFGEGNRLFTEFKGALTENFVLQTLITQFEVMPRYWS QNNPPYEVDFLIQRENDIFPVEVKSEANTTSKSMKKFKELFPDKVKLRIRFSLDNLKLDD DVLNIPLFMADQADRLIGLALEKRKH >gi|312956640|gb|AENW01000009.1| GENE 49 39756 - 42626 108 956 aa, chain + ## HITS:1 COG:no KEGG:PMI3143 NR:ns ## KEGG: PMI3143 # Name: not_defined # Def: DNA modification methyltransferase # Organism: P.mirabilis # Pathway: not_defined # 9 416 20 415 418 226 36.0 2e-57 MNQYNEISTLQYMGSKTRIISHICEPIIKNKSIKTVVDLFAGTGSVGYALKAHKNIISND LEYYAYIINHAILNGCDFSVTDEISFWNAVEQQSASLQAKVCTAVTTENKFFIDTVDYKQ YQLFCEKTPSVFMPQSDDPRLKEILDLVNQVTPGKAPTVETPCLFLTYYANAYFGIAQCC QIDAIRSIIGQIEDKRTRYVLLTMLMSVMSASASTTTHFAQYLKVKSKATCNNLIGKRKI NIIESCKSLLAEYRQAGLCTADRKAPSVCYNLDFSDCLDSVSLNNETLVYADPPYFKEHY SRYYHVLNTVCLYDYPAMAMNPQTHELSIGRYREDRSVSDFGKKAKALGAFDTLITKCSN AGAWLMISYSDNSIVDISDIQALAEKRYDVLIEKVELSHSKQGRSSISKVDEYIFICRPK EIVHDVDEKLSVIKELKPIVDNPAGFMHNYMARKPYNVVSEIIKRFCPDGGCVYDPMFGS GTTIIEASKLGRKAIGTDINLLAYKLCKASLTRWNLSKVEEAIDTFCAEVSFACESLYCF EDFDEDRILERCHFDQCGSELVPTMYWFKTRKNGKLTGRKKSVASCEFIENYRSFQTDCV QNIDNLPLIPNSRIAVKNGAAVFDYFCKRNLIAIDRIIGILHLHQSEYGYDILELLVSSA INLIKLSDKKASSQMPYWLPQKDITSRNAVMVIMKKAVAFKEGLAYLCEKCHCFIGENVV LENMPAQNISLDLLPNEAVDLILTDPPYTDQVPYLEYNQLWYKVMGWSGFTDESLGSELV VSDAPSRNKDAEDFNNIFAAILKRISPALKMNGYFIMFYHSFDLKSWSEILKMMQEYGLA YCGQIPSAAPRKSFKAIMTPKGTLDGNYIVVFQKKANIKIQPFIGDIDDAKQMAIECAGR IISERVEVTSQDLYDCGMLKESFEHGYLQVLSKKFKTFVDVINDSFVFQDGLWRCK >gi|312956640|gb|AENW01000009.1| GENE 50 42626 - 44977 222 783 aa, chain + ## HITS:1 COG:no KEGG:PMI3141 NR:ns ## KEGG: PMI3141 # Name: not_defined # Def: restriction endonuclease # Organism: P.mirabilis # Pathway: not_defined # 1 769 1 769 781 515 38.0 1e-144 MYWLLDYAEQENLRQRMVHLQSTIMNRQARDQSEQIFPFIGRKSRAIARTLIENLTDENA VIVDPFGGSGTFAYAALDAGRHVIFNEWEPYAYEMSTAPFRGVPSPDEYADALCFIAQRV EPTMNTIYKTRCPNCGAELVFDGLFFDREPLEYYHPTQHERLGENGENVIFRDRRYRCQC GCKEKHYDDFDEAVRLQVESMPCNFPNVALIENSRLNFTAPQYTAYQNLFSKRQQIALMT LKNAIAELPEGTRTFFEDTLISIAHCGKYTDYRSKSQDNHCPENRLKETNLYHRFLEKLK ERKEYIAAQNFDLNQLEVNSMDYRRFLRTIPPNTVNLLLTDPPYGDNAQYFEHAQRVHPL MNYSLSGDNDRLHNEVVISNAPSRTDKHGKEQFLVDIERLFIEANRIVDDHGFMVLYFRP QQRDWVSDLNKLKDFGRRHGFEPLLTISAGIADPSMRALASAAWTFKNDVCFIFLKLQEC ERRWYEGEVDIDELVFLAATSAATDQGNPFVITRFNQEFQSQLRRTGLMRLAHPMYEDKI RRTLDRFTTRNGAQYRLTGLSPYTLMNREMNAEIRLREFAPVVIEELTANGEGFTFEEYV IHLASYMENGSREIINQLHTANRLIPELLNVYAVEDPERGKFFARTTVNTKRDVNGREHL CAMDPADFERLIADYFLRRGFVRAEVIGHSGDRGVDVLATNTQGELELIQCKRYRSGNNI GSTPIQRVDSYMRSRHASRAWVITTSDFTPDGRDEARITNVIIMNGQDLLQSLELYYPGR FCL >gi|312956640|gb|AENW01000009.1| GENE 51 45086 - 47038 616 650 aa, chain + ## HITS:1 COG:PA1939 KEGG:ns NR:ns ## COG: PA1939 COG3593 # Protein_GI_number: 15597135 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Pseudomonas aeruginosa # 170 546 165 583 665 157 29.0 6e-38 MLIDAELEVEPKTTLIVGRNNTAKTSCFECIGNVLDGAPFSFNDYPLQKRENLYTKIALF MEKKITFEELAKQLEPISIEFLVDYSLDDPEDNLGALSPFIIDVDVDTTTALIRVEFRLK ADEKALWKLLEESYYKDGVFTLDDDTHNAIVANFYKLFELTVYAVNPKNPEEKQVKKHKE LKELFPFHIIPAERLLGEDGTQNSSLSALISDFFDMSEDELDPSITKKVKELRSIVENAN KSVQQQSNEILSTLVSSSVGFGYPNSEELQLGVTTQLSIDEQIKNQTQLSYTAGASKESL PSKYNGLGYKNLIKMEFLLAAFAKKVEKCGTACIPLLFIEEPESHMHPQMQHAFAEYLEA FLGKITSVGIQTFLTSHSAHVANTMVFSKIRYTQKTKDGVTYKNLSTFAQENPTHIDFIR KYLTLTKCDLFFADKAIFVEGASERLLLPDMIEKCAKAGDFDSQAYKLPAQYYTLIEIGG AYAYKFIPFIEFLGIPCLILTDLDSVLGTEGKNGRTYYKSVPVYLGETTSNETIKWWWRK SKGLSEDDKGKIPITEITSMTADEKTKGKCHLEFQTKEQGLCGHSLEEAIRNVNRAHYEL EDTITEDDIEFSGKSKTDFALDLVYECDDYTIPAYIKSGLKWLNEQKILE >gi|312956640|gb|AENW01000009.1| GENE 52 47053 - 48798 369 581 aa, chain + ## HITS:1 COG:no KEGG:Tgr7_2850 NR:ns ## KEGG: Tgr7_2850 # Name: not_defined # Def: hypothetical protein # Organism: Thioalkalivibrio_HL-EbGR7 # Pathway: Nucleotide excision repair [PATH:tgr03420]; Mismatch repair [PATH:tgr03430] # 13 549 8 553 579 349 36.0 1e-94 MIENLHGRNYELAKAEADKVDEQIIEVLQAGHSFRVEAGAGSGKTYSLNKVIEWIQSNKW AEYSRKKQNVICITYTNAAVNVIAERLSKDSFILPSTIHSFAWNAIKQYQSFLINIVTNA PDFLPDEGDFLKITEVTYTLGHRYKENGIQYLYHDDVLKLFCILLDNAKFRRVFSDKYPL ILIDEYQDSYSPIIERFIKYFIAEEKGPQFGFFGDAWQTIYQSNKACGVIEHDKLKVIKK GSNFRSAPKIVDLLNEIRPDLPQTSAIDDFEGEVFVITCEDYTGPRRADRNFKNELPPEE LKSRLNKVTEKIKQETPADEELKVLMITHKVLATQQGYEKLLDILNDGLRDKEDPFLLFF METVEPIYHALNTSDMQLLFDTLGIKRYPITKKAEKNKWKELQRQLDEARKKRAIDVFEI INRTKLIPIPPKLDGWYHLYQNTPETIYASNTSIEAFLNLDYAQFIAVKDFLHPEAQYST EHGVKGEEYDNVIFVISKGWNQYQFETYAPMITKKAVIPSGKQASFERNRNLFYVCCSRP KKRLIFFVTVPIDSTFKSFLVELVGEQNIFTFSQYIERKID >gi|312956640|gb|AENW01000009.1| GENE 53 49815 - 49997 57 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIAVIHRGQKFKETMEAFQQKRAEFIAQEIRRFDAETLYIFLEWVRGNGHKLDRITGMAV >gi|312956640|gb|AENW01000009.1| GENE 54 50019 - 51827 1097 602 aa, chain + ## HITS:1 COG:CAC1865 KEGG:ns NR:ns ## COG: CAC1865 COG1961 # Protein_GI_number: 15895140 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Clostridium acetobutylicum # 14 515 3 479 526 212 30.0 1e-54 MKKQRKIEKDNRGVAIYARKSRITNKGDSIGVQFKQCADYAKKELGLDEEYEFFQYEDKG LSGYFSDRPDFQRMLHDVQNGKIKAIVCYKLDRVGRKTADLIRLMDFLEMYHVDLLICSN GINTANGLYKIFIQIFAVIAEFERDTLTERIVDNMMELAKDGRWLGGNTPMGFTVRRVTT GSGKGKSAYSYLESLPEEKQMVQRLFEIFRTNRSIQSTAKQMNEEGFHTPSGAAFNASTT RLVLRNPIYCTADKRSYDYFIDHDGNVFGDMAEFDGTHGLSAYNKTDQEKYEGSDSTFIS PKYVQTIESKPISEWIIAVGRHEGFIPSEQWIEVQELLDAIAEKYNRPHRKTNALLAGLV HCPHCGRRLSVVSESDRWTNGKPRFKYVCPGYRKKECNFKAVDGVLLDEFVVQQLSNLSD ENSDRFKSILEIKIEEVLEQSQTVQEHNLIKKKRDKLKADIAAQTRNLREADGSIKQFIQ EDLQNLAEELRETERQLSKLEEGRKNNMIAIRDLEMTKERLLSFAEYAKDAQPEVLVTLI QTIVERIYIVDKDDERYCHIFIKGCSGEDYTGFFRTAGYIEDNSPSVCDSEQCSISAYIL KY >gi|312956640|gb|AENW01000009.1| GENE 55 51849 - 52529 519 226 aa, chain - ## HITS:1 COG:no KEGG:mru_1007 NR:ns ## KEGG: mru_1007 # Name: ribD # Def: diaminohydroxyphosphoribosylaminopyrimidine reductase RibD (EC:1.1.1.-) # Organism: M.ruminantium # Pathway: not_defined # 12 198 11 202 226 63 28.0 6e-09 MDRAVTTLFMLMSVDGKISTGSSDELDVDKDFPNITGVKEGLHQYYEFEQMSDLWSFNTG RVQQKMGVNEEDFPAKSPVSFVLLDNHHLTEHGIRYFCQLSKEFVLITQNPAHPAFLVKE DNLHIIMQDTLDLVGALEILKEDYGCSRLTVQSGGTLNGLFLRNKLLDYIDIVVAPILIG GKDTATLIDGASITSVDDLHALGVLKLEACDVLKNSYIRLRYKVIN >gi|312956640|gb|AENW01000009.1| GENE 56 53280 - 53771 280 163 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYNSRCNCSSNSGRGSSCARNGERILVNQSGCNTESRSRCSCVNTYRPGCGGNHGSCGCH HHDNDCGCGSNGNSHGCGCGNHRPCPPRPCPPRPCPPKPCPPRPCPPRPCPPRPSCEDRC REQYRRCMRNCRLRDDDLREDYAEAFDYDETDRKYEEYEEYED >gi|312956640|gb|AENW01000009.1| GENE 57 53885 - 54679 916 264 aa, chain - ## HITS:1 COG:ECs0134 KEGG:ns NR:ns ## COG: ECs0134 COG0726 # Protein_GI_number: 15829388 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 30 248 167 390 409 100 28.0 3e-21 MRQRKLTVILLCILLLLYAGNALVQAFNSEDGIPIIGYHHIVPDADKQAFFPNNMWVISL SDFERQMQLLKEDGYHSVTLEDVYAWKMGKKDLDEKSIAITFDDGFYSTTKFAQPVLKRY GFTGSVFVIGSVIDEQHGPYDPKLRQHASHADMQDERVLQYFSHSYDLHHKNADGFRIDQ LNDEQLQRDTEQAAKQGSITYYAYPYGKYNKRIQKILNDNGTRLAFGYNENRKAKRSDDS YALPRFNVNAYTRLDVFRAMLESR >gi|312956640|gb|AENW01000009.1| GENE 58 54686 - 56056 1428 456 aa, chain - ## HITS:1 COG:BH0865 KEGG:ns NR:ns ## COG: BH0865 COG1012 # Protein_GI_number: 15613428 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Bacillus halodurans # 7 454 5 451 452 490 52.0 1e-138 MEIEGLVKKQRAYFRTQATKDLEIRRNALKKLRSAIRDMEAEIHAALRADLNKSDMEAYM SETGMVLSELTYQLRHMEQWAKPKRVHTPLAQFSAKSWTQFEPYGVVLVMAPWNYPFQLS LEPAIGAIAAGNTVIIKPSAYASATSAIIAKLIRRCFPSEYVAVVEGGRRENTELLEQRF DYIFFTGGVEVGRLVMEKASRYLTPITLELGGKSPCIVDRSANLKLAARRIAFGKFLNAG QTCVAPDYVYVEASVKNEFLAYLQDSLHTFFQGSAMDCATYPKIINKKHFARLCALMQEG SICMGGAIREETCQIEPTVIENISWDNAIMQEEIFGPLLPILTFTDLDEVVQTLLDKEKP LALYLFSEQKQNQHRVLSPLSYGGGCINDTIIHLATSAMGFGGVGQSGMGSYHGYDSFQT FSHRKSIVKKANWIDLPFRYHPYTTCKQRLVRLFLK >gi|312956640|gb|AENW01000009.1| GENE 59 56462 - 57976 1706 504 aa, chain + ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 167 452 90 379 450 201 38.0 3e-51 MRGIYNSVTDIRRNVFTEIARLAYEGGDYASSIEKLPFKIIPGERATYRDSIFLERAIVG ERLRLGIGLPVRRMDEHSSLSDGIEESAIAEKYYDDPLVNVIKFACNACPEKTVVVTDTC QGCLAHPCKEVCPKDAISMVNGKSYIDQEKCIKCGRCMDVCPYGAINKLERPCARSCGMD AITSDELGRAEIDYDKCVSCGMCLVNCPFGAIVDKGQIFQTIHAMKSGKEVIAAIAPAFV GQFGPTVTPEKVKGALKELGFADVVEVAIGADLCTVEEAEDFLSKVPAEQPFMATSCCPA WSVMAKKLFPDFKPYISMALTPMVLTGRLIKKQKPDAKVVFIGPCAAKKLEASRKSVRSD VDFVLTFEEVMGMFEAKGINLPQVEADAPFEEGTANGRGFAVSGGVANAVKQCIQKEHPD KEVLIDSAEGLKNCRTMLMMAKAGKRNGYLLEGMACPGGCVAGAGTLQPVIKSSALVKKY TNDAEKKLAFESEYLDNLDLLTKE >gi|312956640|gb|AENW01000009.1| GENE 60 58312 - 59220 1022 302 aa, chain - ## HITS:1 COG:VCA0834 KEGG:ns NR:ns ## COG: VCA0834 COG3965 # Protein_GI_number: 15601589 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Vibrio cholerae # 9 282 28 302 317 96 23.0 7e-20 MNKEKMNYEQRLLHVTVAAGILFSVIEVMMAIYTNSQAVLMDSIYDGAEAVVLALMVFLV PLLYRPYSERKPYGYSQLESFFLLMKGGFLAAVTIGLIVGNVQMIVNGGNHVDQGMIGWF ELFLAVLSAVILIALLVMNRRVDSPLIKAELLGWKIDVCSSIGVAAAFLCAGLLADTSLA WLSPYVDQIIAIVIAMIMLPQPWRMMKDAFRSLILFAPEEDVTQRIRRLADHEFERYSYE PTFYNIIQTGRKLWVEIYIRNDTNMINVTQLAAIQKQLSSSLQDIYDDVYVEITPDIKEA AG >gi|312956640|gb|AENW01000009.1| GENE 61 59473 - 61404 1884 643 aa, chain + ## HITS:1 COG:CAC1782_2 KEGG:ns NR:ns ## COG: CAC1782_2 COG0171 # Protein_GI_number: 15895058 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 326 639 2 313 313 391 60.0 1e-108 MENYGYFHVACITPAVQIADVETNRKTMQRLLHTLRPDIRLAVFPELSLCAYTCQDLLYQ NLLLDDCLAALKALRDENESEAILAVGLPLRQGNHLFNCAAFLYKHDILGIVPKTYVPNY NEFYEKRWFSDSEQRMLDTISLFGKSVPFTPNLLIHDETSGAVIAAEVCEDLWVPIPPST RHAGHGANVIVNLSASNETVGKSEYRKAIITTHSAKNMCGYVYTSAGVSESTSDLVFSGH DIIADNGTIISESEILEEEHILYGEIDLEKCRSERLKFHTAMQIQDSCTYTEVTIRTAPI TQPLQLMRDISPYPFVPGEEAQRSKRCMQILHMQAAGLAQRLKKINCTQLIIGISGGLDS TLALLVAHMAFERLGLNSKGILAVTMPGFGTTRRTRGNSHKLMAALHTSVKEISIHDACE QHFHDIGHDPKQLDITYENTQARERTQILMDLANTYNGIVLGTGDLSELALGWCTYNGDH MSMYGVNASIPKTLVRHLVKTYAQEMRKTEKTDIADVLDDICATPVSPELLPPKADDEIA QITEDAIGSYAYHDFFLYHMLRNHYAPAKILKLAVLAFPQEERKVILDTMRIFYRRFFTQ QFKRNAMPDGVKVGSICLSPRGDWRMPSDASAAAWIRQVNDLQ >gi|312956640|gb|AENW01000009.1| GENE 62 61534 - 63756 2371 740 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 299 723 327 749 776 196 30.0 2e-49 MKKHGSIKQAIVLAALSLLFFACIAGFYIDRIRNSLITDLKHNVQEISASTTTAIEIRIH DHMSTLENISYMLQNEHTTDTEKLLQALMSASANSEFMRYGITDEKGNCLTTDGMQFYVG DREYFKEALKGKSSFSNTLHDKIGGYDLNVFATPVRAEDGSIRNVLFAASRTKDVADKLL MEIYDGKGFSSIWDEEGNIVLNSNSETASRAVHNLKQLSFYDDFGTEKLKKQESGIVKFK SMNNEDRYLAYEPLGYNNWYVFSVVPVSVVTSQINNVIVIAAATWFLVALVLSGIICYLY MSRVRNEKKIDKVVFYDDLTSHYNYNKFRMDVQMLLDKGQADSYALIEFDVSDFKLLNEL YGYQGGDQLLITTMRLCEENCSADERCARISADRFIVLWEMRDTDSIASRYAALMEAVQE DMRKQREQFKADFYAGVYLLQNTDREFSPCHDRCMHAKMLGKAEKKQRCTFFSEKMYDTM LYQKRLEGQMEQALQHKEFKVFLQPKVTLRDDIVHSAEALVRWDSPIFGMIPPMAFIPLF EKNGFLEQLDMYMMDEVCQLLKKWEQTYPSLRISINVSRMYIFRPGFARRVLEIVERNGV STKQLEIEITESVIFDRSLVLFAIIQELRSYGFRISMDDFGSGYSSLNMLKDIPIDTIKL DQVFFQTNHGNTQRARDIVGGVLSLAKTLGIHSVAEGIEEADEVVFLKEHGCDEIQGYYY SKPLCVEDFEAYICRQNADR >gi|312956640|gb|AENW01000009.1| GENE 63 64234 - 65973 1759 579 aa, chain - ## HITS:1 COG:no KEGG:Haur_2253 NR:ns ## KEGG: Haur_2253 # Name: not_defined # Def: hypothetical protein # Organism: H.aurantiacus # Pathway: not_defined # 74 564 108 610 617 281 38.0 5e-74 MNYKKAAWMSAFLAGALVLAGCQSDSDTEDTTFAVNTNTSAVKQSSTLSLEAEDYDTEIN DAQKISLDEQSGDVKITKAGTYQLSGTLKNGSVVVDAKAAVVRIVLDNAHIRSKNSAPIY VKQADKVIITLPKGTASSLKDTASYTVDEKEEPSAALFSKDDLTINGSGTLNITASYKNG IQCKDTLKLVDTNLNITAENDGIKARDALLIYKGSYMVQAQGDGIVTTNEKEQGNLCIDQ GTFAIEAQQDGLQSAGDLTIYDGVFTVTSGGGCVNKVGTGSALQPWGEFDDHDEAVQKSQ KGIKAAKNMVLYKGSYTISSHDDALHANGSMDIKGGTYTLSSDDDGVHADDTLTIHNGTI QVKQSYEGMEANTIQIKGGALQIKASDDGINAAGDLGNPLLTIDGGTIYVDADGDGVDSN QDIVMNDGTLIVMGPESGGNGALDYDGSFAMNGGTLVAVGSSDMAMAPSTSSTQPSLMIR TDSTQPAETILYVQDEDGEIILGVSSVKAWQNVVISTGTLKKGSTYDIYVGGSASSVKNG VFTNAKSGTLLASMTLNDVVSTYGNAGMLQGPQGDGRHP >gi|312956640|gb|AENW01000009.1| GENE 64 65963 - 66634 962 223 aa, chain - ## HITS:1 COG:no KEGG:DSY1217 NR:ns ## KEGG: DSY1217 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 223 5 232 232 182 45.0 1e-44 MFTSILNLEQGLTILNGVVCCMSALGLGLIIAWFYRRLGYCSHSFTVTLALLPALVQFVI MMVNGNLGTGIAVVGAFSLVRFRSLPGSSKEILFIFFSMAIGLAIGMGYVSFAAFMTIVI SMSAWLLFTLLQPNNLQLYKELKIVIPEDLDYTEVFDDILQSYCKRAELVRVKTIQLGAM LEMTYHVELKEVKQEKHMVDDIRCRNGNLNVIVAKRQAMQNEL >gi|312956640|gb|AENW01000009.1| GENE 65 66616 - 67320 687 234 aa, chain - ## HITS:1 COG:no KEGG:SGO_0092 NR:ns ## KEGG: SGO_0092 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 2 223 7 230 245 143 38.0 6e-33 MKQVIQRFEKKYLLDADQCRSFVMRIQPYITEDIYPVSTIYNLYLDTEQFDLIHRSIEKP PFKEKLRIRSYTPVCSEEEPIYLEIKRKYAQIVCKRRMQLSYGECRRFLNNPNLSASQIE KELSYTLYHYQVQPRIFLAYDRISYVGKQEQQLRITMDSHIRSRFDHLSLNDHESNEELF HRDMILLEIKAERSYPLWLSSVLSDMRLYPTSFSKVGQVFYKKEKGELLCLQAS >gi|312956640|gb|AENW01000009.1| GENE 66 67455 - 68567 1090 370 aa, chain + ## HITS:1 COG:CAC1574 KEGG:ns NR:ns ## COG: CAC1574 COG1454 # Protein_GI_number: 15894852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 1 370 1 371 371 358 49.0 7e-99 MDVFQQKTKILQYETVQEFLRDFTFQKKDYILASRSIYEAFFRDSTGRASIAFHSDYGQG EPDDRMLDAMLKDMREKQPERIIAIGGGSVIDCAKLFVLEGTASAEDMFLHRCTPEKSRE LIAIPTTCGSGSEVSRISICELTSLHTKLGLAVDALYPDQAVLIPELLSKLPFFYFVTSG IDALIHASESFVSPKSNAYTRMFSAEAIRLLLHGFQVIAKEGEDARMRLLGDFMQASNFA GIAFGNTGTGAVHALSYPLSGIYHVTHGEANYQFFTAVFQTYEAREKYSVYDIKKLFSEA LSCSMEDAFTCMETLFSTLLARKPLHEYGMKESEIKGFTDSVIESQQRLLSNSAIPLSRD EIHSIYKALF >gi|312956640|gb|AENW01000009.1| GENE 67 69050 - 69649 569 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167757196|ref|ZP_02429323.1| ## NR: gi|167757196|ref|ZP_02429323.1| hypothetical protein CLORAM_02746 [Clostridium ramosum DSM 1402] # 7 194 9 196 196 158 47.0 1e-37 MMKQSRDFARVFSENWNRKLKSVRLLGAVVSLCMLVCAVLCMHSAVLMHQALKTAAALVI IALGMYQLVDYYYMPVLLRDGGTLIGAVLNTVIGMLLLFSPVEITVSVFAYMFGFLLMIF GVNKITFANKLHFFGIFDYSWVIASGVMNILAAAVFLIIPLISIVMLNTALAGYLAVGGI TLLVEVVTMKNMKIEDAQE >gi|312956640|gb|AENW01000009.1| GENE 68 69646 - 69921 279 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKGWKCICTIGGVAALCAGASFVKDYRNMKRMEKSLDSLPLHKLKEKLSDIQEDKEKTV LTIPKDMPMLERLRVCRHVLHGNVGNRDACK >gi|312956640|gb|AENW01000009.1| GENE 69 70207 - 70923 808 238 aa, chain + ## HITS:1 COG:CAC3166 KEGG:ns NR:ns ## COG: CAC3166 COG1342 # Protein_GI_number: 15896414 # Func_class: R General function prediction only # Function: Predicted DNA-binding proteins # Organism: Clostridium acetobutylicum # 1 94 1 95 143 74 41.0 1e-13 MPRPCKKKCVSSIPSYTAFIHTDEPIPASHIQMSVEEYETIRLIDYLGWNQEECAKQMQT SRGSVQSLYNEARRKLSRFLMEGSAMVIAGGNYQLNLAQKPTGDDSMKIAVTYDNGQVFQ HFGHTQMFKLYEVTNQEVTATRLLDTNGNGHSALVTLLKANQVDTLICGGIGGGAKNALA EAGIELYGGACGDADAQVTSFLNGNLQYNPNIQCSHHGEGHTCGSHEGRGHSCGSSHL >gi|312956640|gb|AENW01000009.1| GENE 70 71349 - 71528 129 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHPVMKWGGTCYYIYSKNAWNHERRFDTSIESDSVATATANFKTQTHKKTSLKQDAVF >gi|312956640|gb|AENW01000009.1| GENE 71 71588 - 71794 280 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKAFQVEGMMCQHCEQRVNKALQGMEGVRACSASAKDGIVNVEYDAQRINDAAIIQAIT DTGYDVKG >gi|312956640|gb|AENW01000009.1| GENE 72 71836 - 72393 339 185 aa, chain - ## HITS:1 COG:no KEGG:CD0628 NR:ns ## KEGG: CD0628 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 2 183 4 191 193 201 55.0 9e-51 MKKKRSDYLWIASLLYLFLGLFHILFAWLGLICFLVPLLLAVGKGEKSYCNHYCGRGQLM QRLGNRFSAQRACPGWLRSRWFRYGFLLFFLSMFASMLYMSYAVLQGKPLSASITLLWTV RIPWFVKSGAQDWILQFAYGFYSLMLTSTMLGILTMLVYKPRTWCVYCPMGTMTQMACRV KKRKC >gi|312956640|gb|AENW01000009.1| GENE 73 72390 - 72572 97 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKAFVEEKECVACGTCLVTCPRQAIHIAHGCYAVIDSVRCVGCGLCSKACPASVIEVHS >gi|312956640|gb|AENW01000009.1| GENE 74 72636 - 73400 595 254 aa, chain - ## HITS:1 COG:no KEGG:Bmur_0415 NR:ns ## KEGG: Bmur_0415 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain protein # Organism: B.murdochii # Pathway: not_defined # 1 254 1 256 256 184 38.0 2e-45 MAFYTILFSPCGRTRRIAEILEREWKEEQRICIDLCDPQVTKSLPYFKEDDTCIIAMPSY GGRAPQTALQRLRVIQGNHASAILVCSYGNRAYEDNLLEMKECAQESGFVCRAAIAAVAE HSILHQYGAGRPDAQDTQELNVFARQIREHLEKDAACELQVTGNHPYKPYNGVPLKPSAN QSCMQCGQCAAQCPVQAIPIKHPEKTDTDRCISCMRCIAVCPVHARSLNKLLLAVSVRKL HKACVTRKSNDLFL >gi|312956640|gb|AENW01000009.1| GENE 75 73749 - 74057 506 102 aa, chain + ## HITS:1 COG:SMc02761 KEGG:ns NR:ns ## COG: SMc02761 COG0526 # Protein_GI_number: 15963786 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Sinorhizobium meliloti # 2 100 3 102 107 97 43.0 5e-21 MTIHVTSGNYEEEILDSTKPVLIDFYADWCGPCQMLKPVIEQISEEAEHTKIVKINIDEE PQLAGMFQVMSIPTLVYMQNGSIQGSVSGYHSLGQIKSWIGE >gi|312956640|gb|AENW01000009.1| GENE 76 74856 - 75368 165 170 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2242 NR:ns ## KEGG: Sterm_2242 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 22 159 5 146 153 82 33.0 6e-15 MICIKISDCTQLETEAIMQNKYQQKYTEIFQQIGDHAKLVLATSLNNKVSARTMSFVILE GSLYFQTDKEMRKYQDIKGNPNVALCFSNIQLEGICEEIGRPIEHEDFCRLFQQHFPSSF EAYSQLPNERLFVVRPTFIQRWSYINGSPMIERLYLHEKQYHEEVYLNDD >gi|312956640|gb|AENW01000009.1| GENE 77 75413 - 76036 441 207 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3616 NR:ns ## KEGG: Cbei_3616 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.beijerinckii # Pathway: not_defined # 2 207 16 226 226 171 42.0 2e-41 MMTQEELADRLGVSRQTITKWEKGTILPSLEYLIDLSRLFGVTIDHLVKDDDCICESSHQ VHTTALAEFLVTAKRSTYAARKNKTEGTRQGSHDYMFSRNPYTYRDSFFGASCFSGQELV YRDAQACWSMNYYGTVLHEAFHGDFLKEALMLVDTQRPYRGPAMYRKGEYTYISEVVGDI CLFQGHESIFYQTQKIYEGCFHGGVIR >gi|312956640|gb|AENW01000009.1| GENE 78 76526 - 77308 660 260 aa, chain - ## HITS:1 COG:FN0428 KEGG:ns NR:ns ## COG: FN0428 COG1387 # Protein_GI_number: 19703770 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Fusobacterium nucleatum # 4 251 3 251 258 195 41.0 6e-50 MNYYDQHVHSSFSFDSQTELSDYLKHADGCFVTTEHVDLENSANHFMDSWMDYDRYSLYL ENLQKNTDIRLLKGVEIGWLRKHHGRLMAWLQCKQFDIILLSIHQNGIFDYMDEEAKKHD IIYILRSYFQQMLDALRSGIPANVLSHFDYVSRIQDVDTDTFLTIAQPYMEKIFPEMIKR GIALELNTRSMFQYGQLPLYEIVVDWYIQMGGRMFTMSSDAHKAQAYAYHFDEGKEFLRR HDISKLTVFQEGKPIEIAWE >gi|312956640|gb|AENW01000009.1| GENE 79 77504 - 77824 276 106 aa, chain + ## HITS:1 COG:no KEGG:Shel_05260 NR:ns ## KEGG: Shel_05260 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 1 99 1 99 106 69 41.0 3e-11 MNKEEILARSRNENKGMDIMELQSLEKASRIAAQVGMLLCCFVAVMEVAVTGQVSMESWL IYFGILSTLFLMKYRLMKKRHELFLSIFYTALFLMFLVLFLWKLLC >gi|312956640|gb|AENW01000009.1| GENE 80 77818 - 78036 264 72 aa, chain + ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 11 68 5 62 68 61 48.0 4e-10 MLKEELILRNRLKQARTAMHLSQTQLAELVGVSRNTISSIETGQFNPTAKLALILCIALE QKFEDLFYFDEA >gi|312956640|gb|AENW01000009.1| GENE 81 78353 - 79012 529 219 aa, chain + ## HITS:1 COG:lin2076 KEGG:ns NR:ns ## COG: lin2076 COG1309 # Protein_GI_number: 16801142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 10 107 2 98 206 62 32.0 6e-10 MSAITPQLQEQRKAALLNAALREFAEYGYEQASTNRIAKEAGLSKPLMFHYVGNKQQLFL FVYEYFFDLLNKEYYRQLDCTEPDVIKLLHGAYRLQLRLLYAYPWVFDFFKMYAGMDIRI FDEDLQQRLKKCRTKDCTDLFEQYDHSLFISQLEEAACMQILYCSCKGFGDLMLDKIRTM QKEELSFSSVEEDLHVFFEGLRRLMYKDSAAEAPHACNE >gi|312956640|gb|AENW01000009.1| GENE 82 79005 - 79697 257 230 aa, chain + ## HITS:1 COG:SA2004 KEGG:ns NR:ns ## COG: SA2004 COG0739 # Protein_GI_number: 15927783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Staphylococcus aureus N315 # 33 196 131 266 284 79 30.0 8e-15 MNKPILMRFPLIGEWNTPNTPGSRIPSHGTNALGTRYAYDFLQLNWKKRGHPCYRSHVLS YLLFGVALSSCYCYGLPVYAPCDGRVVYVMDGCRERKRAWFFSDALMAFKNSRRRQDQEI CEISGNAVIIQYTDTIYAAFCHLQPNSIAVAVGQYVKAGDFIGSIGHSGNSMFPHLHFQL MDSADFLHASGLPCAFTQYEVLENGQWHTVYGGIPTAQQRIRYAPVDEYV >gi|312956640|gb|AENW01000009.1| GENE 83 79721 - 79993 378 90 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1648 NR:ns ## KEGG: Cphy_1648 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 88 1 88 93 118 68.0 6e-26 MNPKIYEFDAVLQKVDGIDGAYIEFPWDVKEEFQKGRVCVHATFDNVAYDGSLVRMQTVR HILGVRKDIRAKIGKQPGDSIHVTIQERSR >gi|312956640|gb|AENW01000009.1| GENE 84 80221 - 81129 1155 302 aa, chain - ## HITS:1 COG:FN1237_1 KEGG:ns NR:ns ## COG: FN1237_1 COG4750 # Protein_GI_number: 19704572 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes # Organism: Fusobacterium nucleatum # 77 300 3 227 266 129 34.0 6e-30 MNLTLNQFETLVYIERHQNDKCTQRRLAKKLDLSLGVINKTLTELQDSEVIKTRGSSMYD VTLKGYEVLEPYRVKKAIFLAAGFGSRMVPITLNTPKPLVLVHGKRIIETLLDAVVAAGI EDITIVRGYLGEQFDVLLHKYPKIKFIENPLFNETNNISSAYLIKDMMCNAYVLESDLLL YNPEIIRKYEYTTNYCGIKMDVTDDWCFYTRKGYISRLAVGGKDCHQMVGISFWNKEDGE KMAKDIEEVFKMPGGKEKYWDEVALREKLSNHKVIVKPVRQEDIVEIDTFKELKQIDPIY NV >gi|312956640|gb|AENW01000009.1| GENE 85 81219 - 82805 1884 528 aa, chain - ## HITS:1 COG:SMb21542 KEGG:ns NR:ns ## COG: SMb21542 COG1178 # Protein_GI_number: 16264731 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 31 523 161 661 680 259 31.0 1e-68 MNNKRYQASRVLVALFLFFFVICPLIALLVNIDAKDIHKVLTSPQFQPMVINSLCTTILA TLLSVSLAFALAWFMNRSHIRHRSVYTMLFTLPMLIPSISHGMGLVLLFGDNGIISNLLH MKFFLYGYVGIILGSILYSFPVAFLMLNDTFQYEDYTTYEAASVLGLSKRQQFFTITLPN IKGPLISVVFSVFTMIFTDYGVPLVVGGKSITLPVYMYREVIGLLDFSKGAIIGILLLIP AVIAFVLDLKNENKGSSSTVTRSYQIAPNAKRDRIAHIVCIATVVFLSLPLITFAVLSFV NHYPTDLSLTLDNIIQAMDLGVRMYLKNSLAIAMLTSMVGVCLTYLTAFMTARNASQLSS RVLHLVSMISLAIPGVVLGLSYVLFYKGSFLYGGIAILVLVNITHFFANPYLMAYNSLQQ FHSNLEDISAAMGISRFRMLKDVYIPCTKGTIVEMFSYLFVNSMVTISAVSFLANFRNMP LSLLIPQFDSQSLIEATAFISVVILLVNLIVKLLVYVVKRKLIKDHEA >gi|312956640|gb|AENW01000009.1| GENE 86 82795 - 83580 409 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 11 240 4 240 245 162 37 2e-38 MEVLEKEKLIVRDLYKNFDGKDVLKTISFTVHEGEFLSVLGPSGCGKTTLLRILIGLEQQ TKGQILMDGEDISHLKPSERNMGIIFQNYALFPNMTVLENVEYALKLRSDKKAESRKIAL QTLEAIGMSDQIKKRPSQLSGGQQQRVAIARTLALNPKIILLDEPISALDVSMREVMKKE LKDIQKRFNSTMIFITHEQEEAFYLSDRIMVMSEGNIEQIDTPQNIYHHPANQYIIDFVN AHLDGKLESLCKCTGKQVYEQ >gi|312956640|gb|AENW01000009.1| GENE 87 83568 - 84545 1362 325 aa, chain - ## HITS:1 COG:SMb21540 KEGG:ns NR:ns ## COG: SMb21540 COG1840 # Protein_GI_number: 16264729 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Sinorhizobium meliloti # 13 272 14 275 340 110 26.0 3e-24 MKKLILAMVVITMALLVSISNEQNTIIVYSSMEQFRGEELQQQLNEKFPDLHVMVMYVST AKAAAKISVEQEQSDADIVVGLETSYMEKIKDQLADIKGKSRLQYLDGLAPKDHGNAYVT WERQAGAFIINTDVLKKHKLSEPKTYEDLLDRKYYNLIAMPDPKSSGTGYFFYKNLVNTM GEAKALAYIDQLEFNVKQFTESGSGPIKLLIQGEVGIGLGLTFQAVNQINTGSPFKIIYP KEGSPYSLTGTGLMKRHADDPDVQRVFDFIINDFLLYDKEHFSPEAILKDQKNTIQNYPT HIPYADMNGIEDIHEKERLLDLWKY >gi|312956640|gb|AENW01000009.1| GENE 88 84730 - 85329 788 199 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915460|ref|ZP_02077671.1| ## NR: gi|160915460|ref|ZP_02077671.1| hypothetical protein EUBDOL_01468 [Eubacterium dolichum DSM 3991] # 21 191 37 207 216 92 27.0 9e-18 MKHKLPILLVFCMLLQLSGVQAAEKEERLLLMSDDLAWLIDVRIKEDDSLQIGFLPANLL VPIACAQGYAAPLSHVKMETNRECITESVGNFLHVDYDHSIYLHMKTFSRDVGLTLPDTG LKTSGELVDFMHKASDKLEMSMLFHYKNYITSDLSAMDYIRYYRRLHGKKLSITYAYMNY MDMEDASIPMDNQLHVRKK >gi|312956640|gb|AENW01000009.1| GENE 89 85488 - 86201 663 237 aa, chain - ## HITS:1 COG:AF1142 KEGG:ns NR:ns ## COG: AF1142 COG1213 # Protein_GI_number: 11498742 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar nucleotidyltransferases # Organism: Archaeoglobus fulgidus # 1 222 1 227 241 99 28.0 4e-21 MKAILMAAGMGTRIATKTNEPKCLLDIGNGPLIRHTVELLLNNHMEVCICLGFKGYLIRE ALRDYPITFYENPFYRVTNSIASLWFSREQLDETQDLLLANADVFWQQDILDLLLADQRG IVLLADSSRRLSGDYFFHCENGILTDYGKDMPEAERTSEYVGIARIQKQEIACFRKQLEL LVHEGDCQLWWENTLYSMIPQKQIPVQDIAGHYWSEIDVLQDYENILDYVHRHPQCL >gi|312956640|gb|AENW01000009.1| GENE 90 86198 - 87253 1058 351 aa, chain - ## HITS:1 COG:TM1400 KEGG:ns NR:ns ## COG: TM1400 COG0075 # Protein_GI_number: 15644152 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Thermotoga maritima # 7 338 14 345 384 136 28.0 8e-32 MKLFTVGPVEMYPETLQVSGTQLPYFRNDEFSSIMKENEQQLLTLCGCRKGRALFLCGSG SAAMEAVVACSFRRQDKVLILRGGSFGERFVQLCRIYGIPYDELCLQELEALRKEHLDAF FQNEYCALLVNLHETSTGQLYDIQLLSAFTKAKNMYLIVDAISSFMADPLDMDQMGIDVL ILSSQKALALSCGLSMVVLQESFYRDMVEPKDDICLYLSLKEHARNMERGQTPNTPAVGI LMELHERLQHLQGDGFVLEQQRIATRAAYFRSRVQKLEIQLPHFPLSNALTPLLFDGDAQ KVYQFLKKSCAITLTPSGGAMRERMLRVGHLGNLKLCDYDALCDGLREYGK >gi|312956640|gb|AENW01000009.1| GENE 91 88502 - 89605 841 367 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_01577 NR:ns ## KEGG: EUBELI_01577 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 359 1 365 365 265 37.0 2e-69 MSNLFDYLTWRNDLTFSKVPCCAVDTLICSCLSYLRLQPVFAKQDMLYVKRASEIIRAIN PEEIHFRVKEDLQLLHKMAEGNRYGNVILCGYVDHLDPSMEKQFYALTCLLEDDVMLITY RGTDNTLVGWKEDFNMTFLDTIPSQKEAVQYLEAMAIAYPDRRIILCGHSKGGNLAVYAA AFCSFAIQNRIQRVYNHDGPGFSAETLQAAGYRSIAQRIETFVPQSSVVGMLMEHEEHYT VISSTQISLWQHDPYSWEVLGPDFVRLDALDRQSIVLDSTIKHWISELDRSQREAFTDAV FQILSNTNAASFKEMNENRMHSTALILKALNRTDKQTKKMLSDIILKLLSSAKSAIETNL ENGKPTD >gi|312956640|gb|AENW01000009.1| GENE 92 89708 - 90778 696 356 aa, chain - ## HITS:1 COG:HP1044 KEGG:ns NR:ns ## COG: HP1044 COG1408 # Protein_GI_number: 15645658 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Helicobacter pylori 26695 # 11 356 8 367 370 105 28.0 2e-22 MRMQLFLLLCLLLLILMQLFFWHMIKKLYKKKQIRYALSILSLLGSVFLIYRFTPFFAMY KDAMPMRGALVLVLNSVYVAQMTGFCLLALLHKLYCRRYSKEFHSRLYVLVSVVMLLFSV YGIGCAARVKVRQEIVELKGVKQEQQLLYITDLHAGTTLSSPYNTIKRLAGKCDIVLLGG DLFDESTSQKDMEALCTMLSDLHKDVYYAGGNHELLQKRRREYEAMLRSAGVHILQDESA VVNGVRIIGRRDRGEERRSWSSLTKEYQGNEPVILLEHRPESVEESLDAQLLQLSGHTHN GQIFPNTVLTRIPYPRAYGNYDVGYRMLVSSGAGTWGFPMRVASHNEILFVTIRPK >gi|312956640|gb|AENW01000009.1| GENE 93 91013 - 92149 1082 378 aa, chain + ## HITS:1 COG:MJ1227 KEGG:ns NR:ns ## COG: MJ1227 COG1180 # Protein_GI_number: 15669412 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Methanococcus jannaschii # 153 378 7 234 240 117 32.0 4e-26 MDNSNYLYLNTSILYRCGQKYYDKKLSGHDINAAQILFLILIYEQEGLNMQQLAQKGCFD KGTITKSISRLEELGYVTTQSSPQDKRIRLLYTTDKTKDIIRDIYMIRQQWWELLSKDIG AQELQQFEATLSRLSENARKYEQQEEAGIKLFGIQKLTLLDYPQKMASTIFTGGCNFRCP FCQNSDLVFLPENMPELQEEDVLSFLEKRKGILDGVCISGGEPLLNPELAGFLKKIKDMG YAVKLDTNGSSPDQLKHLVEEGLVNYVAMDIKNAPQKYSETAGIRNLDLSGIQESITYLK EGHVACEFRTTIVKELHTAQDIQDMADWLQGAAAWYLQNFEDSDRVIQKGLHAWDEETLQ QFQKLAKAKVPNTELRGI >gi|312956640|gb|AENW01000009.1| GENE 94 92168 - 94546 2069 792 aa, chain + ## HITS:1 COG:RSp0963 KEGG:ns NR:ns ## COG: RSp0963 COG1328 # Protein_GI_number: 17549184 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Ralstonia solanacearum # 3 652 5 649 683 716 51.0 0 MYQVIKRDGKISEFDIAKISNAIQKAFDAVERQYHPSIIDMLALRVTSDFEPKIRHDRIQ VEDIQDSVESILIQSGYGDVAKCYILYRKQREKIRNMKSTILDYKELVDSYVKATDWRVK ENSTVTYSVGGLILNNSGAITANYWLSEIYDEEIGNAHKSGDMHIHDLSMLTGYCAGWSL KQLIQEGLGGVGGKITSKPASHLATLCNQMVNFLGIMQNEWAGAQAFSSFDTYLAPFVKA DNLNYDQVKKCVESFIYGVNTPSRWGTQAPFSNITLDWTVPADLAELNCIIGGKEVDFKY KDCKKEMDMVNKAFIEIMIEGDANGRGFQYPIPTYSITRDFDWSETENNKLLFEMTAKYG TPYFSNYVNSDMEPSDVRSMCCRLRLDLRELRKKSGGYFGSGESTGSVGVVTINMPRIAY LSTDKEDFYKRLDHLMDIAARSLKVKRTVISKLLEEGLYPYTKRYLGTFANHFSTLGLIG MNEVALNAKWLGMDLTQKEAQKFTKEVLNHMRERLVIYQEEYGDLYNLEATPAESTTYRL AKHDKERYPDIITATEEGNTPYYTNSSHLPVGYTEDIFEALDVQDELQTLYTSGTVFHAF LGEKLPDWKAAAALVRKIAENYRLPYYTLSPTYSICRNHGYINGEHYTCPQCGGATEVWS RITGYYRPVQNWNEGKSQEFKERKVYDIGHSVLKGKDALPHVEKEADTVRAANEEGVFLF TTKTCPNCKIADTWLKSAGISYEKVDAEEQAELTKKFSIMQAPTLVVCRDGSCETYSNAS NIRKYIDMMQKA >gi|312956640|gb|AENW01000009.1| GENE 95 96284 - 96967 495 227 aa, chain - ## HITS:1 COG:no KEGG:Aflv_2429 NR:ns ## KEGG: Aflv_2429 # Name: not_defined # Def: hypothetical protein # Organism: A.flavithermus # Pathway: not_defined # 33 218 38 232 249 113 30.0 7e-24 MRKVKSRKYKKQKLILLLVAIVLGFGCVVRSFNTYMEPQLQAIAKQHTGFAINNIVKEVL ADIEYDTDALFKINRTKNGDITSIEYDSYKLNQLLYSALNTIDKSLLAAQDGKKDPTTKD VFYEDGVLYEVPAGYLSHIFFLYDKGPKIRVRMRMLNDVTGEIKTESKPYGINNTMIKIS LVVKVNAQVITFLSTSELETKTEIPLVVQIVNGQVPDFTPYSNPSGK >gi|312956640|gb|AENW01000009.1| GENE 96 97083 - 97760 912 225 aa, chain - ## HITS:1 COG:SPy0326 KEGG:ns NR:ns ## COG: SPy0326 COG0569 # Protein_GI_number: 15674488 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pyogenes M1 GAS # 11 225 9 223 224 161 39.0 7e-40 MKKISNRQYVVLGLGIFGSTVAKTLSSYNCEVIALDNDEKCVDRMADIVTQSMMCDITDI NQLREAGVQDCDIAIVSMGSHLEESVMGIINLKELGVPYIVAKAKNKRYMQIFTELGANK VVRPEKEMGEQVAKGVLGKNIIDVVDLDKEYSIVEIPTPPQWVGKSLIELDLRRRFGINV VGIRSYLQEHLNVCPDAEYKIQKEDHLVVIADCKTLDRFDVLDQL >gi|312956640|gb|AENW01000009.1| GENE 97 97773 - 99170 1427 465 aa, chain - ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 8 465 8 445 445 275 37.0 1e-73 MTNFIHSVLGFKKLSPAQKIASSFLLVILSGTLLLMLPISNKNFQFLNWLDALFTATSAT CVTGLSVFTVADQLNWFGQLILLLLIQVGGLGLMTFMAVFILIVKNRLSMNEKIAMKEML NQDRVVNMRKFLLDILYYTLFFEAVGAILISFRMIPRFGLVDGSFKAVFLAVSAFCNAGF DTLGSVSLQEYVHDPLMCLTIMALIVLGGLGFAVWFDIRDKVGPLLHRRITFKKFRHSLS LHTKIVLSVSLFLIIIPGLLIMLVEFTNSRTLGDFNIFEKLMTAMFESIALRTAGFTTIN YAGLKPATDLLMMVVMFIGGSPGGTAGGIKTTTIAVLVIYIISSLKGREHTVVLHRKIGR GIIIRAMGIFFINLVVLFTGIFLLNIVEQKPFLSLSFEAVSAMATVGSSLGITTSLGVGG KLIIIFLMYVGRIGISTLILSLTRNKPNRNSANKVSFPNGNIIVG >gi|312956640|gb|AENW01000009.1| GENE 98 99415 - 99951 684 178 aa, chain - ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 1 178 1 179 179 202 60.0 3e-52 MNLKGTKTEKNLNEAFAGESMARNKYTYYASKAKKDGYVQISNIFEQTANNEKEHAKLWF KLLHDGMPDTVTNLKDAAAGENFEWTDMYARMAKEAREEGFDDIADTMEGVLAIEKTHEQ RYVALLNNIEDGTVFEKAEETLWECLNCGHLHTGKTAPEVCPVCNHPRSYFEVRKENY >gi|312956640|gb|AENW01000009.1| GENE 99 100287 - 102380 2234 697 aa, chain + ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 10 696 8 696 696 682 49.0 0 MAEKHPFDDFGINLFSECVMKECLPHPIYKKWKTATRKEDALDRPTADAIAHAMKTWAMD KGATHFTHWFQPLTGSTAEKHDSFIEPGDHDQPISRFSGKSLIKGEGDASSFPSGGLRAT FEARGYTYWDCTSPAFLRDNVLCIPTIFVSYNGETLDKKAPLLKSAEAISKQATRIVNLF KDKDIKHVNAMVGLEQEYFLIDKRMYLERKDLVHTGRTLFGSMPPKSMDIRGHYFGSIPS RVQAFMTEVDEELWKLGIYAKTEHNEVAPCQFEIAPLFIDANVAVDQNLIIMDVLKKKAD KHGMACLLHEKPFQGVNGSGKHNNWSLVTDDGQNLLEPGDRPHENIRFLLFVCAIIEAVD TYPELLRMAASCYGNDYRLGADEAPPAVVSICMGDELEIILEKLRNGEHEIKPDVETQPY AIANLSYVPKDTSDRNRTSPFAFTGNKFEFRMVGSSRSASTTNIILNSIVADSLRSIADT LQQYKYIDDIRKKSLDICRDILRKHSRILFSKDGYSEEWLQEAQERGLPNIKHYVDSIYS MLDDKAVEMFERNKVYDRLELEARVDILTEEYRKSVKAEVLTLLDISKKDILPALVREIK FYTDAQNSLGTENSYYQRKIKHLCDLLATFDERYHDLKKHMIERQQYPDNMEKAQYLNQV IVPKMEELRAVIDAIEEAVSSDNYPFPTYDDMFISMQ >gi|312956640|gb|AENW01000009.1| GENE 100 102604 - 104277 1984 557 aa, chain + ## HITS:1 COG:SP0496 KEGG:ns NR:ns ## COG: SP0496 COG1283 # Protein_GI_number: 15900410 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Streptococcus pneumoniae TIGR4 # 6 533 9 537 543 297 36.0 4e-80 MTIQNVLSLLGGLALFLYGMHMMSVGLETAAGDRMKAILEKLTSNRLLGVAVGAGITAVI QSSSATTVMVVGFVNSGLMTLNQAVWIIMGANIGTTITGQLIALDASRIAPLVAIIGVVM VTFLKGKRINSIGDILAGLGILFIGMDMMSNSMTPLQDSPVFLNAMTSISNPLLAIALGA GFTALIQSSSASVGILQALALSGLIPLSSSIYIIFGQNIGTCITAVLASLSANRNAKRTT IIHLSFNIIGTMLFFCFIHIFPFVDWMCEITANPAAQIANTHTIFNIVTTLILLPFGNRL AHLAQLLMPIRKEEYQRDEANLPLAFVDVNNIGSVPIAISSLRKEALAMLKMAQTNLIEA LHGVCQEACSIQDIEKREKRIDSINYQISDYMTSVSTLPMNPTASNTINALFKCYADIER IGDHAINILQYTKNEKERLQDVGVIREELMQLEELLDKSFQLLYTNRLESQDESLLKIER IEARIDELTAEFRNRQIERMVHKQIHARDCVIYSEIMTDIERVSDHIMNIIEECRRCSFT LNDEELKDMPLIQECAA >gi|312956640|gb|AENW01000009.1| GENE 101 105081 - 106748 1801 555 aa, chain + ## HITS:1 COG:SP0496 KEGG:ns NR:ns ## COG: SP0496 COG1283 # Protein_GI_number: 15900410 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Streptococcus pneumoniae TIGR4 # 6 533 9 537 543 290 35.0 4e-78 MTFDSILKLFGGLALFLYGMHMMSSGLEGAAGDRMKTILERLTSNRFLGIIVGAAITAVI QSSSATTVMVVGFVNSQLMTLNQAVWIIMGANIGTTITGQLIALDASKIAPLVAIFGVVL VTFLKGKKVNAFGEIFAGLGILFIGMDMMKDAMVPLQQSEAFIHAMTTISNPVLAILLGA GFTALIQSSSASVGILQALAVSGLIPLSSAIYIIFGQNIGTCITSVLASLGANRNAKRAT IIHLSFNIIGTIVFMAFAALVPFVSWMESVTSNPAAQIANTHTIFNIATTLLLIPFGSRL AKLAQVILPVKQEEIEDAGYNIPLTFVDEDNIGSVPIAISSLRKEAMAMLQLAETNLAES MDALCGNAFSLEKIKKREKRIDYINYEITNYMTLVSSLKMNESDSTTCNALYKCFSDIER IGDHAINIIQYSTDEDNKLSSSKYIEDELHQLASLLSKSFSLLSTYSLDSQDECFEKIER IEDRIDELTASYRQAQIERLMEKKVNALDCVIYSEILTDVERVSDHIMNIIQEAKRCNFT LSDEAIQSDPALSAA >gi|312956640|gb|AENW01000009.1| GENE 102 107029 - 107502 527 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402295|ref|ZP_06646433.1| ## NR: gi|293402295|ref|ZP_06646433.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 155 1 156 294 113 37.0 4e-24 MNISSRCILCLLNKEEAGIRACLDEHQKAEYLKDVMRIMLEADPADTMPWISDQIRQLQP PVPRSLPDYAKIKTYFNTILLEMEPMLKNAIEQEVDPLSYALRLSRCGNYIDFGAMDHVD EDILRSLLKQVKEETLDASVYQRFLSQAANSSSALSL >gi|312956640|gb|AENW01000009.1| GENE 103 107438 - 107914 408 158 aa, chain + ## HITS:1 COG:MK0812 KEGG:ns NR:ns ## COG: MK0812 COG1578 # Protein_GI_number: 20094248 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanopyrus kandleri AV19 # 15 137 153 277 304 95 40.0 3e-20 MQVSINASYHRRQIAAVLYLCDNCGEIVLDKLLILQLQKHFPHLQITVMVRGGEVLNDAT MRDVRQIHLDEVCPCTSSQVPLAGCDLRHIGEDARALLASSDMIIAKGQANFESLYGCGL PIYYLLLCKCDYFCEQFRMHHLKGIFAYEKTLEISSAK >gi|312956640|gb|AENW01000009.1| GENE 104 108108 - 108632 179 174 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237672173|ref|ZP_04532143.1| acetyltransferase, ribosomal protein N-acetylase [Brachybacterium faecium DSM 4810] # 14 159 7 149 172 73 34 9e-12 MLKTDRCSIYEIKESDLADVRILFTDDEVRTYLGGAYDKARAEEKLRNIMMGIDNQGFTV RRTSDSTLLGLIEIGPYHNGMEQEISYQFAPEVWGQGYAKEAIHAVLVFLSEQGTLESIL AETQKKNIRSCRLLEALGFKMRESLIRFRQPQVVYMKRLCKSIKASKAFNEMLE >gi|312956640|gb|AENW01000009.1| GENE 105 108688 - 109905 1543 405 aa, chain - ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 9 383 2 383 383 145 29.0 2e-34 MEAIYMKFRLTEDMRKKIWLYVIVIAIGISIYFAFDKIDFIIRSLRRVCSLTTPFILGFA IAFLLNKPMELIEVKLLGRLRMKPQHKRSIAAVLAVLLGIIIVCAFLALLLPQLFDSIFS LVKAFPGYVEDFQKFALDFVEKYAIDTQQVTNYITDTDFFEKLTGFVTDALPQMAKATYA FGSTLLNILLSIMAGLYMLIDKERLSGYAKKINYALFPKEISEYLHRMVLASGDIFNNFI VGKAIDSLIIGILCYIGSLIFQFPYALLLSVIVGVTNMIPVFGPFIGAVPGIVILFIIHP ITALYFALFVFALQQFDGNILGPLILGDKLGLPSIGILFSVCVGGGLFGIIGMFIGVPCF AVIYMAVKEFVNYRLKKKEIDLESISREMKKEALEIEERMEQLEE >gi|312956640|gb|AENW01000009.1| GENE 106 109960 - 111609 1953 549 aa, chain - ## HITS:1 COG:alr2485_2 KEGG:ns NR:ns ## COG: alr2485_2 COG0171 # Protein_GI_number: 17229977 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Nostoc sp. PCC 7120 # 222 525 3 271 295 133 33.0 1e-30 MKVAVVTMHVKQGKCEENVSYMKQMIQKAREEQADMIVFPQNAVSGYLLGDQWLDDDWCR YVDSFNEALLAESEDIAIVWGNIRYRNRRRFNAAFFAYRKQTHMRVKRNTPYTDDARYFE ENPINSAIEFKGHVFALNFGREVQLTDININLDAAMYELDHTYSLKGNVIYANALGMQNS GKDVVVMAGGSGVRMQKKIIYQAAWFHEGMQIVDLAETREVESTQPQLLDALLLGIRDFD AQIFNRAIPWIVGMSGGLDSSVTAALLVAALGPKRVYGYNIATRHNSTTTISNAAAEAKA LGIAYQEGNMETLVQASVELFHKEYGYAVEAMPSLVMENVQARSRGYLLSGFAGILGGVV VNNGNKVETALGYCTLYGDSIGALSLIGDLTKVQLFDLSKALNAHFGKEVVPLNLLPCVH EHGMDWTMPPSAELKDAQFDPMKWFYHDYLIEHLGTDLSLRSFMESYADGSIWKQDIARW MKYYHLDDPDTFLKDLEWLLTTRAKNAFKRLQLPPLLSVHKRTLANTREAQMREDRYVFE ELKQRILND >gi|312956640|gb|AENW01000009.1| GENE 107 111733 - 112464 845 243 aa, chain + ## HITS:1 COG:SA0490 KEGG:ns NR:ns ## COG: SA0490 COG0566 # Protein_GI_number: 15926209 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Staphylococcus aureus N315 # 1 240 1 242 248 97 29.0 1e-20 MEQYIVEGNISVKAVLLAQKRDIIKIIVDEKKKDRDTAFILRQAAQRNIPIEQNSRQAID ELAQGKTHGGLLALCGERRFQTLQAVAEKDSVFLALIEGVEDPFNFGYILRTLYAAGCDG VIIPPRNWTTAAGVVTKASAGASEYLNLIVATDMEALLHEMKQADIQLICAQRKDAISLY DYAFPLKLCLAIGGEMRGLSKHVQNHSDQNLFIPYRQDFRNAMTAAASTAIFAFELVRQK TAD >gi|312956640|gb|AENW01000009.1| GENE 108 112631 - 113371 782 246 aa, chain - ## HITS:1 COG:lin1914 KEGG:ns NR:ns ## COG: lin1914 COG2365 # Protein_GI_number: 16800980 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 1 182 40 226 298 74 31.0 2e-13 MRTARRMRLQGAGNVRDLGGYPCGETITAWQCCYRSDMLNNLTQEDWKKLQEADIQLILD LRSKTEQIQAPYDSERYGIARVSLPFMKEEVPLADSLDEQAQKRFLDSMKLDYVDMVRAV PEAVCAALRHIRNTRKAGHAVLFHCTAGKDRTGILAALLLKLCGVCNEDILADYQVSATY NALGVNRMLPADVMAIPAVRALLDSTPDMLQPLLTMLDEAGCFSYLKSIGMRQDELEELS ALLQEP >gi|312956640|gb|AENW01000009.1| GENE 109 113368 - 113694 323 108 aa, chain - ## HITS:1 COG:BS_yqhL KEGG:ns NR:ns ## COG: BS_yqhL COG0607 # Protein_GI_number: 16079510 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Bacillus subtilis # 8 92 29 111 126 63 44.0 6e-11 MFGFSFDKTMEEVKQELDAGKDIQLIDVRETDEYRDGHIPGADHLALSELEDRAAAVVAK GKPHYLYCRSGQRSRTALKKLRALGYDELYNIGGIVHWPYEQKTGSQK >gi|312956640|gb|AENW01000009.1| GENE 110 113704 - 114048 523 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401584|ref|ZP_06645726.1| ## NR: gi|293401584|ref|ZP_06645726.1| putative amino acid permease [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 114 1 116 116 119 68.0 4e-26 MDDVKRLGTPLLIIVLSAFLTKLVETWLKGGFVHTLLIIIMVASLFMFGVSLNRKKRSNA VFRKVVAIVIVLLLLFMQLGYLDLAIVNRWFAYLGMGSFYINMLYIFCGYLFVD >gi|312956640|gb|AENW01000009.1| GENE 111 114050 - 114487 594 145 aa, chain - ## HITS:1 COG:BH1545 KEGG:ns NR:ns ## COG: BH1545 COG0652 # Protein_GI_number: 15614108 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Bacillus halodurans # 5 142 4 141 145 183 65.0 7e-47 MIYHGTITMENGAELPFELYPEDAPRTVENFVKLVKEGYYDGKTFHRVIKNFVSQGGCPY GTGAGDLGYTIPCETANNPHKHEDGSLSMAHRGKDTGCCQFFICHCPQPHLDGVHTVFGK VTDNLGAVRNMRNGDVMKKVVIEEV >gi|312956640|gb|AENW01000009.1| GENE 112 114639 - 115604 1157 321 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401586|ref|ZP_06645728.1| ## NR: gi|293401586|ref|ZP_06645728.1| hypothetical protein HMPREF0863_01868 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 320 1 320 321 332 49.0 2e-89 MHSCKVQSHPAAHVQPAEYEEQRKRISLGLFPSALLKAQEQVMGKEYAWELRYYQREFSL PLSRNIFGLFTIPVYINHVRAVFVVDTGAQISGIKSEKIAQLKLKKTGGKLQIGSIGGTR RDMQGLVADSVQLGGLEVLNMAMIALDSSDFSLRFGNIDLFGFDGILGWDILHQLDFELD DVAKQFIVLKNRFRIPYPNMLKGSFPCFLVKRADQEISLFGFDSGSRVSWIGEQAIQEHA LTVVHEGSAMGFGVHGLERMDLKIIKQWTLYLDKAEITLKDTMTGRVRLFDDFAFDGVFG NEIFRKRRIRILNSANMVLLA >gi|312956640|gb|AENW01000009.1| GENE 113 115883 - 116743 1099 286 aa, chain + ## HITS:1 COG:no KEGG:Clos_2610 NR:ns ## KEGG: Clos_2610 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 286 2 287 287 325 59.0 1e-87 MQTNKASLPVMSVQGKVDHPIMSGNGYRVGYDGYGRIPMATGGIIYNYKIGDSCMGIAGD HIEPGVSLKNPVEKENNALQAFACIGNRAKVISGDAKGKEGYVTGKHGGIDHVMVYFDEE TLELMTTEDKVLIKACGQGLKLMDHEEIQLMNIDPALFEGLGIVEEEQGIKIPVVTCVPA YLMGSGLGSATTMLGDYDIMTQDAQANKEFGINELHFGDLVMIQDHDNHNGPHYRRGAVS VGIVVHADSYTSGHGPGLAVIMSSRCGSIEPILDPNANIANYLHIK >gi|312956640|gb|AENW01000009.1| GENE 114 117022 - 117723 963 233 aa, chain - ## HITS:1 COG:YPO1163 KEGG:ns NR:ns ## COG: YPO1163 COG0670 # Protein_GI_number: 16121459 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Yersinia pestis # 12 232 13 235 236 129 36.0 5e-30 MFERNEDYFEPQYAATSLQKHAVRTFGWMTLGLLVTTATAFAVYSTDLIYYIYTMRFAPL ILIAAQFGVVIALGARLMKMSATSAKILFLAYSMLTGITFSTLALVYLPGTLAMAFLMTT VYFGSLAVIGYTTKMNLLRFGPILFGSLLALIITEVIMMFMGADTSTMLMSAIGLLIFTG LTAYDAQKMKALYASYEGDEEMLKKLSIYSAFELYLDFINIFLYILRFVGNRD >gi|312956640|gb|AENW01000009.1| GENE 115 117800 - 118552 906 250 aa, chain - ## HITS:1 COG:BH3665_2 KEGG:ns NR:ns ## COG: BH3665_2 COG0860 # Protein_GI_number: 15616227 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 57 247 1 180 180 100 34.0 3e-21 MQKNFVQRHALFFSVIVFCFVIVPFIRNAYAQEKADKKQQAETLVIRTQKQAEEKKVTKR RVVLDAGHGGYDDGSVAADGTKEKNITLQLTKKIGKLLEKQDVDVVYTRVQDKVSWPSDN EKDLLERSRIANTSKADYFISIHMNFSDTAQDSARGAEIWVRESDAKSRALAKQVNKQLT GLKGMKSRGLKDEADAPLSLMEYTDIPTILVEAGFLSNDDDLSYLKSEKNQEAMAKAIAD GIVHAFDKES >gi|312956640|gb|AENW01000009.1| GENE 116 118567 - 119394 1058 275 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401592|ref|ZP_06645734.1| ## NR: gi|293401592|ref|ZP_06645734.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 7 273 5 272 277 234 48.0 3e-60 MKELYLQKVTSQDMVNKIRGMRSEEINTYLTELGCTLTCEDIRGRLEATYNDLAVADAIF ETQKIDDTHATFPKAFIDEAVLEIARREDFGFTHYGLISDAILDLMEQGSEQVAADLLEQ FRLLFKTAKRFHIDSLEAMMYQVNDGLDMIGVVTFLLDILMEQGRRDKEQYRVLIAFVDK FLHVFSKTSDFFRVGMQYEQAKAYIALKSKKGEQMFQKLLATHSDVTDVVLHYALAYLDD DEKRTRRLLERYASRLDKESPAYEEIQELKKDVYN >gi|312956640|gb|AENW01000009.1| GENE 117 119846 - 120313 397 155 aa, chain - ## HITS:1 COG:CAC2825 KEGG:ns NR:ns ## COG: CAC2825 COG1671 # Protein_GI_number: 15896080 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 11 141 3 135 148 107 39.0 6e-24 MTRIWSSMSDIYIDADGCPVIEETLQAGEDFGFPVILVCDTSHVFPYEHVVILMADKGRD STDFLLLSHVKKGDIVVTQDYGLAALVLSKEGYPISCNGVPFTTENINRLLTMRHVGSVE RKHGNYGNHAIKRTQQDNERFLDGLYALCESLQDK >gi|312956640|gb|AENW01000009.1| GENE 118 120285 - 121484 1612 399 aa, chain - ## HITS:1 COG:TM0356 KEGG:ns NR:ns ## COG: TM0356 COG1171 # Protein_GI_number: 15643124 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Thermotoga maritima # 1 396 2 400 401 340 51.0 4e-93 MDISNIYDAKEVLKDVISKTPLVHADKLHENLWIKAENLQGTGAFKLRGAYHKLHSLTQK EREKGVIAASAGNHAQGVAYSCMKMGIKGTIVMPKTAPLSKIEATRSYGVAVELQGDTFN DAYEYAKNLQEITGAVFVEPFDDEYVIAGQGTIGLEILDKLSDVDTVIVPIGGGGLISGI AVAIKAMRPSCRIIGVQSEHAPSMKQSLEKKEIIKLQNVSTIADGIAVKTPGKLTYKLCS KYVDEVVTVSEEEIAAAILTLLEKMKMVAEGAGATSVAAAMFGKVDLKHHKCVAVLSGGN IDVNLLSKIIDLGLMKTGRKAVINMNVMDKPGNLSRMIELISRTGANIISVNHNRIQNAM LFNQCRVGVIIETNDNKHIEDVLAILKNNGYDPHLVEHV >gi|312956640|gb|AENW01000009.1| GENE 119 121792 - 123492 1942 566 aa, chain - ## HITS:1 COG:no KEGG:CLM_1301 NR:ns ## KEGG: CLM_1301 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A2 # Pathway: not_defined # 1 564 1 577 579 486 45.0 1e-136 MKETLYLTKELAILNYSAGYAHSGDQLLNSSTFSNYVHNYLDYLKADNEALYFYALNGKT TREATFEILKLFRMLRVFKAEEVDSPYLNDKAKLLEFVEEMYNFWKKHQRFSVMSIGQGN ALQDLTFVGADSSFTSLILGLYRNIEEQIMGRKNRVYRQLQAGTNASIAVKNIDNPKLSP KYDALKDIEFIQSVMLRTPMILHPKSNKRTGMFTERDTNPITEFTGTPDEWFCYPCKVGS LLAFIYFHRDFISSAVSLANLFELANEDECRKKPDLICLFGNQDDKEQTTFHYDAEDDVW IGCVSYHERIEYFGYLKKMTLTLHNVRKMQKGWLPIHGAFVNITLKSGKRKGIMLMGDSG AGKSESIEALKIAGADVIMDIEVVFDDMGTIHLEDGVPYGQGTEIGAFIRLDDLDPGTPY RDMDRSIFMNPESSNNARVITPAAPYEIVAMNHRIDLFAYANNYDDKLGLHRFDTLEDAK ATCKEGKRMAKGTTQEVGISTTYFANPFGPMQQQEVCEPLIDQMFVALRDSGCFVGEIYT HLGLDKENRDGINIAAKELLDFIEKD >gi|312956640|gb|AENW01000009.1| GENE 120 124024 - 125718 2297 564 aa, chain - ## HITS:1 COG:CAC3178 KEGG:ns NR:ns ## COG: CAC3178 COG0442 # Protein_GI_number: 15896426 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 564 1 564 570 555 50.0 1e-158 MKLSKSYFYTLRENVKDEDSTSGNLLVRAGMIKKSSSGIYMIMPMGKRVLKKIEEIVREE MDAAGAQELLMPAMIPEEIYEKSGRREAFGSNMFALKDRYQKNYVLGPTHEELFTMAAMM KGSSYKDFPYNLYQIQTKFRDETRPRYGLIRVREFIMKDAYSFDIDEAGLQESYMKMFQA YKNIMDRCNLNYKIVKADTGAMGGSLSEEFQAITEIGEDVVVTCEGCDFSSNLEITEVID TGRPSDEEALDMEIVETPDAKTIEDVAAFFQKSVNDFVKTLIYSVDGKTMAFLLKGDREL NETKVLKLLQANEMELASFDEVERVTHARVGFAGPVGLECPIIMDREVANMKNFIVGANK TDHHIKNVNLKDFTVETVADIAQVHEGDICPKCGKPLKFCKGIEVGNTFKLGTKYAKALG LEYQDVNNKLHPVEMGCYGFGLERCMAAIVEQHNDASGIIWPTSVAPFEVAVVVVSSKDD EQMRIGNELYEALKKEGIDVLLDDRKERPGVKFKDMELIGIPYRITVGRGIKDGNVEFRA RTADESSDVSLHEIVDMVKKELQK >gi|312956640|gb|AENW01000009.1| GENE 121 125812 - 127041 1280 409 aa, chain - ## HITS:1 COG:BH1274 KEGG:ns NR:ns ## COG: BH1274 COG0826 # Protein_GI_number: 15613837 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Bacillus halodurans # 2 401 17 419 420 389 48.0 1e-108 MKKIELLAPAGDLERLKIAVLYGADAVYLGGKQFSLRSRASNFGLKEIAEGVAFAKEHGA HVHVTVNMLPHEEDLHGLKEYLIELERIGVTAIIAASPGIMMCAKKWAPKLEVHVSTQHS STNSSAANYWQEKGMDRVVLGREVTLEEIKASAAHTQVPLEVFIHGGMCISYSGRCVLSN NMTGRDANRGGCAQSCRWKYRLYEGDRALHDEQDLFSMSSKDLMAAKYIPDLITAGIASL KIEGRMKSAYYIATLIKTYRMLIDEIYAEGGRLSDKRMEWYYNELAKAENRPTGCGFYEG MPSFHGHLYGVNGAGVTQEFIAYVLDYEEESGMATLEVRNNFRGHIAAEVFGPTISATRF ELQELYDMDGNLLDVAKTPMQKIRTHVPLRLEKDAMIRKVVTRNRSGIY >gi|312956640|gb|AENW01000009.1| GENE 122 127050 - 127943 1209 297 aa, chain - ## HITS:1 COG:BH1273 KEGG:ns NR:ns ## COG: BH1273 COG0826 # Protein_GI_number: 15613836 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Bacillus halodurans # 3 293 5 307 309 135 27.0 9e-32 MVDFIATPFAFGDIEKLKTAGAQSVQIAVPFFSARGAACFPIEELPDIKAECVRCQISMY VLVNRIFVEEELERLRDFLKLLKELDVEGIYYGDEGVLYEAARLDMKDRLIYNPDTLITN AMDMQYYLDEGIRMATISKEITLQEMCTVARDVQGECEVVLHGRLNMMHSKRKLLSAYME FLGKEEAVTDNHQLYLMEETRDDHMPIVEDALGTHVFTGFTLVSFEEIRELYEAGVRHFR IDGIFHDIEYVCEALRLYQDVLKGVRDGRQTYQEYEKKYKEDHVSHGFYYTKTSKVK >gi|312956640|gb|AENW01000009.1| GENE 123 128818 - 130215 1797 465 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402059|ref|ZP_06646198.1| ## NR: gi|293402059|ref|ZP_06646198.1| high mobility group box protein 1 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 465 1 460 460 387 62.0 1e-105 MAKTTKKKTLTKKTAKATAKAAAKTESKTAQEQLKLTAEPEAKKITAEKEPEKLTTKKIE KITTAKEAEKLTTAPAPEKIETKETVKLATSAAKTTEKAEEKKPTEAKAETKKKPAAKKT AAKKTTKKEESKEEAVKAEDKPVKKAAKKTAAAKKAEPTAKKAVKKTEEKKAEKKPAAKK AAAKKAAPKKADKEKLEAYAALSLDEAIQKAQAMGVQHVYEDYTRFLLDEADSKQIAKNI IDGNALLEKGFTYDKDGFDTDLISVVLEKVADTMDVKAMDYKELKKDITACLKAEMTADA EANAAEYLKEFKVCEKLLMIGQRKNITDAAIVSDLIGADVDAFVAHFFQFAYAILPGWQY DDVKFYEDFAFAVLSQYSDLYEKYQLNILLDVADLYIKHGDFGHGDECYGYILRDNQIKD YIYYRFASVYEDIDFNKAKALAYESLQYVDGRYTYYQNIMDIINK >gi|312956640|gb|AENW01000009.1| GENE 124 130529 - 131824 1257 431 aa, chain + ## HITS:1 COG:CAC2433 KEGG:ns NR:ns ## COG: CAC2433 COG0265 # Protein_GI_number: 15895698 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Clostridium acetobutylicum # 66 410 66 432 433 194 38.0 2e-49 MEDFEVYEEHNEEDVKQNSFNEKSENTEMNMDDAAAGAPLQKEKKPSFMKRHKNACIISG CLLISIGGGFGGATLAYQLSKSNGNGTVLYQAVEKTNSSKSNTANATSMSVKDIANEAME SVVEIKTESVSTNEFFQQAVQSGAGSGVILSKDGYIVTNNHVIDGASKIKVTTKDGKSYD AKLIGNDSSTDLAVIKVEASNLKPAVLGNSSKLEVGDTAVAIGNPLGELGGTVTSGIISA LDREVTIDNQTMHLLQTNAAINPGNSGGGLFNDQGELIGIVNAKSSGSNIEGLGFAIPID RAKDVITNLIENGYVKGRASLGVTLTLGTSNNPFSSDTSTQVYIASVVEGKAADKAGLQA GDQILKVDDKDVESISDVKTVVNSHKAGETMKITVLRDRSTKTFTVTLGEADNTTSSSDE GTSRQTPNQNR >gi|312956640|gb|AENW01000009.1| GENE 125 132106 - 133578 1496 490 aa, chain - ## HITS:1 COG:sll1676 KEGG:ns NR:ns ## COG: sll1676 COG1640 # Protein_GI_number: 16329392 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Synechocystis # 2 466 4 476 505 341 40.0 2e-93 MERQTGILMPISALPGNQGIGDFGKHTYRLIDAISKQHIRIWQILPLNPVGYGNSPYQPF SSYAGDEIYISVDTLADYGLLKQSSIRNYNKFSEKVDYDGVRAFKAPYLKKAYKTFLKMQ DTFAQEYQLFCSTAPWLYPYAVFITLKKHNQMASWTQWPKEQREWIRNRRFSLKEFEEEI RYEQFLQFIFYKQWNQVKAYANAHGVEIMGDLPFYVGLDSADVWQNQEDFLLDPQGNPSH IAGVPPDYFSDDGQRWGNPIYNWKQMKKDHYDFWMERLAWNQQQYDIIRLDHFRAFDTYW KIPASCPTAKDGEWIMGPSYEFFDEVFRRFPEIRLIAEDLGDLRRQVGKLRDHYNLMGMN VISFELQPKLLKKPRKEHIVLYTGTHDNDTLEGFYQLLTQNRRIALRRFFHNCGYDNRMF HELVIRYCLDSAADVVILPMSDILGLKSEGRLNTPGTIGSPNWEWKVKNLKEFYALLPKL GEWMQAGGRS >gi|312956640|gb|AENW01000009.1| GENE 126 133587 - 135845 2612 752 aa, chain - ## HITS:1 COG:SP2106 KEGG:ns NR:ns ## COG: SP2106 COG0058 # Protein_GI_number: 15901921 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 6 751 5 751 752 838 57.0 0 MTFMRQELIQDIRNAAGCKPTAGTLYKAINRAVRKQMAKLEPVVSKRKLYYISAEFLLGK MLTSNLIHLHALEDVKTLVGEYGCTWKEIQDIEQEPSLGNGGLGRLAACFLDSIAELNLC GDGIGLYYHFGLFEQRFLNHKQTELPNAWIDTVSWFERVPVDFQVKLPCCTLQPVRYDMD VIGFDGKKNRLHLFDVESVEEGIVKEGIQFDKTDIRRNLTLFLYPDDSDEQGRLLRIYQQ YFMVACGAHMILEEQKQLGHDLHRLYEHAVIQINDTHPSLIIPELIYQLMQEGIRMKEAV RIVEKTCAYTNHTILAEALETWPMSYLETVVPHLCGILQALDTAADQRCSAAGVALIDAD NRMHMAHMDIHFGKSVNGVAALHTEILKQSELHAFYELYPKKFNNKTNGITFTRWLHACN TQLYTYLMELLHMDSWQDERLAELHAYAQDADVIAHLQDIKQEKKREWCTHIRNKQRVAI NPNSIFDTQVKRLHEYKRQQMNALWIIYKLKEIRKGNLPKRPITCIFGAKAAPAYTIAKD IIHVLLCLQDIIEHDARVSPYLQVCFIENYNVSEAELIIPASDISEQISLASKEASGTGN MKFMLNGALTLGTRDGANVEIADLVEEDNIYIFGKSSEEVIAHYEKADYCSRDYYEQDAL LQELVDYLIGEEMLATGDRKSLHRFYQELLNKDWFMTLLDTREYIACKEQMLKDYENRKL WGQKMLHNIACSSFFSSKRTIEDYDRDIWNLG >gi|312956640|gb|AENW01000009.1| GENE 127 136029 - 136640 571 203 aa, chain - ## HITS:1 COG:CAC2605 KEGG:ns NR:ns ## COG: CAC2605 COG1309 # Protein_GI_number: 15895863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 185 1 181 194 94 29.0 9e-20 MEKKQTRKEQALQTRSNILTVCTGLLREHTFDELSISMICREADISVGAFYHHFKTKSDI IVELYRDVDDVFVNDILPVCRQLPPLEAILQYLCGQCGYAETMGIDSIKNVYKAQIDNGN TFFASNARGLPDGLRCLLQRAVRECCLKTDTDIEKLLEELLIMSRGVIYYWCIRNGEINV RDYIYHMAEGYLQAYLANPSISL >gi|312956640|gb|AENW01000009.1| GENE 128 136939 - 138855 2129 638 aa, chain + ## HITS:1 COG:CAC3371_1 KEGG:ns NR:ns ## COG: CAC3371_1 COG1902 # Protein_GI_number: 15896613 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 1 372 24 398 401 441 55.0 1e-123 MAPMGPVGYADSFGGFNQRLQDYYVERAKNNVGLIITGICSVDMSIEGIPANGLPCPTSN PLAFIHSTYSMNDRIHAYGSKIFLQLTGGLGRSALPGFTAKHIAPSENTNRFDPRITHRE MTKEEIMNLIRRFIESAAIAKKAGFDGVEIHAVHEGYLLDQFAIALFNKRSDEFGGSLEN RLRVATEIVRGIKKVCGPDFPVSLRYSLKSCMKGLRQGGLPQEEYSEVGKDIEEGIAAAK ILVNAGYDALNVDAGTYDSWYWNHPPMYFEDGMYREFGRILKKEVDVPIILAGRMDDLDM AVEALKDCCDIISYGRPLLADAEFAEKVRTGRTDEIRPCLGCHEGCLGRIANGPICCAVN PACGREEIYGITAACTKKTVLVIGGGVAGLETARVCALRGHSVILCEKSDQLGGNLIPGG VPHFKRYDRKLISYYKRQLELLKVDVRYHHEVTPDTIDSYHADVIVCASGSTPRHMEVEG PLPVASADEVLLGQKNISGNVVIISGGLVGCETGIWLTQQGSHVTVVEIADEILGGAGAL PHMNHFMLEDLITYHRIDVHTKSSVVKSSDEGVVISTPQGEKLLPADGIITSIGYIANNR IYEELKDMDIPVYNIGDSNRVHNIMYAIWDAYELARNI >gi|312956640|gb|AENW01000009.1| GENE 129 138936 - 139733 1168 265 aa, chain - ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 1 265 5 269 269 217 49.0 2e-56 MTITNPYILAAIGTGFTFLMTALGAATIFLIRKEMKQGMQSAFLGFAAGVMIAASVWSLL IPSMEQAKELGMPEWLPAGGGFVLGGLFLLALDKALPHLHPGSDEPEGPKSSLKRTTMLV FAVTLHNIPEGMAVGLSFALSTSAGASTTLAAAIALAIGIGLQNFPEGAAISLPLYKEGC SRAKAFLYGALSGIVEPIAGIATVAIVGGATIAMPWLLSFAAGAMIYVVVEELIPEANLD AHSHAGTYGVMIGFLIMMIMDVALG >gi|312956640|gb|AENW01000009.1| GENE 130 139912 - 140103 78 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRNFLSGNGQDTSHKVKKGIDIIENGIDPFCMYVYPFSDSLTEHTRFHCMKMKRYACFSA MAK >gi|312956640|gb|AENW01000009.1| GENE 131 140073 - 140570 647 165 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402064|ref|ZP_06646203.1| ## NR: gi|293402064|ref|ZP_06646203.1| hypothetical protein HMPREF0863_02344 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 163 5 167 168 237 76.0 1e-61 METKEIIKHALKDYQNITGLRSYVVYDNTVIQSASEKNYFCKCLKSSSKALKKCEECTEE TYENARKIDHECVYSCHAGLIKWAVPVQRGDFHCVIVSEGVLAMKQMEDADKWAKYLSRE YQLDESMLLKNFKVIQTMDEDQMNASIELLKDLLSYHFAMAEKQA >gi|312956640|gb|AENW01000009.1| GENE 132 140654 - 141328 575 224 aa, chain - ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 3 191 2 206 237 128 34.0 8e-30 MNISYITHSCFLVELDSCYLLFDYYRGTLPRMKEDKPLYVFASHAHADHYSTRIFKLKHP SITWILSSDIAAAHPHIQVEAGKCYTVNDLQVRTLASTDEGVAFLVTAEDNCIYHAGDLN WWDWGDENTPQEHAEMKERYFRELQSIKGMHFDVAFLPVDPRLKERALKGARAFLQYASC DLLVPMHFWKDTAVFTWLRHSEIQNIEAMQLWLGFQELETFTKV >gi|312956640|gb|AENW01000009.1| GENE 133 141461 - 141964 575 167 aa, chain + ## HITS:1 COG:TM0564 KEGG:ns NR:ns ## COG: TM0564 COG1853 # Protein_GI_number: 15643330 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Thermotoga maritima # 24 167 16 159 159 91 35.0 7e-19 MELKEIQTSQLHSDAFTMIGKEWMLVSAERDGVVNTMTASWGGMGILWNKKVAFVFLRPQ RYTKEFIDQKDCFTLSFYDEEYRKTLSYLGTVSGRDEQKIEKAGLHTAFINDAPYFTEAN TVLVCRKLYAQEMREDCFLDAALIEKNYPQKDYHTMYVAEIEHVYQK >gi|312956640|gb|AENW01000009.1| GENE 134 142490 - 142723 343 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402067|ref|ZP_06646206.1| ## NR: gi|293402067|ref|ZP_06646206.1| hypothetical protein HMPREF0863_02347 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 76 1 76 77 92 71.0 1e-17 MKHTVRLQEEISKHVSARKHITTQIEYFCDSEEDTKHLTQNITEVLTKHLGDSRLAKITY DYHPAEKKVEVVIIEHQ >gi|312956640|gb|AENW01000009.1| GENE 135 142784 - 143791 1119 335 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRKRICEDCGNKCNDEYCPICGRKTKVYNEASRQEDTLYDAAKYRTTADTKKAESGVFE EKKERIDDSERVREHRYNHPNAKNLRLRMEKGGHPYYEHIKGGGAQKNIRLVQLFSLLLI IGIVVAVAVVAMTSFRDEPSAFTDNEDIGDSFVSGNISKHEVEEKVSLTCMVKDYEYAEG VQTVIVENNSPYFVKTDLIKNGEPVGYLNLPSHSKTENLIYDENLSSCENKIYGVYEMDI EKPQVAYTFTDTYVEDYTLQARIDVKEAIDEKQLAVLMRYLYAQASESFLYELYEVNIYQ GNRYLFDSYFDFTRGTIKFNSVEASFTMEDIVIEN >gi|312956640|gb|AENW01000009.1| GENE 136 144188 - 144751 770 187 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402069|ref|ZP_06646208.1| ## NR: gi|293402069|ref|ZP_06646208.1| hypothetical protein HMPREF0863_02349 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 186 1 186 187 324 86.0 2e-87 MKQVMYGIEIADVNDFGGWVGYEPVREDVAKTLNHHMYLFFQNEYHINQFAEGRKFVINV KDDSLEKVIGNARILKAIVEYGTPLSMNGYEISAPAYARNIVKPLSRATGFIPENTIYTF SDAHYKDMKTDFNFISDLMTRTSIEAVDILLGSISFVNKNLLYHYPHYFIIGDSQIKVLD DDYQIGG >gi|312956640|gb|AENW01000009.1| GENE 137 144793 - 145080 248 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSATIRTAIASMVLGIVSVSFCVPAILFSFFRWLPGMLIVLVSLACGILAIVMGARARV LRPAGRAIAGLVLGIIGTSISGLLLLCLLLLCIAF >gi|312956640|gb|AENW01000009.1| GENE 138 145163 - 146527 1695 454 aa, chain + ## HITS:1 COG:jhp1245 KEGG:ns NR:ns ## COG: jhp1245 COG0114 # Protein_GI_number: 15612310 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Helicobacter pylori J99 # 1 454 1 459 463 588 62.0 1e-168 MKTRMEHDSMGEIAVEEDKYWGAQTQRSYENFKIGDEKIPLSMICAFAHLKLACAKVNYE LGRMEERKLDAIATACDEILCGRLDAHFPLSVWQTGSGTQSNMNVNEVIANRGNEIAREQ LLHPNDDVNKGQSSNDTFPTAMHIAAIEALRKQLMPQLEEMIHALKRLEKENQHIIKIGR THLQDATPLRFSQEISGWRGMLENNIDMLQKAIDSLRKLAIGGTAVGTGLNTPQGFGDLV CERLSDQLATQFISDPNKFHALSAKDDICFAHGALKALAANCMKMANDVRWLASGPRCGL QEIRIPENEPGSSIMPGKVNPTQCEAMTMVAVQVMGNDAAIGFAASQGNFELNVFMPVII YNFLQSVTLLSDGLRSFRIHCVEGIRANEEKMAEYLQHSLMLVTALNPHIGYENAAKTAK KAYQDGISLKEACVALGFLSAEEFDAYVIAENMV >gi|312956640|gb|AENW01000009.1| GENE 139 146897 - 148069 1398 390 aa, chain - ## HITS:1 COG:BH3168 KEGG:ns NR:ns ## COG: BH3168 COG0281 # Protein_GI_number: 15615730 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Bacillus halodurans # 5 389 6 391 410 433 60.0 1e-121 MDYAKEALRLHAEWKGKLDVNPKMEINTKDDLSLAYTPGVAAPCLEIEKDINKSYELTGR GNLVAVVTDGTAVLGLGDIGPEAGMPVMEGKCVLFKEFGGVNAIPLCIKSKDVDEIVHTI ALLSGSFGGINLEDIAAPRCFEIEAKLKKLCDIPVFHDDQHGTAIVTAAALLNAVKLTGK NMGDLRIVINGAGSAGIAIARLLLNMKFGDVILCDSKGSVYKGREGMNAGKKEIAELTNK GMLKGSLADAMKGSDIFIGVSAPDVVSEAMVASMNEKSIVLPMANPVPEIMPDKAKHAGA FVVGTGRSDFANQINNVLAFPGIFRGALDVRASDINEEMKVAAAYAIASLVSDEELSVDY IIPSALNKEVGAVVAEAVAQAARESGVARI >gi|312956640|gb|AENW01000009.1| GENE 140 148250 - 149134 765 294 aa, chain + ## HITS:1 COG:no KEGG:Pecwa_4583 NR:ns ## KEGG: Pecwa_4583 # Name: not_defined # Def: metallophosphoesterase # Organism: P.wasabiae # Pathway: not_defined # 14 282 37 324 388 89 25.0 2e-16 MDKKRTAFANRICNEKSYLQMELLSDLHIAFPRQNAKLEAALEDIWKRKVRHVAICGDLT NNGYPFQMKQVLTQLQEFPIHILPALGNHDLYNLFSRTQNRIHPEYRKLLPRHAESIYFD RYVEGIHFYILNSERPSKNDMILTKKQVDWLLNGLKQDDKNKPVCIIAHQPLQDTHVMSE DHTGTQQHLQVDMLKDVHPHIIFISGHLHNSFALCEVLARRNLFLINLPSFVRIEHGDSQ DQIGFNLRFYADFLYLRTRDYKNRRWIVSHEYILDMKTSEVISFDADLLPSEPL >gi|312956640|gb|AENW01000009.1| GENE 141 149094 - 149309 256 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNELLVIAWLLLPASALLIQYYLIQKRQNLLWILPLLSLAVTFFIGLAAVLYAFFLIIFT KVLMAEDPHQS >gi|312956640|gb|AENW01000009.1| GENE 142 149399 - 149929 565 176 aa, chain - ## HITS:1 COG:no KEGG:Elen_1942 NR:ns ## KEGG: Elen_1942 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 9 160 17 170 181 123 40.0 3e-27 MIEKRKAPAFHCPRWEELPDMDLYMDQVVTLLNEYLKPFHAKDQEKMVTSTMINNYVKHG IVSPPVKKKYTKNHVAYLMVVCILKMVYRMDEISKLIRVQIYKYPIDQAYNYFCAELECC LKCIFAHKKVHHAPSDDEGSLVVDLIRNTVQAVAYTIYVRHELEHPQIMIQEESDT >gi|312956640|gb|AENW01000009.1| GENE 143 150042 - 150203 65 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRSWLKASVFLCLPNSMKAEDGLLYCFFLFDKRMAVAGEYELNFPYFIGFQL >gi|312956640|gb|AENW01000009.1| GENE 144 150253 - 151248 1098 331 aa, chain - ## HITS:1 COG:BS_ansA KEGG:ns NR:ns ## COG: BS_ansA COG0252 # Protein_GI_number: 16079415 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Bacillus subtilis # 1 330 1 329 329 298 44.0 7e-81 MKKILFLTTGGTIASSSSEEGLVPSLTSEEILHYLGEHHGDIEITCEDLLRLDSSNMQPE EWQLIARRIAEAKSGYDGIVLSHGTDTMAYTAGALSFMLRNLDIPLIITGSQLPLLHPLS DGVENIRVAFTAVCEDIQGVYVCFNRKIMLATRVVKVRTMNFDAFESVNIEPCGRVDARG LRINRQLLIHPTNAFALEDELCKEVVLIKLIPGMNPLLFDKLAEMDIRGIVIEAFGAGGI NFVRRDLISKLETIVARGISVVVCSQCLYEYSDFSIYQTGQKVLQHGVIQGYDMTSEACV TKLMWALGKSTDTKEVKRIFETNYVNEITLP >gi|312956640|gb|AENW01000009.1| GENE 145 151961 - 152320 258 119 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNVYQKFICAVILICSQIYMLLYDVKASFGLMDLFIICLFYYLLMKRKIVLKDYVAYVG LLVTGIVLCSMFHPSNILRTGIAMTLAQIFFIVSSYFVYCKKQNKDRYIKNGYIHNEHD >gi|312956640|gb|AENW01000009.1| GENE 146 152536 - 153738 676 400 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 7 393 3 386 396 265 38 2e-69 MNRNYPKITISEEGEKWLDNGQMWMYKNNVVKLDEEIENGALVDIVTTKDRYLGTGFLSR NSHITVRILSKDTADTFDRAFFKERIQFAYAYRKTLESKNITNCRLIFGEADQLPGLTVD RYNDILVSQISSYGLEQRKDMLYEVLLEVLREDGQDVKGIYERNDIRVRAKEGLPLEKGY WKQMKLPTTTIIDENGLKLHVDVENGQKTGYFLDQKANRVLLREMAHGKRVMDCFSHTGG FALNAAYGNASQVVAVDVSQTALDQAYANAKLNHLENRISFVKADVFKYLDTCKEGQFDI IVLDPPAFTKSRRTIDHAYSGYKRINKQAMMLLGRGGYLITCSCSRFMEIENFEKMLRES AQEAGVTLKQVSVTQQNHDHPILWTMEETSYLKFYIFQIV >gi|312956640|gb|AENW01000009.1| GENE 147 153779 - 154537 262 252 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256753343|ref|ZP_05494137.1| ## NR: gi|256753343|ref|ZP_05494137.1| Abortive infection protein [Clostridium papyrosolvens DSM 2782] # 45 235 2 196 218 109 34.0 2e-22 MKTKTNDICMFLLLTFLMPFFFVLCQRYTGLPVLQLLFYGLEAASPSIAALLVLSKNRQL LSFFKKNFKGWKSGTALLFPCVFSLAPMLLARLFAGSSSSGHFLNYDLQFIVIVWAFFAE EIGWRGYLRSYLRERMEKEWHVPVSIGIIWFLWHYHYFYQNGIEVPLLSFFIGCIAESFV YEYLLQWSEGNLLSSMTYHFSWNLCIHLFAINPADNAGNEFPYILMTLFEVSMVLLLLAH DKSRHMHKLPTK >gi|312956640|gb|AENW01000009.1| GENE 148 154640 - 154855 204 71 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 65 1 65 67 83 63 1e-14 MAIILRLDRVMADRKISLNELADQVGISNVNLSNLKRGKVKAIRFSTLDKICEVLNCQPS DILEYQRTEEQ >gi|312956640|gb|AENW01000009.1| GENE 149 154866 - 155411 367 181 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKILLYCLVVCGIIVISLRLYTIYTICISPDSFFEPNLPREELILVTGKSLSNVLMSVEL TSDKAAALLEAIVGLLAEIIQIVILALALRIFQRNSIHRPFQVNMIIWLQGFAILYCILP IVQGLFIICVLGLNQANLYPRLILFQFLDIGLQVLPGLAIIGIAKVFRYGYSLQNEVDQI L >gi|312956640|gb|AENW01000009.1| GENE 150 155448 - 156023 466 191 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLKQPVNWKHTTFLWILRFMLSGVAVSIVFQCLKIIELFQMPEQSLRFIPWEVNNVVTL ARLLAESGLFSSRFYAVFDSLLAITNASIYALLLLWGIQAVKEAAKTTPFLTDILKKFKI SILLLAGFRFLLVFLEFLLALIYQPPIDWSSLFFDVVRNLFESLIMLGALWCLIHVWMYG AALQHELDETI >gi|312956640|gb|AENW01000009.1| GENE 151 156373 - 156624 375 83 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1340 NR:ns ## KEGG: Cphy_1340 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 83 1 83 83 132 77.0 5e-30 MLEYRYDTQLLIEGNDLCEDSIHDYFMENFQGDCLLAVGDAELIKIHFHTNAPWDVLKYC ATLGEIYDIVIEDMDRQSRGLKG >gi|312956640|gb|AENW01000009.1| GENE 152 156829 - 158028 543 399 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 18 359 22 365 368 95 24.0 2e-19 MAVYKNRDSGTWYFQCRVNGQRTSRRGFKTKSEALKAEATLKESIICSRKVDEITEEYIQ HLRIHETSSAYTIESTYRNHIGSVVGRKRIDKIKLQDIKGLQMIMLKKTYGKGRHYTNKT INLVTGTFNMIMNYAVKYGYIRSNPCANFESLKTVKTNDEIKFWTDMGFQKAIRYEDDFM WYCFLVLAYMTGMRKGEIRGLRWSDIDFDNHIISINRHISDKVMKEDRNTENEKRVIRGR KNGHAHKIAMDFHIENLLKELRKDNSFIDGWSKESYVFGIFKPIGQNSPKRHLDIIAKKA GIKQITVHGLRHSHVSYLISKGLNAYEIAERIGDTVEMVFKVYGHMFPNPQRNIVNVLNS NFAFIQERDKIKKGRQNERQHFPGSIKNPDIYGAKCYTS >gi|312956640|gb|AENW01000009.1| GENE 153 158052 - 158924 183 290 aa, chain - ## HITS:1 COG:no KEGG:SZO_02250 NR:ns ## KEGG: SZO_02250 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 52 255 3 222 264 80 31.0 5e-14 MPNREIMCESGTGQCDGHITNATVPCAVKRHITYLDNTHTLVHDISDKFKPYTDKVYESG AIIETYSYENMHFKKLIKSKDIAKPKKEKKKANGDYKREHRTIIRTKNRLKRLINTNIKQ YNEKDKFITFTFSEFQERDEVARKFKAFNRRLKKIYCDYKYIAVIERGSKGTERLHIHCL FFGLPYIPYETISEIWRYGHVDIRAIDEHGDVAGYILKYVEKTLTDDSYIPKGKKFYFTS QGLKQPKELYLVRKEFQGYIQTMDLQSVCHYEYLNIYDGDTVKYEKLLKH >gi|312956640|gb|AENW01000009.1| GENE 154 159560 - 160102 213 180 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNDLGYRLKKVRKARRMTRKEIGDLIGINYADTRLDAYETGKTYPREKMLNKLAEALDVS SSWLATGELDDKTVKSLEEKGIFYVVFKPFSEEIKYYYQYTDFLARNKNVIEDTLTIEDY KALTNIIVNKIEEKHGSTGMLIAPVTEDEYNDYMQQQQQDALDAGEGYVDNNGHYIPYNN >gi|312956640|gb|AENW01000009.1| GENE 155 160458 - 161204 233 248 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257082277|ref|ZP_05576638.1| ## NR: gi|257082277|ref|ZP_05576638.1| predicted protein [Enterococcus faecalis E1Sol] # 1 245 1 230 232 106 30.0 1e-21 MKKFGLASLVFMLCLSCSIAFTPINVSAASVNVKPYDTTIETNIVLNHEDEVELAGFMKM QDKITNTLSLKDGKYIYNEEKIREIVYEYDFNAYNKKYNTSWTKQSFFNSAMKNIRDFKD VKKSNGACQVETRGTARATMCGQNWESSGWNYVRVARNTSGAKKLANEMDDAADLCATVG AGAAASTISVPVLAAVLGSFGGIGKAYYNSYARWIRYNNDLTSCGIVTDQNKFTQVYDIW TQPEFANK >gi|312956640|gb|AENW01000009.1| GENE 156 161899 - 163932 2199 677 aa, chain - ## HITS:1 COG:SA1721 KEGG:ns NR:ns ## COG: SA1721 COG0210 # Protein_GI_number: 15927479 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Staphylococcus aureus N315 # 3 649 1 699 730 137 23.0 8e-32 MDMNELLKEYNVELDEKKQELCCELQHPLLINGTTGSGKTFLLLARNAYLMKVEEVEPSA ILNIVHDPAIAKRMAKDYRYLYCDDERMPSFVDMHSFAYRIIRFHDKMIQRESCKAYRDM EKVVRRLIKDMFAMELTGVQLRRLMRQISTCRTMMMSEREIASISFEGIDFPAFLKAYDK FKNERNIYDQDDILCECARILMSTPAVLQTFSSRYQYVHIDDAQELSFVAHVIIKLLFSS NCQMMMLADCDQCLDFDKAAYPQALDSFSEAYAQARIEQLEGNWRNNQTINALANEFYYK NETAMSCSSEETCEVKFKAFAQLERMYEYAMRMVVEDESDIAFLYRDGAMAMPLVELFMQ HQVPFHLHGSVKKFLQEPVVKDLCNIIELLIDPKDMRAFYEVYEKLGFDISKKVLLEVAQ RLRDDEHVDVYQAMMESSYRAAGKKKLAASMENIRTASTLETHTMIPFILDKLGYRARLL KANILMNDSNLLALRVIAARYSDPAQFLNRLREMGEFLCEPISRIQIRSVASARGMEFSR VALLDCLGSTFPKAGLQEEELQLERRLFFTGITRAKHQLEFFTSKRCDVTRLEISPFIYE LHAPKEEEAKVAGERPVAQPKKLREGGLRRGMRITHATLGEGRIMKISEGMMQVQFQTES KTLNIHHCIMNELIDLV >gi|312956640|gb|AENW01000009.1| GENE 157 164112 - 164699 788 195 aa, chain - ## HITS:1 COG:BH1295_2 KEGG:ns NR:ns ## COG: BH1295_2 COG0860 # Protein_GI_number: 15613858 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 4 172 29 187 422 78 34.0 7e-15 MAVRIYVDQGHNPGNINAGASGNGVVESEVTYWVGIYLAGFLYADQRFEVKVSRPFPDTV LGYDQASSLRARVDEANAWPADYFVSIHVNSNPNPAINGSEVYVYRENSTAYDLGVNVLE SIVDLVGTRYNQVRTNPSLYVLRRTSMPAILVELAYLSNLQDAEKLLNDQYLFAFSIYIG ILNYLGYSYDPFPRR >gi|312956640|gb|AENW01000009.1| GENE 158 164863 - 165738 1242 291 aa, chain + ## HITS:1 COG:SA0773 KEGG:ns NR:ns ## COG: SA0773 COG2035 # Protein_GI_number: 15926501 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 3 254 7 253 283 113 34.0 4e-25 MVLNFIRGFCMALADSVPGVSGGTIAFLLGFYDKFIGSLDALMSGNMQQKKEAVIFLLKL GIGWIVGFLMAVSVLASIFHTQIYAISSLFMGFILFAIPIVIREEKKNMRLNAASMIALL VGIAVVALITYFNPVAGSGSSVNLAQLDIGLIVYVFISAMFAISAMVLPGISGSTLLLIF GLYVPIISAIKALMGFDFSYVPILFVFGLGIITGVITVVRLIKFALDKHRSIMVFLIIGM MLGSFYAIIMGPQTLETPQAPLSLETFEILWFIIGGAIIFGLQKMKDISEK >gi|312956640|gb|AENW01000009.1| GENE 159 165847 - 166605 796 252 aa, chain + ## HITS:1 COG:PA5500 KEGG:ns NR:ns ## COG: PA5500 COG1121 # Protein_GI_number: 15600693 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Pseudomonas aeruginosa # 1 189 6 192 269 99 30.0 7e-21 MEIIHISKSFGSNVVLQDVSLQLIPGKCIAICGHNGCGKSTLLNAVAGFLRIDSGELQLK NAVLQYIPDHFFTTRMNARDFLMHMGAIQGMDADAALAVIREYTHKFFMDDLLKTPMQYL SKGSLQKVAVIQALLQTPDILLMDEPLNGQDIASQRVFIELMEALKKKDVCILMAVHEQR LIKEVADIVYELQDGVLRPMASLPVMEQVYMHFSRQQEEKKLVCAKEESDACIQQYLMQG WHLDELRHENNL >gi|312956640|gb|AENW01000009.1| GENE 160 166589 - 167320 541 243 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225568894|ref|ZP_03777919.1| ## NR: gi|225568894|ref|ZP_03777919.1| hypothetical protein CLOHYLEM_04973 [Clostridium hylemonae DSM 15053] # 1 242 2 243 243 86 27.0 2e-15 MKTIFELNQYYIRRTLTSTRLVMPLVVTVVFCGIFYNENGINPYSSFAATIMLSFAIMGW SVHSMQKQEALEEQILILQSRGNELLYYVSRLFFFLLCDLFFSFLILLIPCLFYLINGAA FTLYPIRADMLFGYFNLHVSAGLCGGMMISLLHPRIVSNQKLALPLACMLIIAAMTFSAL LQDMQLPEIFACVFPPVSDISIQSAKWTQVPMRETGIYTLQMLLYAAVYAIVQVRILMKR KFG >gi|312956640|gb|AENW01000009.1| GENE 161 167531 - 167929 501 132 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2571 NR:ns ## KEGG: Cbei_2571 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 3 94 86 176 260 86 46.0 3e-16 MINLDEVLTFTEAADKWGLADGKTIRKAVERGRFEPHEIKKSGNVWLTTYAAMQRVFGSP RTSPSVLYYTELYENTRERLERFFEEAGLALQRGDMISIVESREHPERIFCILKTEEELE GLQRRLKYFMKS >gi|312956640|gb|AENW01000009.1| GENE 162 168121 - 168546 286 141 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2187 NR:ns ## KEGG: Cbei_2187 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 129 1 130 134 110 36.0 2e-23 MLRMVICCGGGMSSSVISVQIKKAIEDKGWEDEISVAFMPLLFLVKHQEEFDIAMLCPHT MHHAQEMARKNEIQLPMYVIPARLYGSMNLEYLREDAEDILKIYAETKENPLHFPGEKFL EVKRNTSHRRWIKKHPQAVQD >gi|312956640|gb|AENW01000009.1| GENE 163 168733 - 169590 997 285 aa, chain - ## HITS:1 COG:BH0470 KEGG:ns NR:ns ## COG: BH0470 COG3639 # Protein_GI_number: 15613033 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Bacillus halodurans # 82 229 88 237 288 86 29.0 6e-17 METYTLTSPAAPTLKKKKKGRYILRRKDTSRLLSRSVVLIFAFVFLYFILFICPYRWDQV RPQLIATYLSSFLDFTAVTQKTAIEVFTSLINTIALAFVTTIIGACIGFLLGLMAARNLS HPWVCSMVRGFAGLIRAVPTIIWVLIFISGFGLTATTAIVGMSFHSVAYFIKSYSEAFEE VDPGAMEAMKASGGSWWQIVWSAVIPVSFTKLLSWIAMRSEMNFAAAVIIGPAVGVPGTI GSILNSYQRSGGYGTVGLCVLAIFMTALLFEIIITLYKQKSIVND >gi|312956640|gb|AENW01000009.1| GENE 164 169590 - 170378 892 262 aa, chain - ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 47 262 67 276 276 110 33.0 3e-24 MSYFTKKRRSLGMYAAVTIALLALCTWRLEIDWGLILANFQVSVVRFTKTYLPMDFSQLR EQLYQLWITVVISIAGAFVGMLLAFFSSLAISSKTSRYRVLKYLVRALASLTRNIPEAVW AVLLLPLLWYGDFLGFLVLCIISYGFLTRSFADSIDETNASCIKALEATGANYWQIVVHA VIPETMPSLISWTLYAAENNIRSATVVGMLAGGGIGYLMSIYQGGLYIGYTGYQLMASCI LFIIITVIITDQISAQIRKRII >gi|312956640|gb|AENW01000009.1| GENE 165 170375 - 171163 279 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 228 1 219 223 112 31 2e-23 MSDILRVQNVSKTYEDNAVQALRHASFNVHEGELISVIGPSGSGKSTLLRCINRMIDVSE GSIQFLNYEVTCANKRQIKDIRRNIGMIFQHYNLVYRLNVLENVLHGRLGYYPTWKSTLG MYSQKDIEQAAKLLEMLGLGDKLYDKCCDLSGGQKQRVGIARALLQNPKIMLCDEPIASL DPQSSKVIMEHLKAITTNMRIPCIVNLHQVDVALHYSDRIIGMHQGSIVFNGKPQELGSD VIEKIYGVPMNELISKVEEVKA >gi|312956640|gb|AENW01000009.1| GENE 166 171456 - 172442 1180 328 aa, chain - ## HITS:1 COG:YPO1183 KEGG:ns NR:ns ## COG: YPO1183 COG3221 # Protein_GI_number: 16121478 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Yersinia pestis # 1 327 1 303 309 61 24.0 3e-09 MKKMVNLCMAALLSCSMLAGCSSGKDNSGTGEKKDITIAFLPNEDENAERSSEAFHMLKE EVQAALGDNYNVKIAKLDNYNAVMEAMVSGTAQIAWESGATFAASYMKDDKIQPILSYGP NGDPEKSGYNAYIATNKKHAADFQGMSRDEKLKSLKGKSFGFVSPTSTSGCLVPTTAFWK LFGPDGDKTVSKKEQINIKNAADGGVFSEVQNGGDHQGAVQLLVNDKVYAGAFCCTYGDS FKDQLDILDTTFVPNGPLWVNTSALNKEEISKLTDHFVNLTADTAKNKNFFDQEKGFFFE AEEDPATFKFFKTDVSRYQFILDMYKDQ >gi|312956640|gb|AENW01000009.1| GENE 167 172559 - 173263 750 234 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 14 234 20 236 240 73 27.0 4e-13 MMTSWEPVVDYLLENMQKQTYKKDERLPSEHELAQRFELTRIEVRKAYDRLKEMGYVYSR QGKGNYYAGYLEKVELVLSSTDSFSMKMSPLAGRFSTRLLSCERIAWHKDIHERLAVVQG EPVLCVKRLRYLDHMPAAMHISYVREKSFPNIRECLQKNPSLYAYFQGRGIQDIAAEDTQ LTISTLNTEERLYMKVSGIVPCLMLKGVSRDCKTKEILELSTIIYRGDKFIFRL >gi|312956640|gb|AENW01000009.1| GENE 168 173499 - 173927 356 142 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEYIMYAFLAMVLLMLLWALRLWYRMHQEETVYAVYKKSDYIFCAAFLLLGILNLYDERR LQYGSILMALGILYGMRRSGISQHNLYVDGRRIPLQPGKLITQKEQDGCLQLYYELGVHY GTLNFSIDKKEQITQILKNQGY >gi|312956640|gb|AENW01000009.1| GENE 169 173939 - 175159 1483 406 aa, chain - ## HITS:1 COG:BH1167 KEGG:ns NR:ns ## COG: BH1167 COG1668 # Protein_GI_number: 15613730 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Bacillus halodurans # 84 398 84 414 425 132 29.0 1e-30 MRDFLLVLKFELQTMVRKKSFLISTVLVAAAAFVLLSIPRVFSDDKGTDDTASEKDKTML IYDGSGILKNRELAEKNFPEFQISYANSLSEVEEKVKKSEADAGFEVKTPTSFQYYVNNS SLNDANSSRFKTLLQQQYQASELAKLKYDAGKVQAIYQTEVISDTTVLGTDGMNNYFYTY VLILVLYMMILIYGNQIGVGVASEKSNRAIEILTTSCSPNALIFGKVIAGAIAGVVQTAI MLGSFLIAYQLNADVWDHMLDKFLDIPGLVLVTFALFGILGYLLFSFLFGAIGALCSKVE EVNGATMPIQLLIIAVFIISFITLQNPDTLLAKIMCYVPFSSWMCMFINVAMGSVSTMEI VISLALLAATTVAMGLLGARLYRRGTLSYGNSVKLKNIMKMVKQKD >gi|312956640|gb|AENW01000009.1| GENE 170 175156 - 176073 1377 305 aa, chain - ## HITS:1 COG:BS_yhaQ KEGG:ns NR:ns ## COG: BS_yhaQ COG4152 # Protein_GI_number: 16078053 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Bacillus subtilis # 3 302 2 294 298 212 40.0 9e-55 MELQVHDLHKSFDGREVLHGISFSISSGKALGLLGRNGAGKSTTIRILMDVFKADQGNMS MNGKTFHAKDYNIGYLPEERGLYPKKKVSEQLIYLATLRGLSHGEAKANLKKWLKRLGIE EYENRVLDTLSKGNQQKVQLAQTLMCDPDIVILDEPFSGLDPVNSQTLKEVVQEQIQDGK LVIFSSHQMNYVEEFCEDIVILHHGDVVLQGNLKQIKKEYGKNRIVIRALYPKKQEFREL LETQCQELLHIYEEKDGGFIIELQPNVNKRDVLTRMLELEVDLEAFQLYEASLTDIFVSK AGDEE >gi|312956640|gb|AENW01000009.1| GENE 171 176233 - 176448 396 71 aa, chain + ## HITS:1 COG:SP1423 KEGG:ns NR:ns ## COG: SP1423 COG1476 # Protein_GI_number: 15901276 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 2 68 13 79 79 82 59.0 2e-16 MKNLKIKMARMELNMSQEELAGKVGATRQTIGLIEAGRYNPTIKLCIKICIALHKHLDDL FWEDDYDKEEL >gi|312956640|gb|AENW01000009.1| GENE 172 176450 - 177340 842 296 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402419|ref|ZP_06646555.1| ## NR: gi|293402419|ref|ZP_06646555.1| hypothetical protein HMPREF0863_02696 [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 296 5 299 300 361 61.0 3e-98 MKTSLLRDIIRYAKTKGKAPLDERQMDTLKDLYMELAKSVILAFMVFMIVYGYKEMYQKE STFNYMSLAMSLLGAVTYYYLLRSCYQQVIGIDVNFEILVIPALGFTPSLLMNALHVCGL LLDADVLFFRITTFLWPLYFIIFYLGANRVYQRGRQAMEQEIYQGEIHFRSRKQIVNFII ITIIFISILPISFDALFQIGIVAGTLLILFMICYYGFYTPHNEYILNESGLIYHKSLWNG RGGFLRYDEIESVKQQDTFNVGYAKDKVCIHCYDGRDILLFPENAYRFCVELENNL >gi|312956640|gb|AENW01000009.1| GENE 173 177462 - 178784 1037 440 aa, chain - ## HITS:1 COG:no KEGG:CPE0820 NR:ns ## KEGG: CPE0820 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 165 431 3 273 275 110 27.0 8e-23 MPRIGKRILKSSLAVFLCFLIYLLRNEEGIVFYSCIAAVLCMQQDTSNTQRVAANRVVGT LVGGFCGMLVLLFEKHILPGNTQLMQYALISFMIIPVIYITVLLKKTSASYISCVVFMSV TVSHGADVNPYLFAINRMIDTLIGIAVAYGINCIHLPVHLQKETLYVSTLDHTLLQENEQ LSPYTKVKLRQLLEQGAAITLATSRTPATLLPILEGIPLTLPVVVMNGAALYDCRTQTYS HSRCMKKEQVAQLLQLLDEEGMNCFQHVILHHILHVYYSDFRNSLEEEYYHEMRRLPYKS YVYEQKAQAHACVCITIMDTIPHIQQLYTRMQQQSYAADLQIHIRFSEEHQGYKVLDIYS VDATKQAAVHIIQRESGFERLCVFASHQRDAALISSADEAYTVSEGDADMQELCCVLGSR ERDSVIREIERSYHGHRKRK >gi|312956640|gb|AENW01000009.1| GENE 174 178984 - 179100 72 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSRHFIFAKFRHGCLESVNVRKAVVFFVLLSIEPAYA >gi|312956640|gb|AENW01000009.1| GENE 175 179397 - 181988 3155 863 aa, chain - ## HITS:1 COG:FN1022 KEGG:ns NR:ns ## COG: FN1022 COG0474 # Protein_GI_number: 19704357 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 5 863 4 862 862 847 53.0 0 MKQMYEKDVAQVMEELGAVETGLRCEEVAERQNTYGRNELEEVKPVHPFIVFLSQFKDLL VIILIAAAIISMVSGELESTIVILAVITMNAILGTVQSIKAQKSLDALKQLSTPHSRVLR DGTLMEVSSQELTVGDILFLEAGDVVGADGRIIENHSLQVNESALTGEVESVHKAVDTIT GECGLGDQKNMVFSSGLVTYGRARVVVTAVGMKSEIGKIATLMNTAQDRKTPLQKTLDDF SKKLSIAIIAICILVFALNVWQGNAVMDALMFAVALAVAAIPEALASIVTIVLAMGTSQM AKENAIIKNINSVESLGCVSVICSDKTGTLTQNKMTAQQVYRNHELLHANNLKESSPLDR LLLLGFALCCDATTNEHQRIGDPTELALVDLLELYRIDELKTREKYPRIDENPFDSERKL MSTLHVIDGENRLLLKGACDEILKKATYIQTEQGIRDITEDDRERILKMNHTFADNGLRV LGFATRLVEKDHIEVEDENQLIFLGLISLMDPPREESRAAVENCQRAGIIPVMITGDHKV TARSIAKALGIYKNGDQCVDGTELNAMSEEELMNRLEHIRVYARVAPEHKIRIVNAWQKK GKIAAMTGDGVNDAPALKQADIGIAMGITGTEVSKDAASMILTDDNFATIVKAVATGRNI YANIKNAIIYLLSGNLSGIICVLAASLLSLQVPFLPVHLLFINLVTDSLPAIAIGMERST KDILKEKPRNPSVGILTPATMKQLGIQGILIAIVTMSAYFLGLKESWAIATTMAFSTLCL SRLFHGFNCRSQRSLYRIGLFTNKYSILAFVIGFCFLNAILLWQPLHSLFSVTTITMTQL FTIYGLALIPTALIQLGRMLRHR >gi|312956640|gb|AENW01000009.1| GENE 176 182326 - 184368 1961 680 aa, chain + ## HITS:1 COG:aq_035_2 KEGG:ns NR:ns ## COG: aq_035_2 COG2199 # Protein_GI_number: 15605636 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 515 680 72 244 251 116 40.0 1e-25 MKEEIQRTFDNYLQRLKQDESICENFKKLVLEQLGLGTELDPILFRFLDIAKEQNYAYAV PLGYAMLFYATYSKDINLAISYNEKARELFMKMPDYKERDGILTVANNAVLANILKEDYG AAYREIAAAMPMAEKGGRMSYYAAFLNNGAIILREFGLYKKAIQQVEETLEKRDFIGSSN FIVTIYLLSNLYLSARETDKMRKLLQTYMPELKKSEYYDSDIYNKQFMEAAILDDRREEA RQWYERLIQTYDFSKNDHLDNNEVHLSLARYHLYQKDYQKAKESYLHLLSHKDEVLGYKR QILEETALVFEGLKEYDKAYAYQKKAHELMITYTAFIDDMYRQEIEDVWEKNRMLSYEVL YDRLLDMTEFGKTVTSCLNRKQLIEVIEQHAARIFSFDDWDILLYEEPQKRFRSFSNTCY PLSEHPILEACTREYTSRKLLNLSADEETAVSLGSLYEAHTRSMLLQPITYQGDMLALFC MKSDQIENFSRTDQRLLQVFADYIAIALHNVRQFEDALEKSSYDYLTGIYNRSALMQLGE DMLENAKKSGHSIGVLMMDIDDFKQINDTFGHMQGDAVIKQVTVLMKQMQRHGIIARFGG EEFILLIDSLSKHTLYELAEEIRYACEACTIPADTGTIHFTISIGCCYQNQVHATLKELF NEADQRLYIAKRNGKNCVQM >gi|312956640|gb|AENW01000009.1| GENE 177 184660 - 186294 1915 544 aa, chain - ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 7 544 6 538 538 259 33.0 6e-69 MKDVVHIVGHKNPDTDSIVSAIAYAQLKQKLGINAIACRLGELNPETDFVLKKFQVPEPV YIQNARVKLYDVPFDEPLLLKKDDTIKEAWDRMGMRSTSALFVVDEAQKLIGVVSLSDMT NILMSDKGEKPISLMKNTSCENIRKVLQGEFLYECDAYRTNGRIHILCSRNAEYSDISYR DSIVVVNDDLKLQKRALSDGAGCMILVDVDIISQGIIRMAKEANCTIIKTPLNMFQVARS MYRSPSVKLIMKRKIISFNNHAYIDDVYKQMSKSRFRSYPVVNNQGVVLGSISRYHLLNY QKKKFILVDHNELSQSIDDLKEAEILEVVDHHRIGDVETTTPIRFRNEIIGSTVSIIARM YKEAGLVPEVKTAAIMCCAIISDTMNFNSPTTTPIDKELARELAAIAGIELDAMAKEMFG AVATIKGRTMSEILYNDFKEYNIDGKRIAIGQINIADEQEIVNVQDEIRAYMEKINEINK FDLLMMCFTAADGSGSNLVFIGTLSYLVDEAFKEDIMDELYFVDGVISRKKQIIPTLSKC LESM >gi|312956640|gb|AENW01000009.1| GENE 178 186468 - 186887 307 139 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTLKRAILFLFPYLILAVCILEERWRIQAASLMQYDTYTDMLTLTAVICTLFLFFYIRN IMEKYDGIVLLLNTIAVIVYTLLIWLPDVFAFLSPIAYSVFQNEQLFLTIIYGLLLIGEG YQISFLIKERRTDQGDSDS >gi|312956640|gb|AENW01000009.1| GENE 179 187013 - 188218 1105 401 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_0966 NR:ns ## KEGG: Dhaf_0966 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 3 66 2 65 277 72 54.0 4e-11 MNKEQFAEKIIRLRKKKGYTQAQLAELLNVSNKAVSRWETAEGYPDITLLKPLSEALGIS CDELLGDTKGYSDLSRYDLQRYLPYGLTLLALLLYYVFLKLQISQLLSFAAFLGMMVFSN VLMIQHTDKRALPSLTRWNLLLAYFPLVSFLQYLYILYLFLQLGFSNILEILAMQTEEFH PYSFFVSGYETGVTIYLLMYVAALLVLAVVYGCLRHTFIMRYDISWNGLHKGVHGKEQEE KNILFRKWSDKGEAVLRIVMPLAAGLTLLAFGILLFQEYRSLITQFHNSVPPDFSGNDYA LTVSNEVLGACRGKLLLLLCGSCLLQLLAIMKSKRVLYYISNVSVLFLYGVITLLFTTIV DRFYIKLPFAFAIPAGIGMIMWYCRDILQKKGKHGTGNKKT >gi|312956640|gb|AENW01000009.1| GENE 180 188298 - 189047 956 249 aa, chain - ## HITS:1 COG:CPn0417 KEGG:ns NR:ns ## COG: CPn0417 COG0860 # Protein_GI_number: 15618332 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Chlamydophila pneumoniae CWL029 # 15 235 18 237 264 93 30.0 4e-19 MAKQRKKKRGINPIRLLIVVAMEFLVILGLLIICVKVFPDNPILAPLFSKKAETPVVVLD AGHGGYDAGSTFEELYEKDVTLAFVKDIGARLEANGYPVLYTRKSDDVSWPANEVEDLSE RVRISNESDARLFVSIHTNAAEVINGSYGYEIWGKMKEPRVEALSENILKELDSLGYSQN RGMKDQDLSPIQVLQNNKLPSILIEAGFLASENDRLYLIDDAKRKVFADKIADGIIKTLE DEKKSNSNP >gi|312956640|gb|AENW01000009.1| GENE 181 189159 - 190370 1202 403 aa, chain - ## HITS:1 COG:SPy1117 KEGG:ns NR:ns ## COG: SPy1117 COG0628 # Protein_GI_number: 15675097 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 23 385 16 378 382 135 30.0 2e-31 MKLPFRDKDVIRSIRPWIYLSTYILLLGFLLVHLQDLKNGFDFVLSVFKSLLYAIVFAYV LNLPMKHIEGFLLRHTKQDSFLQKKKRVISMILTFLLALILIILIGSIILPSIIDSLISL MENLTSFFTNIVKNIDEVLAYFHIDYRIENITQVEQFIQMPWEKIVTNVINLLSGSASGI LSSATGFVSSFAVGFTGFMFSLYLLSGKENFIRQMRKVTAAFLGYGNSKIVFRYAARVNR IFSSFIGGQLTEACILWVLYYIFMRLFQFPYPELICTLIAVCSMVPVFGSMFAMSVGAIM MLSKDPLQSVWFIIFYQILSYFEDNVIYPRVVGNSVGLPGLWVLLSIFVFGDLWGVFGMI MAVPTTACLYVFFTEYVNHRLRKQRLIVTEETVYQEDEEEHSA >gi|312956640|gb|AENW01000009.1| GENE 182 190432 - 193938 3218 1168 aa, chain - ## HITS:1 COG:FN1170_1 KEGG:ns NR:ns ## COG: FN1170_1 COG0674 # Protein_GI_number: 19704505 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Fusobacterium nucleatum # 1 403 1 404 410 561 67.0 1e-159 MTKKFMSMDGNTAAAHCAYAFTELSAIYPITPSSPMAEVVDQWATQGRKNIFDSVVKVAE LQSEGGAAGAVHGALQAGSLATTFTASQGLLLMIPNIYKMVGECLPGVIHVAARALATRA LNIFGDHEDIYACRQSGVCMLASHSVQEAMDLAGVAHLAAIKGSVPFMHFFDGFRTSHEI QKIEVMDTDVFKELVDKEALAKFRKNALNPHTNPVTRGGAENDDIFFQGVEARNKHFDAI PDIVADYMKKISEITGREYAPFTYYGASDAERVIVAMGSVTEAAKETIDALTAAGEKVGM IKVHLYRPFSVKYLLAVLPETVKKIAVLDRTKETGSMGEPLYLDILSALKDKDIEIIGGR YGMGSKDTQPYHIKAVFDELKKDEMKNSFTIGIVDDVTNLSLEADSNFHVPADYTSCLFW GLGSDGTVSANKSTVKIIGDNTDQYAQAYFAYDSKKAGGVTRSHLRFGNSPIRSTYYIGN ADFISCSLDAYMFKYDMAKDIKEGGSFLLNTTFSKEEIVEHMPNRMKAQLAKKHAKFYII NATKIAQEIGMGRRTNTILQSAFFALNEQIMPYDTAVELMKAAAKKSYSKKGDAVVQLNY KAIDAGKAGIEEITVDAAWADLPFDSSRKLTGDEYFDNHVAVINGLEGYDMPVSAFTGDF LLDGSIRNNVAFEEKRTIAVQVPTWHPENCIQCGICSFVCPHATIRPFLLTEEEVAAAPM EFETITPMGKGVENLKYRIQVTPANCVGCGLCAVECPGKAGNKALEMVDINEKLGEEPLA DYLFKHTEYKTEFFPADTVKGSQFMMPYFEVSGACPGCGETPYYKLVSQLFGHDMLVANA TGCSMIYCSSTPSTPFVNDSNGEGVAWANSLFEDNAEFGYGMALAQNYKESRILKTMEDN MENVEPALKEAFAKYLEVHGDRDAEREIAPTIKELAAKSDIAMVKELADVDLVSKSIWIV GGDGWAYDIGYGGLDHVLANNLNVNVLVLDTEVYSNTGGQSSKSSQAASIAKFAAGGKTT AKKDLGQIAMAYGHVYVAAISMGANKNQTLKALKEAESYDGPSLILAYSPCAEHGIKGGL ANHQRTQAKAVECGYFDLYRYDPRKETPLTIDSKEPDYEKMLDFMMTETRYSQLPKVKGE TAYEMFEKTKKDAMKRHKRLLAIAKEEM >gi|312956640|gb|AENW01000009.1| GENE 183 194147 - 201436 8137 2429 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401895|ref|ZP_06646035.1| ## NR: gi|293401895|ref|ZP_06646035.1| hypothetical protein HMPREF0863_02175 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 2416 3 2415 2429 2284 50.0 0 MSKRLWNAFYRMLPVSLLETAQPCIENASMDIVIEERMRDGSARDIRRMRHVKVCHSQNE CCYYDVPIDPATGIGKITISDIQAVQHVIVQTDESGQQMINGDEVDITYLVDEEIQQEDY ATVIYTSTTSHRTVRIINQQLGETQLHVVKKLVDMNGDPLEFQRDMAFTLHVMQNGQEQC VTLDASNDFQETICDLLPGYTMVEESGCTGYLTRWRFNDEGETSDGRFDLLPQENELVMI NELRADTVLKIEKYIRMENGHLCKPGCGEVYQVRVISDSDDRLIELSEDNDYCAMLCGLL PGYYDINELSDPMEANPVYIVNGREEQCYANVELNDCEQASVMIINSQQNMGLCEGMTSP LRICKFIRSCDGSVSKPSKDLQFMVMVSGCGMNETFNLNASNNFCVDIANLCNGEYVIEE VSCNTDYTTSYVINGGRESTSACIRINGDNAFCVSVINEERNAGTVSICKYVRNEFGDLI KPQKHQCFHVTLSSYFCKRCFELNADNDWCMCFDDLRFGSYEVREDAPCEYEVSYQVNCG RECRHARFVVDDCCENEIRIINSVAKSSCGVLKICKFEETRSGELVKPGRDEEFEVCVES ACFKETYLLKAGNNWCVMLEGLAAGEYRITELDSYDYDVSYIVNQQDECDAIVYMDGSNQ EVSIINRRRNSGMLKLRGVVRCCNGDMQRPSRGMLLDILVEGRECSEHVCLRAENNWCVI LDQLPQGRYRIVQKDNLGYRVSYVIDGNEESFGNVELGQCDVEVLIVNQESDCTGSVRVT KYIEDAHGELFMPCPQDEFRFLLQGQGFSRTYRLCARNDFCVYFDDLMEGSYEISEVDEN WNVRYRVNGESCERACFTLGRDDEYIDIINSEQRQGVVTIEKRIRDGNRIVMPDEDAVYR VLLKGKNCHEVYELHAGNDFCICLSNLANQHYELRELGGGKHVYDINGELHESCYFLFEG ESMHVTIINEEERCGCMLLEKRIADADGNLVMPSYGESFCAIVESDMCTQKIELNSENDF CVRLYDLPQGHYEVREVPCEGYEVSWLINDLPCASAVVDVCDEDVCITMVNTPCPKGCIR VGALMEEDGVRRDLCPGEEVRVEIVSEHCKETLCLNSRNSFCDELKNLQPGSYTLRVLDA GAVRFEIEECVFEDVVCIELNGECVSVCAVIKQPRRADITVTKCMENGFKERFKPERNDT FRIQLLHDKEKQECVLDRSNDWTATFCRQPNGAYEIRELGDHEVRYQINEECPKDSGYFE VRDEAVNITVLNASEAMAKLHLEAVVKNCEDDLTAPSKDMVFHMQVKGKHMDKTFVLNER NHWHQAVELPQAEYQVIQKEDPQFKELYYLVDDARECDGTIVLCSDVHVQSVNVMKCALG SITLSKYMRDASCGCLKKPQQEEEFEVDVRGEAFHQIITLNSCNRWKETLEHLPMGVYEL RELNTTHDVSYIINGGKEAESAVINVEAENVDVKVINEEKQPHEGSIELCKLIRDTEGCY RYPSEQDSFWVRIKGEEETSRVLLNYANHFYASLRNLKDGWYEIIEESGQEGVRYVVNNA APLARGIVHVMQNANTVNIINPQGTGNTGSITLSKYVEDAQGLLSKPQSGSYRIHVSSPG YNEIFTLSSRNSFTETIGPLPSATYVIDELDHEDVSYIIDGGSQVDRAIVAVNGTAHQVQ VINREQVAESGSITMAKYIRQDGMLMRPQKDASYVFLVSGPSYNELITLDASNRWMRVLS DLAAGDYVISETTTMDAVSFIINGGNEVDRGIINVAGTSNTVQIIDTPQASGRGSIQLDK YMRRNQNLVRPDEDFVSTIHISRPGYNEVFTLNRENNWSLLVDALEDGVYVVDEVDDRYD VSYIVNGASEVNSAIVNVEGNVSTVQIINTVKEVFGSIRIEKFMRVNGKLEQPAQDFVTR VHVSKPGYNEVFTLNAANHWSILVKDLMDGWYVIDEVDSDDQVTYIINGGSEVANGIVHV EKNSNEVAMIDAAGGSGGSITLSKLIRNASGQLVLPNDTQRFVVAVSGAGMQTSVVLQKS NSWKTTLRDLAAGTYQISEQKPGGYEVTYIVDDAQESSTATVEVGRDAHNVSIINAQRSS YGKLEITKFIKQANGTLIRPADGDQYVVEIYNMTTMRRVELNFGNSFTYVVNDLPKGTYS IREINNDQFITTYRVNGGAETDSATITMGDAVSNVVEVINELIVNRSTIEVFKYMLDDDG NYLPPSAPDTFRFRIRGEGIDQVYDLNVDNSWHQSLTTYPSGAYEVQELDSSYPVQYLIN SPELVDEAKFTVLPGTTVVVGIINRTSGVQNGSMELTKRVRNAQGELQRPADSQSYVMQV SSDSFNRFVTLDKDNDFTALLENLPYETYQIQETSGNGSVSFLINNETETTQGILEIISD TRNEVTIINTETQAFYRSNAANTVKIVIE >gi|312956640|gb|AENW01000009.1| GENE 184 201529 - 201663 189 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNEYDIPFVVTLHMKNTYAVLRVHVIKIEGQPYVLLQLEPLMN >gi|312956640|gb|AENW01000009.1| GENE 185 201696 - 202502 922 268 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401896|ref|ZP_06646036.1| ## NR: gi|293401896|ref|ZP_06646036.1| hypothetical protein HMPREF0863_02176 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 268 1 269 269 175 42.0 2e-42 MKTWKDFLSFTNIRERIASLLIMLMLLSILYCSIYSMGISVVSRAGSMLVSYLFLYLIVV VAAYVYLIVMFQFIRTKREDIRTLTMKDYMFPLIGVQTLLFVVMVGSSWLSFQLMLADMS SINTILTPIMLVLMMFYIPVQVFACFAIYDGARNPFLIIKDAFVKIIRHYRSSFYSMLVI FLIAFAYTSFMNAFFQYGTLFAVNSGVVDIMTRSNPFMDAMELGLSLFDNMQLLPAFLVS VVYGVVMCLVLVFYYTFMVCIYDEDVHV >gi|312956640|gb|AENW01000009.1| GENE 186 202745 - 203209 310 154 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0102 NR:ns ## KEGG: EUBREC_0102 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 15 146 447 584 591 93 39.0 3e-18 MSEFSAITAHYLHVDENSIDVLTDKLPQKDWKGFLRGYPKILMDTISYFDLINENSYQTL LLGLLMRLGNAYEISSNREHGEGRHDILLSNKTSGEPSLLFELKYTKDENIDLTKLAKLA CDQIIDKKYDHDMQNVIKVGLAHRGKQVEMYVHA >gi|312956640|gb|AENW01000009.1| GENE 187 203289 - 203948 306 219 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1380 NR:ns ## KEGG: Lebu_1380 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 24 212 184 364 552 133 39.0 6e-30 MSSILQKTRYVVYRRIGAARPRRDTPFIEAHTQGFYKEVSGALSALLHTALKTSDDLQFA MLTGIQRVAKENTPKAGRGLFSDLNNLLVCTVKDKEYAEYFGFTKNEVKDLLAYYDLKYT DEVRALYDGYNMGGVDIFNPWSIINYAERKVLMPYWVNTSSNKMIKVAMKDCDASFKEGY EELIRIGTVRTLVNFETSFYELKETSSLWGLFAPQAGSA >gi|312956640|gb|AENW01000009.1| GENE 188 203900 - 204208 114 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224543614|ref|ZP_03684153.1| ## NR: gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 [Catenibacterium mitsuokai DSM 15897] # 1 102 77 179 543 89 47.0 7e-17 MKTEYASYINTYPTIFLSFADAKESKRRIVKSIKEQLLNVYDEYACVLEKLSMFEKPKFD LILRGLSDLEDENLEPVDHAISFLMKKCHQYYKKRVMLFIDE >gi|312956640|gb|AENW01000009.1| GENE 189 204915 - 207257 375 780 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1883 NR:ns ## KEGG: EUBREC_1883 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 141 746 96 701 701 84 22.0 2e-14 MQLIRYEIRKLTSKRNLIVAILLLLFATFTFLYMEQLQSNDVMAKYKDVYFSINKQLNGK NLQDKKAWIEKKHTFFTQVKQYEEQLHLTEAFQDDTEAQKADADFLSEYQNLLQTDIYTD LNAHLQIYQYLHTYYNRITEYQTYLDGILKKTDFLKNNPMHITISDEKLQQLEFTKSTYE RLRNTSFSDEGFLVFERYVTSSVSIMICFAWLFIAIIVLQSDESADMTSLITTTKYGRVA SRFSKCIVIFITGILLTILIEGGYLLLLQGLYGGINWEASIQSIPSLYTSAFQGNVGMWY GITFAIKIITGFTLAMIFACLYQCFQKFSILLMSALLALSYLLFQTISVNSILRIFHYLN LYEISNTHTFYQDYIVFTFRSITISLAELLCICIIICMLLFTALFLFLHKKVRIPKWNAH SIAFVQHTSLLIHEIQKIIVNNKFFIICVLLCVYQGNYSYTIASQRQDSVIEDKVIELYK EYGGVLNPVKKRKIEKQYKLYEEQETELEKLAAEKDRGMAASEANYQALLKKSMDQIKDK AAFKIFYKDYQDGEVLVYKKGYQAIFAMNTQERDIQMSILLIASLIFALHGIYTFDQQKK EYILYETTKKGRRSRNRAKFIVVLMVSVFMYLFYNLSDALAFHQLYPMFQWDAPLQAVVP DDWSIASSLPLEISCLQYACLLYFIRCSGVVLSGCIVALISKKCENPLVSCFLSLFILLF PMILYYNGADFILYVTVFDLVQGNLFLYHNFNFIKYLVIILFLAGSSVRRFSLIHSKRKL >gi|312956640|gb|AENW01000009.1| GENE 190 207263 - 208114 491 283 aa, chain - ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 4 279 2 282 294 164 35.0 1e-40 MISLNVQKVTKNYGKTVAVRDMSFVLQPGVYGIIGPNGAGKSTLLQMITTNLTQYEGTIS YCGDEIKKMGSTYRNILGYMPQITTGYGDFTAKQFLYYMAALKGIKKEEAEQKIKALSSI LNLDTYLNRKIKAYSGGMKQRLFFLQALLNDPKVLVLDEPTAGLDPLERIRLRNYISTIA KDKIVLIATHVMQDIETIAKEILFIKEGNLLFEGSITELIERLKGRVQETLIAEDVWEEF QRTHKITRSLRLDTVFHVRYIVDEVGESSVLPSLEDAYLYYMG >gi|312956640|gb|AENW01000009.1| GENE 191 208126 - 208896 438 256 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSNYTVYGDKLYYVVEAFNKKDQLTETIIRSNFDGTEEEQLLSVTKSDDGEDVSFAFTI HKNILYYADSNKVHAYDLSDNEDEICFELEPDTNIVNMFFEDDSVYITTEIYKDKQEVIK NAILKGSLTDYSMKLWQKEKNVYYANSQFLIEVGNGEKEGVFYYDVASNKKKKLLDTYSF SAFVNDDYIVLCDIDMKNLYLFNRKGELLDKTALEHMEGLPQGIVHHSFYFANGNKFYRY PIKEDKFQKYVQIELT >gi|312956640|gb|AENW01000009.1| GENE 192 208985 - 209305 194 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTYQQYKEQLSAQLKGHHLRLFAILLVSSLLISLCKDSLIYIMDAKSLMYSILSFLLSL FFSLINYVILFLFIQRVRNESFGVKDVQYGASRFIYLILAGLNSFL >gi|312956640|gb|AENW01000009.1| GENE 193 209432 - 209893 394 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401898|ref|ZP_06646038.1| ## NR: gi|293401898|ref|ZP_06646038.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 153 1 153 153 213 71.0 3e-54 MNVKSKVLKIRNLPTDGRKIDQINAKPYLVIAVFLFIGIALLFTRVYLIGIVITFLFLYC LLFVKDVVLIEFYETYAVFYLNNGKEECFLLFWQDVAKWSITSSRNDLDVLNIELKNHQC ISLKCVSRKKVEKYFLQYATPIRESEITKQHAL >gi|312956640|gb|AENW01000009.1| GENE 194 210040 - 210924 812 294 aa, chain + ## HITS:1 COG:MA1724 KEGG:ns NR:ns ## COG: MA1724 COG0668 # Protein_GI_number: 20090576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Methanosarcina acetivorans str.C2A # 48 283 77 338 379 132 31.0 6e-31 MFDIVKDIDQWGKGSLFKYGFLQSLVIMLIFLLCAWLCKRAINRWIRKKEIVNAKFVMRI VKITLYTIAIYGCLSLLTPFESVLGKIWGSAGIIAVVLGLAAQESMGNFVNGLLITTFKP FKIGDLVKVNNGEYEGYVVDISLRDTVIRTYENTKVIIPNSTMNKAVLENVSLTNHTKGN FLTLDIAYESDLDKAMNIMKEEIIRHPAYVDPRTEEDMRNHVEPVIVRLTSFNDSSLTLR ATVYSRDNSEGFAMLSDLRIAIKKRFDQEGIEFPYPHRTITYKEKNDSIADSKQ >gi|312956640|gb|AENW01000009.1| GENE 195 210974 - 212731 1986 585 aa, chain - ## HITS:1 COG:BH2384 KEGG:ns NR:ns ## COG: BH2384 COG0513 # Protein_GI_number: 15614947 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus halodurans # 1 535 5 536 539 409 44.0 1e-113 MTTFNELQISSEVMKAVEEMGYENATDIQAQSIPLIMEGKDVLGRSNTGTGKTAAFGIPA IEKVCQGTRYPNALIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPIDRQIQLLKR GCGIVVGTPGRIMDHLNRRTLKLDNTNMVILDEADEMLNMGFKEDIEEILSMMPEGNEHQ TILFSATWPAEILRITKEFQNDPVRVEIKSAQRTIDTVEQIYYDAPRGKKANALRVLLSH YDPDLCMIFCNTKKMVDELCDELNKHNIKAISLHGDMKQEFRSRVMEQFRSGNYPILIAT DVAARGIDVDDIDLVVNFDIPQDNEYYIHRVGRTGRAGKKGLAITLVSGGKQRAGIRDII RYTKTNIVRHALPTSAQMMEANRNAFVAKVKEACDEGITEESMEIANELMAEGIALENII SALISMTYKNEIIDIEADEDVKRYASAFDAITLKFNVGRNNGVQPGNIVAAIIEESGLNG KAIGRIDVRKDFTLVDVEASKVDAVLSNMQRSHIRGVEVMVEIDSAPKRKNSSRSNGRGT GGKGGYNKGGRSRSYDNSASSSQRRPSRRASGSHDKSVRKSRKEK >gi|312956640|gb|AENW01000009.1| GENE 196 212902 - 213369 506 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402639|ref|ZP_06646739.1| ## NR: gi|293402639|ref|ZP_06646739.1| hypothetical protein HMPREF0863_02883 [Erysipelotrichaceae bacterium 5_2_54FAA] # 30 155 1 126 126 87 34.0 3e-16 MVNYEEKVFHPNLGICDVTGIDKKEKRMVITAADGSTCSIPFESLPRVGVRNLMESDEAD LIMKKLFTPKQESSLPASLTLMQIQQSIVDYKLEQQVQLLIGLLYWKYAEGKKGIRYQEC LSRIEGVLCEELSFVLDLSKDLLVERLEDCYRSMA >gi|312956640|gb|AENW01000009.1| GENE 197 214260 - 214460 282 66 aa, chain + ## HITS:1 COG:SPy2077 KEGG:ns NR:ns ## COG: SPy2077 COG1278 # Protein_GI_number: 15675836 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Streptococcus pyogenes M1 GAS # 1 64 1 64 67 80 59.0 7e-16 MSTGKVKWFNADKGYGFITTDAGQDLFVHYSEIQTSGFRTLEEGAKVNFEINTNDRGDHA ANVTVI >gi|312956640|gb|AENW01000009.1| GENE 198 214782 - 215198 503 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915729|ref|ZP_02077937.1| ## NR: gi|160915729|ref|ZP_02077937.1| hypothetical protein EUBDOL_01738 [Eubacterium dolichum DSM 3991] # 8 127 1 119 124 126 53.0 3e-28 MHRKVMDLQITGLEEQDVVQAAAVKFPGKYIEMGESDLYLPDIEKGSLTIEGIDHPVFAS THYAYEDKLVNGNKTRYKIPLTTVLVKKDKYEVIYDSYGKYYVAYKEEEKIHFVPYEDFY ELLKPLIHMNEEKNEQAT >gi|312956640|gb|AENW01000009.1| GENE 199 215836 - 217149 1185 437 aa, chain - ## HITS:1 COG:all2673 KEGG:ns NR:ns ## COG: all2673 COG0477 # Protein_GI_number: 17230165 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 11 407 1 398 437 176 31.0 8e-44 MNNMKQTIKDLHVFLVLWSTQACSQLGSSMTSFALVIWSLQQSGSAMVSAMLSICSYTPY VIFGLFAGSLCDRWDKKKTMLICDSLAAGSTLVISILLLQGTLEIWHLYILNAVNGCMNT LQQPSSEVAITLLTPKKQYARAGALRMFSNSLNTLLVPVFATSVYALFGMQTILLIDLIS FSVAFTALAFFIRLPAVEAVSAIEKQSLLNGVKSGLHWLRENRGVLDLILYLAAINLVAS TLDAALPYMLLMREGGSEAVLGVVNTCMGLANLAGSLVLMLKPTRHQRVRLIHNALLISM GTESFFLALGREPFVWCLGAFLGWLCIPAMNTNMDVLLREHIPLDMQGRVYAARNSLQFF TIPAGYFLGGALIDYILEPFMAAQGASSLLGRAIGVGEGSGAALLFLLLGFAGIAICLLF RRDSNIWSLETIDEQHK >gi|312956640|gb|AENW01000009.1| GENE 200 218101 - 218826 802 241 aa, chain - ## HITS:1 COG:BH4055 KEGG:ns NR:ns ## COG: BH4055 COG1811 # Protein_GI_number: 15616617 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Bacillus halodurans # 1 235 4 231 236 130 39.0 3e-30 MGTVINAAAVIIGGMIGMLVKGGLPLRVRDLLMRSLGLCTLFIGISGAISAMMQVDGTRL QANGTLLLICSLGIGAVAGELLRLEDRMEGLAHRLQSMVKSRDDKFVEGFVSNALVICVG AMAVVGALQDGLTHDASMLITKAILDGIISMVFASALGIGVVFAAVLLFLYQGAITILAG TLSPLFSDTLIRNLSLVGNVLIFGVGINLLFGKQMKIGNLLPALLIPVVWEALQYLVSGM R >gi|312956640|gb|AENW01000009.1| GENE 201 219124 - 219432 484 102 aa, chain - ## HITS:1 COG:Cj0147c KEGG:ns NR:ns ## COG: Cj0147c COG0526 # Protein_GI_number: 15791535 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Campylobacter jejuni # 14 102 16 104 104 115 58.0 2e-26 MKVINKAEFEQITKEGVVLVDFFATWCGPCKMLAPVLEELAEDMKGKVEIVKVDVDQEGD LAMKFGIMSVPTMIVFKNGEAVKQISGYQPKTQLANILNQLL >gi|312956640|gb|AENW01000009.1| GENE 202 219495 - 220370 1330 291 aa, chain - ## HITS:1 COG:YPO4093 KEGG:ns NR:ns ## COG: YPO4093 COG0561 # Protein_GI_number: 16124202 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Yersinia pestis # 2 288 3 267 269 140 31.0 4e-33 MIQMIVMDMDGTLLTSDNRISSRTKELLLRVQSQGVRLVLASGRSYCKLMEYAEELHMDA YGGYLLEVNGLILYDLASGKRHIRKQMGCSEMEELFTYFRQWDVEIMAQFDDGLFDYNPE TVLKEKAEYRKKHKLSDDYPWTGGAFALLADNRKGYPKIHYINTWEEIDRSINKVSVAYH EDVMAEVSAQAKRDLQERYWLGLTTPKWLELMPLGITKGSGLTALAEMLDIPMHDVMAFG DGENDIEMLQAAGIGIAMGNAMAEVKAAADEVTGSNNDEGIADALQKYFAV >gi|312956640|gb|AENW01000009.1| GENE 203 220485 - 220967 575 160 aa, chain + ## HITS:1 COG:BS_yjdI KEGG:ns NR:ns ## COG: BS_yjdI COG2606 # Protein_GI_number: 16078271 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 2 157 4 159 159 140 46.0 1e-33 MKIQKTNAMRILDKNQLSYEVLSYAHGKEAVAGLDVAKQLEENPEQVFKTLVTVANTKEY IVFVIPVAHELHLKKCAKAAGVKSVEMIHVKDINKITGYIRGGCSPIGMKKQFRTFVHES CTGLPTIMFSGGKIGVQIKMQPDELLKLIHAETADLISEA >gi|312956640|gb|AENW01000009.1| GENE 204 221012 - 221869 1124 285 aa, chain - ## HITS:1 COG:VC1364 KEGG:ns NR:ns ## COG: VC1364 COG0561 # Protein_GI_number: 15641376 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Vibrio cholerae # 4 281 3 267 273 120 29.0 3e-27 MAIKLIALDLDGTLLTTQKTIDEETKKRLIKAQEMGISITIATGRDKGGIDFVYEPLELE HRGDNFVAGVNGQIIYDFHKKEYYVDKVLDGNDAKKVMALGMKYNFEVISCCGYDFYDLI SKRLKAMKKVRSVVFGRPMDYGFNQGKRNFIPLEDADHEITQDVNKFVLIQTASFFKKHL PHLRRELKDYDLLEVGPAWIEVMPKGVSKACALLRIGKKLGISTEEMMAFGDAENDMEMI KTVKYGIAMGNAMDSLKKAAWDVTDTNDQMGIAKALDKYVFTSGE >gi|312956640|gb|AENW01000009.1| GENE 205 222003 - 222725 933 240 aa, chain - ## HITS:1 COG:BH0420 KEGG:ns NR:ns ## COG: BH0420 COG0363 # Protein_GI_number: 15612983 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Bacillus halodurans # 1 239 1 242 246 241 50.0 1e-63 MKVIVVKDYDAVSKEAFAVMKEVVTNKKDAVLGLATGSSPIGLYKNMIQDHKDNGTSYAQ CQSFNLDEYVGIDRNHPESYWTFMHENLFKGIDLPEDKIHVPYGSTKEDCEGYEKAMENV SVDVQVLGIGGNGHIGFNEPGTPFTEETHIVELTEKTRSDNARFFDNDINQVPTHAITMG IATIMKAKKILLVASGANKADAVAAMVNGPVDPACPASVLQNHADVVIVVDEAAAAKLAK >gi|312956640|gb|AENW01000009.1| GENE 206 222922 - 223842 1111 306 aa, chain - ## HITS:1 COG:CAC3378 KEGG:ns NR:ns ## COG: CAC3378 COG4989 # Protein_GI_number: 15896620 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Clostridium acetobutylicum # 1 306 1 306 306 375 57.0 1e-104 MKSISIAGTQAPAIIQGCMRIDAMSVNELEELIHQDLKLGINFFDHADIYGKGVCEELFG KVLKAQPSLRKDMLIQSKCGIHRSETTHYDFSRDYILHCVDASLERLQCGYLDYLLLHRP DALMDPLEVAQAFDALYTSGKVKHFGVSNHNPYQIELLKKYSRQPIEINQMQLSVMHTPM IDAGVNVNTFDQRGIDRDNGTLDYCRLQDITIQCWSPFQYGMFEGVFLDNPKFPEVNARI QTLAKKYQVSSSAIAAAWLLRHPAQMQVILGSVNTARIEGIVQACDITLTREEWYSIYVA AGNLLP >gi|312956640|gb|AENW01000009.1| GENE 207 224291 - 225154 952 287 aa, chain - ## HITS:1 COG:CAC3032 KEGG:ns NR:ns ## COG: CAC3032 COG2017 # Protein_GI_number: 15896283 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Clostridium acetobutylicum # 1 286 3 296 298 170 30.0 3e-42 MKLTNNRYEVTFTAKGGEIESFTDLETGIQYMWQGHPDYWTGKNPGLFPLVGNTLDGTYE MDGKTYAMKNHGLVRYATLDCVRDDGKEVIMAFDSSAETKAQYPFDFHYEVGYALQDDTL TVTYRITNTGERDMPFTFGLHPGFNCPLCEGEAFEDYTMRFSNPEKLKQLVFDPEKKKPY TLEDVELQTIPCSYEEIEKYATLIYQGMKSSYLTLSGPNNHGVRISISGYPYLAIWTAKK NAPFICLEPWYGHADFSRVEEDFSHREGTMTLSAGKTFTTAYTIQVF >gi|312956640|gb|AENW01000009.1| GENE 208 225234 - 226019 704 261 aa, chain - ## HITS:1 COG:PM1555 KEGG:ns NR:ns ## COG: PM1555 COG0561 # Protein_GI_number: 15603420 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Pasteurella multocida # 3 261 9 269 270 109 29.0 7e-24 MKHIKALFFDVDNTLYTHRIHDFPATTRQTLNRLKENGYRIGIATSRCRYEVRNLPAFFR DFAFDAAIFDGGALIMGKEETVTSFPLLQEQVERLIRYCEQRHIPVRYSTFDNDCLTTPC PHNIRDEFFKLYLNMPVVKPYEQETVFNMLAYPQNGEQREEIIALMKDAFIVTHSSNTLE ITAENVDKSKGVEAMAAHWDIPVEQIACFGDGANDVGMLQAAGIGIAMGNANPKAKAAAD YVCGSIDEDGLYHFCKEMEWI >gi|312956640|gb|AENW01000009.1| GENE 209 227104 - 228243 1356 379 aa, chain - ## HITS:1 COG:BS_nagA KEGG:ns NR:ns ## COG: BS_nagA COG1820 # Protein_GI_number: 16080554 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Bacillus subtilis # 21 379 26 388 396 245 40.0 9e-65 MIIQSKRIWVLGQFIEAQLELEDGKIKNVLAYGAKPADKDYGERRIVPGFIDVHTHGAYG FDTNDAEEEGLRNWMKHIPEEGVTGICPTTITQTEEVLTKAVKNVAKVVADGYEGAEILG IHFEGPYLDMVYKGAQPEQCIVKPDVEQFKRYQKAADGLIKIITMATERDEDFELTRYCA ANDVRVSIGHSAATIEEAGMAIANGATSMTHIFNGMTPFHHRKPGLVGAAMRFRDTFGEV ICDGNHSTPDALNDLFMAKGRDYTIMITDALMVKGLPVGTKVLFGGNEIELYPDGSAHLT GAKSLAGSTLKVNEGLKVLVEKAMIPWDYAINSCTLNPARYLNVDDRKGKLVAGYDADIV VLNDDYSVEMTYVRGKEAF >gi|312956640|gb|AENW01000009.1| GENE 210 228447 - 229646 1422 399 aa, chain + ## HITS:1 COG:AF1520 KEGG:ns NR:ns ## COG: AF1520 COG0426 # Protein_GI_number: 11499115 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Archaeoglobus fulgidus # 3 393 101 487 488 313 42.0 5e-85 MKQAIQIKENMYWVGVHDFNCRHFHGDLFPIAEGTTYNSYLIVDEQVTLIDTVEEEFYDT MMERIRSVIGERTIDNVIVQHAEPDHSGGFLKFMKDYPNARPYASNAGVGIMLKQYFKSY DFQRVKTGDTLSTGRYTLTFVEMPMIHWPDNMLTYVAEQKIAFSNDAFGQHIASYDIFDD AHGAAKCIDRAKDYYANIVMPYGMQVANKLKQIRDMNLDIDMIAPAHGIIWRSYLPELFQ AYEDFATFKAVDKAVIVYESVWKHTQMMAEALAEGMGRNGICVKIFKCSMTSPAIIQKEL LDAKAVLVGSGNYNNAMAGSIAAFLEKLITCKVKNKKGLGFGSYGWANLVTKEINARLEK AGTTLLNDEVVSQNYTPSEADLDALMELGKQIAEEIKAM >gi|312956640|gb|AENW01000009.1| GENE 211 229859 - 230755 783 298 aa, chain - ## HITS:1 COG:DR1111 KEGG:ns NR:ns ## COG: DR1111 COG0789 # Protein_GI_number: 15806131 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 1 96 1 96 137 59 34.0 6e-09 MKLQEVAQQVQMTKRAIKYYEEKGLLQVEKDENGYRRYTEEHIAVLQQIQVYRKLGMELS AIQRILHDPQVEQEELQRLEEQMQRHLEQQSAQLEAVRQMLAGTKDYRVLQEQLDYQTIA AAIQEMIPGFYGKLFLYHFLPYLQIPITTQEQRDAYQAILTFWDTTDLKMPLSMRIVTFL TGFLQNQQAAAIQARLDAQLKRLLEPNAKQYAQMKKAVLHQYRVQKYCLLRYLPSSISKR HWMMELQRSGYNDIFLPNMEKLSPAYREYRNALSAINDRICSELNLGYDEYFHLMKKS >gi|312956640|gb|AENW01000009.1| GENE 212 231150 - 231767 646 205 aa, chain - ## HITS:1 COG:SA0746 KEGG:ns NR:ns ## COG: SA0746 COG1525 # Protein_GI_number: 15926468 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Staphylococcus aureus N315 # 23 156 88 224 228 94 39.0 9e-20 MKKIMFFCLLALMAALPVQANTREEVEFSKCTDGDTAHFKINGKDTTVRFLAINAPEYTK TKEPYGKEASAYVCDALKSAETIELEYDDGSDKLDKYGRTLAWVFADDVLLQKELVKKGL AEVKYLYGDYAYTKELQTLEKEAKKEKLNMWSDGSAAEEEQNETIQYVLGAAGGIILIIF GLFFAKGKRNKQRYIRKGVKQLRRK >gi|312956640|gb|AENW01000009.1| GENE 213 231813 - 232088 189 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNPVEKMNELQRRVDAVNHRVMKKREQLMKPTKKQMEISVLVSTGGSIVFLIVAGVVYFV YHLHLQAASCTAIAGLLLLNAGIMKNKKSKS >gi|312956640|gb|AENW01000009.1| GENE 214 232085 - 232891 722 268 aa, chain - ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 10 78 7 75 125 62 44.0 1e-09 MQQKEIGMQISAARKKLKYTQRELAEKLGVSDKTISKWERGVGYPDISLLLPLCRELGIE VSQLLGDEETDTQKQGNEKNLKNLADYAVLKVKENRERIQRWIWIMLSALAVLSIGICLL CNYVLEGAISWAWIAAVSVIYGWMILTALLMSHRYLIEKTMLVGMVMLFPYLYCLSLQLP ISNFLPLTWTIAAAADVFAVLIYLVLLHSRISLWFKLAIIVILSGFFNSFVQWLTEGGLS QMLLQLFGNLFAAVILAIVGIYARGHAK >gi|312956640|gb|AENW01000009.1| GENE 215 232963 - 234027 916 354 aa, chain - ## HITS:1 COG:CAC2451_2 KEGG:ns NR:ns ## COG: CAC2451_2 COG0500 # Protein_GI_number: 15895716 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 133 322 6 198 216 137 36.0 4e-32 MYKIKELAELYGIHTNVLRFYEKKGLLASRRLTNGYRVYGEDERAILQKILLYRAMNFSL ADIRELLSREKGNAQELYFQQLQLLNAHLHELTAVRDHISQELNAMLANTYEEQQDQKEM QRLLQEINKNREWKDRWDFDSFAKVYDEVVHMPTAQGLPFYEAYDHVLDETAKHAQMHGG RVLDVGCGTGNLSERLAAAGLSVEGVDQSLEMLIQAKKKLPDMLLHQGTFLSLPFEKCSF DTITASYAFHHCDAQERLLAVREMKRVLRRQGCIVIADLMFEHAQDRMKYEQHCTPQQKA ELEDEYFTTVEELTHIFSEEGFICTNYKVSDILWIFVADLSEEDRECRKNKRFI >gi|312956640|gb|AENW01000009.1| GENE 216 234181 - 235101 1109 306 aa, chain - ## HITS:1 COG:MA0936 KEGG:ns NR:ns ## COG: MA0936 COG0719 # Protein_GI_number: 20089814 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Methanosarcina acetivorans str.C2A # 36 305 49 319 320 84 29.0 3e-16 MEQMEKNLLKTVADISGFMPGSAFSLRKNGAGVERHSTEHVKILAKTDKPGIDIIVDDNT VGESIHIPVILTDSGIQDMVYNDFYIGEGADVEIVAGCGIHNDGCDTSQHDGIHTFHIGR NASITYTEKHYGEGSGSGGRILNPTTVIHMEEGSFAKMDMSQIKGVDSTFRKTEANLGAT AKLVINEKLMTHGEQKAHSDVTVNLNGEDSVVQIVSRSVGKDTSVQVFHPIAVGNNRSRA HIQCDSIIMGKAKISSIPEIAANHVDAEIIHEAAIGKINNDQLIKLQTFGLNSEEAEKVI VDGFLK >gi|312956640|gb|AENW01000009.1| GENE 217 235111 - 235815 201 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 226 245 82 25 2e-14 MLELRNVSFEVDGKKILNNISLTMEDNRFTVITGPNGGGKSTLAKLIMGIEKPTEGEILF DGEDITAMSIDERAKRKIGYAFQQPPRFKGMSVRKLLSLAHGKDLDEEICCSYLTDVGLC SKDYLNRDVDASLSGGEVKRIEIASILARDLKLSIFDEPEAGIDLWSFAKLVETFQKLQR ESRQSIILISHQERIMQLADEIIIIENGAIKTKGKRDDILPSLMSEFDSCEFKK >gi|312956640|gb|AENW01000009.1| GENE 218 235817 - 236017 67 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHYLQKHRRASEYGYQRYVSLVFCKYAQNLEVNRNTICCIFLFSFLNHYIFYSICDKIEK ALEKER >gi|312956640|gb|AENW01000009.1| GENE 219 236441 - 237361 1133 306 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_2679 NR:ns ## KEGG: Dhaf_2679 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 22 292 51 325 337 101 31.0 3e-20 MKKDIVELRHQLQKIESDKLYLEECIERLHEVESALRQAEKQLKKETRDVEKLNTASVAS ILAFFAKDKEERLVKEEQEALQAALHVRQLQENAKALRQDMDACELNIVQEELVRKQLAE CELAEAIQHSPYGEALREQKQLVDAHTQRLKEIQEALEAGYLVLDQLKNALRSLDSASSW GFMDIAGGGILSTAMKHSAVDKAQKKIALLKINLYKFQKEVQDVQGFQINTVKLSDGTVA MDYLFDNIFTDMFVQSKIRESEKSLQQAKRRIDQIMDSLLQERQHTQQQLEREQAAYERM CRESVD >gi|312956640|gb|AENW01000009.1| GENE 220 237843 - 239201 1789 452 aa, chain - ## HITS:1 COG:lin0538 KEGG:ns NR:ns ## COG: lin0538 COG2848 # Protein_GI_number: 16799613 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 452 1 451 451 555 67.0 1e-158 MINVHDILETIKMIDEEYLDVRTITMGISLLDCCDSDIDKSCEKIYNKITRLAKNLVKTG EDIEREYGIPIINKRISVTPIAMLVAVSGGDPVKYAHTLERCAQAVGVNFIGGYSALVQK GCAAGDRELMESIPRALAETEHVCASVNVGSTKAGINMNAVELMGRMVKEAAELTKDRNC IGAAKLVVFCNAPEDNPFMAGAFHGVGEADCVINVGVSGPGVVRAALAKADKSLPMNELA DIIKKTAFKVTRMGQLVGTLASERLGVPFGIVDLSLAPTPAIGDSVAYILEEMGLESCGA YGTTACLAMLNDAVKKGGVMASSTVGGLSGAFIPVSEDAGMIAATRAGTLCLEKLEAMTA VCSVGLDMVVIPGETTPEVISGIIADEAAIGMVNSKTTAVRAIPAIGKKVGEELEFGGLL GSGPVMNINQTDCSVMIHRKGRIPAPIQALKN >gi|312956640|gb|AENW01000009.1| GENE 221 239214 - 239483 388 89 aa, chain - ## HITS:1 COG:MK1213 KEGG:ns NR:ns ## COG: MK1213 COG3830 # Protein_GI_number: 20094649 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanopyrus kandleri AV19 # 2 89 3 90 90 71 37.0 4e-13 MRAVVSVIGKDMVGILAKVSAECENANMNVIEVSQTLLQDMFAMIMLIDITKGNTTLADF AAHMENVGKQSGLTIHVMHEDIFNSMHKI >gi|312956640|gb|AENW01000009.1| GENE 222 239588 - 240103 586 171 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401925|ref|ZP_06646065.1| ## NR: gi|293401925|ref|ZP_06646065.1| hypothetical protein HMPREF0863_02206 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 171 1 171 171 215 61.0 1e-54 MNIEIGEVFPSAIEEEGTVMDFVDDEFVFVIKDEVWMDEECQAMKHNPLTLDFVYKYDIA VFLLTLEDAVDTSDFIFNVHDNEYPEHLYRSFENGDGYGMTLYLINSMNTVCAKRRVRLS QGMSNTISQYLAKQKQAPFMEEEFLCNLQGLQSAWEPFEMQKMALGSETFK >gi|312956640|gb|AENW01000009.1| GENE 223 240132 - 241253 1303 373 aa, chain - ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 70 362 52 347 351 95 25.0 1e-19 MKHANLKALRRRLFIKYACIIIGITLGTITLIYLFDDVLNGVVIDFIRLFMETGDPFAMF RKIYMIVLPLLIVAAIILMIYFLCRDLVNYMRILMRGMEDVMRKDRSRFDFPKEMKEAEQ LIMALSDDYQNYLKAAAQDEEKKKDLIYLLAQDIKMPLSNILMYLEFLHKETRISPEIQK DFVIQVLHKSLDLEDMINEFFDITRFNLQYAKWNPEHMYLDRMMEQVVDEYYMLMEAKQM EVSIESGSGLALFADNEKIARVMRDLLRNLVELGRVKATIHIRMQEFDERYEVLMEVESR HLSAYQIAHIFHNYYRLEDVHGEGNLHVLGLGIARQIMDMQKGTLRASSIDKLLSFTIQI PKAFVPGHKESVV >gi|312956640|gb|AENW01000009.1| GENE 224 241250 - 242350 1142 366 aa, chain - ## HITS:1 COG:lin2515 KEGG:ns NR:ns ## COG: lin2515 COG0642 # Protein_GI_number: 16801577 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 97 359 120 378 380 135 30.0 1e-31 MKNSTYRRLRKHLAYLYLFMTALVMGIIGILMFLLDHYAQVFSNQGALRDSDFLLFYLKH ELEFNLFLLAAGTALLLYLFVLLFFQNLDVLLDTVQGKPVDRLPFSYRYLPEMDMARGRI QDMLEKKQHTRQLSVQEKEHKNELLMYLAHDLKTPLTSMIGYINHILDHKVDQEQLDTSI RITYEKAQRLDDLIDEFSEILRYDDKVSQLEVTRIDLNTMLQQQLAGFYPLMEEKGIRLQ LHLADHMEISGDFDKLQRVFDNLMRNAINYSIPQTEIRIAGMLYEDGVCLTYSNEGEAMD TASVQHLFDKFYRAGSARTSTSGGAGLGLAIAREIIELHQGEIKADMEGTTITFTLRLPY EQKVIL >gi|312956640|gb|AENW01000009.1| GENE 225 242340 - 243029 905 229 aa, chain - ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 229 6 231 233 238 52.0 7e-63 MQTKILVLDDEKEIADLVALYLNNEGYEVHKFYDSKDALEYMKNNRVDLALLDVMMPEIS GFEICRIIREKYMFPVIMLTAKVEDVDKIQGLSLGADDYITKPFNPLELVARVKAQLRRY KKYNPSQENVNVIDFKGLIIDNDSHRCTLYDEVLNLTPIEFSILWYLCKNRGRVITSEEL FEAVWKKKYFDSNNTVMVHIRRLREKMHEPPRNPKFIKTVWGVGYQIEE >gi|312956640|gb|AENW01000009.1| GENE 226 243179 - 244186 965 335 aa, chain + ## HITS:1 COG:CAC1267 KEGG:ns NR:ns ## COG: CAC1267 COG1686 # Protein_GI_number: 15894549 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 72 317 37 284 425 123 34.0 6e-28 MRNIRKRWWLVAAAALLLLFLDVAMYIQIKEYYPDFMKQEEASTPVTGQGLDANQQNIKK RLESMTLNSRYAMVIDLQDQQVLYEKNSDERLFPASLTKVLTAIVALDNMENLHKKITIT EQDIEGLAEANASVAGLEAGEQVTLEDLLYALILPSGADGANALANHLNGSISKFVKDMN EKANGMGMLHTHFTNTTGLQDKQHYTTLQDMKKMMDHAWKNPAFRKVMTTLRYTIPATKQ HPNGLKLRSTLLFYDKDLKFPGGKIIGGKSGFTPEAGYCLISVARMKDGHQYMVISAKAE KIEKTLVEEGGSATEYGNVMDAKAVYTAIADVKNK >gi|312956640|gb|AENW01000009.1| GENE 227 244615 - 245544 1268 309 aa, chain - ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 1 308 1 307 309 326 54.0 3e-89 MAKMATREAYGKALAELAKENKKILVLDADLSGSTKTGEVKKVAPEQHFNFGIAEGNMMA AAAGMATSGNIVFASTFAMFAAGRAFEQVRNSICYPHLNVKVCATHAGLTVGEDGASHQS VEDVALMRSIPGMVVVSPADGVETKAAIRAVAEYDGPCYVRLGRMAVEDVYTEDTLNFQI GKGNVIRKGNSVALIATGIMVEAAMKAADILKENGMDVTVVDMHTIKPIDEELIVELTKD HDLFVTCEEHSVIGGLGSAVAEVLSQKAPKKLAMVGIKDTFGESGTPAALLEKYGLTAND IVKAVEDNK >gi|312956640|gb|AENW01000009.1| GENE 228 245544 - 246371 880 275 aa, chain - ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 1 270 1 269 270 333 58.0 3e-91 MYQLEDLKGKANNIRKNIVKTVTEAKSGHPGGSLSSVEIATAIYFTQMDITPDNVASTNR DRFVLSKGHASPLLYSVLAEKGLIEEEELLTFRKINSRLQGHPSMRKLPGVDMSTGSLGQ GISCAVGMALANKYNKEDHRIYTILGDGECQEGQVWEAAMAASHYKLDNLLAFVDHNGLQ IDGNVTDVMNPTPIDEKFKAFGWNVIVLENGNDLESVIAACEEAKTVKGKPTVVVAHTVK GKGVSFMENKAGWHGTAPSAEQCAEAIAELEGGCK >gi|312956640|gb|AENW01000009.1| GENE 229 246544 - 248691 1653 715 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 8 711 10 719 764 641 47 0.0 MEHIIQPMAASLHIQPEQIKNTLQLLEEGNTVPFIARYRKEVTKGLDEEQIRVIQEQYEY QVNLEKRKEDVKRLIEQQGKLTEEIIASVNACEKLSQVEDIYRPYQQKRKTRASDAAARG LKPFAEWMLKLLRDGDVRQEAKRYLNDKVSDVEAAIQGAKDIIAEMASDDPAVRQKIRSS MERYGKLTTKEKKKHTDEKKIYKMYYDYSERVTTLASHRIMAIDRGEKEKVLAVSIEFDK EYIIDWTNRRFTKKRQSPCVEYIEEAVQDGLKRLAFPAMEREIRSQLSEKAHEQSIEVFS LNLERLLMQPPMKNKMVLGFDPAFRTGCKLAVVDKNGNMLDVSVIYPTPPNAKIKEAKEK MLQLLKKYPIDIIAIGNGTASRESEAFVAALIREYHLSAAYTIVSEAGASVYSASKLARE EFPDLHVEQRSAISIARRIIDPLSELIKIDPQSIGVGQYQHDLPTARLKDRLDFVVSKAV NRVGVNVNTASQELLKNISGLSQATAKSIVEYRREHGELKNRKELKKIPKIGEKSYEQAA GFLRIEDGDELLDRTSIHPESYATARKVLQQLGLSEQDMGSEQAQEAVQQADADGLIRDC ESDRYTIQDILEAIATPLRDYRERYDAPLLRSDVLELEDLHIGDQLEGVVRNVVDFGAFV DIGLHEDGLVHISKMSRHRIAHPSDKVSIGDIVKVWVYNIDEEKQKVQLSLLPMQ >gi|312956640|gb|AENW01000009.1| GENE 230 249074 - 249709 570 211 aa, chain + ## HITS:1 COG:CAC1657 KEGG:ns NR:ns ## COG: CAC1657 COG1357 # Protein_GI_number: 15894934 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Clostridium acetobutylicum # 1 210 7 216 216 135 31.0 4e-32 MKIVQPRLRPSYARAQSLYACIDEDNYVEGMEFDGITISNEEYTALHLDGCVFRNVFFED CEFDAIDMIDTVFENCELSNLHFNKGAIHRCVFRNCRCMGIDFSDCVIHNTLFTNLKAAY ANLSGSRFRQVIFENSNFSNASFIQCEYQKTVYDSCDLRESEFHNTNLKGMDLSSSDIEG ISLTMDHIRGVIVNEQQALRLVQLLGIIVKE >gi|312956640|gb|AENW01000009.1| GENE 231 250112 - 251038 506 308 aa, chain - ## HITS:1 COG:TVN0764 KEGG:ns NR:ns ## COG: TVN0764 COG0675 # Protein_GI_number: 13541595 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma volcanium # 1 288 121 387 416 190 40.0 3e-48 MIFTNQICKLRKDKHGWYVKFPKAVLQAGCIRDRYDLGKMDLHEQKLKEVRLIPNGDTIK LEIVCEIEIKEPTITIHEATRVAGIDIGVDNLTAIAFTSGHHPVLIKGNEIKAVNQFYNK QIAHYRSLLRTGKKDSEGIHQTKRMKRISEKRNRRVKDILHKASRKIIDLCVEEGIEVIV VGNNAGWKKRIHIGKKNNQTFVQISFHTLIEMIKYKGEAAGIRVVICEESYTSKASSIDE DQIPVYGNDVTHAFSGKRIKRGLYRSKNGILMNADINGASNIIRKVYPCMPKRERWSRGT VNVPVTCI >gi|312956640|gb|AENW01000009.1| GENE 232 251159 - 251383 69 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQYVLICLRRKSTVIDLVTQFKKNIQMLHGNKAMFMINDVEWCAMMLLTYDIPFINDTIE FFQDLYLMWKAILI >gi|312956640|gb|AENW01000009.1| GENE 233 251972 - 253195 1532 407 aa, chain - ## HITS:1 COG:CAC0476 KEGG:ns NR:ns ## COG: CAC0476 COG2195 # Protein_GI_number: 15893767 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Clostridium acetobutylicum # 3 401 4 403 408 417 51.0 1e-116 MNVQERFLHYVSFDTQSDEHSQTTPSSLKQLKLAEALVDEMKAIGIEDAYVDEFGIVYGT IPATTKKDVKSIGFIAHMDTSPDMSGRDVKPRIVKSYDGSDIVLNEELGIKMGVHDFACL QEKIGEDLIVTDGTTLLGADDKAGIAEIMTMAETLLQESREHGKICLAFTPDEEVGRGTD HFRIPEFGADIAYTVDGGEVDCVDYENFNAASAEIQIQGLSIHPGSAKDKMINALLVAME FHSMLPVQKNPAYTEGYEGFHHLTDLHGECEHAYMSYIIRNHSEELFEQQKAEFQRVADY LNQKYPENTIQLQIHDSYANMRTIIEKDMRIIELVKTSMKQIGLEPRSMAIRGGTDGARL TYDGLPCPNLGTGGYNYHGKYEFASIQEMQKSVELLLKIVENNVQEA >gi|312956640|gb|AENW01000009.1| GENE 234 253257 - 253703 588 148 aa, chain - ## HITS:1 COG:no KEGG:CLM_1840 NR:ns ## KEGG: CLM_1840 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A2 # Pathway: not_defined # 8 144 10 146 151 67 27.0 1e-10 MDNNAIVEELNQLLKGTHMGIGIFEDLEGKLQSERLKTEFHGLLDKLKMHAHSLSALIQT CGGDPVESAGWKGMVTDAVEMLKNLMISNDKQVLEEAVKNMKMAQKALHAFDEKHLVLND QMKKTMRIMQEDYESMYHMLHKYLIEFQ >gi|312956640|gb|AENW01000009.1| GENE 235 254827 - 255111 366 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401939|ref|ZP_06646079.1| ## NR: gi|293401939|ref|ZP_06646079.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 93 1 92 93 72 41.0 7e-12 MKLMFIIAGDEYAADISEKLKEHAFMATEVGSTGDFLQYGQTVLLLGVNEQDCDRILSIL DPEADWKGTEHGFPFHEEVSIFVTDVNDYVKVNA >gi|312956640|gb|AENW01000009.1| GENE 236 255231 - 255665 537 144 aa, chain - ## HITS:1 COG:CC0895 KEGG:ns NR:ns ## COG: CC0895 COG1733 # Protein_GI_number: 16125148 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Caulobacter vibrioides # 9 137 12 142 167 99 37.0 3e-21 MKKQYDMHCNIAQTLNLIGDRWTLLILHAVREGRRTYKDLQEGLEGIPTNLLSSRLKSLC EDELLSCSLYQEHPPRYQYELTDKSRDLDDIYNAMMIWGDRHLHKSYKCLKHKDCGGAVD IQYVCRECGKVIRKEDLIAKPVEG >gi|312956640|gb|AENW01000009.1| GENE 237 255709 - 256935 1190 408 aa, chain - ## HITS:1 COG:SPy1559 KEGG:ns NR:ns ## COG: SPy1559 COG0785 # Protein_GI_number: 15675452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Streptococcus pyogenes M1 GAS # 8 231 3 232 236 142 35.0 1e-33 MLNPNDVLSHISFLLVFLEGLLSFLSPCVLPLLPVYMGYLAGQDQEQPHSQRRIFLLTVS FVIGIFTAILLMNISVHVLSSFFKDHMVYFVRIGGILIVLLGLHQLGIWKFKSLERTWKL PFQKKGSVNAVIAFLMGFTFSFAWTPCIGPALSSILLLASSSGSLWVSTFLMIVYALGFT IPFLILGLFTGKVLHWISNHKNIMNIAVKLGAVILIAIGLMMFTGKMNTISSYMSTSDKA TAKKDTDTATPEQEEEAADTPDAQTSAEQLDFVLTDQNGKQVSLGDYRGKVIFLNFWATW CPPCQRELPHIQELYEKYRNSDEVAVLTVVNPGGQEKSAEGIRAFLDEHAYSMPVLFDDG SMYYYFQITSMPTTFMIDKNGKPFGYIKGQLTPDMMENMIQQTLSGKK >gi|312956640|gb|AENW01000009.1| GENE 238 256945 - 257259 616 104 aa, chain - ## HITS:1 COG:SA0992 KEGG:ns NR:ns ## COG: SA0992 COG0526 # Protein_GI_number: 15926729 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Staphylococcus aureus N315 # 4 104 3 102 104 105 49.0 3e-23 MSNVIHAKEAEFNELIQKEELVLVDFFATWCGPCKMLAPEIEKLADEFEGKAKILKVDVD QEQALAMRYGVQSIPTLIVFKNGVQTEKRLGYQPYPKLKEMLNR >gi|312956640|gb|AENW01000009.1| GENE 239 257397 - 258647 423 416 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 411 26 444 458 167 27 4e-40 GKRVAMIEKSNQMYGGTCINEGCIPSKSLIIQADKQSYGQAVERKEALIEKLRKKNFDKL DSLEPVDVITAKASFVSDHEVHVQGAGVDETLYGDYIFLNTGSVSNIPNIKGIHEARHIY TSAEMMKERSLPAKLAIIGGYIGLEFSSMYARYGSTVTVFEHGSRLVKREDQDVADEIQK VLEKQGVGFVFESSVKEFANDGEQVVITYDDAHGIQQKLTVDAVLLAAGRSANTKQLHLE NTGVKLDQRGNVIVNEYLQTSVPHIYAMGDVKGGLQFTYISLDDYRIVKDHLFGNKQRTT KNRGQIAYSVFISPTFSRVGLSEQEAREQGYAVKTVSMPAAAIPRANVISQPDGLLKAVI DTKTDQILGCVLFCAESEEVINFVQLAMNQRLTYQEVGNHIFTHPTMSEALNDLFS >gi|312956640|gb|AENW01000009.1| GENE 240 259256 - 259840 191 194 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 30 192 28 192 192 78 34 3e-13 MKQEIFEQLKRELCACRLCEGKFDHEPRAIFQGAQDANIMQISQAPSIHVHNSGLPFHDA SGKKLRREWYQIDDAQFYDEHNFYIASMGHCYPGKGKQGDKKPPRICARTWLMRELDAVD NQLYIIIGAMAAKELFPERSFEELVFHDQQLRGKPALVLPHPSPLNVRWMKEHPQFEADR LLHIRRLIHRALQL >gi|312956640|gb|AENW01000009.1| GENE 241 259849 - 261273 1717 474 aa, chain - ## HITS:1 COG:lin2806 KEGG:ns NR:ns ## COG: lin2806 COG0232 # Protein_GI_number: 16801867 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Listeria innocua # 4 474 1 464 465 343 41.0 5e-94 MHRLSWNSITSETRIPQKTSANAEKYRSEFESDYHRIIRSASFRRLQDKTQVFPLDNSDF VRTRLTHSLEVSSIAKLIGKQVCIQVLDQQLAPAGDQPDSLKVIEILNCAGLLHDIGNPP FGHFGESAIRNWFEKNLSLLQFKQRPLQAWLDEQQQADLLYYEGNAQALRIITKLHRLTG RSGMHLTSSVMDTIIKYPVNSLEKLAEDTKEKSKRSLLRKKVGYYQSETDQFLEIKQNTG TTGCRNPLCFILEAADDLAYTFADLEDGYKKGLYSYEQLLDVIVEAQDERGAELLRQGLE EGRQLKKTSEKGFDPYQHAVFTWLTKKQLFSISGVSDAFLKHYDAIMNGEFDQELLAVSK EGQLIRSLKQFAFDRVYNDAAILKLELMGNEIITFLLDRFMDALLPYDSGLNMSEIQEKY IDLLSGNYLNTYQYTAQDKEDGERLYLRLLLGADFVAGMTDSYAIRLYQELKGI >gi|312956640|gb|AENW01000009.1| GENE 242 261863 - 264463 2757 866 aa, chain - ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 3 632 2 640 644 499 39.0 1e-141 MNNINIGMLAHVDAGKTTLSESLLYVSGSIRQLGRVDHGNAFLDYDAQEKDRGITIYAKQ AIFDWKDTRITLLDTPGHVDFSAEMERVLQVLDYAVVIINALDGIQSHTETIWKLLQHYH VPALVFVNKMDVSHTERTQIMEDLKRHLDEHCVDVTLQDEACQEQLAMCSDELLESYMET GGITDEQLADAVAQRTIFPCCFGSALKMEGIQEFLDMLNSCTKAPAYPEAFGARIFKISR DENGNRLTHMKITGGSLKVKTKLAEDEKVDQIRLYSGTRYQLCEEACSGCVCAVKGLTGF HAGDGLGFERSRQEVQLTSFMNYRVQLPTGCDPFVMLKQLRQLAEEDPQLHVSYDTHLKE LHVRLMGDIQTEVLKHTIQERYHTAVDFDEGSVVYKETILNTVEGIGHYEPLRHYAEVHL LLEPLPRGSGLLFESDCKDEVLDRHWQRLILSHLQETEHVGVLSGSPITDMKITLLCGRA HQKHTEGGDFRQATYRALRHGLRSAESILLEPYYEFTLRIPPSCVSRAVFDIERFHGTFT LQEDSGEMSVISGSAPVRKLQSYPQEVYAYTKGKGRLFCTLKGYEACADEEDVLKEVAYD CDADMDHPCGSIFCSHGAGYYVPWNEVKQHMHMQSDWGRMQLKRESYQSYTAKPVDEKEL EEIFIRTYGPIKRRPPQKAKPASNIIDLEKQNICYQPLPECLLVDGYNVIHDWEELKAMA KEHLDAARHRLIDIMCSYQGYRGCELILVFDAYKVKAGIGSSHKEGTIHVVYTKQAQTAD MYIEQATHQLASEFRVTVATSDGMEQLIASGQGASRMSSRQLYAEVLRMKNTSVKEFERK QLRGGAEPLKKLREYRIEDADEEMKS >gi|312956640|gb|AENW01000009.1| GENE 243 264981 - 266333 1395 450 aa, chain - ## HITS:1 COG:FN0667 KEGG:ns NR:ns ## COG: FN0667 COG0534 # Protein_GI_number: 19704002 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 10 419 12 421 426 252 35.0 1e-66 MEVEESKNLMTEGTIWKKIIFFALPLFLGNLFQQLYNTADSLIVGNFLGSNALAAVSSSG NLIFLMVGFFNGIAIGAGVVIARYFGARDIDNMQRAIHTTVAFGLVSSLVLTVLGVLLAP QILIWMDTPANVLPQSVTYFRIYFMGSLGLVMYNIFVGILQAVGDSRHPLNYLIISSIIN IVLDIVLIVVFHMGVGSAAFATILSQFVSAFLCMNRLLRTKDSYRLSLRKIRFHKDMLAL IIRYGLPSGLQNSIIAIANVVVQSNINGFGEMAMAGCGAYSKIEGFAFLPITSFTMALTT FVGQNLGARQYERTKKGAKFGMLCSMAIAEVIGIVIFLGAPLLTAAFNNDPQVVMFGTER ARTSAMFFFLLAYSHCISAILRGAGKSMVPMIVMLLFWCVVRVTFLTVMIHFLNDIAVVY WVYPLTWSLSSIAFFLYYRKVNWMHAFEAA >gi|312956640|gb|AENW01000009.1| GENE 244 266472 - 267032 325 186 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|164688271|ref|ZP_02212299.1| ## NR: gi|164688271|ref|ZP_02212299.1| hypothetical protein CLOBAR_01916 [Clostridium bartlettii DSM 16795] # 10 174 69 233 256 107 37.0 3e-22 MLSFCNTTLYKGRQFEKNYEAGEESAQVLLTEKRSYDRRAAGAMLFWLTFLAIPGYLYCN GLLDRIWIFLLFTLSNFSVFFAIFGWCPFHSIFIRPDCCMECRIYNWDSFFQYSFLIFFP NVFTLTLVLLGVLSLIVWEIRHALHPERFYKCSNARLTCENCDLDGCRKHKKKLFHKTLK EEYRNK >gi|312956640|gb|AENW01000009.1| GENE 245 267172 - 267879 557 235 aa, chain - ## HITS:1 COG:no KEGG:BHWA1_00415 NR:ns ## KEGG: BHWA1_00415 # Name: not_defined # Def: hypothetical protein # Organism: B.hyodysenteriae # Pathway: not_defined # 1 233 1 231 231 188 38.0 1e-46 MKVTLLHGQNHRQSSWHAAHLLLEQLPVEALHEFYLPKDMPHFCCGCYRCMELGEDFCPH TAYMAPIMKAMKEADLLIFTTPTYCLRTSGSMKAFLDHCFLNFVVHRPLPSMYHKQAVIL ASGAGSGMKKAAKDIRTSLTGWGISHISSYGFRSMATTWEAVPENIKRRLTTDLAKLASR IKRKQHHKRISWKQKLLFHAMRQMQKHGMGAGELDYQYWKERDWLGRSRPWTDDE >gi|312956640|gb|AENW01000009.1| GENE 246 267881 - 268510 693 209 aa, chain - ## HITS:1 COG:DR2148 KEGG:ns NR:ns ## COG: DR2148 COG1309 # Protein_GI_number: 15807142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Deinococcus radiodurans # 3 116 19 139 204 63 33.0 2e-10 MKQLSTKERIRTEALHLFAQYGYDAISVAQIAKAVGIQAPSLYKHYASKEDIFLAIIKEM EKRYAQHAAGMQINGSDAEEDGKLYTRITDDQLIDMGVHMFSYFLHDAYESSFRKMLNME RYHNQRLAELFQKQYFDDAIAYQTVIFQHLMKAGILKPLDPQITALQFYSPIFLLLQLCD SNPQYERTAIELLQQHIRQFLKLNSTKGD >gi|312956640|gb|AENW01000009.1| GENE 247 268809 - 270227 1589 472 aa, chain - ## HITS:1 COG:PAB0151 KEGG:ns NR:ns ## COG: PAB0151 COG0034 # Protein_GI_number: 14520439 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Pyrococcus abyssi # 3 467 12 439 447 180 31.0 6e-45 MSGFFGVASKENCVLDVFFGVDYHSHLGTRRGGMAIHGEKGFARAIHNIENSPFRTKFEK DIEEFDGNLGIGCISDNEAQPLLVKSHLGSFAITTVGRINNLEELQSLCFERGVTHFLEM STGEVNPTELIASLINHKATIVEGLQYVQSLVKGSMSILLMTQYGIYAARDLLGRTPIVL GEKETGFCATFESSAFLNLGYHHYRDLGAGEIVFITPERIEVLQKPREKMKICSFLWVYY GYPTSTYEGVNVECMRNRCGELLAGRDDVEVDSVAGVPDSGIAHAVGYSNVSSVPFARPF IKYTPTWPRSFMPTGQMQRNMIAKMKLIPVQELIRDKRLLLIDDSIVRGTQLGETTEFLY ESGAKEVHVRPACPPIIFGCKYLNFSRSKSEMDLITRRVIRKLEGDDVSSEVLAEYADPD SERYQKMCEEIRQRSNFTSLRYHRLDDMIASIGLDKCKLCTYCWDGKEDDEE >gi|312956640|gb|AENW01000009.1| GENE 248 270863 - 272656 236 597 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 355 573 132 347 398 95 31 2e-18 MDVNAWQEIKKFTGIVRLSNPHIVWIWGGYGITNALSPFITLYYSAEILNQLIVKEYTAA FQTALLMCTGVLICSLLAKAFYNRLQVICRTAVQRIDQKLLYKAMRMEYELMETQETMDT LRRTRNSSNGSGKIDSAIENFALCSSSLCTILLALLALGTLMLQIRTWDIYLLLLLAVLA VFLLFKNAFAKKHGALLEKLCKENDHNNALVNYLWSLFYRMETAKEIRLYHMDPLFEVKN EKLMQDPAFRSFGKDNGKLLFQSDLLGQVLSFSAYIYVATLAMRSIISIGQVLYMAGIIL KAVDAIAQFQVDYAQLRHQLSYLNAFYDFLHLPNMHYDGTLPIEKRDDGEYEFEFRHVSF RYPQQKNDVLHDVNIRFHLKEKLAIVGMNGAGKTTIVKLLCRLYDPSEGEILLNGINIQK YDYAEYTSIFSVVFQDFALFSYPLDENVAGASAPNAKRIASVLQRLDIWERIKSFTDQEH SLLFTDYANGVNVSGGEAQKLAIARALYKDAPFVILDEPTAALDPLSEAEIYEHFDMLVQ GKTTLYISHRMSSCKFCDRIIVMEQGEVEEEGTHDTLLKENGVYAQLWNAQAEYYSE >gi|312956640|gb|AENW01000009.1| GENE 249 272628 - 274439 206 603 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 362 573 28 231 318 84 29 6e-15 MKKTIPGNMLYLLNILWKIDRSTFWSMQLHILLGAIVPFISVLIPSVIINLLLKERSLST FVFVLGGLLLLYGILQGLVSYLNEYNAFAFIKSRGLYFVRNVYLGRAHLDYALLENEEYK KILEDAVEAIETNNNGQEGMFHDFIIFATSLLGLILYALASSGLSILFVLGLLLLVVLQY ALFSIARHYEYSHRPELDGYLIETRYLNQIAYDTAAGKDIRLYQLQDWINDKFEHVNRLI ARIRARDYSAYMLVDTLGILLDFVRDIACYAFLINQLIAGMAIDEFVFYLGIISGFSLWF KKVEESYARMSVNNVLINRMRTALQMKNRMHHGSGVKLDQKEITITLDHVSFSYPNQDRS ILDDISFTLHAGQKLALVGANGAGKSTIVKLILGFYTPSAGSIYINGTNIRELDLDDLYA HITGIFQDAVMLSYSIAENVSMQDITDTDLQRVKDCLKRCGLWNFISALPQQELTHIGKD IEEDGIQLSGGQKQKLFMARALYRDFGCLLLDEPTAALDALAEKALYESYHELTQGTSSL FISHRLSSTRFCDEILVLDQGHIVERGSHEELLGKQGIYAAMFQAQSQYYEEEGDGCECM AGN >gi|312956640|gb|AENW01000009.1| GENE 250 274628 - 275599 1003 323 aa, chain - ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 55 312 188 452 452 87 24.0 5e-17 MQILILLPLLVHLWLLRKQRNRLLWEGAASLIVFSALLYTGDRRLYAAFLLLIFILDTDG EYILHIIVPVFILLTWPLSYAPFVWTLMELVLVLYDKLMIRSYEQQLQEYQNKVFDRQVQ EVEHMYTTMRAWRHDYHNHLQNLKAKLRKAEVEESLGYLNELEQELDDIRQLVETGNANM DAILNSKLSLALAQGIDIHVKASVPESIPFQDTDMCALLGNLTDNAVEACAKVKEQPFLR LYIGLYKGQLYISCTNATSEVVRKLDADYVTRKRGNHGHGLKRMDLIVEKYDGFIQRKNE PGVFTTEIMLPLQESEILGRKML >gi|312956640|gb|AENW01000009.1| GENE 251 275587 - 276276 757 229 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 46 207 50 216 234 85 26.0 6e-17 MRIAIVEDEQDLALELHALLQKLGSHSIALFPGGEQFLFAWEEQPYDLVFLDIQMKGMNG LKIARKVREKDAHAYLVFLTNDPSFVFEGYEVNAVRYWLKPVQEEKLCQLLDQLEAPKAY LLWSIDGELRKLYEEDIYYLESDAHYVRCHHRKGIFRMKGSFQKECAGLSSDFLNCHRSY CVNLNHIHALRKDGCVLDNQECIPVSRGMKQRVQEEIMKRCKRDLLCRF >gi|312956640|gb|AENW01000009.1| GENE 252 276487 - 277044 518 185 aa, chain - ## HITS:1 COG:SA2165 KEGG:ns NR:ns ## COG: SA2165 COG1309 # Protein_GI_number: 15927955 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Staphylococcus aureus N315 # 3 174 2 181 207 63 25.0 3e-10 MKKQPQITEQTKDKLRSAFWTLYSSKPIDKITIKEITDLAGYNRGTFYLYYKDVYDIFAS IETELLQASEQILETARESELSGLKNHMSMIMALARKYSAYVSVLLRDPSSNQFSRKLRE MIWPILRPYVIQHPCTKQEESILEEFYLCGLLAAISSWVKEEEPLPIDQFISFVLSNVLP FSKEA >gi|312956640|gb|AENW01000009.1| GENE 253 277598 - 278311 280 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 5 224 1 222 223 112 31 2e-23 MEDFMSAYITFDNIAKHYHRADVITRALDGASFCVEQGELAVILGPSGAGKTTALNILGG MDTATSGQLLVDGRDITACNRRQLVEYRRYDIGFVFQFYNLVPNLTALENIELANQMKKD SMDAGEILKLVGLSHRSSNFPGQLSGGEQQRVAIARAIAKKPKLLLCDEPTGALDDQSGR MVLELLQKLSRQEGMTVLIITHNAAIAQMADRIIRFKNGTVSEMVRNTPLPISEIAW >gi|312956640|gb|AENW01000009.1| GENE 254 278316 - 280796 2502 826 aa, chain + ## HITS:1 COG:L111162 KEGG:ns NR:ns ## COG: L111162 COG0577 # Protein_GI_number: 15673086 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 2 826 7 896 896 392 28.0 1e-108 MKASNKDIRRTIFRNKKRFCSILIITALGVMMLSGLKAACDDLRYSADQFYDEQQVFDIQ VVSTMGLNEDDLAALRKANGIERAEGVYRETVYTSVNGSSQNMDVQTLGGQLNTPYLLKG RLPENEKEIAVSKTYADDSEKTIGDTIQFHEPSQIRSTYTISAIVQDPSDLNNKDGAASF RSISASRYVCFIREDGISFPAYTAAYVQVKGSRDMASYSQEYEALIKRAKKTLEQDVKQQ QEDRRYDELVEQMKLAAYAVDPQAAAHVDTSSIQHPKWYIQDRSSLSSYSNIESDAASIE AVGTAFPIVFFTVAILIALTTITRMVEEERLLIGTYKALGFRNIEIMKKYLLYAGSACLL GGIIGDIGGFLLLPKFVFRIFQTLYLIPNYSLQFDAWYGIGGIALFTGGILVAVWIAVHE ELKHMPVVLMRPKAPRTGARVLLERIRPLWRNLTFLNKVTARNLFRYKKRMLMTVFGIMG CSALVLCAMAINDSVSALIPRQYEHIYRYDLMVMTDEAHVYQSLSKNDEVSECMALLVDN ATIKSSGNKEERVQLMVFSKQADVASYLSLEDLNGDPVTLEEGDVYVTQNASQVLDFSVK DTIRVQNSDLKEERVKVTGIVQNYLGNTIYMSENTYEKLFGSYEDNAVLANYKGKVSELQ KDRYVQKLEERDDVLSVVSTSSMQNAFETSFSLITSVVYLILAMAAALAFVVLFTLSTTN ISERVRELATIKVLGFYDKEVHSYVNKETLLLTLLGILVGLPAGTILAQSLTYVLNMPSI HFAVTIRPISYLYTVLLSFGFAVVVNLITNRVLNHIDMVESLKSME >gi|312956640|gb|AENW01000009.1| GENE 255 281435 - 281824 194 129 aa, chain - ## HITS:1 COG:SP1786 KEGG:ns NR:ns ## COG: SP1786 COG1598 # Protein_GI_number: 15901615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 126 1 146 150 63 28.0 1e-10 MKVMYPALFEKEDSRYNVTFPDLPEAITCGDTLEQAIEMAKECLGLCLDVRKENKEEIPV MSDPSRINCANGTFVMMIEFDSIDFNKRYNKKAIRKNVTIPAWLNELAEEKNVNFSNVLQ NALMKKLNI >gi|312956640|gb|AENW01000009.1| GENE 256 281882 - 282070 138 62 aa, chain - ## HITS:1 COG:no KEGG:MGAS9429_Spy0565 NR:ns ## KEGG: MGAS9429_Spy0565 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS9429 # Pathway: not_defined # 1 61 28 87 88 67 59.0 1e-10 MPMTSKQMVKLLKQNGFIEIRQAGSHKILNNPVTNRSVVVPIHAKDLPKGTERNILKQAG LL >gi|312956640|gb|AENW01000009.1| GENE 257 283101 - 283853 526 250 aa, chain - ## HITS:1 COG:SP0923 KEGG:ns NR:ns ## COG: SP0923 COG0561 # Protein_GI_number: 15900803 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 109 248 125 269 269 82 32.0 7e-16 MTPRTRDVINQLHAQGIYFGIASGRPLDELAKKAELWGIHYAFDILIGMNGSELWDNLHQ KEYSYFKMKKDWIQETMNLMKPFDSNCFIYRDDCLLCERDDAHMRKSALTSDKRMVVVDA LSVMYEQENAKIMYRVKEADVDEIEQYLKEHPSPYYKGFKTQPTLIEFADQRVSKAYALK KFCEFNKITPEKVVAFGDTTNDNDMLQYSGLGVCMSNGSDDTKAIADDITKCSNDEDGFA QYMEENFLNI >gi|312956640|gb|AENW01000009.1| GENE 258 284165 - 284461 306 98 aa, chain - ## HITS:1 COG:lin0580 KEGG:ns NR:ns ## COG: lin0580 COG3695 # Protein_GI_number: 16799655 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Listeria innocua # 9 97 10 98 98 97 51.0 4e-21 MDEHFIYIVLEIVSEIPKGNVATYKQLAKLAGRERNARQVGKILSASSLYGEYPCHRVVN SAGRTAPNWDEQKDLLIDEGVTFKPNGNVDLKACQWKI >gi|312956640|gb|AENW01000009.1| GENE 259 285226 - 286314 737 362 aa, chain - ## HITS:1 COG:SP0575 KEGG:ns NR:ns ## COG: SP0575 COG1061 # Protein_GI_number: 15900485 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Streptococcus pneumoniae TIGR4 # 23 342 231 544 548 139 28.0 9e-33 MHMFCGPIRYETSSFQIQNTYRFQQLLIPRMTTMRCLDDSKTYTQYCSDLMNDQIRNYLI VKDVVKEFQNDGKIIILSERRQHLTILYEMLKHLHIHVYVLTGERKTKERNEIIAKVRNF NSKEKFILLATSKLLGEGFDLPALSTLFLVMPISDESRIEQYTGRIHKNVEGKDMVKVYD YVDAHIPMLEGMFHKRLKQYQKEGYFLQEQNQIVEVSQLMYEGQSYKHVFLEDIKASSSE ILIMNAHYELGKIKSYFDVLQEKAHQNVQLYVVLNDEQRQKEMLVRTIEGMGAAILYSNH SAHFVVIDKEIIWYSDMDFLGRAKKDGLSTRLKDPHLVNEIMKIAQDEQLQNIENDKKIS LW >gi|312956640|gb|AENW01000009.1| GENE 260 286283 - 287590 738 435 aa, chain - ## HITS:1 COG:SP0575 KEGG:ns NR:ns ## COG: SP0575 COG1061 # Protein_GI_number: 15900485 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Streptococcus pneumoniae TIGR4 # 225 411 4 197 548 124 34.0 3e-28 MDFDEDNWFDDMLSVYKIALRYDIYPLMERSSSGHGGHLWLFFEIPVKALKARKLGSLLI QEAMEGNKNLNFDSFDRMFPNQDYLPQGGFGNLIALPLRHDAYLKGNSSFINDLQQVIDH PIEYLASLPKLQGQQLDQILNSYYKNDYFFDQQQMGLSLDTNTKYSKQMYGLENTMLCIE KKELNLYTLSVLKRLGSMYNPEYFLKQKLKKPIYRETTPRVLSYYEEDDRYLYLPRGQKY KLQEIFPEAEIQLEAQVTKGQVIDIAFTGELRQNQQEAVNTLMQYDMGIMKAVPGFGKTV MALYMIAQRTVSTLVIVPNKEIQKQWEQRIHEFLTIPPGKSKRDSYIGIYNGSKKKLRGH LDIAVAASLANLEDIAVTLKEYGMIIVDECHHAASDTFSRVLRNVNARYIWLFGNSQKKR RVGENHAYVLRSYPL >gi|312956640|gb|AENW01000009.1| GENE 261 287734 - 287991 171 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYEERIQHLEQENAFLKAELRKRGYFYLSANEKLSTIDKIEIYLSYFRGRPDVYAERYF SKKHQKFGWNPACDRSFQAGCKKGK >gi|312956640|gb|AENW01000009.1| GENE 262 288164 - 289636 751 490 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEYLDKVKAQLKKMSLEEKDAWILTQAKLISNYKQNDFLMSLSGTKKIINMPTLDDIDTL CTRIETGDIYLEYITHYHEFDEDGSYMDDWVVWYNDPFSILPMMRRIFAGCHQLVMLEEY QTVYDLLSRIFELKLFIQEGENSEDAPEEEYIELSDSKIKEELSYNLDKAAADWIISFMY LTTKLSDKDRAEKLIKMLETSISKNLKLRILKDLGGTEKLFVSMQSALEIAIADLETQKK EILKAGNRNRKFFEIEDKLTRSNELLIDIRMRCLERKKIKQMESFLEDSWNDVCEVVEWL SFEKDIDDQPEIDTVLEICKELVQSDEIQYDEWQLRKKVLTDIVEHDYYDNLGASDIMEE LAEKLCTNDEEYLAYADILYINENKEKAALLYNQHGREDKYITYLENHLGSEQKNYNALI TYYNQHNQKDDAIRVAQLGLKNCKDDLTDIFIFLLLHTRENDATWFKKLFASAKRRKNVD MIKIDIAMQR >gi|312956640|gb|AENW01000009.1| GENE 263 290056 - 290877 357 273 aa, chain + ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 1 102 21 124 135 86 44.0 5e-17 MFRIGEFSKLMQVSVRMLRYYDEVGLLNPAQSDPWTGYRMYSVEQIPVLNRILYLRDCGF TVAEMEGLVLGNDDRMMEALKNKEKEIALAIKAEEQKLHRIDHAKQDLLQGTADLHFNVT IKSIPSCFVVSIRELIPDYYAEEMLWEKLSDFARQHRVDCSPTTFSIYHDEDYREANVDV ELCLPVKKAIRDCDGFQCREVEEEPLTASLMVYGDFSNISAAYQSFAKWLETNRQYEMKG ANRQMIHRGPWNEKDAGSYLTELQIPLRMLNKY >gi|312956640|gb|AENW01000009.1| GENE 264 290950 - 291429 465 159 aa, chain + ## HITS:1 COG:MK0151 KEGG:ns NR:ns ## COG: MK0151 COG1720 # Protein_GI_number: 20093591 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanopyrus kandleri AV19 # 21 137 42 155 173 92 39.0 4e-19 MTKFEVHSVGSIHSGKEGGTIIQVDENYIPALQALDGFSHLQIIWWFDGYDEDVYRTILK TKQPYKKAPEEMGIFATRSPIRPNPIALTAVEKLHIDYEKGVVQIAYIDANDGSPVLDIK PYTPSLDRIEAPEVPAWCAHWPKSLEASGSFAWEKEFNF >gi|312956640|gb|AENW01000009.1| GENE 265 291975 - 296195 940 1406 aa, chain - ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 277 1149 252 1032 1050 253 28.0 2e-66 MDNRHIREEILKYWHVIEFLNQNEFPTIKNKKSIYVSTIGYLMSEQIDIFHKVKQDNFKI KELPETSDKIELCLGKILRDDCVKAIYQLANVSDERNEITRGSIAIMGLQVSTMNHYVPG SFNLSPIVWTIYRMWSQHNSDLTVLINEADYEKDMAEIDSWLLKQETVDMVIIRECYDKV ISQFINLALLQPEYTGLFVYQRFKDEKMKERYEETLGYANLHMNFYSKDLSFAMRLNKKD FIHKTEYGKVFIEPYITSALSDEAKDPRIDLLNRSIENKEMLQRVLHIDHAPLGKWPSRY APAFMQQFAINLAISNNSEFPPFLSVNGPPGTGKTTMLKEVIADAIVKKAMVMSNFPESN DAFTECNFEEGNCINHGYSKFFSHYYKVDRRINQISILVASCNNAAVENITKELPDGEAI CNGVKNINDEDENEIKLRQIRHYFDKQDEDIYFTEYANRLFNKSDGDKKIAPHYYWGLIS VPLGNRKNQGNFTQILNDFTFEMLGKNDYIEEHKSKYTKAVELFQKQLRVVEQIKIKLKT VCDTERHYQNELANIKEKIKENENILSIQKQQIDTLKTNRKQELCMKKEMLSYLNAEEKE ASSKAQLVLDKKQVVSELKDRETVCRDEIMRLESSRSLKETFMAIFRVKTLKSKEISDLY IKLKTIESDITYATSVWEDAEAECHKQRDKCSEMDLLIESQGIKIKSISDEIKKTEKAID QLNKDIEHENKRLQEIENNLLKWQEKQFRSDQNFDSVTIMNDHFFQQFYAHNSKDVHLLN PWVSERYHREREKLFYYALQVNKEFVLSSTYMRSNLKNLLMMWKGTDGNETIKFKENDKI NAFSSLYQTISILVPVISTTFASVGRFLEYVQKPYELGTLIIDEAGQAQPHFALGAMLRC KKVLVVGDPKHVEPVVTDDLDAIKQLLKNEYTTPYSDKHISVQQFSDKLNPFGTYLNDSS GEKLWVGCPLVVHRRCINPMFDISNRISYDGVMIQQTKEPDQNTVDTFAIPISKWLQCSG KEKNHLRKDHYVPEQGKETLHIIKLAFEKAKGDKPDLYVISPFTSVVEGLKKEIRESDFY KLNKEYYNEWMESNIGTVHTFQGKEANEVVLLLGCDQDAKGAVTWVNANIINVAVTRAKY RLCIIGDYKIWKQNQVLKITKGVIDAYTLQYLNQLKEADQTDQNKELITLLMKQLPSSSD YINEKGDGEEDIIDTYILMKELKKIKFARDFLTEQEKKIYHLTDEDLNELSYPVKSHLMT GIKIQSIYEAYAENFNIVFEDDSFKNIMFCKATELYMRESFKIAFDYIDDRKTSKPRTLG NMENMIKININRFIKLTQSEYYNRNWWNDFICKLSNIRELRNDCCHGTSFKHNQEQKLRK LLFDDEVFKNLKVGKKIAENMKKSIK >gi|312956640|gb|AENW01000009.1| GENE 266 296498 - 296785 202 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169350762|ref|ZP_02867700.1| ## NR: gi|169350762|ref|ZP_02867700.1| hypothetical protein CLOSPI_01535 [Clostridium spiroforme DSM 1552] # 1 93 249 341 343 108 62.0 8e-23 MKNNGVQFSINEDTIYKVKLTEHGKELFKLRYLERPNPLPESEEDKSIYYFNCSKMQFKS YFAPFRKDVIVLEPRDMIEEILQEYMDAIDIYKGD >gi|312956640|gb|AENW01000009.1| GENE 267 297180 - 297443 105 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSITKYIRDQELFKTGLNISELIRKIIINYHSKYKDDINELKNKIKDAVKNETRNQQFNE DEYLNIAWKITKYLCQNQIVIDDEKKD >gi|312956640|gb|AENW01000009.1| GENE 268 297778 - 297993 169 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIHCDTTDQYFLCRWILVNFEESAVRLELIAANQVRVYTSDGYMDIFMNLTGMVVFECHL YNDPYTLKKEA >gi|312956640|gb|AENW01000009.1| GENE 269 298360 - 299451 202 363 aa, chain - ## HITS:1 COG:no KEGG:DSY0720 NR:ns ## KEGG: DSY0720 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 133 362 1 229 230 192 44.0 1e-47 MIFCENCFQDAEVISIIRRQNFKGKCPICGKNNVYLYDTNNNYDLVSLFDDLISIFTPVS LLPTEYPKSEIKLLKTELKENWHIFGDIGESNIYKILIGICSDRYENNPELFDYPIGIAE LYRNEKFESNLLLKSNTWEEFTESLKTTNRFHSHYINLELLKKFCTFIRKPYKTGELFYR CRIGDSDGFDIYSMSAPDSSKTVNGRANSKGIRCLYLADDIETTIHETRAGEYDYVTIGT FRLKKNIIVVDLKRINRISPFIEGLDAKEYALNKETLNKINFELGKTLRRSDSDLDYLPT QYISDFIKSIKHNNVNEYSGIEYNSVMYEKGYNLAIFDPELFECINTEVYRIENVTYHIH QIR >gi|312956640|gb|AENW01000009.1| GENE 270 299448 - 300377 291 309 aa, chain - ## HITS:1 COG:no KEGG:SAOUHSC_00164 NR:ns ## KEGG: SAOUHSC_00164 # Name: not_defined # Def: hypothetical protein # Organism: S.aureus_NCTC8325 # Pathway: not_defined # 1 305 1 301 307 227 43.0 5e-58 MYFPYLRGRQFELIAIREMIEKNLINDKVIPIIEPVKASSTFLKTIEVSKEHDKALAIIV NPKVGNFIKEISNLKNEKIKEKYYDLLDFSDRIIHTRIIDMKFQETIEFINANYNSKMAI CLNNDDIAIFEKYFKGNDFLYNIIPDKTEFRRRIRENRVMIEDHFIKSERNVDYLDKDDF FSRDHLYYKEDGYLGFSDYSIIGNEYSETGFAPYAVAIHIIYFDEEKSLRVRHFVSDSND DISDIAGKFKEAMYKLVKWNKTAKLDTYGIRKLEEFYSLESYPGLGTVKKLSIMHHLELM NSFLDGVEI >gi|312956640|gb|AENW01000009.1| GENE 271 300378 - 301238 276 286 aa, chain - ## HITS:1 COG:no KEGG:DSY0719 NR:ns ## KEGG: DSY0719 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 8 284 7 283 284 231 47.0 3e-59 MEYGKTNILNKVFTKNTLNKWISLEKSDIYAITIKRFVKDAEGKTNKELISDIYTKMKTD YRNEYYYKNTLLNKLLIGKHSVNTTSALTEVNINKSKADFVLINGKAVVYEIKTELDNLD RLECQIMDYYKAFNHVAVLTYEKNLKNVENIINNLNLPVGLYVLRRTGKIGTVFDPKPYM DALDFNVMFKILRKSEYEQLVLNFFGNLPVTTQFKYYSECKEMLSSIDLALFYNSFTKIL KNRCIIEKEVLDRVPYELRFLVYFNKMKEESYKNLFNFLKEERGEG >gi|312956640|gb|AENW01000009.1| GENE 272 301270 - 301488 190 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167760896|ref|ZP_02433023.1| ## NR: gi|167760896|ref|ZP_02433023.1| hypothetical protein CLOSCI_03284 [Clostridium scindens ATCC 35704] # 1 62 1 62 66 72 53.0 1e-11 MISYKPFFETLKKKGITQYKLETEYGVSKGTVDNLRHNRSITLYTVDELCKILECEPWDI FEINNYESFEER >gi|312956640|gb|AENW01000009.1| GENE 273 302122 - 303663 1524 513 aa, chain - ## HITS:1 COG:BH0607_2 KEGG:ns NR:ns ## COG: BH0607_2 COG0519 # Protein_GI_number: 15613170 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Bacillus halodurans # 196 513 1 315 315 520 78.0 1e-147 MADKIIVLDFGSQYNQLIARRIREFGVYSELHPHTMTLEEILALKDVRGIIFSGGPNSVY DEEAFKCDSAIFESGIPILGICYGMQMTHFMNGGSVKACEAKEYGRTEITVETDSPIFKG LPEKQIVWMSHGDQVDTLADGFVKDAYSDTCTFAATSNIEKNIYTLQFHPEVRHSEYGNE ILKNFVFEVCKAKNDWSMHSFIDMEIEKIRKTVGTDKVLLGLSGGVDSSVVAALLHKAIG DQLICMFIDHGLLRKGEAESVMETFGREMNINLVKIDAKERFLSKLAGVSDPEKKRKIIG NEFVYTFDEEVKKLTSGEDIKWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMQFKL IEPLNTLFKDEVRALGTELGLPDEMVWRQPFPGPGLGIRVLGDITEEKLEIVRDSDLILR EEVAKAGLQKEIWQYFTCLTNMRSVGVMGDQRTYDYAVAIRAVTSIDGMTADWAKIPYEV LDVISNRIVNEVKHVNRVVYDITSKPPGTIEFE >gi|312956640|gb|AENW01000009.1| GENE 274 303786 - 305099 1349 437 aa, chain - ## HITS:1 COG:FN1250 KEGG:ns NR:ns ## COG: FN1250 COG2252 # Protein_GI_number: 19704585 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 5 433 15 447 448 334 51.0 2e-91 MNVKQTSVKTEVIAGITTFLAMAYILGVNPSILHDAGMDRASVFMATAISAGFASIVMGL VANYPVALAAGMGVNALFAYTICGQMGMSWQAALAGVFISGLIFIVISVTGIRKAIINAI PKQLKMAIGAGIGFFIAFVGLKNAGIVAGSASTFVTIGNFADPQVLLALFGILLTIALLV KKVPAAVFVGMVITAVIGIVCGAAFGLKGMPALPDTFFEMNFHLNAAGSFMDGFGELFAN PLNAFVVIFSFLFVDFFDTAGTLVAVANRIGLVNEKGELENVERALVADAVGTVAGAALG TSTVTSFVESTSGVEVGGRTGLTACTTGILFFVSILFSPIVLSAVTNAVTAPALVVVGIL MAQQLKEIEWDNMVYATAGFITVLMMILTYSISNGIAFGFIAYAIAMTAAGKTKEVHITV WVLMVIFLIYFALPQFM >gi|312956640|gb|AENW01000009.1| GENE 275 305340 - 305942 591 200 aa, chain - ## HITS:1 COG:BH0697 KEGG:ns NR:ns ## COG: BH0697 COG3340 # Protein_GI_number: 15613260 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Bacillus halodurans # 1 169 1 170 232 109 34.0 3e-24 MKTLIAIGGGSFQKQETMSIDTYAISRCEKKQPHVLFIPLASRDDQGYAKRFKQYYRSLG CQVEALRLLHTKLSNEEIYKKFRSQDMIYLGAGDTVFLMKQLKQRKLDLLLKELSQRGIV ICGISAGANALFEYGYSNIASDTFELVNGMGMIEGAFCPHYQKEERKSFDMVCRKQNLPA IGCADQCAYVVTDEKRFFLE >gi|312956640|gb|AENW01000009.1| GENE 276 305939 - 307108 921 389 aa, chain - ## HITS:1 COG:alr2765 KEGG:ns NR:ns ## COG: alr2765 COG0436 # Protein_GI_number: 17230257 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Nostoc sp. PCC 7120 # 4 384 9 389 403 342 43.0 6e-94 MKFSKRMDLLAEGVFSRLDEEKQNMLASGKAVYDFTIGSPNIAPSKEVMDALITAAQQPE SYMYSLHDTKELKETIQAWYRKRYQVELDTETEILSLQGSQEGLAHVALALCDEGDIVLI PAPSYPIFANGPKIAGAELYEMPMLKEYDYLIQFDAIPEEIAEKAKMMIISYPNNPTGAT APDSFYEELIQFAKAHDIIVIHDTAYSNLVFDGEEGKSFLYYAGAKDIGIEFNSFSKTYG MAGARIGICVGNAEIVGILRKLKSNIDYGMFLPIQKAAIAALTQDQSIVKETRETYQRRR NRIVAGAAAAGWHIASCKSTMFLWAQIPEGYGSSEEFALNLLKCSGMLVTPGSSFGAYGE GFVRIALVQSDEVIEQALQALKESRFFLK Prediction of potential genes in microbial genomes Time: Sat May 14 01:56:50 2011 Seq name: gi|312956637|gb|AENW01000010.1| Clostridium sp. HGF2 contig00033, whole genome shotgun sequence Length of sequence - 1014 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 543 366 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 2 1 Op 2 . + CDS 552 - 1014 493 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation Predicted protein(s) >gi|312956637|gb|AENW01000010.1| GENE 1 1 - 543 366 180 aa, chain + ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 3 179 127 304 524 137 40.0 1e-32 HGWNKPTGREIYGKKLGIIGFGMIGKYLAEYAYGCGMEVYAYDAFAIAEETARQYHAQIS TLEDILTDCDYISLHVPLLESTRNMISTEEFKKMKKDACLLNAARGGIVNEEALYEALKK KEIRSACFDVYSSEPPREDDKLLTLDNFLLTPHTAARSMESEQRTCAMSTDIILEQLIGN >gi|312956637|gb|AENW01000010.1| GENE 2 552 - 1014 493 154 aa, chain + ## HITS:1 COG:RSc0413_1 KEGG:ns NR:ns ## COG: RSc0413_1 COG0794 # Protein_GI_number: 17545132 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Ralstonia solanacearum # 43 153 54 164 216 98 47.0 4e-21 MIECVKEYLSNIASELGKNIEDMDMESIERAAHIIMESEKQGGRIHVTGIGKPGHVAGYI ASLLSSTGTSAYELHGTEAVHGSSGQVKKGDVVIAISNSGETMELEATVQTLIANGAHII SCTGNPQSTLAKQSEVCLVAHVDEEGDALNKPPR Prediction of potential genes in microbial genomes Time: Sat May 14 01:57:40 2011 Seq name: gi|312956450|gb|AENW01000011.1| Clostridium sp. HGF2 contig00017, whole genome shotgun sequence Length of sequence - 178179 bp Number of predicted genes - 166, with homology - 150 Number of transcription units - 91, operones - 38 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 682 - 741 4.0 1 1 Tu 1 . + CDS 776 - 2176 979 ## COG0069 Glutamate synthase domain 2 + Term 2222 - 2273 6.2 - Term 2210 - 2260 7.6 2 2 Tu 1 . - CDS 2275 - 4272 1940 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 3 3 Tu 1 . - CDS 5121 - 5915 473 ## Cphy_2209 hypothetical protein - Prom 5959 - 6018 3.4 4 4 Tu 1 . - CDS 6576 - 8894 2046 ## COG2200 FOG: EAL domain - Prom 9087 - 9146 4.2 - Term 8944 - 8984 1.8 5 5 Tu 1 . - CDS 9148 - 9921 446 ## Cthe_2036 amidohydrolase 2 - Prom 9987 - 10046 3.6 - Term 9995 - 10052 8.3 6 6 Op 1 . - CDS 10077 - 11393 1455 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 7 6 Op 2 . - CDS 11415 - 12233 820 ## gi|160915379|ref|ZP_02077591.1| hypothetical protein EUBDOL_01387 8 6 Op 3 . - CDS 12287 - 12772 743 ## gi|293401175|ref|ZP_06645319.1| conserved hypothetical protein - Prom 12922 - 12981 4.0 - Term 12925 - 12975 -0.8 9 7 Op 1 . - CDS 12988 - 13377 517 ## DSY1548 hypothetical protein 10 7 Op 2 . - CDS 13392 - 14417 1050 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases - Prom 14465 - 14524 10.2 - Term 14628 - 14687 8.3 11 8 Tu 1 . - CDS 14748 - 15185 492 ## gi|293401178|ref|ZP_06645322.1| hypothetical protein HMPREF0863_01462 - Prom 15210 - 15269 6.3 - Term 15335 - 15392 4.2 12 9 Op 1 1/0.056 - CDS 15409 - 17988 3141 ## COG2217 Cation transport ATPase - Prom 18008 - 18067 2.0 13 9 Op 2 2/0.000 - CDS 18070 - 18696 551 ## COG0500 SAM-dependent methyltransferases 14 9 Op 3 . - CDS 18737 - 19096 458 ## COG0640 Predicted transcriptional regulators - Prom 19135 - 19194 8.6 15 10 Op 1 . - CDS 19359 - 20513 1378 ## COG1929 Glycerate kinase 16 10 Op 2 . - CDS 20514 - 21860 785 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 21881 - 21940 6.5 + Prom 21830 - 21889 7.2 17 11 Tu 1 . + CDS 21973 - 22506 717 ## COG0693 Putative intracellular protease/amidase + Term 22554 - 22590 -0.8 18 12 Tu 1 . - CDS 22682 - 23590 851 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 23639 - 23698 5.9 + Prom 23642 - 23701 6.6 19 13 Op 1 . + CDS 23816 - 24760 1135 ## COG0598 Mg2+ and Co2+ transporters 20 13 Op 2 . + CDS 24835 - 24945 125 ## + Term 25194 - 25229 4.1 - Term 25563 - 25590 -0.8 21 14 Tu 1 . - CDS 25597 - 26217 750 ## gi|293401194|ref|ZP_06645338.1| conserved hypothetical protein - Prom 26239 - 26298 3.6 22 15 Tu 1 . - CDS 26361 - 27398 860 ## COG2855 Predicted membrane protein - Prom 27486 - 27545 6.3 23 16 Tu 1 . - CDS 27608 - 28459 831 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 28594 - 28620 -1.0 24 17 Op 1 4/0.000 - CDS 28621 - 28944 526 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 25 17 Op 2 24/0.000 - CDS 28941 - 29267 303 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 26 17 Op 3 23/0.000 - CDS 29264 - 30025 994 ## COG0107 Imidazoleglycerol-phosphate synthase 27 17 Op 4 25/0.000 - CDS 30025 - 30744 881 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 28 17 Op 5 18/0.000 - CDS 30741 - 31364 779 ## COG0118 Glutamine amidotransferase 29 17 Op 6 13/0.000 - CDS 31366 - 31977 771 ## COG0131 Imidazoleglycerol-phosphate dehydratase 30 17 Op 7 19/0.000 - CDS 31974 - 33008 1215 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 31 17 Op 8 18/0.000 - CDS 33005 - 34288 1583 ## COG0141 Histidinol dehydrogenase 32 17 Op 9 11/0.000 - CDS 34282 - 34914 857 ## COG0040 ATP phosphoribosyltransferase 33 17 Op 10 . - CDS 34911 - 36035 1470 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis - Term 36680 - 36728 9.1 34 18 Tu 1 . - CDS 36760 - 36921 304 ## - Prom 37017 - 37076 9.4 - Term 36987 - 37035 3.1 35 19 Tu 1 . - CDS 37126 - 37482 345 ## gi|293401206|ref|ZP_06645350.1| putative toxin-antitoxin system, antitoxin component, Xre family - Prom 37519 - 37578 7.2 + Prom 37589 - 37648 9.1 36 20 Tu 1 . + CDS 37680 - 38408 924 ## COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain + Term 38615 - 38652 2.5 - Term 38443 - 38508 8.0 37 21 Op 1 . - CDS 38757 - 40082 1431 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 38 21 Op 2 . - CDS 40101 - 40916 900 ## COG0005 Purine nucleoside phosphorylase - Prom 40941 - 41000 4.5 - Term 40990 - 41036 1.2 39 22 Tu 1 . - CDS 41206 - 41805 681 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 41887 - 41946 5.0 + Prom 42229 - 42288 5.9 40 23 Op 1 2/0.000 + CDS 42352 - 44256 2429 ## COG1960 Acyl-CoA dehydrogenases 41 23 Op 2 . + CDS 44279 - 45484 1422 ## COG0426 Uncharacterized flavoproteins + Term 45490 - 45525 4.4 42 24 Tu 1 . - CDS 45848 - 46975 961 ## - Term 47563 - 47592 2.1 43 25 Tu 1 . - CDS 47599 - 49770 2618 ## Cphy_3030 hypothetical protein + Prom 49955 - 50014 9.6 44 26 Tu 1 . + CDS 50034 - 50897 944 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 51033 - 51079 1.0 45 27 Op 1 6/0.000 - CDS 51538 - 52692 1321 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 46 27 Op 2 3/0.000 - CDS 52764 - 54266 1331 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 47 27 Op 3 . - CDS 54332 - 55042 851 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 55198 - 55257 3.6 + Prom 54990 - 55049 3.5 48 28 Tu 1 . + CDS 55178 - 56704 1659 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 49 29 Tu 1 . + CDS 56818 - 57276 330 ## LCABL_25030 ABC-2 - Term 57406 - 57441 -1.0 50 30 Op 1 . - CDS 57555 - 57725 166 ## gi|169334544|ref|ZP_02861737.1| hypothetical protein ANASTE_00947 51 30 Op 2 . - CDS 57781 - 58209 358 ## CDR20291_0527 hypothetical protein - Prom 58248 - 58307 3.3 - Term 58448 - 58477 0.5 52 31 Op 1 . - CDS 58505 - 58681 87 ## gi|224541131|ref|ZP_03681670.1| hypothetical protein CATMIT_00282 - Prom 58702 - 58761 3.8 53 31 Op 2 . - CDS 58765 - 59334 127 ## COG0655 Multimeric flavodoxin WrbA 54 31 Op 3 . - CDS 59427 - 59774 185 ## gi|154499769|ref|ZP_02037807.1| hypothetical protein BACCAP_03426 - Prom 59894 - 59953 3.5 55 32 Tu 1 . - CDS 59968 - 61800 878 ## Sputw3181_0345 hypothetical protein - Prom 61976 - 62035 4.7 - Term 62016 - 62061 4.1 56 33 Op 1 40/0.000 - CDS 62090 - 64231 2403 ## COG0642 Signal transduction histidine kinase 57 33 Op 2 . - CDS 64246 - 64956 922 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 64977 - 65036 4.0 58 34 Tu 1 . - CDS 65076 - 65726 760 ## COG0398 Uncharacterized conserved protein - Prom 65964 - 66023 5.6 - Term 66074 - 66125 7.4 59 35 Op 1 . - CDS 66277 - 67053 864 ## EUBREC_3191 hypothetical protein 60 35 Op 2 . - CDS 67099 - 69411 1945 ## COG0826 Collagenase and related proteases 61 35 Op 3 12/0.000 - CDS 69398 - 69856 497 ## COG3610 Uncharacterized conserved protein 62 35 Op 4 . - CDS 69858 - 70625 924 ## COG2966 Uncharacterized conserved protein - Prom 70645 - 70704 5.5 + Prom 70745 - 70804 5.1 63 36 Tu 1 . + CDS 70824 - 71315 622 ## COG2077 Peroxiredoxin + Term 71402 - 71455 11.2 + Prom 71800 - 71859 6.8 64 37 Tu 1 . + CDS 71881 - 72378 602 ## COG2131 Deoxycytidylate deaminase + Prom 72380 - 72439 3.6 65 38 Tu 1 . + CDS 72479 - 73342 1006 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Term 73306 - 73348 5.0 66 39 Op 1 . - CDS 73354 - 73500 189 ## 67 39 Op 2 . - CDS 73502 - 74158 716 ## COG0546 Predicted phosphatases 68 39 Op 3 . - CDS 74151 - 74846 484 ## COG1011 Predicted hydrolase (HAD superfamily) 69 39 Op 4 . - CDS 74857 - 76185 1293 ## COG0534 Na+-driven multidrug efflux pump - Prom 76215 - 76274 4.6 + Prom 76171 - 76230 5.0 70 40 Tu 1 . + CDS 76325 - 76711 336 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 76751 - 76793 4.3 71 41 Tu 1 . - CDS 76866 - 78146 1228 ## COG2200 FOG: EAL domain - Prom 78172 - 78231 5.1 - Term 78456 - 78493 1.7 72 42 Tu 1 . - CDS 78723 - 79778 815 ## COG0392 Predicted integral membrane protein - Prom 79802 - 79861 5.1 + Prom 80225 - 80284 3.1 73 43 Tu 1 . + CDS 80325 - 81566 1039 ## gi|160914961|ref|ZP_02077175.1| hypothetical protein EUBDOL_00969 + Prom 81596 - 81655 4.0 74 44 Tu 1 . + CDS 81767 - 82534 819 ## COG0500 SAM-dependent methyltransferases + Prom 82780 - 82839 7.9 75 45 Tu 1 . + CDS 83077 - 83943 678 ## COG0500 SAM-dependent methyltransferases + Term 84002 - 84034 1.0 + TRNA 84577 - 84650 58.7 # Trp CCA 0 0 + Prom 84578 - 84637 80.1 76 46 Tu 1 . + CDS 84765 - 85586 750 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 85587 - 85633 8.2 77 47 Tu 1 . - CDS 85998 - 86471 372 ## COG0394 Protein-tyrosine-phosphatase - Prom 86511 - 86570 1.8 78 48 Op 1 . - CDS 86918 - 87226 380 ## Cbei_3588 hypothetical protein 79 48 Op 2 . - CDS 87274 - 87588 153 ## 80 48 Op 3 . - CDS 87658 - 89274 1411 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 89356 - 89415 8.2 + Prom 89923 - 89982 3.9 81 49 Tu 1 . + CDS 90060 - 93293 3445 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family + Prom 93760 - 93819 5.3 82 50 Op 1 . + CDS 93899 - 95392 1441 ## ACL_1034 hypothetical protein 83 50 Op 2 . + CDS 95417 - 95932 548 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 84 50 Op 3 . + CDS 95942 - 96964 1070 ## COG1363 Cellulase M and related proteins + Term 96975 - 97028 11.2 + Prom 96973 - 97032 3.0 85 51 Tu 1 . + CDS 97075 - 97728 782 ## COG2119 Predicted membrane protein + Term 97855 - 97904 1.5 + Prom 97864 - 97923 4.6 86 52 Tu 1 . + CDS 97955 - 99706 2208 ## COG1164 Oligoendopeptidase F + Term 99789 - 99840 -0.5 - Term 99885 - 99933 4.9 87 53 Op 1 7/0.000 - CDS 100055 - 101569 1547 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 88 53 Op 2 1/0.056 - CDS 101562 - 103037 1592 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 89 53 Op 3 2/0.000 - CDS 103027 - 104019 948 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 104055 - 104114 8.9 - Term 104153 - 104187 -0.6 90 53 Op 4 . - CDS 104308 - 105876 1553 ## COG2199 FOG: GGDEF domain - Prom 105897 - 105956 4.8 - Term 106043 - 106084 8.0 91 54 Tu 1 . - CDS 106097 - 107797 1948 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) - Prom 107885 - 107944 5.6 - Term 108046 - 108101 6.7 92 55 Op 1 . - CDS 108114 - 108308 208 ## 93 55 Op 2 44/0.000 - CDS 108308 - 109291 899 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 94 55 Op 3 44/0.000 - CDS 109295 - 110293 635 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 95 55 Op 4 49/0.000 - CDS 110306 - 111220 1108 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 96 55 Op 5 38/0.000 - CDS 111232 - 112212 810 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 112237 - 112296 4.5 - Term 112255 - 112301 7.3 97 55 Op 6 . - CDS 112327 - 114027 1619 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 114221 - 114280 6.2 - Term 114263 - 114294 1.5 98 56 Op 1 . - CDS 114322 - 115527 1174 ## COG0205 6-phosphofructokinase 99 56 Op 2 . - CDS 115600 - 115950 565 ## 100 56 Op 3 . - CDS 116011 - 117429 1785 ## CLH_2311 stage V sporulation protein AF - Prom 117461 - 117520 3.0 101 57 Tu 1 . - CDS 117563 - 118480 743 ## COG0206 Cell division GTPase - Prom 118501 - 118560 4.4 102 58 Op 1 . - CDS 118854 - 119852 1258 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 103 58 Op 2 . - CDS 119869 - 121725 2397 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 104 58 Op 3 . - CDS 121759 - 123051 1532 ## gi|293401324|ref|ZP_06645468.1| conserved hypothetical protein 105 58 Op 4 . - CDS 123069 - 123905 805 ## COG3475 LPS biosynthesis protein + Prom 124187 - 124246 3.6 106 59 Tu 1 . + CDS 124291 - 125235 850 ## WPa_0291 hypothetical protein + Term 125283 - 125330 9.1 + Prom 125311 - 125370 6.7 107 60 Tu 1 . + CDS 125429 - 125608 125 ## + Term 125821 - 125856 -0.7 + Prom 125857 - 125916 7.1 108 61 Tu 1 . + CDS 126081 - 126413 384 ## DSY2751 hypothetical protein + Prom 126733 - 126792 2.4 109 62 Tu 1 . + CDS 126823 - 127146 357 ## DSY2751 hypothetical protein + Term 127166 - 127214 8.6 110 63 Tu 1 . - CDS 127202 - 127789 698 ## COG1247 Sortase and related acyltransferases - Term 127837 - 127868 3.4 111 64 Op 1 . - CDS 127876 - 129258 1868 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 112 64 Op 2 . - CDS 129275 - 129448 79 ## 113 64 Op 3 . - CDS 129503 - 130132 782 ## COG2344 AT-rich DNA-binding protein - Prom 130179 - 130238 3.6 114 65 Op 1 . - CDS 130639 - 131067 438 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 115 65 Op 2 . - CDS 131105 - 131296 270 ## gi|293402399|ref|ZP_06646536.1| hypothetical protein HMPREF0863_02677 116 65 Op 3 . - CDS 131380 - 132102 702 ## COG0527 Aspartokinases - Prom 132222 - 132281 3.0 - Term 132218 - 132280 7.0 117 66 Tu 1 . - CDS 132304 - 132978 827 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase - Prom 133005 - 133064 6.5 118 67 Op 1 . - CDS 133195 - 133764 676 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 119 67 Op 2 . - CDS 133764 - 134822 518 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 - Term 135124 - 135164 3.2 120 68 Tu 1 . - CDS 135269 - 136177 834 ## COG2177 Cell division protein - Prom 136203 - 136262 7.0 121 69 Op 1 1/0.056 - CDS 136454 - 137041 483 ## COG1268 Uncharacterized conserved protein 122 69 Op 2 . - CDS 137038 - 137991 996 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 138011 - 138070 4.5 - Term 138339 - 138380 7.2 123 70 Tu 1 . - CDS 138389 - 139939 1586 ## COG3883 Uncharacterized protein conserved in bacteria - Prom 139990 - 140049 5.5 - Term 140022 - 140074 2.5 124 71 Op 1 . - CDS 140102 - 140998 821 ## COG2207 AraC-type DNA-binding domain-containing proteins 125 71 Op 2 1/0.056 - CDS 141090 - 141869 840 ## COG0390 ABC-type uncharacterized transport system, permease component 126 71 Op 3 . - CDS 141862 - 142497 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 142568 - 142627 6.4 + Prom 142460 - 142519 7.5 127 72 Op 1 . + CDS 142602 - 143477 829 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 143484 - 143543 4.4 128 72 Op 2 . + CDS 143577 - 143723 71 ## + Term 143742 - 143778 2.4 - Term 143934 - 143971 1.1 129 73 Op 1 . - CDS 144005 - 145840 2189 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) - Term 145849 - 145889 1.4 130 73 Op 2 1/0.056 - CDS 145933 - 146757 597 ## COG1180 Pyruvate-formate lyase-activating enzyme 131 73 Op 3 . - CDS 146741 - 148060 1472 ## COG3885 Uncharacterized conserved protein - Prom 148205 - 148264 6.2 - Term 148334 - 148366 3.1 132 74 Op 1 . - CDS 148382 - 149353 1028 ## COG1077 Actin-like ATPase involved in cell morphogenesis 133 74 Op 2 . - CDS 149356 - 149475 90 ## - Prom 149612 - 149671 4.5 - Term 149989 - 150024 2.8 134 75 Op 1 . - CDS 150033 - 151034 880 ## CA_C2564 hypothetical protein 135 75 Op 2 . - CDS 151046 - 151738 541 ## COG0822 NifU homolog involved in Fe-S cluster formation 136 76 Op 1 . - CDS 152142 - 152705 538 ## COG0406 Fructose-2,6-bisphosphatase 137 76 Op 2 . - CDS 152725 - 153513 1085 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 138 76 Op 3 . - CDS 153590 - 153952 384 ## gi|293402366|ref|ZP_06646503.1| hypothetical protein HMPREF0863_02644 - Prom 154088 - 154147 6.7 + Prom 153979 - 154038 6.6 139 77 Tu 1 . + CDS 154253 - 154594 366 ## gi|293400757|ref|ZP_06644902.1| hypothetical protein HMPREF0863_01042 140 78 Op 1 35/0.000 - CDS 154853 - 156634 204 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 141 78 Op 2 . - CDS 156627 - 158357 188 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 158391 - 158450 7.0 + Prom 158345 - 158404 5.7 142 79 Tu 1 . + CDS 158444 - 159259 871 ## COG0789 Predicted transcriptional regulators - Term 159843 - 159897 11.4 143 80 Op 1 1/0.056 - CDS 159993 - 160892 327 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 144 80 Op 2 1/0.056 - CDS 160870 - 161337 541 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 145 80 Op 3 2/0.000 - CDS 161353 - 162012 759 ## COG0637 Predicted phosphatase/phosphohexomutase 146 80 Op 4 1/0.056 - CDS 162069 - 163493 1702 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Prom 163541 - 163600 2.1 147 81 Tu 1 . - CDS 163628 - 164629 1378 ## COG0673 Predicted dehydrogenases and related proteins - Prom 164685 - 164744 6.0 + Prom 164825 - 164884 4.1 148 82 Tu 1 . + CDS 164919 - 166847 2110 ## COG3711 Transcriptional antiterminator + Term 167018 - 167048 1.2 - Term 167251 - 167299 8.3 149 83 Tu 1 . - CDS 167317 - 168279 903 ## gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 - Prom 168428 - 168487 5.8 - Term 168669 - 168705 -0.8 150 84 Op 1 . - CDS 168822 - 169091 244 ## CDR20291_0587 hypothetical protein 151 84 Op 2 . - CDS 169112 - 169669 589 ## COG1695 Predicted transcriptional regulators 152 84 Op 3 . - CDS 169733 - 170236 488 ## gi|293401758|ref|ZP_06645899.1| conserved hypothetical protein 153 84 Op 4 . - CDS 170217 - 170756 462 ## gi|293401758|ref|ZP_06645899.1| conserved hypothetical protein - Prom 170857 - 170916 6.0 + Prom 170738 - 170797 3.0 154 85 Op 1 10/0.000 + CDS 170893 - 171195 481 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 171248 - 171307 3.1 155 85 Op 2 . + CDS 171380 - 171637 303 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 171647 - 171680 2.3 - Term 171503 - 171546 2.2 156 86 Tu 1 . - CDS 171681 - 171824 191 ## - Prom 171852 - 171911 6.7 + Prom 171840 - 171899 4.4 157 87 Tu 1 . + CDS 171943 - 172326 215 ## 158 88 Op 1 . - CDS 172375 - 172677 323 ## EUBELI_20620 hypothetical protein 159 88 Op 2 . - CDS 172670 - 173362 802 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 173406 - 173465 6.4 - Term 173791 - 173835 1.5 160 89 Op 1 4/0.000 - CDS 173857 - 174678 954 ## COG0561 Predicted hydrolases of the HAD superfamily 161 89 Op 2 . - CDS 174671 - 175516 992 ## COG0561 Predicted hydrolases of the HAD superfamily 162 89 Op 3 . - CDS 175494 - 176258 1001 ## Dfer_4887 protein of unknown function DUF1361 - Prom 176408 - 176467 4.6 + Prom 176248 - 176307 4.1 163 90 Op 1 . + CDS 176334 - 176756 489 ## + Prom 176758 - 176817 5.1 164 90 Op 2 . + CDS 176856 - 177134 378 ## lp_1789 hypothetical protein + Term 177146 - 177202 2.1 165 91 Op 1 . - CDS 177268 - 177465 191 ## 166 91 Op 2 . - CDS 177484 - 177948 224 ## - Prom 177969 - 178028 9.2 Predicted protein(s) >gi|312956450|gb|AENW01000011.1| GENE 1 776 - 2176 979 466 aa, chain + ## HITS:1 COG:MK0550 KEGG:ns NR:ns ## COG: MK0550 COG0069 # Protein_GI_number: 20093988 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Methanopyrus kandleri AV19 # 91 463 42 419 429 315 44.0 2e-85 MKYVCEICGYMYDEAVEGTSWVNLDSTWKCPLCIAPKECFKKVASEEDASATSKSNDATS LAIQKNAKKEDTLETSMSLIHEMAIHNASRIEAMRTHKSVPGWDDILLLGGQLAHPPLAD KADVDTTTIIGKNARRPMVLNHAVYVSHMSFGALSKEAKTALAKGTAAVHTAQCSGEGGI LPDEIDHAYKYIFEYVPNKYSVTDENLKRSDAIEIKIGQGSKPGMGGHLPAEKVTEEISA IRGKPLHQDIISPSKFEEIKTKDDLKQLVTSLRERSEGRPIGIKIAAGHIEADLEWIAYA QPDFITIDGRGGATGASPKYLKDNSTVPTVYALARARAYMNQHHMTQELIITGGFRTSGE MIKALAMGADAIAIASAAMIAIGCQQYRICHNGKCPMGIATQDPELRKNFSIDKGAKRLE NYLHVLREELKSFARISGHTCIHDLSREDLCTTSSEISNHTGIPHC >gi|312956450|gb|AENW01000011.1| GENE 2 2275 - 4272 1940 665 aa, chain - ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 3 664 2 660 660 583 46.0 1e-166 MKDTIKLKDFLDFTYLSNLSFALDEEHGVFVGSKCVEKDNSYQMKLYLTDGDTVRQLTSH GKEQLYLWDDNETVLFANMRDEEDRKAVENGEERTCFYRISIHGGEAVKAFTIPLQVTSI KKAADGEYVFCADYHLEYSRMYQMNADEKDKILQEKKDMQDYEVLDELPFYGNGMGYTNK KRNSLFLYREHDEDIVRISEETCNVYDVELSDNHEIVYYTGESYACKPINKEGVYAYYRN TGEHREILPAGQWSIGKILPWKDNIMMLASEQKRYGLNENGMFYQLNPKSGAVELFASYE DAVGSSVGSDCRYGGGKSICLYKDTVYFITTLFNRSSVYALHSDGSITPVYDREGSVDVI ALAKDRLYFAGMQDMRLQELYSYDMHGKSCRQLTGFNEEFYAEKDIRPCVPCNFTQDGME LYGWVLEPRGFDPKKSYPAILDIHGGPKTVYGEVYYHEMQVWANQGYFVFFMNPRGGDGR GNSFADIRGKYGTIDYEDLMKFTDEVLKKYPAIDTARVGVTGGSYGGFMTNWIIGHTDRF KAAASQRSISNWISFAHTSDIGEMFGADQQGADTWKNVDKLWWHSPLKYANQCTTPTLFI HSDEDFRCPYSEGMQMYSALCEHGVATRLCMFKGENHELSRSGKPRHRVKRLKEITTWMD TYLKD >gi|312956450|gb|AENW01000011.1| GENE 3 5121 - 5915 473 264 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2209 NR:ns ## KEGG: Cphy_2209 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 12 264 15 268 314 165 35.0 2e-39 MTNLDITKTGRWMHRNARGLELAKWRFYFEGGDAGAVVDELQYYQNTDGGFAHALEADCW NPASAPSQMFYAIHILHELDYKDKTHPVIQGMMRYLESGKDMEDGFWISILSSNNEYPHA PWWTKTEKKTFDVYMPNADICWFILNFAQKDSSLYTKAESMVQRMLDLFLSQKEVEPHSL ESMMFLLRELQKTGSFCGPQTDAAAAHGIQLMRGLIEEDPDHWNAYCITPSFFIHDRLHP LYPEYSTLLKLEVQRIMETRDAEG >gi|312956450|gb|AENW01000011.1| GENE 4 6576 - 8894 2046 772 aa, chain - ## HITS:1 COG:SMc00038_4 KEGG:ns NR:ns ## COG: SMc00038_4 COG2200 # Protein_GI_number: 15964712 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Sinorhizobium meliloti # 505 754 6 257 257 191 38.0 5e-48 MYSLGKKQKTHTKLTIGILILMIITMIGLSSMMIQQSKSLIMNETQRYLSELSKQTSSRV DQNIAKNIAQLREVSANLSEIATTDAVGQTIIDSVLKENDFSWIGYVDMNGLLHVKNHKT VSVTKLEIVLDALHKQKSGVSKQLETLYDETGILYAVPFYVQGHIKGAMVAWSNTENLQL LSDTDTFNGVGFSYIISQDGDFIMHSSNPYAVFLKNDFYKSIQDVADIDSGSSLSKMKSD IHNRKSGTIHYMVHQDVRGEPEERTLYYTPLQEGSLYLLSIAPSMIYAKNIQDYTNFSVM INVFIFLVFGILILYILFTNTKFNKEIYRVAYVDPVTNGFTAPRFEKEMQGILDNFQPFA FVSVDIRKFKLINDSFGSRDGDRVLQYVHDCLQSYLKEGEFLARISSDTYNLVLFTTDMA EIRERLEAMTDKVNSYNQSKEQTYYLPLDCGIYIVTDSSIDIVNIRDRANTARKNNKDMI SRHMCSCVFYDDYDRVQMLKEKKMENSMQQALENGEFIVYLQPKINLEKSEIVGAEALVR WNSQDGLISPGEFIPFFEKNGFIVKLDLYVFDCVCRLLQDWENRGIAPIPISVNLSRNHL LDPQFLKKYEAIQKTYGIASHLLEFELTETVVFENLELLKNVIAQIHAAGFQCSMDDFGS GYSSLNVLKEIPVDILKLDGAFFDKEGDPRGNDVVETAIELARKLGMKTVAEGVETFTQV EFLRNADCDMVQGYVFSKPLSIENFEVLAFSARKAKTDTNSEYNRTGKTSNE >gi|312956450|gb|AENW01000011.1| GENE 5 9148 - 9921 446 257 aa, chain - ## HITS:1 COG:no KEGG:Cthe_2036 NR:ns ## KEGG: Cthe_2036 # Name: not_defined # Def: amidohydrolase 2 # Organism: C.thermocellum # Pathway: not_defined # 45 257 1 214 218 149 34.0 9e-35 MDSEQKRRILDAHMHLPTQGISLSEKKEILLKEMQKNGIDEGIVISDSAITSEIGSLKDC LELFSDTCYVHVVGGISPFFNYKEQCKLLDTALSEKKIVGIKLFCGHESFYLSDNILEPV YALAETYNVPMLFHSEKDSSQYASYFAVCEAVRQHPNITFVCCHCHYPNVEACFQRYKNV NNIVFDISSIADVQMTADMRKAVQSELQRHPDAIMFGSDYAGCSQADHLEFAMSLAVSDD IQSRLLYKTAYRVFHLA >gi|312956450|gb|AENW01000011.1| GENE 6 10077 - 11393 1455 438 aa, chain - ## HITS:1 COG:BH0897 KEGG:ns NR:ns ## COG: BH0897 COG2265 # Protein_GI_number: 15613460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 3 438 18 463 463 261 35.0 2e-69 MKVTIKKTGINGEGIGYIDRMPVFVPQALIGEEVEIRIVDKQKRYATAELLRVVKSSKNR IRPKCFIQNTCGACPLMIARYPAQLEYKQDLLKQSLIKYAQIDPRKVARVKASEDVFGYR NQFKLPCAMEEGRLVSGLFMPNSNYFIDVKKCWIHEDGLERVRMDIMHVLNTHDCVSYNP HDKKGIRNLVVRGFDNRYQCTIVTGNEELDERLISDLMRIKGLTSLWQSIHTIKKTPEVF GNKMMHLAGETSLAMELDGLKLRISPRSFFQLNSKQAVQLYRTIASMVKENNELIVEAYS GIGAISLYLKDKAKEIIGIESIKDAVVNANQNAALNGCEHVSFLCDDAANKLTYLSKKRS IDVLVVDPPRSGLDDAMLECILRSKIKNIIYVSCNPATLGKNLAVLCSRYNVDRIQPIDI FPHTPHVESVVLMSRKNK >gi|312956450|gb|AENW01000011.1| GENE 7 11415 - 12233 820 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915379|ref|ZP_02077591.1| ## NR: gi|160915379|ref|ZP_02077591.1| hypothetical protein EUBDOL_01387 [Eubacterium dolichum DSM 3991] # 1 268 1 272 275 290 61.0 5e-77 MKWIMDLYREFTSFEGSLFKYSLSFSLLLALAPSLLLIAMLFRFAYLPMDIIMKFLISFM PDMSMDGLDQVFQFFANQNYNITSFIVTMCVSFYLASRSIFSFLLISASHESVEVPKWSI RIKSVVLFVSLVLLLVLSIFIATRLNEFLPIVSAVIMLLLFTMMYRALSFRKRNWSFGII GAMFSTICILGLAALFVTIVSHFTSYKDVYGPLASLVTLLLAIYLISCIIYLGFCLNLIC EEDYGREEALPLKNEKFFILCSELTKRIRSRF >gi|312956450|gb|AENW01000011.1| GENE 8 12287 - 12772 743 161 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401175|ref|ZP_06645319.1| ## NR: gi|293401175|ref|ZP_06645319.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 159 1 158 159 131 45.0 1e-29 MKKLLIIGLLLCLMSGCQKNTGTFAQGDKNLSSVFADINEQIADGAFSIPLLKDTALSER EVEALYQLDMTKIESCMVKTAAVQAQLGEIALFQVKKEHEGDVKKAIKSRKEALKKQWGA YVPEAADLLYQAKEGRIGQYYYFVLGSDSEKVVNYMQKMDA >gi|312956450|gb|AENW01000011.1| GENE 9 12988 - 13377 517 129 aa, chain - ## HITS:1 COG:no KEGG:DSY1548 NR:ns ## KEGG: DSY1548 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 21 118 4 101 102 102 43.0 4e-21 MNSFENNAFFWQKLDTLFLSSKLVIDRPRNTCHYKYSNLVYPVDYGYLNDTTGSDQAPID VFRGSEKSNLVQSVVISADILKKDCEVKLLVGCTEEDENDILEFLNQTEFQKAVLIRRGN EVPEWAQND >gi|312956450|gb|AENW01000011.1| GENE 10 13392 - 14417 1050 341 aa, chain - ## HITS:1 COG:AF0807 KEGG:ns NR:ns ## COG: AF0807 COG1304 # Protein_GI_number: 11498413 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Archaeoglobus fulgidus # 37 337 82 364 366 144 34.0 3e-34 MKTWQEVYANAKTLCAKCRCCPVCNGLACRGETPGPGGKGSGSAFVRNAEMLKKVFITMD TISDNTEIDTTSEFFGHKVSFPVYAAPISGILQNYGAELDDMSYTRALVDGCRRAGTLAF TGDGMHDEMFKGPMSVVAQHEGFGVPTIKPWSREHMAWRIELAKEGHALAIASDIDASGL TNLRTSITPVGFKNVEELKEITRICGDVPFILKGILSVKGARKALEAGASGIIVSNHGGR VLDDCLSGIEVLEDIVKVVDGRMKVFVDGAFRTGNDVFKALALGADGVLIGRPVSQAVIG DGSDGLVTYLEKIRLELKEAMAMAGCKTIQDITRDCVSVTF >gi|312956450|gb|AENW01000011.1| GENE 11 14748 - 15185 492 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401178|ref|ZP_06645322.1| ## NR: gi|293401178|ref|ZP_06645322.1| hypothetical protein HMPREF0863_01462 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 145 1 149 149 127 43.0 3e-28 MKKFILSVFCCMLLLTGCSNKVQEKGKVQQIGIEDAFSKMDKKETFLLMITRDKCYYCQL IHKMLDDTIEDHPTTIYNVKMDDSTTENLYADNDLLKTRLEKPGTTPHVYYIKDGVVKDD ITGFDEENPLEFWEWVKKHNIENLK >gi|312956450|gb|AENW01000011.1| GENE 12 15409 - 17988 3141 859 aa, chain - ## HITS:1 COG:CAC2241 KEGG:ns NR:ns ## COG: CAC2241 COG2217 # Protein_GI_number: 15895509 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 167 857 9 698 699 677 49.0 0 MERIYILDELDCANCAMKIERHVGKIKGVKECSVDFVSKRMFVDMEHEGIEAVLEETVQA IEPDVILRRKDDKKAASAGKQGASGKAGHSKAEEHYSAQEDCGCKKAHHHDHADCACAHT DGHDHHDACNGSHAHENDGHHHHEGCGCGHDHAHEAHEDREIQGALKLYVKNLDCANCAN KIEAYVRKMDNIKDASMNFSQGVLFVELQDASRSEDTIKAIMAVIPTLEDGVTVEREKST EEEKPSRMFSFQENARLYLGILLFAAAVVLEAQSWSVWLFLAAYVMAGGKVVYIALRNIL KGEVFDENFLMSVATIGALAIGSYEEAVAVMIFYEIGEMFQSYAVNRSRKSISSLMNIRA DYANLWKDGKEVRVSPEAVGLHDLIVIKPGERVPLDGVIVEGTSSLDTSALTGESLPRDV GVQDEVLAGVVNLSGVLKVEVSKAYGESTVSRILELVENASSKKAPMEKFITRFAKVYTP TVVFLAIALVVLPMLFIPDAVFTDWLYRALTFLVVSCPCALVISVPLGMFAGIGAASKSG ILIKGGNYLEALKDIDTVVFDKTGTLTKGVFTVTQIHAIQRSEDELLEMAAYAENYSTHP IALSIRKAYAKTIDAERLSRYEEVAGNGIHVQLDQHELLVGNYKLMQANGITYEEHDALG TIVHIAVDGTYEGYIVIDDEIKETSKEAIASLKSSGVKKCVMLSGDRYKVGEHVASVLGL DEVHMQLLPADKVEKVEELLQQESEHGKLAFVGDGINDAPVLARADIGVAMGGIGSDAAI EAADVVLMKDDPSALSTAIRIAGKTMQILWQNIVFSLGIKVVILILTAFGMANMWMGVFA DVGVTLIAILNSMRALKIR >gi|312956450|gb|AENW01000011.1| GENE 13 18070 - 18696 551 208 aa, chain - ## HITS:1 COG:CAC0567 KEGG:ns NR:ns ## COG: CAC0567 COG0500 # Protein_GI_number: 15893857 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 10 199 6 202 209 83 28.0 3e-16 MTSGILYPCRIVSQFRRPTGFGGRCATRVMNIMNRAQYHRVLKELPLQGRILDIGFGNGN MLKRVLKKGCCSVYGTEISESCMTAVEWKLLPSLQQGYLKLAMGSAESLPFADACMDTVY SINTIYFWESLDKGLCEIARILKPQGTLLLAFYDKRFMSRLPLREYGFQLYDPKDVKAAL KHNGYTSIEVHEVKKEKSYCIRAKRGNV >gi|312956450|gb|AENW01000011.1| GENE 14 18737 - 19096 458 119 aa, chain - ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 8 118 11 121 122 125 54.0 2e-29 MVKEAMECEVTEVHTDTVARLKDTLLSQEQFQNLGTLFKMFSDPTRLKILSALFQEELCV CDLSELLEMTHSAVSHQLSVLRQNRLIKYRRSGKNIYYSLDDEHIQLIFDAGLSHIMEG >gi|312956450|gb|AENW01000011.1| GENE 15 19359 - 20513 1378 384 aa, chain - ## HITS:1 COG:SA2220 KEGG:ns NR:ns ## COG: SA2220 COG1929 # Protein_GI_number: 15928010 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Staphylococcus aureus N315 # 2 372 5 377 380 235 37.0 1e-61 MKVVIACDSYKGCMTSREVAERIELGIRQVDDAVITTSYVIGDGGEGTVEAFHETCHGRK QPVSTTDAYGKKIISEYTIIENGETAVIEVANIIGLNMHERDKRAPFFGSSYGVGTVMLD AAAQGCRKIIIGLGGSATNDGGMGLLQALGCRFYDSSHKYLSPQAMNLDKVRYIDFNRLN KLEGIELIAACDVKNHLLGENGATYVFGKQKGFFPNQIRKIDLGMENFRNQVRRYLHVDI DSFDGGGAAGGIGAVLIGILHANMISGIELLLSFSDMEEQVKDCDLVITGEGQSDRQTMF GKVPVGILKVANRHHKPCICISGALGIGYQELYDLGFIGIYSIADRAMTFQQALDNAPDK LTATTYGVMKTVMYYMNRINGNRG >gi|312956450|gb|AENW01000011.1| GENE 16 20514 - 21860 785 448 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 11 443 10 442 456 306 37 3e-82 MDKLMLMNDQLNAVVWGKYMIFFLLFTGFWLMLRTRFLPFTHARLILRKTLGSLGKGDKG DGVTPFQAVATALAGTLGVGSVVGVTTALTMGGPGALLWMCVSAIFGMMTKYAEVVLAIH YRTRERDGTFIGGPMTTLENGCHMGFLGILFAVLCIFASFGIGNVTPANTIAHTITSYIS IPSWSIGLIMALFIAWIIFGKGNLIMRFNEITIPVISVLYIAACLYLIVLHADALPQALR LVWYDAMRPMAGVGGIGGFAISRAMHFGISRGVFSNEAGMGSSPISHACVSHANAIEQGF WGIFEVFFDTIVVCTITGLMILTSGLLDSGMEGVALTVACFTSGFGHLGGIIFSFSIVAF AIPSILGWYYYARECLRYLFKGKLMLYIYQGVFLVLLVFGAQLQLTFVWDVADTLNGLMA IPNLISLVILCRVVVKLTKEYLEEHGSD >gi|312956450|gb|AENW01000011.1| GENE 17 21973 - 22506 717 177 aa, chain + ## HITS:1 COG:CAC1629 KEGG:ns NR:ns ## COG: CAC1629 COG0693 # Protein_GI_number: 15894907 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 1 172 1 174 188 110 35.0 1e-24 MNVMCILTDGFEELEAVGTIALLRRAGIRIDVYAIDHTAATGRFDITISNLADVKDVNTA DYDMLFLPGGPHYQKLEADERVLSILKDFMDQGKLVSAICAAPTILGRQGYLKGRKYTCF TSMNEDFGGTYVDQYAVIDGTIITGRSAAAVIDFAFAIIEKLEGRKKAEEVKASIYY >gi|312956450|gb|AENW01000011.1| GENE 18 22682 - 23590 851 302 aa, chain - ## HITS:1 COG:CAC1006 KEGG:ns NR:ns ## COG: CAC1006 COG0494 # Protein_GI_number: 15894293 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Clostridium acetobutylicum # 1 133 1 133 146 142 52.0 1e-33 MKVRFYDSVQDEKLRFAVIAVWCRSGWLFVRHRERDTWELPGGHREAGESIDACAQRELL EETGIADARMKRICVYSVEGKTRVNETGEESFGMLYQAEASSFKELPQSEIAEVRCMTAL PEALTYPAIQPLLFHMAIKSCLRYEIFDGCNPDDSRAVLKQLPEWFGLPDALEDYVQKSR EMKTVGCYFKNYMVGFLSLKKTSAKAMEVYVMGILPQLHRMGIGTMLMRMAEQEAEKAAM QYLQVKTLSPKVQDPDYLKTYAFYERMGFCPLEVLPLWDEWNPCQLMVKYIAMKQQPALC KP >gi|312956450|gb|AENW01000011.1| GENE 19 23816 - 24760 1135 314 aa, chain + ## HITS:1 COG:lin1052 KEGG:ns NR:ns ## COG: lin1052 COG0598 # Protein_GI_number: 16800121 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Listeria innocua # 14 288 15 285 314 257 48.0 2e-68 MLEFYKTYGTVTKKLEQPEPGCWISAVAPTQEDIDFLTNKIGVLPEFIKSSLDEEESSHI DYDDDENQTLVIVDYPSAEEDDNLDENTLLYTTLPLGVVIMKGYVITISLYENLSIEDMA NGRIKGMNTDMKTRFLLLLLLRISQRFLIYLRQIDRISSRTEQRLHQSMKNKELIQMLGL EKSLVYFSTSLKTDEVTLNKIMRGKLIKLYEEDQDILEDVLIEIHQAIEMCNIYSNILSG TMDAFASVISNNLNIVMKILTVITIVMAIPNIIFSFYGMNVSGLPYPEWWFPTVIAAVCC IIATLIFKKKDMFH >gi|312956450|gb|AENW01000011.1| GENE 20 24835 - 24945 125 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNNPWTDIELQTYEAHMQDTDEGFVSDSPYLHSFAV >gi|312956450|gb|AENW01000011.1| GENE 21 25597 - 26217 750 206 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401194|ref|ZP_06645338.1| ## NR: gi|293401194|ref|ZP_06645338.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 206 1 206 207 281 74.0 2e-74 MNLKIENWKLLILSIFYMIFSILSYTIEKEKFLNFFQIAGIVIILVGLFQILVYFFKKEY MKPNEFSFSFGVIYCIAGLIVATKPYLIVDNYPIVISALVVLDATLRLQYSMNLFRLEDA QWKIHLALAVVPLLMGMVLILVSFEEKTLHNLFSFLLILDAIANFYTILYYRGVARRYGR HSEQILDISNQEATAHEVIDGKDNMV >gi|312956450|gb|AENW01000011.1| GENE 22 26361 - 27398 860 345 aa, chain - ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 24 345 24 339 339 324 61.0 1e-88 MIFIKEKGKGLLVCFGIAAAALLLGQWIPIIGGPVFAILIGMLLAFRIREEEALQAGIIF TSKKILQYAVILLGFGLNLSVIAKTGQQSLPIILATITTSLVIAYGLKRRLHMPANISTL VGVGSSICGGSAIAATAPVIAADDEEVAQAISVIFLFNILAAVLFPWLGTLLHFHGSEGF GVFAGTAVNDTSSVTATAATWDSMFHLGSATLDKAVTVKLTRTLAIIPITLFLGVQRMRK EEQEEKREGKKLAWKQVFPVFILYFLMASVITTVSTNVLHISPGIFLPLKELSKFFIIMA MGAVGLHTDIVKLVKNGGKPIFMGFCCWVGITLISLLMQRLLGIW >gi|312956450|gb|AENW01000011.1| GENE 23 27608 - 28459 831 283 aa, chain - ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 7 247 6 249 289 79 27.0 8e-15 MRTNQEMMQSVLCYIEEHLDGELTLDTIAAFTDYSPYHVHKLFTAICGMPLHAYIRRRQV SKGALLLVQSDLRIAEIASACGYLSQRAFHKAFLQLYRTTPDAFRKKKNAYVLQEPLQLH QQPDINHMHMDMEVQYWTEIQLEGYGADTRHGFHVIGKCHRKCNRYLKAYPQKDSVVYGI HDYTDADMDAGQPCFQYFAGIAVEQVHRQKLTHRILPAGAYLVFSFCADPKTSMEPFAQD IYQNWLPKSAYRLRSDCCMDIVKYGKENEQGIARIEYCIPVLK >gi|312956450|gb|AENW01000011.1| GENE 24 28621 - 28944 526 107 aa, chain - ## HITS:1 COG:CAC0943 KEGG:ns NR:ns ## COG: CAC0943 COG0140 # Protein_GI_number: 15894230 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Clostridium acetobutylicum # 4 107 7 110 110 96 58.0 1e-20 MKELDALYETIKDRKENKEEGSYTTYLFEKGLEKILKKVGEECTEVVIASLTQTKEDQIN EIGDLLYHLTVLMVEKGISMEDVNAELERRAQKTHNLKAERKPIEHL >gi|312956450|gb|AENW01000011.1| GENE 25 28941 - 29267 303 108 aa, chain - ## HITS:1 COG:CAC0942 KEGG:ns NR:ns ## COG: CAC0942 COG0139 # Protein_GI_number: 15894229 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Clostridium acetobutylicum # 7 107 11 111 115 138 64.0 3e-33 MIQVNFDKGNGLVPVIVQDVHSRAVLMLAYMNEESLRMTMDTGRATYYSRSRQELWIKGE TSGHYQYVKDIRIDCDEDTILLLVEQVGAACHTGHTSCFYRNMEGEEL >gi|312956450|gb|AENW01000011.1| GENE 26 29264 - 30025 994 253 aa, chain - ## HITS:1 COG:lin0572 KEGG:ns NR:ns ## COG: lin0572 COG0107 # Protein_GI_number: 16799647 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Listeria innocua # 1 252 1 250 251 323 63.0 2e-88 MHTKRIIPCLDVKDGRVVKGINFVGLKEVGDPVDLARAYYEQGADELVFLDITATHEQRD TMVQVVERVAREIFIPFTVGGGIRSVEDIRNMLLAGADKVSLNSAAVRNKELIREGAAMF GNQCIVLAVDGKRREDGSGWNVYVAGGREDTGLDLLEWVQEGVRLGAGEILLTSMDADGT KQGFDIELCKAVHELVDVPVIASGGCGTLEHFAQVFEEDASDAALAASMFHYKEVTIPEV KAYVKEKGIAVRL >gi|312956450|gb|AENW01000011.1| GENE 27 30025 - 30744 881 239 aa, chain - ## HITS:1 COG:lin0573 KEGG:ns NR:ns ## COG: lin0573 COG0106 # Protein_GI_number: 16799648 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Listeria innocua # 1 233 1 233 240 231 50.0 7e-61 MIILPAIDILDQQPVRLYQGDYEQKECVGDSIGDIAKAFEQQGARYVHMVDLNGAKEGKK INQDIIVKTAQSLQIPVEVGGGIRSMEDVRFYLEHGIARVILGTAAIENPEFLREALAQY KEKIAVGIDCKNGMVCGHGWLQESELQYIDFAIQMEAMGVKTIIVTDISRDGTMTGPNTK MLAELKKTVSIDIIASGGIRDITHIEALKQLDIYGAITGKAMYAETLSLSQAIALCGEA >gi|312956450|gb|AENW01000011.1| GENE 28 30741 - 31364 779 207 aa, chain - ## HITS:1 COG:BS_hisH KEGG:ns NR:ns ## COG: BS_hisH COG0118 # Protein_GI_number: 16080542 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Bacillus subtilis # 1 204 1 203 212 181 46.0 6e-46 MIAILDYGMGNLHSVENALQHIGCTCCVTDKKEDLQRADQLILPGVGAFADCMKHLQERD LITALKEEVQGKKKPLLGICLGMQALFEDSEENGYTKGLGFLKGNIVKMSDAAESRLRIP HIGWNLLEQCQESSVFERLSERPFVYYVHSYYAQNYAQEDLLADSGYGGMRIPGLVRRDN VVGAQFHPEKSGEDGLQILRWFKEEFV >gi|312956450|gb|AENW01000011.1| GENE 29 31366 - 31977 771 203 aa, chain - ## HITS:1 COG:CAC0938 KEGG:ns NR:ns ## COG: CAC0938 COG0131 # Protein_GI_number: 15894225 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Clostridium acetobutylicum # 13 203 5 197 197 203 54.0 2e-52 MKPETKETGIASRTAGLSRDTKETSISCTMHLDGTGVSEIHTGIGFFDHMLTLFSFHSGI DLTLHANGDLQVCDHHTVEDCGIAMGACLKEALQDKRGIERYGSMLLPMDETLAQVVLDI SGRSFLVYNCELKRDTIGSFSCEMVEEFLRAFAFQAGITLHVNVVYGTNDHHKVEAIFKA LGRALKTAIRVSGDTLPSTKGKL >gi|312956450|gb|AENW01000011.1| GENE 30 31974 - 33008 1215 344 aa, chain - ## HITS:1 COG:NMA1771 KEGG:ns NR:ns ## COG: NMA1771 COG0079 # Protein_GI_number: 15794664 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Neisseria meningitidis Z2491 # 30 337 46 357 365 157 29.0 4e-38 MKNIESYAARTNGSVMLNANECYKNISGEMVKELQEAIAELEFNRYPDESSRELIQAYAN VKKLDAGYLIAGNGSDEMLGLMIGYFLGKGKKLLTLSPDFSMYDYYASMHESEVVKFPCE QDGSFSIADFIEFGREHHVDMVLFSNPNNPTGHFVSNAQLCKIAEAFPRIPVIIDEAYGE FAKESMLAYLDTYHNLYVTRTLSKAYGFAGARLGFLISCPSNIAKLKPVLVPYNISSLTQ RAGVIVLRHAAEYELLVEEIQLERDMLYHKLKQLKNVTFYPSQANYLYGKSKYKQELLKA MEKEGIVIRNYEGKDSFRITVGSPAENAIVLSVLQEFDRKAVTV >gi|312956450|gb|AENW01000011.1| GENE 31 33005 - 34288 1583 427 aa, chain - ## HITS:1 COG:CAC0937 KEGG:ns NR:ns ## COG: CAC0937 COG0141 # Protein_GI_number: 15894224 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Clostridium acetobutylicum # 17 426 22 431 431 439 54.0 1e-123 MLKRMRASDTGNLQTYLESRTEEIDSEIIVRVSAILQDVKTRRDDAVREYTQQFDGILLD SMRVEPSDIEAAAAKADPFFVESMKKAKANIEYYHNAQKQNGYLLQKELGIYLGQRVLPL DSVGIYVPGGRAQYPSSVLMNAIPARIAGVKRIVMLTPPAKDGSLHPNIAAAAQIAGVDE IYKVGGAQGIAALAYGTQSIAPVDKIVGPGNVYVAAAKKLVFGKVDIDMIAGPSEILVIA DADAPAKSVAADLLSQAEHDPMASAILVTTSEQLVDAVELELRKQSALLPKQEIVEQSLQ AYGTAILCESMEECLDVSNAVAPEHLELMVKQPMDYLGKVRHAGSVFLGYHTCESVGDYF GGCNHVLPTSGTARFSSALGVDSFIKKSSYLHYSEEALQTYGDHIIEMAEQEELQAHANA VKVRLKS >gi|312956450|gb|AENW01000011.1| GENE 32 34282 - 34914 857 210 aa, chain - ## HITS:1 COG:CAC0936 KEGG:ns NR:ns ## COG: CAC0936 COG0040 # Protein_GI_number: 15894223 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 2 208 6 212 215 237 60.0 1e-62 MSISIALTKGRLEKATVKLLEERGYGIESLKDKGRALVFQDSKKDIRYFLVKSNDCITYV QHGVADIGVVGKDTLLEGGKDYYEMLDLGIGKCKFIVAGLREHNLFDKVGHVKIGTKYPN IAKQYFLEKGMDVECIKIDGSVELAPILGLCDGIVDIMETGTTLKENGLVVFDTVCDISA RVIVNKASFKLKRAEILAILEDMKKGLEAC >gi|312956450|gb|AENW01000011.1| GENE 33 34911 - 36035 1470 374 aa, chain - ## HITS:1 COG:CAC0935 KEGG:ns NR:ns ## COG: CAC0935 COG3705 # Protein_GI_number: 15894222 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Clostridium acetobutylicum # 1 323 4 327 407 229 34.0 5e-60 MKRFAIPEGTRDLILGECTAKKRLQGAIEQVFDSYGYKEIVTPSIEFYQTYQTGFEQIQE EAMYKFFDHNGSILTLRMDMTVPIARVAATKFKDQKPPLRFRYCANVYKVKESFAGKRNE VTDCGIELLGLNEKQSDLEILVCALEVMECMQQQAYTLEIGNVNFFHTAGKLLGLSADET ELLADLIDRKSLSELKEYLHTLPLKDEDREFFLQLPWLCGDAGMLKEALNCCFDDRLRSI VESLQELYAQLKALGYENRITFDLGKLPHLNYYSGILFEGFVPGIGTSVLSGGRYDSLLE KFGEPLPAIGFSVKLDAVLPVLDLKQKEATLTLCYPYARKVEALRKARELRKTARVELLC GVYDDIIVKGEKDA >gi|312956450|gb|AENW01000011.1| GENE 34 36760 - 36921 304 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEEKHTCVLNHDEYELLNFYRQLSEERKQKFFDLVQTLDMLLNQQEDTTAVAE >gi|312956450|gb|AENW01000011.1| GENE 35 37126 - 37482 345 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401206|ref|ZP_06645350.1| ## NR: gi|293401206|ref|ZP_06645350.1| putative toxin-antitoxin system, antitoxin component, Xre family [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 112 1 112 117 120 56.0 4e-26 MKKVTEINLRVGDAIRKGLQRKGMTQKELAALVGSTQRSISSYINGNAQPPLDILSLICR ILEINMNQILQIPDFNFPGRMLHDPMELEFMKIFDQVPEERRMTFTKLMKSILSFHLE >gi|312956450|gb|AENW01000011.1| GENE 36 37680 - 38408 924 242 aa, chain + ## HITS:1 COG:BH3325 KEGG:ns NR:ns ## COG: BH3325 COG4821 # Protein_GI_number: 15615887 # Func_class: R General function prediction only # Function: Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain # Organism: Bacillus halodurans # 17 237 15 240 242 178 43.0 9e-45 MAFIDTYFKEVKQRFAVMKQEREPLEQAARLLFEAEKEHHTIYTFGSGHSHMIGQDIYAR AGGYAKVYPINEIEMTLATHPTKSTTLERTASYADVLDAIYTIEAGDVLLVTSNSGRNPL VIEYTMRAREKGARIIVITSLSHSKTIASRHESGLRLFELADVILDNHAPYGDATTPIDE ATSMGPVSTLTGCFLAQCVMGRFVELLKEHGMEAPVFASSNMDGADERNRELFDKYVIKT VK >gi|312956450|gb|AENW01000011.1| GENE 37 38757 - 40082 1431 441 aa, chain - ## HITS:1 COG:CAC0326 KEGG:ns NR:ns ## COG: CAC0326 COG2256 # Protein_GI_number: 15893618 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Clostridium acetobutylicum # 3 438 5 437 443 580 62.0 1e-165 MEQNSLFQNDVQKDPLAARLRPASLQDYVGQKHLLGKGKILYNLIEKDMVSSMIFWGPPG VGKTTLARIIARQTQAHFINFSAVTSGIREIKAVMKEAEDARLYGRKTIVFVDEIHRFNK AQQDAFLPYVEKGSIILIGATTENPSFEVNAALLSRCKVFVLKALEVSDLVELLKHALQD ERGFGSQHVLITEEQLHMLAVFANGDARTALNTLEMVVLNGESSEAGIVITKEVLEQCTS QKSLLYDRQGEEHYNLISALHKSMRNSDVDAAIYWLARMLEAGEDPLYVARRLVRFASED IGMADSRALEICVAVYQACHFLGMPECNVHLTHAVTYLSLSPKSNALYMAYGAAKEDAVH MLSEPVPLQIRNAPTSLMKDLHYGEGYQYAHDTQEKLTNMECMPESLKGREYYHPTIQGS EARVSKRLQDIKEWKRKHQNK >gi|312956450|gb|AENW01000011.1| GENE 38 40101 - 40916 900 271 aa, chain - ## HITS:1 COG:lin2067 KEGG:ns NR:ns ## COG: lin2067 COG0005 # Protein_GI_number: 16801133 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Listeria innocua # 1 270 1 270 272 291 52.0 8e-79 MFYEQVEESVQYIRKHVKTEPLIGIILGSGLGSLVEMMEDKEVLSYQDIPHFPQSRVAGH AGNLVFGRIGNQRLIVMQGRFHYYEGFSMKEVTYPIYVMKLLGVRDLIVTNACGGINPDF KPGDLMIIDDFINSLDVNPLIGDNDERFGPRFPDMSEPYSIQLREKAEQVADQLAIPYRH GVYTLFQGPYYETAAEIRMYARAGSDAIGMSTVPETIAANYLGIRVLGIACITNMATGIA KEKHSHEEVVKMANKSSARLCTWMEALLKEW >gi|312956450|gb|AENW01000011.1| GENE 39 41206 - 41805 681 199 aa, chain - ## HITS:1 COG:MA0513 KEGG:ns NR:ns ## COG: MA0513 COG0110 # Protein_GI_number: 20089402 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Methanosarcina acetivorans str.C2A # 1 190 9 198 199 248 60.0 4e-66 MSEKKKAEEGFLYNANYNAALLDERAWCKDQCHLCNQLRPSDTEKRYQIYHSLFKQMGKH VSIEPPFWCDYGYHISIGNEFFMNHNGVILDGAEVTFGDYVYIAPNCGFYTAGHPLDVEQ RKQGLEYAFPIHVKSNVWIGAGVQVLAGVTIGEGSVIGAGSVVNRDIPDHVLAAGVPCRV IRRITEEDRKKYRIQMEES >gi|312956450|gb|AENW01000011.1| GENE 40 42352 - 44256 2429 634 aa, chain + ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 377 1 377 377 622 84.0 1e-178 MLFTTTQQQEEIRKTVREFAETEIKPIAFMLDKENEFPSEAIAKFGKMGLMGIPYPKEYG GAGLDVISYAIAVEELSRVDGGTGVILSAHVSLGSYPIFAFGTEEQKQKYLVPLASGEKI GAFGLTEVNAGSDAAGTETTAVLEGDYYILNGGKIFITNADKADTYVVFASTNPEMGTRG ISAFIVEKGWDGFTFGDHYDKMGIRSSSTAELIFNDVKVPKENLLGKLGQGFKIAMATLD GGRIGIAAQALGIAQGAYENALEYAKERVQFGKPIAQQQVISFKLADMATKLRCARMLIY SSAELKENHEPYGMESAMAKQYASDVALEICNDALQIFGGSGYLKGMEVERAYRDAKITT IYEGTNEIQRVVIASHIIGKAPKDGGVRKKKGAITGERKKQIFKEGDAQERVNALVEALQ KDGYDFTVGIPMDTPIMNAERVVSAGKGIGEKKNMKLIEDLARSAGAAIGSSRPVAETLK YVPINRYVGMSGQKFTGNLYIACGISGAGQHLKGIKDATTIVAINTNANAPIFKNADYGI VGDVMEILPLLSKALDTGEKKPAPPMKKMKRPFIKKEAPSYMRHVCNGCGYEYDQMLGDP ENDIAPGTPFEKLPEEWICPECGEAKDQFIETLD >gi|312956450|gb|AENW01000011.1| GENE 41 44279 - 45484 1422 401 aa, chain + ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 399 1 403 405 597 68.0 1e-170 MYCVRKVVDDLYWVGGNDHRLALFENIHPIPNGVSYNSYLLLDKKTVLFDTVDWDACRQF LENVEHVLNGRDLDYLVINHMEPDHGASIEEILLRYPKVKIISTEKSFLLMHQFGFNVDG RTEEVKEGDTRCFGKHTITFVEAPMVHWPEAMVSFDVTNGVLFSADAFGSFGALDGKLFN DEVDFDRDWLDDARRYYTNIVGKYGPHVQALLKKAGTIDIKVICPLHGPVWRNDFGYLLD KYDKWSRYEPEETGVLIAYASMYGNTESAAQVLAAKLVEKGVKNVVVHDVSNTHVSYLIS DAFKYSHIVLASVTYNLGIYPVMHDFLMHMKALNMQKRTVGIIENGSWAPKSGSLMKDFL DNQMKQMSILNSEVSMISALNDNNKSEMDNLVDSIIDSMEA >gi|312956450|gb|AENW01000011.1| GENE 42 45848 - 46975 961 375 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIRNYGLVLLACGMLFAGGCSKEEAKKKAEDLKLEDLTIVLHDENITIYQPLGDLLDIW ELDQAPEHIEALGHDMVFLTYKDNDRESMILRVFNPKDEEISVNDALIQRVVFSDRNTEN VKEYKLPHNFKIGSTTEQDVIKALGTPYEYRISNDDSNMDYVTGTSYETSELAEFSFEKG KLSKVALSGSEKRKEKKENISFDTAKAVGYSVYDIPFAKGSAADEFAKGSIQFDGVSINK TTPAKALIEKGWKSKYLDEYNKKETTISAEKSDMRIDLRVDGTISSTDQLTEKHLIQEIF AADESLEALTFASGVNGTSTLQDVYQVLGKPMSVRYSKNGVRVRYRTESNTAVSMSFKTS GAMEYCSVKFDSEWE >gi|312956450|gb|AENW01000011.1| GENE 43 47599 - 49770 2618 723 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3030 NR:ns ## KEGG: Cphy_3030 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 6 718 7 720 724 1021 66.0 0 MNTKKGRVTVPTDVDVIEETLNIIERWGADAIRDCDGTSMPEQLRELDVKQYATYYTTRK DNAWASANPQEIQQMYLMSDMVTASAQTLTIPLMKHYYKEQLKVNTLDDIKRWWEVIDRT SGDVVAADKWEYDAEKEAVVVLECVPFHAYTVSFLAFVIWDPVHMYNALTNEWKHEEHQM TYDVRQPKTQAYVLDKLRRWIAEHPEVDVIRFTTFFHQFTLMFDEQAREKFVDWFGYSAS VSPYILEQFEQEVGYRFRPEYIINQGYHNSTFCVPTKEYRDFMDFQMREVARLVKKLVDI THEAGKEAMMFLGDHWIGTEPFGPYFQKLGLDAVVGSVGDGRTLRLISDIRGVKYTEGRF LPYFFPDVFHEGGDPVQEAKVNWVTARRAILRSPLDRIGYGGYLKLALKFPDFVDYIEEV CNEFRELYEHVHSAQPMCMPFKVTILNSWGALRGWGAEMVAHALWYKQIYSYSGVLEALS GMPFDVQFISFDDILEHPKVLDDAGVIINAGDAYTAFSGGDYWKDARIVSALRKFVYEGG GFIGVGEPSAAQKEGHFFQLYDVLGVDKEVGFSLSQDKYNWEEQPHFLKEELPEALQLGE EIRNIYALPDTAVLINEHQNIRFAANTYGKGKSVYLSGLPFSFENARLLYRCLFYAAGKE TEMKKWYSENCNVEVNVYPNTNSYCVVNNTYEVQDTRIYTDHDVFDIRLQANEIRWFSIS GEE >gi|312956450|gb|AENW01000011.1| GENE 44 50034 - 50897 944 287 aa, chain + ## HITS:1 COG:STM4423 KEGG:ns NR:ns ## COG: STM4423 COG2207 # Protein_GI_number: 16767669 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 20 274 1 262 274 92 27.0 1e-18 MSIQRYQLKNRKLDKMSFHLLYISTSRYEGDWHSTPHAHHCTELFYVSSGKGSFLVNDDV FDVKADDLIIVNPNVPHTEMSRDESPLEYIVLGIEGLQFTSFTNHMEYEDYSVHNYYEFK HEILFYLKTLVQEMAQQDDDYEAVCQNLLEVLIINMVRRTKANLIVAPSQKITKECHFVE QYINNHYQEDITLELLSEKTYMNKFYLVHAFKQYKGVSPINYLIRLRVQQAKELLETTNY SIAQISDSCGFSSQSYFSQVFKKACGMTPNAYRKSSDRGKVVANDIT >gi|312956450|gb|AENW01000011.1| GENE 45 51538 - 52692 1321 384 aa, chain - ## HITS:1 COG:SA1887 KEGG:ns NR:ns ## COG: SA1887 COG1181 # Protein_GI_number: 15927658 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Staphylococcus aureus N315 # 2 369 3 356 356 226 37.0 5e-59 MKLKIAVAFGGRSVEHEISVLSAQQVMAALDEERYEILPLYIAKDGRMFCEEELRELETF QHIEEFIADHTSVALIRRDAHTYLIPSRRKLFARDKEVDLVFPVLHGTNGEDGTFQGYLK TIGIPYVGCSVLAGAIGQDKVIMKQVLQDSGLSVVPWFFWTLHQPMEQSFFKKAQRLGYP LIIKPANLGSSVGIAVAHNDVELHKSMIEAFQYDHKVVIEKVIEPLREINASVLGDEDGC RCSTLEEVVKQDEILSYDNKYSGQGKSKGMLSTSRKLPAELSDEQAEEVRTMAMDAFRAL NAAGVVRIDFLMHADSSALYVNEINTIPGSLSFYLWEKEGLSFPALLDELISLALQRVRR EQKMIFSYDTNILRDYKGIGKLMK >gi|312956450|gb|AENW01000011.1| GENE 46 52764 - 54266 1331 500 aa, chain - ## HITS:1 COG:Cj0795c KEGG:ns NR:ns ## COG: Cj0795c COG0770 # Protein_GI_number: 15792133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Campylobacter jejuni # 111 495 109 472 475 149 30.0 1e-35 MFQQNRYNKGRYQTWLVSYIRLSWKLIVKILLTLMLSYSLLLLQPTSMQEVLLLMLVAIF AYISCKMEEERVYRKPLVKTARIHRLAILLYTLYGILLCLLHYFLSAAALILVTPFLFLS AWLMVLPAAWISEPLEMAIRNHYAADAAKLLRSNNALSIVGITGSYGKTSVKTILNELLS DVYYTLMTPGSYNNQMGITLTIRNKLERLHEVFLCEMGADHVKEIHDLMQFVKPQYGVVT SVGAQHLATFGSMENILHEKMQMIECLPADGIGFVNRDNAYIRTYSIQNTCRIVWFGMSE DADYRCCDIRYSEEGTSFTVIQEGQSHRFHTKLLGKHNVVNITCAIAVAHTLGVSWEIMA LAVEKLPYVEHRLQVRKSFCTLLDDAYNSNPEGARCALEVLKQMKHQRFIITPGFLELGE QQEEEQYKLGEEIADSVDTAVLVGAVQTKSIAAGLTDSGFPKERVHVCDSFQEALAIVQK QAQLQDCVLLENDLPDAFNH >gi|312956450|gb|AENW01000011.1| GENE 47 54332 - 55042 851 236 aa, chain - ## HITS:1 COG:Cj0796c KEGG:ns NR:ns ## COG: Cj0796c COG0596 # Protein_GI_number: 15792134 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Campylobacter jejuni # 21 223 28 229 239 96 29.0 4e-20 MITIQNIKVNVTRAGNNESAVVLLHGWGQNQYMMKFLQDHLCDTFTVINLDLPGFGESEE PPRVWSVDDYVDFLQELLDHLQITHVSFIAHSFGARIALRYAYRFPVEKMVLTGAAGIQA KRGLGYHIRVKTYKLLKKLHAAPAMGSSDYQSASAIMKGVLVASVEDDLSGILKDISTET LLVWGEKDTATPLWMGRVMEEELPNAALVVLPKEDHFAYFHLSIQFCRIVDAFLRP >gi|312956450|gb|AENW01000011.1| GENE 48 55178 - 56704 1659 508 aa, chain + ## HITS:1 COG:BH3871_1 KEGG:ns NR:ns ## COG: BH3871_1 COG0665 # Protein_GI_number: 15616433 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Bacillus halodurans # 3 359 12 372 373 233 36.0 5e-61 MTESFWMKRNTKTTNYPTLQKETDAHIAIIGGGLTGITTAYYLAQAEEDAILLEADSLCF GASGRNTGKLTMQHGLLYANLIEHYDRILARQYYEANEEALNSIEAIIQEHHIACSFERC DSMLFTRDAVQVAKLQEEYQAYLDLHIPCTYIEKNDAPFPMEAGLRMQYQARFDPYAYGC ALAEIAREGGIDIYEHSPVTDMQEEEQGYRLIVNGTCVHADIVIFATQFPFIDQGHFYFT RMYCDQESIISARVKNPLPKDMMLSIDDRVQSYNTCEDTLLYAGNTYKSGQDKAMNLQEF ENTLREDFIVQEITSAWSSQDYMTFDQLPLIGKLDKHEDRVLFASGYNKWGNTTSCIAGK LLCSYALHRGSPYRMMFSPQRLSSIFSLQFVKENLNVVGAFLKSKLQKSTTAYPHIGEGT IMELDDHRYGVYRDENDELYIVDILCPHLGCTLRFNADEKTWDCPCHGSRFSYTGEIIKG PATQRLHTMHEPHNSIDPHIVNPDTADH >gi|312956450|gb|AENW01000011.1| GENE 49 56818 - 57276 330 152 aa, chain + ## HITS:1 COG:no KEGG:LCABL_25030 NR:ns ## KEGG: LCABL_25030 # Name: not_defined # Def: ABC-2 # Organism: L.casei_BL23 # Pathway: ABC transporters [PATH:lcb02010] # 10 152 116 257 257 61 33.0 9e-09 MLDSLISFGIIIVIGILIFDLPFSILTGGMIVCIILCCASCMSIGFLLGSFGIILPDINF VYNLFITLLFFLCGANLSIHLLPLPLQWLASVLPLTHGLQAMQLLIHGTWNTQVTFLMLQ EVLCMVIYAGAAYLMFRILERAAMRKATIDLY >gi|312956450|gb|AENW01000011.1| GENE 50 57555 - 57725 166 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169334544|ref|ZP_02861737.1| ## NR: gi|169334544|ref|ZP_02861737.1| hypothetical protein ANASTE_00947 [Anaerofustis stercorihominis DSM 17244] # 2 56 12 66 115 80 76.0 2e-14 MMNKQEEIEAPMKEVAEFYLKQDGVLAVHYIKRTHRQKDFNAVKEGDLPIRLTRIV >gi|312956450|gb|AENW01000011.1| GENE 51 57781 - 58209 358 142 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_0527 NR:ns ## KEGG: CDR20291_0527 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 135 1 135 137 170 74.0 2e-41 MMMKESDIETIMFAPCGMNCKVCYKHCYHKKPCDGCLKSDRGKPEHCRRCKIKDCVKARD LSYCYACSDYPCKLIKNLEKSYKKRYQASLMENSEIVKNQGLEVFMEQQKKKYTCSTCGG VISIHDKECSECQEKAFTTEKG >gi|312956450|gb|AENW01000011.1| GENE 52 58505 - 58681 87 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224541131|ref|ZP_03681670.1| ## NR: gi|224541131|ref|ZP_03681670.1| hypothetical protein CATMIT_00282 [Catenibacterium mitsuokai DSM 15897] # 2 55 17 70 360 80 75.0 2e-14 MLNELNNIFLDKVSVVVEEARKNVKTAVNIMMVYTYFEIGRMIVEEEQSGSNRAELIY >gi|312956450|gb|AENW01000011.1| GENE 53 58765 - 59334 127 189 aa, chain - ## HITS:1 COG:MA1980 KEGG:ns NR:ns ## COG: MA1980 COG0655 # Protein_GI_number: 20090828 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Methanosarcina acetivorans str.C2A # 1 102 1 102 192 80 40.0 2e-15 MQFLILLGSPRKQGNTISLVEPFVSEIKESGNNVNIIWLYDKKIKGCVACRSCQKDWTRS GCSIKDDMQEIFDAILKADKIILATPIYSWSCPAPMKAVLDRLVYGMNKYYGDEKGPTLW NGKSIAMITTCGYQPEKGADLFEESVKRYCKHSQLVYEGMLSERDLGYRSIFIDNDKKER ARAFARSLL >gi|312956450|gb|AENW01000011.1| GENE 54 59427 - 59774 185 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154499769|ref|ZP_02037807.1| ## NR: gi|154499769|ref|ZP_02037807.1| hypothetical protein BACCAP_03426 [Bacteroides capillosus ATCC 29799] # 1 100 37 136 138 112 57.0 9e-24 MKVFGFEYRSIGSIILFFIIATIISYPLGLIAGALPKALLSLDKVSMPTAITLYLILDTF ATFWGLRITDYCMQSISAEDISIFVISLIFAFLGVSDIKKSRMMKNNKSQFVERQ >gi|312956450|gb|AENW01000011.1| GENE 55 59968 - 61800 878 610 aa, chain - ## HITS:1 COG:no KEGG:Sputw3181_0345 NR:ns ## KEGG: Sputw3181_0345 # Name: not_defined # Def: hypothetical protein # Organism: Shewanella_W3-18-1 # Pathway: not_defined # 8 385 8 361 366 73 21.0 2e-11 MIKYPLNVTIDTNVFEANKFDFGIDSTMSLLVKNVQNGKIKLVLSNIVISEVEKHICRCV DSICGKARKLRKEYLDILPEQYLADIGMGIYVKIPDKKTARQSAKAVFAKFLEDCKVERL DTSNIKLEQILEDYFAVRPPFENCEKKRKEFPDAFIAQEIKNRFGIDEVVAIVSEDNGFK TACARSKNHLFFSSIGELFNELSKQEEEYAAALDLIKDNNDFIIQTINREIDDGCIEVQG LSYDQDGIVEGYDYDEIYLDHYYLSGIRIHTIDDIDGNIITASLWIHGTMDVDCYYEDFD SAFWDSEEKEYFGVETRHILEKHNARFACRIELNSKTEEIRVLPFKIILGGDSRKSRTVI DDLHEALYYKEHEDEEREALGFLPLSQYSDMLENDLNNSSMAKKIFELFKQYNDISLCYE ELAYLYDEIYTQMKADMGEDDTQAFITALSLEKSIPIDLSKKDKDDLLNVIREWVDDKID MATKKMEGNLPDCIEYGEYISILGTDCRVYTLSLDELHGTPEAGSEEQIEVSLLLDEEKL AIGYVKLIVGYLNFDEDGGASDGIEDSIDYEVDDVLEALENLISDLKEELVKEQKLAKSF KKCLKQKTNN >gi|312956450|gb|AENW01000011.1| GENE 56 62090 - 64231 2403 713 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 433 705 4 274 274 205 40.0 3e-52 MKKKHIFLTTFIALLSVMSLMICSVYRNDQIQELGRSGKQAVIWYLEDDIQEGVLGLAQS VRPKDDIIKFDTGLPNYLKSTLSNDLKEKVTKSFLELKEDANFQYYAKDLKNGREYGNKK LRDMSQKELRDSSLLYGILEYDKDGAAKILGDFSDMDFQPQSLTRYLRYFDSVDKNGPMT TYNINDEEFTQSQAMIQNPKQMKIIFRVPQEVIKDQGLIARTVYDWSNYTQFSVIAAMIG TMVLILYLLFYPIAIVEEVNPFLTFKRVKFGFLFILLATGITLGTAGVLALSGATISGTL QSVMNEYHIMMSDELLFVANVVSWMLLFLMISIALFAMKYIFVKGFWKYMKEDTILGSMI GSIHRHIDNLADIDLKDDANRKLLKFMLMQIVIMIVLCLFWWFGMFLAIIYGFALFLWLK QKLNAVQHDYRTLLKQTQELKEGNFQAELPQDVGIFNALKDEFSEIRVGFEKAVQEETKS QNMKTELISNVSHDLKTPLTGIRNYVELLQQEGISETQRKEYVSMLDQYAKRLHALMEDL FEVSKANSGNIQLDMARLDIIALVEQVQAECSELLQERGLEVIWNLHGEKQLSVLLDGSK AFRIFENLFINIHHYALEHTRVYVDIRKTANRVRIECKNISKEPLNFDTEDIVDRFVRGD KSRHDGGSGLGLAIAKSFTEAMKGSFRIETDGDLFKAVIEFPLVSDTLGENQE >gi|312956450|gb|AENW01000011.1| GENE 57 64246 - 64956 922 236 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 3 236 5 232 232 229 51.0 3e-60 MDHNILVVEDEKGIREAIQIYLKNQGYRVFLAENGQEGLNIIKRETINLAVVDIMMPVMD GITMTMEVRKDYDFPIIFLSAKSEDIDKITGLNIGADDYITKPFGSMELLARVRSQLRRY EQILMLKEHAVSSVNREEEIYSIGALELNSTTKEVRVDNQIVKLRPKEFMILELLMKHAG RVFSAQQIYEAVWNEEAINTETVMVHIRKLREKIELDPKHPRYLKVVWGIGYKIEK >gi|312956450|gb|AENW01000011.1| GENE 58 65076 - 65726 760 216 aa, chain - ## HITS:1 COG:CAC2706 KEGG:ns NR:ns ## COG: CAC2706 COG0398 # Protein_GI_number: 15895963 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 50 210 63 223 236 87 28.0 2e-17 MKKKYIVMLGGVLLLAGAGLGLLFGSIDMNQISRMLEDIPHGLREILMIVLIAAQIFLAF LPGEPLELAAGFLFGSVGGTLLCLVGSLLGTALVYLLVQRYGKRLVTVFFKQEQLNEFTG VLKKRNSMLWIFLLFLIPGTPKDIMTYVVSLSNIALGKWLLLTTVGRIPSIVTSTFLSGS LKEGNFVAAAGVAILTILLVIAGGFAYKRMKEDTAI >gi|312956450|gb|AENW01000011.1| GENE 59 66277 - 67053 864 258 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3191 NR:ns ## KEGG: EUBREC_3191 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 6 227 7 231 261 152 36.0 1e-35 MVNLIQAKEQFAAYCKGYDTQDERVALKIVHSQKVAEISKQLAIHRNCSAMDVDLAEVTG LYHDIGRFEQLKQYHTFLDAKSINHAALGVRILQEQGLLSVFCDDPHQQEVMLHAIENHN KFQIADDLEEHAFLHATILRDADKTDIFRVNLMEKAENVYLCSEEQLLQETVSEEVLQDF LNSRPILSAKRKTHLDILLSHMAFIFDYHDAYALSLVLQQHYIERMVERYPFQREQAQQA VQLAVQHALTYMQKRVTA >gi|312956450|gb|AENW01000011.1| GENE 60 67099 - 69411 1945 770 aa, chain - ## HITS:1 COG:MA0538 KEGG:ns NR:ns ## COG: MA0538 COG0826 # Protein_GI_number: 20089427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Methanosarcina acetivorans str.C2A # 7 756 5 816 855 445 34.0 1e-124 MWKTERKVELLAPAGSMEALRAAVQNGCDAVYLGGSMFGARAFANNFDEDEIQEAIAYAH VYGVRVFVTVNTLIREEEFEDCVRYVQFLYEHDVDAVIIQDLGLFSVLRQRFPDMELHAS TQMHIHNPQGIHFIESCGASRVVVPRETPLKEIRAYAALGVDLEVFVQGALCVSYSGQCL MSSLTLQRSGNRGECAQNCRMKYQLEKREDGHSEILQGKGEYLLSPKDMNTLERVPELIE AGIASFKIEGRMKRPEYVALMVALYRKAIDAYYEGRAFIYDEAVDMQMKKIFNRGFTQGH LFHHYGAQLMNPIRPNHIGVKVGKVIQVTRDKIVIRLQDTLRQQDGIRILQEPKDIGFQV NFLYKDGLLVNHGAAGDIVELDKTAPVVKGSIVLKTSDAQQLQALQKSYEAAPRKVAVYA QFTMQAGKPAVLEIMDEEGRSVRVESDAVCETARRMPLKEERIAAQLKKSGDTPFVFENI SYQLDAQGILPIRELNQMRRSALAKLEEQRKILHKQRRILAEKQPVIHSIQDAPSLCAVV HTEEQLQACLQEGLDMIFVENHSLYALMKGTEGVYPRMPRVMKEEYPASLMMIQETGGLQ AGEVFCDTSLNMTNSHTAAFLLTHGARGISFSLESSLQDCSAIKRCFQERYAVDAPFFYT VYGRAELMLSEYCPINSVICNHTDRNCGLCRQGAEYALLDVKQNRYPILCDESCRTHILH YEVRNHIDSIPEAKQHGIQHFLCTFTMEGEADCHRIITACKAQLQMKQGV >gi|312956450|gb|AENW01000011.1| GENE 61 69398 - 69856 497 152 aa, chain - ## HITS:1 COG:CAC2266 KEGG:ns NR:ns ## COG: CAC2266 COG3610 # Protein_GI_number: 15895534 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 136 1 134 152 95 38.0 2e-20 MYLINMMIASFFASLGFGVMFNIRGRKLILAGIAGSIGGAVYHAALLVGCSELTAMFLGS VALSLYSEIFARICKTPVTTFIICALIPLVPGGGMYRTMLKAIEGDVMQALSIGLDTLTI AGVLALGILVVSTIMKAVFKPERRSVRRHVEN >gi|312956450|gb|AENW01000011.1| GENE 62 69858 - 70625 924 255 aa, chain - ## HITS:1 COG:CAC2265 KEGG:ns NR:ns ## COG: CAC2265 COG2966 # Protein_GI_number: 15895533 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 254 1 254 257 196 47.0 3e-50 MNTDQLLDVASYAGKLLIESGAEIYRVEETMVRLCTSFSEVEDAQSFVTTTGIMFSITVA SKTHTKILRVHTRGVDLNCIDKINSLSRETAVQNYTIEELALKLREIENEQRYSFWIIMF FGALSAGGFAVFFGGNYLEAGCSFLIGLLIKAVSALMEQRGLHGFFTNAIAAASGALAAL GAHALCPDTDVDILIISSIMLLVPGLAITNAIRDTVSGDYLSGVARATEAFLVAIAIAAG IGVVLSMSIGLSGGM >gi|312956450|gb|AENW01000011.1| GENE 63 70824 - 71315 622 163 aa, chain + ## HITS:1 COG:CAC3306 KEGG:ns NR:ns ## COG: CAC3306 COG2077 # Protein_GI_number: 15896549 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Clostridium acetobutylicum # 1 162 1 162 164 139 41.0 3e-33 MNITFQGNPVTIKHEAVKENETLKPFTAIRNDMSEWRSEDSTGTRIFLSVPSLDTGVCSM EVAKFINYAKELKDVTVCAISMDLPFALERWCQAKNNENVITLSDYKLHSFAAATATYVE ELGLLTRAVFVVDKDNILRYVEYVREITDEPDYEAVLSCVKGI >gi|312956450|gb|AENW01000011.1| GENE 64 71881 - 72378 602 165 aa, chain + ## HITS:1 COG:CAC2876 KEGG:ns NR:ns ## COG: CAC2876 COG2131 # Protein_GI_number: 15896130 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Clostridium acetobutylicum # 4 165 2 162 162 196 61.0 2e-50 MKQERVDKINYYLDIAGTVAQRSTCRRRIYGAVIVQHDEIVSTGYVGAPRGRTNCLDLEY CIREKLRVPRGERYELCRSVHAEANAIISAQRSEMLGADMFLVGYEAVSGELIQSSNSCS MCKRMIINAGISKVYIRDTPSQYRMIDVYNDWVLQDESLDGVLGY >gi|312956450|gb|AENW01000011.1| GENE 65 72479 - 73342 1006 287 aa, chain + ## HITS:1 COG:BS_yerQ KEGG:ns NR:ns ## COG: BS_yerQ COG1597 # Protein_GI_number: 16077740 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus subtilis # 2 269 9 276 303 140 31.0 3e-33 MNPKAGKQTAKTALFTLCDRFCAMQDTIQVYVTQYAGHAQKLAKASEGCCDILVCIGGDG TWNEVISGIMEIDSKPVLAYLPSGTVNDFAATLKLPKSAGKLMDTIAQYRPFSCDIGQFN NRYFTYVAAFGIFTEISYSTPQSTKNSFGKIAYFLEGVKQLTNIPRYHVKAVIDQNEVIE DSCIFGCVTNSKFVAGFTAVNSKDAQLDDGQFELLLIRVPNNPLDVQNIIAALIKHEVNE TWMYFRKACDIRIEAREQIPWTLDGEDGGSTTLAHILNKNRAVTILV >gi|312956450|gb|AENW01000011.1| GENE 66 73354 - 73500 189 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADKKKKSTAELLEQARKAKQKPRTKALEKTLGKGKNSAKFNKVNFNG >gi|312956450|gb|AENW01000011.1| GENE 67 73502 - 74158 716 218 aa, chain - ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 6 209 5 208 216 200 51.0 2e-51 MDKDILLFDLDGTLTDPKVGITRSVAFALDKAGIHVENPDDLCAFIGPPLKDMFMELYSF DEAQALQAIADYRVYFRKQGMLENVAYPGIRELLEALQKQGKTLLVATSKPEEFACTILK HFKLDSYMLDICGATMDGTRSDKADVIAYAVQKHRLPVERCVMIGDRRHDIIGGKKNGMR TIGVLYGYGSREELKEAGADCIVEDVQSLLDVLKKGGS >gi|312956450|gb|AENW01000011.1| GENE 68 74151 - 74846 484 231 aa, chain - ## HITS:1 COG:BS_yfnB KEGG:ns NR:ns ## COG: BS_yfnB COG1011 # Protein_GI_number: 16077800 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Bacillus subtilis # 2 229 4 231 235 212 49.0 4e-55 MFTTLLFDADGTLLDFDATEKRALQRVFDLHHYPLTNEMKKRYQDINAQLWSAYEEGEIS REAVIYTRFGKLFREFGIADDGIAFEDIYQKELGRGHDMIPHAMEVVRRLYPQYRMCIVT NGVVATQYARLRDSGLDAYFHHMFVSEEIGFRKPDRSYFDHCFARLNGAKRNRTLIIGDS LSSDMQGGINAGISTCWYNPDGKKNHKQLPLTYEIRDLRELYTILEEENDG >gi|312956450|gb|AENW01000011.1| GENE 69 74857 - 76185 1293 442 aa, chain - ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 10 438 97 530 547 224 31.0 2e-58 MFTNENLKRLILPLVVEQILAVTIGMSDTIMVSSVGEAAVSGLSLVDTINILLINIFAAL ATGGAVVCSQYLGGRDRDRACVSAKQLIVSTGIFAVIIMGIVLIGCTAILQLVFTDVEPA VMWNAEIYFKISAWSYPFIALYNSGAALFRSMGNSKISMITSLFMNAFNILGNAVLIYGF HMGVAGAAISSLVSRILGSLFMLYLLRSPDNLIYIDSYRKLEFHPDMIRRILTIGIPNGL ENGMFQIGKILVQGLIAGFGTVAIAANAVANNIAQMEIIPAAAIGLAMITVVGQCVGAGD YAQARLYIKKLMKIAYISMLAVNLIILCLVPLLLNIYNLSAQTYDTALELLLYHGIFAMV LWPASFTFPNALRAAGDVRFTMCISIVSMWLCRICLSWLLGVILGLGVLGVWLAMFTDWL FRILWFYWRYQSGSWMKKRIIT >gi|312956450|gb|AENW01000011.1| GENE 70 76325 - 76711 336 128 aa, chain + ## HITS:1 COG:SMc01274 KEGG:ns NR:ns ## COG: SMc01274 COG0239 # Protein_GI_number: 15965143 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Sinorhizobium meliloti # 8 128 1 124 125 68 40.0 4e-12 MVAGAMFMKEFLFVGLGGAIGAMLRYGMSMVPVKSEFPYMTLLINFLGAVAIGILAALSM RQSLLTEHSLLLLKTGVCGGFTTFSTFSLEAVSLLEQHKTGMGITYILSSVLLCLLGVLL GKAMLHPL >gi|312956450|gb|AENW01000011.1| GENE 71 76866 - 78146 1228 426 aa, chain - ## HITS:1 COG:sll0267_6 KEGG:ns NR:ns ## COG: sll0267_6 COG2200 # Protein_GI_number: 16331091 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 170 421 2 252 253 153 33.0 8e-37 MKTDNNGTVLYNRSELQAVFSQLQPREEYSLLHFNVKKFRYFLGRYDHETGEELLQQILK TFTKGLKKGQYLLYTGGDDFIFLIHEWRKKKIIDELIQRDYEGYELKDSRFFNKVFFSMG VCRLRDFPEADFETCCLYAWLARITSKEHEKKSSDFKFFTRKQLQEFQMRSQLEVKTVEA CRKETYAVYIQPKVDAKTLKICGGEALLRWFDEDGTMIPLSLFLPVLNENSYIRYVDQMV FELVCKMIQESIQKGMKMVPISFNLSKASFEDEPFMQEYMEVFQQFDIPKEYIEFELLES ISMDNSDKLIKVVDTIHKEGFRCALDDFGSGYSSMSVLARVPIDIIKLDRSLFQNPYRDI DNFLIVDGLLDILHHFPVQIVAEGVEDETVAEHMRQHGCDMIQGFYYYRPMPMDEFQRLI AEQGEC >gi|312956450|gb|AENW01000011.1| GENE 72 78723 - 79778 815 351 aa, chain - ## HITS:1 COG:lin2698 KEGG:ns NR:ns ## COG: lin2698 COG0392 # Protein_GI_number: 16801759 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 6 351 6 351 357 110 26.0 3e-24 MQTTWKKRILQILLLLSLTAFACWFALKDDCAEVLYNIFHISWYWIVLIAVLGTAYYLLQ GIVLYRIAKPYKTDIRIWDGIHNAYIAAFFNGVTPLGGGQVAQTYAFRKLDMQYSDIASV LWKDFFLYQSTVLFYVSILLLTRFSYAMEHFQIYFFLVLLGFAINASVILILWTMARFPK LYVKISRGIVNVGFRFHIVKNKAYTLEKWQGQILYFNEEIKKLKEDRRMIVEAVLLNFLR MTIFYAIPYVAALALQVPLSLSDLINVLLMSACIHMLNALTPLPGDTGWTESAFILIFAV LFGRTEASSVMILWRVATYHIQLIAGGIIFLYVKSAGTKRQRQLPTAKSLP >gi|312956450|gb|AENW01000011.1| GENE 73 80325 - 81566 1039 413 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914961|ref|ZP_02077175.1| ## NR: gi|160914961|ref|ZP_02077175.1| hypothetical protein EUBDOL_00969 [Eubacterium dolichum DSM 3991] # 189 403 1 215 225 285 67.0 4e-75 MLLDICKEHRKRYGWLIRQKRIALGYTQKELVETLGHAVSLRSYIALENGKALQDMDIYD QLFALLDLQYNYACNPDPLLTPFLQKLFESWNAYEEEACCSCIRELLQLLSPYRQYSWES VVLKSLSILLDALKKDRLLKSEEYDWLMQFHSVLPRELESVYASILYHYQYTLPHDRNQL RNLLTIFPMLSHPDSVKNCITYALHQTNLEHNDLPAWRQLQRFRKKEEHSGNWTALFDLY HWLCLISARIHVPAFEDLHRMCEKLLQEHTIKAERRITYYFNLSGVYHNQKEYEKEEYYL CLFLKNHTRQLLPFMFWYIHNQRLQGKGIEKVLAQSYDMRDCSERLQTLWGFYELLPHAD ARTAQNYLMKRCLPLMNDLAVEFQIVFLHELQLLIPKTRNYKDLHLYMKQLQL >gi|312956450|gb|AENW01000011.1| GENE 74 81767 - 82534 819 255 aa, chain + ## HITS:1 COG:CAC0728 KEGG:ns NR:ns ## COG: CAC0728 COG0500 # Protein_GI_number: 15894015 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 2 252 18 271 272 148 34.0 8e-36 MELQELYEHFEEEKRLFHGYASQVEYLTTMHYIHQYANTQAQILEIGAGCGAYSLALAKE GYSLTAVEPVKKHVQIMESRKTRDMDITILECDAAHLPEDWNSKFDMVLCFGPLYHLSKT QEQLQAIEAACRVCKNKGILMFAYIPHDMVMATETMHVEGFLTGDEFDAKTLQLHNDPFV FHDEQSIDELFHPFPLEKLKHVAADGLAELMSERINRFTAEEFQVWMRYHLKTCEKPSFL GHSNHNLFIARKNSR >gi|312956450|gb|AENW01000011.1| GENE 75 83077 - 83943 678 288 aa, chain + ## HITS:1 COG:MA4656 KEGG:ns NR:ns ## COG: MA4656 COG0500 # Protein_GI_number: 20093435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 22 258 1 237 257 174 36.0 2e-43 MKKLFTMAMQKPALYETSKDNIWSDPHTVKRMLKAHLDTTEDSATRRIETVEKAIDWISR QFPAERYPTLLDLGCGPGIYTERFCKKGYAVTGVDFSEHSITYAMHSARQQQLSIHYLCA DYTQLHMNSRFHIITLIYCDFGVLSAMDRKKLLASVYSWLQPEGVLLFDVFLPSRYDGVP ESKTWEITEDGFWADERCLTLHDVFRYEEDNTVLNRYIAITEDDIRQFHVWEHTFTKAEL QEALQEAGFTSIAFFRDMNGNPCGDYDQTMCIAACKSRTNATDIGSDG >gi|312956450|gb|AENW01000011.1| GENE 76 84765 - 85586 750 273 aa, chain + ## HITS:1 COG:NMB1295 KEGG:ns NR:ns ## COG: NMB1295 COG0266 # Protein_GI_number: 15677162 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Neisseria meningitidis MC58 # 1 273 1 275 275 84 26.0 3e-16 MIELPEARTIAADLRKEVLGKTIQSVSGNFTDHKFTFYYGNPDTYHDRLKNKAVTAVVER SFYVELEIEDEVLTFRDGANIRWFAKPQQFKKSKLLLMFTDGSCLHVTTSMYAAIHVFPK TEGAQDAYYEAELKSCSLLDECFTYDNFLSKLHHETEKLSVKAFLATKQRFIGIGNGVCQ DILFYAGLHPKRKMNTLTKDEINTLFFSMKQTLQQMVQEGGRDSEKNIYGEKGGYHCVMS AGHYKDGCPKCGGRIQKEQYLGGSIYYCPHCQK >gi|312956450|gb|AENW01000011.1| GENE 77 85998 - 86471 372 157 aa, chain - ## HITS:1 COG:Cj1258 KEGG:ns NR:ns ## COG: Cj1258 COG0394 # Protein_GI_number: 15792582 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Campylobacter jejuni # 1 148 1 149 151 125 42.0 5e-29 MIKILFICHGNICRSTMAEYVMKDLVKKEGMQDRFYISSAGTSREEIGNGVHYGTRRKLR EEGIPVGNHRAVQMCEADYKKYDYLIGMDGANMRNMERIVHGDPKHKLYLLLDFTSRPGA IADPWYTGNFDATFTDVMEGCSGLLKYLKSQWTDENY >gi|312956450|gb|AENW01000011.1| GENE 78 86918 - 87226 380 102 aa, chain - ## HITS:1 COG:no KEGG:Cbei_3588 NR:ns ## KEGG: Cbei_3588 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 101 1 103 104 118 54.0 7e-26 MDIHNHNLNIHYSIPENLWNELVEMFAQLPHYRGFSDGCPQWYGCDGKLIEASLETSGLQ FYAELPQEEWDAWFAQFQRRAEKILGYPIGEPEDGYEFRIYD >gi|312956450|gb|AENW01000011.1| GENE 79 87274 - 87588 153 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHDSRIHETSQEHQGDEILSRSLQIVAAGGFVNRYIRPNIKRIFLIRRTDTLSYMNDSIA DVFYGSFNSFFDAETLQRYSSCGCVDILHKVGKEYEAMMKWKAL >gi|312956450|gb|AENW01000011.1| GENE 80 87658 - 89274 1411 538 aa, chain - ## HITS:1 COG:BH1900 KEGG:ns NR:ns ## COG: BH1900 COG0488 # Protein_GI_number: 15614463 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus halodurans # 1 538 2 534 538 285 32.0 2e-76 MLLELQHVIKRFHDKELLHIPVWQIHQGQRIGLIGANGCGKTTLLRILQGVCGVEEGVVR RFCTLSYFEQLSQQVSYGDGRLLRELSVSHLKQVSGGEQQRLRLSKALSTPCHLYLLDEP TSNLDQQGIAFVKKALQNMDSFVLVTHERSLLQEVCNQIIEIKDGRLHIYEGNYESYLYQ KEEHRKYLQHRYDTIEKQRHQLQKAYEQKIKQAQKAKRKPRNVSNSERKMRGKVALRKSK DGISKAMYRQADAIASRMEHLEKVEVLKEEEAIVMDVQALDLPKGKWLLKAEGLSVSYGR HNVLKNVHFFMKNHSRVALVGENGCGKTTLLQAIVQGNPAIWKAPKVKIGRLFQQFENLK DEQSVYENAMADSVQGEHVVRTILDRLLFQQQDLKKPVAVLSGGERMRLGFAKLMVGSSN LLLLDEPTNYLDLPSIRCITKLLQNYEGSVLFVSHDAAFIKEVATEVWELREHTLYMPQD CVKSCSKKQGQIDPDIVTKRMILDMRRSEVAHRLIQASGDREVLEKEYAEIMEKLKNL >gi|312956450|gb|AENW01000011.1| GENE 81 90060 - 93293 3445 1077 aa, chain + ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 456 1077 480 1086 1089 528 46.0 1e-149 MEFTNAQIRDFAGSDEQYEKAKRLVDEQRIVSLDIDDFSSREIIMINATIKDGKNYREVN MSIDKDDVTVRAHLCSCPQHGKDTLSCEHCTAVLIKLNEEHEKKQKETDAHTAVQQHDSY AISLMNAYEEQIIYSSLAMNLKQAVHIEPVLEIRQRTILALTLKVGNAKRYIVKDIAQFL DDIRHNVKKSYGKELEFLHNRLSFDEESQKLLDFMLRHEHDVLYFQNRHALERCPQARNL CMTPDALDEFFQLYAGEDIMHRMKEKMLINMRFLDENPKLTMEVKKQEDDSYEIALSSLS YRIFEGRSYVYLLMDHILYRCDTAYSKACSRLLQTYLEKKKPLLLSSELMPTFYNNVIMN TRRYIPLRGVDISAFAPLPLECRLYIDMPKHNVISARLMYCYGNEEYNAFSTSALSTSRN FNDEIATRLVFTRYMTRIDAVDGIAYIEHSQDAMYEFLNQGLKELGNTCEIFATDKFKKL QIKESVNISMGVRIESDLLEINFDTYDFPVNELQEVLASYRMNKKYYRMKNGSFVNIEDS ALQELSAILDGMHVSEKEISSGVIKVPKYRSLYIDNSLKDSDMIKVDRDSSFKDIIRGIR NVKDSDFAVPPALKSTLRNYQKTGFRWMKTMAAYGFSGILADDMGIGKTLQVITLLEDER LQCKDSLSLVVCPSSLILNWQSEIEKFSKTLTSIIISGSSDERKVQIRSCKDYDVVITSY DYLKRDIEAYEDFTFQYQIIDEAQYIKNHNTKNAISVKQIQARHRFALTGTPIENSLAEL WSIFDFLMPGYLYTYSYFKKQYEQPIVKENDMGMLKELKRMVEPFILRRVKKDVLKELPE KVENTMLIELDEETRKLYMANVSLIRDDLNKSFKEKGFANSKIMILSMLTRLRQLCCDPR LLYENYNGIGAKISACMEFIESCRESGKKVLLFSQFTSLLSLLEKELIRQDIPYYLLKGS TPKLQRQQLVNSFNSDDTPIFLISLKAGGTGLNLTSAEVVIHFDPWWNVSAQNQATDRAY RIGQHNNVQVVKLIAKDTIEEKIMQLQSLKQDLSDSIIHNNEGIITSMSKEELMNLF >gi|312956450|gb|AENW01000011.1| GENE 82 93899 - 95392 1441 497 aa, chain + ## HITS:1 COG:no KEGG:ACL_1034 NR:ns ## KEGG: ACL_1034 # Name: not_defined # Def: hypothetical protein # Organism: A.laidlawii # Pathway: not_defined # 154 465 222 544 566 139 29.0 3e-31 MKKELLFPQDCDGEQYLRRLIDAYPYDIEEARVLALLTAQPHPSPYLLEFLTYAATLSKF RLCSSEAARNPSLDTLFQNMAVLKQKDSSLLHMQPFGFDATLQLRVCEVSHPYAHLPLEQ IPFISQVQLHHVPLFQQPDAANISIERSSTFIYRDISMDANAFFAMSIAIADKKGIVYLS RECVQLGVCLAALYPLTALSLQQDFILIFALASAKDQACYYYDETNQITIGLVSGTPRMH HIRYLKDMLQTLYNAICMEKHDLPIHASMLQMQAGDTKKGLVFAGESGTGKSELLDACLR VCEQKGLSAAPVYDDHGTLHYLDEEIVSTGGEIGALKNITHSRITSVFSTFSDSLFLIQE NQELYQILPLIQHANTLQFHKVTHLFYLDNVSDEYGYRRLETLDECLDLFRKGPCRRNGQ LISSYFINPLGCAQNKPVCDALLRDFFTILYLQDIPVYVLYTRRAENNTQLYEEYTASIL REILGNDCENEDEPLYL >gi|312956450|gb|AENW01000011.1| GENE 83 95417 - 95932 548 171 aa, chain + ## HITS:1 COG:BH2541 KEGG:ns NR:ns ## COG: BH2541 COG2065 # Protein_GI_number: 15615104 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Bacillus halodurans # 3 171 2 177 180 154 51.0 7e-38 METKEIIDALQMKRSLIRISHEIIEHNRGVEDIVLIGIKTRGEILARRLADIICNVEDIS VPCFALDVSHWRDDREKPYPLPMESLPVKDKKVILVDDVLFKGRTVRAAMDAIMHYGRAR EIQLAVLVDRGHRELPIRADYIGKNIPSSLREVIRVRVSEIDGNDGVSISK >gi|312956450|gb|AENW01000011.1| GENE 84 95942 - 96964 1070 340 aa, chain + ## HITS:1 COG:CAC0690 KEGG:ns NR:ns ## COG: CAC0690 COG1363 # Protein_GI_number: 15893978 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Clostridium acetobutylicum # 9 340 10 341 343 310 48.0 2e-84 MDKTYVLDFASRLLGTDSPTGYTKKAIDLVADEAAALGYQTKRNNKGNLLIYVKGSSSEK TIGFCAHCDTLGLMVRSIKSNGMLAVTNIGGPIIPTLDGEYCRIHTRDGRVYSGTVLSCS PASHVYKDASTRKREVDEMEIRIDEVVKTKADVEALGICNGDFVAIDPKVQITESGFIKS RFLDDKISASALMGVLQHMKEHSITPAYDLIFMMSTYEEVGHGMSHIPECISELIAVDMG CIGLDLACSEQDVSICAKDSSGPYDYEMTSRLIELAKEKKLCYAVDIYPMYGSDVSAALR GGCDIRGALIGPGVHASHGMERTHYDGVENTMKLILAYIS >gi|312956450|gb|AENW01000011.1| GENE 85 97075 - 97728 782 217 aa, chain + ## HITS:1 COG:MT3963 KEGG:ns NR:ns ## COG: MT3963 COG2119 # Protein_GI_number: 15843479 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 9 166 12 170 302 99 35.0 4e-21 MLFHTFLFVFLAEMADKTQLMIMALTNRYSVKTVIAGMILGVFAISGVSVLAGDLIGDLI PMRLIKLAASAMFLFFGLMNLRCNTEEEAGHHVALKIPVISIAFTFVIAELGDKTQLATV ALAADHMREHFPIFLGASLGLIMANILGIFAGKLIFSHLREDTVKVGSSFIFFLFGSLTL FEAVPGNNLIFIGYSTVLMVCAYAIYTFSRRHVGTHG >gi|312956450|gb|AENW01000011.1| GENE 86 97955 - 99706 2208 583 aa, chain + ## HITS:1 COG:DR2055 KEGG:ns NR:ns ## COG: DR2055 COG1164 # Protein_GI_number: 15807049 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Deinococcus radiodurans # 122 578 7 462 467 332 38.0 9e-91 MNEWSLDVLYKGYYDEAFVNDFKKMDTVIQRCTQAAEQLCHDNEVKALHDMLSLLEEFHT LADRVGHFISLKQSTNTSDGKTVSLMNQFSQKFSGITKANARFNRYVAEIEDLDACIEQD ALLKEYSYLLHTIKEDSTYLLSDDVEDVLSKMNISGGEAWANLQEYLTSIVEVEYKGEVS TLSQIRNMAYDSDAKVRKSAYEAELKAYDKIRDAVAFSLNSIKAQVLTECELRGFASPLA MTLHNAHMKQETLDALLHTMQSYMPKFHAYLRRKAELLGYKNGLPWYELFAPLGEETKTY RIEEAKEYLLKHFRPFAEDMADMMERAFDESWIDFFPRKGKVGGAFCANLSGVKQSRVLT NYDGALGDIVTLAHELGHAYHGMMIENHRPLNTDYSMPVAETASTFNENIIMNAAIEEAK GQEKITLIENQLQDLTQVICDIYSRFLFEKTVFEKRKDSFMFADELEAIMIETQKQAYGD GLDPDYLHPYMWICKSHYYSSGLSFYNFPYAFGALFARGLIVKYQEEKEAFVPKYRELLK ATTVSSVEDVAAMADIDLCDEAFWTSCLDTCAQRIDEFLELTK >gi|312956450|gb|AENW01000011.1| GENE 87 100055 - 101569 1547 504 aa, chain - ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 1 502 1 518 530 164 26.0 3e-40 MYKIMIIEDEQIERETLYKIIQEGFPECQELYAAKNGKEALTLFEEHHPDIILADINIPG INGLEVIRRIRQTAGEVEFLILSSYNYFEYAQEAIRLGVEDFILKPYTIDHLKDALRKTM EQLQQKQNEKKHQSDLLEKIERITPVVENECLFAILSNEDELVLRKNLRLLSPRICSGFC FIIRSSHYDQTYMEKVSAGFIQLGFRCLKELFHELQIFYILAERAIPQEDLQHLESYITA LQSDSLEFGIGPIVNDIALFHHSFQIARDRIGIQEPICSQLLQDSSDDCRVDIDLDKIVA RFVSIFQKMDEEGLKRAVHQLCLTLIPHERRQIVQEVADLFERLRDTLQKEYADIDLQRI EIAPLQISTNIHQEVPLYLHMQMHRLYDPIVEERFRNTNQLVRQAVRYIDANYRKQITLS DMADALQVSPFYLSKLLNNSLHKTFTELVSERRVEASKELLKSGKRIKEIAYEVGFQGQN YFTKIFKKYTGVTPKMYKNSFDDK >gi|312956450|gb|AENW01000011.1| GENE 88 101562 - 103037 1592 491 aa, chain - ## HITS:1 COG:BH3841 KEGG:ns NR:ns ## COG: BH3841 COG2972 # Protein_GI_number: 15616403 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 9 487 5 477 481 163 26.0 9e-40 MWNRSKSFRSKIMNYNLMLIVVMVLVCTTYVLINDRTIKKFNSTYTTYNELNQFYDNLKN LNDALQVYLYSPDDQNYKDFHRYRTVLQGNVEKVKASLKNQDHVWRFELLNNMVDGYMAQ AELVIASDLQQEKEFSAKYQELLYEYDLINKTASEYYGLATQDMQLQKAAVNSNQKTMQL VSLFFILYLIVWMIYFSISTIKSITDPLEKVINNMNRIKKGAYDLTQISNTNKEMNVLCL ALEDMADSIEKNIQYENEKARLERRVLEQQNDNLRKDELLAQSELRILQNQINPHFLFNT LNMIYKKAYSEGAYETSELMEKTSQLLRYGLDNASKISSLKKEIKAIYNYNYIQEKRYGD RIRFLMDIEEDLPDIPMPSMVLQPLVENAVSHGLQDIIEDGEVVIEVSRLNDEIMISVSD NGTGMPADELEKLILNDFRMSSDERSHLGLYNVTRRLKAFYGDGVRIIVNSLEECGFEIN IQIDLKENGYV >gi|312956450|gb|AENW01000011.1| GENE 89 103027 - 104019 948 330 aa, chain - ## HITS:1 COG:BH3448 KEGG:ns NR:ns ## COG: BH3448 COG1879 # Protein_GI_number: 15616010 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 38 289 42 293 335 63 22.0 6e-10 MRAGMRMRKKRLCGIVCLCLVLSGGCSAAEPKEEKKSSQYFLFATPLSTHTLWQKAREGM QDACTELEVHCDWKGPIKISTDDMVDVINTGLLKKADGIITQGVISKELIQKGNDKGIPF VLVDSPVEGSSPLTTISKDFDEQARLLLADIEEKLGKNKMLRIGIQVSDLSFDLARDQIA SIEAVFAQHPGGFEIVAKSESRSDQLTSRNEWIKVLQKDTGMNVSINLAGENAIGFVDAS EYMDNRDTILVYGVDDMKETLELIREGKVEGSIVTSFYQYGYESVHILYDYVTRGVRPEK ERIPSYLVLVNRKNLNTYASALQKEKMHVE >gi|312956450|gb|AENW01000011.1| GENE 90 104308 - 105876 1553 522 aa, chain - ## HITS:1 COG:yaiC_2 KEGG:ns NR:ns ## COG: yaiC_2 COG2199 # Protein_GI_number: 16128370 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 352 513 1 165 171 96 37.0 1e-19 MKTDKLESLYTHIEEKRVLRDFEGIFHYASLLYTASREQNNDHYLIISCYFLGSSYFNTG VYDKAMKYLQEGIRIGEHAPYPFFQMMCYNLAGMVSGTLGDDIMSVEYMLKSYYIALDHQ ELGYLYIILNNLGVLFFNLGYYEIAKEYFTNAFEERGIGSYNDLKINDGFNIINLMGTSI YLKDDLEYERWLIWYREFQKRFQIVTVENDYQMYQVLLCAHTQDIARLRAEVVRFLEIAG REEDRLHTFKNLLKVFKVCMQFQEQKLSSQILYELQLILQDYPNYQNHSELKECQVIYAN TFKAEQERLQALEEYYDIRQLELSAAHNNMKNTLLLKIDMEQLLYERNQILKENRELERR SEIEEFTNVMNKTAFRTHVSAELETMHQDQYVCLLVIDIDKFKSINDTFGHLVGDQVLLH VVKVLKEVLRSSDFIGRIGGDEFCVFMKNILSLPYLYERLDEILDRLVNTRIEDRQVLSA SIGVCMSNHICRYDEIFQKADEAMYHAKHAGGNCYDITELST >gi|312956450|gb|AENW01000011.1| GENE 91 106097 - 107797 1948 566 aa, chain - ## HITS:1 COG:lin1002 KEGG:ns NR:ns ## COG: lin1002 COG1080 # Protein_GI_number: 16800071 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Listeria innocua # 2 563 5 568 572 667 62.0 0 MLKGIAASAGIAIAKVYKLETPSFEIVKTEATPAEEVAKFNAALEKTKSDIEGIKERAAK RLAPEELAVFDAHLMMAGDPELASQIISMIENDKVNAEFATNEVANMMVAMFESMDNEYF KERAADVKDVTFRLKCNLLGLTIPDLSAINEDSVIIAHDLTPSDTAQLNEYAKGFATNIG GKTSHSAIMANSLEIPAVVGCSGVLDAASNGDTVILDALDGVVILNPTAEEIKEYEGKRA AYMEEKEALKVLKDAKSITTDGHEVELAGNIGTPDDVEGVLNNGGEGIGLYRTEFLYMHS DHFPTEDEQFEAYKAVLEGMGGRRVVVRTLDIGGDKKLPYFTFDPEMNPFLGYRAIRLCL DRTEIFRTQLRALIRASVYGRLCIMFPMIATVDEFRQGKAIFEEEREKLIAEGVKVADKI EVGMMVEIPAAAVNADNFAKEADFFSIGTNDLIQYSMAADRMNEKVSYLYQPYNPSILRL IKMTIDGAHKEGKWAGMCGAMAGEEYAVPVLLGLGLDEFSMSATQILKARKMVTNLSKKE MEGLAEEALKQATAEDVLALVKKAVE >gi|312956450|gb|AENW01000011.1| GENE 92 108114 - 108308 208 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFINKPKFKDLLKKKEVREGKEANLEKGDFLALIMAAFSVFVPVILLFCAVLGIFIWLFL LYIH >gi|312956450|gb|AENW01000011.1| GENE 93 108308 - 109291 899 327 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 321 6 324 329 350 52 2e-95 MEDKKVILEVKDLKKYFPLGKGKLDKNKKYVKAVDGVSFKLYEGETLGLVGESGCGKSTL GRAILRLHEPTSGEVHFNGEDILKKNRKEMRKLREEMQIIFQDPYSSLNPRMNVYNILSE PLVAHGYYKKGDELKQYILNLMEKCGLPPYYCYRYPHQFSGGQRQRIGIARSLALDPSFI VCDEPVSALDVSIQSQIINLMMDMQEERKISYIFISHDLSVVKHISNRVGVMYLGSLVEL ADKDEIYENPQHPYTKALMAAIPKPDPTQRSSMEAIHGEIPSNVNVPSGCKFHPRCPYAK DICKTQEPAAKEIKPGHVVLCHFGGEF >gi|312956450|gb|AENW01000011.1| GENE 94 109295 - 110293 635 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 6 326 8 328 329 249 41 8e-65 MEQVKNKKILDVENLKVYFYTKKGVSKAVDGNNFKMYENETLAIVGESGCGKSVTAMSIL GLVDEPGKIGEDSKIMYGDKNLATLKDDEIRKIRGNDISMIFQEPMTSLNPVFTVGNQIM ENILLHEDVKKEEAHERAVKLLDMVGISRPEKVVDNYPHQLSGGMRQRVMIAMALACNPK LLIADEPTTALDVTIQAQILKLMNDLKEKTGTSIMLITHDLGVVAQMADHVNVMYAGKVV ESAPVFEIFKNPKHPYTVGLMSSMPSLNSGSKRLSTIEGNVPNPINLPKGCYFADRCPKA MPKCRESQPHDVKVGSRHHVSCFLFDDVKGEE >gi|312956450|gb|AENW01000011.1| GENE 95 110306 - 111220 1108 304 aa, chain - ## HITS:1 COG:CAC0178 KEGG:ns NR:ns ## COG: CAC0178 COG1173 # Protein_GI_number: 15893471 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 13 301 8 298 301 275 46.0 6e-74 MAKENVNQTEIKLDKSDTMGPWQIAWNKFRQNKIAMAGLIIFILIVLAVIFVPIISGVNV NDYSFDTKNIGPNAEHWLGTDQQGRDVFFRLFLGGRISIMVGIIAALITVLLGCVIGGIS GYYGGWIDNLLMRFAEIVYSLPFTPLILVLAYNMLWTPSNVKMYIVSFLIGVLSWPGLAR LVRGQILSLREQEFMQACEALGLSDFSKIFKHLIPNVLSMIIVNATLSMASAILTEAGLS FLGMGVTAPTPSWGNLMELARNTEVFQDFPWNWLPAGIMCLLTVISINLIGEGLRDAFDP KDIR >gi|312956450|gb|AENW01000011.1| GENE 96 111232 - 112212 810 326 aa, chain - ## HITS:1 COG:CAC0177 KEGG:ns NR:ns ## COG: CAC0177 COG0601 # Protein_GI_number: 15893470 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 326 1 321 322 296 46.0 3e-80 MLKYIVKRLLNLIPVIFIISIVIFGTVKGMPGDPVDAYLGMGSKATPEQKQQIREELGLD KSLPEQYVIWVGNLAKGELGTSTKFKLPVSEIIGDYVWNTFLLNLVSLVIGIGLSIPIGI KQATKKFSKFDNFWTVFSLLGVSVPTFFFALILIFFVALPSGVIPVNGMRTPDLAVFGYD NIFQEIGDVALHMLLPTIVLAFGNFATFSRYVRSSMIDVINQDYVRTARAKGLKEKTVIY RHAFKNALIPLVTLLGLYIPSLFSGAMILESVFLWPGLGKILIEAISGQDQSIITACLMF SAILMVLGNLLSDILYSVVDPRVKVE >gi|312956450|gb|AENW01000011.1| GENE 97 112327 - 114027 1619 566 aa, chain - ## HITS:1 COG:CAC0176 KEGG:ns NR:ns ## COG: CAC0176 COG0747 # Protein_GI_number: 15893469 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 23 566 57 569 569 211 29.0 3e-54 MKKLFKVMAAAACALSLTACGGSSKKSDTLVVGAEELTGTFSPLYYTGAYDGYVIDLVYN KLMEYDVDGNLQPSLAEKTDVAKDGKTITFNLRKGVKFSDGSDFTAKDVEFSYKVVSDPS YTGRFISTCQYLEGYKQYNNKKNKEEPDYPGIEVKDDYTVVFHFTEARNDNLQSLMNISV ISSNQFKDSYAYKKTKPIQDAVGKPIGTGPYVLDKWEAGTGASLKKNEKYWGDDYKGIAN VIIKPVKMETEYQELKSGNIDLLAGQIEPKKIGPASNNEDLTINHYPRGGMGYITYNTVN GATSEKEVRQALSYAFDRQSFVNSYYECKDCKDLDGVEIGYVPTTWNNPISKLGKVITGE EKVDGLTNYSYDIEKAKKLLDDAGWKVGASGFREKDGQKLEIKIMAIKDHDILNNLIPMW KKAWGEELKADVKVATVDFNTLMDKVYYDKNIEEWNVYFMATSFTDDTMSGAVTNFDSKY VGDGLDNTSRLKDEKLDSLMDAALTEMDMDKAKDKWVEAQKQVNEDVSALPVYGNTYFDF YNKKIKNLKTSALYQWTHGLRDATIE >gi|312956450|gb|AENW01000011.1| GENE 98 114322 - 115527 1174 401 aa, chain - ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 5 395 17 412 427 197 35.0 4e-50 MANCLVAQSGGPTTVINASLAGVVRANQLNPVYDHVYGGLNGIEGILEDRLYDLTNMSEY ENRLLRQTPSSALGSCRYKLKRNDETDYRKLVEIMDKHDIEILFYIGGNDSMDTVDALSQ WAKANNIDKRFVGIPKTVDNDLMVTDHCPGFASGAKFANEVVNATWLDYNVYTREEVFIL ETMGRDAGWLAGSTVVTGRVDLIVLPEVDFDKEKFLAQVKKCMDEKGKCYIVTSEGAHYA DGTYIAAGEAVNDGFGHAVLGGAGENLKNMILEAGIAPRAKVQDLSTAARSSNFAQSLVD VTEAFELGMSAHSRSADGKFTGHVVAVQREYVDGRYNAKFISGPAENFANHVKHVPVEWI LPDYQGLTQEFYDYITPLIQGEPTLIMENGIPKTIVPFNKR >gi|312956450|gb|AENW01000011.1| GENE 99 115600 - 115950 565 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKTIQDNILAHCMELALMPALLYSYRDGGVLYWIVLILMDDYILKHQDVKGLLPLWGDA RYKKDIRLLLILEGCMLAGIVIIAFKNWQVSAILLVNDLILDFIGIFGQYNTKKNK >gi|312956450|gb|AENW01000011.1| GENE 100 116011 - 117429 1785 472 aa, chain - ## HITS:1 COG:no KEGG:CLH_2311 NR:ns ## KEGG: CLH_2311 # Name: not_defined # Def: stage V sporulation protein AF # Organism: C.botulinum_E3 # Pathway: not_defined # 12 465 14 467 467 441 47.0 1e-122 MKKEYEKLNTRLKEQMQTDLNFDIVVKPLLVQGIHMSLYFVDGFAKDEILEKMMEFLLKA DIKECVETQDIQTFCDSWLSYLEVDVQPDFAAMITSVLSGSVLMIVEGYEEGIVIDARTY PTRSMQEPEDDKVLRGSRDGFVETLIFNTALIRRRIRDTHLRMEYHTLGSMSKSDIVLCY MDGLADQDLLDDIRRKLSEIHVEALTMAQESLAEALVPHKWLNPFPKVRYTERPDAASSN ILEGKVILMIDNSPSVLILPTSFFDFIQEAQDYYLPPITGSYLRIVRILVFFLTLLVTPI WYYLNCNPQLTPDWLSFAMIQDHMNLPIIVQFLVLEFGIDALKMASLNTPSSLNSSFSII GALILGDFAVNAGWLAPEIILYMAFVALANFTQPSYELGYAIKFMRVMLLVLTAISPVWG FWLGIALMLIIMASNRTVTNTSYFYPLFPFNPHDFKMIFARKKLRGKSSSRS >gi|312956450|gb|AENW01000011.1| GENE 101 117563 - 118480 743 305 aa, chain - ## HITS:1 COG:lin2138 KEGG:ns NR:ns ## COG: lin2138 COG0206 # Protein_GI_number: 16801204 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Listeria innocua # 22 305 30 314 392 212 42.0 6e-55 MGKVTIKIFGIGDGGNTIIRHMLQHRLHGVEYIAVNTNRLALLQLSQEHKLLIGEKQTKG YGTGADSLLGKRAAIEAKEEICKRMKGADMILLCAGLGGGTGSGALPVFAQLARELHALT IAFVTLPFPFEGKKRMRTAMASMEEIYSYTDTCITLSNRHILQHLGNAPITSAFSTANSI IQQGIQALYELITIPVYINVDYADICTTMEKQKHGFIGVGYGSGNRKGEDAVKEALSASL LEHDIRGLHHAIVHIFGNSELTLEEVQQIVNFIHTEAGGALDIIFGMAINDSLKDEVIVT ILAAG >gi|312956450|gb|AENW01000011.1| GENE 102 118854 - 119852 1258 332 aa, chain - ## HITS:1 COG:lin2614 KEGG:ns NR:ns ## COG: lin2614 COG1902 # Protein_GI_number: 16801676 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 2 314 3 324 338 223 37.0 5e-58 MKVFEKNKLGHMELSNRIGVPAMCTYMVKTKDGVGNLHHVAHYDTLAKGRPAFIVQEATA VNAHGYINDECLGIFTPRQRQILKEIVDCVHAYGVNIGIQLNHAGMKNTFGNQKYGPMEQ GDVISLDEDGINELIVNFEFASRWARELGYDFVEVHAAHGYLINQFLSPLTNQRSDAYGQ DRTLLLRRIVEGCRDNFEGDIVVRISAEEYEAGGLHPEDMKSTVQVIEEAGAAAISVSSG GLNTGAVHAYPLYQIPYAETIRTMTTLPVMGVGCITKESEISQILQEERCDYVLLGRKLL RDPFFLLKWQDELGLLREEEIGQCLYRGIHMK >gi|312956450|gb|AENW01000011.1| GENE 103 119869 - 121725 2397 618 aa, chain - ## HITS:1 COG:BS_ydiF KEGG:ns NR:ns ## COG: BS_ydiF COG0488 # Protein_GI_number: 16077662 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 613 2 638 642 461 41.0 1e-129 MKYQIHKGSKYYGATTVFENIQFEIRNTEKIAIVGRNGCGKTTLLRVIAETEVLDAGEIH KENKLRIGYLAQTTFTDENVIVEEEMEQAFEQVKAVGKRLEELSEKMCSDHSEAVLNAYA DVQQRFEELGGYTYRSEMMTIFTKFGFQEEDLKRPISTFSGGQKTRLAFVKLLLSKPDVL LLDEPTNHLDIDTIEWLEGYVKRYPKAVVLVSHDRMFLDDVVDVVYEIEYGVMRRYPGNY SNYVNVKKSDLEQQKSAYIRQQKEIQRMEELIEKFRYKKNKAAFAQSKIKYLDRMERIED PKSNEKSFNARFVPNVKGGKRVLEVQDLTIGYDQPLCTVNLEVMQSAKIAVIGPNGKGKS TFMKTLMKQVEPLSGSFLLGHQIEVGYFDQELAQFNSANTVLEEVWNDFPDLNRTEVRTA LGCFLFTGEEVFKTVDCLSGGEKVRLSFVKLMLSHPNFLLMDEPTNHLDLIGKEALEESL KDYEGTMLFVSHDRYFISKLATAILVIDDGKASYYPLTYEEYMNRDKAQPVEKKQQPEKK ESAKPERYINYGKEISKLEKKIAVKEEELEALRELRFEPEYYHDYHKMQELDEKIDLIHN EIENLMQKWEEYSEKVEN >gi|312956450|gb|AENW01000011.1| GENE 104 121759 - 123051 1532 430 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401324|ref|ZP_06645468.1| ## NR: gi|293401324|ref|ZP_06645468.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 428 1 432 437 460 54.0 1e-128 MAYAPRQRKYKVRWKIAVPLILLVALVLYAVAGLLFPQKKEEAKKFTVCGLNSEETIHLL NKKAADTLTVRDYVFYGESLGLYTQTYDAKGDKDELAGKTVELHNLCTDETIPMTMDSTA DQKITLEDLNPGYYEITVIDNLVKKRVIFDRTLHSDTFTTVQRKGNVNAIKLIADQDLLK DYDSKLDQNYLFLSVEKAKPKEGDIDVLLDPYGMNMDLTYVPDEGNKGNGITEYKETYKA AVWMKEELEQHGLRVEITKSDASEQPKPAYGKDGRLADGYQKHARYYIYLRFNTNPDENV SGMEIWHSAYSSPTLGKNIMYGLEKKLKMSGSAYTDANNPGVGASPLISGGYDMYSNIRE AGGRATMAGKGSENARKENQTFVDADGMQGLEIDFAYVSNKEDAAYWLKNGEKISKQAAA SFASGINASK >gi|312956450|gb|AENW01000011.1| GENE 105 123069 - 123905 805 278 aa, chain - ## HITS:1 COG:SP1273 KEGG:ns NR:ns ## COG: SP1273 COG3475 # Protein_GI_number: 15901133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 15 263 4 258 267 95 29.0 1e-19 MKEYILKTRKDGTSITVRDVQLVLLEMLKDIDALCKKHNIRYWLTGGSALGAVRHKGFIP WDDDADIGMLREDYEKFQRVVHELGDAYITQCFETHREYNVLVPPMKVRKKGTYCVEYNA LLKNKCRDSDGLFIDIFVLDHVSENKAKDFIWRVRNGILMVLIVFFENLHCNPLLLKRRF VRNAKKYGQINKNTAWIGYDLTWTFNSFFHPVVYSLESVFPIQYVEFEDTMLPVPKRPKD MLDVEVSTQHMSYPPLKDQAPKHIKDIELQASLIDDIR >gi|312956450|gb|AENW01000011.1| GENE 106 124291 - 125235 850 314 aa, chain + ## HITS:1 COG:no KEGG:WPa_0291 NR:ns ## KEGG: WPa_0291 # Name: not_defined # Def: hypothetical protein # Organism: W.pipientis # Pathway: not_defined # 8 270 7 292 310 68 28.0 3e-10 MSNTMHQLNYSNDLFFKYTLSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIIGK KRIILDVHVKDEQNRHFNIEMQTTCRGIAEMMRFEFYGARALNNQLKSGEFYDQLKPVYQ IIFIDEYAWNNRNLINHYQMRNEQGEDESGYPLILRTFVHMPAINDIVKEKEMQRLNDFE QLVYLFENNEKNDILKSKERLVRVFMNKYEEMQKDDELWSTAMAIQMGEARYRNGLRDSF EEGKAAGKMEGKIEGKLEGERQLLHKLIEIKYHEDCVTWLQALTEEQMHIVSTLLLECDT FESLKKQLHNADMK >gi|312956450|gb|AENW01000011.1| GENE 107 125429 - 125608 125 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKNDILKSKERLVKVFLPKGFHVSKYEEIQKNDELWSTAMAMQLEEARYRYDLEDCSE >gi|312956450|gb|AENW01000011.1| GENE 108 126081 - 126413 384 110 aa, chain + ## HITS:1 COG:no KEGG:DSY2751 NR:ns ## KEGG: DSY2751 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 94 7 100 110 73 40.0 3e-12 MNYLEKLKLLMKQHGLNENQLAKKANVPQSTINSLFQKNNLPTISTLEALLEALDMTLSE FFYDDALMKKHQLEEQNLMSKWNFMTSEQKNGVLILIDLLLNTRSNRANG >gi|312956450|gb|AENW01000011.1| GENE 109 126823 - 127146 357 107 aa, chain + ## HITS:1 COG:no KEGG:DSY2751 NR:ns ## KEGG: DSY2751 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 103 7 109 110 77 39.0 2e-13 MDYLEKLKVLMKQHNLTEYKLAQKADVAQSTINSLFRKNNLPTISTLESLLTAMDMTLSE FFYDESLMKKHELEEQNLLKKWGLLTNEQKKPILQLIDLLLNNGSKN >gi|312956450|gb|AENW01000011.1| GENE 110 127202 - 127789 698 195 aa, chain - ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 5 163 4 162 187 160 50.0 1e-39 MKTIRFAQLSDAPALLSIYAHYVENSVITFEYDVPSLEEFEGRMMKIQREYPYLVCELDQ NIVGYAYAHRHMERAAYQWNVEVSIYLLPQVQRRQIGTALYTALLEILKLQGLQTAISCI TLPNDASLALHKSFGFTEIGVLRNAGYKFDAWRDVIWLQKALHEHPVPVQEWISIERLDY IRIMEIFHTTCMIII >gi|312956450|gb|AENW01000011.1| GENE 111 127876 - 129258 1868 460 aa, chain - ## HITS:1 COG:CAC3260 KEGG:ns NR:ns ## COG: CAC3260 COG0017 # Protein_GI_number: 15896505 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 28 454 21 457 463 567 60.0 1e-161 MFEFMTIRELYEIVMSGSHVEQDSMEYVQLQGWVRTNRCSGKLGFIELNDGTYFRNAQLV YLQELKNFAEVEKYPTGAAITVTGKFVLTPQGKQPFEIQVTEASLEGDCDRDYPLQKKRH SFEYLREIAHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEM FKATTRDDADYEQDFFGKEAFLTVTGQLHVEAFAMAFRDVYTFGPAFRAENSNTSRHASE FWMIEPEIAFADLEDDMNLIEDMVKYCIDYVLENAPEEMKFFNTMIDKSCIERITKVRNS DFKRMTYTEAIDLLLQADVKFDNKVEWGMDLNSEHERYICEKIVDGPVFLTDYPKEIKAF YMRVNDDGKTVAACDLLVPGVGELVGGSQREERYDVLEARMKDMGMTTDSLQWYMDLRRY GGCKHAGFGLGFDRLLMYLTGMQNIRDVEPFPRTPKNLLF >gi|312956450|gb|AENW01000011.1| GENE 112 129275 - 129448 79 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHTDLYLNGCGAEPENNSRRFRVGTIYPEEDAHAANAWESGWHRVQYVPERERFFVP >gi|312956450|gb|AENW01000011.1| GENE 113 129503 - 130132 782 209 aa, chain - ## HITS:1 COG:BS_ydiH KEGG:ns NR:ns ## COG: BS_ydiH COG2344 # Protein_GI_number: 16077664 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Bacillus subtilis # 3 200 5 203 215 154 38.0 1e-37 MTEKNVPKATLQRYPVYLKALRKLKSSGVERIMSKELASVVNIEPTTIRRDFSFLGNLGK QGYGYDVNRLIEIFNQQLGMDFDEKIILVGAGNMGRALMKYNKWDYVVGEIACAFDVNPD RQGVRFGIPVYDIADLEKKVPDGCRIAILAISENIQQTVDRLIACGITGLVDFTHEHIQI PKGVVLKSVDVVSSIQELVFETNNLNVER >gi|312956450|gb|AENW01000011.1| GENE 114 130639 - 131067 438 142 aa, chain - ## HITS:1 COG:SA0906 KEGG:ns NR:ns ## COG: SA0906 COG0454 # Protein_GI_number: 15926640 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 15 142 12 140 144 73 32.0 7e-14 MGANMIEIKTKDNEQDYRYVRIEVFMKEQGFQNEFDEIDATAVHITVYVDGTLAGCARCF PKEEEAAWVFGRIAVLPQFRHQGLGGVLLSEMESIVHSKKGRRCILDAQCRACAFYESYG YTICGEEHMDEHVPHVQMEKLL >gi|312956450|gb|AENW01000011.1| GENE 115 131105 - 131296 270 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402399|ref|ZP_06646536.1| ## NR: gi|293402399|ref|ZP_06646536.1| hypothetical protein HMPREF0863_02677 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 63 4 66 66 80 73.0 3e-14 MKNIILVKYLDDDTKARRIETALAETRVDFQVNLEKQCVIVEGNSDMVAVARKVINDLGF MII >gi|312956450|gb|AENW01000011.1| GENE 116 131380 - 132102 702 240 aa, chain - ## HITS:1 COG:BH2400 KEGG:ns NR:ns ## COG: BH2400 COG0527 # Protein_GI_number: 15614963 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Bacillus halodurans # 1 238 1 243 411 169 40.0 4e-42 MNMKVMKFGGTSLRSEATRKYVYRHVLESSKTNKVIVVVSAMGRYPDAYATDTLLSMGSE FLTRQEKARLVSMGEQLSALKICSELLDMGIRAYALPFFDCGILTDENYDYAKVLKLDHT GIRKKLNSYDVLVVGGFIGISPSGHVTTLGRGGSDYSAVLFADMLDLKEVDIYTDVDGVY DKDPKLNEYAIKYDKLTYDEMLNMKSRVLHDRCVNYAKDHHIRIYLKGTFSTSLGTIVED >gi|312956450|gb|AENW01000011.1| GENE 117 132304 - 132978 827 224 aa, chain - ## HITS:1 COG:SA0307 KEGG:ns NR:ns ## COG: SA0307 COG3010 # Protein_GI_number: 15926020 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Staphylococcus aureus N315 # 10 223 5 221 222 231 55.0 6e-61 MNMLEQIKGGLVVSCQALPDEPLHSSFIMGRMALAAKQGGAVGIRAQSKEDIIEIKKVVD LPVIGIVKRSYPDSDIYITATKKELDELFETGCEMIAMDATLRDRPNGEKLEDLVNYVHE HGVLAMADCSTYEECVNAENIGFDCVSTTLCGYTPYSKNVDGPNLELFKKLAETIKAPIL AEGKINTPEDLAAVYEAGAYSAVVGGAITRPKQITERFVKALKK >gi|312956450|gb|AENW01000011.1| GENE 118 133195 - 133764 676 189 aa, chain - ## HITS:1 COG:L181238 KEGG:ns NR:ns ## COG: L181238 COG0494 # Protein_GI_number: 15673901 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Lactococcus lactis # 10 181 12 182 186 142 41.0 3e-34 MKLYEELCAYTPCNLQEEADRKVMMRYIKEFPNVYTRDNVYGHITSSPWIINADASKVLM IYHNIYNSWGWCGGHADGDRDLIHVALKEGREETGLKKLELLSESILAIDILPVPPHVKR GAFVSSHVHLNVTYLCQADERDTLCSKPDENSGVRWIAVEEIDHYVTEEDMKPVYRKLVE KSRSLLLAG >gi|312956450|gb|AENW01000011.1| GENE 119 133764 - 134822 518 352 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 10 313 11 312 378 204 36 3e-51 MKLQHDKKKFTEQLLDWYDQNARVLPWREDASPYRVWVSEIMLQQTRVEAVKPYFERFIQ ALPSLKALAEADEDTLRKLWEGLGYYNRVRNMKKCAMECMERHNGVLPDTYEELLKLPGI GAYTAGAIASIAYKRCVPAVDGNVLRVFSRVLVSEDDILKERTKKKFQDIIQEYIPEHRS DAFNQALMEIGALVCVPNAAPRCNICPLASECMGYQSGAAHRLPNKTAKKDRRIEKKTVL VLLCKDRVYLHKRDEQGLLAGLYEFMMLDEQKSRKEITQEFQDQLLRLVPLRKAKHIFSH VEWHMNGYLLELKQEAVEGVWCTKDELQKTYAIPTALKVYREALLTWIGGDS >gi|312956450|gb|AENW01000011.1| GENE 120 135269 - 136177 834 302 aa, chain - ## HITS:1 COG:lin2649 KEGG:ns NR:ns ## COG: lin2649 COG2177 # Protein_GI_number: 16801711 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Listeria innocua # 5 298 3 292 294 192 35.0 8e-49 MKKLYRYIKFHLKMTYKNIVRHFGLTFSASVAVSITLILISVFMLLTNNLNSFTKHIEQQ VTIRASIDTIVKDKQKQQLLHAIEQLNTVKHVTLSTGKEELENYKAEFQDDSTMFDMYEG KANPIRDTFLIEVKNGKDIQKTADKIENMKGIVSAEYGGDSTSGMISTFEKIREGGMIFI IFLIVIAVFLISNKIKMSIYTRKQEIAIMRFVGASNWAIKFPMMLEGVFIGILGSLVPVL LTIFGYQYVYTILGGTFMSNMFVLQTVFPMTLEISGILILIGVLVGLVGSFFSTTRYLHW KR >gi|312956450|gb|AENW01000011.1| GENE 121 136454 - 137041 483 195 aa, chain - ## HITS:1 COG:CAC0211 KEGG:ns NR:ns ## COG: CAC0211 COG1268 # Protein_GI_number: 15893504 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 9 174 8 172 184 113 42.0 2e-25 MKQMTAVRMALCSLFTALIAIGAFLQIPLPNFDYFTLQFFFVLMAGMLLGARLGALSAAL YVLIGLLGIPVFAAGGGISYVLRPSFGFLLGFIVTAFCSGWIMQHGQRKWKTCFLAVLAG LLATYGIGLAYKYVILNYYTGTEISFSLLLLSCFPLDLPKDILCSILAAYVALRFPVAVC RGIKQERVYARQIQK >gi|312956450|gb|AENW01000011.1| GENE 122 137038 - 137991 996 317 aa, chain - ## HITS:1 COG:SP1900_2 KEGG:ns NR:ns ## COG: SP1900_2 COG0340 # Protein_GI_number: 15901727 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Streptococcus pneumoniae TIGR4 # 75 314 10 250 252 150 39.0 3e-36 MSIRSELIRELEQNRTKPVSGQKLAQRLHVSRNAVCKMIHTLNEEGFEIASFPRKGYQLA ETSNKLSAEAISVYLKKKLPVYTFEQVDSTNQLLKKMAIDGSEHLTLIAAEEQRAGRGRF GRPFYSPSRTGIYMSLLLRMPQQLSDASMITIYAAVAVQRALKQLYQTDTQIKWVNDIFY QGKKLCGILCEAISDFESGRLEAIIVGIGLNTSTMTFPEELKDIAVSLSTHPVNRNKLIA CIVNELLALQKEEHSSVLAQYRDASMVLHQQITWMQNGKQLSGYVKDINNAGNLIVESED TTHILSSGEVSIKAVAA >gi|312956450|gb|AENW01000011.1| GENE 123 138389 - 139939 1586 516 aa, chain - ## HITS:1 COG:lin2648_1 KEGG:ns NR:ns ## COG: lin2648_1 COG3883 # Protein_GI_number: 16801710 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 63 243 35 208 208 69 26.0 2e-11 MKKKYAALFVSGALLISNAGLLKAESFEGRESEMNAKCAVIKDTKTQEECSRYKDYLQSK SDNLDKEISDIKSQIASVKGDVEKVSKLIADNNKKIASYEKEISSIQASIDQTQSSISDL KKQIKEKEDSIKERDKQMRARLLEMQAYTGSNYYIDFLMGSTSFTDLLRRTEIVGELNRY ENEQIKTLNKEKKKLDQDRKIVEEQKELLVVQQKDVKSSKAKVEALNEVKKDLLSDYHAK EANLATQKREAQMAQANLPKVDLSLAADFDEPEQQPEKPDTPQNGGNETGNSGNTDNGNS SDGNPDNGNADPDKGNSGNSGGNSGNNSNNGSSGGTAQSSSFIAPLQSGWHYEAGTWEYP GGGGHMGMDFSTGSTTGIPVVAPANGIIIHTYQGCGYGALNNWCGIPAGGGNNVALLTRV NGVVYAMPFYHLSSVAVSVGQRVNQGQVMGYSGSSGNSSGPHCHVEIIRVGSMTMTAALN QFNRTGDLTFGTGWNADAPNACGSAPCRERPEYYWR >gi|312956450|gb|AENW01000011.1| GENE 124 140102 - 140998 821 298 aa, chain - ## HITS:1 COG:BH3506_1 KEGG:ns NR:ns ## COG: BH3506_1 COG2207 # Protein_GI_number: 15616068 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 7 109 7 109 130 92 42.0 9e-19 MQAWEAIQKTLDYMEEHYEEELTIEQLSTIAHLSRFYYQRLFYRLTGYTVSEYLRSVRLK MAAGLLKADNGKIMDIAMQCGFSSHSTLTRAFRQCYGMSPAEYRASSDIHLDHVIKPELR MQYTLVDEGVPLICDDMVLEIQRRVQKEPLWFSGYTKEDESAKIAQPKENTLVALWDRLE QDDVLQHAALDEGNDILMPSQTPGAFTYMAAVHTAEPVKGYTAFEMPVGTYAVCEYEAES FEDLVQKALYKASAYLFEVWLPRHGYALDAFLIQRYIRPKQEDCRLQLWVKISDSLTL >gi|312956450|gb|AENW01000011.1| GENE 125 141090 - 141869 840 259 aa, chain - ## HITS:1 COG:TM0193 KEGG:ns NR:ns ## COG: TM0193 COG0390 # Protein_GI_number: 15642966 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Thermotoga maritima # 6 258 5 261 263 220 49.0 3e-57 MNDSVMDLSIVNLAIAYIFVLLLLIIFRARGIRRENMILIATTRMTVQLTIMGYILLYVF KNPSWWLTLLMLLIMLGFAIYNAAKRVRYDMSDDVKRLMGVSMTIGYLCTAVVFMLLVLQ VRPWFNPQYFIPISGMIIGNSMTGIALGANRLCANMQDHREKIENSLMLGASPKLAAHEE VNDAFDSAILPTMNNMMTMGIVSLPGMMTGQMLSGTFPLTAIKYQIGIMLAILGCTAVTV VVFVTLGYKTFFTRHASLK >gi|312956450|gb|AENW01000011.1| GENE 126 141862 - 142497 183 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 204 29 216 245 75 26 2e-12 MFELNNVTFKHILHIQHVCLDRCVTCIIGPSGSGKTTMLRLLNRLNEAEQGTILYNGEDI QKLNPMELRRRVVMLGQTPVIYPGDIEENLQIGLRLSGRLPATKQKLKEYLEKVDLHKEL QESCERLSGGEKQRLCLARVMLMDAEVYLVDEPSSALDKETESFVIENLVHFVTERKRQL IMVTHSAEVSAKYPKSLLRIENGDTRGYVYE >gi|312956450|gb|AENW01000011.1| GENE 127 142602 - 143477 829 291 aa, chain + ## HITS:1 COG:PAB0040 KEGG:ns NR:ns ## COG: PAB0040 COG0697 # Protein_GI_number: 14520295 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 5 284 23 295 295 72 25.0 6e-13 MHTKGILYTVLSAVLFGITPLITRAVYGYGANSMTVVFYRSLFVIPMLAAIMKGRHISFS ISAHDLRNTGIIAIFGSGLTTILLFTSYSYIDVGCATTLHFLYPVFVSLLCFAVYHEILS RRKLTALSLALLGALCFFDLSNSGSMLGLLLAAGSGLTYAFYMVQLEKTRLSHQNAYKIS FYLAIFILLETLVYHLLFSSIQFILPWNAYGLILLLSLVSSFLAVVLLQKGIQYLGSSTA SLFCLFEPVTSVVCGALFLKEALTPAKIIGCCIIFTALIIMSREQHTAASS >gi|312956450|gb|AENW01000011.1| GENE 128 143577 - 143723 71 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEPLNLASIAEIGGKYTSQRSEIISYILIALCAVAFVYLIIHQIRSHK >gi|312956450|gb|AENW01000011.1| GENE 129 144005 - 145840 2189 611 aa, chain - ## HITS:1 COG:BH1508 KEGG:ns NR:ns ## COG: BH1508 COG0367 # Protein_GI_number: 15614071 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Bacillus halodurans # 1 609 1 613 615 637 50.0 0 MCGIAGIVDGEHRMKYRNQQAVEEMLDTMKRRGPDQQNIYTDEAVTLLHARLSVMDLQHG KQPMQLKSDPRYVMVYNGELYNTEELRRELQKKGYAFQETSDTEVLLQAFIEWKETVVER LNGIFAFAVWDKKAHRLFMARDRMGVKPLFYTLQEGAMLFASEMKALLAHPQIPAILHAD GIAEIMLLGPGRTPGYGVFHNIRELKPGQYAWYDHKGMRLTTYFHLQDREHPDDFATTVQ TVHDLVTDSIRRQLIADVDVATFLSGGLDSSIISAVAAREFKKQGKTLHTFSVNYEDNEK YFHSTKFQPNSDQHYIEVMQSFLQSDHHDIVLKTEDLVDALYTAVDARDLPGMADVDSSL LLFCKEIRKYCTVALSGECADEIFGGYPWYRDPKIRATYGFPWAQSTKYRMGFLNEELAE QINAVTYVDQRYQETLKQSDILCNRTKEERRLREMVNLNMKWFMQTLLDRKDRMSMYNSL EVRVPFCDMRIAEYLYSVPWEFKDYQGYEKGLLREAVKGLLPDEVLWRKKSPYPKTWHPK YRELVSRQMQELLAQGNEPLLQLVKREKLQELLREDRSIPWYGQLMNTPQTIAYLLQVNY WLKKYHVQIQV >gi|312956450|gb|AENW01000011.1| GENE 130 145933 - 146757 597 274 aa, chain - ## HITS:1 COG:TM1552 KEGG:ns NR:ns ## COG: TM1552 COG1180 # Protein_GI_number: 15644300 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Thermotoga maritima # 5 274 18 283 331 251 45.0 1e-66 MSAVCELCPHNCRIPEGKCGFCGVRTCRNGRIVSTAYGKISSMALDPIEKKPLRRFHPGS QIMSIGSMGCNMRCPFCQNYEISMQEDAAFCVRLQPQKLVDIALQQKQRGNIGIAYTYNE PLINFEFVLACCKLARQHGLKNVIVTNGCIQEQKLLELLPYVDAMNIDVKAFDEEGYRRL QGDFTAVRRSVELAVQHTHVEITSLMVPGLHDDVDRIEEEAAWLASLHPDIPLHLTRFFP MYHMYGEQPTAKQLILKAVKAASGWLRYVYAGNM >gi|312956450|gb|AENW01000011.1| GENE 131 146741 - 148060 1472 439 aa, chain - ## HITS:1 COG:CAC1420_1 KEGG:ns NR:ns ## COG: CAC1420_1 COG3885 # Protein_GI_number: 15894699 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 268 3 276 299 196 33.0 7e-50 MLSKAYIVPHPPIILPEIGRGQERVIQNTVNAYRMIAHDIASAKPQTIVVFSPHAPSYRD YIQISDGAQAFGSFEAFGVKDVDMKVLYDEDFVDMLCHAAASQGLPAGTLGEQSQTLDHG TMVPLHFILQEYTDFRLVRISVSGLDRDTQVAFGNCLRRVIDESQRNVAVIASGDLSHKL KEDGPYGFHPMGPVFDEQIVDIIKSNDYARLLTMDEQIIEESANCGYPAFVMLHGVLQAY PIDSQFLSYEGPFGVGYATAIISVLKKDPYVALARESLEVYIRSHTVLPLRKSLPKDLLT CRGGVFVSLKKFGELRGCIGTIAPVQENLAQEIISNAISAGTRDPRFLPVEEKELPYLEY SVDVLKEAEQIDSLEQLDVRRYGVIVSDEHRRGLLLPDLEGVDTPLQQISIALNKAGMDP DEPFLLERFEVVRHHECRM >gi|312956450|gb|AENW01000011.1| GENE 132 148382 - 149353 1028 323 aa, chain - ## HITS:1 COG:BH3739 KEGG:ns NR:ns ## COG: BH3739 COG1077 # Protein_GI_number: 15616301 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Bacillus halodurans # 2 323 3 324 334 335 52.0 8e-92 MARKIGIDLGTTNLLICVDNKGILVDEPSIITVDATTKKCIAAGLDARDMLGRTPKNMIC IRPLKDGVVADFEATDMMLNYFLKKCDLKGMFKKNVILICHPTKITSVEKNAIRDCAYRA GAKKVYLEEEPKIAALGAGLDIGKASGNMVLDIGGGTSDIAVLSLGDIVCSTSIKTAGNK ITQDILENVRIQKKMYIGEQTADEIKRRIANALVVKEPETITISGRDVETGLPHSIDINS NEVESYIRSSLQEIVHATKTILEVTPPELAADIVQHGLVLTGGGALLKNLDQLMRNELQI PVYVAENALKCVVDGCTIMLQNL >gi|312956450|gb|AENW01000011.1| GENE 133 149356 - 149475 90 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKFVKVKIYQKDSCFFAFTGKKWYIIIGNSTMQDMKEG >gi|312956450|gb|AENW01000011.1| GENE 134 150033 - 151034 880 333 aa, chain - ## HITS:1 COG:no KEGG:CA_C2564 NR:ns ## KEGG: CA_C2564 # Name: not_defined # Def: hypothetical protein # Organism: C.acetobutylicum # Pathway: not_defined # 1 333 1 333 333 534 85.0 1e-150 MALFESYERRIDTINKVLNSYGISSIEEAKKLCDDLGVDVYNIVKEIQPICFENACWAYI AGAAIAIKKGDKSAYEVAKSLGEGLQSFCIPGSVADDRKVGIGHGNLAAMLLSDETKCFA FLAGHESFAAAEGAIGIARNANKARKEPLRVILNGLGKDAAKIISRINGFTYVETQFDYF TGELKELSRTAYSQGERAAVNCYGVDDVREGVAVMHHEGVDVSITGNSTNPTRFQHPVAG TYKKECIEQGKKYFSVASGGGTGRTLHPDNMAAGPASYGMTDTMGRMHSDAQFAGSSSVP AHVEMMGLIGMGNNPMVGASVAVAVAVSEAMNK >gi|312956450|gb|AENW01000011.1| GENE 135 151046 - 151738 541 230 aa, chain - ## HITS:1 COG:CAC2565 KEGG:ns NR:ns ## COG: CAC2565 COG0822 # Protein_GI_number: 15895825 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 230 1 230 230 350 74.0 1e-96 MIYSKEVENMCTVKCGASHGCAPIPEEGKWVYSREIKDISGLTHGIGWCAPQQGACKLTL NVKEGIIEEALIETIGCSGMTHSAAMASEAIVGKTLLEAVNTDLVCDAINTAMRELFLQI VYGRTQSAFSENGLPVGAGLEDLGKGTRSQVGTVYSTKVKGPRYLDLAEGYILKMGLDEN GEIIGYEYVNMGVFMDAVKKGVNAEEALNNAKKTYGRYADAVKYIDPRHE >gi|312956450|gb|AENW01000011.1| GENE 136 152142 - 152705 538 187 aa, chain - ## HITS:1 COG:BS_yhfR KEGG:ns NR:ns ## COG: BS_yhfR COG0406 # Protein_GI_number: 16078098 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Bacillus subtilis # 5 145 6 141 193 101 41.0 7e-22 MGLYFVRHGQTDWNVRGKLQGKSDIALNETGRLQAVETREKLKQVAMDAIYCSPLMRARE TAEIINVLWELPIQCDDRLMERSFGDMEGALRKDVPFDDLWAFSSASMFAGGEDTAHFYE RVESFLKEILPYAQEKEILIVAHGGVSIPYQCFFEGYACVENLSDLIIANCEVRHYAAKQ IQELVKG >gi|312956450|gb|AENW01000011.1| GENE 137 152725 - 153513 1085 262 aa, chain - ## HITS:1 COG:DR0470 KEGG:ns NR:ns ## COG: DR0470 COG1387 # Protein_GI_number: 15805497 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Deinococcus radiodurans # 1 259 4 243 260 79 26.0 7e-15 MIDGHMHLENGPLTVEYAMKYVEAGVKAGMDTIQILDHTHRFLEFKPMYDNLKQASVYQK DWFEKKKLEPLQSYFNLIEEMKKMELPIAVRFGLEVCYAPQDKAFLRDLLAGYPYDFLIG SIHSIDGLLYDMNGFSREILWDKYDTNAIYRRYYEIMEDMIESDLFTQIGHPDQLKIFHY EPDYDLKPTYERLAVLAKEHDVYMETNTGCHYRYLHEDVGTNHVFLEILKAHGVKIMTAS DAHQPQHVGMHIAEISRQLGLD >gi|312956450|gb|AENW01000011.1| GENE 138 153590 - 153952 384 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402366|ref|ZP_06646503.1| ## NR: gi|293402366|ref|ZP_06646503.1| hypothetical protein HMPREF0863_02644 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 118 1 121 122 137 52.0 2e-31 MRIKNDDVLAHLRSFGFTMQENNAQGFIRWQKRIGDMLVTIANGQFENKIRVSLLQDRNG NIRTSYKDILAYTELICSLQDAGLTGMSQDCTCYQEEDVVEPMDNPLISFPRKPEGFMAQ >gi|312956450|gb|AENW01000011.1| GENE 139 154253 - 154594 366 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400757|ref|ZP_06644902.1| ## NR: gi|293400757|ref|ZP_06644902.1| hypothetical protein HMPREF0863_01042 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 112 1 114 116 73 44.0 3e-12 MKSSDFFRVQSNRIYFMQSGRDYSINVMKRTEVLIRPVLKKAGATVANAVANSMTNSIAN GNEQVHIIVRIHLLRGYEDILMNEQVLIRGNLDYYEMVEHARRLQKKLKQYLA >gi|312956450|gb|AENW01000011.1| GENE 140 154853 - 156634 204 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 369 575 25 228 309 83 28 7e-15 MNKKLSSLKRIVFGLKPFISPYKWEFAGAVLMVIISVVTMVSAPSVEGMITTQLASDLSL AESIGKLQVNFDEITKIMLMLAFIYLAKTLSQVFAVIWLTNAIQHAMQDLRNALQSKIRR LPVRYFDRHQFGDVLSRITNDVDAISNALQQSFVNVVTGVLTIILALIMMFRIHVLMACI AFMIIPLSLLITVFIVRHSQKRFKAQQDALGALNGAITELYTGYNEILLFNKQQQSIEKF RNLNENLRQNACTAQFVSSTIGPLNALVTYLTIGGVAVVGTIQIIQGNLSVGNLQAFVRY IWQVNDPLSQISSLSSQIQSAFAAIARVLEILEEEEEIAELNPPKHIEQVKGNVTFSHVR FGYGEEPLMKDLNVEVKSGQMVAVVGPTGAGKTTLINLLLRFYDVNGGSICIDGVDIRDM KRGELRDMFGMVLQDTWLFSGSIYDNIRYGRLDARKDEIIHAAKMANVHHFIRTLPDGYH SVINEEANNISQGEKQLLTIARAILKDPQILILDEATSSVDTRLEKMLQEAMHRVMEGRT SFVIAHRLSTIRSADLILVINDGDIVEQGTHEELMEKQGYYEKLYNSQFADKE >gi|312956450|gb|AENW01000011.1| GENE 141 156627 - 158357 188 576 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 348 565 21 233 305 77 25 5e-13 MKLILHYLKRYKKLFIINVISVFGFALVELGIPTIIADMIDVGVMNADTDYIIRMGFVVL LISLIGVSMTILLGYCCAKISTAITRDIRNDIFDHAQRFTAYEFNRFGISSMITRTNNDA FQIQMFVNVLLRTALMTPIMFVASIIMTARASLPLSGIIVATIPLIIIGVFVVAKISKPI SENQQTSLDSLNRISRENLSGIRVIRAFDNDAYEQQRFDDTNEKFTGYSKKLFKLMMMTS PIFFLLMNVAGLCIYWVAALLIQGGDLPLGQLVAFMDYLFHAMFSIMLFCTVFMMYPRAE VSAKRIEAVFDTVPLVHNDGKRMDGNQQGTISFEHVTFVYPDGEEPVLKDVSFSAKKGET IAFIGSTGSGKSTLVNLIPRFYDVSEGSIRIDGVDIRDYDLFELRSRLGVIPQKAFLFNG TIADNIRFGKPDATMEEVMQAAKTAQAYDFIMEKEHGFEEEITEGATNVSGGQKQRLSIA RALVRKPDIYVFDDSFSALDFRTDATLRKELKKETGDAIVMVVAQRISSIMEADRIVVLN EGNVIGTGTHRELLKNCEIYKEIALSQLSEEELAHE >gi|312956450|gb|AENW01000011.1| GENE 142 158444 - 159259 871 271 aa, chain + ## HITS:1 COG:BS_bltR_1 KEGG:ns NR:ns ## COG: BS_bltR_1 COG0789 # Protein_GI_number: 16079711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 4 106 6 108 124 111 50.0 1e-24 MKEKKYLTAGQFAKICGVEKHVLFHYDEIGLFQPVMVNENGYRYYSYHQYDTFSVITKLK KMGMPLKDIKVFLEQRSPAVFLQLLEDKFEEVDREIEKLLALKRMMVYMKESTLFAVTHE DEDITIRQYPREILLCSDDLENASSRSFASFMEEYISFCKEHNVLVQESVGCMIKTDNIR NRDYLNFSYLFMKIEKDIRRNTHIREEGSYLCAWHKGSYDTIQNTYERMLAYAEQCNLII GPYAYEEYLIADIAQKDHTRYVTYIRMDLVD >gi|312956450|gb|AENW01000011.1| GENE 143 159993 - 160892 327 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 288 2 315 319 130 28 4e-29 NRMLITFDIGGTSIKYGILTLRKGQPVFVMQDEVSSDARVLKGPGILHRVESLIAKAMRQ DIKGIAISTAGMVDAEKGCIQYANDNIPEYTGLQFKQQLEARFHIPCWVENDVNAAALGE AVFGAGKGAAHVLMLTIGTGIGGAVVIDHTIYRGCSGSAGEIGYMWVMDHHFQDIASTTA LVQHVEAQTKEADLNGKIICARAKRGDAVCMQAIRELCSHIAIGVSSCACLMNPQIVILG GGIMTQKELFAPLMETYLKQYMNEEIYAHTQLAFAQLGNRAGMVGACAYWMKQEGIRFA >gi|312956450|gb|AENW01000011.1| GENE 144 160870 - 161337 541 155 aa, chain - ## HITS:1 COG:lin2929 KEGG:ns NR:ns ## COG: lin2929 COG1762 # Protein_GI_number: 16801988 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 1 145 2 146 148 135 50.0 3e-32 MLELIKEENVEVGVHAADWEDAIRRSAQHLLETGKIEERYIRAMIDAVHRVGPYIVLGNH VALAHARPECGVNELSVHFTTLQPPIPFGSEKFDPVSLIITLAAVDADSHLELISELADI LMEETHVERLSSCTTEREFVELLRRMKEESNAYYI >gi|312956450|gb|AENW01000011.1| GENE 145 161353 - 162012 759 219 aa, chain - ## HITS:1 COG:lin2930 KEGG:ns NR:ns ## COG: lin2930 COG0637 # Protein_GI_number: 16801989 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Listeria innocua # 1 216 1 216 218 215 49.0 6e-56 MLKALVFDFDGVIVDTETQWYYIYRDWLKKVYHYDLSIQDYLVCVGSSSERLFAFLKQKL GTDEDIRKFEKQAMAEFIERTRTLPAMEGVTELVTAAKKKGLRLAIATSATRKKPQVHLE RLQLLEYFDAFSTAELSRHIKPAPDIFLKAAELLGCSCAECLAIEDSRNGLIAADKAGMP CLIVPNKITESSDFTGCYRKVSSLKELKLKELIADFQSS >gi|312956450|gb|AENW01000011.1| GENE 146 162069 - 163493 1702 474 aa, chain - ## HITS:1 COG:lin2931 KEGG:ns NR:ns ## COG: lin2931 COG2213 # Protein_GI_number: 16801990 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Listeria innocua # 5 473 1 464 468 521 58.0 1e-147 MSNDVSLRVKAQRLGGKLSAMVLPNLGAFMGWGILTALGIWLSNDMLKAFISPVLTYLLP LLIAISGGKMIYGEKGAVIGAFTTMGVIIGADISMLLGAMIIAPLSAWLLKKLDAVVEPL IPVGFELLIGNLTVALLGAVIAIIGCVWIAPAITSLSAVFSAGVSTLENNNLLPLTAIFI EPAKVLFLNNAIGQGILTPLGTTQLNEFGKSVLFLLESNPGPGLGILLAYCFFGKGNAKA NAYGASIIHFFGGIHEIYFPFILMNPLTVLAAIAGGITGTFLFTLFNVGLVGVSSPGSIV TIMMMASAGDQLLILLAVLASTAVSFLVAAVIVKHSKQNDEDVNKNLKEAAKQMESLKGK KSRISSVFEEKEAVTDFRTVKRIVYVCDAGMGSSAMGASVIAKRLRKAGITDITVEHARV MELPDPKADIIVTHVSLRQVAHEKQPDIEIISIEDYLNAPEYDELVNSIKAARS >gi|312956450|gb|AENW01000011.1| GENE 147 163628 - 164629 1378 333 aa, chain - ## HITS:1 COG:lin2932 KEGG:ns NR:ns ## COG: lin2932 COG0673 # Protein_GI_number: 16801991 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 3 333 4 333 333 559 80.0 1e-159 MSKINVGVIGVGQMGTYHAQIYQKLPQVELCALCEFNDSRRKELETEFPGITLYKDYKEL LKDTAIEALSIVLPDNLHREAVELAVQAGKHILLEKPLAKELEDGKALYEITKDYDKVFT TGFLLRFDPRFAMIKERLDSNELGDIIHCYVRRNSPIIGPRRYIGASDLSMHVMIHDIDY INWWMDCQPVKVFAKNRSVLLKENGMNDVIYALVTYENGAVACMEACWTLPENSPTIIDD KVELVGTKGVAYVDSCDHGVRFVTGKGVQYPDSRHWYYVNGEVCGDLAEEVMAFVNNVAT NTKSVITPKQSYDALRVVDAIERSIVEGKEVAL >gi|312956450|gb|AENW01000011.1| GENE 148 164919 - 166847 2110 642 aa, chain + ## HITS:1 COG:lin0425_1 KEGG:ns NR:ns ## COG: lin0425_1 COG3711 # Protein_GI_number: 16799502 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 2 512 4 517 519 187 26.0 5e-47 MFQYTRLQDLLDYFLSHQGYMSPSVLTRHFQISQRTLRSDIHNLNEELSGFDAQIIMKRS QGYALEIKEGQTRALLENMLVNEEEKQLDSADKRINHIIIKMLYANTYLTQDALADEVFV SINTIINYLKTIRLILSKYQLTLQTKANLGYIVTGEEADKRRCIIDLITTNYQHYEFRFS QEQTALLNHVNLEQIKDIVMEFNRKNDLHFSDYNLKNLILHIALSISRLLVAKPIEEYAI PEHEALRTLLEPLITEIELDFQVVFTANEKNYIYSHYVSNTNELLDAQKNTEYIHNLVAN ILDSIFESYHFDLRSDLILEHDLTHHLQSILNARYYHLNKKNPLLNTIRNNYILAYEISG TAIKQAFANEPFELNDDEIGYISLHIGAAIERYFDSRYLKHKKAVIVYDSGYAAGSFLAS KLNTLFKETLEIIGRYPSHEIEEQKLQAADIVISTVALKQTVLPVVVVDIPLSRRDIENV ARAITMDEQHPIDKIAQFFDEKLFINTAADSKEEIIHTLCTLLHQEHCINDDFEASVLER EQRISTGMDGVVAIPHPLKICSLKSKIAVGVLQHPILWSDKDSAQIILLLGLADDAKKDI EKLYDTFVAMTHNAPLQELLFHARSLSEFLNILKQNLDTDAY >gi|312956450|gb|AENW01000011.1| GENE 149 167317 - 168279 903 320 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914731|ref|ZP_02076945.1| ## NR: gi|160914731|ref|ZP_02076945.1| hypothetical protein EUBDOL_00738 [Eubacterium dolichum DSM 3991] # 11 315 11 316 317 198 38.0 3e-49 MQKSKEREYPIPFHNDVFFKYMLIGEDAGSAMLRSRIIEEIYGLKVQKTQVLNPELLPEA FFGKRAVLDVVLEDETGHLYDLEMQVSGYTKEEQLRFQQYGYRLAGRQLKQGNDYTKLKP FYQIIFMNYKPKDTGRMIRHYTVKDEDNREEPNGTLHRAIVFLPMIRQRVKEVGGIENLT EFETFCYVLAYNPDDAILNMKRRMVNVAMKKYNEMREDGSLYSWAESVEFAQRAVQANLE EQTAEAEKSGLERGFKQGLQKGLDEGKRTLLQSLIVHKYGIEDEWVGSLSDQQMDDAVIQ ILDCDTYEALKERLKNKEMK >gi|312956450|gb|AENW01000011.1| GENE 150 168822 - 169091 244 89 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_0587 NR:ns ## KEGG: CDR20291_0587 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 88 1 88 89 82 53.0 5e-15 MCSSRCGVDCTTCERKEAVHCLGCNAMKQPFWGSPCQVKTCCEEKHLQHCGECKEFPCEM CANMGKEMGFDPEPRLANLRAWANEKTAG >gi|312956450|gb|AENW01000011.1| GENE 151 169112 - 169669 589 185 aa, chain - ## HITS:1 COG:MA2093 KEGG:ns NR:ns ## COG: MA2093 COG1695 # Protein_GI_number: 20090938 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 2 180 1 179 189 125 37.0 6e-29 MVSSIDLILLGMVYDQPRSAYDIQKHVEYRNLSHWVKISSPSVYKKLRVLEQKGYLMTKR QREGNMPEKSIYSLTREGRKYFHELMHEISAQPFEILFDFNAVVVSLNKVDKEEGLECVQ RIAQSLQDTRTYLSMQRDAKKEIPYVGRSILEQQLSVCETLLTWCHTLCEDLKSSDGLEK MKELP >gi|312956450|gb|AENW01000011.1| GENE 152 169733 - 170236 488 167 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401758|ref|ZP_06645899.1| ## NR: gi|293401758|ref|ZP_06645899.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 164 9 175 177 84 33.0 2e-15 MNIIFLDIDGVLMPLGSHEYLRSDAAALKAYYISQDQRFAPVNAYDIAAVDLDWYPKASR YIRQLAETCHASIVLTSSWRLHRSLETLKLLFSLHGLDRYLVDVTMDTGNKAEEIQMYLW GYPEIKRYVVIDDLDMERSFKDHFVQVRDKYFNEDNLKEAVCILRKG >gi|312956450|gb|AENW01000011.1| GENE 153 170217 - 170756 462 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401758|ref|ZP_06645899.1| ## NR: gi|293401758|ref|ZP_06645899.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 167 9 177 177 128 39.0 1e-28 MKVIFLDIDGVLYPCFSRRTSCFHAEAVRSRLQKEGISTEGITDWDLCSVVCGFQIAAVE RLRRLCEQSGAKIVLETSWKCMRNLDEMKRLFSLWRLDSYIVEMTDNEEMFFKEGAIQRY LDAHPAVENYVILDDISMRKAFPGHDVVTPDILDEESYRQALHILNHWTKELGHEHHLP >gi|312956450|gb|AENW01000011.1| GENE 154 170893 - 171195 481 100 aa, chain + ## HITS:1 COG:YPO0839 KEGG:ns NR:ns ## COG: YPO0839 COG1028 # Protein_GI_number: 16121147 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Yersinia pestis # 3 100 4 101 251 86 39.0 1e-17 MNLELDGRVALVSGCSQGLGYACVRTLARHGADIFGVSIGDDSALKKEVEALGRSYHSLT VSLTTPGSIHDVMKEVLAAYGHVDILLNFAGILKKEDTLE >gi|312956450|gb|AENW01000011.1| GENE 155 171380 - 171637 303 85 aa, chain + ## HITS:1 COG:BS_kduD KEGG:ns NR:ns ## COG: BS_kduD COG1028 # Protein_GI_number: 16079272 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 1 83 169 251 254 68 39.0 3e-12 MTKYMAHEFAGRDIQINAITLGFMNEGNRLQSGDGQNDDLSVLKEIPAGRWGTWQDLDGL LLVLCSAAGNYINGACIPLDGGYSI >gi|312956450|gb|AENW01000011.1| GENE 156 171681 - 171824 191 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEANCIVQHEVERMEPKREDIILAYLTLLLVLLIGLFLVWVVAMFLE >gi|312956450|gb|AENW01000011.1| GENE 157 171943 - 172326 215 127 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPGIFGESTCPQEEDMKRNQIDTDLGAAIKEGIILNNMTQKQLAKALHISQQTLSCYIHN QRTPNIHDLVAISQILNLDIYVLLGLKKDIPDHLDHIIYKNIMKLDHKGKKMVYDYVERL LKYSCPH >gi|312956450|gb|AENW01000011.1| GENE 158 172375 - 172677 323 100 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_20620 NR:ns ## KEGG: EUBELI_20620 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 4 99 6 101 103 76 45.0 3e-13 MTEYLPYILVMAVVTYLIRMLPLTFFQKEIRSPFIKSFLFYVPYAVLGAMTFPAIFTATG HTLASCAGCFVGLVLAYQGKGLLSVAVASCITAYLAACIF >gi|312956450|gb|AENW01000011.1| GENE 159 172670 - 173362 802 230 aa, chain - ## HITS:1 COG:BH2910 KEGG:ns NR:ns ## COG: BH2910 COG1296 # Protein_GI_number: 15615473 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus halodurans # 3 215 17 223 237 110 33.0 3e-24 MRKGIQDGVPIGLGYLSVSFTFGMMAVSNGIPVEAAVVISLTNVTSAGQFSGLTLMLAHG SYVELALSQFIINLRYALMSLSLTQKVDRHMKTHERALIAYGVTDEIFALASSTYERVGK WYMAGLIAFPVFCWTLGTFLGGAASTLLPEAIRSALGIAIYGMFLAIIIPPARKLRSVRI VLFLSVILSCLFAAMQAVVPVSSGFVIIICTIAASAFGAWFFPVEEVQHD >gi|312956450|gb|AENW01000011.1| GENE 160 173857 - 174678 954 273 aa, chain - ## HITS:1 COG:SP1245 KEGG:ns NR:ns ## COG: SP1245 COG0561 # Protein_GI_number: 15901106 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 3 272 5 269 272 112 32.0 5e-25 MYKLIACDLDETLLNTDKEICARNIAAIKRAEREYGVRFVPATGRGYTCIDNVLHTLGVY DAEQEYTISNNGGVVTENKNYRKLSFHELPYEIAERLFAFGIEQDVCIQVFTAEDVYAFH LNEDERSWLFSFKPDSIVCEETSLAFLKGTPITKILFQNTDIPYLHTLADQLHALTNQRV AVSFSSNRYLELNPNGVDKGLGLRDLCEHLQIDLSETIAIGDNFNDVGMLREAGLSAAVA NAVPEIKEMCDYVCTADHNEGAVAEVIERFIFV >gi|312956450|gb|AENW01000011.1| GENE 161 174671 - 175516 992 281 aa, chain - ## HITS:1 COG:MA0317 KEGG:ns NR:ns ## COG: MA0317 COG0561 # Protein_GI_number: 20089215 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Methanosarcina acetivorans str.C2A # 1 141 7 148 151 94 35.0 2e-19 MKTLYVSDLDGTLLNSNTALTDTTIETINALVEEGMEFTFATARSITSASLVSRGLHLRT PLIVYNGVYLLDPDSHDILYSHSFTRQDAQDILNYLLRHDMIPFVYSYIDGRERVSYMEE GMHEGGKYYMESRPYDKRFRKVDTTEQLLEGDVFYFTCIHDGSFLKPMYEYLEETTDYVI VFQQELYREEYWLEVMPRGVSKAQAILELKEKGGYDRVISFGDAINDLPMFQISDECYAV GNAIEELKNTATAVIGDHDADAVAMWLKENYQKKAGGSASV >gi|312956450|gb|AENW01000011.1| GENE 162 175494 - 176258 1001 254 aa, chain - ## HITS:1 COG:no KEGG:Dfer_4887 NR:ns ## KEGG: Dfer_4887 # Name: not_defined # Def: protein of unknown function DUF1361 # Organism: D.fermentans # Pathway: not_defined # 38 253 24 224 226 83 32.0 9e-15 MEMINGGCRIYAILMNEGGLSMMKKLWKQNFWLLAALGAYALVSLYVYERSGIFIHRAIV WNVFLALLPYLFMTLFFAAQQRRHHLGMLAAFLCWLLLFPNVPYLITDFIHISPLTFYIF QETGSVYVRELLPWLELLHLAVGIFFGIMSGYRSLYLLHEFTAERLGQLRTWLLAALICL LSSYGVYLGRFLRLNSWDIMHPSSLIEKIVQGSDTFSLQFTLVFFLFLFITYGLYYFCFH KKIGGTRHEDTLRQ >gi|312956450|gb|AENW01000011.1| GENE 163 176334 - 176756 489 140 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKSENSKILPYTKKQIASVILHPETCNIRGYQVYKKLDEDNWIEDYGDHFLMKFYFTEV SEDRIVMERYPFAQSSVHVTKTIFEMKDADNGQVELSIREKVTKGDFVRKITKVIENHDQ NDTYYMDLITRIQKYCAKRK >gi|312956450|gb|AENW01000011.1| GENE 164 176856 - 177134 378 92 aa, chain + ## HITS:1 COG:no KEGG:lp_1789 NR:ns ## KEGG: lp_1789 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum # Pathway: not_defined # 10 81 203 275 283 65 42.0 7e-10 MKSVNLDIFYQAEPFTIHRMPKKQEPRKSILALAAAQLPNRDLSEWELNELLKPMYEDFV ELRRYLVDYKLLNRSRDGSRYHICKSYGDTIK >gi|312956450|gb|AENW01000011.1| GENE 165 177268 - 177465 191 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKRISRLIKTFIGVWIGCLIAYFISLNFGGNVDWFTGVNICIAILVFFLIQEIICFRRH KGHKD >gi|312956450|gb|AENW01000011.1| GENE 166 177484 - 177948 224 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTFILTSALYTCVLPTSIVHATEFPVAFRASNPYPEHSWINLGTITLDSVTINNAIDVRS VFLTVLGGIVGSNFGAIGATLVSSVSALVNKGHTKFYIRLTQYVSTDYQWHYYSYTVYED AKCTKKVGSYTSQKWKDRYARKLMELGLSMLSLS Prediction of potential genes in microbial genomes Time: Sat May 14 02:02:58 2011 Seq name: gi|312956335|gb|AENW01000012.1| Clostridium sp. HGF2 contig00051, whole genome shotgun sequence Length of sequence - 117601 bp Number of predicted genes - 103, with homology - 89 Number of transcription units - 60, operones - 23 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 722 - 1141 181 ## CDR20291_1773 hypothetical protein - Prom 1228 - 1287 4.8 - Term 1252 - 1294 9.4 3 2 Tu 1 . - CDS 1325 - 1792 300 ## gi|225575116|ref|ZP_03783726.1| hypothetical protein RUMHYD_03205 - Prom 1836 - 1895 7.7 - Term 1874 - 1916 2.3 4 3 Tu 1 . - CDS 1926 - 2267 161 ## gi|255280574|ref|ZP_05345129.1| ABC transporter permease protein - Term 2617 - 2653 -0.9 5 4 Tu 1 . - CDS 2724 - 3344 458 ## gi|291548981|emb|CBL25243.1| Predicted transcriptional regulator - Prom 3387 - 3446 5.3 + Prom 3716 - 3775 3.1 6 5 Op 1 . + CDS 3878 - 5020 783 ## COG2946 Putative phage replication protein RstA 7 5 Op 2 . + CDS 5013 - 5219 243 ## SMU.1031 putative transposon excisionase; Tn916 ORF1-like 8 5 Op 3 . + CDS 5299 - 6492 647 ## COG0582 Integrase + Term 6583 - 6625 0.2 - Term 6646 - 6710 -0.9 9 6 Op 1 . - CDS 6716 - 7888 1325 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 7909 - 7968 4.6 - Term 7955 - 7985 -0.6 10 6 Op 2 . - CDS 7986 - 9470 1283 ## COG0733 Na+-dependent transporters of the SNF family - Prom 9491 - 9550 3.5 - Term 9510 - 9546 -0.7 11 7 Tu 1 . - CDS 9672 - 10301 538 ## COG0546 Predicted phosphatases - Prom 10342 - 10401 5.0 - Term 10435 - 10477 1.1 12 8 Op 1 . - CDS 10559 - 12445 2132 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 13 8 Op 2 . - CDS 12499 - 14427 2255 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 14 8 Op 3 . - CDS 14505 - 15686 1011 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 15748 - 15807 1.7 - Term 15826 - 15862 4.0 15 9 Tu 1 . - CDS 15864 - 16775 1087 ## Ccel_0368 hypothetical protein - Prom 16831 - 16890 2.2 16 10 Tu 1 . - CDS 16924 - 17376 227 ## COG1396 Predicted transcriptional regulators - Prom 17401 - 17460 3.4 17 11 Tu 1 . - CDS 17487 - 17924 108 ## Ccur_08110 hypothetical protein - Prom 18121 - 18180 6.4 18 12 Tu 1 . - CDS 18268 - 18867 691 ## Dalk_0727 transcriptional regulator, TetR family - Prom 18949 - 19008 4.5 + Prom 18908 - 18967 5.5 19 13 Tu 1 . + CDS 19071 - 20993 2170 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 21216 - 21262 0.5 - TRNA 21463 - 21537 80.3 # Thr CGT 0 0 20 14 Tu 1 . - CDS 21739 - 23016 867 ## COG2206 HD-GYP domain - Term 23050 - 23086 2.3 21 15 Op 1 1/0.100 - CDS 23092 - 25257 2352 ## COG1511 Predicted membrane protein 22 15 Op 2 . - CDS 25271 - 27343 2277 ## COG1033 Predicted exporters of the RND superfamily 23 15 Op 3 . - CDS 27365 - 27961 711 ## CLH_0731 transcriptional regulator, TetR family - Prom 27998 - 28057 3.2 + TRNA 28810 - 28885 99.8 # Val TAC 0 0 - Term 29117 - 29159 2.2 24 16 Tu 1 . - CDS 29402 - 32890 2541 ## COG5492 Bacterial surface proteins containing Ig-like domains - Prom 33059 - 33118 4.6 - Term 33111 - 33162 5.1 25 17 Op 1 1/0.100 - CDS 33218 - 34024 996 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 26 17 Op 2 . - CDS 34055 - 34750 867 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 27 17 Op 3 . - CDS 34759 - 36048 1435 ## COG0371 Glycerol dehydrogenase and related enzymes 28 17 Op 4 . - CDS 36052 - 37467 1921 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 29 17 Op 5 . - CDS 37518 - 37820 521 ## Cbei_0542 PTS system, galactitol-specific IIB component, putative 30 17 Op 6 . - CDS 37817 - 38299 557 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 38392 - 38451 3.1 31 18 Tu 1 . - CDS 38541 - 39233 651 ## - Prom 39352 - 39411 5.3 32 19 Tu 1 . - CDS 39426 - 39593 164 ## - Prom 39626 - 39685 7.0 + Prom 39756 - 39815 7.5 33 20 Tu 1 . + CDS 39971 - 40207 236 ## + Term 40231 - 40285 6.0 - Term 40226 - 40266 3.4 34 21 Op 1 3/0.000 - CDS 40277 - 41104 907 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 41151 - 41210 3.3 35 21 Op 2 . - CDS 41213 - 42241 1278 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 42359 - 42418 4.1 + Prom 42302 - 42361 8.5 36 22 Op 1 . + CDS 42398 - 43174 815 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 43206 - 43265 6.0 37 22 Op 2 . + CDS 43309 - 43773 504 ## + Term 43774 - 43832 4.6 - Term 43769 - 43814 0.4 38 23 Tu 1 . - CDS 43896 - 45953 2246 ## COG3711 Transcriptional antiterminator - Prom 46092 - 46151 5.5 + Prom 46017 - 46076 4.6 39 24 Tu 1 . + CDS 46096 - 46974 964 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Term 46971 - 47020 6.9 40 25 Op 1 . - CDS 47040 - 47483 415 ## - Prom 47507 - 47566 5.5 41 25 Op 2 . - CDS 47652 - 49565 1413 ## COG3711 Transcriptional antiterminator - Prom 49593 - 49652 6.3 + Prom 49552 - 49611 7.3 42 26 Op 1 10/0.000 + CDS 49754 - 50077 461 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 43 26 Op 2 13/0.000 + CDS 50100 - 51386 1232 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 44 26 Op 3 2/0.000 + CDS 51402 - 51740 393 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 45 26 Op 4 . + CDS 51798 - 53219 1393 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 53223 - 53273 7.9 + Prom 53322 - 53381 5.0 46 27 Op 1 40/0.000 + CDS 53412 - 54923 1296 ## COG0642 Signal transduction histidine kinase 47 27 Op 2 . + CDS 54920 - 55612 1058 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Term 56013 - 56058 6.4 48 28 Op 1 1/0.100 - CDS 56098 - 57402 1427 ## COG1653 ABC-type sugar transport system, periplasmic component 49 28 Op 2 19/0.000 - CDS 57399 - 58076 887 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 50 28 Op 3 1/0.100 - CDS 58076 - 59383 1411 ## COG4585 Signal transduction histidine kinase 51 28 Op 4 . - CDS 59386 - 60363 1257 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 60384 - 60443 5.9 - Term 60699 - 60738 -0.7 52 29 Tu 1 . - CDS 60820 - 61278 237 ## COG3467 Predicted flavin-nucleotide-binding protein - Prom 61369 - 61428 5.6 + Prom 61327 - 61386 7.9 53 30 Tu 1 . + CDS 61409 - 61729 394 ## + Term 61912 - 61956 -0.8 54 31 Op 1 . - CDS 61785 - 61982 127 ## 55 31 Op 2 . - CDS 62043 - 62501 421 ## CPF_1302 hypothetical protein - Prom 62523 - 62582 4.0 56 31 Op 3 . - CDS 62586 - 62813 351 ## - Prom 62935 - 62994 7.9 + Prom 62829 - 62888 1.8 57 32 Tu 1 . + CDS 62942 - 63529 739 ## COG1051 ADP-ribose pyrophosphatase + Term 63606 - 63639 3.1 58 33 Tu 1 . - CDS 63952 - 65022 1045 ## COG0176 Transaldolase - Prom 65054 - 65113 5.5 + Prom 64973 - 65032 4.9 59 34 Tu 1 . + CDS 65257 - 66036 682 ## COG1349 Transcriptional regulators of sugar metabolism 60 35 Tu 1 . - CDS 66286 - 66723 389 ## - Prom 66839 - 66898 4.8 - Term 66898 - 66938 -0.9 61 36 Op 1 11/0.000 - CDS 67120 - 68028 611 ## COG1180 Pyruvate-formate lyase-activating enzyme 62 36 Op 2 . - CDS 68022 - 70442 2384 ## COG1882 Pyruvate-formate lyase - Prom 70590 - 70649 3.4 63 37 Tu 1 . - CDS 70804 - 72084 1059 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 72104 - 72163 4.9 64 38 Op 1 7/0.000 - CDS 72673 - 73716 1097 ## COG1299 Phosphotransferase system, fructose-specific IIC component 65 38 Op 2 8/0.000 - CDS 73722 - 74036 425 ## COG1445 Phosphotransferase system fructose-specific component IIB 66 38 Op 3 5/0.000 - CDS 74033 - 74497 235 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 67 38 Op 4 . - CDS 74490 - 76409 940 ## COG3711 Transcriptional antiterminator 68 38 Op 5 . - CDS 76425 - 77036 543 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Prom 77255 - 77314 3.9 69 39 Op 1 . - CDS 77330 - 78091 941 ## COG1349 Transcriptional regulators of sugar metabolism 70 39 Op 2 . - CDS 78105 - 78302 63 ## - Prom 78399 - 78458 7.2 + Prom 78423 - 78482 6.4 71 40 Op 1 . + CDS 78523 - 79185 288 ## gi|160938015|ref|ZP_02085372.1| hypothetical protein CLOBOL_02908 + Term 79194 - 79227 2.1 + Prom 79227 - 79286 1.6 72 40 Op 2 . + CDS 79387 - 79986 321 ## BMB171_C2140 hypothetical protein + Term 80065 - 80109 7.1 + Prom 80183 - 80242 6.2 73 41 Tu 1 . + CDS 80307 - 82034 2198 ## CD196_3147 putative exosporium glycoprotein + Prom 82073 - 82132 3.6 74 42 Tu 1 . + CDS 82210 - 83835 1983 ## Cbei_2587 triple helix repeat-containing collagen - Term 83843 - 83896 5.1 75 43 Op 1 . - CDS 83904 - 86252 1750 ## EUBREC_1883 hypothetical protein 76 43 Op 2 . - CDS 86246 - 86971 239 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 77 43 Op 3 . - CDS 86976 - 88289 1332 ## - Prom 88360 - 88419 2.6 - Term 88392 - 88424 2.4 78 44 Op 1 . - CDS 88425 - 89186 887 ## 79 44 Op 2 40/0.000 - CDS 89176 - 90600 1397 ## COG0642 Signal transduction histidine kinase 80 44 Op 3 . - CDS 90584 - 91252 1003 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 91275 - 91334 5.7 - Term 91546 - 91593 3.1 81 45 Tu 1 . - CDS 91634 - 92554 823 ## PST_3826 hypothetical protein + Prom 93133 - 93192 6.1 82 46 Tu 1 . + CDS 93313 - 93723 387 ## + Term 93813 - 93852 -0.9 83 47 Tu 1 . - CDS 94059 - 94262 336 ## gi|295099823|emb|CBK88912.1| hypothetical protein - Prom 94288 - 94347 5.8 - Term 94370 - 94427 6.5 84 48 Tu 1 . - CDS 94474 - 94893 489 ## CLH_0366 hypothetical protein - Prom 94916 - 94975 5.6 - Term 95037 - 95068 4.1 85 49 Op 1 11/0.000 - CDS 95118 - 96014 771 ## COG1180 Pyruvate-formate lyase-activating enzyme 86 49 Op 2 . - CDS 96007 - 98277 2710 ## COG1882 Pyruvate-formate lyase 87 49 Op 3 . - CDS 98310 - 99059 1014 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase - Prom 99090 - 99149 12.6 + Prom 99138 - 99197 10.4 88 50 Tu 1 . + CDS 99373 - 99726 447 ## COG0789 Predicted transcriptional regulators + Term 99776 - 99840 4.0 89 51 Tu 1 . + CDS 100140 - 101324 1725 ## wcw_1811 hypothetical protein + Term 101385 - 101420 1.2 - Term 101635 - 101677 6.8 90 52 Tu 1 . - CDS 101805 - 102404 559 ## EUBELI_00847 hypothetical protein - Prom 102459 - 102518 7.3 - Term 102719 - 102768 -0.3 91 53 Op 1 . - CDS 102791 - 103057 329 ## gi|293402117|ref|ZP_06646256.1| hypothetical protein HMPREF0863_02397 92 53 Op 2 . - CDS 103108 - 104721 704 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 104770 - 104829 7.6 93 54 Tu 1 . - CDS 105827 - 107041 778 ## COG2946 Putative phage replication protein RstA - Prom 107211 - 107270 5.6 - Term 107346 - 107388 11.2 94 55 Op 1 18/0.000 - CDS 107450 - 107917 467 ## COG0054 Riboflavin synthase beta-chain 95 55 Op 2 15/0.000 - CDS 107918 - 109123 558 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 96 55 Op 3 16/0.000 - CDS 109143 - 109778 76 ## COG0307 Riboflavin synthase alpha chain 97 55 Op 4 . - CDS 109763 - 110863 264 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis - Term 110932 - 110978 8.0 98 56 Tu 1 . - CDS 111217 - 111444 427 ## - Prom 111546 - 111605 4.5 - Term 111644 - 111672 2.3 99 57 Tu 1 . - CDS 111674 - 112150 469 ## gi|293402458|ref|ZP_06646594.1| hypothetical protein HMPREF0863_02735 - Prom 112254 - 112313 2.5 + Prom 112367 - 112426 4.1 100 58 Op 1 . + CDS 112447 - 113067 797 ## Apre_1054 hypothetical protein 101 58 Op 2 . + CDS 113084 - 113374 418 ## Mlab_0038 hypothetical protein 102 59 Tu 1 . - CDS 113521 - 114306 740 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 114326 - 114385 6.1 + Prom 114318 - 114377 8.9 103 60 Tu 1 . + CDS 114508 - 116862 1928 ## COG0474 Cation transport ATPase + Term 116875 - 116918 5.1 + TRNA 117197 - 117273 67.7 # Arg CCT 0 0 Predicted protein(s) >gi|312956335|gb|AENW01000012.1| GENE 1 477 - 716 203 79 aa, chain - ## HITS:1 COG:no KEGG:CD3370A NR:ns ## KEGG: CD3370A # Name: not_defined # Def: putative conjugative transposon excisionase # Organism: C.difficile # Pathway: not_defined # 8 79 9 79 79 70 52.0 1e-11 MSKDYGYPSFELICRASSGDEVAIREILKFYDAYISKLCLRPFYHCESGKIIMQVDEELK GEVYTDMMKAILKFEIRVK >gi|312956335|gb|AENW01000012.1| GENE 2 722 - 1141 181 139 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1773 NR:ns ## KEGG: CDR20291_1773 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 3 135 4 136 145 89 39.0 4e-17 MNTSSFKDIVRLQFNSLMMIIIKGRVKYHKKQIMKRSKNEVLFCEMSETERLEQGTVDTY IYDYVSFQVFHFTICVTDEKLATALNMLSKKQRSTILLRYFQGMNDREISELYHVSRSAI FSRRSRGLKKLKMLLSERK >gi|312956335|gb|AENW01000012.1| GENE 3 1325 - 1792 300 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225575116|ref|ZP_03783726.1| ## NR: gi|225575116|ref|ZP_03783726.1| hypothetical protein RUMHYD_03205 [Blautia hydrogenotrophica DSM 10507] # 1 152 1 148 148 138 55.0 1e-31 MATEKKVYKVINEAGLKALENKCIIVKYAPHNLSAKILEFFNSEFYVLQLCEHEIVLIPF NLMTLNMTLKKEELLVIPYSRIKSIEISEDLLNYIISITTDTDIIRLSTQQKELSNLRTS GSLTSKKAGITLENWHKDNLDITLEALKKIDTNSN >gi|312956335|gb|AENW01000012.1| GENE 4 1926 - 2267 161 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255280574|ref|ZP_05345129.1| ## NR: gi|255280574|ref|ZP_05345129.1| ABC transporter permease protein [Bryantella formatexigens DSM 14469] # 11 113 8 105 105 74 45.0 2e-12 MLSLYEFLWNVFNSKTVLIIGAWASLPLTLILIVMFVRKQNRDERGWKIKGKASAIAFIY FIIMANLLAKAVGAMVPDTLEVGYVFCANVIQWLYDTMIFIEIIAILILNKIE >gi|312956335|gb|AENW01000012.1| GENE 5 2724 - 3344 458 206 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291548981|emb|CBL25243.1| ## NR: gi|291548981|emb|CBL25243.1| Predicted transcriptional regulator [Ruminococcus torques L2-14] # 2 206 7 211 211 331 88.0 2e-89 MKINFLGNNIQTIRKYRGMKQQELADKIGINMQSLSKIERGLNYPAYDTLEKIMEVLDVT PNELLSGEWKYINQAEKEVCQFLRTEERLNTELKHGHYDNFFDSEEEWLEYELEKLREYI TDYINGNNIQAGDLYPIKEFIQHLKFQRLLDRYDDLYSMDMFGESIEGHKYKTPFQFVKR INPNSKEDMELLREVLGNNHFDDEDE >gi|312956335|gb|AENW01000012.1| GENE 6 3878 - 5020 783 380 aa, chain + ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 63 372 25 351 352 143 30.0 6e-34 MNNLEFALEMKNKRLASGLSQGELASLTHLSRYSINRFENGKANASRETQNIILRCLNYY VCDKPFYLLVDYLSVRFPTTDALAIIRKVLGMKADYFIHYDYGYYGYKEHYTYGEIKVMV SDDEHMGVFLELKGAGSRNMEYVLQAQNRDWYSFLNRCLDCGGLIRRFDLAVNDMCGLLD IPTLSEKYKNGGADCRCKNYENVQGGKLSGKNRDLASTLYIGSKASTKYFCLYEKQKEQA TKKKHTDIINRFEIRLRDTKAVQAVEELLLTYNPHGLVFYLITDFVDFPDYPLWEIFTSH DSLPFEMNPVPVNMERTLQWLERQVMPSIVMIEEIDRLTGSNYMKMIDECNHLSEKQEMI VEQMCTDIADVIESEGVFYE >gi|312956335|gb|AENW01000012.1| GENE 7 5013 - 5219 243 68 aa, chain + ## HITS:1 COG:no KEGG:SMU.1031 NR:ns ## KEGG: SMU.1031 # Name: xis # Def: putative transposon excisionase; Tn916 ORF1-like # Organism: S.mutans # Pathway: not_defined # 3 68 2 67 67 104 83.0 1e-21 MSNAQDIPVWEKYTLTIEEASKYFRIGENKLRRLAEENKDAGWLIMNGNRIQIKRRQFEQ VIDKLDAI >gi|312956335|gb|AENW01000012.1| GENE 8 5299 - 6492 647 397 aa, chain + ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 92 392 79 377 387 83 28.0 7e-16 MKEKRRDNKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDVTPKGKRHVISL REKEEQIKKDLLDGIDSTGKKMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGA RSIDTIKPSDAKEWALRMKEKGFSYNTINNHKRSLKASFYIAIQDDYVRKNPFDFKLNEV IEDDTKGKVALTEGQEQALLSFIKIDNVYHKYYDDVLILLKTGLRISELCGLTVKDIDFK NEIVHIDHQLLKSKEQGYYIETPKTKSGIRRVPLSEETIKAFQRVIKSRPKTKPTQVDGH SDFVFINHKGKPKVAIDYSTLFVRMVKKYNKHHKDNPLPHITPHILRHTFCTKMAHRNIN PKDLQYIMGHSNISITMDWYAHSSIESAKTEIKRLIA >gi|312956335|gb|AENW01000012.1| GENE 9 6716 - 7888 1325 390 aa, chain - ## HITS:1 COG:FN1415 KEGG:ns NR:ns ## COG: FN1415 COG1979 # Protein_GI_number: 19704747 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Fusobacterium nucleatum # 1 390 1 385 385 290 38.0 3e-78 MGNFTFYAPTRVYFGRKEEEQIGSILKQEGCHRVLVHYGGQSAVKSGLLDRVLASLKKAG ISAVTLGGVVPNPQLSKVREGIALAKKEQVDFILAVGGGSVIDSAKGIGYGVVNEGDVWE YYARRKKVTGCLPVGAILTIAAAGSEMSNSSVITNEDGWLKRGLSSDYGRCRFAIMNPEL TMTLPPYQTASGCTDIILHTMERYFIKENNMDITDGFAESLMRTVMKHTRILMKEPNNYE SRAEVMWAGSLSHNDITGSRSFGDWACHQLEHELSGMYKVAHGAGLAAVWGSWARYVYQE QPSRFAQYARNVMGIREENDVECALAGIEATEQFFKEIGMPTSIHEMGITLCEEDIRKLA WKCSFEDERTIGCFKVLKKEDMENIYRIAK >gi|312956335|gb|AENW01000012.1| GENE 10 7986 - 9470 1283 494 aa, chain - ## HITS:1 COG:MA0901 KEGG:ns NR:ns ## COG: MA0901 COG0733 # Protein_GI_number: 20089780 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Methanosarcina acetivorans str.C2A # 40 487 8 451 459 447 54.0 1e-125 MFPFVFVDFHTKFFYNEERLCSWGTLSAGHFVKGVIMENKREKLSSRLGFIFLSAGCAIG LGNIWRFPYMVGKYGGGAFVLVYLFFLVLLGLPIIVMEYSVGRGSGKSVARSFHVLEKPG QLWHRFSYVAMAGNYLLVMFYTTISGWMLAYFAKMISGEFNGLDPQEVKHVFASLQQNPQ ASLFWMLLIVAIGCGVCALGLQNGVEKITKGMMGLLLAVMILLVVKSLSLDGAMKGVSFY LIPDFDELMKNGIFNAIYAAMGQAFFTLSIGMGGMAIFGSYIDRKHSLSGEGVRVMALDT FVAFMAGMIIFPACMSFGVAPDSGPGLVFVTLPNIFNEMANGQLWGTLFFVFMNFAALST IIAVFENIVSFTIDLCNWTRRKSVLLNFIIIAVGSIPCAIGFSVLSGFQPFGEESAVLDL LDFLVSNVIMPLGSLVFLFFCTRKLGWGWKNFVAEANAGKGLRFPEKARGYVSYVLPLIV MFIFLFGLWEKFTG >gi|312956335|gb|AENW01000012.1| GENE 11 9672 - 10301 538 209 aa, chain - ## HITS:1 COG:lin2878 KEGG:ns NR:ns ## COG: lin2878 COG0546 # Protein_GI_number: 16801938 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Listeria innocua # 6 206 5 201 203 103 32.0 2e-22 MAIQHIIFDLDGTLMDTEKGNLYAWQKTLRYYVPWRTFSNTELKAILGVTTEKALTMLQV ENVDAAQFDEYWQLQYQTQVEHIALFSGMLEVLENLRHQGYTLGIVTSRDWQEYRAYFSS PSFDALFACIICKEDTLLHKPDPEPLLAYMRKMNAVKEDCIYIGDMDTDMECAARAGVSS ALAVWGTDGPVSQGCLSSPQQISAFVQNV >gi|312956335|gb|AENW01000012.1| GENE 12 10559 - 12445 2132 628 aa, chain - ## HITS:1 COG:lin2337_1 KEGG:ns NR:ns ## COG: lin2337_1 COG1902 # Protein_GI_number: 16801400 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 1 348 15 361 361 208 35.0 3e-53 MKLRNATFMAPMSLGYESSDGCVNERMQAYWLERARGGVGCIILDALSVDPSVPYLGNTL CFRGEEAIASYKAFTDKIHEAGACIIPQITHPGPESISAFMGIPPVASSVYVNSMGQKTR ALAIEELPNIIKQYAQTSLQAKQAGFDGIELHCAHAYMLLGSFLSPMRNKRCDAYGGSLD HRARLLFEVIDAIKEACGRDFPIVLRISGDEKDAQGNTVEDMCYLVPKLIAHGVDAFEVS GGTQYERPNKIIPSHGEHEGVNVAQAARIREVSSVPVLVVGKVLDPAMAMELVDQKAVDG VVFGRALLADPYLVNKAAEDKLEEIAPCTGCVIGCVGEQTKRHPASCVINPACGKELEMK LIPADKKKHVAVAGGGIAGMAAARVLALRGHTVTLFEKTDRLGGQLLLACVPPFKQPISK WVVYLEHELTRLSVDIRLHTEFCENMKDAYDALIVATGAMEAVPPIPGLAEHGIGAWEVL KNEQLIPGGNVLVVGGGMVGCEVCEHLLHNKRGPLYITMIEMTDEIAAGMVVNEKVLVMD RLHKAQVQLLTNARLEAVEAGTVKLNVHGEALERQDFTHVVYATGSRSNTALACALTDQD NVYVVGDAATVAQALEAVRDATLAAMAV >gi|312956335|gb|AENW01000012.1| GENE 13 12499 - 14427 2255 642 aa, chain - ## HITS:1 COG:AF1262_1 KEGG:ns NR:ns ## COG: AF1262_1 COG1902 # Protein_GI_number: 11498861 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Archaeoglobus fulgidus # 4 348 2 344 354 210 36.0 8e-54 MFEKLFEPIRIRGMEVKNRIVLPAMGTKMAAEDGNVTQQIIDYQVARVKGGCGLNLSEVC AVHAPSAPRKFLALHNDSYIPSHKAFCDAIHEAGGKCGVQLWQGSLAASMDPKARILVAS DLHVHGHTIPAVDVETIEEVVACFGAAAKRAVKAGYDCVEFHCGHNYLPHSFLSPAFNHR EDAYGGTFEKRCKFPLDCIRAIRQSIPRDMPLLMRLDAQDDYLENGLTIEDVIAFCRLAK EAGVDVLDISRGNMITAGLKYEVPPIDIPKGFNVDNCARIRRETGMLCIAVGRINTPQLA EEILEQNKADMVVMGRAQLADADFCVKAKEGRLQEIVYCIGCDQGCYDGFTDPAAPFITC MRNPYLGKEAQDVLVPAQKPKRVLIAGGGVAGLEAACILKQRGHQPVVYEASDELGGQFV TAGKAPRKMEMKDAALSYGEKAKRLGILIHLNTPVDASLITEGSWDEVILAIGAEPIHLS IPGADREHVYNSHDILNGKATASGHVAVIGGGLVGVETAEYLSEQGTAVTVIEMLDGVAK DLGALRKICVMESLYMHHIETVVNTSVKAVVENGVLVENEGVEQVIPCDSVVMAVGARAR DHEALTEACEKKQIPYHIIGDAKKARRALQAIAEAHETARSL >gi|312956335|gb|AENW01000012.1| GENE 14 14505 - 15686 1011 393 aa, chain - ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 293 389 158 254 257 63 32.0 9e-10 MQQQNDWYTGIDYFQSYKEQDIQVEEQSLAQPVPLTRHERVELWYVLKGDGDILVNGVLH TVQQDSFLCLYAHHLYEVSCVRKPLRVLRIQFYIGLFMHAMWEKHPRGRNASLVYETPAC LRCADSEVLQLFHRAQQESYGNAFGSRNMLMYIVLQIHMLFCRYALQESMEEEQSPVWKL IKRTIVASQEHTTLQDAAAKLQLHPRYLNQKIKDACGYSFTQLRSFGKIINACALLHFED LSISYIVDLLSYSSTAGFYRQFQAWTGMSPLDYQKHRILDNAHFYCRKDLYLQIMQYLNL HFSQDITLEDMARECHRKSYELEQLLKQEYHTSWTQELMAVRVHQAAALLTATKRTITSI AMDCGFSSLAVFERHFAACMGCTPEQYRKQQSV >gi|312956335|gb|AENW01000012.1| GENE 15 15864 - 16775 1087 303 aa, chain - ## HITS:1 COG:no KEGG:Ccel_0368 NR:ns ## KEGG: Ccel_0368 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 3 301 4 305 309 343 55.0 4e-93 MKDVTLVVLAAGMGSRYGGLKQIDPIGPNGEIILEMSAFDAIRAGFNKIVFIIKKAIEED FKKAIGNKIADHIKVEYVFQEMDACLPEGYEIPADRVKPWGTAHAILCCKNVIHEPFAVI NADDYYGIASFQKLHDYLVSNEDETAYSMVGFVLGNTLTDHGSVARGVCKVEDGKLAGVD ERTRIERREGKVQYYENDTWYDVDANSLVSMNMWGFTPKFMEEVEERFPTFLQETVKENP LKSEFYIPVTVDTLIREGKATVTVLSSDDKWYGVTYQEDKPMVKEGIRKLIEAGKYPVPL WSK >gi|312956335|gb|AENW01000012.1| GENE 16 16924 - 17376 227 150 aa, chain - ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 86 1 87 195 66 40.0 1e-11 MNLGNSLFHARKKSGLSQEEVAEKIGVSRQTISKWETNETVPDIYQSKKMAKLYRISLDE LIEFDIDLQEIEEMIDKSDEKLNEKVNWTNAWGKKYPILLKYQTEVNTSNYAFRITKMFD EIKNGYGYSKQDAMLVLKDILYQSYKIWNK >gi|312956335|gb|AENW01000012.1| GENE 17 17487 - 17924 108 145 aa, chain - ## HITS:1 COG:no KEGG:Ccur_08110 NR:ns ## KEGG: Ccur_08110 # Name: not_defined # Def: hypothetical protein # Organism: C.curtum # Pathway: not_defined # 7 145 67 205 205 193 75.0 2e-48 MSEHKNKKHTEVITLNTPLLECNFSFNQKFRDYFSVLTGVKSFKFTANMATAWRKVKGEN DIEFTIQDMINIYYGELDYAKYDNSVCQWNQFLKDFCLDKHSDYYSNKLKVASILWKEVR VSKNEKKYSRKLLTEYADKIEGYYK >gi|312956335|gb|AENW01000012.1| GENE 18 18268 - 18867 691 199 aa, chain - ## HITS:1 COG:no KEGG:Dalk_0727 NR:ns ## KEGG: Dalk_0727 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: D.alkenivorans # Pathway: not_defined # 5 185 12 202 208 68 24.0 1e-10 MKEKEMRRRPNQTEKTRRKIVEAIHVSMKEADLSDITIRSVCKKAGVSIGTFYLYFSCKE AALLYGYRQADEQFLALPLEEDAWGSIRKIMTCYLKMVTLEDMHAVRQIYICHIKYHDTY FFDEQRPIFQLLAAEVGKLVSETAVKDVTWGLLTTARGLIYHACCLKDEQIALDWHEKQL EELMDYLSYRVQKLQKGNT >gi|312956335|gb|AENW01000012.1| GENE 19 19071 - 20993 2170 640 aa, chain + ## HITS:1 COG:CAC3371_1 KEGG:ns NR:ns ## COG: CAC3371_1 COG1902 # Protein_GI_number: 15896613 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Clostridium acetobutylicum # 1 370 24 393 401 407 48.0 1e-113 MAPMAMGQLDDHWAYKQESIDHFTERARGGTGLIITGANFIENRIEKHRKASFPCPLEDP QSYMTQLKKMSDNIHAYNSKLFVQLTAGLGRSAIPAMILDNTFVAPSATTNRWDPSIQHR ALTTEEIYELIKDFATCAMLAKMGGADGIEVHAVHEGYLLDNFTMEYFNQREDEFGGDLM GRLRFPLAILQAVKQACGKDFPVILRFSLKSFIRAERHGILPGESYPELGRDIEEGLQFA KILTEAGYDALNVDAGSYDAWYWAHPPFFQDRGLYLPFAEKVKKVVKVPVLTAGRMGYPQ LAAEALQEGKCDMVVLGRPLLADPEFVNKMRQGNIQDIRPCLSCHDGCFNRAHSMRLMSC AVNPQCNREKEAAFCKAEHTKSCLVIGGGPAGMEAARVLALRGHTVTLVEKEKQLGGMYR WASVPEFKDDGKLLISWYEHQMERLKVQVELNSDVQAQDPRIEAADVVICATGSHAFLPP IKGIEYGVTAVDVLKGAVTAKKEATIIGGGLVGCELAIWLSQHGKSVRIIEMADTLMSTG APADMNKQMILELLEHHQVEIRLQTKLQEIREHEIVVETQGAIQELASDCTILALGYRSN RSLYDQILLKAKDIYNIGDSSHPKDIMEGIWDAYELCSHL >gi|312956335|gb|AENW01000012.1| GENE 20 21739 - 23016 867 425 aa, chain - ## HITS:1 COG:CAC2837 KEGG:ns NR:ns ## COG: CAC2837 COG2206 # Protein_GI_number: 15896092 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Clostridium acetobutylicum # 60 384 68 400 417 125 28.0 2e-28 MGTVAFTGGYMKVIEHKHVIPIIRNTLNALDARLVDHGYRVAFLMEQTLCHAGLFKGKEL RDIVMTCFLHDIGAYKTEEIEQLIQFETWDIYQHSVYGYLFLKNLSPLGPYADIILYHHI YYRKLRDHDIPYLLVSQLLSLCDRLDVYQLEKPLQNVEAFLRQFEEDYFSKEAIDLFLSA DAQCHMLDQLYVQHQEVKVAVFDEIPFTESEGKAYLHMLSYAIDFRSEYMVAHTITTTSV STTLAALCDYHPTEIEKVYYGALLHDIGKVAIPVTILDFPGRLSPQDMAVMQSHVTYSMK ILHGVVDEEIEHIAVRHHEKLNGKGYPLGLKEEALTTSERIVAIADIISALIGKRSYKEA YDLEKIKEILQEMAEGQYLDDRIVQIACDNLPHILQTVKRDCTPVIAMYQEIRRDYEHRI AQLDR >gi|312956335|gb|AENW01000012.1| GENE 21 23092 - 25257 2352 721 aa, chain - ## HITS:1 COG:lin2460 KEGG:ns NR:ns ## COG: lin2460 COG1511 # Protein_GI_number: 16801522 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 261 621 281 681 927 102 27.0 4e-21 MKKNVKAVTCAALSMLLVNSGMVLYAKDDETVKDETVYAMLNSDGSVDQEIVSSWLHNDN GIRNIKEQLDLSNVKNVKSDEKPEVSGKTYTWNADSNDIYYEGTSTKTLPVQVRVTYKLD GKEISGKDLIGKSGKLEIHISLKNTQSKTVNVNGRQTRIHPFYMGAGVLDLSTDHFSNVK CENGKVLSEGNNTMVAFISVPGLQDTLESCGVTGAKELPMQDDITITCEAKDFELGPIMF AMTPEVPVDKLKDINSMDDLTKGLDELTNASAQLLNGTSQLSEGTATFQGKMQELVNGVP TLTNGVSALKNGTQELVSGSTRLYSGLQNLHTGMNQAKKGTAKLNKATDGLGTLVSGVDE INTNMQALAKGLQDGSNELNASLSDEMLKNLTDGLGNVSALQEMFEKDQQHVAQAAADLE AALTSTDVDNAAGKLGETAEYLKKKAFNDKGEVVDAEAAQALKSLKSADDYLLNYKTQAT ASAVNLQKQLTQLQTDSANLKNLSDMADSAAEMLPKLSSFKASLNTASQGAQQLARGTQQ LSEKSSSLLELKKGISTLDSSMTTAVGGSSELYKGSQALVSGLQRVDQGAGALQSGSATI GNGAQQLYDASTLLKDKTGELHAGMSKFKTTGIDEMQKQVSLSLDDVTQLLAIKDEIVKE AEQEHTFSGAPKNSESKVKYIYKTEELQKEKKTDTQETKKTKEETKDDFFDKISNFFSKM F >gi|312956335|gb|AENW01000012.1| GENE 22 25271 - 27343 2277 690 aa, chain - ## HITS:1 COG:BH0720 KEGG:ns NR:ns ## COG: BH0720 COG1033 # Protein_GI_number: 15613283 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Bacillus halodurans # 1 689 1 681 687 291 31.0 4e-78 MKKLSDFIVKKRNLILLVAVLLLIPSVIGYARTKVNYDLLSYLPQDAESMIGQKSLSDDF NLASTGMLVVENMPDKNVSELKKEIKAIDGVKDVLWRDDVLDISIPKEILPKDVREMLYS DKGTLMVITFQEETSSQRTMDAIKTIKGYADRECYLGGFSAITEDTKDLMNEETPLYAVT AIILCMIVLFMGLESSIAPFVFVLGIVFPIVYNFGTNVFLGQISYITKALALVLQLGVTM DYSIFLLHRYQEEKKKSSDRDEAMSNAIQATFTSITSSSITTVAGFLALCAMQLTLGRDI GIVMAKGVVFGVLSTIIILPALLMLFDKYIEKWKHPILLKEPKKLPGFLTRHYKTILVVF VVIFIPMIYAQAHTNVYYDLNATMPEDFPSVIGTNKLKDQFHMTTTHFLLVDEKLENYEI KEICDSVEELPGVYSVVSYESLIGGGIPNELEPAAVKNILQNGGRKMILVNSTYRSATDE EDEQLNKIDTILHKYDKHAVIAGEGSLTRDLITTTDIDFKMVNILSVAAIFLIIAITFKS LALPVILVASIEFAICINMGIPFFTGTTLPFIASIVIGTIQLGATVDYAILMTTRYKEEL SNGSTVIEAAREAAAKSAPSIITSGLSFFAACIGVSFISKMDLIKSLCTLISRGAVISML SILLVLPAMLIIFHKLIEKTTKGWPKANLK >gi|312956335|gb|AENW01000012.1| GENE 23 27365 - 27961 711 198 aa, chain - ## HITS:1 COG:no KEGG:CLH_0731 NR:ns ## KEGG: CLH_0731 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: C.botulinum_E3 # Pathway: not_defined # 3 195 9 202 204 128 38.0 1e-28 MKNKVLLNKSEKKKRIEEAALALFSCNEVHQISIDQIAQKARVAKGTFYLYFHDKVQLIN HLIVKESSSIINDALLEAKRQRIDDKIDELIFLIDHVIAYFCRHPEVIKLIQKNLSWNLV GGKLKEDDNYEVAVHMNSYCDFLVTLGYTRSEAYQLLFMILELVSTLCYTAIVLHQPDDI EQLKPMLFTTIRKMIERS >gi|312956335|gb|AENW01000012.1| GENE 24 29402 - 32890 2541 1162 aa, chain - ## HITS:1 COG:CAP0160 KEGG:ns NR:ns ## COG: CAP0160 COG5492 # Protein_GI_number: 15004863 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 549 710 38 201 967 96 34.0 4e-19 MVDGETRDYMKKKMKWRKLALALALAVSCMPQSMKAQEVVEQKKALPFEITNIGVSSNTV KAKEAVTYTIDVQSEKPMSSRITIHLTAPITKKEKGVTMKYDGNGRYTGIFQTSEDEEDG IWRVDRIDAGLENGDRILVYNTVDLPSYAIYAYDFSPLDVTVTDSTGADITRPELHGISV LTKEVYPGSAIKYQFDASDDMSGIKRISITLHSPSGKALRKNVEYSQDQMVYELTIPTDS DLKEGNWTIYSVALWDYKMNFVNYINQPLLSSSYENMRYLDMSAQGFQVVPDPDVAQGLS NVFYITDSKSVNDYVYDGDLYVGENAFLTMKNVHVTGNVYVLGVLRSQGIQVDGTVFCKM STTGYNNTQGTFMLSGTNSIHSVQATNRPVAVVPVRIDQTLTASRNGDVALKGVSLPYIT IAVEGKEMQTDYRGRFDAGIVNIGEKDTVNITWKLPFGMPAENNIAVERETPVSLHMLTP PDKLEYITGEKVSLKGMRIEAVYADGSKRETTAYRVENTALTAGNHSITVSYHGAKTSFQ VIVKDIPVTSLKLNKQSATLHPDESVALQADIQPANATDKSIAWKSSNSAVASVDEKGRI TALKSGTAVISAVMKNGLRAECKITVKIAVDYVQLDSAYKDVYVTQTGQLNATVYPEDAT NKKVKWRSTNTSVVRVDQTGHYKALKSGFAYIYATSEDNEHIERFCEINVNVPPVEVNIQ ESSLNLKRGQSYQLNYTAYSPTGVDVAFKWESVDPKIASVNQKGVITALREGVISITLNS SYNNGGDMVLVTVTNPVSALKMNKASANMTKGSYLQLSASISPSDASNKGLTWTSSNKNI LTVSSSGKVYAKGFGTATITVQAKDGSKVKAASRIFSGYGISYVLNGGSNHKSNVSVYYN QAVKLYNPTRSGYSFKGWYSDSKYKTRVTSYKKGTKGNKKLYAKWSKNTYRITYKLNGGK NTKSNPSTYSVTSSISLKNPSRKGYSFKGWYSDSKYKNKVTSIKKRTGNLTLYAKWSATS YRITYKLNGGKNTKSNPSAFTINSTVSLKNPSRKGYSFKGWYSDSRYRTRIKTIKKGTTG NKTLYAKWSKNSYRITYKLNGGKNTKSNPAKYSITSSVKLKNPSRKGYRFTGWYTDAACK KKVTAIKKGTTGNKTFYAGWRK >gi|312956335|gb|AENW01000012.1| GENE 25 33218 - 34024 996 268 aa, chain - ## HITS:1 COG:TM1742 KEGG:ns NR:ns ## COG: TM1742 COG0647 # Protein_GI_number: 15644488 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Thermotoga maritima # 12 266 2 256 259 231 42.0 9e-61 MIRDKKQIQEAMKPIRAFILDMDGTIYLGNALFPYTRSFLDTVKQSGRAYYFFTNNSSKD VKTYIDKLHSMGIDIEQRQMMISTHVILRWLKEHHAGKRVYVVGTPALQAEFQHHGWQLD EEHPDIVVLGFDTTLTYDKLSKACHFIREGAAYYGINPDLNCPMENDTFIPDCGSMARLI EASTGRYPEFFGKPSPKTLEYIIKETGLDANQIAIIGDRLYTDIAVADHSAVTSILVMSG ETKEADIEKSEVTPDIVIEDIGELAKLL >gi|312956335|gb|AENW01000012.1| GENE 26 34055 - 34750 867 231 aa, chain - ## HITS:1 COG:BH1871 KEGG:ns NR:ns ## COG: BH1871 COG0235 # Protein_GI_number: 15614434 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Bacillus halodurans # 1 231 1 228 231 312 65.0 4e-85 MLEELKQRVLEANLLLPKHGLITFTWGNVSGIDREMGIVAIKPSGVEYDHMTAQDIVLCD LDGNVVEGKLKPSSDLMTHLAFYKSFPNVGGAVHTHSRWATAFAQAGRAIPALGTTQADY FYGDIPCTRLMSEAEIHGEYELETGHVIVETFTKGNLNPDTMPGVLVHSHGPFAWGKDPF EAVHNAVVMEECAAMAFVSIMLQDNAVQPMQQVLLDKHFKRKHGPNAYYGQ >gi|312956335|gb|AENW01000012.1| GENE 27 34759 - 36048 1435 429 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 12 305 15 313 399 186 37.0 1e-46 MNINVQKFRKPCACGRTHEIVVDDMIIEKGAIQRLPHIMKTYYSEYKTIAMLCDDNTYAA AGKLVEELLPGIITIRLNPENLHADEHGVEAAQKQLDKYAGIDFLIAAGSGTIHDITRYH AYEKKLPFLSIPTAASVDGYVSTVAAMTWHGFKKSFTAVSPRFVLADSEIFSKAPLRLTA SGVADLLGKFTALCDWRIAHALTGEYICDTVVDMEYKVLKELCENLDGIRNHDLSAYENL MYGLLLSGIAMQMIGNSRPASGAEHHMSHLWEMSAINEPIDYYHGEKVGVGLCMATAVYK KAEQKLRAGGYQVKDHMELETEFIKANITSPVLQEEILKENTPNLMADITGNMLKEKEAD ILTILADLPDAQTMIGWMKKVHGLTTMQELTLDEALKTTTQRLSPYVRQRLTFMRLLKFY DFYDEITEG >gi|312956335|gb|AENW01000012.1| GENE 28 36052 - 37467 1921 471 aa, chain - ## HITS:1 COG:SA0238 KEGG:ns NR:ns ## COG: SA0238 COG3775 # Protein_GI_number: 15925950 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Staphylococcus aureus N315 # 5 426 6 415 419 215 34.0 2e-55 MVILEFLKSMIDNFGAAIIVPVIIGIIALFFRVKPQKAFLSALYAGVSLEGISLMVGAFT PIITPLVKNMADAMVNITGVNLNVFDVGWQATSLVAFSTSAGMIYLGLGIVLQTVLFLIK WTKCFQPSDLWNNYSYMVWGAMVIFATDNFALGIACMVLLNLYSLLISDMLAKRWSTYYQ YPNCTIIAMHNIEPGIFAIVFDPILNAIGFNKLKLNPQTIQQKIGFMGEPMTIGFVLGGI IGILGNLSNLGSMAGWGSVLTAAVATAAVMAIFPKITGFFAQAFAPITEGARKFMGNTGD REWYIAVNDAVGYGEPATLTCGLLLMPVMVLIAFFLPGNQTLPVVDLVAIPYMVEGLVAV FNGNMAKVIVTGAIWFSVGLLMCTYTAPLFTEVAKGAGYAIPAGAAMITSFNILGKPLMG LIFLAFLSGSPLWIGVAVAAYVVCYAGYRMKQKNVEEYLETQAMKNAEAEA >gi|312956335|gb|AENW01000012.1| GENE 29 37518 - 37820 521 100 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0542 NR:ns ## KEGG: Cbei_0542 # Name: not_defined # Def: PTS system, galactitol-specific IIB component, putative # Organism: C.beijerinckii # Pathway: Galactose metabolism [PATH:cbe00052]; Phosphotransferase system (PTS) [PATH:cbe02060] # 1 100 1 100 100 141 68.0 7e-33 MKSVNILSICGSGTVTSSMVAAKLKDRLSEHGYQVSATEAKPTEALNLAQSKRFDIIAHT SPLPKGDYGIPCVNAFACITGMGEDKFFEDFLKALQSIGK >gi|312956335|gb|AENW01000012.1| GENE 30 37817 - 38299 557 160 aa, chain - ## HITS:1 COG:lin2202 KEGG:ns NR:ns ## COG: lin2202 COG1762 # Protein_GI_number: 16801267 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 1 151 1 152 155 88 31.0 5e-18 MIWEDLDKKLIHLQAEAGHANDIFDQLGTCFINEGYSRSDYVEALKQREAQFPTGLDING FGVAIPHTDAGYVLHETEGIMTLKHPVTFIQMGSDDTQVEVKVVFMLAIEDPKNHIKKLQ QILRIIQDNAVLEKIYQASSADEVIDIVKQKEIEIGGENL >gi|312956335|gb|AENW01000012.1| GENE 31 38541 - 39233 651 230 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQHYTILIIDDKREQAKEIKKKIEALHPAFHADIANDASYALKGTYDAYLSDLMMPVHSG IEIGNMIYKENPDAIIILMSSLDNFAIERTQQFSAFTFLPKSKLDQELLPLLQRLERRLN YINIRIHVKEGEKSIAVPIYKIHKVSVIKKQLCLDMGNTRYTCSMRFQDFQRIYDDYFVC PKNGLLINPSCGYYYEAGHTLQLKEESIRVSLLKRKEFKEKYQKYYDSLM >gi|312956335|gb|AENW01000012.1| GENE 32 39426 - 39593 164 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRTYTLLIVDDQAAAAEQLRSGIEGISPGVFDIAVMNDVQAIQQIFHQIAFYTLK >gi|312956335|gb|AENW01000012.1| GENE 33 39971 - 40207 236 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNFKKIVLPFLLLCSLGTLAISMVFLWTSGIALDEMISVTEYFDSYGMLYWLLLLISIL SSLSCIILLVAGNRSVQK >gi|312956335|gb|AENW01000012.1| GENE 34 40277 - 41104 907 275 aa, chain - ## HITS:1 COG:rhaD KEGG:ns NR:ns ## COG: rhaD COG0235 # Protein_GI_number: 16131742 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 23 266 24 266 274 225 43.0 7e-59 MRVEETSFLNEYIAMADYGDRLGWHERNGGNFTYWMKPENVADVKDELHDKGEWLPIGTN VDNLANEYFLISGTGKYFHNMKKDSRHTIGIIQVDSTGTKYRIRWGLENGGRPTSELPTH LMNMAVKAKLTNNENRVIYHCHCPNVIALTFLLPLKSEIITREIWEMMTECPIIFPEGIG VVEWMVPGGREIAVATSRLMETYNAVIWAHHGMFCSGVDFDSTFGLMHTIEKSAEMWIKV HSCRQDKLQTIPVEGFRDLQEAFQVTLDERFLYKK >gi|312956335|gb|AENW01000012.1| GENE 35 41213 - 42241 1278 342 aa, chain - ## HITS:1 COG:PAB0514 KEGG:ns NR:ns ## COG: PAB0514 COG0111 # Protein_GI_number: 14520969 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Pyrococcus abyssi # 56 321 30 293 307 185 40.0 1e-46 MKCVAVGDMFLSEEAFARVLKHQALFCSYQGFSWKADLDRVSTRTLIRKIETKGSEAYAV EGELKEAMLDADVIFVHMCPVGKDIIEQAPHLKYIVTARGGVENIAVESAKKKGIRVIHC PMHNAFAVAELTVGLMICETRNVTRADRSLREGIWRESYPNTGSIRELRSMTVGLIGFGA IGQLVAQRLQPFGCSIMVHDPYLDASVIERLGCIAVDKKTLLQESDIVSLHGRIGPNDPP IIGREELKLMKPVSYLINTARAVLVDMPALEEALQNGSIMGAAIDVFPKEPLTKEDAVVQ LDNCTLTNHRGGDTLDSYERSPELLLEQLQEAVQTGHTKYMI >gi|312956335|gb|AENW01000012.1| GENE 36 42398 - 43174 815 258 aa, chain + ## HITS:1 COG:CAC2966 KEGG:ns NR:ns ## COG: CAC2966 COG1349 # Protein_GI_number: 15896219 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 3 249 5 250 254 124 30.0 1e-28 MTKQERQKAILALLQEKGELHVQTICRSFHIVAMTARRDLMELEQMGALIRTHGGAIAKE KKTFDAQTPFAKRRKLHTEKKRQLAHIARGFLKEHDRIFLASGSTMDMFASALLHYLPLT VVTDAVNVAYELYQDSRLTIFMLGGELRSNSLTLTGPIAQTNLKQFQLSKAFLSVNAIDE KGNLYTDSVVESGLLETLFSIVEEVYVLCDSSKLNSRDFIAISHEQSYTLITDQDADESL LEAYRQCGIRVVKAAPQI >gi|312956335|gb|AENW01000012.1| GENE 37 43309 - 43773 504 154 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKKLLPCAALMAACLAVSMPIGAKENPEPWSNTLSQSEEHVIKETGIDKRFDIGKAVSV KLDSAYVTKDTKVQLTENSLYKKVGKLIPAPFHFRSVTITKKSGKLIEFPDTLQFQENSG SLSLHGQLQCIEINRMDITGDTMAATYTGVLLAE >gi|312956335|gb|AENW01000012.1| GENE 38 43896 - 45953 2246 685 aa, chain - ## HITS:1 COG:BS_yjdC_1 KEGG:ns NR:ns ## COG: BS_yjdC_1 COG3711 # Protein_GI_number: 16078265 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 465 4 480 510 120 26.0 7e-27 MNKRAREIIFWIMEKRDYQETCTINDLMDKFKVSERTIRYDLEGITDFLLENKQKPIQLC EHGVIELQKDTDAIRMLLGQNDFYSFKLSKEERMHMILYLIANTGEHVTLQQLADILFVS RSTIIHDVDDVRKSIQKQDLEIVSLRRGLRIQGRESSRRIMLMHLLRLPYVQQYRISEYK DMMSPQDLESLKRMIKDAEISSSRFLTDGSFEDLRQYLMLMIERYHKHRFVEIDYVSQHL STQKMASHLMNKMEDYFGMEHRLQEEYLLADILYNMHYLKRNDADEKIMQIQVISKQFID AVAHDLNIDLRNDFQFYQNLTNHLQSTFKDLDMGYDSDNELLYEIVKKNPEVVAAIEKNL QPLELFVQRAITREEIAYITIHVCAAMERNRYQGAQFTILLVCNSGVGTSQLLLSRLKKY FQFYVADVLPVHALANYDVTGIDLIISTVPLKEERCETIILHPYLSDEDCILLGEKLETL KSGMHRVNSNPNFQRLQTLIANSIAISPLDKDEIYKNIIRDLQSHFFPIAPSDKATLREL LAGHIEVDVECADWKEAVRRSAQPLLEQDYLSEQYITQMIRNIETMGPYIVLAQGFALPH ESPDVGGRKLGMQLIRLKHPVPFHSQFYDPVDFVCCLSTIDKDSHLKAMFHLMNLLSKAD FCENIRKAKTAEEVYQIIYEYESIL >gi|312956335|gb|AENW01000012.1| GENE 39 46096 - 46974 964 292 aa, chain + ## HITS:1 COG:CAC2472 KEGG:ns NR:ns ## COG: CAC2472 COG0596 # Protein_GI_number: 15895737 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 1 248 1 249 250 181 39.0 1e-45 MQFKTYVQKNKPVYMYIHGECLSAFSFQEEIRELKKDYTLIVPVLDGHGSEAQKPFISIQ QCAEELLTYLQEYYNGHIQVLSGFSLGAQIAVSMLSMKPDLCEYAMIESAMMQPIKLQSW SAYAGIYTNALARKKWFNKFMYYTVFNDDFAFEDYYQNYQAMTKENLKSIHHAVSTFQLP ENLAQATCKTAILVGQREKKSMKKSADLLKEVLGDAQIFMLMNYTHGDFSLGNPREYLRF VKSWIQNKDIQQKRKVRKQKEQQEGDYLPNWKHLVNKIKNKKAKKKLQKAGS >gi|312956335|gb|AENW01000012.1| GENE 40 47040 - 47483 415 147 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKILLLCLVFLCLGSFTACRKAGNTATADGQEQILEESEFSKLVKDGNILKVSSKDTDI TVKLGSVPKDLVVSGELLDASGKPLYHHVVKISFQEKDGNIVFQNEALLLSAVSSDSDIL KKSLLAYRIHSESENMDWHLLVQLQDV >gi|312956335|gb|AENW01000012.1| GENE 41 47652 - 49565 1413 637 aa, chain - ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 5 507 4 500 505 159 24.0 1e-38 MKRKQEDLIRYLYEHEEKLTSETLSKALSLSIRTIKSYIAELNLSYPGLILSSNRGYTIH KQKASVLLQYKDDIPQDYEGRCIYLIKKLLLEKQHQLDIFDLCDELFISYSTLKNDIYKM NTSFAHFQITFSCVDNKIDIRGTEKNKRRLITHVMSEEASGNFLDLSFLQESFPAYDIEE ACILIKQVFHKYHYYINDFSFINLILHVTIMISRMHSGNHIPGNREYHSIDGLKEKPIID ELCMTLEQIFDVTFTSSEKFEIYILFKTNANYHAQDQMEELSKVVSEDILSLSHQLIQSI DRHFFVNLMSDSFLTPFALHLKNLKNRLEQHSIMKNPMLESIKISCPTIYDIATFMAYQL MQTFQQEISEDEIAFLALHVGTEIERQKKAETRVSCVILCPEYLNIGKLLYNKMLMDFGE QINIQKLISFERAIEHEVFDLLITTIPLPESPEYLTVLLPPLPMNYDKNKIMKAITRIEN TKKSRILADNIDFYFNEDLFYFKEKPTGKEETINELADQMISLGYVHADFKDEVWKRERA SSTAFMNIAIPHPMKMSAYKTSVAVVVCPKGMEWTNQHIVNVVFMIAFNKIDNKHFHDLY ESLILLFNKQEVIAEIKKCRNFEDFKQIVIKNYIKYS >gi|312956335|gb|AENW01000012.1| GENE 42 49754 - 50077 461 107 aa, chain + ## HITS:1 COG:BBB06 KEGG:ns NR:ns ## COG: BBB06 COG1440 # Protein_GI_number: 11497017 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Borrelia burgdorferi # 4 102 1 99 105 73 32.0 9e-14 MAQLHIYLCCGGGLSSGFLAQKARAAAKKSKVNATIEAKSESEVTQYLSKMDILCIGPHY EFRLKAFEDMAAPYNIPVIVIPEEIYSMLDGKALLQLAVDTLEKYKV >gi|312956335|gb|AENW01000012.1| GENE 43 50100 - 51386 1232 428 aa, chain + ## HITS:1 COG:lin2459 KEGG:ns NR:ns ## COG: lin2459 COG1455 # Protein_GI_number: 16801521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 418 1 419 433 139 29.0 8e-33 MNQIMSWFTDKLAPGMQKIFSNPWVGAVASAMQKILPFILVGSVVSIYNVFVRYIPSLPD MSFVNTFSFGMMSLIVSFMVAYFGMVELDHPKYTITAGLTSLTVFLMALCPTMATLVKNA ATGKTELTITDINFLGGSGLFIAIIVALIVMVIFHFYAKLHVLENSASMPDFVCEWINNI IPMTLIYLVFGITVFTLGFDLVGFINMVFQPIVDIGQSLPGFVIICFLYVLLYSVGISAW SLNAIVKPILMAGIAANAELALAGGQPIHIVTTETIFTTALIAMGGLGGTLPLNFLMLFK CKSKKLKTMGKICLAPSVFNINEPLVYGAPIVFNPLLMIPMWMNSVVGALIIWFIMRAGF LNIPAGVNNISRIPAPICTWLTTDDYRAFFWFFILFAIYALIWYPFLMKYDKQLVKEEQE KETVKKPL >gi|312956335|gb|AENW01000012.1| GENE 44 51402 - 51740 393 112 aa, chain + ## HITS:1 COG:BS_licA KEGG:ns NR:ns ## COG: BS_licA COG1447 # Protein_GI_number: 16080908 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Bacillus subtilis # 4 109 2 107 110 70 38.0 9e-13 MDENNRLIPVSMSIIMHAGNARTKANEALDGIASFDFERAKEKIREAREDIIRAHQGQTE IIQAEAAGEQYTSCLLFTHAQDTLMTIMSEVNLTEKMITIFENFYTGRGTVK >gi|312956335|gb|AENW01000012.1| GENE 45 51798 - 53219 1393 473 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 5 470 7 478 483 451 47.0 1e-126 MQDSFSKDFLWGAAISAKQAEGDSDRALTVADLQNYDPHDKAKVKGDLSLQEIMDRIEHP QDYIFPKKTGIDFYHRFRDDIKLLKDMGIKCFRFSVSWARIYPDGAEEKPSEKGLLFYDQ LLDILKEMDIEPIVTLYHDDMPVDLALKYNGFLHPRVVDLFVEYAALIMKRYQHKVTYWI PVNQINLTRVGLSSIGVIKDTVEDVEAVKWQGVHHKFIACAKIREIGRTINAAFRFGAML ADFYVSPMTCKPEDVVFATEKNQMTMFFFADVQLRGEYPGYALRYFKDNSIAIHADENEL TLLKNNTLDFLAISYYNSNVVSYEKNTMAIGNAELNPYLKANPWGWTINPLGLYDCFLNY WDRYGKPLMIAENGFGQIEELDSEHKLHDDYRIDYIKEHIRALQKAVQHGVDVFAYCAWS PIDMVSSGTSEMKKRYGFIYNDQDDAGHGTQKRYPKDSYWWYRNVIATNGNVF >gi|312956335|gb|AENW01000012.1| GENE 46 53412 - 54923 1296 503 aa, chain + ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 6 496 1 493 498 222 31.0 1e-57 MRYRDISIRKKILLSNFLMVLIPIIFVCFILFSLLLGFSFVTHSPAALIRNVLLNTSNYG PTLLIKTMNDELAGSEHITDEAKRILAQLEKSGLHIFVEEAHDQKAEVLYHSSGVNRKSM QKEFESIAETKQYELPYIIWNANGMAYQAELKNAADKTLRITFSGKDLTFPQDSYESWEH TKLMIKITIVATGVFMVLFIVALGAVLTRKLAQHILIPLYDLNQATSEIRSGNLKQEISV EKEDEIGELCSNFEAMRKQLIESEKLRSQYDLNRKELIAGISHDLSTPLTSMQGYVNGLL DGIADTPEKQQHYLHIIQEKTNAMNALVESLFLLSKLDLGQVPFHDECVNLADFLQDWYQ ECASRYEHASIKLTVKCPQPVQVLMDRTHFIRVLDNLCQNSIKYRSENPVHIDVTLECDK KECILTFQDNGIGIDPSQAPRLFDSFYRSDPARSSKVKGNGLGLSITKQIITQMKGEISA SGELNKGLCITIRLPLLQGGTTL >gi|312956335|gb|AENW01000012.1| GENE 47 54920 - 55612 1058 230 aa, chain + ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 228 1 229 230 269 57.0 3e-72 MKRILIVEDDRAIAELERDYLEANDYEVEICEDGESGLKRALQEDFALILLDVMLPKEDG FQVCRNLRASKNVPIILVSAKREDMDKIRGLGLGANDYIVKPFNPSELIARVKSQIANYE RLTQGAQKKENLLQIENLMIDLNSHEVFLDGESLVLPNKEFELLVFLAKNPNIVFSKDQL FEKIWGLDAIGEISTVTVHINRIREKIEKDSANPKFIETVWGSGYRFRKY >gi|312956335|gb|AENW01000012.1| GENE 48 56098 - 57402 1427 434 aa, chain - ## HITS:1 COG:CAC1456 KEGG:ns NR:ns ## COG: CAC1456 COG1653 # Protein_GI_number: 15894735 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 24 432 30 437 439 414 48.0 1e-115 MKRRLLITLVLLLLCIGGIGWFSYMQQKTVVLKFGMFAGSNWDVPNGDSYKIIDQAIERF EKAHPNVRVEYVSGLQKADYSEWLSQQALEGDLPDVYMVLSDDLYTFADIGMLEELDSYI QRDEKLTVKNYFTPALKSGQMNGRQYALPYESVPTMMYVNKTLLDKFGIALPDNNWTWDD FYTICEKVTLDSDHDGSLDTFGVYGYGWQNALASNDATIFNASGTSATLANNKVYEAVEF TRKLEELNKGQSVNSAMFDKGMVAFCPMKFSEYRTYKPYPWRVKKYTNFEWDCIPMPAGP EGDNVSQLDTLSMGISASSSHKKLAWEFLKSLCYDTTAQKDIFKYSQGVSVLKDITGSKQ VMEYLLKDAPGDSTFNMDFFNDTMEHAIPNTKFTDYDQVISVADSEIRRLLGTDEDIKTS INTLQTKIDLILKK >gi|312956335|gb|AENW01000012.1| GENE 49 57399 - 58076 887 225 aa, chain - ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 215 1 214 225 259 58.0 4e-69 MIKIMIADDQELIRESLKIILSTKEEFKVIATVGSGKEVIEAIRREQPDVILMDMRMPDM DGVHCTKFVKEVYPDVKVIVLTTFDDDEYVYSALKYGASGYLLKGVSLDELSNAIKTVLQ GGAIFNPNVASKAIRIFSQMAKNNVVTEKFQSQDDLPTLSNTEWKIIQQVAQGLSNKEIA EILKFTEGTIRNYLSVILDKLELRDRTQLAIWYIHREKAEQDDNG >gi|312956335|gb|AENW01000012.1| GENE 50 58076 - 59383 1411 435 aa, chain - ## HITS:1 COG:CAC1454 KEGG:ns NR:ns ## COG: CAC1454 COG4585 # Protein_GI_number: 15894733 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 8 434 3 438 441 327 42.0 2e-89 MWFMKWSNDEKLKAIHWMMCFLNLTIILFISVIMYITTLRICDMYEARTFLSTLPCLPSN PLRIMITSVACFPILLFVMRLRHQIQLTTWKLAGSFLLETCLCLIIMQSLSFSTNSILLL VMADLLTYISTNRERALCLAVMIVIYLCANYDFLSGRFAIVSFNDYLACYNSMTQSVLSS IHNTLASLNIIMFILYMIFLVQEKINESKKFLQMNQELQDLNEQLKEYANIREKMGATRE RNRLAREIHDTLGHTLTGLSVGIDACVLMSEIDPSATKNQLSTLAETARNGLKDVRRSVD KLRPDALEHYTLKEALDKMIQEFQGVTDVVIHFVCHLPHLTFDKDEEEVIYRIIQEGMTN AVRHGKAKEIFISIAKENDTLILIIEDDGIGCENIKPDFGLHHMQERIALLQGDIRFYGS NGFVILAEIPIREGI >gi|312956335|gb|AENW01000012.1| GENE 51 59386 - 60363 1257 325 aa, chain - ## HITS:1 COG:CAC1453 KEGG:ns NR:ns ## COG: CAC1453 COG1879 # Protein_GI_number: 15894732 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 1 325 1 325 325 281 45.0 2e-75 MSKLKVSIRSIVMFLFALMFVVAGLSLLSRYTSEQFIYRSKKPLKIGATYMTLNNPFFNV IDDEVRNVVEANGDVLISLDPALDLQKQKEQIHYLIEQGVSALIINPVDFTGLSEELKEA REANIPVITVDTDVFDEDLVAYSLMSDNYDAGVQCAKDMMKRKKSADIVLLQHSTAYSAV QRIQGFVDTIKDKPQYRVVERIECEGQLEIAMPKMDAFLNKDISFDVVMALNDPSALGAL AAMQDKDRLQSVLVYGVDGSPETKALIKDHIMTASVSQSPKTMGKDAAEIVYKILENKPY SSKARIPVTLINENNIDQFSLEGWQ >gi|312956335|gb|AENW01000012.1| GENE 52 60820 - 61278 237 152 aa, chain - ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 1 147 5 151 154 73 29.0 2e-13 MRRTDRETTREEAWRIFDQSAYSVLSMSYRNRPYATALSVARIDETLYFHCARDGEKIRA MRENPNVCLHSVARMENCAEGFTVYYASCTIRGIAQEVVDEEERHRALLALCRTFIPQSM DMAEQEIRDLRSVTAVWSITVQEITGKRNAEK >gi|312956335|gb|AENW01000012.1| GENE 53 61409 - 61729 394 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMVMFGKQKARLHGYESYGRIIKIEDGFYLYRGLPSKYVTVEYHVNQQRYEVRQLIYSIL PAHEKKLKLQERLRIKISEDNPKNAYVSEFDEPQYKLWYYVDKANK >gi|312956335|gb|AENW01000012.1| GENE 54 61785 - 61982 127 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDSCLKICAVKEIIKADYCKLLSHKAFMGITKSNRKRTFFQFEVTDKGMDAYDRFASVSL AVDTV >gi|312956335|gb|AENW01000012.1| GENE 55 62043 - 62501 421 152 aa, chain - ## HITS:1 COG:no KEGG:CPF_1302 NR:ns ## KEGG: CPF_1302 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 15 151 14 149 149 85 39.0 5e-16 MKKFIRLCGIAACTLLLLTGCSSKYERDDEPGRVENITVAKMQEMVDKKESFAIVFTQTT CSHCIEFKKMLDGYLLDHNVVLYDVVLDEAPASQRKSDLNTIRKTFPGMNETPSLYYVKE GKLENLLENGDDGLTEEKFDSWVQRYKLDEKK >gi|312956335|gb|AENW01000012.1| GENE 56 62586 - 62813 351 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDTRLAERLFVLITSNMDRTYEEECNMAMDVFLEEEFDMGELKRMLLYLLDKVKADRREM VKEKIEQQIGSLHEQ >gi|312956335|gb|AENW01000012.1| GENE 57 62942 - 63529 739 195 aa, chain + ## HITS:1 COG:CAC1777 KEGG:ns NR:ns ## COG: CAC1777 COG1051 # Protein_GI_number: 15895053 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Clostridium acetobutylicum # 8 142 8 151 307 132 50.0 5e-31 MIKKQPVNAKGQTEEEFLKAYDAGRYPCPALSVDMLIFSKYENRLKLLLIRRKNHPYIQQ WALPGGFLNIGEDILDAAYRELKEETSIERNQVQLYQLHTYGAVHRDPRMRVVSVAHVAL INQDVKVEAKDDADDAAWFEVQINDNTLTLYHAQHRMQYHMKTARSVNPDQEALAFDHIQ MILDALHSLTLLPII >gi|312956335|gb|AENW01000012.1| GENE 58 63952 - 65022 1045 356 aa, chain - ## HITS:1 COG:MT1495 KEGG:ns NR:ns ## COG: MT1495 COG0176 # Protein_GI_number: 15840907 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Mycobacterium tuberculosis CDC1551 # 31 201 39 207 373 68 28.0 2e-11 MSKLIEMREKYPQTELWTDSFHTADHAYGLTQGITGITTSPTWVSRMLCNEEGSEHEKVL CELQGKHPEYNEQEMIWAWTLEMGKRRSRVLLPLWEQGNPKQGRFSIQTSIYDYSNTEKM VRMAEEVNSCGPNMQVKIPSTKEGIKAMEEATFKGISVMATVCFSVDQAVAAAEAIERGM KRRTAQGLSNADLNPVCAILLGMQEDWLKSYAESRDIVIHPDAFAWCGVAICKEVYRIFQ ERGYKTRVLTAYYRHQLHWSEFIGGDIIMTIPAKWQKRFANCDVEIRDYMSEAVAADKLK QLIKLTPFVQAYTQGSLTEDDFNSFGPVILTIRYFTEEYEKAVHKVRDILLPNPIR >gi|312956335|gb|AENW01000012.1| GENE 59 65257 - 66036 682 259 aa, chain + ## HITS:1 COG:BH0801 KEGG:ns NR:ns ## COG: BH0801 COG1349 # Protein_GI_number: 15613364 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 2 232 7 238 259 133 33.0 4e-31 MAKTTQQRRNEIYRIIVSKGSARVSELAEQLQVTTETIRKDLNSMDEQGIIIKNHGGAEI KNTYYQLPLDVKMSEHVYEKQLIARRALDFIQDNTVLFLDPGSTILYLAKYLRLRKGLTV VTNSLAIASMVSETTHQLMIAGGLLQKQGKAAIGGFTNSMIDAIHIDTAFMGCDGFLDSF GPATFSHEEMEVKQHVLRKAQQRILLCDSSKFRKSSSYTFARWSDYDVLITDQITEQEQH MVKEVRQLICVSDEDYEFL >gi|312956335|gb|AENW01000012.1| GENE 60 66286 - 66723 389 145 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNSWFNMQLYDAEELEDSVLFTLKKDVFQEHFLSFLMEQTQIMHDFDAEEIKEEVEALK SRSLPDYMKWIKENRMPSCLWYGKCTIVSPLYCSEKLYMSADGVDYLVEGKAVMECYDSL FTYIHNMIRKTSANPLKDTVAVLLD >gi|312956335|gb|AENW01000012.1| GENE 61 67120 - 68028 611 302 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 9 264 11 263 302 174 36.0 2e-43 MVAIHLSTIQRYSTKDGPGIRSTVFLIGCNLRCAWCSNPELMLPYNKLLHFSSLCRGCQS CVHAYPAAVYMEDGAIHMHPCAQHMAGELEEVCPFDALEQVGMQVECQQLVKQLEKDFTY YEESGGGVTFSGGEPLLQAEALADTLCLLKQKHIATCVDTAGDVAWEHMERAAQYCDLFL YDIKAFDAALHKKITGADNGRILDNAGRLAAMHKPMWIRMVIVKGYNDDRRDLRKRLQFV ASLGSAVQRVELLPYHALGEGKYKSMELAYPIQEDACPDAETLAYCMEEGRRLNLPMYME KA >gi|312956335|gb|AENW01000012.1| GENE 62 68022 - 70442 2384 806 aa, chain - ## HITS:1 COG:SP0251 KEGG:ns NR:ns ## COG: SP0251 COG1882 # Protein_GI_number: 15900186 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 17 805 21 811 812 561 38.0 1e-159 MKDFLFYTPAASGVDWKRIDSLRHVMEKRTASICSQRALLYTQSFQESEGEPYIIRKAKA FAHTLAHMDIYIQPHSLIFGNQASANFAAPIFPEYSIQWVIDELEAFDQRSGDVFQISEE VKQDLKRIAPYWLQHTHEDEVNAHLSENIRLAEKQGVLHRGGISMSGDGHIVPDHEMLLQ RGFRSIIDEAKHALTNTDLQDAQRNYYQAVIISLEGALLFFQRFAKLAEEMAEHEQDEKR RQELRVIAHMAGTMMEQGARSFYEGVEVCYMVHVLQMIESNGHSFCYGRFDQYMRKLYEQ DVERGVLTKDQALEIITHMFIMNSSCNKVRPYGHTKYSQGYPLYSNLVVGGKTPQGSDGT NELSYLCIEAMHLTSLAEPNFSVRYHLETPRQFLKAAALLIRTGCGMPSMFNDEVAAKGI EDLAIPKKDALDYCPIGCVETGVPGKYGHRATGMTYVNWGKVLEILLHNGVDPASGIQML SVNGQGGDAVTFESYEELWQGWEKLLKFYSDISVECDAICDDSLVKYDADPFASCFIQDS MKLGKTLKEGGCRYDVISQSNIGPCVVGNALYAIKKLVFEEQSVTWEELMTAMQDNWQSL ESARIHKKIRHVAKFGNDDDAVDEIVKDVFDSYLKLLPQYRTQRYQQGPAVSCYTMSTSN ITSYVPNGFVVGATPDGRFAGTPLNEGCSPTQGTDTNGPTAVINSVAKLPNEQVAAGQLL NMRFSSGALAGEENLDKFVDFLMASAKKHIYHNQFNVIDSATLRLAQEHPQDYTDLIVRV AGYCAQFVSLMPEAQEAIIARTENTW >gi|312956335|gb|AENW01000012.1| GENE 63 70804 - 72084 1059 426 aa, chain - ## HITS:1 COG:BS_ydhP KEGG:ns NR:ns ## COG: BS_ydhP COG2723 # Protein_GI_number: 16077651 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus subtilis # 6 426 10 429 465 320 39.0 2e-87 MIRTIPEDFLIGTSSSAWQIEGVAGKSKEQKSWAELFYASAPEKWHNGIGPEKAADFYHR YKEDIHTMASLHMKAFRFTIQWARFMKDPIAGIVDEEAAAYYLDVIKTIRKEGMEPLISL EHWDLPAVLIERFNGWAGRETLDCYIIYVKEVLRRFADQVTWWFAFTEPNIPIDNGYMDA IWYPFTHDPKTAYQAHFHKILATSYAVACIEQYRSYGCRMGAMVHMTPVYAKSGEIQDVT AAWYADLFHVRLYLDPYLKGEFPAELLHQLKLHDCMFTYKEEDLQHIRAHRIAMLGIDYY FPIRVQARSHPYSGPFHPKQFYEPWIKEDRKFNADRGWEVYEQAVYDIGMRLKNEYGNPD WLISENGIGIAHEERYRNEQGSIDDDYRIDFLSEHLRYALKAREAGCHCHGYLVWSYIDN VSAINA >gi|312956335|gb|AENW01000012.1| GENE 64 72673 - 73716 1097 347 aa, chain - ## HITS:1 COG:BS_yjdD_2 KEGG:ns NR:ns ## COG: BS_yjdD_2 COG1299 # Protein_GI_number: 16078266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Bacillus subtilis # 8 343 8 346 367 226 43.0 5e-59 MKTIWKDIQKHLLSGVSFMMPVVVAGGVILAVSLLGATQTETGLVPNGPLLTYLNQLGKA GMAMMIPVFAAYISYSVAGKPGLTPGFILGYIANNAIMINGVEVKAGFLGALILGLLAGY MAKWMKGLKVGKTIRSIMPILVIPISTVLVLGLAYYFIIGYPISFLMQALSDLMVTLNGS GKAVLAVFMGFFSEIDFGGPVTKAVSMFTLSMINEGIMEPNGIFRILVAVPPIGIFLSTI IAKKKYSEEERDNAKAVGIMGCLGITEGAIPYAIKDPKAVYPACIIGNIVGALIGAFGNV ACPVPHGGFIVLPVVENQLWFVVAILVGSVITALLLKVLKKDVLEER >gi|312956335|gb|AENW01000012.1| GENE 65 73722 - 74036 425 104 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 2 96 3 97 106 96 48.0 1e-20 MKIIGITACPTGIAHTYMAQECLEKECRKRGFDVKIETQGGLGIENELSEEDVAQADVVI LAVSVVIEGEERFENKRVLHTDVDEAISHVEKLVDRAVALVEGN >gi|312956335|gb|AENW01000012.1| GENE 66 74033 - 74497 235 154 aa, chain - ## HITS:1 COG:lin0446 KEGG:ns NR:ns ## COG: lin0446 COG1762 # Protein_GI_number: 16799523 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 1 143 6 148 154 87 32.0 1e-17 MIRENLLYLNKDIRDRETVITYIADMADTVGLLSDKNLFLKSVQEREHILPTSVGFKVAI PHGRSSSVREPFVSFMKTKHEFIWDTRNNNEVDLIFLIAVPEKNENNLHLRFLSEISKKL MDSSFRERLRNADNEHEVFVMLHEINEKVMEENT >gi|312956335|gb|AENW01000012.1| GENE 67 74490 - 76409 940 639 aa, chain - ## HITS:1 COG:BH3853 KEGG:ns NR:ns ## COG: BH3853 COG3711 # Protein_GI_number: 15616415 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 1 548 1 594 700 139 25.0 2e-32 MKAAQRQKKLLEILTYSENYMTVQSLADTFTVSKRTIHNDIAQLENQGIEFEKKPSAGLK LKNRKEARFVEHMDKYRPEQRRKQLMKELLFYENRITFQSASACYMVGVSSIIADIHYIK EHILNDATVSLIGDENGTRLTGTETEWQKALISFNEYLIASENLTFTDDAMLALFKEFYD TDIITACYTTIQALDDFNIYIAAQHYLINLFNVMIVLCHRLRKGYHHKIIHNAFYSDQIM AMMYYLIGDDLLRILKKDLNITYEDGDIYFLSMYLSANRIMLNSSLHRRGNPFKHIVENL IERMSNCVDVDLTQDQDLFYNLCLHLEPMIYRLKNRIYITNPMLFEIKQQYHLMFDLTWM IMDSIRTTLGVTLTEDEVGFLMLHFQNALEKKKKSKRILVVCPNGITTSELIANRIRSVL PPLDIIEAASIDTINSFELRSIDFIVSTIPLKSLDKPVVVVSMLINDSDIQRIEELYKKK LSIPKEADVRFIEIPQYLHEKNIYINDGKITKDEIIHQVCMGLNKEGCVDAHFETSVWER EQKGGTDIAVGGAIPHGAVSTVRKTQLALWINKEPVKWSKYRVKVIVFFALNSEDTAKTK VILEEAFSLIKTKEMIEKLSSMKNKKAVIKYIFGGSRFD >gi|312956335|gb|AENW01000012.1| GENE 68 76425 - 77036 543 203 aa, chain - ## HITS:1 COG:BH3723 KEGG:ns NR:ns ## COG: BH3723 COG0800 # Protein_GI_number: 15616285 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Bacillus halodurans # 4 202 12 208 214 102 33.0 4e-22 MELSKVTMILRGYTYEQVRCVAEVLINSSYVKNMEITLNTSNAYEIIKKIADEFQGRLHI GAGTVQTYDELVQAIAAGAVFVLSPRKMNQKMLDYCKQHNVIAVPGAFTPSEIAESLEMG ADIVKVFPANEVGFDYAKKLCEPMGELPLMAVGGIQAGNVKKALQSGYTYVGTAGGLFEK EDIQKMRKDHMLKSLEVFEKELL >gi|312956335|gb|AENW01000012.1| GENE 69 77330 - 78091 941 253 aa, chain - ## HITS:1 COG:lin2431 KEGG:ns NR:ns ## COG: lin2431 COG1349 # Protein_GI_number: 16801493 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 1 228 1 222 250 117 30.0 3e-26 MLSTERKLYLLQKVEREGTIHVRDVAKQLNISETTIRRDLMELEQEGKVRRVHGGAVRES LNQILTESRELLMQDRMLINFDRKSRICRSASELVEDGECVFLDGGTSIVAMIDYLQSRP IKIVTHNQLIVQRLHDPVAQIIIIGGDFNAKYHMSEGPMAQNMLGLYNFDRAFIGCAGMD PISGQCYTAEMGTRELKEIAMKNSNHSYLLIDDSKLFVKGFCKFTNADAFEQIFCNRLDE TVENLPENMKFVE >gi|312956335|gb|AENW01000012.1| GENE 70 78105 - 78302 63 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADETGVDVFPLNIRKGIKTGKAVRDDHSHNEALLSGMLFLLSDLSNLCYIILRTFCRAY AILLT >gi|312956335|gb|AENW01000012.1| GENE 71 78523 - 79185 288 220 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160938015|ref|ZP_02085372.1| ## NR: gi|160938015|ref|ZP_02085372.1| hypothetical protein CLOBOL_02908 [Clostridium bolteae ATCC BAA-613] # 22 220 14 221 223 250 68.0 5e-65 MDNCCAEQAPSCSSAESCCCEGPQGPRGYRGATGPTGATGSSGATGATGPTGPAGSSETV CCDCKEQIRNILQQIITLYPNQDLFITLESGDAAVGRAGALLLGPNGRTGVFEVINSQNT SQYLSICSIDTIQINDAVYNDAIVYLPEPVPALTDCCADCDAVIRSLLPVGRENVYITTN TQTPSIGTVIRNEYGMIVLANQTNRNITFVSSCSIDLFIL >gi|312956335|gb|AENW01000012.1| GENE 72 79387 - 79986 321 199 aa, chain + ## HITS:1 COG:no KEGG:BMB171_C2140 NR:ns ## KEGG: BMB171_C2140 # Name: not_defined # Def: hypothetical protein # Organism: B.thuringiensis_BMB171 # Pathway: not_defined # 31 198 18 188 189 100 46.0 2e-20 MHYDEYDDSCCDPCSMPSCHPYDCTPCCCPGPRGPRGFQGPTGATGPIGNTGPTGNTGAT GPTGTSVITNALSALNISAATVSVTSDGTNIPLPVQPYINGFTANASNTQFTVNQTGTYF ISYVIKMTSGLPMSSRVTRNDTPILNSISTSSTSSNEYSVSFMQSLTAGDVLSLQIYGVN GTVTLQSGTGASLNIVRIA >gi|312956335|gb|AENW01000012.1| GENE 73 80307 - 82034 2198 575 aa, chain + ## HITS:1 COG:no KEGG:CD196_3147 NR:ns ## KEGG: CD196_3147 # Name: bclA3 # Def: putative exosporium glycoprotein # Organism: C.difficile_CD196 # Pathway: not_defined # 56 575 117 675 675 290 65.0 1e-76 MHYDDYNYHDDCYGEDASPCSCDCNSCCQGPRGPRGFRGATGPTGSTGATGATGPGVGAT GPTGATGATGNTGPAGLRGNTGPTGSTGATGNTGATGMTPVITVAGTITGDPGTQASVTE TFTPSGASLLFTIPAGPTGPTGSTGSTGATGNTGPIGPAGATGATGASGITGATGNTGAN GVTGPTGPMGNTGANGVSGPTGNTGATGPTGATGSTGPTGPTGPAGPTGITGAAGGIGPI GPTGSTGSTGATGGIGPTGSTGVTGPTGATGNTGADGVTGPTGATGNTGADGAAGPTGPT GATGNTGLTGATGPTGAMGNTGADGATGPTGATGNTGPDGAAGPTGPTGATGSTGLTGAT GPTGATGNTGADGATGPTGATGATGADGAIGVTGATGATGLAGSSAIIPYSSGIPLSLTT IAGGLVGTPGFVGFGSSAPGVSIVGGVIDLTNAAGTLTNFAFSMPRAGTITSISAFFSTT AALSLVGSTVTITATLYQSTAPNNSFTAVPGAVVTLAPAITGVIAIGTISSGTTTGLSIA VTNQTRLLLVFTATAAGLSLVNTVAGYASAGIAIS >gi|312956335|gb|AENW01000012.1| GENE 74 82210 - 83835 1983 541 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2587 NR:ns ## KEGG: Cbei_2587 # Name: not_defined # Def: triple helix repeat-containing collagen # Organism: C.beijerinckii # Pathway: not_defined # 25 536 404 914 914 179 46.0 2e-43 MHYDDYDFDDKNCCNECSSSSCDQGDYDVCCCPGPRGPRGFRGPAGEAGATGATGATGNT GLTGATGATGLSETITIRSTTTADPGTPAQVHDSGGPNHVLDFVIPRGDTGITGATGPTG PGVGATGPTGATGATGNTGATGPIGATGPTGANGNTGPTGAIGATGENGATGPTGPAGPT GATGSTGAAGATGVTGPTGDIGPTGPTGATGSTGAAGATGVTGATGDIGPTGPTGATGST GAAGATGVTGATGDIGPTGPTGATGSTGAAGATGVTGATGDIGPTGPTGATGPTGAPGNT GATGTTGVTGADGAIGPTGPIGDPGPQGEPGPQGEPGPQGEQGPQGETGATPIVRVGSTT TSEPGTPADVSYVETPDGIELNFIIPRGDTGPGGGGGGLLAYGGKYNDSAQTLNLLIGAE QQLPLPVDMPASNVDLAPVNALTIVTSGVYEINYMFNASASLGAAVTLAVRRNGAAIPST EERHLLAIATESIYSGSVIETLSAGDIIDMAVSAAIALTLTLSTGVTVTLSVKRLDDALA N >gi|312956335|gb|AENW01000012.1| GENE 75 83904 - 86252 1750 782 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1883 NR:ns ## KEGG: EUBREC_1883 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 100 742 49 696 701 153 22.0 2e-35 MLKNLYAMELYKLWKNKRFLLFLFLLLLCNIGFLSYETWGQQGAETTAYQKLSTHLQTLS SDERFTYLQGHAHDVELAFVREQIRNLKTQHDPQAEMRIAALRDQFPELDQSGTIPSLYT GDLEAENAFLQPIIKQADTVKRYADFLKEVEQKAKTISAISIFAKEDSFSIRNIEKSKED YAAMHTVSIDFQLQDALLKALSYPITAVLVMLAIFLFATMVFQQESQRKLQPMLYGTLRG RHTYMNTKTASIAVSSAVIVGLFYGSNLLLMELAYGGIHLSASLQSLAAFQQSTLPISIF QFLLLFFFLKICICFIFAQAMLLLCTVFKHRVISCLSMIACVLLSLFMHIFLSPTGTFRV LYYLNPIRLFQVIELLQGYVNFNVFQQPVSLTLLYGSLLFITAVLLFVLLHIMVERSGRS CQLPAWIQRIHMPVTCSLWVQECYKLFWVQKIALVLLAFAGFQLYSYSHTQLYTSEKERL WSSYMQTLQGELTKEKEQFLQKEKTYYEDLHKQEARLQQRLDQKEISMAQYRRQVEPISN MLLKEETFQEVLQEYEYVKQDSSRQFVAPFGYRRQFFVSDRWSTLIFLFLFLLSIANLQC IEYRNKRQILLQTCVHAKKALVNRKLILALLCGTALFIMARLPQLLLHAKTYGFPCITAS ITSLQEFAQLPAGIHIAGFMIMAAILRMCALLPIIMFCFMVSVRVRQQLFTLLSALLIFL FPLLLSAAGIHVLDAVSLYPLLYNESCMTSVSGMWNLLFSILGYFLFSIACYRLARSFEK HV >gi|312956335|gb|AENW01000012.1| GENE 76 86246 - 86971 239 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 217 1 226 245 96 28 5e-19 MLEIKNVSKSYADKRVLHHIDLRLSHGIYALLGPNGAGKSTLMNILCNQLNYEEGSVLYN DKDIRELKQAYYALLGYAPQQQGLYDEFSGERFLTYMALLKNIDRKQIRKEVLRVAELVN MQQHLKQRCGAYSGGMKQRILVAQALLGSPEILLFDEPTAGLDPKERVSLRRVFDSLKEE HTLLIATHVVSDVESIADEVIFLKQGKLIAQGGVDELLLCHPGIASLEELYLHLFAGEAS C >gi|312956335|gb|AENW01000012.1| GENE 77 86976 - 88289 1332 437 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLCMLLCCITLLAGCVSREQAISDKAGGKSQKQSASNEALQLKRWSFRSLNQGDGNEQ GFYRIKTIDNGGGNLYSNILYTDYENKKEIFLCDKPECRHNDTSCTSYYAGLDMITQLIV QQDHVYLIANEDSVVNEKNETVTVPARILQMDLDGKNRKELCQLPSGYGFSYEDWAVAGD VLYVPVEKTENVSTEEGEMSSAVQVVREKKLYAIQLSSGEQKVVADMKNKSILGCMGRNL IVNAYRYKEDPEELLDKGDFAGYDRASQQAEIAYERVNVDSGRVEKSFHTDADTLGVFVN DSIYYTDTGGMLKQLNMKDGKVYARKQLDTSSASLMFGEDDHLFLYLGEKEYIYSLKDDS LKPATLQMSDTQEPIRLLGESRDMYYVIYDQVGEVKKTWAGTDQYEASSYAYGLIKKKDY WNNKADYIPVDVIVKGE >gi|312956335|gb|AENW01000012.1| GENE 78 88425 - 89186 887 253 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTRIAFALCLGVCSLSVLLPLGIFYIQDSVAVDKDIVWQSSTEDIAKNYPVVSRVYANF YQGNETMMDNESFHLSDMSAYTEKQQSQLTEVKKKYSRELNQLLAQGIFPYELLDLKKGE PFSVEFGTLSQMSEKSGAWQLNQVYRLNTANDNIGDFTLDKQTEKILNLEFYRYEVKQYS EQERKEFAWNMIQYLGLDSLKDWTYTRYGYESYQAKVQVYCEVEDLEDSSRFTMGITPLG QHTSTTLYNYIQH >gi|312956335|gb|AENW01000012.1| GENE 79 89176 - 90600 1397 474 aa, chain - ## HITS:1 COG:CAC1507 KEGG:ns NR:ns ## COG: CAC1507 COG0642 # Protein_GI_number: 15894785 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 467 1 473 473 171 28.0 4e-42 MKFSDKLTLSSTAVIAILFSTGATFMMVQNHDHLLQSYISRNMQTHDLESFSLESKLTQD ATSNLTSFGSDEKAIRSRSMYYLQQVASHMNQPQTQYALLDTKHTVLYATGEKKLFEEHS LNDPQTYRIVSYNNSRIMLVSSQITVGKFTYLLESGYDITSCFQERNRQFQTFFLTLLCV LLFSFLLLKRLSVYLSKPILKLHEASRRIASGNYEKRTSIQSDDEIGELSRSFDEMAKAT QQTIQQLEVNLAQREDFMSNFAHEIKTPMTAILGFADTLRTYDCDVDTRKKCADYIYTEG KRLEKLSYTLMDLLSLSGKDIQLQPVSIASVVKQLRQYYDAVSITDRLCFHCASCTVYAL EELLFSALRNLIDNAIKASDAAQEILVKGELCGKSYRISVTDHGIGMREEDIQQASQPFY MADKSRARQQGGAGLGLSIVKRICDLHGSPLLITSKLHEGTVVAMLLEVVDHEN >gi|312956335|gb|AENW01000012.1| GENE 80 90584 - 91252 1003 222 aa, chain - ## HITS:1 COG:CAC1506 KEGG:ns NR:ns ## COG: CAC1506 COG0745 # Protein_GI_number: 15894784 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 215 2 216 217 184 44.0 1e-46 MRLLIVEDERAIAEVMMLNLKRVGYECEYAQDGEMGAAMVEKQSYDLVLLDIMLPKINGY ELMEYLAQLQIPVIFITAKGSVQDRVKGLHMGADDYLVKPFAVDELTARVESVLRRYHKS MQDIHVLDVTIHTATRLVEKENRTIALTKKEYELLLYLVQNKNIALYRDTMYEKVWHEEE FEQTRTLDLHIQRLRKKLDWHRVIQTVYKIGYMLEVKDEVQR >gi|312956335|gb|AENW01000012.1| GENE 81 91634 - 92554 823 306 aa, chain - ## HITS:1 COG:no KEGG:PST_3826 NR:ns ## KEGG: PST_3826 # Name: not_defined # Def: hypothetical protein # Organism: P.stutzeri # Pathway: not_defined # 43 296 40 292 295 67 26.0 8e-10 MSNARNQLNYSNDLFFKYTLSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIIGK KRIILDVHVKDEQNRHFNIEMQTTCKGIAEMMRFEFYGARALNNQLKSGEFYDQLKPVYQ IIFIDEYAWNNRNLINQYQMRNEQGEDESGYPLILRTFVHMPAINDIVKEKEMQRLNDFE QLVYLFENNEKNDILKSKERLVRVFMNKYEEMQKDDELWSTAMAIQMGEARYRNGLRDSF DEGKAAGKMEGERQLLHRQMQIKFHEDCATWLQALTEEQMQIVSTLLLECDTFESLRKRL HKSDKK >gi|312956335|gb|AENW01000012.1| GENE 82 93313 - 93723 387 136 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELFDILQTAEEVSGIDMKAVLQAMGISVNVKEHTEQEQALICSFVSNFITLPAWRVDND DIVKALLNVLVEKYKLPLSFVAAAAGVQKEQLASFQKGGEIPLSTKYTLAAQISRLSNMI CPFDETMQALKQTGRK >gi|312956335|gb|AENW01000012.1| GENE 83 94059 - 94262 336 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295099823|emb|CBK88912.1| ## NR: gi|295099823|emb|CBK88912.1| hypothetical protein [Eubacterium cylindroides T2-87] # 1 66 34 99 110 65 51.0 1e-09 MKEGTLVYYLDEGQIHDGHVIDVETKQNGFVFSIDSYGECGGFCRIDSAQINHTVFEDVE EAKKHVR >gi|312956335|gb|AENW01000012.1| GENE 84 94474 - 94893 489 139 aa, chain - ## HITS:1 COG:no KEGG:CLH_0366 NR:ns ## KEGG: CLH_0366 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 127 1 131 144 102 41.0 5e-21 MLAETAVKYYHMGYNCAESIIRAGNEVYGLDLHDRDMKMTAAFGGGFQIGDVCGALCGAA CVVSARYVETKAHDCSFLRTLTQKLVIAFQNKMGSRLCAKIKPVYHSKEKKCEHTVETAA AILEEVIREWDEERKGIQG >gi|312956335|gb|AENW01000012.1| GENE 85 95118 - 96014 771 298 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 7 298 11 300 302 217 38.0 2e-56 MINVTNIERFATHDGPGIRTTLFLKGCPLFCPWCANPETQSVKSTMFHNAVRCVGCRLCE RACPHQAITFAQGNFTYREDRCQRCGACERVCLQDAIAFQGKEMTLEAIMAELCRDRDYY ENSGGGITFSGGEPFVQQEALWELLRACKQEGFHTAVETTGNYSRDLLIRMMPLIDLFLF DFKHPDDAILRTVTGADGALIKENLRYLLKVDPQKVIVRIPVIPGFNYEKDTLESALRYL KSIGVCEVNLLPYHTLGKVKYEKMGKPYTLSNKMLQKEDLMCYLEYARQLGMQANIGG >gi|312956335|gb|AENW01000012.1| GENE 86 96007 - 98277 2710 756 aa, chain - ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 110 752 113 805 810 235 28.0 3e-61 MKKKISIDGAQNVEVSKPIPCEKSPQEQLAIMEAYTQAHRDSAALDKAERELRCLRTIFP ALFRSIEDDDLLAGRLDFLPIGFGSVTSIGGVSHYCVFHKLRSFKEQLDSEEEKARVDAL YAYWEEHDTKAIYCADVLNESTIGRFIDCSYPLMATARLSGMMLNYKKLMAYGLEGLKTL IRSQKPNTFLNSCVESLTLLQEVIDRQIELVREAKLDAARSRLQDLELMERDLAVIRTQK PATFHQALQLFWIYALVAGVINYGRMDDVLGPYLQRDLEDGLITEEEAYRYLKSLWKMIE NRRTTVNGRIIVGGEGREHPEEGDTFARICLRVCRDTRYVEPQFTLRFSKNTPADIMDMA YDCIGSGATYPTLYNDDVNIEAVMYGMRVSREIAEQYVPFGCGEFVIQGKSVGTPNTLLN LLKLLNITLNAGIDPMDGKAKNGPVSIPECSAFTTFDELYDTYKELLDYYFDLSVEAQKH SYEVMNQEASFLFTSILMDDCITRGRALLDGGVQILGGTNETYGNINASDALYAIRKLVY EDKVYTLQQLHEAQLADFEGYEQLRKDLLHADKYGNDKPECDALANDLYEFVAKGIRQRG IDAGLGYYLIVISNNQTNTDWGHQTFASLDGRKTGVFMNPANNPQGGAAKSGPTACLNSL SRFQAKYHGGSVQNIKFTPRMFNEDRDKIRILFDTYFKKGGCQLMVTVVDHGVLEDAQKH PEKYPDLIVRVAGYSAVFVNLTRDIQDELLSRMLYD >gi|312956335|gb|AENW01000012.1| GENE 87 98310 - 99059 1014 249 aa, chain - ## HITS:1 COG:lin2933 KEGG:ns NR:ns ## COG: lin2933 COG3010 # Protein_GI_number: 16801992 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Listeria innocua # 10 232 4 226 231 168 38.0 9e-42 MKTTDPKKRALLDGLKDGLIVSCQVQKDDPIYTDDIVVKMAEAAKWAGAVAIRANSPEQI KAIKDKVDLPMIGLWKIWHDDTDVFITPTMDAARAVWEAGAEIIALDCTSQITHENTQAW DLIKTVKQEIPEAIIFADVSNMEEAARAVENGADIVAPTLYGYTKETEHIEGADYRMFAE MCRTFRDEAFVMMEGHIYTPEDAMKCIYLGAHSVVVGSAITRPHLTAKRFVDLLGGYQDN WRDAEKAKH >gi|312956335|gb|AENW01000012.1| GENE 88 99373 - 99726 447 117 aa, chain + ## HITS:1 COG:CAC0766 KEGG:ns NR:ns ## COG: CAC0766 COG0789 # Protein_GI_number: 15894053 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 117 1 121 126 118 53.0 3e-27 MTIAEVSRMFEISADTLRYYERIGLLPAASRTCGGIRDYGVKDLGWIAFIKCMRSAGLPT EALELFQQGDASTQARLDILKEQRTLLKKRVLEMQATLKRLDTKIEGYEDKLARAEK >gi|312956335|gb|AENW01000012.1| GENE 89 100140 - 101324 1725 394 aa, chain + ## HITS:1 COG:no KEGG:wcw_1811 NR:ns ## KEGG: wcw_1811 # Name: not_defined # Def: hypothetical protein # Organism: W.chondrophila # Pathway: not_defined # 31 269 231 453 603 168 58.0 3e-40 MTYQDEYYDDYTDNYAVCEDEHALQEDIPTDTCCEPYPHTCCPGPRGPRGFRGPAGPTGP MGPTGPGIGVTGPTGPTGATGNTGADGATGPTGPRGATGATGNTGASGITGATGATGENG ATGPTGATGPAGSPGPQGLIGPTGPTGTPGVTGPTGNIGPTGLDGRDGPTGATGATGMTG ATGATGPRGATGNTGADGATGATGTTGATGPQGLRGLQGPTGPTGLRGATGPTGADGAIG PTGPTGSTGPIGATGATGPRGIETQSFASFADFARAFENAQPMPLYQSIADTTGNITSTS TTSLLLQPGFYQISLEVSTILSTAGYMQITPAYNGAPHIEFGIYSRTGSPQNTAEGSSHF IIEVTQATPFTVNYNSNVANTDGQLTLVIVKLER >gi|312956335|gb|AENW01000012.1| GENE 90 101805 - 102404 559 199 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00847 NR:ns ## KEGG: EUBELI_00847 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 26 183 73 228 251 73 28.0 3e-12 MGWYQKQKRIYESRQQNHEHDLPEDEVVHSEAKKEDMTKMEENKDAQQPVKPQESASLIG EHTEVTGDVSTDDDLTIYGRVKGNIKCSKRIQIYGSVEGDILCQDASVIQAEIHGNIECK ETLKISQESTVEGNITTTALENGGAVRGDIHAGGHIRLSEKSQVSGDITAASISVDQGAV IQGCVMIGIQDTNGAQKEA >gi|312956335|gb|AENW01000012.1| GENE 91 102791 - 103057 329 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402117|ref|ZP_06646256.1| ## NR: gi|293402117|ref|ZP_06646256.1| hypothetical protein HMPREF0863_02397 [Erysipelotrichaceae bacterium 5_2_54FAA] # 8 85 84 161 168 65 47.0 1e-09 MKREEKKKREELKKAQYDGIVKALEKKKEGAGSYGRPRASLPEDFREQVEYCQKNHIPLE TYRRRTSLKKATFYKYVKVLQSEHEHTF >gi|312956335|gb|AENW01000012.1| GENE 92 103108 - 104721 704 537 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 8 302 9 299 301 231 42.0 2e-60 MKQQIYNTALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLNVIDEYIDDGWSGTNFD RPSFQRMIEDIEAGKINCVVTKDLSRLGRNYIMTGQYTELYFPSHNVRYIAIDDGVDSEK GESEIAPFKNIINEWVARDTSRKVKSAFKTKFAEGAYYGAYAPLGYKKHPDIKGKLLVDE ETKWIVEKIFSLAYQGYGSAKITKILREEKVPTASWLNFTRYGTFAHIFEGKPESKRYEW TIAHVKAILKSEVYIGNSVHNRQSTVSFKSKKKVRKPESEWFRVENTHEPIIDKEVFYRV QEQIKSRRRQTKEKATPIFAGLVKCADCGWSMRFATNKANKTPYSYYSCSFYGQFGKGYC SMHYIRYDVLYQAVLERLQYWAKAVQQDEEKVLNKIQKVGNAERIREKKKKASALKKAEN RQNEIDRLFAKMYEDRACEKITERNFIMLSGKYQKEQIELEQQITNLREELSKMEQDMIG AEKWIELIKEYSVPKELTAPLLNAMIEKILIHEATTNEENERIQEIEIYYRFIGKVD >gi|312956335|gb|AENW01000012.1| GENE 93 105827 - 107041 778 404 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 63 392 25 351 352 251 42.0 3e-66 MNDKNFIEELRQKREEYGVTQRKLAVACGISRTYFNQIENGTVVPSAELKQTIEKQIERF NPQEPLFLLIDYFRVRFPTTDALKIIREVLQLKADYMLYEDFGKYGYESKYVLGDINIMC SMQEHLGVLLELKGRGCRQMESYLLAQERSWYDFMLDCLTAGGKMKRLDLAINDKAGILD IPKLKEKYKAGECISYFRMQKDYSGTEKCGSDLPKNTGETLYLGSTSSELYMCAYQKNYE QYVKNGIEVEDTEIKNRFEIRMKNERAYYAVVDLLTYRDAERTAFSIINHYVRFVDREDD KPKSQWKTNDDWAWFIGENREPIRLTTKPEPYTLQKALHWLQRQVAPTIKMVQALDRENH TTILKDMIEQAELKDKHKHLLQLEKSTIEERIDTAVPQENDGIF >gi|312956335|gb|AENW01000012.1| GENE 94 107450 - 107917 467 155 aa, chain - ## HITS:1 COG:SP0175 KEGG:ns NR:ns ## COG: SP0175 COG0054 # Protein_GI_number: 15900112 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Streptococcus pneumoniae TIGR4 # 1 154 1 154 155 275 93.0 3e-74 MNTFEGNLVAENIKIGIVVARFNEFITSKLLAGALDNLKRENVGEKDIEVAWVPGAFEIP LIASKMAKSKKYDAIICLGAVIRGSTSHYDYVCSEVSKGIAQISLNTETPVMFGVLTTDT IEQAIERAGSKAGNKGSECAQGAIEMVNLIRALEV >gi|312956335|gb|AENW01000012.1| GENE 95 107918 - 109123 558 401 aa, chain - ## HITS:1 COG:SP0176_1 KEGG:ns NR:ns ## COG: SP0176_1 COG0108 # Protein_GI_number: 15900113 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 202 1 202 203 359 85.0 4e-99 MKYQKIKEALQALQEGKLVLVMDDKERENEGDLICSAQFATTENVNFMATYAKGLICMPM SESLANRLMLSPMVEDNTDNHETAFTVSIDYKDTTTGISAEERGLTARMCVTENVNPFDF RRPGHMFPLIAKNGGALERNGHTEATVDLLRLAGLKECGLCCEIMNENGKMMRTPDLIQF SQTHHIPTLTIKELQEYRKVYDLLVECVSVVEMPTKYGNFKAHCYINKLNGEHHVALVMG DLNNGNDVLCRVHSECLTGDAFGSLRCDCGQQLDKAMKMIAENGSGVLLYMRQEGRGIGL VNKLKAYHLQDNGMDTLDANLALGFQGDLREYYIGAQILRDLGIKSLHLLTNNPDKVYQL EDYGMKISSRVPIEIEANPYDSFYLKTKKDRMGHILNMEEK >gi|312956335|gb|AENW01000012.1| GENE 96 109143 - 109778 76 211 aa, chain - ## HITS:1 COG:SP0177 KEGG:ns NR:ns ## COG: SP0177 COG0307 # Protein_GI_number: 15900114 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Streptococcus pneumoniae TIGR4 # 1 211 1 211 211 336 83.0 2e-92 MFTGIIEEIGKVERIQKDTCNCKLSIKASKILEDIHLGDSIAVNGICLTVTCFTRQSFTV DVMNETWNRTALSLLRHGSLVNLERAMPMNGRLGGHIVTGHIDGTGRISSVRRDKNAVWY QINTQREILNLIVEKGSIAIDGISLTVAKVSKADFSVSVIPHTLEQTILKNKQVGDMVNL ENDILGKYVQKLIDNSNETELSKELLCRYGF >gi|312956335|gb|AENW01000012.1| GENE 97 109763 - 110863 264 366 aa, chain - ## HITS:1 COG:SP0178_2 KEGG:ns NR:ns ## COG: SP0178_2 COG1985 # Protein_GI_number: 15900115 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 144 366 1 223 223 379 79.0 1e-105 MSDTEYMKLAIKLAKKGAGYVNPNPMVGAVIVKDNRIIGQGYHEIFGGLHAERNALKNCR ESPVGATLYVTLEPCCHYGKTPPCTEAIIKSGITRVVVGTLDCNPIVSGKGVKVLEENNI QVVIGILEMECQQLIKVFRKYVTRHIPYVFMKYAMTMDGKIATYTNQSKWISGEKARKQV HQFRHKVTAIMVGVNTVIQDDPLLTCRLENGENPIRIVCDTDLRTPITSKIIKTANDIKT YIATSSIDESKIALYRKCGCEIIYTKKKGNHIDLMNLMQCLGNMQIDSLLLEGGSAMNWS ALEQQIVDEVQIYIAPKIFGGSAKSPVSGQGVAFPNDAIMLKPYAFSQVGNDYFIESEVI YPCLQE >gi|312956335|gb|AENW01000012.1| GENE 98 111217 - 111444 427 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCVRRYEDNWGELKGKLMERDVLEVLSFSAFAQDESDLEEKLRYCGEKDIHIQVKDARIT PDVYLEFPKQKDIKK >gi|312956335|gb|AENW01000012.1| GENE 99 111674 - 112150 469 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402458|ref|ZP_06646594.1| ## NR: gi|293402458|ref|ZP_06646594.1| hypothetical protein HMPREF0863_02735 [Erysipelotrichaceae bacterium 5_2_54FAA] # 25 158 58 191 191 77 36.0 2e-13 MLLYPVSPDLMTFIGGVMLLFQGVPQLILFLEEDERFLISLLSLVECLLVSFLGVWMLTN PEEVYDTLPAVLAFVTFLHAFSNLIITGRIRHLQYSKWWIAALVTAAKMTATAALAVQFH LHSEFMVVGTGICMLLDAASDIWMWKKLEALIIQDMGI >gi|312956335|gb|AENW01000012.1| GENE 100 112447 - 113067 797 206 aa, chain + ## HITS:1 COG:no KEGG:Apre_1054 NR:ns ## KEGG: Apre_1054 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 9 202 5 200 201 130 36.0 3e-29 MKILDTLGKTKKAIGGVVAICILAAVIFFAGTVFGGKQSEPKITSTALTQQLQEVNDLAV MEYNYTKVGKFENSLTLNGWNIPLTKKSFLLTYAGQLKAGVRMDQAEVDVKGKTITVLLP EVEILSNIIDEKSIEVYDETKNIFNPISIEDYTAFATQQKDKVADEAVENGLLSEAATKS QSAIRKFFNMIPEIKEQYSIEVKFKS >gi|312956335|gb|AENW01000012.1| GENE 101 113084 - 113374 418 96 aa, chain + ## HITS:1 COG:no KEGG:Mlab_0038 NR:ns ## KEGG: Mlab_0038 # Name: not_defined # Def: hypothetical protein # Organism: M.labreanum # Pathway: not_defined # 1 94 1 92 94 77 42.0 1e-13 MVKHILFVKMKDNSIEQCEKVKALFLSMKEQIPFLREVQVGIDYLHSQRSYDVVLELVVD DRQALEDYQKNTYHVEKVKPYIHAVRSGSATVDYEY >gi|312956335|gb|AENW01000012.1| GENE 102 113521 - 114306 740 261 aa, chain - ## HITS:1 COG:AGpT255 KEGG:ns NR:ns ## COG: AGpT255 COG1349 # Protein_GI_number: 16119956 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 239 9 237 258 114 33.0 2e-25 MNNDKKARRRHQRICEVLQEQEHMQVLELCELFHVSPATIRNDLTVLEKKQLLKRIPGGA VSIGRMPQNTIFSARESLHMDLKDKMADYAVAHLIKEGMNVALDAGTTCCAIAKKLADAS CRCTVITYSLPVANALVHCEHIEVFLMAGRLDKKHESFHDDVAVEAMKRMNSDVFFLSPN GIDPIAGITSSATDENIMKRMMHEHAEETIVCADHSKFLKKAFKTICQLSDIKGILSDSE LSGEIQQKYSAMGVRLYLAEK >gi|312956335|gb|AENW01000012.1| GENE 103 114508 - 116862 1928 784 aa, chain + ## HITS:1 COG:SP1623 KEGG:ns NR:ns ## COG: SP1623 COG0474 # Protein_GI_number: 15901459 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 8 752 6 762 778 552 42.0 1e-156 MEVTNTAIKGLTQKQVEERIRNHQRNSVSHSITKTHGQIFKENICTLFNLLNILIALGLV LVNAWSNLFFLAVIICNIVIGILQELHAKKLVDDLSLLMRQKVSVMRDGVVCSVDVQDLV VDDIMVLSSGEQIVCDAVLIQGEAEVNEALLSGESDPIHKRKKDQLLSGSSIISGKCYAR IIHVGEENYANRIASEVKEVRAVNSRLLNAMKRITRLSGYAIIPLGILLFLEAWGFRGDS IQESVITSSAALLGMLPKGLVLLISVSLAAGVSRMAKHKVLIQDLYSLETLANVDTLCLD KTGTITTGDLKVEALLPLCDEAETDMEYIRSFLHYSDDNNATYQALCAQISPCAVHEPKA RIPFSSLRKWSSAYFEGYGSLVMGAPEKLLEKLDTSFSAIMEEGKRMVVIGRCAQVIDKD APLPIIQPLYAVIFTDTIRPHVEKTLQFFREEDVNIKIISGDHITAVSAIARQAGLHNWN ACLDMSGIGDDPFVIEQLAEQYAVFGRVTPLQKKLLVQALQKKGHAVAMSGDGVNDMLAL KEADCSIAIAQGSDAVKQMSQIVLLDSDFSALPMILKEGRRVVNNATRVAGVFFIKTIYS ILLSVLCIVMNLPFPFIPIQITLIDLAIEAFPSFLTMLEPDHRKVNGDFLSTVLRNALPN AIAIVYSFLAIEFMSDGFSIRYDEAVTMMYVCVAVISMLAVYHSSRPLNRLRTLICICMT AGFILAILLFHNLLHITLLSFRLLILTAILALSAILVRQILMLLLPWIPGLRPQPNNARQ HSLS Prediction of potential genes in microbial genomes Time: Sat May 14 02:06:55 2011 Seq name: gi|312956332|gb|AENW01000013.1| Clostridium sp. HGF2 contig00073, whole genome shotgun sequence Length of sequence - 3019 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 428 - 1534 538 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 1732 - 1792 14.6 + Prom 1825 - 1884 6.2 2 1 Op 2 . + CDS 1909 - 3015 663 ## COG0582 Integrase Predicted protein(s) >gi|312956332|gb|AENW01000013.1| GENE 1 428 - 1534 538 368 aa, chain + ## HITS:1 COG:RSc3247 KEGG:ns NR:ns ## COG: RSc3247 COG1961 # Protein_GI_number: 17547964 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Ralstonia solanacearum # 1 203 80 295 462 99 25.0 8e-21 MEKVEKGTVKVIIIYKLDRLTRSVLDVYEFIKKLMEKECNLIAVVDNIDIHSANGRLIVG ILAIIAQWERETVIERTNDALVQMCEQGKFPIGYTPLGYKKKNNRLSINKKTQRFITHIF KSTSNGKLPVEVYREVKSMGFHHDYADPIAFIKKILKSTIYFGEFTYRGKIYNDIVPAII SKELYLEAQAMSKKRYKLNNNVKYYFGYKVRCQCGEICECKSTKKVLADETVERYYYYYC DHCKKRVNQNFILNDVLSRILDIDFKAKEQKQKSKYKQQLYKVNAKINKLYMSYQENDEL DTKSYLFTLAKLQTEKEKLMLLLNTEAIQQNLEWKEKTDEERRVLIHRYVAHVVIDMDIK QILKVELY >gi|312956332|gb|AENW01000013.1| GENE 2 1909 - 3015 663 368 aa, chain + ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 36 366 36 368 368 133 27.0 5e-31 MAVEKRNGKWYIRGKVKLEDGSFKDYHRVARGCKLKKEAMKIEDSFLAKYNEDLEQMRAS NITFKELTEMYLREKQGSTKSSTLATDKYMFDQMNELYDKRINLIRSKTIKDFIESYNTP EYKLSYVNKMRTYLNKLFSFAVKQNLIERNPVSSIPNFKRPDELKEEMQFYTPDEWKRFV QAFPKDDIMYYTICCTLYYMGMRRGEVLALNRKDDVDIVKGTIRVNKTVSQYVSGQRYVV TPPKTKNSYRVIKMPEEELQIMKKYLEWYDSCPGASADGFLFGMDQPIIPKLLNKRFHRV ADAAGLPQIRIHDLRHSHATLLINHGANIKAIADRLGNTVEEVLKTYSHLFNETEDAMIQ IINNVFKK Prediction of potential genes in microbial genomes Time: Sat May 14 02:06:56 2011 Seq name: gi|312956328|gb|AENW01000014.1| Clostridium sp. HGF2 contig00030, whole genome shotgun sequence Length of sequence - 2335 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 66 - 125 2.6 1 1 Tu 1 . + CDS 153 - 566 463 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Prom 591 - 650 3.9 2 2 Op 1 . + CDS 730 - 1815 1133 ## gi|160914260|ref|ZP_02076481.1| hypothetical protein EUBDOL_00270 3 2 Op 2 . + CDS 1812 - 2279 466 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB Predicted protein(s) >gi|312956328|gb|AENW01000014.1| GENE 1 153 - 566 463 137 aa, chain + ## HITS:1 COG:lin0143_1 KEGG:ns NR:ns ## COG: lin0143_1 COG2893 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Listeria innocua # 6 109 4 111 156 63 34.0 7e-11 MEKFNIVIGTHGRFGEELVNSARMIAGALENVQCCSLLPEYSFEDYMKLADETMCTKEGF TIVLVDLYGGTPCNVFTVMSRKYHYPVLTGLNLPMLIDLYLKLSNMDEADLDEEALLRET METLQTSCVHTNTQLES >gi|312956328|gb|AENW01000014.1| GENE 2 730 - 1815 1133 361 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914260|ref|ZP_02076481.1| ## NR: gi|160914260|ref|ZP_02076481.1| hypothetical protein EUBDOL_00270 [Eubacterium dolichum DSM 3991] # 1 359 1 360 360 431 61.0 1e-119 MLIGEVFEEFINVVQENNRYTIGLVNDNMTVTLCSNKAEIGRQIDVNRPDKHNAFFEVRV KGQDFGFLWVSGNDENLPMISKLLNESLTVRLMYEINQKTLNQKVTKDDELVKYILNTEN FDMNHVLSLLDELEIDKNKPRVAIYVVHNEGFNTKDVMRLKMKPDSKEIIYSLLNSKCLL IFKDLPETCQSSTDFKPFIRDYIRSLREWEMTDCYYFVGSIQKKLRQYAISYQNCLWLKN HVTYEKDVPVFFSDYLYDYFLSKVAVDDIRDVFDYYRECGKGVDIEEMVDICDKLFVNDF NLTQAADDLFLHKNTLIYKLKKYEEVFQIDVRGSFQGKVLLMLISYALREYQKRVQVGDE A >gi|312956328|gb|AENW01000014.1| GENE 3 1812 - 2279 466 155 aa, chain + ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 5 146 4 149 161 69 27.0 2e-12 MSTKIKLARIDKRLLHATVALNWNQFIDADNVLIVDPDYVNDPFIADVMQLCLPKTMKVK IFSIEQFLEYINEGRNIKAMVIFPNLSVACDAVKAGFRTKEIQMPYPASRMMIKSLSDYF SEEDIEKIRYIQSQGIRMFFQTAPFDNKDYSIFKK Prediction of potential genes in microbial genomes Time: Sat May 14 02:07:15 2011 Seq name: gi|312956307|gb|AENW01000015.1| Clostridium sp. HGF2 contig00027, whole genome shotgun sequence Length of sequence - 18611 bp Number of predicted genes - 18, with homology - 17 Number of transcription units - 8, operones - 3 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 + CDS 62 - 688 430 ## COG0675 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 694 - 987 83 ## COG0675 Transposase and inactivated derivatives + Term 1001 - 1048 1.9 + Prom 1668 - 1727 6.9 3 2 Op 1 . + CDS 1957 - 3888 1680 ## BCQ_2399 ABC transporter, permease 4 2 Op 2 . + CDS 3910 - 4146 221 ## 5 2 Op 3 . + CDS 4206 - 4967 254 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 6 2 Op 4 40/0.000 + CDS 4983 - 5519 745 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 7 2 Op 5 . + CDS 5650 - 6879 1107 ## COG0642 Signal transduction histidine kinase 8 2 Op 6 . + CDS 6941 - 7120 204 ## Lebu_1380 protein of unknown function DUF1703 9 2 Op 7 . + CDS 7210 - 7482 208 ## Lebu_0945 protein of unknown function DUF1703 + Term 7524 - 7567 1.6 + Prom 7513 - 7572 3.7 10 3 Tu 1 . + CDS 7783 - 8169 307 ## Cbei_2371 hypothetical protein + Term 8194 - 8240 6.2 - Term 8182 - 8227 2.2 11 4 Tu 1 . - CDS 8244 - 9164 750 ## COG1482 Phosphomannose isomerase - Prom 9413 - 9472 4.7 + Prom 9157 - 9216 4.1 12 5 Tu 1 . + CDS 9310 - 10950 1113 ## CLL_A2076 hypothetical protein + Prom 10998 - 11057 3.4 13 6 Tu 1 . + CDS 11095 - 11814 838 ## COG0274 Deoxyribose-phosphate aldolase + Term 11820 - 11857 -0.8 14 7 Op 1 6/0.000 + CDS 12282 - 13976 2160 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 15 7 Op 2 30/0.000 + CDS 14003 - 15268 1315 ## COG0065 3-isopropylmalate dehydratase large subunit 16 7 Op 3 10/0.000 + CDS 15271 - 15765 659 ## COG0066 3-isopropylmalate dehydratase small subunit 17 7 Op 4 . + CDS 15766 - 16845 1403 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 18 8 Tu 1 . + CDS 16900 - 18021 1407 ## COG1228 Imidazolonepropionase and related amidohydrolases + Term 18058 - 18101 -1.0 Predicted protein(s) >gi|312956307|gb|AENW01000015.1| GENE 1 62 - 688 430 208 aa, chain + ## HITS:1 COG:TVN0764 KEGG:ns NR:ns ## COG: TVN0764 COG0675 # Protein_GI_number: 13541595 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma volcanium # 1 207 121 311 416 134 40.0 1e-31 MIFTNQICKLRKDKHGWYVKFPKAVLQAGCVRDRYDLGKMDLHEQKLKEVRLIPNGDTIK LEIVCEIEIKEPTITIHEATRVAGIDIGVDNLTAIAFTSGHHPVLIKGNEIKAVNQFYNK QIAHYRSLLRTGKKDSKGIHQTKRMKRISEKRNRRVKDILHKASRKIIDLCVEEGIEVIV VGNNAGWKKRIHMGKKNNQTFVQIPFHT >gi|312956307|gb|AENW01000015.1| GENE 2 694 - 987 83 97 aa, chain + ## HITS:1 COG:alr7153 KEGG:ns NR:ns ## COG: alr7153 COG0675 # Protein_GI_number: 17233169 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 2 77 309 384 408 77 48.0 6e-15 MIKYKGEAAGIRVVVCEEAIQSKASSIDEDQIPVYGNDVAHTFTGKRINRGLYRSKNGIL MNADINGASNIIRKVYPCMPKRERWSRGTVNVPVTCI >gi|312956307|gb|AENW01000015.1| GENE 3 1957 - 3888 1680 643 aa, chain + ## HITS:1 COG:no KEGG:BCQ_2399 NR:ns ## KEGG: BCQ_2399 # Name: not_defined # Def: ABC transporter, permease # Organism: B.cereus_Q1 # Pathway: not_defined # 1 643 41 689 775 182 22.0 3e-44 MDDMGKVADYNFSMMNITKKDVQKIRAFMKAKDIDAYQIEHAITLPLSVMRFNGTNDLES SGCFATTLPKTYNFLFDENNKTPDIQPGEVGIPLSIKHQLNLQLNDTFQILRGTRTYTYK ITSFVRDSVYGSDMMGQKRIILHPADYQIQYDITQDIDHAVVLSVNDGPNTKQLEYDMQK AGLPNAILVDKETAELSFMGVSLGTSAMLLMSGIILLCMSFLIIRFTILFQIESNYAEIG IMKAIGFQHSQIKPLYLMKYMSITLIGVIIGFFASIPFAELLESMQASVVPVMPGNTGTY LSLVIVILIPALVYTVTTLVLRKLKKQSTMDAIRKGNEGETYKEHTRFTLAKTRLHSLHR FLAFNDLMAQRKHFLMMVIIYAFCMVLVLVPLTLKDAFQKDTFLQILKISIGDLYSQQNG GNSVKDLEEKRAMVLHDLKVYDEKIRVDIETMTSASLSDDGLNTSVFLMKRADGNTITFD YGKAPKLSNELALSTTLAKRYGKTVGDSISMEYEGKKNTYLISGIYSSMMNLGNNILAGD IEYEYAYTGYLVIHLSQDELTSHQVAETIKKEYKGLKLIDSKQMTKSFSGDMPQQITMMS DLIITIILIITFALTILFSKLHMLRAKKAIALMRSMGYAKRNI >gi|312956307|gb|AENW01000015.1| GENE 4 3910 - 4146 221 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIQVLCGLLLGILLHTFCTNGQLEAYLESMGMGSVALKSAPLNMYVLYPLLFILSAMAAQ WIVNRTIPAWDIKDLSEE >gi|312956307|gb|AENW01000015.1| GENE 5 4206 - 4967 254 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 222 1 217 245 102 29 2e-21 METMIEVRQLCKSFVINKKQNHVLRNVDLSIHKGEFIAVMGPSGSGKSTLLYTISGMDHI NSGTVEFDHKEISRYNEMEMAKLRLHEMGFIFQQMHFLNNLNIYDNVILPGYMAKKRKHK EINAYADELLRKFQITSIAGHSIQEVSGGELQRACIARAMINQPQILFADEPTGALNSSN AKEVMDMFLKVHEQGTTILMVTHDVKVASYAQRICYINDGKIESNLDIGMLKHADELKER EKKVYNWLVEKGW >gi|312956307|gb|AENW01000015.1| GENE 6 4983 - 5519 745 178 aa, chain + ## HITS:1 COG:CAC2435 KEGG:ns NR:ns ## COG: CAC2435 COG0745 # Protein_GI_number: 15895700 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 177 5 177 224 122 38.0 3e-28 MIDILVVEDNDELRDVLERFLLHEGFQTRCVQRGDDALTLLQQEKVRLLLVDIMLQDMDG FRICTEARQSSNLPIIIMSARTQTSDQLLGYELGADDYVEKPFAMAVMLAKIKAQLRRGY EMQEERNVLKDDDLLVDIERRNVTLKGKQLALSVKEFELLVLLLRKRHTTLRKDYIFS >gi|312956307|gb|AENW01000015.1| GENE 7 5650 - 6879 1107 409 aa, chain + ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 128 398 201 482 498 89 22.0 1e-17 MKAWNRLTVLVPALLLLLLVGLNGLLLWLRDETIPDEALVEINRMAKELEKGKQMNELAS SKIQVELLELKKTSMQSYMDRSRTRSVLLPAKQEGSFYRFTYRVQRIPSSIFWIINTTLL GVILLVVYLLFYIRRQIIQPFHNMEAMATALKNRDFTYELPQQKHRFFGKFIWAIDVMKE ELRHHEEKETALMKEKQTMIASLSHDIKTPLSNIRLYTDAMKEHLYSEELICERLYENCD KIDQYVKEIMHTSNEDLFDFDVHMEEVYLHDVEVLLRREQERIELALISYEQSPCKDQLV YTDLTRLREVIGNIVDNAMKYGDGKWIHVSFYEEDHHSILKLENSGSYIEQSDAGAIFQS FYRGNNVNSHAGNGLGLYICKQLMQKMDGDIFMTQEQGSVSFHLVLGTL >gi|312956307|gb|AENW01000015.1| GENE 8 6941 - 7120 204 59 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1380 NR:ns ## KEGG: Lebu_1380 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 52 10 62 552 70 66.0 1e-11 MKRLPIGVEDFKELVDHQYYYIDKIMFIQDVLKEKVVLYTRPRRFGKTLNMSRRCPPKA >gi|312956307|gb|AENW01000015.1| GENE 9 7210 - 7482 208 90 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0945 NR:ns ## KEGG: Lebu_0945 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 1 88 464 551 552 73 42.0 3e-12 MNNYQILSNQEFGLGRFDLAVLPFYKKKRGFLLELKVASKEEEMEHAAVQACEQIKEKQY LKGLQKKGYTDIVGYGIAFYKKSCLIVALP >gi|312956307|gb|AENW01000015.1| GENE 10 7783 - 8169 307 128 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2371 NR:ns ## KEGG: Cbei_2371 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 1 128 61 183 183 88 34.0 6e-17 MEQAINYWIMEYHREGFVRWSILDCTSSTAIGTMELFKRSANDVYDNTAVLRLDLLSKYE EQSCLQEILSLILPHIRDLFQCTQVITKCVQEAEKRRAVLLEMGFSPSKEPLVGWDGTLY QNYYLRKL >gi|312956307|gb|AENW01000015.1| GENE 11 8244 - 9164 750 306 aa, chain - ## HITS:1 COG:BS_ydhS KEGG:ns NR:ns ## COG: BS_ydhS COG1482 # Protein_GI_number: 16077654 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Bacillus subtilis # 4 298 7 315 315 134 29.0 3e-31 MYIVRPITMETLWGDTRLHAYQGDRAAQTIGCVYTLSGIDGIDCEIYNEKEETTLRRAVK KNPAVFGLEDGEEFPLIIAFDSCAQDVSFQIHPTDTYAKEQLQLPYGKSEAWYFIEKPSE GWVYAENKAGHRAVVEAALQKRDFHGVIDHIPVSENDLVYIRSGMMHALTAGSLIYEIQQ STNITYRLYDYERKDMHGHTRPLHVKEALANLDSSLHVQKQNFSEGSSFDQREFSLRHLT LSGSYTNPYSIASVISVVSGSLQVDTFTVLRGGSILVMPEECIQLTGSAECIIAAAHPYW RAQDQE >gi|312956307|gb|AENW01000015.1| GENE 12 9310 - 10950 1113 546 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2076 NR:ns ## KEGG: CLL_A2076 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 542 3 554 558 408 43.0 1e-112 MKHIPIGIESFKELIDGEYYYVDKTLFIKDVCKEKVALYTRPRRFGKTLNMNMLYYFFSL KQKENAYLFDGLHITKDAEILRYQNQYPVIFITLKDMKQVSFENQKAMFAILIQEIVRNN KELLDSEEVSTFDKEQLVAYSRRTQSDVDLQNALKFLCVCLKQHYHKNVILLIDEYDVPL QSAYLNGYYDEMADFLSGIFSAALKTNDALEKGILTGCLRIAKESIFTGLNNFNVYSITE EPSSTCFGFTPEETLKLLEYYHLKSYEQTVKEWYDGYLFGNKEIYNPWSVLKYVLKILQG NDVPESFWANTSGNDIIYQYIQKADSQMRTDFDTLTSGGRITQTVRYELTYREMDQINNI YSFLLFTGYLKAIACVDKDKAVYQLMIPNKEINRIYTLIFEEWFQEQVKAKSRTLVDAFM KEDVETANEVLNTILFKSISYFDYDEKFYHGMLVGMLSDYQIVSNQETGNGRSDIMVLPA YKKKRGLVLEVKVATKEKDIEITAQRACHQIREMNYIDGLQERGYTDIIGYGIAFYKKTC VIMLAK >gi|312956307|gb|AENW01000015.1| GENE 13 11095 - 11814 838 239 aa, chain + ## HITS:1 COG:SA1939 KEGG:ns NR:ns ## COG: SA1939 COG0274 # Protein_GI_number: 15927711 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Staphylococcus aureus N315 # 10 226 4 218 220 191 47.0 8e-49 MKRWTVEELARMIDHTYVKADATRKQMEKLCKEAREYHFAMAAINSSQTALCAEYLRDSD IHVGAAIGFPLGQTTIAAKVFEAEDAIQNGADEIDYMINLTEVKAGNWEYVKEEMQQIVT VCRNNGKLCKVILETCYLTKDEIKQMCKIAVAVKPDFVKTSTGFGSAGATAEDVALMRRC VGTAVKVKASGGIRDARTFKKMVSSGALRIGTSAGVSIVRELQTEAFKHSGYIAIPEEY >gi|312956307|gb|AENW01000015.1| GENE 14 12282 - 13976 2160 564 aa, chain + ## HITS:1 COG:CAC0273 KEGG:ns NR:ns ## COG: CAC0273 COG0119 # Protein_GI_number: 15893565 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Clostridium acetobutylicum # 20 551 18 555 558 601 55.0 1e-171 MEGYQKYKRQYFLPPEPCMDWAGKEYIEKAPQWCSVDLRDGNQALIIPMSLDEKIEFFQL LVEVGFKEIEIGFPAASQTEFEFLRKLIDEDLIPEDVTVQVLTQAREHIIRRTFEAVKGA KNAVIHLYNSTSLAQREQVFKKSKEEILNIAVEGAKLLKKLTEEDGGNYRFEYSPESFTG TEVDYALEVCNAVLDIWQPTADNKVIINLPVTVEMSMPHIYAQQIEYMCKHMNYRENVIV SLHPHNDRGCGVADTEMGILAGADRIEGTLFGNGERTGNVDIITLAMNMYAMGIDPELNF TDMPHIVEVYERCTRMQVHMRQPYAGQLVFAAFSGSHQDAIAKGMHYRDAQDPDHWTVPY LPIDPRDVGRVYETDVIRINSQSGKGGIGYMLEEYYGYDLPSDMREQVGYYMKGVSDHEH KELLPNEINDLFQKEYMNVNAPYALNDYHFVRQGDIVTVTMNITYEGKTQFITATGNGRL DAVSNALRDNMNLTFDILDYKEHALSKGSSSRAVSYVKIIDCRKKNQWGVGLHDDIIASS VQALFSAINRAVAQRREAEKEAEA >gi|312956307|gb|AENW01000015.1| GENE 15 14003 - 15268 1315 421 aa, chain + ## HITS:1 COG:CAC3173 KEGG:ns NR:ns ## COG: CAC3173 COG0065 # Protein_GI_number: 15896421 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Clostridium acetobutylicum # 3 420 5 421 422 550 67.0 1e-156 MGMTMTQKILAAHAGLDHVEAGQLIEVNLDMVLGNDITSPVAIKEFEKYGFSQVFDPGKI SMVMDHFAPNKDIKAAQQCKACRTFAYAKNIEHFYDVGEMGIEHALLPEKGIVGPGECII GADSHTCTYGALNAFSTGVGSTDMAAGMATGKCWFKIPEAIKFDLRGKLAPHVSGKDVIL HIIGMIGVDGALYKSMEFSGIGLQSLSMDDRLCMANMAIEAGAKNGIFAFDEITEAYVKD RVSRPYVTYEADADAEYCNVYHLDLSQITHTVAFPHLPENTRTMDEIKEPVRIDQVVIGS CTNGRLSDMAEAAQILKGQHVAKGVRAIIIPATQEIYKQCIQLGYTEIFIDAGCVVSTPT CGPCLGGYMGILAENERCVATTNRNFVGRMGHVDSEVYLASPAVAAASAIMGRIAAPKEV A >gi|312956307|gb|AENW01000015.1| GENE 16 15271 - 15765 659 164 aa, chain + ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 1 161 1 161 164 218 65.0 3e-57 MNANGTAHKYGDNVDTDVIIPARYLNTSDPKELAEKCMCDIDADFVKKIKVNDIMVAGFN FGCGSSREHAPIAIKASGISCVIAKSFARIFYRNAINIGLPILECVEASERIDDKDEVEI NFDTGEIINKTKNETYQAQPFPAFIQNIMQHNGLLNAIKEQGGK >gi|312956307|gb|AENW01000015.1| GENE 17 15766 - 16845 1403 359 aa, chain + ## HITS:1 COG:CAC3171 KEGG:ns NR:ns ## COG: CAC3171 COG0473 # Protein_GI_number: 15896419 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Clostridium acetobutylicum # 2 355 3 357 357 400 58.0 1e-111 MEKHIAVIPGDGIGPEIVKEAVKVLDVIAKKYGHRFVYTEVDAGGCAIDKYGTSLPKESL DAALASDSVLLGAVGGPKWDHVDPSIRPEKALLSIRKELGLYANLRPAKIFKELSDASPL RKDIVANGIDFMVVRELIGGVYFGEKSTVEKNGELYASDNMCYYAHEIERIAHTAFQTAR KRGNRVISVDKANVLDTSRLWRKIVSEVAKEYPDVTLTHMLVDNAAMQIVKDPSQFDVVV TENMFGDILSDEASMITGSIGLIPSASLGETKRGMYEPIHGSAPDIAGQNIANPIGTILA AGMMLKYAFDMDQEAAEIEEAVEAALRLGYRTKDIMEDGKTYRTCSQMGDTIAELITNA >gi|312956307|gb|AENW01000015.1| GENE 18 16900 - 18021 1407 373 aa, chain + ## HITS:1 COG:CAC1040 KEGG:ns NR:ns ## COG: CAC1040 COG1228 # Protein_GI_number: 15894327 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Clostridium acetobutylicum # 11 371 22 383 387 367 53.0 1e-101 MAAAGTIQADIRVQNGKIAAIGENLKEETGELIIDASGKQVFPGMIEAHCHLGMEESAIR GEGDDVNEMSDPITPQVRAIDGCNPLDETIINARNAGITTVAAGPGSANVIGGTFMAYKT HGVSIDEMVVQNPVAMKCAFGENPKRVYQDSRIKTRMNIAALLRETLAKTKEYIAKKEAA NNDPLKMPSYDMKLEAMIPVVKKELPLKCHAHRADDILTVIRIAKEFDVNVTLDHCTDGE VIKAQVKASGYPAIVGPSLTHKSKFELANKSFTTPGVLCREGILIAITTDSPVVPQEYLP LCAALAMKDGLPEEEALKAITINPAKILGLEKRIGSIEEGKDGDIIICDSSLLDIQNVIR YTIINGEIAYQKA Prediction of potential genes in microbial genomes Time: Sat May 14 02:07:41 2011 Seq name: gi|312956298|gb|AENW01000016.1| Clostridium sp. HGF2 contig00031, whole genome shotgun sequence Length of sequence - 5656 bp Number of predicted genes - 8, with homology - 7 Number of transcription units - 2, operones - 1 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 86 - 886 239 ## COG3394 Uncharacterized protein conserved in bacteria + Prom 824 - 883 7.5 2 2 Op 1 . + CDS 1030 - 2883 934 ## COG3711 Transcriptional antiterminator 3 2 Op 2 . + CDS 2880 - 3275 320 ## 4 2 Op 3 6/0.000 + CDS 3289 - 3828 542 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 5 2 Op 4 1/0.000 + CDS 3849 - 4397 431 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 6 2 Op 5 6/0.000 + CDS 4456 - 4860 347 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 7 2 Op 6 . + CDS 4867 - 5250 315 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 8 2 Op 7 . + CDS 5267 - 5654 554 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases Predicted protein(s) >gi|312956298|gb|AENW01000016.1| GENE 1 86 - 886 239 266 aa, chain - ## HITS:1 COG:BH0913 KEGG:ns NR:ns ## COG: BH0913 COG3394 # Protein_GI_number: 15613476 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 238 1 208 237 72 27.0 9e-13 MKIIINADDLGLTKESNYGILKAFERGYVTQTTLIVNSRGSREGAAIAHNYGFQDKTGLH LNLSEGFPLTDDIKQYSKYVKNGEFCYIPEFMRKESYTKSPLYTYRDSVSSPAFKKEVFA LRKELEAQIQRFIAFGFTCRHIDSHCNQLVDFPVWLAVRPLLLRYGFTSIRGIYHSFLSD DIYNHIYATWLQSELQSTGLKHLSYISSIPKYLKYKQRLSGESIIELYVHPVLFDDVLID NFTGGISLDDNISQLSTYDPYTYFQL >gi|312956298|gb|AENW01000016.1| GENE 2 1030 - 2883 934 617 aa, chain + ## HITS:1 COG:lin0425_1 KEGG:ns NR:ns ## COG: lin0425_1 COG3711 # Protein_GI_number: 16799502 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 77 405 86 429 519 88 25.0 5e-17 MVITRNQYMILKFLLSNQNKCSYFQLLNQTGCNKEELDAALHDLQYNMRGILRIEKKKEV VKAEIKDKEKLFALMDKKDNILDRNIKEERYNQIVNRLIRYKDKGKGYVSLERLAEDLFI SRSTLIKDMSVVKHSISAYQLSIKGITKKGITINGNETNIRLFILNHFFQLYRDSQVHPV CLHNRILYLIEEIANHFMIDQHTKEIFERVIQITIIRCGFNQHILQSTAYFHSSYQEDPL LVELKAGISALVEINDYDFEFLCFPLYLGSTKRPRNEKSEVDQMLENMLDRIYTEYQFYL DKVFIDEEIKSHLSYMINRILFHMPPSVSMDEKIEANYPFAYQISKSACDVLEQKLQVHI NAQEIAYLALYFQMAIQKKYNASKKFGVVRSTGRSISKLVEDRIRLMFYEGCEFIEIEES QISELNPEEINAIFTLNPIYIDSRIPIILLSNIFDSEYIAHIVNQGEQRTLLANSDIVYH KNIIEVNDRIHAYNQNIVDILANLYKQELINKEFKDVILTLDEKKFSYVSAYMPHAILKG QNKYLLSMTLYLSAKKKQQYQLICLIGIPENVRDGKEFLIVQIYDYIFDIINQFSEASQQ RSDLRTVIEKLEKEGNL >gi|312956298|gb|AENW01000016.1| GENE 3 2880 - 3275 320 131 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSRDVMVIAGLFVAAYLLQFYLSYLQMKHITKQYLELTDKYKGEYFIGMNRKKKIGCNP VVILVTDHRNMIQEFYMLDGLLVTARMRRVNLEEEVDIAELEHHKNYLKGKVGEKGFRAL QNAAENIMNYC >gi|312956298|gb|AENW01000016.1| GENE 4 3289 - 3828 542 179 aa, chain + ## HITS:1 COG:BH0771 KEGG:ns NR:ns ## COG: BH0771 COG3730 # Protein_GI_number: 15613334 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Bacillus halodurans # 1 171 1 171 182 158 46.0 4e-39 MDVIVEFAEGFIGLFKAGAETLVGNITGILPLLAVIITVLNALMALIGEERVAKISKYAG KSVLIRYSLLPIVFTFTMGSPTNFAMGKLLDEKYKPAYCDSLTGMGHPFTGLFPHTNPAE LFVFLGVAQGITKLGLGTTELAVRYLLAGILLGLCRGIITEKVYKMMLNRKRKALHNGE >gi|312956298|gb|AENW01000016.1| GENE 5 3849 - 4397 431 182 aa, chain + ## HITS:1 COG:BH0772 KEGG:ns NR:ns ## COG: BH0772 COG3732 # Protein_GI_number: 15613335 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Bacillus halodurans # 10 182 162 334 335 211 62.0 7e-55 MNKFIDMVSNIATKFGNGFGNVTAVLFQAGRDTVDMILHTVLPFMIFVSALVGIISTSGI GDIIAHFLTPLAGTLPGLFVLSFICSMPFLSPILGPGAVIAQVVGVLIGTEIGSGNISPQ LSLPALFAINSQVAADFLPVALSLADADPETIEIGVPSILMARVVTGPLGVLIGYLLSIG LY >gi|312956298|gb|AENW01000016.1| GENE 6 4456 - 4860 347 134 aa, chain + ## HITS:1 COG:PM1970 KEGG:ns NR:ns ## COG: PM1970 COG3732 # Protein_GI_number: 15603835 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Pasteurella multocida # 11 133 1 122 329 125 52.0 2e-29 MLAYSKRMEEMMNQIIITKGSGGYGGPLVIKPTDKKNKVMYITGGNEPAILKRIVELTGL IPVNGFKTKVPDEEIAVAIVDCGGVVRCGVYPQKGIPTVNTRNTGKAGPFAKFITPEIYV SGVTKDHQIQLLEE >gi|312956298|gb|AENW01000016.1| GENE 7 4867 - 5250 315 127 aa, chain + ## HITS:1 COG:PM1969 KEGG:ns NR:ns ## COG: PM1969 COG3731 # Protein_GI_number: 15603834 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Pasteurella multocida # 7 119 7 119 123 68 33.0 3e-12 MDFKVNTRVKEVGSDAIGFVKENMILFFGDMAPEDLRQYCFILNSHELYEEIQSGDLLLI DGYVYTIEEVGSVANENFKNLGHITLHFQYDESEILGGSIYLKEPLTHELHKDSIIAVKS ASMQDKS >gi|312956298|gb|AENW01000016.1| GENE 8 5267 - 5654 554 129 aa, chain + ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 115 5 117 317 79 35.0 2e-15 MKVVITPRGFANYGLDQVERMKSKGLEVHYNATGKAYTHEEFKALSKDADAIIVGVDKMD REMMEGCPNLKAVCKFGVGTDNIDLDYAKERNIHVGRCVGSNSRSVAEHVLSMMFMEAKN LYTSVRDVK Prediction of potential genes in microbial genomes Time: Sat May 14 02:07:48 2011 Seq name: gi|312956296|gb|AENW01000017.1| Clostridium sp. HGF2 contig00076, whole genome shotgun sequence Length of sequence - 1122 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 73 - 132 2.9 1 1 Tu 1 . + CDS 155 - 1121 275 ## DSY2934 hypothetical protein Predicted protein(s) >gi|312956296|gb|AENW01000017.1| GENE 1 155 - 1121 275 322 aa, chain + ## HITS:1 COG:no KEGG:DSY2934 NR:ns ## KEGG: DSY2934 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 314 54 370 434 217 38.0 4e-55 MAGKPIREELLDFFHYSNNTPTASALVQARSKISSRVFQYILNELNKAFPPDNLYKGYHL IAVDGSEMQIPLDFSDPDTLHKSASKGKFLSAFHLNVSYDVLNHRYLDTIVQGIHSKNEV EAMWKIVERFHDDNAIFIADRNYATWNTMAHIIQSGKSFLIRVKDIHSISSLLRKFNLPD EEFDLDLHITLTRKQTKDIKSQPEKYRFLSTTSTFDFIDEHNPEYVLHFRVVRFKLDGSE EYESIITNLSRDEFSKDEIKEIYNTRWGIELSFRDLKYSADLCAVHAKKRESIQQEIWAR MILYNISFIMAHHIINKKPKGK Prediction of potential genes in microbial genomes Time: Sat May 14 02:07:53 2011 Seq name: gi|312956294|gb|AENW01000018.1| Clostridium sp. HGF2 contig00047, whole genome shotgun sequence Length of sequence - 1663 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 410 - 469 1.6 1 1 Tu 1 . + CDS 502 - 1614 172 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|312956294|gb|AENW01000018.1| GENE 1 502 - 1614 172 370 aa, chain + ## HITS:1 COG:FN0599 KEGG:ns NR:ns ## COG: FN0599 COG3464 # Protein_GI_number: 19703934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 7 336 129 418 428 82 25.0 1e-15 MKDLDRSTASIARQFNLSDTQVHDLFTAYVDLPRLTLPEFLSVDEVHIDISEKEKYALIL MDFTSGEIVDILHNRWHHTIENYFFSIPYEERKHIRYIISDAYKPYLELPKHFFPNAVSI LDSFHVVKYLLGLINTYINSVMKAYKDRDLKRLEKQNHDTNRDNKTIQESQEVILLRKYR WVLLKNQDNINYSDKRYYHSSLRMYADTYTIEKLFLSLDPKFNIIRDVKEKYIRFNNTHF SSEDEVMQELLKMIEEFKALRGYIPCLFSQYLDKYKHEIARSFTITEVSRRSAKDNERYY ARLSNGPMESFNRKPKDYKRNSRGSSNFNYTRNRILWSTRNRPALRNTPKSSNEVHSYVG KKRGKYKVKE Prediction of potential genes in microbial genomes Time: Sat May 14 02:08:43 2011 Seq name: gi|312956108|gb|AENW01000019.1| Clostridium sp. HGF2 contig00022, whole genome shotgun sequence Length of sequence - 170958 bp Number of predicted genes - 177, with homology - 159 Number of transcription units - 74, operones - 40 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 99 - 605 593 ## COG0225 Peptide methionine sulfoxide reductase - Prom 706 - 765 3.8 2 2 Tu 1 . - CDS 770 - 1684 772 ## COG0524 Sugar kinases, ribokinase family - Prom 1723 - 1782 4.8 - Term 1821 - 1863 3.1 3 3 Op 1 . - CDS 1873 - 3672 1635 ## COG0514 Superfamily II DNA helicase 4 3 Op 2 . - CDS 3738 - 4451 555 ## COG2188 Transcriptional regulators - Prom 4472 - 4531 4.1 5 4 Op 1 13/0.000 - CDS 4599 - 5417 951 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 6 4 Op 2 13/0.000 - CDS 5432 - 6184 864 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 7 4 Op 3 9/0.000 - CDS 6203 - 6679 450 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 8 4 Op 4 . - CDS 6703 - 7098 378 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 9 4 Op 5 . - CDS 7118 - 8281 668 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 10 4 Op 6 . - CDS 8295 - 9002 541 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 11 4 Op 7 . - CDS 8999 - 9736 612 ## COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 12 4 Op 8 . - CDS 9786 - 10283 197 ## - Prom 10346 - 10405 6.8 - Term 10511 - 10556 6.6 13 5 Op 1 . - CDS 10616 - 11431 475 ## COG1737 Transcriptional regulators - Prom 11467 - 11526 4.4 14 5 Op 2 . - CDS 11529 - 12767 973 ## COG0285 Folylpolyglutamate synthase 15 5 Op 3 . - CDS 12764 - 13423 500 ## COG0692 Uracil DNA glycosylase - Prom 13491 - 13550 6.7 + Prom 13399 - 13458 7.6 16 6 Tu 1 . + CDS 13586 - 13819 89 ## 17 7 Op 1 1/0.000 - CDS 14087 - 14635 405 ## COG2068 Uncharacterized MobA-related protein 18 7 Op 2 11/0.000 - CDS 14625 - 16901 2460 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 19 7 Op 3 15/0.000 - CDS 16898 - 17359 491 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 20 7 Op 4 . - CDS 17356 - 18129 942 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 21 7 Op 5 35/0.000 - CDS 18086 - 18904 912 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 22 7 Op 6 33/0.000 - CDS 18901 - 19869 963 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 23 7 Op 7 . - CDS 19871 - 20875 1208 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 24 7 Op 8 . - CDS 20879 - 21382 625 ## CLH_0592 hypothetical protein 25 7 Op 9 . - CDS 21384 - 22694 464 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 22721 - 22780 2.9 - Term 22706 - 22740 1.1 26 8 Tu 1 . - CDS 22868 - 23071 117 ## - Prom 23098 - 23157 6.6 + Prom 23069 - 23128 7.8 27 9 Op 1 . + CDS 23164 - 24681 1570 ## Sterm_0908 protein of unknown function DUF1538 28 9 Op 2 . + CDS 24662 - 25324 750 ## Sterm_0909 hypothetical protein + Term 25376 - 25420 7.5 - Term 25373 - 25400 0.1 29 10 Op 1 2/0.000 - CDS 25499 - 26560 1213 ## COG3212 Predicted membrane protein 30 10 Op 2 40/0.000 - CDS 26637 - 28043 1515 ## COG0642 Signal transduction histidine kinase 31 10 Op 3 . - CDS 28040 - 28768 780 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 28791 - 28850 5.1 - Term 28916 - 28957 4.3 32 11 Op 1 . - CDS 28970 - 29659 909 ## gi|293399927|ref|ZP_06644073.1| hypothetical protein HMPREF0863_00210 33 11 Op 2 . - CDS 29717 - 30946 1018 ## EUBELI_00456 hypothetical protein 34 11 Op 3 . - CDS 30943 - 31650 813 ## COG3279 Response regulator of the LytR/AlgR family - Prom 31843 - 31902 7.1 - Term 31884 - 31921 -0.0 35 12 Tu 1 . - CDS 31931 - 32350 190 ## gi|257468155|ref|ZP_05632251.1| hypothetical protein FulcA4_02387 - Prom 32407 - 32466 4.7 - Term 32744 - 32781 -1.0 36 13 Op 1 . - CDS 32812 - 33735 1003 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis 37 13 Op 2 . - CDS 33728 - 34690 803 ## COG1184 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 38 13 Op 3 7/0.000 - CDS 34705 - 36090 1460 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 39 13 Op 4 7/0.000 - CDS 36114 - 36971 1031 ## COG3711 Transcriptional antiterminator 40 13 Op 5 1/0.000 - CDS 36968 - 37492 278 ## COG2190 Phosphotransferase system IIA components - Prom 37587 - 37646 6.2 - Term 37819 - 37867 3.4 41 13 Op 6 . - CDS 37891 - 38745 869 ## COG1737 Transcriptional regulators - Prom 38858 - 38917 6.1 42 14 Op 1 . - CDS 38989 - 39639 715 ## COG0637 Predicted phosphatase/phosphohexomutase 43 14 Op 2 . - CDS 39655 - 40056 265 ## gi|160915483|ref|ZP_02077694.1| hypothetical protein EUBDOL_01491 44 14 Op 3 4/0.000 - CDS 40076 - 40489 457 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 45 14 Op 4 13/0.000 - CDS 40595 - 41416 1131 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 46 14 Op 5 13/0.000 - CDS 41420 - 42184 867 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 47 14 Op 6 . - CDS 42207 - 42683 611 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 48 14 Op 7 . - CDS 42719 - 43741 1197 ## COG0673 Predicted dehydrogenases and related proteins - Prom 43766 - 43825 8.0 49 15 Tu 1 . - CDS 44174 - 46264 1876 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 46284 - 46343 3.6 50 16 Op 1 . - CDS 46514 - 47353 669 ## COG2207 AraC-type DNA-binding domain-containing proteins 51 16 Op 2 1/0.000 - CDS 47410 - 48870 949 ## COG3894 Uncharacterized metal-binding protein 52 16 Op 3 . - CDS 48867 - 49502 867 ## COG5012 Predicted cobalamin binding protein 53 16 Op 4 . - CDS 49495 - 50583 1113 ## Caka_0351 uroporphyrinogen-III decarboxylase-like protein 54 16 Op 5 . - CDS 50573 - 51601 762 ## COG0407 Uroporphyrinogen-III decarboxylase - Prom 51823 - 51882 3.4 + Prom 51784 - 51843 5.8 55 17 Tu 1 . + CDS 51934 - 53184 656 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 53298 - 53333 1.3 - Term 53277 - 53329 14.4 56 18 Op 1 . - CDS 53475 - 54920 1655 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 57 18 Op 2 . - CDS 54917 - 55573 496 ## CPE1169 hypothetical protein 58 19 Op 1 2/0.000 - CDS 55706 - 57145 2016 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 59 19 Op 2 13/0.000 - CDS 57157 - 57495 570 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 60 19 Op 3 10/0.000 - CDS 57510 - 58763 1491 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 58799 - 58858 3.8 61 19 Op 4 . - CDS 58877 - 59191 447 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 59359 - 59418 6.9 + Prom 59440 - 59499 5.7 62 20 Op 1 1/0.000 + CDS 59530 - 61458 1756 ## COG3711 Transcriptional antiterminator 63 20 Op 2 . + CDS 61455 - 62285 646 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 62301 - 62360 9.5 64 21 Tu 1 . + CDS 62600 - 62749 146 ## + Term 62807 - 62857 2.2 + Prom 62874 - 62933 6.7 65 22 Tu 1 . + CDS 62979 - 63155 223 ## + Term 63180 - 63212 1.6 + Prom 63395 - 63454 6.7 66 23 Op 1 1/0.000 + CDS 63670 - 64176 313 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Prom 64192 - 64251 2.6 67 23 Op 2 . + CDS 64441 - 64977 283 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 68 24 Tu 1 . - CDS 65239 - 66111 644 ## COG1284 Uncharacterized conserved protein - Prom 66134 - 66193 4.4 + Prom 66705 - 66764 2.7 69 25 Op 1 . + CDS 66784 - 68697 1823 ## COG3711 Transcriptional antiterminator 70 25 Op 2 . + CDS 68709 - 69401 398 ## Cbei_2704 RDD domain-containing protein + Term 69418 - 69451 3.1 + Prom 69695 - 69754 7.6 71 26 Tu 1 . + CDS 69812 - 71173 1118 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Prom 71244 - 71303 4.7 72 27 Op 1 . + CDS 71542 - 71871 360 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 73 27 Op 2 . + CDS 71873 - 72397 564 ## CDR20291_0137 hypothetical protein + Term 72417 - 72456 5.1 + Prom 72449 - 72508 4.7 74 28 Op 1 2/0.000 + CDS 72530 - 73594 1018 ## COG1363 Cellulase M and related proteins 75 28 Op 2 . + CDS 73604 - 74695 925 ## COG1363 Cellulase M and related proteins + Term 74697 - 74724 0.1 76 29 Tu 1 . - CDS 75334 - 76797 1123 ## COG5476 Uncharacterized conserved protein - Prom 76826 - 76885 2.6 77 30 Tu 1 . - CDS 77069 - 78847 1275 ## COG1164 Oligoendopeptidase F + Prom 78957 - 79016 6.6 78 31 Op 1 8/0.000 + CDS 79052 - 79381 443 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 79 31 Op 2 1/0.000 + CDS 79400 - 79720 281 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Term 79779 - 79819 9.2 80 31 Op 3 . + CDS 80120 - 81214 1159 ## COG3589 Uncharacterized conserved protein + Term 81385 - 81423 0.0 + Prom 81424 - 81483 4.6 81 32 Op 1 . + CDS 81582 - 82538 941 ## COG1446 Asparaginase 82 32 Op 2 . + CDS 82540 - 83649 661 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 83 32 Op 3 . + CDS 83695 - 84438 606 ## COG3142 Uncharacterized protein involved in copper resistance + Term 84451 - 84485 -0.5 84 33 Tu 1 . - CDS 84768 - 85865 1248 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 85891 - 85950 6.7 + Prom 85948 - 86007 9.3 85 34 Op 1 1/0.000 + CDS 86243 - 87529 1520 ## COG0019 Diaminopimelate decarboxylase 86 34 Op 2 . + CDS 87526 - 88725 1416 ## COG0527 Aspartokinases 87 34 Op 3 1/0.000 + CDS 88722 - 89543 867 ## COG0253 Diaminopimelate epimerase 88 34 Op 4 6/0.000 + CDS 89536 - 90417 1051 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 89 34 Op 5 2/0.000 + CDS 90411 - 91130 829 ## COG0289 Dihydrodipicolinate reductase 90 34 Op 6 . + CDS 91140 - 91832 748 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 91841 - 91890 6.4 + Prom 91937 - 91996 5.4 91 35 Tu 1 . + CDS 92056 - 92520 285 ## + Term 92556 - 92596 4.3 92 36 Tu 1 . - CDS 92521 - 93708 1013 ## gi|293399858|ref|ZP_06644004.1| hypothetical protein HMPREF0863_00141 - Prom 93803 - 93862 6.6 + Prom 93685 - 93744 4.5 93 37 Op 1 . + CDS 93840 - 95852 1779 ## COG0366 Glycosidases 94 37 Op 2 . + CDS 95926 - 96534 768 ## COG1739 Uncharacterized conserved protein + Term 96582 - 96615 0.3 - Term 96987 - 97035 6.0 95 38 Op 1 . - CDS 97040 - 97561 490 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 96 38 Op 2 . - CDS 97637 - 98473 1073 ## gi|293399863|ref|ZP_06644009.1| conserved hypothetical protein - Prom 98616 - 98675 6.0 - Term 98855 - 98881 -1.0 97 39 Tu 1 . - CDS 98886 - 99494 360 ## COG0775 Nucleoside phosphorylase - Prom 99632 - 99691 4.1 - Term 99524 - 99565 -1.0 98 40 Op 1 . - CDS 99783 - 101009 1013 ## 99 40 Op 2 . - CDS 101006 - 101494 584 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 100 40 Op 3 . - CDS 101559 - 102716 338 ## gi|291459172|ref|ZP_06598562.1| hypothetical protein GCWU000341_01333 - Prom 102758 - 102817 7.1 + Prom 102725 - 102784 9.3 101 41 Op 1 3/0.000 + CDS 102951 - 103439 704 ## COG1522 Transcriptional regulators 102 41 Op 2 . + CDS 103439 - 104608 1319 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 104684 - 104728 0.3 103 42 Op 1 . - CDS 104794 - 105696 903 ## 104 42 Op 2 . - CDS 105748 - 107124 1389 ## COG0534 Na+-driven multidrug efflux pump - Prom 107144 - 107203 5.6 + Prom 107464 - 107523 5.8 105 43 Tu 1 . + CDS 107543 - 109030 846 ## COG3711 Transcriptional antiterminator - Term 109030 - 109062 1.0 106 44 Op 1 . - CDS 109069 - 109884 569 ## COG0561 Predicted hydrolases of the HAD superfamily 107 44 Op 2 . - CDS 109877 - 110995 1362 ## COG1454 Alcohol dehydrogenase, class IV - Prom 111145 - 111204 4.8 + Prom 111121 - 111180 7.5 108 45 Tu 1 . + CDS 111200 - 111832 855 ## COG0176 Transaldolase + Term 111870 - 111913 0.8 - Term 111861 - 111898 2.1 109 46 Op 1 10/0.000 - CDS 112020 - 112643 619 ## COG2376 Dihydroxyacetone kinase 110 46 Op 2 . - CDS 112655 - 113665 848 ## COG2376 Dihydroxyacetone kinase 111 46 Op 3 . - CDS 113646 - 114275 414 ## COG0406 Fructose-2,6-bisphosphatase 112 46 Op 4 1/0.000 - CDS 114280 - 114948 787 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 113 46 Op 5 . - CDS 114942 - 117020 1602 ## COG3711 Transcriptional antiterminator - Term 117032 - 117077 1.2 114 47 Op 1 10/0.000 - CDS 117098 - 118096 855 ## COG2376 Dihydroxyacetone kinase 115 47 Op 2 . - CDS 118080 - 118751 428 ## COG2376 Dihydroxyacetone kinase 116 47 Op 3 10/0.000 - CDS 118754 - 120133 1464 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 117 47 Op 4 . - CDS 120166 - 120450 351 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 118 47 Op 5 13/0.000 - CDS 120463 - 120747 194 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 119 47 Op 6 . - CDS 120747 - 121211 626 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 121274 - 121333 7.0 - Term 121555 - 121596 5.2 120 48 Tu 1 . - CDS 121614 - 122207 713 ## COG1435 Thymidine kinase - Prom 122353 - 122412 6.7 - Term 122365 - 122413 7.2 121 49 Tu 1 . - CDS 122418 - 122621 290 ## PROTEIN SUPPORTED gi|167754815|ref|ZP_02426942.1| hypothetical protein CLORAM_00319 - Prom 122669 - 122728 8.4 + Prom 122848 - 122907 5.1 122 50 Tu 1 . + CDS 122985 - 123932 861 ## PST_3826 hypothetical protein + Term 124014 - 124055 5.6 - Term 124117 - 124155 -0.8 123 51 Op 1 . - CDS 124218 - 125735 1266 ## Cphy_2321 hypothetical protein 124 51 Op 2 8/0.000 - CDS 125695 - 126588 1063 ## COG1131 ABC-type multidrug transport system, ATPase component 125 51 Op 3 . - CDS 126581 - 126955 403 ## COG1725 Predicted transcriptional regulators - Prom 127154 - 127213 3.7 - Term 127102 - 127151 8.1 126 52 Tu 1 . - CDS 127221 - 128285 1166 ## COG4859 Uncharacterized protein conserved in bacteria - Prom 128311 - 128370 7.3 127 53 Op 1 . - CDS 128485 - 129015 616 ## Ccur_04340 predicted transcriptional regulator 128 53 Op 2 . - CDS 129015 - 129560 642 ## COG0789 Predicted transcriptional regulators 129 53 Op 3 1/0.000 - CDS 129644 - 130420 854 ## COG1737 Transcriptional regulators - Prom 130440 - 130499 4.4 - Term 130504 - 130559 10.8 130 54 Op 1 2/0.000 - CDS 130591 - 131916 1735 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 131 54 Op 2 . - CDS 131973 - 133547 1994 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 133597 - 133656 3.8 132 55 Tu 1 . - CDS 134164 - 134475 323 ## Clos_2843 hypothetical protein - Prom 134601 - 134660 7.2 + Prom 134531 - 134590 7.3 133 56 Tu 1 . + CDS 134763 - 135299 574 ## COG0655 Multimeric flavodoxin WrbA + Term 135320 - 135362 6.0 134 57 Tu 1 . - CDS 135430 - 135951 196 ## MARTH_orf136 hypothetical protein - Prom 135989 - 136048 6.3 - Term 136180 - 136212 -0.9 135 58 Tu 1 . - CDS 136289 - 136504 74 ## 136 59 Op 1 . - CDS 136555 - 136746 180 ## 137 59 Op 2 . - CDS 136747 - 138720 2520 ## COG0143 Methionyl-tRNA synthetase - Prom 138962 - 139021 6.2 138 60 Op 1 . + CDS 139323 - 140576 1265 ## BLA_0104 oxidoreductase 139 60 Op 2 . + CDS 140591 - 140830 241 ## 140 61 Op 1 . - CDS 140964 - 142022 1090 ## COG3945 Uncharacterized conserved protein 141 61 Op 2 . - CDS 142015 - 143736 1838 ## COG1151 6Fe-6S prismane cluster-containing protein 142 61 Op 3 . - CDS 143738 - 144040 399 ## NT05HA_0241 cupin 2, conserved barrel 143 61 Op 4 . - CDS 144101 - 144691 720 ## Ddes_1827 transcriptional regulator, Crp/Fnr family 144 61 Op 5 . - CDS 144715 - 145566 722 ## COG2362 D-aminopeptidase 145 61 Op 6 . - CDS 145559 - 145879 413 ## COG1694 Predicted pyrophosphatase - Prom 145947 - 146006 2.4 146 62 Tu 1 . - CDS 146047 - 146373 168 ## - Prom 146499 - 146558 4.3 - Term 146630 - 146670 4.1 147 63 Tu 1 . - CDS 146684 - 146839 164 ## gi|293399764|ref|ZP_06643910.1| putative PHP domain protein - Prom 146872 - 146931 7.9 + Prom 147461 - 147520 6.4 148 64 Tu 1 . + CDS 147544 - 147942 168 ## + Term 147957 - 147991 -0.4 149 65 Op 1 . + CDS 148788 - 149303 -83 ## 150 65 Op 2 . + CDS 149317 - 149925 195 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 151 65 Op 3 . + CDS 149909 - 150415 65 ## 152 66 Op 1 . - CDS 150571 - 150732 67 ## 153 66 Op 2 . - CDS 150762 - 152246 1567 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 154 66 Op 3 . - CDS 152251 - 152562 194 ## gi|293399765|ref|ZP_06643911.1| hypothetical protein HMPREF0863_00048 + Prom 152848 - 152907 4.5 155 67 Tu 1 . + CDS 152927 - 153622 639 ## gi|293399766|ref|ZP_06643912.1| VanZ like family protein + Prom 153792 - 153851 6.3 156 68 Tu 1 . + CDS 153887 - 154816 774 ## BT_3685 hypothetical protein - Term 154783 - 154831 3.2 157 69 Op 1 . - CDS 154842 - 155237 351 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 158 69 Op 2 . - CDS 155237 - 156037 840 ## COG0434 Predicted TIM-barrel enzyme 159 69 Op 3 . - CDS 156030 - 157016 704 ## Tagg_0676 initiation factor 2B-like protein 160 69 Op 4 . - CDS 157026 - 157742 554 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 161 69 Op 5 13/0.000 - CDS 157755 - 158570 1020 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 162 69 Op 6 13/0.000 - CDS 158575 - 159324 867 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 163 69 Op 7 . - CDS 159346 - 159813 588 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 164 69 Op 8 . - CDS 159810 - 160556 568 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold - Prom 160606 - 160665 8.9 - Term 160916 - 160951 -0.6 165 70 Tu 1 . - CDS 160955 - 161686 456 ## COG2188 Transcriptional regulators - Prom 161716 - 161775 8.3 - Term 161953 - 161991 2.9 166 71 Op 1 12/0.000 - CDS 161998 - 162957 965 ## COG3958 Transketolase, C-terminal subunit 167 71 Op 2 . - CDS 162959 - 163813 1027 ## COG3959 Transketolase, N-terminal subunit - Prom 163898 - 163957 5.2 - Term 163938 - 163984 5.9 168 72 Op 1 11/0.000 - CDS 163992 - 164270 172 ## PROTEIN SUPPORTED gi|15901944|ref|NP_346548.1| PTS system, IIB component, putative 169 72 Op 2 2/0.000 - CDS 164296 - 165720 1492 ## COG3037 Uncharacterized protein conserved in bacteria 170 72 Op 3 5/0.000 - CDS 165753 - 166202 537 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 166227 - 166286 2.5 171 72 Op 4 . - CDS 166332 - 168365 2247 ## COG3711 Transcriptional antiterminator 172 72 Op 5 . - CDS 168393 - 168539 114 ## 173 72 Op 6 . - CDS 168464 - 169063 371 ## gi|218283690|ref|ZP_03489651.1| hypothetical protein EUBIFOR_02245 - Prom 169166 - 169225 7.5 - Term 169321 - 169347 -1.0 174 73 Tu 1 . - CDS 169364 - 170233 706 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 170303 - 170362 4.1 175 74 Op 1 . - CDS 170398 - 170544 65 ## 176 74 Op 2 . - CDS 170495 - 170815 372 ## BcerKBAB4_5137 DNA-directed RNA polymerase subunit delta 177 74 Op 3 . - CDS 170834 - 170956 62 ## gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase Predicted protein(s) >gi|312956108|gb|AENW01000019.1| GENE 1 99 - 605 593 168 aa, chain - ## HITS:1 COG:CAC0088 KEGG:ns NR:ns ## COG: CAC0088 COG0225 # Protein_GI_number: 15893384 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Clostridium acetobutylicum # 1 160 1 160 162 180 55.0 1e-45 MKEIYLAGGCFWGMQAYFEQLQGIVATEVGYANGHVENPTYEMVCSGTTGYAEALHIQYD ALVITLRFLLSLYYDVIDPTSYHRQGNDIGEQYRTGIYYVDEADQPVIEASLQELAKCYE EPIVVEMKPLTSFCSAEEYHQEYLKKNPGGYCHISRDKIQTVKDRKLG >gi|312956108|gb|AENW01000019.1| GENE 2 770 - 1684 772 304 aa, chain - ## HITS:1 COG:STM4024 KEGG:ns NR:ns ## COG: STM4024 COG0524 # Protein_GI_number: 16767289 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 3 295 4 295 298 92 27.0 1e-18 MSIICIGQCAYDLTFPIQEPLIENQKYRIMEPFSCIGAPAANAAYLCALWNAETVLISRC GKDFYGAEIRRVLKEAGVDTAYLMEDESFSTPVSAIIANSFNGYRTIFNCPGIQRKLEFH YPEQAEILLLDGHELQASLEALSRYPDIDSIMDAGTFHEETSVLAQKVTYLVCSQDYARQ FSNIEVSIQDENSWRQTFDALHALNAGHIVVTLGDQGLLYEDTQGIHHIEAFNVSAVDTT GAGDIFHGAFTYCIHKSYPLQDALIIASATSAISVQTLGGQTSIPTKAAVNRFLNEQCCH LILK >gi|312956108|gb|AENW01000019.1| GENE 3 1873 - 3672 1635 599 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 4 597 6 588 714 570 46.0 1e-162 MKDYEVLKKYFGYESFREGQQELITNILERHDVLGIMPTGAGKSICYQVPAVMLEGITLV ISPLISLMKDQVGTLNEAGIRAAYLNSSLSYAQYRKALSLARGYTYKIIYVAPERLMSDE FLSFAKEMKISMVCVDEAHCVSQWGQDFRPHYLHIREFLKEMPQRPIVSAFTATATTQVK EDILQLLDMKDPYTITTGFDRKNLYFAVEKPKDKYQALLHYVKQHTEDAGIVYCLSRKTV EEVCDRLCADGFAATRYHAGLSDAERMNNQDDFIYDRKTIMVATNAFGMGIDKSNVRFVV HFNMPKNMESYYQEAGRAGRDGEQADCILLYSGKDVRLNQFLIEQGSGHEDMEEAVRMEL QQKEKERLKSMTFYCTIPSCLRHYMLKYFGEESDGFCGSCSNCLTQYEECDIRMEASRLV ECIRHSGERFGKTMIVDIVKGSANAKIKSYHLDRNPAYGSLKDSSRNHLYEILQHLQFQG ILKQSEDGYSVLSIHQEELLPTDGPLMMKIVKEKQVQNPVVQTDSGDNRLFELLRICRSQ LARKAHVPPYMVFSDKTLHDMCAKAPHSREEMLGVSGVGEVKYDKYGEAFLKVIASFDS >gi|312956108|gb|AENW01000019.1| GENE 4 3738 - 4451 555 237 aa, chain - ## HITS:1 COG:BS_yurK KEGG:ns NR:ns ## COG: BS_yurK COG2188 # Protein_GI_number: 16080309 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 6 194 9 192 242 107 32.0 2e-23 MENKIPIYRQIEQYIMNNIEDGIYAEGMMIPSEEDFCEKFHTSRMTVRKAFDILQTKGIL HKKKGKGTFVSTFSIEKNMQTIHGWKETMQMAGYRTRSDLLKIAMEKADEKIAKKLHMKE GDFVYIIIRLRYANDTPILIEKAHLNAFMFPNLLQITFEEQSLYDILKRNYQLHIHHVCQ KVLTQKLNGAYAQQLFQEDEATALVMENISYDDREIPLEYTISYINGELYSLNYYVT >gi|312956108|gb|AENW01000019.1| GENE 5 4599 - 5417 951 272 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 4 265 6 267 277 165 37.0 1e-40 MTILSKKDVRKCYVNWITFALGCQNMERMMAPAFVRMFGLVSEKLYDSKEEQQKLLDRHT QFFNTEEAFGSIIPGVILGMEEKRAEGEEIPDELIQSTKTALMGPFAGMGDSLIGGTLRP ILCSIAMGLSASTGSIAGPLFYCVAWLGIIIPGTWLLFSRGYKLGINAADVLFVGGRKDI ITRAANIVGLIVVGAISAQYVSAVSGWSYRSGDMLFSLQGILDSIMPGLLPLGLTLLAWI LLDKKNMKITTVFIIFILIAIVGGLSELLIVA >gi|312956108|gb|AENW01000019.1| GENE 6 5432 - 6184 864 250 aa, chain - ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 1 226 3 239 281 116 35.0 3e-26 MTLLQALLIALLGYLGSIYGTFLLGTVGGWNMIGRPIVAGALIGLILGDVKNGVLIGAAI QALYVGLVTPGMSVPGDVNFASYIGIPLALVSNASPEYAVGISVPLSLLGVAAVYSVATF NAVFVHLQDRWIEEGKLKQATRIPIYSNISQFVVRFIPIFLACYFGADYVPKMIALIPDQ LGVIFQVLGGILPAVGFALLIKFTLKKNIELLYVLVGFIMMAVLKMPIVAITVLAAFIAY LDYLRCVKQS >gi|312956108|gb|AENW01000019.1| GENE 7 6203 - 6679 450 158 aa, chain - ## HITS:1 COG:CAC1458 KEGG:ns NR:ns ## COG: CAC1458 COG3444 # Protein_GI_number: 15894737 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Clostridium acetobutylicum # 1 156 1 156 164 66 31.0 2e-11 MGITVLRCDDRLIHGQCIVKVLNDYKIDYIILVDAFTASNPVMSNIYKMSVPPNVHLDVA SAQSAIALIEQAEKSSERTLVLVKDPIIALELQKNCTVLPKALNIGPMSNRKGTKKATYF SYLLDSEAAACEELHAMGIRVYFQQVPGEKEMEWKEAF >gi|312956108|gb|AENW01000019.1| GENE 8 6703 - 7098 378 131 aa, chain - ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 111 1 113 144 75 37.0 2e-14 MIGGIIATHAGLANGFLEAVEMIAGKQENLLAVSLREGDGLEILIERLQKAAAAMEGEEL VIFTDLFGATPFHAASVLSAQTGCHVVCGVNLALLLDFAVKRESISLQDMRDSLQAVSKT DYRWIEQSDII >gi|312956108|gb|AENW01000019.1| GENE 9 7118 - 8281 668 387 aa, chain - ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 1 382 1 382 384 293 36.0 4e-79 MYTFDELIDRRHTESTKWDRYQDKLQRDDLLPMWLADMDLPASDEIKEALMKRASHPIYG YSDRGRLYYEVFAERFQKQYAYDITADDVMLSTGVMYSIAAAIHLFTNPKDGILLLMPCY HPFVTCVENSDRRVIQVDMCVHDQQYEIDFEQLENRLKKDDTVKALILCNPHNPSGRVFR YEELKRLSEICEKYHLLIISDEIHSDFVYEAKFIPIMKVSTYARQHTIACVSPTKSFNLA GLKVSAILVKNESMKKKLKDYCSLIGISSINIFAMEAVKAAYLKSNDWQQALLTYLKDNR NLITAFVKRHADQIVAFQPQGTYFYWMKFHADIHERLLNEAGLILNHGAEFSSSCAAYER LNFACPRPLLQEGLRRLDTLLKEIENE >gi|312956108|gb|AENW01000019.1| GENE 10 8295 - 9002 541 235 aa, chain - ## HITS:1 COG:lin2933 KEGG:ns NR:ns ## COG: lin2933 COG3010 # Protein_GI_number: 16801992 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Listeria innocua # 6 235 5 230 231 147 35.0 1e-35 MTKREILQRLKGQLIVSCQAYEDNPLYGTENMVTMAKCVLAGGAKGIRACWPENVRAIRA LTDAPLIGINKVMPSADTDFYDSVFITPNYESAVAVIEAGCDVVALDGTLRGRNEKELTE LVQRLKAAYPDIVLMADLATVEEGIICEKAGFDILSSTLSGYTRDTMHNNLGGPDIQLIR ELKSRTSCLVNGEGKIWDSKQLRDVWAAGADMVTMGSAITNPMKTTAYLIDQMKK >gi|312956108|gb|AENW01000019.1| GENE 11 8999 - 9736 612 245 aa, chain - ## HITS:1 COG:BH3325 KEGG:ns NR:ns ## COG: BH3325 COG4821 # Protein_GI_number: 15615887 # Func_class: R General function prediction only # Function: Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain # Organism: Bacillus halodurans # 12 238 15 241 242 193 42.0 2e-49 MINKVFETGFDVLNKVRETQQEQLDHAAKLIADCFLAHKTFYVTGSGHSHTLCEEFYGRA GGLAFVVPIMTSELTMTEHPTKSSFLERLSGYAAILADLYDIEEGDVVLIASNSGRNAYP IEMAIEARKRGASVIAITNIAHSNAVSSRHESGKMLMDIADIVIDNCGVPGDCAVQMEGV AAAVCPTSSMANTFIAQAISVQCAYYIKEKGVTPPVFVSLNSEGTEHVNDEYFEKYTRMY KKARL >gi|312956108|gb|AENW01000019.1| GENE 12 9786 - 10283 197 165 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQISYELDYRDAARFTLYRSLENADVKRRKTVLRWMVAIMLLASIPAFQLKHPAAISLVL VICFLWLAFCDTFMNHILLKQILKEHKEITYERIEIVSAKESLLIHTGKKQHSYPYEEIT HFLYFKKLLLLTLYDGSSILIPRHAFNSNHDYKAFYMHILNHCPQ >gi|312956108|gb|AENW01000019.1| GENE 13 10616 - 11431 475 271 aa, chain - ## HITS:1 COG:L192289 KEGG:ns NR:ns ## COG: L192289 COG1737 # Protein_GI_number: 15673158 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 269 1 273 273 140 31.0 3e-33 MQTLGIIESYYPSFTKSEKRIADFIIESNSKVIDLTLSELAVMLNVGEATIVRFCRKMKL KGFQELKFLLAIDDDGKQQETDKHECIKNNLIQTIQITDSMIQQEEINHAIQLIEEAEYI YFFGIGTSGFAASMGESRLFRFGKQTKAVTDSHRQLMQASLCNEKNLIIIVSVSGETKDL IEAAEVAIKTGCKIITITNHITSTLAKLSDCVIISYGKVNLMNAGTFSSMVSQLFILDIL TSGYGLHNAGSVRIARENIARVIYGKTRDES >gi|312956108|gb|AENW01000019.1| GENE 14 11529 - 12767 973 412 aa, chain - ## HITS:1 COG:BS_folC KEGG:ns NR:ns ## COG: BS_folC COG0285 # Protein_GI_number: 16079860 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Bacillus subtilis # 3 405 2 429 430 270 39.0 3e-72 MRFQKAEDVIAIIEQRKNRGYGLDHFKQYMASLGNPQNRLRSIHIAGTNGKGSTTNDIRS ILQAAGYKVGSFTSPFMITHLDRIRINNQDIREEAFLGITNRYYDSWMEWDLSMFEIDMC IAVFYYLEEQVDFCVFETGLGGRKDATNILQPLVSVITNIGMDHMEFLGDTLEKIAKEKA GIVKEGIDLITAEDKECCLQVFQKHTASAHAQCIKAGEISNIQETADGLSFDYGNVKDVA LFGKARYQCRNAALAIEVCLYLQRQGHIRLTEAQLRTGLHQAVWIGRFETISKEPLIILD GAHNADGIHALCETLKQMEDVQVLFSVLKDKNFEAMLQELETVCGEILVVPFYNERALDV RLLEGRKHIHLMESYERAIPYALQKAKPLVITGSLYFISDVRKYLIEKGYAG >gi|312956108|gb|AENW01000019.1| GENE 15 12764 - 13423 500 219 aa, chain - ## HITS:1 COG:lin0408 KEGG:ns NR:ns ## COG: lin0408 COG0692 # Protein_GI_number: 16799485 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Listeria innocua # 1 218 2 219 221 269 56.0 3e-72 MKQWKELFQQEEQKEYYRKLMQFLDEEYAHRTIYPPREDLFTCFTSCPFEAVKVVILGQD PYHQPDQAHGLCFSVRKGVQIPRSLKNIYKELKSDMNIDAPSHGCLTDWTKQGVFLMNTV MSVREGQAASHKKKGWETFTDTVISALNEQEKGIVFVLWGSHAQKKAELITGRQHRILMS AHPSPLSASRGFFGSRPFSTVNRYLEEMGRTPIDWRLSE >gi|312956108|gb|AENW01000019.1| GENE 16 13586 - 13819 89 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKGIPSDCLDSQMKFTNLEAQHKDNPDYPLVSRAIYYCSRLLSKQKNAQMDFSILIMIR LKKVFYLDLYPACWGKG >gi|312956108|gb|AENW01000019.1| GENE 17 14087 - 14635 405 182 aa, chain - ## HITS:1 COG:SSO2432 KEGG:ns NR:ns ## COG: SSO2432 COG2068 # Protein_GI_number: 15899180 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Sulfolobus solfataricus # 1 181 1 181 189 68 27.0 7e-12 MKTDLILLASGYSRRFQGNKLLYELDGMPLIAHTLQKLSTLNPHSLIVVTQYEEVEKLAR DYNAVVVFNTQARKGQSFSIRLGIERSTADQAMLCVADQPYLRLHTFKKLLELADGEHII CVTCQGILRNPAVFPRKYYKELLALSDEQGGKQILKKYREKVIAVPCDVDEVRDIDKRSD LK >gi|312956108|gb|AENW01000019.1| GENE 18 14625 - 16901 2460 758 aa, chain - ## HITS:1 COG:Z4220_2 KEGG:ns NR:ns ## COG: Z4220_2 COG1529 # Protein_GI_number: 15803418 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 EDL933 # 1 752 3 784 790 463 37.0 1e-130 MKYINQPVIKKDAYALLSGKPVYTDDLAPADCLVIKLLRSPHAHARIKSIDTGAAKRIPG VEAIFTYKDVPASRFTLAGQTYPEPSPYDRLILDEVVRYVGDEVAIIAAKNEASALQAMK LIRVEYEVYDAVLDFTKALDHPVIVHAEEDYKLLCEIGNERLRNLHSHDESIVGDVDQAF AECDVVLEREYHTKANAQAMMETFRSYAYMDTFDRLNVVSSTQVPFHIRRMVANALELPK SQIKVIKPRIGGGFGAKQTGCTEIFTAFVTWKLKKPCKLVYTREETFMASNSRHEMKMHV KIGAMKDGEIRAIDLYTLSNTGAYGEHGSTTVGLSGHKSLPIYNHVKASRFVSDVVYTNT MTAGAYRGYGATQGQFAVESAVNELADTLHIDPCELRLKNMVQEDEVMKQYYGEHLNSCA LDRCLRKAMDMIGWKEKALCRDMGDKVRGLGVALSMQGSGIANVDIASTVIKLQDDGFYT LSIGATDMGTGCDTILAQMAAECLDCDVDNIITQSVDTDASPYDTGSYASATTYVTGMAV VKTCEELKKQILHEAAVLLDVEEEHITFDGSMLRAVEDDKEITLAEFANRCFAGGKGACL IASASHCSPTSPPPFMAGIAEVDVDKLTGEITLVDYAAVVDCGTVINPNLARIQTEGGIA QGIGMALYEDITYSCKGRMRNNSFLQYKIPSRQDVGTIRVDFESSYEDNGPFGAKSIGEV VINTPAPAIASAVAHASGVQVRTLPITAEKVLLKKDED >gi|312956108|gb|AENW01000019.1| GENE 19 16898 - 17359 491 153 aa, chain - ## HITS:1 COG:SSO2433 KEGG:ns NR:ns ## COG: SSO2433 COG2080 # Protein_GI_number: 15899181 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Sulfolobus solfataricus # 1 143 13 157 171 117 41.0 7e-27 MNVTITVNGKRIQADVPAGQTLLQFLREQGYRSVKCGCETTNCGLCSVWMNEKTVLSCSV PVGRADGHRITTLEGVEKEAKEFADFMAKEGAEQCGFCSPGMMMQVLAMKKENRTWTDEE IKHWLAGNLCRCTGYMGQLRAIRAWLLKGGEAA >gi|312956108|gb|AENW01000019.1| GENE 20 17356 - 18129 942 257 aa, chain - ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 4 237 2 236 259 68 26.0 8e-12 MLTIQQYCKAKSLDEAYELLQKNRMNQIIAGMLWLRMQERTIPVAIDLCDLHLDMIEEDE DSFTIGAMTSLRALETHEGLQEAFGSLLTDALKDIVGVQFRNTATLGGSLYSRFGFSDVL CALLCLDAEVILHKQGRISLQEYAAMPYERDILTHVVLKKEPVNTAFACVRRSATDLPVL NMSAAKAGESLRIVAGSRPKRAQRFTMPWSEDQEMIAKHMQTCVECEDNMRGSAEYRSAL IYALTLRLLKQLKEDAA >gi|312956108|gb|AENW01000019.1| GENE 21 18086 - 18904 912 272 aa, chain - ## HITS:1 COG:ECs1697 KEGG:ns NR:ns ## COG: ECs1697 COG1120 # Protein_GI_number: 15830951 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 207 3 210 252 133 34.0 5e-31 MISIQHLSVQLQGRDILKDISFAIPKGRIVMLLGENGSGKTTLIRSLLQYIPYKGCILHE KSDIHSLKQRQLAALFSYVPQIKETVEDLAVEECIVSGFARTLSPFALPSKKQYEQVHAL LKDWNLSHIEGKLLQEISGGELQMTYVARAFLQDAALMVMDEPCTYLDYRRQHQFLQEML RLKLQGRSMLISMHDPNLALQYADELVLLHQGKLYAHIRGPRPEMTAACCTYYNELYGDT FTVIGTKSEPTLIWKENNYADDSAILQGKEPR >gi|312956108|gb|AENW01000019.1| GENE 22 18901 - 19869 963 322 aa, chain - ## HITS:1 COG:PM1308 KEGG:ns NR:ns ## COG: PM1308 COG0609 # Protein_GI_number: 15603173 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 4 321 6 330 330 184 38.0 2e-46 MRRRFWLGLLLAVLALGSLCAGRYGSSLSDIARALLFSGDELTQSLVWNLRMPRILLVSI SGAALAVSGVVYQTIFRNPLASGDVIGASSGCSLGAVFAILFYQESWFIELCAFLTGMLL VILTFLLASRVRGNRILNLVVAGLILQAVATSLMMMMKLYADPATQLANMEYWLMGGFSD ASWSAVLLTLVLCTLGMSGLYLLRWQIQLLSFGEEASTLGVNVKLIRWVSLLLATLLISS VISVAGIVSWVSLLIPHIIRIACRKPISQTMGITAVSGAIFLLLCDTLARTLMTIEIPIS ILTSLFGALALVVLFVKGRLRL >gi|312956108|gb|AENW01000019.1| GENE 23 19871 - 20875 1208 334 aa, chain - ## HITS:1 COG:CAC1988 KEGG:ns NR:ns ## COG: CAC1988 COG0614 # Protein_GI_number: 15895258 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Clostridium acetobutylicum # 1 322 5 334 355 108 26.0 1e-23 MKRFLMTAMSAIMALSLMACTDTGKEDEKKVSEGFIITDQAGRKVNFDKPAEKAISGYYI ATSTVIGLGQKDKLVGVEMKADQREIYKQAAPEILELPAMGNKKSFNVEAAIKTRADVAF LPIALKSYVGKLEDAGMKVILLNPETQTEYDEAVNLIAIALGAREEAQNYFNYRDVLMEK YITDTGVAKKVYMSGSSLLEGAGSDMFQNSLLKSAKAENVMAKAGKGWSTIGKETLLDMN PDVIFLENGGADVKSVLQDSALSSLNAVKKKQVYEFPSPLETWDTPNLSSCLGALWAYAT LYPDNLSMDTVKQEAKDFYRTFYHIEVKDSDLGL >gi|312956108|gb|AENW01000019.1| GENE 24 20879 - 21382 625 167 aa, chain - ## HITS:1 COG:no KEGG:CLH_0592 NR:ns ## KEGG: CLH_0592 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 3 158 5 165 184 78 29.0 9e-14 MKIFLTGQKQIGKSTCIQECIRECHKSVCGFLTLPFYEEQRRAGFYLHALHAMEHNDQRF SMQHETWNEVIPGVFNSFGTQLLQQACRLQEHILILDEIGHLEQKETIFLQTLLDSIDKF PNILGVLKKYDIQYIHEIAARKDVIVFDLDVMAYEDVKKYILKAMGG >gi|312956108|gb|AENW01000019.1| GENE 25 21384 - 22694 464 436 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 11 436 6 426 447 183 30 5e-45 MEEKKKDSIYELDGTVPLKKALPLGIQHILAMFLGNVSPLIIVCGMLEMSGVLKMTLIQN AMFVAGIATLFQLYPFWKIGSGLPIVMGTSSGFIGTAKAIGAAFGYGALMGASFIGGIFE MVMGYFIKPLRKLFPPVVTSLVIISIGLSLLPVGINYFGGGNGAADFGSTNHLLVGTFVI IVILIAKQFKGAINNASILIGIVAGYILATILGMVDFTQVSSASWFALPAFMPVAFEFNS QAIIAMGIMFIATTVETIGDVSGVANGGLNREATDKELQGGVMADGLGSILGAIFGVLPN TSFSQNVGLVAVTKVVNRFVIMTGAVFLILCGFCPKLSALFSVMPQSVLGGAAVIMFAMI LVSGIQSLTREPLDERNGLIVALAIGLGVGIGNVPAVLAQLPSWVGNIFAQNGIIMTFVI ATVLNLILPKKKSEEE >gi|312956108|gb|AENW01000019.1| GENE 26 22868 - 23071 117 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGIHYMDKYPLISNGLYSTIARIGVSIVSCCIQEKESLQVVISDILYGVITLFLKLTGK VFIYVEK >gi|312956108|gb|AENW01000019.1| GENE 27 23164 - 24681 1570 505 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0908 NR:ns ## KEGG: Sterm_0908 # Name: not_defined # Def: protein of unknown function DUF1538 # Organism: S.termitidis # Pathway: not_defined # 3 500 4 500 507 511 59.0 1e-143 MTKLKNKIKEAVSSVLPITCIVFLLSITITPMPVGTMLLFACGAVMLIIGMGLFSLGADM SMMLMGEGIGTMLSTSKKRCLMVCITFVIGFIITIAEPDLTVLAHQVPGIPDNTLIWTVA AGVGFFLVMALLRILFHWNLKYLLMLFYALVFMLAYFSMDTFMAVAFDSGGVTTGPITVP FLMALGIGMANVTQKHAEEESFGIVALCSIGPILAVLLLGILYEPQGATYTPFEMAYVET SKDVIRIFLTELPHYMWEVSKALLPILCFFLLFQLISSYFNKRAIIKILVGALYTFLGLI LFLCGVNVGFMPAGYFIGTQIAALSYNWILIPIGVLIGFFIVKAEPAVHVLTRQVEDISS GTISTKAMLYSLSIGVGISLGIAMLRILSCISIMVFLIPGYLTAIILSFFVPNVFTGIAF DSGGVASGPMTATFLLPFAMGACEQLGGNVLLDAFGIVAMVAMTPLLTIQILGLVMTKHK KTAAGELQEDSIMEFEEVINERTEN >gi|312956108|gb|AENW01000019.1| GENE 28 24662 - 25324 750 220 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0909 NR:ns ## KEGG: Sterm_0909 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 5 220 19 239 240 126 34.0 7e-28 MSGQKIKCLVIIVNRDKGEQVAELCRSYQLYFTYGILALGTAGSDLLDYLGIGETDKELL FCCLPAQLEHEVMHRIAKETQIRKMGHGIMFTMPLSGISSLFQRKILCGRIYEEEEMEQK ERKYELVIAVVEHGWRDQVMEAAKEANATGGTVLHARSLHEDDATSFLGIRLQGEKDIVV ILSVYENYKQIMHEINMAAGLQTEAKGLIFSMPVDEFIGM >gi|312956108|gb|AENW01000019.1| GENE 29 25499 - 26560 1213 353 aa, chain - ## HITS:1 COG:MA0533 KEGG:ns NR:ns ## COG: MA0533 COG3212 # Protein_GI_number: 20089422 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 197 353 49 205 206 88 37.0 2e-17 MKKIQQLSTSVKALLAIGGISVLAGGGVIITNAMEADSRIDADKAKEIALQDAGVKATAA QFEKAALEKDDGQSVYEVKFHTDEHAYEYTITAKDGHILDRDVDTWKQGPAADTSPISLQ DAKNRMLKNAGLKERDGTFLKASLNKEDAQEIYELKFKTAQKTYEYKLLAKDGTILEKDM ETNAASGSEPENNKGNSTASQQLISKADARSRALQDAGVSAKAATFTKTKLDYENGRQVY EIEFVTATMEYDYELDAESGAVRERKSERLEIQNQEQSKPSASYIGVDRAKSTALSHAGL QAGSVTFTKAKLENDDGMSVYEIEFRKGSTEYEYSIDAYKGTILEWDKETDHD >gi|312956108|gb|AENW01000019.1| GENE 30 26637 - 28043 1515 468 aa, chain - ## HITS:1 COG:FN0586 KEGG:ns NR:ns ## COG: FN0586 COG0642 # Protein_GI_number: 19703921 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 1 467 10 445 445 222 30.0 1e-57 MKRLSIRAKITLWFALAMSVLAALTLGCVWMISDNVVQKNIKDSLVEMVSDNVDEVEYYR NKEDANPDGDRDIYIQYKNGYLEIDDDYLDQMNGIYTTLYKEDYELLYGENPIAEASGDI AFADNKLQTLRYKGTTYYLYDRSLKGEGMEDLWLRGIVSRSQGARWMDAIVILSMWLIPI LILLALAGGYFLAGRFLRPIQQMIQAASGIQQGQDLKKRIELNKGQDELHQLADTFNGMM DRLEASFQAEKQVTRDMSHELRTPVTVILSQCELSLEEEQDKSTYADALRLIQRQGQKMS VLINDMLMMTRMEQKRDSICMVQLDFSSLCASVCEDLRLIREKNIALSWQLEEHVMVMGN RELLQRLLANLIANAYRYGKEHGHIQVDLKQEHAEVLLSVTDDGRGIAKDQLAHIWQRFY QADASRSNQGSGLGLAMVQEIAQLHHGYMKVESVQGKGSCFTFCVPMK >gi|312956108|gb|AENW01000019.1| GENE 31 28040 - 28768 780 242 aa, chain - ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 19 240 1 222 224 231 51.0 1e-60 MLLSYLYDTMEAKEGDAGMRLLFAEDERDLNEIVCQKLRKEGYTVDACFDGAEALEFLAV ADYDAVILDIMMPVMDGYAVLKQLRAEGRMTPVLFLSARDSIEDRVLGLDSGANDYLIKP FSFAELMARIRTMIRLSKGSQTSLLQVGDLTLDTATHTVHRANKLILLSAKEYALLEYML LNKNIVLSRETIEEHIWDFDYAGGTNLVDVYISYLRKKIDGASTCKLIHTVRGSGYVIKE PS >gi|312956108|gb|AENW01000019.1| GENE 32 28970 - 29659 909 229 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399927|ref|ZP_06644073.1| ## NR: gi|293399927|ref|ZP_06644073.1| hypothetical protein HMPREF0863_00210 [Erysipelotrichaceae bacterium 5_2_54FAA] # 5 223 1 217 223 132 34.0 1e-29 MSENMKFKRKVLSRKKIISSFLVVLVLSLCLGGFMYGLADSFEDFADIRILQIGFLVLFP LFTVIMWVPLCLGGGQIYDMREDALVIIPAYKDRQKWNMILHVLCSDDVTPFLQEIRYED IDHATFTVDRKAGVWGLSRYTYLLKLYKEKDLFVTLYINPMDNGILLPAGKGGILLTGFR TSEDILNMMQLITAGGMRLEDPHHILDAMKQRDIEIYDYLESLQIKRRY >gi|312956108|gb|AENW01000019.1| GENE 33 29717 - 30946 1018 409 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_00456 NR:ns ## KEGG: EUBELI_00456 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 192 400 179 393 393 75 23.0 5e-12 MSLFLRVFEILMMCTLCYSYHETMRSQYRSSLAKILPYLITGFFLILISPWLSITILRIL LAVLLCLSILLYRNDWRSHLFFIGSLIAGAIIVQIISTQNPAFHAEPADWLQGCLYCGVV FLIQLLLFYYRHVQYEQLYVPVFAGAAFLYLIICAYIGSQGIHVDTGIICSLQVLVILVM KLYRICFCLEIRREKELQAMVKTQHMVENRERYERIQKENAYIMKSMHDLKKHVELLEQM KQGNPAVDDYRSDIIVKTEHMLNVQKTGDELIDKILQLYHPRFQVAGIRFQLESDVIDYS FMDPIDRCAVLCNMLDNALESCLAAEEPFILLRMVEQHSTILWKMKNSCIRMEQEKEDAF AHGFGMQNIRDIARRYQGTLSAGWERTHLLFRTTVAFDKPLMSENEPLM >gi|312956108|gb|AENW01000019.1| GENE 34 30943 - 31650 813 235 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 220 1 219 234 89 26.0 6e-18 MYHIAILDDERKEAEHIKELADVYFDRKELMQRRIDIFHNGNELLAHVKAIPCDLLFLDI EVGQENGIEIGRKLRQIAPDMIIVVITGYLKYSVEGYKIQAARYLLKPVNAQLLYSELDE VLSLDDRQTLVLEERDTYHRIKRRDILYVETMGRGTRFHTPEGTFESRESLSIWEQRLDA ALFVECHKGILVHVRRIVSMEKDTILLETGETLPLARRRVETVKAVWRSFQEKYA >gi|312956108|gb|AENW01000019.1| GENE 35 31931 - 32350 190 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257468155|ref|ZP_05632251.1| ## NR: gi|257468155|ref|ZP_05632251.1| hypothetical protein FulcA4_02387 [Fusobacterium ulcerans ATCC 49185] # 2 131 34 162 166 110 50.0 4e-23 MRPFIGILMTHDDIEYVIPLTSPKDKHKNMKNTMDFHKINGGKWGAINFNHMFPVLHDPS VYKIIRPLKDVNTYSNLLINQISWLNKTENKEMVLKKAEKLYEAYVNDTLQDKIKKRCYD FKKLEKHYKEYITQTLSQK >gi|312956108|gb|AENW01000019.1| GENE 36 32812 - 33735 1003 307 aa, chain - ## HITS:1 COG:SA0301 KEGG:ns NR:ns ## COG: SA0301 COG2313 # Protein_GI_number: 15926014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Staphylococcus aureus N315 # 1 305 4 305 307 351 62.0 9e-97 MGKYIDYLDIQEEVKAALEEHRGVVALESTIISHGMPYPQNVEMAKNCERIIRKAGAVPA TIAIIDGRIKIGLSQEDLQRLASADTVMKVSRRDLAVAVAERRMGATTVATTMMCAAMAG IQFFVTGGVGGVHRGYEETMDVSADLEELAQSDVTVICAGAKSILDIPRTLEYLETKGVT VIGYQSDTLPEFFTREGSCRLQQRMDTVEEIAHMLHVKKDLGIKGGVLVANPIPEAYSMD AAYINAMIEKALECAKAQNIKGKDTTPYLLAHIVKATQGKSLAANIQLVYHNAEVGAALA NAYAKKE >gi|312956108|gb|AENW01000019.1| GENE 37 33728 - 34690 803 320 aa, chain - ## HITS:1 COG:PAB2402 KEGG:ns NR:ns ## COG: PAB2402 COG1184 # Protein_GI_number: 14520411 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Pyrococcus abyssi # 14 308 12 310 324 160 31.0 4e-39 MRVKDIQFKNAEHVIEEIKSMNVKGGSPFGRAAAWAFRLACEQEEFQDTGQLQKRMEHIA QQMLDLKPTMATIFNTWQLVKQTMLKEKQDVYRQKQAVISLCSNIIAYSFEAVEQLGVYG ASLIQDEEVIMMHSYSSTLMGIFLKAAEMGRKFTVICTESRPLRESRLAVNMLRSAGVSV IYITDASIYEFLPRADMVIMGADTLCADGSVANKMGTAMIAGLAKACKKKVYIASELYKL DLRTQVGYRVVLERRSAWEILNKDDFDSLDGIDVVNQFFDITPASDIQAIICEYGIIPPA SVLNFWKDLENHVKGDGNNG >gi|312956108|gb|AENW01000019.1| GENE 38 34705 - 36090 1460 461 aa, chain - ## HITS:1 COG:BH0595_2 KEGG:ns NR:ns ## COG: BH0595_2 COG1263 # Protein_GI_number: 15613158 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 98 456 4 379 399 219 37.0 1e-56 MAIQKQKLAADILEYVGGVDNVCDVAHCMTRLRIVVKDEKAVQMKQLEKLEGVMKVVILG GQYQIVLGGIVDDIFDEVAAVCGDRVNINEEMIAENLDAETKKGRRSLLGMLVETISAIV TPIIPAMLACGFIKTLAVLFTVVFKVDEANSTIQVLNVVSDTLYAFFPVIIGWSAAKKFK TNMAVSLVIVALLVNPAFTGLFADGASVTFLGIPVTDVYYGSSVLPAILSIYLLSRVEML LRKIIPGALRSIFVPFLSTLTVFPLLILAIGPIGVWGGNLFASLFTSMYDFSPILAGALI GGTWQILIIFGMHIAILGLVSVPNIAAYGRDTVIMTHAPSLICQVAAGLAVGLKAKNPEI KKNAITLSLTSFFAGSVVEPVMYGINLKYKRPFIAVCIGGAIGGAITGASLAGTTAAVAF SLYTIPAYLGAGFTGLLIGCGVGACVTFILTWIMGFDEKAI >gi|312956108|gb|AENW01000019.1| GENE 39 36114 - 36971 1031 285 aa, chain - ## HITS:1 COG:CAC1406 KEGG:ns NR:ns ## COG: CAC1406 COG3711 # Protein_GI_number: 15894685 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Clostridium acetobutylicum # 4 277 2 270 277 152 34.0 8e-37 MSYTFVRVINNNAIVGADRKGEEVILLGKGIGVRCIKHRRYIVASSLIEKVFVVEKKANE RYVEELIKSIPFPYIDTVNKVVALAERLLNYNFKDQLFLTLLDHISFSVRRLQAHEDIQN PLLQEIRQFYPKEYDAAQQAVELINHELHVHFDENEAAFIAFHLINAMSSYGHSLNKKMT IIMSELTDIIQDTFQIELDEQSIYYTRFITHLKYFLGRVLNDRHENSFLREEQNMHELVK EKYQSEWECALHIREHLKQKYRVDTSDEELGYLTMHIVPMLTKRK >gi|312956108|gb|AENW01000019.1| GENE 40 36968 - 37492 278 174 aa, chain - ## HITS:1 COG:lin0026_3 KEGG:ns NR:ns ## COG: lin0026_3 COG2190 # Protein_GI_number: 16799105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Listeria innocua # 22 145 5 128 151 105 41.0 3e-23 MEEIMRLLRKRKSCNSTADIYIASPCDGEVLPLQESKDPMFRDAVLGQGCFVYPKDDCIY APVNGVVEAVFPTRHAIGIRSQSGLQLLLHFGINTVQLNGLYMKTHVRKGDVITEGKLLA EMNIAGVIKAGYDPDVYVIILESEHKKVTVFEREVYHGETLMEVRDTTERMQIE >gi|312956108|gb|AENW01000019.1| GENE 41 37891 - 38745 869 284 aa, chain - ## HITS:1 COG:BS_ybbH KEGG:ns NR:ns ## COG: BS_ybbH COG1737 # Protein_GI_number: 16077237 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 4 271 16 274 283 112 26.0 9e-25 MPFLSAKEKKLGNYVLTHSQEILSLTLKDLSLQAEVSEATVIRFARKLGCEGYSDFKLSL SANLSANFYNENSDMILDKIMPTDTPDSVLKKLSAFIVTSIQSTTDIIDSQELDKAIKLI RDTNEHKRKIYLSGLGASSTLVKQLQIKFMRLNIPVIYYEDVHLQLESNLNMAEDDLLIC FTTLGKSVQSHQYINIANQKKAKIILITQYGNQELASKATVTLFVSAVENNLRLASHTAL IVQSLIVDTLFLSLALDNLPEIQEGVAEKNRIFSELGYNMNDYK >gi|312956108|gb|AENW01000019.1| GENE 42 38989 - 39639 715 216 aa, chain - ## HITS:1 COG:VCA0102 KEGG:ns NR:ns ## COG: VCA0102 COG0637 # Protein_GI_number: 15600873 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 4 211 8 215 219 120 35.0 1e-27 MRAGAIFDMDGLLFDTELVYNQEWYYIAELYGLKVDPAMLDELRGTNGTRMSEIVNTYWP RVDAKKLTDELFAHAIVTLSKQVPMKPGVVELLEYLKQHAVRMAVASSAPMELIKSNLRL AGIADYFDAVVSGEQVEHGKPFPDIFLLAAQKLNLQAQDCYVFEDGINGVRAGIQAGCST IMVPDLVPPTKELYEQCTGIYPSLHAVLHALQTYTC >gi|312956108|gb|AENW01000019.1| GENE 43 39655 - 40056 265 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915483|ref|ZP_02077694.1| ## NR: gi|160915483|ref|ZP_02077694.1| hypothetical protein EUBDOL_01491 [Eubacterium dolichum DSM 3991] # 1 127 1 127 134 106 40.0 5e-22 MKEEEIRDILNSHQICFAQHGTLCATVKAGIGAYQNGLGEIMHTMKDHILHINAQGIAIL AVDDINGAPQEHTLLFLPHEDIVSTTIKIKLLHFLFTIETRKGTIVYKLHKNVLASPWHK ENLSFLLLNSPSA >gi|312956108|gb|AENW01000019.1| GENE 44 40076 - 40489 457 137 aa, chain - ## HITS:1 COG:SP0064 KEGG:ns NR:ns ## COG: SP0064 COG2893 # Protein_GI_number: 15900009 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 2 131 3 125 134 72 34.0 3e-13 MKGILLASHGRLAEGLLDTLQIFCGELQQMQALCLLPGEEITEFMEKLEAAIQKVDTGEG VVIFCDLLFGSPCNCSARLLQDAKYAEKISVITGMNLCMVLEYIGSGAAGMDREALVDTG HKGIVDFNKLLRERQAA >gi|312956108|gb|AENW01000019.1| GENE 45 40595 - 41416 1131 273 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 9 273 16 278 278 159 38.0 6e-39 MAEERKTSLTKRDVNRVIARWYITTEMSLNYERMQSIAYTYALIPALKKLYPNKEDMIPA LQRHLELFNTNATAGGLILGTTLAMEEEKANNPDAIPSESIVAVKTGLMGPVAALGDSFS AGTITTLFILASCSLAQGGSIAGFWLLLLGTMYTLGELIIFTKMTYTKGRSAIKDIMSSK LMSNIIEGANILGMAMMGALTASMVNLAVAITANFDEATLSVQEKIDGIMPGILSIGVLF IYYYLISKKHVSVAKLVFFTIVIALLCAAIGLF >gi|312956108|gb|AENW01000019.1| GENE 46 41420 - 42184 867 254 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 7 242 4 239 249 162 38.0 5e-40 MSGTQLVIMAVAMGLMYWIARGMIGGYFAFFFIASPIVVGVVAGLIYGDLTKGLIIGGGI AAAFAGIIAPGGNLPTDSALAATTVIPIALATGLTAEQAIAFAVPMGLLGSFVTNLRKMI NVIFVHRADEFAAKGNLSGITRCAVVYPPLIEIPLLFLPVFLIVMFGQDAMLTFMNSVPS WVMHGLEVAGGVMPAIGFALIMNMIGKPKMIPYTVLGFIVVKAVGLNTLTAGLVAGCVAV LVVLEKREREKEGA >gi|312956108|gb|AENW01000019.1| GENE 47 42207 - 42683 611 158 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 157 1 161 161 90 32.0 1e-18 MGKLNMVRVDYRMVHGQIVAKWIKFRPVDRLILADDSLVDDPFMGDIYRMAVPDREVDIV KLGDVQTAIDRKNDTVLLIFKDVASAYTVYKNGLQLPELNVGAVQNSAQRKAVVQGVALT VEEYEKLSEMKAEGVNVFLQPIPENDPVSLGSIEKKLK >gi|312956108|gb|AENW01000019.1| GENE 48 42719 - 43741 1197 340 aa, chain - ## HITS:1 COG:STM2753 KEGG:ns NR:ns ## COG: STM2753 COG0673 # Protein_GI_number: 16766065 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 331 1 331 337 338 48.0 1e-92 MKKLNIAVVGAGIYGKNHLDAYTSNPNVNLVAVCDLKKEITDKVEQDYQVKTYNDMEEML KSEEIDAVSVATPDPYHKDPVMTAIRYGKDVLVEKPLATTSADAYDIIEAAEKAGVRVMV DYHKRWDPASIAVKNKLADAGTGKPVRGYMRMDNVYDVAINWLNWSSDSSPVHFVGTHCY DLIRWYMGCEVVQVYAVGHKGILQEKGVDTYDSITAILEFENGCTWTVENAWILPNGFAK ADDGCSEILCEHAMIRVDSQKRGVEFFDDQKQYTPNICFIQNHNGRAIGFGIDPLNDFVD CILHDKPFVANLNDGLEAELIAEAVHKSADTRQVVKIERR >gi|312956108|gb|AENW01000019.1| GENE 49 44174 - 46264 1876 696 aa, chain - ## HITS:1 COG:lin2832 KEGG:ns NR:ns ## COG: lin2832 COG1455 # Protein_GI_number: 16801892 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 14 404 25 419 435 182 30.0 2e-45 MKKGYRKFFDSIFILSIKRGLMLAIPFLILGSFALLLSSFPLDAYQSFLTSFHHGALLTV FNSLYEITLNSLALILIITIALSYGQLHALDDVFFYPVVAMVSYLAFCGGMEYANEIFHP EWVFTAMCITMLSCWLFHKGMHCGRRFEKLHTAGAGYTFNKAIQGIFPIAAIALFFAVIG AVLRAQFGEVNITNFGAYLFMGLFEKVGKGLPGALLYVFFAHFLWFFGIHGTNTLQMVAK QFLEPGILINQQLVQAGQLPTEIFTKTFLDTFVFMGGCGAALCLISAMLLKARKSNNRKL AKVAGISVLFNINEIVIFGFPVIFNPLMLLPFLLVPLVLTLTSAFAMQLQLVPLPTHFVE WTVPILMSGYEACGSVSGSLLQLFNLILGTLLYIPFIRLSENQQSEEFETAVRTMETDMA EGEANGALPDFLDDHYLYHFPAKTLAMDLKNAMQRNQIHMHYQIQRDNAEHIHGAEALLR WEHPVAGRISSPLMVKLAEEESFLDELGLYIIKEACKDAQKLQKEGTPLSISVNISPKQL ESAVFVREVRRILQEVDLHDIQLILEVTERSLLSTSGRILERIRELKQLGIQMSMDDFGM GHSSMMYLQENAFDEVKLDGSLVRQILENERSRDIVRGITRLAASMQFHVVAEFVETREQ MELLKALHCDIYQGYYYGKPCSCDEFIIKYLKQEPR >gi|312956108|gb|AENW01000019.1| GENE 50 46514 - 47353 669 279 aa, chain - ## HITS:1 COG:all3171 KEGG:ns NR:ns ## COG: all3171 COG2207 # Protein_GI_number: 17230663 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Nostoc sp. PCC 7120 # 123 276 161 304 306 79 32.0 5e-15 MFSNGKNHILREETIHLTEFAQVHMQMVKHVAHFTCIEAHILHFHKHDDRQYLVLYLPQG TGILVKGSDYTALTGSCTLIQSYASVFSIYLDEGCEVYAALLTGESIQGYIKQETILQDL RFHKKTEIFFHSVFQSLDKYHLVDEYSISSSVLRLYSDLHYQLHEAQPGSMKQEMVDKAV SFIEQNYRRDIGLKDISEAGGYSEYYFLRVFKEVMRMTPYEYLIRKRLSQVKILLLSTGK TIEEIALECGFKSDISLYKAFKNMYSITPGEYKKCVGRG >gi|312956108|gb|AENW01000019.1| GENE 51 47410 - 48870 949 486 aa, chain - ## HITS:1 COG:AF0691 KEGG:ns NR:ns ## COG: AF0691 COG3894 # Protein_GI_number: 11498299 # Func_class: R General function prediction only # Function: Uncharacterized metal-binding protein # Organism: Archaeoglobus fulgidus # 39 476 106 564 585 178 29.0 2e-44 MTKFQKHDDILELLLQKHPQLDLSCGGRGQCGKCRLQVTKGFLPVTDAEGKLLSKVQLAQ GIRLACEHRNCEAAIEGELLHEQRDMQIVGVEELHLAGHHEEGCVLAVDIGTTTVVLVLL DLQTGNVLLEKSFLNPQRRYGSDVISRIQHAHEKGPTLLQELLLKGLRAQLKAVENKDIR RMCVCGNAVMTHLFLGIDPIPLAAAPYECVQKELVICSSKQFFPDFIPEFEIQVLPPISA YVGSDILMGIYAQDMEKTKQSSLLLDLGTNGELALYHEGMLSVSSAACGPAFEGGNMSCG CGAVTGAVSEVRWENGFRLQTIHDGKPVGICGSGYLSLISCLLTASLLDVSGYLNQQVTL FDGLLLTQKDVREFQLAKAAIAAALERVCAGAQCSYEQIEAVYLAGGFGRHLHVEDLCIT GILPTALKQAVRISGNTALKGCCRYALEQNRTRMELLCKNGHCILLASDTGFSDAFISHM LLEPFT >gi|312956108|gb|AENW01000019.1| GENE 52 48867 - 49502 867 211 aa, chain - ## HITS:1 COG:mlr1231 KEGG:ns NR:ns ## COG: mlr1231 COG5012 # Protein_GI_number: 13471298 # Func_class: R General function prediction only # Function: Predicted cobalamin binding protein # Organism: Mesorhizobium loti # 15 199 33 217 238 160 42.0 1e-39 MSDKLEKIQQLMPLGKMQEVNALVESALQEGISPQEILKGGLLEGMDIVAKKWAEGTAFI PEVLISARCMNGAMEILEPYLVKKEEKFSGRVVFGTVQGDLHDIGKNLCTLMLKAKSFEV IDIGVDVCAEKFVEAVKTYQPDVLCMSSLLTTSMGYFKVVLDALQEAGVRDCVKVAIGGA PVTQAYADEIGADLFTEDAVSLAGRLLEEFA >gi|312956108|gb|AENW01000019.1| GENE 53 49495 - 50583 1113 362 aa, chain - ## HITS:1 COG:no KEGG:Caka_0351 NR:ns ## KEGG: Caka_0351 # Name: not_defined # Def: uroporphyrinogen-III decarboxylase-like protein # Organism: C.akajimensis # Pathway: Porphyrin and chlorophyll metabolism [PATH:caa00860]; Biosynthesis of secondary metabolites [PATH:caa01110] # 139 348 127 332 340 127 32.0 6e-28 MVCDRRKFPKAEMLPLTREEMISLLKGNGTPRVGVACGNWLHIDELALQDQKPVEDLLER FPEDMQVFYLKKPKLFAEDGDRYTWCDVAGADPSIGRKEIVGVDEEHALDWEVIRRISEH LPDAEEATMYCNAPVEDGRYRLAWFSDGPWTRLWDYRGMTNSLMDLYTNPEDVHHVCRRV VDFFKRAAKRGVEEAHIDGIAFGDDLGMQKGPFMSPEMFREFYYPYYVELCEYAHSLGLH VWLHSCGDVRKLLPDIIKSGIDVLHPIQKYAMEEQEIADTFGNQISFWAGIDLQRVLPFG SVEEVREETRHFIDVFHQRGKGRMVFTLNNRMQGNVPIENFIAFIEEAHRYGAAIEGVKE NE >gi|312956108|gb|AENW01000019.1| GENE 54 50573 - 51601 762 342 aa, chain - ## HITS:1 COG:MA4355 KEGG:ns NR:ns ## COG: MA4355 COG0407 # Protein_GI_number: 20093142 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Methanosarcina acetivorans str.C2A # 68 323 77 360 370 82 25.0 1e-15 MNYSYTQWKKHLMDEDVHAMAILSFPAVTQCATTVQELVQNAEMQSAVMRRIKEEFPLQE ALVSMMDLSVEAQAFGCPVSFHEGEIPAVTSGIIKNREDGEALRIPKMEEGRMSVYLAGV ENITKESDRPVFGGVCGPYSLAGRLMDVSEIMMQCIMDPKLVHLVLQKVTTFLKQYIQAY KDVGASGVILAEPLAGLLSPAMVQEFSSSYIREITEELQDDTFTVIYHNCGPNTVQSLPE ILSSDCGAWHFGNAVSLKKILEQVPADCLIMGNLDPVGCFCGCSADELEQKERALLKECG AYSNFVLSTGCDLPPKAKWENIQRFFRTLEQVNSERRLPYGM >gi|312956108|gb|AENW01000019.1| GENE 55 51934 - 53184 656 416 aa, chain + ## HITS:1 COG:MA2121 KEGG:ns NR:ns ## COG: MA2121 COG2865 # Protein_GI_number: 20090964 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 3 336 15 355 458 117 26.0 5e-26 MKESKTLEFKESITKSFLKTVSAFSNYDGGEIIFGIDNDGNIKGLSDPKSTCLDIENRIN DNIVPQPGYSLKTDETNKTISLVIKEGKNKPYLYNSKAYKRNDTSTIEVDSFELTRLVLE GKKINFEDLPSSNQKMDFHYLENKLKEHIDIKIFNQDTLKTLNLYNVQIGYNNAANILSD NNSFPGIDIAKFGDSINIIKKRLLLENMSVLEMYDVAVQTYRDYYQYEEIEGSYRKKVDL VPEEAFRESVANALIHRAWDLNANIRISMYDDRIEITSPGGLINGITKDEYITGMILMLR NPIISNIFYRLGIVEIFGTGILRILHAYEESIKKPIFNVSTNTIQIILPVFDSNPVLQKD EEHLYAVLSKTKPKSISEILPHVTFSRSKVKELLKKMEKDGIVKIKGRGKGTKYYL >gi|312956108|gb|AENW01000019.1| GENE 56 53475 - 54920 1655 481 aa, chain - ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 8 481 7 481 483 575 57.0 1e-164 MKQVPETFPDNFLWGGAFAACQCEGEYDKDGRGLSTSDIHEYTKGLNRAKIEKEGGGTLA EIKRKAADTEGYYPKRYGINFYHTYKDDLALLKEMGFKCFRTSISWSRIFPNGDEAEPNE AGLKFYDDLIDEIIKDGMEPIITMSHYDIPLHLVTEYGGFGNRKVIDFFVNYGKVLVERF QGRVKYWIVCNQVNLVPTVQFGSLGIYDDQAENMEELMYQAVHNQFVACAKIKEVGHQID PHAVFGTMLADCTFYPATCRPKDVVLTMKKNRMQYFFSDVQLRGEYPVYALRYFKERNIN IQMEDGDEEVIRNNTMEFLAISYYYSRVVDSDKNDMTPMQAEQNPNLEPTPWEWRMDPLG FYNCLSQYWDRYQIPLMIGENGFGALDTVEADGSIHDPYRIDFLKKHIEQMKECIKDGVY IFAYCAWGPIDIVSSSSAEMSKRYGFVYVDRDDFGKGSQKRLKKDSFYWYAHLIETNGSE L >gi|312956108|gb|AENW01000019.1| GENE 57 54917 - 55573 496 218 aa, chain - ## HITS:1 COG:no KEGG:CPE1169 NR:ns ## KEGG: CPE1169 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 24 193 16 194 214 73 31.0 6e-12 MKKNRRETGHQSSFFYRCSLCAAGGMLMGVAAVLFLAGGNGADSMNTLLQGMSQALQLSV DACNNLLSFTFVLAAFFIDRKQIHAGTIIFPVVTTITIRILTPLVHADTLLHRVLFCMAG IGIIAMSIALSIYADCGKNPYDCVTFGLMKRTGLSYPVIRWILDGGMLVSGMILHGTYGV VTIINLLVLGRLITAALSLLKRLKWLRRTMNIEEEILL >gi|312956108|gb|AENW01000019.1| GENE 58 55706 - 57145 2016 479 aa, chain - ## HITS:1 COG:L179659 KEGG:ns NR:ns ## COG: L179659 COG2723 # Protein_GI_number: 15672157 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 3 479 7 478 478 449 48.0 1e-126 MSKGFPNNFLWGAATSAYQVEGAAYEDGKKASQQDIINKENYTKRGFATADIASDQYHHY KEDVALMKEMGFTTYRFSIAWSRVFPDGVGEVNEAGIQYYRNLIDELLANGIEPIVTLYH YDLPWALVEKYNGWLSREVVKDFAYFARYVINEFKDKVKYWTTINEQSIIVQYWTQKCYI PEELRDNNQLRYQINHHMNLAHAIACKLVHELVSGGLAGAAIGYSPVYPLTSKPEDVMAA QNAHDLRNAFYLDIYFKGFYTKSAMIYLEEHGLAPVIEEGDMELIKEGYSDFLALNYYAS ECAKACPMEEGKEIRYSGVNWSGKKGDMSGFETHPGFYEMCKNPNLDTTDWDWAIDPTGL EYIFRDIYTRYNKPLMVTENGMGAFDTLTEDGRVHDDYRIKYLRDHIEAMHRAIDYGVEV LAYCPWSAVDLLSTSNGVKKRYGFIYVDRTDDDPKECARIRKDSFYWYKQVIKSNGADL >gi|312956108|gb|AENW01000019.1| GENE 59 57157 - 57495 570 112 aa, chain - ## HITS:1 COG:BH0910 KEGG:ns NR:ns ## COG: BH0910 COG1447 # Protein_GI_number: 15613473 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Bacillus halodurans # 1 110 1 110 110 67 39.0 8e-12 MDIMENELVNVAMQIILHAGDARLRVEDALAQAKQFHFDEAKQKIAEAEECIHQAHVAQT EVIQNETRGKTYEPCLLFAHAQDTLMTIMSELNLAKELIAFFEIMNKKIEEK >gi|312956108|gb|AENW01000019.1| GENE 60 57510 - 58763 1491 417 aa, chain - ## HITS:1 COG:lin2459 KEGG:ns NR:ns ## COG: lin2459 COG1455 # Protein_GI_number: 16801521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 408 1 419 433 132 27.0 2e-30 MKKFMNWLSTVFAPKMNEICSKPWIAAVSSSMQKIIPFILTGSVIYFYNVFRSYLPALPD LGMIADYSFGLISLILAFVVGQQCMEKLNHPFYLTNCGIVSMAVFMMFIIPGTDEAGNMV IQGGRLGATGIAVGIVAGLFTSIIFNLYSKLHVLEDSTSIPDFVVGWINYILPTLITLGL GMVLTKYCNFDIFEIVLWIFSPLAGFAQTMPGFILCCFIPAVLYSMGISSWLFGAVTTPI FLAGIQENINMVAQGLPATNIATSETVFTAALVTMGGMGATLALNVLMCFSKSKQLKTLG RIFIGPSIFNINEPIMFGAPVVFNPLLMLPMWLNSIVGPAIVYIVMSLGWLNIPATLNQV GQVPVPVSTVMITQDMRGILWAVVLFVVYFAIWYPFFKVFEKQKLAEEAQENAPSQN >gi|312956108|gb|AENW01000019.1| GENE 61 58877 - 59191 447 104 aa, chain - ## HITS:1 COG:CAC0384 KEGG:ns NR:ns ## COG: CAC0384 COG1440 # Protein_GI_number: 15893675 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Clostridium acetobutylicum # 6 104 4 102 102 70 39.0 7e-13 MDKMFIMLCCGAGMSSGFLANQARKAAKKRKLDTTIEARSHTDVSGYLSSISILMLGPHY GGELPKWKSLCDPYHVPVVVIPQDIYAQLNGDALIQLALDTLGK >gi|312956108|gb|AENW01000019.1| GENE 62 59530 - 61458 1756 642 aa, chain + ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 7 510 6 500 505 172 25.0 2e-42 MKKKHVELLQFLLHHATAVTSRQLAAALSISTRSVKNYVNEINLLGNQKVILSSKQGYTV QAAQAKELLSVKEESIPQTSLERGFYIVKQIMLEHSSHMDLYDLCDALYVSYSTIKADIA KMNRAFANFHIEFTCENEEVRLHGSEKDKRRLVSYVMYEETDQQFMDANIITSSFPEFPV EQVSMIIRSTFQKYNYYINDFSFVNLLLHFAIIIDRVKEGNFVETRDCDFLIESENERAL VEELCSCLEEALSISFNRNEQFEVYMLFKTNANYSLPSSEDSLKKLVGEDILALTRDIIQ KVNDSYYIDLNHETFLTPFALHLKNLLLRVRNDTYTKNPMVDAIKSSCPTVYDIAIFIAM ELMQRFHVDINEDEVTFLALHIGADIERQKTNDGKIQCILLCPDYMNMTASIYNKLLIDF GNQINIRKTISYEHELKHQHYDMLLTTIPLKCPLHKEVCLIPPFPNPNSRMDIQNTIDRY RTNKKNYILKKKFHDFFSSSLFLANEDTPNRDDVLPLLCKSMEELEYVNEGFLTSVMIRE TAASTAFGNIAIPHSMEMEALKTCIGVAISKKGIQWDNHIVHVVLLVALNKIDKQIFHDL YEALVDLFSKEDVMERMKECTSFEQFEHMMCASISYQEEEAA >gi|312956108|gb|AENW01000019.1| GENE 63 61455 - 62285 646 276 aa, chain + ## HITS:1 COG:lin2453 KEGG:ns NR:ns ## COG: lin2453 COG0561 # Protein_GI_number: 16801515 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 2 276 3 281 281 124 33.0 3e-28 MKACIFLDIDGTLLNHEIGIQESSRIAIAQAQANGHRVCLATGRPKPEVDDEIQAIPFDG CIYSCGAMVESHGKVLFYKPFSQELVLHMMHLLQAHAIGFNLEGSRTSFLDPIGYDFFHS LFQRCMEDNSELARQYMAAVRMHPLQEVKETDTLQIMKIATFINEDSLLQEFDRQLPAQL KHIHHGFHEGCTNGEIYHHTITKATGIDCLLSHFDIPLEASIAIGDSLNDAEMIRHCNLG VAMGNACEELKLISDMITTTSKEDGIYNCMKKLKLI >gi|312956108|gb|AENW01000019.1| GENE 64 62600 - 62749 146 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMSRDLMRQQPTKPMILKNCAICRQIISMRKILIMAGIMLAFIFSTYLF >gi|312956108|gb|AENW01000019.1| GENE 65 62979 - 63155 223 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEEKLSPPNGVEEHNLREKKEMEQDTGNYTYDFFTFRNVLISAVVLGVIILVISLVR >gi|312956108|gb|AENW01000019.1| GENE 66 63670 - 64176 313 168 aa, chain + ## HITS:1 COG:MA2369 KEGG:ns NR:ns ## COG: MA2369 COG2865 # Protein_GI_number: 20091201 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 1 120 33 150 510 95 35.0 6e-20 MTAFANTSGGTLIIGIDDSTRSVIGMDKDSVFQIMDSIANAVSDSCEPQIVPDISFQTIE GKCIVIVEIYAGTNRPYYLKHTGKENGTYIRVAGTSRQADAVKLKELELEGTHASWDEQI CIGYEVKEDAIDKLCQDIHRYMKSAIDSSEEKRSIAVITVEHLLNESF >gi|312956108|gb|AENW01000019.1| GENE 67 64441 - 64977 283 178 aa, chain + ## HITS:1 COG:MA2370 KEGG:ns NR:ns ## COG: MA2370 COG2865 # Protein_GI_number: 20091202 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 2 158 274 428 458 85 34.0 5e-17 MIINAQCHRSFMDSSCVQVALFDDRLEITSPGMLYGGLTLKEAVNGRSKIRNKAIAEVFS RMELIEGWGTGIRRIIKRAEEYQLRTPEFTEIGDTFRVNLFRKEEKKPIKADKKPLSEER RQRIKEYIREHGCISNREARKLLNLAESTTKRLLKQMVLDGCLIEQGEKKSRIYRLCA >gi|312956108|gb|AENW01000019.1| GENE 68 65239 - 66111 644 290 aa, chain - ## HITS:1 COG:lin2365 KEGG:ns NR:ns ## COG: lin2365 COG1284 # Protein_GI_number: 16801428 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 21 284 18 282 300 152 33.0 5e-37 MLTHSLKNKKIRYLFSCIAVVISALLQAYVIQVFITPSNLLSSGFTGVAILIDKIAALYG CHISTSVAILMLNIPVALICFKSISKKFTILSTIQFVLASVFLSFCRFQPLFHDLVLNVI FGGFLYGLCVVIALKGSASTGGTDFIALYVSNKIGRSIWEQVFIFNALILCIFGFMFGWL YAGYSIVFQFITTKTISTFHHRYERVTMQITTTIPELVIDMYVDHYRHGISCIQGYGGFS KKKMYLLHTVVSSYEVADIANLLREADPRIIINVLNTEEFYGSFYMAPME >gi|312956108|gb|AENW01000019.1| GENE 69 66784 - 68697 1823 637 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 3 477 2 486 499 179 24.0 2e-44 MGLNKRQEKIIMMMNDSNDWITGKELSKLLNVSDRTIRSDIDSINRYYENALIESNLRYG YHLNQEILRTLNIEIEQPIAQTPQERCIYIIQQLLFQRNELSITNLQDQVFVSEYSIDND IKRIKKMIEPYEQLRLVRSKNFIHLEGDEESKRKLYKDLLAEETQGNFLNLNNLAALYND FDLLIVKDTLEETFNKYNFHVREMAFPMLMVHVGIAIERILRHNYIHTERDYEELKKSQE YEIAREFFQNTAKKIRIEIVEDEIALLALLLMGKKGTSYSKDLVHEFHDSLTSDDIIDGM LEVIHDDFDIDFAQDSDLRIGLKMHMQSLMERQIRKHDVSNVYLQEIKRKYPLVFEMGIR VARYLEEQLNEVIGENEIGFLSLHLGAAFERANLSGKYRVIMIYPHDQALSNMCVKKVEN RFGERMAIVECLNFFEQKTILNARPDLILTTLPLQHDLDIATIQISLFINLEDESRIFQA LNLLDKKHFQKEFEEGISGMIEPRFFYTDVDIATHEDVINYMCDNLQASGYIPEGFKESV LKRESMSATSFAYSFAVPHSFNVMSIKSNISVAILKNPIPWGPFEVKLVILLAINDADRY MLKLFFDWLSNAVSDANRFATLLESHDYNDFIARIVE >gi|312956108|gb|AENW01000019.1| GENE 70 68709 - 69401 398 230 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2704 NR:ns ## KEGG: Cbei_2704 # Name: not_defined # Def: RDD domain-containing protein # Organism: C.beijerinckii # Pathway: not_defined # 41 216 13 194 199 88 32.0 1e-16 MIAKTTENNKKPTKHYREKKLGLIDRLSIALLKKQDTLVKDTEHSPVSNIRRFFGYLIDF MLANIFCVIPLVIIQASLTGSTNTTQILAGIPLHWAYIITFFVFLFYTFYYVYIPLKIWP GQTPAKRLLNYKIVMMDNSKATAKALFMRNVIGMTFLELAAFTTTYVVQLIVLTAKIDYP ASFGYITYFMTFLSFIITLTNYDRRMLHDYLGKTKVYMLQKEEVSDYHAL >gi|312956108|gb|AENW01000019.1| GENE 71 69812 - 71173 1118 453 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 5 440 8 441 444 281 35.0 2e-75 MFNKLEKILMPMSDVLSKNRVLIAIRDGFLIATPLLIVGSIFLLIANFPIPGWSEFWTGV FGAGWEEWFKAVSRATFNCTALLTCLGTGYAMAREFGGDKIQGAAVALVSFFILQPVIHD AVNDAGEVVLEGAFAGLSFDNIGTDGIFMALCCSILCVLLFIWVYKKGWTIKMPKGVPPA VADSFAALVPSAIVLLVCFLIRIFFEFTPFETAQGFVFTVLQTPMKGLGDTLGANAIYSF MCTFLWFFGINGPAVMNSVYFIGNVLTADQLLAFEAGTPNNELPHIFTNPFSNFFTNFGG GGSTLSLVICMLLFCKSERIKVLGRLSIVPGIFGINEPIIFGLPIVLNPIMIIPFIFVPL FNLVTSYLLTIAEILPKTTGVNLPWTTPIGFSGWLSTGSWIAAVWQIILLVIGCCIYFPF IKALDKGYLHDEENSEDTEEEDISFDDLSLDDL >gi|312956108|gb|AENW01000019.1| GENE 72 71542 - 71871 360 109 aa, chain + ## HITS:1 COG:CAC0384 KEGG:ns NR:ns ## COG: CAC0384 COG1440 # Protein_GI_number: 15893675 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Clostridium acetobutylicum # 1 103 1 102 102 76 42.0 1e-14 MKRLYLFCDQGMSTSLLASRMQVCADKHMLPIEVNAFSYKKMQGIVEEKHPDIILLGPQV KYLFDETKKRFDERTPVMLISQEDYGMMDGEKVLKKALLLLQKRKRGEL >gi|312956108|gb|AENW01000019.1| GENE 73 71873 - 72397 564 174 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_0137 NR:ns ## KEGG: CDR20291_0137 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 2 173 3 172 172 150 46.0 2e-35 MKVLMVFDQTQAGLGGKESPDLAMGGKPMAIGSCHMFEKTLTDMGGSICATLYCGDGTFA QDPDTNGKRFAAMSKKLNPDVVICGPCFNYGNYGKMAAKTAQTINELTNIPAFAIMSEEC GAAIDEFKDHVTILKMPKKGGTGLPQSLAMMCEFALKLAKKEDVSEMIREHAYQ >gi|312956108|gb|AENW01000019.1| GENE 74 72530 - 73594 1018 354 aa, chain + ## HITS:1 COG:SA1566 KEGG:ns NR:ns ## COG: SA1566 COG1363 # Protein_GI_number: 15927322 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Staphylococcus aureus N315 # 6 346 8 352 358 277 41.0 2e-74 MLTNETIALMEELTQAVGISGDERNISKIMKTHMEPYADEIIYDNLGSIFAVKKSGKPNA LRVMICGHMDEVGFMITSIKKNGLAEFICIGGMDAQSLHAQRVRLKTASGREYIGTIVCD KDEIAVCDTKHMRIDFGAENAEMAADWGVKVGDSAVLDGGFAMLGDGHRILSKAWDNRYG CIMAIELLQALKETKLDVDLYIGATVQEEVGIRGGTTATGLIHPDMGIVLDCSPANDITK DEQAVGLLGKGILIRYYDKGMMPNRLLLDTLVQTCKDQQLPYQYYYNMAQTDAAWIHKLF SGCPTLSACICARNVHTGNSMIDIRDYDCAKSALLAIITSLDENKINAYKAENR >gi|312956108|gb|AENW01000019.1| GENE 75 73604 - 74695 925 363 aa, chain + ## HITS:1 COG:BS_ysdC KEGG:ns NR:ns ## COG: BS_ysdC COG1363 # Protein_GI_number: 16079934 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Bacillus subtilis # 10 350 8 350 361 311 43.0 1e-84 MKEAYGRINLEMIRELSEAHGISGCEKEVSRIMKKWLTPVCDEITYDNLGSIAGLQKGSA DGPKVMICGHMDEVGFMVREIDEQGYIRMLPVGGWWGHVLPSQTLYVTTKEGRRYHGVVG SCAPHGLPPEVKEKVIKPLDLFLDMGVDNREEILELGIQIGDMITPDTKFEVMNNPNYLM GKAWDDRLCAALAVDVLYRIQKDAHEANVYAVGTVQEEVGLRGARTAANLLHPDVAIALD VTTALDTPMDKGDVKLGNGVVLSIMDAGIIAHKALLREMEEICRDLGLSINYDMMTAGGT DADNIHKAYDGIITMTLSIPTRYMHSHHLIIHRRDYMQTVEAIAEFCRRLSWDKVSAMRT AIQ >gi|312956108|gb|AENW01000019.1| GENE 76 75334 - 76797 1123 487 aa, chain - ## HITS:1 COG:SMb21161 KEGG:ns NR:ns ## COG: SMb21161 COG5476 # Protein_GI_number: 16264575 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 479 1 461 477 190 28.0 7e-48 MKVLFAYFSSESNEHSRSLMTFDKFVFKFGEEAVQHVSCRKVFEDAGIELIPAIIARGHP HGPVTYDAFEFIRSRMMAEVKSHVHEIDGIFLFLHGASKVIGLAGGSAEHAFLKEIREIT GPYMPIALVMDPHGNLSEELVSKVNILRCYRHSPHTDAEETFQFVAEKFVELLKNRRNIR PVYRKVPIIIGGEKSVSLDEPMVSINRLCDEAEKDERIMSASFHIGYLRHDGDKLGCSVV VVPQSGKYRAYAEEVADHIRAFAYSRRHEFHYHGNTGEPQEVLKKAVAHTGGTVFITDSG DNVGSGGDGFNTYMLRQILALHDTNHKQYLVSGIVDHNAFKKLYPRHVGEHVSLCIGMNY DELCKSVPIEGTIIAKGIPDEGYEHKKDMGTAITVRLDHAPVSVVILNDAIQFYEPEQYT RCGIVLKEYDVVVVKQGYISAEFAAYGDLCMMALTQGPTYQRSELLKFKQIYRPMWPYDD YDLEDML >gi|312956108|gb|AENW01000019.1| GENE 77 77069 - 78847 1275 592 aa, chain - ## HITS:1 COG:DR2055 KEGG:ns NR:ns ## COG: DR2055 COG1164 # Protein_GI_number: 15807049 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Deinococcus radiodurans # 123 580 6 462 467 287 34.0 4e-77 MNRYEWSLDALYKGYDDPAFQNDLKQYHDLHDELSALTEEMNTLEECCAVKEVLRLLEKE YDLSGRLHMYTILRQSVDTNDKQTLRYLNIINSRISSYSVYRSQLKDYLAHIKHMDSCIQ QDEMLKEYSFLLYTLKDKASHSLCKEEEAMLAKLSQTSTAAFSDMYYHLTANVSVECLGQ TMTLTQVKNLCHSTSRDVRKEAFLCEMKAYESIKEPLAFSINNIKRQQLMEARMRGYEDP LDKMLQDSFMKKETLNTMYAAVDKYLPRFHEYLRTKAKLLGYDNGLPWYEIYASLGTCDM SFTIEDCEAYIQQHFRNFSTDLYDMTKQAIDEHWIDYPSHTGKQSGAFCENLAWIKQSRI ITNYGNTLSDIITVAHELGHAYHGMLVENERPLNREYCMPLAETASTFNENIMYRALIND ADRENKLFLIDTQLSALCQNICDITTRYTFEKSVFEQCEERFMFASDLMQLMLEAEKKCF KDGLDPNWLHPYRWITKVHYYIPDIAFYNFPYTFGALFSSGLYAMYEKEGEAFLPKYRAL LKASTTHTVEETAAIAGIDLEDAAFWEASLESITRQMDEFLILAKETAQNQG >gi|312956108|gb|AENW01000019.1| GENE 78 79052 - 79381 443 109 aa, chain + ## HITS:1 COG:lin2908 KEGG:ns NR:ns ## COG: lin2908 COG1447 # Protein_GI_number: 16801967 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 1 101 1 101 102 78 45.0 4e-15 MEGLEKQCFQIISAVGMARSSYIEAIQEAKKANFERAREMIEEGDKSFLQGHEAHAKMIQ QEAGGEKVETGLLLIHAEDQLMSAESFKIIADEMIQNYERIIALESKIK >gi|312956108|gb|AENW01000019.1| GENE 79 79400 - 79720 281 106 aa, chain + ## HITS:1 COG:lin2472 KEGG:ns NR:ns ## COG: lin2472 COG1440 # Protein_GI_number: 16801534 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 106 1 104 104 86 42.0 1e-17 MKKIYLFCSAGMSTSMLAQEMQNVADAHGLPLEVKAYSHSKIGDIVEQLHPDCILLGPQV KYLYEETNRRFKETAPVAVIDASDYGMMNGERVLKTAIKLIKSFKK >gi|312956108|gb|AENW01000019.1| GENE 80 80120 - 81214 1159 364 aa, chain + ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 364 1 361 364 265 40.0 9e-71 MHKLGISVYPEHSTPEKDQAYMETAAGYGFTRIFTCLLSVQKAKEEIITEFTDFMNRAHA LGYEVAVDTNPDVFKHLGATPLDLKVFHDMHVDIIRLDGHFDDFLDRAITHNEYGIKIEF NGSMDSTIDYLLKHGADPHNVTICHNFYPERYSGIGWKLFMNLNEKWKGLGLHTAAFVTS REPNTFGPWPVSAGLPTAEIHRTKPIDVQLRRMLACELIDDILIGNAYASEAELKAMAAV DLSKTTIRIELEKDICAAEKKALFDYPHTGRQDASDYYIRSSLPRFFFKEEAIPERMSEQ RMFHRGDVVVVNDNLKHYRGEIEILLTDIENDSERNLVGHIANDDMMILDEMEKHPEHIF GFIE >gi|312956108|gb|AENW01000019.1| GENE 81 81582 - 82538 941 318 aa, chain + ## HITS:1 COG:CC2359 KEGG:ns NR:ns ## COG: CC2359 COG1446 # Protein_GI_number: 16126598 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Caulobacter vibrioides # 3 275 20 307 327 170 35.0 3e-42 MWGIIATWRMAAEGIEKAARILENDGISGDAIETAIKEVEDFPYYKSVGYGGLPNEEMEV ELDAAYMDGTTFDIGAVAAIKDFANPISIARRLSKENVNNLLVGEGAEKFAHKEGFERKN MLSDRAKIHYKNRVKDVQELEIKPYSGHDTVGMVCLDSHGDMTAATSTSGLFMKKKGRVG DSPISGSGFYVDSRTGGASATGLGEDLMKGCISYEIVRLMKEGKHPQEACDIAVSQLDQE LTKRRGKAGDISLVAMNSKGEWGVATNIEGFSFAVATQTQKPIVYVTKREHGKCVHEEAS SEWLENYMSTRMAPLIEK >gi|312956108|gb|AENW01000019.1| GENE 82 82540 - 83649 661 369 aa, chain + ## HITS:1 COG:CAC2723 KEGG:ns NR:ns ## COG: CAC2723 COG0624 # Protein_GI_number: 15895980 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Clostridium acetobutylicum # 3 186 2 185 465 214 52.0 2e-55 MEDKILAEIDKISEEMIQGILEVVRIDSVKSEPQKNAPFGKGVKKALDKALELAEELGFE TVNVDNYVGYAKYGESEDYIGVMGHLDVVETGEGWTHPPFSGYTDENGRIFSRGILDNKG PVLSCLYALYALKRLHIPLSRQVRIMFGTDEESGFEDLTYYLSKEKPPVMGWTPDCKYPV VYGERGRANLQIRADQAHLRQFFSFVTTYFLESAASGNRLGIDYHDDEYGEMQMRGYALR TEQEDVVFQFTLSYPACCSIQDIQKQIRTKLDSCCTLQLLHNYDPVRFEKDCFMVRALQS AYEQVSGLDGTPVTTTGGTYAKAMPNIVPFGPSFPGQKGIGHQPDEWMDIKDIIMNAKIY ALSLYKLAK >gi|312956108|gb|AENW01000019.1| GENE 83 83695 - 84438 606 247 aa, chain + ## HITS:1 COG:VC0730 KEGG:ns NR:ns ## COG: VC0730 COG3142 # Protein_GI_number: 15640749 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Vibrio cholerae # 1 205 1 205 254 144 38.0 2e-34 MNTQIEICCGSYYDARQAEAGGAKRIELNSALHMGGLTPSVATLRLIKEHTKLSVMTMIR PRGAGFHYLSQDYDVMVEETRDMIKNGADGIVFGCLDAYGNIDTEQSGHITALAKVNHKQ VVFHRAFDYVKDPFKAIETLINMGVDRVLTSGTYPTAFEGKEIIRQLQERYGDRIEILAG CGIDAMNAKELIAYTGVKQIHSSCKDWLRDETTCGERVTYSYGPQGHKSDYEVVNSKKVE HLIWSVR >gi|312956108|gb|AENW01000019.1| GENE 84 84768 - 85865 1248 365 aa, chain - ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 3 355 12 382 394 226 35.0 6e-59 MLERIQKYRRDLHQIPELELELPKTQRYLQEALRDLPCTLSSPIPSSVVAFFDAGKKESI AFRSDMDALPVTEATGRAFASRHTGCMHACGHDGHMAMLLEFAHQLSTYYKELPHNVVLI FQPGEETPGGAEPMCKSGIFEQYHIKRIFGFHVWPMLDKGVIATRRNEFMARSSEVNIDI TGKSAHAAKYQEGIDAMEIAARYLLDLYTMEQEELSAETYRLLRFGLLKSGTVRNVVSNA ARMEGTLRAFQDETYQYMKKRMLELAKPYEEQGAVFSFDINTGYPAVMNDAALVDQVLKL DPNIVLLEKPEMISEDFAHYQRRVPGVFFFLGTGTGIALHAHNFDFDEEVLEAGVKEYCK LSRME >gi|312956108|gb|AENW01000019.1| GENE 85 86243 - 87529 1520 428 aa, chain + ## HITS:1 COG:BS_lysA KEGG:ns NR:ns ## COG: BS_lysA COG0019 # Protein_GI_number: 16079395 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Bacillus subtilis # 6 421 15 430 439 422 50.0 1e-118 MSKKVLEISGVSVEQLANACGTPLYVYDENKITQKMSQFHELFQSENFDTEVLYASKAFS CKAIVQMAAIHGLCLDVVSGGELYTAMQSGFPMEKIYFHGNNKTWDELIMALEAGVGCIV VDNAMECELLVKAAQRVGTTVRTLIRVNPGVEAHTHKYIVTAHLDSKFGISISRMEDIRD MIQTLTSIPNIAFEGFHSHIGSQIFDKDAYVAEIQTLMKFVDDMQKAYGITTKALNLGGG FAAYYTSEDHPIPLQEVCQTILDTCKWERDRYQLPLEKLMIEPGRSIVAEAGSTLYRIGY QKQTENKKYIFVDGGMSDNIRPALYQAAYACDIANRMDEEKSETVTVAGKCCESGDILVE NVRLPRAQTNDLLILYTTGAYGYSMASNYNRLGRPAVVFVKDGKVRFVVKRETYEDMCKL ECDEEIKV >gi|312956108|gb|AENW01000019.1| GENE 86 87526 - 88725 1416 399 aa, chain + ## HITS:1 COG:TM1518 KEGG:ns NR:ns ## COG: TM1518 COG0527 # Protein_GI_number: 15644266 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Thermotoga maritima # 3 399 4 401 401 300 43.0 3e-81 MNVVEKYGGTSVGTIAQIKAVAAHAAKLKAQGDQVVIVASAMGKTTNKLIAMAKEIGEHV NERELDSLLSTGEQRTITLLAMAIDALGVPAVSLTGYQCGFITSDHHSHARIMDIDITRL KQHLEDDKVVVVAGFQGANEVGDITTLGRGGSDTTAVALAAKLGWECHIFTDVNGVYTID PRMYPHAKRLHEITYNEMMQMACLGAGVLETRSVELASKYGVRLYLGRALEENLDKGTYI MEKTKHLEDMPITGISIKEDYAIMRVNDLPNDGKFLNSLFAMISQLDINLDTISQQLTHD GKVNFAFYCNKQQSDVILKNIDKLHSRYPISRLLGFVKLSIVGVGISTHSGIAAKVLTTL SDHNIRYYQITSSEISISLTIEEKDKLKAVEVLGKAFDL >gi|312956108|gb|AENW01000019.1| GENE 87 88722 - 89543 867 273 aa, chain + ## HITS:1 COG:MTH1334 KEGG:ns NR:ns ## COG: MTH1334 COG0253 # Protein_GI_number: 15679334 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Methanothermobacter thermautotrophicus # 1 250 4 262 289 168 37.0 8e-42 MIPVTKYHGCGNDFIITDWELLKHKNIEDFVKHVCDRHTGIGADGCILVKQKPLEMVFYN ADGSRAPMCGNGIRCFAKYCYDEGIETAEEYDVETLAGVKHVTRVSLDPFQVRIDMGTWD DEPKSIQVDALKEPVMGYELPVGDKSVTVYSFFMSTVHTVVFVSDAFAFDYNEIGHAICH HTLYREQTNVNFVQIVDAHTLQMVTYERGVGMTLACGTGACAAARIAHEKKGCAANLKII LKRGELHIDIDDQQHVHMFGPAERILKGEVAYV >gi|312956108|gb|AENW01000019.1| GENE 88 89536 - 90417 1051 293 aa, chain + ## HITS:1 COG:CAC2378 KEGG:ns NR:ns ## COG: CAC2378 COG0329 # Protein_GI_number: 15895644 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Clostridium acetobutylicum # 5 292 5 291 293 290 51.0 2e-78 MFNVKGSIVALVTPFHEDGSVNFDKLKEILEWHVENGTDGILVLGTTGESSTMTHEEDDA VVECTLQTIKGRIPVIVGSGSNCTETAVDKSKKYAAMGADALLVISPYYNKANAQGMIAH FTAVADAVDKPIILYNVPGRTGCSISEEAVKVLSKHPNICGIKEASGNIAYAAAIARYLS DDFVMFSGNDDMVIPLLSLGGSGVISVWANIMPKEVHEMVHNYLNGNTEAALATQLHYLD LIHALFIEVNPIPVKEALNMMGKAVGGYRLPLCEMEETHRKALLHEMKEAGLC >gi|312956108|gb|AENW01000019.1| GENE 89 90411 - 91130 829 239 aa, chain + ## HITS:1 COG:CAC2379 KEGG:ns NR:ns ## COG: CAC2379 COG0289 # Protein_GI_number: 15895645 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Clostridium acetobutylicum # 1 237 1 248 250 167 36.0 2e-41 MLNVLVAGYGKMGKMIVETIEQSDDMKVVMIADGTNHPDVSTLQEHVNIIIDFSHPDNLT WIKPFVLEHACAYICGTTGHNDIQKRQVEELSSVAPVVFQANFSLGIAVFQEVLQMITPM LEESFDMEVVEKHHNQKQDAPSGTAKMLVAAMNREHTYREVHGRNGFVGKRQKEIGIHAV RGGTVAGEHDVYFFGDDEIFEIKHTANSRKIFVNGALRAARFAVTQKPGMYTMKDILFA >gi|312956108|gb|AENW01000019.1| GENE 90 91140 - 91832 748 230 aa, chain + ## HITS:1 COG:lin1010 KEGG:ns NR:ns ## COG: lin1010 COG2171 # Protein_GI_number: 16800079 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Listeria innocua # 1 230 4 236 236 254 66.0 8e-68 MDAKEIIAFIQNAEKKTPVKVYLKEKKPVAFPDCKVFGIDSRVIFGDWKVIEPILKENAE SIEDMVVENDCRNSAVPLLDKKYINARIEPGAVIRDQVEIGDNAVIMMGAIINIGAIIGE GTMIDMGAVLGGRATVGKHCHIGAGAVLAGVIEPASATPVIVEDDVLIGANAVVIEGVHI GKNAVVAAGAVVIEDVPANSVVAGCPARVIKEKDAKATEKTELVDALRSL >gi|312956108|gb|AENW01000019.1| GENE 91 92056 - 92520 285 154 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTPISVSARCCLSIDTLLELCYNNRVIRRYVMKRSLSWLELLWYLPLYIISVYYHLNSVM VLVIVAVGYTVSHYHKYTSSAEYREHYKKSFLFVHTKDTYATLQISCIWGILFSVVCCVY FFLHDTTAGIYSLIPAVLPLILLLYIRKANKKTH >gi|312956108|gb|AENW01000019.1| GENE 92 92521 - 93708 1013 395 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399858|ref|ZP_06644004.1| ## NR: gi|293399858|ref|ZP_06644004.1| hypothetical protein HMPREF0863_00141 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 391 1 383 387 186 30.0 2e-45 MKKLLLCIPVLLMQGCSGAASQPADIHMKEDRYEIEQGAQLDIYLPDEGLSCALEALWNK TYPAYRNALHFSQEDKSLQTHDLVWGKDTDAWNETAHAYPLTGIKQHLEYPWPAQLERTA IKDSFFPVSGKGLVFVYNTYTAKQRGLTAGDFDDFKSLAGKKDVYYQNRTLAYTIPFFFD REDDEDAAVSMKTVVQSSLFKERLHRYRSFHTALDLHDDTLDDEAFYEDGRYVSGLIMND TNFDSSTAYADMHLQFTAMPSYDDTSLRPMLDVYGFTASQKTRYPNAVFAFLQLVRSQEG INTLLENNLRPLVQREDVEKLGIYDAYVKQILCAMNDSQLRNTSYIKEKSSITLLDLYKN SNLLSLLQNSLYTKENDSHVQKAIHQDITHWILTQ >gi|312956108|gb|AENW01000019.1| GENE 93 93840 - 95852 1779 670 aa, chain + ## HITS:1 COG:TM0767 KEGG:ns NR:ns ## COG: TM0767 COG0366 # Protein_GI_number: 15643530 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Thermotoga maritima # 7 571 4 574 639 224 28.0 3e-58 MNYLKRLYEELEKQCRSHAKEIYNYAIPQSWNLYGYRPAKSIRSRELLVHPYEFYLFTLR NILKDADGNWKQPQLTKEKPSDKRDWLKHASVYSLMVRTATAWDHDRDDRLVSDNLYHLN DNGTFLKSILLLPLLKRMGVNTLLLHQIFPLCKTQNAHDYPVKEAVTDFRSIDPLLQDKL VKKLDAKEQCAAFLEACHLLGFRVILEYCPGKLARENSYYKEHPEWFFWFDSDQQNAYHP PRCNALPQNTLPFTYALKDFYRSEDVQQHIALFQEAPDGLHEFESLREIELDLHTTIAPS MVDQINAAIPAEQDTTIWRMYEDIHAQIPRDIRAQAKPYLMQDIIRYDLHPARKPMTALW DYLCENICWYQQELGIDGIFLEKPYLLPEKLQRAMAKAARKQRKSFVMIAEDTVSDNSPL WLSKGYDAISGSGAYEESDVWNFKFHSFSYRLKGNACLMFAACESYDSRRIASVEGNTAA IMLTVMNQFLPNGIPFMMNGVESFEVQPMQLSEYGDSKYLNALPKEDPRHRRQAYLDEYW FDYRNPNLPVLPALLEKTSAIRKAYEEAVTDPNACIPVWFDSPRDYGIGFTYIMEDRALL VVCNTNVHDSVLLHIHTENMICELPFTLASLQQIFSTKDPFTHDIMMDSFQNIPLEFDPG EVKFIELKPE >gi|312956108|gb|AENW01000019.1| GENE 94 95926 - 96534 768 202 aa, chain + ## HITS:1 COG:BH3630 KEGG:ns NR:ns ## COG: BH3630 COG1739 # Protein_GI_number: 15616192 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 2 187 6 195 213 168 45.0 5e-42 MYRLKEDTMAELEIKKSRFLCYLHKSFSEADAKEFIQQIKKLHPNARHHCYAFIIGEQNE LQRSNDDGEPQGTAGVPMLECLANRQMQDTVAVTVRYFGGIKLGAGGLIRAYSKSVSNAL DQAVITQKQKRLVYSMTFSYELIGKLDHYFRQNEVAVLDKDYGEQVTYLWMCKEPLDADM AEITNGRFLPEFIEERIVDVEV >gi|312956108|gb|AENW01000019.1| GENE 95 97040 - 97561 490 173 aa, chain - ## HITS:1 COG:CAC0145 KEGG:ns NR:ns ## COG: CAC0145 COG2816 # Protein_GI_number: 15893440 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Clostridium acetobutylicum # 2 135 4 135 174 63 33.0 2e-10 MKYCYECGEKLHMKELEHEGMVPFCESCRAYRFPIFSTAISMVTLNPKRDKILMIQQYGK PNNILVAGYVNKEECAEDAMIREMQEEIGRKVLEYRFLRSEYFPKTNTLIFNFAVVIDSE CLENVSTWEVDRAAWFTFDEARASVKPASLAQRFLLNFLSVYEQDTEHFFSHH >gi|312956108|gb|AENW01000019.1| GENE 96 97637 - 98473 1073 278 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399863|ref|ZP_06644009.1| ## NR: gi|293399863|ref|ZP_06644009.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 277 1 277 278 395 73.0 1e-108 MAIYDILCEVKDVREADTGICEFNGFLEDYLSIIETAEGKEDDYTILSQLFEKDHNLKIC ANLRLNINKDAIANQIIRYKDSFKLPKGTIKCPYVVYGSFDEHQKAIILTLGDKEEYVMA KALYYVMSEPENEYEGTRNEIIALSVNKESVDTLLDTVESFFERNRKAGIVQRELDAKLF LNYDEMYELAQKIASYQLVNLRDILAKCDDKEECINNIIANWFLLKKFSYVQYMMDKNNL NRVHEGNVKKQRQVAKEKCDAIGFVSYSELWKLVKELR >gi|312956108|gb|AENW01000019.1| GENE 97 98886 - 99494 360 202 aa, chain - ## HITS:1 COG:BH3238 KEGG:ns NR:ns ## COG: BH3238 COG0775 # Protein_GI_number: 15615800 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Bacillus halodurans # 4 193 34 229 233 112 38.0 5e-25 MLVFHCGNIDRVEVVLLYSGVCKVNAAIAAQLLIDCFAVDCIINAGTAGGIQEQVQLFDT VISERIAYHDVADDILTEFHPWMDSVYFYADENLLQSAKAYSNTTKRVILFGTMVSGEQF VTEENREQILTGFTPLCTDMETAAVAHVCYVNKLPFLAIRTITDTAGHKGIGEFEKNCAA ASAISAEIVCALLPSFCGQLHN >gi|312956108|gb|AENW01000019.1| GENE 98 99783 - 101009 1013 408 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKYREELNKIHMSEELKQRIRNAAAKQEHPQRRQKQQLRFIYGCTALCVVIVICFNVYD RNALSQQPENAAQIANSIEKNKAADEAVPGTVQEQAKESKTGSAQDRVIPKETYEPQTKT YMIGGMGVTDKAFIQKKKIKEMPYEKDRLDIQSTLPVFRKQYGNGANLDSIPEKEMQKHK KKAEELFQTIKKKTSKILNITDIMADGNGELRLILHTDKKEGTRTQQQKIAEELIKTYPE LFSFQRGDIQTSCNISMGNGTMICETEIFQAEDDDKKSLLYQVKEGATLTNAGDGVYYLS FPYDKNLEQLQDFTIMSRKEAEQVMRQGGFYSTLEPSEFSIGELEFLHVELSYGGRKEGY VSYLPYVIPVYRFYTWDAGTSKTVLLEVPALYPQDLRTLEDNHWYFKD >gi|312956108|gb|AENW01000019.1| GENE 99 101006 - 101494 584 162 aa, chain - ## HITS:1 COG:lin0443 KEGG:ns NR:ns ## COG: lin0443 COG1595 # Protein_GI_number: 16799520 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Listeria innocua # 11 158 21 180 182 87 32.0 1e-17 MDEREQLCGDLDELLEVYGDMVYRVALQNMGNIADAQDVAQDVFLRILKKKPQFTSTTHE KAWILRVTVNICKDYWKYQRLRKTVELQENLAKVKENTDFGLLYEVMQLPVKYRNVIYLF YYEELSVAMIADILQRKEATILTWLHRARKQLKNKLEEGDRQ >gi|312956108|gb|AENW01000019.1| GENE 100 101559 - 102716 338 385 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291459172|ref|ZP_06598562.1| ## NR: gi|291459172|ref|ZP_06598562.1| hypothetical protein GCWU000341_01333 [Oribacterium sp. oral taxon 078 str. F0262] # 1 103 1 100 493 66 32.0 3e-09 MWYMIDYENVHEEGLYGIEMLKKDDRIFVFYNMGDKENVENGKLREAAEKGISFQNIVLY KRGKNALDFYISSKIGEICGQGIHQDIAVISGDKGFQALCEYWMYVADIRKRIILRNTIY HALFDFEFDQLGCHDSCSDFKAIYLHCIKQYGRKMGCELYWHLKKYMEIRRNYVNVTSMQ DQRKYYVVLRGYKPGIYDTVNDYERNIIGYSNAFGRVFSSYARAEEFFLDYLADSCLAAS TASINELWNDFCYRVNQSLQYENKTIMNGSLAGYVCGGVHADTRRFYAFWIIASKDGIVM KMKNIIHENEKMKKIGAVGGELLAGKAVLAYALKYEYQEIKMYCSHIKVADWTERDVHTD KLPYRLHAVIGKAKERLKVTALHFQ >gi|312956108|gb|AENW01000019.1| GENE 101 102951 - 103439 704 162 aa, chain + ## HITS:1 COG:BH3351 KEGG:ns NR:ns ## COG: BH3351 COG1522 # Protein_GI_number: 15615913 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 2 162 3 164 164 120 44.0 1e-27 MKKELLLSLLETNARYSTRDLADVLLEDEESVIHTMSDLEKKKVICGYHTIINWEKTNKD KVMALIEVDVTPERDFGYDRVAKNIYRYPEVDTMYLMSGKSEFIVIIYGRTMQEISNFVG AKLATTENVVSTSTFFVLKEYKVNGIVLDEEEKPNERLVVTP >gi|312956108|gb|AENW01000019.1| GENE 102 103439 - 104608 1319 389 aa, chain + ## HITS:1 COG:BH3350 KEGG:ns NR:ns ## COG: BH3350 COG0436 # Protein_GI_number: 15615912 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus halodurans # 6 388 11 393 393 437 54.0 1e-122 MYEKFLSKHVQTIKPSGIRKYFDLASEMEGVISLGVGEPDFDTPWHIREAAIYSIESGKT HYTANQGLLELREEICLYQKRRFQLDYDPVDNVIVTVGGSEAIDIAMRAIVNPGDEVILM EPSYVAYTPSVELTGAVPVHIKLEHEDQFKLTPEKLKAAITPKTKAILMNFPSNPTGGVM TREDYAKLVPILKEHEIIVISDEIYAELTYDGTFCSPANFNEIKDQVIIISGFSKAYAMT GWRLGYVLANKTFTDAMNKIHQYIIMSAPTAAQYGAIDAMRNGDIHVAEMRESYMTRRNF ITKGFNRIGLPTHLPHGAFYIFPDIRGTGLTSDEFCVQLLEDQRVACVPGTAFGDAGEGF IRVSYAYSIDHIREAIERIDHFMEKFRQK >gi|312956108|gb|AENW01000019.1| GENE 103 104794 - 105696 903 300 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDHLPAQEAKHVINLLSGLFLYAYRTKNKKAKVTMDNIEHLCHVGSTIVFRNEQSSRRLI SQYLKLHPQLPKEDAACIARFQGCRKQQLYVMMYEQEYTFVMDRRGRTLYGVKGITDSLS FLLRNQTLPCMVQYAILPYKNHFILDSIGNTQAIADLSFVVELFEEYRGIAMEKGALLSE HETASFSVLERNMQEKKEELFSDYLNPLNAILWNAGQDQKNSFLELALTAWNLSYGSDKQ AEEFFPRDVFRRYVKPLMEYRRTAFANVKFLIDRLEAPLEGETCMRVVEKKEIEQLELEL >gi|312956108|gb|AENW01000019.1| GENE 104 105748 - 107124 1389 458 aa, chain - ## HITS:1 COG:CAC0847 KEGG:ns NR:ns ## COG: CAC0847 COG0534 # Protein_GI_number: 15894134 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 1 455 6 459 459 281 36.0 2e-75 MIDRKVFVRLLLTIGLPIVLQQIISLSLNMIDTFMIGSIGVGELAAVGAANKVYFIFSII CFGIYSGSSIYVSQYWGIRDVENIRKVIAIEMRIGFFLALFTVGLALVFAPQILHLFVRE PDVVAIGASYLRITCFTYLMTAFSFLMSFNSRAIHNLKVPTLASVLAITVNTVLNYGLIF GNFHLPRLGVEGAAIATLTARFVEMLLILGYVYFSEDHPLAVDGATIRRLDVPLMKRVVK TALPVAMSESAWSIGTTVCFIAYGLLGTSAVAVVQVASVINDLFQCVFFGLGNACAVMIG NELGRNHTKLAYSYGRVFIGINIGFCLVMTAALLLMKGRIIDIYNYDAATSQMLNLTLIA YALYTTPKMMSYVHICGILRSGGDTKFCMFCDLIGIWCVAIPMSFLAAAVWRLPLHWVVA LSFSDELVKAMVTLWRFRSKKWIHVLVRREQECEISGA >gi|312956108|gb|AENW01000019.1| GENE 105 107543 - 109030 846 495 aa, chain + ## HITS:1 COG:BH3853 KEGG:ns NR:ns ## COG: BH3853 COG3711 # Protein_GI_number: 15616415 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 20 396 22 407 700 92 25.0 2e-18 MKPYLLYPVLEQLIVSPFCTTFQLAKQVGLSEKTVRTYLKQADALLAAFSLTLTRKPGCG ITLSGSRENMMKLQTYLLDEKTRCPLILPRERVSYILYSLLRFSRPLRMFQLEETLHISR SSLYADIRKAEQWLRTYQLSISHTRGGIHVLQGEKRIRKALAQLVNELHEARTITFHKPL NDFVEACFSDNTVKRNILLYIRQFEVCSFLQLNQADKEYVSVLYYIALDRISRGNHVHMH SPNPLQKTALFQQLMHLRKEIEHHLQQTIPEEELSYALSVLLTLKNTNTGLLQTPEIQAA CKEILRRFTPPIYARYPKIDSDTFEKRLFQHLSNVLEKSVYYYEYDNPLKDAMKAKFPIP YQMASSMKEIVQDICGLQLPEDEISYITLHIAAALQYTLQPLEAVFLYEHRYSELIFSLR LLQTHIQEVKIQRVIRWQEVSEPDSWMHYPVIFSTFPLTVPPSVHWYQIPMLPDQTFLQR LRDDIQSLFNHQNHF >gi|312956108|gb|AENW01000019.1| GENE 106 109069 - 109884 569 271 aa, chain - ## HITS:1 COG:CAC0698 KEGG:ns NR:ns ## COG: CAC0698 COG0561 # Protein_GI_number: 15893986 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 5 271 4 273 276 116 28.0 5e-26 MPEIRLIGLDLDGTLLRKDNSVSDENISALQECIKQNIQIYLISGRPYCFTRMIAEKIHP SVRVISSNGAIYEIGTKCIMHTIEPHVLYQIIDVLKEHAHAHAFFKGKHEFFTHEPYDER FLYDHINNQLPAAVQVTSFTGMSWEELKHHAHDIAKILVYDMQTERLLKARKQIECIENI TVTDYQPISFDITAGGVHKGNAIKAVLQSLHLKKEEFMAFGDAMNDLPMFAEAGLTVAMA NAAEEIQASCDIVTADYMDDGVAKAIQRYIL >gi|312956108|gb|AENW01000019.1| GENE 107 109877 - 110995 1362 372 aa, chain - ## HITS:1 COG:TM0111 KEGG:ns NR:ns ## COG: TM0111 COG1454 # Protein_GI_number: 15642886 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Thermotoga maritima # 4 346 6 355 387 196 33.0 7e-50 MFHYYQPTKIHFGAGQLNELGHICRGYGKTCFLVTTPDAPLQPLYERVKKLLDAEGISVI HFDKVEPNPSVEIVEQGFAMLKEQPADFVLAVGGGSSIDTAKAIAFANGKESIDWDHLFN EYSSPFAYYPSYSEKHLPLLSVPTTSGTGSQVTQAAVITRGKEKITFFHPDNFSQETILD PQLMLTLPKRMSAATGFDAFTHAFESYINANASPYSAMDSMEAMRLVIDHLPHVLEDPQN LEFRTNMCLADTLAGRALANSGASAPHPLSEIIGGIVHLPHGEALAVVFPAFIQHMADKN KERFADVAKLFGSDDLYTAMIEFLETIGLHKKLKDFGVSEEDFQEILASPVLDHLPFGSR EELEAILKDSYA >gi|312956108|gb|AENW01000019.1| GENE 108 111200 - 111832 855 210 aa, chain + ## HITS:1 COG:SPy1678 KEGG:ns NR:ns ## COG: SPy1678 COG0176 # Protein_GI_number: 15675540 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 207 1 209 214 111 31.0 1e-24 MLYLIDSGNAQEIEEALMLGARGVTANTSMYRKNDIRLHDFVNGYSNRELDFLSGEVIGT YEEMLQQTEELLALYSEIVIKINFSKDGLHLADTLHKRGVKTAMTLIFTMGQAVAAINVH VDYLFFFIGRNEEYGSDAMRILSNIQEMIAAKRYPVKTVAASIKNLAQLEKLAAMKVDYA AIPYTLYMKSLEHPLTDSGARTFEDDFYLR >gi|312956108|gb|AENW01000019.1| GENE 109 112020 - 112643 619 207 aa, chain - ## HITS:1 COG:FN1841 KEGG:ns NR:ns ## COG: FN1841 COG2376 # Protein_GI_number: 19705146 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 19 206 15 202 202 91 29.0 8e-19 MDVKYIKSLLNCFAEVMQENREFLIEQDSVVGDGDLGLTMSDGFQAAAEAVRKSDETDAG KLLYMAGKAMSVAVPSTMGTLMASGFMQAGKALKGVCELDLNHIAQFFQAYEAGVMHRGK ANINEKTFLDGIDPAVQSMRSSLKNHESLESFAQKAYEAACAGYENTATMLAVHGRAATR GEMSRSLKDPGACVAMLMMKAFVKSVK >gi|312956108|gb|AENW01000019.1| GENE 110 112655 - 113665 848 336 aa, chain - ## HITS:1 COG:mll7280 KEGG:ns NR:ns ## COG: mll7280 COG2376 # Protein_GI_number: 13476064 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 2 334 6 335 337 337 51.0 2e-92 MKKIINDPNKYLSEMLEGIYIAHQNQLTYVNDDPQCLVTKTKKTGKVGIATGGGSGHLPL FLGYVGDGMLDGCSVGDVFQSPSAEQMHAITKEIDSGAGVLYIYGNYNGDIFNFDMAAEM ADFEDGIRVETVLGADDVASIGPLSQDEKTTRRGVAGIFFVYKCAGAAADKMMSLDTVTR IARKASWNTRTLGVALTSCVVPRVGHAGFHIEEDEMEIGMGIHGETGIRRGKIETADQIT EEMMNKIIEDLPYAPGDRVAVLVNGLGATSLDEQYIVTRKINQLLMDKGIAVHRYYVGEY ATSLEMAGVSISLLKLDEELTELIDYPANTPFFKQL >gi|312956108|gb|AENW01000019.1| GENE 111 113646 - 114275 414 209 aa, chain - ## HITS:1 COG:lin0293 KEGG:ns NR:ns ## COG: lin0293 COG0406 # Protein_GI_number: 16799370 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 4 198 9 208 211 121 35.0 1e-27 MYFYFVRHGETLSNIWHTLQGWSDTPLTEKGIAQGKALGRGLANTPFEKIYSSTSERAYD TACYIRGKRNMEITMCRGLKEMNFGTFETKANTFAGCETYLQRIQFPWKAAGGENLEDVC QRIHQTMRQILEENKGGHGNILCVSHGISILAALHTADKEVYEECLRNEVRFGNCSVTII GYHKGRYTVECINSTEYVTKGGYYEKDYQ >gi|312956108|gb|AENW01000019.1| GENE 112 114280 - 114948 787 222 aa, chain - ## HITS:1 COG:TVN1450 KEGG:ns NR:ns ## COG: TVN1450 COG0235 # Protein_GI_number: 13542281 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermoplasma volcanium # 1 191 1 185 218 110 35.0 2e-24 MLENLKKDVCEIAKRAQRDGLCKHKSGNFSARDVKSGYIVITPTSVDRELLTPRDMIVMD LEANVIENLSGLKPTSESLMHITIYKTRKDANAIAHTHSMYATTFALLNKPIPAIVYEVA NMGLTKGRVPVAPYGRPGTMELANSVVDACMEAESFLMESHGAVAFDSQDIYEAFLKAAY IEELAQLYYNAVTVLQGKEPKSFAQEELQKWEYPKEIKFPKQ >gi|312956108|gb|AENW01000019.1| GENE 113 114942 - 117020 1602 692 aa, chain - ## HITS:1 COG:BH0193_1 KEGG:ns NR:ns ## COG: BH0193_1 COG3711 # Protein_GI_number: 15612756 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 1 523 1 519 537 266 32.0 9e-71 MSLDERGLNILKLLVNNPTISGSQLEKEAGLSRKQLSYSLAKINFYLKENGFEEIGRMRT GKFIIPHNVINSYKTNQFTFDEGAYVFIEKERLYLIALILLQHKEELSINHFTSILRISK NTVLNDLKKLQTVILQEFDLKLWYDRSKGYYLVGKEYEKRTLMIRMIQSILPLLSGESIL LSILEIDEERIRMLCADVEEVEKTLKVRYTDERIREIPFILYFILIRIEAQKFLDVLPED YQHIAGTSEYGSIMNIFAKYDIQNTMDKLYLVSQFQISSVNFEDSRSKKFEKELAEAAEK TLENFENLVCIRFQDRKALLDALIQHLKPALYRIRYQYHIEGNILNMILPHHSYLFEITR HAMVPFEEMFHILIPQEEMAYITILFGGWMTKEGTLDFLEKKRRAIVVCTNGISISNFLF LKLKEAFPELEFLCSLSSRQFYEYHKEYDVVFATVHLDTAVPQFLVKPIMDDNDLHNLRK KVFNELLNKTIYEVNSASLLHVISKYVDVKDRKGLLTALKSYLGETTQEMVLTEHCHQMD TNNLHDLLTPETVHIAEHELTWMEAIQTASEPLLRNGCITTKYIENMIYSVKYDKPIWTI ADGLLLAHASVEEGVNALGMSLLKLPESICFNGYMEAVIVVVMATPNREIHLKALYALID IVENEEDFNRMKSTDSISEILDIISKERYEVC >gi|312956108|gb|AENW01000019.1| GENE 114 117098 - 118096 855 332 aa, chain - ## HITS:1 COG:SMb20314 KEGG:ns NR:ns ## COG: SMb20314 COG2376 # Protein_GI_number: 16264048 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Sinorhizobium meliloti # 1 329 1 329 330 357 58.0 2e-98 MQRFVNDPDMIVDDMLKGYVKCHKDILHISEKNDHVVVKNRQRKHKVGIVSGGGSGHEPC FLGYVGEHMLDAVAVGEVFSSPPATAFHQAFLEADTGAGVACLFGNYAGDNMNVKMAVQM AAMQQVNVRYVTANDDIASAPLDEKEKRHGIAGSLFMWKIGCAKAELGGTLDEVIDAAQA AVNETRSLCVGLTPCSIPAVGHANFEIQEGTMEYGIGHHGEPGLIVESLKSAKEIAAVLC EKIEADLKLKHGEEISVIVSGLGGTPIMELYVLYDEIENYFTERDISVYRSFVGDYVTSL EMSGAALTVMRMKEEFKELLDFPVDTPAITIK >gi|312956108|gb|AENW01000019.1| GENE 115 118080 - 118751 428 223 aa, chain - ## HITS:1 COG:YPO3349 KEGG:ns NR:ns ## COG: YPO3349 COG2376 # Protein_GI_number: 16123499 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Yersinia pestis # 7 206 18 218 224 162 46.0 4e-40 MSFTNKEGKLIVLNIIDTIQKHKDYLSEIDGAIGDGDHGINMNKGVTIAKSQVDKNETLS EALCTLSCVLMEKIGGSMGPLYGSIFMGMQTALGNAEYINGAIIEKMLKQAYDNIQMISP AKPGDKTLVDVLAPAVSAYASVFEKTQDTCAALTACSQAAEEGMQATCDMQAKLGRASRL KEKSIGHQDAGATSCCLILQTFCSTIIALEKASRKETGDAAIC >gi|312956108|gb|AENW01000019.1| GENE 116 118754 - 120133 1464 459 aa, chain - ## HITS:1 COG:lin2200 KEGG:ns NR:ns ## COG: lin2200 COG3775 # Protein_GI_number: 16801265 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Listeria innocua # 1 442 1 439 449 448 57.0 1e-126 MEILSDVVNYLLSLGAAIFVPIIIIIAGLIVRMKLKDAISAGITLGVAFTGMTMLINFMT GAISPAAEAMLKNTGISLPIVDGGWTTMSTISWSWPYAFLMFPLMIVINIIMLVIKKTNT FNADLWNVWGKIFTAVGVVAITGSVPLAFLVAAIQIVFELKTADVHQRRIEELSGIPGVT CTHKMVLFGALMYPIDCLLKKIPAFNKKFDAAALKDKVGIFAENHVLGFILGVIFGLLAQ YPVAETLTLAIQCAAALTLFPVITKYFMQALSPISEAVSDFMNKKFKGRTLLVGLDWPFL GGSNEIWLAVIWSVPVTLICAMLLPGNAILPFAGIINIALAVPAYLVTKGNLPRMLILCT LGVPAFLWVGTAFAPFITDLANTTGAVALKAGEMISNSSIDGPVFTYAISQVFDVINGNW IPIIVLFVWVTCYAFYYRALSKENKLAEAKDGNAKAAGE >gi|312956108|gb|AENW01000019.1| GENE 117 120166 - 120450 351 94 aa, chain - ## HITS:1 COG:lin2201 KEGG:ns NR:ns ## COG: lin2201 COG3414 # Protein_GI_number: 16801266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 1 90 1 90 91 101 64.0 4e-22 MKKVIVACGSGVATSQTVASKVNRLLKEKNVDAKVDAVDLKSVDRYLVDAAAYITITKVT KEYPIPVINGIAFLTGMNQDAELSKLIEAINNAK >gi|312956108|gb|AENW01000019.1| GENE 118 120463 - 120747 194 94 aa, chain - ## HITS:1 COG:lin2201 KEGG:ns NR:ns ## COG: lin2201 COG3414 # Protein_GI_number: 16801266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 1 92 1 91 91 79 46.0 1e-15 MKKVIVACGNGVATSQTVAFRINRMLEKENITNVRVEAVNLRSLQRELHGALAYIDITNS HMDYGIPTVNGLAFLSGEHKEEAFQELIKIIKNR >gi|312956108|gb|AENW01000019.1| GENE 119 120747 - 121211 626 154 aa, chain - ## HITS:1 COG:lin2816 KEGG:ns NR:ns ## COG: lin2816 COG1762 # Protein_GI_number: 16801877 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 16 151 17 152 154 87 30.0 8e-18 MNDTLICDELCELDLDVRSTDEFFEVMSKKAVDLGYVTEQFLSAIKKREQDYPTALPVKP YPVAIPHSDPINIVKQFIAPVRLKNAISWCEMANNDSILSVQIVFLLGFKREEGHVEILQ LLLQNFQNEDTMESLLKAATKEEFLEIVKQMEGL >gi|312956108|gb|AENW01000019.1| GENE 120 121614 - 122207 713 197 aa, chain - ## HITS:1 COG:BS_tdk KEGG:ns NR:ns ## COG: BS_tdk COG1435 # Protein_GI_number: 16080759 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Bacillus subtilis # 1 192 1 192 195 261 63.0 8e-70 MYQQYKEGWLEVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCG STAKSFVINRAHEIFDYIDDSYDVIAIDEVQFFDEEIVEICDYFADHGKRVMVAGLDMDF RGEPFSVMPQLFTHAEFVTKLTAVCTICGAPATRSQRLIDGRAARYDDPIILVGASEQYE ARCRHCHEVPGKPLIHK >gi|312956108|gb|AENW01000019.1| GENE 121 122418 - 122621 290 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167754815|ref|ZP_02426942.1| hypothetical protein CLORAM_00319 [Clostridium ramosum DSM 1402] # 1 67 1 67 67 116 73 8e-25 MKKGIHPEYHRIMVKCTSCGAEFETGSTSKELRVDTCSNCHPFYTGRQRFAAAQGRIEKF NKKYGLK >gi|312956108|gb|AENW01000019.1| GENE 122 122985 - 123932 861 315 aa, chain + ## HITS:1 COG:no KEGG:PST_3826 NR:ns ## KEGG: PST_3826 # Name: not_defined # Def: hypothetical protein # Organism: P.stutzeri # Pathway: not_defined # 43 304 40 292 295 72 27.0 2e-11 MSNARNQLNYSNDLFFKYALSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIIGK KRIILDVHVKDEQNRHFNIEMQTTYKGLAEMMRFEFYGARALNNQLKSGELYDQLKPVYQ IIFIDEYAWNNRNLINQYQMRNEQGENESYYPLILRTFVHMPAINDIVKEKEMQRLNDFE QLVYLFENNEKNDILKSKERLVKVFMDKYEEMQKDDELWSTAMAIQMGEARYRNGLRDSF EEGKAAGKMEGKIEGKLEGERQLLHRQMQIKFHEDCAMWLQALTEEQMHIVSTLVLECDT FESVKKRISKSDTTI >gi|312956108|gb|AENW01000019.1| GENE 123 124218 - 125735 1266 505 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2321 NR:ns ## KEGG: Cphy_2321 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 26 493 21 507 694 66 20.0 3e-09 MKWKRRGMVFMMNDFKAYLRYYVNSNKRLLILVFIILFLIMPFFTFNYMGLPRGPYSLDT FYMGFIALGAATCAGGCILSYLLPIYNFRYLYKKRSHEMYFSLPIQRKHLFLYNYISGLL VVLVPLLMNYLLGYFIMLGLGYRERPLYMLIPLIFFLGLSILLLIQYSIFTFLSVKCNNL IDSILVNGAYVVMPFIVMLSATIFFSNQITAILGDIGASPSEFINMGMIQMLLSMPSTIY AFLFNMIASMASEMHRIDTLINAFNWLYFLYWGVIGVLCFWFGWKSFVDRKPEDAEQRTV TLFGYPVIITVITFCMVLFVMNINGGVVVPSLIILVAYFCMIFFSNRKIQIKKLHVIVFA LLYIGTFGFSYMYTQTKGLGMVKEFPSLTDMKRVNIDVNSSSIENDSAMQFYDAKNKEYY DGYGTSVQDEESMKDLLDVQKEVSTRSVKEYFYDNAFYISISYIKQDNFQVSRNYTLKMN KKNKDYLQKLMEELKHTEKFSVMQH >gi|312956108|gb|AENW01000019.1| GENE 124 125695 - 126588 1063 297 aa, chain - ## HITS:1 COG:lin2912 KEGG:ns NR:ns ## COG: lin2912 COG1131 # Protein_GI_number: 16801971 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 2 296 1 294 295 155 30.0 1e-37 MLKIRSLTKKFKEKTVLMDVNLDIHSGSVFGLIGPNGSGKSTLLKIMAGIMKPDLGCICI DDERVFDNPKVKRDILLISDDPFYFFNATLKDMKEFYRVWYPNLNDEIYEKYRAIFKLDE NKTLKNFSKGMKRQSFIVLALAISPKYLFLDEAFDGLDPVMRLTFKRAISKMIEEKEMTV IISSHNLRELEDICDTFGILEDNTIRTAGYVDETKENIHKIQLAFKEEKREDDFKALDLL SMHVQSRVVNLVVKGDIEKIKNYLNTMDPLMMEVLNVNLEEVFIYEMEKKGYGVYDE >gi|312956108|gb|AENW01000019.1| GENE 125 126581 - 126955 403 124 aa, chain - ## HITS:1 COG:lin2343 KEGG:ns NR:ns ## COG: lin2343 COG1725 # Protein_GI_number: 16801406 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 112 1 115 129 86 47.0 9e-18 MFVIDTQSKLPIFEQLKKQILEFITIGILSPNDKLPSVRAMASQIGVNPNTVAKAYQELE EHGYIYSEKGKGCFVADNESDKLIREEKLKDFKGTVLDMKQHHIEKEALYKVVDSVYEEG KDHA >gi|312956108|gb|AENW01000019.1| GENE 126 127221 - 128285 1166 354 aa, chain - ## HITS:1 COG:PA2504 KEGG:ns NR:ns ## COG: PA2504 COG4859 # Protein_GI_number: 15597700 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 263 346 115 197 205 71 41.0 3e-12 MSQKKITYIKLLHQLEKKMKTKRLEGKVAIQREEFEILLSGIPSILNGYDLVTLEVGENI NREALRKHLKEQFEITDKESAIRAIKAFLNDNVQWQYEQFLGFWRDEPQFDLEELDEKAR LFFEGCKTFAKQFYPFLKDQGFAGFDYGECVRMIRECYAVELLDRETADTMLQDIGTRAF RQFDSWEEYALSYLCGGCYFMFRSSGMNNDYGSMMLQNELQAIEKLFFENRTNVWNRYSW LEGKKYFPGIKEGKKLIDSTLGCFVTDRVSIDQDAICYMVREEPSKDNPDSGWRIFAGDE TQEYIDDIEHTQVFALNTVCNYDPEIIPFLDEPIGTVIVRNREGKLEIEEKQTQ >gi|312956108|gb|AENW01000019.1| GENE 127 128485 - 129015 616 176 aa, chain - ## HITS:1 COG:no KEGG:Ccur_04340 NR:ns ## KEGG: Ccur_04340 # Name: not_defined # Def: predicted transcriptional regulator # Organism: C.curtum # Pathway: not_defined # 3 87 4 92 245 65 42.0 1e-09 MITIRELADSCNISVRTLQYYDQIDLLKPSGYQGRIRVYDEAAKKKLKCILAWKVLGLSL EEITKLQQGVMDREQLLILLEQKKEQLMMSKDALLKNQMQVDDILFHIRQSKEWNPGDYT EILSLQTTDHPYSLTTHLVALLRNMTLLKVIILIFYILDALCIAALIAECATLLFP >gi|312956108|gb|AENW01000019.1| GENE 128 129015 - 129560 642 181 aa, chain - ## HITS:1 COG:AGc1709 KEGG:ns NR:ns ## COG: AGc1709 COG0789 # Protein_GI_number: 15888277 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 104 3 110 140 58 34.0 6e-09 MYQIHEVCERCHLSRKAIRLYEEKGLLHPDRIQGNRMYNKEDVVRLQCISYYRGLGFSLE QIQQLLHGSSEKCLKELLMTHKKQLNQKLEEKQEQLRAVNNVIHAIRQHEEFDITAAVSD EQHDDDCVEGMLIWKWNSIYQIYNYRCSRKTYRHAVISTRLFCAILVIVLVFAWLEKGGI L >gi|312956108|gb|AENW01000019.1| GENE 129 129644 - 130420 854 258 aa, chain - ## HITS:1 COG:CAC0531 KEGG:ns NR:ns ## COG: CAC0531 COG1737 # Protein_GI_number: 15893821 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 248 1 246 257 177 40.0 2e-44 MKLAELVNQHYKELSSNDLYIWDYIQAHGKECQNLSIVELAQRCHVSKTTILRFAQKLSL KGYSELKVYLSWENRPSGDMVIDEHLIEHVCDTSKYAIDELRERDFTDICEMLYHSGRIF VYGTGALQDSVARELQRMFLYCGEFVYVLSGEKETEMVLPFLSRDDVVILISLRGEGELI NEFASQLRLRSIKTISMTRLKNNELAHKCTKSIYITTSQVMIGNHILHEAANLYFVLAEL LFLRYSQYKQKQDGIGIR >gi|312956108|gb|AENW01000019.1| GENE 130 130591 - 131916 1735 441 aa, chain - ## HITS:1 COG:CAC0533 KEGG:ns NR:ns ## COG: CAC0533 COG1486 # Protein_GI_number: 15893823 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 1 440 1 440 441 729 75.0 0 MKKFSILIAGGGSTYTPGIVLMLLSHLDRFPLRSIKFYDNDADRQKIVADACEVLIRERN PEISFLATTDPETAFTDVDFVMAHIRAGKYAMRELDEKIPMKYNVVGQETCGPGGIAYGM RSIGAMLELVDYMEKYSPQAWMLNYSNPAAIVAEATRKLRPDSRILNICDMPIGIERHMA EILHLDSRKDMDISYYGLNHFGWWTSIKDHAGNDLMPVLKEHIKEKGYCVEAQMYQHTDD SWTDTFRKARDVYALDPDTLPNTYLKYYFYPDYVVEHTDPAYTRANQVMDGREKFVFGEC RKIAEAQSSEGADLHIDEHASYIVDLACALAYNTKEKMLLIVENNGAVQNFDPTAMVEVP CLVGSDGPQALCIGDIPRFQKGLMEQQVAVEKLVVEAWAEQSYQKLWQALTLSRMVPSAS VAKAILDDLIEANKDYWPELK >gi|312956108|gb|AENW01000019.1| GENE 131 131973 - 133547 1994 524 aa, chain - ## HITS:1 COG:BS_glvC_1 KEGG:ns NR:ns ## COG: BS_glvC_1 COG1263 # Protein_GI_number: 16077887 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus subtilis # 1 440 1 441 452 491 53.0 1e-138 MKQKIQKFGGAMFTPVLLFAFAGIMVGLATTCMNPQIMGDLANPESIWYKFWAMISAGAN TVFNQLPVLFAVSLPIALAKKQNARACMETFVIYITFNYFVSEFLNQFGSSLGFDFAADV GGTSGLAMIAGIKTLDTGMIGAILIAGIAIYLHNKFYDKELPDYLGVFKGSAFVVMIGFF VMIPVAILIALVWPHVQSALLGLQGFFKASSAAGLFTYNLLQKLLLPFGVHHFIYAPVLF DNVIVDGGTISYWAQHLPDFVNSSKPLIELYPLGGFSNGELAKIFGVIGVALAFYKTARP EKRKMVVALMVPACLTAMMTGITEPLEFTFLFVAPVLYVVYSVLSALLAVVMLLFGVIGN FGQGIPNIIFLNLIPLFKNHEMMYVWMLVIGIAFTAIYYFVFKFMILKFNYATPGREAVD EDAKLLTKDEYKALKDEKQSFGSDRFDVKGIIAALGGGDNILEISNCATRLRLLVKDEKA VQSLEEFKKYGAIGLVKNGTSIQVIIGLDVPKVREQAELLLGRE >gi|312956108|gb|AENW01000019.1| GENE 132 134164 - 134475 323 103 aa, chain - ## HITS:1 COG:no KEGG:Clos_2843 NR:ns ## KEGG: Clos_2843 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 97 3 99 109 84 45.0 9e-16 MKIITVCGSLKFRNEIMKITEEMTLQGNCMLSIVYPTNSDIAVYTREERELLGDMHKERI RISDAILVVDIDHYIGSSTQGEIEFARALVKEIIYYTDIVGTM >gi|312956108|gb|AENW01000019.1| GENE 133 134763 - 135299 574 178 aa, chain + ## HITS:1 COG:CAC3334 KEGG:ns NR:ns ## COG: CAC3334 COG0655 # Protein_GI_number: 15896577 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Clostridium acetobutylicum # 1 178 1 178 178 187 47.0 6e-48 MNILVINGSPHVKGTSALLMEEFIRGAQEKGHEIHVFHAAREDVHPCIACDTCRKTGNGC VFKDGMEKLNPMLADAELVVFVTPLYYFGMSAQIKAVFDRFYANNTALREQQKKTIVLAT CGDTEDWTFDALKHHFEDAFRYMRWTCIGSVYALGMYVREDIEQSDYPREAYELGRSL >gi|312956108|gb|AENW01000019.1| GENE 134 135430 - 135951 196 173 aa, chain - ## HITS:1 COG:no KEGG:MARTH_orf136 NR:ns ## KEGG: MARTH_orf136 # Name: not_defined # Def: hypothetical protein # Organism: M.arthritidis # Pathway: not_defined # 4 93 2 91 201 78 42.0 1e-13 MGENLMMKMEERMKNSPKGTIFTNSDFYDISNPDAVKMPLHRLYSSNKIYRLISGYYTIP YYSNVLHEYGYPSANAMAEKFAEKYAWNICPSGVVSFKKKFYPCNWARYDLVLQGGCKLV PKENAIAYFGKDYKAMSNMIYGESIPCETMMKRIQQFEEQLNKTVLDQIKIQG >gi|312956108|gb|AENW01000019.1| GENE 135 136289 - 136504 74 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYAYIWRPGFFYRDGMVFLLEGMELHIALPDYCEMEDVYFTYSCHKQQEQLSTNHFNEIP QNTLTKKHKVH >gi|312956108|gb|AENW01000019.1| GENE 136 136555 - 136746 180 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTKTVLPALLTAIFVCLISCFFIYYGIDSDQIVLSVIGGALLIVGILRLVLFTKAYREQ KEK >gi|312956108|gb|AENW01000019.1| GENE 137 136747 - 138720 2520 657 aa, chain - ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 8 537 4 530 536 672 60.0 0 MCKECKNKKPYYITTAITYTSGRPHIGNTYEIILTDAIARYKRQQGYDVFFQTGTDEHGQ KIEEKAKEAGVTPKEFVDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQVQKIFKKLYEQ GDIYKSTYEGLYCTPCESFWTESQLVDGKCPDCGRPVEKASEEAYFFNLQKYAPRLIKHI EDHPEFIQPESRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYI TSLGFDADGNHGELYQKYWPADVHIIGKDILRFHTIYWPIMLMALGEPLPKQVFGHPWLL VGDGKMSKSKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANV LGNLVNRTISMQNKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEI FTLLKRCNKYIDETTPWVLGKDEAKKDRLATVLYNLLECIRFSAVLLSSYMPETAEKILE ELSTSERDADSLKEFGMLECGHTVEGKPEILFARIDAKEFMETLEADRKKEEKAAKKADK KEAKKEDAPVEQIGIEDFTKVELKVGTIISAEKHPKADRLLVEQIDLGEETRQIVSGIAA SFSPEDVVGKKVIVVTNLKPVKLRGVESQGMILCASNADDLDIVTIVKDLPNGTKVS >gi|312956108|gb|AENW01000019.1| GENE 138 139323 - 140576 1265 417 aa, chain + ## HITS:1 COG:no KEGG:BLA_0104 NR:ns ## KEGG: BLA_0104 # Name: not_defined # Def: oxidoreductase # Organism: B.animalis_lactis # Pathway: not_defined # 11 395 22 432 456 93 23.0 1e-17 MKKIGLALLCLLMACGVSAMVLYGIWNQYNPTAIIGSSIQTENTDVKKVTEQWFAEFFKQ YEGPFVPFEFRIRDKRVKTIEVLNKEEGFVQLDYEFRPASDNPYVTSYYTAALQENGWYV AQVVLQLEKTLNGYTVKNKMSPVQYQIQTDPSLRKPPTTHYAMADRKETYAFSQNQLYVT YDAGKSFTEVPVPYEDIAGTNNSTYNELLPAHGYIVSRDFTAFVCYDETGSYLQYSEDMG KTWEKSRIISRTYRGDTLYLSKTENSCYITLATDRSLGHEYYSTFKSSDLKTWKQLFGKV LNEKRDIIFLSDETAYIGAGTDEQGNPLVYYTEDDGNTYTTLTIPAHEVEILGSSFKPFV QMEYVYQERGITYMIVAQGTDGDYMKNNALVKGRYKSKDGINFTFDKEISDSPTLAG >gi|312956108|gb|AENW01000019.1| GENE 139 140591 - 140830 241 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKAYIRYGSIALMIASLILTGYQMTCGAVLFIFYNDNKTALLYLLRGGLAALIFLLLFYQ KELKQLYLKHKANTSGSLE >gi|312956108|gb|AENW01000019.1| GENE 140 140964 - 142022 1090 352 aa, chain - ## HITS:1 COG:CAC0760 KEGG:ns NR:ns ## COG: CAC0760 COG3945 # Protein_GI_number: 15894047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 193 331 10 154 184 84 34.0 3e-16 MSKRLGGIHQLLYKRICFLSEWNEALCSALHREQKHRCHRLQLTDLIDETNIHESLQEIM KEVQREHAALSERLVHAQGKEAAAQVIAGFGQRHTVDGDLTQLLKQIEALFLHGMPCERN LIMEVQDDTHARIVWKNDSQLQYYQNPSLWLWEREQLLQKMLPAGYVYEEYAKEAVLYKD AVSRTWVEQLEYEHEMISHLLAAMQEYSLSILRTKQVDREWLKNCLDYLQEYADVFHHQK EEELVFSRLKQASPQGKLLVEQGMLVEHDLARYYIRSMKKLLKKDVTEKVCVRLIGFIQA YIDLLERHIEKENSVAYPYAVRKLAMDEIQKAFDAHGQYERMEELREFLKLS >gi|312956108|gb|AENW01000019.1| GENE 141 142015 - 143736 1838 573 aa, chain - ## HITS:1 COG:CAC2750 KEGG:ns NR:ns ## COG: CAC2750 COG1151 # Protein_GI_number: 15896007 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Clostridium acetobutylicum # 4 503 3 527 530 605 57.0 1e-172 MEEMFCFQCQETMNETACTVQGMCGKSAACANLQDALIRASQYAALYDTASDEQLMNNLF MTITNANFSTADIRRAIEKTYTGKSVEELTREGCLKNRKETVRSLQELILYGLKGLCAYL SHAAVLGFRKAELSSFVRSTLVYLLEDHEQKEYLTLLDKTGEMGVQAMALLDEANTATYG QPEITTVSLETGSRPGILVSGHDLHDLKELLEQSRSQGIDIYTHGEMLPAHSYPEFKKYE HFKGNYGNAWWRQNEEFEAFNGPILMTTNCIIPVKDSYRQRIFTTGVVGYDGLEHIEAVN GRKDFRCIIELAKHCPAPQQLETGSVTGGFAHAQVMALQDQIVEAVKNGDIRQFIVMAGC DGRHASRSYYTDFARALPKDTVILTAGCAKYRYLKLDLGMINGIPRVLDAGQCNDSYSLV LIAEALKEAFGLQDINELPILYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPEV VQWLKESYGIKTIQEVEKDMENFGITKREPSYGDMTMAELLKLDEGMEDVLYEAGFHCLG CPSAQLESLRDACELHALNVDEVCAAIREYRHE >gi|312956108|gb|AENW01000019.1| GENE 142 143738 - 144040 399 100 aa, chain - ## HITS:1 COG:no KEGG:NT05HA_0241 NR:ns ## KEGG: NT05HA_0241 # Name: not_defined # Def: cupin 2, conserved barrel # Organism: A.aphrophilus # Pathway: not_defined # 6 94 13 103 112 68 40.0 9e-11 MKTETIQEMAGMQDGAIVSKVLTQNGSTTLFALAQGEEIQEHTSTRAALAIVLEGRIIFT VDGEEKEIQGMEAVHLPASVVHALRADTNSRMLLIQKGER >gi|312956108|gb|AENW01000019.1| GENE 143 144101 - 144691 720 196 aa, chain - ## HITS:1 COG:no KEGG:Ddes_1827 NR:ns ## KEGG: Ddes_1827 # Name: not_defined # Def: transcriptional regulator, Crp/Fnr family # Organism: D.desulfuricans_ATCC27774 # Pathway: not_defined # 1 184 5 205 229 110 36.0 2e-23 MKQMHILDQMKPEEVAELKAQSVTKTFQRREIIFHKEDTPKYLYVLLEGAVCVFDDTPDG TRNILTIIREPMDCFAEVYLFIDEKLPFSAEAMKKSTVLMIPRSVLHRFPRISRNLNVML SQKAYTLSQKLKLLMKDSLREKIMEYMQQHPDVLLKRHELASFLGVSRPALSRELYRMVD DGLLVLDEHGNFKTVI >gi|312956108|gb|AENW01000019.1| GENE 144 144715 - 145566 722 283 aa, chain - ## HITS:1 COG:BS_dppA KEGG:ns NR:ns ## COG: BS_dppA COG2362 # Protein_GI_number: 16078357 # Func_class: E Amino acid transport and metabolism # Function: D-aminopeptidase # Organism: Bacillus subtilis # 10 270 2 258 274 130 33.0 2e-30 MNKQEAAMKKLYISADIEGIWGNGAFAHTAKNGTEYEEYRTNMISEVNLLIDKLFTAGAE EVVVNDGHGNMDNLSASRLDPRACMVVSNGAYKEYGMMEGLDDTFDGVCFVGYHCRSNTR GVMAHTIWGTLVRSIRVDGEEMGESGINARLAWEYGVPIVLISGDDLLKEQLKEELPMPF AYVETKRAISSQCALSCSWQMLEERYERAVSSMEAHCGQAPVYAKKPHCVDITFHHERNA DFVSRMDGVTRISDCTVRIQKDSYDEVYRYLRFVIKISNAFAA >gi|312956108|gb|AENW01000019.1| GENE 145 145559 - 145879 413 106 aa, chain - ## HITS:1 COG:BH3997 KEGG:ns NR:ns ## COG: BH3997 COG1694 # Protein_GI_number: 15616559 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Bacillus halodurans # 1 92 4 99 101 73 42.0 1e-13 METAIERVRAFVKDRDWDQFHTPDNLAKSICIEAGELLECFQWDPEKYEHRAVCEELADV MIYCMQLADKLQVNMEDIILDKMEKNEKKYPVEKARGNAAKYDAYE >gi|312956108|gb|AENW01000019.1| GENE 146 146047 - 146373 168 108 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLYLTDFNQNATLIPIFMHGLAISIMLTVGTLSMLKKKKVCDKRYFIWGRMNHIACAVL LIWIITTKGYGRPLEFLFLISFVLLLYLLLLITLIVNCLKIRHRGSAS >gi|312956108|gb|AENW01000019.1| GENE 147 146684 - 146839 164 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399764|ref|ZP_06643910.1| ## NR: gi|293399764|ref|ZP_06643910.1| putative PHP domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 50 451 500 501 64 58.0 2e-09 MASLLKLATDRKLLVSAGSGFYNMEGNTRIGRCNCPKEAEGLIDMMLHARM >gi|312956108|gb|AENW01000019.1| GENE 148 147544 - 147942 168 132 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKIFVCFFTLVVALTTTLSISATQWSSKETLNVPAWGAWSERTKTSTKKNKACDYGYIH LYSNNTGWTTYGDFYFHGERRSNSYYSLAEGYDKRIYYLNGYKSKDWWIGARVSSSNVNF GGQVSINFTPTN >gi|312956108|gb|AENW01000019.1| GENE 149 148788 - 149303 -83 171 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLRNYIVSLKSKYILLYILSILIFFLFLYESDSKIGFISYIGNNYLPLVTCSIFFSFNYW RANCLYAMKYHIFLRIKENKLVTQILCIEFLNSLIFIIITYILPFYNQLAYMPKIYMLYL INISILYLMISCLNTAALFVGKRITKILLMAPFLLMFVFHYLIMLPILEKL >gi|312956108|gb|AENW01000019.1| GENE 150 149317 - 149925 195 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 179 1 198 245 79 27 8e-14 MIQLVNISIAFHNVSILRNVNMDIHRGDLIHITGSNGSGKSTLLKIIAGLLNADKGEVII ENNDIEIGALIENPAFIENESAEYNLKFLYDLKNSYDRKTVQSYMEYFDLTLEDKRAVKK YSVGMRQKLGIIQAIMENQNIILFDEPTRGLDNTSSNKFIELVKKLNSDKKTIIICAHDG VDEIPFNRKFTIDKEQLYECID >gi|312956108|gb|AENW01000019.1| GENE 151 149909 - 150415 65 168 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVLIRKHKYLLAYSLLFPISYLLLNYNKIFFNQVVYGMPTNILMICLTCLFLLFEILYL FDTTFDFMNLKYEIEIRKPNLLRDLIIKKSLISDIFLAVIQLISCYLFSHHIYIGFIMID KAGLLFIYLLLLKIKTTNDKKVDSIIIFIFMIILHLCIEYLYGLLTIF >gi|312956108|gb|AENW01000019.1| GENE 152 150571 - 150732 67 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLSVLVTIKSRLSTGLLPISDLNLYEKSHYNHYVILLFIMSLYPYEPLKVKY >gi|312956108|gb|AENW01000019.1| GENE 153 150762 - 152246 1567 494 aa, chain - ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 209 468 13 253 266 97 29.0 6e-20 MKKMRKTPEKQYQLAVDGIRPLNVQDSKDRLLAFCMDVSIMLCPIALWNIILLAVLGNII SISGIKLISIFIGGLLVISILFLNSYIYRQTGGQSVGMRMFGFKVVKKSGRKASRQQLLL RELVGFDLPFIILMYFTNAFGVVAYWGLNGLFTLADSRHRSLIDLVLGTRVVALEKAQQP VQKEKAPQAVKQPLPKQAEQPELIMNTMDLHIHSNFSDRGQYNVEEIFQYAKRNHIRTVS ITDLDCAKANSIAVRMSELYGVTYIPGIEINCDLRGRRVRILGYFIQYNSELFAHIENES LVNEKRASIDRVRRFEALLGRNIDEERLLKSNRFQRLSGELIAKHVLNRPEFDDCAILKP YRRDEFGWRALNKDYFAYGKPCYVPVKYPYLKDVLDVIELTGGISVLAHPGKLLVQEPEL LDEALLMGVQGIEVFHPMHTKKEMASLLKLATDRKLLVSAGSGFYNMEGNTRIGRCNCPK EAEGLIDMMLHARM >gi|312956108|gb|AENW01000019.1| GENE 154 152251 - 152562 194 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399765|ref|ZP_06643911.1| ## NR: gi|293399765|ref|ZP_06643911.1| hypothetical protein HMPREF0863_00048 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 101 1 101 104 119 59.0 6e-26 MKIFTCEKCGTSIKLHFIKGYVHLRCPACGAEYQLDTGSLKKYMLIPLLSVAAAVGTSLR FLQGRTIDIKCIYILTVSFMLSGLLGTLCVKTGLLTYEEKENR >gi|312956108|gb|AENW01000019.1| GENE 155 152927 - 153622 639 231 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399766|ref|ZP_06643912.1| ## NR: gi|293399766|ref|ZP_06643912.1| VanZ like family protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 216 1 217 233 151 43.0 3e-35 MSMKYKKELSYVCLGISITAMLLYFYLTIENYLNFSGIVMFSVLICSTLILGVCLQNRLY DTQKQTRNLRLMWIVLFSFYIFQMIYILFFASEFARDYVDLRSQSYPDSLRMQWEYGTSL KPFATIHQMMAIFDMPYVDNRIAVMNLLGNFVAFMPFSFFLLLLTDWAKRPVKLLLRMAF IIIMVEILQFFTLSGTMDIDDFILNFSGVLLSYIILRFTPLYKSLSVFLKK >gi|312956108|gb|AENW01000019.1| GENE 156 153887 - 154816 774 309 aa, chain + ## HITS:1 COG:no KEGG:BT_3685 NR:ns ## KEGG: BT_3685 # Name: not_defined # Def: hypothetical protein # Organism: B.thetaiotaomicron # Pathway: not_defined # 6 296 32 332 355 264 44.0 3e-69 MKNKTLWTDTEGKPIQAHGGMILQHKGIYYWYGENKDTETVNRHVDFIGISCYSSEDLEN WRNEGIVLSPVVNNPAHMLYTKNICERPRVLYNKSTKQFVMYTHADTADYYYAGVNVAVA ASPTGPFVWLKSFQPNRQDSRDMTLFQDLDGSAWLIHSANYNKTMNIARLSDDYLDVTGS YISIFQDQEREAPAIMYSHNRYYMITSGCSGWEPNPSLYGICDHLIGPWKLIDNPCTGPA YRTTFDGQGTCIFFVQNQPYVLLDHWHPDDLRSSAYSMLPIQILDNGGLKIEWQDETFFT NSKRREGTS >gi|312956108|gb|AENW01000019.1| GENE 157 154842 - 155237 351 131 aa, chain - ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 104 1 105 144 69 35.0 2e-12 MTGLIICGHGDFAAGMYSSLKLLNGECEHLVCISFQEGTSFEDLCDTVNKEVERFIDGNV IILTDLPGGSPFKAAAMATFQYGYARAVTGTNFPLLLDLVLSRDYAEDVDQLLDQSIDNA REALMKMSLEQ >gi|312956108|gb|AENW01000019.1| GENE 158 155237 - 156037 840 266 aa, chain - ## HITS:1 COG:MJ1115 KEGG:ns NR:ns ## COG: MJ1115 COG0434 # Protein_GI_number: 15669302 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Methanococcus jannaschii # 1 259 4 259 261 133 34.0 4e-31 MFKPDCTAFAMIQPSALPGSYRHEDKTIDDIVAEVLEETQMIVDNGFDGVILQNMNDMPI KQNAAPEAIAYMTRIAYEIKHQYPQLILGVLVNWDGVASLAVADAVHADFVRVEHLFTGA NVTSAGILEGQCVEIAALRKRIRSKVPVYADIQEVHGIPLGGKPIDDAAWEAVHEAFADG LFVSGKSKEESLEMIHAVRKKLPDTPVILGGGANGENIEELLQYYDGVSVATWVKNGNMK NPIDPKRAEIFMSSVQKAREKKRGRS >gi|312956108|gb|AENW01000019.1| GENE 159 156030 - 157016 704 328 aa, chain - ## HITS:1 COG:no KEGG:Tagg_0676 NR:ns ## KEGG: Tagg_0676 # Name: not_defined # Def: initiation factor 2B-like protein # Organism: T.aggregans # Pathway: not_defined # 101 255 91 244 330 69 30.0 2e-10 MYTVNLEKARKALPAAAVKDFDDIVEQRVLGASKHIQMIGKMIEQIAVDSVETNRTIAEM LERIQEVCQFFIHTRGEASQAITNAVYLMTAGYRQHEERDIRTYAQRIIDVKKQYERDCT AASETAVSYAVEIGNRMSAIMVYDYSSSVEAFLRKINGPKRIYIPESRVINGGAPFVQPC LEAGHQIHFIPDASMMYYMKSCDGVFMGAESIYPDGTGFNTTGSDIVGLLCDYFHVPLYF ISPLIKLDVRPVYGKEKCTVINDLRSKLEPVANPKQVKGTIDYTAPELLAVSPGFIKAFI TEQGVIPATQLYDISMKYIKELRGADDV >gi|312956108|gb|AENW01000019.1| GENE 160 157026 - 157742 554 238 aa, chain - ## HITS:1 COG:PAB0058 KEGG:ns NR:ns ## COG: PAB0058 COG2159 # Protein_GI_number: 14520316 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Pyrococcus abyssi # 2 203 17 210 248 103 30.0 3e-22 MIDIHSHLKTDSGEGSVQKLLQDMDRFHINRRVISDMRYDDVQDGNQKIAELVKEYPERL IGCAVLNPALSTILEDTRHACSLKEIRMIEFDSYRHGYAPDDCPVLDDVFAMLQERGLPV KVFSGIGAKALPHQWESYTRRYPQIPFIYLHMGCFDYGYSCVDIVKRNKNAYVETSNQYE MQILKKAFRQLREEQIVFGTTYPQRFTKNAVEVFDLFDLKEDQLQMFTDGNGKRLLQM >gi|312956108|gb|AENW01000019.1| GENE 161 157755 - 158570 1020 271 aa, chain - ## HITS:1 COG:lin2108 KEGG:ns NR:ns ## COG: lin2108 COG3716 # Protein_GI_number: 16801174 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 6 270 9 272 273 197 39.0 1e-50 MEAKKLTKKDLWKVFRGQLTIRGANNYERQQNAGFTQAMMPVIEKVYDNDEDKREAYERH MEYFLTNDITSAIPVGIAAAMEEMHANDPDMDPNAINAVKTALMGPLAGLGDSLLNGTAR PILASLAISLVHANLGWVGPIFFVIGMSIVSLGIRYLGVFQGYKQGIKLVEKINSSGLIS KITDIAAIAAYTIVGGFIPALVVMNIPIEIKSGETVINIQKTLDGLMPGVLGLAYTFLMY YLVTKKKNSAVKLIFFTMVFAILAVYAGILG >gi|312956108|gb|AENW01000019.1| GENE 162 158575 - 159324 867 249 aa, chain - ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 4 222 5 221 259 125 36.0 7e-29 MSLFLQAFLVALAVTIAFIDAHTTQTHIFRPIFIGPLVGAIMGDFNTGLQVGVTVELMFL AVIFVGTAVPPNPTISTAIATAVAILGGGGTDLAVATALPVSFIGQIAETVQNSVINVWF MHRAEHAIEKLDTRGLVMNNIVFTMAMNALLYGVPTFLAVYFGADFVADIIKAIPDKIIT GLSVGGNMVGAVGFALLLSSIKNHTMWPFLFLGFFFAAYLQINMVGIALLAVVFAALYYY FKLADEGKE >gi|312956108|gb|AENW01000019.1| GENE 163 159346 - 159813 588 155 aa, chain - ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 3 155 6 160 162 88 34.0 5e-18 MNITTFRIDDRLIHGQVVTAWIAHSDAKQILVADDAAAKDTLQQSLLKMATPKKVDLKIM SLEDAKQLIQNDESDTKTLLLVRGPKQALYLIDSCSDVKSINVGNINMKKGKRKILGNCW LNDEEEKDIRLLAEKVEVEVRAVPNEHKQILVNLL >gi|312956108|gb|AENW01000019.1| GENE 164 159810 - 160556 568 248 aa, chain - ## HITS:1 COG:PH0093 KEGG:ns NR:ns ## COG: PH0093 COG2159 # Protein_GI_number: 14590044 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Pyrococcus horikoshii # 20 239 34 246 247 96 31.0 4e-20 MKYYDIHSHLGKTSSGDENTPSELVTDLKRYGIEKVGISCLSGISTREQNDLIYRAMQEY PEVIEGYAFINPKDAAAENEIDLCLGTYGMSAVKFHSWKHGYYPDNSGSLDRLLDKIDSY GVHVQTHVGTAPISNPYVWAEYAKKHPHVRFVFTHIGYYEFGMSTIEAVKDLPNVWVETS GQMDVEVLKKAIAVLGSKRVCFGTDWPYKPVNMEISKFYELELTEEQRADIFYRNAEKLW KRVREEQI >gi|312956108|gb|AENW01000019.1| GENE 165 160955 - 161686 456 243 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 240 2 240 240 114 31.0 1e-25 MQKKEGAPLYLQIYKELQKRIENGVYKENELLPSEASLQAEFNVSRITIRRSLQDLELAG FIKVQKGKGAMVLANRKYTDLVGVSSFSQDAMKSGERPSSIILEFEELKASGIVCDYLQL QEGADIYRLKRLRLKNGRIIGMNEQFISRQTGFELHADVLNEKTSIYALYEEQGLHIERA VESIEAVMPSTALRKELYMNEGEPLFRRERITYDYKNRPLELSINSYKADEYKYIITLKK DEL >gi|312956108|gb|AENW01000019.1| GENE 166 161998 - 162957 965 319 aa, chain - ## HITS:1 COG:STM2340 KEGG:ns NR:ns ## COG: STM2340 COG3958 # Protein_GI_number: 16765667 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Salmonella typhimurium LT2 # 1 318 1 317 317 273 43.0 2e-73 MFTLSKDRSKKGKELRMVVVETLQDMMKSDAQVVAMEADLGGASGFTKIQKSNPDRFIQC GISEANMTGVAAGLSVTGFKPYLHTFGPFASRRIYDQIFLSGAYAGNTMNIYGSDPGFTA GPNGGTHTTWEDVALMRAIPHAVVCDAADEVQLDWIIREFARMEGVHYIRANRKDVRNVY EKGSTFEMGKGNIVREGSDVLIISAGQLVSDALDCAEVLSKQGISVEVIDMFCIKPLDEE LIIREAAGKKAVVTFENHSIIGGLGSAVAEVLAENNISVKFKRHGVKERFGAVGTPEFLQ KEFRLTAEDLLQTVENTLK >gi|312956108|gb|AENW01000019.1| GENE 167 162959 - 163813 1027 284 aa, chain - ## HITS:1 COG:SP2128 KEGG:ns NR:ns ## COG: SP2128 COG3959 # Protein_GI_number: 15901942 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Streptococcus pneumoniae TIGR4 # 9 263 11 266 285 293 55.0 3e-79 METSQLKELQVFAAQLRMDILEMLEHRGYGHLGGSLSIVELMSVLYGKQLHVDPKNPKME DRDMVVLSKGHAGPAWYCALAEKGFFDKEWLMTLNDGGTRLPSHPDRTKTPGVDMTTGSL GQGTSAAAGIATGLRMKGSSRYVYMIVGDGELNEGQCWEAFQYVAHYKLNNCIVIIDDNK RQLDGYTKDVMNPFSIPDKMKAFGFDVQVVKGNDIEAIDAAIEQAKAVKDQAVCIVLDTI KGQGVPYFEEMVSNHSVKFNSDEVINETHKAIADLKQFIEKEGQ >gi|312956108|gb|AENW01000019.1| GENE 168 163992 - 164270 172 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15901944|ref|NP_346548.1| PTS system, IIB component, putative [Streptococcus pneumoniae TIGR4] # 10 92 8 93 94 70 44 4e-11 MEIRSIMCCCGQGLGSSMIVSMNVEKALKKLGVSGVKVEHTAIGEVTEGSADLFVIGADL APQMTSYKNKIILNQLMDMNEIETKLKEVFGL >gi|312956108|gb|AENW01000019.1| GENE 169 164296 - 165720 1492 474 aa, chain - ## HITS:1 COG:STM2342 KEGG:ns NR:ns ## COG: STM2342 COG3037 # Protein_GI_number: 16765669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 2 474 7 454 463 400 52.0 1e-111 MLEFIINILSTPAILVGLMSLLGLALQRKPIEDIVKGTVKTIVGFLVLSAGASFLQSGSL NAFGDLFNYAFSMQGVVPNNEAIVSLALKDFATDTAYIMCLGMVFNIIMARFSRMHYIFL TGHHTLYMACMLAVILNVGGLTSWQLWLGGGLLLGFIMAFSPAFCQPTMRKITKTDELGF GHFGGAGYWFAAQCGKLFKGKGKSTEEVNFPQRLTFLRDTTVAIGLTMVIFFLIVTTVAV SKGILSADAAAILEKYPNLAGLLNVGAETKTHWAVWAITSGLSFAGGVYIILSGVRLIVG EIVPAFRGIAEKLVPGAVPAIDCPVVFPYAPNAVLIGFLVSFLGGIVGLFILGFIDTNLM SVALILPGVIPHFFCGATAGVFGNAEGGLKGCVFGSFMHGLLITFLPAICMPVMGSLNFA NCTFSDADFSWMGIVFGNIAQVVQGVGLLGVCAVVFLIPIVYNYVAPKKAKKAE >gi|312956108|gb|AENW01000019.1| GENE 170 165753 - 166202 537 149 aa, chain - ## HITS:1 COG:YPO2569 KEGG:ns NR:ns ## COG: YPO2569 COG1762 # Protein_GI_number: 16122787 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Yersinia pestis # 1 141 2 143 147 104 35.0 6e-23 MEKLLQEKNCYLRDRVQDWKEAVHIACEPLIEQNYCTTAYEAAIYEITERLGPYYVLCEN LALIHASNQSGVNDTQMAVTVLKESVKFKPDGYDVRVLVTLVAKDSESHMEGIQAVSNIF SDEKKVQEILDATCPKEIFDLFVSNACEK >gi|312956108|gb|AENW01000019.1| GENE 171 166332 - 168365 2247 677 aa, chain - ## HITS:1 COG:BH0220_1 KEGG:ns NR:ns ## COG: BH0220_1 COG3711 # Protein_GI_number: 15612783 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 5 472 1 498 556 224 29.0 4e-58 MNIMLNLDKRCQEILKRLMYAGGYLKIQDLADEMQISRRSVYYDITKINEWLEDQEIDPL VQERGKGIFVSSEQSRRIQEAMSDQGSDNYHVFTPDERNRIEICAIIIRSHPLYIENFME VCQVSRNTVINDLKNVIRFLENYNLELTYDIKSGYRIAGDTIKKRAIFFMLFPSLWEYYD RQVVLVENEQYIREILVKLKKIESELHAEYVSGVLPTLAVFMSAIDKRSDQLTFSDMDEE EIVETKEYQLVSQYFPDLENGEKIYVTLHLLGSRLQTIPVNVMKEQDETYEISKNLVHEF ERLTCIFFDQEEELVDAINAHLKTSLYRYRYGIQLGNPMLNSIKTEYEELYEITKKSCEY LEKKLGCLISDAEVAYITLHFGAFLTTNQTQKRNLRILIICPNGIGTGNMLRNEVASLVP QATEIVNLPLSQYEENHDFDVVISTVVLPKEKKLIVVHPILTDQDRVTILRNCMYTEPQA NLQIQEIVRLATSYIPSSKLDEFEKDLQDYYSSIQIRTVPHRNFGQNLVYYLKPSHIQIC REDCDWEEALRLSCRPLLMEDSITQEYVEAIVEDQRNRGLMMFLADGLVLAHAAIEKGVK QLDVALCTFKHPVTFLNGKQARIIIVLCAEDQTKHIRILNDVLNIFSKKKSIEQLAALES SEDIQSYIRAHTQENEG >gi|312956108|gb|AENW01000019.1| GENE 172 168393 - 168539 114 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGILQYLLGLQYSYQKNRRQMELYLNKARVNLKGTPYHKKVKQLLNKA >gi|312956108|gb|AENW01000019.1| GENE 173 168464 - 169063 371 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|218283690|ref|ZP_03489651.1| ## NR: gi|218283690|ref|ZP_03489651.1| hypothetical protein EUBIFOR_02245 [Eubacterium biforme DSM 3989] # 6 156 7 157 225 79 27.0 1e-13 MNKIMLLVLLTIIMIAVAVPFVIRSLLWNRVLKLLHNGQYDKVLIMLNSKAFQLFFKEYD RNWNTLRVYLAQGNNRKIEEQTKKLLDSRLTSAQAYQIASQTYFYFLDRENRDVCERLLS YIEKSAGEEELLYDRMLFRIMIEKKSEDIAEMEALLEKKEAEKIKKIKSRISRYRWVFYN ICLDCSIPTRKTADRWSCI >gi|312956108|gb|AENW01000019.1| GENE 174 169364 - 170233 706 289 aa, chain - ## HITS:1 COG:CAC0827 KEGG:ns NR:ns ## COG: CAC0827 COG0191 # Protein_GI_number: 15894114 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Clostridium acetobutylicum # 3 288 2 287 287 373 69.0 1e-103 MALVSATEMLNKAHEGHYAVGAFNINNLEWTKMILLAAEEAKSPVMLGVSEGAAKYMCGF KTVVAMVKEVHDSLGITVPVALHLDHGSYEGAKACIEAGFTSVMFDGSHYAFEENLAKSK EMIELAHSKGLSIECEVGGIGGEEDGVASMGELADPQECKTIAELGVDFLAAGIGNIHGK YPADWAGLNFERLGEIQDVTNGKPLVLHGGSGIPADQIAKAISLGVSKINVNTELQLVFA DATRKYVEAGKDLEGKGYDPRKLLKPGCDAIKDKVTSMMKEFGSYGKAE >gi|312956108|gb|AENW01000019.1| GENE 175 170398 - 170544 65 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTRKTMLQKQGMKNSKKDASPFFMPLSRYQHVLWKHSSILLLENQGR >gi|312956108|gb|AENW01000019.1| GENE 176 170495 - 170815 372 106 aa, chain - ## HITS:1 COG:no KEGG:BcerKBAB4_5137 NR:ns ## KEGG: BcerKBAB4_5137 # Name: not_defined # Def: DNA-directed RNA polymerase subunit delta # Organism: B.weihenstephanensis # Pathway: Purine metabolism [PATH:bwe00230]; Pyrimidine metabolism [PATH:bwe00240]; Metabolic pathways [PATH:bwe01100]; RNA polymerase [PATH:bwe03020] # 4 93 15 111 175 67 36.0 1e-10 MKKSMVDVAYDLMSTKKKAIVFLKLWEEVCQVMAFTKQQEEDNIAQFYSDLSLDDRFVNV GENKWDLRERHTYHEVVVDTEEILIDEEADDDYEEDDAAKAGDEEF >gi|312956108|gb|AENW01000019.1| GENE 177 170834 - 170956 62 40 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399769|ref|ZP_06643915.1| ## NR: gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 40 516 555 555 68 82.0 2e-10 KVIDPQQPKLSSQRLALLKATKITLKNALYLIGVDAIEKM Prediction of potential genes in microbial genomes Time: Sat May 14 02:13:24 2011 Seq name: gi|312956088|gb|AENW01000020.1| Clostridium sp. HGF2 contig00014, whole genome shotgun sequence Length of sequence - 18150 bp Number of predicted genes - 16, with homology - 14 Number of transcription units - 9, operones - 5 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 411 - 470 4.3 1 1 Tu 1 . + CDS 659 - 1738 860 ## gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 + Term 1764 - 1795 1.1 + Prom 2339 - 2398 8.1 2 2 Tu 1 . + CDS 2502 - 4319 2258 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 4403 - 4435 1.6 - Term 4532 - 4575 5.8 3 3 Op 1 . - CDS 4580 - 5008 144 ## 4 3 Op 2 . - CDS 5009 - 5659 741 ## COG1994 Zn-dependent proteases - Prom 5679 - 5738 5.8 - Term 5787 - 5819 1.6 5 4 Op 1 36/0.000 - CDS 5829 - 7799 1856 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 6 4 Op 2 4/0.000 - CDS 7786 - 8550 966 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 8571 - 8630 3.8 7 4 Op 3 40/0.000 - CDS 8641 - 9636 951 ## COG0642 Signal transduction histidine kinase 8 4 Op 4 . - CDS 9633 - 10295 792 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 10399 - 10458 7.3 - Term 10420 - 10455 3.7 9 5 Tu 1 . - CDS 10469 - 11026 568 ## gi|293400308|ref|ZP_06644454.1| acetobutylicum phosphotransbutyrylase - Prom 11125 - 11184 5.5 - Term 11259 - 11320 9.8 10 6 Op 1 13/0.000 - CDS 11356 - 12102 806 ## COG0149 Triosephosphate isomerase 11 6 Op 2 . - CDS 12130 - 13308 1326 ## COG0126 3-phosphoglycerate kinase - Prom 13331 - 13390 6.5 + Prom 13264 - 13323 6.2 12 7 Tu 1 . + CDS 13508 - 15088 1821 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain + Term 15103 - 15136 -0.4 + Prom 15107 - 15166 5.9 13 8 Op 1 . + CDS 15198 - 15467 263 ## CDR20291_1621 hypothetical protein 14 8 Op 2 . + CDS 15467 - 15835 379 ## COG2315 Uncharacterized protein conserved in bacteria + Term 15842 - 15876 2.2 - Term 16056 - 16103 8.8 15 9 Op 1 . - CDS 16109 - 16339 137 ## - Prom 16386 - 16445 7.5 - Term 16447 - 16493 -0.7 16 9 Op 2 . - CDS 16513 - 18027 1768 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 18089 - 18148 8.7 Predicted protein(s) >gi|312956088|gb|AENW01000020.1| GENE 1 659 - 1738 860 359 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914792|ref|ZP_02077006.1| ## NR: gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 [Eubacterium dolichum DSM 3991] # 8 359 6 315 323 214 39.0 5e-54 MTTKMKTEAAAMISCYDNKKKYDMYCKKLLSNKQILAYVMKGCIPEYADIPLEDIPSYIE MSSINTAECECIDDYQVEVTDEAIPGAQIKYDIQFEATIPMKQKVTDKSTPAEKRLRMII NLESQAEDDPGYPLIKRALYYCSRLMARQKHPKDGFQHSDYGRIRKVCSIWICIGHNNQK NDVINTYKIQETCETKIWHAAKEDYDLLTAVMVYPKKEGVRKAQDIPNAVEQEDENKQRL LELLKILFIKNLAVEDKKEQLQKTYGILMEKEIDQEVMTMCNFSDFIEQRGIEKGLEQGM EKGLKKGLLQGKAEGKVEATLLHVKKLMQRINVSAVDAMNMLDVEEDIRPTILQSLQLS >gi|312956088|gb|AENW01000020.1| GENE 2 2502 - 4319 2258 605 aa, chain + ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 605 1 608 608 530 45.0 1e-150 MCGIIGYAGLCNISNSVLIEGLEALEYRGYDSAGVAVVHDGEVQVVKAKGKVSFLKEKME AVGLAGGQVGIAHTRWATHGEPSEINSHPHQSGNTTLVHNGIIENYNELKKELENAGYTF KSDTDSEIACAYIDYCYFLKKDKQQALACAYHHFRGSFAFAIIFADEADVIYAMRKNSPL VLGVASDKAFLASDISAFLKYTNKYLLLEHEEIARCSSEGIIIKTLDGDFVKRDILVTDL DIKDIQKDGFEHFMLKEIHEEPEVVKKTIDSLMQVDMKDLLNTMPNLAKYNDIHIVACGS AMYAGMIAKSLIETRARIHVDCVCASEYRYANPIFTDKTLVILVSQSGETADTIAALQLA KEHGVDTLAIVNVVGSTIAREASFVIYTKAGPEICVATTKAYCTQVAVLSLIACNLAYVH GNIDAEEAARITKELKDLPQHMQQLIDSDQYKAFAKKIYEHNDVFFIGRGLDYSLSMEGS LKLKEISYIHSEAYAAGELKHGTISLIEKGTPVIALATDEDLYEKTISNIKEVKARGAYV VLLISDDLDIASDYYDDVLVIPKVDKLIQGILTVIPLQLMAYEIARLRGCEIDQPRNLAK SVTVE >gi|312956088|gb|AENW01000020.1| GENE 3 4580 - 5008 144 142 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLLFHKASPQHAAPLTALQHVCTDFLLAKGIRQWTYMSEGDVIKELPFTYVLLSDHTVV ASFCIKPYEKDTAYATRIAVHPDYQGAGIGKAICTWLKGYEQPVYLDCWNGNEKLKSFYK ENGGHIIGVFPEADYEICVFCF >gi|312956088|gb|AENW01000020.1| GENE 4 5009 - 5659 741 216 aa, chain - ## HITS:1 COG:CAC2628 KEGG:ns NR:ns ## COG: CAC2628 COG1994 # Protein_GI_number: 15895886 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Clostridium acetobutylicum # 1 183 1 181 216 123 39.0 3e-28 MDIRGFFANLIYILPAVAIALSVHEFAHAFVSYKLGDISQKQRGRLTLNPLKHLDPFGTL SLIFFGFGWAKPVQVDPYFYRNKKDGMIWTAMAGPLMNFIVGFLMVILYMLFIRFGLLYK NEFTYYLFQVIGTTASINIGLGIFNLIPIPPLDGSKILMGILKEETYFKLMQYEMYLSFI MIFLLMSGVLDGPLIHAREAILDVFVKAASMITGLG >gi|312956088|gb|AENW01000020.1| GENE 5 5829 - 7799 1856 656 aa, chain - ## HITS:1 COG:CAC0227 KEGG:ns NR:ns ## COG: CAC0227 COG0577 # Protein_GI_number: 15893519 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 655 1 634 634 135 22.0 4e-31 MLYVKLALRNLKRSLKEYSIYVFTVTITMTLLYAFFAIAFSGEMQDLVTTYDNVKSIMIM VSILVTLIIAWLIYYISNFILQKRSREFGMYLLLGMKRTQVSRMFLFEQLALGAVGFFIG CVLGIFVYEILHAILLNIFGFAYAFQLSFSWSACGAAFLCFLSIYLLEMIREGIALKKQS IHTMLYNASRNEKTAKGSRLSGFYFLAAVLLAVAGLYVTQQYLRSMVNGQSSDSMLLMLG VFAIIVSVYLFFYGISAVLGIFLNRHRKIKYKGNCMYLYGQIAGRLRSNRTVLATLSLLT LLTLLFLCIALKFNEVKELSNARFVPFDIMASSSEKLNMKSIESYLQEHKISYQSADIHY YQKEERDDFYSVVKGKSYYTEDEKHSVYMKQSDFNKLRSLKGKPSVTLKADEYLIVCATD IKDSLQEYGAQHTLHLQGKRLQLRGVDDTEYGQTRNSGYYLIVADEHVKHAKPYFREWVA NTDPETEVSWYQDTVNQFFDDNKEQVGDSFYSYASYRVKAKWFEENAVGFVSICFSLFYL SFIFICISATILAVQQLSDAHRQRYSYAMLHKMGVNQRQLHALLAKQIAVYFIIPLVLPI VYLLPIIRMLDELFEMTYASANMFIYLGGSMLFFLAVYGCYYVMAYLGCKRNIDQM >gi|312956088|gb|AENW01000020.1| GENE 6 7786 - 8550 966 254 aa, chain - ## HITS:1 COG:lin2219 KEGG:ns NR:ns ## COG: lin2219 COG1136 # Protein_GI_number: 16801284 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Listeria innocua # 2 253 3 254 255 273 52.0 3e-73 MSVVIVSHVEKFYGNQGNITQALNDISFAVEKQEFTAVMGASGSGKTTLLNVISTIDAVS AGNIEINGNSICELRENELAEFRKKELGFIFQDFNLLDTLTLQENIALPLTLLKKRAEQI DPQVNALAEILQIQDILEKYPYQVSGGQRQRCACARAMIHDPSLILADEPTGALDSHSSY LLMEQFQRMNTELQATILMVTHDAFSASYAKRVLFLKDGTIFNEIYRGSLTRKAFFQKIL DVMQLLGGDVHAVR >gi|312956088|gb|AENW01000020.1| GENE 7 8641 - 9636 951 331 aa, chain - ## HITS:1 COG:CAC0225 KEGG:ns NR:ns ## COG: CAC0225 COG0642 # Protein_GI_number: 15893517 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 328 1 327 339 166 33.0 4e-41 MKLHEYLEDHGILMAGMLLVFLLQCVLLVFLGMPAGLAILLCGMWLLFFLLYFIQDYHRK NRRRKELCAIIDSMEKRYLMHEMLPKGANHEEAFYRRLLYLGNKSMLEEIGTVQRSRREY QDYVEQWVHEIKTPIAAMKLSIENQQGERKRQLFQQLERVEHYVEQVLFYARSESVEKDF RIQQVSLSSCIQEALLQCKYLCTQASMSIRFPEQDALVYTDEKWLIFLLNQLIENAVKYR RKKGAVLSLAIQKDARHVVLTVKDNGIGIPEHDLPRIFDKGFTGDNGRLIHSHSTGIGLY LCKKLCTSLQIDLHADSDQEGTVMSLEFSHV >gi|312956088|gb|AENW01000020.1| GENE 8 9633 - 10295 792 220 aa, chain - ## HITS:1 COG:SP1633 KEGG:ns NR:ns ## COG: SP1633 COG0745 # Protein_GI_number: 15901469 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 218 1 220 225 186 42.0 3e-47 MYTILIIEDDEAICRELQMLLQKQGYEAICWNMQEDIRELVKTHDPHIILLDINLPQMDG FTVCSQLRSFSKVPIIFVTSRNTDMDELCSMQMGGDDFITKPYNTSILLARIAALLKRSY EWKDQNLTHHGVLLDVAMSRIEYQNNTRELTKNEVKILHYMFQHKGEIIPREDLIDYLWD NKLFIDDNALSVNVTRIRNKLRELGVEDFIVTRHRQGYQI >gi|312956088|gb|AENW01000020.1| GENE 9 10469 - 11026 568 185 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400308|ref|ZP_06644454.1| ## NR: gi|293400308|ref|ZP_06644454.1| acetobutylicum phosphotransbutyrylase [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 180 5 184 190 287 79.0 2e-76 MKKKKNMGIRILCALIFLGVCGSVMFAIYSLSAEDGQMSNARSEIVTEKIKEQVNTRLET TEEGIALSERIKYFVILHSPYGSDWNANIRKLAHFSIYFTLAAGIYITLAILGVNKFWRF LLTVGICFCFAFGDEYHQKFTGRTSSMSDVYLDTFGALVSTCIWTVISIIYSGIHLLVNK AYGDA >gi|312956088|gb|AENW01000020.1| GENE 10 11356 - 12102 806 248 aa, chain - ## HITS:1 COG:SP1574 KEGG:ns NR:ns ## COG: SP1574 COG0149 # Protein_GI_number: 15901416 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 2 248 3 252 252 246 51.0 3e-65 MRKPIIVGNWKMNKTMKETKEFMEAVDAAAASENAVFGIGAPYTALSAAVAGAKNLVIAA ENCHWEDSGAFTGEISVPMLQEVGVTHCIIGHSERREMFNDTDETVNKKAKRLIDAGITP ILCIGETEAQYDAGDSEKVIRDQLTGSLADMCPKCVGNMVIAYEPIWAIGTGKSASVEIA ENCCRIVRDQVRVMYGDEAAENVRVQYGGSVKPNNIVEYMAQPDIDGALIGGASLKADSF IEIIEKTK >gi|312956088|gb|AENW01000020.1| GENE 11 12130 - 13308 1326 392 aa, chain - ## HITS:1 COG:lin2552 KEGG:ns NR:ns ## COG: lin2552 COG0126 # Protein_GI_number: 16801614 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Listeria innocua # 1 392 1 396 396 491 65.0 1e-138 MAKRTVKDLDVAGKRVIVRCDFNVPRKDGKITNDNRIIQALPTIKYLVENNAKIILMSHL GKVKTEEDKAKNDLRCVAERLNELVDTKVTFVPVTRGEELENAVAALNDGEIVVMQNTRY EKGESKNDPELAAYWAKLGDLFVEDAFGSVHRAHASTAGIASILPNALGFLVEKEVKMLG AAVDTPERPFVAIIGGAKVSDKIAVVDNLLKKADKVLIGGGMAYTFLKAMGCNVGKSLVE EDKVELAKEYIEKAEGKLILPVDHVCADKFAEDANTVIADNDSIPADYMGLDIGPKSIEL YKEALTGAKTVVWNGPMGVFEMAPFAKGTLEVCTAISELPGATTVIGGGDSAAAAIQLGF AEKFSHISTGGGASLEYMEGKVLPGIAVIADK >gi|312956088|gb|AENW01000020.1| GENE 12 13508 - 15088 1821 526 aa, chain + ## HITS:1 COG:PA3702 KEGG:ns NR:ns ## COG: PA3702 COG3706 # Protein_GI_number: 15598897 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Pseudomonas aeruginosa # 347 521 155 333 347 106 37.0 1e-22 MDTIKETMQDLMDIIKRSKNSDMEEEYRCSVMLLNLGNQQQDSYALAFAHAYLADYYILT RQQDICLQHLHEAISCSEENHYDDLLLMCYTIAGLYYNSHFDEISAVQYYMKAYHIALEQ NNLHEQMVILNNLCVLFMQKNDTVEALRYIRNAYEVFLKQQTPPEDHAQLIVILNLVELY IRNGQLNEAVNIYAAYGPLLHEGQAKGLRLHVALLCELFLADAFHRSDEIQKIADYFASA KLHHHLNRSMYFAFYNDIFDILLNIKDKKRCEQFLQYMGEICLEDDIEQQLQLHLSWINF AEVFHMEDTLINSYKQYYLLQKMVVNVTNKTKAESMKEKILMEHMLEEQERIVREKNVLE ARVKIDGLTGLFNRSYFNTLCDVMQNNPDVKAIGIILVDVDYFKEYNDLYGHYKGDELLR RVALCLDENGDSRFFAARYGGDEFICLCVNTEKEEIESYLKRVYEDLRLAHIEHATSPAA SLATVSIGYSLFDNDEGFDLETAITMADTALYQAKNSERNRHSCCL >gi|312956088|gb|AENW01000020.1| GENE 13 15198 - 15467 263 89 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1621 NR:ns ## KEGG: CDR20291_1621 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 83 1 83 88 96 62.0 3e-19 MIESRCGIKCGSCAYKEQMGCTGCLHIQKPFWGEGCPVKSCVEEKKLQHCGECETFPCEL AKAFAYDEKQGDGGERLKTCRCWKEGIPG >gi|312956088|gb|AENW01000020.1| GENE 14 15467 - 15835 379 122 aa, chain + ## HITS:1 COG:lin2819 KEGG:ns NR:ns ## COG: lin2819 COG2315 # Protein_GI_number: 16801880 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 6 112 8 115 120 66 37.0 1e-11 MDAESIQSALQAKNGVVMDFKLEWDAFRFLLFDKMFAMLGFNKQQEPILTLKLPPQDGAW YREEYAFITEGYYMNKVHWISVRYDLASRDLLMDLMEKSYTGFLCTLTKKQQQLIAGKAQ HT >gi|312956088|gb|AENW01000020.1| GENE 15 16109 - 16339 137 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIEKGNTFVDTIDTKEKYLKKRRYKTKAKLNIYLSIRVPEFDFGRLHEIYKNFPWEQHN HIKTALSKLKNLESDT >gi|312956088|gb|AENW01000020.1| GENE 16 16513 - 18027 1768 504 aa, chain - ## HITS:1 COG:lin0179_3 KEGG:ns NR:ns ## COG: lin0179_3 COG0516 # Protein_GI_number: 16799256 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Listeria innocua # 228 496 1 269 276 477 83.0 1e-134 MAYYFNEPSRTFSEYLIVPGYSSAECTPANVSLKTPLVKFRKGKEEPELSLNIPMVSAIM QSVSGEKMACALAREGGISFIYGSQTIENEAAMVRRVKATKAGFVYSDSNIRPDATLQDV LDLKDETGHATMAVTEDGTPEGKLLGIITSRDYRTSRMDPSTKVADFMTPFEKLIYGNEG CTLSEANDMIWEHKLNQLPIIDENQHLKAFVFRKDYDSHKEHPNELLDDQKRYIVGAGIN TRDYEERIPALIEAGADVLCIDSSEGFSEWQARTLKWVREKYGDSVKVGAGNVVDAEGFR FLAEAGADFVKIGIGGGSICITREQKGIGRGQATATIDVAKARDEYYKETGIYVPICSDG GIVHDYHITLALAMGADFVMLGRYFSRFEESPTKKVTINGTYMKEYWGEGSARARNWQRY DMGGSKKLSFVEGVDSYVPYAGALKDNVDLTLSKVKHTMCNCGTLTIEELQKNAKITLVS STSIVEGGAHDVVVKDNTLDAKVK Prediction of potential genes in microbial genomes Time: Sat May 14 02:14:08 2011 Seq name: gi|312956055|gb|AENW01000021.1| Clostridium sp. HGF2 contig00080, whole genome shotgun sequence Length of sequence - 27405 bp Number of predicted genes - 32, with homology - 28 Number of transcription units - 11, operones - 5 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 435 - 494 5.1 1 1 Op 1 . + CDS 593 - 1213 828 ## COG0035 Uracil phosphoribosyltransferase 2 1 Op 2 . + CDS 1216 - 1407 271 ## 3 1 Op 3 . + CDS 1400 - 1774 404 ## gi|293399940|ref|ZP_06644086.1| ATP synthase I 4 1 Op 4 40/0.000 + CDS 1774 - 2481 902 ## COG0356 F0F1-type ATP synthase, subunit a 5 1 Op 5 37/0.000 + CDS 2510 - 2755 435 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 6 1 Op 6 38/0.000 + CDS 2801 - 3319 751 ## COG0711 F0F1-type ATP synthase, subunit b 7 1 Op 7 41/0.000 + CDS 3307 - 3858 678 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 8 1 Op 8 42/0.000 + CDS 3871 - 5391 1914 ## COG0056 F0F1-type ATP synthase, alpha subunit 9 1 Op 9 42/0.000 + CDS 5395 - 6234 896 ## COG0224 F0F1-type ATP synthase, gamma subunit 10 1 Op 10 42/0.000 + CDS 6246 - 7646 1633 ## COG0055 F0F1-type ATP synthase, beta subunit 11 1 Op 11 . + CDS 7649 - 8041 491 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 8049 - 8087 5.0 12 2 Tu 1 . + CDS 8118 - 8288 69 ## - Term 8692 - 8723 -1.0 13 3 Tu 1 . - CDS 8801 - 11614 2534 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 11684 - 11743 3.6 14 4 Tu 1 . - CDS 11805 - 12281 537 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 12519 - 12578 8.5 15 5 Op 1 10/0.000 + CDS 12833 - 13123 421 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 16 5 Op 2 . + CDS 13149 - 14495 1636 ## COG3775 Phosphotransferase system, galactitol-specific IIC component + Prom 14527 - 14586 2.5 17 6 Op 1 . + CDS 14618 - 14836 158 ## 18 6 Op 2 10/0.000 + CDS 14833 - 15822 1049 ## COG2376 Dihydroxyacetone kinase 19 6 Op 3 . + CDS 15822 - 16469 659 ## COG2376 Dihydroxyacetone kinase 20 6 Op 4 . + CDS 16489 - 17529 1345 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 21 6 Op 5 . + CDS 17577 - 18905 1088 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 22 6 Op 6 . + CDS 18920 - 19702 748 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 19728 - 19767 4.0 + Prom 19722 - 19781 4.8 23 7 Tu 1 . + CDS 19854 - 20522 659 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 20567 - 20619 1.5 + Prom 20964 - 21023 6.0 24 8 Op 1 . + CDS 21089 - 21535 451 ## COG1490 D-Tyr-tRNAtyr deacylase 25 8 Op 2 . + CDS 21547 - 22395 912 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 26 8 Op 3 . + CDS 22397 - 22594 273 ## 27 8 Op 4 . + CDS 22609 - 22824 254 ## COG4481 Uncharacterized protein conserved in bacteria + Prom 22836 - 22895 6.7 28 9 Op 1 . + CDS 22996 - 23193 298 ## COG1476 Predicted transcriptional regulators 29 9 Op 2 . + CDS 23199 - 23609 501 ## gi|293399778|ref|ZP_06643924.1| hypothetical protein HMPREF0863_00061 30 9 Op 3 . + CDS 23682 - 24785 1353 ## COG0012 Predicted GTPase, probable translation factor + Term 24864 - 24900 1.1 - Term 24822 - 24872 2.8 31 10 Tu 1 . - CDS 24952 - 26307 1513 ## COG1073 Hydrolases of the alpha/beta superfamily - Term 26357 - 26404 2.6 32 11 Tu 1 . - CDS 26418 - 27344 523 ## COG0675 Transposase and inactivated derivatives Predicted protein(s) >gi|312956055|gb|AENW01000021.1| GENE 1 593 - 1213 828 206 aa, chain + ## HITS:1 COG:BH3764 KEGG:ns NR:ns ## COG: BH3764 COG0035 # Protein_GI_number: 15616326 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Bacillus halodurans # 4 206 6 209 209 260 64.0 1e-69 MLKVLQHPLITHKLTQMRKKETGTKDFRQNLDEIAGLMAYEISRDFPLQPVEINTPVAKT TTYELAKEIVLVPILRAGLGMVNGICDLIPTVKIAHVGLYRDEETLEPHTYFEKYPKEVK DAIVMIVDPMLATGGSAIAAIDMVKKQGAKNIRLVCLVGAPEGVRAVEEAHPEVDIYLAA LDEKLNEKGYIVPGLGDAGDRIFGTK >gi|312956055|gb|AENW01000021.1| GENE 2 1216 - 1407 271 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEAYQAMRLMFTMVLACGAVVWIGAWLDDVFHTSPWCLLILLAYAIISSLYLMIRKLGD DHE >gi|312956055|gb|AENW01000021.1| GENE 3 1400 - 1774 404 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399940|ref|ZP_06644086.1| ## NR: gi|293399940|ref|ZP_06644086.1| ATP synthase I [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 123 1 122 122 107 50.0 2e-22 MNETRKMGMEIRILTLLLCAAGCVVCIILFPGAWKQGVMGILIGSLTGIMGFNMIQNMVG HIDGELADIKSRAFRSYTRRYMLYAVIFALSAIAGAHIAALLVGMLLHKCSILIYSWKHR KEDE >gi|312956055|gb|AENW01000021.1| GENE 4 1774 - 2481 902 235 aa, chain + ## HITS:1 COG:MA2437 KEGG:ns NR:ns ## COG: MA2437 COG0356 # Protein_GI_number: 20091268 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Methanosarcina acetivorans str.C2A # 62 228 59 215 229 95 36.0 6e-20 MDDKFDGIVLTLFGHNIEFQQSIINWLILCVLFSIFFIWAGKNFEKADVRKAPSGILLIT EMITGLCTNIIGDNLKHETKHYLSFLGTLTMMMAVSNLLGLLGLQPPTSNLSFNVTLALM MFLTIQYNGIKKGGLGARLKELTEPMWLLTPLNVIGELALPISLSMRLFGNILAGSIIML LVYTMMRSFLPFGVLGYIATPFLHAYFDVFSGLIQTYIFFTLASFFLSEQVAPEE >gi|312956055|gb|AENW01000021.1| GENE 5 2510 - 2755 435 81 aa, chain + ## HITS:1 COG:FN0363 KEGG:ns NR:ns ## COG: FN0363 COG0636 # Protein_GI_number: 19703705 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 8 78 10 80 89 68 61.0 4e-12 MEFNEYFVQGMALLGAGIAMIAGLGPGIGQGIAASKGAESVGRNPDAAGKIRSIMVLGIA LAETTGIYALIVALILIFMKG >gi|312956055|gb|AENW01000021.1| GENE 6 2801 - 3319 751 172 aa, chain + ## HITS:1 COG:SP1512 KEGG:ns NR:ns ## COG: SP1512 COG0711 # Protein_GI_number: 15901359 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Streptococcus pneumoniae TIGR4 # 15 167 11 163 164 83 32.0 2e-16 MDFDINAYLRLNPMDMIMVCVSTLIIIAIAKHFFWDKVLAYLDARKAAIQADIDAGMQSR EAGEQYKRQYEEQMANARGEAHEILESAKANAVQEKREILAAARGEAEAVKEKARKDIER EKVQARAGMKDAIVDVAFEAAKQIVNKELDESTHKQYVDDFIEHAGDESWQA >gi|312956055|gb|AENW01000021.1| GENE 7 3307 - 3858 678 183 aa, chain + ## HITS:1 COG:sll1325 KEGG:ns NR:ns ## COG: sll1325 COG0712 # Protein_GI_number: 16329328 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Synechocystis # 6 168 11 174 185 82 31.0 5e-16 MAGIAAKSYSDALFALAQEEQKLDTFKADVCMMDEQLKAYPDFMRVLTHPKIHKEEKKQT LASVFGSEVDHMVLNFAKLLIDKSRFQSFHDITREFVKQYNKVNNIEVAHVRTAKKLDDA EIKRLKSMLEEKLSKTVELHIQEDPDLLAGLRIKINDMVLDNTARSRMDNLKQLAQSEPV QES >gi|312956055|gb|AENW01000021.1| GENE 8 3871 - 5391 1914 506 aa, chain + ## HITS:1 COG:BH3756 KEGG:ns NR:ns ## COG: BH3756 COG0056 # Protein_GI_number: 15616318 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Bacillus halodurans # 1 500 1 498 502 630 63.0 1e-180 MSLKPEEISKLIKDQIRRYDEDLEIDETGTIITVGDGIALIYGLQNAMAGELLRFPGDIY GMVLNLEEEHVGAVLMGDDSNIREGDEVKRTGRIVEVPVGDGMLGRVVNALGQAIDGGEP IKSDKFRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGRGQRELIIGDRQTGKTAIAI DTIINQKNNNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASEPAPLQYIAPY AGCAIGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHSRLLER AAKLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRPAVDSG LSVSRVGSAAQIKAMKQVSGSLKLELAQFREMQAFAKFGSDLDAATTETLAHGERLTKLL IQNQYDPLPVTHQVLSLFAAKNKFLKPVKVEDVQMYEKEMLKYMERNHADILTEIEEKQA LDDALSANIKAALQAFEAEFKNMIEG >gi|312956055|gb|AENW01000021.1| GENE 9 5395 - 6234 896 279 aa, chain + ## HITS:1 COG:PA5555 KEGG:ns NR:ns ## COG: PA5555 COG0224 # Protein_GI_number: 15600748 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Pseudomonas aeruginosa # 3 278 2 286 286 178 38.0 1e-44 MAAGKLEIKARIRSVESTKKITKAMQLVATSKLKKQKQYMEENREYAYYLKETVQEILSS IEHSRHPYLQKQEGKPYTIVFTSDMGLCGGYNANIFRMLQHEIGNEGDFVIIGARGANWI HNKDFHVVQSETDLEEDCYSELVGVADHALELYRKQEISEIRILYTHFVNSVTFEPKLIT LLPVEKEEREKATTAETIFEPAGDRILDTLVPMYVRSLLYSYFLETKTSEQASRRMAMES ATDNAEELKETLELQFNQARQAAITQEITEIVGGVNAME >gi|312956055|gb|AENW01000021.1| GENE 10 6246 - 7646 1633 466 aa, chain + ## HITS:1 COG:CAC2865 KEGG:ns NR:ns ## COG: CAC2865 COG0055 # Protein_GI_number: 15896119 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Clostridium acetobutylicum # 1 464 1 463 466 665 73.0 0 MSKNTGKIVQVIGPVVDVAFENGDLPQLLTAIEIPLKDSESLVVEVAQHIGDERVRCIAM GGTDGLVRGMEAIDTGSAIRVPVGKEILGRMFNVLGREIDGLGPVGTENTLPIHRQAPGF EEQQTSAEMLETGIKVIDLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVV TGVGERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDHDHQ DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKDGSITSVQA IYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYE VARGVQTILQRYKELQDIIAILGMDELSEEDKIIVNRARRVRNFLSQPFHVAEVFSGIKG CYVSREDTVRSFKELLAGKYDDLPEQAFMFASTIEEVVEKAKALEN >gi|312956055|gb|AENW01000021.1| GENE 11 7649 - 8041 491 130 aa, chain + ## HITS:1 COG:BH3753 KEGG:ns NR:ns ## COG: BH3753 COG0355 # Protein_GI_number: 15616315 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus halodurans # 2 129 4 132 133 96 42.0 1e-20 MIKIKIITPLGLYKEGEVGGVHVRTVEGETTILPNHMPIVAMLTTCKCSLMEGNEYKDYA IAGGLLQFADNEMRILADAIEGREEIDIERARRAKQRAEERLKKMDNRTSIKRAEVALAK AINRIKVYGG >gi|312956055|gb|AENW01000021.1| GENE 12 8118 - 8288 69 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MICLLFSIPAKLDVMLWLQAMYKTLGYSEFFNWQIYDAFSLLAVIMQSAGKRMIGN >gi|312956055|gb|AENW01000021.1| GENE 13 8801 - 11614 2534 937 aa, chain - ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 16 375 21 375 464 296 45.0 1e-79 MSEQEVFDYIYSVITREYLENRIQKKENFGITAKDIADHFNTYRSTVSTMLNTAVKNGLF IKIETRPVLFVPVDIIKKELHVPLEKSVYTPEEIRDLFFKKEQEADSFSIMIGYDGSQSL QIKQAQSAILYPPKGLHTLITGESGTGKTLFAHTMYDYGRKIKGMSEKEYPFVEFNCADY YHNPQLLLSQLFGHIRGAFTGADQETEGLVEKANHGILFLDEIHRLPPEGQELLFYLMDT GQYRKMGEANTIRKADILIIGATTENPKDVLLKTFKRRIPLTINLPPLRERPLQEKLKIM EHLFSKEAILTQRTYIIDADIVKAITLYDFTENIGQLASEIKILCARSFLESKTKEFGEI KVPYVFLSDNIREAYKKYRKIGYTFTDNYENYNYDLVITPSNEITHVKENVLNEEAYCSL IDEIRNYSRQGLTSDEVAIRISSAVSSYYDEILNSMYFKTVNKDELYKIIEPRIVDFSLE VMKEIQNRLSVKITEQSILVLAFHLKFLIDRLRKIKLTESSSVPVKTGDAIVDDMIDRIE SKFSLRLPTDEKKFFQLLIKNITSDIVPDNSSKAALYILAHGNTASSIAEVCNRLLHTDF VRAFDMPLTQDVNQSYQLFMEEIESLHLKKGVMILADMGSLLDFGHKLTRDTGIPTHTIP NVSTAIALDFAHIMLNRNEHIDLTYNEYLIKNRFEPAFASSEKEPAIISACSSGQGTSIA FKNMIVEILKENSLGYIHVFALSNEELQKKNETYQEVVGSYNLVAVIGNVHIDVDAPFFH ISELVTDDKKENFIKFLNKTGVSEQKTKHKKTDQSAEEAAGFLAQHVMYVNPLAVQKVAA EFLENLFDDLEYEEKNRASTGFSLIIHIGFMIERIIANKTIIFDHKTPYLDSNKEIFQKI RSHIKSIEEAFEIEISDDEICYMMITLYPNTYDAAVA >gi|312956055|gb|AENW01000021.1| GENE 14 11805 - 12281 537 158 aa, chain - ## HITS:1 COG:BH0192 KEGG:ns NR:ns ## COG: BH0192 COG1762 # Protein_GI_number: 15612755 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus halodurans # 6 151 1 146 160 90 38.0 1e-18 MEKYNIRDLLFEELIELTLEAEDFEDAIKKIGEDAYRKGYVKEGFADAVIKREKLYPTAL PTEVLKVAIPHPMERDTVKKSAIIITKLKTPVDFTLMGSDNETVPVNIIFTLAVNGAEHQ LTILQKLVGMFSEKESMERIKASTTPKEIMNSLIELLS >gi|312956055|gb|AENW01000021.1| GENE 15 12833 - 13123 421 96 aa, chain + ## HITS:1 COG:lin2201 KEGG:ns NR:ns ## COG: lin2201 COG3414 # Protein_GI_number: 16801266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 1 96 1 91 91 83 52.0 7e-17 MKTIIVACGGGIATSATCATKINMALEERGLSNLAKAEAVDIKSLDNFIKTADVYVSITP MRGVVQSYDIPVISGIPLLTGMGKDACIDEIVKALK >gi|312956055|gb|AENW01000021.1| GENE 16 13149 - 14495 1636 448 aa, chain + ## HITS:1 COG:lin2200 KEGG:ns NR:ns ## COG: lin2200 COG3775 # Protein_GI_number: 16801265 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Listeria innocua # 1 436 1 440 449 320 44.0 5e-87 MEMLTTVFQGLLDLGAAVFLPIVLFIIGLIVGMKPGKAFSSALTLGVAFIGINLLIGYMG DTVGAAFTTIVEGSDSTLKYIDMGWAPALGLAWQWQYAFLMFPIQIAINVIMLLLGWTNC LNVDMWNVGNKVFTAFLVTSACNNVIVGFIVAIVQIIAELKNADYTKYQILELTGVPSVG MPHCMFLSNIFFYPIANILDKILPNTKTLNAQEIRNKIGIFGENHVLGFLMGTIIGLAAG QGSGALLLGVQAGTALTLFPMVSKLFMTALTPISDAASEWVKKKFPGRELIIGLDWPILA GNSEIWVAIILTIPVALIFSLILPGNTALVLGNLMNVCVCVPLFLAMKGDVLKMCIVSWI WCPILSYAASVMGPLLTSLANTAGTYNTDITWWGCDIAEIRFAIYEAATGNMIGIVACVA VVALGILYFLKLAPAREKAAKERLESGQ >gi|312956055|gb|AENW01000021.1| GENE 17 14618 - 14836 158 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRFQQFWWYIGVCMTAVALLLSVVTRNWVLAILCAVSTAGLRKLNDKVELPKVYTQRGI KNEWFTPGRQQK >gi|312956055|gb|AENW01000021.1| GENE 18 14833 - 15822 1049 329 aa, chain + ## HITS:1 COG:BH3397 KEGG:ns NR:ns ## COG: BH3397 COG2376 # Protein_GI_number: 15615959 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Bacillus halodurans # 1 311 1 314 330 301 51.0 1e-81 MKKIINNPNAVVEEMLQGIEIANPDVLYDREGVVIARKEKSDKVGLVSGGGSGHEPAHAG YVGYGMLDAAVSGNVFASPSPDRVLRGIQLADSGHGVLLIIKNYAGDIMNFEIAEELAGM EGIEVDHVVVRDDVAVAESDESTGRRGIAGTVFVHKLAGAKAETGASLAEIKRVAEKTIE NVRSFGVSLSACTIPAVGACGFTIEEDCMEVGMGIHGEAGIEKTKLKPSKEIADIMVNRI LADKDYGHSEVAVMINGLGATPLMELYILASDVHTRLCAEGLKPVKYYVGNYMTAIEMAG ASYSILQLDEELKRLLEYPSNTPAFKEIG >gi|312956055|gb|AENW01000021.1| GENE 19 15822 - 16469 659 215 aa, chain + ## HITS:1 COG:FN1841 KEGG:ns NR:ns ## COG: FN1841 COG2376 # Protein_GI_number: 19705146 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 10 198 2 190 202 138 36.0 1e-32 MGFQLQTKDFIRYFQEAREVIAAQRDYVTELDSTTGDGDHWVNVNMGFEKITALSKELED MTLADMFKKVGMTMYSAVGGSSGALYGSGYMAAGRACAGKAVLDVHGLYEVYDAMLQEIM KRGKTEPGQKTMIDALYPALRAYREGLDAGRRDEEIIQDFMEGAANGAKRTKEMEAVKGR ASYRSDKGVGHLDPGAVTMAMQLECMGNMILNTLK >gi|312956055|gb|AENW01000021.1| GENE 20 16489 - 17529 1345 346 aa, chain + ## HITS:1 COG:alr5117 KEGG:ns NR:ns ## COG: alr5117 COG1063 # Protein_GI_number: 17232609 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Nostoc sp. PCC 7120 # 7 344 6 339 341 243 40.0 4e-64 MMKKIQFYAPGDIRVEEAEIPAPKAGEIVIKNEVTLTCGTDVKTYKRGYRYEPPFGMGHE ASGVVYAVGEGVTGFTVGDRVVAHNSASCGTCYYCKKGQESMCVDLIQNQFTNGAYAEYQ LIPERIVKLNTFHIPEGMSYKQAALLEPLACALYGTEMTNFDLGDYVCVNGCGPIGLMFV RMCVLRGAHVIACDMTPERLALAKKLGAQEIINIKDLNGKDQAEAVKELTPDARGVDAAI EAAGLPEVWQIALRMARPGGEVLFFGGTKKGLEVPVDTTLVHYSQLTLKGVFHTTPQHVN AAFEMLKMGAISAEDFVQNEYCIEDTEKAIVEHASGKVIKNCIVYK >gi|312956055|gb|AENW01000021.1| GENE 21 17577 - 18905 1088 442 aa, chain + ## HITS:1 COG:RSc0408 KEGG:ns NR:ns ## COG: RSc0408 COG1508 # Protein_GI_number: 17545127 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Ralstonia solanacearum # 1 440 1 499 499 193 29.0 6e-49 MKQSLEIIQNQKQKFSSKLVPSMEILALSQHELESLVDASLMDNPFSDVDQNTISLKTRD VDLDFKRVRKKQGELQEIAYADESQDDLFEHVIVQLYPHMQTKKDEEVFTVLLESLDSRG FLSETPDDLCRFLNIKKARLLQYLHVLQHVDPKGLGAKDTGECICIQLSEIEGSTLAQHI VCSHLEALSTGDFLKIAKLEHTDVEHVKQALSLIRSLNPIPANGFRVREKTVFIIPDVYI RKEDSTILLEMNARLQDKLSMNTENYELYKSAACNAEAKAFLKEKLNDFKWLQYSISRRS VTLKKIIAFLVEYQAAFFQTGDERALKPLRLVDIAEQLKMHTSTISRAISGKFFQCEYGT YSFHFLVPRCYERQGEVTASIDTIRNEIKEIIRSEDKQHPYSDEKIHQLLEEDGFVISRR SVTLYRKECGIPSSRNRKTIHI >gi|312956055|gb|AENW01000021.1| GENE 22 18920 - 19702 748 260 aa, chain + ## HITS:1 COG:lin2979 KEGG:ns NR:ns ## COG: lin2979 COG0235 # Protein_GI_number: 16802037 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Listeria innocua # 2 259 4 264 273 235 43.0 5e-62 MNILDVAFVEELVDACQYFWEAGWGEYHAGNISYLLSDDEFDQLKEYMQVSASVDVAFDT AGLKGKAFIVTKSGACFRTMKKKYERDLGIIQFKENGYDILWGLDQGRGRPTSELPAHVL CHRARLADDANNKIVMHCHPTYLNAMTMIHELDEESFTQTLWKMNSECALVFSEGLAVLP WMKCGEGPIGPATADKMKDKRVVVWPFHGIFSSGNSISDAIGLIEAIDKNAHVYVLVKAN MMHGMTDENVRELKEHFGLS >gi|312956055|gb|AENW01000021.1| GENE 23 19854 - 20522 659 222 aa, chain + ## HITS:1 COG:STM2974 KEGG:ns NR:ns ## COG: STM2974 COG0235 # Protein_GI_number: 16766279 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 5 194 6 187 215 114 36.0 2e-25 MLEHLKKDVCEIAKRAQRDGLCKHKSGNFSARDAKSGYIVITPTSVDREMLTPRDMIVMD LDANVLEHASGLRPTSEALMHLMIYRTRKDARAIVHTHSMYGTTFALLNKPIPAIVYEVA NFGLTKARIPVAPYGRPGTMELADSVVEVCKEAECFLLEKHGTVAFDTRDIYEAYLKANY IEELAQLYYNALTVHEGKEPEAFSQEELQCWEYPKEISFADE >gi|312956055|gb|AENW01000021.1| GENE 24 21089 - 21535 451 148 aa, chain + ## HITS:1 COG:BH1243 KEGG:ns NR:ns ## COG: BH1243 COG1490 # Protein_GI_number: 15613806 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Bacillus halodurans # 1 146 1 146 146 172 55.0 1e-43 MRVLLQRVQHASVRVDGAITGSIQQGFLLLVGITPSDTEDIMRKMAGKCAQLRVFEDENG KMNRGLQDIGGSILSISQFTLYADCKRGRRPGFEKAARGDFAQPMYHAFNEELRTYGIHV ETGIFGADMKVDLLNDGPVTILLDSEEW >gi|312956055|gb|AENW01000021.1| GENE 25 21547 - 22395 912 282 aa, chain + ## HITS:1 COG:BH2784 KEGG:ns NR:ns ## COG: BH2784 COG0190 # Protein_GI_number: 15615347 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus halodurans # 2 280 3 279 279 305 55.0 8e-83 MGTILYGSEIAKDIRTSLKEQIDELREKGKRIPKLVVILVGDNPASLSYVTGKEKACREI GMENILLRLQEDTTEEALLAEIHRLNTDTSVDGILVQLPLPKHMDEHKVLFAIDPLKDVD GFHPYNIGKLMLQEDTYLPCTPKGILRMLDTAGYSDLSGLRAVVIGRSNIVGKPVAQLLL NRNATVTICHSRTRNIEEICAEADILIASVGSPRLVTADWVKKGAVVIDVGINRVDGRLC GDVDFETVKDKAAVITPVPKGVGPMTIAMLLENTLESYRKHS >gi|312956055|gb|AENW01000021.1| GENE 26 22397 - 22594 273 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIEFLGEILVEGVAYGTYGLMELFLDSLYKGWNKTLKKLLCVLMGITMWILIGYMIIGI LEIVL >gi|312956055|gb|AENW01000021.1| GENE 27 22609 - 22824 254 71 aa, chain + ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 64 1 62 65 85 66.0 3e-17 MIEKDYDLNDIVEMKKEHPCHKSKYWKIIRMGADIRIKCLGCGTSVLFPRVQFEKKLKRI IEKAPGETNEN >gi|312956055|gb|AENW01000021.1| GENE 28 22996 - 23193 298 65 aa, chain + ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 64 2 63 68 94 75.0 5e-20 MAKNLKLKAARAAMDLTQEQLAEKVSVTRQTINAIEKGDYNPSINLCITICRVLGKTLND LFWEE >gi|312956055|gb|AENW01000021.1| GENE 29 23199 - 23609 501 136 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399778|ref|ZP_06643924.1| ## NR: gi|293399778|ref|ZP_06643924.1| hypothetical protein HMPREF0863_00061 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 134 1 134 136 66 31.0 6e-10 MKNFDERQEQVRGRIMTRAFLITIILMLLAAFLNDMQLFDFEKNVGFGETLISIVCIAIT YGSVASILSNSYFGPLKDGRMAFIAYVFTALSIVLAALTIFDLIRGETLVVMNIISLLMV FSISISLWIRKSDWKK >gi|312956055|gb|AENW01000021.1| GENE 30 23682 - 24785 1353 367 aa, chain + ## HITS:1 COG:BH4051 KEGG:ns NR:ns ## COG: BH4051 COG0012 # Protein_GI_number: 15616613 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Bacillus halodurans # 1 367 1 366 366 467 64.0 1e-131 MPLTAGIVGLPNVGKSTLFNAITKSQVEAANYPFATIQPNVGVVEVPDYRIDRLVELFHP KKTIYTTFEFTDIAGLVKGASKGEGLGNQFLSNIRLTDAICHVVRCFDDADITHVEGSVD PIRDIEIINLELIMADLQTIDNRLSKVERKAVTNKDKDALAEVVVLKKLKEALEAGKPAR SVELDKDELLLIKAFSLLTIKPMIYIANMSDEEIADPQANPYFQKVKELANLEHNEVVPV CAKIEEELSELDKEEKTEFLNELGIQESGLDKVIKTAYHILDLCTFLTAGEDECRAWTFH RGMLAPQCAGVIHTDFEKGFIRAECYKFDDIDKLETEQAVKEAGKLRLEGKEYVVQDGDV LHFRFNV >gi|312956055|gb|AENW01000021.1| GENE 31 24952 - 26307 1513 451 aa, chain - ## HITS:1 COG:TM0336 KEGG:ns NR:ns ## COG: TM0336 COG1073 # Protein_GI_number: 15643104 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Thermotoga maritima # 126 451 101 412 412 201 38.0 2e-51 MKKKIQIVICCLLCFLMAACSGEKEKKGQSDEVADIVLSDKQSDMALQFVKDLTQRKYDK LQKDYAYDEQMHKAVREDSFQKQLDAYNDSLGSLIEAEQPYGQSYQNSTIIMIPCRMEEQ NTNIQVSLNEQDQIQGLFFKPYKSQKKAAKAPDGVKEREVELQIADGKKLSGRLTTPAEG KSFPLVILLAGSGPNDMDETIYDNKPFQDIAWGLAKKGIASYRYDKRTYTYPESFTVKDT VEQEVIFDAVAAFSQMKQQKQIDTNKIYILGHSLSGYLIPRIAAETDGCAGYIMMAAPAR ALDELLMEQVTYLAKLDGNLTKDEQAAIDQYKQDQQDLQRIDELSDAKIFFGGMSKAYMK DLLSYDAVQQAADIKVPVLCAQGLRDYQVTEEDQAIWRKNFETHKNWKFTTYPNATHLMI DGEGTPTNEEYKTKGHVNQAFIEDMASFIKK >gi|312956055|gb|AENW01000021.1| GENE 32 26418 - 27344 523 308 aa, chain - ## HITS:1 COG:TVN0764 KEGG:ns NR:ns ## COG: TVN0764 COG0675 # Protein_GI_number: 13541595 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma volcanium # 1 288 121 387 416 194 41.0 2e-49 MIFTNQICKLRKDKHGWYVKFPKAVLQAGWVRDRYDLGKMDLHEQKLKEVRLIPNGDTIK LEIVCEIEIMEPTITIHEATRVAGIDIGVDNLTAIAFTSGHRPVLIKGNEIKAVNQFYNK QIAHYRSLLRTGKKDSKGIHQTKRMKRISEKRNRRVKDILHKASRKIIDLCVEEGIEVIV VGNNAGWKKRIHMGKKNNQTFVQIPFRTLIEMIKYKGEAAGIRVVVCEEAIQSKASSIDE DQIPVYGNDVTHTFTGKRIKRGLYRSKNGILINADINGASNIIRKVYPCMPKRERWSRGT VNVPVTCI Prediction of potential genes in microbial genomes Time: Sat May 14 02:14:44 2011 Seq name: gi|312956054|gb|AENW01000022.1| Clostridium sp. HGF2 contig00062, whole genome shotgun sequence Length of sequence - 5008 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 195 - 868 91.0 # AB019247 [D:1167..4068] # 23S ribosomal RNA # Erysipelothrix rhusiopathiae # Bacteria; Firmicutes; Erysipelotrichi; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix. - LSU_RRNA 895 - 1221 91.0 # AB019247 [D:1167..4068] # 23S ribosomal RNA # Erysipelothrix rhusiopathiae # Bacteria; Firmicutes; Erysipelotrichi; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix. - LSU_RRNA 1927 - 2712 91.0 # AB019247 [D:1167..4068] # 23S ribosomal RNA # Erysipelothrix rhusiopathiae # Bacteria; Firmicutes; Erysipelotrichi; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix. 1 1 Tu 1 . - CDS 2860 - 3075 165 ## - Prom 3314 - 3373 33.5 - SSU_RRNA 3374 - 4872 99.0 # EF399597 [D:1..1504] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Predicted protein(s) >gi|312956054|gb|AENW01000022.1| GENE 1 2860 - 3075 165 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPRHLELKKDATNGETRRGVVRTQRSVDIRMGKPGSSNELSPMSEYIAHEGGTRRTETSK YPEEKKIRMIP Prediction of potential genes in microbial genomes Time: Sat May 14 02:14:53 2011 Seq name: gi|312956042|gb|AENW01000023.1| Clostridium sp. HGF2 contig00026, whole genome shotgun sequence Length of sequence - 13522 bp Number of predicted genes - 11, with homology - 10 Number of transcription units - 8, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 118 - 972 1029 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 993 - 1052 6.0 + Prom 1096 - 1155 6.4 2 2 Tu 1 . + CDS 1182 - 1505 351 ## COG3870 Uncharacterized protein conserved in bacteria + Term 1507 - 1546 -0.9 3 3 Op 1 40/0.000 - CDS 1892 - 3580 1313 ## COG0642 Signal transduction histidine kinase 4 3 Op 2 . - CDS 3594 - 4295 812 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 4330 - 4389 2.1 + Prom 4289 - 4348 11.7 5 4 Tu 1 . + CDS 4584 - 5693 1121 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 5760 - 5806 3.5 - Term 6061 - 6106 10.0 6 5 Op 1 1/0.000 - CDS 6111 - 7304 1048 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 7324 - 7383 8.2 - Term 7509 - 7549 3.0 7 5 Op 2 . - CDS 7564 - 8808 1044 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 8843 - 8902 3.2 - Term 8835 - 8888 3.1 8 6 Tu 1 . - CDS 8988 - 10850 1963 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 9 7 Tu 1 . - CDS 11389 - 11607 65 ## + Prom 11413 - 11472 8.7 10 8 Op 1 . + CDS 11606 - 11998 257 ## gi|293399770|ref|ZP_06643916.1| conserved hypothetical protein 11 8 Op 2 . + CDS 11995 - 13522 1675 ## COG0018 Arginyl-tRNA synthetase Predicted protein(s) >gi|312956042|gb|AENW01000023.1| GENE 1 118 - 972 1029 284 aa, chain - ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 3 281 2 279 280 240 43.0 3e-63 MSKLGLVLEGGGMRGIYTAGVLDFFMEQNLYTDGVIGVSAGACHACSYVSKQIGRAYRTN TAYLKDKRYMSVSSLLKTGDFFGAKFVYEDIPNTLDPYDFDAFNTSHTKLYAVASNLETG KAEYLQCINMKRDVIYVRASASLPLLSRIVEVDGKKLLDGGATDSIPIHKFQEMGYTKNI VVLTQCKEYRKGKNNLLPMIRRSYKKYPKFIKALETRHIAYNRTLDELALMEKEGSVFLI RPSSPVEISRLEKNEARLRELYEQGYMDAKNSFEELKSFIANEN >gi|312956042|gb|AENW01000023.1| GENE 2 1182 - 1505 351 107 aa, chain + ## HITS:1 COG:lin2840 KEGG:ns NR:ns ## COG: lin2840 COG3870 # Protein_GI_number: 16801900 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 104 1 106 109 104 50.0 4e-23 MKLILAIMSNDDSPAVSSALTKENYQVTRLATTGGFLRAGNTTLIVGTDDDKIERAIEVI GEYSRRRTEVVPSTASYDIGRYASFPVEVQVGGATIFVIDVEKFIKL >gi|312956042|gb|AENW01000023.1| GENE 3 1892 - 3580 1313 562 aa, chain - ## HITS:1 COG:BH1154_2 KEGG:ns NR:ns ## COG: BH1154_2 COG0642 # Protein_GI_number: 15613717 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 316 553 31 266 274 210 46.0 5e-54 MKKVHWTTLILLSGIALAIISMFLVFPSLDQKAIEEYKTHYKYINSEEERDFSGNTFIKE PADDSIPMEYSRIEEYMEPALQRITLLVGTLLFAWSLLMPYKWAVKSGFYRFFTQRLPYE ITLGAALLGLYFYKIRGSELVYRMFRLPEDFSLDILSADTWQISSYYLLQIACLSGLFAV LSGCGYAIRSMQHNGVRVSLQKHSLLTQNSVLLGRQAKRLYRYIIGFDFHDKGELRLLAA LFLHIVCILIVCIYRDSGIFFYLLLSCYCLILYSIRHRQNSRMKRDFQSLEGSIQRVANG DFQTTVDEDLGIYESLKDNLQNIETSFQEAVAQEVRSQNMRTELITNVSHDLKTPLTSMI SYIDLLKNKNLPEEERLRYITILESGSNRLKHLIEDLFEVSKASTGNIQLDRMDVDLISL IKQVEMEYEALFIQHDLTIRNTFSKEKIVLSLDPQKTFRILENLLVNAGKYALEHTRVYV YVEEREQEVYISVKNISATELDFDPADIMERFQRGDKARNTEGSGLGLAIAKSFTVLQNG HMHISFDADLFKVELIFQKELP >gi|312956042|gb|AENW01000023.1| GENE 4 3594 - 4295 812 233 aa, chain - ## HITS:1 COG:BH1153 KEGG:ns NR:ns ## COG: BH1153 COG0745 # Protein_GI_number: 15613716 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 5 232 7 232 232 218 50.0 9e-57 MSSVILIAEDEASIADAIEIYLKSQGYQTLKAANGAIAWEQLQNNTVDLAIIDVMMPVMD GIALTMKIRELYEFPIIILSAKSEDIDKITGLNIGADDYVTKPFVPMELLARVHAQLRRH LRYQQLLEQKQEVEDRLLLGGIELHRKSKEVFVDGESRRLTPIEFRILQLFMEHPGQVFS SDDIYEHVWNETAVNTETVMVHIRNLREKIEINPRAPRYIKVVWGVGYKIEKQ >gi|312956042|gb|AENW01000023.1| GENE 5 4584 - 5693 1121 369 aa, chain + ## HITS:1 COG:lin2213 KEGG:ns NR:ns ## COG: lin2213 COG1820 # Protein_GI_number: 16801278 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Listeria innocua # 4 365 3 377 380 158 28.0 2e-38 MKRIIENIKFMQDGTMVFGDLHLEDGFVERIDYKTPHMVSDIAIPGLVDIHTHGFHGYSC ENTDIGNLHALALEYPKRGITSFCPTVSARSLDEFRTIIDAYRKAFQGDYRGARYEGVHL EGPYLNPDRRGSMKKENLMEIHLGELEDFLSEYHDNIKIMTIAPDVKNAMEAISLLHLYG VEISLGHTNADFTQTNEAFACGATQITHLGNTMPEITHHKPGMMDAVFLSDCLCEVIMDG VHMQKEMLKWVIRLLGCSRVVAVSDGTPFSGFHYPDGYELEDGSVIRNGAVYKEDVLLGS SCDLLDIFQYLYKQEGYDLSDCIRMCSTNAARMLKTYAHEIGLGKNINLVILGHDMRVKE VIINGRSAL >gi|312956042|gb|AENW01000023.1| GENE 6 6111 - 7304 1048 397 aa, chain - ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 42 233 2046 2279 2566 113 34.0 8e-25 MNFIEKNTKKVALVLCLATAGTAVTTVYAAQNSDGWHGSGTDRVYKMEGQVKTSSWVFDE AGSYYLNNEGHPITSSWKEINGSTYYFDAEGHRVNGKQVIDGHEYTFQKSGVLLTGWNEV KDTYYNEFGVAVTGVQKIDNKTYNFGEDGKLVTGWTKVNGKKVYFTKDGSLASGVVTIDG KKYNFNDDGTITTGWVKKDGEKYYYTDYGFMTKGWKTIDGKKYYFNKKGQAATKTEYAGY KFDKNGVAKKIKKKEKAETTDNASEDVADSEDTASNGSGSRAASSSKNLGTADGGIASAA LAQLGVGQDCTALASNALAAQGIYFHGWPAEYMSLGSVTSSPQPGDLIYYDDAGAGVPHI AVYVGNGQAVHGGWKGGTTVEASAYIGSGPVFIRVNK >gi|312956042|gb|AENW01000023.1| GENE 7 7564 - 8808 1044 414 aa, chain - ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 35 252 2341 2564 2566 111 33.0 3e-24 MNFIEKHTKKVALILCLATAGTAVTTVYAATNADGWHGTGADRIYKEEGAVKTSSWLFDE SGSFYLDADGHPIISEWKTINGSVYYFDSEGHRVNGKQVIDGHEYQFQKSGILLTGWNQT KTSYYSEFGEKLNGLQTIDEKQYLFDKDGNIVSGWQTVDGKKLYFKEDGSLATAKTEIDG KTYNFSSDGSLQSGWVKKDGEKYYYDKYGFMTKGWKTIDGKKYYFNRKGQAATSTKYAGY KFDKNGVAKKIKEKKKEETTESNENVQSTRTAGNSSAAASSSSSSSSANLNPAGSGSNSS AAGIAASMVGSPYVWGGSSPAGFDCSGLTSYAYAQAGISIPRTAGGQASVGSAVSYGNMQ PGDLIVWSGGAHVSIYVGGGQMVHATNPSTGVITSSVSFWSNNSGQSITAIRRP >gi|312956042|gb|AENW01000023.1| GENE 8 8988 - 10850 1963 620 aa, chain - ## HITS:1 COG:BH3812 KEGG:ns NR:ns ## COG: BH3812 COG0744 # Protein_GI_number: 15616374 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Bacillus halodurans # 20 562 35 586 687 377 38.0 1e-104 MKRIRKLVFGMIFALLTLIVCVYAYALFNRLPLDEQRKNITIYDVNGDIIYESNFKKNMQ WTSIDDIPEFVQDAFVSVEDKRFYYHAGFDPVRITKALGTNLIHGDIRQGGSTITQQYAK NLFLTNEQTLSRKVQEFFYAARLEMQYSKKDILEGYLNTVYFGHGVYGVNAAAEYFFDKK LNQLSIAETAMLIGIPNGPSIYSPFLHKDNAIKREHLILEVLKNNGVITSKQYEAAKKEK LKLSTNVNISTYGIDEYYIDAVIQELSKLNIDLNREIHVHTYYDPKVQMQLSNAVTKHVD LSSELEVAGIITQPFTGNVMAMVGGKDYTISQYNRAIYSSRQVASTIKPLLYYCALQQGF TPSTQFTSQKTTFRVSDDEEYAPTNYGNVYANGKISMINAISLSDNIYAVKTQLFLGVDT LHNALLDFNIRQSSPNPSEALGTVNMSLLELSRIYNTFASEGLYVKPALISHITSGNDVV YKREVQPKRLLQRDETLILNQMMTSTFDIRNKSYTFPSMYGHEPDITVAAKSGTSDWDSL VMGFNPEYTVGIWSGFDDNRELEKQYYTISKDIFKDTFNGLYKKRKGVWYQPSDGIQEKR VNPITGTEDSGGSVYWFKKE >gi|312956042|gb|AENW01000023.1| GENE 9 11389 - 11607 65 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSPLIMSIIAEIEYRATFFSLFLFKILTATLRTKYAYRTFLSNRAYYYNSGIIVINAKQ YYTFRIYKHIPL >gi|312956042|gb|AENW01000023.1| GENE 10 11606 - 11998 257 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399770|ref|ZP_06643916.1| ## NR: gi|293399770|ref|ZP_06643916.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 127 1 127 130 108 41.0 1e-22 MKKHIVVKQKHLYTEERNLMFEGQAFFSDSNGCLRLSYTERGSNTAVSVEAENEELRIQR DGELMTRLTFQHKKQTTGSILSEFGTIDIGVFTHKYIKRENIIAIEYDILSGDEVTDGYR ILWILKEDKV >gi|312956042|gb|AENW01000023.1| GENE 11 11995 - 13522 1675 509 aa, chain + ## HITS:1 COG:BS_argS KEGG:ns NR:ns ## COG: BS_argS COG0018 # Protein_GI_number: 16080786 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Bacillus subtilis # 3 509 6 518 556 586 58.0 1e-167 MNQIENNLKQALHNAVQKAFDTELDTASIVIEIPKDKSHGDYSTNVAMQLTRVLKNNPRK IAEAVVEALDKAAADIESCEIAGPGFINFTIKNTSLAQIITRVLQEQDNYGNSNDGQGLK VNVEYVSANPTGDLHLGHARGAAWGDSITRLMKASGYDVCREYYVNDAGNQIVNLGKSLQ ARYREHLGLDFDLPEDGYHGEDVKNIAIAIAEEYKDAYVEYSDANLKFFKEKGIAFELDK IRRDLDNFRVHFDVWSSEQSIRDEGKVEKALEVLHEKGLTYEKDGALWFATTRFGDDKDR VLRKKDGSYTYLVPDIAYHKDKLDRGYDLLVDLLGADHHGYIPRLKASIEALGNNPDKLQ VDIIQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGVDAVRYFFVQRAVDTHLDFDLGLA RKQSNDNPVYYAQYAHARICSILRQASEIAEAKSFELLTHEKEIALMKYINEFTNVVSDA ARSRAPHKVCNYIQKLAQHFHSFYNVCKV Prediction of potential genes in microbial genomes Time: Sat May 14 02:15:05 2011 Seq name: gi|312956039|gb|AENW01000024.1| Clostridium sp. HGF2 contig00010, whole genome shotgun sequence Length of sequence - 1459 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 18 - 77 5.3 1 1 Tu 1 . + CDS 120 - 740 396 ## gi|291548981|emb|CBL25243.1| Predicted transcriptional regulator + Term 976 - 1020 3.0 + Prom 824 - 883 6.5 2 2 Tu 1 . + CDS 1089 - 1458 287 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs Predicted protein(s) >gi|312956039|gb|AENW01000024.1| GENE 1 120 - 740 396 206 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|291548981|emb|CBL25243.1| ## NR: gi|291548981|emb|CBL25243.1| Predicted transcriptional regulator [Ruminococcus torques L2-14] # 2 206 7 211 211 328 87.0 8e-89 MKINFLGNNIQTIRKYRGMKQQELADKIGINMQSLSKIERGLNYPAYDTLEKIMEVLDVT PNELLSGEWKYINQAEKEVCQFLRAEERLNTELKHGHYDNFFDSEEEWLEYELEKLREYI TDYINGNNIQADDLYPIKEFIQHLKFQRLLDRYDDLYSMDMFGESIEGHKYKTPFQFVKR INPNSKEDIELLREVLRNNHFDDEDE >gi|312956039|gb|AENW01000024.1| GENE 2 1089 - 1458 287 123 aa, chain + ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 3 122 2 118 199 71 35.0 3e-13 MAKYAYIRVSSKDQNIARQVEAMQEVGLTKKQMYIDKQSGKDFIRKNYQRLIRKLKAGDE LYIKSIDRLGRDYDEILEQWRYLTRVKDIDMIVLDFPLLDTRNQVNGVTGKFIADLVLQI LSY Prediction of potential genes in microbial genomes Time: Sat May 14 02:15:17 2011 Seq name: gi|312956033|gb|AENW01000025.1| Clostridium sp. HGF2 contig00034, whole genome shotgun sequence Length of sequence - 5641 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 1, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 110 - 169 7.5 1 1 Op 1 . + CDS 238 - 1398 1033 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 2 1 Op 2 . + CDS 1388 - 2095 690 ## COG1266 Predicted metal-dependent membrane protease 3 1 Op 3 . + CDS 2115 - 4286 2780 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 4 1 Op 4 . + CDS 4330 - 4506 261 ## 5 1 Op 5 . + CDS 4529 - 5626 1262 ## COG0628 Predicted permease Predicted protein(s) >gi|312956033|gb|AENW01000025.1| GENE 1 238 - 1398 1033 386 aa, chain + ## HITS:1 COG:lin1547 KEGG:ns NR:ns ## COG: lin1547 COG0482 # Protein_GI_number: 16800615 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Listeria innocua # 4 376 9 369 371 404 54.0 1e-112 MSQKVLLGLSGGVDSAVAAYLLKEQGYDVTCAFMRNWDSFANNDIMGNPTIQDDVCPQEQ DYLDAKAVADKLGLPLLRVDFVKEYWDHVFTYFLEEYRKGRTPNPDILCNKYIKFDAFMD YARRLGFDTLATGHYAQVDHSAEESRMLRGADNNKDQTYFLCQVSQDALRHSMFPIGHME KQEVREIAERMELNSVAEKKDSTGICFIGERNFKEFLKNYLPSRDGDIMDIKTLEVVGRH SGVLYYTIGQRKGLGIGGNRGPWFVVGKDVQKNILYVTNGSESDWLHSDSCIVSGVNWFS SERPQGDYVCTAKFRYRQPDNDVILRFIDETTVFLRYPQMVSSVTAGQEAVFYQKEECLG GGVIEDVFKEGISLQHRIAGRVNNGN >gi|312956033|gb|AENW01000025.1| GENE 2 1388 - 2095 690 235 aa, chain + ## HITS:1 COG:BH0560 KEGG:ns NR:ns ## COG: BH0560 COG1266 # Protein_GI_number: 15613123 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Bacillus halodurans # 59 235 45 214 237 61 30.0 1e-09 METKPAVYSLSIGRMLALLVHYFAGYLYVYRIVATKITLAVEPGATILLPWVQLLIYVFT AGVAILLAWPVLRDSWMKFRRNTGANLKMSAYLIVVILAVNMLLSLLIGLLTQTGNSVNQ EEIRNASTVLPLMTILSTCVFAPIIEETVFRAGAFSCLRSRIGFWAAAIISSILFGSIHI VDSLLAGNLVDVSYLLVYAGIGMVLAYGYEKSSSCLVPGMVHAGNNIISMLFMLL >gi|312956033|gb|AENW01000025.1| GENE 3 2115 - 4286 2780 723 aa, chain + ## HITS:1 COG:BS_yrrC KEGG:ns NR:ns ## COG: BS_yrrC COG0507 # Protein_GI_number: 16079801 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Bacillus subtilis # 3 718 11 755 798 496 39.0 1e-140 MDEEEIILKAKHLHTIFRNDTNGYTVAKFVTYDANEEDFTATGYFSELNEDVLYKLHGDY VDHPRYGMQFQVAAYEKMMPNDESTLIRYFSSSLFPGIGVQTAKSIVEALGEDAIEIIKE NPETLKQITTLNARKRASIIQGIMEHEEADDSVVFFTRMGISVKTIMKMEAAYGEAMISM VKENPYRLIEEIDGIGFKTADKLAKELAFAEDHPYRIKAVILSCVLDLCMASGDTYTTLE QIQKRFCKEFDASVEIAPYLEELELDRLIMIEDGRIYHHTQYDAQNGIASFLAGFPYRES EEEVSFDVEDIGIMEQKFHIRYEDKQKEAITAFFKEPFLILTGGPGTGKTTIVKGILDLY QRYYPSDTIALCAPTGRAAKRLSELSSTAATTIHSLLKWDLETNTFLVNDKDPIQADLLI IDEFSMVDQWLFYHLLRACRMVKRIVVIGDEDQLPSVGCGCVLKDLIESACFPLVRLNKI FRQSEGSDVVTLAHQIREGSADILDHAKDIAFFPCQNYEVRDLILSVVSNALDKGYDPKE IQVLAPMYGGVAGIDALNNALQKMMNPSDSYKKELKVGYRLFREHDKILQLKNQPEDEVY NGDIGEIIEISYRDDNVHQKNCITADFDGVLVEYSGEQIYNITHAYATSIHKAQGSEYAI VIMPIVKDYRYMLQKRLIYTGVTRAKRSLVLLGDKEVFLHALRVEDRHVRRSTLQEKIKE MMG >gi|312956033|gb|AENW01000025.1| GENE 4 4330 - 4506 261 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKCVVAGLMGLAVGMYIGYSQEEGIEDLCRESRRKKKKVMKKMHKTYDHLCDCMDLD >gi|312956033|gb|AENW01000025.1| GENE 5 4529 - 5626 1262 365 aa, chain + ## HITS:1 COG:BS_yueF KEGG:ns NR:ns ## COG: BS_yueF COG0628 # Protein_GI_number: 16080231 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus subtilis # 39 328 33 342 369 87 22.0 5e-17 MKVSHVLDSLARGCRKLLVPLAAFLLLVLLLKQLQLYDWIVDIYKSCLPVLMGIVIAFLL QPLIDRLQQHVSQKLAVMLVYIGIALVLAVFVIGMIPIIYKQVMDFAEVVPVWMRHLEGF LDRYHIAIGNLETLKEKYLQEGYIIVIDSLRNTMHTATNYGIAYITAFFISIDLDFWKRT AKKVIPNLHQFSTFYLTMSNIVYQYLVGTFLDILFIVVTVGITLYIFAFPNALLYAVILA LLNLFPYVGATFGLILIAIVGALSYPVFPFLAFAIVWTIQQIESNFIQPMIFNRTMHVRP ILTFVFIFLSEALFGVVGVILSPIFAAIAQIAFRSWLHSKTSDKIGEWEDIWQDFDEAMQ EENYD Prediction of potential genes in microbial genomes Time: Sat May 14 02:15:33 2011 Seq name: gi|312955993|gb|AENW01000026.1| Clostridium sp. HGF2 contig00038, whole genome shotgun sequence Length of sequence - 40504 bp Number of predicted genes - 36, with homology - 35 Number of transcription units - 15, operones - 7 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 148 - 195 -0.5 1 1 Tu 1 . - CDS 224 - 655 476 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 675 - 734 5.2 + Prom 948 - 1007 4.4 2 2 Tu 1 . + CDS 1028 - 2014 1074 ## COG0180 Tryptophanyl-tRNA synthetase + Term 2054 - 2087 1.4 + Prom 2071 - 2130 4.7 3 3 Op 1 . + CDS 2150 - 2863 853 ## COG3910 Predicted ATPase 4 3 Op 2 . + CDS 2914 - 3120 325 ## Apar_1167 GCN5-related N-acetyltransferase 5 3 Op 3 . + CDS 3175 - 3399 196 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 6 3 Op 4 . + CDS 3421 - 3861 247 ## COG4405 Uncharacterized protein conserved in bacteria - Term 4084 - 4136 13.3 7 4 Tu 1 . - CDS 4144 - 5016 975 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 5040 - 5099 3.9 8 5 Op 1 28/0.000 - CDS 5172 - 6485 1904 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 9 5 Op 2 4/0.333 - CDS 6487 - 7449 1348 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 10 5 Op 3 26/0.000 - CDS 7440 - 8846 1327 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 11 5 Op 4 . - CDS 8848 - 10767 2385 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 10871 - 10930 4.0 + Prom 10871 - 10930 6.6 12 6 Tu 1 . + CDS 10997 - 11887 923 ## COG0789 Predicted transcriptional regulators + Term 11917 - 11975 8.1 + Prom 12230 - 12289 6.3 13 7 Tu 1 . + CDS 12397 - 12663 88 ## + Term 12795 - 12826 2.7 14 8 Op 1 36/0.000 - CDS 13274 - 15178 1979 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 15 8 Op 2 4/0.333 - CDS 15180 - 15929 324 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 16 8 Op 3 40/0.000 - CDS 16015 - 17022 819 ## COG0642 Signal transduction histidine kinase 17 8 Op 4 . - CDS 17019 - 17687 567 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 17723 - 17782 3.6 - Term 18000 - 18044 -0.3 18 9 Op 1 3/0.333 - CDS 18220 - 20388 2168 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 19 9 Op 2 . - CDS 20438 - 22606 2150 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 20 9 Op 3 . - CDS 22622 - 22933 554 ## gi|160915592|ref|ZP_02077803.1| hypothetical protein EUBDOL_01602 21 9 Op 4 29/0.000 - CDS 22939 - 23871 855 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 22 9 Op 5 . - CDS 23871 - 24302 618 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 24342 - 24401 7.8 23 10 Tu 1 . - CDS 24497 - 25531 209 ## PROTEIN SUPPORTED gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase 24 11 Tu 1 . - CDS 25708 - 27282 1787 ## COG0038 Chloride channel protein EriC - Prom 27303 - 27362 7.2 - Term 27436 - 27467 1.8 25 12 Tu 1 . - CDS 27518 - 31864 5001 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) - Prom 31884 - 31943 3.4 - Term 32113 - 32155 5.0 26 13 Op 1 . - CDS 32245 - 32637 404 ## Hore_04000 FMN-binding domain protein 27 13 Op 2 . - CDS 32627 - 33118 526 ## Hore_03990 flavodoxin 28 13 Op 3 . - CDS 33209 - 33826 481 ## COG1309 Transcriptional regulator 29 13 Op 4 . - CDS 33816 - 34466 640 ## Cphy_1841 hypothetical protein 30 13 Op 5 . - CDS 34454 - 34942 472 ## Cphy_1840 multimeric flavodoxin WrbA-like protein - Prom 34976 - 35035 6.1 - Term 35131 - 35181 3.3 31 14 Op 1 . - CDS 35241 - 36197 1097 ## COG0530 Ca2+/Na+ antiporter 32 14 Op 2 . - CDS 36258 - 37445 1131 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 37485 - 37544 5.7 - Term 37838 - 37873 -1.0 33 15 Op 1 8/0.000 - CDS 37926 - 38624 247 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 34 15 Op 2 . - CDS 38608 - 38976 378 ## COG1725 Predicted transcriptional regulators 35 15 Op 3 . - CDS 38994 - 39191 291 ## gi|293401009|ref|ZP_06645154.1| hypothetical protein HMPREF0863_01294 36 15 Op 4 . - CDS 39191 - 39973 878 ## SP_1715 hypothetical protein - Prom 40063 - 40122 5.1 Predicted protein(s) >gi|312955993|gb|AENW01000026.1| GENE 1 224 - 655 476 143 aa, chain - ## HITS:1 COG:lin2295 KEGG:ns NR:ns ## COG: lin2295 COG1393 # Protein_GI_number: 16801359 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 1 119 1 119 131 135 53.0 2e-32 MIILYTSPGCASCRKAKQWLKDNDMKYIEKNIFTTLLKEDEIKYLLQRTENGTEDIISTR SKAFQELHRDLDDISIKELVDIIQKNPSILKRPIMINEKSFVVGYDDDEITALVPAKLRL TAQQACNPSCANYPICGRVREEA >gi|312955993|gb|AENW01000026.1| GENE 2 1028 - 2014 1074 328 aa, chain + ## HITS:1 COG:lin2301 KEGG:ns NR:ns ## COG: lin2301 COG0180 # Protein_GI_number: 16801365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Listeria innocua # 2 325 3 325 331 366 56.0 1e-101 MKRMLSGIKPTGRLTLGNYIGAIRNFVAYQDDYEMYVFIANMHAITVPQERAELKKNTKD LIALYLAAGLDPKKATIFLQSDVHEHAELGWIMTCNSYMGELQRMTQYKDKTAKGETGIT AGLFTYPSLMAADILLYDADYVPVGLDQKQHVELTRNLAERFNNRYGDTFVIPEPLVSKV GAKIYSLQDPTKKMSKSEENPKGTIDLLDEPAVARKKIMSAVTDSLGIIQYDPEHQPGVS NLLTILSSLNGESIESIIERYKGKGYGDFKKEVGAAVFDFLSELQAKYKEILSSGMVEKV ITEGNEKARRSAHKKLMKVKKKVGFQLF >gi|312955993|gb|AENW01000026.1| GENE 3 2150 - 2863 853 237 aa, chain + ## HITS:1 COG:MA0995 KEGG:ns NR:ns ## COG: MA0995 COG3910 # Protein_GI_number: 20089872 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Methanosarcina acetivorans str.C2A # 5 233 10 251 251 202 44.0 5e-52 MHSLFLREVSIDWDAVSDYTQHIAALHSFDRLAFQKQITFFTGENGSGKSTLLEAIAVAY GFNPEGGTKNYRFYTKDTHSSLHEGIHLSRGFCQPSCSYFLRAESFYNLATKAEEYASIY QGRELHSCSHGESFLSFIQSFRDIGLFLLDEPEAALSPQRQLTLLIQLSTMAWEGSQFLI ATNSPILLGIPNAQILSFDDGIIEEITYEQTASYQITEMFMNNREYMLDKLLQENEK >gi|312955993|gb|AENW01000026.1| GENE 4 2914 - 3120 325 68 aa, chain + ## HITS:1 COG:no KEGG:Apar_1167 NR:ns ## KEGG: Apar_1167 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: A.parvulum # Pathway: not_defined # 1 68 1 68 291 80 48.0 1e-14 MITLRKVDKRNIWSIVRLKVHDEQQSFVATNTESMLQAYTTMTEGGVALPFGIYDEESLI GFVMFGYG >gi|312955993|gb|AENW01000026.1| GENE 5 3175 - 3399 196 74 aa, chain + ## HITS:1 COG:SP1019 KEGG:ns NR:ns ## COG: SP1019 COG0454 # Protein_GI_number: 15900890 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 71 85 155 159 63 42.0 8e-11 MIDKAWQGKGLGKQALQTSIDFVKTMPCGKAEFVWLSYEAENTAARALYYAAGFHENNEL CDGETVAVLRLKEA >gi|312955993|gb|AENW01000026.1| GENE 6 3421 - 3861 247 146 aa, chain + ## HITS:1 COG:CAC1000 KEGG:ns NR:ns ## COG: CAC1000 COG4405 # Protein_GI_number: 15894287 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 21 145 32 157 157 110 45.0 6e-25 MGILSERGASFPLPPHINQEAFHFELTQTLADSQLKLVLDNIKRATASSLYAYEIQQERL PQVNDFNILTDWAGTPFCVIKTTAVTILPFHKITFALCMREGEDDTLESWQKTHRAFFTK EGNALGYSFCEDMPVVFEDFEVVYRR >gi|312955993|gb|AENW01000026.1| GENE 7 4144 - 5016 975 290 aa, chain - ## HITS:1 COG:SPy0280 KEGG:ns NR:ns ## COG: SPy0280 COG1968 # Protein_GI_number: 15674457 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Streptococcus pyogenes M1 GAS # 1 282 1 275 279 226 48.0 3e-59 MFLFDMIKAVLLGIIQGITEWLPVSSTGHMILFNSFFPMSSSLAKPDTPEFAFWGLFLVV IQLGSILAVCVLYFHKLNPFSSRKSISEKRSTWDLWFHVLVASIPGIIGIFLNDYVEKYM NNAIVVAIALIVFGIGFIVLESTKHHPKYRRVGEITYQTAFLIGLFQLIAALVPGTSRSG ATILGASILGCSRFAASEFSFFMAIPAMAGASGLKFLKYFMHYGFSMSGGNIALLVVASI IAFVVSMFAIRFLMNYIRNHDFKIFGYYRIVVGVAVLICYFLGVLNLSAI >gi|312955993|gb|AENW01000026.1| GENE 8 5172 - 6485 1904 437 aa, chain - ## HITS:1 COG:BS_murD KEGG:ns NR:ns ## COG: BS_murD COG0771 # Protein_GI_number: 16078584 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Bacillus subtilis # 2 431 9 447 451 292 38.0 1e-78 MKEHVLVIGAAKSGVAVAKLLQRHGYDVTITDMNAIRELEELQTLGIHVFEKGHPEELKR ENYAFVVKNPGIKYTVPFVRYFVEHKVKILTEVEIGYRYATKFKYGAVTGTNGKTTITTM LYEMLKYNHKAIVAGNIGWPLSELALAYEDEEKDVALELSNFQLLGIEHFAPHVSVVCNL APDHLDYMPSVESYYESKMRIYENCTEDDWFLRNVDDATVMQYAQHIPCKVIDFSLTRQD VDLYRKDGTVYLHELALFEEKNFHVVGDYNLSNAMIASCMAYKLGVSVSDIQKAIAAFSP VEHRLEYIGEKNGVKFYNDSKATNTHAVAAALNSFDKNIILLAGGHDKGISFEDLKQYDE RVKLCVAFGETGPQFQDIFSCVQVVETMQEALDAAVANSKEQDIVLLSPACSSYDQFPNY EVRGALFKEMVRKWLQA >gi|312955993|gb|AENW01000026.1| GENE 9 6487 - 7449 1348 320 aa, chain - ## HITS:1 COG:BS_mraY KEGG:ns NR:ns ## COG: BS_mraY COG0472 # Protein_GI_number: 16078583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 1 319 2 322 324 254 48.0 2e-67 MEIKYLLAFGISLVATLVVMPLLIPFLHKIKFGQSIRKEGPQSHMAKTGTPTMGGLVFVS VPILVMLVLDYKAFFSGEMLICVLAYLGYALIGFIDDFLIVVKKNNDGLKPSVKFLMQSV LAVVFYLFYRSIAETTLILPVVHISLELGILYFVLIFFMFTCESNAVNLTDGLDGLCAGT SIIAIAPFVIFALLQGNKDLAMLLLAVCGSLLGYLRFNVHPAKIFMGDTGSLAIGGLLAA SAMILKQELLLVVIGGVFVMELLSVVIQVTSYKATKKRVFRMAPLHHHFELGGMKETQVV LMFWSIGVVLAALGLWLGVM >gi|312955993|gb|AENW01000026.1| GENE 10 7440 - 8846 1327 468 aa, chain - ## HITS:1 COG:FN1225 KEGG:ns NR:ns ## COG: FN1225 COG0769 # Protein_GI_number: 19704560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Fusobacterium nucleatum # 13 466 19 481 485 249 34.0 9e-66 MFALLHIDCEDARILQGISDDTRDVKKDWLFVCRKGSLYDGAAFLQEALDKGAVVLCDQM LPMQHVYYTPHVERITQALLELYYGDLCTRLHVIGITGTNGKTSVASIISQLLKMEGCRV LQIGTGSVRYPDEVIEIHNTTPGCFQLANYFRRAHDEKITHVVMEVSSHAIDQNRISFLH FDDIVYTNITQDHLDYHLTRVHYRYTKFKLRRYLKPQGTIVYNSDLSYMQELVNLAQHAC ISIGMQAAHFPLHHVELSDHDLSFRLQGYDFHARLLGMVNVYNLAEAIVVVHRLGFSYER LRKDCEKLLPVSGRMEVMEVGGFTIWIDYAHTAAAVEELLVFANSVKKGRILTILGCGGE RDRTKRPAMAAIAAKYSDLAVFTSDNPRGESVDRILADMKCESFPNAAVFENRYFAIKHT IKVAQNSDIIIIAGKGSEETITAFGQEYPFSDRSCVKERLAKEELLWK >gi|312955993|gb|AENW01000026.1| GENE 11 8848 - 10767 2385 639 aa, chain - ## HITS:1 COG:BH2572 KEGG:ns NR:ns ## COG: BH2572 COG0768 # Protein_GI_number: 15615135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Bacillus halodurans # 6 636 8 639 644 594 47.0 1e-169 MIRGKVKTRISTIFLCCILIFCCILGKLGYEQIFHHTDIMEKALSLWERDFTVAGLRGSI LDKNGNVLAHDIPSTSVMVVPAQIQDADKTAQQLADVLQADKKKILSTITKHVSTQKLQP EGRLISDDKARKLEAMDLPGVYLVQDSLRNYPNNNYLAQVLGFTGIDNQGLAGLELQYND ILSAKSGALNIPFDAKGHNVELYKESYEAPGRGMDVQLTIDSNIQDIVERELNNLVKRYK PKSALALAMNPNTGEILAMVSKPDFDPNHYKDYSSDVYNRNLPIWKSYEPGSTFKSVTFA SALELKLFDMFKDTYYDRGYEMVGGARIKSWKAGGHGQQTFLQVLENSSNPGFVEISRRM GLDNEYDFVKKFGFGEKTGIDLPGESKGIMFKKSAMGELEQATVAFGQGLSVTPIQLVTA FSAIINGGTLYTPYITKSINDPITHDAILEYKPTAKRKVISEDTSKKMRYALESVVANGG GKPAYTEGYKIGGKTGTAQIAENGVYSTSNYILSFLSAAPIDDPQIVLYIAADSPQNDVL YGGTVIAPVAKACYEDILPYLGVKKAEEQIPKKLVWPETENIKVQDFRGKKKKDVAQEGV TFTFIGSGDTVMEQMPEAGTTLSAEGGEVWIYLGNDKVK >gi|312955993|gb|AENW01000026.1| GENE 12 10997 - 11887 923 296 aa, chain + ## HITS:1 COG:CAC3475 KEGG:ns NR:ns ## COG: CAC3475 COG0789 # Protein_GI_number: 15896713 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 288 3 243 243 143 34.0 4e-34 MKTVKEVAALTGISVRTLQYYDEIGVFKPTSLTEAGYRLYDEEALKTLQQILLFRELDFP LKEIKRIMTQKEYDQAEAFQKQKALLIKRRDRLDRLLSLLDKLEKGESCMEFEDFKLQSY LQLLEQFKAEHTEEIMQQWGSIAAFDDIIAHIREHEADIAKTAVEYYGSTAAYTDAMKYN LEHFSEIMEKLEHIRQQNYGKRNQQLMEKLLQDTTRDPASAQVQQIIYDMQHLIPEEEAC GSNPGMHQQKLLIDSYLHNEALIQQTDQRYGRGASRFMGKALRIYFDKEDAAKKQR >gi|312955993|gb|AENW01000026.1| GENE 13 12397 - 12663 88 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYIQLKTNSTVRNNKQATQRKKPLAAKDEQEKLIKEKFTEEEVKELLKEGFTMEQIAYVA KDKIKGDKQCRIIGIIFDILTWFIPVFK >gi|312955993|gb|AENW01000026.1| GENE 14 13274 - 15178 1979 634 aa, chain - ## HITS:1 COG:lin2220 KEGG:ns NR:ns ## COG: lin2220 COG0577 # Protein_GI_number: 16801285 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 622 1 638 646 151 24.0 3e-36 MQILRLSIANFKRNIRFYLSYILSLSFSAFILYDFLALMDSGLLEIMGKKNQEFSDMILV SMIVVLLFFVFCFLWYATNVFLNLRKKEMGTFIFMGLDQKEISRMYTLEMLLAALSAVLT GIGAGVVFFKLFAMLFFQLSGMEADISMQFSFVSALQCAAAFLILYLLLAIKGYFSIIKT SIRDMLEATRQREVVRATGLRALLSSLLFSTLLIGGYFCAMQIGEMDSFSYMLLAVVLVI AGVYGLYRSLFPYLLQQLSIKKGFLYRKQRTLWINNLVFRVKKNYRTYAIVTIMMLCSVS ALNAGLAFKQRYDAMAAGEGQFSYILLSTQPIPTEDLNKAAAAFGNMEYQAVLQGFPYTY EDENHLIYTDMVLSYTDYETYCKSIHKQVFAREPKPGNGLCLSKKYLISMADEVEDIVPF PRRSIHIQEKSEEYYFGIMQNNMNFIILNDEDYQAVINEKTQYMHMQMVQMDTAVDIKEL RKTLAPLCDEQISAMGVDPENDDLAFVRVMYAACVFMFLVFVVSCGGVIFMKTCNDADDD YGRCQILKNIGISKQDMKKAIHRELGFTYIMPLLLTAISSVFIIHAIERVMRTKTLLPIN LLTLAVVFLFDLMLYLISVQMYEKRCGLADEKQR >gi|312955993|gb|AENW01000026.1| GENE 15 15180 - 15929 324 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 203 1 199 223 129 36 3e-29 MNEIMKIRNLSKIYGKKEVRTTVLNNLSLDIEEGDFIAVMGPSGAGKSTLLNLLSTIDKP TQGSIILDGQELTAIRNEKLAKLRKEHIGFIFQDYNLLDNMTLMDNIALPLSLSNEKAKN IQQRVQEMAGLFHLEGHLEKYPHQLSGGQKQRGAAARALIRNPRIVFADEPTGALDSKSS RELLCSLKEINEERNATILMVTHDAFSASYARKVFMLKDGEIFTTLHADAERSVFYERIL QLLASMGGD >gi|312955993|gb|AENW01000026.1| GENE 16 16015 - 17022 819 335 aa, chain - ## HITS:1 COG:lin1852 KEGG:ns NR:ns ## COG: lin1852 COG0642 # Protein_GI_number: 16800919 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 92 330 100 341 346 129 31.0 9e-30 MKGWLKDRRLCICILLALLIIYHLYFLWLSSVKMELSELLYADFMLLVVIGVCTVSDWYR WLKKTEGWQNAMQTASYVLSEELDDTGELQTVLAHNEQEYLREQKEHYMQQQELQDYISR WSHEIKLPLAALRMMNERNTDAALQKDMQKQLEKMERQLHMMLCTAKAWMPAGDRSIMKI ELKKAIQSAVKNASYFLIHEGFEIQIEDSVDILVLSDEQWLVYMLDQLISNAVKYHKEHP VLTFFCEVREYAVLHVRDNGIGIRQEELSAVFERGYTGRNQRNGAYRSTGMGLYFVRKIA DLLGHTVTITSREQDYTDIQITFSHDGDFFHLTDL >gi|312955993|gb|AENW01000026.1| GENE 17 17019 - 17687 567 222 aa, chain - ## HITS:1 COG:CAC0224 KEGG:ns NR:ns ## COG: CAC0224 COG0745 # Protein_GI_number: 15893516 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 221 3 222 223 188 42.0 5e-48 MKILIAEDDEVLAREIQMACTRWGFTVDTVQDFQQIAETLAQLKPDLLLLDINLPYYDGF YWCETIRRCSMLPILFISSRDQDQDKIMAMMSGGDDYLQKPFSLPLLMAKLQALLRRSYE YVGHTVIVLHESLCYDLDKGVLQYGSQEIVLTRTEHKILQILARNRGSIVSREELMMQIW STDEFISDGSLTTGISRLKAKLRLYSDEDLIQTRKKQGYLLI >gi|312955993|gb|AENW01000026.1| GENE 18 18220 - 20388 2168 722 aa, chain - ## HITS:1 COG:lin2145 KEGG:ns NR:ns ## COG: lin2145 COG0768 # Protein_GI_number: 16801211 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Listeria innocua # 13 721 8 713 752 364 33.0 1e-100 MKRSNRTLVMMLMAMGCITLLILSNILYTMTSARHFRTGMNVKEYKDGDIVKAEVLKAKR GSILDRSGEILAKDEDTYTIIAVLSKTRKDIGNQPAYVQDIDKTARLLAPKLGLEEAFLR KKLQEARDSNMYQTEFGEKGKYLSNSVKESIAALKLPGIEFQSSVKRTYPNSVFASHLLG FAQYDEAKKKITGQIGLEAALDEELSGTNGSKEYQKDADGNPLPGTEYTKAYAKDGDNVV LTLDRNVQQTLQSSLDKSVKKTSGGVRGWGIVMEVKTGKILGWASSPSFNLNSRDDIKDY VDLPSDFLYEPGSVMKGITYAAAVDSGHYPYNKTFDSDVYHFVEDSKGNIHRTNNANDQA IYDAEQYKHGTISFDKGFVLSSNIGICELLASYMEPSIYKEYLEKFGFLKSVNTPYLSNK PGEMQFTYALEKLSTGFGQAINVNALQMAQAFSAIFNDGTMMRPYVVDRIERSNGTVVKQ YEPKVVGKPISEKTSAYIQKLMKRVVDDKDGTARMYRMEDVDIIAKTGTGQVYGKQGYDR SLYTNSIMMAAPAKNPKVMVYYAFQASDYLNYDREPAKEVMRSALVAANITADKASLNEE KAYKGFRETQMPVLRNHSLSYALDKLKDTHTEQIIIGDGSEVMEQFPQPKETIISNQRVF LLSNGSRLTMPDMTGWTKKDITAFWKLTHIAVEMDGTGMVASQNIKAGKAINKDTVIQVK MK >gi|312955993|gb|AENW01000026.1| GENE 19 20438 - 22606 2150 722 aa, chain - ## HITS:1 COG:BS_pbpB KEGG:ns NR:ns ## COG: BS_pbpB COG0768 # Protein_GI_number: 16078580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Bacillus subtilis # 3 722 5 713 716 390 35.0 1e-108 MNPKRSNRTLVYMLLMIGIIGVVILSNVLFTMVTQKHLRTGTNVKEYKDPDISSSNVLKA KRGTIYDRNGEVIAQDEDTYKLIAYLNKNRKGIGNKPAYVQDITKTARLLAPKLGMDEKD IVDTLTRAQKNNQYQTELGDKGKNLTKEVKESIEALELPGISFEESVKRYYPSSVFASHL IGYAQFDEEKNTMVGKMGLESALNKYLSGKDGLEVYQQDADGNLLPGTKYTKTYATDGNN VVLTLDRNVQQTLQNSLDKSVKKTAGGVRGWGIVMEVETGKILGWASSPSFDLNKRDMKD YIDLPADYLYEPGSVMKGITYSAAIDSGKYPYNKTFDSGVFYFTESADGKIYRTNSGALK IKDALGENHGTITFDKGFVLSSNIGICELLTKYMEPSVYKNYVEKFGFLKPVNSPFLNNR GGTIFFDYASEKLSTGFGQAISVNALQMVQAYSAIFNDGKMVEPFVVDRIENANGKIVKQ YDTTIAGQPISEKTSKYMQKLMKRVVYDKDGTAAPYKMNDVEIIAKTGTGEVAGKNGYDG SLYTNSVMMAAPADDPKVMVYYAFQASDILSYDREPMKEVMRSALVAANITSDGESNNGQ KTYKDFKQSDMPSLLNHSLDYAKEKLEGTATSQVIIGNGSSVIKQYPEVGETIISNQNVF ILTDGSKITMPDMKGWTKKDITAFWELTHIEVEMSGTGRVTSQNIKTGKSINKDTVIKVK ME >gi|312955993|gb|AENW01000026.1| GENE 20 22622 - 22933 554 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915592|ref|ZP_02077803.1| ## NR: gi|160915592|ref|ZP_02077803.1| hypothetical protein EUBDOL_01602 [Eubacterium dolichum DSM 3991] # 1 101 1 100 100 101 61.0 1e-20 MAKAKIVKRKRRLRIEGLATLLLTLSIFGYFGAKFALKSYNITLQLKAQESEQKANTLKE DVANLEADITKLEDRDRVLGMAEKEGIKTNQDNVVVVDKDEKK >gi|312955993|gb|AENW01000026.1| GENE 21 22939 - 23871 855 310 aa, chain - ## HITS:1 COG:lin2147 KEGG:ns NR:ns ## COG: lin2147 COG0275 # Protein_GI_number: 16801213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Listeria innocua # 2 309 3 310 312 338 56.0 9e-93 MKHYSVLLHESIDNLAIHSDGIYVDGTLGRGGHSAEILARIPQGHLYAFDRDASAIEKSR ERLAQIGDNVTLIHSNFSNLKRELTARGVTGIDGMVLDLGVSSPQFDEAQRGFSYRFDAP LDMRMDQSQKLSAYQVVNEWEYQELVRIFFQFGEESFAKQIARKIEKAREVKPIETTFAL VDVIKSALPAKVLNKKGHPAKKVFQAIRIAVNDELGELQLVLRDALELLHVGGRLCVISF QSLEDRIVKDTFSSCSKPKQYDKRIPILPQDMEAAPYRLLNKKPITATEEELRENMRSHS AKLRCIERIR >gi|312955993|gb|AENW01000026.1| GENE 22 23871 - 24302 618 143 aa, chain - ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 141 1 141 143 169 58.0 1e-42 MFMGEYAHNIDKKGRIIIPAKFREELGDHVIITRGLDGCLAVYTKEQWETIYEQLMKLPS TKKDARMFVRMMTSKAAECEIDAQGRVLIPSPLVKLAELVKECMVIGAANHVEIWSRERW EPVDEEANDAFEDIAESLTEFMI >gi|312955993|gb|AENW01000026.1| GENE 23 24497 - 25531 209 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase [Legionella pneumophila str. Corby] # 109 340 112 346 601 85 26 6e-16 MKLVYKNLTICSKAEGSIPVCDTTCVPQLQENLMNSTLQLYLLLDTIYAGYMLVTLQSAR TVTIAMRLANIGKNFALLHRQYVYMLLFYVLYRWDIEQVMMEVDAKEQQLQENLVQLGFQ RIEYEQEHPAIAKTPLLYRLQKSDFNRTDNQDATELQKLSLEQLWELFPIVIRPYNEQYT AWYDAQQLHLQELLKASIVRMSHIGSTAVKGLEAKPCVDILLETDTRHPQKLIETLTRDG WILMSRKQEEQGDILCFNKGYTALGFTEKVYHLHVRYPAAWGELYFCEYLRTHDAVCRKY AALKKELAQTYRRDRDGYTQAKTECIEEITKLARAELSDKFIIK >gi|312955993|gb|AENW01000026.1| GENE 24 25708 - 27282 1787 524 aa, chain - ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 31 522 24 512 512 347 41.0 3e-95 MKERKHGSTLHILHSAGNFKYVLIGEGLAAGLCAGLIAVLYRIILGYAEDFVAAAVAFIR TDWTHIVLWFAFLLILGFLVAQLLKAEPLISGSGIPQVEGEIMSFIDQQWTRVLPAKVIG GTLCAFGGLSLGREGPSIQLGAMAGKAIAKLFHRVKMEERLLLTCGAAAGLAAAFNAPLA GVMFALEEIHKNFSVSVLISVMCASVSGDFLSRNVFGLAPAFHFEVLNTFPLGYYWMLIL LGIVCGLFGVLYNKSTMKVQALFAKSGLRHYGVMVAMLLSGVLALCLSDVLGSGHAMIEM LSENPVMMLRTLFLLLAVKFAFSLISFGSGAPGGIFFPLLVLGSFTGAIFGNIAVQVFGF SAGYMNNIIIMAMAGAFAAIVRAPITGIILIAEMSGTLTNLLPLAVVSLISYLCASLLNC EPIYESLLHNLLVKNGVNLSAFHGERHLVEAVVELGSPVCDQAICDVKWPNKCLLISIER QGKELLPKGSTVLHTGDKLIALLDDEDAPYIQHQLEKCCSSKLE >gi|312955993|gb|AENW01000026.1| GENE 25 27518 - 31864 5001 1448 aa, chain - ## HITS:1 COG:BS_polC KEGG:ns NR:ns ## COG: BS_polC COG2176 # Protein_GI_number: 16078721 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Bacillus subtilis # 19 1446 26 1437 1437 1241 46.0 0 MELKLIDLVRKMEQNNPDLEYFEQGTFTMKPVYMKKSNVIKMEISLPKPLPFQVWDVFCM RLTKLTRCSVDLHITAEKAEAELLEVSSYIERFVSRHMQLKIFHESLPTINEQKYLVYQI LDEQERDRAIQNKHLLQEFLERCGFQLEIHVEEMKKSAPIPTVTVKSEAAAKPVKVYEEK KSYNFKPKGKKGLDQYVPFSIHDITEECHGIRIHGKIFETETRTLRNGRDIQMLWIGDDD DAIIMKRFERGAVTKEVLAEIKNGDCVVAYGKAEYDAYTRELVFMPDVIEKVAEVKRVDE AEEKRVELHVHTKLSEMDGVCNIEEYIDQANAWGMDAIAITDHLVVQAFPKAQHKVEAIN KGRETPFKMIYGLEMNMVDPALQIVRNIQDIELEKGTYCVFDLETTGLSSRFDHIIEFGG QIVKDRACIKSLQLFIKPPVALSAFTTELTGITEEHMKNAKSFADSIDEILDFIGDSILV AHNATFDYNFLNDELARIGRPPIMNPVIDTLDLARSMQADRKGYRLGQIARSYGIRYDED VAHRADYDAEVLAQTYMNMLNDLKHIKNLQELQDMQTAESFRKVRVKHVTILAKNMAGLK ELFELVTLSHTSYLAYSSKSTNNIVAEPRILRSEIEKRRINGNLLIGSSCLNGEVFDMAQ TRNEQTLEEVMQFYDYIELQPLENYRHLVERDSISSMERLKEILTCIVKAADKLDKLLVA SGDCHYVQPGEKMIRDIYISSQAIGGVRHPLYIYNQEKRRKFKAPDQHFRTTKEMLKEFA WLGEQRAYDMVIKNTKRIADMIGEVKPVKDRLYPPDIEGSDQKLTDICYENAHKKYGPVL PEIVEKRLEKELASIIGHGFYVVYYISHLLVKKSLNDGYLVGSRGSVGSSFVATMSEITE VNPLAPHYVCPKCHYVKFYTDGSVADGFDLPDIICPNCGETIRGDGHDIPFETFLGFEGD KVPDIDLNFSGDYQPNAHAYTKEVFGDDHVYRAGTIGTVATQTAFGYVKGYEEEMGIEGS MRNAQVLHLAKGCEGVKRTTGQHPGGIIVIPLDLDVHDFTPVQYPANNPYAEWKTTHFEF HDIHDNVLKFDILGHVDPTAMKMLERMSGIDPTTIPMNDPETMSVFSKVDALKIDTSKSC EETGAAGLPEFGTPFVRGILELTRPTTFDELLKISGLSHGTDVWLGNAKDLIDNGTCTLK SVIGCRDDIMVYLLHKGLRPKLAFTIMESVRKGKGLKDEWIPEMKANGVEDWYIDSCLKI KYMFPKAHATAYVMMAIRIAWFKVHRPQVYYCMFFSIRCDAYDIETMIKGEQAIRRRMQE ISDMLKNNETKKDVSKKDKDTFNTLELALEMNLRGYYFTNIDIMRSASREFIVDPENANY IIPPFTSIDGLGENVADTVVEARRQGAFLSKEDLQRRTALSGTLVKKMESMGVLEGMQDE NQMSLFSF >gi|312955993|gb|AENW01000026.1| GENE 26 32245 - 32637 404 130 aa, chain - ## HITS:1 COG:no KEGG:Hore_04000 NR:ns ## KEGG: Hore_04000 # Name: not_defined # Def: FMN-binding domain protein # Organism: H.orenii # Pathway: not_defined # 1 126 1 126 127 78 34.0 6e-14 MKRKLIKALVVLILLGAGGIAYQFYQTKQQSDALAFEAVDMNRLQDGSYEGECQTGLVQV RLRLRIQNAAIQRIELLQHDNGMGKDAERILEDIQKQNSTVVDDVSSATISSRAIRMAAQ NALKKAALPQ >gi|312955993|gb|AENW01000026.1| GENE 27 32627 - 33118 526 163 aa, chain - ## HITS:1 COG:no KEGG:Hore_03990 NR:ns ## KEGG: Hore_03990 # Name: not_defined # Def: flavodoxin # Organism: H.orenii # Pathway: Porphyrin and chlorophyll metabolism [PATH:hor00860]; Metabolic pathways [PATH:hor01100]; Biosynthesis of secondary metabolites [PATH:hor01110] # 1 138 1 145 159 70 30.0 2e-11 MKTLIIYKSKHGTGKEVAAYLQQKLCADLQEADPALSWEGYERIVCVGSIYAGRLAKQLL ACIRANTKELAGKSVGMLLCGMSDAAPEKIITENLGEACYRQLAFSVNIGGRLDFQKLGF LERKIIRMVNKQEHLYEDKDAVLVDRLRWDTIDSVIAGQTHEA >gi|312955993|gb|AENW01000026.1| GENE 28 33209 - 33826 481 205 aa, chain - ## HITS:1 COG:CC2204 KEGG:ns NR:ns ## COG: CC2204 COG1309 # Protein_GI_number: 16126443 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Caulobacter vibrioides # 13 181 24 184 215 64 29.0 1e-10 MRVKDEEQIASRRALIMRAAREIMETQGMEALSIRKIAAMIQQTPGIIYHYFSGKEELML AVVQEGYQHILCIIQQTMASEKSPAAQLRATLFGYVRGMLENPLLYQVVMQSKLPSVQKQ TAILQENLRQHRKSIAMLCTCLEEGIACGEFSVEQVELRAQGIWCCVYGLLERILIEQPV PAYRDKVIEEVLDLIMASLRPHETA >gi|312955993|gb|AENW01000026.1| GENE 29 33816 - 34466 640 216 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1841 NR:ns ## KEGG: Cphy_1841 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 2 197 3 202 218 119 35.0 1e-25 MSILILNLSPRRLGTSALLGRLMQEQLGEQTQLWSCLDIEAAWDSFLEVAGLADTWIFIT PCYVNAIPGDAVEVLAKLHQAELSRNKYVYAIAQGGMPYTHTHHCCIGNIELFAKAMQLR WMGGLVIGGGAIIDGVTLKRLPNAVLVEHCLQKLIACIQHKTEVASLLSKQAEMKIPGFV ARLMCLKMNYTIHKQQKKIKADRHICFYAKEEKHAR >gi|312955993|gb|AENW01000026.1| GENE 30 34454 - 34942 472 162 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1840 NR:ns ## KEGG: Cphy_1840 # Name: not_defined # Def: multimeric flavodoxin WrbA-like protein # Organism: C.phytofermentans # Pathway: not_defined # 20 108 29 115 179 63 31.0 3e-09 MRTLRLNDTEYAFCDELGMETVDVRELKLQGCMGCGACERRIHHGGECAVADDMQMLYPK IAQCEKLVFICRQSFGCCSPKCKRILDRMAVLGYPEYTVKNRELTKKGWKIPLREIEFLL YGEATPQELALFEEWLEEIHGITGGTLMRVQYIGEEAALCPY >gi|312955993|gb|AENW01000026.1| GENE 31 35241 - 36197 1097 318 aa, chain - ## HITS:1 COG:BH2867 KEGG:ns NR:ns ## COG: BH2867 COG0530 # Protein_GI_number: 15615430 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Bacillus halodurans # 1 289 1 295 330 122 31.0 9e-28 MLYLEYIVLAALVVFLSVRLSYYVDCLDKKTNLSGAFIGGVMLAAVTSLPELFTSLTAVL ALDQPDLVQGNVLGSNIFNLCVIGGLMLFTSRRYQRATLSKSHSKTLLFGLVMYALVFAA IMMPKEVGFSFLKVNLMSILILLVYAVNVKFMGNDDSGDVEEEVYISLSVRQIAVRFICY SVGLVIVSILLTTVTDRLAEELQLGATVAGAIFLGVATSLPELSASVNLVRIGNFNASFG NIVGSNLFNFIILCFADVLFTQGSIYVNESQVMNLLGFGAFSMVCTLVVIYGKKHRALVL LASVAILGSYVTSILLSM >gi|312955993|gb|AENW01000026.1| GENE 32 36258 - 37445 1131 395 aa, chain - ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 3 389 2 381 384 317 41.0 4e-86 MKYDFDTVLSRTGTGCIKWDKPFACSDEQTVLPLWVADMDFPCSTEIQEALHRRVEEQIY GYSCGFDDAYRNSVTGWFQRRFQWTIAADSIFYAGGVVPAIAYLLEILSEEGDSILIQPP VYYPFRNKILATRRCVVESPLCITDGVYTIDFADLEEKLAADEVKGMILCSPHNPVGRVW SKEELQQVADLAHIYGKWIISDEIHCDLIREGIHHIPLHTLVPEYKDEIIVCTAPSKSFN LAGLQNSNIIITKPEYQQRWKEFVGNRLSLNSCNSFALAATKAAYNESEDWLNQVNSYID QNIRYACDYLEKELPQAVVSPCEGTYLLWVDVRAYCPDERQLEKRMRQQSLILDEGYLFG AQGKGFERINMAAPRSLIEECMRRFVKAVSGEAIE >gi|312955993|gb|AENW01000026.1| GENE 33 37926 - 38624 247 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 222 1 231 305 99 28 2e-20 MEKLIEISGLSKAYGKKQALHNVDMVFEGGQIIGLLGPNGSGKTTLLKVMTGLLKDYDGV VKIDGTCIGAETKAMVSYLPDEPYFSDWMKVKDALAIFVDMYADFDLDKCLTIMRRFQID DGMRIKTMSKGTKEKFQLALVMSRKAKIIVLDEPIGGVDPAAREVILDTILENYSPEQTI LIATHLIADIERIFSTVVFIKNGQIVLNSEVEDVRQETGKSIDELFREEFRY >gi|312955993|gb|AENW01000026.1| GENE 34 38608 - 38976 378 122 aa, chain - ## HITS:1 COG:SP1714 KEGG:ns NR:ns ## COG: SP1714 COG1725 # Protein_GI_number: 15901548 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 3 114 5 116 121 108 46.0 3e-24 MNFDSKMPIYLQIMDEIKRWIVTDVYQPSQKIPSVRELAVEFGVNPNTVQRALSELERSG LVASERTSGRFICNDTEMIRKLKEDVICRKTDMFIEEIRQYGCDDEAIIATVEERLHNGK AD >gi|312955993|gb|AENW01000026.1| GENE 35 38994 - 39191 291 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401009|ref|ZP_06645154.1| ## NR: gi|293401009|ref|ZP_06645154.1| hypothetical protein HMPREF0863_01294 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 65 1 65 65 70 70.0 5e-11 MNDLKERALIILIILLFSFWYVFTGYLLLDYFRIGWPIYIVGALLLGIIIIAVLQTVKRM KNGEY >gi|312955993|gb|AENW01000026.1| GENE 36 39191 - 39973 878 260 aa, chain - ## HITS:1 COG:no KEGG:SP_1715 NR:ns ## KEGG: SP_1715 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae # Pathway: not_defined # 1 259 238 491 492 89 26.0 2e-16 MFWKLCKHELKCSYRSFLVLYAIVMVAALLMNPRNEGMITNIAAIVYIIMSVVMFIMCVV VIIKNYSNSMFSRNSYLTHTLPVTSTQLLLTKILSAVFWIIVSVFVLFLSMLIIGLRVSG FDFSAITETLQQFFSTVIAVDSLLYLFYMIVGTAESVALVYLVMNITHTTYVPRYRTAVA ILLYILISWILSFVFDRILLAPFHLASDDFAGTIMGMFMGMQVEYQFMAGVGIMIVKSLL LLSLFFFGSKYILDHKLEIE Prediction of potential genes in microbial genomes Time: Sat May 14 02:16:06 2011 Seq name: gi|312955990|gb|AENW01000027.1| Clostridium sp. HGF2 contig00011, whole genome shotgun sequence Length of sequence - 2611 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1704 669 ## CPF_1087 pullulanase family protein - Prom 1750 - 1809 2.6 Predicted protein(s) >gi|312955990|gb|AENW01000027.1| GENE 1 3 - 1704 669 567 aa, chain - ## HITS:1 COG:no KEGG:CPF_1087 NR:ns ## KEGG: CPF_1087 # Name: not_defined # Def: pullulanase family protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 457 555 2409 2507 2638 93 50.0 3e-17 MKEVENVKKKVGSLLLAVVMIVTALPVFGTKVHAAELPDSTQFATVDELKAFNTNDQDGE NPAKVYFGNNNQRWWIAGTQHNNLILFAADVLDKGIPFELDVSNDKSDITEWEDCTYVDG VSPQSVYPSHYGASDIRKMLKSLETSYFTNSEQQLMNDTLIYTYDGKNDEAYSVSDKLYL AHGDRSATQYLTVGANEFDNLNSGLRIDKGYWGAKTDPVFWLRATPPKNITDDITALEAW PTARIINNKVSNGDKRGVKPAFELNLSSVIFASAVPAVASDGNLSINDTFTLRHSTNNLG SALVVYDKSKVILTNVPNGTYLVVQNSDGAKAKQITNETKISANDMNLDSFANCQIWLER TDTVNRMTYAILATEGQVYDVNVVGNDGLTVTNGTQGVAQGTAISDIIVEVANGYYLPDD YSDSIQGLNGLSVTNMTKNSFTISGTPTGDVNITLPAAAVLPKDDIPQVELNHVPTINAS DKILTVGDEFVPLKDVTASDKEDGDITRKVEVLSNDVDVLRAGTYTVTYRVTDSKGASST KTITVTVKGKDTQKPTIDDNKKPSITD Prediction of potential genes in microbial genomes Time: Sat May 14 02:16:18 2011 Seq name: gi|312955974|gb|AENW01000028.1| Clostridium sp. HGF2 contig00067, whole genome shotgun sequence Length of sequence - 16856 bp Number of predicted genes - 14, with homology - 12 Number of transcription units - 8, operones - 4 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 4 - 1839 2430 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 1865 - 1924 7.1 + Prom 1818 - 1877 6.8 2 2 Tu 1 . + CDS 1967 - 3280 1358 ## COG0726 Predicted xylanase/chitin deacetylase + Term 3510 - 3548 -0.9 + Prom 3548 - 3607 8.5 3 3 Tu 1 . + CDS 3686 - 3883 144 ## Sfum_2328 hypothetical protein + Term 3891 - 3923 -1.0 4 4 Op 1 . + CDS 3994 - 4524 301 ## 5 4 Op 2 . + CDS 4560 - 5315 978 ## COG4947 Uncharacterized protein conserved in bacteria + Term 5317 - 5345 -0.1 + Prom 5455 - 5514 8.1 6 5 Op 1 . + CDS 5538 - 6770 1126 ## COG0477 Permeases of the major facilitator superfamily 7 5 Op 2 . + CDS 6790 - 7881 1120 ## GYMC10_1402 transcriptional regulator, ArsR family + Term 7951 - 7987 2.3 + Prom 7962 - 8021 7.1 8 6 Op 1 . + CDS 8182 - 8589 537 ## CD3166 putative transcriptional regulator + Term 8603 - 8647 0.3 9 6 Op 2 . + CDS 8661 - 8951 270 ## + Prom 9611 - 9670 9.0 10 7 Op 1 4/0.000 + CDS 9722 - 10255 582 ## COG1396 Predicted transcriptional regulators 11 7 Op 2 30/0.000 + CDS 10269 - 11846 2208 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 12 7 Op 3 8/0.000 + CDS 11848 - 12696 924 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 13 7 Op 4 . + CDS 12693 - 14588 2228 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 14632 - 14668 -0.9 + Prom 14725 - 14784 6.3 14 8 Tu 1 . + CDS 14952 - 16583 993 ## Lebu_0003 protein of unknown function DUF1703 + Term 16757 - 16803 7.3 Predicted protein(s) >gi|312955974|gb|AENW01000028.1| GENE 1 4 - 1839 2430 611 aa, chain - ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 4 600 6 602 605 625 54.0 1e-179 MNEKEKIINIAVIAHVDAGKSTLVDAFLRQSDVFRSNEEVVDCVMDSNDLERERGITIYS KNCSVIHDGVKINIVDTPGHADFSSEVERIIKTVDAVILLVDSSEGPMPQTRFVLSKSLE MGLRPILLINKIDKKDARPQEVVDEVYELFLDLNATDAQLDFPILYGVAKQGIVQYDMDT PSDSIEPLFKTILKHCEAYPDLDEEPLQMQISALAYDEYIGRLGIGRIYQGVLNAQQSVV ICDSFGHERTNTTSQVFVYRGLSRVSVKEARSGDIVVVAGIPDIMIGETLCEKDHVMPLE SIHVEEPTLSMNFIVNKSPFAGKSGKYVTSRNLKERLEKELEVNVGLKVEPTDSGDCFKV SGRGELHISVLLEQMRREGYEVAVSKPEVILHKDENGKTVEPVEEVVALAPEEYSGTIIN KLNLRKGVMVDMVEENGYCRITYEAPTRGLLGYRSEFINDTRGEGTLVRRIKGYTPYKGE ITQRANGAMISTETGGAMTYALWNLQERGSLFISPQTEVYEGMIIGESARNVDMDVNPLK NKKLTAIRSSGNDEAMRLTPPRDMTLEEALEWINDDELVEITPDSIRLRKKGLKPHERRQ YYRERVSDEVK >gi|312955974|gb|AENW01000028.1| GENE 2 1967 - 3280 1358 437 aa, chain + ## HITS:1 COG:lin0436 KEGG:ns NR:ns ## COG: lin0436 COG0726 # Protein_GI_number: 16799513 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Listeria innocua # 249 428 268 446 466 178 46.0 2e-44 MNVRRIVCPFLCLLLLCGCRCEKLDENKNPNQEIGTTVQDIQYKDTYLESIMYPKTDIAK LDKKIKDTVDTYQKHFLEAVKPYKEKRKAEFNITWQSFYKDDRYVSVKLAIYQCIYQKQE YVETIVYDTKKQDFLHLYDIFDADRIQLLSAKASDYFQKRFPKECDNDRFRTHISAVEDN FDRFVLKKDRMVFYFPQKTLFDEAATFECGYDSLGDAVDLKNEAQQTIVPYEDILNEPIK NIDPNKPMIALTFDDGPSKRYTPAILDALKEYGANATFFVLGSNADNFPDILQRMVLEGN EIGNHTYSHKQLTTLSKENIEEEIIATQESIYDITHRYPDVIRPPYGSKNKTVMDCAKGK RIVTWSLDTRDWHDRDAKVVVERLLKQVQDGDIILMHDLYASTASAVQELVPRLQEQGYQ LVTVSDLYTYSRHIRHS >gi|312955974|gb|AENW01000028.1| GENE 3 3686 - 3883 144 65 aa, chain + ## HITS:1 COG:no KEGG:Sfum_2328 NR:ns ## KEGG: Sfum_2328 # Name: not_defined # Def: hypothetical protein # Organism: S.fumaroxidans # Pathway: not_defined # 5 64 25 84 385 64 50.0 1e-09 MKLNGINTLGIGYEPYEELRIEVRHALQDYIQIQQYQSYDAALRAAAFFTYRYGRLNGME SFQEG >gi|312955974|gb|AENW01000028.1| GENE 4 3994 - 4524 301 176 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWCTVTPARRALSLPQAQELLFAQKHGALYNVQKEQLYAYEDAKKLADAWKYGCQQLLVP KMEGSLYIWEALLDHTGASRATAAGRLSGGKQYRISKEEEKELTVFAQEACAKLCADEWS CGFLHMLIWKRQGHWELLDIRSGADRCVLLKEYPDIYQLWADGMCEEMERASAQKK >gi|312955974|gb|AENW01000028.1| GENE 5 4560 - 5315 978 251 aa, chain + ## HITS:1 COG:mll2788 KEGG:ns NR:ns ## COG: mll2788 COG4947 # Protein_GI_number: 13472478 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 1 247 10 254 267 218 42.0 8e-57 MNVEYYKELSHELNRDMEFKVYGHTGIPCLVFPAQNGRFYDFENFGMIDAAHEYVDAGRI QFFCCDSIDNETWSNVDGNPRERMEQHERYYHYIIDELIPRIQEISTYANSGKEPHDMMT CGCSLGAFHALNFFLRRPDLFNRVLAMSGLYHADYFFHDYHDELTYRNSPSDYLPNMPQD HPYMELYRNSEIVLCCGQGAWEQEMENSMHQMEAIFADKHIDVWIDFWGYDVSHDWYWWK KQIDYFLQFMV >gi|312955974|gb|AENW01000028.1| GENE 6 5538 - 6770 1126 410 aa, chain + ## HITS:1 COG:TM1336 KEGG:ns NR:ns ## COG: TM1336 COG0477 # Protein_GI_number: 15644089 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermotoga maritima # 12 237 3 228 390 95 25.0 2e-19 MEQGYRQIFKQREFMKMTGANFINRFGDSIDMIAFTWLIFELTGSASWSAIMLGVNMIPN VLVQPFAGAIVERMEKKNIMIACDILRGILTAGIAVLYMLSALQPWMLLLITFLNNTLES FRNPASTAFTPLILEREYYDFGLSFSQSSSRICELIGTGMGGILIAAIGLSGAILFDVAS FFLSALIICCIHSKEITEKAEVDIHKSIYLLKEGFRYVKGMPLLIVICACAMLMNMLLVP YNSFQAPYISGILHQGADLLSVSSLALSVGMGIGSFVYPYLHKHMRNRPLLLTGGVSTGF YYLALTQIAHLQGTVVIYCTMAVAAFLFGFCIAILMNIVTISFMKHVEQCYLARVSAIFN ASATIATPLTSFAMSVVCLYVSLPVIFASFALFTFVVFTGMIFLKQLKNL >gi|312955974|gb|AENW01000028.1| GENE 7 6790 - 7881 1120 363 aa, chain + ## HITS:1 COG:no KEGG:GYMC10_1402 NR:ns ## KEGG: GYMC10_1402 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 102 360 110 361 364 103 28.0 1e-20 MKILFKNHFQPMLECCELLEDCLRKERYEETLRGEHLPIEEEKRIQSHIDVLTDIRSEVD AVFLQDYKDLSLLFEDKKNGKVTPFRSFFISYLDMEETDWKLQLQRLRRVCEKDRLCLIR AYISNFDEDKDYKNVEDAVLLQDLNATSLSAEDKWELLMKAQDMTAVLDRWEELFIKLLA VLDRYQKEYAEAARQFEDMIENHEELLKELSELTGMKLDEVLFKSEELLILPAFSGFRSL SFLTQDLNEHGKATLIWGLDILSLLKYKKAGMSVDTICTSLKLLSDKSKFEILCYVSRQC AYGAQIAKELQLTTPTISYHMQALMNAGFIKFRKENNRLYYSLNREYLEEFLEMTKQKLL SNS >gi|312955974|gb|AENW01000028.1| GENE 8 8182 - 8589 537 135 aa, chain + ## HITS:1 COG:no KEGG:CD3166 NR:ns ## KEGG: CD3166 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.difficile # Pathway: not_defined # 6 119 7 120 120 62 36.0 4e-09 MKVTAYKDPLTLSVDIAQEREKALVLWEMEKRKKRLEELCKAIPSMLKKEIMEQLDELIS LGLVSRIVHVHKKPTMIEYALTNRGAMLLKCLRKMMDVGIGIMMDYHMEEILIQEGYIER VEVASESDAETLQNA >gi|312955974|gb|AENW01000028.1| GENE 9 8661 - 8951 270 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAYLSFPDFMEKKRYRFQSRLWEGDPMYRSKIWKAHRQEYARVCRFGKYANDQKLLDEEV MQYERRILEARRNSGMLTEKEFRQLQDELLMQFPLW >gi|312955974|gb|AENW01000028.1| GENE 10 9722 - 10255 582 177 aa, chain + ## HITS:1 COG:CAC0841 KEGG:ns NR:ns ## COG: CAC0841 COG1396 # Protein_GI_number: 15894128 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 177 1 179 179 189 54.0 2e-48 MDIGQKIRQLRTQNNLTLEELASRSELTKGFLSQVERNLTSPSVSTLEDILEALGTDLAS FFKDSKENKVVFKKEDYFVDEHEEYCIHWIVPNAQKNEMEPILLELSPQGSSKEFDPHDG EEFGYVLEGRITLVNGDKEYPVKKGETFYINGKYRHYLKNNGKNEARVLWITTPPLF >gi|312955974|gb|AENW01000028.1| GENE 11 10269 - 11846 2208 525 aa, chain + ## HITS:1 COG:CAC0840 KEGG:ns NR:ns ## COG: CAC0840 COG3842 # Protein_GI_number: 15894127 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Clostridium acetobutylicum # 1 311 1 311 352 400 64.0 1e-111 MEEKKLIQFQNIVKDFDGTLVLKGINLDIYENEFVTLLGPSGCGKTTLLRILGGFLNQSE GHVIFDGEDITDVPPYKRELNTVFQKYALFPHMNVYDNIAFGLKIKKMSKDVIEQKVLKM LKLIGLEGYEKKDVTLLSGGQQQRIAIARALVNEPKVLLLDEPLGALDLKLRKEMQYELK KIQQEVGITFIYVTHDQEEALTMSDKIVVMKDGEIQQVGTPTDIYNEPENRYVANFIGES NIIPGVMLDDYKVMFDDISFDCVDFGFKKNEKVDVVIRPEDLDIVKEEDGKMTGIVKSVL FKGVHYEIMVETVPGTTVSVMMNVTEEHDVSSSDAKERISANDFYVDIEDVKELNDAEII ARADAQAWSPQDDEYISINKIEYDIPEEIGTYPVTFSTSSGTSVSIKVFVVQQKYVENPK ANEAISAFNFFKTVDELKESAAIDTDLKTWANAQSWKLSDESDVEISDVDYDFDPDNITA GTYQVTFSTQGREFKVHTTDIAEEGAEVGLSFYPEDIHVMSKMGY >gi|312955974|gb|AENW01000028.1| GENE 12 11848 - 12696 924 282 aa, chain + ## HITS:1 COG:CAC0839 KEGG:ns NR:ns ## COG: CAC0839 COG1176 # Protein_GI_number: 15894126 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Clostridium acetobutylicum # 9 271 11 269 277 253 51.0 4e-67 MKTFKRLTYPYIIWITAMIVIPMLLIIVYAFTKQGNDVATLQFTLEHFKKFFTDPDFLKT LWLSLRIALMTTVLCVLIGYPVAYAISQSSKRNLLILLVTLPMWINMLVRTYAWIGILAD NGLINHILTYFGMEPAKLLYTDGAVVLGMVYNFIPFMILQIESSLAKMDRSLLDAANDLG ANRVERFRKITFPLSLPGVISGITLVFLPSVSSFVIPKLMGGGGYMMIGNVIENQFITVG EWNFGSAISMIMAVIIMISMYVTRRLDKGDDSVRAKRGGNVQ >gi|312955974|gb|AENW01000028.1| GENE 13 12693 - 14588 2228 631 aa, chain + ## HITS:1 COG:CAC0837 KEGG:ns NR:ns ## COG: CAC0837 COG0687 # Protein_GI_number: 15894124 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Clostridium acetobutylicum # 303 631 27 354 354 248 40.0 4e-65 MKNSKLSRRLILGCVMVFFYFPILYMLIFSFNGSRSLTSFDGFSLQWYHKMFNDRNMMEA IYYTLVTAVVATFVSTIVGTITAIGLSKSRRIVREVVQQINDLPIMNPEIVTAVGLMLFY VSLHMEKGFLTMLLAHIAFCTPYVILSVMPKLRGLDPNLAEAAMDLGARPTQAMWKVIVP QIMPGVVSGALIAFTMSFDDFIISYFVTGNGVKNISTLVWTMSKRINPSINSLSTLIVIM ITITLLIVNIVPLVREKAARNNKPISYKVSGIVGMCFVLVIGGLLFALKGGVGSTSTEDA IAKYGSDTLKVYNWGEYMDPDVNAAFEKQYGVKVIYDTFDSNELMYTKLQGGESYDVLVP SDYMIERLIKEEKLQPLDKGVVTNLAVLADGVKGLSYDPDNTYSAPYFWGTVGIVYNKNN VAKADLEKEGFNIFQDTKYKGRLYLYDSERDSFMMALKALGYSMNTSSEKELHAAYEWLV KAVSTMDPEIVTDEVIDAMINGNKDLALVYSGDAAFILSENEDMEYFMPKEGTNLWSDAM VIPKDAKNPKLANEYINFVLEYEQSMKNSLFVGYASSNGEVLDELSGKDGEFYGNNAYMP RVGYPKDEIFEYNEKTKKLISDYWTKVKIAK >gi|312955974|gb|AENW01000028.1| GENE 14 14952 - 16583 993 543 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 538 3 542 545 289 33.0 2e-76 MKRIPIGLKDYKKLKDENYYVVDKSLMIKEYMDRGSEVTLITRPRRFGKTINMSMLAEFF DITKDSREIFKDTAVMHTSTADEINRYPTIFLTFADAKGSKENIIYQIKSQLMTAYDTYA HVYEELRTFERVKLERISTGLMEEENVSLDKLTNAISFLMLKCHQYYGKKVMLFIDEYDT PFIEAHALGFYDELRGGLASMLHTSLKTSNDLQYAMLTGIQRVAKENIFSDLNNPLVCTV KDREYAEYFGFTKQEVKELLEAYGFVYDDAVRQMYDGYNMGGIDIYNPWSIINYVNRGEL IPYWVNTSSNKMIKSAMQDCEASFKDGYEELIRTETVNTLVNFETSFFEIRETSSLWGLF VNAGYLTVEKVVDPLLGKYILRIPNKEIVSEFSSLTAHYLHIDENSLDILLDKFLQQNWD AFLDGYQKILMKTMSYFDLINENSYQTLLLGMLIRLDNRYEIISNREQGEGRFDICLKNR NAEDPSIIIELKYTKDVSKGLQDLAHQACIQITEKQYGYPMQKVIKIGLAHCGKQARMYV QRD Prediction of potential genes in microbial genomes Time: Sat May 14 02:16:47 2011 Seq name: gi|312955972|gb|AENW01000029.1| Clostridium sp. HGF2 contig00058, whole genome shotgun sequence Length of sequence - 1846 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 153 - 1757 451 ## COG3666 Transposase and inactivated derivatives - Prom 1783 - 1842 2.9 Predicted protein(s) >gi|312955972|gb|AENW01000029.1| GENE 1 153 - 1757 451 534 aa, chain - ## HITS:1 COG:BH2841 KEGG:ns NR:ns ## COG: BH2841 COG3666 # Protein_GI_number: 15615404 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 61 523 58 535 573 181 27.0 4e-45 MTSTQINQGNYTAYQPYMLLNFDYSFQNDVLDDDLSVTILEVLGRINLNKFIDFHNLDSR SYDPVMMLTIILMAFAEDGYASLRKLEKLCRYDIRYRSITNGCVPSYKSFERFINHTLKE SIQTIAKEIYLYVQDEKALEEQILYIDGTKFEANANKMTFCWKGWSKRYLPRHWQKCMEL LKQVNRYFKKHEININYSILKYPNIEYMIKIDEALENWLKEKEYIRKGRGKHEIAKLCDE LKKSAVKMWEYAIQEDILEDRNSFSKTDPDATFMHMKYDYYNHTNVFKPGYNVQIGVNNG YIAYQYLSSDPNDIKTLQPFTEGYKELYGKYPDIEVTDAGYGSYDNYCYCKSKGIKGLLK YSGYEKKKEKVNDKNRYQLRHMERQEDGTPVCPAGHVFEIERIGLNIKGQYPKTTMYYRN KNCGECPHRSKCTTSKNGRSARIVPALEKMHKEIDECLKSEEGKRLMRNRSAQAEGAFAD IKQDFEYVRLHRRGESGVKVELSLVCIGYNIRKYHNYKIRDKKREKQRNVSKLN Prediction of potential genes in microbial genomes Time: Sat May 14 02:17:03 2011 Seq name: gi|312955911|gb|AENW01000030.1| Clostridium sp. HGF2 contig00049, whole genome shotgun sequence Length of sequence - 64453 bp Number of predicted genes - 60, with homology - 53 Number of transcription units - 35, operones - 14 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 9 - 1472 915 ## Elen_3094 regulatory protein GntR HTH - Prom 1528 - 1587 4.8 + Prom 1448 - 1507 6.0 2 2 Tu 1 . + CDS 1600 - 3003 1071 ## COG2200 FOG: EAL domain 3 3 Op 1 . - CDS 3400 - 5622 2070 ## COG2200 FOG: EAL domain 4 3 Op 2 . - CDS 5606 - 6901 1246 ## Cbei_0732 extracellular solute-binding protein - Prom 6961 - 7020 5.4 - Term 7363 - 7411 0.7 5 4 Op 1 36/0.000 - CDS 7595 - 9844 1798 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 6 4 Op 2 2/0.000 - CDS 9854 - 10552 340 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 10577 - 10636 4.2 - Term 10607 - 10633 -1.0 7 4 Op 3 . - CDS 10638 - 11255 508 ## COG1309 Transcriptional regulator - Prom 11277 - 11336 5.3 + Prom 11356 - 11415 4.7 8 5 Op 1 . + CDS 11435 - 12274 497 ## gi|237735205|ref|ZP_04565686.1| predicted protein 9 5 Op 2 . + CDS 12268 - 12648 499 ## gi|167757660|ref|ZP_02429787.1| hypothetical protein CLORAM_03210 + Term 12733 - 12793 5.4 - Term 12720 - 12781 3.1 10 6 Tu 1 . - CDS 12921 - 13517 505 ## PROTEIN SUPPORTED gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase - Prom 13683 - 13742 8.1 - Term 13773 - 13811 6.1 11 7 Tu 1 . - CDS 13824 - 14054 167 ## - Prom 14085 - 14144 4.0 + Prom 14229 - 14288 6.9 12 8 Op 1 . + CDS 14310 - 14837 466 ## GSU1233 phosphoesterase, putative 13 8 Op 2 . + CDS 14912 - 16222 1578 ## COG2270 Permeases of the major facilitator superfamily + Term 16435 - 16467 -0.9 + Prom 16474 - 16533 4.9 14 9 Tu 1 . + CDS 16673 - 17599 776 ## gi|160914625|ref|ZP_02076839.1| hypothetical protein EUBDOL_00632 + Term 17606 - 17659 12.4 15 10 Tu 1 . - CDS 17909 - 19228 1116 ## COG4826 Serine protease inhibitor - Prom 19302 - 19361 6.1 - Term 19350 - 19393 9.0 16 11 Tu 1 . - CDS 19443 - 21365 1859 ## COG1048 Aconitase A - Prom 21436 - 21495 6.5 + Prom 21400 - 21459 6.6 17 12 Op 1 . + CDS 21486 - 22820 1585 ## COG0372 Citrate synthase 18 12 Op 2 . + CDS 22822 - 23820 1235 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 23834 - 23883 6.4 + Prom 23977 - 24036 5.4 19 13 Tu 1 . + CDS 24058 - 24249 237 ## gi|218282370|ref|ZP_03488652.1| hypothetical protein EUBIFOR_01234 + Term 24274 - 24317 3.0 + Prom 24276 - 24335 1.8 20 14 Op 1 . + CDS 24359 - 24667 277 ## gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 21 14 Op 2 . + CDS 24754 - 24978 235 ## Lebu_0945 protein of unknown function DUF1703 + Prom 24996 - 25055 2.2 22 15 Op 1 . + CDS 25107 - 25262 93 ## 23 15 Op 2 . + CDS 25241 - 25861 285 ## Lebu_0003 protein of unknown function DUF1703 24 16 Op 1 22/0.000 - CDS 26162 - 27409 1382 ## COG0014 Gamma-glutamyl phosphate reductase 25 16 Op 2 . - CDS 27410 - 28204 859 ## COG0263 Glutamate 5-kinase + Prom 28414 - 28473 6.6 26 17 Tu 1 . + CDS 28700 - 30643 2849 ## COG0326 Molecular chaperone, HSP90 family + Term 30677 - 30720 7.2 - Term 30636 - 30674 -0.4 27 18 Tu 1 . - CDS 30683 - 31144 114 ## - Prom 31317 - 31376 3.8 + Prom 31040 - 31099 4.0 28 19 Op 1 . + CDS 31244 - 31570 364 ## Cthe_0307 hypothetical protein 29 19 Op 2 . + CDS 31572 - 31976 122 ## gi|160915758|ref|ZP_02077966.1| hypothetical protein EUBDOL_01773 + Term 32101 - 32137 2.8 + Prom 32294 - 32353 6.9 30 20 Op 1 . + CDS 32373 - 32948 789 ## COG1396 Predicted transcriptional regulators 31 20 Op 2 11/0.000 + CDS 32945 - 33859 957 ## COG1180 Pyruvate-formate lyase-activating enzyme 32 20 Op 3 . + CDS 33863 - 36244 2888 ## COG1882 Pyruvate-formate lyase 33 20 Op 4 . + CDS 36273 - 37079 1226 ## COG0345 Pyrroline-5-carboxylate reductase 34 21 Tu 1 . + CDS 37279 - 38214 1009 ## CLI_3319 hypothetical protein + Term 38223 - 38259 -1.0 + Prom 38377 - 38436 5.9 35 22 Op 1 . + CDS 38524 - 39141 731 ## COG1011 Predicted hydrolase (HAD superfamily) 36 22 Op 2 . + CDS 39128 - 40489 827 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 37 22 Op 3 . + CDS 40521 - 40901 121 ## Arch_1303 hypothetical protein + Prom 40985 - 41044 3.7 38 23 Op 1 . + CDS 41187 - 41432 64 ## gi|225570299|ref|ZP_03779324.1| hypothetical protein CLOHYLEM_06395 39 23 Op 2 . + CDS 41506 - 41811 58 ## + Term 41903 - 41942 2.0 + Prom 41839 - 41898 6.5 40 24 Tu 1 . + CDS 41965 - 42168 118 ## + Term 42170 - 42218 1.1 41 25 Tu 1 . + CDS 43186 - 43326 57 ## + Prom 43732 - 43791 6.8 42 26 Tu 1 . + CDS 43824 - 44468 888 ## COG0546 Predicted phosphatases + Term 44476 - 44512 4.2 43 27 Tu 1 . - CDS 44469 - 45170 713 ## Apar_0137 transcriptional regulator, Crp/Fnr family - Prom 45234 - 45293 6.2 + Prom 45167 - 45226 9.3 44 28 Op 1 9/0.000 + CDS 45312 - 46028 831 ## COG0813 Purine-nucleoside phosphorylase 45 28 Op 2 . + CDS 46077 - 47267 1423 ## COG1015 Phosphopentomutase + Term 47461 - 47496 -0.3 + Prom 47433 - 47492 4.5 46 29 Tu 1 . + CDS 47512 - 47766 269 ## gi|225388429|ref|ZP_03758153.1| hypothetical protein CLOSTASPAR_02165 47 30 Tu 1 . - CDS 48075 - 50414 2508 ## COG1199 Rad3-related DNA helicases - Prom 50485 - 50544 5.0 + Prom 50443 - 50502 7.7 48 31 Tu 1 . + CDS 50629 - 51582 187 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Prom 51913 - 51972 8.6 49 32 Tu 1 . + CDS 51997 - 53253 277 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 53365 - 53406 4.1 + Prom 53933 - 53992 8.0 50 33 Op 1 . + CDS 54051 - 54362 431 ## gi|293401023|ref|ZP_06645168.1| stress response protein NST1 51 33 Op 2 . + CDS 54402 - 55448 1377 ## ACL_1174 V-type H+-transporting ATPase, subunit C (EC:3.6.3.14) 52 33 Op 3 . + CDS 55463 - 57385 2052 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 53 33 Op 4 . + CDS 57400 - 57843 597 ## ACL_1172 integral membrane protein 54 33 Op 5 . + CDS 57862 - 58170 438 ## ACL_1171 V-type H+-transporting ATPase, subunit F (EC:3.6.3.15) 55 33 Op 6 . + CDS 58181 - 58777 814 ## gi|293401018|ref|ZP_06645163.1| hypothetical protein HMPREF0863_01303 56 33 Op 7 16/0.000 + CDS 58812 - 60563 2079 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 57 33 Op 8 16/0.000 + CDS 60576 - 62018 1746 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 58 33 Op 9 . + CDS 62021 - 62683 809 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D + Term 62864 - 62921 3.0 - Term 62741 - 62781 -0.9 59 34 Tu 1 . - CDS 62804 - 64030 299 ## LBJ_0077 transposase ISLbp1 - Prom 64087 - 64146 2.9 60 35 Tu 1 . - CDS 64153 - 64344 140 ## - Prom 64377 - 64436 7.3 Predicted protein(s) >gi|312955911|gb|AENW01000030.1| GENE 1 9 - 1472 915 487 aa, chain - ## HITS:1 COG:no KEGG:Elen_3094 NR:ns ## KEGG: Elen_3094 # Name: not_defined # Def: regulatory protein GntR HTH # Organism: E.lenta # Pathway: not_defined # 1 471 1 480 486 183 28.0 2e-44 MQRKETLFEYLYHSLREEIISGRIPFGSTLPSIMRLSELYHVGVRTVRDVMVRLKQEGYI KTEERKPMIVIYRQDQRKQKSAAIRYIVENQHSLRDVYATMTLIMPRILSFSVQVCSDYA LHRLEEKVKEASAKNAAFRWKTNLKFFYALLDQTHNMFFRDLFSSLELYARPTFFFQEKQ FSNLQNSFQFQNILWVQEAMYSRQLTESMNRLTRMYAAVQKTVELQIQELCRQSPHIKQT EKPFLWHSDRGRDHLHVQITRDLIDKIGTGKLAVGTRLPSEAELASQYRVSVATIRKALA SLNELGYAKTQNVKGTTVCMQDGDIAAKCMQIKVYREDTLRYLSGLQLMILLMKPAASSA FPFISAKALLQLQCDLQDKNRIPLDCLTALVRRYVPSKTLQTLMTELGKILCWGYYYSFY PQKQHGSTVLNRKSMEAVKYLLEGNQEAFSRQLCICYAHILDVVRSNMIDLKLFEASYMI TPKEPFL >gi|312955911|gb|AENW01000030.1| GENE 2 1600 - 3003 1071 467 aa, chain + ## HITS:1 COG:PA4601_3 KEGG:ns NR:ns ## COG: PA4601_3 COG2200 # Protein_GI_number: 15599797 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 224 456 1 232 247 181 40.0 2e-45 MRHMELIPDDLQCASVLLFMLLLLILAFLAGAYLANRGAWTGIFLHDPLTKGMKPIQFQN RVKRLLDKKPAIAATLVLLNIEHFQRINHRYGMQLGDEVLCQVYKVLCQHLDANEFMARE EGDSFFLFLLTQDTSLLQNRIDEIQKDIHKQTENLQSIIRLRQGACLVDGTQKDVDLLIN RAKLALRQYVSGKGCVFYDAALMEAVRREELLNSLFASSLRQHEFQLYLQPKVTLKTNQC THAEALVRWHHPRFGNICPSAFIPVFEKNGYIMELDRYMFEEVCRYLQTRNAAKKEKLMI SINISRRHFQNPAFLEEYAEIKERYGIADGQIELELTESVFFNEEQIALVKQAVFRMHQL GFRCSLDDFGSGFSSLGLLKSFDVDAIKLDRIFFEDIAQKKAQDILCCLIELAHRLHIQV VAEGIETEEQLDFLRTTTCDMVQGYYYARPLPAAEYTAWLEQFHSVE >gi|312955911|gb|AENW01000030.1| GENE 3 3400 - 5622 2070 740 aa, chain - ## HITS:1 COG:PA4601_3 KEGG:ns NR:ns ## COG: PA4601_3 COG2200 # Protein_GI_number: 15599797 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 502 733 1 232 247 187 39.0 6e-47 MKTITKRSFFILFSIVSATGIILAAIAFVTNVKSLLWEKSVTDIIEVTQQGSHALDTYIE KDYDTLHLFVRELQKTSAADKNSIQEIVSVFNEDGTSFYCSDLSSGITYSNLPEKIPRMT KEQRKMYAKMSGSSIRDPFLDGYTGVKTIGVFERFTFRDGTQGIAQKTRPLTSMTERFSL SFFNQTGFSYVVNQNGDVLIRSLHKDSNRTFQNLFDIIDLQGNDEEQLNFFKQRLKESKT GAAQFRYQGEEYIFCYVPLYNGDNWNIVSIIPNRIIMQQANSIIKQTIALCLFIMLVLAA FGYLYHRNRKKHQKEIEKLAFYDNLTGLYRYEKFLLDGQLILEKKEQPVAVLYLDIMGFK LLNDMEGYGYGDRVLLFVADILRSVAKQQDICCRISGDDFILLTPYAKKEEITETCRQIL TLSATGVDNRHDIPIRIGICLQEDADIDSTISTLVDRARMAQTGIHDDSTAAWQFYNEEM REILLRDAEMEQHMEQALRDGEFLHVIQPKYALDGSQILGGEALLRWQRKGHGFTSPGEF IPLFERNGFIRKLDTYVFISVCQTIQKRLAQGKAVVPISVNVSRIHLYQEDFADSYIAIK NQYHIPDGIIELELTENILLKNTREIFTILEKLRSHGFCCSIDDFGSGYSSLNALKDLPV DVVKLDRVFFDQSSHVERNKTILKSMISMAKELDMKVVAEGIECTQQLDMLQDTGCDMVQ GFIYAKPCSEEDFYHRVETE >gi|312955911|gb|AENW01000030.1| GENE 4 5606 - 6901 1246 431 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0732 NR:ns ## KEGG: Cbei_0732 # Name: not_defined # Def: extracellular solute-binding protein # Organism: C.beijerinckii # Pathway: not_defined # 1 414 1 405 416 96 24.0 2e-18 MNSKHLGMGILIAALFLTGCGRQKITSYEPDTTHASLPETKLTFFGYKYEAINVTAIEDS LRDFMQENEHISITYEGIKGVDYYEVLDKRISTKNGDDIFMVDQASMLDLQKKGVLADLS DLSTIYDFSDLVRNQMNANDTLQYVPTSISAFGLYCNEDLLKKHKQKIPKNLQEFMDVCA YFKNKGITPIVANNDISLKTIILAKGLYPVYQQQDKDAAMEQFNTGERDLAKTLEPGFAL VEEMIQRGYVDADEALKTEKTKDDLILFAKGEQPFMLTGAWAAPRLRDLQPKFTFSIHPY PILEDGCAMVINIDTRISVNANSPHVKEAKQFVEYLTQKDVLWKFVNSQSSFSPLKDEQM AQDIAIQPMEPYLTNGRSVIGADDNLIYPIWNLTRESTQKLLKKEERASVLADLRKQLAQ IRKENSHEDNN >gi|312955911|gb|AENW01000030.1| GENE 5 7595 - 9844 1798 749 aa, chain - ## HITS:1 COG:CAC1534 KEGG:ns NR:ns ## COG: CAC1534 COG0577 # Protein_GI_number: 15894812 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 5 745 3 741 746 196 23.0 2e-49 MRNPLHKSLKKEFLRNRSRYISLSLVLILMIGVVTGFLSVAYSAKELLIKDQISSKVEDG QLALRDRMDVKTKTKLEALGLKVYEQFYTEQSVSRDTMVRVYRKRFDINRATLHEGRMPN KQTEIALDRLFALKNGYSIRDTIRMSGKSMTITGLISVPDYTSLIQKNSDMMMDPIHFGI AIVTDTGFQTLSTDRMVYSYSYYLDDRELNDFQKQKRADDIQEICIREGAVLENLLTAQM NQAISFLPNDMGSDIPMVQTLLYIILMILAFIFVVISQTMIEEQASVIGTLLASGYTRRE LLQHYMMLPTILIIVCAGIGNLIGYTLFPNLFTDMYYSNYCLPPLSIQPVWEALLSTTVM PFIFMMLILYMLLKRRLRLSPLRFLRKDLRRHRQRRYIPLHGSSFFQRFRIRIILQNKGS YLVLFLGIIFASFLLMFALILTPSMEQYIRNLEADSRCDYQYLLKAPVQADGEKVTLTSL KAYYVGGDLDLDVTLYGLGPNSGYYTDMTLSSDPKSIVISSDFASKMSLQVGDAITLRNP YRDKAYSFTIQDIYPYNTGFSAFMPRNQLNQLLHEDHTYFNGYLSNQPLDIEEAYVQSVV TRSDLVKINEQMTQAFSQLLPVLTSVSIAIYLVVLYILTRLVIDRNAISMSFLKVMGYTA KEIRSLYLHATTLVVLASLTAALPLCNIALRYLMKFAFMKFTGNLSVYIPGYVYFLVFVT GGVAYLFIKALLTRRIEQMELGYALKEDA >gi|312955911|gb|AENW01000030.1| GENE 6 9854 - 10552 340 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 215 2 217 245 135 38 6e-31 MYLQANNVEKFYGNKEARVQVLKGISCGIEQGEICVLLGPSGSGKSTFLNLIGGIERIDK GELLIGGKDLAGMPDKELALYRRHTLGFVFQSYHLVSNLTVKENMESGAYLGRHAKSIED LLERLGLTQHRNKYPNQLSGGQQQRCAIGRALAKNPELLLCDEPTGALDYHTSRDILRLL EEINRDFQTTVILVTHNAAFAAMAHRVLWLKDGRITRVHCNAQRVTADALEW >gi|312955911|gb|AENW01000030.1| GENE 7 10638 - 11255 508 205 aa, chain - ## HITS:1 COG:DR2148 KEGG:ns NR:ns ## COG: DR2148 COG1309 # Protein_GI_number: 15807142 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Deinococcus radiodurans # 3 86 19 101 204 63 39.0 2e-10 MQQETTRERLLESASREFLSNGYQKASLRTICRNAGVTTGALYFFFKDKSALFHALVKDA AEAVMQMLYQHTSFEEEVYSNTDQLMDMEHDIRFAQELISFYYAHETALELLFNCSWGSA YQDFTEQIIAYLVKRNTKIISAMVKDDDTVFNACTLHWLSQIQVEAFLHILSHHYSQEQA LHQIRIVVTFLRGGFEGLYQQAVKN >gi|312955911|gb|AENW01000030.1| GENE 8 11435 - 12274 497 279 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237735205|ref|ZP_04565686.1| ## NR: gi|237735205|ref|ZP_04565686.1| predicted protein [Mollicutes bacterium D7] # 168 279 23 134 134 88 37.0 4e-16 MERYQIQSKDCLLQVYACGRFDRGTAIIFLHGGPGSGAQAIMELPAFRALEEDALCIHFD QRGSGASSYDLKKGLCIDTLTNDVLRVIQDTRSRWSVKRLYVWGGSFGGCLAALCLERFA QELTGCILSSPAISFSRSQLLEQFERMSAAFRVRMKELPQKAEDPPTPEALFAMEDFRAF IYSADNPSKSLRHICAMSSWFFQHSFHGLFDACEVPLLILQGKDDPVCSWRTLYDELAAC ERKTIIKRFYEHCGHEVFTDQRDAFLKEIRAFLKEEPVC >gi|312955911|gb|AENW01000030.1| GENE 9 12268 - 12648 499 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|167757660|ref|ZP_02429787.1| ## NR: gi|167757660|ref|ZP_02429787.1| hypothetical protein CLORAM_03210 [Clostridium ramosum DSM 1402] # 1 122 1 121 123 105 40.0 1e-21 MLVYVCCATGNTSGMFCKQIQKASCREQIYVEEIHELGNHLEDALRENDLVLAYGSAEII DEKFIRRYHFEYHMQAIWLAPQMRYLKDSMKKKLNCFDIPIHIIDMKTFGKMDGKQALQD ILNAMI >gi|312955911|gb|AENW01000030.1| GENE 10 12921 - 13517 505 198 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229859876|ref|ZP_04479533.1| acetyltransferase, ribosomal protein N-acetylase [Streptobacillus moniliformis DSM 12112] # 1 183 1 182 187 199 50 4e-50 MEHKGTTVITSKRLLLRRFAIEDAEAMFHNWASDPDVCRFLTWPPHPDVNVTRRILQNWI TSYAQPNFYQWAIALQEHPHNVIGSISVVAQNEELDLVHIGYCLGKEWWHQHITSEAFTA IIPFLFEEVKANRIETRHDPDNPNSGRVMRSCGLTYEGTAREADRSNRGIVDACNYSLLK KEYPQWLHERGITSTAFR >gi|312955911|gb|AENW01000030.1| GENE 11 13824 - 14054 167 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYNNCGCNREFGFNDGCGYNRSEWNSGCGCNNDYYNDNAALYEAECVARAALRRRNRENR CAREFVRCMKNARCGY >gi|312955911|gb|AENW01000030.1| GENE 12 14310 - 14837 466 175 aa, chain + ## HITS:1 COG:no KEGG:GSU1233 NR:ns ## KEGG: GSU1233 # Name: not_defined # Def: phosphoesterase, putative # Organism: G.sulfurreducens # Pathway: not_defined # 1 170 4 156 161 71 32.0 1e-11 MKILLMSDTHGELKTARSILQEHAAADLKIHLGDVGFPLREIDECTIVKGNHDRTQRLPK KVKLTLEGRKAICLHGDIFDDETVQEVLAMHHVPNDEIMGLCMRTLYGKLAAYAKRKGCD TLFFGHTHHQCFTEVDGVVLINPGSVCYGTPHSGYAVVEIHGCCIRAQLLAVENC >gi|312955911|gb|AENW01000030.1| GENE 13 14912 - 16222 1578 436 aa, chain + ## HITS:1 COG:CAC1585 KEGG:ns NR:ns ## COG: CAC1585 COG2270 # Protein_GI_number: 15894863 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 11 431 4 418 425 294 39.0 3e-79 MFTKILTKLGFTKEETSWILYDVGNSAQVLTTCTVIFPLLIAKITPGDSSVYVGWANAIY AIILAVISPVLGTMADYKDKKMKMFKFFLFMGIFGGFGLALPFIDYRAAIVIFIIAMLGY NGSIIFYDAFIVDVCDDERVDKVSAAGYAWGYIGSVLPFLIFVIPFALVTLLGDPKTGDL VLGSFTLSYRMACGLTMGMAVLWWLVYSRPMLKHVKQKNFHEPVPHVVRESFSHLYHTFR DIKKNKNIFLFCISYFFYIDCVNTVIKMAVSLATEMGISDVMSLVVVIVINIVACPFSIL FGKLVEHVGSKKMIYAGIIGYVGVVLAGSLIKTYPSFIWVVALLVGMFQGGIQSVSRSYF AKLIPDKADSNEFFGFFSVFSKFSAILGPMAVSTIIMITGETQYGILGLIPMMLLGMLFL AFVKDPESEQKFHKKK >gi|312955911|gb|AENW01000030.1| GENE 14 16673 - 17599 776 308 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914625|ref|ZP_02076839.1| ## NR: gi|160914625|ref|ZP_02076839.1| hypothetical protein EUBDOL_00632 [Eubacterium dolichum DSM 3991] # 11 304 11 329 329 171 33.0 7e-41 MRKVSEKEYPVPFHNDVFFKYMLIGEDAGSELLRRRIIEEIYGLKVQTTKVLNPELLPEV FFGKRAVLDVVLEDEAGHFYDLEMQVSGYTQEEQLRFQQYGYRLVGRQLKQCNDYIKLKP FYQIIFMNSMPKAGGRMIRHYKVKDEDNQEEPNGTLNRAIVFLLMIKQRIREVGGIKNLT EFETFCYVLAYNPDDAILNMKRRMVDVAVEKYNEMKEDNQLFSWAESAEFAERAVQANLR EQTAEAKKSGMEEGKRTSLKLLLLHKYGVDDAWVDTLTTQQVEDALISILECSTYDALKA QLTDRKAE >gi|312955911|gb|AENW01000030.1| GENE 15 17909 - 19228 1116 439 aa, chain - ## HITS:1 COG:all0778 KEGG:ns NR:ns ## COG: all0778 COG4826 # Protein_GI_number: 17228273 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Serine protease inhibitor # Organism: Nostoc sp. PCC 7120 # 69 437 3 373 374 133 25.0 9e-31 MKKTVRILCVLLLLTGCSSLQKTAPSKTEKPQEQANPKIAAPADIHYPKSPSIEDHDAQI AIIDDNPVDGTLLNGYADFSQESFSAILKTASDNVSYSPLSLYYPLMMTLQASEGQTAEQ LQTLLHVDGRDSAKNMGNLYRRLYIDNESGQLKIANSLWIQNSYPVNKDFIETANKQFYA AAYDVDFSQAKTADLMAAWIREHTNGNLSPSIRTNESMRMAILNAVYYKARFDTEFDKKD TKKDIFYAQDGKVDTDFMHKEMGSHFFIDNKDYAATSLTLSNSSSLTLVLPKEDKDIRRM MEQKGFLQELLKDDTEGADFGIVKLSLPKFKVHSKLQLADTLKAMGVTSLFDTAAELNGI TNEKPFFVSDIQQETCIALNEEGIEASAYTMIGATGAANMEHPKVLDLNLNRPFLYVIST RMDGVELPLFIGVCSNPAS >gi|312955911|gb|AENW01000030.1| GENE 16 19443 - 21365 1859 640 aa, chain - ## HITS:1 COG:CAC0971 KEGG:ns NR:ns ## COG: CAC0971 COG1048 # Protein_GI_number: 15894258 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Clostridium acetobutylicum # 3 638 4 640 642 781 61.0 0 MPTITEKIIQKHLVEGVMERGKTIAIRIDQTLTQDATGTMAYLQLEAMGVDQVKTDLSIS YVDHNTLQSGFENADDHKYLQTVAMKHGVRFSRPGNGICHQVHLERFAKPQATLLGSDSH TPTAGGMGALAIGAGGLDVACAMAGMPFHLNMPNIINVRLHGSLTKGVSSKDIILKVLQI LSVKGGVGNVIEYSGDGVRSLSIPQRATITNMGAELGATTSIFPSDEVTREFLKKQHRED AYEELKADEDAVYDTVIDIDLNTLEPMIAMPHSPDNVLPISEVLGLKVDQVAIGSCTNSS YMDMMSVAGILKNKTVDPNVSLVISPGSRQVLHMISQNGGLSDMISAGARILESTCGPCI GMGQSPITNALSLRTFNRNFYGRSGTLSAKVCLVSPETAAASALYGYIVDPRTVEYELPQ EPEVFTIDDSMIIVPDAETAAETEVVRGPNIKPLPINTPLEDRIDKKVMIKVGDNITTDH IAPAGAKVLPYRSNIEKISEFIFMNVKASFHDDCLEHGGGFIIAGANYGQGSSREHAALA PMYLGIKAVIAKSFARIHRANLINFGIIPFTFSNEEDYDTIDELDELTITNLKSLAEHTP VEVMNITKNKSFQVFHSLTQRDIETILAGGTLNLIRRNQS >gi|312955911|gb|AENW01000030.1| GENE 17 21486 - 22820 1585 444 aa, chain + ## HITS:1 COG:L67186 KEGG:ns NR:ns ## COG: L67186 COG0372 # Protein_GI_number: 15672652 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Lactococcus lactis # 10 444 8 441 441 375 43.0 1e-104 MNEHLNSFYQKAREHNDIANDLFRKYDIKKGLRNEDGTGVRVGLTKIADVVGYKYVEEVK TDDIGKLYYRGIELRDIIHGRNYETICGYEEACFLLLFGYLPKKEELQEFCGYLRAHYEL PDDFLESKFLHMPGKNLMNRLQQAVLALYDYDDAPDNISVENTLEQGLNILAKLPSIICY AYQSKMHRYNKESLVIHPAQEQLSIAENILYMLRKDHAFSDLEAKLLDMMLIVHADHGGG NNSTFTNVVISSTGTDFYSSMVGAIGSMKGPRHGGANLKVSGMMKAVIEEIGYCENDIEI KALIYRILHKQFYDYSGLVYGMGHAIYTLSDPRSEVLQEYIEKLAEKKGKVREYEFYQRF EQCAKEVILDVKGVHISSNVDFYSGFVYGMMGIPEDLFTPLFVMARTIGWLAHNIENKEY DGRIMRPATKYVGSVKKYVKMEDR >gi|312955911|gb|AENW01000030.1| GENE 18 22822 - 23820 1235 332 aa, chain + ## HITS:1 COG:XF2596 KEGG:ns NR:ns ## COG: XF2596 COG0473 # Protein_GI_number: 15839185 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Xylella fastidiosa 9a5c # 2 331 3 335 335 344 51.0 1e-94 MRTITVFKGDGIGPEIVDAVLQILMAAKAPLAYECFEVGEAEYERNGKLIPDAAFASFEK NRILLKAPITTPIGKGFRSLNVTLRNKYDLYANIRPAKSNTAVKTPFDHVDIVTFRENTE DLYVGVEEQIDADTVHATKIITRKASTRIIRDAFAYARANGRKKVTCVHKANILKMSDGM FLSIFQEIAKDYPDIEADDKIVDNVCMQLVMRPETFDVMVMPNLYGDIVSDLTSGLIGGL GLLPSSNIGTDYAMFEAVHGSAPDIAGKHIANPTALLWSACMMLEHLQEGECAANIRKAV DAVLMEQKYLTPDLHGSSTTEEYRDAVIAKLS >gi|312955911|gb|AENW01000030.1| GENE 19 24058 - 24249 237 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|218282370|ref|ZP_03488652.1| ## NR: gi|218282370|ref|ZP_03488652.1| hypothetical protein EUBIFOR_01234 [Eubacterium biforme DSM 3989] # 3 52 2 51 547 68 60.0 1e-10 MRKAIPIGVNSYQKLREEDYYTVDKSRMIAEFLERKATVTLITRPRHFHRNIADTFGIRQ EAR >gi|312955911|gb|AENW01000030.1| GENE 20 24359 - 24667 277 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224543614|ref|ZP_03684153.1| ## NR: gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 [Catenibacterium mitsuokai DSM 15897] # 1 102 77 179 543 94 46.0 2e-18 MQTEYSTVMNTYPTIFLSFADAKGDKNNIVMQMKLQLLKEYKKNKQVLENIDIFEKPAYD VILRGMSDIQNGSLKDVVNAISFLMTKCHQYYGKRVMLFIDE >gi|312955911|gb|AENW01000030.1| GENE 21 24754 - 24978 235 74 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0945 NR:ns ## KEGG: Lebu_0945 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 4 70 204 270 552 67 52.0 1e-10 MLHTSLKTSDDLQYAMLTGIQRVVKENVFSDLNNLLVCTVKDKEYAEYFGFKKAEVEQIL HAYDYEYNTEIQNM >gi|312955911|gb|AENW01000030.1| GENE 22 25107 - 25262 93 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKQAMQDCDSSFKEGYEELIRTGTVNTLVNFEASFYELKETNSLWGLFAP >gi|312955911|gb|AENW01000030.1| GENE 23 25241 - 25861 285 206 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 12 196 361 542 545 87 31.0 3e-16 MGLVCALGGQCLNAGYLTIKEITDALEGKFVLKIPNNEIKREFQSLTAYYFHLDESSVAY LLDNFQNKNWDAFISGYRNILKTAVSYLTNWPPEDDLINENSYQTLLLGLFMQLDNKYEI ISNRERGSGRLDILLKSKLIDRASFLIELKYTKDANVNLKELAQKGFQQILDKEYAMDME NVMKIGMAHCGKQVEIYVGKDAESIG >gi|312955911|gb|AENW01000030.1| GENE 24 26162 - 27409 1382 415 aa, chain - ## HITS:1 COG:CAC3254 KEGG:ns NR:ns ## COG: CAC3254 COG0014 # Protein_GI_number: 15896499 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Clostridium acetobutylicum # 12 414 15 417 418 416 52.0 1e-116 MKTLEQLGNACKQASRQIMNADRNQKDALLRAIAKQLEQDMPAILKANALDVENGKANGM NAGLLDRMLLNEARMQQIIEGVYQVCALPDPIGEITDMHTTENGLQIGTMRVALGVVGMI YEARPNVTVDAAVLSLKAGNAVMLRGSKDILQSNLVIVSSMRRAAAACGFCADIITLLED TSRETATAFMKLNAYLDVLIPRGGAGLIANTVKNATVPVLETGTGNCHVYVDKDADTAKV IPIIINAKTQRTSVCNACESVLIHKDISDSFTQELLASLKQHHVKIHADSHICALDTNCI PATEEDYASEYLNLEISIKTVSTLEEAITHINTYSTHHSEAIISENYTSVKRFLKEVDSA CVYANASTRFSDGFEFGLGAEIGISTQKLHARGPMGLQALTTKKYIILGEGQIRP >gi|312955911|gb|AENW01000030.1| GENE 25 27410 - 28204 859 264 aa, chain - ## HITS:1 COG:lin1228 KEGG:ns NR:ns ## COG: lin1228 COG0263 # Protein_GI_number: 16800297 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Listeria innocua # 2 263 3 268 276 260 51.0 2e-69 MKDMKEIKRMVVKVGSSTLTHSGGGLNFQRIDALAMVLSDIKNSGLDIVLVSSGAVAAGV AKMQMRKRPELMREKQAAASVGQCELMFIYDKFFSQYGQSIAQLLITKTVTKNEMLRENA VNTLETLLEYGVIPIVNENDSVAVDEIAYGDNDTLSAVTAYLTNADLLVLLSDIDGLYED DPVKNKNAKLIPVVNSIDESIFNMAKGAGSSRGTGGMVTKISAAQFANEHGIPMIIANGK KPSILYDILRDEYRGTLFDTKEEV >gi|312955911|gb|AENW01000030.1| GENE 26 28700 - 30643 2849 647 aa, chain + ## HITS:1 COG:BS_htpG KEGG:ns NR:ns ## COG: BS_htpG COG0326 # Protein_GI_number: 16081033 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Bacillus subtilis # 4 643 3 626 626 657 56.0 0 MARKKQFKAESKRLLDLMINSIYTHKEIFLRELISNASDAIDKLYYQALSDNLSDVDTSG FKIYLEADKENRTLTIRDNGLGMNKDELEDNLGTIAKSGSLAFKQEMEDAEKKDDVDIIG QFGVGFYSAFMVASRVEVTTKKYGEETAYLWSSNAVDGYSIDECEKDEHGTEIVLYLKDN TEDENYDDYLQQYEIERLIKKYSDYIRYPIEMWVETSKRVDDAESENEDADKPAEPKYET VKELKTLNSMIPLWKRSKSEITKEEYDEFYKSKFNDYTEPQKVIHTSVEGAVSFTTLMFI PGKAPFNYYSQDYKKGLQLYSRGVFIMDNAEELIPEHFRFVKGLVDSQDLSLNISREMLQ HDRQLKVIANRIEKKIKSELLLMLRNDREEYEKFWKNFGLQIKFGVYNDFGANKETLQDL LMFYSSKEQKLVTLDEYINRMEEGQEHIYFMSGDKVELIDNLPQVKKVKEKGYEILYLTD NVDEFALQALMNYKEKTFKNISQGDLDLDSEEEKKELEKKAEENKDLLSGIKEVLGDKVK DVKISSRLVDDPVCLSSEEGMSFEMEKVLSAMPEGNPYGMKASRILEINPNHEIFNALQK VYEQDKDAVKDYADLLYDQALLIEGFPIENPTEFSKKICDFMVKASK >gi|312955911|gb|AENW01000030.1| GENE 27 30683 - 31144 114 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQVFLYGCRHLCSIYTKHEAIPLLFSSKAPQHMKKQVFDFTLCFRHATYSAAFLPKQLE AVFHVFIVLRNRFASLSPGTAAYFPLAMDDYLFLPIMLQKDDLFLRILLIYRCRYPRVMD SKSHYCFISAFHHFVLHLKSLGNKKTCLSVKLH >gi|312955911|gb|AENW01000030.1| GENE 28 31244 - 31570 364 108 aa, chain + ## HITS:1 COG:no KEGG:Cthe_0307 NR:ns ## KEGG: Cthe_0307 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 4 103 13 119 125 65 37.0 4e-10 MRRRSIFGIIVLSIITCGIYYLIAWVQVFSDINYGARENDTAITDLLLSFVTCGIWGIFC FWKYSKKLYMIGAEDNSLINVLLAVFGLPIISLCIMQSSINDLIDRTY >gi|312955911|gb|AENW01000030.1| GENE 29 31572 - 31976 122 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915758|ref|ZP_02077966.1| ## NR: gi|160915758|ref|ZP_02077966.1| hypothetical protein EUBDOL_01773 [Eubacterium dolichum DSM 3991] # 22 133 21 132 132 115 50.0 1e-24 MSRDGKNALGIGVILFLVLFVFGSFCPMERIFGIPCPGCNMFSAIYWLWKGNLSAAWYFH PAVFLLLPYAAVCAVLFVRNREDILKRRAFRVMSVLLLWIMLAVYLWRMLYVFPHAPMQV NEHAPFISLLQLFF >gi|312955911|gb|AENW01000030.1| GENE 30 32373 - 32948 789 191 aa, chain + ## HITS:1 COG:PA4499 KEGG:ns NR:ns ## COG: PA4499 COG1396 # Protein_GI_number: 15599695 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 5 186 6 183 187 81 30.0 8e-16 MNKNIGELIKQRRTENKMTLKDISEATELSIGYLSQLERGLTSIAHDTLKKVAKALGVEM TYFMEQPKTKEKAVLRSYEREILRIEGSSIIEYAMTNMADRGEMLPKLVEILPQKEVEES LPYPHEGEEFVYVLEGILTLQIEDDVCDLYPGDCAHYKSTRTHNWSNQTNKVVKFITINT PNLFQEAGEKL >gi|312955911|gb|AENW01000030.1| GENE 31 32945 - 33859 957 304 aa, chain + ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 3 304 5 300 302 207 36.0 1e-53 MKEPTVINIQKYSVHDGDGIRTTIFFKGCLLNCWWCHNPESQRYAPELMFNREKCSGCGY CRKACSHGAITIEEDGTAHTDTDKCVLCADCLDYCLHNNREIVGKQYSIKELMTIVNKDA HFYEESGGGVTLSGGEVMTQDIDYLEELCRQLKDKGYNVAIDTCGYAPKESYARLLPYVD TFLYDIKTLNDEAHKKYMGKSNDVILENLEFLADHRADINIRIPVVVPVNSDADTMLDII TYLKKRIGIVKVNLLPYHNTGSSKYEKLGRVYPAADLGVPSQEHMEMLKSLFEEHGFQQV KIGG >gi|312955911|gb|AENW01000030.1| GENE 32 33863 - 36244 2888 793 aa, chain + ## HITS:1 COG:SPy2049 KEGG:ns NR:ns ## COG: SPy2049 COG1882 # Protein_GI_number: 15675819 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pyogenes M1 GAS # 6 792 12 805 805 462 37.0 1e-129 MELRGMNDRIKKLRKQSEETTPHIFMERAMLMTDAYKKYEGEVSIPELRALSMKEIFSRK TITIEDGELIVGDKGAGPQSTPTFPELCCHTLEDMKVMNDRELICFKVSDEDMKQQEETI IPFWEKRSIRHKIINSMSQEWKDCYEAGIFTEFMEQRGPGHTVGSEKIYAKGFLDYQQDI EEAIAAIDFLNDPEAIEKRDELRGMSIMCDAIMILGKRYAALARELAEKESDPVRKEELL QIAANCDIVPAHKPKTYWQAIQMYWFVHLGVTTELNPWDAYSPGRLDQHLNPFYEADIEA GRLDKSKAKELLECLWVKFNNQPAPPKVGITLKESSTYTDFANINTGGITPDGEDGVNDV SYLILDVMDEMKLLQPSSNVQISKKTPMKFIKRACEISRKGWGQPAFYNTEAIIQELLNA GKSIEDARRGGTSGCVETGAFGREAYILQGYFNLPKILEITLHNGWDPVGGKQLGLQLGE AEDFKSYDELFDAYKKQIEHFADIKVKGSNMITRIYAKYMPAPFLSIITDDCITNGKDYN AGGARYNTNYLQGVGIGTITDSLSAIKYNVYDKKNFTMGELMKALQDNFEGEEHVRLYNL VSRKTPKYGNDDDYADAIMKEVFTFYKNTITGRPNMRNGQWRINMLPTTCHVYFGEVMLA SPNGRLAHKPVSEGISPEKAADVNGPTSVIRSASKMDHLSTGGTLLNQKFTPSVVAGEDG LSNMADLIRSYFNMDGHHIQFNVIDRETLIKAQQNPAEYRDLIVRVAGYSDHFRNLSKEL QDEIINRTEQSFS >gi|312955911|gb|AENW01000030.1| GENE 33 36273 - 37079 1226 268 aa, chain + ## HITS:1 COG:lin0414 KEGG:ns NR:ns ## COG: lin0414 COG0345 # Protein_GI_number: 16799491 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Listeria innocua # 3 266 2 266 266 268 57.0 1e-71 MNKTIGFIGSGNMGGAMIGGIIKAGLTAKENIYVSDINEESLARVRESYGVNTTTDNAQL AKVCDIIVLSVKPFLYPVVINQIKAVVKEDVIIVVIAAGQSSEAVAQLFGREIKIVKTMP NTPALVGEGMAAIAPAKNVTKEEIAEITAIFNSFGKSEIVPEHLMDAVTAVSGSSPAYVY MMIEAMADAAVVEGMPRPQAYKFAAQAVLGSAQMVLETGKHPGELKDMVCSPGGTTIAAV AKLEETGFRSSIMQSMKACADKSREMSK >gi|312955911|gb|AENW01000030.1| GENE 34 37279 - 38214 1009 311 aa, chain + ## HITS:1 COG:no KEGG:CLI_3319 NR:ns ## KEGG: CLI_3319 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 18 301 9 291 291 296 59.0 7e-79 MGVKEKIMDITTIIIGLLIVLLIGYTAFFAYDLIKHKDEFEGDTSWWKTGAIGALVNFFD PLGIGAFAPQTALLKFTKQTRDKLIPGTMNVANCIPVLLQALIFTTVVKVEAWTLVVMLA AAMLGAVLGAGVVSRMSEKKIRLVMGFALACTACIMLASLLKLMPIGGDAIGLAGGKLVI AGIVNFILGALMTAGVGLYNPCMVLVYLLGMSPDVAFPIMMGSCAFLMPPASVKFIKEGA YNRKSALSMAIFGSIATLVASLLIKSLPLDVLKWIVVCVTVYTSTVMLRAGFSKVTEHTA AAKAEAVEIVD >gi|312955911|gb|AENW01000030.1| GENE 35 38524 - 39141 731 205 aa, chain + ## HITS:1 COG:CAC3581 KEGG:ns NR:ns ## COG: CAC3581 COG1011 # Protein_GI_number: 15896815 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Clostridium acetobutylicum # 1 186 1 186 201 97 29.0 2e-20 MIKHIVFDIGNVLMTFAPETYFIRWFQSEEKTHRVCSRIFTHEAWEKYDQGIWMLEDLYA VYHDAYPDMVEETDIVLQNWLQLMQPMQESIAFMKQMKNAGYGIYILSNISQDSADYLKE TQQFFPLADGAVLSYEEKTNKPDPYIFEVLLERYELNAEELLYLDDNVENTRQAEKMGIQ GILFTDEGCIAKAQKLLKEECHVKD >gi|312955911|gb|AENW01000030.1| GENE 36 39128 - 40489 827 453 aa, chain + ## HITS:1 COG:BS_yefA KEGG:ns NR:ns ## COG: BS_yefA COG2265 # Protein_GI_number: 16077741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus subtilis # 21 447 26 453 459 347 39.0 4e-95 MLKIKQMVSGVITGMDEAHNGLLRIGKDIVLVRHVLKQEEVRVRIVRRIAKGYIGEVVEI KRASPFRKPVKCPIYEHCGSCQLLHMNAQGQRVFKNQSMQALCDRAKGMKLQTEDIVMME EPWQYRNKVIIGFQKDRQRRIQAGFYEEFSHRIIPYKCCPLHPEVCDSIIAGIVELMGKL HIEPYNEDQRKGLIRHVVVRYGAVSKQIMIVLVLNSNVFPARRNFIQELRKRFPQITTIV QNVNTRKTSVVLGDEERVLYGPGYIEDVLCGMTFRISAKSFYQINHEQTEVLYQRSVELL ELSGKETVLDAYCGIGTIGMYVSRFVKQVIGVEINRDAVEDAKINAKINQISNIRFVCED AGRYMTRLAAEKKRLDVVIMDPPRSGSSEDFIKSLVRMKPKQVLYISCNPQTQIRDLQMF ERMGYRVQGKLVPVDMFPHTVHVESIVKLVRNK >gi|312955911|gb|AENW01000030.1| GENE 37 40521 - 40901 121 126 aa, chain + ## HITS:1 COG:no KEGG:Arch_1303 NR:ns ## KEGG: Arch_1303 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 1 117 1 117 140 146 82.0 3e-34 MNFKDIISIAAVIATTVVAVVSIFLNHRSNLKHQLFLEKLRIYKELMVIVSQSTSQRANR EELHLRLIAVKQEIILFSTEPIIRKLADIGDINFTNDGQTEVQAKEKFDRYFIFTKLNET RLTETK >gi|312955911|gb|AENW01000030.1| GENE 38 41187 - 41432 64 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225570299|ref|ZP_03779324.1| ## NR: gi|225570299|ref|ZP_03779324.1| hypothetical protein CLOHYLEM_06395 [Clostridium hylemonae DSM 15053] # 12 81 52 121 121 109 71.0 7e-23 MGFILALMKISTICIWDCKAFDAPPTGYQSFVFQTKNLDSTVEWLKGKGLPLADPVRYDR GTNELRLKDIDGNEIVIAEFV >gi|312955911|gb|AENW01000030.1| GENE 39 41506 - 41811 58 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDIKYGVLCFIPSVLLLVFCDSFPNEIATHFNFFGNADIYSSKWYIILLVPVLGFLGHV TYMVILEKRPNRIGRNGIKKYSFLYFPMLTCFAIIFMLWNS >gi|312955911|gb|AENW01000030.1| GENE 40 41965 - 42168 118 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRLKMTHSPCRDGGFDTSTKYVKILCFKHFSEHFVFTDKGVNYKNKELKKYIEVSVVAG IECVDTI >gi|312955911|gb|AENW01000030.1| GENE 41 43186 - 43326 57 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKGMAKNFSVLHNIPDKEIGIGCILCQYGRKLYLSENLVSLQITYI >gi|312955911|gb|AENW01000030.1| GENE 42 43824 - 44468 888 214 aa, chain + ## HITS:1 COG:MT3195 KEGG:ns NR:ns ## COG: MT3195 COG0546 # Protein_GI_number: 15842684 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Mycobacterium tuberculosis CDC1551 # 7 171 9 172 222 73 28.0 3e-13 MNDIKHVVWDWNGTLLDDIDVSMEALNTILKKAQLPLVLDKGEYRKYFQFPVIEYYKKVG FDFEKTPFPMLAKEYMRYYQPHSMACSLHDGVTDMLSQLKKKGVHQYLLSASDLHFLHEQ LDNYDIEQYFEQVRGLDNIHAASKAELAKRFVQESGLNPREVVFIGDSVHDSEVAHGAGC RCILIANGHEDKGKLEKTGCVVVDTIRQCESLMA >gi|312955911|gb|AENW01000030.1| GENE 43 44469 - 45170 713 233 aa, chain - ## HITS:1 COG:no KEGG:Apar_0137 NR:ns ## KEGG: Apar_0137 # Name: not_defined # Def: transcriptional regulator, Crp/Fnr family # Organism: A.parvulum # Pathway: Two-component system [PATH:apv02020] # 27 228 26 239 243 70 27.0 4e-11 MTALQDLLEETKECHHSLLKQLFANCPVEVLQQMQLIRLRKNQNLISTYQTSNPVFVLLD GRLQAIEERVVDIPYSFTELHPVDIVGDYELFTGMEGHYVTLKTMEASCCARLSAASYLH WMKSDANALFLRTQMLMKELSVQTQLQRQYLFMDNRTRLLLFLLRSNGQSGGRIPATRER IAASIGCSVRTCNRIILTLSQEGFVDCIHGKLQISEQQRSAIKKELETSSFSF >gi|312955911|gb|AENW01000030.1| GENE 44 45312 - 46028 831 238 aa, chain + ## HITS:1 COG:UU281 KEGG:ns NR:ns ## COG: UU281 COG0813 # Protein_GI_number: 13357841 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Ureaplasma urealyticum # 3 238 2 238 239 239 54.0 3e-63 MSTPHNAAASGDIAKTVLMPGDPLRAKFIAETYLENPVQFNTVRNMFGYTGTYKGKKISV MGSGMGMASIGIYSYELYKFYEVENIIRIGSAGAYTDTLKLFDLVLADSAWSESTFAKAQ ADVDGDIQTPSAELNAEIEAAAARVNKPLTKARIHSSDVFYHEDNVDGHREFFEKHGCVC VEMESFALFHNAKILNKRAACLLTISDSLVTHAETTAQERQTSFHDMMLVALETAVAL >gi|312955911|gb|AENW01000030.1| GENE 45 46077 - 47267 1423 396 aa, chain + ## HITS:1 COG:BS_drm KEGG:ns NR:ns ## COG: BS_drm COG1015 # Protein_GI_number: 16079407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Bacillus subtilis # 4 384 6 384 394 472 60.0 1e-133 MKPYKRIFTIVIDSLGVGAMPNAAEYDDEGCDTLGHIDASMPKFHIPNLAKLGLANLHPL KHVAPAAEPLGYYTKLLEASVGKDTMTGHWEMMGLHITTPFKTFTETGFPQDLIDELEKR TGRHIIGNKSASGTEILDELAEQEIQNGDLIVYTSADSVLQICGNEETMGVETLYHYCEI ARELTMRPEWMVGRVIARPYTGSKKGEFKRTSNRHDYALKPYGKTALDALKEAGLDVISI GKIKDIFDGEGITQAHKSKSSVHGMEQTIEVMEQDFHGLCFVNLVDFDALWGHRRNPVGY GEELERFDELLGVVLNKLQEDDLLIITADHGNDPTYKGTDHTKEMVPFLAYSPRMEGHGL LPVSDTFAMIGATIADNFEVSMPKNTIGTSCLKQLK >gi|312955911|gb|AENW01000030.1| GENE 46 47512 - 47766 269 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225388429|ref|ZP_03758153.1| ## NR: gi|225388429|ref|ZP_03758153.1| hypothetical protein CLOSTASPAR_02165 [Clostridium asparagiforme DSM 15981] # 11 83 2 76 158 91 58.0 1e-17 MEKEECRVDEIIIKPHHFIDIIKLYGAGIERFIPDEPMGHDFYKVANELIDHPTINVKLT VYDDICRPCKKYNGRCVDALTSIS >gi|312955911|gb|AENW01000030.1| GENE 47 48075 - 50414 2508 779 aa, chain - ## HITS:1 COG:lin0195 KEGG:ns NR:ns ## COG: lin0195 COG1199 # Protein_GI_number: 16799272 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Listeria innocua # 1 778 1 779 779 692 45.0 0 MYRCKMSVRALVESVWIGGDLVSTAPSIERANLGSRIHRMLQSSAQGDYESEVFLKLSSE LDDILFEIEGRADGVRKEDDQVTIEEIKTTAIPFSELNEPVMVHLAQAYCYGHMYLAEHV APSIRIQMTYYQIDTEEIKQFDEEKTREELAAFYMDTLRRYVKWAALSRDLKISSSRTLK ELKFPFPDYRSGQRDFAVAVYKTILDREKLFASAPTGIGKTISTLFPSLKAIGEGKAEKV FYLCAKNVTATVAYDTLRLLYKQEVSFKSVAITAKDKICFQDVRNCDPEVCPYAKGYYDR CQDALYELLQETQFIDREAVEKKAQEHLICPFELSLDASLYGDVIVCDYNYVFDPRVYLK RFFMEKGDYIFLVDEAHNLVDRARSMYSCELNKSAFLAAARNIQKQRKPLHAALRAVNRE FLRLKKQCEEEGQNFIHQKDPISSIRQRLADVIEQMDIYLQSEHEDTWDEELRDLYFSCI NYNRISEFYDEDFVTCYEKQSSDIVLKQLCLNPAHPLKETCAMGRSTVFFSATLSPIDYY LDLLGGTRKTRKLFLPSPFSAEKRKIVLCDAISTRYRNRDSSLHPIAAMIHAAVQAKTGN YIVFLPSYAYMKQVAQTFCEQFPDIHVSLQESGMKEEEKQHFLEHFNTTQELHVLFCVLG GMFSEGIDLKGEKLIGTIIVGVGLPQVNPQQELLREHFDEVNETGYAYAYQVPGMNKVLQ AAGRVIRSHSDIGIVLLIDERFTTPFYQRLLPEHMRPFQIINDPTRLHAAVKQFWQQNS >gi|312955911|gb|AENW01000030.1| GENE 48 50629 - 51582 187 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 84 281 82 264 285 76 28 3e-13 MKEFIINENDADQRVDKFIQKTMKTMPKSLMYKYIRNKKIKVNRKRCEISQRLQVGDTMQ CYIPEEFYEVATMRSFLQVPNALDVVYEDDAVLLMNKPKGLRAHSDTSEVQDNLADRLLH YLYCKKEYDPTTEQSFTPALCHRIDRNTQGLVIAAKTAAALRCMNEKIALRQVEKKYLCI VQGKLKKKQDHIVLYHRKNEQNTAEVIDREREGYTRMETGYRVLQEAERYSLVEVELHSG KSHQIRALMSWLGHPLLGDVKYGARKTKEKTYQALCAYHVAFHFQGDACCLQYLNGRAFE LQDTDIERQFADIARPF >gi|312955911|gb|AENW01000030.1| GENE 49 51997 - 53253 277 418 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 383 9 384 618 111 26 1e-23 MESYRYLLDVALILLSTKVFGLLTRRIEMPQVVGALVAGLLLGPACFNIVQESEFLDHIA EIGVIVLMFSAGLETDISELKKSGRNSFVIAVIGVLVPLIAGYVLASFFNTEPTAFLQNM FIGVILTATSVSISVETLKEMGKLSTPSGNAILGAALIDDILGIVALTIITGMADTSVQL TEVMLKIVAFFVLAVIVGIFARKGIEKLFDRYQKVHRRFSILSFAFCLLFAYVAEAFFGV ADITGAFIAGLIISGTSRCNYVQMRIETLSYLLISPVFFASIGLKVVLPEMSTSIMIFSV LLLVLAILTKIVGCGLGAKLCRYENIQSLRIGIGMVSRGEVALIVASKGMKVGLMNEAFF GPIIIMVVLTTVITPILLKIVFKDRENDPDVYASSELIEDYEKIEQNEKLAQKVLEQS >gi|312955911|gb|AENW01000030.1| GENE 50 54051 - 54362 431 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401023|ref|ZP_06645168.1| ## NR: gi|293401023|ref|ZP_06645168.1| stress response protein NST1 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 102 1 102 103 65 55.0 9e-10 MEEIIRKIVDADKQARARVEQKQQERHNIQNLIQDQSMEIREKYRKETEDCIAKKREQMD ADLQNAMQQEEAAYEESLNALQQKYEEHKEEWVSQIVKRTLAM >gi|312955911|gb|AENW01000030.1| GENE 51 54402 - 55448 1377 348 aa, chain + ## HITS:1 COG:no KEGG:ACL_1174 NR:ns ## KEGG: ACL_1174 # Name: ntpC # Def: V-type H+-transporting ATPase, subunit C (EC:3.6.3.14) # Organism: A.laidlawii # Pathway: Oxidative phosphorylation [PATH:acl00190]; Metabolic pathways [PATH:acl01100] # 1 348 1 343 343 154 27.0 4e-36 MSMAEGVIVAKARSMHGEALSEEMYQELLHKKSVAEIAGYLKHETSYAAALKDVRENNIH RGQLESILRQEIFKKTMKLYRYADAAMKPYYRLHMQQIEIDLILSRIRVLISREYEAAIA EFPIFLKSYTSFDLLRLGNVHSYDELLDVLKHTMYYAVLLPYRVKKGEENDIDYTKIETQ LQMQHYTHTFQVIDKTLKGKSRKAVKQYFATQIELSNIEKIYRYKKYFNAREDVIRESLV PVHEHLSAAFVEELIAQPNARAFIKLLQSSTYRLGIEDMEKDYVYIEHYTDSFLYALAKK NIYYSLDAPLVYSSYLYTAERELENIINIIEGVRYHVSIEDMERMLIY >gi|312955911|gb|AENW01000030.1| GENE 52 55463 - 57385 2052 640 aa, chain + ## HITS:1 COG:APE0673 KEGG:ns NR:ns ## COG: APE0673 COG1269 # Protein_GI_number: 14600881 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Aeropyrum pernix # 206 638 215 672 686 108 23.0 4e-23 MAISKMKLVNILADNEYLNDVLLKFVELDYFHPEPASKFVDSVHGLTTLSDENPITDVLT HFNEVLQDMDMTLPVKDVKNGAYDLEGIRKYIDSIHERFENGAAIRRELETVIQENRDAL TQVRNIESIDLNLDDLFECKYIKIRFGRLPIDSVEKLQYYRNRPFVFKSFSTDDTYSWCV YFTTAKYEGDVDNIFSSLYFERIRIPEFVHGNPIQAKENLQEEIDNDLKQLQHVNEVIEA LKAECIDNFADIKAELEFINHTFEARKYVLGLGERFSITGFVVEEDVPKLKESFSNLKEV EIEVRPAHSDKRLSPPTKLKNGWFARPFSMFVEMYGTPEYEGIDPTPFVAFTYSLLFGIM FGDLGQGFVLILVGYLFYKWKGMRLGEIGMRIGIFSSIFGIVYGSVFGNEELLNPLYKTV FGLSEKPVEVMTSNFIPVLLVMAVGLGAVLIVISIGINLYLQIKNKNYGELFFSQNGIAG LVFYISLVGGGAYQLLSGVSVITNPVFAIVFLLVPLVLIFLKEALERKMEKKEMFPDGFG GFFVESFFELFEICLSFITNTISYLRVGGFVLSHAGMMMAVMLIMDMAGGAGWIVMILGN IFVMCLEGMIVGIQVLRLEFYEMFSRYFTGNGIMFKSLND >gi|312955911|gb|AENW01000030.1| GENE 53 57400 - 57843 597 147 aa, chain + ## HITS:1 COG:no KEGG:ACL_1172 NR:ns ## KEGG: ACL_1172 # Name: not_defined # Def: integral membrane protein # Organism: A.laidlawii # Pathway: Oxidative phosphorylation [PATH:acl00190]; Metabolic pathways [PATH:acl01100] # 14 143 13 143 150 62 51.0 3e-09 MLNMFELLLPLILIALISLPLVNVFRGKKSVSVAKRRMITHVCFFFAIVLGTVFFSATKA YAAGADDVTMKMAGSIGQGLGFIAAALATGLSALGAGIAVAAAAPAAIGAFSENEKNFGK SMIFVALGEGVAIYGLLISIFIIFMKL >gi|312955911|gb|AENW01000030.1| GENE 54 57862 - 58170 438 102 aa, chain + ## HITS:1 COG:no KEGG:ACL_1171 NR:ns ## KEGG: ACL_1171 # Name: ntpG # Def: V-type H+-transporting ATPase, subunit F (EC:3.6.3.15) # Organism: A.laidlawii # Pathway: Oxidative phosphorylation [PATH:acl00190]; Metabolic pathways [PATH:acl01100] # 1 102 1 102 104 117 58.0 9e-26 MKFYLLSDNIDTQMGMRLAGIEGVVVHERHEVLEELERVMHMEDIAIVLMTTKLIETCPE VISELKLKQKKPLIVEIPDRHGSAKIGETIDRYVSEAIGVKL >gi|312955911|gb|AENW01000030.1| GENE 55 58181 - 58777 814 198 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401018|ref|ZP_06645163.1| ## NR: gi|293401018|ref|ZP_06645163.1| hypothetical protein HMPREF0863_01303 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 198 1 198 198 192 55.0 1e-47 MLDDKIKLEQYFEEEIKRVSDIEIAGIEQEIDEIRKKSMEGLELEAQREAGLTREQELKE MASEHAIRLSKAHEETNRRLMKKRRELTDAVFRAAKQQLKEFAIRKDYVELLKKKASDLA QLGYEQVVFYVADRDQAVLKDICEAYGKPCEGKCDADILLGGFRMECEEKGIVVDETFDT GIDEQKDWFYTNSGLFIK >gi|312955911|gb|AENW01000030.1| GENE 56 58812 - 60563 2079 583 aa, chain + ## HITS:1 COG:MK1017 KEGG:ns NR:ns ## COG: MK1017 COG1155 # Protein_GI_number: 20094453 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Methanopyrus kandleri AV19 # 6 576 9 581 592 625 54.0 1e-179 MSENVIYSINGPVVKVQNAVDFSMLEKVYVGHKRLMGEVISISKEATTIQVYESTTGLKP GEPVEPTGSPISVTLGPGILRNIFDGIERPLKEIAKESGAFIATGSDVAPLDEEVLWDVT VKVSVGDEVVPGQIFATLPETDLIEHRCMIPPTLYGTVVEAAENGTYSINQCILKVKDEK DKLHELTLVQKWPIKTARPVAERLPISVPLITGQRIFDTLFPIAKGGTAAIPGGFGTGKT MTQHQLAKWCDADIIVYVGCGERGNEMTQVLEEFSELIDPKSNRPLTDRTVLIANTSNMP VAAREASIYTGLTLAEYYRDMGYHVAIMADSTSRWAEALREISGRLEEMPAEEGFPAYLP SRISQFYERAGYMKTLNDQVGSVSIIGAVSPQGSDFSEPVTQNTKRFVRCFWALDKQLAY ARHYFAINWTESYSEYVTDLTKWYNKNVDMRFLRSRQEIMSLLAEEAKLMEIVKLIGSDV LPEDQKLVIEICKVIRVGYLQQNAFHKDDTYVPLQKQMKMMDVILYLYKKCKDLVAQGKP MSQVVASGIFDKVTKMKYDVPNDHIELLDDYFRQIDAAVSQVA >gi|312955911|gb|AENW01000030.1| GENE 57 60576 - 62018 1746 480 aa, chain + ## HITS:1 COG:TP0528 KEGG:ns NR:ns ## COG: TP0528 COG1156 # Protein_GI_number: 15639518 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Treponema pallidum # 5 454 6 454 480 573 60.0 1e-163 MSLQYVGLSEINGPLVFLDNVENASYEEMVEIKCGDGTTRLGRVVQLEGRKAAIQVFEGT NGISLKNTKTKFTGKPMELALSREMLGRTFNGSGQPIDGLGEIYAEKSADINGQPLNPVS RVYPRNYINTGISSIDALTTLIRGQKLPIFSGSGMPHNELAVQLVKQAKISEGDGKNFCI VFAAMGVKNDVADYFKRSFEEAGVMEKVVMFINLSNDPIIERTLTPRCALTAAEYLAYEQ DMHVLVILTDITSYCEALREFSSSKGEIPGRKGYPGYLYSDLASLYERAGIVKGAGGSVT QIPILTMPNDDITHPIPDLTGYITEGQIVLDRNLNQMGVYPPVGVLPSLSRLMKDGIGEG FTRKDHSDVSNQLFAAYAKVQDARSLASVIGEDELSDVDKQYMSFGTLFEEHFLNQGFDD NRSIEETLDLGWDLLSVLPRAELDRVDNEVLEVYYDHERAVKRFGLKSGPIIKELASQGN >gi|312955911|gb|AENW01000030.1| GENE 58 62021 - 62683 809 220 aa, chain + ## HITS:1 COG:PH1972 KEGG:ns NR:ns ## COG: PH1972 COG1394 # Protein_GI_number: 14591709 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Pyrococcus horikoshii # 5 207 6 213 214 100 32.0 2e-21 MANKQVFPTKGNLIATKKSNDLAHMGYELMDRKRNILTREMMSLMDDVKLLRDKITITYQ KAYYALQQANMSLGVISDLVEAVPVDTGIHISYRSVMGVEIPKIQYDKQEYKLTYGLDHA NSKLDYAYRCFYKVKEMTVILAEVENSVYRLANAIRKAQKRANALKNIVIPDFEHNIKFI TDALEEKEREEFSRQKVIKATKDRRKAEESATQCHQLKVS >gi|312955911|gb|AENW01000030.1| GENE 59 62804 - 64030 299 408 aa, chain - ## HITS:1 COG:no KEGG:LBJ_0077 NR:ns ## KEGG: LBJ_0077 # Name: not_defined # Def: transposase ISLbp1 # Organism: L.borgpetersenii_JB197 # Pathway: not_defined # 1 404 14 414 418 112 25.0 3e-23 MPHIFMQMLATTGKSQKNEISDFIEQVDENIEISQTGYFNARMKFNPDALRTILHDINRD VYAEKKLLKLNDYYIMAIDGSDFLIPKWRDNKEVWKTKLHDGDNDPVMGSASSIFDVINK CIIDISINSYKYSEKSSAEDHLGYARDILPQGSKMVCIFDRGYPSIKLIDQMLESGQYFV FRLKANDFKRECEELRDDEDDKWIDVIYDRLRSNHFREDRSFRIKLMNTTYHLRFVKFQI VLNDGRTATEILLTNLSETDFDTESMKELYHLRWDIETCYRSMKSQLKMEEFSGYREQLI KQDIYACALVYNAVSDIVCSKENLSTIQQERYKYEMAFNRNYASGKLKHYLLKIFVYYDH PKLAKKASVKMDKEMMRHLCPIRQDRNSIYSRQKKRLNKHRMTYRYSY >gi|312955911|gb|AENW01000030.1| GENE 60 64153 - 64344 140 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYVRTWKKGSKIYASIVKSTRNGTKVSQETVAYLGEVTFDQIPYLKAAYAKNKPLLVYPE ESL Prediction of potential genes in microbial genomes Time: Sat May 14 02:19:32 2011 Seq name: gi|312955909|gb|AENW01000031.1| Clostridium sp. HGF2 contig00024, whole genome shotgun sequence Length of sequence - 1981 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 60 - 1136 443 ## Swol_1745 transposase - Prom 1235 - 1294 4.5 Predicted protein(s) >gi|312955909|gb|AENW01000031.1| GENE 1 60 - 1136 443 358 aa, chain - ## HITS:1 COG:no KEGG:Swol_1745 NR:ns ## KEGG: Swol_1745 # Name: not_defined # Def: transposase # Organism: S.wolfei # Pathway: not_defined # 1 342 232 569 570 323 47.0 9e-87 MDADGFPLAFDLHPGKQNEQKTLKPLEQKVIRDFDCAEFIYCSDSGLGSQNNKLFNDMGG RSYVVTQSLKKLRKEDRITALDPKQYRKLGSEKFIDLRELDENDPEVYRSIYYKEIPIES KKLSETMIVTYSPKYKAYQAKIRQGQIERAMKMIDDNGKKFKKNRHNPNDPARFIKKTAI TADGEVAEEEYCQLNQAAIDKEAMYDGFYAVMTDIEGDVSEIITINERRWQIEECFRIMK TDFEARPVYLQREDRIKAHFLICFLALLIYRILELKLDKKYTTENIIATLRRMDVCALDA YGYIPVYKRTDLTDDLHELFGFRTDTQIIKKAKMRSIIHQSKVANQLLYSSAKPKTQD Prediction of potential genes in microbial genomes Time: Sat May 14 02:19:37 2011 Seq name: gi|312955907|gb|AENW01000032.1| Clostridium sp. HGF2 contig00054, whole genome shotgun sequence Length of sequence - 1271 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 24 - 83 4.5 1 1 Op 1 . + CDS 294 - 707 95 ## CLK_A0213 hypothetical protein 2 1 Op 2 . + CDS 704 - 1219 124 ## EUBREC_2048 hypothetical protein Predicted protein(s) >gi|312955907|gb|AENW01000032.1| GENE 1 294 - 707 95 137 aa, chain + ## HITS:1 COG:no KEGG:CLK_A0213 NR:ns ## KEGG: CLK_A0213 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 8 128 6 126 155 158 63.0 6e-38 MKGNKVMKRILDVCCGSKMFYFNKNNPLVHFNDLRKLEEPLCDGRMLKIHPNTQWDFRHL PVPDNTYDMVVFDPPHLVKVGDNSWLAKKYGKLPPEWKPYLKQGFDECMRVLKPYGTLVF KWNETDIKQIYRREVQQ >gi|312955907|gb|AENW01000032.1| GENE 2 704 - 1219 124 171 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2048 NR:ns ## KEGG: EUBREC_2048 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 25 170 28 153 161 107 40.0 2e-22 MTRKEITILLGDILYQQRFTGVGKYYASEVTIDYGTKDMCRVDYMQFIPPNQMSISGLEK GIFICYEVKSCLGDFKSGHGQNYIGEENYLVMPMELYKKVIHDIPHDIGVLVPVPSTLGR KNSDCWQEFDNPTEFKGNSNDWRLHKIRDAYPKHRKKSMTELLFCMLRSGR Prediction of potential genes in microbial genomes Time: Sat May 14 02:19:51 2011 Seq name: gi|312955869|gb|AENW01000033.1| Clostridium sp. HGF2 contig00013, whole genome shotgun sequence Length of sequence - 34967 bp Number of predicted genes - 40, with homology - 32 Number of transcription units - 14, operones - 9 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 130 - 558 192 ## MA0739 hypothetical protein 2 1 Op 2 . - CDS 573 - 773 131 ## gi|167748586|ref|ZP_02420713.1| hypothetical protein ANACAC_03359 3 1 Op 3 . - CDS 791 - 2692 1388 ## COG2200 FOG: EAL domain - Prom 2819 - 2878 6.2 - Term 3934 - 3980 5.1 4 2 Tu 1 . - CDS 4085 - 4669 263 ## COG4974 Site-specific recombinase XerD - Prom 4835 - 4894 4.2 5 3 Tu 1 . - CDS 5354 - 5560 149 ## CD0356 excisionase - Term 5856 - 5902 1.5 6 4 Op 1 . - CDS 5951 - 6184 154 ## CD0358 hypothetical protein 7 4 Op 2 . - CDS 6181 - 6600 295 ## CD3371 conjugative transposon protein - Prom 6711 - 6770 8.3 + Prom 6993 - 7052 9.3 8 5 Tu 1 . + CDS 7111 - 7470 355 ## CD2002 hypothetical protein + Term 7520 - 7565 -0.3 - Term 7449 - 7481 -0.2 9 6 Op 1 . - CDS 7561 - 7785 332 ## CD0369 hypothetical protein 10 6 Op 2 . - CDS 7792 - 9477 352 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 9498 - 9557 11.3 - Term 9521 - 9556 2.1 11 7 Tu 1 . - CDS 9563 - 10072 180 ## EUBREC_3045 hypothetical protein - Prom 10179 - 10238 6.6 12 8 Op 1 . - CDS 10256 - 11164 768 ## CD0371 conjugative transposon protein 13 8 Op 2 . - CDS 11182 - 12189 596 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 14 8 Op 3 . - CDS 12186 - 14375 632 ## CD0373 conjugative transposon protein 15 8 Op 4 . - CDS 14375 - 16825 1419 ## CD3383 conjugative transposon protein 16 8 Op 5 . - CDS 16797 - 17201 254 ## CD3384 conjugative transposon membrane protein - Term 17229 - 17264 2.1 17 9 Op 1 . - CDS 17317 - 17820 470 ## CD3385 conjugative transposon protein 18 9 Op 2 . - CDS 17838 - 18341 521 ## CD0377 conjugative tansposon protein 19 9 Op 3 . - CDS 18287 - 18556 147 ## gi|210618406|ref|ZP_03291952.1| hypothetical protein CLONEX_04185 - Term 18578 - 18621 -0.2 20 9 Op 4 . - CDS 18632 - 18853 281 ## CD3387A conjugative transposon protein 21 9 Op 5 . - CDS 18854 - 18997 182 ## gi|261207856|ref|ZP_05922541.1| conserved hypothetical protein 22 9 Op 6 1/0.000 - CDS 19010 - 20206 642 ## COG2946 Putative phage replication protein RstA - Prom 20279 - 20338 2.9 23 9 Op 7 . - CDS 20390 - 21784 703 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 24 9 Op 8 . - CDS 21802 - 22185 382 ## CD3390 conjugative transposon protein 25 9 Op 9 . - CDS 22201 - 22530 272 ## CD3391 conjugative transposon protein 26 9 Op 10 . - CDS 22552 - 22755 72 ## CD0385A hypothetical protein 27 9 Op 11 . - CDS 22768 - 25827 1498 ## CD3392 putative collagen-binding surface protein - Prom 25897 - 25956 4.0 - Term 25883 - 25917 -0.9 28 10 Op 1 . - CDS 26048 - 26269 109 ## 29 10 Op 2 . - CDS 26295 - 26537 152 ## - Prom 26601 - 26660 6.5 + Prom 26701 - 26760 9.8 30 11 Op 1 . + CDS 27008 - 27511 119 ## gi|283768518|ref|ZP_06341430.1| hypothetical protein HMPREF9013_0989 + Term 27522 - 27551 -0.3 + Prom 27653 - 27712 10.7 31 11 Op 2 . + CDS 27789 - 28169 193 ## gi|293402332|ref|ZP_06646469.1| hypothetical protein HMPREF0863_02610 - Term 29166 - 29200 1.2 32 12 Op 1 . - CDS 29201 - 29767 220 ## 33 12 Op 2 . - CDS 29779 - 30042 90 ## - Prom 30064 - 30123 9.6 - Term 30096 - 30149 7.2 34 13 Op 1 . - CDS 30154 - 31074 508 ## COG3942 Surface antigen 35 13 Op 2 . - CDS 31071 - 31529 519 ## gi|293399981|ref|ZP_06644127.1| putative holin 36 13 Op 3 . - CDS 31595 - 31720 90 ## 37 13 Op 4 . - CDS 31720 - 32151 257 ## 38 13 Op 5 . - CDS 32170 - 32796 336 ## 39 13 Op 6 . - CDS 32814 - 33275 250 ## - Prom 33357 - 33416 3.5 40 14 Tu 1 . - CDS 33467 - 34966 265 ## CA_C1879 hypothetical protein Predicted protein(s) >gi|312955869|gb|AENW01000033.1| GENE 1 130 - 558 192 142 aa, chain - ## HITS:1 COG:no KEGG:MA0739 NR:ns ## KEGG: MA0739 # Name: not_defined # Def: hypothetical protein # Organism: M.acetivorans # Pathway: not_defined # 1 101 90 188 219 66 33.0 3e-10 MVRLQGRSIRLSQQEYWIHRIFDENPSMKDVYPGNSFSILDAFVVCDAQLEFFDLGRQPI ERRYFTIGEASMPKKGFMIQESCIQCGSCIRHCPSSALCVGNPAISGRTIACIAVCAQRF VLFMRSSEDKGNSCFCCNEKNV >gi|312955869|gb|AENW01000033.1| GENE 2 573 - 773 131 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167748586|ref|ZP_02420713.1| ## NR: gi|167748586|ref|ZP_02420713.1| hypothetical protein ANACAC_03359 [Anaerostipes caccae DSM 14662] # 1 52 14 65 216 80 67.0 2e-14 MQAGDCLQILREIKDVSFASVDEQGNPQVRIIDVMLVEGDKLYFCTSRGRIFTGSCFSIR KLRLPE >gi|312955869|gb|AENW01000033.1| GENE 3 791 - 2692 1388 633 aa, chain - ## HITS:1 COG:alr1230_2 KEGG:ns NR:ns ## COG: alr1230_2 COG2200 # Protein_GI_number: 17228725 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Nostoc sp. PCC 7120 # 381 616 23 258 266 164 34.0 5e-40 MKKGWLFSLLGIFLCLILLGGVTINSIYRVQRHGRLINYTGIVRGASQKLVKMELNDIHG DDLIVYIDDIVNSLCTGRGAYDLPLPDDADYLDELHQTKEAWEQLKQQIYAVRTSRNDQN VKQQLLQDSEDFFQTTNDMVFAAESFTEQHAKRLMLLDIIMFLSVLALWVFIFITNIRKI LRLETTNRQLKDTAGRDTLTKAYTLEYFITSAEQLMKSNTKFKYALFYVDFSDFKYINDV FGYANGDNLLKHYAALLIKDKEHDELVGRINADNFIILRHYNSRAELTKRQSAVDAAIRD YMRSHLDRQALSISCGICCLEDVDEKLNLNELLNRANFARKMVKNGHELNNYCFYDESIR QHLLEEKSIESGMEEALSSRQFEVFYQPKVCMRTAEIAGSEALVRWRTQKGTLRMPDQFI PAFEKNRTIPQLDQYVFESVCVWLRKLLDEGKPVLPVSINVSRLQFCNMDFVETYAGIKK SYAIPDGLLEIEFTESVMFDNWERLTSIVDQLHSCGFACSIDDFGKGYSSLGMFKNLNVD VLKIDALFFHNLETEEKDRLLVESIIQLVRQFGVKTVAEGIETRGQIEILKHMRCDYIQG YVYYKPMPQKEYEKLLLQLFPLCAQEAVTVCPV >gi|312955869|gb|AENW01000033.1| GENE 4 4085 - 4669 263 194 aa, chain - ## HITS:1 COG:BS_codV KEGG:ns NR:ns ## COG: BS_codV COG4974 # Protein_GI_number: 16078677 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Bacillus subtilis # 16 187 142 291 304 72 28.0 7e-13 MRSDVCYRKYYDEVIILLRTGLRISEFCGLTVKDLDFTNRVINIDHQLIKLSKTGYVVQP PKSENGIRQIPMSDEVYQAFQNILKHRRKPKNLVIDGYSDFLFINRNGNPQVAVNYETVF RKLVDKYNSKYEEPLPKITPHVMRHTFCTRLANAGMNPKALQYVMGHSNITITLNLYTHA SLETVKSELQRFVA >gi|312955869|gb|AENW01000033.1| GENE 5 5354 - 5560 149 68 aa, chain - ## HITS:1 COG:no KEGG:CD0356 NR:ns ## KEGG: CD0356 # Name: xis # Def: excisionase # Organism: C.difficile # Pathway: not_defined # 2 68 1 67 67 99 77.0 5e-20 MINNTDVPIWEKYSLTLEEASKYFRIGEKKLRRLVEENPDADWFVMNGNRIQIKRKPFEK FFDTLNVI >gi|312955869|gb|AENW01000033.1| GENE 6 5951 - 6184 154 77 aa, chain - ## HITS:1 COG:no KEGG:CD0358 NR:ns ## KEGG: CD0358 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 9 74 10 75 84 73 54.0 3e-12 MKKHEHLPFEVILSATEGEPEAVETVLKFYDGYISKLCLRKLYDEYGNVCMVVDADLKNR VQTALLDMLMNFEIVVM >gi|312955869|gb|AENW01000033.1| GENE 7 6181 - 6600 295 139 aa, chain - ## HITS:1 COG:no KEGG:CD3371 NR:ns ## KEGG: CD3371 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 137 1 137 138 117 45.0 1e-25 MKTSSFKQAIEAQFDCLSKKVIKRAVKKGYRDMKRREKRECPFSDIPDYEQERFGTFDKY ESDYTVFNILGIEVWVEDDQLSEALKTLTEKKRNIILLSYFMDMSDSEISEFIKIPRSNV QYHRTKTLETMKKIMEERK >gi|312955869|gb|AENW01000033.1| GENE 8 7111 - 7470 355 119 aa, chain + ## HITS:1 COG:no KEGG:CD2002 NR:ns ## KEGG: CD2002 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 119 1 119 119 186 87.0 2e-46 MRKNKETQTFDFRPLGLAIREAREKAGLSRNDLGDKVFYGERHIADIENIGSHPSFQLFH DLVTMFNISVDEYFYPPEKVEKSTARRQIETSLDLLSDNELKIIQGTIDGILNSRESKK >gi|312955869|gb|AENW01000033.1| GENE 9 7561 - 7785 332 74 aa, chain - ## HITS:1 COG:no KEGG:CD0369 NR:ns ## KEGG: CD0369 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 74 8 81 81 92 82.0 6e-18 MIDLKKHDIKKALKVGAKASGVPVETIREEIQATIDEAMNSTDPEVQANFKKYFGNKRPT PEEYIYKITKKTKV >gi|312955869|gb|AENW01000033.1| GENE 10 7792 - 9477 352 561 aa, chain - ## HITS:1 COG:SP0137 KEGG:ns NR:ns ## COG: SP0137 COG1132 # Protein_GI_number: 15900076 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 531 1 531 538 204 28.0 5e-52 MKFYIKQNKILFLLTILTSVIASLGYVFMAVLLQRLLDIVVEKNMQQFMRMILFSIVYFV LLGIFLYLQSLLNKKVICRIMRQVRSDVFRGTVNYSIEEFEKRNTADYISIITNDVKMIE DNFLLPFFEIVQYTVIFISSFVLMIYFDIIVTICVIIAIAIMFLVPSLLGQKLEKRQNIF SSKLADFTSSLKDILSGFEIIKSYSMKRYVVQRFDKENSETIHSKYDVDKLLALNEGLSS FLALMVQIVVLFLSAYFIITERITIGTLLGMVQVSSNLANPLIMIFTNVPKIKSIQPIIE KLHSISEQASKNLHKEHRASFNRYILAENLSFSYDMQTQVLNEVDCIIEKGKKYAVVGKS GCGKSTFIKLLTGYYSDYKGKIVYDDRELDLLEKEDVVQLSSIIHQNIYLFDETILDNIC LHEDYPKEIVDKVIKESGLDEFIAELPEGIFYRVGENGSNLSGGQKQRIAVARALIRNKP ILILDEGTSAIDMQTAYDIESRLLKINDLTLITITHNLEEKLLKKYDEIIYMDNGNIKEQ GHFQELVNASSCFSEYVHLKE >gi|312955869|gb|AENW01000033.1| GENE 11 9563 - 10072 180 169 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3045 NR:ns ## KEGG: EUBREC_3045 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 164 39 202 208 136 43.0 2e-31 MGGLTRGAFYHHFKSKEEVFDALCEKLFYETNPFKKAKNHKELNGLEKLKFVLKTSFDET EHHQLSIASMQLMGSPAFLKKLIESNQELAPMYQELIEEGIQDGSIHTEHSKLLAELFVL LTNFWSIPTIYPMTSEEMWEKFLMIKEITDKLGLPIIDDEIVELCKENS >gi|312955869|gb|AENW01000033.1| GENE 12 10256 - 11164 768 302 aa, chain - ## HITS:1 COG:no KEGG:CD0371 NR:ns ## KEGG: CD0371 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 302 1 302 303 495 90.0 1e-139 MFRKNKKQTENVKEPKEKKVRTFKVGTHKKSVIALWAVLIASVSFGVYKNFTAIDMHTVH ETETIQLRLNDTSGIENFVKNFAKSYYTWNNSKEAIEARTQAISGYLTKELQDLNVDTIR TDIPTSSTVTEVLVWSIEQSGTDTFSATYEVDQQIKEGEQTTSVKATYTVKVHVDADGNM VIVQNPTLAPAIEKSDYEPKTPEADNSVDADTINDATAFLETFFKLYPTSTEKELAYYVS GNALEPIGRDYLYSELVNPIFTKDGDNVKVKVSVKFLDNQTKATQISQYELTLHKDGNWK II >gi|312955869|gb|AENW01000033.1| GENE 13 11182 - 12189 596 335 aa, chain - ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 212 334 2 124 124 132 54.0 7e-31 MRLKHIAIIGSLFPILISIVLFFGVLISAEDDDGGGNYSSSFGGMNLSAEVLKHQPMVEK YAKEYGISEYVNVLLAIIQVESGGTAEDVMQSSESLGLPPNSLDTESSIKQGCKYFASLL SSCKSQGIDDLNVAIQSYNYGGGYVGYVAGKGKKHTYTLAENFAKEKSGGKKVTYTNPIA VAKNGGWRYSYGNQFYVELVNQYLTVPQVSGELAQKVMNEALKYQGWKYQYGGSNPNTSF DCSGLTQWCFGKAGISLPRTAQMQYDATQHIPLSQAKAGDLVFFHSTYDAGSYVTHVGIV ISPTQMYHAGDPIGYADLTNSYWQQHLIGAGRVKQ >gi|312955869|gb|AENW01000033.1| GENE 14 12186 - 14375 632 729 aa, chain - ## HITS:1 COG:no KEGG:CD0373 NR:ns ## KEGG: CD0373 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 729 2 736 736 1230 89.0 0 MKERIKGAFTRKKVFHALKITLFVIGVTLIFLSMLGTVAHATGLVDDTINAENLYSKYPL SNYQLDFYVDNSWSWLPWNWLDGIGKSVQYGLYCITNFVWTISLYLSNATGYVVQEAYKL DFINDMADSIGKSIQTLAGVTENGFSSTGFYVGFLLLIILVVGMYVAYTGLIKRETSKAL HAVINFVVVFILSASFIAYAPDYIKKVNDFSSDISTASLDLGTKIMLPNSDSEGKDSVDL IRDSLFSIQVQQPWLLLQFGNSNMEEIGAERVEALVSASPEDEDGETREEVVKTEIEDND NNNLTIPQVINRLGMVFFLLFFNLGITIFVFLLTGMMIFSQILFIIFAMFLPISFLLSMI PSYESMAKQAIVRVFNTIMTRAGITLIVTVAFSISSMFYNISTDYPFFMIAFLQIVCFAG IYMKLGDLMSMFSLNAGDSQSMGRRIFRRPYLFMRHRARHMEHRIARAVSAGGITGGVAG AVAGSAVAGKRTERKNTASKENRGNTTSSMGQRAGSKVGAVLDTKNKVKDKANAVKENIK DMPTQTAYAVHTAKEKAKSSVSDFKRGIVQEQKERQSGRLEKQQQHRQNIADKRMELQKA QEARQERTHTDGSATKGATRPHERPATTAKPSVEKMQEVKRPATATTAKTSEPVKTNAVK ERPLSSDGSDGKTPQTNHKNVEKTVSQETRQNYTKDRRTKVQQTQTMKQSEVNTKKNRKT VLQKGRKKK >gi|312955869|gb|AENW01000033.1| GENE 15 14375 - 16825 1419 816 aa, chain - ## HITS:1 COG:no KEGG:CD3383 NR:ns ## KEGG: CD3383 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 816 1 816 816 1522 96.0 0 MFPMKYIDNNLVWNKDNEVFAYYELIPYNYSFLSAEEKFIVHDSFRQLIAQSREGKIHAL QIATESSIRSMQEQSKRLVTGKLREVALEKIDEQTEALVSMIGDNQVDYRFFFGFKLMVT EEQLNLKNLKKSAWLTFKEFLHEVNHTLMNDFVSMPNDEINRYMKMEKLLENKISRRFKV RRLEINDFGYLIEHLYGRDGIAYEDYEYQLPKKKFKRETQIKYYDLIRPTRCVIEENQRY LRLEHEDKESYVSYFTVNAIVGELDFPSSEIFYFQQQQFTFPVDTSMNVEIVENRKALTT VRNKKKELKDLDNHAYQAGSETSSNVVDALDSVDELETDLDQTKESMYKLSYVIRVSADS LDELKRRCDEVKDFYDDLNVKLVRPAGDMLGLHSEFLPASKRYINDYVQYVKSDFLAGLG FGATQQLGETSGIYIGYSVDTGRNVYLQPSLASQGIKGTVTNALASAFVGSLGGGKSFCN NLLVYYSVLFGGQAVILDPKSERGNWKGTLPEIAHEINIVNLTSDKDNAGLLDPFVIMKN VKDAESLAIDILTFLTGISSRDGEKFPVLRKAVRAVTQSEKRGLLHVIEELRKEDTAISR NIADHIDSFTDYDFAHLLFSDGTVENAISLDNQLNIIQVADLVLPDKDTTFEEYTTIELL SVSMLIVISTFALDFIHSDRSIFKIVDLDEAWAFLNVAQGETLSNKLVRAGRAMQAGVYF VTQSSGDVSKESLKNNIGLKFAFRSTDINEIKQTLEFFGIDKDDENNQKRLRDLENGQCL LQDLYGRVGVVQIHPVFEELLHAFDTRPPVKRNEVE >gi|312955869|gb|AENW01000033.1| GENE 16 16797 - 17201 254 134 aa, chain - ## HITS:1 COG:no KEGG:CD3384 NR:ns ## KEGG: CD3384 # Name: not_defined # Def: conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 132 1 132 132 229 93.0 2e-59 MKKIKSYTGIWNVEKVLYAINDFNLPFPVTFTQITWFVITEFLIILFGDLPPLSMIEGAF LKYFGIPVFLTWFMSQKTFDGKKPYSFLKSQITYALRPKITYAGKAVKLDKQILHENITA VRSVNYVPDEIYRQ >gi|312955869|gb|AENW01000033.1| GENE 17 17317 - 17820 470 167 aa, chain - ## HITS:1 COG:no KEGG:CD3385 NR:ns ## KEGG: CD3385 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 167 1 167 167 271 91.0 5e-72 MIDDMAVYIANLGKYNEGCLVGAWFTFPIDEEDVKEKIGLNEQYEEYAVHDTENFPIDIG EYVSIEELNEMYEMIEELPDYIVDCLDEFISHYGTLEEVMEHKDDIYFYPDCDTMTDVAY YYIDELQALGDIPTSLQNYIDYEAFGRDLDIGGCFIETSYGMCEIPY >gi|312955869|gb|AENW01000033.1| GENE 18 17838 - 18341 521 167 aa, chain - ## HITS:1 COG:no KEGG:CD0377 NR:ns ## KEGG: CD0377 # Name: not_defined # Def: conjugative tansposon protein # Organism: C.difficile # Pathway: not_defined # 1 167 1 167 167 269 92.0 3e-71 MQETRVLVETKRKTDSEVTAYWFDLPIDIAEFEEKLGIGAESQDYRIIEKVLPYADEVHE HTSVYQLNELDYMYRQLSSDMQEEYTALLTVFENLEALYICRNVITVYHDCKSMIDVARQ KLMNDPTFKHLSEDCQEYYFDFEAYASHLLENRRYLVTEHSVFELPQ >gi|312955869|gb|AENW01000033.1| GENE 19 18287 - 18556 147 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|210618406|ref|ZP_03291952.1| ## NR: gi|210618406|ref|ZP_03291952.1| hypothetical protein CLONEX_04185 [Clostridium nexile DSM 1787] # 1 89 1 89 98 132 84.0 8e-30 MNDIFKDMQAKIGCEYISDLPSYKRQVWHEMKRLNLARYSKKQLEDFSKYVFGTSYQTLL NVMKQQKGREEQCRKQGCWWKRSERLTAK >gi|312955869|gb|AENW01000033.1| GENE 20 18632 - 18853 281 73 aa, chain - ## HITS:1 COG:no KEGG:CD3387A NR:ns ## KEGG: CD3387A # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 73 1 73 73 104 97.0 9e-22 MNFGQNLYQWFLSNAQSLVLMAIVVIGIYLGFKREFSKLIGFLVVALVAVGLVFNAGGVK DVLLELFNKIIGA >gi|312955869|gb|AENW01000033.1| GENE 21 18854 - 18997 182 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261207856|ref|ZP_05922541.1| ## NR: gi|261207856|ref|ZP_05922541.1| conserved hypothetical protein [Enterococcus faecium TC 6] # 1 42 1 42 47 68 97.0 1e-10 MWELGKDLLLVSLGMGIGVVLMCIISVGKEADRHMEEIKENKESEDN >gi|312955869|gb|AENW01000033.1| GENE 22 19010 - 20206 642 398 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 65 396 25 351 352 223 38.0 5e-58 MVLNEEQGIKELRDKRIAYSISQGKLAVASGITREYLNKIESGKMKPSKELLNTLHKELA RFNPEAPLTMLFDYVKIRFPTLDIQHIIKDILKLNINYMLHEDYGHYSYTEHYSLGDIFI YTSADEEKGVLLELKGRGCRQFESYLLAQQRSWYDFLMDALVDGGVMKRIDLAVNDHTGI LDIPELAEKCRKREYIGKSRSYKYYQSGELIKHREDEKEYMGHTLYLGSLKSDVYFCIYE KDYEQYVKLGTPLDEADIINRFEIRLRNERAYYAVRDLLTYYDAEQTAFSIINQYVRFVD EEPDKRKNDWKLNDRWAWFIGDNRQSLKLTTKPEPYTLDRTLRWVQRQVAPTLKMLKKID KGNGTDYMEMIEQQAKLTEKHEMIIKQQTTPAKDLVES >gi|312955869|gb|AENW01000033.1| GENE 23 20390 - 21784 703 464 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 6 464 12 467 480 418 46.0 1e-116 MNLLNYKGKRIRASDKGLVYRFCAGTLLFLFIAVLLLLNMGQLMRTDWEHFSLLDNGLTL SPYNFITILIATGVCALVAFLYYHFCYDSFKKLMHRQKLARMVLENKWYEADTVQNDGFF TDLQSRSREKIVWFPKIYYQMEKGLLHIRCEITLGKYQDQLLRLEDKLESGLYCELTDKT LHDGYIEYTLLYDMIANRITIDEVRAENGCLRLMKNLVWEYDALPHALIAGGTGGGKTYF LLTLIEALLRTDAILYVLDPKNADLADLGTVMENVYHTKEEMIDCVNSFYEGMVQRSEEM KHHPNYKTGENYAYLGLPPCFLIFDEYVAFFEMLGVKESTSLLSQLKKIVMLGRQAGYFL IVACQRPDAKYFSDGIRDNFNFRVGLGRISELGYGMLFGSDVKKQFFQKRIKGRGYCDVG TSVISEFYTPLVPKGHDFLQTIGSLSQARQDGTATCEAKGDGTD >gi|312955869|gb|AENW01000033.1| GENE 24 21802 - 22185 382 127 aa, chain - ## HITS:1 COG:no KEGG:CD3390 NR:ns ## KEGG: CD3390 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 127 1 127 127 244 98.0 6e-64 MRLSNGFVIDKEKTFGELKFTAVRDVFLQNEDGTPSTQLKKRIYDLKCSLHGGIIPVSVP PEVPLREFPYNAVVELVNPVADTVSRKTYTGAEVDWYVKAEDIVLKNKNNQNAGNPQNHI PQGQPKK >gi|312955869|gb|AENW01000033.1| GENE 25 22201 - 22530 272 109 aa, chain - ## HITS:1 COG:no KEGG:CD3391 NR:ns ## KEGG: CD3391 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 109 1 108 108 180 88.0 2e-44 MEMKYVVPDMAQSFGTLEFAGESEPIFERDKNNRRVLARRSYNLYSDVQKGENVVVEIPM QAGEKHFKYEQKVKLSQSEVSNGRGYAIGDMGHTDYVLLADDIVTVEEK >gi|312955869|gb|AENW01000033.1| GENE 26 22552 - 22755 72 67 aa, chain - ## HITS:1 COG:no KEGG:CD0385A NR:ns ## KEGG: CD0385A # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 2 60 1 59 61 102 91.0 3e-21 MMMKEKSRSPPKLSNGRLPLILACLLLTCKNTDSQGCVSIYFTLYYLWDCWYFLNRQNKK SQSIYQK >gi|312955869|gb|AENW01000033.1| GENE 27 22768 - 25827 1498 1019 aa, chain - ## HITS:1 COG:no KEGG:CD3392 NR:ns ## KEGG: CD3392 # Name: not_defined # Def: putative collagen-binding surface protein # Organism: C.difficile # Pathway: not_defined # 1 1019 1 1014 1014 1699 87.0 0 MKKILKRLCTGVLALATVVTTLPSTPVHAESKQYWTQSNERVGIVEKVMNDGSIGSTFNE GHLTVEGEDAYCIDINTDFKNGYKTRADASSRMTADQISDVALSIEYVKQYTDSHSGISN NHAYLLRQLVVWQRLSVHLGWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKDRYECDG YIYSGEGQELGQFWANLNVGNATLKKSSSNASITENNTNYSIAGATYGVFSDKDCNEQLA TLTTDSNGNTEIVEVKAGTVYIKELSAPKGYKVDDTVYSLKVEVGKTATLNVSDTPKVTD TLIELFKIDMETQKDNPQGNASLAGAEFTWKYYDGYYNKNNLPEKATRTWTTKTIAEKNS DGTIHYVTKLADAYKVSGDSFYMQDGKAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSE QIKGLYVTQITEDGNLAVLTGSNQFSVSDKVIRGGVKIQKRDLETGDTKPQGSATLKDTA FDIISLNDNAVLVEGKLYKKNEVVKTIHTDIEGIASTSADLLPYGNFRIVESEAPDGYLT DGAKAIDFAITENGKIVDLTDKAHSIYNQVKRGDIEGVKIGAGTHKRLADVPFRITSKTT GESHVVVTDKNGQFSTSADWASHKHNTNAGKTGEDGVWFGTSEPDDSKGALPYDTYIIEE LKCESNKGFELIPPFEIVVSRNNLVIDLGTLTDEYEKEISIHTTATSKDGEKTILAGKEI TIIDTVKLDGLKKGTKYQLKGWQMLKEENAELLINGKRVENDYTFVADDEAMNVEITYTF NASELGGKNLVTFEELYDLSNPDEPVKVAEHKDIDDNGQTVLITERIIKIHTTATDKDGN KEIEAGKDVTIVDTVTLEGLEIGTKYQLKGWQMLKEENAELLINGKRVENDYSFIADKES MKVEIAFTFDASSLGGKQLVTFEELYDLSNPDEPKKVTEHKDIEDDGQTVTIKEVPETPE EPKEPEKPETPQTPDTPKKTDSPKTGDSTNLYGLLALLLTSGAGLAGTYLYKRRKVKKS >gi|312955869|gb|AENW01000033.1| GENE 28 26048 - 26269 109 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKKTSPCILSVEAAGELLGLDAQTVRICIRAGHFGDFARAIKSKPTNECYLYIISFLKL SSKSIDFTAHLRI >gi|312955869|gb|AENW01000033.1| GENE 29 26295 - 26537 152 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQEKRSPLECPFLDYKGIMYVLGDVCKKSQAYKIIHDLLNEKDANGDLLIDPKRMPNIGK LIVPTDIFCKRFGIDRDRYK >gi|312955869|gb|AENW01000033.1| GENE 30 27008 - 27511 119 167 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|283768518|ref|ZP_06341430.1| ## NR: gi|283768518|ref|ZP_06341430.1| hypothetical protein HMPREF9013_0989 [Bulleidia extructa W1219] # 4 164 8 174 175 97 35.0 2e-19 MKKIFISMLLILSATPIFNVKADTNSTESCGIDQSVVEEKYKNQDNELVEKYEDNVEVIY KSDNSIVIRDYANQFNAETPKFRSGGLLKKIAYFIITAAGHCGGVQYLTNNKVDVCRIAL RALGTTKKPNAKYLLTGKYISGRIPGCEPIHSGPCNRGYWEYRVVKL >gi|312955869|gb|AENW01000033.1| GENE 31 27789 - 28169 193 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402332|ref|ZP_06646469.1| ## NR: gi|293402332|ref|ZP_06646469.1| hypothetical protein HMPREF0863_02610 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 124 4 124 132 64 32.0 2e-09 MTGTLTIETMEANGAPVNQAAIRVYERTDSASKFIMGCYTDEKGLSEPITLPTPDSTHSL HSIPQACPYAQYDVQVIKDDFDKEIINGVQIFPNTNSTLTVIMQCCNGRTPKTNTIDIEH HELYDK >gi|312955869|gb|AENW01000033.1| GENE 32 29201 - 29767 220 188 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYIIIISLIIIIVPPIFIILSNLDYRKTIISECSQVYGIELNTISVKYTILEDRVAKYP MMNKEIKRLIKLEKDKYVDINKLVVGKFKISDLVPLCKSIQLFNEIEECKDKGVIDLFDD VREMNHKIATVRSPLKCKINGMKSKIQFFIILIIVKLFNKFKDFTRQDIEQVEKDNDFTV DSNLGLLN >gi|312955869|gb|AENW01000033.1| GENE 33 29779 - 30042 90 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDWTGLNQINTILGIINGVVGIINIGTAFWGWLNHKNKKQFMEKLEKERISAQKENARVC RTCKSNFKARITSLEQTNNKLLEKVSG >gi|312955869|gb|AENW01000033.1| GENE 34 30154 - 31074 508 306 aa, chain - ## HITS:1 COG:SPy0031 KEGG:ns NR:ns ## COG: SPy0031 COG3942 # Protein_GI_number: 15674273 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 183 300 255 368 374 60 32.0 4e-09 MKILLIAGHGAGDPGASGCGYREANLTRELVNLIAPKLRKYAIVDVYNENRSAFYDVQNG TFKIGKYDYVLEVHFNAFNGSGHGTEIFVTDSEQYTDVEQAIMNKLGKHFVKRGGSGVKV TNWLVIYTCKCLGISSALLETCFIDNKADMAEYQAHKESVAQGIVDGIAEGFQLKANSAE QKPGNKPAAQNKPSKPSKPAQPDQILHKGEYFVIPGVHSVDQVLANMDSIWCEEMTGNGG NSIQAGPLTKCDKNGKKTKSQVFSVGDYWKCDKKFKVLAVDKPTNSVQANVGGRKIWLYA GPLREV >gi|312955869|gb|AENW01000033.1| GENE 35 31071 - 31529 519 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399981|ref|ZP_06644127.1| ## NR: gi|293399981|ref|ZP_06644127.1| putative holin [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 150 4 153 153 208 73.0 8e-53 MTQTLTDNYNAFVGAVIAVLSMVFGEHWYLFALFLLLNIADWVTGWMKSRIMKKENSVKG WQGVLKKIGYWIMITFAFMIAAGLIEIGEIISVDLQITTLLGWFVLASLIVNEARSICEN FVEAGFNVPKILSNGLAVADKLINKESEDEEK >gi|312955869|gb|AENW01000033.1| GENE 36 31595 - 31720 90 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENFLVYRILDGKLDFADVPKALEAGVKKILVEIGHEELTK >gi|312955869|gb|AENW01000033.1| GENE 37 31720 - 32151 257 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEFIKLKNGSRYQLITDGFNVGDNHVKLAFIADRSLKEIHSEFSKKENVETLCVENATGE TLTVCDGYVVLDSYVSLDLHYEVSPVEYGGDGEVVKAADYGEVAFLSLYKETAESMLEEL KLKQEVTAQAVQDLILMAAGGKA >gi|312955869|gb|AENW01000033.1| GENE 38 32170 - 32796 336 208 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPFYTIRPRAGTKAQWEQSNMVLKEREIGYEIPNEGVGKGTVKMKMGDGVTPWNSLPYAI PVALTPSDIVTTDSTSNAKVPSAGYCKKKFDDIKTELNRNTVQLTNSAYLPMANMYRSGQ VVYLRCAGYMQKELAANGETTIATPSMIPEAFRPTVDLNFYEIVGSTKIIAKINIKQDGT ILFSPLEKIVKDVGVNIHLTYITGKSTI >gi|312955869|gb|AENW01000033.1| GENE 39 32814 - 33275 250 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPIVCPLQEKDDGTYILLPDGVFENEGDVYLSLAAIDENKIVITSNRLALQVDVSNKIKA AVSPPEEYWQREVLSAMKSWYTSNVDPYFEKSKEKLDDLIDQTNESQKDVKNAVAQCYDA ISALQLETFDMDGGDPFTQASEEDIDVNGGYPI >gi|312955869|gb|AENW01000033.1| GENE 40 33467 - 34966 265 499 aa, chain - ## HITS:1 COG:no KEGG:CA_C1879 NR:ns ## KEGG: CA_C1879 # Name: not_defined # Def: hypothetical protein # Organism: C.acetobutylicum # Pathway: not_defined # 91 377 123 413 1403 95 25.0 4e-18 FDVPPDSELFTYLKTEAEVRTEDNLYLIKGVNKLITQATITCELDMDDWKASYYLKTADI AALQTKNIGDVLNYIKPSGWTVTGEEVRTIRRTPDKEKCNGYDVLMRCKVVYDVQYDFDC LSKVVTVIDPYASIDTGLYVTPELNMKDHTYKESSTGLVTRLYCYGADDLTFSDINDGKP YIDLQGYKGKPIVTSWIDGRYTNKESLLADGRKKLQELAAPVGSYTINMIDLAAVDDKYK DLKVKIRETAHCIIDPVRGIDVPHRIVKIRKYLLDEERSNNTITLSNEPRKITDMINQMQ ENVTELTQDGYKKETTIRNNSESIELIAKGLGEAQLKLQEDQIVALISKPINNGNSMQTM QVIIDILGLTIKNGGIKVYDGNNSLVLYVDQNTKKLNFSGTISGTTITGTLFDGGTIRTN DGDIGGWSINSNGLYNGTVKIKNSGITNIYTWADLYIIRLIIMGTVDADDDMVYHYDFNG DGKITPADYAMLKNRLKAM Prediction of potential genes in microbial genomes Time: Sat May 14 02:22:25 2011 Seq name: gi|312955860|gb|AENW01000034.1| Clostridium sp. HGF2 contig00025, whole genome shotgun sequence Length of sequence - 8203 bp Number of predicted genes - 12, with homology - 3 Number of transcription units - 5, operones - 2 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 234 - 1784 491 ## CLL_0045 replication protein 2 1 Op 2 . - CDS 1794 - 2015 149 ## - Prom 2052 - 2111 4.9 3 2 Op 1 . - CDS 2261 - 3073 496 ## 4 2 Op 2 . - CDS 3088 - 3873 306 ## COG1192 ATPases involved in chromosome partitioning 5 2 Op 3 . - CDS 3863 - 4303 116 ## 6 2 Op 4 . - CDS 4355 - 4909 250 ## 7 2 Op 5 . - CDS 4940 - 6034 357 ## 8 2 Op 6 . - CDS 6024 - 6251 120 ## 9 2 Op 7 . - CDS 6275 - 6616 252 ## - Prom 6724 - 6783 6.7 - TRNA 6758 - 6833 90.0 # Phe GAA 0 0 - TRNA 6954 - 7044 73.8 # Ser TGA 0 0 - TRNA 7063 - 7139 93.7 # Met CAT 0 0 - TRNA 7152 - 7228 87.8 # Met CAT 0 0 - Term 7052 - 7098 4.0 10 3 Tu 1 . - CDS 7219 - 7419 66 ## - Prom 7449 - 7508 7.2 - TRNA 7247 - 7323 90.3 # Pro TGG 0 0 - TRNA 7331 - 7407 81.2 # Arg ACG 0 0 11 4 Tu 1 . - CDS 7592 - 7951 415 ## COG5646 Uncharacterized conserved protein - Prom 8143 - 8202 5.2 12 5 Tu 1 . + CDS 7969 - 8175 195 ## Predicted protein(s) >gi|312955860|gb|AENW01000034.1| GENE 1 234 - 1784 491 516 aa, chain - ## HITS:1 COG:no KEGG:CLL_0045 NR:ns ## KEGG: CLL_0045 # Name: not_defined # Def: replication protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 105 471 57 412 446 96 26.0 2e-18 MNEIDLIKKIHAGADDTCYSAILTTWKEKTRYERLEELMSLLCKGVDMHTAVEQLQITPA GAKALLKNCDNIRMNKEKRCMYDHMLQTSIFLDQCEEMIYAEAEDVYFSLNSFYKPKKAG SNVRHINAMVLDFDYYKDDRFMEWEAERFYRKKIKNKLPFPPTAVLDSGRGLYVIYAFRH CSYHMQDLYRAILNAFYSRFKNLVMDAGAMLLTQVIRLPGSINSRSGRQVKILQYEDTDY RIQDFTVMLPWTQTEVITYRTTKKDKKRDKQVVKEKKDISKRKPYFNDFYADMKTLIVMR NRNGYYIGYREMLLYLVRERAIWSGYTIDESVKLALELNQMMHDPKPKIQIENRCRPSPG RMTSSFDKIIDKLNITLQEQKKLKVLKRRWLKKSAYAKRKRKCKLTNLTEKQQELLERRT RVCELKNVNHLRNKDIADILNVDKSMITRDMQYIKKNPAKFKILLKAYMEMLRDKKDTED YRLRLTYQKQQQLQKWMGYAQTALDYLVRELDVAVT >gi|312955860|gb|AENW01000034.1| GENE 2 1794 - 2015 149 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRNTYFKAKLVVSSDEEALYNTFPVYVVGTLDLFIMAILQGELNTFSVCMLVMATAMAC RAAYKIGLNSTKR >gi|312955860|gb|AENW01000034.1| GENE 3 2261 - 3073 496 270 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKPKIPENFFDDIETTAKKVAEESTLVNCYNDNQKNDERTSAKIVSIYEISFNEMNNMN DTEEEIEIFAESIYQAGGVRSPLNVYPYRGEPGKKYKLLGGDRRLRALLLNSRRYPDAQQ TVTVILEPVPADELEEEEKILELNENRKLDDNQKRKLCERYLHLYRNLEQAGRKPKGQLR DWMAMKMSIGIKKAEALIHDIEGMKRKKSDETLKEREKLNLFREDLRTHIQNVVQTKVKV TSKSVTFSYSGDEDLQRLLDVLGLGEVVNE >gi|312955860|gb|AENW01000034.1| GENE 4 3088 - 3873 306 261 aa, chain - ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 6 256 2 249 253 125 37.0 1e-28 MTNRNGKIIAIALRKGGVGKTTTANEIAFNLGEKKCKVLKVDLDPSSNLSRISNAALADV FSIYDVLKANCPIEGAIQSISEYCDIIVAHDKLTSAEKEFNSYEDIYILLDQLSKVRSSY DFIIIDTPPNLGVLTSMALTAADFVLIPTEATSSGVQGLSQLLEKIQRVQDPRRGTNVNL KIAGILITRLRTNTNFEDAMKSQITKKYLDKDIHVFDTSISNSVVVEESQLYKKSIYEYA PKSKPALDYKNATEELLDIII >gi|312955860|gb|AENW01000034.1| GENE 5 3863 - 4303 116 146 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIFCPYISKKTIENVRNHLDTLTVLMQSGYYQVPLLLPHQITDEIKFNENLSINVHTKY DKVVEELLWSISHLHGKEKEVIYFVHVVGISLSKLRLGYDSRIHISYGRAYEIYKRALIH SAYTNQNFIIYKDVSTENEKRRKNDK >gi|312955860|gb|AENW01000034.1| GENE 6 4355 - 4909 250 184 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLHIDRKRVKQEVHELLVYLGLTLQSNRFQFIVELNDHSKALSATVNYMKSICSQVGVLI NTISLEVNTLDDDVASKMYSSTSIIKFTGNGDDNAYSKKLIDVITVSQNEEWYINRILSY MKYLDIKERHVLYAYYLIGISLKDISVSLDCTIDYVRKLKSKGLIDLAILLPDKLLINDA SEKF >gi|312955860|gb|AENW01000034.1| GENE 7 4940 - 6034 357 364 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNEENNYVYNISVELSESEAKSFFAKAGELNSEPGELIKSFIRDTSSMNLNSQDRGARA IGRWYDEMYSFTRTDTLLSYLFRNNCYETFIEDYDFLLDLKAEIIENPDSLQDPEFMIAY KDSVENYSVYIKDFEHEMISGIHGTPIEITAELKNIRNWRDMNMQSLSKVIKEKENNIEK SLSYKAGYALALINLKDIKEQTKYAFERDKLKAENTSDLTNYAKQGLEYLDKLISSFSID RDIMKMNYNQKMKLVIVKPTDAVEGYKSLVDKVIHQHKEFRKQNSVKMKDLNMRIEADSS LLSSPEVQKELDVHLTHDSNQILFTSRLLNVLQSDYSRFCESVGETVAAKSMENQDEEEM YPDL >gi|312955860|gb|AENW01000034.1| GENE 8 6024 - 6251 120 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFCKQKDNIKQYICLEYSKKRGESICEVELWAANVIKVTDDTGRSRVIVIEEDYSTIHE YEIKFLNKENIYNVQ >gi|312955860|gb|AENW01000034.1| GENE 9 6275 - 6616 252 113 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPRKRFPLMISDYERSQLLSIATTFKISEARAARLAIVLLAKNLENEDFKKVATVLLKEY RVKNGVQQVYPIEVLATFTNLNEQVRKAFETLMSNGLLTKDLDEVKDYVDKSL >gi|312955860|gb|AENW01000034.1| GENE 10 7219 - 7419 66 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNDAPIAQLDRAFDYGSKGCGFDSCWARHLFRDVAQLGSALDLGSRGRRFKSCHPDHCK IVNTAG >gi|312955860|gb|AENW01000034.1| GENE 11 7592 - 7951 415 119 aa, chain - ## HITS:1 COG:lin0899 KEGG:ns NR:ns ## COG: lin0899 COG5646 # Protein_GI_number: 16799972 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 110 4 111 130 78 34.0 4e-15 MVKATYRTIQDYVQGCDEEYRARIQDILSICRELVPDAEEKISWGLPTFLYHGYLVQVGQ CKGYIGFYPGNDAIREFQEELASYKCTKTAIHLPLHEKLPLALIRRILIFCKEYNETHD >gi|312955860|gb|AENW01000034.1| GENE 12 7969 - 8175 195 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTFPYTSISISISISISISISISISISISISSIAQHQKKEPLSCGLNVINLRYLDKCVV YCIENEKR Prediction of potential genes in microbial genomes Time: Sat May 14 02:23:45 2011 Seq name: gi|312955796|gb|AENW01000035.1| Clostridium sp. HGF2 contig00032, whole genome shotgun sequence Length of sequence - 58646 bp Number of predicted genes - 63, with homology - 55 Number of transcription units - 30, operones - 16 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 33 - 800 421 ## CLH_1918 hypothetical protein 2 1 Op 2 . - CDS 892 - 1140 173 ## EUBREC_0955 hypothetical protein - Prom 1161 - 1220 2.4 3 2 Op 1 . - CDS 1227 - 1514 149 ## Lebu_0003 protein of unknown function DUF1703 4 2 Op 2 . - CDS 1561 - 1773 177 ## Lebu_0945 protein of unknown function DUF1703 - Prom 1793 - 1852 6.2 - Term 1807 - 1856 7.8 5 3 Tu 1 . - CDS 1867 - 2574 436 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 2621 - 2680 5.5 - Term 2704 - 2756 6.0 6 4 Op 1 . - CDS 2762 - 4033 1541 ## COG4573 Predicted tagatose 6-phosphate kinase 7 4 Op 2 . - CDS 4079 - 4534 205 ## 8 4 Op 3 7/0.000 - CDS 4540 - 5631 1210 ## COG1299 Phosphotransferase system, fructose-specific IIC component 9 4 Op 4 8/0.000 - CDS 5656 - 5970 537 ## COG1445 Phosphotransferase system fructose-specific component IIB 10 4 Op 5 . - CDS 5984 - 6427 485 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 6585 - 6644 5.7 + Prom 6409 - 6468 5.6 11 5 Op 1 . + CDS 6525 - 6704 56 ## 12 5 Op 2 . + CDS 6701 - 8644 1386 ## COG3711 Transcriptional antiterminator 13 6 Tu 1 . - CDS 8794 - 10041 937 ## Amico_0799 sodium/hydrogen exchanger - Prom 10088 - 10147 8.2 + Prom 10039 - 10098 7.3 14 7 Tu 1 . + CDS 10148 - 11035 805 ## COG0583 Transcriptional regulator 15 8 Op 1 . - CDS 11208 - 11432 127 ## 16 8 Op 2 . - CDS 11439 - 12668 1558 ## COG0112 Glycine/serine hydroxymethyltransferase 17 8 Op 3 . - CDS 12717 - 13091 459 ## EUBREC_1210 hypothetical protein 18 8 Op 4 . - CDS 13108 - 13836 662 ## COG4422 Bacteriophage protein gp37 19 8 Op 5 . - CDS 13848 - 14159 240 ## 20 8 Op 6 . - CDS 14179 - 14619 625 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 14645 - 14704 7.8 - Term 14966 - 15017 5.0 21 9 Op 1 . - CDS 15158 - 15661 347 ## COG0681 Signal peptidase I 22 9 Op 2 . - CDS 15654 - 15833 154 ## - Prom 15854 - 15913 3.3 23 9 Op 3 . - CDS 15919 - 16563 320 ## gi|225377137|ref|ZP_03754358.1| hypothetical protein ROSEINA2194_02783 - Prom 16696 - 16755 4.4 - Term 16695 - 16737 5.0 24 10 Op 1 . - CDS 16792 - 17397 364 ## gi|225377139|ref|ZP_03754360.1| hypothetical protein ROSEINA2194_02785 25 10 Op 2 . - CDS 17399 - 17761 257 ## - Prom 17786 - 17845 7.8 - Term 18001 - 18053 6.1 26 11 Op 1 . - CDS 18089 - 18928 426 ## gi|293402459|ref|ZP_06646595.1| putative DNA polymerase I 27 11 Op 2 . - CDS 18921 - 19628 450 ## gi|293402460|ref|ZP_06646596.1| hypothetical protein HMPREF0863_02737 28 11 Op 3 . - CDS 19652 - 20311 686 ## gi|293402461|ref|ZP_06646597.1| hypothetical protein HMPREF0863_02738 - Prom 20338 - 20397 8.0 - Term 20390 - 20428 2.9 29 12 Op 1 . - CDS 20458 - 20874 207 ## 30 12 Op 2 . - CDS 20881 - 22098 678 ## EUBREC_1848 hypothetical protein 31 12 Op 3 . - CDS 22173 - 23360 1170 ## EUBREC_1848 hypothetical protein - Prom 23472 - 23531 7.2 32 13 Tu 1 . - CDS 23544 - 24158 886 ## COG0009 Putative translation factor (SUA5) - Prom 24203 - 24262 5.3 + Prom 24115 - 24174 3.4 33 14 Tu 1 . + CDS 24374 - 25798 1686 ## COG0531 Amino acid transporters + Term 25806 - 25839 3.1 + Prom 25998 - 26057 4.6 34 15 Op 1 . + CDS 26083 - 27399 1338 ## COG1362 Aspartyl aminopeptidase 35 15 Op 2 . + CDS 27406 - 28062 610 ## gi|293400225|ref|ZP_06644371.1| putative sodium-dependent transporter + Term 28134 - 28194 3.2 - Term 28062 - 28108 8.1 36 16 Tu 1 . - CDS 28292 - 29278 891 ## OTT_1556 hypothetical protein - Prom 29407 - 29466 2.9 + Prom 29366 - 29425 9.1 37 17 Op 1 . + CDS 29649 - 30266 582 ## SGO_0740 putative lipoprotein + Prom 30321 - 30380 6.9 38 17 Op 2 . + CDS 30483 - 30899 454 ## CKR_3111 hypothetical protein + Term 30925 - 30954 1.4 - Term 30908 - 30948 4.2 39 18 Op 1 . - CDS 30978 - 31340 403 ## COG2832 Uncharacterized protein conserved in bacteria 40 18 Op 2 . - CDS 31337 - 31657 123 ## VFMJ11_A1052 hypothetical protein 41 18 Op 3 8/0.000 - CDS 31657 - 33312 212 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 42 18 Op 4 . - CDS 33305 - 35044 204 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 35141 - 35200 8.6 + Prom 35126 - 35185 7.4 43 19 Tu 1 . + CDS 35205 - 36833 905 ## COG2199 FOG: GGDEF domain - Term 37063 - 37114 7.5 44 20 Op 1 1/0.000 - CDS 37281 - 37529 286 ## COG0269 3-hexulose-6-phosphate synthase and related proteins - Prom 37569 - 37628 1.9 - Term 37588 - 37627 5.3 45 20 Op 2 . - CDS 37636 - 38400 776 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 38420 - 38479 7.4 - Term 38815 - 38857 -0.4 46 21 Op 1 . - CDS 38870 - 39784 470 ## COG0679 Predicted permeases 47 21 Op 2 . - CDS 39787 - 40188 278 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 48 21 Op 3 . - CDS 40185 - 41414 507 ## JDM1_2587 hypothetical protein 49 21 Op 4 13/0.000 - CDS 41418 - 42224 621 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 50 21 Op 5 13/0.000 - CDS 42211 - 42984 792 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 51 21 Op 6 . - CDS 43022 - 43495 595 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 52 21 Op 7 . - CDS 43512 - 46202 2183 ## COG3933 Transcriptional antiterminator - Prom 46256 - 46315 7.5 - Term 46731 - 46761 2.0 53 22 Tu 1 . - CDS 46779 - 47375 529 ## Cbei_2704 RDD domain-containing protein 54 23 Tu 1 . + CDS 47760 - 48719 914 ## LA_1827 hypothetical protein + Term 48742 - 48790 11.0 + Prom 48818 - 48877 10.2 55 24 Tu 1 . + CDS 48908 - 49675 969 ## COG0730 Predicted permeases 56 25 Op 1 . - CDS 49827 - 50816 921 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 57 25 Op 2 . - CDS 50803 - 51267 519 ## CDR20291_1592 hypothetical protein - Prom 51374 - 51433 5.0 + Prom 51321 - 51380 7.2 58 26 Op 1 . + CDS 51406 - 52350 770 ## COG0679 Predicted permeases 59 26 Op 2 . + CDS 52362 - 53489 783 ## CCV52592_0185 isoaspartyl dipeptidase (EC:3.4.19.5) - Term 53666 - 53705 -0.8 60 27 Tu 1 . - CDS 53934 - 55031 1360 ## COG0192 S-adenosylmethionine synthetase - Prom 55207 - 55266 6.4 - Term 55194 - 55237 2.1 61 28 Tu 1 . - CDS 55275 - 55472 194 ## - Prom 55550 - 55609 9.9 + Prom 55876 - 55935 6.5 62 29 Tu 1 . + CDS 55955 - 57421 1081 ## COG0733 Na+-dependent transporters of the SNF family + Term 57454 - 57505 9.4 - Term 57448 - 57484 4.2 63 30 Tu 1 . - CDS 57524 - 58279 628 ## COG0561 Predicted hydrolases of the HAD superfamily Predicted protein(s) >gi|312955796|gb|AENW01000035.1| GENE 1 33 - 800 421 255 aa, chain - ## HITS:1 COG:no KEGG:CLH_1918 NR:ns ## KEGG: CLH_1918 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 14 252 309 554 558 154 40.0 3e-36 MYIEKLNKTHLHEPESFWANTSGNDIIYRYIKEANPKMREEFDILVSGGVIEKPIKDTIT YREMDQINNVYSFLLFTGYLKAIKCVDNEKRMYRLSIPNKEIKQIYVSIFSEWFNEQVEH NGTSFVEALRKEQIRNATEILNNVLFQSISYFDYDEKFYHGLLLGMLNDYIVASNKEYGL GRADIAILPRSIMDRGLILELKIATSMAEVRSMAQKACEQIRQKKYMEGLLANGYEDVIG YGIAFYKKSCVITKV >gi|312955796|gb|AENW01000035.1| GENE 2 892 - 1140 173 82 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0955 NR:ns ## KEGG: EUBREC_0955 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 82 207 281 564 81 48.0 7e-15 MFSAALKTNDAVEKGILTGCLRIARESTPLAGFSLFTGLNNFKVITIFDDTSNQQFGFTQ KEMDSLLSDYQAEAYRDKVKEW >gi|312955796|gb|AENW01000035.1| GENE 3 1227 - 1514 149 95 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0003 NR:ns ## KEGG: Lebu_0003 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 1 95 84 176 545 64 40.0 1e-09 MQYQNQYPVIFMSLKDLKDLSFQDQLNNFQIILSEIISRNEELLISEHLDEMDRDLLKRY KAGTVNKARLQNGLRFLSNCLEKHWKKKVVLLIDE >gi|312955796|gb|AENW01000035.1| GENE 4 1561 - 1773 177 70 aa, chain - ## HITS:1 COG:no KEGG:Lebu_0945 NR:ns ## KEGG: Lebu_0945 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 52 4 56 552 71 66.0 8e-12 MKQIPIGIENFKELIDKDYYYVDKTLFISDVLKEKVALCTRPRRFSKTLNMSRPCPPRRV ILFLFHSPSG >gi|312955796|gb|AENW01000035.1| GENE 5 1867 - 2574 436 235 aa, chain - ## HITS:1 COG:lin0639 KEGG:ns NR:ns ## COG: lin0639 COG1011 # Protein_GI_number: 16799714 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Listeria innocua # 7 223 3 230 234 152 38.0 7e-37 MSEGLKHICFDLDDTLYEQIAPFRQALLTIQSVSNEQIRRIYKSFRIRSNELFFRHQNKE ISFEAMQIGRIQLALKDHDILIMDEEALKFQAAYQRGQYEISLSDTLVEILDYLKSRYVR ISLITNGPYEHQLKKIRSLGLGKWIEEKDMIISSAVGISKPDERIFHMVCESGLYVGDSY ENDVIGAKKAGWDVIWLNKYGQQEADQKADFTVRDERELQSLLLNFFDFDGSCMC >gi|312955796|gb|AENW01000035.1| GENE 6 2762 - 4033 1541 423 aa, chain - ## HITS:1 COG:YPO0832 KEGG:ns NR:ns ## COG: YPO0832 COG4573 # Protein_GI_number: 16121140 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Yersinia pestis # 10 348 4 347 432 61 25.0 3e-09 MNKLPIKKVVEGLLKLQDTGESATLLGIGPMSPNLLQASFEIARDYDFPLMFIASRNQVD ADELGGGYVNGWNQKRFQDDIRAVAEQVGFDGLYYLCRDHGGPWQRDNERNAHLSEEEAM RLARQSYLADIENGFDLLMIDPTKDPFEIGKVIPLDVVLQRTVELIAYCEEERKRRNLPE IGYEVGTEETNGGLTSTEKYREFIEKLEKELKVKGLPMPTFIVGQTGTLTRKTEQVGTYN FHNAYDLAAMAKAYGVGLKEHNADYLDDVTLLEHIPANVTASNVAPQYGTEETRAYLKLC EVEDILKKEGLLEKTSSLRKTLLVKAIKTERWRKWMIGEQRNLQVADILKDEQLSLDVLD IAGHYAFNDADVKKELRILYENLAKHHIDGQRFVVDHIKRPLQQYAECYHLKGVTSRVRR IIE >gi|312955796|gb|AENW01000035.1| GENE 7 4079 - 4534 205 151 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQIVVLGTDLDTAMAYGVQHGASQMYFTFIGDENAEENIMRNEDRSKQLEKAGLRFKCI RSKQEPQDCYALVHADEVLLGIFKEQQDSYRDYLKAVLPMRAKTNAGQPLSIRYKKKYKA KVLYFMNELYQAMQEEEAEWFHQMVNMQELV >gi|312955796|gb|AENW01000035.1| GENE 8 4540 - 5631 1210 363 aa, chain - ## HITS:1 COG:BS_yjdD_2 KEGG:ns NR:ns ## COG: BS_yjdD_2 COG1299 # Protein_GI_number: 16078266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Bacillus subtilis # 16 342 15 346 367 218 43.0 1e-56 MFKNLGKDLVKAFNTGVSYFLPAVVIGGVFLAFALATGEAGSDGMKVTNGFMQNINTIGS AGMAMMIPMLAGYIAYSLAGKPALAPGMIVGYIANNPVGENNVSTGFLGAMIMGILVGYV CKWIKSWKVGPTIKSIMPVLIIPIVSALICCLAYLYILVGPLGALMKALTGMLSGMQGGS AILLGIVIGVMTAFDMGGPINKTASAFTMALMAEGLYGPNGAFRVAVAIPPLGLALSTFI SRRKYDNAEKQLGVTSAFMGLIGITEGAIPFAVKDIKHVLPAIMGGSAVGAGLAMMHAIE CYVPHGGMIVVAATNKPLLYTLDMAIGVVVTALLLMLLKPNLENKDKKTEKLSVTEDNKA SVK >gi|312955796|gb|AENW01000035.1| GENE 9 5656 - 5970 537 104 aa, chain - ## HITS:1 COG:SP1618 KEGG:ns NR:ns ## COG: SP1618 COG1445 # Protein_GI_number: 15901455 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 101 6 102 108 83 53.0 1e-16 MKIVAVAACTIGIAHTYMAQEAIEQECKKRGYECKVETQGGMGIENELDEDEIAAADAVI LAIAIGIEGEERFEEKEEEGKIIKIDPSVVIRDPAEIIDQAEKL >gi|312955796|gb|AENW01000035.1| GENE 10 5984 - 6427 485 147 aa, chain - ## HITS:1 COG:hrsA_1 KEGG:ns NR:ns ## COG: hrsA_1 COG1762 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 11 136 35 164 183 78 31.0 4e-15 MFEPEIVKVSSTRFETKEEIITYLSQKAGHAKKIKNVKSYVDAVLDRESTASTAVGFGIA IPHGESDAVTETFVACLHLLHPVQWDHDEVDLVFMIGVPLSSRNKEHLRILAMLSRHLMK EAFRKELRKIRTDQEFYECIKFLEHEN >gi|312955796|gb|AENW01000035.1| GENE 11 6525 - 6704 56 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFAVLFPAFNLKHLSMALYIDVYFIFYYKQKQVAISFSSKSFYYVNGKFYHDKAGGEIK >gi|312955796|gb|AENW01000035.1| GENE 12 6701 - 8644 1386 647 aa, chain + ## HITS:1 COG:lin0445_1 KEGG:ns NR:ns ## COG: lin0445_1 COG3711 # Protein_GI_number: 16799522 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 13 504 12 506 508 129 24.0 2e-29 MKTSALSKFLNLLLEESDYRKTSYFAEKLMVSNKTISNYITELRYHMKEYELDITAKHGV GIRMEGDQSAVKLLQKSIQRTAGDSLTSECRRKKIMEKLLMLDESISVRRLSDEFCISST SIVKDLEKVEQELLQQDILLLRTKAGTRIEAKEQRIRSAKRKFIFEEIMSLTQQDQIMDL TLCTKILSRYVADELQIIARSMIEIAQDKLGFRMDTNYYAQIFISYSIFIQRIKKGHEIT EAPARPVVTELHVLKTYPITEEIIQWLKEVHHIRVNDLDIRWVNARLSGVYHEDRKETAD YSPIILDTVTELISSIGDIFNADFISDELLKNGLSKHFIPMIARLKNNIKITHPFIMQIK QQYTAMFSVVSLASSILEKKLGFTLSDDEIGFILIHFQAALERHNLSKKIAVVYNCGLAS AMLIENQIKINLPTFDVIELINIHDLKKEYLRHFDFIIATMELDMKDIPSVVISPVADFG DIQRIKQTYEKLIRNVKESRFPYLIQAISADTILVHEKCKTKEDILKKANEILLKKGYVE EEFFDSVKNREKISSTEIGNGIAIPHGSDKYVKQTSIVLITLEDAILWRDDMVSVILFTA VSFEQKDTMRRLLKDLYHLISSENFIEKIQKAASIEEILGIFYGRGL >gi|312955796|gb|AENW01000035.1| GENE 13 8794 - 10041 937 415 aa, chain - ## HITS:1 COG:no KEGG:Amico_0799 NR:ns ## KEGG: Amico_0799 # Name: not_defined # Def: sodium/hydrogen exchanger # Organism: A.colombiense # Pathway: not_defined # 14 398 3 389 391 238 41.0 3e-61 MIADFLKQQGNAGIILSIAIILLAGFLCTRVTKRLHFPNVSGYIISGILIGPCVLQMIPE EVVAGMDFMTDIALAFIAFGVGKYFKRDILKKQGSKILTITIFEALTAGACITIAMVTLF RLPWSFSLLLGAIGCATAPASTIMTIRQYHAKGNFVDTILQVTALDDAVALIAFSICTAL VEFMHADQALQWSLILLPVVWNLLAVILAVVLAWILHRIISEKRSSDHRLVLVIAVILTL TGLCSCFDISPLLSCMVLGAVYINLSGNKDLFRQVNSFTPPITLLFFVLSGMRLNLYAPI SCGLIGVVYFFVRIIGKACGAWAGAWLSHASTSVRHYLGLALIPQAGVSIGLAILGQRLL PTAEGTMLSLIILSSAVLYEMIGPACAKLSLKLSGSIESDDPSVNAKLVDRAKTI >gi|312955796|gb|AENW01000035.1| GENE 14 10148 - 11035 805 295 aa, chain + ## HITS:1 COG:BS_ywfK KEGG:ns NR:ns ## COG: BS_ywfK COG0583 # Protein_GI_number: 16080817 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 8 274 8 272 299 127 28.0 3e-29 MLDTKIVSLLTLIDCGSYTKAARQLHLTQPAISHQIKQLEEEFQIKIFHRSKKSLILTPE GEILVKYAHRMTAVYNNTHQALEDARNHLHRFNIATTPTAGEYYIPQLLAAYCREHSDVH INLITDSINNIYNKLKLYEADFAIIDGRLTSDKYHSILLDTDYLCLIVSPQHPLANRSSV SMNELLEESFILRSKEAGTREIFESYLESQRDSIRNYRILIETDSLATIKELVMSNMGVS IMSHNACREDEQKGRLKTIPITNSTMIREINLVYPKDFQHVDVLLELKKTYSKLH >gi|312955796|gb|AENW01000035.1| GENE 15 11208 - 11432 127 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQWERTSVCSHFNRDKTSAWEFASTRISIVNLQIAHNRVGYVHKEESIRILYVIRRCVEK RMKKEFSIAQKKLN >gi|312955796|gb|AENW01000035.1| GENE 16 11439 - 12668 1558 409 aa, chain - ## HITS:1 COG:BS_glyA KEGG:ns NR:ns ## COG: BS_glyA COG0112 # Protein_GI_number: 16080743 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Bacillus subtilis # 3 408 8 412 415 555 66.0 1e-158 MNDKKIQEAIKREAERQLYNIELIASENYVSRDVLEAAGSILTNKYAEGYPSKRYYGGCV HVDEIEEIARERAKQLFNAEHANVQPHSGSQANMGVYLSVLQPGDTVLGMNLTAGGHLTH GHPLNFSGTLYRFVDYGVTKDSETIDYEEVRRVALKEQPKLIVAGASAYPRVIDFAKFRE IADEVGAYFMVDMAHIAGLVAAGEHPSPVPYADFVTTTTHKTLRGPRGGLILCKKEHAAL LDKKVFPGMQGGPLMHIIAAKAVCMQEAMQPEFKEYAKQIIANCAVMSNTLKEEGFRIVS GGTDNHLILVDVKSSLNMSGKLAEKLLDEAGITCNKNTIPFETEKPFVTSGIRLGTAAMT TRGFKENEFRQVALWISRVLKNAEDEAVREEVRKEVRALTVQFSLPNER >gi|312955796|gb|AENW01000035.1| GENE 17 12717 - 13091 459 124 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1210 NR:ns ## KEGG: EUBREC_1210 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 15 122 17 124 202 72 37.0 4e-12 MHKINTRLVKMMKAVELVIAVLLMIAIAISTLATVCFGAESLMNQSFQLDAILEKALTLV VGVEFVKMLILHTPESVIEVLLYAVARQIIISHESAMENLVGVLAVALIFVVKKYFLMNA EQKK >gi|312955796|gb|AENW01000035.1| GENE 18 13108 - 13836 662 242 aa, chain - ## HITS:1 COG:MT2803.2 KEGG:ns NR:ns ## COG: MT2803.2 COG4422 # Protein_GI_number: 15842273 # Func_class: S Function unknown # Function: Bacteriophage protein gp37 # Organism: Mycobacterium tuberculosis CDC1551 # 2 209 12 224 284 81 28.0 1e-15 MANWNPWHGCHKISAGCEHCYVYRMDERHGKETGVVTRLKDFDKVLHKNRKGEYKIASDE IVYTCFTSDFFVEEADVWRDEAWNIMRQRRDLFFFMITKRIDRLMKCIPYDWGTGWDHVG IACTVETMERAAYRLPIYQAAPLRHKYVVCEPLLEPLNLRPWLDDSIEELIVGGESGPQA RVCRYEWILDLRKQCEEKGISFWFKQTGANFVKDNIHYRIPRRQQHLQAKKADINLNPEI IL >gi|312955796|gb|AENW01000035.1| GENE 19 13848 - 14159 240 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLSLAVLYVYGYRLKQRQAACPFYKVWHGDEEIIQIRLSGVVSIQKGQRKVFGYISSCD EMEQDIWKFHVRLRRHGGILCFRYAAQSLQQLSADGSVLHTYR >gi|312955796|gb|AENW01000035.1| GENE 20 14179 - 14619 625 146 aa, chain - ## HITS:1 COG:BH3767 KEGG:ns NR:ns ## COG: BH3767 COG0698 # Protein_GI_number: 15616329 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Bacillus halodurans # 1 145 1 144 145 164 57.0 5e-41 MKIAVACDHGAFEYKEIVKEMLTEMGHEVEDFGCHGCESVDYPDYAGPAAQSVADGKNDK GIVICGTGIGVSIAANKIKGIRCALCSDPVSAKLTREHNNSNVLAMGQRIIGVELMKEIV RVWVNTEFSHDERHQRRIDKVMALEK >gi|312955796|gb|AENW01000035.1| GENE 21 15158 - 15661 347 167 aa, chain - ## HITS:1 COG:BH2130 KEGG:ns NR:ns ## COG: BH2130 COG0681 # Protein_GI_number: 15614693 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus halodurans # 1 154 5 169 191 77 33.0 1e-14 MINILNRTAYVLLGILLLMIAPFLIPKVIGFIPYAVLTDSMEPAYSVGSLIYVKESAPET IQVGDVITFRLDVKSGQLATHRVVANNTKDKEFITKGDHNDYQDAAGVAYERLIGRVAGS VPVLGYLYSFLVSSTGIALETFIVAMIIILWLLVYTSTRKNHCKQKK >gi|312955796|gb|AENW01000035.1| GENE 22 15654 - 15833 154 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDEKNNCEKATFIVDIKNRENHSWQGTLTWVDTNKEICFRSALELIKIIDSTMPGDEND >gi|312955796|gb|AENW01000035.1| GENE 23 15919 - 16563 320 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225377137|ref|ZP_03754358.1| ## NR: gi|225377137|ref|ZP_03754358.1| hypothetical protein ROSEINA2194_02783 [Roseburia inulinivorans DSM 16841] # 1 204 1 205 209 73 32.0 1e-11 MNRKKIITLCLSIILLALIGVGGTLAYLTSNTEQLNNRFTFSNGISMQLDEDRIDKNLHT VTEENGVIAGSDKGNDYLNVLPGEVLHKDPTVTILANSPDCYVFVSVKNPSEELLSLNIS DEWMFIDKIDDISYYVYVKDGQPESVKASKQNTRLTPVFDSVTVANIINKDNSELVSLSD IEVKASAVQSKVAGEDNYDEVKAEGLGLLGYHVE >gi|312955796|gb|AENW01000035.1| GENE 24 16792 - 17397 364 201 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225377139|ref|ZP_03754360.1| ## NR: gi|225377139|ref|ZP_03754360.1| hypothetical protein ROSEINA2194_02785 [Roseburia inulinivorans DSM 16841] # 1 170 1 184 202 89 36.0 1e-16 MKCFEKIKLKIVLLIVLIIAVVGIGTTYAYLTSSTNNLENTFTVGKIETEIEENPEIQGS NIKKDPSVKNIGSNDCIIRMRVTVSPKVIADYLSQNNGINYKTESWRYNNSDGFWYYLGI VSPGKATDPLFTEVNGLLDADGKIKEEFKNVSDFEITLYQEAVQAVVWDADGNELSAMDS NNKFNHENALKIWSAYKGSLN >gi|312955796|gb|AENW01000035.1| GENE 25 17399 - 17761 257 120 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYYRTIRLHEILNGSAIVKDLPYGEYVVTEMETLRYVCVGDLVQQAVINEENKTAVVKF QNKLVKEELFSHTDVIENRFRIGDDGKVSITQDKLLDNTSDFNLYRISQNVLKAVEKEEQ >gi|312955796|gb|AENW01000035.1| GENE 26 18089 - 18928 426 279 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402459|ref|ZP_06646595.1| ## NR: gi|293402459|ref|ZP_06646595.1| putative DNA polymerase I [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 279 4 268 268 159 38.0 2e-37 MIKNKTLCKILSCCLLMAMVMFPLFSIRVHAAEYEIVFKAGAHGTINGNKEASYRLSSDD VFPDEPDIQVEKGYVFVGWNKQLPSVGSKVTGEMVYVAKYAVVIDGVTYTIRYVDENKVD IATPKTMLGELGSNVTARAKTIPGYTYQTAEQDAVVKDQLEILFVYTLTNPDEVVPYQSN TNNQAGTNNQVGTNDTQGIENNNTLHNGENNNIDNNGEDVNENGSQEEETVLGEGETPQA IAKRNRQMMMYAAGGGAALLAILLFLLFKRRKKEKEASQ >gi|312955796|gb|AENW01000035.1| GENE 27 18921 - 19628 450 235 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402460|ref|ZP_06646596.1| ## NR: gi|293402460|ref|ZP_06646596.1| hypothetical protein HMPREF0863_02737 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 235 2 216 219 158 41.0 2e-37 MKKGFRIITAVLLAVLFSITSLQAAESAAETGLSFEGDSEKFITYEQQSAYENMMPGEKR VQRITLTNNDEEELKFYVRAEYTDPLGEAVADGHVAYNVEFVTNNESFYTGRIGGVTKAN MNSLETNYLLRSIKKGETATIDFILQVDGDSMNDTYQDTEGRLRFIFSVEHMNSAPVEQA ANIVKKIPVINKIPGVNTGDPTTIGLILGFFAASAIGLILLIIIKVRSRRSEQND >gi|312955796|gb|AENW01000035.1| GENE 28 19652 - 20311 686 219 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402461|ref|ZP_06646597.1| ## NR: gi|293402461|ref|ZP_06646597.1| hypothetical protein HMPREF0863_02738 [Erysipelotrichaceae bacterium 5_2_54FAA] # 8 217 1 210 213 166 41.0 1e-39 MMRGYDDMKKIMLVVTTVVLLAIFVYEGSLAFFHAQTDISAKISAGNLGIELVQDMDKEK ITKTENGFQIRSSMSGDEIKDRVYVENKRDHSLYTRVAVTKYWVNKDNEKMVDADASKIK LITEDTSKWIIIDDADNSNSEIVYFYYKLPLEKGGKTTNLVDAIKISHEIKNGEYADYRI HIAYDADAIQSIAGAEAALSEWGVELSVDEEGSITSVVD >gi|312955796|gb|AENW01000035.1| GENE 29 20458 - 20874 207 138 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDHRYYPKNAVRICLHEPQQDDFDGTLFSCIRKKGFSFHNFTSFIILTEEILDFVGKPQ SFQEKRTFNKEKKYLRIENLHIQEDCSYIYEQHGAYATYDIIIMTRRKSDWQGIVKKDEE VIGEFKSILELMHLLVVR >gi|312955796|gb|AENW01000035.1| GENE 30 20881 - 22098 678 405 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1848 NR:ns ## KEGG: EUBREC_1848 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 3 377 11 386 415 190 31.0 9e-47 MEVIKAFLFGNLQINYGDIHLDETDMRSSQLVTLLSYFLIYNDRKISSSELNDMLWEDDE EISNPQSALKNLMYRLRTLLKKVFGKTDMIITGKGSYYWNTSFKIKLDTDKFEDLDKKLK TDREYSYEELTEMFDCLTMYEGKFLASISSKRWVLSLSTYYHSIYLRCAKQLAFRFEGKQ EYEKMNRLCKDALIQDPLDDEMQYLFISSLMYLNHYDLAKEQYHTASKLLYERLGIKQSQ FLQKAYMMLLKNNNEVSSNLDVIQNSIAEEKIEKAFYCEFGVFKEIYHLELRRMVREGFS EYVVLMTLQPKKFVDPHSQEGLHMLSKEMNTLKEILCISLRSGDVISKYSGSQFIFMLHN CNAENAKQVIERIQNKYESANKYSFIDLDYTYDELQLFENDTLKG >gi|312955796|gb|AENW01000035.1| GENE 31 22173 - 23360 1170 395 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1848 NR:ns ## KEGG: EUBREC_1848 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 6 378 11 388 415 125 25.0 2e-27 MRKKNILKIHLLGEFYMENKNYRFPQETKKSTQLILLIAYLMMYRHTVVSKEKLIKILWK EDESDKPEGALRNLVYRARKELQKFYPDNPELSFILSKGNTYAWNSEIPCEIDIVQMDEL CKKIEEEEAPEASYQYCKELLSNYMEDFMFEFHTQDWVELQKTYYDNNLMRATNRSCKLL MDKEYYDEVIKLCDILGFKHYANNHIHEYKLEAYRQTHQYSLAISYYHKVTDMYYGRLGI EVTPLCREIYAEVVQCIASNPVDVDELEQQLKEHVRNEGTFYCDFDVFKNIYQMNLRSAR RSSRSRYLVLLTMRQPEGVKEEAQQRESDILRDVITTELRKNDVFTKCSPFQYSLIIATT SMEGCDRAISRIMDRFEQKKTIVESELAYEYKHIE >gi|312955796|gb|AENW01000035.1| GENE 32 23544 - 24158 886 204 aa, chain - ## HITS:1 COG:lin2685 KEGG:ns NR:ns ## COG: lin2685 COG0009 # Protein_GI_number: 16801746 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Listeria innocua # 12 201 19 211 345 143 43.0 2e-34 METRRFDKKDVKEVAELLKNGQVVAFPTDTVFGLGVIYENEEALRKLKESKGRPENKPIP TMVADVEQMKCIAQMPAEAVALADAFMPGAFTMILKKQETLPDYVTNGFPTVGIRMPDDP FVLRLIKECGKPLLVTSANRSGEETGVRDEQVLEQLDGRIDAIVLGEAKGKLASTIVDMS EEEPRIVREGPISADDIKKVLHNA >gi|312955796|gb|AENW01000035.1| GENE 33 24374 - 25798 1686 474 aa, chain + ## HITS:1 COG:STM0969 KEGG:ns NR:ns ## COG: STM0969 COG0531 # Protein_GI_number: 16764329 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 5 470 7 470 473 429 48.0 1e-120 MESSKKIVWYNLAFMAFSTVWGFGNVLNGFVYFNGIQVIFSWILMFALYFVPYALMVGEL GSAFKDSGGGVSSWINETIGPKFAYYAGWTYWACHITYIASKGSGGLKALSWAVFRNAET YDTFPTVYVQLGTLAVFLFFCWVASRGLNPLKKLATIAGSSMFIMSILYILMMFAAPVIN PNGGFVTPDFSWDNIFPQFNLQYFTSLSILVFAVGGCEKISPYVNKVENPSKGFPKGMIT LAIMVVVCAILGTIAMGMMFDPAVINGTQESFNSYVSNGSYWAFQKLGGYYHMGDALLII YALCNMIGQFSTLVLSIDAPLRMLLDNEEAREFIPSGLLKKNKYGAYINGIWMVVILSGS IILIQSFVPGAASVLAQLNKLNSVTMPMRYLWVFAAYIALRTARNKFQPEYRFVKNQGVA MTFGIWCFILTAACCIMGMYTPGDMFTTALNVITPVVLTALGMILPVIKRNEKA >gi|312955796|gb|AENW01000035.1| GENE 34 26083 - 27399 1338 438 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 4 424 6 432 433 381 45.0 1e-105 MYKDIANELLSFIQKSPSCFHAVNTMKDMLLEDGYTELRECEAWTLEKGGKYFTTRNGSS LIAFHIGSSLEDYHFQVTSSHSDSPTFKVKEEAVLKGKGGYLQLNTEGYGGMLCATWMDR PLSLAGRVLVKEGNTFTSRLVSFDRDLLLIPNVAIHMNRDVNNGMKYNNQIDMLPLFSAG ECNEGDYAQLLADELGCAKEDILGTDLYLVNRMAPSIWGVKEEFISSPKLDDLQCAFTSL KALLHGTNEQAVNVFACFDNEEVGSGTKQGACSTFLYDVLQRINDNLGYTKEDYYRAVAK SFMVSCDNAHAVHPNHPEKTDDTNCTYMNKGIVVKFSANQKYTTDAVSSAVFAGICEKAE VPVQHFANRSDAAGGSTLGNLSSQKVSMHTVDIGLAQLAMHSSYETAGIKDSEYMIRALT TFYNTNLHITDSETIEVA >gi|312955796|gb|AENW01000035.1| GENE 35 27406 - 28062 610 218 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400225|ref|ZP_06644371.1| ## NR: gi|293400225|ref|ZP_06644371.1| putative sodium-dependent transporter [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 218 1 216 216 267 64.0 3e-70 MKNQSSQKKIHIDNLYLMKKLDEDYHKEFMRFYDYVLHSNTSDADINIIVNTALEQCLEG MKNRKKATLVIPRDLKEYTTKLSRGNVYKDMKRKIRNQDYEKMQISSIWYVFSLCIVLFF FKNLMDQKFIVNYLVDVIVACVAGGIAMKNFLIRKRIVKRYQFGSFYMRMDIIAIVACVF IKIVTPAAYANFDITYLLLVISFFIMKRKIKPQFEAVI >gi|312955796|gb|AENW01000035.1| GENE 36 28292 - 29278 891 328 aa, chain - ## HITS:1 COG:no KEGG:OTT_1556 NR:ns ## KEGG: OTT_1556 # Name: not_defined # Def: hypothetical protein # Organism: O.tsutsugamushi_Ikeda # Pathway: not_defined # 10 276 7 282 332 76 30.0 1e-12 MENTKTNTVLDYCNDVFFKYALSREDEGSVYARNTIIERVTGIKVKESTVLNPNLDPGII GKKRIILDVHVKDEKGRFFNLEMQTTYAGVAEMMRFEFYGARALNNQLDCSEKYRDLKPV YQIIFIEKRAWNNKNLINHYRMRNEQGEDESKHPLIRRTYIHLPVINEIAKKKAIQQMDD FEQLCFLFENNAKNDILESKERLVKVFMNKYEEMQKDDELWSTAMAIQMGEARYRYGLED SFEEGMKEGIIRGKAEGKVEGKIEGRIEGKLEGERQLLHRLMEAKFQEDCTAWLQSLTED QLHIVSNLLLECDTLESVKKQLNRRNTI >gi|312955796|gb|AENW01000035.1| GENE 37 29649 - 30266 582 205 aa, chain + ## HITS:1 COG:no KEGG:SGO_0740 NR:ns ## KEGG: SGO_0740 # Name: not_defined # Def: putative lipoprotein # Organism: S.gordonii # Pathway: not_defined # 6 205 68 266 266 112 34.0 1e-23 MESDTENMPEKREQSETDDEHKQNKLPIVQSMQETSYYCVPACIQMALRYHAIESTQQHL AQQLHTDPVTGTEYVDMARVLNSYLFPGTSIPSADEPGYHVQTLSPDDHTQDASDTFSRR CVQNIDDGYPVFAAVDLNALYPALAHANHMVLVIGYEKNKDQITSYYIINPYPPVQDEVH RGLKQFTAEELVRAILVNEEPAYIW >gi|312955796|gb|AENW01000035.1| GENE 38 30483 - 30899 454 138 aa, chain + ## HITS:1 COG:no KEGG:CKR_3111 NR:ns ## KEGG: CKR_3111 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 3 137 26 161 162 79 39.0 5e-14 MNQTSLSFTVFFEDPFWIGLFEYREQQLLYLKRIVFGSEPSEQVVYEWLKGCWYSISFQA PVETVRSKASHRNPKRMQREARKAQDTGLSLTKSQLAVKQQQEERAQRKAERRKANREGQ KEAFRLRQMKKKAKHKGR >gi|312955796|gb|AENW01000035.1| GENE 39 30978 - 31340 403 120 aa, chain - ## HITS:1 COG:PM0679 KEGG:ns NR:ns ## COG: PM0679 COG2832 # Protein_GI_number: 15602544 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 120 1 120 120 80 41.0 9e-16 MKPVYFIIGIVSMLLGAVGVVLPVLPTTPFLLLSAWCFAKSSRRFHCWFISTALYKNHLD SFVQHRSMTWRTKLSLLAVASTMLLFAMYFMSNLWLRLFLLALMLFKYYYFLFRIKTIRE >gi|312955796|gb|AENW01000035.1| GENE 40 31337 - 31657 123 106 aa, chain - ## HITS:1 COG:no KEGG:VFMJ11_A1052 NR:ns ## KEGG: VFMJ11_A1052 # Name: not_defined # Def: hypothetical protein # Organism: V.fischeri_MJ11 # Pathway: not_defined # 5 102 9 106 129 99 46.0 4e-20 MEAAAKREKEKQVIQEMISLYCRKQHHGQSLCKECQTLCRYAHQRIDCCPFMESKTFCSN CSVHCYQKEQREQIRRVMRFSGPRMLLHRPLMVIQHMWLSRKERHT >gi|312955796|gb|AENW01000035.1| GENE 41 31657 - 33312 212 551 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 340 550 5 219 223 86 31 4e-16 MHKTGNIRLMARMSLLVKPLAPHMLLAVFLGVAGFLCAIYIPYFSALLISHIAIQAADFP IGVFFVIMLVLALLRGILHYGEQACNHYIAFKLLAILRDRVFTVLRRLAPARLEGQDKGN LIYLITSDIEALEVFYAHTISPVLIAVVTSGILLIQFAKMHILFFMIALLGYLFCGVLLP LIITKLGTQEGCQSREGFGRLSSYVLESLRGMQDVLQYRIGSQRMEEMQRKSEELHDTAK RLKLHEGTSSILGNAVVTLFTLLMLLGGCLLYLQGTVSFTTVLMSTVLMVSSFGPVLALA SLSNNLLITMASARRVLQLLDEKEEVEEISGKKQAVSGDIKVENLSFSYEKEEVLRNVQA TFKKGKITGIHGKSGSGKSTLLKLIMRFWNVSQGSISVHGVDLKDINTSDLRNMQSLVTQ ETVLFHDTIFNNIRIAKLDASVDEIEEACRKAGIHEFIMSLPKDYATPVAELGDSLSGGE RQRIGLARAFLHDCDCILLDEPTSNLDALNEAVILKSIQAQKDKTILLVSHRPTTMRIAD TVLSVESGRVS >gi|312955796|gb|AENW01000035.1| GENE 42 33305 - 35044 204 579 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 329 554 9 232 312 83 29 3e-15 MIDKRLLKEMPETKPYIMKQVAMQWFSLLCNIVFVALLANVLSHIFYKTVNEQLLLLTTC GVILCIALRAVCVRKASLYSHEASCHVREQLRMRLFKKLLEMKSGYTESAPTSELVQLSV EGIDQLEIYFGRYLPQFFYSMLAPVTLFLILVWMDVKSALVLLLCVPLIPMSIIAVQKFA KKLLSKYWSSYTTLGDSFLENLQGLTTLKIYQADEWKQQEMNREAENFRKITMKVLTMQL NSVSVMDLIAYGGAALGSIVAILGFQNGSLSLFQVICIVLLSSEFFIPLRLLGSFFHIAM NGIAASDKIFRILDKPQKQAEQKQWKAETVDIQLRDLSFSYDEQRTILKHVYMQLKPGQF TAIVGESGSGKSTIARLIAGIIKDYHGQLLIADTQRRDIDDDAFYQSFLYVSHQPFIFKG SVRENLAIAKDSLSEEAMLEALRKVALLDFVMEQGGLDMELQEQGNNLSGGQKQRLSIAR ALLAQRDVYIFDEAASNIDAESEDAIVSVIHKLAETKTVIMITHRLKSIKDCDQIYVIDQ GTCQEHGRHEELLRLRGTYARMYEKQQELEAMEGAEQYA >gi|312955796|gb|AENW01000035.1| GENE 43 35205 - 36833 905 542 aa, chain + ## HITS:1 COG:PA3177 KEGG:ns NR:ns ## COG: PA3177 COG2199 # Protein_GI_number: 15598373 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Pseudomonas aeruginosa # 389 541 145 302 307 84 34.0 4e-16 MTRKKMLLLYICLWIIGLCLVVSVIFPQKTPPAAVIPPKSNDIEVLKNGWKDGAAQAEAK TDIRDKTFSRKRTLPQIAKDTMLVIRNNYRGVQICIDNEVRLDYGYHRDDSTLLGNVYVR MPVTSEDSGKELLLKFKNNYSNVSSDIEYPMLVSASSFAFYILQENAGIIITVILLLLLD IILVFLIIWLKNRSFWLSKTSLYALMSFIFLTALWLLTDSPILQLYVSGSLRIVLLSFCS FMLMPIPLLVFINDALKLRCRSLTLLQLLLLGNTIVQCILYQAGILDFVQMLPFTHLLMM VSIAALLFALIREVRLYKTDYSRNILLAFFILALFSTAALTAFYLHPMSDYNIYFRIGLL LFIVMLSCFSFHKVYLLSQEQEQIQFYRQLAYTDTMTKARNRSAYEQRCQEMEKLKPDAP LTVFMFDINNLKHTNDTYGHHAGDTIIRSAADLLNTVFTDIGQIYRVGGDEFVVLSEKNY MSAQAMFSLLDQRLKEYNQTAELPLSIAKGFSSNTSRNKGIQELLVMADQAMYEDKRKSR NL >gi|312955796|gb|AENW01000035.1| GENE 44 37281 - 37529 286 82 aa, chain - ## HITS:1 COG:SA0528 KEGG:ns NR:ns ## COG: SA0528 COG0269 # Protein_GI_number: 15926248 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Staphylococcus aureus N315 # 1 81 1 81 210 59 40.0 2e-09 MKLQIATDIANTETVFSIADAVHDVIDILEVGTPVITKEGLVPVYHVKLRYPNLCVFADT NIIDGEAMECEDACKAHADIVM >gi|312955796|gb|AENW01000035.1| GENE 45 37636 - 38400 776 254 aa, chain - ## HITS:1 COG:CAC0187 KEGG:ns NR:ns ## COG: CAC0187 COG0363 # Protein_GI_number: 15893480 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Clostridium acetobutylicum # 1 240 1 238 241 184 37.0 1e-46 MKIVVCKDYDDVSRVMAEKVVEQIRKKPNLVFCLPAGNSPIGMYKYLVQMYKEGKADFSQ LRTFDMDEYAGLTPDDSHSFIYFMHQHFLDHVNINMDNVRYPKADAADLDAECKQYAQEI IDAGGLDIAITSIGDDGHIAFNEPGEYLLPRTHVVKMDEATRQQNAKAFADCAGGVPEYA ITTGMEEHMKAKKYYVVCSGTHKGKLLHKLFENEKLDPKFPVSWLRMHPDVEFIIDEATA AEIQEDALEYYREK >gi|312955796|gb|AENW01000035.1| GENE 46 38870 - 39784 470 304 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 9 302 5 301 301 99 26.0 7e-21 MELSILFMKQLLVMFSLSGIGFLLAKLKLISNEGCKELVNLLLYAVIPLTVLNSFLVEKT PEKTQLLLYSLLLSLAVFAVSMLLSYIIYGKRKRVENFSAAFSNAGFIGIPLVQATVGPH AVFYIAGFVAFLNIFQWIYGAYVMGAERRMISFQVIAKNAVLLSFITGFTLYLCDLGNIL FIKDIANTVAYMNSPLAMIIIGVYMSQISFMRMLQRESSYICSLCRLFVIPLASLGLLAV IPLDCCEVKVAICIVLSAPVGANVAMFAQKFHQDYTYAVEIVILSTLMSVVTLPMIVYAA QIVL >gi|312955796|gb|AENW01000035.1| GENE 47 39787 - 40188 278 133 aa, chain - ## HITS:1 COG:SPy1057 KEGG:ns NR:ns ## COG: SPy1057 COG2893 # Protein_GI_number: 15675049 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 2 133 3 138 141 60 25.0 6e-10 MRRLVIASHERMAEGVKNTLDFITNSSFSVYAVNAYTTQIPLENQLQSVFEEFETEDEIV ILTDMLTGSVNQACIPYRNDHVFLITGFNIPAALEILLYPQDKKLSEKELRRIVETARAQ LQLVVSTEELEDE >gi|312955796|gb|AENW01000035.1| GENE 48 40185 - 41414 507 409 aa, chain - ## HITS:1 COG:no KEGG:JDM1_2587 NR:ns ## KEGG: JDM1_2587 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum_JDM1 # Pathway: not_defined # 1 405 1 399 413 161 29.0 4e-38 MLVSTTAIDITPHCPVKLCGYINDIRLAQRTQTAHAPIYAIALRLVLENSQLLILTMDIL SIMKNRAEQIKDSITQAYSIKKEEIFIHAIHTHAGPSGFSADAMGKEYEDNVTYREDVIS RICTGLKPVFAKAEEACAFMGKTEIHGFYDNRNDRNRYYDADAYRLQFRSDDQLIAELVN INVHSTVLGPTNMEISYDLIGTIREELHKRENIYPLLCIGTSADISNRHYREGDDFKELN RTAKGITNQLLEIQNFTEIDMHTLKLDTFSYTVSYDNTLLFSGYQKELEEIQKNLEAETD KTKRKLLLSSKDKFESKLLIHKVHKELKLSLLRFPELLLVTFPGELTSVFGKYIKEQAKT PFTCIMTCTNDHHGYFIEQDQYGRCYEATATLIPKGETEKMIKKLGELL >gi|312955796|gb|AENW01000035.1| GENE 49 41418 - 42224 621 268 aa, chain - ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 3 268 8 275 275 193 38.0 2e-49 MMTNNEKKAILSNKDLNQVGIRWFMSIETFNYETQLAGSYAFAVMPALRKIYKDDSELTE AMDNHFKYFNCMPWLTNLILGATLALEDNQGIQAKDAVQDLKVSLMGPLSGIGDSIFFIL IPTILGSITAYMAQDGNPLGMIVWCIYGIVIGFIRIKSVSWGYKGGLKLVNELGKKLSVF TNSISAMGLTVVGALIPSLVKVTTPLVFKMGEVTQEVQTILDTIMPAMIPAIFTFISYKL LGRNVKISWLILIIIVFSWICAAFGILA >gi|312955796|gb|AENW01000035.1| GENE 50 42211 - 42984 792 257 aa, chain - ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 5 251 7 252 267 158 41.0 1e-38 MNAIQIILITLLAALKKVDQKGPQIFIYNTVFWGFLAGAIMGDIMTGMAIGATFQLMSLG VAAIGGTSVPDYQIGAIISIAIAVSTGQGIEAGIAVGLPVAMLAVQLDVLGNIAHGIFVR KAQTYATERKWNSFNMMYIICIIITALTTGLPTFLAVAFGDVLVTTIIDAMPVWFTSGLS LAGKILPVVGFAVLLKYMPVKQNIEYLLIGFVFAAYLNVPVLGVAIVGAALGFKLYKDQN RSLEMAVSAGGEQYDDE >gi|312955796|gb|AENW01000035.1| GENE 51 43022 - 43495 595 157 aa, chain - ## HITS:1 COG:SP0061 KEGG:ns NR:ns ## COG: SP0061 COG3444 # Protein_GI_number: 15900006 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 157 1 158 158 99 35.0 2e-21 MAIVLTRIDNRLLHGVVATQWAPSTGCTRLMVIDNEVADDPQKKETMKFGRPSGVNLSII NEETALTNFKNHKYDTQKVFIVTKHPEILLKIAAVEPLKKVNIGGTVRIENGVELSNRAM ADEKDIIAYKELTKLGAKVEIQYVPSDKATPFEAIVK >gi|312955796|gb|AENW01000035.1| GENE 52 43512 - 46202 2183 896 aa, chain - ## HITS:1 COG:STM4534_2 KEGG:ns NR:ns ## COG: STM4534_2 COG3933 # Protein_GI_number: 16767778 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 515 882 82 448 461 213 33.0 2e-54 MYSGTKKLILDYLMDETAYLKRKNRHHYSSAYIADKFVISRSLSSHYLNDLYKEGELIKV NERPVLYLHKDILRSRIRGKSLRSEYDTVEDLEELLHMGVSKFTNVIGSDYSLRSSIENI KKALHYPPHGLPIVLCGKPGSGKRFLSRQIYAYCQAEQLISENAEYTYISCDTIEEPELF TLLFGKNDEKSNETGILKNSKYEYIVFNSFRNAGKNIQNALADYIDEGAALNEPKAKLIF LCNQQLEMTFTPQLLGRLLTIVTIPSLKERTIYEKESLILHFIREESKKVQKGLKVTDYF MELMIAQDFEDSIEQLQSAIVRSFFHAYEKKEEHICLDVSCIPSELKYRVSVYDKEHAYL LEEYQLIYHGITKELFYDILRYAEEYYYDTASKSGKRLYAAVEKFNDHIIFRLPKFQKSL EQYKAIIQSVTDICHSRSNISFSNNMQNLMVFSLYCQSIEYQIFYEFMERYEERIKTLLT MLYDVESKEYQVYSEVEFLLHKTFSIETNAFLKLLMILNLKYDQTAFDNDYAVGLIICHG YSTASSIANAANALLAEQVYVAFDMPLDVQVDEIVKKIDTYLNEKQFLDNALILVDMGSL ELIGNKIRNRYDINIGIINNTTTSMALHIGYGILQKRNIQEILQEASKQTVCTYNFIQKK AKKKAIIFTSESGMSTAEKIKALFQDSIPKTIPIQLISYDYYQILNEQTQEEITGSYDVL FVAGTMDPKLAGSDFIDLGDIINLRAIRRINDIFRNYMGDDEIQQFNDDLLKNFSLINVI ESLTILNPRALLDIVEKSIHLLEREQSSKIDPKILIGLYVHICCFVERMVKRIPVKTYPD LQKFEVEQKDFIHHMRIAFQELSQHYGIEIPCSEIAYIYDYMHILNGNDKEVYSDE >gi|312955796|gb|AENW01000035.1| GENE 53 46779 - 47375 529 198 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2704 NR:ns ## KEGG: Cbei_2704 # Name: not_defined # Def: RDD domain-containing protein # Organism: C.beijerinckii # Pathway: not_defined # 8 195 3 196 199 128 37.0 1e-28 MEDTVKLKWYFRLFSKLDNEACNVDMTNRAVAWGIDWIAGSLITAFPTVIFYMALTKTQE VNQNLLAFDQPYGWVAGILSLLFCIAYYVIYPYRHNGQTCGKKFMDMKIVKRDGSDIDLK SLCKRQILGCIILEGCLIPGGSYVCQLLSLAAGYDLTLVLGVASGVICLLSIYIAMKKKS RRMIHDYLADTKVVAIEK >gi|312955796|gb|AENW01000035.1| GENE 54 47760 - 48719 914 319 aa, chain + ## HITS:1 COG:no KEGG:LA_1827 NR:ns ## KEGG: LA_1827 # Name: not_defined # Def: hypothetical protein # Organism: L.interrogans # Pathway: not_defined # 14 270 10 267 289 65 22.0 3e-09 MENTKANTVLDYCNDVFFKYTLSREDEGSVYARNTIIERVTGIKVKESTVQNSNLDPGTI GKKRIILDVHVKDEKGRFFNLEMQTTYAGVAEMMRFEFYGARALNNQLDSSEKYKDLKPV YQIIFIEKCAWNNKNLINHYRMRNEQGEDESKHPLIRRTYIYLPVINEIAKKKAIQQMDD FEQLCFLFENNAKNDILESKERLVKVFVNKYEEMQKDDELWSTAMAIQMGEARYRYGLED SFEEGMKEGIIKGKAEGKLEGERQLLHRLMEAKFQEDCTAWLQSLTEDQLHIVSNLLLEC DTLEELKNRIKAILNNTSK >gi|312955796|gb|AENW01000035.1| GENE 55 48908 - 49675 969 255 aa, chain + ## HITS:1 COG:TVN0967 KEGG:ns NR:ns ## COG: TVN0967 COG0730 # Protein_GI_number: 13541798 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Thermoplasma volcanium # 10 251 8 248 249 61 23.0 2e-09 MLYTFVICFIAGIGAGLGTGFAGMSAAAVISPMLITFLHMEPYMAVGIALASDVLASAVS AYTYGRHGNLDIRNGLVMMIFVLIFTLVGSYVSSLVPGTAMGGFSTFMTLLLGIKFIVRP VMTTKSSMEHTDPKKRLMQSMLSGAMVGFICGFIGAGGGMMMLLILTSVLGYELKTAVGT SVFIMTFTAFTGAVSHFTIGGMPDMTALVLCIASTLLWARIAARFANKASAKTLNRATGV VLTVLGIAILAVNYL >gi|312955796|gb|AENW01000035.1| GENE 56 49827 - 50816 921 329 aa, chain - ## HITS:1 COG:L51032 KEGG:ns NR:ns ## COG: L51032 COG0111 # Protein_GI_number: 15673970 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Lactococcus lactis # 45 320 45 320 325 218 38.0 9e-57 MKISRDKLHLLELSGFEREQLARIPDSYIVTCADRTSVSAAMVKEADVIIGRVPVEFLGY ARKLRLLQLDCAGSEQYTADGLLAKDCQLCNASGSFGLAISEYLICTILMLMRNMNLYIR NQEQAYWHMEGPVQSIYGSTVLIAGTGDLGQEFAKRVKAMGAHTIGIRRRIQESVPYFDE LHTMEEMCNLLPHADVVVLALPSTERTRGCFGSEQLACMKKTAILANVGRGDALNTNEFL QAIQRKQLSGAVLDVCDCEPLAKEHPLWKQPNVIITPHISGTFQLKESFYRFTEIALYNL QALLENKALKNVVDRKQGYRVHTVDYKEK >gi|312955796|gb|AENW01000035.1| GENE 57 50803 - 51267 519 154 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1592 NR:ns ## KEGG: CDR20291_1592 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 8 148 11 151 151 108 39.0 4e-23 MYMNEELIQEKLEEMNATKIQKLDSQMYLVNFDLKEDMRISYVFNITREGKYFLQRMRPY SMVHGKFSNEYEVLSFIKHDVEKFQNAANSTNFIKFLEISNKGLQLTEEIENAFLNYNVD GEILDELNEKMEEVFDQIYLLSDISRRVLLHEDK >gi|312955796|gb|AENW01000035.1| GENE 58 51406 - 52350 770 314 aa, chain + ## HITS:1 COG:VCA0024 KEGG:ns NR:ns ## COG: VCA0024 COG0679 # Protein_GI_number: 15600795 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Vibrio cholerae # 1 314 17 330 330 142 31.0 1e-33 MENLIFCLNATIPVFITMIFGYFFKRIHLFDAAFLSKMNKFVFVAALPVLLFEDISTTDL RKAWDTSFVIFCFLATLLSILFSIAVSYRLKDRSIQGEFVQASYRSSAAILGIAFIQNIY GNSGMAPLMIVATVPLYNIIAVIVLSLMKPKRGVLRKELILQTGRDILCNPIILGIGAGM LWSLLRIPQPVILQKSLHNLGALATPLGLMAMGGSFEFHDLYAKRKPALICSFMKLILFV AIFLPIAVSLGFVNDKLVAILVMLGSATTVSCYIMARNMGHEGTLSSSVVMMTTLGSAFT LTMWLYILKSLGTL >gi|312955796|gb|AENW01000035.1| GENE 59 52362 - 53489 783 375 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_0185 NR:ns ## KEGG: CCV52592_0185 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: C.curvus # Pathway: not_defined # 1 375 1 377 378 319 47.0 9e-86 MQLIKHVHIFAPQDLGIQDILISEGHIAHIAPHIETAPYMEITDGSGKQLTPGLIDRHVH VSGGGGEGGFATRTPEIQLSALIQAGITTVVGLLGTDGVTRSVEDLIAKVKALKSEGISA YAMTGSYAYPSTTITGSVKKDILFIDEILGVKLALSDHRSSHISFEEFLRLASEVRTAGM LSGKPGCMTLHMGDEADDLAYVMKAVKNTGLPCTMFHPTHVTRNEQLFQKALQLLYMGGT IDITCEEHGGCASWIKQANPKDYGRITVSSDGQGSWSDYDEYGNLTAIGVSDVSVLLQNV QKMMRNQDFSITECISFSTANPARVLGLYPAKGCISVGSNADLLLFDDDWQLHDVMANGR WFMKNQKLLKKGTLE >gi|312955796|gb|AENW01000035.1| GENE 60 53934 - 55031 1360 365 aa, chain - ## HITS:1 COG:BS_metK KEGG:ns NR:ns ## COG: BS_metK COG0192 # Protein_GI_number: 16080107 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus subtilis # 5 359 7 386 400 378 53.0 1e-104 MKNYIFTSESITEGHPDKICDRIADSILDEALRQDPASKMAVEATIKDDFVLIYGEANTK AKLEYEEIAKEVIREIGYTEEYEVLVKVREQSSEINHAVVQDDGEIGAGDQGIMFGYACD DTDNYMPAAIEYAHKLAKRLSDVRRGNALLLPDGKTQVSVEYENDKIKRIDTIVVSTQHV AEASQQQIADIVMKDVITPVIPDELLDEDTIYLINPSGSFVMGGSFGDSGTTGRKIVVDS YGGMGRIGGGCFSSKDPSKVDRSAAYYCRYVAKNIVAHQLASKCEVQVAYAIGKVKPVSI MVDTFGTGNKSDEEILDIIRSNFSFEVKDIIEELKLCRPIYKATSCYGHFGREEFSWEKI KDLKY >gi|312955796|gb|AENW01000035.1| GENE 61 55275 - 55472 194 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSCSIFNGRVGMTVTDNEIYRIIVDIMDIQNEPENIFELDNWIRQIGLQEVYKKIIQIY SINLM >gi|312955796|gb|AENW01000035.1| GENE 62 55955 - 57421 1081 488 aa, chain + ## HITS:1 COG:MA0901 KEGG:ns NR:ns ## COG: MA0901 COG0733 # Protein_GI_number: 20089780 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Methanosarcina acetivorans str.C2A # 4 452 9 454 459 493 58.0 1e-139 MKSREKLSSRLGFILISAGCAVGLGNVWRFPYITGQYGGAAFVLLYLVFLILLGLPIMVM EFSVGRASQRSAAKSFDLLEPEGTKWHLIKYVCMGGNYLLMMFYTTVGGWMINYCLKMAS GTFEGLRTEQVGEAFSNMLASPGQNLFWMIAITVIGFFICSRGLQNGVEKMSKYMMSCLF IVMLVLVIRAVTLPNAVEGLKFYLIPDFQKMMANGLWDAIFAAMGQAFFTLSLGIGALAI FGSYIGKDRSLLGESLNVCILDTCVAFIAGLIIFPSCFSFNVAADSGPGLVFVTLPNVFN AMSGGRLWGFLFFLFMSFAAVTTIIAVFENIVAFAMDSGWSRKKAVRVNFILILLLSLPC AFGFNLLSFIEPLGDGSTIQDLEDFIVSNNMLPLGSLMYLLFCTFRYGWGWKNFTDEANS GVGFQFPMWARFYVSYILPVVVIYIFFQGYIEKFAKPWNILIPSVLLLLMIYVPLQAWRK KRANNKNT >gi|312955796|gb|AENW01000035.1| GENE 63 57524 - 58279 628 251 aa, chain - ## HITS:1 COG:SP0923 KEGG:ns NR:ns ## COG: SP0923 COG0561 # Protein_GI_number: 15900803 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 247 2 269 269 63 26.0 4e-10 MKALASDFDGTLYLHDAAESYREGDIAGIGQLQKQGCLFGLCTGRPLWGITAFLSKRLHP DFYIVSSGAMILDRNQRILFESCLLPETAKRLSMLTKDVESTAIQAGGNIYAYKKARAFT DIPVIHDIEEIKGQQIHGLSFRMTDEAAAEQLCSSLEKQFPDTCAAFQNQNFVDVVPYGC SKGKALLKLKKLMNLDSCYGIGDSYNDIPMLQDADVSFTFHASPKKVKEAADHLVDSVGE AIQSYMLRKEN Prediction of potential genes in microbial genomes Time: Sat May 14 02:26:49 2011 Seq name: gi|312955695|gb|AENW01000036.1| Clostridium sp. HGF2 contig00006, whole genome shotgun sequence Length of sequence - 95061 bp Number of predicted genes - 96, with homology - 83 Number of transcription units - 45, operones - 22 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 32 - 1324 1606 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Prom 1352 - 1411 8.6 - Term 1430 - 1471 5.6 2 2 Tu 1 . - CDS 1476 - 2873 1616 ## COG0534 Na+-driven multidrug efflux pump - Prom 2920 - 2979 3.6 3 3 Tu 1 . - CDS 3008 - 3685 326 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 - Prom 3713 - 3772 4.6 4 4 Tu 1 . - CDS 3809 - 4102 260 ## - Prom 4313 - 4372 4.4 5 5 Tu 1 . - CDS 4375 - 5751 1176 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 5787 - 5846 6.3 + Prom 5746 - 5805 4.5 6 6 Tu 1 . + CDS 5867 - 6382 529 ## COG4720 Predicted membrane protein - Term 6331 - 6368 -0.1 7 7 Op 1 . - CDS 6379 - 7737 1108 ## COG0534 Na+-driven multidrug efflux pump 8 7 Op 2 . - CDS 7730 - 8569 853 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 8683 - 8742 5.1 9 8 Op 1 . - CDS 8884 - 9453 443 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 10 8 Op 2 . - CDS 9464 - 9844 215 ## 11 8 Op 3 5/0.000 - CDS 9844 - 10449 564 ## COG0500 SAM-dependent methyltransferases 12 8 Op 4 . - CDS 10504 - 11112 473 ## COG1309 Transcriptional regulator - Prom 11241 - 11300 3.1 - Term 11270 - 11303 3.1 13 9 Op 1 8/0.000 - CDS 11433 - 12854 1381 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 14 9 Op 2 7/0.000 - CDS 12868 - 14802 1975 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 15 9 Op 3 . - CDS 14907 - 15764 1030 ## COG3711 Transcriptional antiterminator - Prom 15870 - 15929 8.3 + Prom 15975 - 16034 4.7 16 10 Tu 1 . + CDS 16100 - 16681 499 ## CPE0376 hypothetical protein + Term 16782 - 16838 -0.3 17 11 Op 1 2/0.000 - CDS 16855 - 18519 2342 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 18 11 Op 2 15/0.000 - CDS 18533 - 19528 1270 ## COG0059 Ketol-acid reductoisomerase 19 11 Op 3 32/0.000 - CDS 19588 - 20079 662 ## COG0440 Acetolactate synthase, small (regulatory) subunit 20 11 Op 4 . - CDS 20092 - 21762 2017 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 21 11 Op 5 . - CDS 21775 - 22977 1509 ## COG1171 Threonine dehydratase + Prom 23293 - 23352 8.2 22 12 Tu 1 . + CDS 23374 - 24693 1553 ## COG2607 Predicted ATPase (AAA+ superfamily) + Term 24796 - 24831 4.0 - Term 24784 - 24818 3.8 23 13 Op 1 . - CDS 24908 - 26347 1463 ## Amet_1887 peptidase S41 24 13 Op 2 . - CDS 26328 - 27779 1421 ## COG2199 FOG: GGDEF domain 25 13 Op 3 . - CDS 27823 - 28797 878 ## Elen_0050 diguanylate cyclase with extracellular sensor - Prom 28819 - 28878 9.1 26 14 Op 1 36/0.000 - CDS 28880 - 29551 278 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 27 14 Op 2 . - CDS 29563 - 30993 1239 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 28 14 Op 3 . - CDS 31092 - 31955 1087 ## COG1284 Uncharacterized conserved protein - Prom 31982 - 32041 5.1 + Prom 31944 - 32003 5.5 29 15 Tu 1 . + CDS 32179 - 33900 1840 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 33911 - 33948 4.1 30 16 Op 1 . - CDS 33924 - 34109 277 ## 31 16 Op 2 . - CDS 34161 - 34667 416 ## COG0778 Nitroreductase - Prom 34758 - 34817 5.7 32 17 Tu 1 . - CDS 34948 - 36051 499 ## PROTEIN SUPPORTED gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 - Prom 36159 - 36218 3.2 33 18 Tu 1 . - CDS 36246 - 36575 199 ## COG0675 Transposase and inactivated derivatives - Prom 36656 - 36715 5.7 34 19 Tu 1 . - CDS 36738 - 36911 77 ## BCE_3918 IS605 family transposase OrfB - Prom 37074 - 37133 4.0 35 20 Op 1 . - CDS 37159 - 37416 194 ## Pmob_0121 IS605 family transposase OrfB (EC:2.1.1.37) 36 20 Op 2 . - CDS 37448 - 37639 133 ## COG2452 Predicted site-specific integrase-resolvase - Prom 37751 - 37810 5.4 37 21 Tu 1 . - CDS 38025 - 38453 355 ## gi|160915918|ref|ZP_02078126.1| hypothetical protein EUBDOL_01941 - Prom 38500 - 38559 4.1 - Term 38527 - 38561 2.0 38 22 Op 1 . - CDS 38574 - 39041 659 ## COG0251 Putative translation initiation inhibitor, yjgF family 39 22 Op 2 . - CDS 39052 - 40326 1307 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 40387 - 40446 6.3 40 23 Tu 1 . - CDS 40462 - 41004 557 ## - Prom 41055 - 41114 2.9 + Prom 40994 - 41053 3.6 41 24 Tu 1 . + CDS 41089 - 41334 343 ## BMD_1923 hypothetical protein + Term 41353 - 41398 5.1 - Term 41341 - 41386 5.1 42 25 Op 1 . - CDS 41479 - 41976 499 ## TERTU_4467 acetyltransferase, GNAT family 43 25 Op 2 . - CDS 41973 - 42566 558 ## gi|293401529|ref|ZP_06645672.1| conserved hypothetical protein 44 25 Op 3 . - CDS 42563 - 43072 497 ## COG0219 Predicted rRNA methylase (SpoU class) 45 25 Op 4 . - CDS 43074 - 43661 346 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 46 25 Op 5 . - CDS 43658 - 45331 1720 ## COG1032 Fe-S oxidoreductase - Prom 45356 - 45415 6.5 + Prom 45305 - 45364 5.2 47 26 Tu 1 . + CDS 45402 - 46232 757 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 48 27 Op 1 . - CDS 46324 - 47658 1170 ## gi|160916246|ref|ZP_02078453.1| hypothetical protein EUBDOL_02273 49 27 Op 2 . - CDS 47658 - 47858 159 ## 50 27 Op 3 . - CDS 47867 - 48877 607 ## gi|160916245|ref|ZP_02078452.1| hypothetical protein EUBDOL_02272 51 27 Op 4 . - CDS 48861 - 50027 733 ## gi|160916245|ref|ZP_02078452.1| hypothetical protein EUBDOL_02272 52 27 Op 5 . - CDS 50024 - 50917 1077 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 50939 - 50998 5.8 53 28 Op 1 2/0.000 - CDS 51020 - 52069 984 ## COG1609 Transcriptional regulators 54 28 Op 2 . - CDS 52093 - 52971 845 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 53095 - 53154 6.0 + Prom 52928 - 52987 4.1 55 29 Tu 1 . + CDS 53074 - 53538 536 ## COG1225 Peroxiredoxin + Term 53612 - 53657 2.3 - Term 53711 - 53746 3.3 56 30 Op 1 . - CDS 53920 - 54453 318 ## 57 30 Op 2 . - CDS 54441 - 56507 1652 ## - Prom 56528 - 56587 7.7 - Term 56698 - 56737 -0.2 58 31 Op 1 41/0.000 - CDS 56761 - 58380 1393 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 59 31 Op 2 . - CDS 58403 - 58669 395 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 58718 - 58777 7.9 - Term 58885 - 58921 3.1 60 32 Op 1 . - CDS 59035 - 59970 1063 ## Dred_0437 hypothetical protein 61 32 Op 2 . - CDS 59970 - 61703 1895 ## COG0441 Threonyl-tRNA synthetase 62 32 Op 3 . - CDS 61696 - 62220 447 ## COG3981 Predicted acetyltransferase + Prom 62510 - 62569 7.3 63 33 Tu 1 . + CDS 62675 - 63301 699 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 63336 - 63372 -0.9 - Term 63324 - 63360 -0.5 64 34 Tu 1 . - CDS 63375 - 65279 1589 ## DEFDS_1130 hypothetical protein - Prom 65374 - 65433 3.8 - Term 65413 - 65443 2.0 65 35 Tu 1 . - CDS 65445 - 65996 686 ## COG1704 Uncharacterized conserved protein - Prom 66016 - 66075 5.3 66 36 Op 1 . - CDS 66140 - 67372 1417 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) 67 36 Op 2 . - CDS 67377 - 68282 338 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 68 36 Op 3 . - CDS 68359 - 68649 251 ## 69 36 Op 4 . - CDS 68689 - 69087 429 ## - Prom 69207 - 69266 3.3 70 37 Op 1 . - CDS 69330 - 70022 524 ## gi|237733196|ref|ZP_04563677.1| predicted protein 71 37 Op 2 . - CDS 70023 - 70874 907 ## gi|237733195|ref|ZP_04563676.1| predicted protein 72 37 Op 3 . - CDS 70792 - 71817 797 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 73 37 Op 4 . - CDS 71819 - 72004 242 ## 74 37 Op 5 . - CDS 72064 - 72441 401 ## 75 37 Op 6 . - CDS 72444 - 74027 969 ## COG4886 Leucine-rich repeat (LRR) protein - Term 74040 - 74079 2.9 76 37 Op 7 . - CDS 74083 - 75147 529 ## - Prom 75173 - 75232 5.5 - Term 75348 - 75380 2.0 77 38 Op 1 12/0.000 - CDS 75391 - 76812 1662 ## COG0469 Pyruvate kinase 78 38 Op 2 . - CDS 76862 - 77824 679 ## COG0205 6-phosphofructokinase 79 38 Op 3 8/0.000 - CDS 77882 - 78796 944 ## COG1484 DNA replication protein 80 38 Op 4 . - CDS 78797 - 79993 1265 ## COG3611 Replication initiation/membrane attachment protein 81 38 Op 5 4/0.000 - CDS 79998 - 80675 581 ## COG0237 Dephospho-CoA kinase 82 38 Op 6 4/0.000 - CDS 80588 - 81418 809 ## COG0266 Formamidopyrimidine-DNA glycosylase 83 38 Op 7 . - CDS 81427 - 84012 3454 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 84 39 Tu 1 . - CDS 84118 - 85074 1180 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 85094 - 85153 2.0 - Term 85119 - 85152 -0.9 85 40 Op 1 . - CDS 85187 - 85963 631 ## COG1994 Zn-dependent proteases 86 40 Op 2 . - CDS 85950 - 86525 751 ## gi|293400882|ref|ZP_06645027.1| putative peptidase - Prom 86725 - 86784 3.5 - Term 86732 - 86764 4.0 87 41 Tu 1 . - CDS 86833 - 87942 1097 ## COG0628 Predicted permease - Prom 87962 - 88021 5.2 - Term 88130 - 88177 10.0 88 42 Op 1 . - CDS 88203 - 88979 899 ## COG2894 Septum formation inhibitor-activating ATPase 89 42 Op 2 . - CDS 88964 - 89530 451 ## gi|293400885|ref|ZP_06645030.1| putative septum site-determining protein MinC 90 42 Op 3 . - CDS 89503 - 90057 587 ## gi|293400886|ref|ZP_06645031.1| putative rod shape-determining protein MreD 91 42 Op 4 . - CDS 90060 - 90896 1128 ## COG1792 Cell shape-determining protein - Prom 90921 - 90980 5.9 92 43 Op 1 . - CDS 90993 - 91682 797 ## COG2003 DNA repair proteins 93 43 Op 2 . - CDS 91679 - 92083 621 ## gi|293400889|ref|ZP_06645034.1| conserved hypothetical protein - Prom 92270 - 92329 3.5 94 44 Tu 1 . + CDS 92301 - 92894 658 ## gi|293400893|ref|ZP_06645038.1| microtubule-associated protein 1B + Term 92897 - 92934 2.3 + TRNA 93353 - 93440 63.8 # Ser GGA 0 0 95 45 Op 1 . - CDS 94008 - 94214 106 ## - Term 94224 - 94253 1.2 96 45 Op 2 . - CDS 94266 - 95012 769 ## Cphy_2094 PHP family histidinol phosphatase/hydrolase Predicted protein(s) >gi|312955695|gb|AENW01000036.1| GENE 1 32 - 1324 1606 430 aa, chain - ## HITS:1 COG:BH0607_2 KEGG:ns NR:ns ## COG: BH0607_2 COG0519 # Protein_GI_number: 15613170 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Bacillus halodurans # 116 430 1 315 315 410 62.0 1e-114 MKQDMIVILDLGSSENTTLAREIRALGVYSEIYPHDITKAELQKLPNVKGVILNGGEHRN VDGKDIDVLPEIYEAGYPVIAIDHAPALCEQKLEEWPSEEVLKTFVFTVCKAEANWNMKN FVADQVELIREQVKDRKVLLALSGGVDSSVVAALLLKAIGKQLYCVHVNHGLMRKGESES VIEVFKNQMDANLIYVDASERFLGKLKDVAEPEQKRKIIGAEFIRVFEEEARKLKGIDFL AQGTIYPDIVESGTKTAKVVKSHHNVGGLPDDLAFELVEPLRQLFKDEVRACGLELGLPH DMVFRQPFPGPGLGVRCLGAITKDRLEAVRESDAILREEFATAGLDQKVWQYFTIVPDFK SVGVKNNARSFEYPVILRAVNTIDAMTASIEDIDWPVLHRITDRILKEVANVNRVCYDLT PKPCGTIEWE >gi|312955695|gb|AENW01000036.1| GENE 2 1476 - 2873 1616 465 aa, chain - ## HITS:1 COG:lin2873 KEGG:ns NR:ns ## COG: lin2873 COG0534 # Protein_GI_number: 16801933 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 5 445 4 442 450 197 29.0 4e-50 MQTIEQNKMGYKPVLPLLMSMAFPPMLSMLIQSLYNIVDSMFVAQIGEDALTAVSLAFPI QTLIVACSVGIGVGVNSYIARKLGEQNQKEANSAVAHGLLLSLIGYLLFVAIGSFTIRPF FEMFTDSAAILDDACMYTYVCVFLCFGCFFHILIEKVFQSMGKMIFPMAIQAAGAITNII LDPIMIFGLLGFPAMGVKGAAIATVIGQIFAMSLSLFIFLTRKFDVKLDLKQFHFSWDTI RRILSVGIPNACMNALGSVLVIGLNSILIQFSNTAVSVYGIYYKLQTFVFMPASGLTQGA MPIMGYNYGAGSHERLLQTLKYAIMVTLAIMVCGCAIFLLFPTQLLMLFHASEDMLRIGV PALRIISISFLPAALGFILPTLFQAMGLGLQSLIVFLLRQLCITLPLSWLFAAWFGLDGI WYSFLIAESIAAGVAVLLFIRIRKKDKVLSSTFVQQPSASQEAVC >gi|312955695|gb|AENW01000036.1| GENE 3 3008 - 3685 326 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 14 198 15 202 236 130 34 3e-29 MMNIMQLETQMEFLVRILLAGICGGIIGYERKSRNKEAGIRTHLIVASGAALIMIVSKYG FSDILGDKGIALDPSRIAAQIVTGVGFLGAGMIFMRKNTISGLTTAAGIWATSAIGMAIG SGLYALGILTAVLIVFVQIILHRNHRWLRESYKEELSFVIDQNKEALQDLQERLKRMQIE ILNVSLTQEHSCYQVDLIVVLPDTYQAAKLLDMFHDVAYIHEIDA >gi|312955695|gb|AENW01000036.1| GENE 4 3809 - 4102 260 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLVEHTFSQELQECKLTRISYDESAYRQFADGFKKQKSDEVMVIYTDFITVSNVFHAGD HTLEPNAEYTAYPWVLRRSSAQKEWTIIGSGYGFLYT >gi|312955695|gb|AENW01000036.1| GENE 5 4375 - 5751 1176 458 aa, chain - ## HITS:1 COG:BS_ydeL KEGG:ns NR:ns ## COG: BS_ydeL COG1167 # Protein_GI_number: 16077591 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 8 448 7 459 463 235 31.0 1e-61 MKLKTINFERTTGKALYLQIYEKLRSDILSGYLVKGDQLPSIRKCEALMKVSKTSIERAY EKLLEEGYILSIPQKGFFVDVEPENVQLRKAVLAQGAALQDEKIRYDFRSQTMDVSSFDL TLWKKYLKEVLDGHYEIATYGEARGELRLRMALQKYAYTVRGVLCTSNQLLIGSSFQSLL YVLCGLLDKPVVIGLEESGFPQAEAVFHDYAFPVRRLSREADGICKQELLASDVNLLYVN SASAGYNHQPLDKKKRRELLAWAAQRNAMIIEDDHNGELRYHTRMTPAMQGFDTGGHVVY IGSFSKILLPSLRISYMVIPQALQHRYDQRANSYSPTSSKIEQLALARYIADGHLERHVR RLRRHYEQKSSHMRTLLEQWFPQADILLEEAALQFILRFPYSLPLESLIQEARKHSMMLQ RNAQGELVLSFAAIKMEDMEEAVRLLHSLLEAATGRNH >gi|312955695|gb|AENW01000036.1| GENE 6 5867 - 6382 529 171 aa, chain + ## HITS:1 COG:PAB2090 KEGG:ns NR:ns ## COG: PAB2090 COG4720 # Protein_GI_number: 14520604 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus abyssi # 9 160 41 192 199 68 34.0 6e-12 MKTMKVNDIVTAALGIALVFLATWLLKVPNGIQGYFNLGDGFLLLFASVLNPFLAFMVGG VGSALADITGGYGMYALFTLLIKGMEAVLVSWLVCRGRSSFRYVAYILGGLLMVGGYFLA DAYINQSWQLSLTGIPGNLVQAAAGYVIALAAYPLLQKRMHRHPDMHHKTV >gi|312955695|gb|AENW01000036.1| GENE 7 6379 - 7737 1108 452 aa, chain - ## HITS:1 COG:BH4045 KEGG:ns NR:ns ## COG: BH4045 COG0534 # Protein_GI_number: 15616607 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 12 444 13 447 447 290 40.0 4e-78 MRENTLDTTRTLPQLLRFVAPSIVMMLAMGIYTITDTLFVSRLVNTDALSAINIVCPMIN LIIGLSSMLASGGVAVLCRDMGAGLLEKVRKNAALLCVCTIGLGCVLAIGGLLFTDELLQ LLHAKGRILPYARGYLSMLLLFTPFCMLQVLYQSMFVAAGRPLLGMLLAMCAGGVNVALD LAFMSGFHMGIEGSALATGIGYMVPAIYGTLFFLQRKERELHFARPAWDASMLKESCLNG SSEMVSQLASALTTLLLNTILFRLHQEDGVAAGTIIVYTQFLLTSLYIGFSMGAAPLISY QYGRKDTARLLQLLRKCIGIVVISSLAIFVTTILFQRPLVTLFTDKDTSVYRIALQGFAI FTFSLLFSGFNIFSSAMFTALSQGRLSALISFSRTFGFYLLFLLILPRWLGSRGVWLAIV LAEGCSLLVSLLSIQRHTLTCHLADRKKNRLY >gi|312955695|gb|AENW01000036.1| GENE 8 7730 - 8569 853 279 aa, chain - ## HITS:1 COG:BH3634_1 KEGG:ns NR:ns ## COG: BH3634_1 COG2207 # Protein_GI_number: 15616196 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 8 116 7 115 132 92 42.0 1e-18 MNEKQELVIRTLSYLEEHLQETLSLQTVAQLMQYSPYYLHRSFTQLCGMRMHDYVKRRRI SEAARCLCETDASVLEIAISYGYESSQAFSQAFKQLYKMTCTQFRREQQYYALQHPLQLH ELNQTESAMRELQIRQAVPRDMDTWMQLMRQAVDFFPYLEEAAYEQQLLKCMKQKEAFLA SFEKTAFAAIQLQLKSGQIDVLAIHPQLRCLDAVKQLIEWMQCTCAPHTDLVITCFRAAD RADAGYRRLLLEAGFVCGEELVELGYPVQRLYYRRTQDA >gi|312955695|gb|AENW01000036.1| GENE 9 8884 - 9453 443 189 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 4 180 2 180 185 175 48 9e-43 MEKKRCFWAENVPEIYVRYHDEEWGREVHDDHKLFEMLLLESFQAGLSWLTILKKREAFR EAFDAFDVAKVAGYTEEKQKELMQNPGIIRNRLKIRAAVKNAVIFQQIQREYGSFSAYLW GFTEGKVIYRTQKELPTHTALSDEISADLYKRGMRFVGSVIIYSYLQAVGIVNDHEPDCF LHTSSKACG >gi|312955695|gb|AENW01000036.1| GENE 10 9464 - 9844 215 126 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLTVSQQKYLQVIDILEQEQGVVRQIDVAVYLGYSRASVCRAVKSLKAKGLIVQRAHEIE LSAYGKALGRQLNEVRTRMQEALYASGFPKGLDPVSALQLPICFKEELSTIAGQLPAASG IIKQKK >gi|312955695|gb|AENW01000036.1| GENE 11 9844 - 10449 564 201 aa, chain - ## HITS:1 COG:CAC3419 KEGG:ns NR:ns ## COG: CAC3419 COG0500 # Protein_GI_number: 15896660 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 5 180 10 184 207 142 39.0 5e-34 MNKTEQSRIAFDQQADTYDSDFHGKHARELYPFMLELMIQLPVRDVLDLGCGTCALMKQL YDEDCGRRFTGIDLSEGMLHIGTQVMKERATLLLGDAANLPFADASFDLVYCNDSFHHYP DPCRVLQEVVRVLRYGGYFVIGDCTQGTVSRMLMNLFFHFQKEGDVHMYSEKEIRMLLQK QLHDVHVQRVNERSLIAWGVK >gi|312955695|gb|AENW01000036.1| GENE 12 10504 - 11112 473 202 aa, chain - ## HITS:1 COG:MA2782 KEGG:ns NR:ns ## COG: MA2782 COG1309 # Protein_GI_number: 20091605 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 7 162 2 157 201 70 28.0 2e-12 MGQRIRTRVVKDPAERKREILDGAMELFATKGYEQTSMRDIARHLNISLGLCYRYYDSKQ KLFQEAMQQYVEDICAAYFTILHDETRDLTEKLDLLFHMLKEEEQQMRYHDFFHQPENIG FHEELAVKLCKYMQPHLQQELQRYAKQNHLKIQHEELLLSFLTYGQIGSHASVSSPDTQQ LHQLRVYIDLLLKQECIPDDTI >gi|312955695|gb|AENW01000036.1| GENE 13 11433 - 12854 1381 473 aa, chain - ## HITS:1 COG:L121426 KEGG:ns NR:ns ## COG: L121426 COG2723 # Protein_GI_number: 15673653 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 470 1 471 477 603 58.0 1e-172 MKFPENFLWGGALAANQCEGAWQTAGRGLANVDVCPRGDHRSAIITGRERRTSCLLDEVY PSHEGVDFYHHYKEDIALFAEMGFKMLRISISWTRIYPKGDEMEPNAAGLQFYDNVLTEC ERHGMEVMITIAHFDCPMHLIQTLGGWRSRAMIEHYLRLCKTLFLHFKGRVRYWLPFNEI NMILHAPFLGAGICFEAGENKEQVMYQAAHHELIAGALATKLAYDIDPKNQIGCMFAAGS VYPYSCHPQDVWQARMEDRKSYLFCDVQVRGAYPSYFHQLLKEKQIDLHMEEDDVNILKN TVDFISFSYYNSRCVSSRQEAKKQNKGNLFASVKNPYLTCSDWGWPIDPLGLRITMNDIY ERYQKPLFIVENGLGMADEIEEDGSIRDDGRIAYLHDHIKAMQQAVCEDGIELLGYLAWS PIDQVSASSGEMKKRYGFIYVDRQDDGSGSFVRKRKKSFSWYAHVINTNAVES >gi|312955695|gb|AENW01000036.1| GENE 14 12868 - 14802 1975 644 aa, chain - ## HITS:1 COG:BH0595_2 KEGG:ns NR:ns ## COG: BH0595_2 COG1263 # Protein_GI_number: 15613158 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 85 460 2 379 399 339 46.0 8e-93 MTVYETLAKEILNYVGGKDNVNSLTHCITRLRFKLKDESIAQDEALKNLEGVVTVMKSAG QYQVVIGNQVQDVYEQLVPLLHAEQPQTVQDAEKEKLLDRFVDIISGIFQPILGIMAACG MIKGLNMLFMTLGLYAETSGGYMIINAIGDALFTFLPLFLGYTSARKFGLKPMVGLVIGG IMCYPGIQSSALSGSLKPLYTMFEGTMFASPVYIDFFGIPVISMDYTSTVIPVIFIVYFA SKCEKLFSKFVPDLVKFFFVPMLTLLVALPIGFLLIGPVATFGSKIIAETIISIRNVSPM LAGGLVGLTWQILVIFGLHWGFIPVYINNIVTNGYDNVMMPFFACTFATSAVILVIMLKT RDRKMKELCLPNFISGIFGVTEPGIYGILLPLKKPFIISCIAGGIGGAFYGFCNFRKFSM GGMGIFEFPAMMEPDGSWGNLLVAVSGVLLTMIVAVILMLLFYREKEAGQSDKTMLDTKE QEESVEDTPALLEDIAICSPLKGDVLELAQVEDAAFSAGILGKGCAIVPAEGEVYAPVDG VLTTLFPTKHALGITSDDGVEVLIHIGLNTVQLNGEGFTAHVQQGERVSRGQHLLSFDLA ELKDKGYCLQTPVIITNTNDYLEILSTMQKEVMSDDVLLHVMNS >gi|312955695|gb|AENW01000036.1| GENE 15 14907 - 15764 1030 285 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 274 1 273 277 232 40.0 5e-61 MIFKKRLNNNVVIALDENGQEKILCGKGLGFQMKEQDTVEESRVEKVFALADQVMNRRLQ ELLETIPMEHLELAEEIMNYARIHIDETVSENVIVALCDHMYMAVERKKQGIEVKNVLLW DIQKFYRDEYKVGRYAIALIRERFGVELSEDEAGFIALHIVNGQLHLETKSVREITTLMQ QIETIVRMRFAITLDPDSVYYYRFITHLKFFAERIFSEKQIPTKEMDGLLELIREKYPQD VECVLDIAAFLKQRYGYTLSEEEILYLSIHVSRIHQVSVKGGEAV >gi|312955695|gb|AENW01000036.1| GENE 16 16100 - 16681 499 193 aa, chain + ## HITS:1 COG:no KEGG:CPE0376 NR:ns ## KEGG: CPE0376 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 1 178 1 182 183 89 30.0 5e-17 MNTLDIFLSRINKTYSNKAQHTENPLLPQAVHITTPVNERIKNLPENFEDVFVIDETYYH YDDHVTQLHHLYRYHAQPNGRIQLVSYEIPCEYAKHTFDSQHVQQLLYDELVVKQAFTPI LYSFEHDVFASEGTSEITSGITLHVVMKLYRDHDTVIEACYANRRLVSGFEEPVRYERLM SKSRNDMRLQSLF >gi|312955695|gb|AENW01000036.1| GENE 17 16855 - 18519 2342 554 aa, chain - ## HITS:1 COG:CAC3170 KEGG:ns NR:ns ## COG: CAC3170 COG0129 # Protein_GI_number: 15896418 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Clostridium acetobutylicum # 5 553 3 547 552 620 59.0 1e-177 MGRPSDSVVRGDACAPQRSLFYALGLTEEELNQPLIGVVSAYSEIVPGHLHLDKITEAVK AGIRMAGGTPIMVPSIGVCDGIAMGHIGMKYSLASRELIADSVETMAKAHGFDGLVLVPN CDKIVPGMLMGALRVNVPSVVMSGGAMLPGNDRGKAMSLSTMFEAVGAKKAGLIDQAELT HIEQNACPGCGSCSGMFTANSMNCLCEVLGIALPGNGTIPAVYSARTQLAKKAGMAVMDM VEKDIRPRDIVNEKSLRNGLACDMALGCSSNTVLHLLAIAKEAKVELDLDMINEVSQKTP NLCKLAPAGPDHIVDLYNAGGVQAVMKELSRKQLIDTGLMTVTGKTVAENIATAVNMDTN IIKDIEHPNSATGGIAVLFGNIAPKGCVVKRSAVDPKMMTHTGPARVFDSEEAAIEAIYA GSIVKGDVVVIRYEGPKGGPGMREMLNPTSALAGMQLDKDVALITDGRFSGATRGAAIGH VSPEAAAQGPIAIIQEGDSITIDIPNGNISLNVDAAEIEQRLQAWEKQEPKIKEGWLYRY SRLVASADEGAVLK >gi|312955695|gb|AENW01000036.1| GENE 18 18533 - 19528 1270 331 aa, chain - ## HITS:1 COG:all2315 KEGG:ns NR:ns ## COG: all2315 COG0059 # Protein_GI_number: 17229807 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Nostoc sp. PCC 7120 # 1 331 1 330 331 432 66.0 1e-121 MVKVYYDADCNMDLLKGKTVAIIGYGSQGHAHALNLKDSGVNVVVGLRPGSKSRAKAEEA GLTVLDTAEAAKAGDVIMILTPDQDQPDIYKKDIEPNLEEGNMLMFAHGFSIHFNQIVAP AGVDVTMCAPKGPGHTVRSQYQEGRGVPSLIAVHQDASGKAHDYALAYAGGIGAGRAGII ETTFKEETETDLFGEQAVLCGGVCELMQAGFDTLVEAGYEPEMAYFECIHEMKLIVDLIN SGGFAMMRYSISDTAEYGDYVTGKRLITEETRKEMKKVLTEIQDGTFAGNWITENKAAGR SHFLAMRRVHAAHPSEKVGEKLRKMMSWLKK >gi|312955695|gb|AENW01000036.1| GENE 19 19588 - 20079 662 163 aa, chain - ## HITS:1 COG:sll0065 KEGG:ns NR:ns ## COG: sll0065 COG0440 # Protein_GI_number: 16331478 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Synechocystis # 3 155 18 170 188 99 38.0 3e-21 MNRAVLSILVSNHFGVLTRVTNLFSQRGFNIDSLAVGETENENYSRITITTSGDAASVNQ IKLQLDKLEDVKIVQEIPDEQLFIREVMLVKVAPRVNQMEAFEKCVEDFNGRTQIIEDGC CIVELTDTPASVNYFLEELREYHIKEISRTGGAALQLSTETVY >gi|312955695|gb|AENW01000036.1| GENE 20 20092 - 21762 2017 556 aa, chain - ## HITS:1 COG:CAC3169 KEGG:ns NR:ns ## COG: CAC3169 COG0028 # Protein_GI_number: 15896417 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Clostridium acetobutylicum # 1 553 1 552 554 585 52.0 1e-167 MKMNGSQILIQALIDQGVDTIFGYPGGSVLNIYDALYERSEDIRHIITSHEQGAAHAADG YARSTGKCGVCLATSGPGATNLVTGIATAYMDSIPMVAITGNVPNDLLGRDSFQEVNITG ITMPITKHNFIVQNVEDLAAVVRKAFVIANSGRKGPVLIDIPKDVTAAHSEYVKLPRYRI RKLPKVDDVVFEQALEVIRRAERPMIYAGGGIISSNATRELMNFSRHMDIPICCSMMGLG SVPYDYDLYMGMLGMHGTPVSNYATLNTDLIIAIGSRFSDRVAGNREEFGREAKIIHFDI DASEISKNVASDISIVGDARYILKKMIQRMPETKHDDWTGTLKDFKTKLGLPKPKPGENV DPRDLALTLHEIVGEDAIIVTDVGQHQMIMAQYYQFSRPRSWISSCGLGTMGYGMGAAIG AKVANPHRPVILVTGDGSFHMNMNEMAAAVSANIPIVVLVFNNHVLGMVRQWQTLFYDHR YSHTTIDRQTDFVKLAEAFGGKGLRIQTRHDIKGVMKEALSSRVPCIVDCWIDKDDCVYP IIPPGKSGKDIILYGN >gi|312955695|gb|AENW01000036.1| GENE 21 21775 - 22977 1509 400 aa, chain - ## HITS:1 COG:VNG2100G KEGG:ns NR:ns ## COG: VNG2100G COG1171 # Protein_GI_number: 15790940 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Halobacterium sp. NRC-1 # 1 399 87 486 495 336 43.0 6e-92 MECKDVEQAAARLQGQIHNVKVTSSRTFSEMSSCQLFLKCENRQKTGSFKVRGAFNKLAK LKEEGKTSEVIASSAGNHAQGVSYAASKLGMHATIVMPKSTPIAKVLATKGYGADVVLAG DNYDECYQEALRLQEEKGATFIHPFDDEDVIAGQGTIAYEICHDLPNVDMIVVPAGGGGL LSGISFYAKQINPRIKIVGVQAEGANAIVQSFQKQKHCAIKHVNTIADGIAVMNPGKTTV KLIQENVDEMVSVSDSEIAATILLLLEREKQVVEPAGAASLAAVLNGKINVAGKRVVCVL SGGNIDVSFIHKVVEKGLVSRGRNMKFKTLMLDVPGALEHFTHILCEQNANIIEIQYDRI QADLNLNETILHLAVEVSSKEHGEALIKVLKQKGYEITME >gi|312955695|gb|AENW01000036.1| GENE 22 23374 - 24693 1553 439 aa, chain + ## HITS:1 COG:CAC3262 KEGG:ns NR:ns ## COG: CAC3262 COG2607 # Protein_GI_number: 15896507 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Clostridium acetobutylicum # 1 434 10 425 426 262 37.0 9e-70 MYKETAKLILYRSFGDHSILSELSKIFHDFDAKTAEDAELIERIYTQIKALLDLATSYGF DENLWHNYLTFLLLMNENSFSLVSEKSPVQDGSVHHFAKNDFRVVKRLFDFDFHPIEKAL GIDCFSTISNYKAVAKKERMYNRNVSAMVQRISRSIETAADEEEIFQIITTFYQEYGVGM FGLNKAFRIRSCENGDVEFLPINNMDSVVLDDLIGYQMQKDMLRENTQAFVEGRNANNAL LYGDSGTGKSTSIKAIVNEYYKDGLRMIEIYKHQFKDLSTIISHIKNRNYRFIIYMDDLS FEEFEIEYKFLKAVIEGGVETKPDNVLIYATSNRRHLVRETWKDRNDINDDDELHHSDTM QEKLSLVARFGLSICYERPNQKNYFEIVTELAKQYPEITLSEEELQAEARKWGLGHGGNS GRAAQQLINYLSGRSGLKT >gi|312955695|gb|AENW01000036.1| GENE 23 24908 - 26347 1463 479 aa, chain - ## HITS:1 COG:no KEGG:Amet_1887 NR:ns ## KEGG: Amet_1887 # Name: not_defined # Def: peptidase S41 # Organism: A.metalliredigens # Pathway: not_defined # 92 472 138 540 550 108 25.0 5e-22 MSLIKNKTAGRIIMVVLLSLPLQGCRKGQDEVKIPWKVEQLAEQIDQTRKTEAYKLPAMP KEKSSLQKYWKALDYALENQHASSPSRTLTKKEAREDTTALFAMLKELYGCYAYFNQSDA FAQAEEAILQDIERIRELDYTAYRSCIRTHLRFLEDQHFLIDQMPLKRPMVTFTMQDTFE KRKDGFYFKDKRVTAIDEETKLETVLKEDALHAGRYVYYQKTNEQKTEVTLHFAKETVQR QKVLPLTAHPSDKAILEKEIQGVPYVHTARMFYAKREQEKADAFFKTAEKFKDSKAAILD LRGNSGGDLLVAESWYRSFSGTAKGGHMQTLLKLPLENPLLEEKFHAEDFAQSLSDLRKK EAWKQLDELHAVVERRSEKQIKNDTLLFVLQDDQTASAAEHLIDRLHSLDHVVFIGTPTA GMLRGSSFLTVYLKHSSLEVSFGNMLTQFSDSYAKEYYGIEPDIWTNDASALVEQLLTQ >gi|312955695|gb|AENW01000036.1| GENE 24 26328 - 27779 1421 483 aa, chain - ## HITS:1 COG:PA2870 KEGG:ns NR:ns ## COG: PA2870 COG2199 # Protein_GI_number: 15598066 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Pseudomonas aeruginosa # 310 476 346 518 525 98 35.0 3e-20 MNIQYDYDLVSHSTLLLSTPYLETERVLVAGNDVDVTTLKEKKAAIYKGNVTEKYENTKN AVYYDSIEEALRAVDEGICDYTYTDSYAASFYQYRDDFTHYIIYPQANSSSMKYSMGIIN SSENTLATILNKGIRTIDTSELESYIYENAQQQKPFTFMTYIQENPLKFMMLIVAAASVL LMLGYVYYRNQMKMKKQIELENTRYRYLSEIMKEVIFEYDYRSDMLRLTSEAVEIFKVPE VIEHFSSYQSEILVVDGKGNNPLYEQLMKKVDTDADVNLIFHGSSLWYHIYIKVIYDGAQ AVSAIGRVQNIHAEKMEKEQLRKISMLDSLTDILNAASVKKQIQGVLNAKSTPHALYIMD LDDFKEVNDVHGHYMGDQVLIQTATALQEVFRDSAIVGRLGGDEFVVFMKHISGREQVKE KCQLLTENLRYKRETTKLPIPTISIGVSLSRTGDDFVSLYQRADIALYDVKHQGKDNYVI DKE >gi|312955695|gb|AENW01000036.1| GENE 25 27823 - 28797 878 324 aa, chain - ## HITS:1 COG:no KEGG:Elen_0050 NR:ns ## KEGG: Elen_0050 # Name: not_defined # Def: diguanylate cyclase with extracellular sensor # Organism: E.lenta # Pathway: not_defined # 6 320 2 318 835 228 36.0 2e-58 MKQKGILACIVVMFLFLLSAVPSVQAEENKRVIRVGFPTQPGLTVKNDDGTYTGYTYDYL KEISQYTGWTYEFVEIEGDLNEQLTTMLDMLKKGDLDLLGAMSYNEGLSKIYDYPTENYG NAYSVIAVLSNDERFDEYNLTESKDFRIALDKDAENRNIAFEQFAELNGMKYKTVWCENA KEQQKAVESGKADALITVDLSIDDNFRSIAKFSPTPFYFATTKGNSALISELNRAIVSIS EVNPTLQSTLYNKYFTKSSNQLLLNSREKAYINEHPALKVLVQDGFGPLQYYNGNREIQG VANDLLKSISKKAGWRLEYIYRQL >gi|312955695|gb|AENW01000036.1| GENE 26 28880 - 29551 278 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 196 5 199 223 111 34 1e-23 MQLELQNVGYSYNGKELVLRHVNYRFEGGRIYAITGRSGAGKTTLLSLLSQLTKPTEGKI LYNGLDVSEVDQYLYRSQYAGVIFQSFNLLMHLTAVENVMLSMDIAGVKKENNRAYAMEL LEKVGLSKEESQRRILKLSGGQQQRVAIARAVSYDPSILLADEPTGNLDEDTQDEIMEIF KGLAYEEQKCIILVTHSPVVASLADEVYALTDTKKIKNRQKGV >gi|312955695|gb|AENW01000036.1| GENE 27 29563 - 30993 1239 476 aa, chain - ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 9 476 35 486 486 154 30.0 3e-37 MIGLSACLALSIREAADRERESGLSDLNNTATIRVDRQSMMEDVRKNAEETEEPDSGSMK DWMSSMKELSLEELKTYAQAKSVHDFYYTESVSLNASSIEAVSTSSDTTDTAPADTSQER GFPQQGKGIGGMQHQGDFTITGYSSYAAMTAFADGSAQLSEGVRFTEGDDALTCIIHQEL ATLNNLSIGDTITFTNPAAEKETYKVRVVGIYTSTKTADSFMGMNMMDPANQIYMSYEAL HAMVEKSTADTDTALHAQTRGTYVFENVEAYDKFEAQARKLGLSDMYTVSSEDVAAYEQS LAPLENLSTYAGYFLAVVLLVGGVILVVLNIYHIRERKYEIGVLAAIGMNKRRIALQFIC EILIVTLMAIMLGCGIGAAASVPLTNTLLQTQTVQTSAAQETDFPKEGGPQIEFGGRSKG MEKETVSYIQEISSAANGKVLLELGGIAILLTLLSAALAVLRILRYEPLNILSNRE >gi|312955695|gb|AENW01000036.1| GENE 28 31092 - 31955 1087 287 aa, chain - ## HITS:1 COG:BS_yitT KEGG:ns NR:ns ## COG: BS_yitT COG1284 # Protein_GI_number: 16078176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 16 281 12 277 280 165 32.0 1e-40 MRLKPSVRDLITVGCVIIGSLLCAININTFINAGGLFPGGFTGLTVFIQRCAEKYMNLQV PYSAVNFALNAIPAYIGYKTVGKKFTLYSCVMIVLTGVFVEILPVTNITEDILLITIFGG ILQGVALGIALRGNASSGGTDFIAMWISQRTNQPAWNYILAMNAVMLVAAGYLFGWNAAL YSIIFQFCSTQVINFVHTRYKRMTLFIVTSNPDIVIEEIQNSTHHGVTRLEGIGTYYGRP RTMLYTVVDSQNVKGLVTRIREIDQTSFVNVTKTESVEGKFYQRPIE >gi|312955695|gb|AENW01000036.1| GENE 29 32179 - 33900 1840 573 aa, chain + ## HITS:1 COG:BS_asnO KEGG:ns NR:ns ## COG: BS_asnO COG0367 # Protein_GI_number: 16078143 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Bacillus subtilis # 33 573 41 590 591 403 38.0 1e-112 MKQFLAVAALNEAVEKHCDTRRDVKIYTEGFKAVQHEAMEFSVMCDGELYQLEKLHEELR QAGFPDPSSLEEAVLYAYLLWGEKAMEHMEGAYSFIIRKGDSLFCAKDPLGLRPIYYLIK DNCIWISCRIQPLLDASDTPAVLNREGLLELFAFGPSISENQTLYKDVHALPMGSLLRIS AGKLEIKTYYKLSAHPHTDTLQETITKVHDLMSASIHAQASGAQASFLSGGLDSSLITSI AAKKNPQWRTYSLDYEGNKENFKGNMYQVSLDASFIQDMCEFCQCEHTPLMLSQQELCDL LEDAMLAREAPGMADVDSSLLWLCRKVAEKEQIILSGECSDEIFGGYPWFYRDELKDLDT FPWLRSTKERISLLHPDLQSLPYEDYIAKRYAESIQDIEYLDTDSDEDRRARIHTVLCLH WFMQTLVTRQVCMGDAAHLNIRAPFANVKLLEYVYNIPWEMKFLKQEEKGILRKAFEHEL PESVAHRKKNPFPKTHNPRYAELVSKRLQERYEDPTSPLHELFDDVKLKELIDTKGESFQ LPWYGQLMSGPQLLAYLYQIDRWIVTKHISIEK >gi|312955695|gb|AENW01000036.1| GENE 30 33924 - 34109 277 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDILAYCAVIGALFLLASIVDLLRSCLKELRQIRDMLRTSQLVELQKVMKEAGVETEEAA E >gi|312955695|gb|AENW01000036.1| GENE 31 34161 - 34667 416 168 aa, chain - ## HITS:1 COG:FN1254 KEGG:ns NR:ns ## COG: FN1254 COG0778 # Protein_GI_number: 19704589 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 158 1 160 171 74 27.0 7e-14 MELQEAITARYSCRSFTERAIDSALLKTCVETAGLAPSACNSQPWKFHIIQDPAMVALTQ PFTKHAAFIVVEEQKPVVSERIVNRMKNQEFHQVDIGIACAYLCLQAAELGLDTCMIGYF HEKKIKELLQIPDKKRIRLVIAVGYGSQQRRKTDRKTLQDILTIHESL >gi|312955695|gb|AENW01000036.1| GENE 32 34948 - 36051 499 367 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 [Phaeobacter gallaeciensis BS107] # 2 361 12 384 409 196 31 3e-49 MELYVLIFLILCVVLLFIFLFLQQRPAKSADSERVLRELNAQREDMAAMQQQFNNQLMML QTQISQLMKTDLQSLHENVEQRMSHLELTLNENLHHGYQTTTQVFGKVLQQMGRLDESQQ SIREVSASILQLQNVLNDKKTRGIFGEIELYSLLETAMGTDEHRYQKQYKLSNGTIADAV LFASEPLRMICIDSKFPLENYNRLMSADTAQEKARAHAQFVQDVKRHIRAIASKYILPQE TAEFACMFLPAEAVFSYIYASCDEVVRYSYEEKVYMVSPTTLMAYLTAIRAIYLGVQRNE HVEQIQQELKHLQVEFERFHKRYQTVGSDFERTYQDMRQLQITAGKIVKRFEEIQEVQLD KKKDSAA >gi|312955695|gb|AENW01000036.1| GENE 33 36246 - 36575 199 109 aa, chain - ## HITS:1 COG:Ta1471 KEGG:ns NR:ns ## COG: Ta1471 COG0675 # Protein_GI_number: 16082436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Thermoplasma acidophilum # 9 101 97 190 237 95 52.0 3e-20 MVKTKPSYITIEDLNISGMMKNRHLSKAVASQKFYEFRAKLGAKCREYGIELRIVDRWYA SSKFCHECGCIKKDLKLSDREYVCECGYHADRDYHASLNLRDAISYKVA >gi|312955695|gb|AENW01000036.1| GENE 34 36738 - 36911 77 57 aa, chain - ## HITS:1 COG:no KEGG:BCE_3918 NR:ns ## KEGG: BCE_3918 # Name: not_defined # Def: IS605 family transposase OrfB # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 1 56 164 220 385 65 64.0 8e-10 MSVYVEQPEQVSPQLKDIGLGIDLGVKDFAVISNGIVKKNINKTAKLKKVEKQLKRG >gi|312955695|gb|AENW01000036.1| GENE 35 37159 - 37416 194 85 aa, chain - ## HITS:1 COG:no KEGG:Pmob_0121 NR:ns ## KEGG: Pmob_0121 # Name: not_defined # Def: IS605 family transposase OrfB (EC:2.1.1.37) # Organism: P.mobilis # Pathway: not_defined # 1 85 3 87 395 119 69.0 3e-26 MLKSYKTEINLTLEQIQKINKTIGTCRFVYNFYLAHNKEVYEKEKKFISGMDFSKWLNNI YLKENPEYVWIKEVSSKSVKQSIMN >gi|312955695|gb|AENW01000036.1| GENE 36 37448 - 37639 133 63 aa, chain - ## HITS:1 COG:asr7146 KEGG:ns NR:ns ## COG: asr7146 COG2452 # Protein_GI_number: 17233163 # Func_class: L Replication, recombination and repair # Function: Predicted site-specific integrase-resolvase # Organism: Nostoc sp. PCC 7120 # 5 63 4 62 95 70 52.0 9e-13 MENKISSKDRFIRFGYDSFEKLCQKFNTRIIVANNESLSPNEELVQDIIFILHVFSCRLY GLR >gi|312955695|gb|AENW01000036.1| GENE 37 38025 - 38453 355 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915918|ref|ZP_02078126.1| ## NR: gi|160915918|ref|ZP_02078126.1| hypothetical protein EUBDOL_01941 [Eubacterium dolichum DSM 3991] # 6 140 1 136 139 119 44.0 5e-26 MGGGEMVYYLQRIDERSCLMVQENQQQARLQEPVLVILQRLCMRHGSTFEGRRAAAALNL DIHQKVPILLSEIYRDVLFPTKAMRNPDCIWINYRAVDEVRRLEKGCVVQFHDESKLSLS VDIRCIRRSMRLCERYLSFLNS >gi|312955695|gb|AENW01000036.1| GENE 38 38574 - 39041 659 155 aa, chain - ## HITS:1 COG:SP1567 KEGG:ns NR:ns ## COG: SP1567 COG0251 # Protein_GI_number: 15901410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Streptococcus pneumoniae TIGR4 # 6 125 3 122 126 145 56.0 3e-35 MNVFLKAVKPANAPKALGPYSPAVKLGDFVYLSGQIPLNPETGEVEGTTIEEQTHQVMKN IKAVLADMGLDYKHIVKTTIFVSDLNDFDKLNEVYGSYLEEPYPARSCVQVARLPKDVKV EIECIVIDTLVYEQQMAAQESGCSGCGGGCDGGCC >gi|312955695|gb|AENW01000036.1| GENE 39 39052 - 40326 1307 424 aa, chain - ## HITS:1 COG:UU072 KEGG:ns NR:ns ## COG: UU072 COG1253 # Protein_GI_number: 13357628 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Ureaplasma urealyticum # 18 401 33 423 442 177 31.0 5e-44 MDGSQICLLIVLLILVAFSALFSSTETAYSSVNMIRLKQMAKNGDKRARTAYSISKNFTA AITTILIGNNVVNILATSIATELFTQMFGSAGVAVATGIMTVLILTFGEITPKIVAKAKA ESVALFMAKPLSIMVLLFRPISFVVESIEAHWEKKMEIENVTATEDELLEIVSTIEQEGV LEQEERELIESVIEFDDKNVRDIMVPKDQVVFLYDNATYEQMKQVLHDHKLSRLPVISYQ TTEVVGILRVRDVLDALLEDKEIVISEMMQEPVFVTQRKKLPAVLEDIQKSREHMAIVEE SLTSHVFVGIVTLEDVLEELVGEIYDEYDPLPNHVVEIGHHTFTIDGNVSLVDFFDTYVE DQDAPKTKARTFAAWIFELNNHRKVRKGREIEFENFEIKVLDTKDGMAARIEMQILSQMD DDLD >gi|312955695|gb|AENW01000036.1| GENE 40 40462 - 41004 557 180 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDRNYLLVSVRREHMRDVTLCSEQMQQEHQSFAGSIVREDIRFQIVEDANPANLCSLEA VCCLGFWYMKQFEKDTCNIRMQERECRMKCFRNLVTLEIREHDTYRMPEAYEIQDDMHFS TPEGSETLIPVYRKAYHDDLLHKIAVGVSRGGKSLLRWSNNKIYLSAPVYMDYEGIVRKM >gi|312955695|gb|AENW01000036.1| GENE 41 41089 - 41334 343 81 aa, chain + ## HITS:1 COG:no KEGG:BMD_1923 NR:ns ## KEGG: BMD_1923 # Name: not_defined # Def: hypothetical protein # Organism: B.megaterium_DSM319 # Pathway: not_defined # 9 81 2 74 74 64 46.0 1e-09 MKKEKTSKKTRFVAARRNSDGTLSEFKDNNGKTYDYEQALEAVEQGMIENALPFTGRDGA RHIRGINDGDESTNLRNLKEF >gi|312955695|gb|AENW01000036.1| GENE 42 41479 - 41976 499 165 aa, chain - ## HITS:1 COG:no KEGG:TERTU_4467 NR:ns ## KEGG: TERTU_4467 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: T.turnerae # Pathway: not_defined # 2 165 17 184 188 65 26.0 5e-10 MIKTKRLSIQPFQEADCTGMVNLLCNEEIKKTFMIPDFATKSMAERLFHQFKEWSYEEAR YERGIYLGDQLIGFVNTVDAEKSCIELGYVIHPAHHNHGYATEMLQAVIADLFEKGYHEI CAGAFQENTASCRVMEKCGMKRIQKTAEVDYRGHLHTCVYYRIRK >gi|312955695|gb|AENW01000036.1| GENE 43 41973 - 42566 558 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401529|ref|ZP_06645672.1| ## NR: gi|293401529|ref|ZP_06645672.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 191 1 190 192 114 39.0 4e-24 MIEWLDQFVDTRAKRRHLLYLIALSSCILLVLPYLFLGLRLLQLSDYPSVFALLKEPLIS QTYVSRIILDTISLASFSFTKAITVLLKELRPFEVVTALLFLLVFPAVEKKRSTTVVLSA ALLAAGGIFFCTWQGLSSTSLAQAVVYIRCIGGILCVLGGVLLCFLFYYTRRQLKSYYLA LQIRVEELEEQETGGSL >gi|312955695|gb|AENW01000036.1| GENE 44 42563 - 43072 497 169 aa, chain - ## HITS:1 COG:BS_cspR KEGG:ns NR:ns ## COG: BS_cspR COG0219 # Protein_GI_number: 16077958 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Bacillus subtilis # 2 155 6 159 160 169 48.0 2e-42 MLHLVLYEPEIPQNTGNMMRTCMATGTRLHLIQPLGFSLDEQHLKRAGMDYVKELEYTIY KSWEEFTQQNPSDNYYYMTRYGKKAPSQFDFTKCEGDIYFILGKESTGIPKTILSRQLEH CMRLPMVANARSLNLSNCAAIILYEALRQLDYPGLSGVEVIKGEDWLTT >gi|312955695|gb|AENW01000036.1| GENE 45 43074 - 43661 346 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 1 188 1 191 197 137 40 2e-31 MKEIMLASANAHKAQEFEEMLRPLGYTVKTLLDLKEDIEIEETGTTFEENALIKAKAIHE RLGIEVIADDSGLAVNALDGAPGIYSARFMGRDTSYDVKNQYLIDQCRHAEDKGCQFICA IAYVQADGSEHVFTGVVEGIVADHMEGAKGFGYDPIFYYPPYGTTLANVSEEQKNRVSHR GRALAKLVAFMEKEK >gi|312955695|gb|AENW01000036.1| GENE 46 43658 - 45331 1720 557 aa, chain - ## HITS:1 COG:BH2952_1 KEGG:ns NR:ns ## COG: BH2952_1 COG1032 # Protein_GI_number: 15615514 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Bacillus halodurans # 3 439 2 442 457 282 37.0 1e-75 MKKVLLTTCNAKYIHKNLALRWLYTTAPHKECVTIREYTIKEQEEWIAQDILSVQPEVVC FSCYIWNIQLIRRVIVLLKQQNSNLHILVGGPEVSYESYDLLDEGVDAISIGEGEQSVWE YITMLEEAKAYPVSGIYTKQYPNTEYRKTDLAWLERFEAPYFMEMDEAGMDRQYFYLETS RGCPYGCTYCLSSADRAVRMFSMEYIMRILHKLKDSRVTQVKLLDRTFNADPKRALQIAR YMNEYCTHQIFQFEIVAETLSEELLQFFCEEAVPGRFRFEIGVQSFHTRTLHAVGRTQNN ERLIEVIQRLKASGAVMHVDLIAGLPYEDLNLFQVSFDTLFSLQASELQLGILKLLKGTK LRSQRESYHFVFQENAPYDVRASAWLKEEEMQRIHACAEAVEKFWNSAACRSVITAILKL HWYESAFALFMDLGQEYEKLPRPYQPYELFRCFYPLLNTQDERLVDAILLMQYYRNFKQK PHRFTRPWVTLEKKKELLSFALKQGIANQDTLFRYGVADIGYCGEAGYQLVLYNRHQQYP RQWFINEKITEIKEMTR >gi|312955695|gb|AENW01000036.1| GENE 47 45402 - 46232 757 276 aa, chain + ## HITS:1 COG:FN1237_2 KEGG:ns NR:ns ## COG: FN1237_2 COG0510 # Protein_GI_number: 19704572 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Fusobacterium nucleatum # 25 247 1 231 268 116 29.0 4e-26 MKAMDFLDTLFFDPDITIRDMHKGLTNQNFLLEMNQETYVLRIPRADSEHIVNRHHETMA LEAVRDADIDVETIYYDEASGYKVTRYLPDARTYRECEDPCKLERTAALMKRFHSLQKRV DADFEPIRRLQGYRNRLRQPLYDLTPYEDAIQAVYHLNNPRILCHNDWVDGNILFTKDKT YLIDFEYAANNDPLFDVMSFLSENQIEDPALRERFYAVYFNEMNATVRRQLDIWENFQNL LWCCWAMMMWESRHESVYRAIARDKYEALKRKNPNT >gi|312955695|gb|AENW01000036.1| GENE 48 46324 - 47658 1170 444 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916246|ref|ZP_02078453.1| ## NR: gi|160916246|ref|ZP_02078453.1| hypothetical protein EUBDOL_02273 [Eubacterium dolichum DSM 3991] # 2 442 4 448 451 311 38.0 5e-83 MLEIKKLLRKRKLWIAMVCVLLCGVLSAVDLNEKAATEHRALYADALEAENKVKHQLFML MTDDNAAYFKTLTQKSERLKSAIQNKDWRAVNKNYAEVNLLHARRVSALYATRNFDLYYR EYVTKEDTLEALRKERKLPEFSDREISEDWANSYMDNDETQMFPYYQFTARFYDQLEKQG IATLTYSTTDSATLIVQFMRSLFPILPVILITLLCFDSIHEDRDSGVIKTLLSQPRKRIC YLHQKIRTNLAALCAIFFIPLLLLSLCFGIFDHYERMQAPVLSNVQGLTSLEQMENTLAE TEENNAMTYTLGITRYFSIPYQTQSPNSKFDFLPMWQFTGWCVLMALLVILFCMLLNMLF NAICRNKMTSLVLTLAILLLGMGIAQPANTETWYAWLPFTYFNPVDILSGYTSYTYLNGI LTLGISCGLLYVATRWIFRKKDAA >gi|312955695|gb|AENW01000036.1| GENE 49 47658 - 47858 159 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMRIFGNSSPLFSWIPFFYLHPLEIAAQEYAANSTLCMMMCALWLPLLFVGTIHVINRSD LEGGMR >gi|312955695|gb|AENW01000036.1| GENE 50 47867 - 48877 607 336 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916245|ref|ZP_02078452.1| ## NR: gi|160916245|ref|ZP_02078452.1| hypothetical protein EUBDOL_02272 [Eubacterium dolichum DSM 3991] # 20 310 1 289 385 145 31.0 3e-33 MVSAHEAAILRIPAGQGDCMRALLYAEIRKSWKAKRFLVSVLAFLCFFAAVYAIALKKER AYGDALVMQLHYENPVADNQCQTLLFNLQRTPKEEEAPKQREEAYLRCDIQYATSSWTNM QQSPEYFDWHDTVRYAKERALGYQKLQELGLSMDMVKELGITKDTLHRDHTYYAYFLNHD IKPYTSPYEPTLLDFLMQIVQQDTMLLLLLVVGVLMADQICHDFESGTYKLIYSMPISRG TLLIAKLLTASFVILLSFTIALLLFSILPLLQHGLGSMQYPYIVRSYEVSTWSSLMIKAV PLSMLVVLCYIVRQHGWHLGRRRCPIRCCVSAPFCL >gi|312955695|gb|AENW01000036.1| GENE 51 48861 - 50027 733 388 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916245|ref|ZP_02078452.1| ## NR: gi|160916245|ref|ZP_02078452.1| hypothetical protein EUBDOL_02272 [Eubacterium dolichum DSM 3991] # 1 384 1 381 385 187 31.0 1e-45 MKKIILAELRKSWRGKRVLVAFAAFLCFFSVVYVNCLQKGKAYEDDLIMQLHYQNAIVST RCGDLMYTLQNTPVEKENPGQREEAYGWCNVTDNVSSWTYLRQAPEYFDWHNTNAYAIGR AETLLALMDRGYYHDELKGYGITKKTLETDRAYYRYFEAQDIPPYTTPYEPNLLNFILQM FQHDTMLLLIVVVSLLMADQICHDYDSDTYKAIYSQPISRKKLIIAKVSAAAAVILLTLP AALAVFSVVPLSAYGMGSSAYPYIVHTYDVVSWTWLLQRILPFSLLVILFYMTVAALLAS WQKTISNTMLCIGSLLILIYFLIRIFGYSIPLFSWIPFFYIYPMEIAAHDFTLDLLPCTI LCIAGSLVFFLLHIFIIEKRDLEGGVRS >gi|312955695|gb|AENW01000036.1| GENE 52 50024 - 50917 1077 297 aa, chain - ## HITS:1 COG:lin0750 KEGG:ns NR:ns ## COG: lin0750 COG1131 # Protein_GI_number: 16799824 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 5 297 7 299 301 196 38.0 4e-50 MIRAEVRNLCKSFGKHKVLKNVSFSIQDHEIVGFIGPNGAGKSTTMKCMASLIYPTSGQI IIEGHDLAKERELALQYVSAMIEAPGLFPTLSGYENLQYFARLKHVDQKRIEEIATFTRL HKSLDKRAGQYSMGMKQRLGLGIAMLGHPKFLILDEPTNGLDPRGIMELRQELRQLADDE DVSILISSHQLGEIEKVADRIICINQGEIVETPSAIHNAYIYTFYMQEKDLAEAAAIHME DAQLERVDQGIKAHFRNEKGMNAYLQELLRLHIDIMDIVKENVDIESVYREVYGDGS >gi|312955695|gb|AENW01000036.1| GENE 53 51020 - 52069 984 349 aa, chain - ## HITS:1 COG:BH1855 KEGG:ns NR:ns ## COG: BH1855 COG1609 # Protein_GI_number: 15614418 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 14 348 3 323 326 97 26.0 2e-20 MTHGKDVRSMKKATIADVAELAGVSKATVSRYLKQENVREEIAEKIRAAIEETGYVARGS KRDKANDKTAETKSEKGKHTGRVKQKNYRLGVLVKDIALPRTRNIIHALKDVLKEQGITF SICVTDGMEELEEKYLTSYIIQNVNGIIIEGCSSAEFIQKQMRTTSIPVLFLNEDKEQLN CCCLHEVQAGEVLGAYMLKKQQLVVRYLGVDQMIADQRLQGIRNCYHEKRQPIDLKVILC TGSYADIYEKIKEIFTEKIDLLLLERDEMAIPLTKFAREYHIAIPQNASVISFGGHEICR VMSPALHALAYDYTAYARDIAAHMNALIEKTAVKEQTAAFSIFEGESVR >gi|312955695|gb|AENW01000036.1| GENE 54 52093 - 52971 845 292 aa, chain - ## HITS:1 COG:lin0668 KEGG:ns NR:ns ## COG: lin0668 COG0561 # Protein_GI_number: 16799743 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 282 1 285 288 155 34.0 8e-38 MIKLVACDLDGTLLDENHQLSQRNIQAIQRLHKAGINFMVATGRNYQSVAPMFKKEGIHC DCLLLNGALITDAYGKRLSHTPLTPGIAEAALRILEESTLPYHMYTDEGIVSSTPKQGRA MFIRHMRKQGMRDKEIHELMETSSFGRYDREIDDPFQYLMEEPIIYKLEAFGDDAQQLQS VRMQLSGMKQTSVTNSVADNIEITASDAQKGLALKKLCAKQGLHPDEVMVFGDSLNDLSM MREFRYSFAMANAEDIIKEAAGYQTLSNAAHGVAHVLEQLLEAATEKRVSNL >gi|312955695|gb|AENW01000036.1| GENE 55 53074 - 53538 536 154 aa, chain + ## HITS:1 COG:BH0948 KEGG:ns NR:ns ## COG: BH0948 COG1225 # Protein_GI_number: 15613511 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus halodurans # 1 152 1 151 154 158 50.0 3e-39 MLETGSKAIDFTLPDEHGNPVALHDFRGKKVVLYFYPKDNTPGCTKQACAFKAAYEEFKR EDIVVIGISKDSSASHMKFKEKYELPFLLLSDTELSVIQAYDVWKEKKLYGKTYMGVTRS TYVIDEEGVIIKTFEKASPANNAADILQYVKDIR >gi|312955695|gb|AENW01000036.1| GENE 56 53920 - 54453 318 177 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQALNVAAILLTGSACSVLLLQARNRLLICRIPALVIFLLLDLPLYGILLYLHADTAEAL LRRAVLGGGFAIGCIVIALLFQRRKKALLSYGGELVSVTASLQLFTLLYTGAALLYLHIV QASGLTREICMMIMEHVLLFSMVSCFLCLLEQWFQVNACSEALRQLHKSRLRIRQKK >gi|312955695|gb|AENW01000036.1| GENE 57 54441 - 56507 1652 688 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQEKKERRQHGFHPLQDIGQLFLSLYNSMKKGLRGVGVLASLLKQRVWERIEDCQLRQK NQKSRKQILRMEDEQSQQIRDILFPRNARTGQHATTIILFATFALQLISLTTTYRGARYY LLDLNPLAPFLFALVVQVLLFYFSKQAGQHAHMKPTRYMIFLMIVCISVLTSYVGIINNT ISPLNDYKNQYKEYQSSFAAAKDELRTLYGDYVSYERALNSLQNQANQLIQITDSAIASI QKKSGTLQNIQPSTSVTTSQQSDGGSSVTQTTDQKELTRALEKIADNEEKAEKLKAAIKQ LQNASSSASMKHMKKELDELSAETRQQPSQKVYTEFQNLTMSYNHLLDTLNAFLKEADAE GMKDLKTLNISLDQVIQMVGQYRKFQKLTLTDIQKLQQKHNILGSDQQAKGSTVSSLLSA FLPFRNMHQEEYQKFRIDLELQISDSYYALKEHAKVLQAMDKEAVNRIMKTLDESYQKHH SFTDITVIAFSRFTQSQAARNTALICFLIASLVDVISAILPFFWINRYNSALHGRKKHGG DPEEELLEQLYYAAASQLPVQHKDIRIYVCEVLSYLNTYIQLYQEVPFAKEDGYVMMAAR QSVEQSGYHAINAVLLTLHQLNTISIQDLHQMKIQYYSFHEDVGLLQEDYVYIMSSDLLL WLQQHLLAVLHQQRLLSEMKGEMMECKH >gi|312955695|gb|AENW01000036.1| GENE 58 56761 - 58380 1393 539 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 527 3 529 547 541 52 1e-153 MAKEVRFSKDARTAMLNGVNVLADAVRVTLGPKGRNVVLEKEYGSPLITNDGVSIAKEIE LEDKFENMGAKLVYEVANKTNDTAGDGTTTATILAQSMISNGLRQVEKGANPVLMREGIE YASKEAAKHILEKSRKVETSNDIASVAAISSGSKEVGKIIAESMEKVGRNGVISVDESNG FDTELEISEGMQYDKGYVSPYMVSDHEKMQAELENAYVLITDQKINNVQEILPVLEQVVQ TNKPLLLIADDIENEVTSTLVVNKLRGTFNVVATKAPGFGDNQKEILKDIAILTGANFYS KDLSMDLKEMKLEDLGTVKKVVVTKDNTTMIGGNGSKDAIDARVKEISAQMENCKSDYDK KRYAERLGKLSNGVAIIKVGATTESELKEKKLRIEDALNATRAAVAEGIVIGGGAALVEA YIALKDELKSDVVDVQKGIKVVMDALLAPIAQIAENAGYNAEEIVEQQKTAKENIGFDAK NGNWVDMFKEGIIDPTKVTRSALLNSASISALFLTTEAGVAAIKEKEAPVPPMPAGPMY >gi|312955695|gb|AENW01000036.1| GENE 59 58403 - 58669 395 88 aa, chain - ## HITS:1 COG:Cgl0581 KEGG:ns NR:ns ## COG: Cgl0581 COG0234 # Protein_GI_number: 19551831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Corynebacterium glutamicum # 2 87 11 102 104 68 43.0 4e-12 MLKPLHDNVILKKEKAEKETTTASGIILTDNAKNVPSYATVVAIGPDSKADIKENDKVVY KEYSGTNVKLDEEEYIIIEAEDILAVLA >gi|312955695|gb|AENW01000036.1| GENE 60 59035 - 59970 1063 311 aa, chain - ## HITS:1 COG:no KEGG:Dred_0437 NR:ns ## KEGG: Dred_0437 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: ABC transporters [PATH:drm02010] # 14 300 1 291 312 77 28.0 5e-13 MKLLKGALAAILAVSMTACSTQSSKQEEKESKKEEPIKILAPMGAPSLSLLGLYGNQNVT IDTVDGTDVLRAQLAKKDGEYDAIIAPINLGAALLSKDKSAYLLDSVVTWGNLYIIGSDE ADLQKEGMFAAFGEKAVPQKVLESSMDLSSFTPEIRYFNSANEVQAQLLSKKAAVGLLAE PAATATIAKAKEKGIELKVLKDLQKEYKAANNMEQSGYPQAALFIKKGSEEKVAAYRKEA EAFVKKADDTSIAGAVETATVEKLGIPSVQIAQKTWKRQNIRFEKATDVQKDIALFLKQF AITLKDSAYTK >gi|312955695|gb|AENW01000036.1| GENE 61 59970 - 61703 1895 577 aa, chain - ## HITS:1 COG:FN0611 KEGG:ns NR:ns ## COG: FN0611 COG0441 # Protein_GI_number: 19703946 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 2 564 43 606 620 670 58.0 0 MIDIKEHEELSRLNHSCAHMMAQAVKRLYPQAKFWVGPVISEGFYYDIDLGDEVIKEEDL AKIEKEMKKIAKDGKRIVRKEISKEEALEMFQNDPYKIDLISDLEDGTITCYQQGEFIDL CRGPHVDTVKQLKNFKLLKHSGAYWKGDASNKMLQRIYGICFPTAEELEDHLHLLEEAKK RDHKKLGRELGLFMMSEFAPGMPFFLPNGMIIRNLLENFWYEEHTKENYQFIKTPIMMSK ELWEVSGHWENYKENMYTTMVDDREFAIKPMNCPGSLLVFKNGLHSYKDLPLRMGELGQV HRHEASGALNGLFRVRTFTQDDAHIFMRPDQIESEVMQLIQFIDRVYSVFGLSYRIELST RPEKKYIGDLAIWEQSEKALADACVHAGKDYKVNPGDGAFYGPKLDFHIKDSLGREWQCG TIQLDMNLPERFDLTYVEKDGSKVRPVMLHRVIFGSIERFIGILIEHFAGHFPVWLAPQQ VSVVPVHHEKHLGYANEVHEKLCALGFRSKLDARNEKLGYRIREAQLSKIPYQLVIGDGE IENRSVTLRRAQSRESITMSLDDFIAMMEKAVKEKKL >gi|312955695|gb|AENW01000036.1| GENE 62 61696 - 62220 447 174 aa, chain - ## HITS:1 COG:CAC2739 KEGG:ns NR:ns ## COG: CAC2739 COG3981 # Protein_GI_number: 15895996 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Clostridium acetobutylicum # 56 173 62 176 176 80 38.0 2e-15 MQLVLAQVSDAEALQRYEDVCKDAEETDVLPFRLQYADMSAFLKAQTDWHIGANLPEGVV SSSLYLVRQHGEVVATLVLRHELNAYLRKFIGHIGYRVHPAYRRQGIAKEMLKQAVVLAK REYGLQAVMVSCRDDNIASKKTILHAGGCWERSYRIPETNECYDIFWIGGNEYD >gi|312955695|gb|AENW01000036.1| GENE 63 62675 - 63301 699 208 aa, chain + ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 6 192 4 194 199 94 34.0 1e-19 MRKTYGYVRVSSQDQNEARQYLELLDMGIDKKYIYMDKLSGKDFNRPAYHKLVYKKLKQG DLLVVKSIDRLGRNYNEILQEWKYITKDKKVDIKILDMPLLDTDQKKDLIGTLIGDIVLQ LLSFVAENERVNIHQRQAEGIRAAKMRGVRFGRPKIALPEDFEEIVYLWQQGELQSKEAI AISGLKYSTFYKKVKELEDGKLNSETSR >gi|312955695|gb|AENW01000036.1| GENE 64 63375 - 65279 1589 634 aa, chain - ## HITS:1 COG:no KEGG:DEFDS_1130 NR:ns ## KEGG: DEFDS_1130 # Name: not_defined # Def: hypothetical protein # Organism: D.desulfuricans_SSM1 # Pathway: not_defined # 1 597 1 543 571 167 25.0 9e-40 MKKIKRWITVCCLLFAATLIPVDAQEAFIIDDLHVSMEVHEDGGIDITETYVLNFTEAKH GFFRNIPTSYDMEWSVDGKLEKKSYYFPVSEVTCNRTCSLEGNADAVVVKLGDPDKTVYG EQKYEISYHVKTKDLDLSNHAQALYWNLASGFDTQIRHLSYDIKMPKAFDENAVFTYSGA FGETTTNLTHEVDQLHIKGETGRLLLSNESATIKVNLPNGYFIYPKPKDYSIPVSIASGI LLLAALSLFWKYGRDDEIIATVEFKAPDGLDSAGVGYVIDNTVENKDILSLIIDWANRGF IKIYDEKDGFQLEKLQDMTKENSHAYERAFFDSIFLYETIVREEGMKNEEVRRGLASAKS MLRNYFNKDPKKRIFTNTSVVLQVIMILLIGLPGLLLSFFSAKAKYEMNLFAIPYVIPSV LLMVSCIPWIIIMRKRYVMKKPTFVLVMCLMVFLNGILIAVNAVLQLLVGGSMWAVLLHA VITILLILIMIFMDKRSEQGTRWLGQILGLKDFILTCEKDRLELLAKDDPYAFFSILPYA YVLGVSDVWVKKFETIAVAAPNWYQGYDSTGVFTTMLWWNHFHYCFHDISAAATYVPAPK GGSGGGSFVGFGGGGFSGGGFSGGGFGGGGGGSW >gi|312955695|gb|AENW01000036.1| GENE 65 65445 - 65996 686 183 aa, chain - ## HITS:1 COG:AGc1138 KEGG:ns NR:ns ## COG: AGc1138 COG1704 # Protein_GI_number: 15887982 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 183 14 183 183 145 45.0 4e-35 MIMIIIAVVVVLILLWVISTYNKFVKLQNKVEEAFSTMDVYLKKRYDLIPNLVETIKGYT KHESETLERVISARNLAVNAQSLDEKIKSEKNFQSMLGPLYAISEQYPNLKADQHFTQLQ NELQNIESEIANSRKYYNAVCVKFNNLVEMFPSNLLAGMFHKTKKPLYEIEDAAQRENVK VQF >gi|312955695|gb|AENW01000036.1| GENE 66 66140 - 67372 1417 410 aa, chain - ## HITS:1 COG:BH2245 KEGG:ns NR:ns ## COG: BH2245 COG2309 # Protein_GI_number: 15614808 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Bacillus halodurans # 5 410 8 410 410 369 46.0 1e-102 MDARLQKYAKLAVRKGVNLQKGQTLIINTSVEALEMTRACVEEAYQAGAKEVLVFYKDDY VSKQHYQYQDEETLCTVRPWQIDCKLDYMKEGACILHIISDIPGILKDADAEKISKARLA MAKAGKELQSYTMMNKTQWCIVAAPNREWANLVFPEFEGEEAAVEELWDRILSAVHVEAE NDPIQEWIDLQENFARREQILNTHRFQKLHFENAGGTDLWVELVKNHLWAGGSEKTVAGV EFNPNMPTEEIFTMPKKTGVNGKVFATKPLDYNGTLIEDFWFLFQDGKVIDFGAEKGYDT LSSLVHFDEGSCYLGEVALVPYESPISKSGILFLNTLFDENASCHLALGDAYPMNVAGGV DMSEEQLKEAGANHSMTHVDFMFGSPDMKITGVCEDGCEVAVFEQGNFVF >gi|312955695|gb|AENW01000036.1| GENE 67 67377 - 68282 338 301 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 4 294 5 312 323 134 30 1e-30 MKTYIGVDLGGTNVRVAKVDETGAILQIVKEPTEIGKGVEQVVSKIISMIERIEGYEAVA GIGMGVPGPVDTKNGKMILATNLPGFEGYPIASRIEEHFHVPTFLDNDVNVAGMGEALQG AGKGKDIVYYVTISTGIGGALVVNQKVIAGRNGHAGEIANLIIDRNREKVNYLNVGAVEN EASGTAITRKGKAAFGEDAVQHAGDVFDLARKGNAKALEICDAVAYDLAVMFSQIAHVVD PEVFVVGGGVMKGKDVFFDKMENYFRNMIHKGMQTVVFMEAELDEPGIIGAAMLPMAYVK E >gi|312955695|gb|AENW01000036.1| GENE 68 68359 - 68649 251 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIFLTFVCVLFINVMSAQMQIAKLNDFHYGVVHELESSDFSPAVIDQLTHAANYDVRIEN RGVKDDLRIYQVITSGSVRMPLFHYEKTYVKESSAR >gi|312955695|gb|AENW01000036.1| GENE 69 68689 - 69087 429 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENAVRISVPAWVTILIITVVFSAFGGWSLSAKTYMEQESKQMENTQLHINQMLLEHSFP QILAQNQRIPQGSSYQIREHVRAIDHMDGDISEKLEFYGQVNPMKKGVYTVRCVVRNSLG MKSVKHIQVLVD >gi|312955695|gb|AENW01000036.1| GENE 70 69330 - 70022 524 230 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237733196|ref|ZP_04563677.1| ## NR: gi|237733196|ref|ZP_04563677.1| predicted protein [Mollicutes bacterium D7] # 17 229 187 410 413 110 30.0 6e-23 MNQVMQWMTHDTTRYGYLLEHKEEWRYSLIRFAFMLFMGLIGVLLAVIKRSSLPVCIVCA VGFTYGGYKLPWLWLRLRHNQRCRQISDAIILWVNTIYALIGENNIYNAISLSNASAPEI LKPDLECFIQQITLDHSDKDAYLNFLSMYEIDGFRDIMMKLYEYRSLSKDKLKYEIAALT KALSRIERDKRERRYRSELFTADTLTMIMMSVPCMYMFFVSLILSQLIMS >gi|312955695|gb|AENW01000036.1| GENE 71 70023 - 70874 907 283 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237733195|ref|ZP_04563676.1| ## NR: gi|237733195|ref|ZP_04563676.1| predicted protein [Mollicutes bacterium D7] # 35 283 14 260 260 140 32.0 7e-32 MRCRSILKSILQIRIFSWIGGKELKTYSFTKKPLIETYGCAYSKRDLLLTIGGACLCVGA ICYMQRLQLLYTCVVIATLMLLLPAVISSYFIYQSEKKRFEEYCHYFEGMRMYFKVYGKL NTALKETCNLFADDSQMSVCIHRAVMEIEDSGEYAKALGYIEEFYENTYLKRLHSLLITG EKQGGDSVYYNLDLIDYDGWKNSMLMFQKKKKSAKYMFFLMTVLSFAISVYSVLAYQDAQ MQAGIIENAQYQLFTFLELEILMLLFLVVYMSLVNKKWLRRDE >gi|312955695|gb|AENW01000036.1| GENE 72 70792 - 71817 797 341 aa, chain - ## HITS:1 COG:Ta0904 KEGG:ns NR:ns ## COG: Ta0904 COG0630 # Protein_GI_number: 16081953 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Thermoplasma acidophilum # 6 289 46 315 399 65 24.0 1e-10 MAFDFGILQPFVNDAMITDIDSNGKTVYTTHVHKGKSRAALLEPGYLEQLLNRLCNSGAI NDQFNYEHPKLDGEIDGLRIHATHQSFSTSGFTLSIRKNPIELVITPKTAKKTKYCSSAV FDFLRACVIARMSVIFGGEVGTGKTQLMKTMLSMCDDQASIVLLSDIDEMRMLELYPQRN IRQYIINDIMSYTAATSCILRDNADYVCFQEVRDEAVDDLFLVLSSSARVTATLHVKDAL LMPQRMIQLSSNKNDHHLLSTIHDYIQVCITPCRVMRNGRLRRYIGQIALFWNDADRVPQ KCLLYEQREEQAIRYAMPEYFKKYFANQNIQLDWREGIENL >gi|312955695|gb|AENW01000036.1| GENE 73 71819 - 72004 242 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATPRKGQMKMENAPKIAVLVVLALVVGSIFIATSKEYSKSVSDKTVEQTNNLFNSTGAG S >gi|312955695|gb|AENW01000036.1| GENE 74 72064 - 72441 401 125 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSVIKYSILMICFSVSILLVMDINSISQRKSEMEDAAEISMRNSLKAVGIHKMYAVDES GMEAELLREFASNINSDTDYTLRIMDISRDGLLDVELTADFVHMNGVRDQRRLRKTMIIE AYDLP >gi|312955695|gb|AENW01000036.1| GENE 75 72444 - 74027 969 527 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 157 357 371 592 656 84 30.0 4e-16 MKKKHFLKMMILLILCMSIIPMNLTEMNAAALSKKDFVPKSQNEKIIGHTAMGSWNNGNF FETVTYELVGFDDEAMTMKYRFRYYITHKGNAGSYIYQKVPVGVFLDNKKVATFSSWIDK HIANKTQLCGEKTVTIKSGTHVVELRDIKDGALTVVNVTKSINIPLPSYSVKFLDDDGTV LKTQTVERYKSASAPKVSNKTDKTFTGWDKPFQNVREDLVITAQYATNTYTVNFLDWDGR VLKTQTVSHGGNASPPSSPTREGYIFQGWKGDYTNVTGNRTITASYKIRTFTVTFDSNGG SFVASQTITYGDKAGTPADPVKKNNKFMGWYTAAGVRYDFRQPVKNSMTLYAYWDEEPVI TAQDIHIFEDLYTVQEWQRIRLERAKAQDKEDGDISARLTVLKDTTNLKKQGTYELTYEV KDSAGNRSEKNIKVIVLDKRAQEDRSRKYIRSISASHIQTLHPDSYWRATTQFQRLTQSL QKTSAQAECTWHLTAEDIAKIRSFNAAHGYSTQENKAFLEEFSYLRR >gi|312955695|gb|AENW01000036.1| GENE 76 74083 - 75147 529 354 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSFFSAGLLTTLLLMGCSSTPVLKSGEIEIPVHKELDLSASCFFDSVDKADKVTVKSG NLDIQKLGTYSITIAYGNEDYKLKVKIVDKERPILKWKKKRLIFKLGSNLDKVNDAIRDN AVITDNYDKKFQSFAGLKRIPESDKEVVFDVQVKDSSGNLSEKNSLLVQFTSDGKEKSGL KQEHASAEVSIDTGKAAKKDTKKKEKKKDNKKSERASESKGADKTDTETKVQQPEQSQAS SSTSGNQSSDKPKDANPKPDSSQATSGNAAEKEPVYPPEKEKPVMTVSNFPSYLLGNSGR VFATYDEAYAWANEQVKLEGGPWYGYYMEIGQPFDGDYANAGDGTTPWTIEFFK >gi|312955695|gb|AENW01000036.1| GENE 77 75391 - 76812 1662 473 aa, chain - ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 5 469 2 468 473 465 53.0 1e-131 MLANRKTKIICTIGPASESKEMMTKLVENGMNIIRLNFSHGDFEEHGNRIRNIREVVKET GKNIAILLDTKGPEVRLGEFENGVETYEKGDMVTIVREKILGTHEKFHIQCPEIFDDVEV GGTILIDDGKMRLTILEKREGELKCRIENPGQLKSKKGCNLPGVKLSMPFISPKDDADIR FGCQMGVDYIAASFTRRKEDILAIRKILREEGKPDIQIIPKIENQEGFDNLEEILEVADG VMVARGDLGVDVSFELVPIYQKKIIKTANAMGKPVVTATHMLESMQGNPRPTRAEASDVA NAVLDGTDAIMLSGESAAGLYPIEAVQTMDRIAKAMEPTIPFRDRLKASIKTSQRTKNDA IAISVADTAMALDVAAVIAFTQSGTTARRISKFRPEAPVIAVTFDEKTQRSLAMNWGVTT VLSEVANNQNNECELARAIAKEMGIKVGETIIIVAGYPVGNGATNTMKIIEVK >gi|312955695|gb|AENW01000036.1| GENE 78 76862 - 77824 679 320 aa, chain - ## HITS:1 COG:VC2689 KEGG:ns NR:ns ## COG: VC2689 COG0205 # Protein_GI_number: 15642684 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Vibrio cholerae # 1 319 12 330 331 359 58.0 5e-99 MVKRIGVLTSGGDAPGMNAAIRAVTRVALNSGIEVFGIYDGYKGMVEGYIEPLTKASVGE IIDRGGTILGSARLPEFKDIEVRNKAVQQLKKRGIEAIVVIGGDGSYRGALALTEMGINC IGLPGTIDNDITCTDFTIGFDTALTTIVEAVDKLRDTSSSHHRCSIVEVMGNRCGDLAIW SGIACGAEIVITSSTGFEEGEVLERLRDFDLIKKKRHAIVVISEKITDVHQFAKKVSLNT GFSGRATVLGHVQRGGSPTPTDRVLASRMGEKAVDLLMQGVGGQCVSIKDNQIVSVPIEE ALNMPRESRKRLQNLFDRLV >gi|312955695|gb|AENW01000036.1| GENE 79 77882 - 78796 944 304 aa, chain - ## HITS:1 COG:BS_dnaI KEGG:ns NR:ns ## COG: BS_dnaI COG1484 # Protein_GI_number: 16079950 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Bacillus subtilis # 15 303 18 309 311 120 29.0 3e-27 MEKLSFAFTLSEEQKKKKEALVARLMKNDHVLAWLKRNGCDEDFVWKHSGKFADWTAVMD KCEGCHGLDFCRQPEKGTRVDLYLDGMLMNQISHCTYYKEQQKQYAHRCFYKQMDMLEDY LLVDVTCLSLQHEAVEYKTAVAKVIDLLMNEHPQKGLYLWGKPGAGKSWLAAGMCNYYAK QEKRVAFVNVPKLISDLKLLFHEPDAMEARLRSIRNAEVVVFDDIGGESVTAWSRDDILL PLMDARMEKRRLTIFTSNYSMEELKQRLCAAASKSSEPVAAERLLERIRALSCEIFIKGE TRRK >gi|312955695|gb|AENW01000036.1| GENE 80 78797 - 79993 1265 398 aa, chain - ## HITS:1 COG:BS_dnaB KEGG:ns NR:ns ## COG: BS_dnaB COG3611 # Protein_GI_number: 16079951 # Func_class: L Replication, recombination and repair # Function: Replication initiation/membrane attachment protein # Organism: Bacillus subtilis # 25 396 31 467 472 98 23.0 2e-20 MNRKEDKCRIEVQGEMTAERYASFTMLYVPLIGSDAAALYHTLVSIGTRNQKIRNHILIQ TISRLNMEAMEKSRHVLEQYLLVKTFYDAAKNSYLYQVFMPKDGNEFLRHEVFGRLYLKE MGKDVYEFNKLSFAKPCEDKSAYQEITIPFVNILKEDWQDVQEEDFRKLKPQQDLLHHND IPLSFNYDRFLTGLPQMVFPSSARNEKNLRIIGELATIHGIDEITMRKLVSQSMDLKTNT LNVEQLKKKVRSCKSEFHAEENKDPYRLPPVRFLQNLQHGVEVSRSDKYLIEALISDFKM KPEVVNVLIEYVLKMKNQQFPKAYVEKVASTWVRLEIDTSEKALAHIQSETEEKGSRRKP VQKKELPSWYHNQEEIKVDVEDFDEDELLQKMKKLRGE >gi|312955695|gb|AENW01000036.1| GENE 81 79998 - 80675 581 225 aa, chain - ## HITS:1 COG:BS_ytaG KEGG:ns NR:ns ## COG: BS_ytaG COG0237 # Protein_GI_number: 16079958 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Bacillus subtilis # 32 219 5 194 197 124 37.0 2e-28 MSGLRDEDQKDCRRNTGNLFLSDMPAQKMRTIGLTGVMGAGKSSVIRILQEEGITVLDCD AVNAQLLQKHEEGYTALIQMFGTDILNDEGNIMHQRMSDLIFCDPEKKRQAEGILHPLIK KRIFEELALHAKESIVVVEVPLLFEVHWEDAFDEVWVVACDEELLLSRLKLYRHISKEEA LRRLRLQLPQQEKIKRADVVFYNNSDSASLKRQICDILNMKRQLR >gi|312955695|gb|AENW01000036.1| GENE 82 80588 - 81418 809 276 aa, chain - ## HITS:1 COG:BS_mutM KEGG:ns NR:ns ## COG: BS_mutM COG0266 # Protein_GI_number: 16079960 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Bacillus subtilis # 1 276 3 278 278 230 44.0 3e-60 MPELPEVETVVRTLEHQLDRVMITGCEVFWNNIIGYPDAAIFCRDIVGKTIQGYYRHGKY MRFDLGDMEWICHMRMEGKFYVQQPQEPYDKHVHVILQLSDGRQLRYHDTRKFGKMYLYE KRADVSSYPCFKNIGYDAFDERITAEWMYHTLHKKKTALKAVLLDQRYIAGIGNIYADEI CFAMHMHPETMINHLRKKDFEELIYHIRRILNGAIRAGGTTIRSYTSQLGVDGRFQLKLK VHAKKGEACPVCGTKIKKIVVATRGTCFCPTCQRRR >gi|312955695|gb|AENW01000036.1| GENE 83 81427 - 84012 3454 861 aa, chain - ## HITS:1 COG:BH3153_2 KEGG:ns NR:ns ## COG: BH3153_2 COG0749 # Protein_GI_number: 15615715 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Bacillus halodurans # 306 861 5 569 569 468 46.0 1e-131 MKKLLLIDGNSMLFRAYYATVYGRMMKTSNGVPTNAVYGFITMINKALSMVEPDAVLVAW DAGKPTFRHETYTEYKGTRKELDQELIVQFPIAREFLDAYGMKRYECEGIEADDIIGSMA KKYPDVEIHILSSDRDLLQLIDPTTDVYLMKKGITEMEVMDEAKLKESMGIVPSQIIDLK ALMGDTADNIPGVKGIGEKTALKLLSEYETVDNVYAHIDEIKGKLKEKLETDKEKAFLSK YLATIKVDAEIPLPFADMMLKEPGEELHDFFVKYEMKSFVKETMDTREVKKEGSRTIVKQ ISPDLLQDGALVYANVDNESYYDAQLYGFAISLQDRTEYIELSDALQDTAFLEWLKEENG KAVYDAKNFYHALHKNNIPFADVTFDVMIAAFLVDGTLSDYDKLAEKYQFDRSLLKDDVF GKKGKGKLVDSDEAARYAMAQADYLQDLVAKLDTALREMEMKELFTTIEMPLTHVLYAME KEGVVTSLSTLDEIAKATSDKIDALSAKIYEIAGMEFNINSPKQLAGILYDELGLKAGKK RSTAADVLEKLASQHPMIPLLLEHRKYQKIYSTYAVGLSKHVLKDGKIHTIFNQIQTQTG RLSSSEPNLQNISVRDEEGKEIRKAFVASEGHVLLSADYSQIELRMLAHMANEEVMIDAF NHGIDIHTKTAMQIFDVEHDAVDANMRRSAKTVNFGIVYGQSDFGLSEQLGITRKEAHAF IDKYFASYPNIKNFMDTTIAFCEEHGYVKTLFNRRRYIKEISDKNYMMREFGKRAAMNAP IQGSAADLIKLAMIHIYKKMQEEQVKSRMILQIHDELIFDVWEEELEQMKTIVEEGMQHA MKLRVPLIAEANIGRTWYDAK >gi|312955695|gb|AENW01000036.1| GENE 84 84118 - 85074 1180 318 aa, chain - ## HITS:1 COG:lin1779 KEGG:ns NR:ns ## COG: lin1779 COG0803 # Protein_GI_number: 16800847 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Listeria innocua # 5 314 7 312 317 124 28.0 2e-28 MKIKLFLVSVLALFLVSGCEEKNPSIATTVYPVQYLVERIGGDDVTVSNITENTMIQRAQ IKSSFQDILKDSDALFYIGGLEPYMDLYVDDIRDTGVDMVDLATKSAIYKFERYTSTTID GITAGTEGPYYEGEEFANLDTYDADPMLWMDPVAMTSMASDIRDYLVQKYPQYKDIFDEN YDALELDLARLEADFQAIPDGKMNISFVSMTPSFGNWQKSYGIKVYPVTLSKYGALPTSD QLAAMKKRIKSDHVRYIAIEQNLSEDMEKLQQQLIDELALIPVNLNNLSSISSEDKKASK DYLTIMYDNLKALESIAS >gi|312955695|gb|AENW01000036.1| GENE 85 85187 - 85963 631 258 aa, chain - ## HITS:1 COG:BH3015 KEGG:ns NR:ns ## COG: BH3015 COG1994 # Protein_GI_number: 15615577 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Bacillus halodurans # 28 207 31 213 289 87 34.0 3e-17 MHFHKLRIRISLLWLPYLLMLPYLPVARLIGWIFIMLTIHEMAHMLCAILFHYPIERINI YPFGLAATITHIGHGSLVKEILIISAGPLMHVLFPSLFQFCVAKGILSPSFASYLHTINA SILLFNLLPIYPLDGGRLMQTFFHCFLRFRTAEYATLICSLISITAVFYFHLLQGVSAVI VLIFLILQIFLSWRSLPLTQLQFFHYRRLHPVAYDPILNESFNLYRGRRNIIKYGRGWID EKDWLRQRFGSEKNSRRP >gi|312955695|gb|AENW01000036.1| GENE 86 85950 - 86525 751 191 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400882|ref|ZP_06645027.1| ## NR: gi|293400882|ref|ZP_06645027.1| putative peptidase [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 184 1 181 192 213 58.0 6e-54 MDDLRRVRKRIRGRRFDGAGAQEQKQRPFILFRMIYHAVMLMMCICVVVLALLLNQKLNL VKMPAVIQQFHLEDLGSWLPFENWFSLKEEPVSTSPVYTLLKDDHYSNGTNQARSGYAGV VLHVQKQADKKSSVTVKQDNGAVVTYGNLNEVKVKQDDRILKEAVLGTADSYVTINALKD NEKIKVSDAFS >gi|312955695|gb|AENW01000036.1| GENE 87 86833 - 87942 1097 369 aa, chain - ## HITS:1 COG:BS_yueF KEGG:ns NR:ns ## COG: BS_yueF COG0628 # Protein_GI_number: 16080231 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus subtilis # 20 364 12 365 369 91 23.0 2e-18 MLKRFLKKIDQRFSIYTLCKVICVLLILFLLIKTQVVWGSWYRMLRSILQPFIIGFVLAY VMHPLVEFLEKKGIPKNFSIIAIWVCVLVFLIVMLVMLMPVLYDKINEFMTSMIDGVVWI SNKIKTLGNMKDFSLVNSITNNIVNILQSYDDWVPQLVSSLPGLMNTVLNVVTNVLFSII IAIYMLFDFERIKRGLRKFVHLFFKNSDIYLHEIDQNVTVYLKSLIILMLIKFIEYSAFY FMIGHQDWLIIGLLTSFGVIIPYLGGTIANSIGIITALTLPPSNIVALIIGIMILSNVDA YVISPLVHEKRSAMGPLITLFAVFAGGVIMGAVGIMVSVPAAIAIKTAIEVYEQKTDRRL YDNAVEPDV >gi|312955695|gb|AENW01000036.1| GENE 88 88203 - 88979 899 258 aa, chain - ## HITS:1 COG:BH3027 KEGG:ns NR:ns ## COG: BH3027 COG2894 # Protein_GI_number: 15615589 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Bacillus halodurans # 1 251 1 251 264 249 49.0 4e-66 MGEAIAITSGKGGVGKSSVCINMGMVLAQKGYRVCLIDVDLGLKNLDVMLGLENRVIYDL KDVMEGRCTLANAMIRDKRQDNLYLLPACKTIHIQYFHGEDLKIVVEELKNQFDYILLDT PAGIESGFIHSIACVSRAIVVTTLDVTALQDADRIIGILMKEGMEHISFIVNRMNVHHMD RGISVSLEEAKQWLSIDFLGYVFDDENMMRSNNHGKPIVLQRETQTYSCFDSIVRRMLGQ RCPLPKYRERKFLQKLFG >gi|312955695|gb|AENW01000036.1| GENE 89 88964 - 89530 451 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400885|ref|ZP_06645030.1| ## NR: gi|293400885|ref|ZP_06645030.1| putative septum site-determining protein MinC [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 188 1 188 190 186 49.0 6e-46 MVQIKIKGINDTYHIYAQYDDASAFFQQLKERLKFCQNKNGQYFEAFFHIEGLKPQHLQE LFQLCADCHTLIAGINELPQEKSRRILEQELRGGEHYRFHEPLLLLGNIRKQAFVTSSES LYVLGSVQGSVDLLHEDCVLAASHIDGNVRICDTHFQNMTSFAPCKVYYENRHLEMKEYK EERMWERQ >gi|312955695|gb|AENW01000036.1| GENE 90 89503 - 90057 587 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400886|ref|ZP_06645031.1| ## NR: gi|293400886|ref|ZP_06645031.1| putative rod shape-determining protein MreD [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 184 1 184 184 253 79.0 4e-66 MAHIVFVIICFLIDEILTVIFPNSYLINDLLFIPNLGFCAMVLTIRKFSFLDSCLFAFGC GMIYDFCFANTFLLYAIIYTVIACLLQLWSKHMTETLIESLVLCIVTIFVKDLLIYCYMN FQRITSMSLMLWAERYELMTLLANAILVMVIVFLIRIKDDYLEMKALRIRKGEKVEWFRL KSKE >gi|312955695|gb|AENW01000036.1| GENE 91 90060 - 90896 1128 278 aa, chain - ## HITS:1 COG:lin1582 KEGG:ns NR:ns ## COG: lin1582 COG1792 # Protein_GI_number: 16800650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Listeria innocua # 48 272 51 273 295 124 32.0 2e-28 MSKLNRFQKIILGVIAFFVMIGILLRSMSGSVTSNIGYDVVTMLKYALIDYPTETVKNLF SDFANLWSVNEENDRLRYELSKNPSYKAKYVNEKQKNAELEEALGIKTSDDTYKRTWAKV ILRDQATWNNEITIDKGSKEGIKAGMAVESTNGMVGKIKSVSAHTSVVKLLTSEDKLNSA SIKILLDEKKSSLGVLQSYDVKRGCYIVLLFDDSSEIKKGMQVVTSGKGGGYPSGLLIGT VDSVQALSNQTGQTIYVRPIDDFQTFSIVSVIVEKGDE >gi|312955695|gb|AENW01000036.1| GENE 92 90993 - 91682 797 229 aa, chain - ## HITS:1 COG:BH3032 KEGG:ns NR:ns ## COG: BH3032 COG2003 # Protein_GI_number: 15615594 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus halodurans # 1 224 6 229 232 192 42.0 5e-49 MKVKELNKEERPREKALQHGIAALSNRELLALVLRSGTRSMSALELADEVLRHWSSMGDL GKANMQELMGLSGIKEAKAISLLAAFELGRRIAFDEVLHAPGIHHPQDILEWVNQQIGFE QQEHFLVLFLNQKNQLISSRVMFVGTLTNASVHPREIFREAMQLGCAKILCVHNHPSGDP QPSSADISLTRSIEECGVMTAIPLMDHIIVSRNTYFSFAQKGLLQPGLS >gi|312955695|gb|AENW01000036.1| GENE 93 91679 - 92083 621 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400889|ref|ZP_06645034.1| ## NR: gi|293400889|ref|ZP_06645034.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 132 1 131 135 124 55.0 1e-27 MENKRLIMLFGILFSVVFCLMYYVLFSFTLGKANDDKRTLYMNQVGLYEKAQSVQDMQEK LEKEGLKSYTMKQDKLTAVVCGVSSDEKESQQVQQKLKALKYSYIPKDVTVENSDVVKLI DEQAYDKALERIGK >gi|312955695|gb|AENW01000036.1| GENE 94 92301 - 92894 658 197 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400893|ref|ZP_06645038.1| ## NR: gi|293400893|ref|ZP_06645038.1| microtubule-associated protein 1B [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 190 5 192 201 108 38.0 1e-22 MKKWIALLALMCLCTVSGCTKKETPRSPAETTAAFLNGIQNQDSDAVKASSDWKDFNIKA FSVDDSDYMDSVDKKLQKQTYEKMMYFEHKEGKETIQDNQATVTVKIKQYDFSKTLKSGM EQAEKKVQELSKKDVSDAETEAAIATVLFKSLQKTDVMKTTDVQIQLKKSEDVWMVSSDN AQLEKLLSANLNLLQEQ >gi|312955695|gb|AENW01000036.1| GENE 95 94008 - 94214 106 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIQVNNLEKYDTAYAGDPFAFLFSSMQFTFKKEFLMSIIKLKFILYIDQGNHKPNSQRQG TQEIEDQV >gi|312955695|gb|AENW01000036.1| GENE 96 94266 - 95012 769 248 aa, chain - ## HITS:1 COG:no KEGG:Cphy_2094 NR:ns ## KEGG: Cphy_2094 # Name: not_defined # Def: PHP family histidinol phosphatase/hydrolase # Organism: C.phytofermentans # Pathway: Histidine metabolism [PATH:cpy00340]; Metabolic pathways [PATH:cpy01100]; Biosynthesis of secondary metabolites [PATH:cpy01110] # 9 204 14 207 263 108 29.0 2e-22 MDGHITLKGNYHKDVLDAFVEQAQKTKLSQLVILEPSSMFLECASLYKEVRATYPCQQEW YQAQNICSIMDYHAFIDAMRRESFPIPVKFGICADYFTQHEILLSQMKAAYSYDCFVGCI RFIDNIAYSWDPQSKEMLWDKYNAAFLYRRHYEMMYALITSRLFDGVSGFDNIHHMQMKP GYSLQHTYNKLAMLLALQHMYVEDDARDVLSVRGSSGRLSEAFREICMAKHIRIVPCSYA ERPEEMCY Prediction of potential genes in microbial genomes Time: Sat May 14 02:31:19 2011 Seq name: gi|312955615|gb|AENW01000037.1| Clostridium sp. HGF2 contig00063, whole genome shotgun sequence Length of sequence - 75255 bp Number of predicted genes - 76, with homology - 68 Number of transcription units - 43, operones - 19 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 58 - 101 -0.3 1 1 Tu 1 . - CDS 132 - 1037 815 ## COG0583 Transcriptional regulator - Prom 1059 - 1118 5.5 + Prom 1015 - 1074 4.7 2 2 Op 1 7/0.000 + CDS 1113 - 1676 597 ## COG2059 Chromate transport protein ChrA 3 2 Op 2 . + CDS 1673 - 2224 775 ## COG2059 Chromate transport protein ChrA + Prom 2258 - 2317 2.9 4 3 Tu 1 . + CDS 2337 - 3770 1835 ## COG2195 Di- and tripeptidases + Term 4015 - 4044 -0.7 + Prom 3822 - 3881 3.4 5 4 Tu 1 . + CDS 4065 - 4889 856 ## COG0789 Predicted transcriptional regulators + Term 4935 - 4975 -0.9 + Prom 5056 - 5115 6.5 6 5 Op 1 6/0.000 + CDS 5189 - 6568 1565 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 7 5 Op 2 . + CDS 6582 - 7649 1288 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 8 5 Op 3 . + CDS 7664 - 8812 1178 ## COG0787 Alanine racemase 9 5 Op 4 . + CDS 8860 - 9897 1176 ## COG3274 Uncharacterized protein conserved in bacteria 10 5 Op 5 . + CDS 9912 - 11519 1665 ## COG2509 Uncharacterized FAD-dependent dehydrogenases + Term 11581 - 11618 2.4 - Term 11563 - 11611 11.5 11 6 Tu 1 . - CDS 11625 - 12050 372 ## EUBREC_0102 hypothetical protein - Prom 12071 - 12130 5.9 12 7 Tu 1 . - CDS 12191 - 12346 95 ## - Prom 12471 - 12530 2.5 13 8 Op 1 . - CDS 12584 - 12907 173 ## gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 14 8 Op 2 . - CDS 12928 - 13116 263 ## gi|255523538|ref|ZP_05390506.1| protein of unknown function DUF1703 - Prom 13153 - 13212 3.6 + Prom 13238 - 13297 3.6 15 9 Op 1 . + CDS 13363 - 14673 1831 ## COG0726 Predicted xylanase/chitin deacetylase + Term 14703 - 14742 4.1 + Prom 14676 - 14735 2.6 16 9 Op 2 . + CDS 14764 - 15231 581 ## COG5652 Predicted integral membrane protein + Term 15398 - 15438 2.5 + Prom 15478 - 15537 2.9 17 10 Op 1 31/0.000 + CDS 15574 - 16410 1145 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 18 10 Op 2 34/0.000 + CDS 16436 - 17215 918 ## COG0765 ABC-type amino acid transport system, permease component 19 10 Op 3 . + CDS 17208 - 17954 281 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Prom 18314 - 18373 6.2 20 11 Tu 1 . + CDS 18443 - 18628 64 ## + Term 18715 - 18746 2.5 + Prom 18806 - 18865 6.7 21 12 Op 1 . + CDS 18919 - 19773 733 ## gi|160915869|ref|ZP_02078077.1| hypothetical protein EUBDOL_01891 22 12 Op 2 . + CDS 19833 - 20339 654 ## gi|293401050|ref|ZP_06645195.1| hypothetical protein HMPREF0863_01335 + Prom 20345 - 20404 8.0 23 13 Op 1 4/0.000 + CDS 20442 - 21494 1284 ## COG0438 Glycosyltransferase 24 13 Op 2 4/0.000 + CDS 21540 - 22613 1247 ## COG0392 Predicted integral membrane protein 25 13 Op 3 . + CDS 22610 - 24589 2500 ## COG0438 Glycosyltransferase 26 13 Op 4 . + CDS 24579 - 25532 1042 ## COG3481 Predicted HD-superfamily hydrolase + Term 25597 - 25647 -0.2 + Prom 25595 - 25654 6.7 27 14 Op 1 3/0.000 + CDS 25720 - 27597 2078 ## COG3711 Transcriptional antiterminator 28 14 Op 2 . + CDS 27610 - 28656 1050 ## COG1363 Cellulase M and related proteins 29 14 Op 3 8/0.000 + CDS 28658 - 28981 495 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 30 14 Op 4 10/0.000 + CDS 28983 - 29315 475 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 29357 - 29416 5.3 31 14 Op 5 . + CDS 29472 - 30806 1749 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 30816 - 30851 7.2 32 15 Op 1 . + CDS 30907 - 31986 1536 ## COG0006 Xaa-Pro aminopeptidase 33 15 Op 2 . + CDS 31976 - 33160 1532 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 33207 - 33239 -0.0 34 16 Op 1 . - CDS 33504 - 33959 359 ## 35 16 Op 2 . - CDS 34015 - 34302 97 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain 36 17 Tu 1 . - CDS 34483 - 35046 552 ## gi|167746443|ref|ZP_02418570.1| hypothetical protein ANACAC_01153 - Prom 35093 - 35152 2.3 + Prom 34845 - 34904 3.0 37 18 Tu 1 . + CDS 34936 - 35187 122 ## - Term 35459 - 35497 5.4 38 19 Op 1 . - CDS 35522 - 35986 629 ## - Term 36003 - 36045 7.8 39 19 Op 2 . - CDS 36050 - 36490 496 ## gi|293400444|ref|ZP_06644589.1| putative lipoprotein - Prom 36546 - 36605 9.1 40 20 Tu 1 . - CDS 36650 - 37897 1240 ## gi|218282886|ref|ZP_03489034.1| hypothetical protein EUBIFOR_01620 - Prom 37921 - 37980 8.7 + Prom 37877 - 37936 6.2 41 21 Op 1 . + CDS 38048 - 39349 741 ## PROTEIN SUPPORTED gi|229200236|ref|ZP_04326798.1| SSU ribosomal protein S12P methylthiotransferase 42 21 Op 2 . + CDS 39343 - 39831 514 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Term 39968 - 40026 21.8 + Prom 40289 - 40348 7.3 43 22 Tu 1 . + CDS 40515 - 41018 320 ## PROTEIN SUPPORTED gi|229884790|ref|ZP_04504247.1| acetyltransferase, ribosomal protein N-acetylase + Prom 41091 - 41150 3.7 44 23 Op 1 . + CDS 41180 - 41893 815 ## CDR20291_0742 putative signaling protein 45 23 Op 2 . + CDS 41903 - 43111 1063 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 46 23 Op 3 . + CDS 43186 - 44076 1075 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) + Term 44094 - 44128 4.0 47 24 Tu 1 . + CDS 44671 - 45027 368 ## HM1_0304 stage 0 sporulation protein A + TRNA 45207 - 45282 88.7 # Lys CTT 0 0 48 25 Tu 1 . - CDS 45742 - 46092 212 ## + Prom 46419 - 46478 6.3 49 26 Tu 1 . + CDS 46512 - 47660 1401 ## CLH_1401 hypothetical protein 50 27 Op 1 . + CDS 47839 - 48399 355 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 51 27 Op 2 . + CDS 48425 - 48619 243 ## PROTEIN SUPPORTED gi|15900837|ref|NP_345441.1| 50S ribosomal protein L35 52 27 Op 3 . + CDS 48637 - 48999 505 ## PROTEIN SUPPORTED gi|167757064|ref|ZP_02429191.1| hypothetical protein CLORAM_02613 53 27 Op 4 1/0.125 + CDS 49013 - 49450 479 ## COG1846 Transcriptional regulators + Term 49452 - 49483 0.1 + Prom 49455 - 49514 5.0 54 28 Tu 1 . + CDS 49645 - 50952 1300 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Term 51153 - 51197 2.6 55 29 Tu 1 . - CDS 51317 - 52639 1748 ## COG4573 Predicted tagatose 6-phosphate kinase - Prom 52659 - 52718 8.4 56 30 Tu 1 . + CDS 52941 - 54263 1399 ## COG2199 FOG: GGDEF domain 57 31 Tu 1 . - CDS 54276 - 55157 252 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family - Prom 55308 - 55367 4.9 + Prom 55110 - 55169 5.8 58 32 Tu 1 . + CDS 55310 - 55690 546 ## COG2033 Desulfoferrodoxin + Term 55695 - 55746 4.2 + Prom 55694 - 55753 6.5 59 33 Tu 1 . + CDS 55976 - 56743 1074 ## COG1349 Transcriptional regulators of sugar metabolism + Term 56744 - 56778 1.0 + Prom 56758 - 56817 7.6 60 34 Op 1 11/0.000 + CDS 56874 - 59219 2741 ## COG1882 Pyruvate-formate lyase 61 34 Op 2 . + CDS 59206 - 60126 867 ## COG1180 Pyruvate-formate lyase-activating enzyme 62 34 Op 3 . + CDS 60149 - 60826 988 ## COG0176 Transaldolase 63 35 Tu 1 . - CDS 60823 - 61074 69 ## - Prom 61124 - 61183 2.0 64 36 Op 1 . - CDS 61185 - 62042 1111 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 65 36 Op 2 . - CDS 62079 - 62972 861 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 63048 - 63107 5.7 + Prom 62997 - 63056 6.3 66 37 Tu 1 . + CDS 63079 - 64272 1338 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 64365 - 64396 2.1 - Term 64586 - 64616 1.2 67 38 Op 1 . - CDS 64762 - 65055 185 ## 68 38 Op 2 . - CDS 65052 - 66059 753 ## Elen_3094 regulatory protein GntR HTH - Prom 66238 - 66297 5.4 + Prom 66292 - 66351 5.1 69 39 Tu 1 . + CDS 66426 - 67235 904 ## COG0789 Predicted transcriptional regulators + Term 67252 - 67310 2.1 + Prom 67253 - 67312 4.3 70 40 Tu 1 . + CDS 67338 - 68117 819 ## COG0784 FOG: CheY-like receiver + Term 68166 - 68222 -1.0 71 41 Tu 1 . - CDS 68210 - 68971 786 ## COG1496 Uncharacterized conserved protein - Prom 69000 - 69059 8.2 + Prom 69142 - 69201 6.7 72 42 Op 1 21/0.000 + CDS 69250 - 70266 1189 ## COG1420 Transcriptional regulator of heat shock gene 73 42 Op 2 29/0.000 + CDS 70277 - 70897 970 ## COG0576 Molecular chaperone GrpE (heat shock protein) 74 42 Op 3 . + CDS 70918 - 72732 2492 ## COG0443 Molecular chaperone + Term 72754 - 72783 0.5 75 43 Op 1 . + CDS 72788 - 73981 1123 ## COG0726 Predicted xylanase/chitin deacetylase 76 43 Op 2 . + CDS 73995 - 75110 1240 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 75118 - 75165 10.1 Predicted protein(s) >gi|312955615|gb|AENW01000037.1| GENE 1 132 - 1037 815 301 aa, chain - ## HITS:1 COG:PA3398 KEGG:ns NR:ns ## COG: PA3398 COG0583 # Protein_GI_number: 15598594 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 9 297 5 294 308 126 27.0 6e-29 MVMEVDMDIRRFRIFQAVAQEKSFTKAAQKLYMTQPAVSKAIHELEEELQLPLFERFPKK TIMTPVGEQFLQQVQQLLQLYDSMKQDAALLQEASILQIGSSITIANELLCPLMKQLQQA YPKLQIRVTVASTSAILEQLQQHAIDIAFLEGVIQQDSLIVQPLSFYQLKAVCSPDFLVH HTVDKLNTLAELPLLLREKGSAIRETFDSFMLLHDLCPQAAWTSTNSTVLMKGAQEGFGI AILPERMVRKKLKQGELCEIQLPQLKLMNVNHIVYKKHKHLNAPMRELLKLAEKQEAYQY H >gi|312955615|gb|AENW01000037.1| GENE 2 1113 - 1676 597 187 aa, chain + ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 7 173 6 170 186 84 31.0 2e-16 MKSYKDIVWLFSINVFISTFTFGGGYVVIPMIRKYYVEKKAYFDEDELMKIAAIAQSSPG AIAINMSALAGYRVKGVSGMIISCIAAILPPLVILAVVSTLYAVIQNNTVVQAVLHGMEA GVAALIVDLIVDMYALICKEKEFFFTLMTPLVCMLNYFFQINVAILIIASALLCVMRVYC KRRSVRI >gi|312955615|gb|AENW01000037.1| GENE 3 1673 - 2224 775 183 aa, chain + ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 182 1 173 176 105 37.0 6e-23 MKLLQLFFAFFRIGLFSIGGGYAIIPMIRDQVVLSNHWLSMREFTDIITISQMTPGPLAV NTSTFVGMRVAGVSGALAATIGCICMGVLISYVLYHIFQRFSSSVFFMEILKGLKAASLG LIMSAALILLAIAFFKNGDLKLSSLQPAAVAIFTIVLWISRKWKINPIALMLLSGLLGVW IYQ >gi|312955615|gb|AENW01000037.1| GENE 4 2337 - 3770 1835 477 aa, chain + ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 15 477 16 482 485 303 37.0 5e-82 MEHILNHEKAHQKYFEEMTAIPHGSYHEQAYSAYLVAFAKEHGLKWIQDELYNVIIYKDA SAGYEDHAPVLLQAHTDMVCEKNKDTDFDFEKDALKLYIEDGFLKARGTTLGADDGVGVA YMLALLSDPDAKHPPLECVFTVQEEVGLFGAMALKKEYFQAKRMINLDDGGENATCTTSA GGVNVIMQKERILVPHDGNGYQIDVFGLHGGHSGGEIDKEHGNANKLLARVLFTLNRRYG VQLSWIQGGIKDNAIPREASAAFVCQADLETVAACVQEMKTIFAKELEFSDAGVDVAVKE VACDGVLCIEDSEEVITLLMTLPNGLRHHSMSIEGLSTASSNIGVVTTQEEAIIINASLR GAMESYVDTLAMEMDALAEVFGFHSEHEARYPAWSYRADSPMRECLKAVCQKVLGKELQL VAVHGGLECGVFKAMDEDMDIVTMGPKMQDIHTPQEALDLASFDATFTLLRAYLEEL >gi|312955615|gb|AENW01000037.1| GENE 5 4065 - 4889 856 274 aa, chain + ## HITS:1 COG:AGc1709 KEGG:ns NR:ns ## COG: AGc1709 COG0789 # Protein_GI_number: 15888277 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 105 1 105 140 67 36.0 2e-11 MLTIGEFSKICKVSTKTLRYYETIDLLNPICIKAESGYRYYAIEQLKNMLFINRMKTYGF SLDEIRTLLKWEEQGESKLLQNALLSHRKVLQEQILWMQQTLHELEADVATVQKEEMIMS YLDDIDIQLVEEPEMFLLSTRRMVNMEDCAKGFISFYEPLFEKIRKGRLTICKAPLSIYH SKEYQDEGFDMEFAIPVKERVTGTRDFSPGLCIRTVCRGSYHQIPSVYARHQEWMETEGY TYRLPPYDVYITHPDEVADMEENITEIYSPIMKR >gi|312955615|gb|AENW01000037.1| GENE 6 5189 - 6568 1565 459 aa, chain + ## HITS:1 COG:BS_murF KEGG:ns NR:ns ## COG: BS_murF COG0770 # Protein_GI_number: 16077524 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Bacillus subtilis # 1 456 1 453 457 343 41.0 4e-94 MIIRSIDAIIRMLDADYIENADIEEKIQGVCIDSRKVVEGNLYIPIHGANNNGHAYVQQA IDNGARAVLWERREANPPKEIVVILVDDTTAALQQLAKAYRDQLNMKVVGVTGSNGKTST KDILASVLAKHFITQKTLGNYNNEIGVPLTLLSLSENCEAAVVEMGMENLQELSFLTQIV RPDIAIISNVGTAHLENLGTMENIARAKMEITEGLGEHGLLIYNGDQQLLRNAAIEKQIP GCIKIRTFGKDEQNDVVVHQVRQLPDGLCFSIKDQVYHLDMIGKHQAMNATAAWIAARAL GLDEEEIAQGFASVEKTGLRNELVRVNQCLILNDSYKSNPQSALAAVDTMEEFDIPYKLA VLGDMLELGETSDMIHYTLGKDISSYHLQEVLTIGDMACYIAQGARDNMEHTLVRHFTDK EELLNYLRPYMHKECMLLVKGSRGMKLDEVVDELVKEQQ >gi|312955615|gb|AENW01000037.1| GENE 7 6582 - 7649 1288 355 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 354 1 352 364 253 36.0 5e-67 MEKIKLAIIFGGKSSEYPVSLHSAGSLIHKINKEHYELIFIGISKDGKWYAYDGDVDGIE HDTWLCEEHCTPCVLSSSEGCRGFLKLHADGTFTRIEVDCIFPILHGKNGEDGTIQGLFE LSGIPYVGCGHMSSAICMDKEMAHIVMEHAGISCAPFVCVYEADDLDYRKVYEHAKETLG LPIFIKPANAGSSFGIHRMESFDGFEEAMKDAFYHDGKGKVILETTIEGFEIGVAVMGNK ELFAGSVDEIETAAPFFDYEGKYEMVDSHIYCPARISPKLFEEAREIAKKAYRAMNCKGM TRVDMFVTPEDTIILNEVNTIPGFTDTSRYPTMMKEAGIPFPELIDKLVALAMEE >gi|312955615|gb|AENW01000037.1| GENE 8 7664 - 8812 1178 382 aa, chain + ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 9 381 9 373 386 274 38.0 3e-73 MLKSNTRSWLEIDLNRISHNIKEVQKLIPSTSKIMAIVKANGYGHGDVECSRMMEQQGID FFGVSSVDEGVRLRENGIQSPILVLGYTPPVHFHYLNEASLIQTLVSKEYAEKLNAYAKE QNVVVKAHAKVDTGMSRIGIIAQDHAYHIEDIKALYRLEYLDVCGIFSHFSVSDCLDEEN CAFTNHQIALFERVLADLRAEGIDPGTTHLQNSYGILNYPNLHYDYVRPGLLWMGVTSDD ALAIRTAPQFQPIMEWKANVSLVKDIQPGVTVSYGRHFKAEVCTRVATLAVGYADGFPRS VSNQGACVLLHGRRVPIIGNICMDQMMVDITGLDGVSEGDVATLIGCDGDEVLSVDELSR LAHTINNETLCWISQRVPRIYK >gi|312955615|gb|AENW01000037.1| GENE 9 8860 - 9897 1176 345 aa, chain + ## HITS:1 COG:VCA0023 KEGG:ns NR:ns ## COG: VCA0023 COG3274 # Protein_GI_number: 15600794 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 45 248 55 246 346 62 28.0 1e-09 MERKTYYALDVAKFISAFLVVCIHTGPLLDVDATGNFILVQILARLAVPFFFVASGFLFF RKLDFKREYNDYENKAQLKHYLWRLCKIYIIWTILYLPFTYLLLKGQDGITVNSVLLYVR DFFFTGSFYHLWFLPALLVAVPVVYICLFKLGLGKTILFGFLLYLIGMAGNVYGGYLMQI PGIQSIYQAYLQVFSTTRNGLFFGVMFIAMGALFAQRTLYLKNWQVLLGFLLSAGLLFAE CFALKDNGFMHDLTSMYAMLLPCMFFLFLGLLRIHLPQSKVYKTLRVLSLLIYVMHIMFV NLLLRVWPLMNSLAVYGLVMLLTLIMSCIIIICSRKVKFLKHLYA >gi|312955615|gb|AENW01000037.1| GENE 10 9912 - 11519 1665 535 aa, chain + ## HITS:1 COG:L195271 KEGG:ns NR:ns ## COG: L195271 COG2509 # Protein_GI_number: 15673161 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Lactococcus lactis # 1 526 1 528 535 656 59.0 0 MLRIQQIKLTLSESLDQLPDKIINKLHISSEDLLSWRIYRESLDARRAKDVHFTYCIDCR VKHEEQVLRKHFKDVSRVQEYHYAYPKKGVIGLTHRPVVVGFGPAGMFAALLLAQMGYYP LVIERGQCVEDRVRSVEDFWQNGKLDPQSNVQFGEGGAGTFSDGKLTTRSKDLRVHKVLE ELVRFGAPQDILYTAHPHIGTDLLRDIVKRLREEIIALGGEVRFSSCLQDLIIEQGELRG IVVNDEEIPVDQLILSIGHSARDTYRLLHARGVTMQPKAFAIGARIEHPQTLINEAQYKT LCGHPRLSAAEYRLTHTASNGRGVYTFCMCPGGSVVPSTSMEGGVVVNGMSEHARDRENA NSALLVQIRPEDYGEHALDGIAYQEALEKKAFVLGGGAYRAPAQRVEDFLKHRASTAMGS VQPSYALGVTPCDLHEVLPAYVTSAMEEAITAMDHKLKGFAMGDAVLTGVETRSSSPVRL ERGKEDLQSLSVSGLYPCGEGAGYAGGIVSAAIDGIRCAEQIIAMFHYTKEAACD >gi|312955615|gb|AENW01000037.1| GENE 11 11625 - 12050 372 141 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0102 NR:ns ## KEGG: EUBREC_0102 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 8 133 457 584 591 84 40.0 1e-15 MLLEDLLQGNLEKFALRYQAILEDTASYYDLVNKNSYQAHWPAVRTLLLGMLMPLENSYK IISNREKGQGRFDICLESRKQDKPSFLFELKYTKDDSVNLKKLAMQGYEQILAKQYDHGL HHVIRIGLAHRGKQVELYTEK >gi|312955615|gb|AENW01000037.1| GENE 12 12191 - 12346 95 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRECDKTFKEGYEELIERGTVTALVNYEASFYEIKNTSSLWGLFAPQAGSA >gi|312955615|gb|AENW01000037.1| GENE 13 12584 - 12907 173 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224543614|ref|ZP_03684153.1| ## NR: gi|224543614|ref|ZP_03684153.1| hypothetical protein CATMIT_02824 [Catenibacterium mitsuokai DSM 15897] # 10 80 56 126 543 88 56.0 1e-16 MSRRLPAHGVLAEFFDVTKDSRDIFKDTAIIQTEYARDINSYPTIFLSFADAKGDKDNIV MQMKLQLLKEYKKNEQVLEHIDRFEKPGFDLVWMVCPIYRMALYRQL >gi|312955615|gb|AENW01000037.1| GENE 14 12928 - 13116 263 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255523538|ref|ZP_05390506.1| ## NR: gi|255523538|ref|ZP_05390506.1| protein of unknown function DUF1703 [Clostridium carboxidivorans P7] # 1 51 1 51 556 68 62.0 1e-10 MKKIPIGLKDYRKLKEENYYVVDKSLMIKEFMDRGSEVTLITRPRRFHRNIADTFGIRQE AR >gi|312955615|gb|AENW01000037.1| GENE 15 13363 - 14673 1831 436 aa, chain + ## HITS:1 COG:BH0895 KEGG:ns NR:ns ## COG: BH0895 COG0726 # Protein_GI_number: 15613458 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 198 436 25 262 264 149 36.0 9e-36 MSRRCKNIIYGIMGLIGVMVAALLIKLLFFSGLFTPLLALNGAKTMEMEVNTSFQDPGAR ARFRFSDYSDEVKVEGNLNTKKLGTYTLTYTFDKYQKTVERKVNVIDTTPPKINLKGGSS IRVFENGSFQEPGYQASDNYDGDVSKSVERKGSVNMKKQGTYTLTYTAKDASGNTTSVKR SVQVCADPTNTKLYYDHDSYDNTMEEWWFNKSKDHQRTTGAKDEKLLKKYDSYYQGPKEK VIYLTFDEGGNDITYIKQIAEVLKKNDVQATYFLTRNYIKTEADFIRQLVQDGNVIGNHS WHHYDMTTLANASSIDKFVAEITETEKTYMEVTGQPMKKVFRFPKGGSSERAMKLVKDLG YSNYFWSHAYYDYASDVSGSEALKTMMEHYHEGAIYLLHPSNKGNYEAMDTFIKNMKDLG YDFKTVDTIPSDAQEK >gi|312955615|gb|AENW01000037.1| GENE 16 14764 - 15231 581 155 aa, chain + ## HITS:1 COG:BH3707 KEGG:ns NR:ns ## COG: BH3707 COG5652 # Protein_GI_number: 15616269 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus halodurans # 12 133 11 133 146 77 37.0 9e-15 MKKKHCYAILCIIWMLVIFWFSAQVADDSQEMSDFFVHLLDAVFSLDIMRNEIIRDMTSF LVRKAAHMSEYAVLAILFGLTIREYKKEPWLLLALAATAAYAATDEFHQLFVPGRSGQLK DVLIDTAGGALGLGLLALILYLKRTRKMKETEKLS >gi|312955615|gb|AENW01000037.1| GENE 17 15574 - 16410 1145 278 aa, chain + ## HITS:1 COG:SPy0277_1 KEGG:ns NR:ns ## COG: SPy0277_1 COG0834 # Protein_GI_number: 15674455 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 275 1 265 283 143 31.0 5e-34 MKKKLVTAAFAMTLLLTGCGSSDDDKNVSKNTGKETFTVGMECNYAPFNWQTKEQTKTSV SIGGAGFCDGYDVRVARQIAKDLDREIVIKKVSWDGLQPALESGEIDAIIAGMTKDETRE NGIDFTSPYYESEMVMIVRKGDKAAKFNDIQQFKGKTIIGQKSTNYDTIIDQIKGVKHAT PKATYPEMILSLQNKEVDGITAELPVAEGAVEANKDLTIVHFAKGKGFDIDTSVSVGLKE GSRDSELFNAVQKSLDGISKETRDQWMKEARESQPKTE >gi|312955615|gb|AENW01000037.1| GENE 18 16436 - 17215 918 259 aa, chain + ## HITS:1 COG:SPy0277_2 KEGG:ns NR:ns ## COG: SPy0277_2 COG0765 # Protein_GI_number: 15674455 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 18 237 1 220 239 180 45.0 2e-45 MIVASAKPDGMFAQAWWIFQDNIPLFWYGIKITLLLAVCGTLIGLLIGLLLGGIRAVRIE ERDAPVSRIIKKILHGFVGLYVWIFRGTPMMVQALIIYHGLRPVLNWSPVTAGITIISIN TGAYMAEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIK DSSMLNVIGVIELYFQSSSVAGSLMLYVPTFIVAAILYLLLTTLATQLLSFVEGRMNMPR SSGPSSQSVPVERVSEVYE >gi|312955615|gb|AENW01000037.1| GENE 19 17208 - 17954 281 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 233 1 230 305 112 29 4e-24 MNSIIEIKHLKKHFGSLEVLNDIDFHCDKGEVITIIGSSGSGKSTLLRCINLLETPDAGE ILYHDKDILKGEININEHRTHVGMVFQSFNLFNNKSVLENCMLGQIKVLKRSKADAKEKA MLFLKKVGMESFANASAMQLSGGQKQRVAIARALCMEPEVLLFDEPTSALDPEMVGDVLD VMKDLAREGLTMIVVTHEMQFAHDISSRVVFMDKGVIAEEGTPQQLFEHPRQERTKEFLK RYRISSQS >gi|312955615|gb|AENW01000037.1| GENE 20 18443 - 18628 64 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEKEIDQEVMDMCNFRDFIEQRGIEQGLLLKAEGKVEGNVEATFLHVKNWYRESMSVQWT L >gi|312955615|gb|AENW01000037.1| GENE 21 18919 - 19773 733 284 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915869|ref|ZP_02078077.1| ## NR: gi|160915869|ref|ZP_02078077.1| hypothetical protein EUBDOL_01891 [Eubacterium dolichum DSM 3991] # 7 284 2 280 282 290 53.0 9e-77 MEKGEKMNYQKLYECLFCAVRTAGIVANMMQATIVNEGKQVEVVEDEDERHLRMREAKTR ADEIVQEILLQSLLPEYQAVLSLDVEEDTVSRTCFLKQDYDYTLVLDPIDGTLDYLHQKD TWSICSAILHEHDVRLAIVYFPKRDIMYTYVEGVGCRVYHRLKQCTAADGEVLSVQCDNT PSVVYKNSRLSQDIIQQLWERGFQVVDDSEQELGCPDAILACMRGEGLAYFSDTRNIRDI LLGAILSKLENGHAYDYAGNAARWASHGRQKEIVFSIFEKNQIF >gi|312955615|gb|AENW01000037.1| GENE 22 19833 - 20339 654 168 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401050|ref|ZP_06645195.1| ## NR: gi|293401050|ref|ZP_06645195.1| hypothetical protein HMPREF0863_01335 [Erysipelotrichaceae bacterium 5_2_54FAA] # 14 159 7 151 154 116 53.0 5e-25 MKGTEFFYEPCVDEAQTIRNMKRQLLFLKQYTASLRLHSVLYGEDCVQLQVEDELSDYLN YTRSIVQTSRNGGYVHRDPVLDAMERQRRAREKVMEQDQRAYVLLQGILQLEEQEKELLL DVYVRGLKRELVLRHQGDIVESTLNRRLRRACLHLAALLHLQVLKECS >gi|312955615|gb|AENW01000037.1| GENE 23 20442 - 21494 1284 350 aa, chain + ## HITS:1 COG:CAC3015 KEGG:ns NR:ns ## COG: CAC3015 COG0438 # Protein_GI_number: 15896267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 9 347 4 345 355 351 51.0 1e-96 MDLDKKIVINMLSSADKVEGQGVGSAYLEQVNLVKEGASDLFTVEINSGKKADIIHSHTI DPQNYLKMKNNKNANVCYVHFLPDTLNGSIQLPKALFSVFKKYVISFYKTADYLIVVNPI FMKELEKYGIAREKMIYIPNYVSKEQFHVKPVEQRNAIREQYGIKADEFVVIGVGQVQTR KGVLDFVDVAKKLPDVRFVWCGGFSFGKITDGYEELKKVVENPPANVQFPGIIPRSDMND IYNMADVLFMPSYNELFPMAILEAVNLHRPMVLRSLELYEDILFKKYQMADDNDSFAELI RRLHEDPAYYARCAADSAYISEYYSKENVLSIWKEFYTRVYEELQERKRG >gi|312955615|gb|AENW01000037.1| GENE 24 21540 - 22613 1247 357 aa, chain + ## HITS:1 COG:lin2698 KEGG:ns NR:ns ## COG: lin2698 COG0392 # Protein_GI_number: 16801759 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 44 332 45 331 357 107 28.0 5e-23 MKSSLRSYILNFVVIIGLTAVSLWFALKDNYHEIMHLISSISWYWLLIIFLWGMIYVMIL GQIIMIFARRYKKDYTYRQGLSNALVGTFFSGITPSATGGQFGQAYVFKKQGIKYSDGAS ILWADFIVYQTTMMVYVTILFLLRYTHYMTIIGPAFLGILIGYIVNVCVISILWTMALFP RVYVKLSGHAVTLLAKLHIVKNKEKTLAAWTIQVEGFTKEIKEMKHEKKIICKTVLWNVI RMTVQFSLPFFIAYALNLNLGLDKFVDCLALASFVLMTNAFIPIPGASGGTELVFVQLFK YLVGGLKASGIMILWRFSTYHIVILVGAFVFLHLKRTYDDEKYGRRKKPKDIREVDS >gi|312955615|gb|AENW01000037.1| GENE 25 22610 - 24589 2500 659 aa, chain + ## HITS:1 COG:lin2700 KEGG:ns NR:ns ## COG: lin2700 COG0438 # Protein_GI_number: 16801761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Listeria innocua # 1 372 1 359 427 249 37.0 1e-65 MRIGLFTDTYTPDINGVVSSIVTLQRELEKNGHDVYVITNHKAMTMKKEGNVLRLPGLEL KWLYGYKLSTPYHFSARDEIRKMQLDVIHVHTEFGVGMFGRIVAKYLNIPVVTTYHTMYE DYTHYVNRFEIDEVDKVTKKVVSTFSRSISDSAQAVISPSEKTKETLLKYGVKTPIYVIP TGLNFEKFHPDNIDPARVQEIRRQYGIQEDERLIVFVGRIAQEKSIEIPIEGFRYVSDTK IKLMIVGGGPQLEELQKLVQRHHLERQVIFTDKKLPEEIPAYYACADCFVSASLTETQGM TYIEALACGLPVFARYDDVLKDLVIEEDSGFLFETPQEFAEKLTDFMHRSAKERKAFSRR ALSKIVKYDSRVFYSKVLSVYYQAINDFEDAYEVIKIKTLDDYVRIYVQNDKEDQPQKLL IDLDDYFTYKIRLHTMLDRYTVAHFQRKEIVLEAYRGAIRKLRMRDYTRKEMGTWLHRQP GLSVEDVEGLLSELEEKGYINDNLYMQQKIEKMQFSLSGKGNIRRTLINKGISAEDVDEA LSGLDDEEERLRALKMAEKLMATIKDKSRKMKKQTIVQKLVSLGFDSDIARSTSERLNFE EEDDSEALNKTIAKAIRTYSRKLSGQPLKNKVLVYCMQKGFLHEDIMNHLNEMEWRDEQ >gi|312955615|gb|AENW01000037.1| GENE 26 24579 - 25532 1042 317 aa, chain + ## HITS:1 COG:BS_yhaM KEGG:ns NR:ns ## COG: BS_yhaM COG3481 # Protein_GI_number: 16078057 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Bacillus subtilis # 19 311 19 312 314 279 46.0 5e-75 MSNKIKDLYDGYKGELTALIISMNRGVTAKGAPYLSFVFQDKSGSIDAKYWNVSEELLHK FQPGMLVEMSGDVLCHQKQLQFRVQQMKELEEAADISDYVKEGPYSQQALHETIQLYIDE IENTVMKQLVCGILKDHEKDFFEYPAATRNHHDFYAGLATHVLGMLQLAEQLCHLYPMLD RDLLYSGVILHDVGKTVELSGAIVSEYTTQGKLLGHISIMQAEVLAKAEQLGLEDCEEAM LLRHMILSHHGVYEYGSPVLPMIPEAEMLHMIDNIDARMNTLHKALEPVQAGEFTQRVFA LENRSFYKSRYKNSDGK >gi|312955615|gb|AENW01000037.1| GENE 27 25720 - 27597 2078 625 aa, chain + ## HITS:1 COG:lin0425_1 KEGG:ns NR:ns ## COG: lin0425_1 COG3711 # Protein_GI_number: 16799502 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 2 492 8 508 519 139 25.0 1e-32 MREKRILEELMHADQYCSLEHFSRQLQVSTRTISNDIKYLMQDGERNGFRIHLKRRFGYY LEITAPQKFKQYMQSDEDSMAISSKERVDTIIALLLLQSDYITQETIADTLAVSKSIIKV DMAKVEKALFEHSISLIKKAHYGISLSCEGMMRKLYLLELQEKDNLYMKKTMDHYLSQQH IQHLEKRLIALLKQYRLNTNYIELKKIDLFLKVSVLLAEKGIESAGGVIDSSVHKQMAVE LADVIQEIYQVTLSSGDICDIGNYLKQKTKPSDVYLYDEGLIQDIEIFLQDADEQYHTQF NADVEFKKSLLAHVSLLLDRLHQSISFSNPLVHEISVKYPVIFNICIRFAGMLEEKYHVK TTQDEIGFIATHFAAHMEKELHHKLNLYHRIAIICSSGGGSAFLIKLKLETIFSSSNIET FSLLELDEVRSYEPDIIFTIKKLDEVFDVPIVLIKELLDDADIQKIKNMLETDASLVLQE RSFTSLFRKNAFHIFQEGSYADMVSCMAAKLEQEGYCDPGYAASVKQREEVLSTVYNNGI AIPHPLEMCGRGNILSVGIVKQEASVHKLPVQVIFLVDLEKGDLKLHQNITRVLFEVMSD TALIEKLRRAESYEDFMKCISHLKF >gi|312955615|gb|AENW01000037.1| GENE 28 27610 - 28656 1050 348 aa, chain + ## HITS:1 COG:ECs3264 KEGG:ns NR:ns ## COG: ECs3264 COG1363 # Protein_GI_number: 15832518 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli O157:H7 # 1 330 1 330 345 264 43.0 2e-70 MNIQFLEKLSNADGIASNEQEVRDVLVAELKEYADEVSTDHLGSIIFKKGNRGPKIMLCA HIDEVGFIVRSISDMGQVMLMSVGGVKPLAQFMQKVRITTEDGKKIHGIIQATYESNAAT KVYVDLGAQTAQEVYDLGIQVGDMVTYTTEFEHFALADVVAGKAFDDRLGCFIMGEVLKR LQGIDHPNTVYMVGTSSEEVGIRGAKTAVYRVNPDVVFPIDVACFNDEFVRNHTNQRQIG KGMMLTNFDRTLAPNRALIRRIKDTANTLHKPLQLDMFNGGGTDGGEAHKSRDGKPTAVS CLPVRYGHCAYSIAHLQDIADAIDIFTELIVNFDEAAYRASINFLKGV >gi|312955615|gb|AENW01000037.1| GENE 29 28658 - 28981 495 107 aa, chain + ## HITS:1 COG:STM1314 KEGG:ns NR:ns ## COG: STM1314 COG1447 # Protein_GI_number: 16764665 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Salmonella typhimurium LT2 # 3 101 16 112 115 72 47.0 2e-13 MTELEQQIIGIISAAGDSKGKAFEALRKVKESDYEGARALLEESRKIDLEAHKIQTKLIQ SEMDPEAEKPELSLLMVHAQDHYMTSQLARDVIEALVDVFEAKEGGN >gi|312955615|gb|AENW01000037.1| GENE 30 28983 - 29315 475 110 aa, chain + ## HITS:1 COG:lin0873 KEGG:ns NR:ns ## COG: lin0873 COG1440 # Protein_GI_number: 16799947 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 103 6 108 111 79 37.0 1e-15 MRILLCCAGGFSTNMLMQNMKKVVKESAKLNEEDFKFTAIPADSLEEEIDNWDVVLVGPQ VSHKIDFIEAVCKPKNVPFAVIDKDVYGQMDGATVLKLALVTRKKHEMGK >gi|312955615|gb|AENW01000037.1| GENE 31 29472 - 30806 1749 444 aa, chain + ## HITS:1 COG:lin0874 KEGG:ns NR:ns ## COG: lin0874 COG1455 # Protein_GI_number: 16799948 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 3 444 11 441 441 230 30.0 5e-60 MFNKFEAFMNKWLMPIAQKVDKQRHLSAIKASMVAMTPFTILGSFFAIIPALPNMIGENN AFSQFILNNAELLDLPVTLSIGMMSVYVTMCIAYNLGNHYKLYIPGCITLSTFAFLFVAA ENVEGGISITNFGAKGLFCAMLVGMAATELYRFCKEKNLTVRMPEGVPDFVSKSFELIPT TIIVAGTFIAVRFFSQQIFGALPPQILTQFLAPLVGSMDNPWAVLFLHFMICLIFFFGIH SSVFGPITRPIMATFIAENIIARQAGEPLPHFYTAGTSSAFFGFTGAGITIGCVVACMLS KSKRYRKIGQVALFPSLFGINEPILFGAPIILNPIMFIPFVFGGAIIGTMPMFLMHYGLL DKPFFDPPYVGVFLEGFLTNGDWRVILACGAQLILAILLYLPFFKIMERQELREEEARAK KAEEAKNIFSDDEEALLNDLDLDF >gi|312955615|gb|AENW01000037.1| GENE 32 30907 - 31986 1536 359 aa, chain + ## HITS:1 COG:lin1391 KEGG:ns NR:ns ## COG: lin1391 COG0006 # Protein_GI_number: 16800459 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 1 352 1 353 353 252 41.0 7e-67 MQRIQKIRSILEEKQIDAILIKSRSNKRYLGALTGSGVKVLVTRDELYQIMDGRYSNEAR ETTSGFIPVVHEQGNSYLDEVVRLLGSHARIGIEAGQVLVKEYLSMQEYGLKTVLLEHEL EEARRCKDAQEIALVRKACEITDAIFQETISTIRIGMKETEVSALLQYLAIKNGASAMAF DTIVASGVRGSMPHGRPSEKTFEAHEFITIDFGITYQGYQSDMTRTVCIQEPKPELKKIY DIVLEAQCAGVDFIKAGIRGNDVDSYVRGIIQGHGYGPYFTHGLGHGIGMGDGELPLLNA GSDTVLEEGMIMSCEPGIYVPGLGGVRIEDDVLIENGRGVPLNATTKELIILEGNGYEV >gi|312955615|gb|AENW01000037.1| GENE 33 31976 - 33160 1532 394 aa, chain + ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 3 386 2 377 384 306 37.0 5e-83 MKYDFDHVINRKLGKCRKWDNTILKEKFGLNEDAIPMDLADLDFECAPAIKQAMIERAAL GDYGYTYTYDAYYDALIDWNKRRFHVDIKKEWIKLTFGTCGTLHYIVQCFCNEGDAVMIN TPAYDPFAEAVERGGCRLICNSLKLENMRYYLDFEEMEHQMVEENVKLFIFCSPQNPSGR VWTKEELHQLSALCLKHDVLLVCDEIHRDVIFDRESFTTLWNAHEDIADASIMCVSPNKG FNLGGLKSSYIIVKNKQIRERLLAYLQKVYVTSPHVYAVPAIIAAYNDSEEWLDQLTAYI GENFTMVYDWFAQHMPQAKVMKSDSSFLAWIDMRSVFADEDEMRAFFIRANVSMVVGSYF VQDGYGWVRLNIGTQKSILQEALRRIAVTWEAWE >gi|312955615|gb|AENW01000037.1| GENE 34 33504 - 33959 359 151 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKQILLISLLLLLSGCSKKAEAGISKTTCRGTLMDTFIETTMDSENQRISTQSIQLHTD HRTLGYNKQQAQACVKQYQKDYANIRGLTYQASVTDKEMKQLLVLKLTDIDTAQLKKLDF IQTLEDAVFDVHTAVVVYEQQGLTCSTKPAA >gi|312955615|gb|AENW01000037.1| GENE 35 34015 - 34302 97 95 aa, chain - ## HITS:1 COG:BH2234 KEGG:ns NR:ns ## COG: BH2234 COG3706 # Protein_GI_number: 15614797 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Bacillus halodurans # 10 93 226 310 314 62 35.0 3e-10 MRTRLDPAIFICRWGGEEFVFLFHDIREQDALQQLQDFCHWMNHTEFQYGEQNIPVTMTF GICCHQRLSLDELINKADQLLYQGKQKGKHTVVSG >gi|312955615|gb|AENW01000037.1| GENE 36 34483 - 35046 552 187 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167746443|ref|ZP_02418570.1| ## NR: gi|167746443|ref|ZP_02418570.1| hypothetical protein ANACAC_01153 [Anaerostipes caccae DSM 14662] # 7 186 8 188 348 97 33.0 5e-19 MPMKLNENNYSYYIYRNLICLAILLHFGYTLLMGILHYGVPLLYNICSVLFYIGMLLLVM KKKRYALAVSLIHLETICFVVLHTVLFGWNASFFLFLIAMASLVYFCPYRSPYIPYLFSI LHMLTFFLLHEQIQGTMFSSLPAASLQLLFLCNSFGSFLTILYVAYVSNASADIGKEVLK KQNESLL >gi|312955615|gb|AENW01000037.1| GENE 37 34936 - 35187 122 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQNSHKQCIAEMQKDCQTYQIAVNIIAVIIFIKFHWHTVNLLSFHSCREASFYTALHRFV NSRKNSAVYGILLRQTPLWSLFA >gi|312955615|gb|AENW01000037.1| GENE 38 35522 - 35986 629 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLLCAAFAVAMLAGCSGGKEETKTMTCTAEQKSNGSTISQTIKFDYQGDNITKQDQKT VITAPDKKTYEAMLPTLKSASLESKAKGVEGMSYSLTEDKDKFSITESIVFDIKEIDPKD YGTFTNQKLSGKKMVMDLEKTKENIEKSGLTCKK >gi|312955615|gb|AENW01000037.1| GENE 39 36050 - 36490 496 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400444|ref|ZP_06644589.1| ## NR: gi|293400444|ref|ZP_06644589.1| putative lipoprotein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 146 1 150 150 99 47.0 5e-20 MKKLLCAAFAVLVLAGCSGGAKTETKTCSMEQSGMKMDATFTAEDDKITKTSVKVTMDLS AAGLGDTELTDDQKKQLETAVLSQLGVEEGKGVNVSAEFKDKNIIATVDVDMKDGDSATL KKLGFGGEASLSKTLEEAKDGGATCK >gi|312955615|gb|AENW01000037.1| GENE 40 36650 - 37897 1240 415 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|218282886|ref|ZP_03489034.1| ## NR: gi|218282886|ref|ZP_03489034.1| hypothetical protein EUBIFOR_01620 [Eubacterium biforme DSM 3989] # 5 310 4 307 420 70 25.0 2e-10 MYGRVEIDDETKKKLSLLLKYYRKKANLNQRDFITYNGATICSADTYSKIENCKIIKSNS IYHYLLVQIHAELNLPSSWWEPWSTCFQELLELVTRYDLAGLAERCAVLFAQLREKTDIF AVEYRELLMLMASYYEHCSEMSEEQFHKYMELLPIFDVSIQEILKDMLYTYTVHRHRDAR KNGAVFTRLHMAESTSLLNILNRSYQAYYEERFLDCFRDSLYLEQTFLKQGNYNRLLDVY DAIVLLYADVQKDAANHEYVEKLFAIVNEHPEQLHRNKYLQSLYQCGMLYYEIGQYEKAC DYFCELAKQDDYHFLPAALLACTLCEKLERVIPPEILQEPRYPERFPKHVTAYHQYCRFK QKERDPFQREEYFLKYVLPQISNEDQLIWEPACRELEQLIRSTRHYHLKKRIQSS >gi|312955615|gb|AENW01000037.1| GENE 41 38048 - 39349 741 433 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229200236|ref|ZP_04326798.1| SSU ribosomal protein S12P methylthiotransferase [Pedobacter heparinus DSM 2366] # 21 429 1 406 410 290 37 2e-77 MKIGFISLGCSKNLVDSEKMMGMINSGGHELVHNADEAEAIIINTCGFINSAKEEAIQTI FQMAEYKKHRCRKLIVVGCLAQRYKEQLEQDIPEIDAVISIREYPHLHELLPKLLDGHDL VSYDKCERKVSSKPWTAYLKIAEGCSNHCTYCAIPLIRGDNVSFPIEQLVEEAKQLAQRG VRELVVIAQDTTKYGVDLYGRRALLDLLQQLHEIEGFHWIRILYMYPDEIDARLIEGMAK LPKVLPYFDIPMQHASNRMLQLMNRRGSREEVAALVKKIRETFSYPTLRTTFIVGFPTEE EADFSELMQFVEDIHWDRMGAFPYSPEEDTPAYSMDGAVDEDVKEARLAQLMKRQEEISL ENQRRMVGEIIEVLVEDQEGLTGVYRGRGASSAPDEVDGIVMFKSERFIEFGSFVKVRIT VALPHDFKGVEVC >gi|312955615|gb|AENW01000037.1| GENE 42 39343 - 39831 514 162 aa, chain + ## HITS:1 COG:RSc0991 KEGG:ns NR:ns ## COG: RSc0991 COG3663 # Protein_GI_number: 17545710 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Ralstonia solanacearum # 3 155 10 163 166 103 37.0 1e-22 MLKGFDPIIPEKPRLMILGSMPSVTSLDKQEYYGFAHNRFWKILHAVFEMPIDTYAQKKE ILFQQHILLWDVIGECEREGSLDSAIRKERVNDIAHLTAVYPTLHRVICNGRKAYELYQK HFPDIALPCSYLPSTSNANRSIREEVLFAQWKQALMEHEGDM >gi|312955615|gb|AENW01000037.1| GENE 43 40515 - 41018 320 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229884790|ref|ZP_04504247.1| acetyltransferase, ribosomal protein N-acetylase [Sebaldella termitidis ATCC 33386] # 13 164 15 165 169 127 42 1e-28 MELRICSCDADIRALAALATEIWHEYFTAIISKEQIDYMVEKFQSYPALKKAIEEENYTY FLAYEEGAMIGFCGVKPEKDRLFLSKLYLHKKARGKGLSSILLKRAISFAREQDKKAIYL TCNKFNQHSLDVYRAKGFKDIDSVQTDIGQGFIMDDYILQLELDDGK >gi|312955615|gb|AENW01000037.1| GENE 44 41180 - 41893 815 237 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_0742 NR:ns ## KEGG: CDR20291_0742 # Name: not_defined # Def: putative signaling protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 234 1 233 642 130 32.0 6e-29 MEWDISIECVSVIMLNIIMVYSWKGNLLPSRKNQAFRACLLITYLSILTNILSTLLLTQL SASTYLINQVLLHLNYMSTPLMGVVYFIYTLTTVFEQDADKLKKHILFAGIPALFYLLCL LSNPLTHLLFTLDPIAGYVRGSWVSLTYIVFYIYVLFSVFFTISKRRNLDTAVFIILNFF PVLSAAVILFQLLYPNYILTGTAATSALLIIYLYLQNKQLFTDPLTGILNRQEFNRL >gi|312955615|gb|AENW01000037.1| GENE 45 41903 - 43111 1063 402 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 9 388 373 754 776 177 29.0 4e-44 MKDTDPYSMMVLSLKGFRFINDHFSQKAGDVLLTRICAFLEKELPAVRVFRFSGDEFAIV CKDAETCRQCHTQLIARMRQSWSVENFDFRIQYGIGILHVEAHNRDKDEIIKGLEYAVML AKRSEENRTCVCTADMIERLHRNERVLELLRQCIREDSFIVVYQPIYDVKEQAYTKAEAL LRLPPHDLGQLGPDEFIPLAEENGLITEITYQVLRKTCLFLQQLQHTATTLKSISVNFSA VMFLQQDLGNNILKIIEEYKIPVHMLQIEITESMLSRDYHMIIAFIQRMRKQGIEFLLDD FGTGYSNISNVLSLPIQTIKIDKSLLWKAMVSTEGAVVLRKMCEAFHEVHQLLLVEGVEN EEQAAFVRDCACRYIQGYYYAAPLPQEQVYKLLIQKQKEMSG >gi|312955615|gb|AENW01000037.1| GENE 46 43186 - 44076 1075 296 aa, chain + ## HITS:1 COG:CAC1876_1 KEGG:ns NR:ns ## COG: CAC1876_1 COG3757 # Protein_GI_number: 15895151 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Clostridium acetobutylicum # 5 190 32 208 215 67 24.0 3e-11 MRRLGIDVSEHNGILDWDAIKKGGIEFAIIRSSWGHFEEDKQFRRNVRECEHVKMPYGLY HYSYVANDAQMREEASGFIRLCKTCKPSYPCYIDMEDADGWKRRNGVSDAMNVETCYYTC RELEKAGFYAGIYANLDWLTNHINSSRLDRFDKWVAQWASVNTYRKPYGMWQFTSDGSIH GYNGRMDLDYAYKDYPAIMKEKGLNGYGKAPDQPKPDPKPNPSKNPKYKVGTPVTYTGLW TQANGGNWYPRRLLAVKEGIITRIIKGAEHPYLINDGTGWTNDHAIDDEPTRPSGY >gi|312955615|gb|AENW01000037.1| GENE 47 44671 - 45027 368 118 aa, chain + ## HITS:1 COG:no KEGG:HM1_0304 NR:ns ## KEGG: HM1_0304 # Name: spo0A # Def: stage 0 sporulation protein A # Organism: H.modesticaldum # Pathway: Two-component system [PATH:hmo02020] # 6 118 145 260 260 68 32.0 8e-11 MNGIVNLNTRVSELLNRMGVPDYTAGYSFLHTAIMSVYEQPDLLGSIIKCLYVVVANKHK TTVAHVEEELEHVLLATLLSGDRVMLQKVLHTLHYRQPTLREFIEMSLKYIRSAEQVG >gi|312955615|gb|AENW01000037.1| GENE 48 45742 - 46092 212 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTGALTVEAMEANGSPVNAAAVRVYGRTEDTSTFIMCCYTDENGLSEPIFLPAPNSIHSM QSNPQVCPYAAYDVHVTKDDYDKEVINGVQIFPDTTSSLRVIMQCCNGRPPKTNTI >gi|312955615|gb|AENW01000037.1| GENE 49 46512 - 47660 1401 382 aa, chain + ## HITS:1 COG:no KEGG:CLH_1401 NR:ns ## KEGG: CLH_1401 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 2 379 7 392 395 201 29.0 5e-50 MVFRRKKHKNTAEESIDFHALVLEQLEHMCEEGQILDDAFVLEAQDIYIYADVVSVEHNV AQIVFQLHHEWLDDAILESVAASGSNAQEAVTLACEDFYRHTLQLYLRALQGKAEETVFG FTQLRHYFQVYRNEIHGIGKREGLIEQDFWEMLKQKLQLRLGNKKAYWIKVFASKTRSKV LCEVRINGREDSELSELLLPYAQNWDCIGSYHTEKQNFLLIQEERSYEPSDFTGDNIRQY TRKAIKWYEKCGSKEEHRKLREQLIRLCKDDSLAYEIFSFVPEIYCKYAYPKVEYGARLF LIQKDQKTRELYQSQLQSFSYIEETVMEHLKRDHVNRSIVENVISFSANARAIQKAMDNG DALDELMIPGICYYARNDYIMR >gi|312955615|gb|AENW01000037.1| GENE 50 47839 - 48399 355 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 30 186 2 159 159 141 43 1e-32 MATLEVSIINKKVIPNNVNDDLVNEKIRFKEVMVIDANGDKLGIKMRREALEIAYRQELD LLCVAPKGQPPVCKVLDYGRYRFEQQKKAKEAKKKQHVTEIKPIRLSPVIDKHDFDTKMR HARKWIEDGMKVKVDMRFRGRLITRLEVGKKIMNSFTEEISDIAIIEKRPILEGNTMSCV LAPKKK >gi|312955615|gb|AENW01000037.1| GENE 51 48425 - 48619 243 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900837|ref|NP_345441.1| 50S ribosomal protein L35 [Streptococcus pneumoniae TIGR4] # 1 64 1 64 66 98 71 1e-19 MPKMKSHRGLAKRVKQTGSGKLKRSHAYTSHRFHGKTQKQKRHLRKSGTVHSTDYKRIKE MLVK >gi|312955615|gb|AENW01000037.1| GENE 52 48637 - 48999 505 120 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167757064|ref|ZP_02429191.1| hypothetical protein CLORAM_02613 [Clostridium ramosum DSM 1402] # 1 119 1 119 119 199 81 5e-50 MARVKGGYTTRQRRKKVLKLAKGYYGAKHILYKTAHEQVMHSFKYAYNDRKDLKRNMRKL WIARINAAARMNEISYSKLMHGLKLANVTINRKMLSEIAIHDPKGFTKIVETAKSALEKA >gi|312955615|gb|AENW01000037.1| GENE 53 49013 - 49450 479 145 aa, chain + ## HITS:1 COG:CAC3579 KEGG:ns NR:ns ## COG: CAC3579 COG1846 # Protein_GI_number: 15896813 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 145 1 146 154 96 42.0 1e-20 MDDTRHTLNELLVDLFNYILLIEEKNLRDQGVKLSMTEVHILEAIEKSESNMMSAIAKRL MVTQGTLTVSTSKLVKKGYVERVKDERDKRIVRLKLTEKAVSILDIHNRFHEEMIERLLN ELELDKEVELIQSLRNLMEFFKGKY >gi|312955615|gb|AENW01000037.1| GENE 54 49645 - 50952 1300 435 aa, chain + ## HITS:1 COG:PA3339_1 KEGG:ns NR:ns ## COG: PA3339_1 COG1752 # Protein_GI_number: 15598535 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pseudomonas aeruginosa # 2 192 24 222 308 72 30.0 2e-12 MKRALVLGGGGSKGAYELGVWRALDELGISFDIVTGTSIGAMIGAMYVQKQFERCLELWE QLSVDDIIANGVNLDMDIELLMSQKGKYKTLLKSYVKNRGADITPFVNKLQHYFDAERFF SSDIEYACMCVNVTKKQPQPVYRRDMSRDTALDYIIASASCFPAFPMKEIEGEHFVDGGY YDNVPIELARSMGAQQIVAVDLKSVGKRKIHRPQKDVIYIEPQVSLGSFLLFDQVRIHHN MERGYQDTLKKFDCCLGSIYTFSLQDKAHIIAFEERIHMQLEQIDDLVDRRYMSRLVKKA FHHQMIASFSHFQEYDWPFLRMLEMTALAFQIDDIGIWSFPKFAEQVLACAQKHVSIAER ADRDSLHLLDAAASLKEQSTKEIICSIYYYMRTAGAASRKELEAVALLMNDSFVMAYLLF ALEQLADKGKGYRFS >gi|312955615|gb|AENW01000037.1| GENE 55 51317 - 52639 1748 440 aa, chain - ## HITS:1 COG:YPO0832 KEGG:ns NR:ns ## COG: YPO0832 COG4573 # Protein_GI_number: 16121140 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Yersinia pestis # 5 435 2 424 432 370 48.0 1e-102 MPQANPLKQIVVKQKEGKPVGIYSCCSANDYVIEAALECVKRDDSCVLIEATANQVDQNG GYTGMTPKDFREFVLKKAKAIGVDESRIFLGGDHLGPLTFAALPEKEAMEKAEELVRCYV AAGFTKIHIDTSMKVADDDPNIRLSDAVIAKRGAHLARICEETYQELLKQNPNAVRPVYI VGSEVPIPGGAQEEGAGMQVTRVEDFKATVKTFEEAFAAEGLKETWKDVMGVVVQPGVEE KDDGCTEYDRSKARDLMASIKEYPNLIFEGHSTDYQTKFKLRELIEDGVGILKVGPGLTY AMREALFALANIETAVYHGKEEALSNFIDVLEEAMMEEPKNWKKHYHGDDNALWFKRKYS FSDRSRYYMPNPNVAAAKDKLIANLRKSGIPLSVLSQFMPIQYTKVREGHLENDPEALIR DRIINTIDEYLYATHQETLF >gi|312955615|gb|AENW01000037.1| GENE 56 52941 - 54263 1399 440 aa, chain + ## HITS:1 COG:aq_035_2 KEGG:ns NR:ns ## COG: aq_035_2 COG2199 # Protein_GI_number: 15605636 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 270 440 76 246 251 111 34.0 3e-24 MMFDEQEQFLLHQIRILLKQLDERQTKQKDEEKPENKDDRYRTLLQLSCKNIWEFDPLTQ MVSITCQDGRVIINSFRMLMQGVNAQDHKRIKEAVHRIMLGESEKEYFSYQRECRSGEIR FYEVGAHAYWVNGNLHIIGVTRSVRAMEERIERVLHEQEKFDLLLSMANMYIWEYDVGKR EFSANQSLCDKLGLPMRSYTVEQLNELLQIHQMPVLLERIERKALSEHAVIHLKNIQTSF DLIFETNFKGLPDKNGNIKVVLGTMNDITEKELLKTSASRDPLIGCFNRRSGDMTLVSTF QKFQNGEDFYTIIFFDVDDFKKVNDRYGHDMGDYVLRHVCEQIEKEIRSSDMLFRWGGDE FLLICSGISKENIYAYIERLRRLIESSDFIFDGNRVQVTLSIGAAYYYKSDHDYQDALKR ADRSVYKAKLAGRNKVCVLK >gi|312955615|gb|AENW01000037.1| GENE 57 54276 - 55157 252 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 31 287 29 283 287 101 31 1e-20 MKIELKNNILQLRGISFADTDAVFAYFHTAKKKRYEYYQTNRVSINNRIIHGNHMLQEQD TVRIFLAMEEDTIEPWYEDLEILFEDELFCIVNKPANLLVHSDGIEHAHTVCNLVKAHYL LEGHNTCVRPLHRLDYETSGAMIFCKVPFLQPLLDAMLKNKQIYREYEAFARGYIAQKHC TITRGIARDRHDARKMRISEHGKSARTDVFVKQNFMDFTWIRCRLYTGRTHQIRVHLAAI QHPLLSDPLYGIRDSRCPRLALHACRVSIPHPLSNDMLRVECPLPQDLRQLLD >gi|312955615|gb|AENW01000037.1| GENE 58 55310 - 55690 546 126 aa, chain + ## HITS:1 COG:MTH757 KEGG:ns NR:ns ## COG: MTH757 COG2033 # Protein_GI_number: 15678782 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Methanothermobacter thermautotrophicus # 2 120 6 123 124 107 45.0 8e-24 MKLLKCSVCGNIVEMIEDKGVPVMCCGKPMDELKANTTDGALEKHVPVAEIADGNLHVKV GSMEHPMLAEHYITMILVEAGDNIMRKNLKPGEKPEGVFPLGDYKGKVHVYEYCNLHGLW KTDIEA >gi|312955615|gb|AENW01000037.1| GENE 59 55976 - 56743 1074 255 aa, chain + ## HITS:1 COG:CAC0113 KEGG:ns NR:ns ## COG: CAC0113 COG1349 # Protein_GI_number: 15893409 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 1 233 1 234 253 178 41.0 1e-44 MFVEERQSAIMEELHANGKVKVKELSERFSVSEDLIRKDLSALEAKGLLKKAYGGAVLIR ENIHRKIAAQRKDVNQEEKRGIAKAAVDLIQEGDVVFLDISTVNIRVARELVEREKQATI VTNMLEVVSILADSSLPVIFIGGEFDYGRDGFVGSLAMEQIMKFRFDISFLGVVGIDVHD NSVYTYMANDGATKRAILSSSKQAFMVCESDKFMQIGNYRYAGADEFTGIITDHKLDREN EKLMKNMQLCIQLAE >gi|312955615|gb|AENW01000037.1| GENE 60 56874 - 59219 2741 781 aa, chain + ## HITS:1 COG:STM4114 KEGG:ns NR:ns ## COG: STM4114 COG1882 # Protein_GI_number: 16767379 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Salmonella typhimurium LT2 # 6 779 2 764 765 600 42.0 1e-171 MELKKTARIDLLKERMLSQPRYVSMEQAMIITRAYQRHEQEPVILKRAYALHDALCELEI GIEPQELIVGNRTKGVRYGVVFPESGISWVDQELETLPTRPQDKFLVRPEDVQTFREVIK PYWKGKSLEDVLKKRYGKEISALSTVVKINQKDHAQGHICPNVREWLEKGPAGLKEEAQQ HLLDCKEEQRPFYESILLVMDGVCRFLMRYHDELQKEAKQHPDWKQDMIETAEICKALSK RPAETFHEAVQSMWILFVVLHMESNASSFSPGRLDEILYPYYRKDRELGRLDAQRALDII ECLWLKFNQIVYLRNKNSAKYFAGFPIGFNIAVGGQDVHGEDVCNELSFLFLLAQEHIGL PQPNLSVRLHRGTGDALLKKAVRVVAKGSGMPQFFNDEAIIAELEKLGISHQDAMDYAIV GCVELTTQGNNLGWSDAAMFNLNKVLELTLHHGRCLLTNQQLGPDLGGLDTYESYEELES AFDAMIDHFLQRMIPACEEVEKAHIDILPSPFLSSVIDDCMEQGMDVTRGGAHYNLSGIQ MIQVANLADSLAAIKALVYDRKSVTGEALQYALEHNFAHDEMLRQRLLNKVDKYGNDVEW VDMLGAKWASAFRDKLRSFTNYRKGPYHTGMYTVSAHVPMGEHVGASADGRLAGTPLADG GMSAVYGRDLHGPTAVLKSVSRLSCDCTTNGGLLNMKFLPEFFQNEQGIDKFAGFLRTFV DLRIPHIQFNVVRKEDLLAAQKHPEQYASLTVRVAGYTAYFVELAQELQNEIIARTSYEG I >gi|312955615|gb|AENW01000037.1| GENE 61 59206 - 60126 867 306 aa, chain + ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 1 278 1 273 302 177 34.0 2e-44 MKASSGYVFDIKRFATHDGEGIRTTIFLKGCPLRCAWCQNPEGLHPVLQLLYMETKCMHC GSCAAAAIHGGVSMQDGRIKLVRDAVEDWEGLIDICPTGALRYDASCYDVSDILREVKKD RAFFRYGGGVTLSGGEPLLQADFALEILKACKAEGIHTTIETSLYAPQDTLRQLLPYLDH IYADLKIFDSAVHKAYTGVENAQILDNIRYLLCTEELRDRVIIRTPLIPEMTARSENITA IAQFLQQCYKGVRYELLNYNPLAKAKYDYLDMEYCFDENPKLYTKEAMESFYRIARDQGI RNLIIE >gi|312955615|gb|AENW01000037.1| GENE 62 60149 - 60826 988 225 aa, chain + ## HITS:1 COG:ECs0903 KEGG:ns NR:ns ## COG: ECs0903 COG0176 # Protein_GI_number: 15830157 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 213 25 236 244 156 40.0 4e-38 MKILIDNADIQEIKKAYEYFPITGVTCNPTILKKTGRNPYDVLKEIREFIGADGDLHVQV VSAKAEDMVVEAHKIQEVLGKNTYIKIPVVREGLKAMKLLHAEGANITGTAIYNQMQGYL AGMAGAAYVAPYVNRIDNLGYNGVQVAKDIHDMLKHAGLKTEVIAASFKNSQQVLELAKY GLGASTIAPDVIEGLIKVDAAVLAVDAFTRDFEELCGEGNTMLNI >gi|312955615|gb|AENW01000037.1| GENE 63 60823 - 61074 69 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYIVLTHFYGYVKNFLEFVVAYMTVMHYSPDAMEQCKQSICILFIFIRAFEVWQKNTLSL HLSACFFIIYANQMCSTLQMGAF >gi|312955615|gb|AENW01000037.1| GENE 64 61185 - 62042 1111 285 aa, chain - ## HITS:1 COG:CAC3342 KEGG:ns NR:ns ## COG: CAC3342 COG2084 # Protein_GI_number: 15896585 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Clostridium acetobutylicum # 2 284 7 289 292 287 51.0 1e-77 MKIAWIGCGVMGTSMLLNLKKGGHTVSAYNRTYEKAAPLLEQGIRVECTIRDCVSDADVV CTMVGYPKDVEEIYEGDDGIFAHAKAHAVLIDFTTSSPALAKKLYTAAKAKGYAMLDAPV SGGDSGAKAASLSIMTGGDEEVFEQMRPLFSLLGTGIQYMGEAGSGQHTKACNQIAVAGA VAAMSEALVYARAVGLDEQKMLTAIAKGAAGSWQIDNTAPRVLANDFAPGFYIKHFIKDM HIVQQEMEQQDVHLDMLEAVCNMYEALAGMGEENNGTQALVHYYK >gi|312955615|gb|AENW01000037.1| GENE 65 62079 - 62972 861 297 aa, chain - ## HITS:1 COG:BS_ylbJ KEGG:ns NR:ns ## COG: BS_ylbJ COG3314 # Protein_GI_number: 16078567 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 23 292 29 342 408 73 24.0 4e-13 MKKFTGFLLFGLLLLTLGFGTLTLQSAQNALSIWFEKLVPSMFLSMVLVRLLYKEHAFDH LPSLGLPALLGMDQGAWNLVLCTMFLGFPTGSVFVDEAVRDGVLSRQDAARLLYCCCFPT PGFVIISCGIVFFKSLHIGMLLFALQLLSGLLLLLFTRRHTVHTFPAAVASSQSFMRNLS SAVTESGISLYMIGGYLMLFMSVTAVLFSFLPEFPALIIRSLAEFSSGIVLINVTPFSTM QRLLLTSFLLGFAGFCVHMQIMSMVEQVPLRYPVFLLYRILQGMISVLLLILCVQFL >gi|312955615|gb|AENW01000037.1| GENE 66 63079 - 64272 1338 397 aa, chain + ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 1 389 11 401 403 298 40.0 1e-80 MINYLAKKMIHNYNELEDPAVRKAYGNLTSTVGIANNVILFLFKFLAGTLARSVSITADA VNNLSDAGSSVISLLSFKLSSKPADEKHPFGHARYECIASMIVAVAILLLGFELIRTSFH KILQPEAVSFSWLSVIILLFSISVKLWMYSYNKKYGRLLKSSIMEATAADSISDVMATGA VLVSTVLSPIIHFNLDGYMGVVVAIFILMAGGGIIKSALDELLGQAPDEDLVKQIQDKIN SYDGVLGMHDLMIHDYGAHRTFASVHVEVDYKEDVLKSHDMIDNIERDFQENMGLEMVIH MDPINIDDPLTNELRTLTAAIVKEIDEDLSMHDFRIVPGETHTNMIFDVVVPFHIKMSNQ QILDALAQRIRERKGDHYYLVVTFDRAYTTHHSQESA >gi|312955615|gb|AENW01000037.1| GENE 67 64762 - 65055 185 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILPKANLKQILQEFRSILSWGFYFTLLQLDEQLVDLYYKRCEEAVGFLVKRDADGYCRC IQQVYMQLFHIIIHCAKRIGIRQCDAIQLPDIDSLPL >gi|312955615|gb|AENW01000037.1| GENE 68 65052 - 66059 753 335 aa, chain - ## HITS:1 COG:no KEGG:Elen_3094 NR:ns ## KEGG: Elen_3094 # Name: not_defined # Def: regulatory protein GntR HTH # Organism: E.lenta # Pathway: not_defined # 190 294 247 352 486 78 37.0 4e-13 MRDAGYISLEARKRAQVIWQPSQAHDEQTDFYILHTHRQMIDVLESMRLCLPPLCSGLCD LLQEKDIRHLYKMLSTLEDNKNLEKRRLLIRDFNVYLLQRYHNDMILDLYLTTFSYIEYP LLYHTDLFSSYHGTLKHDYEQLLAAYTDKNRRFVYDFYDHTICYTIQRIREHAAQIQLCG NHCIPEAAPFFWQPKHSHDYVYTLVFRDIIRSIACKTYADQQLLPPIEQLSRTYQVSYAT IRKVLKQLNDIGLAKTYNGLGTRIQLNKGVAQAHLEDSTMIRDAVKFIGAVQFITITIGR CCLEYFDQLLVLAPVMEERIKKGIMMASVSLMPCW >gi|312955615|gb|AENW01000037.1| GENE 69 66426 - 67235 904 269 aa, chain + ## HITS:1 COG:MA0989_1 KEGG:ns NR:ns ## COG: MA0989_1 COG0789 # Protein_GI_number: 20089866 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 4 101 8 108 124 63 38.0 6e-10 MYKIGEAARLLGLSTEALRYYERKGLIVPHKDSVSNYRYFDASQINHLLNMQKYQKLGFT LYELMDLFESRGNDMFLELMEQKEKELLQESVSMSLRLHSIHLSLECIALAERAQHAIQF VTRPALYRISYMQDDVILADDASLNEELRMWSKSSELQFLSARICAKDFISGQEHFDYGF CMYETIGDFIGIRINDVVRQYAECPALAYCFEADAQHTILQEKEKLLQFMEAQHLMLDGD ILSQVLYSACENHHYQMRHMIWVPYKRVI >gi|312955615|gb|AENW01000037.1| GENE 70 67338 - 68117 819 259 aa, chain + ## HITS:1 COG:BS_spo0A_1 KEGG:ns NR:ns ## COG: BS_spo0A_1 COG0784 # Protein_GI_number: 16079478 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Bacillus subtilis # 5 117 6 119 120 62 29.0 8e-10 MKSLIFLVDENRNQLSALERAISSVEEFELAGMTSDGEECIRQLEGKHVHVLVLDMILPK KDGFYVLEEIRSRRLQVDHIICISSYLSEMILSEFNRYCVDYIMMKPYEIPDLIRKIHFI RNYQPDYSLNEELQKKLGRSQNQHLEGTITELLHELGVPANLKGYQYLRCAIMQTYRDMD LLGKVTKTLYPKIAMEFQTTPSRVERGIRHAIEVAWNRGNAHVIHKIFGYTISMERSKPT NSEFIAMLSDKIHMEETRV >gi|312955615|gb|AENW01000037.1| GENE 71 68210 - 68971 786 253 aa, chain - ## HITS:1 COG:BS_ylmD KEGG:ns NR:ns ## COG: BS_ylmD COG1496 # Protein_GI_number: 16078601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 11 250 29 273 278 144 31.0 1e-34 MNYIQWNYEDDLLAGTTLRDSSLPENNNMALHACLRKEDVLNNRDTLSKALHIASSQWTF AMQTHSDHIHEVTAADAGRGYRVYEEGIADCDALYTKEKNIAIGVFHADCVPVLLYDPFT GIIAAIHSGWQGTVQEITRKTVTLLMQKEHVDPAHLMAYIGPAIAYRSFEIQQDVIDRIR AMSFDTRDYLTMLPNGRAIADNKGLNMQMLLNLGVERDHITVNPNDTFLKNDAFFSYRRE PACGRHLSFILRK >gi|312955615|gb|AENW01000037.1| GENE 72 69250 - 70266 1189 338 aa, chain + ## HITS:1 COG:BS_hrcA KEGG:ns NR:ns ## COG: BS_hrcA COG1420 # Protein_GI_number: 16079603 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Bacillus subtilis # 1 333 1 341 343 245 38.0 7e-65 MLTKRQTAIFKTIVDEFTRTAEPVGSKKLMDLLDFNCSSATIRNEMAALEDLGLLEKTHT SSGRIPSSRGYRFYVENLMERELDDGVKHSLQAVFQERHYSMDEIVKKSCDILSQMTSLT SVVLGPESRYQTLQHIQLFPLSDTSAVAVFITDHGHTENKTFHFNTAVSVEDIKTCCNLL NDKLSGTPINEVVERMQQIEPLLASHIARHEVLFEAFVNAFMRFATDHVYCSGQSNMLYQ PEFADIEKLKELMKMLEDSSLFRQLANHEGDVAIEIGGDNELIQVNNVAVVSSKFKLNED EEGELMIVGPTRMQYSRVVALMEYMSKVIEDLYRSENR >gi|312955615|gb|AENW01000037.1| GENE 73 70277 - 70897 970 206 aa, chain + ## HITS:1 COG:SA1410 KEGG:ns NR:ns ## COG: SA1410 COG0576 # Protein_GI_number: 15927161 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Staphylococcus aureus N315 # 2 206 4 208 208 94 32.0 9e-20 MQEEKEVVNEEAKAAEQSEEAKTEQDAAKAEKKDAKEAEKEDKKSAKFGKKKKIEELEEE IVKLKEEAAANKNAYFKAYADTENLKKRLQSESDNVRKYRIQSFAMEILPVLDNLERALD VKVDDQNVKNYAKGFEMIYQQLVHILNQEGVKEIEALDKPFDPNFHQALMQEAKDGVESG MVIEVLQKGYMLKDRVLRATLVKVSE >gi|312955615|gb|AENW01000037.1| GENE 74 70918 - 72732 2492 604 aa, chain + ## HITS:1 COG:BS_dnaK KEGG:ns NR:ns ## COG: BS_dnaK COG0443 # Protein_GI_number: 16079601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Bacillus subtilis # 1 602 1 603 611 738 69.0 0 MSKIIGIDLGTTNSCVSVMDGGECKVITNPEGNRTTPSVVAYKNGERIVGDAAKRQVVTN KNTISSIKRLMGTNEKVELEGKQYTPQEVSAMILQYLKSYAEDYLGEKIEKAVITVPAYF NDSQRQATKDAGKIAGLEVERIINEPTAAALAYGIDKTEKEQKVLVYDLGGGTFDVSILE LADGTFEVLSTNGDTKLGGDDFDNVVVDWMVDTFKKENGVDLRKDTMAMQRLKEAGEKAK KDLSGVVQTQISLPFISAGADGPLHFEATLTRAKFDEMTKSLVERTMEPVRNALRDAGLT KNDIHQVLLVGGSTRIPAVQEAVKSVLGKEPNKSVNPDEVVAMGAAIQGGVIAGDVKDVL LLDVTPLSLGIETMGGVMTVLIPRNTTIPTSKSQVFSTAADNQPAVDIRVLQGERPMAND NKELGMFKLDGIAPARRGVPQIEVTFDIDVNGIVHVSAKDKGTGKEQSITIQNTSGLSDE EIDRMVREAEEHKAEDEKRKEEIDLRNRAEGFIAQIDSMLADNGDKIDAKQKEETQKLRD DLQKSLDENDMDAVKEKLEALEKAAQAASAQMYQQQSADPNAGAGANNANNDDNVVDAEF EEKK >gi|312955615|gb|AENW01000037.1| GENE 75 72788 - 73981 1123 397 aa, chain + ## HITS:1 COG:ECs0134 KEGG:ns NR:ns ## COG: ECs0134 COG0726 # Protein_GI_number: 15829388 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 14 383 14 391 409 120 26.0 6e-27 MLAIDWMYPKQEQTAAVDVSSHYAQTVRVEKETPLFEKKDGEYREIGRIFKGTVLKFDKQ GAQNMKEKYFRLQTDDCYILTDHVVPEQTEENSVKKASVYLPFNENIVTRDSYVIQNEAG NKLAEVTRKASYPIYVKDEDRYGVQLGNALVYIPKYAVAATRHADNTSEPIAKQIPVFMY HYFYSKENGEVSKNGNWLEVNDFEAQLKYLKEHNYVTLRMQDVENFLDGKVQLPKNSVSI TIDDGTASIYKYAYPLLKKYGDSATLFLIGNHLKDDKLPQSFQEMKQNGMELQSHSYGMH TGGCEGGHGGALRCVAHDEGVTDTEKSFSIIGGGNVYCYPYGDVTDSALQIMKDAGVHMA FTTNYGKIEPGMDKLQLPRVRIFGDADIQQFIYSLES >gi|312955615|gb|AENW01000037.1| GENE 76 73995 - 75110 1240 371 aa, chain + ## HITS:1 COG:lin1509 KEGG:ns NR:ns ## COG: lin1509 COG0484 # Protein_GI_number: 16800577 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Listeria innocua # 1 371 1 374 376 321 50.0 1e-87 MSKRDYYEVLGLSKGASDDEIKRAYRKMAKKYHPDVNKDPGAEESFKEVNEAYEVLSDPQ KKATYDQFGHAGMDGANFGGGAGGFGGFEDFGDIFGSFFGGGFGGGGNRRASNGPRKGND RFMQMRIEFMDAIFGKTETVTIEVDEQCDECMGSGAKSKSDIKSCPHCNGTGTVTTQQRT PFGVFQSQSVCPDCNGTGKTIVNKCPKCHGKGYEHKRVKLDIKIPAGIQSGQQVRVPNKG ERGVNGGPNGDLYIEILVSRHKQFVRDGNDIRITVPISAVDAILGCKVDVPTVYGDVELT IPAGTQFGQQFRLKGKGVKSASSRGGQGDQYVEVKVEVPTKITRDEKELYEKIRNKKSHE SPFDKFKKAFK Prediction of potential genes in microbial genomes Time: Sat May 14 02:33:33 2011 Seq name: gi|312955573|gb|AENW01000038.1| Clostridium sp. HGF2 contig00045, whole genome shotgun sequence Length of sequence - 33888 bp Number of predicted genes - 37, with homology - 32 Number of transcription units - 20, operones - 10 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 191 - 1447 1034 ## 2 1 Op 2 . - CDS 1444 - 1782 378 ## Dhaf_1678 transcriptional regulator, PadR-like family - Prom 1818 - 1877 7.2 + Prom 2067 - 2126 6.3 3 2 Tu 1 . + CDS 2155 - 2448 318 ## + Prom 2451 - 2510 5.3 4 3 Tu 1 . + CDS 2646 - 2909 277 ## GYMC10_2256 hypothetical protein 5 4 Op 1 . + CDS 3017 - 3367 281 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 6 4 Op 2 . + CDS 3310 - 3666 324 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 3679 - 3708 -0.9 - Term 3662 - 3700 4.5 7 5 Op 1 . - CDS 3717 - 4181 721 ## 8 5 Op 2 . - CDS 4186 - 5223 1335 ## gi|293401495|ref|ZP_06645638.1| hypothetical protein HMPREF0863_01778 9 5 Op 3 . - CDS 5210 - 5539 481 ## COG1695 Predicted transcriptional regulators - Prom 5612 - 5671 5.4 - Term 5619 - 5691 14.0 10 6 Op 1 . - CDS 5718 - 7034 936 ## CD2753 putative signaling protein 11 6 Op 2 . - CDS 7036 - 8601 1374 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Prom 8644 - 8703 8.2 - Term 8739 - 8772 -0.3 12 7 Tu 1 . - CDS 8773 - 9285 524 ## COG0756 dUTPase - Prom 9306 - 9365 6.2 - Term 9427 - 9475 11.4 13 8 Op 1 35/0.000 - CDS 9516 - 11351 235 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 14 8 Op 2 . - CDS 11317 - 13131 2095 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 13151 - 13210 2.6 - Term 13146 - 13180 2.2 15 9 Op 1 . - CDS 13225 - 13482 325 ## Nther_0742 hypothetical protein 16 9 Op 2 . - CDS 13511 - 13972 491 ## COG4769 Predicted membrane protein 17 9 Op 3 . - CDS 14005 - 14385 417 ## gi|293401486|ref|ZP_06645629.1| conserved hypothetical protein - Prom 14460 - 14519 2.8 - Term 14472 - 14520 8.0 18 10 Op 1 . - CDS 14528 - 14947 626 ## CTC01832 hypothetical protein 19 10 Op 2 . - CDS 14999 - 16171 1223 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) - Prom 16200 - 16259 5.1 - Term 16609 - 16645 2.6 20 11 Tu 1 . - CDS 16660 - 17082 621 ## gi|293401483|ref|ZP_06645626.1| conserved hypothetical protein - Prom 17156 - 17215 4.4 21 12 Tu 1 . - CDS 17237 - 18718 2001 ## COG0554 Glycerol kinase - Prom 18741 - 18800 4.4 22 13 Op 1 36/0.000 - CDS 18927 - 21512 2372 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 23 13 Op 2 4/0.000 - CDS 21509 - 22195 321 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 24 13 Op 3 40/0.000 - CDS 22251 - 23255 957 ## COG0642 Signal transduction histidine kinase 25 13 Op 4 . - CDS 23245 - 23934 815 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 23956 - 24015 7.3 26 14 Tu 1 . - CDS 24843 - 25538 637 ## BDI_2733 hypothetical protein - Prom 25655 - 25714 4.3 + Prom 25755 - 25814 3.5 27 15 Tu 1 . + CDS 25879 - 26319 410 ## Ccel_2418 hypothetical protein + Term 26332 - 26392 6.8 - Term 26329 - 26368 3.0 28 16 Op 1 . - CDS 26393 - 27244 1030 ## COG4978 Transcriptional regulator, effector-binding domain/component 29 16 Op 2 45/0.000 - CDS 27262 - 28002 756 ## COG0842 ABC-type multidrug transport system, permease component 30 16 Op 3 . - CDS 27999 - 28718 311 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 28769 - 28828 4.5 31 17 Op 1 . - CDS 28898 - 29308 326 ## Clos_1272 hypothetical protein 32 17 Op 2 . - CDS 29378 - 30016 614 ## 33 17 Op 3 8/0.000 - CDS 30013 - 30870 291 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 34 17 Op 4 . - CDS 30886 - 31260 396 ## COG1725 Predicted transcriptional regulators - Prom 31298 - 31357 8.4 35 18 Tu 1 . - CDS 31633 - 32355 577 ## COG4422 Bacteriophage protein gp37 - Prom 32424 - 32483 3.7 36 19 Tu 1 . - CDS 32494 - 32898 463 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 32931 - 32990 7.2 37 20 Tu 1 . - CDS 33285 - 33455 91 ## - Prom 33600 - 33659 6.9 Predicted protein(s) >gi|312955573|gb|AENW01000038.1| GENE 1 191 - 1447 1034 418 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRRKKHVWLIVYPFEYPALQAYLNDMAEKGWKLVSLKGDRSCWLTFEADASQKEYYLVD YTKDYSMIIPDSETADAHKYRTFVEEFGYTFVGSNGPLMVYRCDDPNLTLREGTQEDRRI MNVSMHKTAVWLFISWALYVLLLLQSYHGLLWSMYADGSQFQNFLLMAALNITWLIHLLP YFIWLVRRRNMTSSKMLLRQSRIVYGSVVLLICMLIGSLFTVNVLYVIAFTVIFLVFGWL IYRFWKTRYPMGFKVIGSIALLWVTFAIGVNITLTSTYDSLSFQKPMEQTRLSDFVLQHV NTAGLTLDSYSESSMLSEHMSFSAYSEKEDAADKNLYIDWYRIRDGFFRDWTKRRYQSEN GMEQMCRGYGEPIKTQGVTMYKGEYEVLFIRDDTYVCINDDFLLDDDGWKLIHELLNL >gi|312955573|gb|AENW01000038.1| GENE 2 1444 - 1782 378 112 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_1678 NR:ns ## KEGG: Dhaf_1678 # Name: not_defined # Def: transcriptional regulator, PadR-like family # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 102 1 102 106 81 45.0 8e-15 MPKKQLETLTEPMYYTLIALLQARCGMEITEFVLKLTRGRVHLVPGTLYTMLSKFENEDM IRETESDGRKRFYLITEKGKEMLMQEYRRLKTMLQDGEVWIEKQSDEKEAAS >gi|312955573|gb|AENW01000038.1| GENE 3 2155 - 2448 318 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRLKSIPGKWMLTIMLALLLTTCYFVLNSRVYLLEQKDQLVQQEQKLIAQEEAGIPIRT QHVSPASVHVGAAYLWIIPFGILEVCFLILYIVRYLA >gi|312955573|gb|AENW01000038.1| GENE 4 2646 - 2909 277 87 aa, chain + ## HITS:1 COG:no KEGG:GYMC10_2256 NR:ns ## KEGG: GYMC10_2256 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 1 87 1 88 89 93 54.0 2e-18 MKYVNAHTILPKDLVEELQKYIQAGYIYIPAAGKKKRWGEHSGYRTELQLRNEGIRQRYV SGCTIEELSTQYALSAHAIKKIIYQKS >gi|312955573|gb|AENW01000038.1| GENE 5 3017 - 3367 281 116 aa, chain + ## HITS:1 COG:CAC0777 KEGG:ns NR:ns ## COG: CAC0777 COG0110 # Protein_GI_number: 15894064 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Clostridium acetobutylicum # 2 114 5 117 210 156 63.0 9e-39 MNKHLIYPRSGDPNTVYIKNVITRPEITAGDFSMYNDHAQDPRDFEKHNVLYQYPANCDQ LIIGKFCSIACGAKFLLNSANHALQSLSTYPFPIFFEEWQQQPKDVRNAWITGGIS >gi|312955573|gb|AENW01000038.1| GENE 6 3310 - 3666 324 118 aa, chain + ## HITS:1 COG:CAC0777 KEGG:ns NR:ns ## COG: CAC0777 COG0110 # Protein_GI_number: 15894064 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Clostridium acetobutylicum # 10 108 111 209 210 138 60.0 3e-33 MAATAKGCPECLDNRGDIVIGNDVWIGYEAVILAGVTIGDGAIIGTRALVTRDVAPYTIV GGVPARELRLRFPEETIAELLTLKWWDWPIELIQSNIAALQSGDIRRLKAACPHQTHI >gi|312955573|gb|AENW01000038.1| GENE 7 3717 - 4181 721 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKFLISLIVGITMMAIGTTMLVFEIKEFEFVDGRSAYYGSDTVKTQTFRVKDQDLNIVF EDDYYTGYEWKYDESMKDEVRIEYTSDMQVKTNGNTMIIEERYNHEWGVNDGMDFLNTFL DGLKQRKVYTMDYRDNVVIVSSSQMRDRVHVISD >gi|312955573|gb|AENW01000038.1| GENE 8 4186 - 5223 1335 345 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401495|ref|ZP_06645638.1| ## NR: gi|293401495|ref|ZP_06645638.1| hypothetical protein HMPREF0863_01778 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 345 1 331 331 382 60.0 1e-104 MTKDEFLRLLDRKLDVINERERRDIIDEYRTHIEMKMKEGKSEEEAIEDFGNIDELVDDI LDAYKINTDRVNRSFDTKLNRFMDDLFNGFQRFLGSFTSLQMDDVVRLVFEILVILILLA VLHIPFRMISSLGSSLLHSVAGFGIGSLLAAIWKFIIGVAYVAIFVVVLVNLCTKRLNRY RSHSRNGEGASVFDDFKESFDFDQAKKTVHSFTNDRSTRRETVYDERDDIKYQERDTQRG ETDDEYEDESMYEEPRRREYRRSYEGDHMERGVTSVATILMRIFFCLMMIPFVGIIVALC CALGAMIVLSFEGLTLFGAYFIVIGALVATGGFLSLLYSVLWRRG >gi|312955573|gb|AENW01000038.1| GENE 9 5210 - 5539 481 109 aa, chain - ## HITS:1 COG:CAC0571 KEGG:ns NR:ns ## COG: CAC0571 COG1695 # Protein_GI_number: 15893861 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 104 1 104 107 114 57.0 5e-26 MNTQFKKGVLELIVLLCVYKKDMYGYELVSEVSKVINVNEGTIYPLLKRLTNEHYFETYL SESTEGPPRKYYRITGNGKTRTTELLQEWNEFHEQVSRFIKESEIDDER >gi|312955573|gb|AENW01000038.1| GENE 10 5718 - 7034 936 438 aa, chain - ## HITS:1 COG:no KEGG:CD2753 NR:ns ## KEGG: CD2753 # Name: not_defined # Def: putative signaling protein # Organism: C.difficile # Pathway: not_defined # 37 423 36 420 900 168 28.0 5e-40 MRRMSLKRKLPVLLLVILVLGLSLHTGKSIQAALISKRRQAAETVIELFGKHLIQQLEAE NFASKLMFALNTKEKTNLTLFEEKAAKLQKDHAEIRFLSYFEQDTLQAIYPREKYKSAIG MKLHDVSYSYTLAKVIKDGVIAGPEKLSSTKEEVFLFIEPLYENNQYKGEIIAAVDSAYL IKAMNLEYLQKRGYEYELWRVNALGEKKTVVRVSDPSVDFSEAVKLEVSLPATWNLSILP ENGWLPYSVKLAINGICLLNALLILALVYLALRVHVQKKQLIRESYTDADSGLLTREGFF YFMKRAKQMQGDKEVSVLYIQLYNFYKLCKNSSMEEMQAYLQIIQQGVQEHLPVGSIAAR LSEEEFVIAIFEDTRSEKAMEAIEDFILQLFWKKKIQGKKVFVEPKSAIVRCVAKKTDAE ELLKLASMRLNALYDLHS >gi|312955573|gb|AENW01000038.1| GENE 11 7036 - 8601 1374 521 aa, chain - ## HITS:1 COG:RC0321 KEGG:ns NR:ns ## COG: RC0321 COG3706 # Protein_GI_number: 15892244 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Rickettsia conorii # 330 510 267 444 450 99 30.0 2e-20 MHKIKRKVQQKQESRILPFTPVRTYFLLFLMLYLLLVICAGSLLTIRSMKHSAQAAQQSA AAQISQRIDESLKLLNSLAALPEFYDPSVKWEEKVEKLDSINTQFGYMFICYVDEDIQVY TLGEEPASLAAREHMQKLYATKQPIVTDSFVAGADGVTLNYTVAVPLLQDGVMTGSLFCS IYFDDTVELLKKAASANQSEAVLIGSKGQIMSSTNGLSYGSSYVGQLQDVRMYSMTTDTL ETKLLARESGAFYSRKDGNLMYTAYGPVKNTNWDILITIDFFRLFSAMLPHLLLIAAITA AITLSLYLLVRAYSRQQKANMESMVAAVHRMERKLYKNSIPEQVDYDDLLQMSSTGLRDG LTGVVTRTVFLSRMQKLLESGEYGSCMTLCFVDLDDLKTLNDTHGHQAGDSALRKIGSIL REYEMKYEGIFGRYGGDEFILVLNDVDTAQEVHAVLSELVEKLNFSIAVRQKAVAVHCSI GACIWNKTDSLDVLIAKADKALYDVKRHGKKAYSLFLKGES >gi|312955573|gb|AENW01000038.1| GENE 12 8773 - 9285 524 170 aa, chain - ## HITS:1 COG:L181168 KEGG:ns NR:ns ## COG: L181168 COG0756 # Protein_GI_number: 15672158 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Lactococcus lactis # 37 168 16 148 150 103 44.0 1e-22 MEKIAKFHKVSMQRFEKDWGTAFPGTDAAEIQRIYEALRLPVRATKGSAGYDFFAPAAVS LKPRETIKIPTGIRAEIQEGWVLQLFPRSSLGFTYRLQFNNTVGIIDSDYFESDNEGHIF IKMMNDSTEGKTVQIRKGDGFAQGIFLPFGICEDDDVQKQRNGGFGSTNE >gi|312955573|gb|AENW01000038.1| GENE 13 9516 - 11351 235 611 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 590 110 355 398 95 29 5e-19 MAQRIMKEQEFESDVFDRGTWQKVFQLLWEHKKIVIPLIFFNTILAVTDVIMPLLNRYAL NTYVDDQTGADTLPVFILVYVGMILAQCLLVYLFFRLAARVESDFGKNLREKCFRKLQEQ TFSYFDRTANGWLMARITSDTARLAETLAWAFVDVVWGIFVMLGISVVMLLVNWQMALCV LVVVPLLWFVSLYFHRRILSAQRQSRKANSRITASFAEGINGAKTTKTLGIEQQNYNEFQ KKTDDMKRYSMRALRINAIFQPIVYLLSAVVIALLLYVGGEQVLLKTIQFGTLAMFINYA QLFFDPLKQIARVLAEIQMAQASAERVVALLEEEIEITDYPDVIERYGTLLKEHTDAYEP LYGDVVFDHVNFYYYENEPVLRDFCLQVKKGQTVALVGETGSGKSTIVNLLCRFYEPCSG RILMDGKNLRERSVGWLHSHIGYVLQTPNLFSGTIRDNIRYGRRDASDEEVEQVARLIQA HDFISRMEKGYDTEVGEGGDRLSTGQKQLISFARAMLCDPAIVILDEATSSIDTESEKAI QYAMDQLLHGRTSFVVAHRLSTIVSADIIVVLQHGVIIEQGTHEELMAKQGYYYELFTSQ YRQERIQRCME >gi|312955573|gb|AENW01000038.1| GENE 14 11317 - 13131 2095 604 aa, chain - ## HITS:1 COG:BS_yknU KEGG:ns NR:ns ## COG: BS_yknU COG1132 # Protein_GI_number: 16078496 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Bacillus subtilis # 1 601 1 585 585 329 32.0 1e-89 MKKIRFVWRYVRPYRYQFVLILLDVAVYSLFMLAAPLIISWMIDNVIKGVPFDNAFLQQL VDMAGGMEALQSHLWIGSALVVGSYLMVAFAINRRSMHAGNVAETLALNVRNDLYDHLQK LPFSYHKSRDSGDLIQRSTSDIETVRRFLANQFSEMLFAILNVTLASLILFSRSVKLTLV SIALIPLILIASYVFFSKAKKIFLECDLAESSMTTVLQENLNAMRVVKAFHQEQHEIDKF EEANDAYRKKYFDLMHALALFWSGTDFLGQMQILVMIVFGIGMALQGELSVGTFFVFVMY ESTIVWPLRQLGRILSDLGKVSVSITRIEEVLQEEAEDLESGLQPDISGNICFDHVSFRY EDGSRHTLHDLSFTIREGERIAIMGPTGSGKSSLVHLLSGIYDYDRGSITINGVELRDIA KSWLRRHVQIVLQEPFLFSKTIYENIHLSDHHAMKEDVVEAARMSCIHNDIEEFDQGYET MVGEKGVTLSGGQKQRVAIARSLLAKSPIMVFDDSLSALDMKTDAMIQEALQDIRYSMTM LMITHRVASAQNADRILVLEHGRLVQEGTHEELIKQDGLYRRIYEIQKEGGEAYGTAHHE GAGV >gi|312955573|gb|AENW01000038.1| GENE 15 13225 - 13482 325 85 aa, chain - ## HITS:1 COG:no KEGG:Nther_0742 NR:ns ## KEGG: Nther_0742 # Name: not_defined # Def: hypothetical protein # Organism: N.thermophilus # Pathway: not_defined # 4 83 2 81 89 89 46.0 4e-17 METFVYRPKGVCSREMRFEMDGDIIRNVTIVGGCAGNLLGISRIIKDKKISEVLDAFRGV RCGAKPTSCPDQIAEALSEYARKLG >gi|312955573|gb|AENW01000038.1| GENE 16 13511 - 13972 491 153 aa, chain - ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 151 12 164 180 64 34.0 8e-11 MLTAVSILFHMIESMIPVPVPVPGFKLGLANIVGLIAYYLFDARVMLSVNIMRVVLASLL RGMLFGTGFWLSMCGVLLSTLACILARKTPMSIYGVSVAGSSAHAIGQVIAVTLIYQQFF MQAILPVLILLGIPTGLFVAHVAKAVLKRIHIE >gi|312955573|gb|AENW01000038.1| GENE 17 14005 - 14385 417 126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401486|ref|ZP_06645629.1| ## NR: gi|293401486|ref|ZP_06645629.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 126 1 126 126 165 67.0 1e-39 MNKADKLFIMIVAVCACLLYVPLIWSAYRDAGREKEVVVSYKDREILRKSLSLNDVYTVK GTLGDVQVEVKDKRVRVEKENSPNHLCSIQGWVEDANRPIVCLPNNIVVQIEAGDVRDDD VDTVIQ >gi|312955573|gb|AENW01000038.1| GENE 18 14528 - 14947 626 139 aa, chain - ## HITS:1 COG:no KEGG:CTC01832 NR:ns ## KEGG: CTC01832 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 39 139 267 373 373 63 45.0 2e-09 MKKQVMMLGLSVLLCGCGGKSVEKEGTGTYTNDSGEKTTARVKLKNDKIAEVEIDETAKG KDKTKKELGEDYGMKQASPIKKEWNEQIAFFEKYVEKHGIDKIKLNQDGKAENNDVRSGC TISVDGFIKAIQDAEKNAK >gi|312955573|gb|AENW01000038.1| GENE 19 14999 - 16171 1223 390 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 22 333 74 368 430 140 30.0 5e-33 MKKILMLCCMMAMLLGGCSRQQPAPQPKPKKENPVRSVSLSFTGDILMEDALYNWMGKGY SFKNYFDKVTPYLDSDLVIGNQEVVLGGRELGITGSDYTFNAPEEIAKQLPEIGFNVLTF ANNHSYDRGMQGIVNTRRNLEDAGIRTTGAYENKAQRDDILVVERNGVRFAILAYTYDTN QPIDAENGFAVNHFLNEGHVFDDRCKKQLAKDVQKAKEQADVVIAAMHWGTEFTYELDAA QRDAAVFLNEQGVDIIIGNHPHCLQRVETLTNAQGKETFVMYSLGNFVSAAMGVDRASEQ FTNMYEIGGIVQCDVEFHTETGKTEVKNKKMIPIVNHFDASYDNFQLLPFSSYSEELAAE HGQRTVSADFTYAWLREQLKQLYDGEITWQ >gi|312955573|gb|AENW01000038.1| GENE 20 16660 - 17082 621 140 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401483|ref|ZP_06645626.1| ## NR: gi|293401483|ref|ZP_06645626.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 129 1 127 139 139 68.0 8e-32 MKKLTVLLAMTMLLAACGGNSEPEKKGNGESAKDKNGDYATAEITVQGDDVVAINLDETK EGKSKKELGDKYGMKAASKKAKKEWDEQVEFLENYIEKNGLDKVEMNDAGYPVNDDVLAG CTINVKNLMDAAKNAKDNAK >gi|312955573|gb|AENW01000038.1| GENE 21 17237 - 18718 2001 493 aa, chain - ## HITS:1 COG:lin1573 KEGG:ns NR:ns ## COG: lin1573 COG0554 # Protein_GI_number: 16800641 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Listeria innocua # 4 493 5 496 497 612 58.0 1e-175 MTSYIMAIDQGTTSTRAILFDKASNIVGVAQKELENYYPHPGWVEQNANDIWASTIGVMF EVLAKTGVRDTQVAAIGITNQRETTVVWDKESGQPIYFAIVWQSRQSDTYCQKLKEQGLE GMIREKTGLLLDPYFSASKIRWILDHVEGAQARAEKGELLFGTMDTWLLWKLTKGAKHMS DVSNASRTMLMNLETLQYDEELLKLWNIPRCMLPEIRDSSEVYGVTSGVFDHPVPVAALI GDQQAALFGQTCFDAGNVKNTYGTGCFLLMNTKERPIHSAHGLVSCVGWRIRGETDYVLE GSVFVAGAAIQWLRDGLKILHSSAESEQRALQVADSDGVYVVPSFTGLGAPYWKPQVKGG MFGLTRGTTQEHIIRATLEALAYQTNDVLQAMKQDSGLDIAQMQVDGGASRNDYLLQFQS DITDTCIVRSTISETTALGAAYLSGLAMGFWKSKEEIRSQFQVSRRFTPQMDAQQRAACL QGWNKAIHAILDF >gi|312955573|gb|AENW01000038.1| GENE 22 18927 - 21512 2372 861 aa, chain - ## HITS:1 COG:CAC0527 KEGG:ns NR:ns ## COG: CAC0527 COG0577 # Protein_GI_number: 15893817 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 859 1 861 863 284 24.0 7e-76 MNIIQKVTWKCMKAAKRRTMVTIFGVILSVAMIAAVSTIAQSFQDLMLRNARSNFGDFEM EFYDVPAKQAEKLVKDSRIKESLISYHDTCAFLKDVKDAQRQYIQLQVYDMEHLHLNALQ LVKGTLPRQKDEILLSESFMETSGTAWKIGDSITLPIGYTVQKDGSRSYSQWNSDDATGE SFHQTGERTFRITGIMDDGKVHFGSQNYAFYLPFQGNEGTLDNRYVISFTMKERTASIYE DAQQLAEDYGLQDVQINPNNTLLMFYGINDDNGFMTTITLATGMVALIIMIGSISLIYNA FAISLSQRSRYLGMLASIGATQKQKRSSVFFEAFVIGAFAIPIGILCGYAGIGITFLCIQ SLIQGMFETMVELRLVITWQSVLVSVLFSFIVLLISAWLPARRASRITPIDALRQNQDVS IRVKDVRRTRWIRKWFGFSAALGAKNMKRSRHRYYATLFSLIISMVLFMTAYSFSTFISQ AFSMAQGEIPADVTGGMNGYSQPEGDAIREQLSRLPSAEEFLYMESVTLQDHSTAAYSDQ LQQLLDEQGRHFDEPQQRLSFEIIALNDQSFARYAGEVNASMEDFTGSDAQAILLNKLTC KKENTFTDYRLLENAEKGMTLQAAMDKRSYETAIHVAAVSEVHPWFMPANVDDIHTIYLI TNEQSMRILKKQLQLTQDMLSMKFQYRSSQPYALENELTQLQSQHPAGTIFKSNIRALKD RQNQLSLFLNVFLYGFVALILLVSAANIYNTISTGIALRRREFAMLKSIGITPGAFRAMI RMEIMQYLGRTMLFGIPLTLLVIYGVYAVLQRNFAFAFAFPWQGLLFIILLLAALLFMSM RLALQAMKHDNLMETIRQESI >gi|312955573|gb|AENW01000038.1| GENE 23 21509 - 22195 321 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 201 1 199 223 128 36 5e-29 LMEILRVEHLTKRYGQGEAQVSALDDVSFCVEQGEFVAIVGPSGSGKSTLLHLLGGVDRP TGGKVYVSDKDMYALDETALAIFRRRQIGLIYQFYNLIPVLNVEENITLPLLLDNRSVNT QQLDSMVEALGLKKRLQHLPSQLSGGQQQRVSIGRALMASPAIVLADEPTGNLDRANSRE IIDLLKRLHDELHQTLIIITHDEGIALQADRILKIEDGHIVRDEVIRR >gi|312955573|gb|AENW01000038.1| GENE 24 22251 - 23255 957 334 aa, chain - ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 329 1 329 329 203 35.0 4e-52 MLRNTELRIAIWVSLALMLVTACLLQPISTAAMLITLFTQGMLLTIYLLLSRYRYAQLKK LSMYLQQVYQGDGAFDIPQYREGELSILHSDLYKITRTLQLQKESLQKDKLFLADSLSDI SHQLKTPLTSMMIMSELLQDEELPRKQHNQFADALRHQLKRMEWLVSTLLKLSRIDAQVL QFHPQQLSVYQLLQESLESLHIMMELKEQTCTLVCDEGLEVTLDMKWSVEALGNILKNCV EHTPQQGSIHISVQDNPLHTCIRIQDSGKGIPAEELPHIFERFYRGRNASIDSAGIGLAM SKAVFQQQNGDVEAIASEQGACFLIRIYKDVTIL >gi|312955573|gb|AENW01000038.1| GENE 25 23245 - 23934 815 229 aa, chain - ## HITS:1 COG:CAC0524 KEGG:ns NR:ns ## COG: CAC0524 COG0745 # Protein_GI_number: 15893814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 3 223 1 221 228 241 53.0 9e-64 MLMKLLFVEDDQAIAMGLVYTLKKEGYEVVWCDHKRSALQQLDQQTFDLLLLDVGLPDGS GYDICTYAKSRQDVPVLFLTALDDEGNVVMGLDMGGDDYITKPFRINELLSRMRSVQRRY HRQEEDIVQIQYLSIYPKQGKVYREQEEVLLTALEYRLLMVFINHPQQVLSRSQLLEGIW DAAGDFVNDNTLTVYIKRLREKLERDPQNPSIIVTVRGLGYRLELHHAA >gi|312955573|gb|AENW01000038.1| GENE 26 24843 - 25538 637 231 aa, chain - ## HITS:1 COG:no KEGG:BDI_2733 NR:ns ## KEGG: BDI_2733 # Name: not_defined # Def: hypothetical protein # Organism: P.distasonis # Pathway: not_defined # 1 227 1 227 227 275 58.0 1e-72 MKYFGEGLSEQHKKLQHMIRKEQELEAAKELFLSLHAALHASAVSETPCNEVDALLQDLQ EYEYAIMPTREAETIAWVIWHIARIEDLTMNMLVARQEQVWNPDWKQRLQIRLDDTGNAL TDDEIMDFSKTVCIPELLAYRNAVGRRSRQLVQELTFADMKRHVSQQDLARIRLCGGVSE HPDSLWLLEFWGKKDVAGILLMPPTRHMLLHLNDCCRWKLEIRNRKHLYRS >gi|312955573|gb|AENW01000038.1| GENE 27 25879 - 26319 410 146 aa, chain + ## HITS:1 COG:no KEGG:Ccel_2418 NR:ns ## KEGG: Ccel_2418 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 6 135 7 135 142 89 35.0 3e-17 MDIQQDSTHIPQIEDFYAVIHNKLFEKFLQAMKDIFSCEPQMEFSRCTWEYGWNMKFKKR GRNLCTLYAREQYFTLLIVIGKKEAPYLEALLPHLGDAMQEIIQETAEGNGQCWLMIDVE DEGSVYQDIWKLLALCAGCYDVAESE >gi|312955573|gb|AENW01000038.1| GENE 28 26393 - 27244 1030 283 aa, chain - ## HITS:1 COG:all0345_2 KEGG:ns NR:ns ## COG: all0345_2 COG4978 # Protein_GI_number: 17227841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator, effector-binding domain/component # Organism: Nostoc sp. PCC 7120 # 126 277 4 152 155 89 32.0 9e-18 MNKDFFCHQDEPEKLYRIGVFSQMNHITVKTLRHYDEIGLLKPAYVDEDSGYRYYTSNQL LPLHKILALRDMGFSLEEIRQVCNGASQEQLLKKRKQQLLKIMAETGEKLARVEGYLSGG HLDDEYRVILKSLPAVTIASMRVHLDSYADLFYKMPDMGLEMEKAGCECKEPEYCFTMYY DDEYREQDVDAEICEAVTEMKEDRGDLKFRELPAVELAACVMHKGAYRTLPLAYRAIVSF IEDNGYEMIGHQREAYIDGIWNKDSEDDWLTEIQFPVRKIQRT >gi|312955573|gb|AENW01000038.1| GENE 29 27262 - 28002 756 246 aa, chain - ## HITS:1 COG:RSc0165 KEGG:ns NR:ns ## COG: RSc0165 COG0842 # Protein_GI_number: 17544884 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Ralstonia solanacearum # 60 234 192 367 381 72 27.0 6e-13 MKRFLTFLKVEGKLSLRSPDGIIFGIGMPVGVLLLIAVVAGSQSAGGADYSFLQSAFASL LTVGICATAFMGLPLTIADYRDKKILKHFFATPIRPFMILSVQVVIGMLTSFFSAALVTV LAVFGFGYRMEGDPFLFIGAFLLVMLSMYSIGMILASLCKTVKIANVVTTFVYFPMLFLS GATIPFELFPDTVQKVCNVLPLTHGIKLLKAVSLNMWSQEIWISVALLIVFAVVGCILSV VSFKWD >gi|312955573|gb|AENW01000038.1| GENE 30 27999 - 28718 311 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 3 205 4 212 311 124 33 8e-28 MKSIEVSDITKTYNGRTVVDRLSFSVDKGEVFGLLGHNGAGKSTTIDCLLGLTKPDSGSA RILGQNAAKHRKTLFEHVGVQLQHAAHANNIRVCEVCEETAALYHEPADYHALLKQFQLE AFTNQKVEQLSGGERQKLSVVVALIPNPQVIFLDELTTGLDVAARREVWHILKSLKQKGM TIFLTTHYMEEAENLCDRLLILKQGRKLCEGSVEELIENSPYENLEEAYLWYSEEEVSI >gi|312955573|gb|AENW01000038.1| GENE 31 28898 - 29308 326 136 aa, chain - ## HITS:1 COG:no KEGG:Clos_1272 NR:ns ## KEGG: Clos_1272 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 126 1 116 121 77 40.0 1e-13 MRNITKEQLESAHKEIVAIIRKCENMEGKFAAGTSQHTLLKNRLFSMRVAKQLIEEKLTA LQMNAAIENANIVSLQELASAIEPVRSIIRKCRKAQSKYEKETAHYNRHEPMIHAMQIAE QLLEEQHQLQQEAEAR >gi|312955573|gb|AENW01000038.1| GENE 32 29378 - 30016 614 212 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGLIRKDLYYLASSWKPLLLSVFIIGGFSTWKGFGAILIVILPTFFGLSIMGCIQMDAQ NKWYDYYRVLPISFRNVVAARYFAYLAFTGIGFLITVVYGYVIQFTMGITALGTRFAMWQ GFSMGIALALSFAAVFIPATYYNKGEKMEVSMMMSGFVSFGAVYLASKLLMLFGIQLMDY ADMFLQILLGSSLLLFAISWTASNIIVQKRAS >gi|312955573|gb|AENW01000038.1| GENE 33 30013 - 30870 291 285 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 2 230 3 232 311 116 31 2e-25 MDALMLKNVSKAYENFQLKDISFTLPEGTIMGLIGENGAGKSTIINCIMDLVKRDSGEIT VLGQQMDKDNLALREDIGIVFDVSDFYDSFSIEHTEKILQDVYKNWDHETFQRYKQQFAL PDKKRMKEFSRGMKMKTAIAIALSHKPRLLILDEATSGLDPVMRDEILEVFMEFVQDEHH SILISSHISTDLEKVADYITFVHNGELVLSALKDELIYQYGIMKCREEDFKQLNPDDIIR YRKQPYETVVLVEDREAAAHNYPNCIVERATLDDIMLLYVKGERI >gi|312955573|gb|AENW01000038.1| GENE 34 30886 - 31260 396 124 aa, chain - ## HITS:1 COG:BH0651 KEGG:ns NR:ns ## COG: BH0651 COG1725 # Protein_GI_number: 15613214 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 123 1 123 123 102 50.0 1e-22 MQILISNHTTKPIYEQITSQIKHAIMNGELKSGDPLPSMRALAKDLHISVITTQKAYEDL QRDGFIESAAGRGTFVSSQNKEFICEEQLRLAEAKLQEAAEIGRLNGISLETLTKLLTMF YDEG >gi|312955573|gb|AENW01000038.1| GENE 35 31633 - 32355 577 240 aa, chain - ## HITS:1 COG:SMa2239 KEGG:ns NR:ns ## COG: SMa2239 COG4422 # Protein_GI_number: 16263660 # Func_class: S Function unknown # Function: Bacteriophage protein gp37 # Organism: Sinorhizobium meliloti # 3 207 13 228 259 74 27.0 2e-13 MNWEPWTGCYKISEGCTNCYFYGPHAKRYGQNTIQKTDKFDWPIRKNAKGEYNIKGNKIL ATCFATDFFLPEADAWREEIWAMIKQRTDIEFLILTKRIDRFPVALPDDWGSGYEHVNIG CTVENQEAADYRLPLFLSYPMKRRFIACAPLLEAIDLTPYLDGVDHVTVGGETGREARIC DYEWVLDLHRQCGEAGKTFWFKNTGSFFRHDGIIERVNPFKQTGKAKQCGIDITDGRRLF >gi|312955573|gb|AENW01000038.1| GENE 36 32494 - 32898 463 134 aa, chain - ## HITS:1 COG:alr2922 KEGG:ns NR:ns ## COG: alr2922 COG0346 # Protein_GI_number: 17230414 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Nostoc sp. PCC 7120 # 1 129 1 127 135 77 34.0 9e-15 MKFKETTIRVLVRKNYGECFDFYTQKLGLHVVWGDRNGPYTSFAADSQEEPCFAIFLGDA MPMFQGYVQPDTNKQPDTVTAVIPTDDLDQDYYRLQEAGVEFLGEPQFIEAWGMRCTYFR DPEGNLFELNDASV >gi|312955573|gb|AENW01000038.1| GENE 37 33285 - 33455 91 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVIYIKELVKNDFDKNGFQIDTFQRDWIETLNSMNNEVDEFITSDPNVTKNFSES Prediction of potential genes in microbial genomes Time: Sat May 14 02:35:05 2011 Seq name: gi|312955566|gb|AENW01000039.1| Clostridium sp. HGF2 contig00039, whole genome shotgun sequence Length of sequence - 9131 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 4, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 54 - 100 7.3 1 1 Op 1 . - CDS 151 - 1737 1879 ## BDP_1333 arylsulfate sulfotransferase - Term 1836 - 1867 3.4 2 1 Op 2 . - CDS 1872 - 3356 1492 ## COG4868 Uncharacterized protein conserved in bacteria - Prom 3381 - 3440 4.9 + Prom 3482 - 3541 8.6 3 2 Tu 1 . + CDS 3615 - 4877 1541 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 4885 - 4924 2.1 + Prom 5028 - 5087 3.5 4 3 Op 1 . + CDS 5135 - 5839 585 ## COG0491 Zn-dependent hydrolases, including glyoxylases 5 3 Op 2 . + CDS 5902 - 6621 575 ## COG3394 Uncharacterized protein conserved in bacteria 6 3 Op 3 . + CDS 6648 - 7328 540 ## gi|160914898|ref|ZP_02077112.1| hypothetical protein EUBDOL_00906 + Prom 7346 - 7405 7.3 7 4 Tu 1 . + CDS 7590 - 8165 388 ## Predicted protein(s) >gi|312955566|gb|AENW01000039.1| GENE 1 151 - 1737 1879 528 aa, chain - ## HITS:1 COG:no KEGG:BDP_1333 NR:ns ## KEGG: BDP_1333 # Name: not_defined # Def: arylsulfate sulfotransferase # Organism: B.dentium # Pathway: not_defined # 43 526 55 554 555 416 48.0 1e-115 MNKKKRSAMILTIATVSLCLVAWLSKPNTTNTIGSIVSGKTAVKEIYNVEKQNTIRKTLD EQIAQGSHSENNALMVYNPFGTNTLSMYTYFTTAQGAKISYTIHVEDDKIADFTRTLNSD YTRTHEYQLIGLIPDHENTITLHMEYEDGTNKDVTYTYTCGSLRGNESIQLEAKEGSSRE ELSDGLYVILGNDSDEDDFMYYYDNNGILRGEVPIEGYRSHRLLFANERMYYSISTNKMA EMDALGQITNVFDLGNYDLHHDYVFDDNGDMLILATDTTKDTVEDMIIRLDVSSGAVSQV VDMGDLFPTYKASVYDKDNDELDWTHLNTIQWMGNNEILVSSRETSTIVKITDIYGTPEI DYMMGEKTYWEDSDYADLLLDKANSFTSQTGQHSITYVEDDSLADGQYYLYMFNNNFGYS STNTAYDWSQLNIPTEVKAEDAVSKYYKYLVDESKGTYELVDTFDVPYSPYVSSVQNIGG NTVVDSGMAFNFQEYDSDHTLIRSFTMEGEKYIYRVYKYTFDGFYFNQ >gi|312955566|gb|AENW01000039.1| GENE 2 1872 - 3356 1492 494 aa, chain - ## HITS:1 COG:SPy1343 KEGG:ns NR:ns ## COG: SPy1343 COG4868 # Protein_GI_number: 15675279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 494 25 518 518 627 60.0 1e-179 MKEVAFDNDKYLKLQSKHILERISNFDNKLYLEFGGKLFDDHHAARVLPGFQPDSKLEML LELKEEVEIVIAVSANDIEKNKIRSDMGITYDVEVLRLIDAFRDTGLYVGSVVITQYANQ ASADTFKAHLEHLGVHVYLHYPIAGYPNNIPLIVSDEGYGKNEYIETTKPLIVVTAPGPG SGKMATCLSQLYHEHKRGIKAGYAKFETFPIWNLPLKHPVNLAYEAATADLNDINMIDPF HLEAYGETTVNYNRDVEIFPVLNAMFEKILGTSPYKSPTDMGVNMAGYCIMNDEAAKRAS SDEIIRRYYKARVDYKKGHTSEDTIGKIEIIMSQANIQPEERNVVKPALDKSEETEAPAV AIELPDGRIVTGKTTSLLGASSAALLNALKALGNINDEIPLISPNIIEPIQKLKVNSLGN HNPRLHTDEILIALSISATTNPVSHLALQQLDKLKDCEAHSTVILSQVDANTFRKLNVNL TCEDRYQTKKLYHR >gi|312955566|gb|AENW01000039.1| GENE 3 3615 - 4877 1541 420 aa, chain + ## HITS:1 COG:BH3784 KEGG:ns NR:ns ## COG: BH3784 COG0766 # Protein_GI_number: 15616346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Bacillus halodurans # 3 417 2 415 428 477 61.0 1e-134 MEEVIKIEGKHALEGTVRISGSKNATVALIPAAILANGPVTICGVPEISDVQSLSVLLRD LGVLVDIRSSDTIVIDPTSMENRPLVQDAVNKLRASYYFMGALLGKYGHVEIKMPGGCYL GPRPIDLHLKGFEALGAEIRYDHGSYILDAPQLTGTKIFLDIASVGATINIMMAAVHAKG RTTIENAAKEPEIIDVATLLNKMGANIRGAGTNVITIDGVDQLAGCFHEIIPDRIEAATY IVLAAAAAKEVRIDNIIPHHLEALLSKLKEIGTDLEIGVDNVVIRASRDLKAADIKTLPY PGFATDIQQPLTALLTQAQGQSIVTETIYTERFKHCQELNKMGANINVMIPSSFINGPTP LSGAEVYATDLRCGACLVIAGLIADGVTTIHNIYHIERGYEHIDEKLTALGAKIWRETVE >gi|312955566|gb|AENW01000039.1| GENE 4 5135 - 5839 585 234 aa, chain + ## HITS:1 COG:MA2009 KEGG:ns NR:ns ## COG: MA2009 COG0491 # Protein_GI_number: 20090857 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Methanosarcina acetivorans str.C2A # 27 212 22 213 227 62 26.0 8e-10 MKLREHLYLLSGGVYGKLGNVYALQHDSGYILIDCGRYDALDIIRQNMAYWNISEHKITH VLLTHGHDDHAGSSSWFQSMGAQIYVGTGDEMNMITGNFGPESPFTNHVMPPCHPDVCIH EDMDISVGGLCIHALRMPGHTSGSMLYYVMLDKEAVLFSGDMFFADGETGEAAYTGWKGD MAYDGLRLLESFQKLWRLQLHPDMVAGGHGIPVIGSHADQIIMLAYKYAMLNNR >gi|312955566|gb|AENW01000039.1| GENE 5 5902 - 6621 575 239 aa, chain + ## HITS:1 COG:BH0913 KEGG:ns NR:ns ## COG: BH0913 COG3394 # Protein_GI_number: 15613476 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 3 217 2 225 237 144 39.0 2e-34 MKRMIVNADDFGFSEAVNHGILKAMLEGIVTLTSIMANMPGFAHAVQLYHEHPDMAVGVH LNLTCYRPLLSTHQTLVTETGYFHKQDDVAGYSESEMYEELKAQIDCVLAHGIRIDHLDS HHHIHTTQKLQKVMEKLNKEYALPFRGGFAYPVSFPHAQLCMDFYDSGVSLSALEAVCAN ISDHEVTDLMCHPAYIDQFLYETTSYSWKRMKELEILCSEEAAALLQRYQIQLCTYKEV >gi|312955566|gb|AENW01000039.1| GENE 6 6648 - 7328 540 226 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914898|ref|ZP_02077112.1| ## NR: gi|160914898|ref|ZP_02077112.1| hypothetical protein EUBDOL_00906 [Eubacterium dolichum DSM 3991] # 1 217 22 238 249 237 56.0 3e-61 MLRIAILENEEAAKNIMFSLAQYLQEEDCCFYCFKKISQFAKAEAEKEFHVVIFHEKMEV PRITQSFVLRKPQRIIIYTKTKISASEQQILPFSRIFYVERKHLQSEMERILPHMQKLLR NQDEYLFSYNNVKVPLKISDIYYIEEEGKLLVYHTRRGEFRERKNMKDAYEIFKPYNFLW IHVSYLVNIMYIMKIENDMVMLPSLHLPISRSKKAEVLSAFHSLIE >gi|312955566|gb|AENW01000039.1| GENE 7 7590 - 8165 388 191 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAFGVVCYVMWMRGIEEAIHFIKEDSPREILWGESLAEKDFVELDSSARDATVLFHYDDS IINKEQLLTVTVSCNGYKTSRAFNLTIVDRDPPIIKYTGPVKIESDPNVRLSDYLKVYDV RPYDKVVFDLQEKDGDKAYRYYEYTCDENNQTCSFDEDAVGVHTVHISAYDGHGNQAYKT IKIIVTSPAYH Prediction of potential genes in microbial genomes Time: Sat May 14 02:35:31 2011 Seq name: gi|312955558|gb|AENW01000040.1| Clostridium sp. HGF2 contig00003, whole genome shotgun sequence Length of sequence - 6540 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 3, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 5.8 1 1 Op 1 . + CDS 81 - 926 989 ## EUBELI_00615 hypothetical protein 2 1 Op 2 1/0.000 + CDS 997 - 2502 1806 ## COG0457 FOG: TPR repeat 3 1 Op 3 . + CDS 2520 - 3128 678 ## COG2135 Uncharacterized conserved protein 4 1 Op 4 1/0.000 + CDS 3125 - 3850 632 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 5 1 Op 5 . + CDS 3922 - 4401 231 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 4471 - 4518 5.6 - Term 4459 - 4506 5.6 6 2 Tu 1 . - CDS 4510 - 5124 799 ## COG3601 Predicted membrane protein - Prom 5325 - 5384 6.4 + Prom 5604 - 5663 5.4 7 3 Tu 1 . + CDS 5685 - 6077 430 ## Cthe_2665 Zn-finger containing protein + Term 6154 - 6187 0.7 Predicted protein(s) >gi|312955558|gb|AENW01000040.1| GENE 1 81 - 926 989 281 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00615 NR:ns ## KEGG: EUBELI_00615 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 278 1 277 285 221 42.0 2e-56 MQDVLQDVFHDALPMIPFLFLTYLLMEYLEHKSNDRFQKRLESARALGPLIGGILGIVPQ CGFSVLASGLYMNRSISLGTLLAVFISTSDEAIPILVAQPKQINVLFSVIAVKLVIAVLV GYIVDLLVRGHRLKENHPLHDIHAECEKESVEEHHSIVYIAMIRTIKIFIFVFAVNFALS VFIYYIGEDTLRTILAQGSYLQPMLAALAGFIPNCAASVILAQLFMDGVLSFGALTAGLI TSAGLGLLVLLRMYDNKKDILRIFAILFVTAITSGIVLQLF >gi|312955558|gb|AENW01000040.1| GENE 2 997 - 2502 1806 501 aa, chain + ## HITS:1 COG:FN1964 KEGG:ns NR:ns ## COG: FN1964 COG0457 # Protein_GI_number: 19705260 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 40 498 62 526 709 149 27.0 1e-35 MDYKEEFTQLIEENRLDDARILLEKHKLYASEEPFYYGNMGWILNHMERYQEAEVFLRKG LVYFPEDGWIYSQLGFSLDRQGNIRDGLDALLKALELGFDEPWLHGEIGWCYKELGNLKD AITYFENGLLDDERNIWLLSQAAEAYYGLGDKVTAEEYYVRSYRILPDEDARFDLARFYK ACGEYDKEIQILQEIQHEHYQDWREFELGFAYFQKNEPQEALLHLLKALELGRDDTSERT LLGDVYRSLQRIRESDEQYNTALEYFEKALQKETDIYWIYQEMIWIAHKQQDWTKKLQYL ERASEEKKDDLWLMFHYARCYSDLHDHVKAIAACEFCLQHGEEGREMQDLYAWNLGRSSQ GEKAIAVLKKRIERFGGEAWNFSELGWNYTQLEDYKEAIRCFKKAYDLEPKNPLNCSMLG WCNLRLNQLDAALSFLLEARQLGRDDGWLHSAFGELYTEKQKYAQALEHYQKALEQGYNE NWIKKEITQLEGLLEERNEKA >gi|312955558|gb|AENW01000040.1| GENE 3 2520 - 3128 678 202 aa, chain + ## HITS:1 COG:BS_yoaM KEGG:ns NR:ns ## COG: BS_yoaM COG2135 # Protein_GI_number: 16078926 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 35 157 35 174 227 86 35.0 3e-17 MCGRYFFELRELPAFARLKHKIEQQALFEFAREEVFPGNQALVLVNGQDDFSLDVMKWGI EGPYGKLINARSEGIEKKKTFRPMLSKKCLIPCNGFYEWVKVGKQKQKILIQREDAPLFY LAGIYNEHKEFVIVTGESVRQMKDIHDRTPILMLEDQIPLYLQDELEFQVDNERLTFTAV DTRKAPVPAKNSQLSLFDEDER >gi|312955558|gb|AENW01000040.1| GENE 4 3125 - 3850 632 241 aa, chain + ## HITS:1 COG:AGl927 KEGG:ns NR:ns ## COG: AGl927 COG0600 # Protein_GI_number: 15890580 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 235 23 250 269 65 25.0 1e-10 MRQARILSSAFLLFLLWWLLAVWMDNDFIIPYPLDVLKLMGAQLQSAAFYQSTLVTLLRS WGGLLAAFVMAGGCAFLSYRMPAFHDLFYPILLLTRSVPNISYIIVILLWFGSESSAAIV SFLIIFPTIYSSLYSGLQHMDENLKRVVQLYPESRWYLLRRVYLPLLSSSIQASLSNGIS LTFKVGVMSEIMGQVPMGIGRQMNLCRLTSDMTGVFAWTGWIILILLLMDALLHFAGRQK V >gi|312955558|gb|AENW01000040.1| GENE 5 3922 - 4401 231 159 aa, chain + ## HITS:1 COG:SPy1144 KEGG:ns NR:ns ## COG: SPy1144 COG0454 # Protein_GI_number: 15675121 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pyogenes M1 GAS # 7 120 2 117 150 84 40.0 6e-17 MKGHIQLRPARQEDAAALQCLNADVLGYDCSLSDTQKQLRRLLHMPQHLLVVAERKQELI GYVHAQDYDILYAAPMIDILGIAVHPDYQQQGIGSRLLAEVEQWAENQNVCMIRLVSGEY VQGHMPFMKQGAMCVRSASSTSKRSSKSMRSRPLVCWEG >gi|312955558|gb|AENW01000040.1| GENE 6 4510 - 5124 799 204 aa, chain - ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 13 204 6 195 209 144 41.0 1e-34 MSAYVSTKSRMSVQTIAKISILGALAFLVMMFEIPLPFAPDFYKLGFDEVIVLIGGFALG PWAAVCIEALKIALNLLIGGTITMGVGELTNFLIGLSFVLPATIIYQRDKTRKHALLGLI AGTICMTILGGLLNYFVMLPAYSYFMNLPLDRIIEFGHAVNPNINGLLALVLMATTPFNV LKGVLCSIVVFLSYKKVSPVIKKQ >gi|312955558|gb|AENW01000040.1| GENE 7 5685 - 6077 430 130 aa, chain + ## HITS:1 COG:no KEGG:Cthe_2665 NR:ns ## KEGG: Cthe_2665 # Name: not_defined # Def: Zn-finger containing protein # Organism: C.thermocellum # Pathway: not_defined # 1 130 1 134 134 114 42.0 1e-24 MKWFQNFMRGRYGVDQLSFALLILYFVITILGTAFRIPYIGYVALLLIVWCWFRILSRNT YKRSQENAKFMGWIYPIQNKWRTKKREFQDRKTHKYYNCPNCKQRLRVPKGRGTITITCP KCKTKFDKRT Prediction of potential genes in microbial genomes Time: Sat May 14 02:35:38 2011 Seq name: gi|312955556|gb|AENW01000041.1| Clostridium sp. HGF2 contig00064, whole genome shotgun sequence Length of sequence - 663 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 115 - 567 284 ## Cphy_1803 transposase - Prom 591 - 650 1.8 Predicted protein(s) >gi|312955556|gb|AENW01000041.1| GENE 1 115 - 567 284 150 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1803 NR:ns ## KEGG: Cphy_1803 # Name: not_defined # Def: transposase # Organism: C.phytofermentans # Pathway: not_defined # 23 147 313 432 434 95 40.0 5e-19 MVDGLAVLDSILGKSLFEQEAHITLTDRGGEFTDAEHMEKRDDGTRRTRVFYCDPMQSGQ KGSLENMHRELRYILPNEVDLRSIGLTDQTSLNVAISHINSSAKEHLNGKSPFELCEFMC PELAQKLYEFGLQKIDKDEVILRPSVLTHK Prediction of potential genes in microbial genomes Time: Sat May 14 02:35:41 2011 Seq name: gi|312955554|gb|AENW01000042.1| Clostridium sp. HGF2 contig00009, whole genome shotgun sequence Length of sequence - 947 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 894 1051 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Predicted protein(s) >gi|312955554|gb|AENW01000042.1| GENE 1 1 - 894 1051 297 aa, chain + ## HITS:1 COG:BH1742 KEGG:ns NR:ns ## COG: BH1742 COG0329 # Protein_GI_number: 15614305 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Bacillus halodurans # 4 272 15 281 295 174 36.0 3e-43 FHRDEEQSINYEATKQLIDHLIAKGVKGIFILGSNGEFHVIDEAEKIEFAEKVIGMVDHR VPVYVGTGACSTKETIRLSKKMEELGADALSVITPYFLTPTEEELVQHFTAVAESVSIPI ILYNIPKATGCNLSAEVVGRLAEVENIRGIKDSSGKEENLKAYAELAKRDDFDLLIGSDS KISYGYALGASGAVAGTSNVITEVLVELDRALRKGETEKAEALQKDIDVLRGVLKLGTVP VVMKRAAELAGIAEIGPARKPVLECSVQDDEKSKRCCSIIIYYKKDLYPFGICLNKV Prediction of potential genes in microbial genomes Time: Sat May 14 02:37:07 2011 Seq name: gi|312955264|gb|AENW01000043.1| Clostridium sp. HGF2 contig00078, whole genome shotgun sequence Length of sequence - 289918 bp Number of predicted genes - 279, with homology - 267 Number of transcription units - 126, operones - 65 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 149 - 195 2.6 1 1 Op 1 . - CDS 386 - 1327 528 ## Cbei_2198 hypothetical protein 2 1 Op 2 1/0.167 - CDS 1338 - 2006 666 ## COG0637 Predicted phosphatase/phosphohexomutase 3 1 Op 3 . - CDS 1993 - 2640 805 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 4 1 Op 4 . - CDS 2675 - 3604 968 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 5 1 Op 5 9/0.000 - CDS 3604 - 4035 508 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 6 1 Op 6 1/0.167 - CDS 4032 - 4538 671 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 7 1 Op 7 13/0.000 - CDS 4557 - 5417 1124 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 8 1 Op 8 . - CDS 5447 - 6268 951 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 9 1 Op 9 . - CDS 6294 - 7187 829 ## COG1023 Predicted 6-phosphogluconate dehydrogenase - Prom 7239 - 7298 10.2 + Prom 7459 - 7518 11.9 10 2 Tu 1 . + CDS 7601 - 8446 785 ## COG1737 Transcriptional regulators + Prom 8640 - 8699 7.5 11 3 Tu 1 . + CDS 8762 - 9952 648 ## COG1876 D-alanyl-D-alanine carboxypeptidase 12 4 Op 1 . - CDS 10950 - 12824 1741 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 13 4 Op 2 . - CDS 12838 - 13173 268 ## gi|293399750|ref|ZP_06643896.1| conserved hypothetical protein - Prom 13254 - 13313 6.1 14 5 Tu 1 . - CDS 14789 - 15499 669 ## COG1741 Pirin-related protein - Prom 15600 - 15659 3.7 - Term 15758 - 15789 0.2 15 6 Op 1 32/0.000 - CDS 15790 - 16650 378 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 16 6 Op 2 . - CDS 16650 - 17723 1377 ## COG0216 Protein chain release factor A - Prom 17779 - 17838 4.0 17 7 Tu 1 . - CDS 18039 - 20315 1551 ## Cbei_4159 regulatory protein, LuxR - Prom 20336 - 20395 4.5 - Term 20678 - 20720 7.1 18 8 Op 1 . - CDS 20726 - 21265 712 ## gi|160914617|ref|ZP_02076831.1| hypothetical protein EUBDOL_00624 19 8 Op 2 . - CDS 21288 - 22901 1788 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 22923 - 22982 6.0 20 9 Tu 1 . - CDS 23005 - 24366 1379 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 24421 - 24480 3.7 + Prom 24399 - 24458 3.3 21 10 Tu 1 . + CDS 24479 - 26014 1739 ## COG3711 Transcriptional antiterminator + Term 26183 - 26238 1.1 - Term 26170 - 26225 1.1 22 11 Tu 1 . - CDS 26271 - 26759 689 ## COG2190 Phosphotransferase system IIA components - Prom 26790 - 26849 8.0 + Prom 26774 - 26833 5.8 23 12 Op 1 . + CDS 26988 - 27704 828 ## COG0036 Pentose-5-phosphate-3-epimerase 24 12 Op 2 . + CDS 27673 - 28359 687 ## COG1284 Uncharacterized conserved protein + Term 28534 - 28565 3.4 25 13 Tu 1 . - CDS 28430 - 28924 182 ## COG0675 Transposase and inactivated derivatives + Prom 29184 - 29243 5.8 26 14 Op 1 . + CDS 29308 - 30162 1015 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 27 14 Op 2 . + CDS 30164 - 30841 636 ## COG5587 Uncharacterized conserved protein + Term 31003 - 31053 2.2 - Term 30991 - 31041 9.8 28 15 Op 1 . - CDS 31077 - 31778 658 ## COG0036 Pentose-5-phosphate-3-epimerase 29 15 Op 2 . - CDS 31842 - 32834 894 ## COG1609 Transcriptional regulators - Prom 32870 - 32929 5.8 - Term 33226 - 33270 3.1 30 16 Op 1 . - CDS 33415 - 34422 584 ## gi|293399870|ref|ZP_06644016.1| hypothetical protein HMPREF0863_00153 31 16 Op 2 . - CDS 34419 - 35087 572 ## COG1131 ABC-type multidrug transport system, ATPase component 32 16 Op 3 . - CDS 35065 - 35697 682 ## EUBREC_0081 hypothetical protein - Prom 35769 - 35828 4.8 - Term 35847 - 35888 8.3 33 17 Op 1 . - CDS 35903 - 36415 754 ## COG1528 Ferritin-like protein - Prom 36437 - 36496 9.6 34 17 Op 2 1/0.167 - CDS 36514 - 37947 1646 ## COG0513 Superfamily II DNA and RNA helicases - Prom 37974 - 38033 6.0 35 18 Tu 1 . - CDS 38719 - 40113 1429 ## COG0534 Na+-driven multidrug efflux pump - Prom 40134 - 40193 4.9 + Prom 40194 - 40253 7.4 36 19 Tu 1 . + CDS 40279 - 41268 887 ## COG3191 L-aminopeptidase/D-esterase 37 20 Tu 1 . - CDS 41334 - 43214 1158 ## COG3410 Uncharacterized conserved protein - Prom 43253 - 43312 9.8 + Prom 43157 - 43216 6.1 38 21 Tu 1 . + CDS 43351 - 45717 978 ## COG1203 Predicted helicases 39 22 Op 1 . + CDS 46232 - 46972 383 ## Dtox_3650 CRISPR-associated protein Cas5 family 40 22 Op 2 . + CDS 46956 - 48836 543 ## Dtox_3649 CRISPR-associated protein, Csd1 family 41 22 Op 3 2/0.100 + CDS 48833 - 49678 372 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair 42 22 Op 4 12/0.000 + CDS 49695 - 50333 110 ## COG1468 RecB family exonuclease 43 22 Op 5 13/0.000 + CDS 50330 - 51361 261 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 44 22 Op 6 . + CDS 51368 - 51661 129 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair + Term 51749 - 51798 6.4 45 23 Op 1 . - CDS 52773 - 53453 140 ## GALLO_1094 hypothetical protein 46 23 Op 2 . - CDS 53446 - 53616 194 ## - Term 54366 - 54403 5.5 47 24 Tu 1 . - CDS 54406 - 55914 2034 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 56160 - 56219 5.9 48 25 Tu 1 . - CDS 56378 - 58072 1904 ## COG1164 Oligoendopeptidase F - Prom 58096 - 58155 4.5 - Term 58311 - 58363 -0.9 49 26 Op 1 2/0.100 - CDS 58423 - 59445 543 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 50 26 Op 2 . - CDS 59429 - 60319 1267 ## COG1281 Disulfide bond chaperones of the HSP33 family - Prom 60344 - 60403 5.7 - Term 60453 - 60491 2.1 51 27 Op 1 . - CDS 60507 - 60962 587 ## Sterm_2242 hypothetical protein 52 27 Op 2 . - CDS 60976 - 61584 746 ## COG3601 Predicted membrane protein - Prom 61817 - 61876 8.1 + Prom 61821 - 61880 6.1 53 28 Tu 1 . + CDS 62123 - 63022 1023 ## LA_1827 hypothetical protein + Term 63042 - 63105 3.1 - Term 63033 - 63088 6.2 54 29 Op 1 3/0.000 - CDS 63228 - 64316 1017 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 64364 - 64423 2.5 - Term 64439 - 64471 5.4 55 29 Op 2 . - CDS 64513 - 65331 1000 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 56 29 Op 3 13/0.000 - CDS 65344 - 66189 1152 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 57 29 Op 4 13/0.000 - CDS 66191 - 66964 1012 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC - Prom 67001 - 67060 2.2 58 29 Op 5 9/0.000 - CDS 67072 - 67566 734 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 59 29 Op 6 . - CDS 67572 - 67991 492 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 68230 - 68289 4.9 + Prom 68017 - 68076 5.6 60 30 Tu 1 . + CDS 68166 - 70121 2062 ## COG3711 Transcriptional antiterminator + Term 70216 - 70262 1.3 - Term 70261 - 70300 4.4 61 31 Tu 1 . - CDS 70310 - 71683 1405 ## COG0534 Na+-driven multidrug efflux pump - Prom 71739 - 71798 7.1 - Term 71874 - 71911 -0.9 62 32 Tu 1 . - CDS 71996 - 72775 843 ## CPE0727 hypothetical protein - Prom 72935 - 72994 4.0 63 33 Op 1 . - CDS 73320 - 73739 516 ## CDR20291_1132 hypothetical protein 64 33 Op 2 3/0.000 - CDS 73709 - 74623 201 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 65 33 Op 3 . - CDS 74616 - 75491 991 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 75511 - 75570 3.1 - Term 75883 - 75920 1.4 66 34 Tu 1 . - CDS 75927 - 76694 788 ## COG1940 Transcriptional regulator/sugar kinase 67 35 Tu 1 . - CDS 76823 - 78196 1413 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 78245 - 78304 2.4 68 36 Op 1 . - CDS 78429 - 79232 936 ## COG1737 Transcriptional regulators 69 36 Op 2 1/0.167 - CDS 79265 - 81874 2340 ## COG0383 Alpha-mannosidase 70 36 Op 3 7/0.000 - CDS 81888 - 82340 585 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 71 36 Op 4 . - CDS 82353 - 83825 1858 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 83969 - 84028 7.2 - Term 84227 - 84271 5.6 72 37 Op 1 11/0.000 - CDS 84279 - 86303 1280 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 73 37 Op 2 10/0.000 - CDS 86324 - 86863 734 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 74 37 Op 3 . - CDS 86891 - 88102 1365 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 88159 - 88218 5.5 75 38 Op 1 . - CDS 88279 - 89049 609 ## EUBREC_1596 hypothetical protein 76 38 Op 2 . - CDS 89141 - 89410 202 ## EUBREC_0955 hypothetical protein 77 38 Op 3 . - CDS 89476 - 89763 225 ## CLH_3192 hypothetical protein - Prom 89829 - 89888 3.8 - Term 89831 - 89865 -0.9 78 39 Tu 1 . - CDS 89893 - 90075 154 ## gi|218281524|ref|ZP_03487953.1| hypothetical protein EUBIFOR_00518 - Prom 90116 - 90175 5.7 - Term 90251 - 90286 1.3 79 40 Tu 1 . - CDS 90307 - 90768 290 ## - Prom 90912 - 90971 6.7 80 41 Tu 1 . - CDS 91062 - 92930 2063 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit - Prom 92971 - 93030 2.2 81 42 Tu 1 . - CDS 93094 - 93663 616 ## gi|160916163|ref|ZP_02078370.1| hypothetical protein EUBDOL_02190 - Prom 93868 - 93927 7.3 82 43 Op 1 . - CDS 94127 - 95227 1234 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 83 43 Op 2 . - CDS 95250 - 96236 1263 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 96380 - 96439 7.4 84 44 Op 1 . - CDS 96498 - 97121 726 ## COG0739 Membrane proteins related to metalloendopeptidases 85 44 Op 2 . - CDS 97170 - 98111 836 ## COG2385 Sporulation protein and related proteins 86 44 Op 3 7/0.000 - CDS 98155 - 99735 1872 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 87 44 Op 4 . - CDS 99741 - 101414 1899 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 88 44 Op 5 . - CDS 101477 - 101680 370 ## + Prom 102295 - 102354 8.3 89 45 Tu 1 . + CDS 102378 - 103352 908 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 103622 - 103681 8.1 90 46 Tu 1 . + CDS 103708 - 105198 385 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 105389 - 105448 7.1 - Term 105385 - 105425 6.1 91 47 Op 1 . - CDS 105475 - 105945 462 ## COG0757 3-dehydroquinate dehydratase II 92 47 Op 2 . - CDS 105956 - 106330 424 ## BMD_3606 hypothetical protein 93 47 Op 3 . - CDS 106335 - 107291 1218 ## COG1893 Ketopantoate reductase 94 47 Op 4 . - CDS 107307 - 107765 407 ## COG2030 Acyl dehydratase - Term 107792 - 107836 1.1 95 48 Tu 1 . - CDS 107878 - 109461 1843 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase - Prom 109481 - 109540 9.2 + Prom 109523 - 109582 6.3 96 49 Tu 1 . + CDS 109643 - 110515 691 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 110766 - 110824 -0.9 97 50 Op 1 . - CDS 110914 - 111762 725 ## Slin_2404 protein of unknown function DUF34 98 50 Op 2 . - CDS 111784 - 112542 514 ## COG2365 Protein tyrosine/serine phosphatase 99 50 Op 3 . - CDS 112547 - 113347 697 ## SSON_1293 hypothetical protein - Term 113403 - 113441 5.2 100 51 Op 1 . - CDS 113450 - 113872 566 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 101 51 Op 2 . - CDS 113869 - 115095 1171 ## JDM1_2587 hypothetical protein 102 51 Op 3 13/0.000 - CDS 115112 - 115912 818 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 103 51 Op 4 13/0.000 - CDS 115905 - 116684 1064 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 104 51 Op 5 . - CDS 116698 - 117177 564 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 117311 - 117370 3.6 105 52 Op 1 . - CDS 117410 - 120139 2996 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 106 52 Op 2 . - CDS 120145 - 120882 751 ## COG3394 Uncharacterized protein conserved in bacteria - Prom 120902 - 120961 2.9 107 53 Tu 1 . - CDS 121524 - 122729 898 ## COG3307 Lipid A core - O-antigen ligase and related enzymes - Prom 122756 - 122815 10.4 - Term 122939 - 122968 -0.9 108 54 Tu 1 . - CDS 122969 - 124312 1243 ## gi|293399930|ref|ZP_06644076.1| hypothetical protein HMPREF0863_00213 - Term 124639 - 124667 -1.0 109 55 Op 1 . - CDS 124668 - 124952 398 ## Elen_2980 hypothetical protein 110 55 Op 2 . - CDS 124986 - 125423 162 ## Cbei_1498 hypothetical protein 111 55 Op 3 . - CDS 125420 - 126067 914 ## COG0681 Signal peptidase I - Prom 126091 - 126150 7.5 + Prom 126088 - 126147 8.1 112 56 Op 1 5/0.000 + CDS 126278 - 127378 1030 ## COG2202 FOG: PAS/PAC domain 113 56 Op 2 . + CDS 127418 - 128935 736 ## COG2199 FOG: GGDEF domain + Term 129045 - 129096 7.5 114 57 Op 1 1/0.167 - CDS 129647 - 131017 628 ## COG0534 Na+-driven multidrug efflux pump - Prom 131039 - 131098 4.7 115 57 Op 2 . - CDS 131117 - 131779 588 ## COG0274 Deoxyribose-phosphate aldolase 116 57 Op 3 13/0.000 - CDS 131838 - 132677 850 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 117 57 Op 4 13/0.000 - CDS 132664 - 133437 829 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 118 57 Op 5 9/0.000 - CDS 133453 - 133926 474 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 119 57 Op 6 . - CDS 133941 - 134357 285 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 120 57 Op 7 . - CDS 134354 - 135199 611 ## COG1082 Sugar phosphate isomerases/epimerases 121 57 Op 8 . - CDS 135196 - 135846 301 ## COG0637 Predicted phosphatase/phosphohexomutase 122 57 Op 9 7/0.000 - CDS 135850 - 136881 868 ## COG2222 Predicted phosphosugar isomerases - Prom 137030 - 137089 4.7 123 57 Op 10 1/0.167 - CDS 137399 - 138130 420 ## COG2188 Transcriptional regulators 124 57 Op 11 . - CDS 138141 - 138842 492 ## COG2188 Transcriptional regulators - Prom 138908 - 138967 6.0 125 58 Tu 1 . - CDS 139374 - 139763 125 ## gi|160931939|ref|ZP_02079331.1| hypothetical protein CLOLEP_00772 - Prom 139964 - 140023 6.0 - Term 139997 - 140041 3.1 126 59 Op 1 32/0.000 - CDS 140075 - 140587 558 ## COG0440 Acetolactate synthase, small (regulatory) subunit 127 59 Op 2 . - CDS 140622 - 142343 1900 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 142571 - 142630 6.9 - Term 142519 - 142573 7.3 128 60 Tu 1 . - CDS 142634 - 143503 981 ## COG0024 Methionine aminopeptidase - Prom 143610 - 143669 5.9 + Prom 143637 - 143696 4.1 129 61 Tu 1 . + CDS 143716 - 145395 940 ## CLL_A2076 hypothetical protein + Term 145411 - 145442 3.4 - Term 145399 - 145430 3.4 130 62 Tu 1 . - CDS 145442 - 146329 949 ## BL0781 hypothetical protein - Prom 146413 - 146472 10.8 - Term 146739 - 146791 11.1 131 63 Op 1 3/0.000 - CDS 146812 - 147699 1054 ## COG0191 Fructose/tagatose bisphosphate aldolase 132 63 Op 2 . - CDS 147718 - 148761 893 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 133 63 Op 3 . - CDS 148754 - 149914 1046 ## COG1454 Alcohol dehydrogenase, class IV 134 63 Op 4 13/0.000 - CDS 149926 - 150762 786 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 135 63 Op 5 13/0.000 - CDS 150759 - 151514 748 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 136 63 Op 6 9/0.000 - CDS 151530 - 152012 493 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 137 63 Op 7 . - CDS 152015 - 152416 432 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 152579 - 152638 6.9 + Prom 152596 - 152655 7.8 138 64 Tu 1 . + CDS 152692 - 155127 1252 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 155208 - 155243 -0.6 + Prom 155341 - 155400 9.4 139 65 Tu 1 . + CDS 155429 - 156748 577 ## COG1373 Predicted ATPase (AAA+ superfamily) + Term 156808 - 156842 -0.9 - Term 156836 - 156888 8.4 140 66 Op 1 . - CDS 156895 - 158565 1945 ## COG2759 Formyltetrahydrofolate synthetase 141 66 Op 2 . - CDS 158617 - 159849 1515 ## COG0151 Phosphoribosylamine-glycine ligase - Prom 160002 - 160061 5.6 - Term 159877 - 159931 6.1 142 67 Op 1 . - CDS 160068 - 160778 501 ## 143 67 Op 2 . - CDS 160765 - 161478 309 ## gi|293399801|ref|ZP_06643947.1| conserved hypothetical protein 144 67 Op 3 . - CDS 161490 - 162233 590 ## 145 67 Op 4 . - CDS 162230 - 162925 555 ## gi|293399801|ref|ZP_06643947.1| conserved hypothetical protein 146 67 Op 5 . - CDS 162938 - 163384 412 ## COG3279 Response regulator of the LytR/AlgR family - Prom 163447 - 163506 4.1 + Prom 163479 - 163538 9.4 147 68 Op 1 . + CDS 163558 - 163767 172 ## COG1476 Predicted transcriptional regulators 148 68 Op 2 . + CDS 163788 - 164180 316 ## + Prom 164306 - 164365 4.0 149 69 Tu 1 . + CDS 164404 - 165510 646 ## HCH_00659 alpha/beta fold family hydrolase + Term 165579 - 165618 2.9 - Term 166055 - 166084 -0.2 150 70 Tu 1 . - CDS 166088 - 166435 398 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Prom 166485 - 166544 5.8 151 71 Tu 1 . - CDS 166744 - 167421 479 ## COG1309 Transcriptional regulator - Prom 167480 - 167539 2.5 + Prom 167381 - 167440 3.8 152 72 Op 1 . + CDS 167478 - 167990 200 ## COG0655 Multimeric flavodoxin WrbA 153 72 Op 2 . + CDS 167990 - 168613 299 ## CDR20291_3070 hypothetical protein + Term 168750 - 168796 2.3 - Term 168707 - 168739 1.7 154 73 Tu 1 . - CDS 168807 - 170036 1400 ## COG1078 HD superfamily phosphohydrolases - Prom 170056 - 170115 9.0 - Term 170143 - 170182 4.0 155 74 Op 1 . - CDS 170196 - 171365 847 ## COG0226 ABC-type phosphate transport system, periplasmic component 156 74 Op 2 . - CDS 171362 - 171751 311 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 157 74 Op 3 . - CDS 171754 - 172512 536 ## CLI_0521 hypothetical protein + Prom 172593 - 172652 4.4 158 75 Op 1 . + CDS 172673 - 173665 1143 ## COG0673 Predicted dehydrogenases and related proteins 159 75 Op 2 . + CDS 173662 - 174027 275 ## gi|293399810|ref|ZP_06643956.1| conserved hypothetical protein + Term 174152 - 174185 2.9 160 76 Op 1 . - CDS 174310 - 175416 820 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 161 76 Op 2 . - CDS 175413 - 176189 774 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes - Prom 176306 - 176365 2.7 - Term 176361 - 176409 7.0 162 77 Op 1 7/0.000 - CDS 176417 - 177493 1020 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 163 77 Op 2 10/0.000 - CDS 177507 - 178781 1481 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 164 77 Op 3 13/0.000 - CDS 178805 - 179104 436 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 165 77 Op 4 . - CDS 179094 - 179579 571 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 166 77 Op 5 . - CDS 179639 - 182509 2498 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 182588 - 182647 8.3 - Term 182765 - 182807 6.1 167 78 Op 1 . - CDS 182815 - 183372 440 ## 168 78 Op 2 . - CDS 183356 - 183499 134 ## 169 78 Op 3 9/0.000 - CDS 183519 - 184781 666 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 184801 - 184860 4.9 - Term 185522 - 185567 1.2 170 78 Op 4 . - CDS 185678 - 186376 770 ## COG3279 Response regulator of the LytR/AlgR family 171 78 Op 5 . - CDS 186408 - 188009 1713 ## COG0405 Gamma-glutamyltransferase - Prom 188108 - 188167 4.7 + Prom 188067 - 188126 7.9 172 79 Op 1 7/0.000 + CDS 188153 - 188701 727 ## COG2059 Chromate transport protein ChrA 173 79 Op 2 . + CDS 188698 - 189255 531 ## COG2059 Chromate transport protein ChrA + Term 189407 - 189453 5.7 - Term 189646 - 189688 -0.4 174 80 Tu 1 . - CDS 189711 - 191003 712 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 191074 - 191133 14.7 175 81 Tu 1 . - CDS 191273 - 191725 164 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 191773 - 191832 3.5 176 82 Op 1 . - CDS 191834 - 193183 1311 ## COG0534 Na+-driven multidrug efflux pump - Term 193195 - 193233 6.1 177 82 Op 2 . - CDS 193240 - 193704 574 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 193826 - 193885 4.0 + Prom 193880 - 193939 6.4 178 83 Tu 1 . + CDS 194027 - 194905 794 ## CKR_0223 hypothetical protein + Term 195031 - 195073 -0.7 - Term 195018 - 195062 8.1 179 84 Tu 1 . - CDS 195069 - 197144 2078 ## COG3711 Transcriptional antiterminator - Prom 197171 - 197230 4.7 - Term 197247 - 197286 2.7 180 85 Op 1 . - CDS 197313 - 197963 791 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 181 85 Op 2 . - CDS 197989 - 198471 410 ## Apar_1283 hypothetical protein 182 85 Op 3 . - CDS 198495 - 199385 1250 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 183 85 Op 4 . - CDS 199386 - 200000 901 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 184 85 Op 5 . - CDS 200005 - 200766 850 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase - Term 200780 - 200815 3.3 185 86 Op 1 . - CDS 200826 - 202115 1471 ## COG3037 Uncharacterized protein conserved in bacteria 186 86 Op 2 . - CDS 202164 - 202439 513 ## Apar_1285 phosphotransferase system lactose/cellobiose-specific IIB subunit 187 86 Op 3 . - CDS 202458 - 202898 566 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 202934 - 202993 5.9 - Term 203279 - 203318 2.3 188 87 Tu 1 . - CDS 203332 - 203628 427 ## gi|160914970|ref|ZP_02077184.1| hypothetical protein EUBDOL_00978 - Prom 203668 - 203727 6.8 189 88 Op 1 . - CDS 203753 - 204307 760 ## COG1695 Predicted transcriptional regulators 190 88 Op 2 . - CDS 204375 - 205661 1228 ## gi|293399814|ref|ZP_06643960.1| conserved hypothetical protein - Prom 205681 - 205740 5.3 + Prom 205636 - 205695 4.6 191 89 Op 1 . + CDS 205769 - 207253 1455 ## COG4193 Beta- N-acetylglucosaminidase 192 89 Op 2 . + CDS 207292 - 207957 769 ## Sterm_2682 HAD-superfamily hydrolase, subfamily IA, variant 3 193 90 Op 1 . - CDS 208319 - 209071 742 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 194 90 Op 2 . - CDS 209068 - 209538 194 ## 195 90 Op 3 . - CDS 209538 - 210239 714 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 210264 - 210323 5.2 196 91 Op 1 . - CDS 210352 - 211116 607 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 197 91 Op 2 . - CDS 211119 - 211277 70 ## - Prom 211478 - 211537 7.1 198 92 Op 1 . + CDS 211432 - 214191 2140 ## COG3933 Transcriptional antiterminator 199 92 Op 2 13/0.000 + CDS 214260 - 214730 496 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB + Prom 214733 - 214792 2.8 200 92 Op 3 13/0.000 + CDS 214814 - 215563 991 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 201 92 Op 4 3/0.000 + CDS 215556 - 216377 778 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 202 92 Op 5 . + CDS 216379 - 217512 541 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 203 92 Op 6 . + CDS 217516 - 217905 274 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Prom 217984 - 218043 4.9 204 93 Op 1 . + CDS 218095 - 218661 305 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 205 93 Op 2 . + CDS 218633 - 219349 230 ## gi|293402416|ref|ZP_06646552.1| conserved hypothetical protein 206 93 Op 3 . + CDS 219334 - 220206 807 ## COG1131 ABC-type multidrug transport system, ATPase component 207 93 Op 4 . + CDS 220203 - 221435 1034 ## gi|293402414|ref|ZP_06646550.1| hypothetical protein HMPREF0863_02691 208 93 Op 5 . + CDS 221472 - 221663 97 ## + Prom 221679 - 221738 4.4 209 94 Tu 1 . + CDS 221767 - 221955 142 ## + Term 222066 - 222116 8.9 210 95 Op 1 2/0.100 - CDS 222259 - 223512 1340 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 211 95 Op 2 . - CDS 223529 - 224929 1518 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 212 95 Op 3 . - CDS 224926 - 225108 91 ## COG1072 Panthothenate kinase - Prom 225199 - 225258 1.9 213 96 Op 1 . - CDS 225312 - 225677 375 ## COG1072 Panthothenate kinase 214 96 Op 2 . - CDS 225674 - 226102 480 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Prom 226100 - 226159 3.3 215 97 Tu 1 . + CDS 226296 - 228326 1371 ## COG3711 Transcriptional antiterminator + Term 228355 - 228393 -0.4 216 98 Op 1 2/0.100 - CDS 228494 - 229918 1396 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 217 98 Op 2 13/0.000 - CDS 229918 - 230265 476 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 218 98 Op 3 10/0.000 - CDS 230258 - 231499 1367 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 219 98 Op 4 . - CDS 231504 - 231824 505 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 231979 - 232038 6.2 + Prom 231882 - 231941 5.7 220 99 Tu 1 . + CDS 232015 - 233895 1230 ## COG3711 Transcriptional antiterminator + Prom 233970 - 234029 8.7 221 100 Tu 1 . + CDS 234209 - 234967 782 ## COG1349 Transcriptional regulators of sugar metabolism 222 101 Op 1 13/0.000 - CDS 235354 - 236244 1163 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 223 101 Op 2 . - CDS 236246 - 237076 898 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC - Prom 237179 - 237238 8.1 - Term 237712 - 237743 -0.7 224 102 Tu 1 . - CDS 237774 - 238505 739 ## COG0274 Deoxyribose-phosphate aldolase - Prom 238540 - 238599 13.6 - Term 238837 - 238875 4.4 225 103 Op 1 . - CDS 238890 - 239429 519 ## COG1592 Rubrerythrin 226 103 Op 2 . - CDS 239466 - 239885 251 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 239911 - 239970 3.7 227 104 Tu 1 . - CDS 239990 - 240478 747 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Prom 240499 - 240558 7.2 + Prom 240586 - 240645 7.6 228 105 Op 1 . + CDS 240674 - 241435 1012 ## gi|293399819|ref|ZP_06643965.1| conserved hypothetical protein + Term 241444 - 241483 1.1 229 105 Op 2 . + CDS 241502 - 242353 918 ## gi|293399820|ref|ZP_06643966.1| hypothetical protein HMPREF0863_00103 + Term 242478 - 242524 9.5 + Prom 242355 - 242414 3.8 230 106 Op 1 1/0.167 + CDS 242537 - 243100 807 ## COG1971 Predicted membrane protein 231 106 Op 2 . + CDS 243172 - 244437 1339 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Term 244602 - 244630 -0.9 - Term 244696 - 244731 1.1 232 107 Tu 1 . - CDS 244763 - 245191 532 ## TDE0191 acetyltransferase - Prom 245340 - 245399 5.1 + Prom 245148 - 245207 5.6 233 108 Tu 1 . + CDS 245397 - 246482 921 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Term 246549 - 246596 1.2 234 109 Op 1 . - CDS 247011 - 247763 419 ## PROTEIN SUPPORTED gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase 235 109 Op 2 . - CDS 247760 - 248476 281 ## Bmur_1780 hypothetical protein 236 109 Op 3 . - CDS 248522 - 249259 760 ## COG2188 Transcriptional regulators - Prom 249281 - 249340 7.0 - Term 249417 - 249454 1.1 237 110 Op 1 . - CDS 249474 - 250319 543 ## COG2055 Malate/L-lactate dehydrogenases 238 110 Op 2 . - CDS 250292 - 250462 171 ## COG2055 Malate/L-lactate dehydrogenases 239 111 Op 1 . - CDS 250573 - 251355 739 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 240 111 Op 2 . - CDS 251352 - 252551 1048 ## COG1929 Glycerate kinase - Prom 252627 - 252686 7.8 + Prom 252566 - 252625 8.2 241 112 Tu 1 . + CDS 252674 - 253780 1016 ## COG3835 Sugar diacid utilization regulator + Term 253812 - 253869 1.1 - Term 253654 - 253707 -0.9 242 113 Op 1 . - CDS 253950 - 254297 143 ## MYPE4220 hypothetical protein - Prom 254341 - 254400 6.1 243 113 Op 2 . - CDS 254402 - 255178 470 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 255213 - 255272 10.4 - Term 255333 - 255372 4.3 244 114 Op 1 1/0.167 - CDS 255405 - 256271 964 ## COG0191 Fructose/tagatose bisphosphate aldolase 245 114 Op 2 1/0.167 - CDS 256292 - 257146 939 ## COG0191 Fructose/tagatose bisphosphate aldolase 246 114 Op 3 7/0.000 - CDS 257165 - 258253 1255 ## COG1299 Phosphotransferase system, fructose-specific IIC component 247 114 Op 4 8/0.000 - CDS 258275 - 258586 500 ## COG1445 Phosphotransferase system fructose-specific component IIB - Prom 258610 - 258669 4.2 248 114 Op 5 5/0.000 - CDS 258721 - 259176 770 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 249 114 Op 6 . - CDS 259251 - 261215 2278 ## COG3711 Transcriptional antiterminator 250 114 Op 7 1/0.167 - CDS 261240 - 262130 322 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 262150 - 262209 9.1 - Term 262242 - 262297 8.1 251 115 Op 1 . - CDS 262331 - 263803 1338 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 252 115 Op 2 . - CDS 263821 - 264018 306 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 253 115 Op 3 . - CDS 264085 - 265260 818 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 254 115 Op 4 . - CDS 265272 - 265721 343 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 265759 - 265818 7.2 - Term 265977 - 266019 3.1 255 116 Tu 1 . - CDS 266061 - 267638 1653 ## COG0696 Phosphoglyceromutase - Prom 267658 - 267717 7.7 256 117 Tu 1 . - CDS 267741 - 268682 1048 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 268713 - 268772 7.5 257 118 Tu 1 . + CDS 269033 - 269941 939 ## LA_1827 hypothetical protein + Term 269961 - 270011 7.9 - Term 270354 - 270388 2.3 258 119 Op 1 . - CDS 270390 - 271007 713 ## COG1971 Predicted membrane protein 259 119 Op 2 . - CDS 271076 - 271642 495 ## CDR20291_3456 hypothetical protein - Prom 271678 - 271737 5.1 - Term 271783 - 271838 -0.4 260 120 Tu 1 . - CDS 271900 - 272586 862 ## gi|293399834|ref|ZP_06643980.1| hypothetical protein HMPREF0863_00117 - Prom 272681 - 272740 6.3 + Prom 272627 - 272686 5.8 261 121 Tu 1 . + CDS 272715 - 273761 1046 ## COG3440 Predicted restriction endonuclease + Term 273875 - 273909 2.9 + Prom 273864 - 273923 6.2 262 122 Op 1 . + CDS 274017 - 274439 543 ## COG0607 Rhodanese-related sulfurtransferase 263 122 Op 2 . + CDS 274444 - 274881 424 ## COG1959 Predicted transcriptional regulator 264 122 Op 3 11/0.000 + CDS 274885 - 275211 390 ## COG0526 Thiol-disulfide isomerase and thioredoxins 265 122 Op 4 . + CDS 275228 - 276154 587 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 266 122 Op 5 12/0.000 + CDS 276209 - 277756 1599 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 267 122 Op 6 . + CDS 277753 - 278481 336 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 279182 - 279241 5.7 268 123 Op 1 . + CDS 279272 - 279742 360 ## COG0716 Flavodoxins 269 123 Op 2 . + CDS 279761 - 280552 471 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Prom 280609 - 280668 4.1 270 124 Tu 1 . + CDS 280911 - 281498 245 ## COG0716 Flavodoxins 271 125 Op 1 . - CDS 282026 - 282637 746 ## LSEI_0329 kinase 272 125 Op 2 . - CDS 282652 - 283383 860 ## COG2188 Transcriptional regulators 273 125 Op 3 . - CDS 283412 - 284197 939 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 274 125 Op 4 9/0.000 - CDS 284224 - 284697 554 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 275 125 Op 5 4/0.000 - CDS 284666 - 285112 469 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 276 125 Op 6 1/0.167 - CDS 285132 - 286790 2035 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 277 125 Op 7 3/0.000 - CDS 286806 - 287810 1011 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 278 125 Op 8 . - CDS 287814 - 288665 909 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 288770 - 288829 7.3 + Prom 288855 - 288914 3.6 279 126 Tu 1 . + CDS 288938 - 289684 805 ## COG1737 Transcriptional regulators Predicted protein(s) >gi|312955264|gb|AENW01000043.1| GENE 1 386 - 1327 528 313 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2198 NR:ns ## KEGG: Cbei_2198 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 8 254 7 240 290 74 28.0 4e-12 MEKESVKDVFLRYGVLLGKRNTERQKTDFLRAAQKQLEQAGFPVDITCVSASLMRRESVN MYNLYAGDFKKADVVFITYYDTPLWQFYPKEQKAFDANWSRGNFLLHTLLFLCCMIAIAA FLYITVIPSLQKHGFVSLWGAVLVLVCLFGFYGIRHMRGGIAAGNTMVRNSSSLIALFAL ACDLSEQEKQHVAFAMIDEGTRSEYGLRMLQEYIGKKRIQRVYLDSIGNVGKLQGFADRH ILEGLHEKLAEHAEWHDLAEDKHAYGDILLTSGSCDNGCVSLKIEKRTDNSDLEQQVIKV IQVLKALMISCVS >gi|312955264|gb|AENW01000043.1| GENE 2 1338 - 2006 666 222 aa, chain - ## HITS:1 COG:TM1254 KEGG:ns NR:ns ## COG: TM1254 COG0637 # Protein_GI_number: 15644010 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Thermotoga maritima # 7 187 2 181 216 88 33.0 1e-17 MISDKTELLIFDMDGLLVDTERVYLEGWLYALNKQQVAIAEAVVKSWVGKSFHDTHAYLM QVCHEEALCARIRKDREQYIYQCLENGTLSAMPYARDALQAAREYGYRTGLATSSLKKRS TAILAHLGLLSYLDIPVFADDVTKLKPHPDLYLEVLRRAQVPCEHAAAFEDSLTGVQAAV AAGIQTVRIPDHRFIDVEDTASDVVCAENLSCVRAMLEQLNT >gi|312955264|gb|AENW01000043.1| GENE 3 1993 - 2640 805 215 aa, chain - ## HITS:1 COG:CAC2973 KEGG:ns NR:ns ## COG: CAC2973 COG0800 # Protein_GI_number: 15896226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Clostridium acetobutylicum # 1 206 1 205 213 204 49.0 8e-53 MDKTTLLAELKKQRLVAVIRGKDEEEVTNIVDAVYRGGIHFMEITYTIPQAEQVIAHLCK AYEHCDDIIIGAGTCLDIVSARMAISAGAQFVVCPHLDTEVMKLCNSYRVPCFPGAANVK DMLECLRYGADVIKLFPGDTFGPKAVRAFKGPLPQADFMPTGGVSAANLTEWLDNGAVAV GTGGSLTKGAKAGDFEAVRLEAEKLVNIVRAYDQR >gi|312955264|gb|AENW01000043.1| GENE 4 2675 - 3604 968 309 aa, chain - ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 36 303 27 298 524 194 39.0 1e-49 MKKVLITPRSFGKYNREELIEKLLQHGIEPVFNPYGTIMNEQQMRSALQDMDGLIVGVDP VSEEALRQAPRLRAIAKYGVGIDNIACAYAQENDIAISRTVNANANAVADYAMTLLMSVA RRVVEIDEGCHHNDWSKKEALDIYGKTIGVLGLGAIGKGVVQRASGFDMRIYGYDIMRDD AFLNKYNVCFTDVDTIIRECDFISLHLPLTQETRHILNKENLKRAKSNLIIVNTARGGLL DEDALYELLKERKLYGLGLDVFEQEPPQNSKLLTLPNVIVSSHTAASTQEAINAMSRMAV ENLICSLEA >gi|312955264|gb|AENW01000043.1| GENE 5 3604 - 4035 508 143 aa, chain - ## HITS:1 COG:lin0777 KEGG:ns NR:ns ## COG: lin0777 COG2893 # Protein_GI_number: 16799851 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Listeria innocua # 2 142 3 142 144 93 37.0 1e-19 MIGMLLVSHGRMAEGMLDSLELIMGSCDRMHTVSLCAGEDFESFRVKVMEAIRQLDSGDG VLVFVDLYGASPFNASVYAVARMAQEGISVRVLAGMNLAMLLETAAMRASSSLQELVAIA EAAGRDGISEPLVVKEEENGEDY >gi|312955264|gb|AENW01000043.1| GENE 6 4032 - 4538 671 168 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 163 1 161 161 88 31.0 5e-18 MGKVVLARVDARLIHGQVMTSLSKSAGATAIFVADDPAAHDPFTKNIILGAGSRTGLKVR VLKEDGAVRYWNDRQYDDYHVILLTKSIEVMADIIRGGVPMKELNLGGIPQKPGLTSIIK EVAINKEQLKILQELEKDYGIDVYFQAIPSSRRVSLKEAARLFEEHSA >gi|312955264|gb|AENW01000043.1| GENE 7 4557 - 5417 1124 286 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 12 286 17 286 286 162 35.0 6e-40 MSEMLQKSVNLEPEAITKRDVSLAWLRFYFANEIPHSFDKYIAPSLMWALMPILKKLYKD KKDLSEAYQRHLLFFNTQISWGGGTITGIMASLEAARAQEVYMDTPVTIDDDLIYNTKAG LMGALAGIGDSIDSGTIQYIFIAIALPWAQQGNAIGALFPFVMFSLYQLVIGYYFAQLGF KLGRTAATEVVGTKMQIIIEALSILGLFMMGILAANYVKVSSTLAFTLSGKKFVIQEILD GVMPGILPLLTVGLVYFYFTKKGLNVTKALIGLTIILGVLAGFGIL >gi|312955264|gb|AENW01000043.1| GENE 8 5447 - 6268 951 273 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 20 245 17 238 249 122 35.0 7e-28 MQITIVQAVVISIWIGLVMSRSFLGGATTTLRFTPMMTGLIVGLVFGRVAEAMIITAAIQ LIYMGVFSPGGQMPSEPAIAAAIAVPVALLGDMKPEAAIAVAVPVGLLGSYLYQFRFFVN TFVMQKFTDKYAKSANDKMLTISIIFIPILVAFLIFVPFMFVSLYYGAPVIADIVQSTSG SILFHILEVIGGGLASIGIAVTIYVIGKKNYIAFFLLAYFVAVVLKSLNITMITYAIIGT IIAFIFVLSKTEAVSMFSASGINTADNEEEDDY >gi|312955264|gb|AENW01000043.1| GENE 9 6294 - 7187 829 297 aa, chain - ## HITS:1 COG:BH2674 KEGG:ns NR:ns ## COG: BH2674 COG1023 # Protein_GI_number: 15615237 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted 6-phosphogluconate dehydrogenase # Organism: Bacillus halodurans # 1 293 1 293 298 328 54.0 7e-90 METGIIGLGKMGLHIAMNMQSSGIRAYGYDIQTGPRKQAKAKGIPVVQTLQELIAALQKP RIIWLMLPAGDITESMVHQLAELLEEGDYVIDGGNSFYRDSLRNYEFLKKKKIHFYDAGT SGGIRGALEGANFMIGGEREHFAVIEELFQRIASDQGYLYAGDAGSGHYLKMVHNGIEYG MMQAIGEGFELLQHSPYPYDNAQVARLWNHGSVIRSWLMKLAEEAFREDEKLDAVKGIMY ASGEGQWTVEEAMRCNVSVPVISTALMMRYRSLYEDTFTGKVVASLRKGFGGHKTAE >gi|312955264|gb|AENW01000043.1| GENE 10 7601 - 8446 785 281 aa, chain + ## HITS:1 COG:L54944 KEGG:ns NR:ns ## COG: L54944 COG1737 # Protein_GI_number: 15674168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 280 1 281 282 231 41.0 1e-60 MSMEFAGRVKGHYYGLSKTEKKIADYLLEHATTARHLSIQELAEDIDVSMSAISRFTKKV GYSNYQEMRLQLSEPFDHLSESFFASLDENDTAMNIAKATFQSGITSLSSTMAVLNQDSL EQAVHLLGRAKTCGLFGMGASSVIVHSAYQRFLRTSLNCQFSLDYHMQLMYAGRLSEKDC ALIVSHTGRNKDVLRIVDILKEHGVPIISVTSNAASPLARKSDVFLFSISEETKFRPEAI SSSVSQLMLMDTLFTLYAIKEDNDPEYFNRIRRIVNTTRIP >gi|312955264|gb|AENW01000043.1| GENE 11 8762 - 9952 648 396 aa, chain + ## HITS:1 COG:BS_yodJ KEGG:ns NR:ns ## COG: BS_yodJ COG1876 # Protein_GI_number: 16079020 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 197 382 79 266 273 143 40.0 7e-34 MKRRKRVKRKVKIAAVIVLLICIAVSLIIINRTRIQLAFKGYDRDERNIIMTLSAQEIDE YVSFASDIDISKWNRMKNNKHYLDYELYAENGADKKEAVAYVDQFYADYYQALRSQGFDQ PTLRTLMKKTSLADFKTIKDKKLTWKQIQPYIHINGRILEDVPDYLKSGLKPLEAVMRIS YASINSSAPITIQRSYSLDDPKHLLLMIKRGFYVPKTYVPENLTAVQIPVAHNDGNNLMR KDAADALESMYKDAKKQGLILAINSAYRPYNEQQQVYDEYMVTYGVQTAVKLVAEPGCSE HQLGLSVDLTSQSVMDGTYAVFGDTPEYQWVIKNAHKYGFILRYPENKTNITGTANEPWH FRYVGTEAATEIYRKNLCLEEYTLQHGFSYPVSIKR >gi|312955264|gb|AENW01000043.1| GENE 12 10950 - 12824 1741 624 aa, chain - ## HITS:1 COG:lin2942 KEGG:ns NR:ns ## COG: lin2942 COG0445 # Protein_GI_number: 16802001 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Listeria innocua # 3 616 10 623 629 651 53.0 0 MVDVIVIGGGHAGVEAALACARLKKTTILYSMHIDMIASMPCNPSVGGPAKGIVVREIDA LGGEMGKAADATALQFKMLNTTKGPGVQCLRVQSDKLEYKRYMQDKLLQQEHLEIREMCV EEVLAKDGRISGVRQKDGTVVNCRALIMTTGTFMSSTVLVGHTSTLSGPEDEPTTENLSQ SLRNLGIETFRLKTGTPARVRTASIDFSKTAVQPGTDEFICFSEDTKEIRPFDQQAVCYL TYTTAKTHDIINSNLKRSAMYSGLVKGVGPRYCPSIEDKLVRFADKERHQIFLEPESESL DTTYVQGFSTSMPYDVQEAMLHSLPGLENCTIEKYAYAIEYDAIDPLQCKPTLENKIIEN LYTAGQINGTSGYEEAAAQGLMAGINAVRKLDHKEPLILHRDEAYIGVMIDDLVTKGTKE PYRLLTSRAEYRLLLRHDNADARLSEYGYETGLISDERYARYQKKMQNIEEMISYLASVR FTPKSTVNGLLERLGLDVLKEGISAAELLKRPGITIALLEPYLEREFDPAIAKLVEIEIR YEGYIKKAKRDAEHLRAMDKVCLPERFDYNQVVNLSLEARQKLNKVQPLTMGQASRISGV NPADIAVLAVFMEQLKRTYEKKSG >gi|312955264|gb|AENW01000043.1| GENE 13 12838 - 13173 268 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399750|ref|ZP_06643896.1| ## NR: gi|293399750|ref|ZP_06643896.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 108 1 104 108 71 41.0 2e-11 MKYNNSRLSLKQRWLSFALCILIALLAGIFALYSYIEAYPFWTSACSLLVCAIMLFIAIF LLRLNMRRKRIQREFVSEFDKEIRKKEHMCPHCGALMGSGNTCAKCGYKGH >gi|312955264|gb|AENW01000043.1| GENE 14 14789 - 15499 669 236 aa, chain - ## HITS:1 COG:PA1210 KEGG:ns NR:ns ## COG: PA1210 COG1741 # Protein_GI_number: 15596407 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Pseudomonas aeruginosa # 1 229 1 232 232 174 38.0 9e-44 MMKKIDHRKMGRSCLGWLDSWFHFSFAEYYNPKNMHYGVLRVVNDDTIQPHTGFETHPHR DMEIITYVIEGELTHADSMQNVSTLKRGEIQYMSAGTGVFHSEKNDGEEILRLLQIWILP DRSGYTPQYGEARIPWEARENRLLHIVSGHKNTAYVKIHQDMDIYVSALSSRKELDIPVE PSRQVYLIVIEGEVECNDICLQLRDAVEIDESFCIKTLQGAHVILFDMAREVYFQE >gi|312955264|gb|AENW01000043.1| GENE 15 15790 - 16650 378 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 1 254 16 265 294 150 35 7e-35 MSSYHSVLKNAQARMEEAGYGEQSALLYMLELTNKEAHNLYMEFDEEMQPELEELYEEGI QRLLTGIPLGHVLGFEWFYGYRFTVNEDVLIPRPETEELVANILAAYDEHFSSQDNVMAV DIGTGSGAIAVSLKKEEPNLHMMATDISEQAVAVAKKNADDNEAIVNFMVGDMLQPLIDR NLKVDILISNPPYIPREEEMEHSVVDYEPHVALFGGEDGLKFYRIIFENAAKVLKERAMM AFEMGYNQKEALSEEAKKYFPNARIEVLKDMSGKNRMLFVYLNMEH >gi|312955264|gb|AENW01000043.1| GENE 16 16650 - 17723 1377 357 aa, chain - ## HITS:1 COG:BS_prfA KEGG:ns NR:ns ## COG: BS_prfA COG0216 # Protein_GI_number: 16080754 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Bacillus subtilis # 4 353 1 351 356 339 49.0 4e-93 MSVMIERLEGMVNRYHEINEMMMSPEIVTDSRMLAKLGREQADLTQVVETYTEYKNSVSA LEDAKALLLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGAA GGDEGNIFAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFES GSHRVQRVPKTESQGRIHTSTATVLVTPEIEPEDFDIDMNDLEMETMRASGAGGQHINKT DSAVRIVHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGIERRNKIGT GDRAEKIRTYNYPQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQQAKLAGEK >gi|312955264|gb|AENW01000043.1| GENE 17 18039 - 20315 1551 758 aa, chain - ## HITS:1 COG:no KEGG:Cbei_4159 NR:ns ## KEGG: Cbei_4159 # Name: not_defined # Def: regulatory protein, LuxR # Organism: C.beijerinckii # Pathway: not_defined # 6 754 13 818 822 166 20.0 3e-39 MRQIARKQFNSMLKHMVSYPLICIYGPDGFGKTTAVAAFLHNRKERCCWIHMHKKNRKQL GEIFEKSIDSGSYDIIILDQYRNHILDRHIMKVYERREHSCRIILLASGIPSFFNSELYR WTLLIPTTMLRFQFADIQKLAAVNQICIDEREVREILRVTCGWTIGVHALLEEYGAVRTL NPDLQLYPLFDVYIYRQLNQAQRQSLAVLSVLEHFNIQLIEALCVDTGIMKILTWMMNFH WFVQVDRITRLFTYSPVFREFLYDKFLMYEKNPSHLYRKIADYYESSGDILNCLRQLYLL KDYKKILQLLELYESKNFADYDTELMRNIYQMVPMELYVDYPYAWLHAIMDNFNNLQDIF YGKQLLEGFLHALHSGSLHEDEKLLQGEVELILAYSRYNNLHEMSRYFKRSKTLLRNQTS RISNPEIISTFGSPHNLFLYHRKPGDIQRIVNILHKDLHYYFEITNNSNGGLMEQASAEQ QLESARFAESIHTAWEAYYIAEHYRQKWICVSSLFTIGRAAYHLRDHTLLQFVHQQLAVL REKVILPPLLSEIDLAQAYLYILSGEYEKVAEWIQEGRKGNLLQGATLYSSIVYGMYLIK IRNYAKLRVVASLLESQAHERKQMFGTIYALLFYCILLEEENHQEQIVEAVHHIIEICQP DGIMTVILKIGKDVFLSCSDSWRWRKLKQLLEEHRDYNSYGLTERELELVNYVLKGYSRR EMAEASGLKENTVASYMKRLYRKIKVHSRKELKELFMK >gi|312955264|gb|AENW01000043.1| GENE 18 20726 - 21265 712 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914617|ref|ZP_02076831.1| ## NR: gi|160914617|ref|ZP_02076831.1| hypothetical protein EUBDOL_00624 [Eubacterium dolichum DSM 3991] # 10 174 1 165 172 126 41.0 6e-28 MATIAGGVSMKRRDLIRQKNKLAKTGGFRYIRYAKYACVAMVVLFLVYVGGLSNLSGKSY EDLISKSPIVITGFMICTANLYVWYVLKHFLKDLAVPQHVESIRVNLLLMTIGQFILMNF ISAVLMMLSLRKYFQWNTFSVKNALKEIRKEGQLSVLIVTALVLILFISLVFGIYFSIR >gi|312955264|gb|AENW01000043.1| GENE 19 21288 - 22901 1788 537 aa, chain - ## HITS:1 COG:BBB29_1 KEGG:ns NR:ns ## COG: BBB29_1 COG1263 # Protein_GI_number: 11497021 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Borrelia burgdorferi # 8 445 14 469 469 275 37.0 2e-73 MKNIQAKLQTFAGAMMVPIILLVLVGFFVGIGSAFTNYILPEGNILYNLFTMITNLGFMF MNNLQLWFAVAIAFTLAKKEKGWAAFAGLILFFCFMRGIEGWAALEGWTAETTTVDALVK SGYTQQAALNFNALWSSSLGIYSYNMGIFSGIVTGLIAAGLHNKFVDTKLPAMFGFFAGT KFVIIMVALASIPLAIAFYYVWPYVAGALQSITGFIRTSGLLGTFVFGTLDKMLLPFGIH HLIAFPIEYTKVGGTMMIDGVMYEGVKNIINGQAASASATGYITRNFTNGRLLFQLAGLP GAAFAMYRCAKPENKKKVASLLVPSVFTLAMVGISEPIEYTFLFVAPALYWLVYAPLCGL CYVAAEITNISINGTALFFMIPNLFQPQKVHAMSALWLLPVTFIVYYFAFKFAITKFNLK TPGRDDEGEIKLMSKKEYNEIKNSGKDEANVSSAPEDALEVRIIEALGGADNIETVTCCA SRLRVTVKDDSLIAPDTSWKNYLEAIGVVRGKNSVQVIYGVRVVNITTKVKDYLHLD >gi|312955264|gb|AENW01000043.1| GENE 20 23005 - 24366 1379 453 aa, chain - ## HITS:1 COG:BS_ytjP KEGG:ns NR:ns ## COG: BS_ytjP COG0624 # Protein_GI_number: 16080050 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus subtilis # 9 449 9 462 463 243 31.0 7e-64 MKTIYDTGKRTSELLQDLKQLVEIPSVRDERTAGSSAPFGKEIRNAMDVFLQIAQREGFS VHDFDGYAVDAQLGEGDDYIGVLAHLDVVEAGERSHWHGDPFQMQEIDGMLYGRGVNDDK GPLLAALYAMARIRQEGRTLYHPIRLIAGGAEETTWECMEHYFKHNPQPIFGFSPDGNFP IVNGEKGILQVRFLLNADSDISLHCKERLHIVCDDLQVIVPKGSDVSFVERTNLIEVMQD GIKITYRGVRALSRNPQRGDNAIFKFVKDFHGHLDQAGSLYPMVNMIYENFLDDFYGKKS GLYHEDAAMGCGSVCLMSLNTQDGQLELCVDVRYVRSTDEQSLLHTLRKTAQHYGCELEV LRHKRLLYVAEDSTLIQSLKTAYHRVMKEDAAVFTKGGASYARVLEHGVAFGATFPDEDP RPHMPNECMPVKSLLKASDIYYEALVELACTKR >gi|312955264|gb|AENW01000043.1| GENE 21 24479 - 26014 1739 511 aa, chain + ## HITS:1 COG:BH3853 KEGG:ns NR:ns ## COG: BH3853 COG3711 # Protein_GI_number: 15616415 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 1 494 3 497 700 154 24.0 5e-37 MNKRIMKIVDVLLKQDSYITIDKISEELAVSNKTIRNDLQIVDQYLEENNLKLIKKTGVG IRIDGKVRDKLHVLESVREKNKTLADYSPQARKIFIGMQLSAFDSCRIYELSEQLFVSRA TIHKDILSLTKDLETFKIALHRKNNNGISMEGKEKNIRNFLLELMLRDNGYQMFIDIIRR DDYRCDGSYVFPGLEVTDDEVKDFTGCILRWGNPYINSLTFPSMVLVLLRAFVTYLRIQD RHIVHLSTSFIEDLRKEPFYKEARELCDRLANHYRLQIPDVEIRYLQVYFLALQNSRDLS EQEQQEARMLSDALLTSWSEQLHLPFDRDEALCQSVYDHLCPAIIRFRHGIPNENPLMQE IHTLYERTFQVARNSVSVIEEHFHCNVSDDEVGFLALHLAASLENMKQPLKTILVAHGGV GAGNLLRRKLSAQIPEIDIISQETFFSIYECDISDIDLIISTLELNLHTDVTILQVNSLL HDYDILRLKDVIREYYKVKNDPYNFKSAAQE >gi|312955264|gb|AENW01000043.1| GENE 22 26271 - 26759 689 162 aa, chain - ## HITS:1 COG:CAC1354 KEGG:ns NR:ns ## COG: CAC1354 COG2190 # Protein_GI_number: 15894633 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Clostridium acetobutylicum # 1 161 1 158 159 125 40.0 5e-29 MFGFRKKEKSREELLAVVDGTLIPIEDVKDPVFSQKMMGDGFAIASTGDTVYACADADIT MLFPSNHAVGLTLKNGMEILIHVGIDTVNENGNGFTCLCEQGKHVKKGEPLLKMDREYLL SKGYDLSVIVIFTNKDSYAEFRREEPVEVKGGESVAVTYTLP >gi|312955264|gb|AENW01000043.1| GENE 23 26988 - 27704 828 238 aa, chain + ## HITS:1 COG:sll0807 KEGG:ns NR:ns ## COG: sll0807 COG0036 # Protein_GI_number: 16330729 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Synechocystis # 2 225 3 221 230 92 28.0 6e-19 MKHIKIAAGLAHVNYGRIADLVKEVSDAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRP ETDKPIECHIYTVSMDRMFIEQIDEAGADMLIIPAEHFIGAQLAYIINWCRERHIKVGLT LGCYTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVQRARKMIDEKNPKC ELAVDGGLRADNMDKLIECNPDVIVLSSAIFKDPDGAAAGVKKCRAAIDAAAEKYGLE >gi|312955264|gb|AENW01000043.1| GENE 24 27673 - 28359 687 228 aa, chain + ## HITS:1 COG:BH1678 KEGG:ns NR:ns ## COG: BH1678 COG1284 # Protein_GI_number: 15614241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 31 228 8 199 290 73 28.0 4e-13 MQQQKNTVLNNTKNSPAESSFKESSILTLVKDYGWITFAAAITAVAVNFFFTSTGLAPGG ITGLSLVCSTVFGIPVSTMSLCISIPLLILSTIVLGKSFGIKTLYITLATPLFMKLIPSI HTTQFLLDIHPLLELAVAGLLGGLLVGAAIGIALNHACATGGTDVIALLIQYVFKFLKVS VILFFLDGSVVIASGVITQNALISVFSFLSLMVIIQTISFVTKHKLSA >gi|312955264|gb|AENW01000043.1| GENE 25 28430 - 28924 182 164 aa, chain - ## HITS:1 COG:alr7153 KEGG:ns NR:ns ## COG: alr7153 COG0675 # Protein_GI_number: 17233169 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 144 241 384 408 130 45.0 9e-31 MKRISEKRNRRVKDILHKASRKIIDLCVKEGIEVIVVGNHAGWKKRIHMGKKNNQTFVQI PFHTLIEMIKYKGEAAGIRVVVCEEAIQSKASSIDEDQIPVYGNDVTHTFTGKRIKRGLY RSKNGILMNADINGASNIIRKVYPCMPERERWSRGTVNVPVTCI >gi|312955264|gb|AENW01000043.1| GENE 26 29308 - 30162 1015 284 aa, chain + ## HITS:1 COG:BS_sigW KEGG:ns NR:ns ## COG: BS_sigW COG1595 # Protein_GI_number: 16077241 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 6 183 5 180 187 73 28.0 5e-13 MQQEELNKRIDQAVQGDRLALEEVLTEIQDMVFNLSLRMLGTIADAQDAAQEILIKVMTS ISTFRKESRFQTWVYRIAVNYLMDVKRSMFAAHPLDFDFYANDLRASYVPDEEEALTGCT REEAARELKLSCTNVMLQCLKPQDRCIYILGTMFHIDSKSAAEILDMTPEAYRQRLSRAR KRMASFLSTYCGAVSNGFCQCDKRIPYAVMTHRLEPQNLEYSRLKTLDKRILNEFCDHME ELEEIMDSFDQLPAFRCTMDAKQLLRELVDSEVMKKVQNAKEVA >gi|312955264|gb|AENW01000043.1| GENE 27 30164 - 30841 636 225 aa, chain + ## HITS:1 COG:XF2023 KEGG:ns NR:ns ## COG: XF2023 COG5587 # Protein_GI_number: 15838617 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 6 222 20 237 237 77 29.0 2e-14 MSIMMEYLRQLQKNNQRDWFQSHKELRKEAEAEFEELLQELMERIACFDSSINGFAPKEL TFKQVRDTRFSKDKTPYLPAFRAHISAKGKLPIPVGYYIHLMPDNQSFLGGGLFADMFKD ATAMMRDAIAAKPEEFSAIIEAPSFKDHFTITGTKLKRVPKGYDPDHSMASYLCHKSWCL EYPLMDNEVEDREKFLTLACTLFHAMKPFHDFMNTALQDFQFPQR >gi|312955264|gb|AENW01000043.1| GENE 28 31077 - 31778 658 233 aa, chain - ## HITS:1 COG:alsE KEGG:ns NR:ns ## COG: alsE COG0036 # Protein_GI_number: 16131911 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli K12 # 6 218 4 216 231 263 58.0 2e-70 MKPMFSPSLMCMDLLKIREQIQVLNLHADFYHIDIMDGHFVKNITLSPDFVKAVARVSRV PLDCHLMVTHPDDYITMLAQAGATFLSPHAETINTDAFRILHKIHELGCRTGIVLNPATP LSYIRHYLHLLDKITIMSVDPGFAGQAFIREMLDKIKEAKALKLQHGYRYLIEVDGSCNA ATFQELRQAGVEVFIVGNSGLFQLDDNLHAAWEKMLAQFHGEIDKTQHLRKQL >gi|312955264|gb|AENW01000043.1| GENE 29 31842 - 32834 894 330 aa, chain - ## HITS:1 COG:BH3727 KEGG:ns NR:ns ## COG: BH3727 COG1609 # Protein_GI_number: 15616289 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 8 330 4 322 331 176 34.0 8e-44 MEQHKYNIIDIARLAQVSTATVSRVLHEKGGYSKETETRVRRVIAECGFQLNKNAQGLRT QKSRNIGVIVPDITNEFFARIIRYLELFFLKHQYSVLICDSHEDIEIEQLHIRNLKEQQV EGIIYISGRNANPIQESAFSIPIVYIDRKPEDVHIFVHSDNRQGGYLAARELIEKQCRSI LFLRDQKKASTIRQRRSGYLEALEEAGIAFQESWEIMTKSDYASVFKTVTNLLMQKGCFF DGVFATNDNMALACLHALHAQHIQVPDQVKIVGFDNVSISQFCHPALTTITQNTELMAEA AGDALLKRIHHELDKQEFIIPVSLCVREST >gi|312955264|gb|AENW01000043.1| GENE 30 33415 - 34422 584 335 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399870|ref|ZP_06644016.1| ## NR: gi|293399870|ref|ZP_06644016.1| hypothetical protein HMPREF0863_00153 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 334 1 345 345 129 30.0 3e-28 MIRYELLRMLRNRKWKYLIPAALLAYIYISGVSSFTVTEGSIYQDQQIQAAACLVSFLFL SIVYQIAWEEEPPLSWQVLLAFPLTCRKSYLCKLCILLLFQLPAAAIGIGVYAVIQKTIA SPFLTFLLCIQLLYLTGFLYGCYKTSQGYLAAMGTITIINVTKRLVPVFIIFCMLNGKAW SAAFAILWPLILLFCLSVIIGLWILLPVCMRRKLHQEMVLSNLFPNLKFTPGQLMLMQYR KGADRLLQFIFRKCDTHSRSYWKRCAVIEVSIKLHAFSFALLLFFLAWFMISLNLLILMA AVICLLHVIYCLCLESRTMHAVCIKDTGHMQRKRS >gi|312955264|gb|AENW01000043.1| GENE 31 34419 - 35087 572 222 aa, chain - ## HITS:1 COG:CAC0866 KEGG:ns NR:ns ## COG: CAC0866 COG1131 # Protein_GI_number: 15894153 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 4 197 5 210 313 96 29.0 4e-20 MKQITLNKVGYAYDTEWILEDLNLTIQQGDGCILLTGKNGAGKSTLLNVVCGFLPPDYGN LSRGGMTIGYLPYEHPLYRHLTVLENLRYFYRCFHGKNLDVQDAAVQEVLQALSIDYLNQ RMDQCSSGQEQKAGIACILLSNADMIIMDEPFVAIDAKSSEGLCELISKKCENTVFLITS HTSSGILPVVNRLLALDGHHLVLDTKDHRKIMQYFQPEEDAV >gi|312955264|gb|AENW01000043.1| GENE 32 35065 - 35697 682 210 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0081 NR:ns ## KEGG: EUBREC_0081 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 93 1 95 294 68 40.0 2e-10 MRIQEIADTTGLSKKAINLYEKKGLLQVIRDENGYRCYTQEHVRILMRIKILRRMDVSLA DIEQLLQEKNMQLLDMQKEQLEKKLAQCELQNLYMQRIAALLEEEHTELLQSADREMEEA WEEVQEPQPDKRNVSSFIVVEVMLATLLLDNGNMLYAVIGAMLLVHVFYVIGKASSCLES PLDYLLYMGIRRVRTLYTKRRVCNETDHTE >gi|312955264|gb|AENW01000043.1| GENE 33 35903 - 36415 754 170 aa, chain - ## HITS:1 COG:CAC0845 KEGG:ns NR:ns ## COG: CAC0845 COG1528 # Protein_GI_number: 15894132 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Clostridium acetobutylicum # 12 170 12 170 170 188 59.0 4e-48 MLDKKVSELLNDQINKELYSAYLYLDFSLYYQEQGLDGFANWYMIQTQEERDHAMLLLQY LQNNGEHITLKQVDKPDKVCSALKDPLEFALEHERYVTSLIHTIYDAAHEVKDYRTMQFL DWFVKEQGEEEKNAEDMVKKFELFGTDPKSLYMLDNEMAGRAYSAPSLVL >gi|312955264|gb|AENW01000043.1| GENE 34 36514 - 37947 1646 477 aa, chain - ## HITS:1 COG:BS_deaD KEGG:ns NR:ns ## COG: BS_deaD COG0513 # Protein_GI_number: 16080962 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus subtilis # 3 477 4 479 479 458 48.0 1e-128 MKFEDYKLDASICEALHTLGYQSPLPVQEAVIPLMLEKKDILVKSRTGSGKTASFAIPII QDLIWEERSPQALVLSPTRELALQIKGEFDNIGAYKRIKTAAVFGKQPFRFQAQDVKQRT HVVAGTPGRVLDHLEQGTLRTEKIRYIIIDEADEMLNMGFIETVQKIFFRLPKNASVCMF SATLPQEIQELAHDFLKQAEVVEIESQTSVSEQMHHYAYRLKEHEKPQALLKLLCRELPE SCIIFAKTQEHVREICRMLYDKGISVDQLHGGMLQEDRLENMKDFRLGKLRILTATDVAA RGIDIQDVTHIINYDMPNKKETYIHRIGRSARLDRSGTAISFVSQYDDFRLQELEEYLGN ALEFHDSSELEAVIADAETLRKLGIPKSQKEEKGKELRKDMMKLYLGGGKTKKIRPGDIV GAICEIEGVCGDDIGVIQVQDHQSYVDILHGKGLQVLRALRQKTIKGKKLKVERAKE >gi|312955264|gb|AENW01000043.1| GENE 35 38719 - 40113 1429 464 aa, chain - ## HITS:1 COG:PH0575 KEGG:ns NR:ns ## COG: PH0575 COG0534 # Protein_GI_number: 14590472 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Pyrococcus horikoshii # 1 447 21 471 472 187 30.0 3e-47 MQEKGILQGNLTKALLRMAVPLFVLNLVNSLYNIIDTFWVGQLGELQVGAVSLVGPIMWC AQSVAMGLSAAAIALLSTRLGANQKGDACRFATALLYFAIGFAIVLSIGTLLLLHPILSW LDTPKEIYDASYQYLLGISFDYIGLLMLNLYMAMRQSAGDSRSGVKLNMCASLLNAIMDP IFIFVFHFGILGAAIATVVSKLVMVPIAWRRLHDKAFPVHIDFRAYPFHAADGKIILKLC IPAASGQFLENLGFVIMNKYIVYYGAVAISAYGVGAKMVTLAYIPVMSIGAVLATFVGQN LGAGNTERARKAFHTAMKLSTLFSSTLTIIGMLVITPFIHLFVPNASTQLMELTQEYAFF ALLCGVFMGWYINLNDGVFNGSGHTNYTFILSMMRLWAFRIPMILLFHRFTSLGITGIWL AMLLSNIFECILAQAIYLRHRWEHSAILTETEKIQPSEETVKEI >gi|312955264|gb|AENW01000043.1| GENE 36 40279 - 41268 887 329 aa, chain + ## HITS:1 COG:PH0078 KEGG:ns NR:ns ## COG: PH0078 COG3191 # Protein_GI_number: 14590032 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Pyrococcus horikoshii # 2 319 14 344 361 299 51.0 6e-81 MKKGYRNKITDVKGVRVGHKTIAADNVQTGVTVILPTEGDIFREKLTASCHVINGFGKTG GLIQLEELGVLESPIALTNTLCVGTVQQALVRYMLQDHPEIGTTSGTVNVVVGECNDGYL NDIRACSIQESNVYEAIADAGKDFALGAVGAGRGMSCFEMKGGIGSASRVLELNGEEYTV GLLVLSNFGLKNDYIKENVSFHDSVKEQVEQGSIIIILATDIPMSDRQLKRVCKRMPVAL ARLGSHLGNGSGDIAIAFSTANKIPHSADCSFISQTILHEQQIDKVFRAGIEACEEAIQS SLDAAETVVGREGHCRYSLKDTVAEMKKG >gi|312955264|gb|AENW01000043.1| GENE 37 41334 - 43214 1158 626 aa, chain - ## HITS:1 COG:BH3996 KEGG:ns NR:ns ## COG: BH3996 COG3410 # Protein_GI_number: 15616558 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 451 617 16 177 188 79 30.0 2e-14 MLIYEGTKYDFKMDMDLDKIPHLLEEKLYERMHIHTSKKEVTSWKNSLQYMYKVLNDPTI PDTCGVAIEYNIPKTNKRVDFIMSGYNHDGKASAIIIELKQWERVETVFNREDLINTEVM TALGKGVHRVVHPCYQAWSYVQHMNDYIEEVGKKDIQLYPCAYLHNYDLKKEQNIINPIY NTCIEKSPLFTQGEIPRLREFIKKHLKQGDRKEVLFLIENGRIRPSKSLQDCISSMLDGN QVFTMLDTQKVVYEEILYMAKLCQKDKRKRVMIAKGGSGTGKSVIAVNAMVNLLKEDMFG QYITKNAAPRNVYIDRLAGKMKKNKIKSLFAAPDKFYQQQPNDYDFLIVDEAHRLREKSG MFQKGENQIQELISSSLFTVFFIDPYQRVHFRDFGSISEFQKQAQLQNAEVIQYELHSQF RCNGSDGYLAWIRNMLQLEETANFNFKDISFDFRVIDDPNELRAMICEKNDESGKARILA GYCWEWEKAGRSDPNHDDIVIGDFKMSWNLDAGDPYAISQGSVHQVGCIHTTQGLEFDYV GVIIGEDLRYENNELVTDYRQRAKTDSSVKGLKKLYRENPEKAKHIERQIILNTYYTLMT RGMKGCYIYCCDSELQKYIKMSIADA >gi|312955264|gb|AENW01000043.1| GENE 38 43351 - 45717 978 788 aa, chain + ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 4 782 3 792 800 388 33.0 1e-107 MNILAHINSNQEMQSLQEHSEHTFTAIKEYAAARGLTNCMKLTAFLHDCGKASREFQKYI TKAAMEYIFLPKVNHSSAGAQILLEVCRSYSDMSECLVKLMLANAIVSHHGLCDFINVHG DNALRSRCYPKKALDMEHITAFMNDFISTEELENLFRAAHKELSVYLANFMKQKTAQDAK DYYFYIGALQRLLMSLLIHGDREDTRNFMEHTQTIVYTEDTIWQAATDKLESHLAEITAN SSFNPINELRASISDQCKAFSSHSPGIYRLSCPTGSGKTLASLRYALHHAKKYHKKHIIY VAPFKTILEQNAEVMKQFFNEDLVLEHHSNIIPSQYTDYDYYSSSWNKPVILTTAVRLFD VMFKDRTTDVRRFHQLADSVLIIDEAQKIPVQTISMFNEMMNFLAYNCNTTVVLCTATQP LLETTTYPIKLASESEIVKQTKEMQEQFKRVHIEDACRRGGYSIADLSDFIFQKLQPGCS MLVIVNTKAEALNLYRACEQHHEIDGLHLYHLSTSMCPEHRHLTLEDLKEHMEQKDTVLC IATNLIEAGVDIDCDVVIRSLCGLDSILQAAGRCNRNGKNSELGTVYLINSNEEHIEKLK DVRKGQNETDILLSQLHASKEGNRVDELLTLPFIRQYYDSYLFDRRQDTEYSTKIENRKV SLFDLFSRIGSKKESDDLAHPCLGHALKSAGEKFEMIDSQSIGVLVPYKDGEKLINQLNS SISNAEKYGLLDKTQRFMVNVYEHKYKELEKEDMIYQLEFNGMLVLRDGFYKKDTGLEVR KELEDMFV >gi|312955264|gb|AENW01000043.1| GENE 39 46232 - 46972 383 246 aa, chain + ## HITS:1 COG:no KEGG:Dtox_3650 NR:ns ## KEGG: Dtox_3650 # Name: not_defined # Def: CRISPR-associated protein Cas5 family # Organism: D.acetoxidans # Pathway: not_defined # 1 233 3 230 233 300 60.0 2e-80 MEKKNEITFCVKSKYALYSDPLNRVSGEKFSYQIPTYEALKGVVKSIYFKPTISWFIDEV RIMNEIQFTTQGIRPINYHGGNTLSYYTYLTDVEYQVKAHFEWNLHHEELEQDRNENKHW LIAKRMVNRGGRRDIFLGTRECQAYVEPCEFGEGKGFYDDHTIVPFSTMVHGFIYPDEWV CEEEKGKLIATFWTPVMKKGIITFIRPEQCAIRRIVGTGDIKRFEKDINFKSVEHEEGGE LYELGE >gi|312955264|gb|AENW01000043.1| GENE 40 46956 - 48836 543 626 aa, chain + ## HITS:1 COG:no KEGG:Dtox_3649 NR:ns ## KEGG: Dtox_3649 # Name: not_defined # Def: CRISPR-associated protein, Csd1 family # Organism: D.acetoxidans # Pathway: not_defined # 1 626 1 627 642 443 38.0 1e-122 MSWASKLLETYDICQSEVGKESETGMLLPLSHLTTKAQIEVVLDENGKFIHAIEIPNDDA VTVIPVTEDSASRSSGITPHPLHDKLIYISKDYAEYTGKRNDPHVLAHQSLLKQWIDSSY THSSIIPIYQYLEQGTLISDLISCDILKLNGEQLDKKYKIQKTVVQTEAFVRFKIRGIQK RIVEPWCDKMLFDAYHNFYTSQHTDEDLCYITGKMMYCTEKHPAKLRQGKDKAKLISTND ANGFTYRGRFVSKKEAISVGYETSQKIHNALRWLIQKQAYKQNGQTILVWNAHCDNIMTA FALDESLFPALPDKVDTEEDYAQRVNKAIDGYRQNISDHNDNIVIMAMDAATIGRFSITY YQEIDASTYYKHLQNWFTYCSWPQYSKADHMSDVMTPIPREIISCAYGTLRGAFFEVDDQ LMTLQMGRLLPCISEGKPIPDDFIIRLNNQIKTMSTNTKYNWNKCIGILCAVFKKYCYDR EGVNWSVNIMENKKLAKSNIPYLLGRILAIYDAIEQYALNIQKEDRPTNAMRLYAPFQEH PFVTLTTLDKKIRPYVEKLGRKCDYLLSMKQDLMEELYTEMDIEAVEHIQNLNAYFVIGF DCQRNEIKRINTERKEKNKQKEESKL >gi|312955264|gb|AENW01000043.1| GENE 41 48833 - 49678 372 281 aa, chain + ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 280 1 282 283 355 64.0 6e-98 MTAFTNKVDFAVIFTVNKANPNGDPLSGNQPRIDFKGFGEVSDVCIKRKIRNRLQDMGEN IFVQSDERSNDGFKSLSERASNNKELKAVLKDREAYASAACKQWTDVRAFGQVFAFKANN VSVGVRGPVSIRTAESINPVVTTDMQITKSVNSEPSEKRSSDTMGMKHRVDFGLYVCKGS INHQLAEKTGFSEEDAEKIKEALCSLFMNDASSARPEGSMEVCKVYWWKHNCLAGQYSSA KVHNSLKVEVKNDVDTPNCFEDFTITLSPLEDLEPEIYDGI >gi|312955264|gb|AENW01000043.1| GENE 42 49695 - 50333 110 212 aa, chain + ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 207 10 217 224 192 45.0 4e-49 MLSGIQHFAFCRRQWALIHIEQQWAENYRTIDGQIFHENAHNGAFSETRNGILIRRGLSV FSRTMGISGNCDIVEFHPSEEGISISKDSKRYLPVPIEYKRGEPKQYQADDLQLCAQAMC LEEMLLCKIEKGYLFYGETRRRTEVLFSSDMRSTVKAFCEEMHKLYLKQYTPKVKISKKC NACSLKDICLPKLNQNPSVDKYFDKYLGDKGI >gi|312955264|gb|AENW01000043.1| GENE 43 50330 - 51361 261 343 aa, chain + ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 343 1 343 343 445 62.0 1e-125 MKKLLNTLYITTPRTYLSLDGENIIAAKEDKSVSRFPLHNIEGIVGFGFTGVSPALMGKC ADMGISLTFMTMHGRFLARVVGEERGNVLLRKEQFRISESSDKRLAYAKNMITAKLINSR NILLRAKRDYGMRIDVEKIETAAEAIRLSANEARKADSADSLRGIEGNAANCYFHVFDDL VLQQKNDFYFHGRNKRPPLDNVNALLSFTYTLLAKDVTSALESVGLDPYVGFLHTDLPGR TSLALDLMEELRSILADRFVLSLINMNIVTADGFTKTDSGAVYMDDTTRKAVLSSWQKKK QETIKHPFLDQKIEWGLVPYVQALLLARTIRGDLPEYPPFLWK >gi|312955264|gb|AENW01000043.1| GENE 44 51368 - 51661 129 97 aa, chain + ## HITS:1 COG:BH0342 KEGG:ns NR:ns ## COG: BH0342 COG1343 # Protein_GI_number: 15612905 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 96 1 96 96 127 63.0 4e-30 MLVIITYDVNTQNSAGKKRLRNVAKVCVNYGQRVQNSVFECVMDQAKCREVKHKLTGLID KEHDSLRFYYLGNNYKNKVEHIGVKPSFNVEEDVLFI >gi|312955264|gb|AENW01000043.1| GENE 45 52773 - 53453 140 226 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1094 NR:ns ## KEGG: GALLO_1094 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 4 215 16 231 239 92 33.0 1e-17 MHNMLLFIIFHVVGDFYLQSDEVAKNKENLNTFMLIHSIIYSIPFVLLFIYFKINVSLLI IITLSHLLIDVCSVKLKNKYKEKECLIFCSDQFIHIFIIYLCSSYMNLTIILSNMALISI LAILILVKPTGVLISLAFKVIFKEEKSNHELKIGTYIAYLERIIIFLLCIFDSISTIGFI IAAKTLVRYKDINNNKNHFQEKYLIGTLLSTIGALCCFALIKFLST >gi|312955264|gb|AENW01000043.1| GENE 46 53446 - 53616 194 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVENTWKKGMSTKISDILGTTRQNIDKHIRLGNINENRKIDFSVACWLIEELDNA >gi|312955264|gb|AENW01000043.1| GENE 47 54406 - 55914 2034 502 aa, chain - ## HITS:1 COG:L0347 KEGG:ns NR:ns ## COG: L0347 COG1190 # Protein_GI_number: 15672355 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Lactococcus lactis # 9 499 4 494 494 640 64.0 0 MEIEKEQIMEKLTEQEVIRRQKMEDLRAMGIEPFGHAYQRTHKSGEIRAAYEDCTKEELE EKDLTVKIAGRIMTKRRQGKAGFMHIQDIDGQIQIYVRKDVIGEEAYEVFKKSDLGDIVG IEGKVMKTNHGELSVKAEVYTHLTKALRPLPEKYHGLQDVEERFRRRYVDLITNENSKRI ALTRPRIIRAIQNYLDGEGLVEVETPVLQPILGGASARPFVTHHNTLDMPFYLRIATELP LKRLIVGGLEGVYEIGRLFRNEGMDATHNPEFTTVEAYVAYSDLSGMMDLVEGLLNHVAE TVCGTTEIEWQDKTISLKAPFKRLHMVDGIKEACGVDFWQEMSFADACAIAKEHDIEVEK KHNSVGHIINLFFEKYVEETLIQPTYVYGHPVEISPLAKKNAQDPRFADRYELFIDGHEY ANAFSELNDPIDQRERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRLV MLLTNSQTIREVLLFPHMRLNK >gi|312955264|gb|AENW01000043.1| GENE 48 56378 - 58072 1904 564 aa, chain - ## HITS:1 COG:TP1026 KEGG:ns NR:ns ## COG: TP1026 COG1164 # Protein_GI_number: 15640010 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Treponema pallidum # 2 562 3 587 589 457 41.0 1e-128 MKFKDYNYERYSYEAYAEAMQQAGTRLKEAKDYQSFKKAFDEGKRAFEHLDTMYNICYVR YTINTNDAFYQKENDYWDEAMPKMKSLTTAFDKEVLASPFAEELKKDVPETYFLLAEFAQ KSFCDEIIEELQEENRLQSSYQKLIASAQIPFDGDIYTLSELGVKMECDDRDIRKRATQA YWGWMQSHQDEIDDLYDRMVKVRDRMAKKLGYKNYVELAYMLQCRFDYKQEDVANYRRQV LEDVVPLCNALYERQRERLGYDRLHVYDEKYEFASGNPTPKYDTQEMIARANTMYHELDE RCGTFFDFMVEHDLLDLDSKKGKAGGGYCTVFAEDRSPFIFSNFNKTSHDAEVLTHEAGH AFQVFTSMGIRPVECIWPTYESCEIHSMSMEFFTWPWMETFFEEDADKYRFLHLGGAAKF IPYGVLVDHFQHEVYEHPEMTPAERRQTWRRLEKQYLPHKDYTDCEFLENGGWWFRQSHI FMTPFYYIDYTLAQVCALQFWYRLYQKDENAFEDYYRICQIGGTKTFTQIVAAANLKVPF ADGCLKDVMKAVRSYLDQVDDKAL >gi|312955264|gb|AENW01000043.1| GENE 49 58423 - 59445 543 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 9 324 29 343 353 213 37 5e-54 MHMPNNSWKIRDIVIPNQVVIAPMAGISNPAFRVICKEFGAGLIYTEMVSDKALYYDNEK TVGMTDVEEQEHPLAMQIFGHDIEIMVYAAKFLDEKTDCDIIDINMGCPVTKIVKSFAGS ALMKDVDHAVEMSRAVVQSVKKPVTVKMRIGWDMDQITCLELARGLESVGVQALAVHGRT RKQMYEGCADWSYIKKVKEAVSIPVMGNGDVRSGEDAERMLKETGCDAVMIGRGVLGDPW LIKDIAHYLECGKHMPEVTLEETFAMARLHAKRLCNLKGEFVGIREMRGHAAWYVKGLPK SHQLKDQLSKIETYEEMQSILSAYEAEYARIQEQYKQGNR >gi|312955264|gb|AENW01000043.1| GENE 50 59429 - 60319 1267 296 aa, chain - ## HITS:1 COG:BS_yacC KEGG:ns NR:ns ## COG: BS_yacC COG1281 # Protein_GI_number: 16077139 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Bacillus subtilis # 4 284 2 282 291 258 46.0 9e-69 MMKDYLVKALACNEHVRIYICSSTHMVEEARKRFDLWPTSAATLGRVLTVGSMMGSMLKT AQEQITIRINGGGPIGTILVDAYSDGHVRGFVSDPHIMLQYNDTGKLAVGAAVGKDGYLE VVKDMNMKENWSGTVALQSGEIGDDFAYYFTASEQTPSAVSVGVLVDTDNSILSAGGMII QMLPDAEEEDIVKVEQIVANLRHMSTMIQEYESLEDILRDLFDDVRILTGQDIEFRCKCD RATMKRVLTTLPKEERQQMIEEDHGCEITCNFCGEKYQFSEEELLELERFMDAHAK >gi|312955264|gb|AENW01000043.1| GENE 51 60507 - 60962 587 151 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2242 NR:ns ## KEGG: Sterm_2242 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 14 125 16 127 153 74 35.0 1e-12 MTFEEGVALLFHKLGDSKIMALGSSVNDYVMVRNVSCLFYDGKIYFKTDKNFRKTQQLYR NPQVALCTGGVQVEGIAVNKGLVVDEPGRRFEALYKKYLWQSYNAYSHEDTEILIEVTPR FVEIWDEDENRNAFQIFLDFDKKTVEIKPYD >gi|312955264|gb|AENW01000043.1| GENE 52 60976 - 61584 746 202 aa, chain - ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 4 197 3 194 209 124 36.0 2e-28 MKNNMSAKRLALIGMLGALGAILMMFRFPIPFMPPFLSFDLAAIPELIGAFALGPVAGVL IVFIRVMVQMVISGSNSMFTGELQSFLLGVALVLPASLLYRHKKTRKEALLGMTAGTLVS TFVAVLTNLYLIIPFYVALYDMNMDQIILSCSKVNPMMNSVTTMVILGIVPFNLIKYGIS CLITFAVYKKISPMIHRFANRQ >gi|312955264|gb|AENW01000043.1| GENE 53 62123 - 63022 1023 299 aa, chain + ## HITS:1 COG:no KEGG:LA_1827 NR:ns ## KEGG: LA_1827 # Name: not_defined # Def: hypothetical protein # Organism: L.interrogans # Pathway: not_defined # 11 247 9 246 289 66 24.0 1e-09 MSNAMNQLNYSNDLFFKYTLSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIIGK KRIILDVHVKDEQNRHFNIEMQTTYKGLAEMMRFEFYGARALNDQLNSGKKYKDLKPVYQ IIFIDEYAWNNRNLINQYQMRNEQGEKESYYPLILRTYIHMPAINDIVREKEIQRLNDFE QLVYLFENNGKNDILKSKERLVKVFMDKYEEMQKDDELWSTAMAIQMGEARYRYGLEDSF EEGKKEGEALLLIKQLKSKYHEDCSAWLLSLNDEQFEAVSNLILVCNTYQELKNQVMSM >gi|312955264|gb|AENW01000043.1| GENE 54 63228 - 64316 1017 362 aa, chain - ## HITS:1 COG:STM3686 KEGG:ns NR:ns ## COG: STM3686 COG0246 # Protein_GI_number: 16766971 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Salmonella typhimurium LT2 # 3 314 2 334 382 139 29.0 1e-32 MKEAVLIGAGQTGRGFIAPILQTNAYHITFIDKNKELIDRLNAEKSYTVHYFGDGKEPVT VTGYDAYTTADEEVIEKLAHSDLITTSVFAGNIKKLVGLLSAAAELCGEKQLRIVCCENG VHVKQPLVDANISDSISEGVIFCTTLQPKEKSLALISEDVAELPVDGSVKGMIPDIVGMP LEADFPSLIQRKIYTYNFMSAIVAYLGDYLQYEVYGEAANDPQIMELMDRAVPVVSTIIA REYAVEQDVQLAFTMRAVHKFRNREIYDTVYRNARQAQRKLNKEERLYEPLRLAEKYGQK CGYILLAAAAAMRYAVVKENSNPDTLMKMYENFHSADKLKEVYGLLKESISLKDVIKFCA EF >gi|312955264|gb|AENW01000043.1| GENE 55 64513 - 65331 1000 272 aa, chain - ## HITS:1 COG:ECs5003 KEGG:ns NR:ns ## COG: ECs5003 COG1028 # Protein_GI_number: 15834257 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 4 272 2 268 268 249 48.0 6e-66 MEQKQWIDLNNKVVIVTGGAMGIGEAMVKDLLACNARVAIFDLAKPKDFSEDDRRMYVHL DIRNKKEVEAAVDAVVQKFGTVDALVNDAGVTRPRILVDYYGSEPQYELSEEDFDFMVGV NQKGTFLVSQAVTRVLYGKKEGVIINLSSCAGLMGSRGHSCYSATKAAIHAFTISWAKEL GPYNIRVVGVAPDILDRTPANNDEKYRAQAYGRGWDVNTRPEEFFKNYKSSIPLGRPGHL YEVADLICYLISDHASYITGVTIPVSGGKSKG >gi|312955264|gb|AENW01000043.1| GENE 56 65344 - 66189 1152 281 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 6 281 21 286 286 223 43.0 5e-58 MSELNLKKNEVIKGWAKYYLTAEVNSGFERLTAPAFSYGMSAILAKLYKEDEEEYKKALQ RHLMFYNSEATWGSVIFGMTCALEEERAIMLQEGAGSEELEASADMISNLKVGLMGPLAG IGDTINHGMLRPLLLSMFIPLAAEGNWLAGVGPLLIWGVAITFLAYTLVTKGYTLGRKSV VSILKSGKLNQFIKTASVLGLFMMGALSSTYVKLVTPISWANAVGEKQLLQDVLNKIFPN ILPLLVVFGIYFYIKKSGPKYVRILVSILVLSVVLSFFGIV >gi|312955264|gb|AENW01000043.1| GENE 57 66191 - 66964 1012 257 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 5 246 6 248 249 192 42.0 5e-49 MNIGLALVFGVLYWLATNKLWYGTLHLVRQPLVLAVPIGLIMGNLGDAMKIGASLQMIYL GAIAPGGTLPADEALASCITIPVALAAGLEPDIAVTIAVPVGLLGVLLDNLKRTYHSYFV HLADKAAEKGDMKAMGRAEFWYPFFCSIPLRVLPTTLALLFGTDAVSAFLNAIPAWAMNG LSVAGGLLPALGFAVTIMVIGKKELIPYFILGFAMYAYTGMNTIGIAVIAICIAILQSQF TNSTGSTVAVDDDEGDF >gi|312955264|gb|AENW01000043.1| GENE 58 67072 - 67566 734 164 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 160 1 160 161 125 41.0 3e-29 MTEIKLIRIDFRLMHGQVVTNWIKQVSADSILIVDDKLAADKFLAQVFLMAAPPGVKVAI RPIEKAVAAFKKDVFKDKKLLILFKSVENAKKAFDLGFPMKALQVGGLGNGTNKVMISNE LSLSEQEAEMLEAMQNEGVAVTLQVTPKDPAFTLHDALKEVRGK >gi|312955264|gb|AENW01000043.1| GENE 59 67572 - 67991 492 139 aa, chain - ## HITS:1 COG:YPO1758_1 KEGG:ns NR:ns ## COG: YPO1758_1 COG2893 # Protein_GI_number: 16122014 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Yersinia pestis # 5 126 3 126 162 67 31.0 7e-12 MIEPITYVILNHGRFGEELIKSAELIAGKTEHIHAVSLLSGMSIEEYYEEVRDYLTGVQG EILVLADLYGGTPSNVGMMLQREFSLHVVCGINLPMLIELILKRNNEECTIQELMEAGLE AARASIIQPNPIAFDEERG >gi|312955264|gb|AENW01000043.1| GENE 60 68166 - 70121 2062 651 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 40 511 20 495 499 135 24.0 2e-31 MDWGILENETEGVRIAGDKMLTKRQYSILSFYVENRGTYVSSNELAAMFDISVRTVKNEL KIVRDFCDSYSSFVLDTLAGKGTRLCVLDDAAFEKDMEILRKKTLQLSCNTKNRVHSVMK MLMDATGYVSKYTLTETFYISESTLYHALNEIKKLLKQYDLALVHKTNLGYKIEGREIDK RMCIAKNEINDESTDHFALSEDVSNIYNVVADVFFKYHYQINEQTIQNITAHIALTLRRV RKGHFIEQQMEQDMPDSTEYQISTEILTRFLTRYRIKKQYMMNEINLLTQTILGKLDYSR NDHLQKEVNDFINDSFLYIRNKFCVNFEPAESLKLFLALHLVPLIYRIKSGTQLNNMMAP EIKQSFPLAYDIALYFTLLIKERFHLNVSADEISYLSLYFNYGLENIHLGNSAKKILIIT SLRKSETVLLRHKILTWFPNQIAEITFITGDNDDFDTEDYDAIFSTDRNSEKYKGGITLI SIFPDEKDFEKINLAINGYTDTDSILEKFSEDCYFYGEVKDKEEILDIICRNAIEKYKLD DEFLEVIKAREQITSSYFGNCIAVPHPLTPFSDETFVSLGVLKKPIAWDKNHNVRVVMLV SIEKNNPKAFQFWYYMSTFVRNEELLQNFFKKPSFLRFTEILKISLEKDFD >gi|312955264|gb|AENW01000043.1| GENE 61 70310 - 71683 1405 457 aa, chain - ## HITS:1 COG:SP1939 KEGG:ns NR:ns ## COG: SP1939 COG0534 # Protein_GI_number: 15901763 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 3 434 8 439 456 296 40.0 4e-80 MKNMTQGNVTKLIMAFAIPVLLGNVFQQFYTMADTMMVGQILGVNSLAAIGASASLSNLV IGLCTGVSMGVSIMIAQYYGARDEEGMKKATAGCIKLCMISVVVIFVVAILLKKPLLYLL QTPSSILGMADSYLTIIIVGLFVTMAYNMMASMMRSIGDSRTPLYFLIIASILNVALDYI FIAIIQLGVAGAAYATVIAQLVSVILCFLYMRKKYPMFIVKKEDFHVEREILRKQLSMGI SMGLMNSIVSLGSVILQSAVNSLGEVTIAAHTAARKVVEMFMQPLISIAIADTTFVSQNL GAQRFSRIRAGMKSSVWISFLWVCIVVLLSFTCIDFFIGFLVNAKQTEVISLAAYYTRIS SVFYFILAVLFIYRNGLQGLGNGRGPIISSCIEMAVKIAATFALIPFTGYTGVCLAEPIA WSLMGPCLMVFFYRDLKRKEQQLEMHTMEAYQKIELP >gi|312955264|gb|AENW01000043.1| GENE 62 71996 - 72775 843 259 aa, chain - ## HITS:1 COG:no KEGG:CPE0727 NR:ns ## KEGG: CPE0727 # Name: not_defined # Def: hypothetical protein # Organism: C.perfringens # Pathway: not_defined # 1 214 1 232 268 146 41.0 8e-34 MEFKDNLYRIRKEKGMSQEELAALCDVSRQAISKWENGTANPDMENLKTLSRSLRVSIDE LLGNKIPLEKEVVKEKEVIYVHNRYTYEKRYRSKLSICGIPLVDINVGRGRTEEGYWRVA KGIIAIGNVSVGVISIGLLSVGLCSLGLLTLGLLFAIGPLALSYFAIGCLAIGYISIGAI AIGVYSIGAISIGFKFAIGALAYGEIAMGTNPVGDIVYHLRSSNTCFLDSQEYLQFQEYL SRESLPKIIEFFVQVIPLC >gi|312955264|gb|AENW01000043.1| GENE 63 73320 - 73739 516 139 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1132 NR:ns ## KEGG: CDR20291_1132 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 3 139 4 140 140 157 51.0 1e-37 MEKNRKCVMVMDASLAPGIAANTAALLGMTLGSKGKEAIGCDVQDADGNIHMGILQIPLP ILKMETEKLQELRRQLFDQEYKDVIIVDFSDAAQTCNVYEDWIVKAKNLPENQFHYLGIG LYGDKKKINRLCGSLPLYR >gi|312955264|gb|AENW01000043.1| GENE 64 73709 - 74623 201 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 13 285 6 277 290 82 25 2e-14 MNERIKGHMLACMTILIWGTTFISTKVLLRDFTPLQILFTRFMIGYLALWAVAPRLTRVK EKKEELYFLAAGLCGVTLYFLMENIALTYTQASNVGIIVAVSPFFTMFFGIWLLKQTRPG VRFFIGFLIAMTGILCISLEGSQNLALNPKGDLLALGAAIVWALYSTITKKISNFEYTTI PMTRRIFFYGLLCMLPVIMLSGMELPKVEQLTGLNIANILFLGLGASAMCFVSWNSAVRI LGTVQTSVYIYAVPVVTTLASVWILKETVTIVGVLGIVMIVLGLLLSQNRKGERVWRKTE NASW >gi|312955264|gb|AENW01000043.1| GENE 65 74616 - 75491 991 291 aa, chain - ## HITS:1 COG:BS_ybfI KEGG:ns NR:ns ## COG: BS_ybfI COG2207 # Protein_GI_number: 16077291 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 19 285 4 272 275 220 44.0 2e-57 MLPYIQRQKEGMGMAALQEQRHIYYDKDLQIEAYNLSGIVQKFPVHFHEFYVIGFMEGGK RHLWCRNQEYDTQRGDVILFNPRETHNCAPVAGEVLDYRAINVPVDVMDKAVKEITGKHI HLQFKDTLIPQAELALSIRELYDVIVSQSSLLVREEAFYFLIEQLLEEHMVPVEASRELT EAVKAMKEYLDTHYEESISLDTLSKISKMSRYQLLRLFTREVGVSPYRYLQSIRIAKAKR LLEQGEAIGKLALDCGFSDQSHFTNYFKSFIGITPKQYQSIFTQKRSELDE >gi|312955264|gb|AENW01000043.1| GENE 66 75927 - 76694 788 255 aa, chain - ## HITS:1 COG:lin0770 KEGG:ns NR:ns ## COG: lin0770 COG1940 # Protein_GI_number: 16799844 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Listeria innocua # 14 247 53 286 288 193 38.0 2e-49 MKAYKKDITMQGGTLSGVAISSCGAVNCDSGVIGGSSAVPFIHGFSWKERIQRELGLCCE IENDANCAALSELFYGKAKNIQDMAFLVIGTGVGGAIVRNRNICHGAHRYGGEFGMMLVK QPDGSVQNFSLCASTSSMVRKMEALTAEEWNGVRIFEEAQQGYELCSKVIQTFYEELAFG VFNVQHMLDPEMILFGGAISARRDFTQRIMEAYEKLQKGLDFATLTPRLECCTYRQDANL LGALAHYRQRRGLAE >gi|312955264|gb|AENW01000043.1| GENE 67 76823 - 78196 1413 457 aa, chain - ## HITS:1 COG:BS_ydhP KEGG:ns NR:ns ## COG: BS_ydhP COG2723 # Protein_GI_number: 16077651 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus subtilis # 3 457 8 465 465 573 60.0 1e-163 MLQFPKGFYFGSATSATQSEGASAIDGKGKNIWDIWFEQEPEKFHDRIGPKEASGFYTQY REDIRLLKETGHNSCRISISWSRMFPRGDGELNPLAAAHYHNVIDAFHEEGIEVMINLFH FDMPAELQKQGGWESDHVVDAYVEYARTCFSLYGKKVRRWFTFNEPIVHVECGYLNGFHY PCRHDMKAAVQVAYHTALASARAVQAFHAMCDGKIGIILNLTPNYPRSQAKEDVEASRIA ELFSARSFLDPAVLGVYPKELVELLKEHTLLPDYEEQELAVIKENTVDFLGVNYYQPIRV KAKETPMDPAAMITPESFYDFYEMPNRRINPYRGWEIYPKGMYDIATNIRTKYDNIEWMI TENGMGVENEARFIKDGRIEDDYRIDFYKEHLTWLHKGIEEGSNCIGYHVWTGIDCWSWL NAYKNRYGLISIDLETGKRTIKKSGCWFRELAEKRGF >gi|312955264|gb|AENW01000043.1| GENE 68 78429 - 79232 936 267 aa, chain - ## HITS:1 COG:SP1674 KEGG:ns NR:ns ## COG: SP1674 COG1737 # Protein_GI_number: 15901509 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 17 245 18 251 283 80 26.0 3e-15 MEKEILLRINLAKVNFTYVEETIAQYFTDGRKPLTIHELARELSISSSSITRFCKKIGLN NFKELMYLYEQHLNMQNAPQISNISLDLQSEYFRIFHLVDQNFDAKAMEQVCRYIYEHRI INIFAFGLSATAAEDFRFRFSRLGKFIEVIHDKDAIKMSSRVLQKQDLVFIFTLRGNTYL EELAAELTLRGILVVSILGNQNSRLKKLSDVVLYTSSLSGEESTGMISGQIPILIMIDML YYHYVRTYSDALTNWASTEEILKDRKE >gi|312955264|gb|AENW01000043.1| GENE 69 79265 - 81874 2340 869 aa, chain - ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 1 864 4 872 877 416 31.0 1e-115 MKKMHVYSHTHWDYEWYFTASESIIQLIYHMDEVISALESGTLKTYLLDSQVSILEEYLH MMPEKEPVIRKLVEEGKLMIGPWYTQSDELIISGESLARNLWYGISYARELGNCMMIGYL PDSFGQSKDMPKLYNGFDIREALFWRGVPNDVCKQREFYWHNTDGSEVLCYHIRDGYFYG GNLIYTDDVDKVENRVLNGASTTHQLLPLGGDQRYVDFNLQERLNYYNERSTHDIQYFES DLESFFKELREEEGLPQITGEFIDASVSKIHHSIYSSRYDHKQLNDIIERRMIYQLEPFM VMQMQMRIKPKTSLLRKLWKKVLLNHAHDSACGCNSDATNDAILQRLRDCDQMSSMLLDY QVRKLSESIEGIREQDLVFYNTLPYTRDDVYQVSVSTKARHFRIVDEAGCEVVYDCLGTQ RVYSGSIRRDPSVYDEDLYYYQSDIRIAMTMKPMSMRILHLEACEHTEQLQECSALENTF YKITMENGSLRLLNKANGKVVEDFLYVEDSGDEGDTYDYSWPAHDHIYTLHFQDAQAEWK HGALADTLVLHGAWQLPENLQERVDGKCSQDIAYTLCIQLHQASDVLQCEMTIDNTAMEH RMRVILRGLSSSSCSIADTPFGTIQRAHDPKHMEDWKEAGYREEPTPIYPMLHHVSNGTN QVLTCFCKGIKEYEILKHTDIALTLFRSVPLLGRPDLNRRPGIASGNEFKYIPTPKSELR QTMSFSFALCLRNGYDAMEVQKTWLRYANDVLFYQLQEVNRFVNTQKYFVTHPYPNAVKP LHSAILNMDKSDCLQFSSLYPLDDKQAILRVYNSRNEMVKEDSLCYTGETIQQTNMLHEP IADCEAEQHPVTLSNIQPEEIRTYKIIVK >gi|312955264|gb|AENW01000043.1| GENE 70 81888 - 82340 585 150 aa, chain - ## HITS:1 COG:BS_fruA_1 KEGG:ns NR:ns ## COG: BS_fruA_1 COG1762 # Protein_GI_number: 16078504 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus subtilis # 5 145 6 146 169 82 29.0 3e-16 MDKSVFDRHHIQFDTEAKTQKEAFHVIAHAAYEAGYVKDENAYFEGMCEREKEATTGFQD GIAIPHSKHATCIKPGIFLVKFEHPIAWNALDGEPVQVALGLTIPEDGGDVHLRILSKLA RKMISEEFRTALKTGTDVDALYEVIAAVEL >gi|312955264|gb|AENW01000043.1| GENE 71 82353 - 83825 1858 490 aa, chain - ## HITS:1 COG:SA2434_2 KEGG:ns NR:ns ## COG: SA2434_2 COG1299 # Protein_GI_number: 15928227 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Staphylococcus aureus N315 # 124 474 1 328 371 193 36.0 6e-49 MSKHIVAITACAAGIAHTYMAAESLEQAGKKRGDSVRVETQGSIGAENVLSEQEIKQADV VIVAADIDIDCARFAGKRVMKVRSVDAIKDANALIERALNEATLYGEKGSKAGNITLGKT ENPIIKHIMSGISYMVPMCIAAGLLLAIANVFAFQKDDLGRIVNWGFDNKTAMGYFMQKL FMVGQTGFKLMIPLFAGFVAKSIADKPAIAPAMIGAYIANDPEFLGTQTGGGFLSAILVA FIVGYFVKGMKRIPWPKIVQPLTGIMIIPFVSTLVIMIIVLFLIGQPIAFAMDALYSGLT TLNEQYAAAPFIIGAIIGAMVGFDFGGPVNKTALIFGTAVFTDTMTKYGVQGANFVPQSA TQAAISVAPLGIWLASVIFKNKFSKTEKISATSAFGMGMVGVTEGAIPFAAANPLQMITA SVAGSALAGGLVALTGCKFYGGIGSPLGTFIGYIEQPIPFITWILCVLAGIVVTALIIGF WRKPVVEENE >gi|312955264|gb|AENW01000043.1| GENE 72 84279 - 86303 1280 674 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 612 1 604 636 497 45 1e-139 MNNKKFISFLPYILVLGIMLLLISYGSEGNTKNFNYNEFMTKANTMTFTKAEMSMGTTVI DVKGSYSEKGKDVNFTVRVPNTEKNVSYLTDVFKKSKSTNLTVSDPNRESLLMKFLMNVF PFLLIAGVAFFMFSKMNAGGNNKAFEFSKSRAKIEGNIKVRFKDVAGCDEEKEEVKEIID YLKDPKRFTDMGARIPKGMLMVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEMFVGTG ASRVRDMFKKAQQTAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTLNQLLVEMDGMGENK GIVIIAATNRPDVLDPALLRSGRFDRQITVNLPDKRGRYEILKVHARNKKLAPNANLEGL AKRTPGFSGADLENVLNEGAILAVRDKRKVITMEDLDEAIDRVMMGPAKKSKKYTDREKR LVAFHEAGHAVIGLKLDDADKVEKVTIIPRGEAGGYNLMTPKEEKMMPTKADFMAQITGL MGGRVAEEVMFDEVSAGASNDIQKATKIAKAMVRSWGMSSLGPIQYDDGTGNVFLGRDYG SGSNYSGEIAYEIDKEIRKIINECYDRAKQIIEDNKDLLTLIAETLIEEETITSEQIYNL MNYGKLISPEDEVRAAEAKAKAAEQKLKDLEAGITQEDTAEEVHEDVQDSKEPDIDFDAA LKELTKNDYDEHKE >gi|312955264|gb|AENW01000043.1| GENE 73 86324 - 86863 734 179 aa, chain - ## HITS:1 COG:L25115 KEGG:ns NR:ns ## COG: L25115 COG0634 # Protein_GI_number: 15672002 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Lactococcus lactis # 5 178 10 181 183 190 62.0 1e-48 MHDVVEKVLVSEEDIVKRSMELGKQISDDYRKTGKAPLLVALLKGSVPFLAELIKHIDLD IQFDFMDVSSYEGTESIGDIKIVKDLDCSVKGVPILLVEDIVDTGRTLKEVTRLLKNKGA SDVKVVSLLDKPDRRVVDITADYVGFEIPNEFVVGFGLDYDQHYRNLPYIGVLKPEVYK >gi|312955264|gb|AENW01000043.1| GENE 74 86891 - 88102 1365 403 aa, chain - ## HITS:1 COG:BS_yacA KEGG:ns NR:ns ## COG: BS_yacA COG0037 # Protein_GI_number: 16077135 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Bacillus subtilis # 4 384 15 438 472 159 28.0 7e-39 MKKLEKGTYIIGVSGGPDSMALLDMCRKEGFQLVVAHMNYKKRDTADRDMELVRSYCARF HIPFEARLQTKPCVGNFQAFAREERYRMYRELLQKYQAAAVLLAHHLDDHLETYLMAKER GSMKEYLGIQEEACIMGCTIIRPLMAYSKRELEAYCRENAVPFGIDESNLTDHYARNRIR HEIVDRMSEKEKEALMEIISRENMRMQQLRADCRAFLNSWDGSLKKLRVLDSYFLEQVLI TWIHDTCSCYLSMHEIQVLRELIMNNANYWTRDIAGGYDIYSEYGKLVIDTSEEISYSYV YDHAVFEKTPYFETAPHGTGVEAVTLQATDWPITIRNAQPQDAIQLRFGVKKLNRWFIDR KIPKKERKLWPVVVNAAGNVILVPKIGCDIAHFSNNPTLFVLK >gi|312955264|gb|AENW01000043.1| GENE 75 88279 - 89049 609 256 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1596 NR:ns ## KEGG: EUBREC_1596 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 2 253 317 584 588 162 36.0 8e-39 MYLDKLMKTDKQTPESFWANTSGNDIIYRYVKEASSKMREEFDILASGGVIEKTIKDNIT YRELDQVNNIYSFLLFTGYLKAVQCTDQEKGIYQLMIPNKEINRIYTMIFREWFEQQVMQ NSIKFAEALMVEDVKAANKVLNDVLFQSISYFDYNERFYHGVLIGMLNDYQVVSNQESGE GRFDLAVLPAYAKERGLLFEVKVVKNMEHMEIAAEQACRQIKDRKYLEGLYKKGYTDIVA YGIVFCKKSCLIVKAE >gi|312955264|gb|AENW01000043.1| GENE 76 89141 - 89410 202 89 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0955 NR:ns ## KEGG: EUBREC_0955 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 89 200 281 564 87 50.0 2e-16 MVAFLGNVFSAALKTNDALEKGILTGCLRIAKESTPQAGFSLFTGLNNFKVLSIFDETSK QRFGFTQNEIDSLLLDYQANEYQGQVKEW >gi|312955264|gb|AENW01000043.1| GENE 77 89476 - 89763 225 95 aa, chain - ## HITS:1 COG:no KEGG:CLH_3192 NR:ns ## KEGG: CLH_3192 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 95 85 179 563 65 42.0 5e-10 MKLQNQYPVIFLTLKDMKNNTFEKQLTMFSYLMQEIIRNNHELLTSERINEFDKERMKSL YRGAQNEVELQNALRFISGCLEQHYQKQVIILIDE >gi|312955264|gb|AENW01000043.1| GENE 78 89893 - 90075 154 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|218281524|ref|ZP_03487953.1| ## NR: gi|218281524|ref|ZP_03487953.1| hypothetical protein EUBIFOR_00518 [Eubacterium biforme DSM 3989] # 1 47 7 53 558 73 74.0 5e-12 MKALPIGIENFKEMIDHQYYYVDKTNFIKDVCNEKVALYTRPRRFHRNSVDTFGIRQEAR >gi|312955264|gb|AENW01000043.1| GENE 79 90307 - 90768 290 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVCLCGCSSAGEKLKIEVTQQPVVMESHTKALLDKQILSFSLTQPVSEGYSVAYEGNCVI NADGTLDRENEVTVFTSIMKENTVLANDTKHIGIANIDSNLTIQDENTLLLITTVHYDDP DGDVIFHYLEHMTLAVKQNKGTYHIEITEVTMA >gi|312955264|gb|AENW01000043.1| GENE 80 91062 - 92930 2063 622 aa, chain - ## HITS:1 COG:BS_spoIIE KEGG:ns NR:ns ## COG: BS_spoIIE COG2208 # Protein_GI_number: 16077132 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Bacillus subtilis # 278 620 429 805 827 104 24.0 6e-22 MEKVMNKRLKGKFSIHAEDLACAGISIILGTLASPLSYTLAFLYVSYSYMRTIREAMISV FFILLCSLTRGILPAYSYALGFACYFVIIHMVKVMNQNLYQWMPYLTALLSAAFSVQQYG LHNTAVILPVLSFVLMQELFADYQWIQKGMLHNACMRGILLFTIGLLGVELLPVYAQEVI MITMLLIALSSNAWITVTVALMIYFLLDIRVLPALVLTVLLSVLKKDRKSAMLLLLGACF LYPDNTEDLIYLLLCMSGVLLVPANAASLHMSTELQNEQEYRLSQTSMLKRQMQNYANIF QSLSEYYAQISDVQAELLANMSNALQYNADAIRKIDGYEKDTVRVAKALEGYQYDVRELS IEEPKEGCIQVCVEIANIKRGEIRTTLLPLLEVLLHRNLQIADIRNRKFMRGYHSITVCD DIPFAIDAYADSVKNSYTSSGDTFSIFRFRQSVVCMISDGMGNGERAAQSSRLITNIFQR MMVSGIPQDSAIKCINKLIQSDTYATLDVICFNRSQGVAYISKSAACPTFLLRDDQIYEI NGSALPVGIISQMQPDCFQVDVKAGDEYLMISDGIYMNEIYKWLNQRTQTSVKADVESFT ELLKKTRRKDDSTIVLARVDEV >gi|312955264|gb|AENW01000043.1| GENE 81 93094 - 93663 616 189 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916163|ref|ZP_02078370.1| ## NR: gi|160916163|ref|ZP_02078370.1| hypothetical protein EUBDOL_02190 [Eubacterium dolichum DSM 3991] # 1 189 1 189 189 300 74.0 2e-80 MEVKKLYEMVDEDQKEGSLGEKAYWKDLWECYIEEKSMDYASLSVKEAIPRLVSEQNLRE RRHAGSCGELGVDIRVGDICYIDFGEAYISEIGYQHFGLIITIFHNKAFVVPMSGNHTAY LQAYSKENPKGKRHLMRLGKIKGMNKESVLFINDAKWINTARIIDVKAHLRRDSELFREI KDRVKNCLD >gi|312955264|gb|AENW01000043.1| GENE 82 94127 - 95227 1234 366 aa, chain - ## HITS:1 COG:SA0702 KEGG:ns NR:ns ## COG: SA0702 COG0472 # Protein_GI_number: 15926424 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Staphylococcus aureus N315 # 9 340 9 341 351 229 42.0 6e-60 MDWLKYLIIPLALSALITPFLKIVAYRLDIYAQVNERTVHKGKIARIGGVAIYISFVVCM AVFMKTDMTINGILIGGTIMFIGGLIDDMVNLKPKYKLAFEVAAAIVLMTVGKVSLDVIR LPMGISIDMGLVSFIVTFVWIIGITNAVNLIDGLDGLAGGISAIILVVIACLSVIEGRLD IQTMSLILAGATMGFLLYNSHPASIFMGDCGALFLGFIISAISLLGFKSSTIMTLALPIL LLAVPIVDTIGAILRRKLSGHKFSEADKNHLHHLLMQRFGHRNTVIILYVVTALFGFTAY IYLINKATGFLVLFIIALVVELFIEFSGMISKQYHPLLSIANTIQKRARKLYRKFSKKSP DTKQEK >gi|312955264|gb|AENW01000043.1| GENE 83 95250 - 96236 1263 328 aa, chain - ## HITS:1 COG:BH3739 KEGG:ns NR:ns ## COG: BH3739 COG1077 # Protein_GI_number: 15616301 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Bacillus halodurans # 1 324 1 324 334 403 60.0 1e-112 MFSKEVGIDLGTANLLMYVKGEGIVIDEPSVVAIDAETKKCLAAGQDAKDMLGRTPGRVL AIRPLKDGVIADFEVTEIMLNFFFKKLAIKGMFKRPTILICCPSNITSVERNAIRDAAYR AGAKKVYIEEEPKVAAVGAGLDIGKPSGCMVLDIGGGTTDVAVISLGEIVSSTSLKIAGD TLDRDIIKFVKENKKLLIGDRTAEEVKKQIGTAWKGSMHETIEVSGRDLVTGLPTTITLS SEEIQGSMAESLQDVVRACKTVLEQTPPELASDIVTRGIVLTGGGALLHGIDELLRNELH IPVYVAENALRCVAEGTGILLENLHLVQ >gi|312955264|gb|AENW01000043.1| GENE 84 96498 - 97121 726 207 aa, chain - ## HITS:1 COG:BH3746 KEGG:ns NR:ns ## COG: BH3746 COG0739 # Protein_GI_number: 15616308 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Bacillus halodurans # 37 196 63 224 284 72 30.0 7e-13 MYSYTKEKKFPKRRLIVSLSCLLIAAAAFLTYEYSMKNPAKDTSVFKEDTTPVLSLPSSA EEEKGIQPFAVKAEVVLDYFDGKDSKVDSMTKFEGVYRANQGMDYSFNKEAFDVLASFSG EVSDVKEDNIFGKSVTITSKDLSITYQSLSDITVKKGDKVNQKDPIAKAGSNIYNKELGN HLHIVVEKNGKIIDPELMYGKTNAEIK >gi|312955264|gb|AENW01000043.1| GENE 85 97170 - 98111 836 313 aa, chain - ## HITS:1 COG:BH3748 KEGG:ns NR:ns ## COG: BH3748 COG2385 # Protein_GI_number: 15616310 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Bacillus halodurans # 5 310 1 321 336 211 39.0 2e-54 MKIAVKFLLVLSIILVSFFLWLNMGTSSPILWNTGKESVQEQEKKDKEKAKDKEQTVHIT RQDGTSLKLPLETYLEGVIGSEMPASFEMEALKAQCVAARTFVTKRGFEVDDTTRTQVYH DDKQMRQIWGSSYDKMHARVVKALQETEGEIMTYQGEPISAVFFSGSCGKTANSEEYWDS RTPYLRSVDSHWDKEEDGYEKTAVISEEDFHTMLGFENPVKEVGKPSHYASGYVKSITID RIVFSGREIREKLNLRSSCFSIKKTSGGYAVTTRGFGHGLGMSQYGAQGMALEKKNYKEI LKHYYTGVQIVKE >gi|312955264|gb|AENW01000043.1| GENE 86 98155 - 99735 1872 526 aa, chain - ## HITS:1 COG:SPy1587 KEGG:ns NR:ns ## COG: SPy1587 COG4753 # Protein_GI_number: 15675474 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 519 1 482 494 144 28.0 6e-34 MYKVLIADDERLIRITLKNMIDWKALDCEVIATAKDGEEAFHIFTDIQPEIVITDLKMPG MDGIDLISKIKEVNKNTQVIALSNYSDFEYVRDAMKAGAFDYLLKVTLEKKELERIITQV KESCVESSLNDHVEYESALKELQQCLILTKNEHILSRKEFQEALSQPVFEPYQKGFQMAY FRVDNINHLYRTKLKDHAALHKHLQDLIRESMPLAVHHHLIFMSNHSGILMFESREKLRI LNICNSIIRNITQYLDIHLSITLSDIIASLDEYYDQFELLLKSHERRFYVGEGCLIQSEE HDAFQELDMNEVTFHLELLDAVAAKDFNTVQHKLKETLEYMKFHEIDPHAVLEYFIFIFH NIEGNEMARGIRQAFPFDTITAKLRLCETADKLEEIVSSSFDQIEAWMKDQSNRRYRRKI LEVMEYIDANLNRKLTLKEIADSIGMNESSLSRLFKNETGVNLNYYINEKKMKKAMELLR GESSMIKDVAAAVGMDDQLYFNKVFKKYYNVSPSEFKKKLHPDTEE >gi|312955264|gb|AENW01000043.1| GENE 87 99741 - 101414 1899 557 aa, chain - ## HITS:1 COG:BH3447 KEGG:ns NR:ns ## COG: BH3447 COG2972 # Protein_GI_number: 15616009 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Bacillus halodurans # 201 550 220 591 602 165 28.0 2e-40 MLRGNRNLLRRTDIKTRLTLAFIFVPLCLMIVFFLIYYSFSTTVIRDKNEQASAQMVTMS EEIFHLNANALNEQIDNLAASTYLRNYLYYPADTAMRRAFSHNLHDNDLLAGRKGLQLYD ETGKLLYEEGTLFPVDLKAYKAEIQAQKQGGYWLYDNEAQMIMLTREIRDLYDQPLGYVF CSFAQEAFNASLSQSTQAGSHMLVVDANGQVLFGSNPDDIKEIIDLQASTVEIDQHSYYM SDKKIEGTPWYVVYLNDENYVLEEIHNFRNMLVAYGIVFFVLLAAIAYFVYHSIYDPVHN ILYSMRTLDENNLAMNRVEDDGRDEIHELSINFNDLLDRVQELLHTVHQEQEQKRETQFQ LLQAQINPHFLFNTLNTLHYLAILNEDKPVSEGITALARLLRNTIVDSKEVVTVEEEIEN LKNYIIIQKLRYGDVFETVYNIDDNVRSCAILKFLLQPIAENSILHAFEEDREHQILTIR AKAEGKYLKIEIGDNGKGFALDMQENRNKKLSGIGIGNIQERIRLMYGEDYSMDIQSVVG TGTIVTLLLPFKKTEGR >gi|312955264|gb|AENW01000043.1| GENE 88 101477 - 101680 370 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYFLMNLAVHVLSFTLSFWALSCVRFETFTNVRKPGQVRLLLLLLSLGLGYLVAQFLLA ISVYNGL >gi|312955264|gb|AENW01000043.1| GENE 89 102378 - 103352 908 324 aa, chain + ## HITS:1 COG:STM4265 KEGG:ns NR:ns ## COG: STM4265 COG2207 # Protein_GI_number: 16767515 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 5 111 4 106 107 83 38.0 4e-16 MYEWQKQIQIIVDEIDSCIKSYQDEALTLRTLSQKLGYSEYYTTRKFKEISGMKLREYLR QRKLAFALKEIRDSEKSILKIALDYGFSSHEAFTRAFKAAYGRTPSAYRKQPSPVVLRTK INPFDRYLLGLDELGEINSAKAVKTYFVTIPAHKFLFIENRESNGYWDFWQKQNQIPGQD MDTVCGLLDSIKGKLDDSGGSDINSGGGQIMAYRNDRNGRLCDWGYLRTECYGVRLPVHY TGDVPHDMQLLDIAEAEYLVFEHGPFDYEQENRSVEHRMEDAMTAFDFTNTGYCFDDTPG RMLYFYFQPERCWKYICPVKKRMQ >gi|312955264|gb|AENW01000043.1| GENE 90 103708 - 105198 385 496 aa, chain + ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 2 480 1 466 477 88 24.0 4e-17 MLSEKELLNILDNKEKVNVEFKEAKRGVPKSIYETYYSFANTNGGMIILGVKEIKTGTAV NYEISGVENANSIISDFWNTINSGKVNRNILKDADVYSLTVQGLELVILHIPRALYNQKP IYIGSNPYAGTFKRNFEGDYRCTKESVNSMIRDSFQNAGDNEILEWLNIGDLDKNTIAVY RTRFRNNNEGHIYEELSDKDFLTKMGAYRFDKKRNIEGVTSAGVLMFGKTETFNEIYHNV NLDYRDETNLFGDMRWSDRIIENGLWEKNLYNFITKVYPKLISEFPVPFQMKDSLQRNDE TKLQVAAREALVNSVIHADFKEESCSILVIKKDNYISYSNPGLLRIPIEQIYQGGVSVPR NITLQKLFRFIGFGESAGSGYDKILAPSRAEGFQVPELYENQDMRITNLKLWIVKKEHGA LSGALEKPNHILNEKEQIVLNVIREFPNLNRKKIFEKTKIPLTSLDRYLDKLIALDLIQK KGSRKTVSYNVKNTDI >gi|312955264|gb|AENW01000043.1| GENE 91 105475 - 105945 462 156 aa, chain - ## HITS:1 COG:TM0349 KEGG:ns NR:ns ## COG: TM0349 COG0757 # Protein_GI_number: 15643117 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Thermotoga maritima # 3 153 2 142 144 145 49.0 3e-35 MRKLVIVNGPNNNFYGIRNKGQYGNQLYADLIEELKEYGASIGFEVEAFQSNGEGALIDY FQSLYFEAEKSGCKIPLVLNPGAFTHYSYAIKDALESVHTLIPAIEVHMSNIHGRDDFRH ISVTASECLGQIAGMGKHSYKIAMEAFKQMIEEGQL >gi|312955264|gb|AENW01000043.1| GENE 92 105956 - 106330 424 124 aa, chain - ## HITS:1 COG:no KEGG:BMD_3606 NR:ns ## KEGG: BMD_3606 # Name: not_defined # Def: hypothetical protein # Organism: B.megaterium_DSM319 # Pathway: not_defined # 4 124 8 129 130 101 39.0 9e-21 MATYVEHTACKVKDLDWCVKFFTEVFDMPIRLSLGEKPNRKIWLHAGIQLNEDITFDEKE GRLDHIALMTTDYENVFEKCLAWGCTVLPAGDNWLKMPNGIVIELKRGNNEVLHTIISQK PWVD >gi|312955264|gb|AENW01000043.1| GENE 93 106335 - 107291 1218 318 aa, chain - ## HITS:1 COG:AF1695 KEGG:ns NR:ns ## COG: AF1695 COG1893 # Protein_GI_number: 11499285 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Archaeoglobus fulgidus # 2 305 5 291 294 137 32.0 3e-32 MKIVMLGAGALGSTIGGTLAMGGNDVHFVDMWQEHVDLINKDGLHMTNEKEDWYVRVDAR TTADTIGEADLVIVLVKSFATKQAVEQLKQTNVIGKNTLVMSLQNGLGNEETIASVIGSE NVISGKTYVGGRLIQAGYISAGVQGKWTYIGELNGEITDRIQTVCNVFNDAGLLCEVSDN IKGLIWDKLLINVAAGALCGITRLPYGPLYEEDYIKDVAVAAIQEGIQVAKAAGVVLKSE DPQYPWVAASEGLPGTFKTSILQSLELKRPTEIDFINGSIVEWGKKYGIATPVNQTLVAC VKGIEKYILKYEPSLKKG >gi|312955264|gb|AENW01000043.1| GENE 94 107307 - 107765 407 152 aa, chain - ## HITS:1 COG:mll7145 KEGG:ns NR:ns ## COG: mll7145 COG2030 # Protein_GI_number: 13475950 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mesorhizobium loti # 24 143 21 140 148 95 44.0 4e-20 MAEKKEITKVDIPLKIGDSAVFEKTITETDVVLFGGLTGDYSQMHFNEEYMKKTMYGTRI AHGILTFAIGCTASTKIQEQVKSPVPSASYGYDKLRFINPVYFGDTLTCRYTVDRIEEET NKTYSKLEIFNQKGEIVVFAIHILKFFPLEEK >gi|312955264|gb|AENW01000043.1| GENE 95 107878 - 109461 1843 527 aa, chain - ## HITS:1 COG:ydiF KEGG:ns NR:ns ## COG: ydiF COG4670 # Protein_GI_number: 16129650 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli K12 # 7 518 10 522 531 630 60.0 1e-180 MSKIKRNGTKPQVLSAREAVEYIADQDTVAVSGAGGGIVDPYALINALHERYVETGCPKN LTLWHSTGLGDRNDRGMSPLALEGLVKRVIGGHWGQSPRLAEMASENKIEAYNFPQGIMA QLARTAAAGQPGILSHVGLGTFIDPRVSGGKLNEVSQEDLIRVMNVDGKEWLYYPVVPLD VCLIRATTADTEGYASMEEEITYIDVLQLAQAVHNNGGTVILQVKRLVKAGTLHPKSVKI PGFLVDAIVVEEKQEQLYNGSDRFFSGDYIADDSAVTMLPLDQRKVVARRALMEVRPGYV GNVGVGIADGIGNVAREEGVQDAFTLTVETGPVGGATAQGIFFGATVNARAVMDMPAQFD FYDGGGLDVAFLSFAELDENGDVNVHHFNGKIMGTGGFVNIVAGSKKVVLCGTLRAGKLL TEIRDGKITIQQEGRFEKLIKNVSSVTFSAKQAEKQKQEVIYITERAVFKLMNGKVVLTE IAPGIDVQKDVIDQMGFVPEIAEDLKEMDARIFREEKMNIYNEFINQ >gi|312955264|gb|AENW01000043.1| GENE 96 109643 - 110515 691 290 aa, chain + ## HITS:1 COG:ydiP KEGG:ns NR:ns ## COG: ydiP COG2207 # Protein_GI_number: 16129652 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 19 290 18 290 303 195 38.0 7e-50 MFLSDILNEKKQSTPVFTKEPIISRLSHSFNDAHWSYPYHVHKQETELIYFSQGKASYQI NNEIFHVSEGDLLIVNKGCIHSITSDYEDPISCWTCAITDFTMANAKAADCFLSLDKKPY AHTGEHKKIIADIFETLEMFSQQKTQSSAAICNALANALAHIYFHIFQNAVTDRKKKKST FAQDILFYINENYASDITLKELTEHFHISSDYISHKFKETYGISPINYVIDRRISEAKWM LINTSDSLISISSQVGYDNTTHFAKLFLKRVGYPPLEYRKRFGMKISSEE >gi|312955264|gb|AENW01000043.1| GENE 97 110914 - 111762 725 282 aa, chain - ## HITS:1 COG:no KEGG:Slin_2404 NR:ns ## KEGG: Slin_2404 # Name: not_defined # Def: protein of unknown function DUF34 # Organism: S.linguale # Pathway: not_defined # 28 279 48 286 287 150 33.0 6e-35 MLIQTVIDHIKEYHKGVFEGKQIDEQTTRDKVLYGNPHQECTGIITTCWASVDVIREAAK RGANLIIAHEALFWNHGDHTDWLQEENNQSFLAKKKLLDEAGIVVWRDHDYIHSGIPMED GSYTDGIFYGVADKLGWTQYITKDIHHPLHFTIPKTTVKELADFLIQKLQLNGVKIIGNK NSTVEKIRIPFHILGDARDSIQEADQENINCYLTMEVVDFTLAEYIRDSSMLGMDKAIIG MGHFNLEEPGMEYMITYLPTAVKADIPCAYIQSGDMYDYRTR >gi|312955264|gb|AENW01000043.1| GENE 98 111784 - 112542 514 252 aa, chain - ## HITS:1 COG:lin1914 KEGG:ns NR:ns ## COG: lin1914 COG2365 # Protein_GI_number: 16800980 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 10 250 53 297 298 89 27.0 6e-18 MEANRITIPNFRRVAGKTADGRNIRNHMLYRSGAPIPITVQDINGMRECGIRHIVDLRSD EECCAHAYQLSDAFVSHHMSALKTRDGLENFYFFMLIDKNSTVEDIKRAASFIHEGYRIL PFHNPALALLLNLMEADDGAVLLHCSSGKDRTGVLAALLQKMLGVKEDVIMQEYLLSNAY ILPDILRHAKELGFQGDTRDMLVHCCSVHESLLRSSFDEVEKRYPGWEEFFEAEYGMSEK RIRNLKKRYLEP >gi|312955264|gb|AENW01000043.1| GENE 99 112547 - 113347 697 266 aa, chain - ## HITS:1 COG:no KEGG:SSON_1293 NR:ns ## KEGG: SSON_1293 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 23 259 24 270 280 84 24.0 4e-15 MKVMDVIQLLEKEGTWIRSDFKTRDHLLHGREDAQIHTVGVCWVATMQAIQEAARHKADM IITHENPFYQCSTQMHTAAYEAAKSKRRLLDQYGISVYRCHDVWDCIRTYGVADQWAALL GFPFEQRPQASYYQAADIPEMRLEDLARHTCRVLHGDHEDGLYVFGNTDMHIRRIAIGTG AATDLYELLPLHPDAVIVSDDGITSYDAAQYALDHGIGMVVVNHAAVERAGLKAMVPWLQ ERMKDAEAVWLHDGFHIHYYMNKVGC >gi|312955264|gb|AENW01000043.1| GENE 100 113450 - 113872 566 140 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 2 140 3 139 140 76 33.0 1e-14 MRRFIFASHHYLAYGLKDTVDFLTNKAKTIYDINAYAEDKEQNLESRVKELFDTFDPQDE VIVLTDLLGGSVYQKFYPYISERVHVLCGMNLPMAMSMVLAQEDVPFSEKRISEILEECK NQIVYVNALRCASTMDGDDE >gi|312955264|gb|AENW01000043.1| GENE 101 113869 - 115095 1171 408 aa, chain - ## HITS:1 COG:no KEGG:JDM1_2587 NR:ns ## KEGG: JDM1_2587 # Name: not_defined # Def: hypothetical protein # Organism: L.plantarum_JDM1 # Pathway: not_defined # 9 400 9 395 413 184 31.0 6e-45 MKAATCVADITPKCAVHLCGYVGEARKYTAKGIHDHPLAVSLLLEIDGVRLLFISIDVIT LGGEKAAVIKDKIQKILTIENDHIIISAIHTHSGANGLDDMTVFGTPDNPEYFAYVCEQI TDSIQHLEQQLCEVQAYITTGKVHGYYSKRTDKHLPFEDHAAIITFIHGDTVVAAMCNFN CHATVLGVENMLVSSDLVGKVRSLMKEDLGVTPYTFTGASGDISNRQYRQGNDFAELDRV GSGIAEILRNMGPYEKLGLHHVQTVSYDHTVSYDNTWYFKEYQKGIRDAEEVLSRKNISL DEWKLATSEKTLLEKKLQCEKVEFHVRGVVLHLGDLTIVTFPGELASTFGLQLRRKCKTK HFLLIGYANDYQGYFMEAQEYGKTYETKASNTPVGESERIAGEIGDLL >gi|312955264|gb|AENW01000043.1| GENE 102 115112 - 115912 818 266 aa, chain - ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 4 257 13 267 275 186 38.0 5e-47 MSKEKVLTKKDLRKAAWRWLIGISTFNYETQLAPSTLFSVYPCLRKMYPDDEDLKKSCLN YMRYYNTMPWISPFVIGAALGIEDEGGISSLDAVNDFKVGLMGPLAGIGDTIGWAMIPTI FGSIAASMGMEGNPLGIFLWAAFTFVFLVVRILQYEWGYGMGVNVITKFGKQITVFTEAC SVLGLTVVGSLVATVVKLSTGLQFKNGDVVMKVQELIDGVMPALLPVAAVGIIYYFMKVK KVKMTWMILFIIVASMIGAATGIFTA >gi|312955264|gb|AENW01000043.1| GENE 103 115905 - 116684 1064 259 aa, chain - ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 259 1 261 267 159 38.0 7e-39 MELSILQIVFITLIAYLKMTDTVTTQLFAFNTIICGWLTGLVVGDPTTGLSIGATMQLMS MGVVAVGGSSMPDYPIAAIIATTIAVTTGKGMEAGLAIGLPVAMLGVNFDVIYKIFNGFL MRKETSLIEEGKFQSALNMIKISPVFYGLCSAVPVLVCIVAGPTVVNAILDFMPAWFTTG LTIAGGVLPGVGMAMLLMYMPLGKYWSFLLVGFVLAAYLKVPVLGIAAIGLAGAYEIYKN QMKAGTAAAGAVAGGLEDE >gi|312955264|gb|AENW01000043.1| GENE 104 116698 - 117177 564 159 aa, chain - ## HITS:1 COG:SP0061 KEGG:ns NR:ns ## COG: SP0061 COG3444 # Protein_GI_number: 15900006 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 148 1 148 158 95 34.0 4e-20 MSIVLGRVDYRLLHGIVATMWAPQSGAQRVMVIDDRTANDPIIKESMRLGKPAGMACSII TEETAMKNFKAGKYDDHKVFVVCEDPGVFLRLQEAGQKIPRIVIGITRDRDSGTKVSSRA SVKDEEKPIYKKLMENGCEVDVQFTTTDKAVKLSHAMEL >gi|312955264|gb|AENW01000043.1| GENE 105 117410 - 120139 2996 909 aa, chain - ## HITS:1 COG:STM0571_1 KEGG:ns NR:ns ## COG: STM0571_1 COG1221 # Protein_GI_number: 16763948 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 22 358 28 361 460 266 41.0 2e-70 MEDNLRKLVKENTIHEKYKLNNASQLGTQLGLSRNWISQYLNEYYNDGTFIKINTRPVVF LDREALEEKYSIRVDKNLLTSFDELRTIIQGQNTADFEKLIGQKGSLRDVVDKCKASISY PPHGLPTLLYGPTGTGKSSIAAMMYEYGINHKILKDNAAFLHVNCSEYANNPELITANLF GYKKGAFTGAESDNVGMIKAAEGGVLFLDEVHCLRPECQEKLFLFMDNGNYRMLGDNEHQ YHSTVLLVFATTEDPETVLLKTLLRRIPVRIEIPSLEDRGIKEKTSILVEALDIEAKKMR RNITISNTAFNALLNARYTGNVGELFNVVQATCMNSLFHNKKEGVLEIHTLNLPGKIISN HHIDRNSILFDRHQMLSLDQLKQHASDSLPQTTLFATLLGHLRDLQNNRILMPKFIEKCT VDVEHYFNSVLFDNQNIKDPTNTYIMKSLKAIVEMISEKYGYSFQTNEIYSMSLMIRDCM QSYREMEEYFDTFSEECDNFTGIIEKKFMREYAIVSEISEVLKLHLDIELRPFIAAIFTL IMHMYHRSKDINKRIGIILAHGYATASSIANAVNQMLDQYVYDAIDMPLDTTTETIVKKL NDFLRKRGEYRDLVLLVDMGSLKEIHRGVSDISRANVAIASDVSTRMALQIGDALRKDVP LKKIFEAYRETCDMHVEILESKVREKAILCSCATGIGTAEKLKTILEDSLPKNLPVRVLT YDYSTLLENRMEDDFFDRYEVVCIVGTLNPNIDNIKFIPVEELIMNNSFDVLTIHFKDLL NEEAMEQFRRNLLKNFSLSNIIGNLTILNPDKLLRHVADAIDRLQKEMNRMFSYNMCFGL YVHVCCLIERLVTREGAEDYVKSYAECSREMQEFILCIKAAFEKVEKYYSVSIPIEEIEY ISIYIRNMQ >gi|312955264|gb|AENW01000043.1| GENE 106 120145 - 120882 751 245 aa, chain - ## HITS:1 COG:lin0339 KEGG:ns NR:ns ## COG: lin0339 COG3394 # Protein_GI_number: 16799416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 2 245 3 259 261 142 33.0 6e-34 MKMIIRADDFGFSEAVNYGILKAFRGGLVKNIGLMSNMPYAKQAFDMIREENVTLGLHVN LILGSPCARPEQIPSLLNMDGKFLSSRVRRREMEEGIDNFVYEDTVVEVKAQVEQFLSIC GRLPDYIDAHAVYTGTTEKAICDIADAYGIDIKGHIEDTRWQGIQTDYTNTEFYKQKLPF VEFFKSYLNYSDRISLIVFHPGYLDYDVIRTSSLTVNRCLDTALLCDAEVKEYLKQHTLL SFKEL >gi|312955264|gb|AENW01000043.1| GENE 107 121524 - 122729 898 401 aa, chain - ## HITS:1 COG:SP1893 KEGG:ns NR:ns ## COG: SP1893 COG3307 # Protein_GI_number: 15901720 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Streptococcus pneumoniae TIGR4 # 11 384 9 383 397 156 27.0 8e-38 MERISAFLHRKLDNFTLDEYIIMFVVCSIFLPFEFPLLAIAGVLLYLCATGRMKGIIRAV PKSGFMIVFCLLTSAIAFISGNLLGGVCGIGILLLMLFIFYFRTVINKRLFELLMDACCI ISLFCFGWAMMEYCRIIVRLNYSFLQLKVENSPKDRINSTFFNANYYAMMIEFIVLICVY KMMQVKTLRRIVFYVVTIVCNLFALYLSGSRTAWIPFVVTIPFMFLINKRFIYFTTSMAG IGGAGMLLLLEPKLMQRATIFQDFAKRSNIWETAVKGIQAHPLLGKGPLTYFHIYKQYHG HPTQHAHSIYLDPILSHGIIGVILAGIYFAGNLKEVYLLLKRRIDLRLFSLISAFILTIL IHGILDYTVYWVQTGLLFLIVLSASSMYFHKEQPYDIQEEH >gi|312955264|gb|AENW01000043.1| GENE 108 122969 - 124312 1243 447 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399930|ref|ZP_06644076.1| ## NR: gi|293399930|ref|ZP_06644076.1| hypothetical protein HMPREF0863_00213 [Erysipelotrichaceae bacterium 5_2_54FAA] # 12 443 10 432 436 90 31.0 2e-16 MDDKRRTAGNDEDIDLSGMINEYSQDNELRKKIEELKKQKEEEKRIYASKQESSAAGSSI FDSISETGTFKRPEAVKQGGIPDIRVDDTQLDQTRVGFDDDPAYDKTLVIMNNRNKASSA DQTQIFGEDRTAVFHTMDAQEYDDSDVEEEYAEEEIYEEDDDDNLLARIKEKKQRKEEAK RKLEQDDDEEEDEDDPGKSAKMNKIITYVIIGIVGICIIAGAFFGVKYALSNFLGGSDDK EKTTDKSGTGSKDKEQNEGNKQTNTNPGDDEDEEKKNEIKTNQAEAAQLQKQLDQYESQL KDVEKDLAAAKKDKEAAQSELDSYKELFNNAVLLKNQAEELYTLLTPVNEQNTYRNSDNP EEKAKFDVAIYETALKAYNDACAKYSVSSYNELYTKSQQANNDYNTKAQAAEQKKSAAES SISSLESRKTDLESKIADTTTKLNAYN >gi|312955264|gb|AENW01000043.1| GENE 109 124668 - 124952 398 94 aa, chain - ## HITS:1 COG:no KEGG:Elen_2980 NR:ns ## KEGG: Elen_2980 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 4 94 19 115 129 84 42.0 2e-15 MEYQIMVDGIEIQSNEQVNEKEARAYISYIRKNNPKKEISSVELSFDGEEVGLGYHLQPE GFEKIRRITGYLVGTVDRFNNGKRAEEHDRVKHA >gi|312955264|gb|AENW01000043.1| GENE 110 124986 - 125423 162 145 aa, chain - ## HITS:1 COG:no KEGG:Cbei_1498 NR:ns ## KEGG: Cbei_1498 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 9 132 12 136 138 103 40.0 2e-21 MKTSVFRTELPYSTESVWAVMTDTTQYAWRSDLKCIETDSDMVFREIYPNGNETVFTITE KKPFTRYAFHMENKRFSGEWTGTLEELAHGGCRLILEERIEIHNPLMRLVAGMAWNLNKL QQTYVQDLKKELVRRNNCKEASASL >gi|312955264|gb|AENW01000043.1| GENE 111 125420 - 126067 914 215 aa, chain - ## HITS:1 COG:BS_sipS KEGG:ns NR:ns ## COG: BS_sipS COG0681 # Protein_GI_number: 16079388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 27 207 2 181 184 116 39.0 3e-26 MDQKENKEEQFQAVIDGTENIKPKKKKEEKKGLKYELLDLVKTFVICFVCIFLLTNFVVK PVRVDGRSMDPTLEDGEIGLMNVFSAKFQDIERFDVVVVYNEEKKENWVKRVIGLPGDTI YAKDDVVYVNGMPIEEPYLDNAYANQIRRHGNNFTEDFPKRTLKDNEYFLMGDNRIVSYD SRRVGPFKREDIRGKDVYVLFPFNKIKMVRNGGAE >gi|312955264|gb|AENW01000043.1| GENE 112 126278 - 127378 1030 366 aa, chain + ## HITS:1 COG:MA1274_1 KEGG:ns NR:ns ## COG: MA1274_1 COG2202 # Protein_GI_number: 20090138 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Methanosarcina acetivorans str.C2A # 102 300 291 489 1119 64 25.0 3e-10 MYTALLKLGKEAAPMPDQNQFWESLDKYRYILDSLPNPVIVTDMDKIVRYINVAARAIVP PPYEKLLNQPCSNFHTPYCHTKDCCIQRFLRNEKGAIQSGPGDIINRVDISYLRDALGNP IGYINVSTDVRELMEVQRQLKISQERYEIALQQARTALWEYDIREHTIQRIDNVRGQFSE IFPNEGVIEGVPDALIAQGILFEDSIREIEVMYSKLKEGYKKVSGQLHMRNRNGEERWVE IRCTTIFDEAGRAIKAIGISKDISEQKRLESSYQNERKLQEIMNAGFLSVFEVNVTQNRM ILIDKEAAAKLSSPPEEGVYDEILQAALSKIHPDFQKKVYEKMNCRALHLAYMRGIHTCN VEYRLK >gi|312955264|gb|AENW01000043.1| GENE 113 127418 - 128935 736 505 aa, chain + ## HITS:1 COG:VC0658_2 KEGG:ns NR:ns ## COG: VC0658_2 COG2199 # Protein_GI_number: 15640678 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Vibrio cholerae # 1 191 28 219 219 106 31.0 1e-22 MKKDSSADIFARVFLKDIQAQKEKEEKLQKEVHIDALTGAYNRKGIITHIEELLRQNPEA ISACVSLDIDNFKEVNDTFGHLYGDAVLSETAKKIQKLCRNDTLIGRLGGDEFVAFFPRL QSEEVLMHAAERLQTALVNTYTSGSHMVKTSVSMGISFYPRHGTTFTELYDKADIAMYHC KRNGKNGWTVYQDTMERCQQIMEKPDSDNIGDMQLNKPFEGNIGEYIFRILYRREKTDPQ TMRTVLELIAHHYDMQYFYVMDFNRETQSIQPLLSWSEEDKSLYELLQLDEQKAALEFLE TIHSDNDRILFLENCGKDCFDRFPKEILNKLAIFALVHMSVPVSNQHDILIGLANTRHTH SFSRNQRTDIRTIFEVIVTFLKDQQQREQQKKYTDTLISLLNNLGNSIYVIDPHSYQLIY FNQSLMEIFPKLKTGEICHKVFREEDTPCKDCPIRQLSKTVPSASTDIHNAKLNADIQTT AAYVEWYDQQKYVLLSGVDVTRYKK >gi|312955264|gb|AENW01000043.1| GENE 114 129647 - 131017 628 456 aa, chain - ## HITS:1 COG:CAC0847 KEGG:ns NR:ns ## COG: CAC0847 COG0534 # Protein_GI_number: 15894134 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 5 447 11 455 459 161 27.0 3e-39 MKHIRFMRYFISLALPVILQQLLAHLLAMSDTIMLGAFSEQAISAVSVANKYFFIYNLVI FGLTNGLGLFISQYHGAVQKENENRTLRFGLRLCIYTACGFMFILLISPSAVMSVFVKNQ NLISLGNTYNRIVLFSFIPYAVAQMLGVGYRVIAHTRIPMYAGTLSFVLNVVLNYGLIFG RLGLPAMGIAGAAWATLLARLTEAVSLTLVSMHKKSEFYFFQRYGGFDVRHKLVILKKTI PLVCNEFIWSLGLSLIFINYCFVSEQYIPALTVVDNISSMIYVAFSGCSTVTGVIIGNDL GADKLDQAMRDAKQMIKIGLMIYVIGCILILLTSPITPRLFSLKGESLQMAIWLLIIKSC ITWTQGYSETIYYILRAGGDTRSVLYIDGLFTCFGPLLLSTIFARLFPLPILFLFAVVEG CSIFKIIIATWFYRKKTWLKNLTEEKSNYNEYTKYS >gi|312955264|gb|AENW01000043.1| GENE 115 131117 - 131779 588 220 aa, chain - ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 1 217 1 217 220 128 39.0 1e-29 MRISKYIDYIDDPEDTFLQYINKGKFYDFRCVFADLETYAVAVEYLKDTSVIIAGAIDFP EGKLSLDEKMKMFKTYAEKGFREIDYVLNQKAVKQKDYLYIEKEMSCIADFCRTHGILDK AIVEMCKLDNDEAAKREICRIANKAKPAFLKTSTGKSYAGAKLEDVKLMKSILHDDIKIK AAGGIHNYQEAMAFIKAGASVLGASAGIAIVKGETQNVIE >gi|312955264|gb|AENW01000043.1| GENE 116 131838 - 132677 850 279 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 28 278 31 278 278 221 45.0 1e-57 MTTSNKEDRLITKKDLLHSACNIGALGMEYSWNYPRQMHLAFCLMINPMLKKVYKDDPEG YAEALTRHVAFFNITPQLAPFVGGIAISMEERVAKGELEGAAVDSVKAALMGPLSGIGDS IFLGCIRVIAVAVGISLSASGNIMGPIAYFLIYNIPAFLVRFIGAVKGYELGFSFLANAE KSGLMEKVMFASGIVGIMVIGAMSKDMFYATIPLEIGASVSGEEVQTVQGILDGIMPGVL GLSATWIYYWLLKKKVNPMWLIFGTMILGIVGVYLGFLG >gi|312955264|gb|AENW01000043.1| GENE 117 132664 - 133437 829 257 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 2 257 1 259 259 168 43.0 1e-41 MIVQAILVGLIAAWGSLDYAFGTLYTFRPIVLGPLVGLALGDVKTGVEIGASLELLFMGA ISVGAYIPPDVNIGGVLATAFAISMGKGVDAAVALAMPIAVISLGIGNLVSAITPVCLKI ADDGAAQGNDSKIMFTQWLMGAFATSYKFLLAFGAFYIGADKVQDLLDFIPQFILDGMGV AAGILPAMGFAMLMRMIINKKLIPFFFLGFVLASYANIPVLGVAIIAVIIAVEKFGFLEG KPQLAGNAEEVDDDDDF >gi|312955264|gb|AENW01000043.1| GENE 118 133453 - 133926 474 157 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 149 1 149 153 162 59.0 3e-40 MIKLVRVDHRLLHGQVAFSWTNGVGANCILVASDTVVNDDVWKTTLKLGKPSGVKLVIKN MADSIAAINSGVTDKYKLIIVVQTIKEAKQLADGCPCITSINLGNTKESKTTTQISKQVF LEDEEKAILKELMNRGVECEIRALVDDSKINVAHALK >gi|312955264|gb|AENW01000043.1| GENE 119 133941 - 134357 285 138 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 2 131 3 132 140 102 37.0 2e-22 MRHYVIASHGGFSKGIYESIKIIIGEQAGVDIITAFIDGKNDIEALVNGTLEKIPYSDEI IVCTDVFGGSVNTEFMKQLKTRKNLYLITGMNLPLLMQLFLSAEENTERMILDIVNSEDT HVKYCNSMIETQDVEDDF >gi|312955264|gb|AENW01000043.1| GENE 120 134354 - 135199 611 281 aa, chain - ## HITS:1 COG:ECs4223 KEGG:ns NR:ns ## COG: ECs4223 COG1082 # Protein_GI_number: 15833477 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli O157:H7 # 5 278 1 273 275 113 29.0 3e-25 MNREIKLSAMNCHHRFYTLESFFANAKANGYSCVELWTGPQHFYMDYHGYETIAKLKDLE HQYGIKIIGICPEQTNPKPNNMAVRDSDMQLQVEHYFKNAIDAAVEIKANQVVVTSGWAF LNEPREDAYQRSVKMLKKISEYAEQKGMLLAVEALQRNESVLVNSVEELQHLLKEVQRDA LKVCLDTGAMAMAGNTIQQYFDVFHDDIIHAHFVDVKADTTHLAWGDGERNMKEDLQVFI QNEYHGVLSVECVNSQYFENPSVADEQSIQQYQKYMKELYV >gi|312955264|gb|AENW01000043.1| GENE 121 135196 - 135846 301 216 aa, chain - ## HITS:1 COG:CAC0632 KEGG:ns NR:ns ## COG: CAC0632 COG0637 # Protein_GI_number: 15893920 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 204 2 209 215 114 34.0 1e-25 MDAVIFDMDGVLIDSEPIYMHHVLEFYRRFDIHVPYKEVVKLAGSSHEAGLEMMSAWWKE DITPSEFEKFYEANSDEEIVYSEILNPYVLYVLKRLKARGMKLAIASSSPKQAIVTMVNE CGLKGYFNEIISGHDFPYSKPDPSIYLYTLQKLNVAKERCIVIEDSTYGILAAKAAGIRV IAKHDVRFGFDQSLADYLVYDLLEAYHLIMQEGEAA >gi|312955264|gb|AENW01000043.1| GENE 122 135850 - 136881 868 343 aa, chain - ## HITS:1 COG:STM4540 KEGG:ns NR:ns ## COG: STM4540 COG2222 # Protein_GI_number: 16767784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Salmonella typhimurium LT2 # 1 343 1 343 343 305 45.0 7e-83 MEKEKVVLPKFNVETYLKDGDAVIDKLKDVEAAANKIHDKGYENIFLLGMGGTYDELEPI QYIMNKYSEVEVHLSNAAELNVLGNKRLNKKSIVITASASGDTKEIVEAVEWIVKEGIDV MAFTKPETPLGKLATMIVTAPVTTGQCEYSYLMFDVLALRLLNRRGEFPKYDDFVAQTKN IFHDLVGIREKFDERADEIAKQYALAPYSIFVGSGALWGETVLFSMCILEEMQWVRTRAV SSPDFFHGTLELVEKDVPVFLFKGEDECRKLDNRVEAFAKRFTDNLVVVDTAEYAIDGLD PEFRFIVSPMILTALVTERLASYYETYTKHNLAYRRYYRQFEY >gi|312955264|gb|AENW01000043.1| GENE 123 137399 - 138130 420 243 aa, chain - ## HITS:1 COG:BH3323 KEGG:ns NR:ns ## COG: BH3323 COG2188 # Protein_GI_number: 15615885 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 234 5 228 237 106 29.0 5e-23 MDYRMPLYMQLKEIIIKRIEDGEYLPGEKIPSEREMADTYGVNRMTVKNAISSLVEANIL YRVHGKGTFVAKKETEKVAFYENYTDTGRGLGAVLKDSGKPLTNQTLEKGVIQCRGYLAN KLHILKNDDVYVLHRLRSMGTESFALEYCYVPFRLFEDIDSYNFEHVSLYDYMKSKGHLP VVFSQRLTILKAVQPEARLMKIQEGQPLYYFEYIGKDAKGNVVEYTESYVRCDKAKFTFR AKR >gi|312955264|gb|AENW01000043.1| GENE 124 138141 - 138842 492 233 aa, chain - ## HITS:1 COG:CAC0189 KEGG:ns NR:ns ## COG: CAC0189 COG2188 # Protein_GI_number: 15893482 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 14 231 20 238 243 110 33.0 3e-24 MKILTLSIMIANELKNMIEQENLKEGDKLPSERELCEKLNVQRLTLRSGLRILMQEGIII SKQRSGYYVNKPRIVKNVFHLESTSEAIFEQGLNMKIKILNIEKKETNKQLSTKLRLPLG TKVYCLQRLRIIDDEPVSVDTSYLPIKYAQGLEKKDFESRALYQILESEYDISINRSEQE ILICEADNYIANALHVELGTQMVLQQGLAYDNDNRQIEYSESIMKMERFVYVN >gi|312955264|gb|AENW01000043.1| GENE 125 139374 - 139763 125 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160931939|ref|ZP_02079331.1| ## NR: gi|160931939|ref|ZP_02079331.1| hypothetical protein CLOLEP_00772 [Clostridium leptum DSM 753] # 4 121 62 179 261 98 43.0 1e-19 MNGYTGDLRTLFEIENQVHCYNYLKLLIVEKKALDINFIKRMQYKLMKGTYDDIRYHDKQ ERSGEFKIHDYVTGKNEIGRYPHEVESDVKELLSELNTYQGTDYFTAGVYLHAIFEHIIP LRMAEQAGH >gi|312955264|gb|AENW01000043.1| GENE 126 140075 - 140587 558 170 aa, chain - ## HITS:1 COG:PM0869 KEGG:ns NR:ns ## COG: PM0869 COG0440 # Protein_GI_number: 15602734 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Pasteurella multocida # 8 162 2 155 163 105 38.0 3e-23 MNGNGMKKRWISLYVENQVGVLSKISGLFSGKSYNLDSLTVGTTEDPTISRMTIATVSDD ETFEQIKKQLNRLVEVIKVIDFTDIFVRMKEILYVKVQNCTLQEKTELFQIAQTFKAKVI DYGRDSLLLEFVQTATKNDAVIKLMKEEFRDIEVVRGGSVGIESISMMER >gi|312955264|gb|AENW01000043.1| GENE 127 140622 - 142343 1900 573 aa, chain - ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 572 7 560 564 577 50.0 1e-164 MKKISGNKLLVKALQEEGVDTLFAYPGACTIDISDELYKQNSIKIILPRQEIALVHEADA YARSTGKTGVCLVTSGPGATNLVTGLATAYYDSVPLVCFTGQVARNLIGNDAFQEVDIVG ITRSITKYGVTVRRREDLGRIIKEAFYIAASGRPGPVLIDLPKDVMGELGEADYPDKVNI RGYKPNTAVHIGQLKRAIKMLGKAKRPLFLAGGGVNIAHANEDFTKLVNKTNIPVITTIM GKGAIPSNHPLYVGNIGMHGAYACNMAVNECDLLFSIGTRFNDRITGKLHSFAPNAKIVH IDIDTAAISKNIQVDIPIVADAREAINKMLEYVHEYNTKKWLDEIDAWKSEHPLMMKKKP YLTPQDIIETINRVFEELIVVTDVGQHQMFTAQFIELTNKKKLLMSGGLGTMGYGLPGAI GAKIGNPDTPVLSISGDGGMQMNIQEIATAVLEELPIINCIFNNNNLGMVRQWQKLFYGK RYAMTCLRAGAACRNKCGEVSCPTYTPDFVKLAESYGAKGIRVTEKEQIEPALREAMSSK KTPVIIEFIINPEDLVYPMIQPNGTLKDMLMDC >gi|312955264|gb|AENW01000043.1| GENE 128 142634 - 143503 981 289 aa, chain - ## HITS:1 COG:PA3657 KEGG:ns NR:ns ## COG: PA3657 COG0024 # Protein_GI_number: 15598853 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Pseudomonas aeruginosa # 44 288 5 248 261 259 51.0 5e-69 MEMHRNTRCWCGSGKKYKQCHEKFDEKLAKLAREGHIVPDRSLIKNKEDIIGIKKSGNIN TGVLDHVAKHIRPGMSTGEIDRLVYDYTVSHGAIPAPLNYEGFPKSCCTSVNDEVCHGIP DDSIILQEGDIVNVDVSTIFHGYYSDASRMFMIGEVSEEARNLVEVTKECLNIGMDAVKP WGHVGDIGAAIHKYATSRGYSVVVDFAGHGVGKEFHEDPVIGHVGRAGSGMVLAPGMVFT IEPMINVGDYHLYIDEDNGWTSYTEDGSLSAQWEHTLLVTEHGIEILTY >gi|312955264|gb|AENW01000043.1| GENE 129 143716 - 145395 940 559 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2076 NR:ns ## KEGG: CLL_A2076 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 543 3 555 558 398 42.0 1e-109 MKRLPIGIEDFKELIDKDCYYVDKTSFITDIINEKVALYTRPRRFGKTLNMSMLYYFFSM KQKDNAYLFNDMDIVNHTDSLQYQNQYPVIFITLKDMKKHTFENQKAMFAILIQDIVRKN QELLESEELNTFDKEQLIAYYRRSQSDVDLQNALKFLCGCLKQHYHKDVILLIDEYDVPL QSAYLKGYYDEMADFLSGMFSAALKTNDALEKGILTGCLRIAKESIFTGLNNFSVYSISE DQSSTSFGFTPKETITLLEHYDLKSYEQTIKEWYDGYLFGNKEIYNPWSVLKYVQKIKQG NDTPESFWANTSGNDIIYQYIQKANSHMREDFDLLTSGKMIEKAIKHELTYREMDKIQNI YSFLLFTGYLKVIKCIDEEKSIYQLMIPNKEINRIYTLIFEEWFQEQTEAHAENFAEALL KEDIETANKIVNDLLFTSISYFDYDEKFYHGILIGLLCNYRIMSNQESGLGRFDIAVAPR SLSDRGMILELKTATSLAELKNTAKHACKQIKDKQYIEGMLAEGYEDIIGYGIAFYKKFC VIEALKDSTDTIVNDTSIQ >gi|312955264|gb|AENW01000043.1| GENE 130 145442 - 146329 949 295 aa, chain - ## HITS:1 COG:no KEGG:BL0781 NR:ns ## KEGG: BL0781 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 4 286 20 303 318 348 61.0 2e-94 MSKKYQTMKKAIKMEIKEHRKSFLVYLTLRALVILVMILQIFNRNFENVFLCLLTLILLI VPSFLQVELKIELPTALEIIILLFIFSAEILGEIQSFYILIPMWDTILHTLNGFLAAAIG FSLVDLLNNDDRLQFRLSPVFMALVAFCFSMTIGVVWEFFEFGMDTFMGTDMQKDTIVQS ITTVMLDPTNSNIPITIDGIHSVAVNGKELGFNGYLDIGLIDTMEDLLVNFIGASTFSIL GYFYVKKRGKGAFTRQFLPRRKTRDADFKRLARKELEQEEHEKLKDAGKEASRNY >gi|312955264|gb|AENW01000043.1| GENE 131 146812 - 147699 1054 295 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 241 1 246 299 185 40.0 1e-46 MLVSMAEILQRAKEGHYGVPALSAVDELSLRACVEAAEEMNAPLIMLCGWGHNKDMQYFG RMLHDFAIKASVPVAFILDHSATFEDAVKGIHAGFHTIMVDRSSLPYEENVAQVKELVKI AHAAGVGVEAELGHVGVGENYAVDGIAALTQPDEAVRYVKETGVDCLAVAIGSAHGVYKG EPKLRLDLLKELAEKVPVPLVLHGGSGTGDENLATACRLGISKVNVANDLFRGAYNKIQE VGMEGNNIYALMPMLQEGYKETAKHFIKILGCADKAWKAEQCVSSGLKQDLNEAK >gi|312955264|gb|AENW01000043.1| GENE 132 147718 - 148761 893 347 aa, chain - ## HITS:1 COG:SMc01214 KEGG:ns NR:ns ## COG: SMc01214 COG1063 # Protein_GI_number: 15965330 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 5 320 1 312 347 134 29.0 3e-31 MNKKMKVVAITNDHKVEVKEVRRPDVKPGKILMHIKACALCTWEQRVFTRESKMPLPFVG GHEIVGSVAAVGEGVSEREFPIGRKLTARLIQVCGKCYFCRHGEENLCVDINAPFDKEME IPGTGGLGEYLNIDPSQAYLLPESLSDTAAVFSEPLACVLNSIERGQIALGDDVAVLGGG IMGMLHVLCAKLSGARVIMSEPDAKRRALAKTLGCDDTINPMETNPVDYIKNLNGIGAEA VFNTTPISAVAKQAVEMTAPLGRCVMYSSQHPDKPIEISPNWLHSSETVITGAVSPSVRS FQRAVNMLSKGLIDPEKLVSGVYPCNQAQEAFEAAIRPDTFRIIITF >gi|312955264|gb|AENW01000043.1| GENE 133 148754 - 149914 1046 386 aa, chain - ## HITS:1 COG:VC2033_2 KEGG:ns NR:ns ## COG: VC2033_2 COG1454 # Protein_GI_number: 15642035 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Vibrio cholerae # 37 379 50 413 443 174 33.0 2e-43 MQIKQYQTTKYIMGNGALREVQRWKDKKIGLVVDENVLKALQLETKLFDELLKDCDYEVL CNMPQEPTTELLEPAIRKAQRFDPDVFVAIGGGSVLDSAKVLWLFTEFPDYTWEQAFAPY AVESFTKEKELIAIPTTSGTGSETTGCAVVKDTEKRKCMVLSNEIMPSTAILDYELLVSL PKHVIAFSGCDALAHALEAGISVLASDMVRMQSVQAAVQIIKQLEASCNGDLNARRDIHL SATIAGACINNSITGMAHGMDQAGGDFRKPHGLMTGLILPYTMCHLLPQPLYEEVADQLG ICGTSMEKQERLIARIWEMYRKIEMPVTLQEAGIDRKAYMCKIDTYVKQAMQDANVQCAP KTFSAAELKAMYQELYDGKEWRTAYE >gi|312955264|gb|AENW01000043.1| GENE 134 149926 - 150762 786 278 aa, chain - ## HITS:1 COG:YPO1756 KEGG:ns NR:ns ## COG: YPO1756 COG3716 # Protein_GI_number: 16122012 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Yersinia pestis # 28 277 41 294 295 180 36.0 2e-45 MSETVDKKNLLTSKEVNRAWLLWLFNNQACYNYERMMGIGFLHAMTPAFRKLYKDNKDLR IEAMQRHTSFFNCEPCLGSSIVGLVMAMEEQKALGAELDNDAITSIKTGLMGPLSGIGDT LIQGVILPLLIAFAVDFAKGGNWVIPLVFSLVMAIIVFGISRFGFLLGYRKGSDAILSML ENGVIKRLISAASIMGCMVLGALVVNFVTMKCGISIPQAEGSFSMQEQLFDAILPSMLPL LLTLGCYKLLKAGKSSVLVMLVIIAIGVIGGLTGILSV >gi|312955264|gb|AENW01000043.1| GENE 135 150759 - 151514 748 251 aa, chain - ## HITS:1 COG:STM0575 KEGG:ns NR:ns ## COG: STM0575 COG3715 # Protein_GI_number: 16763952 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 3 241 2 238 247 107 32.0 2e-23 MSILQAVLLGIIYYLGNSSIIAGPVGYYSVYRPLVSGCLTGMILGDPAQGTMIGATINLM YVGFISAGGALPGDMCLAGILGAALGITGGLDTEAALAIAVPIGLIGTLLWFGRLTLDSV FAHMADHLAEKGEAGKVWIPSVLLPQLMLFVLTFVPCMLACYFGASYIQGIIDALGGTVL NILMIIGGMMPALGIGLTLMYIFKGEAKIFFFIGFLISVYSGLSMIAIGFISLCIAIVYT QKKESTGGNAA >gi|312955264|gb|AENW01000043.1| GENE 136 151530 - 152012 493 160 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 151 1 151 161 101 30.0 5e-22 MKHIVLCRIDDRLIHGQVVTAWVKQTEGNRIVIIDEALVKDVFLQKIIKAAVPSDIRIDI YNIENGVCELKKEAEDKERIIILVKTPQVVEALIDEGILLDKVILGGMGAKSGRRKFNRN VSASEEEIECMQRIMNKHIPMYYQLVPNESPSDVGKMISG >gi|312955264|gb|AENW01000043.1| GENE 137 152015 - 152416 432 133 aa, chain - ## HITS:1 COG:BS_levD KEGG:ns NR:ns ## COG: BS_levD COG2893 # Protein_GI_number: 16079761 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Bacillus subtilis # 1 132 1 133 146 77 33.0 4e-15 MIDIIIVTHGEYGKAMLASSELIMGEQENVQAFGFYLGESVEHLRDSILQAISCTRKGSE ILILTDMRSGSPFNVTASLMKDHTFEHLTGINLPILLEILCSRTQMELKMMIAHIMSEGM KTLIHVNEMLKED >gi|312955264|gb|AENW01000043.1| GENE 138 152692 - 155127 1252 811 aa, chain + ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 29 390 29 388 464 132 29.0 3e-30 MSKRKELILKAIYAHTLECLEDKQYDKLGMDASSLAMDLRLDRSNVSRDLNLLHQEGRLI KLNGRPTLYVSRQLLMKYFPEQNIPAVLSKDQQLTDFLTKQQRQNEQTQMKESLDTLIGK NIGESMYEPIQKAKAAMNYPYSGLNTIIEGQEGTNRKSFAQLMFLYGKQNGRFSSFHSPI IADCSLLKNYSVHDLDLYVFGEIIDSRLRRGLVEKARQGMLILLHFEQLPDLIKIKICNA ITEAQYHPLNAVNRRFTFQCQVIITTSSPELKEESMIRRCFPTLISLPSLQQRTLEETVM LVLKQFQEEAYFIKRAIRISKGILSCFAMSSYKGNLPHLKAEIRSSCANAYTRLIKENPL CITLDFADISNTVLSDIYDVNERYQQLNTILALFTHNDFYFSTMKENEELQMLYHINEEL NQKKNISINNAKGEIVNQCLNDMNAFMNVHLNTIRSVLLKDIYDLLYPVLQDKPISRNEN ILYGMLSKLSEFISAFKEDTVPAITDVGAISIARKKDYLLFDEIQEAVSSRFNYTFTKWE RDYIATYVYLSSQWLQETQVQLLIVTENGRSKEYARYLHSHDYGNQILSLELDTQVSHDA LLSILTKHVQESDKGKGVLIITDSKDIKLLEKELQTLSNCHVRIVPDLDLPLLLTLLKRA SSIGATFETILQKDAENPIAETEAKDSDSYAMQLIQQMDETILSDSLVFLNPRKSSQILY KTLNAIIKQLQLPYSDNLLIKFIFHCSFTLERCIKNEPLSFPKMKAFINRNNYVYNIIER NFHEVQEVFDCTIPPSEFSFITEIFLPLTKE >gi|312955264|gb|AENW01000043.1| GENE 139 155429 - 156748 577 439 aa, chain + ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 429 23 451 470 229 34.0 9e-60 MKRKIEQQLLKWKQMPNKKPLLIKGARQVGKTYSIRAFGKENYKYMVEINFERDISYIEL FNKTHNPIELLDYLKISFMDIPFLKDTLLFLDEIQACPDAITALKFMSEVFSCDIICSGS MLGIAIAKTTSFPVGYVETWDMYPMSFLEFLEAVSINKDILNRINQSLERLEAVPEILHD KMNELFTKYMIIGGMPEVVATYAETKSIKECLMIQRRIVNDYLNDMAKYAISGDKIKARE CFQSIPVQLAKENKKFQYSVVKKGYNARYYDSSLQWLEDSGLILKVNRLAHIAEPLVSEV ELSVFKVYMADCGLFISQFDDGDIQKIIRGDLSIYKGAIYENIAAQICKRANKACFYYEP SQSTEIDFIIKYEGEITPLEVKAGTHTTSRAFQNFVKKYRVKNAFLFSKKNTGVSIDGVI KHLPLYMLEIILEQEPDIF >gi|312955264|gb|AENW01000043.1| GENE 140 156895 - 158565 1945 556 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 3 556 2 556 556 684 61.0 0 MFKTDLEIAQECKMEHIRDIAAKIGVGEEDLEYYGNYKAKVSLDLLHRNEGKEDGKLILV TAINPTKAGEGKSTTTVGLGDALNRLGKKTMIALREPSLGPVFGLKGGAAGGGYAQVVPM EDINLHFTGDMHAITTANNLISACLDNHIHQGNELDIDIENITWKRCLDMNDRTLRHITI GQGPKANGVERVDGFNITVASEVMAVLCLSTSLMDLKERLGNMLVAFNSKKEPIYVKDLG IEGALAMVMKDAIKPNMVQTLEHNPVLIHGGPFANIAHGCNSILATRTCLKLADYTVTEA GFGADLGAEKFLDIKCRFGGLKPNAVVIVATIRALKQHGNVAYEDLKDENVEAMLTGCEN LAKHIDTVKQFGLPYIVAINEFASDTPAEVEALQNWCKEHQHPMSLSQVWAKGGEGALDL ANQLVELCAEENSYAPLYDVEQSIEEKITAIATRVYGAEEVAFTEEAKEQIALYTSLGWD KMPICMAKTQMSLSDDAKVYGAPKNFTITVRELRPSLGAGFLVALTGKILTMPGLPKMPA ANNMDIDEKGHIEGLF >gi|312955264|gb|AENW01000043.1| GENE 141 158617 - 159849 1515 410 aa, chain - ## HITS:1 COG:BH0634 KEGG:ns NR:ns ## COG: BH0634 COG0151 # Protein_GI_number: 15613197 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Bacillus halodurans # 1 408 1 415 428 422 52.0 1e-118 MKVLVIGKGGREHALVHAVSRSGRVKKIYAAPGNPGMAELAECVNIADSDVKGLTAFAKE QEIDLTIVGPEATLSLGIVDAFQAEGLKIFGPTKDAAQVESSKDFAKKIMAKYGIPTASY QTFDNKADAIGYVEHQGVPIVIKEDGLKAGKGVTVAYELKEALDAIEIAFSVPGNRVVIE ECLEGFEFSLICFVCDDLVLPMEVAQDHKAAYDGDKGPNTGGMGVYSPVKKITPDIIEET MNAVMMPMAKAMVKEGHPFTGFLYGGLMLTKHGVKTIEFNARFGDPEAEVILPRLKTDFC DVIENIMNHSKTELEWDDRVTLGVVMASEGYPASSTKGAVIENLENVNSMVFHMGTAEKE GSLVTDGGRVLCVCAAADTLEEAYEKAYADVHRIHCDKLFYRNDIGKKDM >gi|312955264|gb|AENW01000043.1| GENE 142 160068 - 160778 501 236 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVNKKILLLLPLLVVVFLLLWYAFQPAASTAEFLHNSVEYSKTSLYEVESIMLEEGKPS RNTVTEPQLIDFDMKQPMDPAVWFCEAAPLTVYVPMKQGSRVRFQTLQYTENGEERTADL GRYDIRYVKGKALQESEFFGNTEEQVINIRIRKNAYGRLKTVEPVNRDLKVKAAEISEDE KSYRIRIPYQDFSAYDYIYTNLKYTFEKDGRKEIYYGEQVLAIHKEFGIDYHVIID >gi|312955264|gb|AENW01000043.1| GENE 143 160765 - 161478 309 237 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399801|ref|ZP_06643947.1| ## NR: gi|293399801|ref|ZP_06643947.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 18 235 20 238 238 76 26.0 2e-12 MDTIAQKATASLTQWPWVLILLVLGGALLYIAYRYHYDKNLNAALLDKAVRKLPSPKTVL FAYAILAAACSLLVFAWNTQPGDMKQRSCFTTESYLDLNADEQTITEELKHMEELKSRES VSYHEQELKHGIRMQYAIKNKKDYVYIISYERAATDLKEYYYIELQDIFGGTYATNMIMN PKDKKLYVMVRGTMQESCDASELKLELRNITEEENKNPIHEEIRFTVENGGIQNESK >gi|312955264|gb|AENW01000043.1| GENE 144 161490 - 162233 590 247 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLTGIAGLLILCCIGGCAPVQKEATFLKSSIRFHFPGEDMEESLIVRFKKEGGEGVRV TGIADYKADAVVDPRYVIDEEAPMEDEDFYAYGIQLPMFKDMKVSFSKITYQKDQEEKTA DIGIYEIEKSGEVFEEASISKNWDSEEKELYIDVNTKAAGRLIHVEAVNPDAPIKIVIQR NTYGDFDTDTRVILRYELPKEYDMTATNFCYTFEKSGRRIQRYGRGVVELYKSGNQTAGR GFQRLAV >gi|312955264|gb|AENW01000043.1| GENE 145 162230 - 162925 555 231 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399801|ref|ZP_06643947.1| ## NR: gi|293399801|ref|ZP_06643947.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 229 5 235 238 95 27.0 3e-18 MLQTLFDSQSSTGLLLLILLLLLAGLVVYVLYKHYYELRVNQHLKTPEKQIHLLTVRTVV CIWGILSILTLSWYMGYYYLREAEQSETTCDMYDTVQYAGVDEAMVKERLEAVKKGSKSL SMQKEKPNKHVTVTYAVNDRKEYVYVVTYDLLREPQKDEQIIIRNRTDSGWTSGEIKADS RKIISMTTGTIKDSCAAQKRSIHIYNYTRGKNKNRVDYYDSYTIEKGGIHR >gi|312955264|gb|AENW01000043.1| GENE 146 162938 - 163384 412 148 aa, chain - ## HITS:1 COG:SA0251 KEGG:ns NR:ns ## COG: SA0251 COG3279 # Protein_GI_number: 15925964 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Staphylococcus aureus N315 # 37 148 135 245 246 57 30.0 1e-08 MKLKLLCRKEMKEQLLDDLQKGQVTVCEDADYVLYEANYDYRYLLVRDHEEYMRLAVEDI IYIESISQEIWIHTMDGRYRVKETMYQLEANLYEKGFLRVHKAFIVNKKDIRRIRSSLNS KFTLILTNEDQIEVSRSYYYRFKEEMGF >gi|312955264|gb|AENW01000043.1| GENE 147 163558 - 163767 172 69 aa, chain + ## HITS:1 COG:AF1627 KEGG:ns NR:ns ## COG: AF1627 COG1476 # Protein_GI_number: 11499219 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Archaeoglobus fulgidus # 1 64 1 64 71 70 56.0 5e-13 MRNRIRKLRQELQMTQEELAQRCRVSRQTIISLEKGKYDPSIHLAHRIATIFQHHIEDVF LFTEGADES >gi|312955264|gb|AENW01000043.1| GENE 148 163788 - 164180 316 130 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKCITILLFIILSVMLIVVGFSQEYRSSSLFSGGVGGLIVSLYMLKAIWSAKASQRKREQ LIIDETDERNLLIQKNSRAQAFNVSLITTLAASVLASLYHEEAINSCFNILLGIQLFAYL LIWMYYKRRL >gi|312955264|gb|AENW01000043.1| GENE 149 164404 - 165510 646 368 aa, chain + ## HITS:1 COG:no KEGG:HCH_00659 NR:ns ## KEGG: HCH_00659 # Name: not_defined # Def: alpha/beta fold family hydrolase # Organism: H.chejuensis # Pathway: not_defined # 156 366 31 237 237 113 31.0 2e-23 MQLVWILLIAAAITVIEILIYHYRLPRFFLFIFPLINICLEICIVFYILRQQALVTSYYP LWIRIGIYLLPLLLSLFIMTGFLVRRYVKLEYTKPFRHIVCRLFAFLLISMLFIFLTTIY FAQEYVIFYPNASPQDRDMLMADKAYERISIDSQYTGWLRKAENADSIIVYFGGNAQNTS ALCREYDESGIFSYMKNSHFLSIDYPSYGDSKGSLSQEELFKMADAVLHYARHRYPNKKL YIVGYSIGTGMASYAASKSTPDALILLSPYNNGRDLFNSYFPVFYGPLQHLIRYPLTSDR YVGALTCPALVILSNQDTIVSPSLSRRLIECFTTPVKTIPFDTLDHGDIAMNKEVWKSIM RFLHELSE >gi|312955264|gb|AENW01000043.1| GENE 150 166088 - 166435 398 115 aa, chain - ## HITS:1 COG:lin2908 KEGG:ns NR:ns ## COG: lin2908 COG1447 # Protein_GI_number: 16801967 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 4 103 1 100 102 74 40.0 4e-14 MDTMGSSELEILEIISSVGQARSLYIEAIQEAKSKNYGQCNELVRKGNEQYAKGHRIHQR LVQEEAGGNPVDLNLLLTHAQDLLMSAESFKILCDEFVDLYRKFDELEEKIYEKG >gi|312955264|gb|AENW01000043.1| GENE 151 166744 - 167421 479 225 aa, chain - ## HITS:1 COG:CAC2773 KEGG:ns NR:ns ## COG: CAC2773 COG1309 # Protein_GI_number: 15896028 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 27 214 6 197 204 109 33.0 4e-24 MFTLSTSCDKIQLYRKKGLVCMCEQSYHHKDLKNTLIKEGIHYINVYGERSLSMRKLAAL CHVSHTALYKHFQNKEEFMNAISAYIEEQFTEALQRSYENAGGDVDEAIIQIGAGYVAFM VQHPDFLKYHTNIMKSQMFQLQDLEKKSVKSYEIFRSTALAFLKKHGCPPEEYQKEILTM WSLVMGLSDMLAYKIIDSQKDALKTAEEIIRREIKLRCMKSAYHS >gi|312955264|gb|AENW01000043.1| GENE 152 167478 - 167990 200 170 aa, chain + ## HITS:1 COG:FN1035 KEGG:ns NR:ns ## COG: FN1035 COG0655 # Protein_GI_number: 19704370 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Fusobacterium nucleatum # 28 143 30 146 159 99 36.0 2e-21 MKTILSDIALPQLPFSENVSVFDTHKLKQTAPCTGCFSCWIKSPGACIFQDDIASFTASM KQSDTLYILTENVYGSYSPFVKCAIDRSLSYVQPYFTIRNHEMHHVLTSPTHLQLIVIAY GSENEQEQNVLQALVQANGVNMDCRYVQCHHCADSEKALVRLQTMLEVAV >gi|312955264|gb|AENW01000043.1| GENE 153 167990 - 168613 299 207 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_3070 NR:ns ## KEGG: CDR20291_3070 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 206 1 216 216 134 33.0 2e-30 MKYAILSGSPKPSNSCSEMLAKHLFTDMENITVFHCMDIHKNLDIFHQLQSFDTIVLSFP LYFDALPSHLLSFLLQWEKERKRATVKVNLYVIVNCGFFEGKQNRYALQVVENWCTKSGM CFMGGIGIGAGPMLNEIQAMAWEHGPKAPVDKALRRMREAIITDTAFESSYVQPAFPRSL YIKMAHHSWNKQLKKNGYDPKRVYPKR >gi|312955264|gb|AENW01000043.1| GENE 154 168807 - 170036 1400 409 aa, chain - ## HITS:1 COG:BH3818 KEGG:ns NR:ns ## COG: BH3818 COG1078 # Protein_GI_number: 15616380 # Func_class: R General function prediction only # Function: HD superfamily phosphohydrolases # Organism: Bacillus halodurans # 5 406 10 413 432 334 44.0 2e-91 MLKTEETKVLRDPIHGYIHVDLKVVWDCINAKEMQRLRRIHQLGGDFQVYHTAEHSRFSH SLGVYEIVRRMVYEIDQLREVLSDYEKAVVMLAGLLHDIGHGPFSHAFEGISTYKHEEYT VKIIMENSEIHQILAACDARLPEDVASIIQYRHAKECMNQLVSGQLDADRMDYLLRDAYF TGTSYGKFDLERILRTIRVKNGRIVVKASGIHSVEDYIMARYHMYWQVYLHPVARSYETL LSILFRRMKEVYALHPEYLSDVKMFHPFLCGADAGIDALYRLDESAALYGFSELVTCRDE ILRDISYRLLNRKLFEYVTLKNPEDLERIQLHVQALGYDPDYYVYQDVVSQKPYSPYKSN ESGHNIWVLEESGKVKELSKASDIVRALTRADLKEESKLYFPEEKLHIK >gi|312955264|gb|AENW01000043.1| GENE 155 170196 - 171365 847 389 aa, chain - ## HITS:1 COG:ECs4272 KEGG:ns NR:ns ## COG: ECs4272 COG0226 # Protein_GI_number: 15833526 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 101 386 212 498 505 217 39.0 3e-56 MMWAFFIVLLTLITIVALPIVSMSALMLAWATAHRYMSPIFMFTVIMVFVYLWSMLISKQ RNQCWLKKKTQLVLILPVILGICILGGTFAYDAWQSRFEVMRSEVDLFEYEPFHSDKLAV PDKKSSYSMQEPLLRLDGATALYPVYASFVQAVYPREGYDDSTDSVRCTTTPEAYENLQK GDTDLIFVAAPSDKQRELFEKEGKELIMVPLGMEAFVFFANSENPVESLTSQQIQDIYRG NITNWRDVGGNNERIRAFQRPEGTGSQSALLRFMEGKKLMSPPQKDVASGMGDIVTETAE YENRENAIGYSFRYYTQGMVKNKGIRLLKVDGIEPSVENIRKDTYPISSPFYAVYVKGNT NKNLKPFLSWIQSKEGKELIEKTGYVAGS >gi|312955264|gb|AENW01000043.1| GENE 156 171362 - 171751 311 129 aa, chain - ## HITS:1 COG:YPO2167 KEGG:ns NR:ns ## COG: YPO2167 COG0494 # Protein_GI_number: 16122399 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 5 122 3 121 128 87 38.0 5e-18 MKTKDIVCAVICMDQRLLIAKRSSGVHENIWEFPGGKVESGETREQAVAREIREELELCV DIDRYLTTIRDNREDCTLLVHAYLCRYVSGEIHLHAHHEYALVTPRELYSYQFEAADQPI LDMLQENAL >gi|312955264|gb|AENW01000043.1| GENE 157 171754 - 172512 536 252 aa, chain - ## HITS:1 COG:no KEGG:CLI_0521 NR:ns ## KEGG: CLI_0521 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 59 243 68 252 263 147 34.0 5e-34 MKKKCLVYLIILPLLLPLSAHARAGGGGSGGGGGSSSGGSSSGSTNSDHYYGHGYNDPIG SMFSTIAIGGLLVLIPAMPMLAYRRRVKKKAKQSAALLHWLEDTDAIWNEKLIKQRVEDI YYHVQDAWTNAKVEDLKPYLTEHLYEQWKMRLTWMELRNERNVLDNIKLRRSAVVGIQDY RDDSQDFCWLYIEGSMIDYTINSQTQTITEGKRKTSTFVEYWKLQRIGDTFYLDDVRQKE DVNPEDFTDWRE >gi|312955264|gb|AENW01000043.1| GENE 158 172673 - 173665 1143 330 aa, chain + ## HITS:1 COG:BH2703 KEGG:ns NR:ns ## COG: BH2703 COG0673 # Protein_GI_number: 15615266 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 1 326 1 325 329 369 54.0 1e-102 MNVATIGTGFIVDWFLTAVQESANISCVAMYSRKESSARMLADKYEIDKIYTNLDDMLKD EEINFVYVASPNSLHFEHALKALQAGKNVICEKPFTSTVEEFDRLVKEAQDRHLYLFEAI VTAHMPNYLRMKEELPRLGTIRMVQCNFSQYSSRYDKFLQGETPNVFNPEFSGGALADIN IYNLHYVIGFFGKPKTVHYYANKHANGIDTSGVVLMQYDGFQAVCVGCKDTRSECIAQIQ GEKGFITMRSETSRCAAYTIQIGRERAEHPSIVQNDVALYYELQDFRDIYKLDDYERCTQ LLAYSRTVMEVYEAARRDAGIVFAADRNGL >gi|312955264|gb|AENW01000043.1| GENE 159 173662 - 174027 275 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399810|ref|ZP_06643956.1| ## NR: gi|293399810|ref|ZP_06643956.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 121 1 121 121 112 52.0 7e-24 MSVFENDWIMRQIEGMTDMLGKVLLHREKSEIRVEEELSDEDVKKYHRRIQALLRERKYP EAVQYLREYFATGSMEYLKVALSAFDQLNSLSESELQEGGYTRQELYNDLEFITQQYGIH L >gi|312955264|gb|AENW01000043.1| GENE 160 174310 - 175416 820 368 aa, chain - ## HITS:1 COG:L33416 KEGG:ns NR:ns ## COG: L33416 COG0246 # Protein_GI_number: 15672006 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Lactococcus lactis # 5 328 2 334 385 112 26.0 1e-24 MKQKKLVVHFGAGALGRGLVVPMLYDSGCRIVLADTNPMLIEKMKDAKSYTLDVSDDEQQ RLHTIKIEDIVSPVTDEAMLLAYLHICDAVTTSVRRENLIHVAKVLAMAWGTESDSRRMV LCCENVEGVGAYFHSLLMDYAKNEQQRKNLSVIRIPDTIVDRICAAGSTIMEVTSESFHE CSVDADVVTDTGIAKIPSITNIRSHFYRKRYLLNTYADAMAFLALEKQHTYLYEAAKDEE IQNRLDPYIRLLIQLLKAKYGIAMNESEHWFQLYRKRLSNPEIPRELHTVARSLWSKMTL SERFICPLIELIHLHIDVSDGLAVIQEIIESQAGREGLTDDEVHKKLQDLWGGTEYGRKL LEMFIALE >gi|312955264|gb|AENW01000043.1| GENE 161 175413 - 176189 774 258 aa, chain - ## HITS:1 COG:MA0821 KEGG:ns NR:ns ## COG: MA0821 COG2140 # Protein_GI_number: 20089705 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Methanosarcina acetivorans str.C2A # 52 248 42 237 246 69 27.0 6e-12 MKLNTGMNLSVDLDKMEFIYDVATTGPLTEKRRLDDIRASLSDPNAEGPSIVYAVAMDVA KKKHMQDLIDRNLLYGAMIFEKGVIGEEPVRSQGHIHAVSASCNASTCEVYEIWAGEAYI YMQEYAGDDPGRCFAVHARTKDVVIVPPGWAHCTINADPSRAMLFGAWCVRDYGFDYEQV RAHRGVAFFPKVKDGSITFVQNTQYHPAQLEILKARAYPEFHLEQGVPIYTQYENNPERF RFVTHPQEAEEQWKEYRP >gi|312955264|gb|AENW01000043.1| GENE 162 176417 - 177493 1020 358 aa, chain - ## HITS:1 COG:BS_gutB KEGG:ns NR:ns ## COG: BS_gutB COG1063 # Protein_GI_number: 16077682 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Bacillus subtilis # 47 357 33 350 353 165 30.0 1e-40 MKYPTGKQESCTCIQQENGDIMKQAVLKQQGVLAIADVQEDLTLQADEVLVEVKVVTICG SDLSYFQAETLPHDLQYPLVLGHEMAGIVKETGTAVSGVQKGDRVAVEPQSYCGHCEACQ RGDYNFCESLQFMASKGISGALKQYVKWPQSSIYKLEDSMSFEEGALLEPLSVAYSAIEK LDFHKESRLVILGAGSIGLLMGVLMQELYPEVSVHLVDVYESKRDIGERLHMKKDQFLIE TAYELESMKPFTHIIDTTGNSEVVKQFLQHSIPQAVLLELGVSDRPLEISFKDIVYQGLR IIGSYRYTNTYPKLLKLFREQHLQVRDIITGRYPFEAVQTAFEQAMDGRHHSKIAIYL >gi|312955264|gb|AENW01000043.1| GENE 163 177507 - 178781 1481 424 aa, chain - ## HITS:1 COG:SA0238 KEGG:ns NR:ns ## COG: SA0238 COG3775 # Protein_GI_number: 15925950 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Staphylococcus aureus N315 # 1 420 1 418 419 258 37.0 1e-68 MEMLQDFFDWFFALGSSVFVPFIMFTLCMVFKGGLSKSLRSALYMGVGLVGLGLIVDYSV AAMTPVTESLVNNLGLSLNVIDIGYGNVSAAWAWPGVVWVILGIIAVNFIMVVLKWTKTL WVDMWNIWHGEFVAGMMWAFTGNIFIGVASGLILLVINMKLADYHAKKIQEFNGLEGISV VATSGTFTASWAQGCMWVINKIPGLRDIKASSEQIKEKFGIFGEMSVIGALMGTVMGIVA GFDFINTAQLAIKLAAVLVILPRMLSIIAEGIIPISNALSKFMREKFPGRELYIAVDPAI LLGDPSVMSTVILMYPISVMIAAVIPGCNFLPVASLAALPYWIGGMVPYTKGNIIHTVIC ATLWIIPATLIASSLAGICTDLCSMTGLFTDQIANGAMFTNWDEGGNILLWLFVKAGQLF GFGG >gi|312955264|gb|AENW01000043.1| GENE 164 178805 - 179104 436 99 aa, chain - ## HITS:1 COG:SA0237 KEGG:ns NR:ns ## COG: SA0237 COG3414 # Protein_GI_number: 15925949 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Staphylococcus aureus N315 # 7 80 4 76 92 56 41.0 9e-09 MNRKPLVLVVCGAGTLTSVIASQGVEQGLKKRGITDVEIKVGRLDDIGRYADRITVLVAS MNIRQKYDFPVINAISFLTGDEDGQERVVDKVADILKNK >gi|312955264|gb|AENW01000043.1| GENE 165 179094 - 179579 571 161 aa, chain - ## HITS:1 COG:lin0503 KEGG:ns NR:ns ## COG: lin0503 COG1762 # Protein_GI_number: 16799578 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 19 145 18 144 155 90 37.0 2e-18 MDQEIQIVRECILPHYAAQQKEDIIQELSKRMKERNLVNAGFQEAVLKREQKYPTGLLIG KRNIAIPHTEPQYVKVPCIGIATLKKSVAFHRMDACDELVDVDVVLLLALNQAHAHMEML SRIILMCQDEAFIEELLRAEQETDIEQIVRERLEGGKQHES >gi|312955264|gb|AENW01000043.1| GENE 166 179639 - 182509 2498 956 aa, chain - ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 114 455 110 459 464 303 45.0 9e-82 MNYTIKELIEKEDRKNPYTDEQLAKLCNMSREEVTLLRQEQGILDSRERRRQILLPEVKE ILQANEKISDRKLTAILNDRGYQISRFIARAVRDELEPKAKKEERLQMDPDRDFEQLIGY DGSMKRQISQAQAAVLYPPRGLHTLIHGPSGVGKSQLAEAMYHFAIHVGTIQKDSPLVIF NCADYADNSELLLSQLFGYVKGAFTGADHEKSGLVEKADGGILFLDEVHRLPSEGQEMLF YLIDKGMYRKLGETDNTRTARLLIIAATTEDLDSYLLTTFRRRIPMLIDLPPLSERPLLE RLMIIKVFLFQEALRIQQNIILERDALRLLLNYPCPGNIGQLRSDIQVACARSFLKHITY GDEQLIIALDDLPPHVGNLALNTASRESRKLCESDLFVSCTKPREQSAHMGPNIYQFIEE KYEALLNEGCTEHEVYQTLGKELDTEMDNLFNKIKYQQVDRKNLEEVVGNRIIQSVQKSV DIARISMQDISPNILSPLCLHVSASYERMKCGKRIMNPQLEKIKKEYPLEFATARKMCMQ YHEDFMIELPEDEIAFIAMYLKTFTKKKKEESRGKIGIIVLTHGNVGIEMVEVANQLLNA SFAVGLRCALDEPSSHALQRTQHAVEQLDEGRGCLILTDMGSLVTFGQIITQRTGIDTRT ISRVDTVMVIEAIRRAILEETTLDELEQALNMEKEINFHGNLELEEKETVIVSICLTGKG SAVLIQSKIQKLLQEHNLTIRILTLGVISENGIEFELDHLARNYHILAILGNFQIEYHQI PFLSTNEILNGTAQELLSIIKNNRQPGKTVNCLQELLDEDIILCHVQDALCKNDILEKLV DLLVKKEHVSEEYLLDVYKREAMGATIMGKAAIPHGFTEHVTKPAIAILTLQDAILWEDD FETNIILMPALQEESIAYTQELFSICSDSTLIQALSACQKPQDIIRLIATYTKPSN >gi|312955264|gb|AENW01000043.1| GENE 167 182815 - 183372 440 185 aa, chain - ## HITS:0 COG:no KEGG:no NR:no METISRRLSIFLAKRGLIEEDEVDIIRFALELLLTQGIQIVSMLILGYFLQFFWETVLYL CMLLFLKRYTGGYHAKTYGRCYLITMIIYLLVLLCVEYLNIYSLLVFLPAGLGIFIYFGP CLSYKTMLERRKQQLHLKLSLALCLVLLLLFLGVHEFRYTIEIAAILFFTAVMMLPVFWK KSKTI >gi|312955264|gb|AENW01000043.1| GENE 168 183356 - 183499 134 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFEIKKKLIDYALKNVSNTSVFGHFMPKPFTYKKESVKSQKHGNNK >gi|312955264|gb|AENW01000043.1| GENE 169 183519 - 184781 666 420 aa, chain - ## HITS:1 COG:CAC1582 KEGG:ns NR:ns ## COG: CAC1582 COG2972 # Protein_GI_number: 15894860 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Clostridium acetobutylicum # 191 418 211 452 452 82 25.0 2e-15 MNEFMEYVYCLIYIVGIAFCVIRVNNDVKWNTRTVLLIIGYSYINMLVTNNIDVSDIMFL VSNMFSTLPDFLFICVLCRKIKLLNLFYLLFYTVSFMTFIEIFMYAHIHLFNGAFDATFV PGILRTASIMFANVCAAIAFQIPVYLYRRFFVVLSKKQLLPFVFLQIFFMLVLMMYMREL ELYPKDLAMFFVFLLMVVQTLTVDFIFVRFWLLAQEKSEIELTELSRNIQNQYMHDLQEE QEKNRELRHDMRNHIEILESIHHDRDFLNYLDRVRKDVDELGQRIKTGNMFLDACLNTKI ESNNDIQFEVSAFVNDEIGIEDKDMCALVFNMLDNAIDAARGSEHKKVDIKLMIHNDSLI IEVTNSTVQAPDFHSRKGTGHGYGMKIIERIAAQYEGMVKYDYDEQSHTVSVHCLMPLPK >gi|312955264|gb|AENW01000043.1| GENE 170 185678 - 186376 770 232 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 30 222 29 223 234 65 27.0 1e-10 MQTVYHIALLDDEPCYTNMIRDKIEAFGLEEQLFIDTYNNVNDFLRSKHIYDILLLDIEM PGMDGIHLAKYIANERTLVIYVTNYADRMEDAFGINVFRYVLKSKIDEKLKRTLQDAFEF LQDNADFKIRTDGGYEMLAQKDIIYMEYFSKDVYAYTKDREYIFRMYSMERMMKELNSRF VQINRANIVNIEYIRSIRGFELHVKGIDRVLKISRRRKNEIMDALFQMTTKL >gi|312955264|gb|AENW01000043.1| GENE 171 186408 - 188009 1713 533 aa, chain - ## HITS:1 COG:BH0867 KEGG:ns NR:ns ## COG: BH0867 COG0405 # Protein_GI_number: 15613430 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Bacillus halodurans # 1 533 4 539 539 580 55.0 1e-165 MFNIYHQPYTRGRYPTVAANGVVATGNNLAAAAGLQIMREGGNAIDSAIATAATLTVVEP TANGIGSDAFAIVWYKDAMYGLNSSGCAPMEISIEKLKEQGITEMPKHGWTPVTVPGAPK AWAELSRRFGKLPFAQVLAPAITYARDGYPVPPELSRMWKMAVRSYTDKKDDPVFAQWFQ TFTFQGMAPEVGQLVKLPDHAKTLEKIAETQAAALYEGELAQRIEEDSIAHGGYLRKKDL QQHKAIWVDPVSVHYHGYDVWELPPNGQGIVALMALNILKEFQFAQRDEEMFHHQFEAMK MAFADGLHHITDAQYMKTGVQSLLHAAYGRERSREIEAFAKQPAVHMPPKSGTVYLCTAD SEGNMVSFIQSNYMGFGSGVVVKDTGIALQNRGHDFSLNRNHVNALVPGKRTYHTIIPGF LTRNGKAVGPFGVMGGYMQPQGHVQVVMNMIDFHLNPQQALDAPRWQWVKDKKFIIEDSF DTNIARKLQERGHQLQVDLETAGFGRGQIIVRLDNGTFMAGSESRTDSSIACW >gi|312955264|gb|AENW01000043.1| GENE 172 188153 - 188701 727 182 aa, chain + ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 6 179 8 181 186 112 37.0 3e-25 MKIYWELFSVFMRIGAFTFGGGYAMLPLIQKEIVDKKHWATEEEIMDYYAVAQCTPGIIM VNTATFIGFYEKGILGAIIATLGVVTPSIIIILLIASVLTTYSSLAMVQHALAGIRVAVC VLVLNAVVKLWKSGIKDTFGILLFAVVLAAITFTSVSTVLVVIIAALLGVIVCALRRREV KE >gi|312955264|gb|AENW01000043.1| GENE 173 188698 - 189255 531 185 aa, chain + ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 10 144 7 142 176 92 39.0 6e-19 MNLELLLLAFYEFFKTGLFALGGGLATIPFLTEMMNKYHWFTADMLTDMIAVSESTPGAI GINMATYTGYHINGVLGGIVATLGLVAPSIIVICIVAQFLKKFKDSELVKSVFYGIRPAV TALIASAGITIFIAALFQDSENFMEMVKWPCILLFAVIFYLSNKRKWHPILCIAASAAVG ILFQL >gi|312955264|gb|AENW01000043.1| GENE 174 189711 - 191003 712 430 aa, chain - ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 1 427 23 450 470 243 33.0 4e-64 MYRMIEENFLKWKKQENHKPLLISGSRQVGKTYSILNFAKKHYLSYVYINFERDDDIRAF FEQTSKPEEIMMNLQVFFPEADWKAKEILVILDEIQACPQALTSIKFLSTETPYDYILSG SLLGVAVNRTSSYPVGYVESMEMQPMGFMEFLYAVGLKAEHISYLKECYTEKRSVNEGIH KEYMKHFRNYIITGGMPEAVKTFVETGDFVKTRNIQQQIVEGYYRDMAKYADASEKIRTH ECFRSIPLQLAKENKKFQYMLVRKGGQAAHFENSLQWLKDSGTISFCYRLQCIDVPMEAY EESSVYKIYMSDTGLLLSQFKENVMQDILKNELGVYKGAIYENIVAQMLTFNKYSLHYFE PSSHSEIDFIIEQDCGIVPIEVKSSMNTRARSLKAYIDKYEPKRALRFSIRNLNISERIE DYPLYMLMFL >gi|312955264|gb|AENW01000043.1| GENE 175 191273 - 191725 164 150 aa, chain - ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 9 146 294 431 433 76 32.0 2e-14 MEIIDVLSTSNMYLNYLIHSKVEKIKSLNIDLTCGFKNTLDFLNLFELTTILGNLIDNAI EAQKYVENKRFIKLSTIKKADRVRLIIENSCNIEEIHMDNQKLITSKEDKENHGIGFNRV CEVVKEKNGIITRTVNHKIFTVEIVLPIES >gi|312955264|gb|AENW01000043.1| GENE 176 191834 - 193183 1311 449 aa, chain - ## HITS:1 COG:TM0815 KEGG:ns NR:ns ## COG: TM0815 COG0534 # Protein_GI_number: 15643578 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Thermotoga maritima # 16 438 22 445 464 176 29.0 1e-43 MKTRINLLEGNILPALSALALPIMATSLIQMAYNLIDMIWIGKIGASAVASVGAAGMFMW LSNGLVTLAKMGGQIKVGHALGAQKKEDAASYAQSSIQMGIVFAIGFGILSIVFADEMIG FFQLNSAQVIQDAKLYLMITCGLVIFSFMNQIFTGILTAMGNSRTSFIATGIGLVLNIVL DPLFIFGFGAIPPMGVAGAAIATVLAQLVVMLLFLHTILRDTVLFSNVHILHSYSSQHTM EIFRIGLPSAVQSMLFSGISMVIARLIAGWGDAAVAVQKVGSQIESISWMTAEGYAAALN SFVAQNHGAKNTDRIREGYRLSMIVMLSWGVFCSLVLIVFPQLIFQVFIQEAEVLPMGVD YLRILGVSQLFMCMEITTAGAFSGLGKTLPPSIVSITLTGARIPMAILLGRWLGLNGVWW AITISSIGKGIVLLGWFLKDMKRAGMPER >gi|312955264|gb|AENW01000043.1| GENE 177 193240 - 193704 574 154 aa, chain - ## HITS:1 COG:CAC2942 KEGG:ns NR:ns ## COG: CAC2942 COG1854 # Protein_GI_number: 15896195 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Clostridium acetobutylicum # 1 154 1 158 158 135 40.0 4e-32 MEKITSFCIDHDILEKGMYISRIDGDIITYDLRMVKPNCGTYLDNDGLHTFEHLFATYVR NSVYSDAVIYAGPMGCRTGFYFLTRDSISKAQAVQLVKDTMAFIAGFEGDIPGAQESKEC GNYLDHDLAKAKAYAKAYGQVMKDWNEEQLVYPQ >gi|312955264|gb|AENW01000043.1| GENE 178 194027 - 194905 794 292 aa, chain + ## HITS:1 COG:no KEGG:CKR_0223 NR:ns ## KEGG: CKR_0223 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 1 286 1 286 287 354 56.0 3e-96 MRTEDEIMKLLINTAAQDDRIRAAYLEGSRVNPDVPRDMFQDYDVVYIVKETASFQKDNS WIDRFGERLYMQYPEDSVYDSGDKENCYGWLMQLRDGNRIDLHVCTQDYAKTHLEAYQIL LDKDGILPQPSKKALQQYWIQKPSQQQFSCTCNEYWWCLNNVAKGLKRNELPYALDVIDF TLRPMLKRLLEWKIGISYNFQISAGKCGKYMEQLLPDAVYQTFLATYAKAESEALWQAVF TMCEQFHETAIEIGCQLDLTYNAREALNSMKYLKDVYFLPRGAKELQEYMQR >gi|312955264|gb|AENW01000043.1| GENE 179 195069 - 197144 2078 691 aa, chain - ## HITS:1 COG:BH0193_1 KEGG:ns NR:ns ## COG: BH0193_1 COG3711 # Protein_GI_number: 15612756 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 14 529 16 518 537 170 27.0 1e-41 MDNELMALMQVLSNKPYLTLKDIEVSAGITRRQATYRIEKVNDLLRQHHAPIITIGTAKE IRLDSKARQKLEELLQEMNQSSQYYMNKKERQIYMYLMLFMNSEYLSLSDFIDSLGVSRS TVLLDFKELTQMLEERGIRVRNNRTKGYYLIGSEMEIRRMMMKYVIYTLAEEQSAKIFDV FIDDFNLDIFDYSRLVITELAQRHNIRFVEDRLVEFIYIFIFLKARMQSGKNTEEEIHAL LDMEAISSMKEYEFTVELLKNYKNTDNITNTDINYISSWILGISFGDINEETKDCILISD IIGKIMTRFEYLSGAHYRNTEEIFIQLYSHFRPAYYRLLCRLPIFNPLCDKVREEYRELY QLVEETMKPFHVIFGGDIPAGEIAYLTMHFASIYSDQKAFEIAKQKTALVVCSNGIGSSA ILYNELTGMFPELHFLPPLETSHIHDVKEHVDIIFSTSYVSLGAGIHAPVIRVSPVMSIA ERYQVMREVYMQMGSHFLKQPNVDVVMGIVAKYANIQNEHALYNELITYFSHIDTTTQEE RVLHLADMVKPELIRLHMDADYWEEAVRKAYEPMVQHGYITQNYVEETISSVRIVGPYIV ITKHVALPHVKPEAGALSVALGVGVLNSAIEFGNRDNDPVKYIFSLSATDNQTHLCAMAE LLEMFNKQEFFDMLDQAENSDQVMVYLKENQ >gi|312955264|gb|AENW01000043.1| GENE 180 197313 - 197963 791 216 aa, chain - ## HITS:1 COG:CAC2973 KEGG:ns NR:ns ## COG: CAC2973 COG0800 # Protein_GI_number: 15896226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Clostridium acetobutylicum # 1 190 1 190 213 166 42.0 3e-41 MQKAELTKRIAETGAMAIVRVETIERGIEIANGCLEGGVSCLEISYTLPNAGEVIQALRE TFQDRLIIGAGTVLDSETARHAILHNAQFIIAPNFSREVAVMCNRYQIPYAPGCTTLTEA LQALEAGAAFIKAFPISDFYGPRLVSVFKTPIPYMPILASGGIDLKNLKDYVLRGVDCCG FGSLLTKGSREEIAANARSIRTLIDEARLEMQTTAG >gi|312955264|gb|AENW01000043.1| GENE 181 197989 - 198471 410 160 aa, chain - ## HITS:1 COG:no KEGG:Apar_1283 NR:ns ## KEGG: Apar_1283 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 6 152 40 195 199 62 27.0 7e-09 MKEYIVREDRGKLLLYTLLNLCLTILLMLLTIYVYGSGHFLLAFLSITGLWFSVKAMCRY GFRLVKNTPVCEFKRDEVILPALPKEQRHMKYRDIRAVKILRSSSSVKLFFSGDHVTHPS GWQYAGAVYLFQRKKLNDVQKYAMDCLHTHHISFEVVQKA >gi|312955264|gb|AENW01000043.1| GENE 182 198495 - 199385 1250 296 aa, chain - ## HITS:1 COG:BH1742 KEGG:ns NR:ns ## COG: BH1742 COG0329 # Protein_GI_number: 15614305 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Bacillus halodurans # 1 287 1 283 295 179 36.0 5e-45 MKLEGIITPIVTPFHRDEEQSINYEATKQLIDHLIAKGVKGIFILGSNGEFHVIEEAEKI EFAEKVIGMVDHRVPVYVGTGACSTKETIRLSKKMEELGADALSVITPYFLTPTEEELVQ HFTAVAESVSIPIILYNIPKATGCNLSAEVVGRLAEVENIRGIKDSSGKEENLKAYAELA KRDDFDLLIGSDSKISYGYALGASGAVAGTSNVITEVLVELDRALRKGETEKAEELQKDI NVLRGVLKLGTVPVVMKRAAELAGIAEIGPARKPVLECSAQDDEKIKEMLQYYHLI >gi|312955264|gb|AENW01000043.1| GENE 183 199386 - 200000 901 204 aa, chain - ## HITS:1 COG:NMB0352_1 KEGG:ns NR:ns ## COG: NMB0352_1 COG0794 # Protein_GI_number: 15676267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Neisseria meningitidis MC58 # 9 195 12 194 207 122 35.0 6e-28 MAVEKEQIREFLDIESSELKNFIDSIDAEALIAARELILQAEQNHNRVHVTGIGKPGHVA GYAASLLSSTGTPTYELHGTEAVHGSAGQVLSGDVVIAISNSGETTELKATVETLKSNGA KLIALTGKADSWLAKQGDVTLIAGVNQEGDAMNKPPRASILAEMVMLQSLSILLQNAKNL TPQQYVKWHPGGSLGASIKESGDR >gi|312955264|gb|AENW01000043.1| GENE 184 200005 - 200766 850 253 aa, chain - ## HITS:1 COG:STM2289 KEGG:ns NR:ns ## COG: STM2289 COG3836 # Protein_GI_number: 16765616 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 28 251 34 258 267 124 32.0 2e-28 MELKELIKQQKAKGVLVKALAHPSLVIMAQDCGMDFILYDCEHGVLSYEQLHDLMVLGNM RKLSSIVRVAQLARSDVSRILDCGACGVMVPMIETAEQAEQLVQWSKYPPLGKRSYSGGA NTHYAPGGNHALHMKQLNEKTMSIVQIETRQGVENIDAILNVKGIDGVLIGPCDLAISLG WPDDLMREEELNMIQKVADACLKRDLGFGIIGGIAMQEYFKKESSLLVSAIDTALMREGL KQAVREYEQLERK >gi|312955264|gb|AENW01000043.1| GENE 185 200826 - 202115 1471 429 aa, chain - ## HITS:1 COG:YPO2782 KEGG:ns NR:ns ## COG: YPO2782 COG3037 # Protein_GI_number: 16122986 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 13 425 16 417 418 269 37.0 6e-72 MLDAILAQSRNTALIMGLIAMIGLLLQKKHATDVISGTMKTVIGFMVFNIGSSAMSGVVQ TFTDLFNVAFGIEGVTTQVEVATGLALNTYGTEVALVMLLGFVVNLIVAKFTRFKAIFLT GQHFLYFACVIALIFIANGLPMPLTVIAGGILLGFCGAALPSFCQPFMNKITGADNLAMG HFNCIGYAFSGYVGKLFGKMGKSTEEKKDASTVNMPKFFELFRDFIFSVALFMVVLFYVA VIACVVNGHMDIVLEKAGNDIWFIYPFLQGLQFAAGMSVLIYGVRQFIAEITAAFVAISE KYIPNSKPAVDCPAIFPFAPTAVLIGFVGAFVGGLAAMAIMIACNSSVIMIPAAGICFFS GGTCGIFGNAYGGWKGALVGSFIVGMALTGLPLILYPAFAGLGISGASFPNVDYNIIGAF LNWILGIFA >gi|312955264|gb|AENW01000043.1| GENE 186 202164 - 202439 513 91 aa, chain - ## HITS:1 COG:no KEGG:Apar_1285 NR:ns ## KEGG: Apar_1285 # Name: not_defined # Def: phosphotransferase system lactose/cellobiose-specific IIB subunit # Organism: A.parvulum # Pathway: Ascorbate and aldarate metabolism [PATH:apv00053]; Phosphotransferase system (PTS) [PATH:apv02060] # 2 89 6 95 99 119 70.0 4e-26 MYKALVCCRAGMGSSMLLKIKADQVISENGYPIQTEHGNLDSLNGFSGDLVITMDDLADE LKDKVPYALGIRNIMDKVEMKSKMEEFLATK >gi|312955264|gb|AENW01000043.1| GENE 187 202458 - 202898 566 146 aa, chain - ## HITS:1 COG:lin2929 KEGG:ns NR:ns ## COG: lin2929 COG1762 # Protein_GI_number: 16801988 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 1 146 1 146 148 110 42.0 8e-25 MLKDLTDEKLIRLNIEAADWEEAIRKSAQPLIDEHKVKPSYVDDMITGVKENGPYIVLTK HVALPHARPESGALESAIGIATLKTPVVFGNEANDPVKYLFCLSAKDNMEHLNALAELAG MFEDAQFYRLLEQAESAKEIMEYISK >gi|312955264|gb|AENW01000043.1| GENE 188 203332 - 203628 427 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914970|ref|ZP_02077184.1| ## NR: gi|160914970|ref|ZP_02077184.1| hypothetical protein EUBDOL_00978 [Eubacterium dolichum DSM 3991] # 1 96 1 96 97 170 92.0 3e-41 MEKLTMQDYLNCLQAKKQEAHDKQWLYIEVNAKDLLEECEPGIRNQNVCCKAMLDAMLEG DGFIVEPKNKSKCAASLTIRYYVDNLSPERRKYAEVNQ >gi|312955264|gb|AENW01000043.1| GENE 189 203753 - 204307 760 184 aa, chain - ## HITS:1 COG:MT1213 KEGG:ns NR:ns ## COG: MT1213 COG1695 # Protein_GI_number: 15840619 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 1 85 59 143 247 82 44.0 4e-16 MPLKHAILGLLNYAEMTGYDIDRYFKSSIAFFWHAQTSQIYKELNTCTKHNWVDSEIVYQ SDKPNKKVFHITDEGRLELNRWLADADLEDIMKYKNPLLIKIFFSSNIDIDKTMRLLEKY IRECSDIIDKMNEDLNKIPEFEAQIHKDNESFYWGMTMTYGFMYYQNEIKWANWCIDKLK EKIG >gi|312955264|gb|AENW01000043.1| GENE 190 204375 - 205661 1228 428 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399814|ref|ZP_06643960.1| ## NR: gi|293399814|ref|ZP_06643960.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 420 1 421 439 520 60.0 1e-145 MLCEKTFYELSLLSYFDTYAVNIPVSDMIRHIQEDEQLMQDYGQYPDFQNNMKLVRQINP DEYAHMTVKEWYNDNADSGVVYYTFEMEDALIFAFRGSEKLDDVHHKTGWQDWKDNFRMF LKDPTWQQILTLHQIQKTDIQKPFYMCGHSKGGNLSLYVALTMKKKLQDYLVKVVSFNAP GITKPILSLYEQRAKDPEFLEKLLIFENENDCVSAFFENLKEPVYVRSCYPCTNMEELYH NHNLYAMDFRDNAYVMAEKKTVMPKFFYHFINDFFMNLKEERVQRVVAKMDEYFDSGCSM EELYKLMLVDVSRYVSLFEDIPEEEMATITLQDLIDRRKTKLIMDKVKELQPNKTLQKMA DTVRISSPVAKLNEIDMKEITQGLIDNYELMVKEKTKEFQAMITENNEKIMHAIRSIRNR EGDSQERI >gi|312955264|gb|AENW01000043.1| GENE 191 205769 - 207253 1455 494 aa, chain + ## HITS:1 COG:SP0965_2 KEGG:ns NR:ns ## COG: SP0965_2 COG4193 # Protein_GI_number: 15900842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 277 409 30 156 156 97 42.0 4e-20 MKKNVRKRKRKKINRYIPILASGLLIALTVLVISWVFSARRTYTVVILKEGVEQEYAQYH SLAQAKEEMLTQTKRAEKQNAGIRYDHKLIAIGYGVVQFQRKDCTLNTSYRMAKTEETGY TNGCYGNDAAFVDISDDGSEVRFRQAGVDGWAAVDEVTLHNYYDENDVASINHYTAKSHL LTHKITTNIAESSYASELSMGETGLKDHAYYSYDGHYYYSTFEDMIYDYRKGSHERAANK EAFYNYYQFLPHRSISRYAADDINWYVENYLGFSSSSQSLLYDSGAWFIEAQKRYSTNAI MMFALAMNESDFGRSAIAREKKNLFGHAAYDDSPSQSASGYKSVRESILAHAEKYLQNSY LNPLSDLYHGGFFGDKAGGMNVRYASDPYWGEKAADFYRTFDMVMQGRDRDISYLVSEQP VTVYSSKKKDTVLYRAGAVPCSHLVLKQEDGWFQVRSDGPVHNGTLQKNSSTYGLKNAYG FIQEDLTNQIRILQ >gi|312955264|gb|AENW01000043.1| GENE 192 207292 - 207957 769 221 aa, chain + ## HITS:1 COG:no KEGG:Sterm_2682 NR:ns ## KEGG: Sterm_2682 # Name: not_defined # Def: HAD-superfamily hydrolase, subfamily IA, variant 3 # Organism: S.termitidis # Pathway: not_defined # 1 221 1 226 226 165 41.0 1e-39 MNKKGLLFDFNGTMFFDSEKHKEAWDVFSQKYRGCPISDYELDHTHGKTNKKIIELLLGD MRDEESEKLSKAKEALYRECCINDPKMFHLVDGLEDVLDYLKELQIPMTICSASIKDNID FFISSFHLDRWFDIDKIIYDDGTHVDKISMFHEGAQAIGVKLEDCMIIEDSLSGLDFAYC CQPGRLIAITTPERKAAYEKIAGVYAVIHDFRNFDTSFFLK >gi|312955264|gb|AENW01000043.1| GENE 193 208319 - 209071 742 250 aa, chain - ## HITS:1 COG:lin2869 KEGG:ns NR:ns ## COG: lin2869 COG0363 # Protein_GI_number: 16801929 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Listeria innocua # 1 248 1 237 239 164 40.0 1e-40 MKFIVTRDYEELSQVMAQLMLKHMHTEKERTNIAITTGSTCIQGYRLLAKQVHGRPWFDP VHYYIFDEFWFQDERHEKEISVCQISLDEKYFHAAEVAPDHIHDLNMENYKTFDKDIQKQ GGLDLVIMGIGKNGHFCGNQPGTFDSWNAGTRLVRTDETPYLREYSRKLLHHDFHSEDTS RIPEYYITMGPKTIMSAKNIIFLLSGKEKAETAKKAFIDPVTMEFPVSIFQLHPHVTVIL DEAAAALLPL >gi|312955264|gb|AENW01000043.1| GENE 194 209068 - 209538 194 156 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRVHRFEQDCQYIEDTKHHKLYHIPAEQCGIFQVLHGALFAGTALCGAALGLSIPLWLA VSAGCMLAVLLKLYEHRVFLPRLSCVKRLLKQMDISRRQHHKLLIISGFLIVFPLLILRN QTYQNPVVVTLALTVTGISAFQFIRQLRILRKRRML >gi|312955264|gb|AENW01000043.1| GENE 195 209538 - 210239 714 233 aa, chain - ## HITS:1 COG:lin2869 KEGG:ns NR:ns ## COG: lin2869 COG0363 # Protein_GI_number: 16801929 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Listeria innocua # 3 229 18 237 239 172 41.0 5e-43 MAQLMLKHMHSDKERVNISITTGKTPVRGYQILAEQTKGKAYFNNVHYYIFDEFWYKDDP KGICRASLDYKYFDLADVEESHIHNLDESNADTFDEDIQQVGGLDLIIMGVGSNGHFCGN QPGTFDNWNTGTHRIDRHATPLVEELLLQLLKEDLHSDDTARIPDHYISMGPKTVMAAKS IVFLMSGEQKAEAVKRAFFGPISEDFPVSIFQLHPDVTVVLDEAAAGRIKELL >gi|312955264|gb|AENW01000043.1| GENE 196 210352 - 211116 607 254 aa, chain - ## HITS:1 COG:lin2869 KEGG:ns NR:ns ## COG: lin2869 COG0363 # Protein_GI_number: 16801929 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Listeria innocua # 1 250 1 237 239 159 36.0 5e-39 MRFVITKDYAELSQVISSTMLKHMHTDRPRVNICVTTGTTPVQAYQILAPLVKDKPYFEH VHYYVVDEFWYAKEPGTQDVDIPVNKMSMDLKFFQAANIPEERIHTLRDETVDSFDAAIQ QIGGMDMVLMGIGTDGHFCGNHPGTFTNWNQGCHSIDRYCTPQVNQLLEFLLKDDIHSDD VSRIPDHYLTMGPKTIMDAKNIVMIFSGKGKAETVRRAFFGPVTMDFPVSVFQLHPHVSV LLDEAAASEIRELL >gi|312955264|gb|AENW01000043.1| GENE 197 211119 - 211277 70 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLIYEFQSREHEKRKQATARMMGISVQSVDTSLPCHQSIYNEDKDMKERRK >gi|312955264|gb|AENW01000043.1| GENE 198 211432 - 214191 2140 919 aa, chain + ## HITS:1 COG:STM4534_2 KEGG:ns NR:ns ## COG: STM4534_2 COG3933 # Protein_GI_number: 16767778 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 461 916 1 448 461 216 28.0 1e-55 MQKGAAMSRETKNEVYEFIVKCTFEFCSNQLLKCDSSYLSKRLNISRSLASQYLNEFYRD GIFLKVQTRPVYFLDRHTLESVYQIKLENNEFYDEKELTDQFGRSLRTKRSFLKAVGHDT SLSECILQCQSAIKYPPNGLPILLYGERGVGKTFFTRLIYQYAIEESLIDKDARLVFFNE SQYEESNGREKDVQIIFGTYLDDGSQKYLGGLIARAKNGILVIENVERLSPQCYFLLIQY MQSGEYTISSGKQGKVFKSRTRIIFTSCIDSKQNIHNAFFHSIPIICHIPSLQNRPIEDK EMLIIEFFKEEGLRLKKNILISSKAFIALVNHTYENNIEELSTCIQSSCANAYLSHDVSD DLHIYLYHLPVSIINSLTLDKSNSEEEYMIDICKYLPQTKNGRIIDFFDFIVTAYREYEK GSIDLKLFLERCIDNMNVYYDYIVFEHKYYNARVRAYEKAVLDVFEHMLDRYDIYIPSNC AFVVARVIYSYMQMFSSIRSYEVQHAEEISKVIHLLKEHYPTGYRSAMEIMTKIRQTIDV EINDMNLIFLILNIQFYNRSIDKYRYNCIIISHGYSTASSIADAANKLIGSHIMEGIDMP VSTSMDDIVMKLRKYINDNSIRKDLILLVDMGSLENIGTQLIEECGINIGIINNVSTRMA LHVAGEIRRNVEMKEILSKVSRETVCEYKIFSNINRKKAIIFTSETGMEAIERVVQLFKN SMPRQIDISIFAYDCLSLQKNKEQDDIFKLYDVLFIVTTTRLDIRNVSSVPMEDVIAFKD VDSITSTLNSYFTKNEQEQFNRNLIKNFTLENVMNYLTVLNADKLITFIEEALDHLQELL GMLIANETMVGMYIHISCIIERLVMKNEIAQKERGYSLDVEQKRFQKMFNDSFARIMDYY KVDIPVSEILYMYDYIFKK >gi|312955264|gb|AENW01000043.1| GENE 199 214260 - 214730 496 156 aa, chain + ## HITS:1 COG:SP0284_2 KEGG:ns NR:ns ## COG: SP0284_2 COG3444 # Protein_GI_number: 15900218 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 2 147 3 148 163 84 35.0 6e-17 MISLFRIDFRLLHYQTSQVWPKKLDINMIVVANDAVIQDPLRMSLMKMSAPANCGLKILS VEKAGLFLMDPKNERRRIELLVETPKDALRIIRSVPGIQHLNVALMKGGPGKKMVCPSLA FAPEDYDDLRSIVDLGVKAESYVTPDERPVSITKYL >gi|312955264|gb|AENW01000043.1| GENE 200 214814 - 215563 991 249 aa, chain + ## HITS:1 COG:YPO0835 KEGG:ns NR:ns ## COG: YPO0835 COG3715 # Protein_GI_number: 16121143 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Yersinia pestis # 4 237 5 236 262 129 34.0 7e-30 MQTAILLGLVYAFAWSMDNIAGSSFMDRPIVCGALTGLVMGNFEQGLVIGGTLELVWMGF ISYAGIINGETRIGAILGTYFALATGNSFDVAISIAMPIAILGGNVSNAYNIVVSYLMHR WADKWAEEGNYKKIGQFHLGVGFVKLFFMTAIVFLTVLLGTGAITSLINVIPENVLNGLG KAGEMLTAVGFGMLLNILWDKRFIGLYFVGFAVAAFLNLNVIAITIIATGLGFVAMYTSG NEKGEDAYE >gi|312955264|gb|AENW01000043.1| GENE 201 215556 - 216377 778 273 aa, chain + ## HITS:1 COG:FN0629 KEGG:ns NR:ns ## COG: FN0629 COG3716 # Protein_GI_number: 19703964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Fusobacterium nucleatum # 12 270 20 275 279 191 38.0 1e-48 MSEKAFEITKSDLHKVFWRSMPIEISYNSERLHNMFYVYSLTPIFKKIYKDDPQGMRDAL VRHMQFYNTCPQFEAIVVGIVAALEVKNAESGNTMGPTIEAVKTSLMGPTGVIGDAFFQT GGFRIISASIGASMCIAGNPFGLLLYFLIYNVPNYLVHWWGIHQGFKMGSVFIEKVVNSG VLQKITDLCLIVGLSVVGALTSAYVSLSTPLQISYGKEPIIIQELFDQICPNLLPLLLTL LCAWLMRKKNVKPTVLMIWVIIIGVILGSFGII >gi|312955264|gb|AENW01000043.1| GENE 202 216379 - 217512 541 377 aa, chain + ## HITS:1 COG:FN0628 KEGG:ns NR:ns ## COG: FN0628 COG0449 # Protein_GI_number: 19703963 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Fusobacterium nucleatum # 13 352 2 330 352 75 20.0 2e-13 MEGAKTTAKEQERTALLRTITDEPLLIRRLLQHKKELTEDFVQHFLTHTVKKVYFSGQAS GTFVGNMLAPCMEKLLQVETEVCNPASFPEYFQFNINQQYSPDEMLMLCPAHSGTTTGPI RMAQECKRLNIPVVCITIDSNSPLANLSDIVINKLCGSEESFIETRTHMASLLITFLCII ETANQKELISRQQYTYYQQYFTRLEDNVNQIIKDTADWYKNHRELLQTKMVARYIGAGPY YAVAQEGGLKIAEAASIAALAYEQEEFMHTGTTQIQKDTLLFLIAPDGVQEMRMLELIRW CRLYSDYVILITNHSHPLKDSKALLCHFQDDPYCSVMEYMVPFQMLAHLLAEDRGLSVVH AANDGASAYLKTHTEEV >gi|312955264|gb|AENW01000043.1| GENE 203 217516 - 217905 274 129 aa, chain + ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 3 114 5 115 140 71 35.0 3e-13 MKYIIATHGYLADGYVSSIQVLTKKNNIYAVNAYVDDRDAALQLKTIIESFENQEEIIIF TDLMCGSMTQAVAPYLDRYNVRCITGINLPLILEFVLTTSTIDDTYIEHTIQEAQKQMVF VNHLLKQTQ >gi|312955264|gb|AENW01000043.1| GENE 204 218095 - 218661 305 188 aa, chain + ## HITS:1 COG:mll5118 KEGG:ns NR:ns ## COG: mll5118 COG1595 # Protein_GI_number: 13474268 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mesorhizobium loti # 3 179 8 183 188 73 29.0 2e-13 MREQQILHKIKKGDQQTLNNFIQDLYPYVYSFTYRKMQGDDSAKDITQEVFVRFIRQLPM YHAQGKTLHYLYRIASNLCHDYHRKMQRDLHTDIDRQENLISADSDVHEVILDQIRNEEL MYYIGELSDSQQDVILLKYYHQMTFKEIAHSFSIPVSTVKTRHTAALKRLCALWKEGGYH ETETHTGR >gi|312955264|gb|AENW01000043.1| GENE 205 218633 - 219349 230 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402416|ref|ZP_06646552.1| ## NR: gi|293402416|ref|ZP_06646552.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 236 1 232 232 65 24.0 2e-09 MKQKLIQVDEAAMEQTILLCQKEQEQYTQKNCTSLLQLILRYMWLDFRFYMVLSIIGLLI SILLITLDAVNAQIYTAIYFFILGISALYEYYKCSHYRMLDIISPVYLNPCRAFLIRTAG IALNGLVMSFILLVIFILKESWIPADFIMTGIVPLYAMQIIFTHLLHRIKGYISALATYS MFYCIYLFIYSQYIRYMISNPQAVLVILIVSCLTLFNMRQLNKGMSDTERRQQKWSWL >gi|312955264|gb|AENW01000043.1| GENE 206 219334 - 220206 807 290 aa, chain + ## HITS:1 COG:all2672 KEGG:ns NR:ns ## COG: all2672 COG1131 # Protein_GI_number: 17230164 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Nostoc sp. PCC 7120 # 3 281 2 279 293 197 36.0 2e-50 MELVIEHVNKSFKKNQVLYDVNLTIEKGVHGLLGANGSGKTTLMRILCGLLPKDGGSISY DEIDALKQYDVYASKIGYMPQHFGFYPHYTVYEFLEYISILKNQSKQYSRKRIDELLHIL HLEDKRKTKMKQLSGGMLRRVGIAQALLNKPEILILDEPTAGLDPKERIIFRNLIASLSQ ECIVLLSTHIVSDIETIADDIIVMKEGKIILHDTPKELLHTMKEKVWQVTLPKKEALSLM ASHIIVKSHNVDNDIELRIVADDCPHTLAHNITPDLDDLYLYYFKEGDFL >gi|312955264|gb|AENW01000043.1| GENE 207 220203 - 221435 1034 410 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402414|ref|ZP_06646550.1| ## NR: gi|293402414|ref|ZP_06646550.1| hypothetical protein HMPREF0863_02691 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 409 1 415 488 219 34.0 3e-55 MRRLIQSEFKKIFKSKINIVLLLILFIFNGYRTYQVYHQPLQYRTDIVMKDENGIERTGL AYWRLADQIQHSYAGTLSEKTIQQMDKDFRAIMNKYTETTLDEEKMKAVYGDNYETLLKD ARSGKYTGKEVNELFENYMQISGGISYEEIEGSDKVKVHVEDYLKHDGVRQLYSNIYDYY IEDKKDVADYENFSSDAQRKWLHPDQLSKEQLNIEIAGFEYPDSIYDATMENFINRYKSA SHEIDSNIPNTLFVEALYNLEFASLLILVIILANTFAMEKHYKTYQIMIPTAAGNKKITA AKLCAGILLALGIVLIQFLIVYIMSCMFLPLRGLNLTYYSQSQASLNITAYVFTYRTLIV NAMLLISIASMATAFITMLFSYIIKNRFATVIPLLLVTLISGFTGFFNQL >gi|312955264|gb|AENW01000043.1| GENE 208 221472 - 221663 97 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVHFTQFFKVALNPHLGEMLPYFSIRGYSLAWKNVIMLFWIVSIVIISLCMLQHSRRHVK NCS >gi|312955264|gb|AENW01000043.1| GENE 209 221767 - 221955 142 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIHLVTVYGVLYDNPDDPQALLLQESIQKEGLSSVVERITGFPKTHELHHAILQHYESLK RN >gi|312955264|gb|AENW01000043.1| GENE 210 222259 - 223512 1340 417 aa, chain - ## HITS:1 COG:ECs3807 KEGG:ns NR:ns ## COG: ECs3807 COG1063 # Protein_GI_number: 15833061 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 417 1 418 425 558 62.0 1e-159 MLAKAAVLCGKNTIQVRELELPPIGDDELLVKNISNSICLSTYKAALLGEDHKRVPDNIS ERPPITGHEFTGIIMEVGNHLKDRFQPGEKFVLQPAMGLPSGYSAGYSYEYFGGNATYCI IPKIAIDLGCVLPYQGNYFANASLSEPMSCIIGAYHATYHTKQYVYEHFMGVKEQGKLAL MGCAGPMGIGAIDYAVNGPVSSKLIVVTDIDEQRLERARTLIPEEAAKKQGKTLIYINTK DIDAVSELRKLSRGTGFDDVFVFAAVPALLKQADAVLGNDGCLNFFAGPTDKQFAVPFNF YNVHYEGTHIVGTSGGSTQDMLECLTLSAENRLNPSYMITHIGGLQAAPETILNLPNIPG GKKLIYPHIDLPLTAIENFRSRQSENPLFKTLADICERNHNVWCEEAETYLLEYYQV >gi|312955264|gb|AENW01000043.1| GENE 211 223529 - 224929 1518 466 aa, chain - ## HITS:1 COG:ECs3808 KEGG:ns NR:ns ## COG: ECs3808 COG2213 # Protein_GI_number: 15833062 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 3 462 7 457 462 528 59.0 1e-150 MNRAKLQAFGGFLTAMVIPNMGAFIAWGFITALFIPTGWIPNEGFNELVAPMVKYMLPMM LAYSGGKLVHGERGAIAGCVGTFGLIVGSEVNMFLGAMIMGPLSAWCVKQFDRLIDGKIP AGFEMVVNNFSLGIIAMILSLCSYAAIGPVIEFANEMITSMITSLVKTGFLPLLSVVNEP AKVLFLNNVIDQGVYYPLGMQQAAEAGKSIFFMVASNPGAGLGLLLAFSFFGKGNSKKTA PGAIIIHFLGGIHEIYFPYVLMKPLMIFPMIIGSACGIMVFEFFGAGLVAGPSPGSIFAY LALTPRGNFIGILAGVVTATVISFLLASLILKTSKDNGDEKLEKSIEKSKAMKQEGKDLL ASSLQTEAEALKDIAYIAFACDAGLGSSALGATAFKKRLQKIGVEKTVRNYAIEKVPDEA DVIVTHISLLDRARLKFPNRRIITIQNFMNDPNLDALFEEISNTEN >gi|312955264|gb|AENW01000043.1| GENE 212 224926 - 225108 91 60 aa, chain - ## HITS:1 COG:yggC KEGG:ns NR:ns ## COG: yggC COG1072 # Protein_GI_number: 16130829 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli K12 # 1 54 180 233 237 62 51.0 3e-10 MLKQRLIERKIQGGLSRSEAIAFYERSDGRNVSRVLQHSMQADLTLRLSQDMRFCKEEIK >gi|312955264|gb|AENW01000043.1| GENE 213 225312 - 225677 375 121 aa, chain - ## HITS:1 COG:ECs3804 KEGG:ns NR:ns ## COG: ECs3804 COG1072 # Protein_GI_number: 15833058 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 # 8 119 5 108 237 93 42.0 8e-20 MSRVTYPLVINGFTISADYEQEDVETIFLPLLRKLSEFQKEKKRRLLVFLAAPPAVGKST LARVLAHLSRADEQLCEIQDIGLDGFHYPQRYLDSHTMLKDGIRIPLRDVKGCPETFDIK N >gi|312955264|gb|AENW01000043.1| GENE 214 225674 - 226102 480 142 aa, chain - ## HITS:1 COG:lin2929 KEGG:ns NR:ns ## COG: lin2929 COG1762 # Protein_GI_number: 16801988 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 15 131 16 134 148 103 45.0 7e-23 MITDLLGKHIRTAEKAEDWKDAIRMAAAPLLENGSIRASYIDAMIHNVEVNGPYIVIMPD VAMPHSRVEDGALKTDISILKLKDGVAFPQDNIVHLIIALSANDNDAHMQLLSDMVDVFM DEDKMNGLLHAECVEDIRRVLA >gi|312955264|gb|AENW01000043.1| GENE 215 226296 - 228326 1371 676 aa, chain + ## HITS:1 COG:lin2801_1 KEGG:ns NR:ns ## COG: lin2801_1 COG3711 # Protein_GI_number: 16801862 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 5 514 7 528 544 119 23.0 3e-26 MLSDKDIELLSLLYNKEAPMSIKDLSDYFSVSERSIRYYVNNLNYELKEHGISIIKKICT LQDRSYVESFLQEKRPQLYSGDTKKKFMLYTLCFEGSINLSAVSRNLDISRSSAKSYMDD IRTTLTKYHLELLQEHKKGLVLNGSEGNIRKLLLQLLMEYEKLPETQQKILIEILYHWRT DLAEEQIHNFLHVIQKELGFVLSDHSYSIMFYSCLIILARTAEQQTLLSCDNEYFLITCP EYKVIEANKELLKQDLNRYETMQLSSLLIGSNYAQNSNLRENEWFEHDLLVSKIINLYSK YYQLNLNQDRTLYESLLTHLRPTMYRLLNHIPVSDMDYRLIQQQFPKEYEVMKQVLTELN FFTGEHQDQDETALLTLHFKAAINRCEKNNSKKKNILIICSHGYGTSRLLEQQLSDTYEV NVLDCIPYHYLKQYELLHQVDMIVTTINTLKYCNDLPILHVHPVLSSEDIQLLDEQLLVK RKKRVRMTAILEAVKKSCTIHDYAELKKNLSEALQDLLIRDDGRDQTLLDILPAENILLN YPAENWRDAIRTAGGLLVENGYVDQRYQEQMLYSFENYGSYMIIDDGIAIPHAKNEGTVR KTGMTLLILKKPVEFINGKKLQVFFSFCSKDNIEHLDALVAVANLIKETDFRQCIKRFHN SLEIVQFIKTHTQESI >gi|312955264|gb|AENW01000043.1| GENE 216 228494 - 229918 1396 474 aa, chain - ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 4 474 7 481 483 484 49.0 1e-136 MSVFPEDFLWGGASAAVQMEGAYLEDGKGLNVADIQICYKKAAGGGNTNYTRELLKQRIA DVQAEKQQQYYPKHKAVDFYHRYKEYIGWMKECGFKAFRMSISWARIFPNADDEYPNEAG LRFYDEVFDELHRQGIEPIVTLTHYDMPLKVVTHYQGWYGRKTIDLYERFAQTCLKRYKD KVTYWIVINQINLIFGESFSSLGMVMDEYEDFTAAKYQAVHHEFVASAGIVKAARELDPA LKVGMMLADQLTYAKTCDPQNVKIAIEKNRMKDFFFADVQLRGEYPGYAKTWFKKHGITI QMEDGDEELIRSYTMDFLAVAYYYSHCVDENGNRCANPYTKATEWGWTIDPVGLYNTMAQ YWDRYGVPMMIAENGVGVEEALGSDGCIHDEYRIDYQKRHIQELKDVMEEGTDIFAYTMW SPFDIVSGNSCEMEKRYGLIYVDIDNEGNGTGKCIPKDSFYWYARLIKSNAENL >gi|312955264|gb|AENW01000043.1| GENE 217 229918 - 230265 476 115 aa, chain - ## HITS:1 COG:lin0917 KEGG:ns NR:ns ## COG: lin0917 COG1447 # Protein_GI_number: 16799988 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 2 111 10 116 116 63 42.0 1e-10 MTDENNELILSAMGILTHAGDARLHTKEALKYVQALQFEKADACLKEAKKEITQAHAAQT EIIQAEARGVQYEYCMLFNHAQDTLMTINSEIELCSSLIDTFRSFAAMFVKKEES >gi|312955264|gb|AENW01000043.1| GENE 218 230258 - 231499 1367 413 aa, chain - ## HITS:1 COG:lin2459 KEGG:ns NR:ns ## COG: lin2459 COG1455 # Protein_GI_number: 16801521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 25 406 25 419 433 150 30.0 4e-36 MNTFINWLGSSFAPKVAKAMDKKIIRTLSGALMANVPILLLGSIISIYNLLAGYVSFLPD LSPVYNFSFGIMSLTLVFLVGYHGAKEYGFKEYGVSTGLIALMMFFMVIKPSIADFQFQV AFGRFGGSGMISAFFAGIVTIVISNLYFKLHLFEDSVSLPDFLIRWLNQVIPGIIVLVLT TILIYWCNIDLFELITKLFSPLISIGQTYPGFMLCIFIPVFFYSFGINSWFMNPITSPIG LAGITANAAAFEQGLQPTNIYTSNVTFSVIFIGGMGMTLALNIMMLKSRSKRIRKFGQIA MIPSLFNINEPLVYGAPIALNPILMIPMWINALVLPTIAWFAFSSGLVTIPHAVMNVNQL PMPICSFLATHGDFRAVILVVGMFLLSWLIWWPFFKAHENKMVKEEMEMEAND >gi|312955264|gb|AENW01000043.1| GENE 219 231504 - 231824 505 106 aa, chain - ## HITS:1 COG:SP0249 KEGG:ns NR:ns ## COG: SP0249 COG1440 # Protein_GI_number: 15900184 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 4 102 2 100 102 75 40.0 2e-14 MEKLNILLCCGAGMSSGFLAQQMRGAAKKQGIMAKVEAKSQNNIADDLPKTDILLIGPHL SYAFDELKAMCDPYAVPVLMIPKDMYAGLDGKGLLALCMETLKEKG >gi|312955264|gb|AENW01000043.1| GENE 220 232015 - 233895 1230 626 aa, chain + ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 497 1 498 505 173 25.0 9e-43 MKKKHEELVHIIRQQKQPISSTQLARLLNVTPRSVKNYVAAIQEEFPDLIAAGPRGYRID TDTHVKAESDIPQTYQERSSYIIRQFFIDHAQEIDLYDLCDELYLSYSSIKGLLNRMNKE YQDTGITFRCRNDMIYADGEERHKRKFLTDIIYQESSERFVDLQTLKDIFPDLNVQQIHD ILHETFKKHSCYINDFGYTNLTLHLAILLDRMQSGNTIEHSQKEQPELSEITVSVIDELE KSFHVALLDPERCDIHNLVTTSINLCHAESRQELITVVGQDIYEITQTVISSVNRQYGLQ LDKDTLLYPLALHFKNLFARCKRNTSLRNPLLESIQASCPMLFDCAIYVANYLEASCNLH ITADETAYLAMHIGADIERQSSDSGKLKCVLLCPDYQNSRQEIYNYLLIHFDSEICISAA CSYEAQLPDTAIDLLFTTIPVQKEYPHMLMIPPLKKAMDLKQIFEKIQEVMDQKKLHILS ESFSDFFHESLFYLHTDAGLKKEQIIRILHDKLYAQGYTSPSFYEDVIKREEAASTAFGC IAVPHSMKMDARRTGIALALSKQGITWDKQIVHVVLLIAIHEQESHLFRKLYEALILLFS QKHVPDQIKECISFQEFRQLLLTLTD >gi|312955264|gb|AENW01000043.1| GENE 221 234209 - 234967 782 252 aa, chain + ## HITS:1 COG:BH0826 KEGG:ns NR:ns ## COG: BH0826 COG1349 # Protein_GI_number: 15613389 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 227 1 221 251 115 33.0 7e-26 MLSAERKLYILKKLESEQTIQVKQVAKELHVSESSIRRDLLELDDENKVDRIYGGAVKKE RERILTDEAEIKMMERMSIHYDKKLRICKAASTLVEDGECVFLDGGTSIVPMIHFLSSRP IKIVTNNHLIVQNVQNPKAKIIVIGGEFNTKYRMSEGNEAQNMLRLYNFDRAFIGCAGVS LGMKKAFTAEMATRELKRIAMELSNHNYLLIDDSKLHVKGFCTFAQLDEFEDVFINRTTG METLPDHFIAVK >gi|312955264|gb|AENW01000043.1| GENE 222 235354 - 236244 1163 296 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 2 296 4 277 277 330 59.0 2e-90 MKKLSKKVLSKSFWRWFYGNLTCFSHEHMQTFGYMWSMLPIVQELYDSKDEQAEKLKTYY PFFNTEPQIGSIVVGITAGLEEARANGAEEIDDEMINGIRAGLMGPLAGIGDSLIVGTYI PVLLGIALGLSEGGSLIGPLFYIIVWNITSILFQKWIYGKGYELGGSAVEVIVGEQATAL RESVIVMGQVIVGAMAGTWVSITTAVQLTTSIQNKTEMVIEGSKVIEKVTGTQEVPVLLQ EKLDGAFPGVLTLLFVMGCWWLMAKKGISPIKIMLLMVVIAVAGVLVGFFDPGLSY >gi|312955264|gb|AENW01000043.1| GENE 223 236246 - 237076 898 276 aa, chain - ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 2 276 3 281 281 240 53.0 2e-63 MITWVQAALLGLMSCTAASIPAALGTTIGNYTLNRPLIASLFVGLTLGDVEGCIKLAIPM QIIYIAVVTPGGTVAADLRAVSYIGIPLAYATAKSQGLDLGGPEALGLAGSIGALVGTVG TVQFYGTAMMNLVWQHIGWARLDKKDFGIITKVNVILPLISHILVSFIPVMLITYYGAGA VTDFKTALPMDSWYMKSLFTIGSLLPAVGIAILLKSVVSKATDLIFFLFGFTVAASMHLT LIAATAVGAVFALINYQMTMIRLRGAKTNTNEEEDI >gi|312955264|gb|AENW01000043.1| GENE 224 237774 - 238505 739 243 aa, chain - ## HITS:1 COG:lin2103 KEGG:ns NR:ns ## COG: lin2103 COG0274 # Protein_GI_number: 16801169 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Listeria innocua # 15 243 3 223 223 139 38.0 6e-33 MKPTKKACEMTTKELAQYIDYSVLKPEFTEEDIIALTKDGVELGCATICINPGYMDLCEP YVKGSETMLCPVCDFPFGTSSTESKVKQIEIVAKYDTVKEVDIVANFGLIRSGKFDEVTK DLKACADAAHKYGREIKVIFETDALNEEQVRKACKCCIDAGADFVKTSTGFLTGFESHGA TPEIIKVMMEEVDGKCKVKGSGCIRTREHFLQLIDMGIDRMGVGYKSVPVVLGLDNKVST DNY >gi|312955264|gb|AENW01000043.1| GENE 225 238890 - 239429 519 179 aa, chain - ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 1 179 1 179 179 211 67.0 4e-55 MELKGSKTEQNLMAAFAGESQARNKYTYYAQMAREEGMEQIADIFEETARNEQEHAKLWF KALHEDKVPTTAVNLEDAAAGENYEWTDMYKGFAETAKEEGFAKIAFQMEQVAKIEKHHE ERYLKLLENVKNGKVFEKDEATVWVCDICGYRHEGTAAPKACPVCGYSGAHFAEEAKNY >gi|312955264|gb|AENW01000043.1| GENE 226 239466 - 239885 251 139 aa, chain - ## HITS:1 COG:Cj0400 KEGG:ns NR:ns ## COG: Cj0400 COG0735 # Protein_GI_number: 15791767 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Campylobacter jejuni # 8 128 25 148 157 72 32.0 2e-13 MEVDMIRKSSKQRDMILNYMKQIDGHVTPEQVFQEMNAGGQKISLATIYRNLNILCEMHE VKKIAHPIDGYQYDKTCKPHYHLHCIKCDRILDLDIPYLESFNEEMSKQTGLPIKTHNMM AEGICQDCLKKQNGMDQEH >gi|312955264|gb|AENW01000043.1| GENE 227 239990 - 240478 747 162 aa, chain - ## HITS:1 COG:BS_yacN KEGG:ns NR:ns ## COG: BS_yacN COG0245 # Protein_GI_number: 16077159 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Bacillus subtilis # 1 157 1 157 158 188 56.0 4e-48 MIRIGQSTDIHQLVKGRKLILGGVEIEHEMGLLGHSDADALLHAIAESILGALALGDLGK HFPDTDERYKDMNSLWMLRQVYKIMEEKGYAIGNLDAMIMIERPKMAPHIPAMRKHVAEA LCCDMEQVSIKATRGEKLGFVGREEGVQAQCVVLLHKKEGIA >gi|312955264|gb|AENW01000043.1| GENE 228 240674 - 241435 1012 253 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399819|ref|ZP_06643965.1| ## NR: gi|293399819|ref|ZP_06643965.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 249 1 258 261 139 38.0 1e-31 MKKLAALVLSFGMLFSMAACSGSKVSDDALDKLESSVKKFSEVKNANYSADMDMTVDKEN AKIKLYGGFISETKKPLQLSMIMDMEASGQKLEKYMQLFVKDDTMYLNMMDMMKQKTSLK DAMGTASIPNVNFDADTFKMNKEDMKKFLKEASVKGNDLKLSFDVEKLNEETKKETEKNN VTDANVEFKKLDMDVTLNNDFMEKAVITMEMTNTKGETKQEMNGTISLTVKDINKVSSID FPDFKDYKEGSIE >gi|312955264|gb|AENW01000043.1| GENE 229 241502 - 242353 918 283 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399820|ref|ZP_06643966.1| ## NR: gi|293399820|ref|ZP_06643966.1| hypothetical protein HMPREF0863_00103 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 264 6 254 272 103 31.0 1e-20 MKKILAILTCALMGFTLAACSSKNKINEDALDAYAKAATNITKMKSAAYDMKLLVDADDM DMHAKVTMDGTYNAEKKLQLALHMDAAVNGIGLDDLASFYMKDDVVYANIMEMEKEYNEL DDQLLNKLKLDKETGDPKKNVEKSFEEMTMEEKDGRKVITAVMNKDGLSAAKDYANKSID DDTFKLGNGIKVTGIREGSYIFTVNNQNQFERIEMKVAASYELDDEDEKKKAVDMTISLV VNLNDINQVNKIDFPSFKDYKKADSRKSEANDLLNELSNENAL >gi|312955264|gb|AENW01000043.1| GENE 230 242537 - 243100 807 187 aa, chain + ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 1 186 1 185 187 142 52.0 3e-34 MSLFSIFMIGIGLSMDAFAVSIARGMTMKKEDLLRYALTLGFFFGVFQAVMPLIGWWAGS YFQEFIASIDHWIAFGLLAIIGGNMIRESLRGEEEACEDKSLTLKTILILAVATSIDALA VGISFAFLQVHIWTAITVIGVTTFVLSFIAVYLGNRLGDLLEKYAGILGGIILILIGTKI LLEHLFG >gi|312955264|gb|AENW01000043.1| GENE 231 243172 - 244437 1339 421 aa, chain + ## HITS:1 COG:BH1257 KEGG:ns NR:ns ## COG: BH1257 COG2256 # Protein_GI_number: 15613820 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Bacillus halodurans # 2 405 3 421 428 382 50.0 1e-106 MKQPLAFRMRPQHLDDIIGQQHLIGEGKVLRRCVLEKRLFSMIFYGPPGTGKTTLAMVLA NELELPFRMFNAVTGNKKDLETIFQEAKFYEGLIVIIDEVHRLNKDKQDLLLPHVENGNI TLIGATTSNPLHAINPAIRSRCHLFEIKQAQQEDIEQALMKAIHHQDGLNDSVQIEEEAL HIIARHSNGDIRYSLNILEICALASDGVITQELVSQYSQFPNMSMDSDGDGYYDVLSGFQ KSIRGSDVDAALYYLGIMIEANDMDSIERRLLVTAYEDIGLGNPAAVARCATAIDAAKRV GFPEARIILAVAVIDLTLSPKSKSAEHAIDAAMSTLRHTSYSVPDYLRFTPVNMDDDEKY DYERSDLWNRIQYLPDRLKNKHFYEPELTSSYEKILAQNLEKLRKVPRTSNLKALKKQSS R >gi|312955264|gb|AENW01000043.1| GENE 232 244763 - 245191 532 142 aa, chain - ## HITS:1 COG:no KEGG:TDE0191 NR:ns ## KEGG: TDE0191 # Name: not_defined # Def: acetyltransferase # Organism: T.denticola # Pathway: not_defined # 1 141 1 142 142 63 29.0 2e-09 MEFRRIKPEDYKDIHALNEKLGYSYDGDKVYERIISILETGSDFITVAEDEGRVVGYIHG SPYETLYSDKLVNIVALVVSDDYADNEEVRQIYDVFEARVRKNGYCGLRMTANVRRKNLF KLLSQHGFKSHSDLKHYLKYFD >gi|312955264|gb|AENW01000043.1| GENE 233 245397 - 246482 921 361 aa, chain + ## HITS:1 COG:CAC1550 KEGG:ns NR:ns ## COG: CAC1550 COG0229 # Protein_GI_number: 15894828 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Clostridium acetobutylicum # 213 357 2 146 146 187 58.0 2e-47 MVLLIFAAAGILLLFYLFTRKSEQPVQKVNIQADIQHDEEAEIFLAGGCFWGVQKFLSSL EGVRFTECGYANGTSDNPSYEDVCTKDTGFAECVHVLYDKNVLTLEELLNQFYTIIDPVS VNRQGNDTGSQYRTGIYYTNPKDADVIQQSLDKLQKSYDQPLAVEYQSLENFYSAETCHQ DYLDKHPDGYCHIPAWKFERKEAAEPHRFPLPEKQELKQRLSAEQFAVTQENATERPYRN AYWDTFEKGIYVDIVSGEPLFLSTDKFVSGCGWPSFTRPIQKDLIKEKSDISGGMRRTEV RSAHSDAHLGHVFDDGPQHCGGMRYCINSAALMFIPISEMEEKGYGDYLALIQQENQQSA E >gi|312955264|gb|AENW01000043.1| GENE 234 247011 - 247763 419 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] # 1 247 1 244 245 166 37 1e-39 MTQNIFDNDEFFSAYMDLRLHRKNYNDFMEQPKMQKLMPDSKGKAILDIGCGYGHNCLHF AENGAAHVTGIDISEKMLKEARRNYAHPVITYMRMDMAELGTLNNSYDLVYSSLAFHYAE DFPALVHDIYKLLRPGGILLFSQEHPIITATYDGKGHYNHDEHGDCISYTFSDYGREGKR SGFWYVDNVENYHRMMGTIITTLAHTGFFVEDMVETLPDEHALQECPGMIKEFIKPSFLI VRARKMTREM >gi|312955264|gb|AENW01000043.1| GENE 235 247760 - 248476 281 238 aa, chain - ## HITS:1 COG:no KEGG:Bmur_1780 NR:ns ## KEGG: Bmur_1780 # Name: not_defined # Def: hypothetical protein # Organism: B.murdochii # Pathway: not_defined # 1 233 5 240 240 189 44.0 1e-46 MKSTEEQLRKRGKASSDDIEELSSLEVKKRILLLSHEAAWIRSAAAISLKKDVEQAADEL LQQLEKEKCLYTRIAICETLEAGDQRTAEKMALYLGRIGTNQYKTVPETVSAKKSYPLPR DIIARCMGKMNPCTASVLVAVTEGDDKAKVSEALDAIGFMAFYHPDVASPQICDSLLQLA EKWKKDSLILWKLLLCMSAFSCEKSEAFVQAYAEKNGILKKQAERSRKIIEERRRSVK >gi|312955264|gb|AENW01000043.1| GENE 236 248522 - 249259 760 245 aa, chain - ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 6 231 10 235 243 99 28.0 6e-21 MKESKPKYLEIADAIHQEIRQEIYKQGDKLPVERELQERFGASRMTIRHALQKLEQQGVV RIDRGRGAFVMDLMIQRSKEILGVTELMERKGLKCHSKVLHLERIKPDEHIREAMNLKET DEVYFLHRIRYANDEAITVEYAHINALYCPGLEMFNFESFSLYDVFYEHYHLDLSWARDD IRADSIRGEDAHILLQAKSGPALIVYNTAYDLNNNPIEYTKTIYNYKMFTYTVVSTETSK KYKNK >gi|312955264|gb|AENW01000043.1| GENE 237 249474 - 250319 543 281 aa, chain - ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 281 53 332 332 243 45.0 2e-64 MEYLEKGEIDSDIKATCELQLEAYERWNGHRGFGPLNARQAMERACELAKQYGIGMVALA NNNHWMRGGSYGLQAADAGCIGICWSNTKPNMPAWGGENQRIGNNPLVFAIPRSNGQHVV IDCAMSQFSCGKIEDYRLKGLQLPVPGGYDTSGQITRDPGEIYKTKRVLPMGFWKGSGIS IALDMIASVLTAENAVHTIGTFEDEIGLSQMMIAIDPSKANTEEQTDAIVDGILAYIKAS KPIDEARPVLYPGEPEWRTMEEHRKNGIPVIEEKWNKVLAM >gi|312955264|gb|AENW01000043.1| GENE 238 250292 - 250462 171 56 aa, chain - ## HITS:1 COG:PM1256 KEGG:ns NR:ns ## COG: PM1256 COG2055 # Protein_GI_number: 15603121 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Pasteurella multocida # 1 49 1 49 332 59 53.0 1e-09 MRVSYDTMLQEFKRVLMKKGFQEDRAEAAAAIFAQNSLAGVYSHGLNRWSIWRREK >gi|312955264|gb|AENW01000043.1| GENE 239 250573 - 251355 739 260 aa, chain - ## HITS:1 COG:yfaU KEGG:ns NR:ns ## COG: yfaU COG3836 # Protein_GI_number: 16130180 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli K12 # 3 240 7 233 267 62 26.0 9e-10 MINQLRKKLMEKEVIVATRIDFTWPQLIEIIGSNELYDYVEFLAEYAPFDHYDLENMARA AELHNISMIIKPDYHNRIYVAQKAMASGFEGILFTDHTTAAEVRETIRQITPATPDGGAL GFVNRRWIRNANLSSQMDYARDVCDIVKGFMIEKVEAVHNLEEICQVEEVDFLQFGPADF SMNSGFDKSVHPDEVKEVEKYVIETALRYGKRIRVEIRNAADAAYYYELGVRDFALGTDL RILKDFYKNEGDQLKEIIMG >gi|312955264|gb|AENW01000043.1| GENE 240 251352 - 252551 1048 399 aa, chain - ## HITS:1 COG:BS_yxaA KEGG:ns NR:ns ## COG: BS_yxaA COG1929 # Protein_GI_number: 16081056 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus subtilis # 1 372 1 375 382 160 31.0 5e-39 MNVLIAMDSFKGALSSERAGKALERGILRTSGHQTTVCSVADGGEGSVHALAACVKGEYR TWQCRDAFHQRITVRTLLFKEGESLCCAVEAADIFGLHNCEVSSATAATASTYGLGELLN QLHGHAIHKVLLFLGGTITTDGGLGVMQGLGIRLYDQMGNVLPDDCNPLFAFDHWDEEAF QTVRKKLGDMKLLVGCDVCAPLYGKEGCVLTYSAQKGANAMQMNKLEQQLHLLEQRSARN LMQEGCGAGGGCAAGLYILGAELTFGYELINRYVRLEQRLHTADLVITGEGQMNHQTLQG KLPIRIAQAAKKEGIPVLAVCGQREVDCIALTTYFQGIFTIQQGIYPLHEALAHTEEYLE ETGYQLMRLITMTAGISHTVLKNQKVTIAEELCRKGKTI >gi|312955264|gb|AENW01000043.1| GENE 241 252674 - 253780 1016 368 aa, chain + ## HITS:1 COG:BH2731 KEGG:ns NR:ns ## COG: BH2731 COG3835 # Protein_GI_number: 15615294 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Bacillus halodurans # 3 360 2 366 371 118 25.0 2e-26 MKISEELAKIIVDNIHEVIPEEINFINADGLIIASTDPKRMHRLHTGALSVIRNREQLSV QNDTQYYGARKGINMPVFFDDEIIGVIGITGEEQDVIGYAKILQKMTQILVKDAYYRDIR HQKRSSDRILIERVLSGNFENESLFQNDNLTQRSPRLIVCAKIDGQLKDEQIDRIHRLLE AVPFSTYIEKKALYVQELIFIIPAQNRMYIQQWIGSIREICPHAIFWGIGTVTEKISDLP LSYSRAKTAALWGSGISGHRVSCYEDIGVGMLLPHIDELERAYFLKHLFKDCSAERIAEI MMVLSLYEEHNGSILHCAKACNMHRNSFQYKLLQIRKQTGLDPRSLHDYVLLKLAVVLYQ FQQNTPHS >gi|312955264|gb|AENW01000043.1| GENE 242 253950 - 254297 143 115 aa, chain - ## HITS:1 COG:no KEGG:MYPE4220 NR:ns ## KEGG: MYPE4220 # Name: not_defined # Def: hypothetical protein # Organism: M.penetrans # Pathway: not_defined # 16 115 317 418 418 80 43.0 2e-14 MNYPETLRISNLSGAFFETFVVNEIRKTFLNNKEPFHAYYYRDSKQNEIDLVLLYKGRLS LIEIKQGVSFQASDAKGFDQLKSSLYQIENRIILCNTLENYPINRDVQAVALNSI >gi|312955264|gb|AENW01000043.1| GENE 243 254402 - 255178 470 258 aa, chain - ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 253 3 251 411 103 28.0 4e-22 MLKRAIKPHVVKALDMYPVVILTGSRQVGKSTLAYEFVKEKGFAYVSLDNIDQRKLAISD PKYFLQQFDTPLIIEEVQYAPVLFEVIEEIVNRKRLETGNANGMYLLTGSQAFHLMKNVT QSLAGRASVIQMVPLGLDEILGRETLPFVPSKDRIAMYQKSIKISVKDVFELITKGMYPE LYRTDQAVPDYYENYVNTYIDRDISELIHLKDKLKFHDFLQYLAALTGQQINASDLSRKL QVSSNTIQHWLSIWNLPV >gi|312955264|gb|AENW01000043.1| GENE 244 255405 - 256271 964 288 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 287 1 286 299 292 51.0 6e-79 MLMNMKDLLAVAQKNHFAIPAFNIGSDQLLKVVMKKVKELNSPVILEMSPDEFNFVGDAQ IQAMIYEAAQTDVPVCIHLDHGDSYETAVRAIRAGMTSVMIDASTLPYEENVAVTKKVVE TAHIANVSVESELGTIGTTGNSIEGGTQGVIYTVPEEAKQFIEDTGIDTFAVAIGTAHGI YPKDMKPELRIDILKDITSKVDVPLVLHGGSSNKDEEIAAAVDNGICKINISSDIKVAFY TQCRKTLNENPGYREPLEIYPEAMEVCGKVVEEKIRLFKSNDKVKYYY >gi|312955264|gb|AENW01000043.1| GENE 245 256292 - 257146 939 284 aa, chain - ## HITS:1 COG:lin2239 KEGG:ns NR:ns ## COG: lin2239 COG0191 # Protein_GI_number: 16801304 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 284 1 284 284 340 58.0 1e-93 MYVSMKGMLQRANEGNYAVMAINCFNIETARAVISAAQDLRAPIIVNIVQEHMVNHCDSE LIAPIVKLLAQRASVEVALNFDHGEEIGYLKKALHDGYSSVMVDASRYDLEGNIKMTKEI VEFARQFDASVEGEIGCMGGSEGGNYTNDAMKTDPQQALRFAKETGIDALAISFGSSHGN YPEGYVPEFDFERLKEIKELTKMPLVLHGGSGSGDKNIENCVKYGINKINVGCDFMNANV DSIKKHLEKDPNINYWVMMHQVEIDSREIIRHYIRLSKSEGKSL >gi|312955264|gb|AENW01000043.1| GENE 246 257165 - 258253 1255 362 aa, chain - ## HITS:1 COG:lin2240 KEGG:ns NR:ns ## COG: lin2240 COG1299 # Protein_GI_number: 16801305 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Listeria innocua # 1 362 1 363 363 390 61.0 1e-108 MKKFGAELKRHALTAISYMLPLVVASGLLIAIGNLMGGEVVTDLSKMTIPSALTSLGVLG MGLLPSFIAGYISYSIADRPGIAPGFLMGQIASFLGAGFLGGMVGGYIVGYIALFIRKHL KVPHWAEALMPMMIIPTLSSIIAGLLMYFVIGTPIVWLTEGLTNFITGLDQSSKVLYGFI IGALGCLDFGGPISKVPNLICDGLLLEGILEPEAIKVLAAMVPPLGITLSLVISKFIKKR IYTSTEVENIKVAFPMGLCMISEGVIPIAMNDLIRTVICTSIGCGVTGAISFTLGVGSAV PSGGVFVIPAMTNPFAALLALLAGTCVTAVLLVLIKKKRTDADEVQVEEVEEEMDLSGIT FS >gi|312955264|gb|AENW01000043.1| GENE 247 258275 - 258586 500 103 aa, chain - ## HITS:1 COG:lin2241 KEGG:ns NR:ns ## COG: lin2241 COG1445 # Protein_GI_number: 16801306 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Listeria innocua # 1 102 1 102 103 125 66.0 2e-29 MNIVAVAACTSGIAHTYIAKEKLIRAAEGMGHTIHVETQGTIGTEDELTAEQIKAADVVI LAIDIAITGTERFEGKKTVKVPTNVCVKAPKQLIQKIEAELNK >gi|312955264|gb|AENW01000043.1| GENE 248 258721 - 259176 770 151 aa, chain - ## HITS:1 COG:SP1619 KEGG:ns NR:ns ## COG: SP1619 COG1762 # Protein_GI_number: 15901456 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 148 1 148 149 127 45.0 9e-30 MQLIDVLDERIIDLNAEAANKEEVLTLLAGKLKDAGYIADVEAFKKDIYLRESEGTTGIG NYIAIPHGKSDSVTQVGIAIAKLKHEIEWETLDDKGVRLVFLFAVSNDHEYARNHMLLLA DIARKLGNDEAVERLLQVENVEELKEIFAGK >gi|312955264|gb|AENW01000043.1| GENE 249 259251 - 261215 2278 654 aa, chain - ## HITS:1 COG:BS_yjdC_1 KEGG:ns NR:ns ## COG: BS_yjdC_1 COG3711 # Protein_GI_number: 16078265 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 11 496 9 495 510 142 23.0 2e-33 MKSEKENYYIKEILKILVQGDIVATGKIASMIALSEKATRNKLEHLQNYLQENQLGSIEK KPRVGIWLNMDEQQKEKMLRLLDGAEHFSVGYDATQRVRETLQIFFRMMPRETITTQKLA EELYLSPPTVLKVMKDCEKWLAPYGIEINNERSRGCSLKYDETSYRIALKDYIMLDHDLD ETRRQTQDFFSSIDIDLIKKAIIETENEWNYRFTDTSFYEILIYCCLAYQRKDFSTPLRI AQEDQEILERYNEYPFTIAIFKKLHEKMHVIFSNEDVMFLATQILCSKFIGINNAVDMIS NISKYDQKILNFIDEMLVTIGNILEVDLTNDSKLRESLIFHMRPTIFRLRYGSPQSNSLV NFIKTEYKTVFRAAWSISMMFENTFGLQITEDELGYIVLYIQSALERRNQRYSAILLAES NLGHAQLLSERIRKTVPEISSLKVISHHDFKLYEHPDEDIIISSKLLKETDRRIIVIPNL LSDTGIGMLRSFMDNLNLRVSEEINPFEPICFQLFSPELMFINTSFDTKEELLKYMCERM ELKGYVTGKFYDSVMEREKATTTSIGNRVALPHGAMSEVNESHVAIAVLPEPIVWDDDRV DVIFLLGFKMSTHEEIRRIQSFYKQYISLIETDEKVKIIRSKKSNLELYRYLIQ >gi|312955264|gb|AENW01000043.1| GENE 250 261240 - 262130 322 296 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 4 292 6 313 323 128 29 2e-28 MYTAGIDIGGTNTRIALIDEAYEIIQRIQFPTDVNNPHATLQKIQETVQSFSVAIAGVGL SCPGPLDLKQGIILDTPNLKGGWHGLAVSKELSARLKVPVFLENDANLACLAEAVLGQGK DYSYVQFLTISTGLGSGLVIDKKIYQGAHGFAHEIANIPLWRNGPSHGSIYPGGVEAICS GTAITTRAKKAGLDVEHAGDVYSLACSQNQTAIDIMEDAKEYLANTIAIIYAFVDPEIVI LGGSVAIKIPGFVEDVEQRVKTKVYPNIQPLVKVVKTNLSEDSGLLGAACLAFLQV >gi|312955264|gb|AENW01000043.1| GENE 251 262331 - 263803 1338 490 aa, chain - ## HITS:1 COG:CAC1405 KEGG:ns NR:ns ## COG: CAC1405 COG2723 # Protein_GI_number: 15894684 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 8 490 7 473 473 543 56.0 1e-154 MNNFPKNFLWGGATAANQCEGGWNAGGRGPARTDITTAGTADTARMLTYRMPDGTTGAVS QFEGIPEGGKGAVLDGYYYPNQEGIDFYHRYKEDIALFAEMGFKMFRMSISWSRIFPQGI EHEPNQDGLDFYRNVFMELKKFHIEPLVTISHYDTPLYLEEEEGGWNERKMIAYFDRYTE VIFKEYKGLVKYWLTFNEINCLIMMKDWMPNATREMVSSYYQQLHYQFVASARAVQRAHE TDPDYQVGCMLAGMCNYPLTCDPKDILKTQKKMQDAFYYCGDVMVRGKYPAYAKRIWKED YVELDCTLKDMQQLEKGTVDFFTFSYYGTSCVTTHEGVEKDGAGNLSLGVKNKYIQYTDW GWGMDPDGLQYFLNDIYDRYEIPVMVVENGLGAIDTLEEDGSIHDPYRIDYLREHIRAMH AALKDGVDLRGYTPWGCIDLISASTGEMKKRYGFIYVDLDNEGNGTKNRYKKDSFYWYKK VIASNGEDLE >gi|312955264|gb|AENW01000043.1| GENE 252 263821 - 264018 306 65 aa, chain - ## HITS:1 COG:CAP0010 KEGG:ns NR:ns ## COG: CAP0010 COG2723 # Protein_GI_number: 15004715 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 2 63 412 469 469 83 61.0 1e-16 MGYCPWSAIDLVSTREGISKRYGFVYVDRNEDDNAAKTAEMKRYRKDSFYWYQQVIASNG AKLEE >gi|312955264|gb|AENW01000043.1| GENE 253 264085 - 265260 818 391 aa, chain - ## HITS:1 COG:CAP0010 KEGG:ns NR:ns ## COG: CAP0010 COG2723 # Protein_GI_number: 15004715 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 3 390 9 386 469 353 47.0 5e-97 MAFPEGFLWGGSSSSAQVEGGYDCDGRGLSIWDVKQLNEGTCSFHYASDFFHHWKEDIAL MAEMGFKAYRMSISWSRILPDGENEINQKGIDFYKAVFAECRKYDIEPIVTIFHFDLPLA LEKKYGNWNNRRMMDAYVAYCRVLFSEFKEDVTYWLTYNEQNMLIFFGAVDMTGGSGRVQ NLDALYNQAHVQLVAQAKAIHLCHELCPDAKIGPAPNITTSYPKSCNPIDYIAAMNMDDL RNNFYLDALVFGKYPESVNHYFELNDIQIRTEEGDFECMRTCHPDFIGFNCYGNDTTEYL PYFEIDYEAMLHADNREVSYLMKLMDKPGIGRAVQNEYLMNSEADGHSFDPYCIRITARR LTQRYHLPVLITENGYGREDILEADGSIHDS >gi|312955264|gb|AENW01000043.1| GENE 254 265272 - 265721 343 149 aa, chain - ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 21 130 25 160 464 77 38.0 1e-14 MRTNKEMVVMYMQDMTIKKGEDFKGFTTQELSADLNIQRTNLSAILNDCVKQGILEKSKQ RPVLYRLKEGKKEEKHLSCFSKLIGVNGSLKNAVQLAKAAILYPEDAMSTLIVGEQGTGK TLLTIIWYPFFKIYEKQCIEKEQAEALEA >gi|312955264|gb|AENW01000043.1| GENE 255 266061 - 267638 1653 525 aa, chain - ## HITS:1 COG:BH3557 KEGG:ns NR:ns ## COG: BH3557 COG0696 # Protein_GI_number: 15616119 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Bacillus halodurans # 1 524 1 510 510 326 39.0 8e-89 MSKRPVVLVVMDGVGISDSEFGNAVKKAYKPTLDNLWENSPHTEIKAHGLAVGLPTDDDM GNSEVGHNALGCGQIYSQGAKLVNENIETGEIFKTETWSGLVNNCKDGKMHFLGLLSDGN VHSHINHLKALIKKAKEDGVKEVRVHALLDGRDVPETSALTYVDDIEAYMAELNDDSFHA CIASGGGRMTITMDRYEANWAMVEQGWHVHVLGEGREFASAKEAIETYRAESGVVDQDLP GFVIAKDGKPVGTIEDGDSVILFNFRGDRAQEISLAFDGDDSFDKFDRVRMPKVMFAGML QYDADLNIPHNFLTYPPKIKYTLTEELCKHGIREYAISETQKFGHVTYFWNGNRSEKLDE KLEDYVEIKSDVIPFEQRPWMKSAEITDVLCAAIESGNYDFLRTNYPNGDMVGHTGNFEA TVIGVESVDLQLARVKKAVDAVNGILIVTADHGNADEMYEKKKKEDAPVKAKTSHTLNKV PFIIYGADVELKQDEQLGLSNVAATVADLLEVAPNEHWNESIIKK >gi|312955264|gb|AENW01000043.1| GENE 256 267741 - 268682 1048 313 aa, chain - ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 1 313 1 319 320 258 45.0 9e-69 MKKRTKVVIGIGISLLILVLGGLGFAGNYFYTLAIDAHSDKSVVFGNEEEDPKAAQASKD SYNEMMARDTKDVWMKNKDGYRLHAYEINQTGNKWVIVVHGYISEAKNMAEVANHFAEQG YRVLVPDLRSHGQSEGDSIGMGAWDSEDIVEWSKYILKQDSSASIALYGVSMGASTVMMA SGNEQLPDAVKVAVEDCGYTSAWDEFSFQLDDLFGLPSFPALDAANLVTKLRAGYDLKDA DALAAVKRKKVPMLFIHGDADDFVPTDMVYPLYKAAAGEKELMIVKGAGHGKSREADPLA YWEKVDTFLEKYI >gi|312955264|gb|AENW01000043.1| GENE 257 269033 - 269941 939 302 aa, chain + ## HITS:1 COG:no KEGG:LA_1827 NR:ns ## KEGG: LA_1827 # Name: not_defined # Def: hypothetical protein # Organism: L.interrogans # Pathway: not_defined # 11 259 9 264 289 65 23.0 2e-09 MSNTMHQLSYSNDLFFKYTLSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIILD VHVKDEQNRHFNIEMQTTYKGLAEMMRFEFYGARALNNQLNSGKKYRDLKPVYQIIFIDE YAWNNRNLINQYQMRNEQGEKESYYPLILRTYIHMPAINDIVREKEIQRLNDFEQLVYLF ENNGKNDILKSKERLVKVFMDKYEEMQKDDELWSTAMAIQMGEARYRYGLEDSFEEGKIE GEKIGIQKGRISLLLKLLKSKYHEDCSAWLLSLNDEQMEAVSSLILVCNSFQELKNQVTI MK >gi|312955264|gb|AENW01000043.1| GENE 258 270390 - 271007 713 205 aa, chain - ## HITS:1 COG:BS_ytaF KEGG:ns NR:ns ## COG: BS_ytaF COG1971 # Protein_GI_number: 16079959 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 1 156 1 159 159 59 29.0 3e-09 MWNAFLLVIALSLDSFLASLAYGGEHIRIPWKSAVLISLIGVLFLSFSLYTAAFIQQFIP PYICRMISFTIFFMIGLSSLFQGTIKSFLGTYKRKKLSFEYSGISFVLDIYLDETKADAD NSKLLSLKEALYLAVALSIDSLASGFALGISIVQPLSVLVISFCVGILAILGGSFLGSRV LSLKECRLSWVSGVLFLILAFSRIL >gi|312955264|gb|AENW01000043.1| GENE 259 271076 - 271642 495 188 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_3456 NR:ns ## KEGG: CDR20291_3456 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 181 1 179 180 139 50.0 4e-32 MKGFEREDQLFSLCGLNCGLCSMHLGGYCPGCGGGAGNQACAIARCAMQKEDTPMYCSAC SEFPCERYAEPDAYDSFITHRNRMQDFMRMHTIGAAAYHKEQLEKIEILKELLSDYNDGR RKTLFTLAVNLLELKELRGVMQRLSEVKTDTYTRKEKAELAASLLQEAAAKIPAELKLRK KPKQKSVG >gi|312955264|gb|AENW01000043.1| GENE 260 271900 - 272586 862 228 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399834|ref|ZP_06643980.1| ## NR: gi|293399834|ref|ZP_06643980.1| hypothetical protein HMPREF0863_00117 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 228 1 228 228 385 87.0 1e-106 MKGPGIKDYLEVIENMKVTAQKEGKAFIEVNSKELHANVSPNHATMPTCCQAIYKLMLEG DEILRRPKGNTGFGSHLTVRFYVEQLEERERMFPNKKRGRPAKSEEEKLAARKAKMKRNT EDLCNLIKSWLGEHGWEYIENKDFIEAHNESQRWVINVQGIKRGRKQTLPVKLSEVLKHI EDTNTHYSIAFNDSVSYRRQWNEIPKAVKNSLNMSVILADKKGNITEL >gi|312955264|gb|AENW01000043.1| GENE 261 272715 - 273761 1046 348 aa, chain + ## HITS:1 COG:alr4915 KEGG:ns NR:ns ## COG: alr4915 COG3440 # Protein_GI_number: 17232407 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Nostoc sp. PCC 7120 # 228 345 192 312 313 66 33.0 8e-11 MRKMLFKKILSILDAIELQGVSLHDAPLRVYEEIAGEYYAMKLSEIRDLIGFLNEKKMLK TTPRGIDLTPAATIYAKSNQNSGVEALSIFESFIKDPLIFRYYHEQMRTNPFRDKQLVLE YVDRESLQLMLQTTLFEVVEEKLRFHPRLLKGISDILQEYSDEKVPLVSITLTALYTSII VAHEDMRIDYKNTSYSMIDYKYKNIIHGIIPRKGIPHDRDETKALQVFYKDTLFHEFDHS CPICGINIPHMLIASHIKPFRDCAHIYEAIDHDNGLLLCRNHDYLFDQGYFTFDENGYII FSEELLEKDNLDSAYSLRKNYRLAECYLSENRMKFMAYHREFIFHRNR >gi|312955264|gb|AENW01000043.1| GENE 262 274017 - 274439 543 140 aa, chain + ## HITS:1 COG:MA0746 KEGG:ns NR:ns ## COG: MA0746 COG0607 # Protein_GI_number: 20089631 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Methanosarcina acetivorans str.C2A # 4 133 9 142 151 66 32.0 1e-11 MKKIALFTVFACIMVILQGCAKDMPTEENKEAVQENSNAYHKIDAKKAKEMMDAGKVTIV DVRTQQEYREKLIPDAVLVPNETIEDEAKDKLPDTDAVLIVHCRTGVRSKQASDKLVQMG YRNVYDFGGINDWPYDTVSE >gi|312955264|gb|AENW01000043.1| GENE 263 274444 - 274881 424 145 aa, chain + ## HITS:1 COG:SMc01160 KEGG:ns NR:ns ## COG: SMc01160 COG1959 # Protein_GI_number: 15964112 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Sinorhizobium meliloti # 2 145 4 148 152 73 35.0 9e-14 MNSEFIIALHALAYLRHRNTKVSSEELAKSICTNPARIRKVMAKLKKAGLLETREGNSGG YELHGDAAAIRLSDLAQALQQPLTKSGWRSGTLNTYCMIATGMGTVVDTLEASLNEVCMQ SLSQITIEDISQQLIAIENHKNKEE >gi|312955264|gb|AENW01000043.1| GENE 264 274885 - 275211 390 108 aa, chain + ## HITS:1 COG:BMEI2022 KEGG:ns NR:ns ## COG: BMEI2022 COG0526 # Protein_GI_number: 17988305 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Brucella melitensis # 1 104 1 107 107 76 35.0 1e-14 MALVTANNENFYELIEKEGTVVEFWAPWCGYCRRLSPVLKQIAGEYPDLTLVQVNIDDYE ELSDRYGVETIPCMMVFHDEKPSTPLIAPQAKAQVITWMKEQKAAGIE >gi|312955264|gb|AENW01000043.1| GENE 265 275228 - 276154 587 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 5 296 1 296 306 230 40 4e-59 MNKQIYDVAIIGGGPAGYSAALYCARSALSVLVLEKLSAGGQMATTGIVENYPGFEEGID GFDLGEKMQQQAERFGAKTVYAGVEGADLTAQPKLLHTDEGDMEAKTVIIATGAYPRELG LPNESSLRGRGVAYCAACDGMMYKGKDVIIVGGGNSAIADALYLEKICKSVTLIHRREEL RASKVYARQLENSTIRFVWNSRVKEILADKRVSGAVIENMKTKETQVIAAQGLFVAIGRI PDTAVFEGQLEVNKAGYIVADETTRTSIPGVFAIGDVRDKPLRQIVTAVSDGAVASKFVD EFLAGLPQ >gi|312955264|gb|AENW01000043.1| GENE 266 276209 - 277756 1599 515 aa, chain + ## HITS:1 COG:FN2009_2 KEGG:ns NR:ns ## COG: FN2009_2 COG1732 # Protein_GI_number: 19705305 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Fusobacterium nucleatum # 211 512 3 305 307 322 53.0 2e-87 MIQELFDFITQRWDFLLPLIYEHLQISAIAIVFATIVGVSIGILIAEKRKASSLTLGIIS FLYTIPSISMLGFLIPVTGIGNTSAIIALSIYALLPIIRSTYTGITGVEEDILEAARGMG STAAQILWRIKLPLAMPVILSGFKNMVVMTIALAGIASFIGAGGLGVAIYRGITTNNLTM TLAGSLAVAVLAFVFDILMNILESFFTKRKHSRKQKRAVAVVLLCILLAGCTTMLTIPSK KDTIHIATKPMTEEFIIGEMLKQLIEDRTDLSVEITKGVGGGTSNIHPAMVKGDFDMYPE YTGTSWSFVLKKKEIPEHDILYKELVREYKQQYHLEWTGLYGFNNTYGIAVTKETAQRYH LKTYADLASVSSRMSFGAEYDYYERDDGYDAMVKANDFHFKKSIDLDIGLKYDALLKKEV DAILVFTTDGRISDPDIVVLQDENNYFEKYYAGTVVREETLATYPQLRSVLELLNGQITE KEMAEMNNDVETKGRNEADVARDFLVKKQLLEVTK >gi|312955264|gb|AENW01000043.1| GENE 267 277753 - 278481 336 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 238 2 240 245 134 35 5e-30 MSSIRMEHIVHSYGEHTVLKDFSMDIQDGEFISVIGGSGSGKTTVLKLINGLLIPDQGEI YVQDKAIRKVDQNELRRNIGYVIQSIGLFPHMTIEENIGYVLSLTKQDSALIQERVKEMM DIMKLEKQLLTRYPDELSGGQKQRVGIARALASHPKILLMDEPFGAVDEITRHSLQDEIL RIYHELHITIFFITHDIREALRLGTRVMIMKDGNIEQFDTPDIVKKQPQTEFVRQLLSYL NE >gi|312955264|gb|AENW01000043.1| GENE 268 279272 - 279742 360 156 aa, chain + ## HITS:1 COG:YPO2003 KEGG:ns NR:ns ## COG: YPO2003 COG0716 # Protein_GI_number: 16122245 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 13 156 85 231 235 86 29.0 2e-17 MKKRLVAYFSAGGTTKKVAEMIANCANADLIEITPKTPYTERDLNWMDKKSRSSIEMSDK TYRPELLDIDIDMNTYHEIILGFPIWWYVAPTIVHTFLEKYNFSDKKIILFATSGGSGFG NTMRELQPSVPNSVIEEGRIFNNTTRQQIMKWVETL >gi|312955264|gb|AENW01000043.1| GENE 269 279761 - 280552 471 263 aa, chain + ## HITS:1 COG:MA0416 KEGG:ns NR:ns ## COG: MA0416 COG1917 # Protein_GI_number: 20089309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 123 255 8 141 141 130 49.0 3e-30 MKKIIQTAGRNALEEFAPQFAHFNDDVLFGENWNNHDIDVKTRSIITVVALMASGITDTS LKFHLQNAKRHGVTQKEIAAIITHVAFYAGWPKGWAVFTLAKEVWNVNEGDLPYEDAAMR AHAKDMIFPIGDPNDDFAKYFSGRSFLAPVSTSQVAIYNVTFEPGCRNNWHIHHAKSGGG QILICVAGRGFYQEEGKSVIEMKAGDCISILEGVKHWHGAASNEWFSHLAIEVPGIEVSN EWCEPVTDEQYLQLEYEKKSYEL >gi|312955264|gb|AENW01000043.1| GENE 270 280911 - 281498 245 195 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 38 195 5 176 179 88 32.0 7e-18 MKRILTTIIYIICLTVLVACSHNTTGIPASEKNTAQENDLKIAVVYFSATGNTKAVAELI ADEAKADIYEIIPDKKYTEDDLNYNNDNCRANLEMKDDASRPSIKNDLSAITEYDVIYLG YPVWWGTNPRIIQTVLDKYDISNSKIYTFCTSGGSGIESSISDLQTMYSNLNIVAGKRFD NPTEEDVKAWLESIG >gi|312955264|gb|AENW01000043.1| GENE 271 282026 - 282637 746 203 aa, chain - ## HITS:1 COG:no KEGG:LSEI_0329 NR:ns ## KEGG: LSEI_0329 # Name: not_defined # Def: kinase # Organism: L.casei # Pathway: not_defined # 2 200 6 205 213 149 41.0 7e-35 MKQTLILLAGYPGTGKSYLAELLMKQFTGFEILSPDEIKEEFWDAYGFRNEQEKEELIQK SWVEYYHRMEWKFTRGISLLSDYPFSYKQHDQLQEVCDKHHVQIITIRMIADLDVLFERQ KKRDLDASRHLGHILKEYHKGIQLTSHEEADNLLDYDEFIQRCTCRGYGTFALGTTLQLD VTDFATAPYDELMIRINELLEFQ >gi|312955264|gb|AENW01000043.1| GENE 272 282652 - 283383 860 243 aa, chain - ## HITS:1 COG:RSc1997 KEGG:ns NR:ns ## COG: RSc1997 COG2188 # Protein_GI_number: 17546716 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 2 242 36 274 274 102 29.0 5e-22 MGALDFSGRQQLYYQLYNLLFQDIISGKYPVGCIIPAESELMKTYHVSRATARKAMEMLA IDGLVSKKRGYGTFVISAQPNTSPQRVVRYTRKNRVDQVIAVKRMINQKVMKAPKDIAEC LQLSDDCDIIRIKRVRYAGEEPFYLEINYFEQSFVPEVMEHDFSKESLRVFLSNAYQIQW SFAKQKIYSILADREMAELLHIAVGSPLLYIRRISFDKDNHPRECVCTYYRADTYHLEIE LAI >gi|312955264|gb|AENW01000043.1| GENE 273 283412 - 284197 939 261 aa, chain - ## HITS:1 COG:AGc3496 KEGG:ns NR:ns ## COG: AGc3496 COG1028 # Protein_GI_number: 15889201 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 257 5 257 261 166 38.0 5e-41 MNHEGMEGSVIVITGGGSGMGAAMAKDFAERGAGIAILDLDEARGSAVADSITDANGKAV YKKVDVTDKQAVLTAADEVEQELGAITSWINSAGVSKMVPFLKSSEELWDLTINVNLKAT FLCCQVAIEKMLKHGGGTILNMSSLSGKKASAWQTVYCASKFGVQGLTQSIAKEFADRNI RVNSICPGIVYTEMWEKLKYEYAQKKGIDPEEVMPYFKKNIPIHRLVDLQDVINAAVFLL TDNSAYLTGQSINLTGGEWMD >gi|312955264|gb|AENW01000043.1| GENE 274 284224 - 284697 554 157 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 157 1 159 161 91 30.0 5e-19 MQNLVLTRIDDRLIHGQVMTAWIRNRKADQVVIVDDGTANDEYMIEVLEMAIPEEIAIGI FTKEEGVQFFEQGLDAPTILLVKGPEALNYLVDHGIAIEEVDVGGMGARADRSVLYKNIS TSPEENKAFSELLEKNVNVFIQVMPQDKPVSVKEYLK >gi|312955264|gb|AENW01000043.1| GENE 275 284666 - 285112 469 148 aa, chain - ## HITS:1 COG:lin0143_1 KEGG:ns NR:ns ## COG: lin0143_1 COG2893 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Listeria innocua # 1 115 1 115 156 71 39.0 6e-13 MVNIILISHGAFCEGLLASLQMIAGGDYGVRAVPLIPGESPEAYREKLETVMREADDGSG SGTIVLSDIAGGTPFQSAAYLSKDFKLGLVSGMNMPMLLTLALERSEETTLEELADKAGI SSTVGVKTTVFKKGEKKQRAKLSINKNR >gi|312955264|gb|AENW01000043.1| GENE 276 285132 - 286790 2035 552 aa, chain - ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 283 549 14 285 286 189 36.0 1e-47 MVLSAILVALLATMGQWWFFGPVTKCLVYPLTTGTLVGLFMGDPMTGMLAGANIQLIYLG WISAGGTMPSNTIVAGIFGTAMTILSGADPTMAVTFAIPFSMFGLLLNQVYMTVNAAWIH QADKLLEKGNLRGVRFMNFVPSFCMALVLYGIPAFLLVVSGSGWASDLINAVPESVISAL QVVGGIMPALGIAMLLNYLGKKKLIPWFFGGFFLTVYSGLGLTAISIFSAIIALVMYLNS NTAQKQTETKKVKRLSLNKKTETIEVSQPADQAAAAELPEYTKKLSKKTLVKTWLWTTST EACYNYERLQALGAANLMLTPIRELYDTNEERVKELKKYMVFYNSEVFTVGPIINGIACS MEEAHANGENVTEKDINAVRTGLMGPVAGIGDTVMQGILFPILFGIGCSMALDGSYLGPI LSFAIFEILIFGCGYFMFMTGYKQGKTSLLKILKNGTIDRIINSFSIVGLMVVGSMAATR VTVNTPLAIKVGEGTTTIQSVLDSLAPGLIPLGITLLVWWMLKKKINTVWIIIAIFLVGI AGYYSGILGYVG >gi|312955264|gb|AENW01000043.1| GENE 277 286806 - 287810 1011 334 aa, chain - ## HITS:1 COG:SMc01214 KEGG:ns NR:ns ## COG: SMc01214 COG1063 # Protein_GI_number: 15965330 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 14 333 14 342 347 213 37.0 3e-55 MKAGYYTGDYGYEVRDIPERRPIADEVKIRVAWCGLCGTDIHKFQGKNGASVVIPPIILG HECSGIVTEVGPECKYFKVGDRVACDPSWGCGKCIWCQQGLPNFCLERHGVAKGFAEYVY PPEKNVYHIADTLDLEAAAFTEPLSCAVHGMDLIGIQSGKTVAMYGMGAIGSLMLQLIRL TGAAKIIVIEREAEKRRLALELGATMAISDQEIEEVAKQENIDYVIECIGLKSTMEQAIR IAGKYAKVLLFGLGDPEQPISFNQFEAYTKELSIYTSFLNPLCSERAVHLLESGQINTKK IISAKLTLEEMGEELKTLRYARKGKVLVSVSGEH >gi|312955264|gb|AENW01000043.1| GENE 278 287814 - 288665 909 283 aa, chain - ## HITS:1 COG:YPO0844 KEGG:ns NR:ns ## COG: YPO0844 COG0191 # Protein_GI_number: 16121152 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Yersinia pestis # 6 276 7 277 284 231 41.0 1e-60 MYTTLKEVLKEAELLHMAIGAFNTHNLEMLPAIIKAAVHQKTPVIIQTSCGTANYVGHRN LVAVCRSMAEEYGVDVVLHLDHARDYDEIRKAIDAGYSSVMFDGSSLPLKENILGTKRVV DYARARNVSVEAELGTVGGTEDGIAVSQDDACYTDPEDAVEFVKQTGIDALAVAIGTSHG QYKSKTNISFERLKELQEVVDIPLVIHGGTGVKDEDVKRVIDLGIRKFNVGTELLVGWNR KSRECYDEHRENISNRDNVVPCLDTITEIVERKIHLFKNLDGE >gi|312955264|gb|AENW01000043.1| GENE 279 288938 - 289684 805 248 aa, chain + ## HITS:1 COG:L47971 KEGG:ns NR:ns ## COG: L47971 COG1737 # Protein_GI_number: 15673967 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 13 244 4 235 244 114 31.0 1e-25 MFIQIDKGIYEKLSEAEKGVIQFLNQNEEKIPYMSITNIAEKTFTSQSTVSRAIQKCGYQ GISQLRYAISQQEQMKEHHESSYGVNNILAKSYRESTKTIDNISPVAMLKTIEYIKQAKR IFIFARGFTALIAEEFQMYLQLLGYNAIIVKDVKWMENTERIVTKDDIAFILSLRNSTPE LARSARAARMKGAKVITCCCKSPCELEKFSDITIYGHSEQIMKVSGMTVYSRIPLLIITR TIIEYIGQ Prediction of potential genes in microbial genomes Time: Sat May 14 02:43:26 2011 Seq name: gi|312955247|gb|AENW01000044.1| Clostridium sp. HGF2 contig00048, whole genome shotgun sequence Length of sequence - 15860 bp Number of predicted genes - 16, with homology - 14 Number of transcription units - 7, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3 - 62 6.7 1 1 Tu 1 . + CDS 105 - 296 215 ## PROTEIN SUPPORTED gi|167755880|ref|ZP_02428007.1| hypothetical protein CLORAM_01397 + Term 307 - 338 1.1 - Term 468 - 508 -0.5 2 2 Tu 1 . - CDS 563 - 2185 650 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 - Prom 2252 - 2311 7.0 - Term 2282 - 2318 3.1 3 3 Op 1 6/0.000 - CDS 2362 - 2940 639 ## COG1564 Thiamine pyrophosphokinase 4 3 Op 2 10/0.000 - CDS 2955 - 3620 1000 ## COG0036 Pentose-5-phosphate-3-epimerase 5 3 Op 3 7/0.000 - CDS 3668 - 4537 955 ## COG1162 Predicted GTPases 6 3 Op 4 17/0.000 - CDS 4534 - 6267 2111 ## COG0515 Serine/threonine protein kinase 7 3 Op 5 5/0.000 - CDS 6260 - 7009 1037 ## COG0631 Serine/threonine protein phosphatase 8 3 Op 6 . - CDS 7006 - 8061 1451 ## COG0820 Predicted Fe-S-cluster redox enzyme - Term 8579 - 8633 -0.6 9 4 Tu 1 . - CDS 8683 - 8874 60 ## + Prom 9247 - 9306 7.4 10 5 Tu 1 . + CDS 9335 - 9487 112 ## + Term 9597 - 9639 5.2 - Term 9585 - 9627 4.4 11 6 Op 1 17/0.000 - CDS 9764 - 11095 1379 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 12 6 Op 2 . - CDS 11088 - 12485 1368 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 12626 - 12685 7.7 + Prom 12583 - 12642 4.2 13 7 Op 1 . + CDS 12710 - 13588 543 ## COG2207 AraC-type DNA-binding domain-containing proteins 14 7 Op 2 . + CDS 13578 - 14036 502 ## Ccel_3263 transcription activator effector binding 15 7 Op 3 45/0.000 + CDS 14135 - 14980 566 ## COG1131 ABC-type multidrug transport system, ATPase component 16 7 Op 4 . + CDS 14977 - 15732 430 ## COG0842 ABC-type multidrug transport system, permease component Predicted protein(s) >gi|312955247|gb|AENW01000044.1| GENE 1 105 - 296 215 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167755880|ref|ZP_02428007.1| hypothetical protein CLORAM_01397 [Clostridium ramosum DSM 1402] # 1 58 1 58 61 87 65 6e-17 MSKVCAITGKGPLSGNKRSHSMRASRRNWNVNLQKVKVVVDGKPQTIRISARALKTLKNK KAI >gi|312955247|gb|AENW01000044.1| GENE 2 563 - 2185 650 540 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 33 538 31 544 546 254 31 2e-67 MLELKLKSGEVKQCEAGAYVHELLEAWNVKEAVYAVTLDGKLHDLNYRIKKSGALDYIYA DSETGKLIYERSLNFLFIVAVRSLFPDARVRMEHALSGGQYCEIDKEGYCKPQDVRKIEK RMKELIAANEVIHRRVVATAEAQAYFDRLGMKNKANLLACRKSATSSIYTLCGYDDYFYG IMLPDTSYLTHFSIRFYAPGVWLSAGNGFQNQAKLFHVFQEFETWGRLIGVSNIAELNAQ IQQGYMDDLVLMSETMVEKKLAELAASIVQGHPHTKFILIAGPSSAGKTTFSRRLAIHLK ILGKKPMPISMDDFYKNREDCPRLPDGSYDFEGLEALDLELFNDTMLKLLHKEAVHMPLF NFKTGQREWKERETVLEDDHILIIEGIHGLNPKTSADLPEEAKFRIYINALTHLNLDEHN RIPTSDYRLIRRIARDYQFRSWSAQNTIHFWKNVKQGEDHNIYPYQEEADAIFNSSMVYE MSILKKIVIPLLDQVHPHEAQYLEANRLKKLLAYFVDGSEEAVPRSSILAEFIGNSVFDV >gi|312955247|gb|AENW01000044.1| GENE 3 2362 - 2940 639 192 aa, chain - ## HITS:1 COG:lin1931 KEGG:ns NR:ns ## COG: lin1931 COG1564 # Protein_GI_number: 16800997 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Listeria innocua # 13 191 28 214 214 111 36.0 7e-25 MCETAPVIAHADYIGVDHGAVCCMRQGIAMRKAVGDFDSITREELAQLKQYCEVEKLPSH KNETDTEVAIEAALQLGYDDIILYGGLGGRLDHEMANLHLMIYRELPLTLMNDTNIIKVL HPGIYEVEKLHTYLSFLPLEDSCISEEGVAYPLKERVLKVTDIYPLSNEINGNIARITIH YGRVLMMQCRDA >gi|312955247|gb|AENW01000044.1| GENE 4 2955 - 3620 1000 221 aa, chain - ## HITS:1 COG:lin1932 KEGG:ns NR:ns ## COG: lin1932 COG0036 # Protein_GI_number: 16800998 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Listeria innocua # 6 218 4 214 218 199 46.0 2e-51 MKELVIAPSILSLDYSRTSEQLKELDESNAKWMHFDVMDGHFVPNLTFGPDLLKGFKKAV DMVMDVHIMVDNPDMVAEIFAKAGADVITFHLEAVKDVDACIQLCRKIREMGVQAGVSVK PKTGVDALLTHLKEMDLVLIMSVEPGFGGQSFMEDTLEKVRILRERIEKEGLNTRIEIDG GINGETAKLAVAAGVDTLVAGSYVFKNGIAESVDKLLACQR >gi|312955247|gb|AENW01000044.1| GENE 5 3668 - 4537 955 289 aa, chain - ## HITS:1 COG:BS_yloQ KEGG:ns NR:ns ## COG: BS_yloQ COG1162 # Protein_GI_number: 16078641 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus subtilis # 5 289 4 298 298 244 45.0 1e-64 MTETGRIIKIVSSRYEVLAANQERVLCVAMGKLRKAHSPVVGDLVEFERFADQNGIQKIL PRKNALVRPSIANVDQAIIVMSCKDPDFSTTLIDRLIFSVCYAGIRPVLCITKLDLIAEN DAIHEEIQHYIDSGYEVYQSGKGYASEDLIQALKGNISVLTGQSGAGKSSLLNRIDPTFH LQTQEISKALGRGKHTTRHCELHEIAGGWVADTPGFSSLDFTAMNITQLAECIPDFQNVQ DACRFRDCIHVNEPDCAIRAAVEDGTIRRERYAHYLEIVDMIQKAKPRY >gi|312955247|gb|AENW01000044.1| GENE 6 4534 - 6267 2111 577 aa, chain - ## HITS:1 COG:L138452_1 KEGG:ns NR:ns ## COG: L138452_1 COG0515 # Protein_GI_number: 15673869 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Lactococcus lactis # 6 428 6 429 431 291 39.0 2e-78 MNNNNKMIAERYMIVSSLGEGGMADVYLAIDTILNREVAIKVLRGELSKDPVTLLRFQRE ANAVSKLNHPNVVDVYDVGEFEGRHYIVMEYVRGRTLKQLISQRGALHQEEAVNIMIQLT SAVQHAHENDIIHRDIKPQNVLVKDDGTVKITDFGIALAHDTVQLTQSDAVLGSAHYLAP ETTRGETPSNQVDIYALGIVFYELLTGNVPFHGDNPVQIAMKHLREEIPSVRDFNPTLPQ SVENIIIKATVKNRKLRYQSAKDMLYDLHRCLLPEYAHVEKLVFEEEHPQPTMVMEQRKQ KQTKKTEVRKKHVEPIEEDEEDDSGNRKITTIIIAMIVGLCVIGVAAFVLMSGIFDKEKM IKVPELSTSQTQQEAIQTLTSSGFKKDNITIKQELSDDVEKGHVIRVSPDTGEEIGEKSK LTLTVSRGTWFVVKDYRHRLPEEVEKELNEQNPNIKLEISYEQRANTWPGYIAEQSGLEI GEKLDPDKEYTLKITVSQLMSWKIEGVVGKTAEEAIALIKEKTGILPVSDERSYDDLSEE EQKTIKKGVVTDVDPAEGTEYVQQMENPNVITIRFYK >gi|312955247|gb|AENW01000044.1| GENE 7 6260 - 7009 1037 249 aa, chain - ## HITS:1 COG:lin1935 KEGG:ns NR:ns ## COG: lin1935 COG0631 # Protein_GI_number: 16801001 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Listeria innocua # 12 243 10 242 252 161 39.0 1e-39 MSIQYYGASHVGLRRRNNQDSICFLENGEHALLAVVCDGIGGGLAGDVASRMAIEHMKES FLKMEKCSSDVQVKHWLQDTIQEANDLIFTQSTRNTEQKGMGTTLVGILKCETTTYIFNV GDSRTYGLYADDFLALTEDHSYIADMLKRGELSEEEAAVHPNRNMLTNALGIWDSVRIDI NKIKNDYKALLICSDGLHGYVSEAIIREILESKRSVEDKVRMLIDKALLAGGYDNVSVII VEQAGDLHE >gi|312955247|gb|AENW01000044.1| GENE 8 7006 - 8061 1451 351 aa, chain - ## HITS:1 COG:SP0768 KEGG:ns NR:ns ## COG: SP0768 COG0820 # Protein_GI_number: 15900662 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Streptococcus pneumoniae TIGR4 # 3 347 4 353 361 398 54.0 1e-110 MKSLYDFTYDQMGDMALEQGWKKFRAHQIFQWLYRKRAVSIDDMSDLSKDTRETLKQQFS LTPLKLRDKQVASDGTTKYLFALEDGSLIESVLMQFDYGKSICVTSQVGCNMACAFCASG LTKKKRNLTSGEMVAQVLYVQRDLDKQEDRLSHIVVMGTGEPFDNYEHVMNFLSTVNHDR GLGIGARHITISTCGVVPKIYEFAKEHTQYNLAISLHAPNNELRDRLMPVNRAYPLEELM EAIQYYARENNRRLTFEYILLRGVNDQKEHVAQLAKLLKGLNAYVNLIPYNAVDENGFQG VDHAHAMVFYDALMKQGVRCTIRKEHGADIDAACGQLRVKHLKKEQEGSRS >gi|312955247|gb|AENW01000044.1| GENE 9 8683 - 8874 60 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLLHIYIRMQYTKLLKEIKIFFKIMVEVDAGIFYNKSAKSKGRKAKRKGQSYVVVTLSL LTQ >gi|312955247|gb|AENW01000044.1| GENE 10 9335 - 9487 112 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKFLLMHQVIGGRMNYIIWILIALIGIIPKVLRELGIILYIVLKYKRRH >gi|312955247|gb|AENW01000044.1| GENE 11 9764 - 11095 1379 443 aa, chain - ## HITS:1 COG:CAC1829 KEGG:ns NR:ns ## COG: CAC1829 COG0312 # Protein_GI_number: 15895105 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Clostridium acetobutylicum # 3 442 7 453 454 217 30.0 4e-56 MHKQRWLDAAKAAGIEQLEIYEQKSRSTSIRLFEGSVDGYTISECNGFAIRGIYKGNMGI CFLEQDDDALLEDTLCRIKENAEVITSRDEVEIYAGDSAYPQLQLRSCTWNAHPDAEKIE MLKTVEQYIKESDARIAQVMNTSYGEVDVEIAIDNTLGVHLHDAQHAAYISTAVMAKDQE DTKIAGDWQYLYDDVCFDAKKFAAGVSRKVLDKLSAESVQSAQYPVLIENEAMADLLAAF SGMFDGENAYKGISLLNDSIEKQIFSDKITIVDDPLLKNGYNSRSFDDEGVACRNKILVD KGVLKTYLHNLKSAKLMNCETTGNGFKAGYASNVGIAPSNLFIENGSTSMDEMIASMEEG IIVTEITGLHAGLNAMTGEFSLQSQGWYVKDGKKVKPVNLITIAGNFLEAMKQVEMLGND GKLNAGSIGSPSILFTSFSVSGL >gi|312955247|gb|AENW01000044.1| GENE 12 11088 - 12485 1368 465 aa, chain - ## HITS:1 COG:TM0726 KEGG:ns NR:ns ## COG: TM0726 COG0312 # Protein_GI_number: 15643489 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Thermotoga maritima # 1 457 38 496 499 435 50.0 1e-122 MLEKNILEDVLEIACSTTGDFAEIFEEVNYSTRISMLNDEVESTNSGIRCGLGLRIYHGL ESVYGYTNDTDEKNLKEFAKKLADSLGEQGKHIPVQLKEITYENAHIIRRIPRETALKDK VALMRRASEAAQSYDAHITKAIVNYQDDEQHVAISNSEGKYIRDVRIRTRMAVSAVAQDG ALRETGSCSPGGSEGMEFYDTHKPEDIGKEAARIAMTMLYAQPCPSGVMPVIIDNGFGGV IFHEACGHSLEARGVAKNQSNFAGKLGQRIASECVTAVDDGTIPNAWGSTNIDDEGNFTR RTVLIEKGILKSYLVDTLNGRRLNMPSTASSRRQSYKYETTSRMTNTFLLNGTDQLEDMI KETSYGLYAKTMAGGSVQATGDFNFAVREAYLIEDGKITTPVKGATLIGNGSDTLLKIDR VAGNLARAQGMCGSSSGSIPTDVGQPAIRVSEMTVGGSKGGKEHA >gi|312955247|gb|AENW01000044.1| GENE 13 12710 - 13588 543 292 aa, chain + ## HITS:1 COG:BH0594_1 KEGG:ns NR:ns ## COG: BH0594_1 COG2207 # Protein_GI_number: 15613157 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 1 126 1 126 127 165 57.0 8e-41 MEWLRKLSDAIAYIEQNLDAEISYEEAARIACCSPYYFQRMFSYVAGISLSDYIRRRRMS QAAFDLQRCDARVLDVALKYGYTSPTAFNRAFQKVHGIPPTAAKNIGKTLHAYPPIQFSV NITGGSPMAYHIAEKRELRFAGIRIRLCEEMEENHKIVPHFWKETMQSPQYTELCQLSDT GTNAIFGISVYEDPDHIFYYIAVATSKKIPSRFHELRIPAATWAVFENKGNFKENVQDIF RRFYSEWLLFSGYEYARLPDIEAYPVQTQAPYDNQCNVWIAIHKEEEKKHGI >gi|312955247|gb|AENW01000044.1| GENE 14 13578 - 14036 502 152 aa, chain + ## HITS:1 COG:no KEGG:Ccel_3263 NR:ns ## KEGG: Ccel_3263 # Name: not_defined # Def: transcription activator effector binding # Organism: C.cellulolyticum # Pathway: not_defined # 1 151 1 151 151 166 54.0 3e-40 MEYKIEIREIEPLCVAYMSYEGDVTKANRVFPKVFQSIHGKTNGAPFFNYLSMNPETKQG ALELCVPTDEVPCTQDIEVKQMPRIKAVCVTHIGSYATLPLAYAAIDQYAVKHSLKISAP FREVFIKGPGMLFKGNPKKYITEIQFPILEEA >gi|312955247|gb|AENW01000044.1| GENE 15 14135 - 14980 566 281 aa, chain + ## HITS:1 COG:TVN0935 KEGG:ns NR:ns ## COG: TVN0935 COG1131 # Protein_GI_number: 13541766 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Thermoplasma volcanium # 1 279 45 321 339 177 37.0 1e-44 MLGQNGAGKSTLLRILTTYLQPTSGRITMLEKDLCRDAASLRSQIACVAQQTSIDTYLSL EENMLLQSRLYRIPKRDAEKRMETLIVDFGLEPYRRYPVSSYSGGVKRRLDIALNMMTNP KILFLDEPTVGMDVQSRIAMWGMMRKIRDDFGVTIFLTTHYLEEADQLSNTVCIMKDGKE VTQGSPAQLRSLLRQNSIEITFSSEAEARKGCGILKEQMSKEILLRAEKLLIYTQTPQSD IEAAAAVLLKRHAAFQGIEIAQPTLEDVYLRLTQSERKECV >gi|312955247|gb|AENW01000044.1| GENE 16 14977 - 15732 430 251 aa, chain + ## HITS:1 COG:MTH1092 KEGG:ns NR:ns ## COG: MTH1092 COG0842 # Protein_GI_number: 15679103 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Methanothermobacter thermautotrophicus # 3 214 10 220 257 91 29.0 2e-18 MSVFTLLYRNIKWRFHNKFTIVMTALQPILWLILYSAIASSTMQHSGIENYTAFMLPGLI VLISFSTCSSSGIMNYLMKSDGSFDRILIAPLTRSSIVLAQLFEAVLCTFLEVGIMIALS LLFSVRFSLPLSGYLIFISLIFLTSFFMAGLSYGISMLLPNEVIYETVMNAIVLPVFFLS NALFPMTGITGFLHTAINLNPFTHMIQALRSLILYGRIDTGNLTAVLLLFILMGSLSFLW ACRQLEKKTNL Prediction of potential genes in microbial genomes Time: Sat May 14 02:43:43 2011 Seq name: gi|312955243|gb|AENW01000045.1| Clostridium sp. HGF2 contig00012, whole genome shotgun sequence Length of sequence - 1421 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 109 - 177 7.3 1 1 Op 1 . - CDS 186 - 422 171 ## CD0358 hypothetical protein 2 1 Op 2 . - CDS 428 - 847 235 ## CD3371 conjugative transposon protein - Prom 956 - 1015 4.8 - Term 939 - 982 5.1 3 2 Tu 1 . - CDS 1024 - 1248 164 ## Predicted protein(s) >gi|312955243|gb|AENW01000045.1| GENE 1 186 - 422 171 78 aa, chain - ## HITS:1 COG:no KEGG:CD0358 NR:ns ## KEGG: CD0358 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 77 1 77 84 69 49.0 3e-11 MKKDYGYPSYDLICRASNGDEKAVRGILDFYNAYISKVCLRPCYHANGTVNMQVDEELKG RIHTEMMKAILRFEIREK >gi|312955243|gb|AENW01000045.1| GENE 2 428 - 847 235 139 aa, chain - ## HITS:1 COG:no KEGG:CD3371 NR:ns ## KEGG: CD3371 # Name: not_defined # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 137 1 137 138 85 34.0 7e-16 MGTSSSEHIVRLQFNALMMIVIKGALSSHRRQIARRSKHEILFCELPEMKQIEYGMSDEY SCDYVSFQVMHFVIYVADEELSTALKELTEKQRNAILLYFFQGMNDREISKLYHVSRSAI NSRRDRGLRKLQKLLNEME >gi|312955243|gb|AENW01000045.1| GENE 3 1024 - 1248 164 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDRDIFEDMKIETECSYISDLPYIKNTVEKKLFELPFDLYSKEQLQEFCDYVFRDNGAVY QSLMMKYRRNSRYN Prediction of potential genes in microbial genomes Time: Sat May 14 02:44:54 2011 Seq name: gi|312955012|gb|AENW01000046.1| Clostridium sp. HGF2 contig00057, whole genome shotgun sequence Length of sequence - 222302 bp Number of predicted genes - 212, with homology - 184 Number of transcription units - 102, operones - 46 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 761 - 1750 877 ## COG0673 Predicted dehydrogenases and related proteins - Prom 1967 - 2026 7.6 - TRNA 2526 - 2609 72.1 # Leu TAG 0 0 + Prom 2757 - 2816 6.3 3 2 Op 1 . + CDS 2847 - 4283 1696 ## CDR20291_0675 putative lipoprotein 4 2 Op 2 6/0.000 + CDS 4283 - 6661 2330 ## COG2199 FOG: GGDEF domain 5 2 Op 3 . + CDS 6746 - 7213 512 ## COG2200 FOG: EAL domain + Term 7360 - 7418 2.2 - Term 7349 - 7406 9.0 6 3 Tu 1 . - CDS 7525 - 9312 1719 ## COG3711 Transcriptional antiterminator - Prom 9463 - 9522 6.0 + Prom 9345 - 9404 3.7 7 4 Op 1 2/0.133 + CDS 9440 - 11038 2069 ## COG0477 Permeases of the major facilitator superfamily 8 4 Op 2 . + CDS 11072 - 12652 1861 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold + Term 12694 - 12739 3.2 - Term 12688 - 12722 0.4 9 5 Tu 1 . - CDS 12881 - 13189 427 ## - Prom 13209 - 13268 5.9 + Prom 13471 - 13530 6.5 10 6 Op 1 . + CDS 13666 - 14076 527 ## COG0071 Molecular chaperone (small heat shock protein) + Term 14081 - 14119 2.9 + Prom 14078 - 14137 2.4 11 6 Op 2 . + CDS 14157 - 15839 1371 ## COG0366 Glycosidases 12 7 Op 1 . - CDS 16008 - 17216 938 ## CD2274 hypothetical protein 13 7 Op 2 . - CDS 17213 - 18070 889 ## Cphy_1272 hypothetical protein 14 7 Op 3 5/0.000 - CDS 18057 - 18671 660 ## COG4709 Predicted membrane protein 15 7 Op 4 2/0.133 - CDS 18658 - 18984 458 ## COG1695 Predicted transcriptional regulators - Prom 19018 - 19077 4.8 16 8 Tu 1 . - CDS 19291 - 20106 709 ## COG0500 SAM-dependent methyltransferases - Prom 20203 - 20262 6.3 + Prom 20799 - 20858 6.8 17 9 Op 1 . + CDS 20912 - 21025 90 ## + Prom 21033 - 21092 3.0 18 9 Op 2 . + CDS 21114 - 21320 236 ## gi|153853942|ref|ZP_01995275.1| hypothetical protein DORLON_01266 19 9 Op 3 . + CDS 21330 - 21662 246 ## Apre_1190 hypothetical protein - Term 21783 - 21819 -0.6 20 10 Op 1 . - CDS 21944 - 22639 552 ## SDEG_1340 hypothetical protein 21 10 Op 2 . - CDS 22534 - 22740 97 ## - Prom 22851 - 22910 5.8 22 11 Op 1 . - CDS 22977 - 23342 419 ## COG3603 Uncharacterized conserved protein 23 11 Op 2 . - CDS 23371 - 23646 236 ## gi|160941403|ref|ZP_02088740.1| hypothetical protein CLOBOL_06296 24 11 Op 3 . - CDS 23504 - 23923 77 ## gi|225420184|ref|ZP_03762487.1| hypothetical protein CLOSTASPAR_06527 25 11 Op 4 . - CDS 23963 - 24490 580 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 24759 - 24818 12.8 26 12 Tu 1 . + CDS 24856 - 25989 966 ## 27 13 Op 1 . - CDS 26633 - 27391 908 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 28 13 Op 2 . - CDS 27376 - 28197 610 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 29 13 Op 3 2/0.133 - CDS 28194 - 28895 257 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 30 13 Op 4 . - CDS 28901 - 29509 472 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 31 13 Op 5 . - CDS 29512 - 30681 1016 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 32 13 Op 6 7/0.000 - CDS 30692 - 31534 365 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 33 13 Op 7 8/0.000 - CDS 31534 - 32385 898 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 34 13 Op 8 8/0.000 - CDS 32366 - 33478 1371 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 35 13 Op 9 . - CDS 33483 - 34061 584 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 36 13 Op 10 . - CDS 34072 - 34494 454 ## OB0968 hypothetical protein - Prom 34594 - 34653 5.3 - Term 34586 - 34631 8.2 37 14 Tu 1 . - CDS 34694 - 35443 634 ## COG3910 Predicted ATPase - Prom 35524 - 35583 4.4 - Term 35678 - 35726 10.5 38 15 Op 1 3/0.067 - CDS 35728 - 36411 717 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 39 15 Op 2 . - CDS 36418 - 36756 609 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) - Term 36828 - 36855 -0.4 40 16 Op 1 8/0.000 - CDS 36862 - 37296 766 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 41 16 Op 2 11/0.000 - CDS 37299 - 38537 1596 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 42 16 Op 3 26/0.000 - CDS 38538 - 39269 250 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 43 16 Op 4 3/0.067 - CDS 39274 - 40224 1007 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 44 16 Op 5 . - CDS 40297 - 41352 1206 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 45 16 Op 6 . - CDS 41345 - 42295 1159 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 46 16 Op 7 . - CDS 42306 - 43280 1141 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 47 16 Op 8 10/0.000 - CDS 43267 - 44199 1210 ## COG0825 Acetyl-CoA carboxylase alpha subunit 48 16 Op 9 4/0.000 - CDS 44196 - 45068 1060 ## COG0777 Acetyl-CoA carboxylase beta subunit 49 16 Op 10 27/0.000 - CDS 45052 - 46419 1565 ## COG0439 Biotin carboxylase 50 16 Op 11 . - CDS 46416 - 46880 455 ## COG0511 Biotin carboxyl carrier protein - Term 46897 - 46924 0.1 51 16 Op 12 . - CDS 46936 - 47160 450 ## gi|293402141|ref|ZP_06646280.1| acyl carrier protein (ACP) - Prom 47192 - 47251 5.1 52 17 Op 1 6/0.000 + CDS 47678 - 48715 1176 ## COG1145 Ferredoxin 53 17 Op 2 2/0.133 + CDS 48717 - 49517 855 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 54 17 Op 3 . + CDS 49530 - 50534 1268 ## COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits + Term 50591 - 50622 2.5 + Prom 50597 - 50656 6.8 55 18 Tu 1 . + CDS 50715 - 51083 481 ## + Term 51131 - 51167 6.5 + Prom 51246 - 51305 5.0 56 19 Tu 1 . + CDS 51341 - 52594 571 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 + Term 52731 - 52774 6.1 - Term 52717 - 52762 7.4 57 20 Tu 1 . - CDS 52806 - 54023 1510 ## COG1454 Alcohol dehydrogenase, class IV - Prom 54154 - 54213 5.4 - Term 54165 - 54203 1.0 58 21 Tu 1 . - CDS 54367 - 55896 591 ## PROTEIN SUPPORTED gi|225093729|ref|YP_002662469.1| ribosomal protein S15 - Prom 55953 - 56012 8.9 + Prom 56006 - 56065 5.1 59 22 Op 1 . + CDS 56097 - 57299 1267 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 60 22 Op 2 . + CDS 57299 - 58078 1009 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor - Term 58225 - 58276 0.8 61 23 Tu 1 . - CDS 58343 - 58804 640 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 59044 - 59103 6.8 + Prom 58896 - 58955 5.6 62 24 Tu 1 . + CDS 58975 - 60621 1468 ## CLL_A2076 hypothetical protein + Term 60686 - 60728 3.3 - Term 60674 - 60716 3.3 63 25 Op 1 . - CDS 60849 - 62009 639 ## Dhaf_4021 hypothetical protein 64 25 Op 2 . - CDS 62045 - 62911 1078 ## COG1284 Uncharacterized conserved protein - Term 62941 - 62978 4.1 65 26 Op 1 . - CDS 62986 - 63621 508 ## Cphy_1284 hypothetical protein 66 26 Op 2 . - CDS 63590 - 63946 394 ## Cphy_0452 hypothetical protein 67 26 Op 3 . - CDS 63943 - 64596 943 ## BBR47_55250 hypothetical protein - Prom 64629 - 64688 10.2 + Prom 64730 - 64789 7.5 68 27 Op 1 1/0.267 + CDS 64815 - 65396 656 ## COG1309 Transcriptional regulator 69 27 Op 2 2/0.133 + CDS 65400 - 68330 3244 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 70 27 Op 3 . + CDS 68333 - 69631 1462 ## COG3581 Uncharacterized protein conserved in bacteria + Term 69642 - 69683 3.2 71 28 Tu 1 . - CDS 69941 - 70126 204 ## - Prom 70376 - 70435 5.9 - Term 70403 - 70439 1.4 72 29 Tu 1 . - CDS 70500 - 71168 594 ## COG0692 Uracil DNA glycosylase - Prom 71241 - 71300 3.3 - Term 71200 - 71245 3.0 73 30 Tu 1 . - CDS 71353 - 73071 1240 ## COG2200 FOG: EAL domain - Prom 73217 - 73276 7.6 74 31 Tu 1 . - CDS 73537 - 75456 1674 ## COG1289 Predicted membrane protein - Prom 75626 - 75685 7.8 75 32 Tu 1 . - CDS 75801 - 77552 2021 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 77609 - 77668 6.8 - Term 77656 - 77702 5.7 76 33 Tu 1 . - CDS 77714 - 78628 1032 ## COG0582 Integrase - Prom 78718 - 78777 6.8 - Term 78983 - 79010 -0.8 77 34 Op 1 . - CDS 79081 - 80409 1298 ## COG0144 tRNA and rRNA cytosine-C5-methylases 78 34 Op 2 . - CDS 80440 - 82881 2177 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 82937 - 82996 2.9 - Term 83066 - 83098 3.1 79 35 Op 1 . - CDS 83116 - 83658 636 ## COG1592 Rubrerythrin - Prom 83685 - 83744 4.0 80 35 Op 2 . - CDS 83748 - 84509 745 ## gi|293401632|ref|ZP_06645774.1| integral membrane protein + Prom 84515 - 84574 4.6 81 36 Tu 1 . + CDS 84615 - 84893 189 ## gi|160915655|ref|ZP_02077863.1| hypothetical protein EUBDOL_01662 + Term 84928 - 84981 1.3 82 37 Tu 1 . - CDS 85050 - 85598 809 ## EF1190 hypothetical protein - Prom 85628 - 85687 9.6 - Term 85678 - 85708 -0.9 83 38 Op 1 . - CDS 85710 - 86990 1125 ## 84 38 Op 2 . - CDS 86992 - 87738 825 ## 85 38 Op 3 . - CDS 87748 - 89046 1016 ## gi|293401647|ref|ZP_06645789.1| hypothetical protein HMPREF0863_01929 86 38 Op 4 . - CDS 89046 - 90479 1328 ## 87 38 Op 5 . - CDS 90479 - 91906 1257 ## 88 38 Op 6 . - CDS 91914 - 92729 838 ## 89 38 Op 7 8/0.000 - CDS 92707 - 93456 1050 ## COG1131 ABC-type multidrug transport system, ATPase component 90 38 Op 8 . - CDS 93514 - 93888 384 ## COG1725 Predicted transcriptional regulators - Prom 93911 - 93970 2.1 - Term 93951 - 94007 12.7 91 39 Op 1 . - CDS 94022 - 94687 693 ## COG0120 Ribose 5-phosphate isomerase 92 39 Op 2 . - CDS 94680 - 96083 1597 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 93 39 Op 3 . - CDS 96080 - 97492 1766 ## COG0362 6-phosphogluconate dehydrogenase 94 39 Op 4 . - CDS 97505 - 98437 1105 ## COG2706 3-carboxymuconate cyclase - Prom 98482 - 98541 6.4 - Term 98619 - 98661 3.1 95 40 Tu 1 . - CDS 98675 - 99295 799 ## COG4684 Predicted membrane protein - Prom 99418 - 99477 5.0 + Prom 99465 - 99524 5.2 96 41 Tu 1 . + CDS 99544 - 100011 285 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 100233 - 100289 4.5 - Term 100220 - 100277 2.2 97 42 Tu 1 . - CDS 100321 - 100536 126 ## - Prom 100711 - 100770 11.7 - Term 100785 - 100834 3.2 98 43 Op 1 . - CDS 100843 - 101592 596 ## 99 43 Op 2 . - CDS 101583 - 102551 988 ## COG3191 L-aminopeptidase/D-esterase - Prom 102571 - 102630 3.0 100 44 Tu 1 . + CDS 102950 - 103924 932 ## LA_1827 hypothetical protein + Term 103939 - 104000 5.3 + Prom 104217 - 104276 7.2 101 45 Tu 1 . + CDS 104348 - 104797 129 ## Blon_0991 hypothetical protein + Term 104938 - 104976 3.0 - Term 104783 - 104818 5.3 102 46 Tu 1 . - CDS 104831 - 107041 1340 ## COG5492 Bacterial surface proteins containing Ig-like domains - Prom 107254 - 107313 7.0 - Term 107445 - 107490 3.3 103 47 Op 1 . - CDS 107496 - 108566 894 ## Acid345_0658 amidohydrolase 2 104 47 Op 2 21/0.000 - CDS 108563 - 109657 1232 ## COG3839 ABC-type sugar transport systems, ATPase components 105 47 Op 3 38/0.000 - CDS 109670 - 110506 662 ## COG0395 ABC-type sugar transport system, permease component 106 47 Op 4 35/0.000 - CDS 110508 - 111383 624 ## COG1175 ABC-type sugar transport systems, permease components 107 47 Op 5 . - CDS 111440 - 112720 1063 ## COG1653 ABC-type sugar transport system, periplasmic component 108 47 Op 6 . - CDS 112766 - 114100 1549 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases - Prom 114154 - 114213 6.5 + Prom 114196 - 114255 7.6 109 48 Op 1 . + CDS 114277 - 115287 809 ## COG1609 Transcriptional regulators 110 48 Op 2 . + CDS 115284 - 116252 644 ## COG2971 Predicted N-acetylglucosamine kinase + Term 116348 - 116393 1.2 - Term 116334 - 116381 4.0 111 49 Tu 1 . - CDS 116551 - 117675 1076 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Term 117693 - 117729 7.1 112 50 Op 1 . - CDS 117737 - 119821 2836 ## COG0480 Translation elongation factors (GTPases) 113 50 Op 2 . - CDS 119834 - 120505 960 ## COG0666 FOG: Ankyrin repeat - Prom 120712 - 120771 4.9 + Prom 120818 - 120877 9.6 114 51 Op 1 . + CDS 120909 - 121175 320 ## gi|293402096|ref|ZP_06646235.1| transcriptional regulator, MarR family 115 51 Op 2 . + CDS 121183 - 121365 197 ## 116 51 Op 3 . + CDS 121362 - 121997 829 ## COG0637 Predicted phosphatase/phosphohexomutase 117 51 Op 4 . + CDS 122007 - 122819 721 ## COG4905 Predicted membrane protein + Prom 122962 - 123021 5.1 118 52 Tu 1 . + CDS 123210 - 124286 1020 ## COG0628 Predicted permease + Term 124330 - 124361 1.1 + Prom 124760 - 124819 2.5 119 53 Tu 1 . + CDS 124868 - 125011 90 ## - Term 124778 - 124823 6.0 120 54 Tu 1 . - CDS 124960 - 125583 660 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 125624 - 125683 4.7 + Prom 125751 - 125810 4.1 121 55 Op 1 . + CDS 125843 - 126334 507 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 122 55 Op 2 . + CDS 126331 - 127203 931 ## Cphy_1046 hypothetical protein 123 55 Op 3 . + CDS 127206 - 128573 1514 ## COG0726 Predicted xylanase/chitin deacetylase + Term 128610 - 128645 5.2 + Prom 128813 - 128872 3.8 124 56 Op 1 . + CDS 128894 - 130261 1340 ## COG0726 Predicted xylanase/chitin deacetylase + Term 130263 - 130295 -1.0 125 56 Op 2 . + CDS 130336 - 130836 360 ## COG0778 Nitroreductase + Term 130874 - 130919 3.4 - Term 130889 - 130929 2.5 126 57 Op 1 . - CDS 130978 - 131457 416 ## Sterm_2228 glyoxalase/bleomycin resistance protein/dioxygenase 127 57 Op 2 . - CDS 131459 - 132376 967 ## COG1446 Asparaginase - Prom 132503 - 132562 8.5 - Term 132676 - 132708 -0.3 128 58 Tu 1 . - CDS 132759 - 133709 1290 ## COG0039 Malate/lactate dehydrogenases - Prom 133738 - 133797 6.0 - Term 133749 - 133795 7.3 129 59 Tu 1 . - CDS 133814 - 134764 1156 ## COG0039 Malate/lactate dehydrogenases - Prom 134810 - 134869 6.7 130 60 Tu 1 . - CDS 135184 - 135534 412 ## COG1780 Protein involved in ribonucleotide reduction - Prom 135556 - 135615 4.8 - Term 135827 - 135876 4.1 131 61 Op 1 24/0.000 - CDS 135932 - 136975 1232 ## COG0208 Ribonucleotide reductase, beta subunit 132 61 Op 2 . - CDS 136988 - 139504 3101 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 139531 - 139590 2.1 - Term 139562 - 139599 2.2 133 62 Tu 1 . - CDS 139640 - 140599 524 ## COG3943 Virulence protein - Prom 140691 - 140750 5.6 - Term 141226 - 141272 -0.8 134 63 Tu 1 . - CDS 141292 - 141930 836 ## gi|293401951|ref|ZP_06646091.1| hypothetical protein HMPREF0863_02232 - Prom 141955 - 142014 3.2 - Term 141979 - 142018 -1.0 135 64 Op 1 4/0.000 - CDS 142129 - 144756 3103 ## COG2217 Cation transport ATPase 136 64 Op 2 . - CDS 144773 - 145036 347 ## COG1937 Uncharacterized protein conserved in bacteria 137 64 Op 3 . - CDS 145033 - 145242 56 ## - Prom 145271 - 145330 8.7 + Prom 145269 - 145328 5.5 138 65 Op 1 . + CDS 145381 - 148200 3011 ## COG4193 Beta- N-acetylglucosaminidase + Term 148212 - 148255 5.5 139 65 Op 2 . + CDS 148280 - 150049 2164 ## COG1164 Oligoendopeptidase F + Term 150145 - 150205 13.0 140 66 Tu 1 . - CDS 150241 - 151212 802 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Prom 151233 - 151292 2.9 141 67 Tu 1 . - CDS 151644 - 153089 1925 ## COG4886 Leucine-rich repeat (LRR) protein - Prom 153117 - 153176 6.1 + Prom 153200 - 153259 7.2 142 68 Op 1 . + CDS 153392 - 153592 247 ## COG1278 Cold shock proteins + Term 153607 - 153642 3.4 + Prom 153613 - 153672 2.7 143 68 Op 2 . + CDS 153692 - 154174 661 ## gi|293401966|ref|ZP_06646106.1| HD domain protein - Term 154197 - 154242 1.2 144 69 Op 1 . - CDS 154331 - 154975 544 ## COG2364 Predicted membrane protein 145 69 Op 2 6/0.000 - CDS 155025 - 155639 563 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 146 69 Op 3 . - CDS 155632 - 156882 760 ## COG3395 Uncharacterized protein conserved in bacteria - Term 156896 - 156931 1.1 147 70 Op 1 . - CDS 156984 - 157826 873 ## COG0191 Fructose/tagatose bisphosphate aldolase 148 70 Op 2 . - CDS 157838 - 158218 317 ## 149 70 Op 3 . - CDS 158241 - 158882 575 ## NGR_b06480 hypothetical protein 150 70 Op 4 13/0.000 - CDS 158927 - 159757 825 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 151 70 Op 5 13/0.000 - CDS 159754 - 160563 921 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 152 70 Op 6 . - CDS 160579 - 161064 537 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 153 70 Op 7 . - CDS 161075 - 162202 921 ## COG1454 Alcohol dehydrogenase, class IV 154 70 Op 8 . - CDS 162186 - 162608 385 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 162673 - 162732 9.1 + Prom 162685 - 162744 12.7 155 71 Op 1 . + CDS 162856 - 163611 408 ## COG1349 Transcriptional regulators of sugar metabolism 156 71 Op 2 . + CDS 163625 - 164443 433 ## Aaci_2206 xylose isomerase domain protein TIM barrel + Term 164658 - 164706 3.2 157 72 Tu 1 . - CDS 164794 - 166128 1293 ## COG0534 Na+-driven multidrug efflux pump - Prom 166160 - 166219 9.8 158 73 Tu 1 . + CDS 166192 - 166986 867 ## COG0789 Predicted transcriptional regulators + Term 167002 - 167040 4.4 159 74 Tu 1 . - CDS 167296 - 167667 373 ## gi|167746582|ref|ZP_02418709.1| hypothetical protein ANACAC_01292 - Prom 167706 - 167765 4.5 - Term 168083 - 168127 4.5 160 75 Tu 1 . - CDS 168130 - 168585 311 ## Sterm_4118 hypothetical protein - Prom 168630 - 168689 3.0 - Term 168677 - 168716 3.5 161 76 Op 1 . - CDS 168926 - 170017 1422 ## COG3839 ABC-type sugar transport systems, ATPase components 162 76 Op 2 . - CDS 170033 - 170203 304 ## 163 76 Op 3 . - CDS 170203 - 172374 2442 ## BCAH187_A2105 hypothetical protein 164 76 Op 4 38/0.000 - CDS 172388 - 173254 1253 ## COG0395 ABC-type sugar transport system, permease component 165 76 Op 5 35/0.000 - CDS 173267 - 174148 1187 ## COG1175 ABC-type sugar transport systems, permease components - Term 174162 - 174194 5.6 166 76 Op 6 . - CDS 174222 - 175556 1183 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 175814 - 175873 8.3 167 77 Tu 1 . + CDS 176112 - 176513 240 ## + Term 176525 - 176555 1.2 + Prom 176533 - 176592 5.8 168 78 Tu 1 . + CDS 176656 - 178113 1359 ## COG3119 Arylsulfatase A and related enzymes + Term 178114 - 178142 1.0 - Term 178496 - 178538 0.5 169 79 Op 1 40/0.000 - CDS 178560 - 179960 1568 ## COG0642 Signal transduction histidine kinase 170 79 Op 2 . - CDS 179960 - 180619 971 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 180645 - 180704 6.8 - Term 180761 - 180794 2.0 171 80 Op 1 6/0.000 - CDS 180809 - 182143 1791 ## COG1109 Phosphomannomutase 172 80 Op 2 7/0.000 - CDS 182163 - 183545 1620 ## COG4856 Uncharacterized protein conserved in bacteria 173 80 Op 3 . - CDS 183545 - 184945 1615 ## COG1624 Uncharacterized conserved protein - Prom 184966 - 185025 3.8 - Term 185540 - 185582 -0.1 174 81 Op 1 . - CDS 185612 - 186010 174 ## 175 81 Op 2 . - CDS 185950 - 186294 229 ## 176 81 Op 3 . - CDS 186284 - 186622 452 ## COG1695 Predicted transcriptional regulators - Term 186915 - 186951 2.6 177 82 Tu 1 . - CDS 187010 - 187780 1026 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 187800 - 187859 6.8 178 83 Tu 1 . + CDS 187888 - 188049 149 ## gi|160914177|ref|ZP_02076399.1| hypothetical protein EUBDOL_00186 + Term 188088 - 188148 5.8 - Term 188015 - 188053 -0.8 179 84 Tu 1 . - CDS 188131 - 190344 2697 ## COG0550 Topoisomerase IA - Prom 190472 - 190531 8.0 - Term 190514 - 190559 1.5 180 85 Op 1 6/0.000 - CDS 190787 - 191953 1555 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 181 85 Op 2 . - CDS 191965 - 193050 1451 ## COG1932 Phosphoserine aminotransferase - Prom 193108 - 193167 7.3 + Prom 193098 - 193157 6.5 182 86 Tu 1 . + CDS 193296 - 194060 806 ## COG0583 Transcriptional regulator + Term 194151 - 194183 2.0 - Term 194024 - 194074 2.1 183 87 Tu 1 . - CDS 194189 - 194377 75 ## 184 88 Op 1 8/0.000 - CDS 194502 - 194834 384 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) 185 88 Op 2 . - CDS 194831 - 195520 813 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 195543 - 195602 6.9 + Prom 195537 - 195596 5.1 186 89 Tu 1 . + CDS 195696 - 195989 106 ## + Term 196145 - 196176 -0.8 + TRNA 196245 - 196320 88.7 # Ala TGC 0 0 - Term 196377 - 196432 6.5 187 90 Tu 1 . - CDS 196437 - 197492 834 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 197512 - 197571 3.4 - Term 198026 - 198084 14.0 188 91 Tu 1 . - CDS 198169 - 199422 500 ## gi|293402001|ref|ZP_06646141.1| hypothetical protein HMPREF0863_02282 - Prom 199462 - 199521 5.3 - Term 199622 - 199653 0.1 189 92 Tu 1 . - CDS 199679 - 200746 775 ## EUBREC_2192 hypothetical protein - Term 201181 - 201208 -0.8 190 93 Op 1 . - CDS 201232 - 202062 734 ## TDE2741 hypothetical protein 191 93 Op 2 . - CDS 202112 - 202651 543 ## gi|293402003|ref|ZP_06646143.1| hypothetical protein HMPREF0863_02284 - Prom 202738 - 202797 7.2 - Term 202869 - 202900 2.5 192 94 Tu 1 . - CDS 202908 - 204701 2004 ## COG0006 Xaa-Pro aminopeptidase - Prom 204725 - 204784 3.3 193 95 Op 1 . - CDS 204814 - 205245 430 ## - Term 205256 - 205290 1.2 194 95 Op 2 . - CDS 205295 - 206119 725 ## CPF_0493 signal peptidase I (EC:3.4.21.89) - Prom 206141 - 206200 4.9 - Term 206180 - 206206 -1.0 195 96 Tu 1 . - CDS 206221 - 206751 272 ## - Prom 206810 - 206869 6.7 196 97 Op 1 . - CDS 206887 - 207678 843 ## COG0583 Transcriptional regulator 197 97 Op 2 . - CDS 207682 - 207804 92 ## - Prom 207838 - 207897 3.8 198 98 Op 1 . - CDS 207901 - 208341 348 ## gi|293401249|ref|ZP_06645393.1| phenylacetic acid degradation-related protein 199 98 Op 2 . - CDS 208411 - 209061 329 ## 200 99 Tu 1 . - CDS 209314 - 210468 912 ## gi|293401245|ref|ZP_06645389.1| putative signal peptidase I - Prom 210558 - 210617 7.6 - Term 210627 - 210662 1.5 201 100 Op 1 . - CDS 210667 - 211155 290 ## 202 100 Op 2 . - CDS 211162 - 212034 853 ## COG1284 Uncharacterized conserved protein 203 100 Op 3 . - CDS 212031 - 213110 880 ## COG0787 Alanine racemase 204 100 Op 4 . - CDS 213179 - 214069 957 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 205 100 Op 5 9/0.000 - CDS 214086 - 214511 608 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 206 100 Op 6 . - CDS 214527 - 215003 675 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 207 100 Op 7 . - CDS 215008 - 215502 782 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 208 100 Op 8 . - CDS 215526 - 216113 851 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 209 100 Op 9 13/0.000 - CDS 216129 - 216374 369 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 210 100 Op 10 . - CDS 216378 - 217145 1069 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC - Prom 217197 - 217256 6.1 211 101 Tu 1 . + CDS 217543 - 219792 1945 ## Sterm_0952 hypothetical protein + Term 219940 - 219982 2.1 - Term 219802 - 219842 -0.4 212 102 Tu 1 . - CDS 219996 - 221456 1718 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - TRNA 221573 - 221648 75.7 # Gln CTG 0 0 Predicted protein(s) >gi|312955012|gb|AENW01000046.1| GENE 1 4 - 771 726 255 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0030 NR:ns ## KEGG: GALLO_0030 # Name: not_defined # Def: putative acetyltransferase, GNAT family # Organism: S.gallolyticus # Pathway: not_defined # 9 251 8 248 251 187 43.0 2e-46 MIYKLTHPERAGALFAQAQDTMILSCLQNVMGEIYADDPENPKSAMAVLGVFCFFAGEVN AELIAYKPDTYTIPFILMSADTSSLRAAIQAQYGERAKKVTRYAIKKEAGIFSEQRLQQI VDTLGAEYELNLIDEAIFNWSRRQDWCREWTSLYKDYETYRTTGLGVVVLKDKLPVSGAS SYSSYRGGIEIQVDTKKEYRRQGLAEAACAKLMLECLKRGWYPSWDAHNMASVHLAEKLG YHFDREYTVFEIHGY >gi|312955012|gb|AENW01000046.1| GENE 2 761 - 1750 877 329 aa, chain - ## HITS:1 COG:L194226 KEGG:ns NR:ns ## COG: L194226 COG0673 # Protein_GI_number: 15673536 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Lactococcus lactis # 2 315 1 319 324 148 30.0 1e-35 MVLHYGIIAVAAITDRFLHAVVEAGDTIEAIASRSLAKAQEKAEEYGVRKAYGAYEQVYT DPDVDIVYIAVNNANHGKEIKAALHHGKHVVCEKPIALSCEEARELFAFAKQKQLFLMEA QKSLFLPVTQDIRDILQRQTLGKLRQVVMSASFSNPAAAWMHDALQGGVVYGSASYTIEY LHYLLQPHTIHASAMGTQEAQGAIDRVSMNFLFDDVLVNSRISMKEETPQQALFYFDKGD IRIPNYWKAREYFIMLHGVEQRKKHPCVYEMKYEAAHIHACLENGLLESPIMDAKRSTVC CFLVDEIMRQLSSKEALYCIDEEESCYDL >gi|312955012|gb|AENW01000046.1| GENE 3 2847 - 4283 1696 478 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_0675 NR:ns ## KEGG: CDR20291_0675 # Name: not_defined # Def: putative lipoprotein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 474 1 485 486 381 40.0 1e-104 MKKIRLAAACILLLSAMVLQGCSGNDHGLDPDKPITLTLWHYYSGSQKQAFDELVDEFNE TQGKKQGISVDAVAKGSISNISADLKSSLEKKVNAPELPNIFAAYGDTAEDMEKAEKLVS INDYMSDEEMAEYVDDYMKDGSLHDHAYVNIFPIAKATEVMVINKNIWDEFAKKENVKLS DLDTWEGLARVSEKYYTYSGGKAFFARDALMNYLNAGSEQLGTPLFSITGHTGSFTVSRE TMRKLWDQYYVPFVKGYYAKNGRFASDDMKTEDVVACVSSSAGATFFPKEIVRDDGTGYA VEYIVRGVPNFEGKKSYAITQGAGMAVSKSDEAHEYASIQFLKWFTEKERNTLFSAGSSY LPVKKEANSFASWNTITEAEKVTANQLVRDIVKTSMETVSTSTLTSQKSFNGSYEIRNYL ETALNEKCAADARQIQQAVKNKDSREKAWKPYLSDENFNTWFEQITKDINEKMKDSDA >gi|312955012|gb|AENW01000046.1| GENE 4 4283 - 6661 2330 792 aa, chain + ## HITS:1 COG:mll7787_2 KEGG:ns NR:ns ## COG: mll7787_2 COG2199 # Protein_GI_number: 13476460 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Mesorhizobium loti # 543 716 2 174 180 99 35.0 4e-20 MQKNSLFRRLLITLTLTGAAICLIFMGTVFAGGTISNLKDISYHLFHQRVIFRVSDLQEI MATDLYQQDTYKELLQECEKVYHNAAAYQNSRELPASVLKQMDAFSKLKYITGSYVIFDK DVFHTDSYPAYYLTDGTPGDTYNDKSDIIARFGNASALKKAGYSLHSEWKTFMKLSEKDE NDGFYFRPYQAAVNNPREEIKSYGYWGTSIRMQDNETEFITYSFPLISSDHKVYGVAGVE ISLDFLKKYLPYEELNDDSSNAYLLACKNKNTDTYEIVYSNGPNYRSLFPIGKKFELEDA AGERGSTLTVNDRLLVMQQEQLHLYESNTPFVEQEWYLIGTLEYDALYSSAIRLQKTILW TMLGSILLAFIIALFTSMKFSHPIAQLAKVLKNFDPNDEMHLPRVKVLEVDELASSIEEL SRNLSTAESRLSQVIHALDMPIGAIEVYDSGLVYCTEEIPHLLCFHNRKRTSYTHKEFVQ EIEVFKKRIEIFEEKEEWQDGRQVHTYVISHQLDEHETWLRFILSQHEGTHVIVVMDVSD EIREKRKLTYERDHDVLTQFFNRRAFRSRVEAILSGDACGICAMILWDLDNLKVINDTYG HDAGDQLICATARYLQKLSSSRCIVSRMAGDEFLVFFHHYQKESEIRTIVEGMHRQINAH KITFTGKEEIRIRLSAGIAWYPKDAQDFDTLSKYADFAMYSIKSTQKGGIEEFQPSTYHK DKLLLSGRNELNEILDHNLVSYAYQPIVHLKSKEIYAFEALMRPRSTIITSPVDILRVAR SQSQLYRVEFMT >gi|312955012|gb|AENW01000046.1| GENE 5 6746 - 7213 512 155 aa, chain + ## HITS:1 COG:aq_083 KEGG:ns NR:ns ## COG: aq_083 COG2200 # Protein_GI_number: 15605680 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Aquifex aeolicus # 20 136 200 316 338 93 41.0 2e-19 MLDDLTQSLEQQYKEYLPLLVIEMIETDEIEQHYLETKQQFAKRWDAHIAIDDFGSGYSN DSTLLNVAANYIKIDMMFVRDIHKDENRQRLVENMITFAHRQHIRVIAEGVETKEELQQL IRMDVDFVQGYYLGKPALQISDICEADIRRKLSNL >gi|312955012|gb|AENW01000046.1| GENE 6 7525 - 9312 1719 595 aa, chain - ## HITS:1 COG:BH0220_1 KEGG:ns NR:ns ## COG: BH0220_1 COG3711 # Protein_GI_number: 15612783 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 1 463 3 495 556 78 22.0 3e-14 MNQRQRKLLLYLLSQKHYQPIQELCGEFGFSEKTIRNDIKAINAYLHMNEVTSRIQIKRG SGVRMHLMEREEEYVRYLLESRVLEIKPDLDRFYHGMILLLFRQEPYTMDTLADELYTNR LQLKEDLLCWESMLRMFHLKITKGTHLHIDGDERQLRLFVLYYFYQRADKAMIMSIEPVF LQEHQSLFRDILRLYEDAYRYRFTVNALHHFSIYLGVMMKRIQMGYGLQEQTPYVGNRRV HTMLQDYFHVDVNGEEMRFLEQLIESGARQWNRSMLHEFVVNEETRQLSARFFALLKQEY HGEPDEELPILFSILLQTAMTRKHHAMRVLHYNDTQVKFDSMAEFLSVMRLFHKDEKLRG LQLYESEYTRLSMLLLPYFHQLDMQVRFRAGMIVNCSLELAYYGRMRISEALPNIDIVRI LTEDEIDAAAAEVDFFITFDYLHKQVPNVEISSMIQDSDIQKLQLYLKQLRQQRSALQPI SCSMCAHHAADEDALVSYLFQCYQENCKTGTYEEFTAMLPMHRLLLRDCMLVVLYDERFS ESFISMIALKKQLYIEGKGIRQVCLAGFVHTSYERLQEQLMQLKECLRKQLPHLM >gi|312955012|gb|AENW01000046.1| GENE 7 9440 - 11038 2069 532 aa, chain + ## HITS:1 COG:MA2503 KEGG:ns NR:ns ## COG: MA2503 COG0477 # Protein_GI_number: 20091334 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Methanosarcina acetivorans str.C2A # 8 530 2 533 533 183 26.0 8e-46 METVLKQKKQMIYLPLIVLMFTQIGTSGDNAVLSVATNALISALHASMNDIQLANMVYSL CAGAFMVAGGMLGIIIGWKKNFRIGVILAIIGELMLAISTNVVMFTWGGRLLVGLGASFM IPSVLGLIPGIYSGKERVFAFGAIGAATGIAAAAGPIVAGFLLDAFGFRVAFGALAVYFF LILIGSTAIPEVERSTKKLKMDVRGTIVAAIGLFLFLIGISKISVWGLITPLQAPFTLFG ISPSLPLALLGVIILALLVVMEKSIEQKNGCALLPSSFLKSAQVRAGLFASAIVFLYLGG TVMLVNPYLQVVGGFNAVQTGVAMICVGAPMFAASMGVPKYAAQVHPKTILRIGYILLAV SVIPMAFSLQEHGVSIGMYIGLIIAGIGQGMLSAQASNVVALAVNERDAQQSGGIQATAR NVGQAIGVAVLGMVMIFTINANLGSSMEKDALLSASLVQQEEAKNVSFMSDEAFISSLSD LTMKPQEQQVLVRLNAQARMHSTQYALYVLGILSLVCIFSTGGITVTKKEQA >gi|312955012|gb|AENW01000046.1| GENE 8 11072 - 12652 1861 526 aa, chain + ## HITS:1 COG:MA0761 KEGG:ns NR:ns ## COG: MA0761 COG1574 # Protein_GI_number: 20089646 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Methanosarcina acetivorans str.C2A # 4 524 18 550 553 322 35.0 9e-88 MQKLYTNGTILTMKENELYSEALLIRDGSIQAVGTRKDLEPLCEADCERIDLQGACLMPS FIDAHSHMLQFANTLKFVPLKSCTCVADIQEEIKRYIEEKQLADGEWVMGFGYDHNALAE HRHPNCHELDAASRTHPIILAHSSFHMGVLNTMALQAYGLDDSVKNPEGGSYGRDEQGHL NGYMEEVTFMRGPGERVMSLENIDAYAVEAQKIYASFGITTAQEGFAHRSEVDIYERLGR SDQMLLDMVAYVDIAEDSEVVQQREDLKEYRNHFRIGGYKLFLDGSPQGKTAWMSKPYEN SGDYCGYPIYTDEQVDGYVQQALDEHRQLLVHCNGDAASQQMLNGYHHSRQKTTDTRPVM VHSQTLRPDQLPQLKETGVMPSYFVAHVYHWGDVHLVNFGKQRAENISCTASALKNHIPF TFHQDTPVILPDMLESVWAAVNRITKNGVVLGEQQRISVLEALKAVTINAAYQYFEEDRK GTLEAGKLADLVILNEDPLKAEPMKLRDIQVMETIKEGRTIYKKAA >gi|312955012|gb|AENW01000046.1| GENE 9 12881 - 13189 427 102 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAAIIFLALGALMLYFAVEIGMRRRIAFLHDYHYQNMKEEDITPYLHLMGVGLAVVGICF VCSAVILSCQKVFFLPVLFGGLLPGIGVMLYAQYRYNGGIFS >gi|312955012|gb|AENW01000046.1| GENE 10 13666 - 14076 527 136 aa, chain + ## HITS:1 COG:CAC3714 KEGG:ns NR:ns ## COG: CAC3714 COG0071 # Protein_GI_number: 15896945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Clostridium acetobutylicum # 25 131 42 147 151 72 42.0 3e-13 MRFLPDVFTDTFEDMWKDPFFTKSNSCMKTDVRELDGNYLLDMELPGYKKEDIHLDLKDG YLNITAAKNSSNEEKDDKGNIIRQERYSGSCARSFYVGNAIREEDIRASFDNGELKITFP KEESRKVEEKRFIPIE >gi|312955012|gb|AENW01000046.1| GENE 11 14157 - 15839 1371 560 aa, chain + ## HITS:1 COG:CAC2686 KEGG:ns NR:ns ## COG: CAC2686 COG0366 # Protein_GI_number: 15895944 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Clostridium acetobutylicum # 4 395 3 401 451 450 52.0 1e-126 MTSWIKEAVFYHIYPLGFVGAAQYHEEEITHSIKKVEDWIPHMKKLGVNALYLGPVFESH EHGYDTSDYRLLDHRLGTNDDFKRVCDSLHAADIRIVLDGVFNHVGRDFWAFRDVQEKKE KSTYCDWFSHLHFHARSPLNDDFTYDAWEGHYNLVKLNLENEEVVRYLLDSVAMWMDEFH IDGLRLDAADCIRPEFFRRLKAFCKEKNPDFWLMGEIIHGDYNRWANPDMLDSVTNYECY KGLYSSHNERNYFEIGYSLNRQFGNGGIYQGLDLYNFVDNHDVNRLASTVKNKEDLFNIY TILFTMPGIPSIYYGSEYAVEGRKHNGSDADIRPCLQLCEFDSEKLCEHLALLSFVHKMR ACSHGSYEQVLLRNEQFVFCRSCEQDSLYIACNVADADYEAVLPIPQGCWKDFLLGTTYR SEGGSLQLTIPAKSSCILYKDNESEQTVTEDCSISYGEAQDLMEEEQSAVYAVPIFVKPL KEAEGLPVEGMEVKPGKYRHFKGKCYSVLYVATHSETLERYVVYRQLYGNEEVWIRPLAM FCESILVDGVLTPRFTYIGK >gi|312955012|gb|AENW01000046.1| GENE 12 16008 - 17216 938 402 aa, chain - ## HITS:1 COG:no KEGG:CD2274 NR:ns ## KEGG: CD2274 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 4 373 7 382 417 215 32.0 2e-54 MSSFEELVRECDRLWLNCRCTRLRLTPVKKQVQKENRRKAVELKADWETFLQHAADNLED AGWKTEMDRRVLALLRSESVLNFAVLKPAVQEEFLSITKQFVRDAMCFDTALELDDIMQA MRNVWIILLLECMLERKLCYHKAIFAYSMLYPYTDNFLDDPAIDRQRKKVFNSWLSERLK GEQRPMDADLYRQVDALVSMIEDTFPRQQFPDVYDALLRIQEGQILSVQQDSRLCEEEIR RISIYKGGASVLADGYLMDGDLSEKEAFFCIAYGFLLQVADDIQDMEEDRILCQHTLASM LHGKRQRLRLAQRLHTYLHEVLFYHYPAKASAMQSFVEKNCRFLLIGSIAKQLHLFPKPF AYRMRRSLPLGLDAVTTLMNESSAMLQSEQIHAVIQAYVQAL >gi|312955012|gb|AENW01000046.1| GENE 13 17213 - 18070 889 285 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1272 NR:ns ## KEGG: Cphy_1272 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 156 282 159 286 288 68 28.0 2e-10 MKKHRGIRTLVVVSVVLMVLGSLCIGVGIAKGGDLRYLHVDKDTVDWWPFDGSFGIQLGD SFDFTSWEEEKHSYKERWDQSLQEVESLSLDVTLGDVRIERGKENKITFLDIRKEKVNIK QEKGNVTVTVDNPDISKGNRNRNDTIIVTLKDKQYERISVEDKLGDIQLKNLSAKHITIE EKLGDITLEHIVSKDLAIAQSAGDIEVDGQLYGNSVVKSSMGDITIHVRGDQKDYRYRVK NTMGDTQIQNREWELSCDAEEGNRSSDNYLQLHSSMGDIDLQFEG >gi|312955012|gb|AENW01000046.1| GENE 14 18057 - 18671 660 204 aa, chain - ## HITS:1 COG:SPy2173 KEGG:ns NR:ns ## COG: SPy2173 COG4709 # Protein_GI_number: 15675910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 184 1 180 195 83 33.0 2e-16 MKKAEYIAELKRRLANFSPSEVEDAVSYCEEYFEEAGDGNDQQVIDDLGTPAQFAAQLKA ERSIRQEQQHRNHRRGNNPNSSLKNAGMIILGICALPIALPLLFAAIAVMFALVITVFAL GVAGIVSFASILITGIPLMASAVTNYHTPSNAWIAAGGGFLCIGLGLLLSILFFSLIRTV LPAFTNALTRLYHKAQGGKRHEKA >gi|312955012|gb|AENW01000046.1| GENE 15 18658 - 18984 458 108 aa, chain - ## HITS:1 COG:SPy2172 KEGG:ns NR:ns ## COG: SPy2172 COG1695 # Protein_GI_number: 15675909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 107 1 107 108 96 39.0 1e-20 MTFQLGSALLDACVLATLHKEDTYGYRLTQEVKVVMSVSESTLYPVLRRLMREGYLETYD QQHMGRNRRYYRLTDAGRNKYREYVEEWKAFSTKISGILEGGKEHEEG >gi|312955012|gb|AENW01000046.1| GENE 16 19291 - 20106 709 271 aa, chain - ## HITS:1 COG:PA3882 KEGG:ns NR:ns ## COG: PA3882 COG0500 # Protein_GI_number: 15599077 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 21 180 7 158 249 64 30.0 2e-10 MRKGDAVVKITNKNIDAGNAFDWGRTSKDYAKYRDIYPSVFYEKIAERGLCVANQRVLDL GTGTGVLPRNMYTYGANWTGTDISQQQIEEAKALARQMNQNISYFCVSAEDISFTSHTFD VITACQCFWYFDYERLLPKLLQYLKPEGRLLFLYMAWLPQEDAIAGASEQLVLKYSPNWS GAREYMHPISLPDCVYEVFEPVAHEEYALDIPFTRESWNGRMKACRGVGASLSDQAMKAW EQEHLQLLKKNAPAAFNVKHYAAMLEMKRRT >gi|312955012|gb|AENW01000046.1| GENE 17 20912 - 21025 90 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEIGKKLKEARINSGLTQEQVAEDIKVTRQTISNWEK >gi|312955012|gb|AENW01000046.1| GENE 18 21114 - 21320 236 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|153853942|ref|ZP_01995275.1| ## NR: gi|153853942|ref|ZP_01995275.1| hypothetical protein DORLON_01266 [Dorea longicatena DSM 13814] # 1 68 80 147 147 84 64.0 3e-15 MIEHLEENTNIVKSNRKLIAAIMINVLLVILLVAFNMFLRDNQYYLIGVFCFAIISSAAL LYQIIKKL >gi|312955012|gb|AENW01000046.1| GENE 19 21330 - 21662 246 110 aa, chain + ## HITS:1 COG:no KEGG:Apre_1190 NR:ns ## KEGG: Apre_1190 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 100 5 100 115 75 44.0 4e-13 METKMMISAVISGAVLIVGALEMIYQIYHITVIDATARGLKHPKLWGFLAMNGNHTSGLL LYLIGRRNYPLIDLSPDSQSEIERRKKAAGIGLIFLVIGAIGLVISIMLF >gi|312955012|gb|AENW01000046.1| GENE 20 21944 - 22639 552 231 aa, chain - ## HITS:1 COG:no KEGG:SDEG_1340 NR:ns ## KEGG: SDEG_1340 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 9 231 36 255 257 213 50.0 5e-54 MHRRRAERENNQGYPETEKLLQLSNIFGVSVDYLLKDDTCKEGTEEKGYYVSKEMAQGFL MKESRVSRSVAVGFMFWALAGIPFCMFPNHSSWRLLGMGVFIFLGICAVVIGMFHDQDTY AVLKQEVLLFDYEYRKELCREYQVRRKKYGFVAVPCCILFVAGIVALAATKRGYLPWSEY HAFIFLGLAAGLLGFVYTAGMLDAYEQLVENEKYTGRLLFKLRKKIRTKID >gi|312955012|gb|AENW01000046.1| GENE 21 22534 - 22740 97 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLGEKLLKLRKEKGLSQEALAEQIKTTRQAFSKCTEGAQSGRIIRAIRKRKSCCSCQIY SECPWIIC >gi|312955012|gb|AENW01000046.1| GENE 22 22977 - 23342 419 121 aa, chain - ## HITS:1 COG:MA2818 KEGG:ns NR:ns ## COG: MA2818 COG3603 # Protein_GI_number: 20091642 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 1 120 6 131 135 90 41.0 8e-19 MELKKLDGSFSVCKVVDYSMVNLNSTYCFIGKTDEENSLVCLQEEVPENTIEREDHWKAF RIQGILDFSLIGILSEISTLLAKKSIGIFAISTYNTDYILMKEEQFENAVRILAEAGYRI L >gi|312955012|gb|AENW01000046.1| GENE 23 23371 - 23646 236 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160941403|ref|ZP_02088740.1| ## NR: gi|160941403|ref|ZP_02088740.1| hypothetical protein CLOBOL_06296 [Clostridium bolteae ATCC BAA-613] # 1 91 96 186 186 124 67.0 2e-27 MTEYGRRKIEEAKKNGQWDNAASPSAISEEQIAAVAALLKENAQAYTNFQKMPASVKKTY TRAYLDAKTEAGRSRRLAWMMDRLENNLKPM >gi|312955012|gb|AENW01000046.1| GENE 24 23504 - 23923 77 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225420184|ref|ZP_03762487.1| ## NR: gi|225420184|ref|ZP_03762487.1| hypothetical protein CLOSTASPAR_06527 [Clostridium asparagiforme DSM 15981] # 1 62 1 62 187 84 66.0 1e-15 MSELLRFETREAFREWLSENCRRREGVWLEFGKTKEVETLSANDALLEALCFGWIDGVMK YILQEVFCAAKSWQQMVTEKQGAGSGAGSMRCHDGIRTQENRRGEKERTVGQRRFSLCNQ RGTDCGSCCLVKGKCTGLY >gi|312955012|gb|AENW01000046.1| GENE 25 23963 - 24490 580 175 aa, chain - ## HITS:1 COG:CAC1007 KEGG:ns NR:ns ## COG: CAC1007 COG0454 # Protein_GI_number: 15894294 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 154 9 164 174 61 29.0 1e-09 MIIRKAVKQDLPQLQVMYEAIIAHMYAQQICIWDAVYPCICFPEDIKQERMYVLQKDARI LAAFALCEHNKGEQQVDWHLSGQKALYLDRLGVHVDAMGKGVGRAAIREAMRCAKERQAD VLRLFAVDSNTPAIRLYEKNGFIQAKGIYHEVIDDTLTLHELGFEKAITEKELPG >gi|312955012|gb|AENW01000046.1| GENE 26 24856 - 25989 966 377 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPQDTYDFNRIDLNEIYSLFHTKDERRLDSVKEFIEAENYMKAIHKLNEFSSSNEPAVIL KGILFLYLGDMQKAISLWKPYIKKNKAHPLMMRYYAIACHSSKKYKEAVRVFKTVYPTDT RKDEIVLSYAFSLKEVHKYKTARNLILPFYSSTVGDDLIAVIQNMEFTTLLLELDVLLQD EDSYSAHFAPYLSQLSSVMIFEDAKELLACNIVILSGYMSTRRCEWLAPHFYELVRLTDK NNYLKDTPYEIAVKRGYTSWESYFYQQDEQVPKPLKEIGLYPLEELEIDDEVSQSVICWN AAKLYQTQPECFRYMRSTYPHTWNKIEYIVDKFKSKPTDYQKQVEKKIMLYVDYSQQELH EELERRYKKAYKTEHDS >gi|312955012|gb|AENW01000046.1| GENE 27 26633 - 27391 908 252 aa, chain - ## HITS:1 COG:BS_yktC KEGG:ns NR:ns ## COG: BS_yktC COG0483 # Protein_GI_number: 16078531 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Bacillus subtilis # 4 252 6 261 265 138 32.0 1e-32 MQQDVIEFAIELVRDCGAQLRRVSEVTPEYKTDFQDLVTEYDRSIEEQIHNALKVKFPTH SFLGEESVRERGDHLWILDPIDGTTNFVSRHRDFAISLAYYHKQQPVFGIVYDVMRDELF LGVHGKGAWKNGERMAQLRKKEARECILDAGLHVLGYIKRTYGSDPLTMQDEFRAHRYLG CASLSIVQIAQGLSDLYLSAHVKCWDYAAAAIILEEVQGAYSIQNTFFTTTGTFAMFANR RSLITMVEKEYL >gi|312955012|gb|AENW01000046.1| GENE 28 27376 - 28197 610 273 aa, chain - ## HITS:1 COG:CAC1092 KEGG:ns NR:ns ## COG: CAC1092 COG0613 # Protein_GI_number: 15894377 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Clostridium acetobutylicum # 5 266 6 266 274 103 25.0 4e-22 MNRIDLHIHSVCSDSSLTVAQILSLAKESRMQMISITDHDTFAAYRHILYDMLPCTLIKG IEISAFDEVAQRQVHILGYGFGEDTPHVDALCEAILRQRRAISLWQVQQLIDHGYQISLK EVECMAQQSTAIYKQHIMDVMIRHGYSDTIYSDVYRKLFKSNGICVCPASFVSVEAAIRA IHKDQGIAVLAHPYTSRVTESIPEYVRIGLDGIETWHCSHGQKQVDDLHAIAKRYKLIET GGSDTHGRYGEEPVLGQVNPFMKDEDVSVCSRM >gi|312955012|gb|AENW01000046.1| GENE 29 28194 - 28895 257 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 230 1 215 245 103 31 6e-21 MQQQDLLVIENLEKSFTMHVSRREIHACRGISLHLAKGEFIGITGKSGSGKSTILKGIYR TNLPQKGRILYDSEKFGMLDLCQASERQMIYLRKQEIGYVSQFLRIMPRTTARQIIEQAV LEMGADEDTARRRAQHMLEHFELEPALWDMYPNTFSGGEKLRLNIAAAMVKKPRLLLLDE PTASLDHTSKQKVRDLIEQLKLEGTTMLGIFHDLEFMEGLCDREYNMQKGMMA >gi|312955012|gb|AENW01000046.1| GENE 30 28901 - 29509 472 202 aa, chain - ## HITS:1 COG:AGc291 KEGG:ns NR:ns ## COG: AGc291 COG0110 # Protein_GI_number: 15887529 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 199 8 203 205 171 45.0 9e-43 MLSREVTIEQDVELNQVSFSIYNKVGAHSVIENSSFGRYSYCEPYAMIQNTIIHSFVDIA RNVRIGATQHPLQRPTTHHITYRRRMYGVRDTDDEAFFEQRRSKLTEIGHDVWIGHGALI EAGVKVGDGAVIGSGAIVTHDVPPYAIVAGVPAKILRFRFDCEQIAALLDIAWWNWEDAV FRSRIDDFSLDIDIFIRKYRKG >gi|312955012|gb|AENW01000046.1| GENE 31 29512 - 30681 1016 389 aa, chain - ## HITS:1 COG:mlr2305 KEGG:ns NR:ns ## COG: mlr2305 COG3454 # Protein_GI_number: 13472113 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Mesorhizobium loti # 9 382 8 377 403 216 36.0 9e-56 MIAIINGNIVQEHGILKDHALLIEQERIYDIVPQAKLASMRIDEVYNAYGGYITPGFIDM HSDHIEAMAAPRPSSIMDMELAVYEFEKECCTHGITTMFHSVSIWEGVGASPMRRPELVR QLADIIEKSHTQLHLIHHRFHMRFEIDNQKQFPLMLDYLRQKRVHLISFMDHTPGQGQYR NIEVYKSYVRNARSMSEEEVAEEVARRMNSDKLTLENMQTAARLAKAQDISIASHDDDTI EKLDVVQKFGATISEFPITLEVAREAKKRGMYTVVGAPNILLGGSHSGNMNAADAIAQDA ADILCSDYYPASLLHAVFQMTKKGQRLEEMVNKVTIHPARATGIDRDYGSIEKGKKADLL IIRILPNELPAITEVFVDGMCIAQNHYRV >gi|312955012|gb|AENW01000046.1| GENE 32 30692 - 31534 365 280 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 34 279 26 265 329 145 34 2e-33 MDYNDVPLMRVSHLNKRFGEGCPHCRSHSVKLQGNYCPKCGTVYACRDISFDVYDGEILG VVGESGSGKSTMMQCLYFDQEVTGGSCTIRTYKNGAANIFELTAQQQRYIRNHVLGMVYQ NPYLGLKMNFSSMGNIAEKLIAAGKRNVKAMSERGEELLNAVKIPVHRMKEEPRKFSGGM QQRVQIAKALSNNPPILLLDEVTTGLDLSVQANVLDLIKKIQRELGVSMLVVSHDLGVIR MLADRTIVMLDGEIIEQGLTDQVMEDPQHPYTQQLVYSLL >gi|312955012|gb|AENW01000046.1| GENE 33 31534 - 32385 898 283 aa, chain - ## HITS:1 COG:mlr3346 KEGG:ns NR:ns ## COG: mlr3346 COG3627 # Protein_GI_number: 13472903 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Mesorhizobium loti # 6 275 7 275 299 322 56.0 5e-88 MMKKKYNFAFFDEGSKREIRRASLKAICIPGYQVPFASRELPIARGWGTGGLQLSLSLVG PRDIVKVIDQGSDESVNAISIKNLIRATTGVELTTHTALATLIQSRHRIPEVPLKKDQIL ILQVPTPEPLREYEPSERATRRLHAEKEYTGAWLLLFEQIMKYGRVTMGADHPVLVNDRY VTAPSPIPRFDNPKMMRSEALILLGAGREKKIYAIPPYTKVVSLDFDDHPFETEDFQGKC CRLCGASHVYLDEIIDETNGRVSYQCNDTSQCLERLNAKGREA >gi|312955012|gb|AENW01000046.1| GENE 34 32366 - 33478 1371 370 aa, chain - ## HITS:1 COG:all2222 KEGG:ns NR:ns ## COG: all2222 COG3626 # Protein_GI_number: 17229714 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Nostoc sp. PCC 7120 # 1 367 1 386 415 265 41.0 1e-70 MAYVAVKGGEQAIEESLRRLKYERVKKGAGAGVDQIEQGMRLLVDQVMSEGSLYAPSLAA LAIKQGEGSMEEAVFLLRSYRSTLPRRYYSHIIDSREMEVERRISAAFKDIPQGQLLGTS YDYVHRLLDFDLLQEREEELKQYVEAFLSEECTKEKTDLRLPRVSDYLRREGLLPPVEND NRAPKDATKQMLSFPTQRSERLQILSRGMTQAVTALGYASLRGYGVVHPTVGELRVGQLP ISVPDPLQPEREEDSYYIGEIKVTEVESLIPVTITDPNGEKELEFKVGYGITMGQNETKA IAMSILDTCLESEDKGFAVNDEEFVLYHIDAVEATGFISHLKLPHYVTFQSKLNSMRKTK KEQADDEKEI >gi|312955012|gb|AENW01000046.1| GENE 35 33483 - 34061 584 192 aa, chain - ## HITS:1 COG:SMb20760 KEGG:ns NR:ns ## COG: SMb20760 COG3625 # Protein_GI_number: 16265200 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Sinorhizobium meliloti # 4 191 14 199 200 65 30.0 5e-11 MNFDMVFDIQHAYRQVVHAFAYPGEIVSLKQEADRLEAGLPCRAATGVLLYMLLDADTSF HAVEEEQLTDSIARLTYCQSCSLETAAHVIVTGKHRDRLCEIMQKVQTGTLEDPHLGATL LVECDSLQEGDELILRGPGIPHAHTIASPLNSDWVEVRALVNEEFPLGFDMLLIDADANC MALPRTTQVERG >gi|312955012|gb|AENW01000046.1| GENE 36 34072 - 34494 454 140 aa, chain - ## HITS:1 COG:no KEGG:OB0968 NR:ns ## KEGG: OB0968 # Name: not_defined # Def: hypothetical protein # Organism: O.iheyensis # Pathway: not_defined # 1 140 1 140 141 96 40.0 3e-19 MKRKERTRILVHCSNEFLTQWAQYFEQQTQFHVIEEPKNALTMLRMRESAQHSLFYLGEV LVSETRVKCRDTIGIGLIQGNELEKSYALAVIDAACNAPLDGVDQLEKALTQEKQKQDAA HARHVAGILKTRVNFETMDV >gi|312955012|gb|AENW01000046.1| GENE 37 34694 - 35443 634 249 aa, chain - ## HITS:1 COG:MA0995 KEGG:ns NR:ns ## COG: MA0995 COG3910 # Protein_GI_number: 20089872 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Methanosarcina acetivorans str.C2A # 16 248 22 251 251 248 54.0 8e-66 MIKNRYISNVKMATPPAADSYLASLPAVRCLSSMGQLSFDAPVTFFVGENGTGKSTLLEA IAVSYGFNPEGGTRNFNFSTQDSHSSLYEHIQLGRDDYPKDGYFLRAESFYNLASNIDEL DQYPDRSRHIIDSYGGVSLHRQSHGESFLSLIHNRFGGNGLYLLDEPEAALSPSRILTLI AEVHELVQQNSQFLIATHSPMLMAYPYAKLLEFSEAGIQEVSYKDTEHYQLTRRFLEQPE RYLSYLLEE >gi|312955012|gb|AENW01000046.1| GENE 38 35728 - 36411 717 227 aa, chain - ## HITS:1 COG:CAC0965 KEGG:ns NR:ns ## COG: CAC0965 COG0204 # Protein_GI_number: 15894252 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Clostridium acetobutylicum # 38 203 47 214 241 102 34.0 8e-22 MYILRSLYLLWLIPRSWIDAVLVRKKPFAQRYACMKKWSERLLSHYRVTLDVQFQEQLPK DQPILFVCNHQSEFDMLLQMAVLDLPFTFISKKENEKVPYVAAWSKTLEVILFDREDRGS AIHMLREAARRLKAKDNLLIFPEGTRSKGGVMHPMQAGSMQPAFMAKACIVPIVLKNSYD YMDVMKHKGTFHIHILKPLYYEDYKPLKAEGVTVQLQEEMQRVLDEA >gi|312955012|gb|AENW01000046.1| GENE 39 36418 - 36756 609 112 aa, chain - ## HITS:1 COG:BH0518 KEGG:ns NR:ns ## COG: BH0518 COG0736 # Protein_GI_number: 15613081 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Bacillus halodurans # 1 105 1 110 119 73 42.0 1e-13 MLLGVGCDIVEIARIKRAMEKESFLRVLSEQERKLFDRIPKERRAEWLAGRFAAKEAVIK AVHKEKSYVLSAVEILADAAGAPTCYIAGLQVEVSISHEKEYAIAYAAAMKE >gi|312955012|gb|AENW01000046.1| GENE 40 36862 - 37296 766 144 aa, chain - ## HITS:1 COG:SA1901 KEGG:ns NR:ns ## COG: SA1901 COG0764 # Protein_GI_number: 15927673 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Staphylococcus aureus N315 # 2 143 4 146 146 157 56.0 5e-39 MIYNSDDIQKIIPHRYPFLLVDRIESIEGNKVVGIKCISANEMQFLGHFPQKAIMPGVLQ LEALAQTVAVMLLSKEENKGKIGLFAGINKARFKRQVIPGDVLKLEAEVTRERMGIAFVN AVASVDGEIALTAEMMFAVEDPKK >gi|312955012|gb|AENW01000046.1| GENE 41 37299 - 38537 1596 412 aa, chain - ## HITS:1 COG:CAC3573 KEGG:ns NR:ns ## COG: CAC3573 COG0304 # Protein_GI_number: 15896807 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Clostridium acetobutylicum # 1 411 1 411 411 430 54.0 1e-120 MKRRVVITGMGVVSPIGNDVEQVWDSVQHSRCGIDRITHFDAGDFRAKLAGEVRNLDMEQ YFTKRDLKFNDRFTQFTRIAAKQAYENSGLQDTEFNRDRFGVIIGSGIGGISTIEGASQT IESRGPSRISPYFIPMSLINLAAGSAAIDMDAHGNVSSVVTACAAATNAIGEAFHRIRDG YEDVMAAGGSEAAVTPVAMAGFASMRALHEGEDPNRASIPFDAERKGFVMGEGAGVLILE ELKHALARNAEIYGEVIGYGSTCDANHITAPLADGAQAARAMTMAIEDGAITAADVDYIN AHGTSTPLNDASETLAVKKAFGAAAMKPYVSSTKSMSGHLLGASGALEAIISTLAVKNGF VPATINYRHADPACDLNLVVNEGKQADIRIAMSNSLGFGGHNASILIRRWEK >gi|312955012|gb|AENW01000046.1| GENE 42 38538 - 39269 250 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 239 1 238 242 100 31 4e-20 MERKTAFISGASRGIGEAIAITLSKEYNVIINYAHSEEGARAVLAQCDPEGHHKMIQCDI SDGEQVKAVLEEIVKEYGHLDVVVNNAGITKDNLLLRMSDADFDDVIRVNLKGTYNCIRH VARIMMKQKSGAIVNMASVVGLCGNMGQANYAASKGGVIALTKSCAKELASRGIRVNAVA PGFIATAMTDKLADSVKESALASIPMKKFGAVQDVANVVKFLCSEDSTYITGQVIAVDGG MVM >gi|312955012|gb|AENW01000046.1| GENE 43 39274 - 40224 1007 316 aa, chain - ## HITS:1 COG:CAC3575 KEGG:ns NR:ns ## COG: CAC3575 COG0331 # Protein_GI_number: 15896809 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Clostridium acetobutylicum # 10 303 3 302 308 253 46.0 3e-67 MRGEMESGMKTAFLFSGQGAQYPGMGKDLYENYDSAKAVFDSIATDFDVKTLCFEGPKEQ LDDTQYAQVAIFAHAMAAAAVLQENGIHADVTAGLSLGEYSALCYADCFSVQAGAEILRE RGKLMANALPSGTSAMAAVLMLDKEAILNACEAVQEIGVCEIANYNCPGQIVITGEKAAV EACGKKCLEAGARRVIPLQVSGAFHSSLLQEAGKQLHQVLSAYELKTPRIPVLHNLTAGV ADRPLIDLLSEQISHSVLLEDTIRNMLADGVDTFIEVGPGKAVSGFVKKCAKGMDVNILH VEDAASLAETLDYMKG >gi|312955012|gb|AENW01000046.1| GENE 44 40297 - 41352 1206 351 aa, chain - ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 5 349 6 347 355 314 47.0 2e-85 MSKRIPIGSKYLEKPIIQGGMGVGVSLGNLAGAVMKEGGMGVISAAHPGYRKENFWKDPL ACNIEAVYEEAAKARAISGGRGLLGVNVMVASHHYEDYVKAAIGAGVDVIISGAGMPMNL PSVEGSDQVALAPIVSSGRAARLILKSWDRHYHRCPDFIVVEGSLAGGHLGFKKEELLSG KVKELSELVCEVLQEIQAYEELYQTSIPVFAAGGVYTREDIAALLNIGASGVQMATRFIA TTECDADLAFKQKIVNARKEDITLVASPAGLPGRAVMTAFMRNALKGRIAPKHCIGCMKP CVPASTPYCISDALVHSVEGDVENGLVFAGANAWRVTDIVSVHDLMAELCA >gi|312955012|gb|AENW01000046.1| GENE 45 41345 - 42295 1159 316 aa, chain - ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 5 301 8 304 310 328 58.0 6e-90 MLINELLGIKYPIFQGAMANIATPEFAAAVSNCGALGIIATGAMDEHQTREAIRTCKQLT DKPFGVNVMLMNPHTQAIMQVICEEQVAVVTTGAGNPGPYIPALKESGCKVIPVVASVAL ARRLEKSGVDAVIAEGGESGGHVGETTTMSLVPQVVDAVSIPVLAAGGIASGRQLNAALC LGAVGVQVGTCLLLAEECPIHENYKRAVMKAKDMDSVVTGRSTGTPVRILKNQMALQYLK LEQSGADKEEMEKLTLGGLRRAVQEGDMRHGSVMMGQVAGMCKDIRPLQDILDSLIHESE EEAVTLQQAVKELCYE >gi|312955012|gb|AENW01000046.1| GENE 46 42306 - 43280 1141 324 aa, chain - ## HITS:1 COG:CAC3578 KEGG:ns NR:ns ## COG: CAC3578 COG0332 # Protein_GI_number: 15896812 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Clostridium acetobutylicum # 1 318 1 317 325 316 49.0 3e-86 MKSCSIKGLGYALAKRRVTNEELSTFVDTNDEWISSRTGIRARYISEEENTSDLGARAAR MAIDKSGIDPKEIDLIITATFTPDQTTPSTACLIQEKLGLNNQHMMAFDLNAACSGFLYA LQSAHAMLAAGQVTCALIIGAEVISKQLDWNDRSTCIIFADGAGAAIVKQEDTNKRMLHF AGSMGDAAGVIHSDAPKPRPLFSEQPYQPSVVCMEGNATFRFAVKAMQEAIEDVLKQAGE RIEDIDWIVPHQANVRIINNVCKRMHIDKEHVYINIEEYGNTSAASIPLALGEMSEKGLL QPGMKIVLSGFGAGFTWAGCYIEL >gi|312955012|gb|AENW01000046.1| GENE 47 43267 - 44199 1210 310 aa, chain - ## HITS:1 COG:CAC3568 KEGG:ns NR:ns ## COG: CAC3568 COG0825 # Protein_GI_number: 15896802 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Clostridium acetobutylicum # 40 304 2 266 274 291 54.0 8e-79 MSIKEAESSIAVLEAELAKLDAMDPHADELRLQIDHLREEAMMQLDAWDTVYLARHPKRP KAADYIRALFPDFMELHGDRCYGDDAACQGGIATFHGRSVTVLTQSKGKTLEENMQRNFG MLHPEGYRKAIRLAKQAEKFHRPIITLVDTAGAYPGKGAEERGQAEAIAQCLAVFSEIRT PVLAIVLSEGGSGGALAFSVADHIMMLEHAIYSILSPEGFASILWKDESRAAEAAGVMEL TASDLKRKGIIDTIIAEPKGGAHICFDYVVEHLREQLENVLDDLCKKKEKVLLAKRYEKY RVMGANYEEL >gi|312955012|gb|AENW01000046.1| GENE 48 44196 - 45068 1060 290 aa, chain - ## HITS:1 COG:CAC3569 KEGG:ns NR:ns ## COG: CAC3569 COG0777 # Protein_GI_number: 15896803 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Clostridium acetobutylicum # 12 285 1 284 285 315 53.0 5e-86 MEQLFKVRKNRLDLFKKRRTLPVREPLEAPDNLYKSCPQCKESILFEDLMHNLYVCPHCG HHMKLTARERLRQIVDENSFTELDRRLFLKKEQLAFPGYEEKLSRLQKKTGLQEAVVCGA ASIGGFPCAITVMDSNFFMGSMGQIVGEKITRCIEYATKKKLPLLIFTTSGGARMQEGIL SLVQMAKTSAALAKHSDAGLLYISYLTHPTTGGVSASFAMLGDIILSEPDCLIGFAGKRV IASTVKEELPANFQKAEFLLEKGFVDAIVERKDSRDTLRRILKLHERRAS >gi|312955012|gb|AENW01000046.1| GENE 49 45052 - 46419 1565 455 aa, chain - ## HITS:1 COG:CAC3570 KEGG:ns NR:ns ## COG: CAC3570 COG0439 # Protein_GI_number: 15896804 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Clostridium acetobutylicum # 1 449 1 446 447 514 56.0 1e-145 MIRRLLIANRGEIAVRIIRTCKEMNIETVAVYSTADKEALHVQLADYAVCIGGPRANDSY LNMKNILSAACMTACDAIHPGFGFLSENAKFARLVLQCGLIFVGPNPDVIEQMGDKNNAR RCMMEAGVPVIPGSKDLLETVQDAAAMAEKIGYPVLIKASSGGGGRGMRRADCAEELADA FDTAKAEARANFGDDAVYMEKFIVEPKHVEVQLMADKHGNVVHLYERDCSCQRRNQKLLE EAPCHILEEDVREHLLRDAVRAAESVGYDSVGTIEFLLDARGEYYFMEMNTRIQVEHTIS EEICGIDLIKQQIRIADGHKLAYRQENIVCRGHAIECRINAENIKYNFAPSPGQVSFINF PLGRRVRIESAVYNDYNIPPYYDSMIAKIITYADTRLECIKRMRSALEELLIEGVETNIE FQYLLLHHPTFVGGRYDTGFMESFIKELKEDGTII >gi|312955012|gb|AENW01000046.1| GENE 50 46416 - 46880 455 154 aa, chain - ## HITS:1 COG:SPy1747 KEGG:ns NR:ns ## COG: SPy1747 COG0511 # Protein_GI_number: 15675596 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 150 1 165 166 90 38.0 8e-19 MNTDKIQDIIRVFEESGLHKMELEVDDMKIKMEKGAAADSRAVHMEPVITEPLPPVTAAP QTAPLPAVEVKKAAGTWVKAPLVGTYYNARSQGGTPFVEIGQQVKKGDVLCIIEAMKVMN EIPSPVDGIVQEILITNEAMVEFDQELIRIGEAA >gi|312955012|gb|AENW01000046.1| GENE 51 46936 - 47160 450 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402141|ref|ZP_06646280.1| ## NR: gi|293402141|ref|ZP_06646280.1| acyl carrier protein (ACP) [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 73 1 73 74 76 93.0 6e-13 MFEKVKEVLMEAINVDEDMIKLEANLKDDLGIDSLAAVELSLELETEFDVRIEDEELAKL VTVADIVSLLESKA >gi|312955012|gb|AENW01000046.1| GENE 52 47678 - 48715 1176 345 aa, chain + ## HITS:1 COG:CAC1513 KEGG:ns NR:ns ## COG: CAC1513 COG1145 # Protein_GI_number: 15894791 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 1 345 1 338 338 321 47.0 1e-87 MSFQLTLEEVNQVFDTLRQSYRIYAPKRLKNAGRYCNTDLIRYQEIRSMEEIEWEQRSDY SPKEVFYPINQTLFHFTEHYFLESQADEKDLLIFARSCDIHGIKRLDKIFLENGPQPDSY YKRMRDKVHFILMECPENGWESCACCSMGTNVTDEYDLAMRPLKDEGRVLVECRSEQLAR LFSAFEHAEFQPKFVRENKTTIQVPDIREDMVDSIRTLDMWKDYQSRCIGCGACNSVCIT CSCFNTVDTPYTENGKSGERRRTWTGCMNDDFTTVNGGHAFRDEYKDRMRFKTMHKVYDF KKRFATDYQMCVGCGRCDDICPSYISFTHIIQRLHDEVEHMKEEK >gi|312955012|gb|AENW01000046.1| GENE 53 48717 - 49517 855 266 aa, chain + ## HITS:1 COG:CAC1514 KEGG:ns NR:ns ## COG: CAC1514 COG0543 # Protein_GI_number: 15894792 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 3 266 4 264 264 259 44.0 3e-69 MNNPWLPQKHRILNIIEETDLESTFVVEFRDPQIRHGQFFQLSLPKIGEAPISVSSFTDS TVEFTIRRVGTLTNVLFDLHAGDDIYIRGPYGNGFPLEEFKGKHIAVIAGGTGVSPVRST LHHYLNNPQDCRDVYVIAGFRDAQHVLFENDLRQWRQAKHFHTTLTLDHGEREGFQEGFA MNYVKDIPFQDFGEEYAVIIVGPPVMMKFTAQECMKYGVTEDHIYVSFERKMSCALGKCG HCKINETYVCLEGPVFPYTKAKGLVD >gi|312955012|gb|AENW01000046.1| GENE 54 49530 - 50534 1268 334 aa, chain + ## HITS:1 COG:STM2550 KEGG:ns NR:ns ## COG: STM2550 COG2221 # Protein_GI_number: 16765870 # Func_class: C Energy production and conversion # Function: Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits # Organism: Salmonella typhimurium LT2 # 1 332 1 334 337 346 48.0 5e-95 MSQDMNINALRTNCFRQSKVKGEYMLQMRVPGGLIQAKYLSFVEHLAEAYGDGTFHFGSR QCFAIPGIKYENIDAVNKELKDYLEDVEIAQCGVKMETDAGFPTIGARNVMACIGGIHCI KANINTQDMAKKIEQEVFPSHYHIKAAVAGCPNDCAKGHFNDFGIIGLTKPTYHSDLCIG CGSCVKACESHATRVLSLKNGKIEKDTCCCVGCGECTLVCPTNAMQRSPKPFYRILIGGR TGKQYPRMGKTFADFLSEDAVLAILRNWQDFSAEVLKGQPRYLHGGHLIDMAGYETFKEL MLKEVKLNPEARIAENLYFAETEYRGRIHVKPVK >gi|312955012|gb|AENW01000046.1| GENE 55 50715 - 51083 481 122 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRSDFFTMENGILHITSNAHTYPLSTLIRTELLLRPLSHNNLNTILNGTLFSGNGYEPL NIYLRLQFQDGTNEDMLLTPKPVIRHNLDYYEIVRRGRKLQEILNYWLREIEATGKPAAQ PL >gi|312955012|gb|AENW01000046.1| GENE 56 51341 - 52594 571 417 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 47 394 61 410 425 224 40 2e-57 MQQVIIVLADTTEQAEKNEEFIELVQAADMEIKETFTQNLKSITLRTYIGTGKCEEIHAY LQEQEIQRVVFNHDLSPLQIRNLEEILQTPVMDRTELILAIFESRAVTRTARLQIECAQL KKLLPRLIGANTQLGRQSGSGKNKGAGEKQLELDRRRINARIQELQRELKKIEAQRFNQR RARQKSMLPLVSLVGYTNAGKSTIMNMLLEHSSPYEEDKKVLEKDMLFATLDTSIRHIDL PDGKSFLLSDTVGFVSNLPHDLVEAFHSTLEEVQYASLLVQVVDVSSEEYARQMEITQET LQQIKAADIPMITVYNKCDQSGYQYPQVHAHDLYMSAKEKAGLQELLDLIHSHLYPDEKH VELHIPYQQTGIYSLLMKHAHVISRRDEEDGIHLDAVLSDTLYQKYRNYVICLKEEG >gi|312955012|gb|AENW01000046.1| GENE 57 52806 - 54023 1510 405 aa, chain - ## HITS:1 COG:VC2033_2 KEGG:ns NR:ns ## COG: VC2033_2 COG1454 # Protein_GI_number: 15642035 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Vibrio cholerae # 6 399 6 411 443 314 41.0 2e-85 MQRFTLPRDMYHGKGALEALKTLEGKKAIVCVGGGSMRRGGFLDRAVAYLKEAGMEVRLF EGIESDPSVETVMRGADEMLAFEPDWIVAMGGGSPIDAAKAMWIKYEYPEITFEDMCKVF GIPKLRRKAQFCAISSTSGTATEVTAFSIITDYQKGIKYPIADFEITPDVAIVDPDLVTT MPIKLVAHTGMDAMTHAVEAYVSTANSNFTDPLAIHAIEMIKEHLVKSYNGDMDSRAAMH DAQCLAGQAFSNALLGIVHSMAHKTGAVFADQGAHIIHGAANAMYLPKVIKFNAKDETAR KRYGVIADYMHLGGSSDEEKVDLLIAYLREMSDALHIPHCIAHYGKDGLPAEEGFVSEDV FLARVEDIAANAILDACTGSNPRQPSQEEMVKLLKCCYYDTEVDF >gi|312955012|gb|AENW01000046.1| GENE 58 54367 - 55896 591 509 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225093729|ref|YP_002662469.1| ribosomal protein S15 [gamma proteobacterium HTCC5015] # 27 480 32 471 497 232 32 1e-59 MEIVNTEDMRKMDAEAIHEYGIPGIILMEHAAMAVMDYIREHVAKDSRIMILCGPGNNGG DGFALARLMVEEGYSHVRIHCSVPYDRMSHDEAVYARIAESYGIEIMRTQDMEMIKPALD EAQVVVDALFGTGLSRNIEGFYDVLILYLNLLNKHVISIDIASGVNGDTGSIMNCAVQSD VTITFECLKRGQLLYPGSSYCKDIIVKNITLPKAVKANIEHSIHLLDEDTVRAFLPKRDA HSHKGSFGRVMMVGGSSYMHGAITLAAKAALQSGTGTLTLFLPDCISEIISMKLEESMLL PAPSMNGSFSMISVDLLKRNLDAYDMITIGNGMGRGEVTQAMVRAVLESDRPCLLDGDAL YEAGKLIELLHRPAVTILTPHPKEMSYLCGCSVKEVLKDPLKCAMEFVKRYENTVLVLKD QHTIICRKDDMYMNTAGNHALAKGGSGDVLCGILTGLYAQGKEALQAAAAAVYVHACAAD ELIQRMDAYSIQPGDLIAVLSDTYGKLKR >gi|312955012|gb|AENW01000046.1| GENE 59 56097 - 57299 1267 400 aa, chain + ## HITS:1 COG:CAC1720 KEGG:ns NR:ns ## COG: CAC1720 COG0452 # Protein_GI_number: 15894997 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Clostridium acetobutylicum # 3 397 4 397 398 363 50.0 1e-100 MKKTVVLGVSGGIAAFKAAQLTSNLIKKGYDVEVIMTQNATEFITPLTFESLTKHNVMVS TFEKVADRSVKHISIAHRADIFVLVPATANVIAKIVHGLADDMLTTTFLAADCPKVICPA MNTGMYENPVTQKNLEAAKALGYELVEPEVGYLACGDTGKGKLADITHIEECICRILETT GLLRGKRVLVTAGPTREALDPVRFISNHSSGKMGYEIARAARDMGAYVTLISGPVQLNVP HGVRVVQVVSAQDMFEAVQQEYADCDIIIKAAAVGDYRAQKTEENKIKKQGEFLEITFVK NPDILAWLGEHRVSNQIICGFAMETEHLLEHAAEKLNRKNCDMIVANNLHEQGAGFQGDT NVVTLLQKNHTETLDLMSKYEVGVEILTRLAALSKERGEA >gi|312955012|gb|AENW01000046.1| GENE 60 57299 - 58078 1009 259 aa, chain + ## HITS:1 COG:lin0253 KEGG:ns NR:ns ## COG: lin0253 COG1521 # Protein_GI_number: 16799330 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Listeria innocua # 1 257 1 259 259 250 47.0 2e-66 MLVVIDIGNTNITIGIYHGDKLIGNYRLTTKMKRTSDEYGFMVMNFLNASKVQPADIKDV IVSSVVPKIMHSFLNGIRKYMHKEPILVGPGIKTGISVKAENPKAVGADRIVDAAGAYYE YGGPCLVVDYGTATTFDYVDANGNFEYGVITLGIETGAQAMWTQAAKLPEIEIKKPASIL AKTTTTSMQAGLVYGYIGQSEYIIKEFKKALGVDMKVIATGGLGKIIYKNTDEIDIYDRN LTFKGLKYIYEKYTTEKKK >gi|312955012|gb|AENW01000046.1| GENE 61 58343 - 58804 640 153 aa, chain - ## HITS:1 COG:SPBC1271.07c KEGG:ns NR:ns ## COG: SPBC1271.07c COG0454 # Protein_GI_number: 19111935 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Schizosaccharomyces pombe # 10 149 18 158 163 127 45.0 6e-30 MHMIDGTTCLMEVEQLIREYTQMLGRDLSFQKLEEELRDLLRKYSGTEGRLLAAVADDGC VSGCVAYHRLSKECCEMKRLYVKPSYQGQGIGQKLVETLLLLAKDDGYSCMVLDTIEPLQ SAIRLYKGLGFQETEPYYDNPMEDVIYMKKLLK >gi|312955012|gb|AENW01000046.1| GENE 62 58975 - 60621 1468 548 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2076 NR:ns ## KEGG: CLL_A2076 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 545 3 555 558 405 42.0 1e-111 MKRLPIGVEDFKKMIDKNFYYIDKTDFINDVLHEEVVLYTRPRRFGKTLNMSTLYYFFSI KQKENAYLFNGLNIMKRRDAVEHLNKYPVIMISLKEMKQTTFEKQLEMYSVFIRDIIRRN QELLESEQINAIDKELLTAYYMGTKNEVSLQTALKFLCECLQQHYHQNVILLIDEYDVPL QSAYLHGYYDQMVEFLRNVFSAALKTNDALEKGVLTGCLRIAKESIFTGLNNFKVNSIFD GDENQQFGFMQNEIDILLEKYDALEYRYNIKEWYDGYQFGGCDVYNPWSVLMYMDRLTNS NNKSPESFWANTSGNDVIYRFIQQGNAEMKQDFDILSSGGMIEKTIKPELTYRELDDTDN LYSFLLFTGYLKAISKTDTNTYQLMIPNKEIQYIYTTIFEEWFKQQIKSYQASFLEALLQ EHVEEANEILNTVLFQSMSYFDYDEKYYHGFLNGMLQGKGSYRIVSNQESGFGRCDLAVL PAYNKNRGLLLELKVAKREEDVEKSAEVAIQQIKEKQYIEGLHRKGYTDILGYGIAFYKK TCTIKRVK >gi|312955012|gb|AENW01000046.1| GENE 63 60849 - 62009 639 386 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_4021 NR:ns ## KEGG: Dhaf_4021 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 380 1 389 393 244 37.0 4e-63 MRTITREEVRSHLFQAHHLVTPADSLPEAAGVCGFQNSPPGTWLCAAFNRLRSCSAWQLQ QELDEGRGIMQAWSLRGAPWIFPLHDAAVYLDALCAEEGESWIYTNGLRCCQKEIGVPFS VLLQELMQCLQVLEKEPVVSKQRLDQVLAAAMLQRIPASLHSLWLSASPFAKGQLYGEAI VSFLLRPASFQRGIAFGPRQKGSPTFAAFPNAASKTGGISDAACCALVCRFLHAYGPGDV KGFAKWTGMELPQARRLWALSEHERVSVRYQEREYSIWNKDTYEKQQTDEAVRLLSPHDP FLDLWDRSLLLEDCKLQHMVWKTVQNPGVVIQCGRICGIWRSKKRKTVNELHITLFTDID TKSLHIWIQAYEQFLGQRILVEISRL >gi|312955012|gb|AENW01000046.1| GENE 64 62045 - 62911 1078 288 aa, chain - ## HITS:1 COG:BS_yitT KEGG:ns NR:ns ## COG: BS_yitT COG1284 # Protein_GI_number: 16078176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 13 286 12 279 280 151 34.0 2e-36 MKLQKIMYDYVYVVIGGFLFAVGLNLFIVPLDLYSGGVIGMAQIIRTVLAQYAHMDFGQL DIAGIINFLMNVPLFILAYRSISRKFFVKTLLCVLTQTVAFTIVMIPSTPILDDVLAACL IGGLICGFGIGLALRSGGSGGGLDILGVYFTKKFSDFSVGRLSNIINVLVFGVCAILFNV TTAIYSIIYTACMYLVVDKTHYQNINMTAMIFTKEEEVQESIMKEMGRGVTYWKGAGAYT KTDTHILVTVISKYEVTQLKKIIYKIDPRAFVIFNEGMSISGNFEKRL >gi|312955012|gb|AENW01000046.1| GENE 65 62986 - 63621 508 211 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1284 NR:ns ## KEGG: Cphy_1284 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 9 204 5 206 211 96 28.0 7e-19 MNTDHMNTTIEGIGSISGGKYGRIDIEGVGSINGDLEFEVLSIEGTCKCSGNLKGGTMDV QGVMTCKKDIRVRRLDIEGVVKSDGIRVYADEIYVEGVLNNKGEVNADKVRIEGCASLND LFGDDIRINYGHGQHIFHGLFGFRPEKRNTARNIECSQLTACNMSCHSISATEIHLSSHC RVDHITCDGKLVYDSTCRIGSIDGDCEKIVK >gi|312955012|gb|AENW01000046.1| GENE 66 63590 - 63946 394 118 aa, chain - ## HITS:1 COG:no KEGG:Cphy_0452 NR:ns ## KEGG: Cphy_0452 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 2 101 1 100 222 72 31.0 4e-12 MMTYRVKRILWGLVFVAIGIGYLGTQLDWWDFTIFFPGWWTMLLILPALYSMLDHGLHFY NIFTVLAGCYFLADANAWIDVKLTYPVWMAIICIAIGLRLLCTRRVRWYEYRSHEYND >gi|312955012|gb|AENW01000046.1| GENE 67 63943 - 64596 943 217 aa, chain - ## HITS:1 COG:no KEGG:BBR47_55250 NR:ns ## KEGG: BBR47_55250 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 3 202 9 209 210 118 34.0 1e-25 MEISKKDLLKTTGISYGQLYRWKREGLIPEEWFVKRSSPTGQETYFPQEKILKRIHAIQQ LKDSYSLEELARILTPEVSNRLFCEEDLEHFDELDIDVAADFMDAMSKDSFVFLEVLVMI ALSQAMVDSAITEEERTHAVSFLSKRMSELHSADYVLELLQAQGHLYVLLKKEGSEVYLD DGLVAIRFIHLNELSNAIKLKYKETFQFTFDEEEMRS >gi|312955012|gb|AENW01000046.1| GENE 68 64815 - 65396 656 193 aa, chain + ## HITS:1 COG:mll4816 KEGG:ns NR:ns ## COG: mll4816 COG1309 # Protein_GI_number: 13474033 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 7 73 33 102 244 58 42.0 8e-09 MEESVSKRSRIQDAAVALFHEQGVEATSVNEIVRRANVAKGTFYVYYKDKKELISQILTK QHGCLMNDILNHSYEAALANSTCWKRTFIDELITYYIQHPKLLRTIQKNIASILDTKEHR DMVFTHIERMPDFLKLLRREQETEKKALNRFLMMMEIIGFVCYNAIFFEQPDSIEEILPE LRETMFKMLERKE >gi|312955012|gb|AENW01000046.1| GENE 69 65400 - 68330 3244 976 aa, chain + ## HITS:1 COG:FN1139_1 KEGG:ns NR:ns ## COG: FN1139_1 COG1924 # Protein_GI_number: 19704474 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Fusobacterium nucleatum # 1 642 1 640 640 837 63.0 0 MTYKLGIDVGSTTLKAVVLNDQDEIVYKSYERHKSKVREMSVSKLKELHELLQGQRIALA ITGSAGLGIADDAGFPFVQEVFATAQAVRKYYPASDVVIELGGEDAKIIFLQGTLEERMN STCAGGTGAFIDQMATLLDVDLETMDQLSLQHTTLYPIASRCGVFAKSDVQPLINQGCEK SNLAASIFQAVVDQSIAGLAQGRNIEGNVLFLGGPLHFLKGLQERFKETLKLRDQEANFP ELAPYFVALGSAVYAANEAVDFSYEELLEKMEAMAAKKIQTQGLPPLFESDEDYEEFKKR HTSASVERSDIHTYRGNAYLGIDAGSTTTKLVLIDEQCRILYESYAGNMGNPVDVVQKEL AKLYALMEDRIHIIHSAVTGYGEELMKHAFHLDIGVVETIAHYHAAHYFNPQVDFIIDIG GQDMKCFRIRDHTIDDILLNEACSSGCGSFIETFAKSMGYDIEEFARMGLSGKHPVDLGT RCTVFMNSSVKQAQKNGASMEDISAGLCMSVVKNALYKVIRAKSPDDIGKQIVVQGGTFL NDTVLRSFELELGRNVIRPSISHLMGAYGAALIAKEKKATASSLLKKEDIDSFTHSSKAF HCALCTNHCNLTVNTFADGAKHIAGNKCERPVTGKVNKEKLPNLYDYKYDELLKLKGVPG IRGKIGIPLVLNLYDNLPFWHSFFTNLGYEVILSDRSSKALYSLGQHTIPSDTICYPAKL VHGHIQSLIDKGLQTIFYPCMTYNVNEDMGDNHFNCPVVAYYPEVVEGNMNLEHVKFLYP YVYLEDKRIFDQKMFEYFKARQMDIPFKDVQAASNHAYFAYQQFKDRVQEEGRNAIAFAR RNHRDVIVLAGRPYHVDPQINHGIHRLLNNLGFVVISEDSIAKQAVLPSVHVLNQWTFHS RMYNAAQYVAQQEHMELIQLVSFGCGIDAITADEVKDILRSNGKLYTQIKIDEVDNLGAV KIRCRSLQAAMEEREG >gi|312955012|gb|AENW01000046.1| GENE 70 68333 - 69631 1462 432 aa, chain + ## HITS:1 COG:FN1140 KEGG:ns NR:ns ## COG: FN1140 COG3581 # Protein_GI_number: 19704475 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 10 407 1 399 407 442 53.0 1e-124 MSHVEFTKEMKKTHTILVPMMLPIHFQFLRNILCKEGYRVEILKTEGQQIIDEGLKNVHN DTCYPALLVIGQMIDALKSGKYDTAHIALAITQTGGGCRASNYIHLLRKALVQAGFEHVP VISVNFSQLEKNSGFKLTPKMLLRLLYAFLYGDMLMWIKNQCKSYELEKGSTDALVTTWI DTITAQFDSLSYMRMKHNYQEMLHDFAALPRSQKPKIQVGIVGEIYMKYAPLGNNELEDF LIREGCEPVVSGVLDFGLYCLENSLIDHAYYGRNKKSYRFIQMADKLIQNMQKKAITAIQ KQGTFRAPDTFQEVIENSEGIINRGTKMGEGWLLTSEMVTLIKNGVHNIVCCQPFGCLPN HIVAKGMTRKIKDKYPMANIVAVDYDPSATKVNQENRLKLMLSNARLSERFAKEDEEALA SERQRKLASSRS >gi|312955012|gb|AENW01000046.1| GENE 71 69941 - 70126 204 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVTIAILLLVYYGMRKEIYERTTAYAQMAEKDDELIGKWCGCIMMVCAAAYQLYLEYLE C >gi|312955012|gb|AENW01000046.1| GENE 72 70500 - 71168 594 222 aa, chain - ## HITS:1 COG:lin1190 KEGG:ns NR:ns ## COG: lin1190 COG0692 # Protein_GI_number: 16800259 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Listeria innocua # 1 221 1 221 224 329 68.0 3e-90 MVQIGNDWDELLKDEFQKEYYQKLRVFLAREYKTQTIYPGMYDIFNALRYTAYQDVKVVI LGQDPYHGPGQAHGLCFSVKKGVNPPPSLVNIYQELHDDLGCSIPPHGELTKWTKEGVLL LNTVLTVRRGQANSHRGKGWEILTDEIIRKLNEREKPIVFLLWGRNAKEKSTLITNPAHL ILSCPHPSPFSADYGFFGCRHFSKTNAFLQEHGQQPIDWQID >gi|312955012|gb|AENW01000046.1| GENE 73 71353 - 73071 1240 572 aa, chain - ## HITS:1 COG:alr1230_2 KEGG:ns NR:ns ## COG: alr1230_2 COG2200 # Protein_GI_number: 17228725 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Nostoc sp. PCC 7120 # 320 571 4 258 266 157 35.0 4e-38 MSRKQAKLEKLSIELIRLYFEEHDFELLKEYLSNEISMMGEHRSALCHGMQEVERALQEV SIIYGEMVHLQDVYCEIIYQKQDIAVVAFTCIQHALGSGLLCRLKVSLVWEMEAGGWKIR HIHQSLSDDATERENPGIHHNAAKLPVYNQHCDALTQIFNLEGFVEAARELLQHTNQQYA LFKFGISDFRFINQIHGYAFGDDVLKSIARNLQSFCQKDELCARIEKDTFAALLRFTSID DFYNRLHCIRKHLLDEPIVSCLKHTLQYIGGVYLIQDACGESIKSMLDKAVLAMQYVERN SRVSDFVYFEDWMLEQKNRRSELLEEAVKAIQEDTFQLFIQPQFLISDGSVVSGEALSRW FLKDGSCVSPDEFIPLFEKHGVISGFDFYVLHKLCKFMRTCLDEGKELLPISINQSRLHI KERQYLRRFCEIVDSYAIPHEKLVFELTESAFTDNANDLQVFMKDIHDAGFQIAIDDFGT GYAGIGMLSQVDADILKLDKGMLNGINTDRRQMTIFWKIIEMAHSIGMQVICEGIETREQ YADLRMLRCDIGQGFLVSRAIAATEFAEKYLR >gi|312955012|gb|AENW01000046.1| GENE 74 73537 - 75456 1674 639 aa, chain - ## HITS:1 COG:ECs1044 KEGG:ns NR:ns ## COG: ECs1044 COG1289 # Protein_GI_number: 15830298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 327 425 382 480 720 61 32.0 6e-09 MKPDVLYQTAKRKILDALPDILFFLFLFYAILVLFGVQYVIVVSFVTLLYKIRRKRKQTP RRLCIMFFVQMALSILAFLASHSLLACVLLNIAVPFLLVFLQSSQFNQKGYMASAMGFVF LQLRPIPYTDFMTYLLVMACSLGFAVCCLQLSSYGHRREDDYALARKGIALLQEQMDAYL KQKTDQQRKEELVNIQRLLYKQAYQSRGFTYIATKEGRLRYLFALLLQRSSYFLENMDNI PVCSEQQQVLLQRCMQFLKHAENFNCTDNSMLLEEGQKLFTACRKKQDAVSLFLHNFLQL FLQILKDLQDNKKEAVHREWKLPEERKLRNRLRMDSFEFRFASRLSLVLLCGFLFARLSK LDHSYWLVLNAFLLLQPMYEESAYRLKTRFIGTVFGCTVIYLVLPHFPGVAGHFLFASIV VSLMYCATPGTWIQAMFSTCFAITLTSLAMRETIAIEMRLTYVAVAILLVLIVNRFFFPT SRSGLFQANMKRMFHMQHSYLRILQGSLHAPLDYGIIMDALTSFHMVYDQILEYLQGSSE NIELYRHLLSAFWHMSVEMEQMIFTVQHDTLTEDQEQSVEQFIHMCDAMIQSCEVGKTVQ KEKRAFLTEDVSDNELFQLMQRYNRHASDISSICLSRQL >gi|312955012|gb|AENW01000046.1| GENE 75 75801 - 77552 2021 583 aa, chain - ## HITS:1 COG:CAC3012 KEGG:ns NR:ns ## COG: CAC3012 COG0488 # Protein_GI_number: 15896264 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 2 580 3 632 632 469 42.0 1e-132 MLISVEHLSKRQNIKEIVNDVSFAIEDRDKIALIGVNGTGKTTLLRMLAGLETYEEGSIT KKSGLRVSYLPQDPVFDEDDTILHQILSMDKEIQEFEAKSILGKLGISDSSLNISHLSGG QRKRVALARALLKPCDLLILDEPTNHLDNEMIEWLEAYLIRYAHALIMVTHDRYFLERVC NTMMEIDRGSMYTYHANYSTYLQEKAERESIQAAQEKKRQSILRKELAWMRAGVQARGTK SRERIERFHKLNDMESVKEQGQVVLDTITSRLGRKTIEIDAISKAYGSHVLFQNLIYTLT RNDRIGILGPNGCGKSTLLHVLAKDIEPDQGSVVLGETVKLAYFRQGCEEMDMSQKVIDY IRDSGNEIRTLEGTYSASQMLERFLFDSRMQHTPIGRLSGGERRRLYLLKILMQAPNILF LDEPTNDLDIQTLQILEDYLDNFNGAVIVVSHDRYFLDRICDKLFVFQNGNVQQFIGGYS AYMELGTAKEKKEKKKVERVSQQQLRMSSKEKQELEHMEEDIAALQEQLEHLDIEMNAAG DDFKKIQELADQRDILEQSIEEKMERWMFLEDKKQEIENAKGK >gi|312955012|gb|AENW01000046.1| GENE 76 77714 - 78628 1032 304 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 42 208 82 254 387 63 29.0 5e-10 MLNKKRVLASEDILRYGRSEDPFDHMPSLEEWLLYFLEHFVKLNAKPNTYASFRSYIYSH ICPLLDDYPLNEITEPILQAYVNIKHENGRLDGKGGLGVKTLKEHIMVLKLSFKRVIQLG IVSYDPCRCVEYPKEAKKEVRVLSVQEQKRQTAAITPVYKENSLLTVLIAIHAGLRIGEV SALRIEDICLSRRLIEVDESLNRVMTYNEDGTVSCPLVYQTTKSSRVRKVPMNEELYEGI VKALEKKKEGAGSYGRPRASLPEDFREQVEYCQKNHIPLETYRRRTSLKKATFYKYVKVL QDAD >gi|312955012|gb|AENW01000046.1| GENE 77 79081 - 80409 1298 442 aa, chain - ## HITS:1 COG:SP1402_1 KEGG:ns NR:ns ## COG: SP1402_1 COG0144 # Protein_GI_number: 15901256 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pneumoniae TIGR4 # 3 293 5 280 280 188 39.0 2e-47 MNEQFLKRMQGYLQEEYEKYLKTLDEDAYRGLRVNTAKLSVDQFHDLKVCASQPSSICPE SFYIPKDIKGLGNHPAHLAGLFYMQEPSAASAVEVLDVQRNDWVLDMCAAPGGKSTQIAA KLQDRGFLVSNEIESRRAQILLSNMERLGFSRCMITNTRPQQIAKEMSGWFDRVLVDAPC SGEGMFKKHSKAMDDWSEEHVLACAQRQLHILDSAYAALKEDGTLVYSTCTYSMEENEQV VYAFMKQHPDMELVDCGVTFGRRGLPYLDLDTEKLRRIFPMDQGEGHFVAKFRKHGVQAE SRKREEKPAVIPVFATQFIRQSLQEQPAFLYENSGRIYAMQQPFLKLKDIRILRQGCQIG EVVKNRLEPHQHFYVSNAYGAGMKQCYEMDDAQCLSFLQGQQLPIAGYKGYTQMLWKGYA LGFAKGDGMVLKNKYPKGLRIH >gi|312955012|gb|AENW01000046.1| GENE 78 80440 - 82881 2177 813 aa, chain - ## HITS:1 COG:MK1654 KEGG:ns NR:ns ## COG: MK1654 COG1136 # Protein_GI_number: 20095090 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Methanopyrus kandleri AV19 # 7 206 6 220 235 68 26.0 3e-11 MLKLNRITLENTEKTHRMEDVSFHFPDTGFISIHGDDESLMLQLARLLAGLHKPCSGSMV YGEEVMEYFTPQEQCRYRSICTASLFCDFQLLEQRSVLDNIRMSYDEDEQELDNLLRQWG LYGKKETWIEDLDFDDHIRMVLLRILLRHPRVLVVYPPSSPFSTREWGRMFPLLKKLSAG LLVMVVQDENSYPWSDRIIEFEAGYVISDSCGQGSAYPQQPVSKTQFQLQPRIVKRMQTR LHHRFRLKYLLLMLLILTSLILVSTAVFSTTLDVTEIEMLYLKQNDLTSIAIEKHATGSS GEIYEKKYVPMQDADVQTLKKELKGDVFAGYVPVDSNIAIKSSYLTSADSYTIIEMDTVE RAGLKKIYGHYPGNIYETAITYQTALNLFSSQYGVQPPEFYLYQAVSWYGFPLTVTGIIA EDQPNSNLSLNMGGYAGSTTGSSSLNSGSLYVYPGFHKEHSNQQQQTFVPSSKRFIDKLT LRSYEVGNLYPIPYANAYYFYDGEQLHLDNDGKNQSMVKEDEVLLDFSMALRLGYRSRYL EGYRDDALPSWDMREADYTSFIKNWIGKTIEVQAYAIDTAPDDSTLMKKTVKIKGFLFPI TWDYMEDYLKNEGSILMNKEAVADCMQPNTMIQSVYFHSEKETDMRKALQYLRQHPTYSA FFSRSRLLQFFVVDLKKMSFLLFISGGAAMLLSIALLVHLLQSIMEDGRKEMSIYYMFGE NMYTLKGCYVQHILALVRRHTVAGCLMATLVVSVFVLMIYMKLSAAVTILLSLFLPLLVS AGYLLLLTLITHQLVKRTCIVEELFCDEKNGNI >gi|312955012|gb|AENW01000046.1| GENE 79 83116 - 83658 636 180 aa, chain - ## HITS:1 COG:CAC3598 KEGG:ns NR:ns ## COG: CAC3598 COG1592 # Protein_GI_number: 15896832 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 180 1 181 181 214 63.0 5e-56 MAKFVCSVCGYVHEGDAAPDFCPICKAPAEKFTKQEGEMSWAAEHVVGVAQGAPEDIMND LRMNFEGECSEVGMYLAMARVAHREGYPEIGMYYEKAAYEEAEHAAKFAELLGEVITDST KKNLEMRVDAENGATAGKFDLAKRAKALNLDAIHDTVHEMARDEARHGKAFKGLLDRYFK >gi|312955012|gb|AENW01000046.1| GENE 80 83748 - 84509 745 253 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401632|ref|ZP_06645774.1| ## NR: gi|293401632|ref|ZP_06645774.1| integral membrane protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 243 4 246 256 265 65.0 2e-69 MKDFFTFYTDIRNMAVPFTAFSLYHMLFLALAILLITTLFSYYRRLDAGKQRRMQVIMAI YFLVEELLYTTWLFLFCHEQVWHQILPLELCSLCVYMNALTVYLKKDTLRFFSGVVGLCA GLIAMVYPANISELYPVLSYRTINFYILHASFVLFALIQLQDRTLLQYHYMKKNFLIICG MFTTAFIINLNLHTQYMFVGIPPKISFIASLYHITGIMMFLPTILLALFLIQCAVVFLLR RVYRVKQDMQGSV >gi|312955012|gb|AENW01000046.1| GENE 81 84615 - 84893 189 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915655|ref|ZP_02077863.1| ## NR: gi|160915655|ref|ZP_02077863.1| hypothetical protein EUBDOL_01662 [Eubacterium dolichum DSM 3991] # 1 92 1 92 92 89 51.0 7e-17 MKIEAAALSEIQFKECAYPKTLKDSLKRIGLNFPIHVRKLRDGYQCVDGAKRLSAIQQIL KEDPAFRKFQSIRILVVETARTAPPYHLHNHH >gi|312955012|gb|AENW01000046.1| GENE 82 85050 - 85598 809 182 aa, chain - ## HITS:1 COG:no KEGG:EF1190 NR:ns ## KEGG: EF1190 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 178 1 179 189 169 49.0 4e-41 MSNLRRDLILWSDTLQDFHLPRWEELPNFDLYLDQVITLIEGYLQNLFDEENDTILTAAM INNYVKLKLIPKAEKKRYNRMHIAYLIAITILKQVLTISEVKQGIEYQAGINGLKEAFNL FCEEQEAAIKAVADHLKNQDSTFLLEGITVQNTAIKMATMSFAGKLVAEKILHLQNSYTA RL >gi|312955012|gb|AENW01000046.1| GENE 83 85710 - 86990 1125 426 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRHMILLPVLLAVLLIASAALYLHKPTFTFTLEKASGDMQQVEGLEYTMTVADASMRWE LSGKGKDISYTTSFLKEQEELAMEYDSLNEGFYLYIPTLLDGKQLTDYELEISRTITDDR YEEPVKADFYNIKQVAVDLLVKTDKGYACFPSGLQQRFQTPRSNIVYHQKDQQLYFQSNP EKAGLQKGGGLRHPYVTVQGKTLVPLYVAGNGSSGQYRIYEVEKALQSESMPNVQEAKKA SKVKQFISFDAKVNGISDVISYHDQLYAAVLRDNQGWLEVYDASGKLVKEEKLPKNTVFH RFDIQDGRLLILTSQRDKSYLKVYEQDKLVMDITSPISLSDSKFKLRDGRLFALNLRQPE NKAQHFLEISVFDQSKMVFDGYVKGDFEEDEKASAFYKKLRDKTNQTIPAMPYVNVRDVY AYGFKD >gi|312955012|gb|AENW01000046.1| GENE 84 86992 - 87738 825 248 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKEFENLNLLLFYRWKRSYKFYGIVFALYLAFCLFALLMKGEQLGWVRYEVYFGSRPCL LLFLAALSVVIVYQVATLLYMQLRSNALHRYLILPQSRVPFMLSELLMNISAIVILLLLQ YAVYYIGYRYYMTLAPFYNLKNGFYLSIVRSGMLKYLFPLTITQLLIIVSSIVTVSAMTV YLGVYYQRLQSYILCIANIAGVLFVWGMPSGIQFDVQRGMQLALMLVLAGLMVLSFRNSM NRNQYGGR >gi|312955012|gb|AENW01000046.1| GENE 85 87748 - 89046 1016 432 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401647|ref|ZP_06645789.1| ## NR: gi|293401647|ref|ZP_06645789.1| hypothetical protein HMPREF0863_01929 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 414 1 406 424 74 23.0 1e-11 MKKYICYILPVFLLLPILGALGVWSQKNNMQIGLRKTADGEFDVTGDTSAIKNLSYQFMV TDYLNVWQVTGKGDKLQAAYVKSDVLTDRTNTVDIQISPVFDEHIKQNSIENPGFDQPDD MEITHMISGVEAVSYRLSLLDPQAYGKNKQEDIAFEVRWKQDKLSSLIRCDYFDNDPKGS LSCSLTGDDLYQNARASAGLSDMSVDAHGYFIVSPLQFMYDFSQVTFDQNPGGIYRLENG KSRRIVSLPLGKQDILGMVSTEKNVIALVMEKNELSLYTYDSNGKQLDRSALSVALADIM EPVLLLDQNNHILFGYGNGFEYVFQVYEQKNASLKQIDRVNISVNAGSSGPLQLQYDQGV LYCMQEGNQTIRIMAANHKGMLYSSEVYGDYQEDDLLGYLDLNEGLSYEKIIQRYLFDDR RSIVNLKLLSKR >gi|312955012|gb|AENW01000046.1| GENE 86 89046 - 90479 1328 477 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKYMGYLPIGLLCLIVLFSQLLYTRRNDFHVELSTIAHEGERIGDPDAIKDLAYSFYIA DTNLGGYSGEGSNAWRIDAQGESFKISYDPKGYKQHQMMVGDDAEVFFSVSVSPKYDEKT MPMSEENKQSDADFYNDASIHSYENKIERLSYELVIGRHHVEGGALISDGEDNIQLFTVK TKNGKRDLTVTYHEESAGNQERVYVYPQASVGNADDKYGNLKNYGFLNAPIVKLGKESFT AIGALQFEVNFNEVEFEKDPTGIYRIEESGKLTPLVPMDVNRETVLYMEAFQGKLIAVVE KNGYLYGRAYSSKGVLLDEFQFSFDLQNTNRMMLLPEKEHVLFVQEPVYDGNNRDLLIYG MEQEQFKQIDHMPLNGLNITDISGNYANTLLHYKKDTGILHIVVNDDGKALYVAAQTNKK LLYRSTLLGDYTDDSKLALPDATQITTGNAYENIMSYVLNTQKRTLQNLRLVQDGDV >gi|312955012|gb|AENW01000046.1| GENE 87 90479 - 91906 1257 475 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVKKYMGYLPLCMLSIIIVFSLLVYSKRNDFAIGLSTVAAQEHKSVGDPNAIRDLKYSF YIMDDYPSSRNIHALENIWRVDAVGDTFTTTYDPAGYMAHMKKNAEKQMLYMSIQARYDA ETMNPGAMTKECSTYDNGIPFCTYSGKVDHLTYDIIIDNSDYGYGNTVNFPKTKKSAVLR SKSGKKEIEVNYTLQEGQSEDDIYIYSTYGGGNADDIYGNLKGSALQTIYDVKIEDDFFV SVSALDFDVNLGNLKFDNDPTGIYKVDSQGKVTQIVQKDIKKGTLISMCAMDNHLAVVEE EDGKLYGRLYSTEGRLLDEIRLEMDLDQIGKVMVSEDQGTLLFQLQSIYDIMKYTVVMYD VKDDAFQKLDRMGMETQTNTSMYGSYGLYISLHYDRSKQILYSIQMNDDNGLYVSAQTNK KVLYNSFLYGDYNDDTYLALSDAASSNSYENIVFSFLNTQRRRLSDLISPLDGDV >gi|312955012|gb|AENW01000046.1| GENE 88 91914 - 92729 838 271 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSFRTHREHISKLMYYQLHRTGKIYALFAVALIALPLITIMLKDISYFQRGYYNEFLLN PTCALTFPLLVFLWLLYSVFDLKRLHWKYNVQDRELILPVSRLDLIISNVLFTLLSLYAL YVLQSIVYYAGYQLYEMKSPQQLLHNGFFLSMTRTQYYTGMFLPLSISGYLTQLLYSVLM SLFVVCIGRFGFRKNKIALFMIVLYVLFPIVIYFLGMNMSLAIGEKPTGFTLQLLKFYEV FVYKGWYRLYLCILGAVMMAGLYRKTRKSAW >gi|312955012|gb|AENW01000046.1| GENE 89 92707 - 93456 1050 249 aa, chain - ## HITS:1 COG:BH2648 KEGG:ns NR:ns ## COG: BH2648 COG1131 # Protein_GI_number: 15615211 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 224 1 226 229 132 31.0 6e-31 MLHMEHLTKDYGNGQGIFDICLDCEKGQIIGLVGSNGSGKTTLIKTILQLLPYQEGTIRW KEQAIKDIFEDIAYITDTLSFLPDMSPKAYGAFLKDFYPRFNGNRYDRILQHFEIDSRKK LKKMSAGQKLKVEIAAGFSQGAHLLLLDEPFSNLDVFSKQDSVKMLLSLLNDEETVLISS HDIDDIDQVIDRAVVLRRGRIVQDVVMEELHERGISLKECLNDIEKYDPNRVNLLFEEGS ESHVELPDA >gi|312955012|gb|AENW01000046.1| GENE 90 93514 - 93888 384 124 aa, chain - ## HITS:1 COG:BH2647 KEGG:ns NR:ns ## COG: BH2647 COG1725 # Protein_GI_number: 15615210 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 7 123 3 119 123 92 37.0 2e-19 MNVFSDLKLNSKTSVYLQIIQHVKRKILNKSIIAYTPLPSRRELASLLSINPNTVQKSYK LMEEEGILRTISNVKSVVYVDEQIMERLQQEMIQETVDDFIANCRECGLPFQKVVAILST RWDI >gi|312955012|gb|AENW01000046.1| GENE 91 94022 - 94687 693 221 aa, chain - ## HITS:1 COG:TVN0717 KEGG:ns NR:ns ## COG: TVN0717 COG0120 # Protein_GI_number: 13541548 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Thermoplasma volcanium # 1 205 1 208 241 147 42.0 1e-35 MSEMEELKRRSAQRAAAYVQDHMVLGLGTGSTVRWLIEELGRHTDRQHLQVVSSSLASKL LAQQAGLCVVEPDVIDHIDLVIDGVDQINSRKQAIKGGGGALVREKILAEAAEQVIWIMD AGKRVETIEDYTLPIELVPFSHPFVRRTLTKRGYGVTLRMQQDSAFITDNGNLILDVRIP ASRTIQEAHDELVHIAGVVETGYFHIEAMCITAETTGVTIW >gi|312955012|gb|AENW01000046.1| GENE 92 94680 - 96083 1597 467 aa, chain - ## HITS:1 COG:BS_yqjJ KEGG:ns NR:ns ## COG: BS_yqjJ COG0364 # Protein_GI_number: 16079442 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Bacillus subtilis # 8 462 13 486 489 354 38.0 2e-97 MKQLTFTIFGGTGDLTFRKLLPALYNLQAQSKLEEDFSIVIIGRRDYDHAGYCEEAAGWI KQYARLPYRMDEFERFARRIHYVQMDFTGLENYERLNAFYKEQHLHNHVFYFAVAPRFFA VIAKGLEQVEKACTGKVIIEKPFGEDLESARVLNEDLERFFTKERMFHIDHYLGKEMVRN MQAIRFMNPIFQDVWNAKYIEHVQISAMETVGVENRGGYYDQSGALKDMVQNHLFQILSI TAMEQPSSFFGEDMHQKQLDVLHALRPVEQLDMKDSVVLGQYFHYQKEDRVADDSMTETY AALRLFVDNERWRDVPFYIRTGKKLKEREMEVVITFKKTNPDVAANVLLIRIQPTEGVYF QFNIKKPGDSDEIEATSMDFCQSCSDANRINTPEAYERLLAAAVQGDASWFSQWDQIESS WNYVEQLRQRYRRERLPLATYMAGSAGPKEADELLQRHHHTWSHADV >gi|312955012|gb|AENW01000046.1| GENE 93 96080 - 97492 1766 470 aa, chain - ## HITS:1 COG:ECs2830 KEGG:ns NR:ns ## COG: ECs2830 COG0362 # Protein_GI_number: 15832084 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 466 1 466 468 476 52.0 1e-134 MRTNNIGMVGLAVMGRSLALNMADHGYKVGGYNRSYAVTEHMLEAWPHENFTGYSTLEEL VASLEKPRKVMLMVKAGKAVDAIIEQLIPLLEQGDIILDGGNSFFEDTIRREAYLKGKGL HYFGVGISGGEDGARFGPSIMPGGNKAAYEEIRPILEAVAARAEDGTPCCTYIGENGAGH YVKMVHNGIEYADMQLIAEAYLLLKHVGHFDNAQLAEIFSEYQKGELNSFLIHITSDIFR EQDDKSGKELVDCIRDAAQQKGTGRWTSIEALKQGVDVSMIAAAGNTRVMSNNENRKAAE KQYPHVEIAEISNPDAFKEEVRQGLYAAKIIAYAQGFDLLKQASASYGWELPLGKIASIF RAGCIIQAKFLNDITRAYEQQADLSHLLLDSFFQERVVSYEKNLRQIGAQAILSGIPVPA MANAISYLDLFCATHVGANLIQAQRDYFGAHTFERVDEEGSFHHEWRRWA >gi|312955012|gb|AENW01000046.1| GENE 94 97505 - 98437 1105 310 aa, chain - ## HITS:1 COG:BS_ykgB KEGG:ns NR:ns ## COG: BS_ykgB COG2706 # Protein_GI_number: 16078366 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Bacillus subtilis # 1 308 1 345 349 95 25.0 1e-19 MNEIKGFVGTYAPAKGIYSFLYDVQKDAFVKTDLFYPVKDAKYLSYYKNRLAFPTQLADA RLCVLANGRELLAGLENSTACYVVQDEDCVYTVNYHDGTLIRYRFSEEGLHEESIVHIQH EAGAHQAILTGATILVPCRLLDRVYVYERTSMELIRAISFPKGTGIRHGVLDDHGRFLYM ISEDSCEVFEMNMEQGGVITRKLSLLKEGEQGGGAAIRISSSGETLYVSVRGINQLYVID IAQWRILQRISSGGDHPRDINLSPQGDYLFAANRSSGNLVAFKIDHISGMLEEKAHTDTI PEGVSIVFYE >gi|312955012|gb|AENW01000046.1| GENE 95 98675 - 99295 799 206 aa, chain - ## HITS:1 COG:L166479 KEGG:ns NR:ns ## COG: L166479 COG4684 # Protein_GI_number: 15672553 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 198 1 189 196 86 37.0 2e-17 MKSKKTQYMSIMAMFLAIQIILVVTPLGYLPIGPISATTMHIPVIIAGIALGKKAGAQLG FVFGLTSVLNATFRPTLTSFCFSPFVTIGGIGGNWMSLLIAFVPRILLGYLAGLIYEKLC RKGINENVGIIAGALTGAITNTVLVLGGIYLFFGSAYADAIKVAYDTLIAVLLGVVATNG IAEAILGAVATLLVCKAIRPITRKFN >gi|312955012|gb|AENW01000046.1| GENE 96 99544 - 100011 285 155 aa, chain + ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 8 150 4 147 152 103 39.0 1e-22 MERKAFTVLSLREQPQLLKVAAQWFHSKWQIPCQAYEDSMQECITGTAFIPQWYVILDSS GTIIAGAGLIANDFHERKELTPNVCALYVENAWRGNGYARTLLDHIRREAGSEGLSRLYL ITDHTVFYEVCGWEYLSLIREDSGDSIRMYTAKTL >gi|312955012|gb|AENW01000046.1| GENE 97 100321 - 100536 126 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKRCINVKYAIRISLMCVCFSCVTANASTLSAKRHTPDVAVLACRRALFMLGAVSCVIL VSEQLRKYRGK >gi|312955012|gb|AENW01000046.1| GENE 98 100843 - 101592 596 249 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQITFYHWGYQCPIIAEMLELFQEAAMDDVTCIDITGQEKLAFEKQLYYPFLTIFNQQLH WYGPVTAAVLKGVRDGAITREKPYVIEQSYEEKRGELLPLTSETLALTAKGCTLCADCAQ MKKKSDFLSSCGLTTFGFIHQLEGQIVGGVEWMPSLQVPYPIPKDAHTAFLTCVYHSSEE ADYKAWPLQCMEKELFKIYRRILVICDEESTFPNGTKDWFERQGYCDLGLIQVLDGYARL HLLEKKRSE >gi|312955012|gb|AENW01000046.1| GENE 99 101583 - 102551 988 322 aa, chain - ## HITS:1 COG:BMEII0898 KEGG:ns NR:ns ## COG: BMEII0898 COG3191 # Protein_GI_number: 17989243 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Brucella melitensis # 6 318 9 327 335 261 50.0 2e-69 MKEIKITDIKGFQVGQAENQKAGTGCTVILCRDGAVAGVDVRGGGPATRETDLLHPINMV QKIHAVMLSGGSAYGLDAASGAMQYLEEHGAGFDMQVAKVPIVCGASLFDLSVGDAHVRP DKEMGYAACVDAENDTVLEGNHGAGTGASVGKLLGFEHAMKSGIGTCGIQVGDLQVAAIV AVNACGNVVDYETNELLAGVYDSHSGSVLKAQDVLFQQMDALRKLPEGNTTIGCFVTNAK LDKAQCTKIAGIAHNGYARAIHPVHTMSDGDSIFVLSSGEVEVMADAVGMLATEMMAKAI KRAVLHAESAYGLPAHSDVICK >gi|312955012|gb|AENW01000046.1| GENE 100 102950 - 103924 932 324 aa, chain + ## HITS:1 COG:no KEGG:LA_1827 NR:ns ## KEGG: LA_1827 # Name: not_defined # Def: hypothetical protein # Organism: L.interrogans # Pathway: not_defined # 4 267 2 266 289 73 25.0 1e-11 MSDATNQLNYSNDLFFKYTLSREDEGSVYARNTIIERVTGIRVKESTVLNPNLDPGIIGK KRIILDVHVKDEQNRHFNIEMQTTYKGLAEMMRFEFYGARALNNQLNSGKKYRDLKPVYQ IIFIDEYAWNNRNLINQYQMRNEQGENESYYPLILRTYIHMPAINDIVKEKEMQRLNDFE QLIYLFENNEKNDILKSKERLVKVFMDKYEEMQKDDELWSTAMAIQMGEARYRYGLEDSY EEGMKEGIIKGKEEGKIEGEKVGIHKGRIEGKISLLLQQLDSKYHEDCSVWLFSLNDEQI ENVSSLILTCNTLQELKDQVMISQ >gi|312955012|gb|AENW01000046.1| GENE 101 104348 - 104797 129 149 aa, chain + ## HITS:1 COG:no KEGG:Blon_0991 NR:ns ## KEGG: Blon_0991 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 4 145 2 145 145 158 55.0 6e-38 MKECEECYSINNRSTPILNPRDCLENHLQYICGTCGRCICVNRTEKSGLQRWNFPFKTLE TAKLYLRSADICAETNCGIYEIKNERGRYSYKIFNSPSIAAAYTNNHKVCLNEKPLYQRE RFKRYPNAEIRRLTSHEVDIYLKEQNETK >gi|312955012|gb|AENW01000046.1| GENE 102 104831 - 107041 1340 736 aa, chain - ## HITS:1 COG:CAC2107 KEGG:ns NR:ns ## COG: CAC2107 COG5492 # Protein_GI_number: 15895377 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 303 493 174 368 439 71 33.0 5e-12 MKKLLTLFATIALTAVCVTPTPLYAADVQTEKTNETVSNAVAEINGTSYASLSEAIQSVQ EGQSIKLLQDINLTASIDVKDKTFSLDLNGLNIKQELNDSVGKTNAPIRLYNSSMTVNDS VGTGSIFGYQCAVGVFVNSSLILNNGSLKGEWYGIAGNGLNNNGTTIVINGGSISNADPD GTGAAIYHPQTGEITINGGTVKGDLGIQLCSGNLSVMNINGGTVSGTGADKRNSKTGDGA IPDGAAISVVNRPGYSSIPNVTISGGTFTSSSSEALLAYTWSKNENKEWVVSDWANAKEN VRVNGGIFNTDPTAYVSNSYKAFKTSDGFAVAPLASNITLSENELTLEEGASKTVTAVLA PEGTLETVTWSSDKPEIATVKDGKVTALKSGKAVITAETESGKKASCTVTVTKPVAVETP SIDTSKPTDEIKVGVNDEKAEQLLKDVTDQIIAGSSEFTDADTANAVIKAAKAGKTVTVV ADVQKADSSNAQVQADAKKIQKELEALTAESNNTATVAMYLDLSVLIKADDTVLGNITNL STPMKFTVVVPENLLAEGREFYILRVHNGAVNKIVPEHNKNILTFGTDRFSTYAVVYEDK KIDDNGTTPEPKPEPTPEKTIYNVVFVDMNGAVLRTEKVEANKAATAPKAPEVEGYRFVK WDTDFTKVTKDLLVKPVYEKVAATEKPSTPEKPSSDKKSPNTGDTTNAGLFTAFALLGFV SMGIVAIQRKRKQLMK >gi|312955012|gb|AENW01000046.1| GENE 103 107496 - 108566 894 356 aa, chain - ## HITS:1 COG:no KEGG:Acid345_0658 NR:ns ## KEGG: Acid345_0658 # Name: not_defined # Def: amidohydrolase 2 # Organism: A.bacterium # Pathway: not_defined # 4 350 36 376 380 253 37.0 1e-65 MNDLYLSQFDPYAECITPQHPICKPKFPVFDMHTHMGNLVPGPGYAALYNTAVYVEALQD AGVAHIVNLDGVWGNELDAMIRKTEGFENYITTFVWIDVSRIDDPDFKQWVRNHLMEAYR KGARGIKMWKVISLEYRDTYGRYIRTDDSRLDVVYQTAAELHMPILIHIADPVAFFKPAD RHNERFEELNCHPDWQFGKPGQLCFEELMDMQDRMVENHPQTTFIIAHFGSYAENLKHVA LRLDRYDNMYVDMAARVAELGRVPYSSKTFFETYSERIVFGTDCCPLDLGQHSIYYRFLE SMDEYFPYQPNGELPGQGRWRIYGIGLSDEILRKVYYQNACRIMNMDEQQFLLQNK >gi|312955012|gb|AENW01000046.1| GENE 104 108563 - 109657 1232 364 aa, chain - ## HITS:1 COG:lin0304 KEGG:ns NR:ns ## COG: lin0304 COG3839 # Protein_GI_number: 16799381 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Listeria innocua # 1 360 1 362 366 459 64.0 1e-129 MANLRLENINKIYDNKVQAVFDFNLEIKDKEFIVFVGPSGCGKSTTLRMIAGLEEISSGS LYIDDVLENDVPSKDRDIAMVFQSYALYPHMSVYDNMAFGMKIKKVPKDEIDKRIHEAAR ILEIEPYLKRKPKALSGGQRQRVALGRAIVRNAKVFLMDEPLSNLDAKLRVQMRSEIIKL HERIGATTIYVTHDQTEAMTMASRIVVMKDGYIQQIGAPKEIYEHPANMFVAGFLGSPAM NFIEGTYKEGMFCFDAHSIEVNNLAKESLKTYENKRIIMGIRPENIYMEEIVAQTYPKSV IDYQLDVKELLGNEYILHGTIGNTPMVAKVNARMELQPHQMLKLTIDANRMNFFDPETEE AIHS >gi|312955012|gb|AENW01000046.1| GENE 105 109670 - 110506 662 278 aa, chain - ## HITS:1 COG:SPy0255 KEGG:ns NR:ns ## COG: SPy0255 COG0395 # Protein_GI_number: 15674435 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 6 278 1 275 276 194 36.0 1e-49 MKKHKMTKQKAVRYSIFIGLAILAIFFIMPYFWMLSNSFKSTQEILVNPRHLLPLEPTLS GYEKVLTQSPFFTWFKNSAFITVTNTVIILFTSALVGYVFSKFQFKRKKLLFAILLASMM VPAQTTMIPSFLLINSLGLYNSAGALILPSFVNAFGIYLCKQFCDEIPRELIESAKLDGA GDFTIFWKIIIPQIRPALGALAIFTFLNYWNDYLNPLIMLNEVKKMTLPLALSFFASQHM ADLSATMAASALIMVPVTVVFMIFQKHFIKGIAMTGMK >gi|312955012|gb|AENW01000046.1| GENE 106 110508 - 111383 624 291 aa, chain - ## HITS:1 COG:lin0760 KEGG:ns NR:ns ## COG: lin0760 COG1175 # Protein_GI_number: 16799834 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 8 286 19 291 296 185 41.0 8e-47 MKNKKFVLIVLIPIFLHLMIFMIGPIIGGLAISFFDYNPLRSDNHFVGLDNFVRLVQDPV FWKATKNTLFFVVITVALNIVISLGIAQLISMFKSNKTRSLFRMIFFLPCVAPLVASSVV WAKSILPTTNGLANMALRTLGLAEVNWLGNPDVLMWSIIVFSIWADIGYNIILFTAGIDG IPGEFYEAADLDGASGWQKFRHITLPLLKRTFTFVTIMTLISHFQAFAQFAVMAVRNGPQ NSGLVLTSYIYKTAFETKDMGYASAISLALFMIIMVVSLIQQRANKVEWEY >gi|312955012|gb|AENW01000046.1| GENE 107 111440 - 112720 1063 426 aa, chain - ## HITS:1 COG:BH3690 KEGG:ns NR:ns ## COG: BH3690 COG1653 # Protein_GI_number: 15616252 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 362 1 358 420 99 29.0 9e-21 MKKLVCCGLSALLSATMFGCSSSSGGSDGDKVELTFWGHQNEPWAASYQKIAREFEEKNP DIHINIEFFPYDQFESKVQTSLISKEGGADIYELWGGWGLDFASTGALAEIPENLSKTIH DDVYPSTIGALEYEGKLYGLPMEFNIENGAMLVNKKLMSEHNLKTPTTWKELRETAKKAT KKDGDTITIKGFDFVNWDSVPYMFLSMILSTGGTYQNEDGSFNLQTPQAKAALQELYDMV KVDGVTTMEGLDGGGDMEGYQQLYAGNVVMVPRGPWTIAEGITSFGLEYGKDFDYVSMPW FGDKPAFAAETGWSMAVNGNSKQQEAAFKFLEYFFQDDVLMKHNIACSQIPPKKSVASNP EFIKQMPYAEPLVKILDKSQFIGHFNTDQFKEKVNATFQKLVRGDIKNVDQALITMEKEL NGIIKK >gi|312955012|gb|AENW01000046.1| GENE 108 112766 - 114100 1549 444 aa, chain - ## HITS:1 COG:ECs5101 KEGG:ns NR:ns ## COG: ECs5101 COG1486 # Protein_GI_number: 15834355 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 4 434 6 445 451 283 37.0 4e-76 MKRKFAFIGAGSLDFTRGLVRDILTFDAFRDCEIMLMDINETRLKYAKDGVMRIVEAGKY PAVVHATTDRKEALKDADGVLITILQGGVEVWRHDIEIPKKYGVDICVGDTRGPSGIFRF LRTAPVLLDIIRDVEVLCPNAIVLNYTNPMAMLVSYLQTQTEVNVTGLCHSVQGTAEMLA NWIGADPKEISYTCAGINHQAFYLNYEWKGKDAYPLIQNAIQREEVANEEMVRIEMYRHL GYFPTESSGHNSEYNPWFRKRKDLIETYCTHGTGWNPGAYAYILDEYLEREDTWEQEYRD WVNQGDIDLKRGDEYASNIFNAIFGDHTPYFFNGNLRNKGYIRNVMENACVEVPVVATSK GIHSIQQITLPDHLALMVDHSARIEELAVQGALNGDPQLIFEAILFDPLTASVLSMQEIH DMVQEMLHKNKDYLTYFKTLDLKD >gi|312955012|gb|AENW01000046.1| GENE 109 114277 - 115287 809 336 aa, chain + ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 1 330 1 330 335 159 29.0 7e-39 MSTLRDVAKLAGVSLATASRILSNDESFKATEATRKKIEDAVRELNYTFKSKAKTSKYNI GCIMAVTSEKYGDPFFNSILASAEEESTKYGMAISSIKNYNELKDPAILSEMCRQNLDGL LLMEDLPKDTFAALTASIPYIVGIDPYCCDYNNVGFDHIEATFQVMDHFLACGCRRIAYI GGGAPNTCFLDSKRMIAYRESLRKAGIPYDPSIVIDCDWDIEKCVQETEQLMLQENRPDA IFAGSDTLASVILGKLYEMDIRCPRDISIIGFNNLSTTAHMIPPLSTVDVPTHEIGKRSV QRLYQLIHEHDETILNILLPTKFIERNSTARKDMKE >gi|312955012|gb|AENW01000046.1| GENE 110 115284 - 116252 644 322 aa, chain + ## HITS:1 COG:CAC0183 KEGG:ns NR:ns ## COG: CAC0183 COG2971 # Protein_GI_number: 15893476 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Clostridium acetobutylicum # 1 303 1 301 306 119 28.0 6e-27 MNYYLGVDGGGTKTKFIICDAFGRVQAQSIQPTCHYLQCGLDGVTKVMQDGLYDCLNSSA IKVEQIAAAFIACAGYRDIEKDSPAIERAVKKAYPQIPHMLGNDMENALAGSLAGAAGIN VIAGTGSIGLGKNEQGQMCRSAGWHHIFGGDEGSAYWIACRLIQHFTKQSDGREPKTALY EAVKTQYHLQEDSDILTTCVVNWNFDRTRVAAMSQTVFTLAKQNDPVAMKIFQEAAKELA DIYLAIYRQLPFTSKNIPVSYSGGVFKSGSYILEPLKEYLSIEPTLTLTAPILSPDAGSI ILAMQYDNRLIDEKIIQNLRTL >gi|312955012|gb|AENW01000046.1| GENE 111 116551 - 117675 1076 374 aa, chain - ## HITS:1 COG:BH0421 KEGG:ns NR:ns ## COG: BH0421 COG1820 # Protein_GI_number: 15612984 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Bacillus halodurans # 25 364 27 376 397 226 39.0 6e-59 MKTMIINARVLMHAQRCVKEEAVLIEDGTILDIASECELPHAEQVIDAEGLYLAPGLLDT HTHGIGGFDFNTCTAQAIEEIIALEHAEGVTGFLASLVVENHAMTMERLQLLDSQVTDSL LGIHLEGPFLNPKQKAVMKEEFLRLPDIEEFRQFLRVSSHVSSMTIAPELPDAQRLIKEG TRQGIVMNIGHSMADAQQVMQAQRNGAKGITHLYNAMSQHEHRNPGVVTGALLSDLMCEL IVDGFHVHPDVVHATYRALGDDRIILISDANPYKAVADGEYPFSGKNIVIQDGKATVKET GRIAGSTLAMNTALRNMCRYTGCSVESAVRMAAYNPARLYGWKKGSIEPGYDADLMLMDD AFHIHRVWQRKYFM >gi|312955012|gb|AENW01000046.1| GENE 112 117737 - 119821 2836 694 aa, chain - ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 692 3 690 690 571 43.0 1e-162 MRDYLSHEVRNVVVLGHSGVGKTAVMESMLYFTKASDRFGVTSEGSSLIDYDPEEIRRGI SVYASLVPIEWKDCKINFIDTPGYADFIRGAEAGIAVGDSALIVVDAKDAVQPGTIKAWE AAQKRSIPTIFFVNKLDEDNASFDQAYSVLRETFGKSVIPFEVPIMENGKTIGSVNILRD KAWYFEGSLADPNKAQPVPEDMTDIVAEYKNQIAEAIAMSDDELMEKYFSGEEFSEAELT RGVRLGVRNGEIRPVFSGSATHSVGTERLMDLIVKYFPTYGEAGSIMVSDAETKEPVMLE TNEKETLCAQVFKTVVDPFVGRISYIKVLAGVMSSDSVVYNATKDQVEKISTIFIVKGKH QTAVGKLFTGDIGAVVKLQATQTNDTLCEKGKHYLVEPIQFSEPMLGMAVFPNSKNDEDK MSSALARMVEEDPTLRLENNKETKQTILYGIGDQHIDVVLNKLKNKYKVEVRLETPKVPY HETIRKTAVGEGRHKKQSGGHGQFGHVFVEFAPNPDEEEMVFEEKVFGGAVPRQYFPAVE TGLRECMQHGLLAGYKVVNIKATLLDGKYHDVDSSEMAFKLAARLSYKAGIPEAKPILLE PIVNITVKVPDEFTGTIIGDFNKRRGAIMGMDMVDGYQEITAQVPLAEVQKYPIELRAMT QGRGVYTQSFDRYEPVPSNIADGIIAQHKKEEEE >gi|312955012|gb|AENW01000046.1| GENE 113 119834 - 120505 960 223 aa, chain - ## HITS:1 COG:all2748 KEGG:ns NR:ns ## COG: all2748 COG0666 # Protein_GI_number: 17230240 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Nostoc sp. PCC 7120 # 25 203 91 269 426 119 40.0 6e-27 MDQKFNKAFWDACANGDFATVCAEIKKGADINYQNGDGRTGLMRAAKRDYKDIVRVLLDN GAEVNLEDNKGKTAIMGAAKKGNKTICKKLIEAGADVNTSDDRGRTALMRAAFLGHDRCV EVLLDAGAEINAQDEVGRSALMEACVAFKKDVIRMLIERNADVNLCDNNGCTALMRAAYG GYVGLVEDLLANGADKDLIDKEGHKAIHYVREDCLAQLKPILK >gi|312955012|gb|AENW01000046.1| GENE 114 120909 - 121175 320 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402096|ref|ZP_06646235.1| ## NR: gi|293402096|ref|ZP_06646235.1| transcriptional regulator, MarR family [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 84 1 86 154 80 51.0 2e-14 MDISLYEQQVEELNRKLTFQRSRYLKEEYEHYRITDMQYSVLSYIQQHPCTTIGSVAKAL HTDAGNMSALCKKLEHSGYLIRKKKGTG >gi|312955012|gb|AENW01000046.1| GENE 115 121183 - 121365 197 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELCTSQSGALCVQTISRKIQQHYEEQWKQHNYKDKEIIVKGLEKLNQFLDAIMRKENMR >gi|312955012|gb|AENW01000046.1| GENE 116 121362 - 121997 829 211 aa, chain + ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 4 204 6 204 215 74 27.0 1e-13 MTKKGILFDMDGTLINTYENINFRQALSELKTVQKTLILKILKSRVRSFAEMETRILQEV EDPAEGKELVRRVSDFLLEHYDNAPLKKDALMFLQYVKQKNYKICLCTNNATEIVSHILR EKHMEAYFDYVITSQQVTRSKPDPQMYLEALHNIDLTAEECIVFEDTENGVMAARNAGID VIVVNDKEKRKYSDALMTIRDFGDYRLYQEF >gi|312955012|gb|AENW01000046.1| GENE 117 122007 - 122819 721 270 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 3 255 6 268 270 138 29.0 1e-32 MELILYFFLYSFFGWLCECIYCSIPAHTFINRGFLAGPYCPIYGCGALAVLHILDPFGFS IPLMFVMGIVVTSALEYVTSWGMEVLFHTKWWDYSSYPFNIHGRVCLKNSLLFGCMVLVV YYLIHPAIQEFVHLFSPGMQTMLCTAALFGFGYDLFNTALALLRKNKDFQEIEESIRELR QEFANASITLLQENLSDAVARVLDSTNADEILLERIERLRQRITSLHTKRKRTHIRLQKA FPTRIEAISRINAERLFSIINERRKKEDGK >gi|312955012|gb|AENW01000046.1| GENE 118 123210 - 124286 1020 358 aa, chain + ## HITS:1 COG:BS_ytvI KEGG:ns NR:ns ## COG: BS_ytvI COG0628 # Protein_GI_number: 16079968 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus subtilis # 36 353 35 359 371 122 27.0 1e-27 MNTEKQRAFIIHFVYSCLILALLYLFLRYVMYAIMPFLIGFLIAFMLRPLIKRLTALSGG HEKLWSSIVILVFYATIGAFVTLLFMKGFAFLKDFVEDIPRLYQQNLEPFLNDTLGNVES VWKEVDITGAQAIQSFLDGLQSSLYSIISSLSKHLVSLFTGFASSLPNLLIAFFFAIISS FFFNADYPRIIAFFIRQLPEKGAQIVFTSRHYFTDTIARFAVAYGKIMLLTFFELTIGLH ILGIENALVIAFLIAIFDVLPVLGTGGIMLPWILISFLNNQVKTGVGLLILYLVITVIRN IIEPKIVGKQIGLHPLLMLMCMYLGARLFGFLGIFILPILILIVQNLNDTGIIHIYNS >gi|312955012|gb|AENW01000046.1| GENE 119 124868 - 125011 90 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQLPLPISCMALPAYSDCACSYSTTAGFVFVYSFSNNAAGAPHNGHT >gi|312955012|gb|AENW01000046.1| GENE 120 124960 - 125583 660 207 aa, chain - ## HITS:1 COG:AF0830 KEGG:ns NR:ns ## COG: AF0830 COG1853 # Protein_GI_number: 11498436 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Archaeoglobus fulgidus # 1 167 1 167 169 151 46.0 6e-37 MDQTAFFKLSYGLYIISTTSEGKDAGCVANTLHQVTSSPAQLAVTLNKDNYTEQLIEKSG RFSAVVLTQNCGMDIIKNFGFCSSRDNDKFAQCTYRRDTHGVPYPSEHMAARYSLKVVKT LDLGTHVMFVGEVEEAEVLSEEEVMTYAYYHQVKNGATPKNAPSYQEKSEKSGWRCTICG YIYEGDPLPQDYVCPLCGAPAALFEKL >gi|312955012|gb|AENW01000046.1| GENE 121 125843 - 126334 507 163 aa, chain + ## HITS:1 COG:BS_sigV KEGG:ns NR:ns ## COG: BS_sigV COG1595 # Protein_GI_number: 16079766 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 14 163 15 165 166 99 39.0 3e-21 MKQRLHPDDLEFYLKSNEKRLYRLAYSYMHSDADAKDMLQNAILKAFTGLTRLKNMEYMD TWFYRILINTCLDQIRKQRRESVYPLEEDIMLQEHTDMLLSEELHQLLFALDPKTRTILI LRFFEDRKLDEISDILSMPLSTVKTRLYKGLKDMRIQMEEQDV >gi|312955012|gb|AENW01000046.1| GENE 122 126331 - 127203 931 290 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1046 NR:ns ## KEGG: Cphy_1046 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 8 278 8 296 298 119 29.0 2e-25 MKKVDKLRQEYEEIQTPQDLDSFMDTCIDQAQKKQSRFTFYRLWKPALSAALIGYLIVLN TVPAFAQSVFAIPLLGDVSRILCVREYQKTSDVDSLSVKVPEVKNTGNPEMEERVNKQIE ERINKTTEQLYKDSAQVREMMKKEKVESLTAKTEVTIDYKITCNQKNLLSFQIMTNYQLN TSMQEYQTFNLDLSSGRDITLQDLLGKDYEDIINTSVRRQIKERTEQNENASYFDGAMGF QGIRKNQPYYIDSKGNVVIIFEKYSIAPGYMGTQEFKIPCSELHKYTGGK >gi|312955012|gb|AENW01000046.1| GENE 123 127206 - 128573 1514 455 aa, chain + ## HITS:1 COG:BS_yjeA_2 KEGG:ns NR:ns ## COG: BS_yjeA_2 COG0726 # Protein_GI_number: 16078275 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 233 441 17 213 217 155 40.0 1e-37 MKQEYKRNRHVNPKRLMLLILIPVLLLAGGFGIYKIMAEDAYAAYNTYDESNKKEGTMEH FTEEKEDTYYLSFYYPKFEDKQLNEIVQTYRSTSIQTKRKHEGMQYIAIDYASEKLFDQY VNLTFIQKIYDADEKQVDEVRNHYTYDTKQRKLITVQDALRRDYVQVVKKLAETAGIKTP SITSLQVQVEKDGLMLYTGKETKGMAFPYKEYKKYIRLANRNIPSLYQKDAIIPTEQKVD PNKKMIAFTFDDGPHWQNTQIIMKEFEKYNGRATFFMLGQNVKDDTTGVDHTDIVRDMYK RGFEVGNHSWDHSMRIAASKSDAMSKAEVSDEIYNTQDAIFAACGADATMFRPPYGALNN NVRAVSTLDFALWDLDTLDWSNKNADIITQNIMQNVHDGSVILLHDIHDFSRDAILQVLP KLEAKGYQFVSLSTLRKYKNEELVNENIVIPASMK >gi|312955012|gb|AENW01000046.1| GENE 124 128894 - 130261 1340 455 aa, chain + ## HITS:1 COG:BS_yjeA_2 KEGG:ns NR:ns ## COG: BS_yjeA_2 COG0726 # Protein_GI_number: 16078275 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus subtilis # 237 435 20 212 217 146 39.0 8e-35 MNTRRKKIRKDRLAILLVLCAVVITTIGFGIWKISGMLFHDPYETYKAYETKGKDYGDIQ QVSKEYENEAFVSFTYPAYEEKELNSLVKAYEKKTVPAAGKTKKQITSIDYDSSLLFDRY VNLAFHRHTYNVDGVQTHTETTWMLYDKKQKKQLVLEDVLRREYPALVKRLAGEQGWKKD IKRDTSALSMTKTSLRIHLDEKHTVSIPYKEYRKYIRLKDSHIPSLYQKDTAVARAQPKV DPKKKMIAFTFDDGPSAYTSEVMDIFERYDGRATFFMLGQNVEANRDTVKEMYNRGFELG NHSWDHSMDLAASKKGYMSVSQVTENIYKVQDAIYAICGAEPQYFRPPYGAVNNNMLKGN HLGYAFWDIDTRDWSSKNAASITAAALNGAKNGNIVILFHDIYEPSVESLKSILPELKKQ GYQFVTYSTLMKYEKDYLLKLDAGYGVSEAYANGH >gi|312955012|gb|AENW01000046.1| GENE 125 130336 - 130836 360 166 aa, chain + ## HITS:1 COG:MA0330 KEGG:ns NR:ns ## COG: MA0330 COG0778 # Protein_GI_number: 20089228 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanosarcina acetivorans str.C2A # 2 162 9 169 179 149 45.0 3e-36 MLTEIWTRQSIRRYEDRTVEKEKLEELLRAAMHAPTARNTQSWRFMVIRNRKALDEMTTL QPYTGMMKTAPCAILVMGDQKATDLDEYLYCDCSAAIQNILIEARHQGLSTCWCAVGPRK ERINNFRNYYKLKEDLLPVAVIAVGYGCEDKEIADRFDPDKISYFD >gi|312955012|gb|AENW01000046.1| GENE 126 130978 - 131457 416 159 aa, chain - ## HITS:1 COG:no KEGG:Sterm_2228 NR:ns ## KEGG: Sterm_2228 # Name: not_defined # Def: glyoxalase/bleomycin resistance protein/dioxygenase # Organism: S.termitidis # Pathway: not_defined # 5 136 4 135 140 124 46.0 1e-27 MTPLLDHLHVTVRDLKRAERFYDQFLPLLGFDLRYKEYDRKEANAYEIIEYHHAAFSIGI VSPRSCFEKEKLSRRKPGALHHVAFMVDDTQTVDRLYEQVLQMKMQIVHAPRFYPEYCED YYAFFLKDSEGIELEITCYDRQKYFPYISGDTENSRHGS >gi|312955012|gb|AENW01000046.1| GENE 127 131459 - 132376 967 305 aa, chain - ## HITS:1 COG:PH0232 KEGG:ns NR:ns ## COG: PH0232 COG1446 # Protein_GI_number: 14590163 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Pyrococcus horikoshii # 23 275 37 297 305 121 33.0 2e-27 MKQTMIGTWKMAFDGIRRGAAVLREQSVKEAIRTAIQDVEQREEFVSVGKGGLPNIDGHV QLDAAYMDGKTLNFGGVIEMENVASAIEVAASLCGKHCNCLLAGKGAEGYAQEEGFAFAN NLTEASKQRWKQAKKDADLKAYDGHDTVCVLAAKDNEMAAGVSTSGLFLKHAGRVGDSPV IGSGFYSDAMAGSAAATGLGEDIMRGCLSVRVVDLMRAGIAVQDALIQVLDTHMARMKQA GNDCDAISMIAMDTKGNCAAVTNLKEFPYVVAQDGEVTLMVAAYENGVHRCFPADEAWLK QYSGD >gi|312955012|gb|AENW01000046.1| GENE 128 132759 - 133709 1290 316 aa, chain - ## HITS:1 COG:L0018 KEGG:ns NR:ns ## COG: L0018 COG0039 # Protein_GI_number: 15672358 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Lactococcus lactis # 5 307 6 309 314 300 47.0 2e-81 MNEKRKIVLVGCGFVGMSMAYSFLNTGGIDELVLIDVDQEKAIGEAMDLQHGLPYARGKM SIKAGGYEECRDAAVVVITAGVTQKPTETRLDLTARDTVIMKSVTEQIMASGFDGILVIA SNPVDAMTYVAQKVSGLPTERVIGSGTILDTARLRYMMSEYLDVSTSNIHAYIMGEHGDS SFVPWTNAYVGCKNLLDLLDEKGRDLSDLHDIYTNVQQAGYEIVKRKRSTYYGIGLSLNR LVHAILDDENVILTVSAYQNNEYGQEGLYIGVPAVVNRQGIREIVKLDLNEVDQAKFNQS CETIRDINTDAVDPLL >gi|312955012|gb|AENW01000046.1| GENE 129 133814 - 134764 1156 316 aa, chain - ## HITS:1 COG:L0018 KEGG:ns NR:ns ## COG: L0018 COG0039 # Protein_GI_number: 15672358 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Lactococcus lactis # 5 311 6 313 314 313 49.0 2e-85 MSEKRKIVLVGTGFVGMSMAYSFLSTGGIDELVLLDVAKEKAVGEAMDLQHGLPYARGKM EIYAGDYADCRDASIVVITAGAAQKPEETRLDLTAKNAKIMKSVVESIMASGFDGILIIA SNPVDGMTYLAQKVSGLPKERVIGSGTILDTARLRYMMSEYLDVSSSNMHAYIMGEHGDS SFVPWTHAYVGSKSLLELLDEKGKPLSDLHDIYTNVQQAAYEIINRKKATFYGIGLSLNR LVHAVLDDENAILTVSAYQEGEYQQKGLYIGVPAVVNREGIREVIRLKLNEVDQAKFDSS CRTLKEINRDIIDPLL >gi|312955012|gb|AENW01000046.1| GENE 130 135184 - 135534 412 116 aa, chain - ## HITS:1 COG:SA0685 KEGG:ns NR:ns ## COG: SA0685 COG1780 # Protein_GI_number: 15926407 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Staphylococcus aureus N315 # 1 115 1 117 132 63 36.0 7e-11 MTYVYASRMGKTEKLIEKLAIDAMKIENGTETVKGDYILFTYTDGNGVVPNIVESFLENN PDGLKGVVAGGSRERHAATFGWAGDIISEKYNVPCLYKVDGEGSEEDVEKIKQMIR >gi|312955012|gb|AENW01000046.1| GENE 131 135932 - 136975 1232 347 aa, chain - ## HITS:1 COG:TP0053 KEGG:ns NR:ns ## COG: TP0053 COG0208 # Protein_GI_number: 15639047 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Treponema pallidum # 4 347 8 351 351 528 75.0 1e-150 MSDLVRKPLFNEHGDCEVGKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEIN LNQDVKDYRRLREAEKTAYDKTLSFLIFLDSIQTANLPNVGEYITANEVNLCLTIQAFQE AVHSQSYSYMLDSICSPQERTDILYQWKDDERLLNRNKFIGDLYNDFQTHRDGRHLMKTM MANYILEGIYFYSGFMFFYNLGRMGKMPGSVQEIRYINRDENTHLWLFRSMILELQKEEP QLFTEELIEEYKDMLRHGVEEEIRWGEYVIGNHIEGLTMEMVSDYIHYLGNLRSNSLGFG SLYDGFENEPKSMEWVSMYANANLIKTDFFEARSSAYAKSSALVDDL >gi|312955012|gb|AENW01000046.1| GENE 132 136988 - 139504 3101 838 aa, chain - ## HITS:1 COG:TP1008 KEGG:ns NR:ns ## COG: TP1008 COG0209 # Protein_GI_number: 15639992 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Treponema pallidum # 1 838 1 845 845 1060 59.0 0 MKIQKRDGQLQEFEGEKIAQAIRKAFRSTGTLIEESVLKEIIEDITKAAAADKPMLSVEV VQDLVEEELMQHQFYKEAKNYILYRQKRTESRKVVQDLVHALQKEDLYSILADIQQRYPD EGYDLRHLLMKFHSFLKEDMESDERLHMLMKASVELISKEAPKWEYIASRFLSYALHEEI SARMQKLELPVFSKKLKYLEEQGYYGDYIRKAYSDAEIDELGAYLKDERDYLFTYSGLEL VKKRYLMCSHAHEVLETPQEMFMGIAMHLALPEQNRMYWAKQIYDILSQLQVTMATPTMS NARKPYHQLSSCFIDTVEDTLNNIYKSVDNFAQVSKYGGGMGLYFGKVRANGSDIRGFEG AAGGVIRWIKLVNDTATAVDQLGVRQGAVAVYLDAWHKDLPEFLNLRTNNGDDRMKAHDV FPAVCYPDLFWKMAKEDLNATWYLMCPHEIHKIKGYHLEDFYGEEWEERYFDCVQDPRVP KRTMVLKDLVRLILKSAVETGTPFTFNRDHVNRMNPNAHAGMIYCSNLCTEIAQNMKALK LEESRIVEIDGESVVVNESKPGDFVVCNLASLSLGNIDVNNEEELSHIIHVIVRALDNVI DLNYYPIPYAKITNRKYRPIGLGVSGYHHMLVKQNLRFESEEHLQYADTLFEKINYYAIQ ASTALAREKGSYSMFAGSDWQSGAYFTKRGYTSDAWSRLFRQVREQGMRNAWLMAIAPTS STSIIAGTTAGVDPIMNKYYLEEKKGSMIARVAPDLDARTFWLYKNAHLIDQEWVVRSAG IRQRHIDQAQSVNLYITNEFTLRQVLMLYIHAWEYGVKTIYYVRSKSLEVEECESCAS >gi|312955012|gb|AENW01000046.1| GENE 133 139640 - 140599 524 319 aa, chain - ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 17 132 21 137 345 80 33.0 3e-15 MVENFKNRDLNVVVFKDGELQLDVSVCPEENTVWLNRMQISMLFDRDIKTIGRHINNIFK EKELDKEAVVAKYATTAADGKTYQVDNYNLDVIISVGYRVKSQRGIEFRKWANGILKDYM VQGYAVNEKRLQYLNKTIRLQSGIIAGIAGIDADSVLQVVEEYTAALELLDSYDHQSLKK PDGTKCVYQLTYEESREFIDKMSFDSDVFGVEKEPGKVAGILAAVYQDVFSQEVYPTLEE KAANLLYFLIKDHPFADGCKRIAAALFLEFLNKNNALLHNGEKIISDSALVAITLMVAES KPEEKEIMIALVMNFLIKN >gi|312955012|gb|AENW01000046.1| GENE 134 141292 - 141930 836 212 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401951|ref|ZP_06646091.1| ## NR: gi|293401951|ref|ZP_06646091.1| hypothetical protein HMPREF0863_02232 [Erysipelotrichaceae bacterium 5_2_54FAA] # 7 211 7 210 212 203 54.0 5e-51 MDYKIIILAVVITIVLIVGTQVWKQSILKKLLKHMQQGDFNAYFKLLDSLPCKYFYPPFN REYMRLNGYIMKADKKKIEECFELILSMRMNKKQELDVVIKAFYYYLDEDSKKKCKTLLE RMKKIADESITQECQVIYDILLEEKTSYIDDMEKQLKNEELQEAQKGMFHYMLALQYSYL KDEKKKKEHLQAASKDLKGTPYEMKINQLMKK >gi|312955012|gb|AENW01000046.1| GENE 135 142129 - 144756 3103 875 aa, chain - ## HITS:1 COG:FN0245 KEGG:ns NR:ns ## COG: FN0245 COG2217 # Protein_GI_number: 19703590 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 137 874 16 768 769 669 47.0 0 MNKTYRIEGMHCSACAASVEKILKRQPAVEDASVNLVMEEAVVSFTDGFDEKAAMQAVEK GGFHMKERDAAKQQTYRVEGMHCAACSAAVERVLNRFEEIEQASVNLVMNTVRITFTKKN FEAWAAAVKKAGFTLLEEAKKTYRIDVDGMTCSSCSAALEHALNKAEGISAVSINLVTNT ATVEADPHKIKLSEILAIIQNTGYHGTLHVERKEEAVKKDSTSIKIYTTLALAFILLYIG MSHMLGNIRLPLPDIIHYDTHPFHFALIQFLLATVILLLGRHFFTRGFTALFHKAPNMDT LVAVGTGSAYLYSLYSLISILQGNLHAVHSLYFESAGVVVALVQFGKHLESISKKKSTGA ISALLQLRPSNATLLRDGKEVEIQAEEITIGDLLVVKPGEHIPVDGILKEGHASVDESML TGESMPVSKQQGDALIQGTIALDARIVMECNAVEEDTTLAKIIRMVEEAQGKKAPIARIA DKISLYFVPTVMAIAFVAALLWYLSTQDFAFALTIFVSVLVIACPCALGLATPTAIMVGT GKAAQFGIFMKSGEALETASSIDTIVFDKTGTLTIGKPVVTDIAAKDEQKLLSIAASLEA GSRHPLATAILEKAREENISGSALTHIETHNGRGLSGIRDDTTWYAGSRTFLELAGASCD AYAAQELAWLQQGKTVVWIGTSSHIYGIIAIADQLKPQTKDVIRRLRQQQIDVVMLTGDN EITAAAIAEAAGIEHVIAQVLPDQKGEEVKKLQAQGKVVAMVGDGINDAVALTQSEVGIA IGSGSDVAVESADIVLVKDNIQDVETAIRLSKAVIRNIKQNLFWAFFYNTLGIPIAAGVL HLFGGPLLSPVFAGAAMAFSSVSVVSNALRLRNFT >gi|312955012|gb|AENW01000046.1| GENE 136 144773 - 145036 347 87 aa, chain - ## HITS:1 COG:CAC3656 KEGG:ns NR:ns ## COG: CAC3656 COG1937 # Protein_GI_number: 15896889 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 78 1 78 88 80 57.0 5e-16 MNDERKKALQKIKTARGQLDGIIRMMEEGRYCIDISNQISASTALLKKANQHILSGHLHS CVLTAIEERDAEEKVSEIEAVIAALLK >gi|312955012|gb|AENW01000046.1| GENE 137 145033 - 145242 56 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAQRGCVIGIGIQERLIATLRKRHADISRWYSAILFNKGIHKGIGVDSRKGSYYNRNVP GYPLGEVRG >gi|312955012|gb|AENW01000046.1| GENE 138 145381 - 148200 3011 939 aa, chain + ## HITS:1 COG:SP0965_2 KEGG:ns NR:ns ## COG: SP0965_2 COG4193 # Protein_GI_number: 15900842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 284 417 29 156 156 79 35.0 3e-14 MIKKKLYILMLSLLITASLTPVSASEKTLQDDGTYHIVSVEKDGTYTILEDCDTYARAKV LYTLRKRSYDNLAITYGSSFLSLEQGVVEFATAKDCTLNITYTNDENGEEGYTNGCYGID AAFLEYNPGTQKVKFRLSGVTGWADAADVTIYPIEQVPNVSSFTVKNNTLQHQLKSSLAT AAYDNILQLGNAPQQLKEGVTYYSYDTHYFYDDYAMMIEDYRNSSFSHAVNANAPYYNYY QYLNHRSTSAYSQKDVDRYLKDTLALRHTITGFYDKDNYIHDVLTQSLLLQAEAAFFQYQ NQFGANALMMLSLAENESALGRSYLAYTRNNLFGHAAYDSAVEENASRYASTSGSVYSHA LHYLSNAYMNPSQFQFHGGFFGNKAGGMNVSYASDPYWGEKAAQYFYEMDHAMGDRDHNR YALGIVKNTGVSIYKNADKKSDAVYSIKKGYDAALILLEKLENRDGVWYRVQSDPSLDKE QKQQEGSYNFKNSYGFVKAEDVSTVLNSKHIQDKAYVDITFDANGGTFYPNDKKITLQVE TGKTPVIQAPVKDHALFSSWDIQLKPAGEPLTYKATYRDVKQIVLTQMPLTTYDLNESLD VSDGRIRVDFADGTSKEVPMTTDMVEGFSSKKTGTKTLKVTYAGCTLNYEIRVSDELTKK QENMQQRAAAVIKLYDGKTDLNEEALQELEQLRKDVTAFPLTPLANEQIRLIDRILQENL KPRYSVIIKDDSHDLQVSGLSMARIQETGFLNTFLPKTIVLKVKDSIDEEQQALAKKVAR ANGTTVEETFSIEGTDDFSSLKLKQEAVFSIKKPKDSKNKRYHIYYVDGQDVYQIPTEQS KSRIRFTTEKLGSYVLVSANQRSIQEADDIAEVNTIALNGKNYILRYVLLPCLLLALLVC LFLTLFVYRRRHPNLRLKKPWKKAGTEKSQYKKDEDDML >gi|312955012|gb|AENW01000046.1| GENE 139 148280 - 150049 2164 589 aa, chain + ## HITS:1 COG:BH2856 KEGG:ns NR:ns ## COG: BH2856 COG1164 # Protein_GI_number: 15615419 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 2 585 7 598 598 374 37.0 1e-103 MKRNEIDSQLTWDLRFLFENQEAFEAQFALAQKEIKLLQAALSSLADDRASFISFMEHQE TLERYLDNLISYAKMSSDVDPENMQNQENLARSYTLYQQVNQALSNLPLLLIQNREQIEQ WLLEDDCRDFRYPMEEVFRTIPHRLNEEQEALLAQAGELIRNPQETFESFRLQFEPVLVD GKEEFLNEGTYQQFLKNRDPRVRKEAFEHFFTAYKTYQNVFMNLLSGHARGQIFEAGLRN FSNALEASLFEDGVDRSLFDKVLFMANEKYINGIHRYFAVRKQVSGLAVQHVYDIQIPLV DAVDITYSIDESFDILKHALAPLGEDYVQLLDQAREERWIDFLPCAGKQGGAYSGGTYDS RPYVLTNFTNDYPSLSTLAHELGHSMHSWYSRHHNRPMLSQYTIFVAEVASTVNEILLNR YLLDHSDSEEEKAYLLSNLLNQLVGTLYRQPMYAEFEKQLYAMLENKEAVSSQKLTSLYM ELSRQYYGDAVEVDDLQRYHCYYIPHFYFNFYVYKYTLGMSVALSFAKKILAGDTTEYLE FLTKGGSESPLDELIHAGVDPRVDSIYDDAFTFFEKTLDEFSELMKVKR >gi|312955012|gb|AENW01000046.1| GENE 140 150241 - 151212 802 323 aa, chain - ## HITS:1 COG:lin1811 KEGG:ns NR:ns ## COG: lin1811 COG1680 # Protein_GI_number: 16800879 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Listeria innocua # 5 315 11 318 323 216 36.0 6e-56 MEQMKITEMEALINRNYKNICGMNVLKNGVSVYEAYFQGCTSESRMHVYSVTKSIVSILL GIAMDEGYIADVSQRVLDFFPEYAAREKEYAKGEVTLEDVITMTAAYKYRIPPYIKYFTS DDWLQFSLEQLKGRGGKFRYTPLIGPDILTGILQKTTGQSVLAFAREKLFAPLRISVEKE LIFKDKEEQMAFNQSASISGWAADAKGLQSAGWGLALSAKEMADIGQLYLNGGVWEGKQL VSKHWIEESTKEHSRWKKRNLPYGYLWWIDEQKDGFAAMGDGGNIIYVNTGEQLVVSLMC RFDPKAKDSMDLIKQQIEPIFRK >gi|312955012|gb|AENW01000046.1| GENE 141 151644 - 153089 1925 481 aa, chain - ## HITS:1 COG:CAC3274_2 KEGG:ns NR:ns ## COG: CAC3274_2 COG4886 # Protein_GI_number: 15896519 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Clostridium acetobutylicum # 127 475 14 361 394 113 26.0 8e-25 MIIQDEMLRAAIARTLQIEEADITEKKLEELMTLSARSSGIISLEGLQYAVNLKYLDLCG NAIEDLTPIRDLREIEVLNLSKNMLRDIQALREFRQLLRLDISRNNLYTMDISALAGMIN LEELNLERSKVDNLVYLENVKKLKKLYVGIENGPFPLSILGMLEELKELHMNKMWLYDIA DLTYLKHIEVLDVSTNLFCDLSPLQYMKDSLRNLNISNCEYLRDLSILEEFPNLEVLDIS FDHIKDFSFLKKLKNLKDLRATQSGLCDLRNLKGLIRMEKLDISENRVEHTEILKEMKLL RYFKASCCFLKDIDFLKNAKDLVELNVFNNHIKHIEVLKGCEHMTTLDVGNNDIRSIDSL EDMINLECLGLSHNNISDLTPLKDLTNLSTIDLYNNVITDLSPLKKLINLSSLRLDHNGV MDLSPLEECIYLSSLTLKANYVTDVTPLTRLKNLYELRLDENPIEDITVLEDMEYYEKFS Y >gi|312955012|gb|AENW01000046.1| GENE 142 153392 - 153592 247 66 aa, chain + ## HITS:1 COG:lin1992 KEGG:ns NR:ns ## COG: lin1992 COG1278 # Protein_GI_number: 16801058 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 66 1 66 66 86 69.0 1e-17 MSTGKVKWFNAEKGYGFITSDEGKDIFVHYSSIQSDGFRTLEEGQAVNFDVVESDRGQQA ANVTVA >gi|312955012|gb|AENW01000046.1| GENE 143 153692 - 154174 661 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401966|ref|ZP_06646106.1| ## NR: gi|293401966|ref|ZP_06646106.1| HD domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 160 1 160 160 204 71.0 2e-51 MDRLELIREQTDAVIQKLVKEEERKFAYIHTYGVAQAAAMLATLRKLDVELCCIAAMLHD IALYAQNCPHLGHAQRSAEYAKLLLEKMEVFSEEEIRILTHVISVHSDKMNRHDGPISEL LKDADVLQHYLYNPKIELSEKDKVRLFYLLEDLNCAQVEK >gi|312955012|gb|AENW01000046.1| GENE 144 154331 - 154975 544 214 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 2 186 14 195 227 77 26.0 2e-14 MLLGVTGVALGLSFMMKSGLGQTALTAFLQCISLISGMKSGTLLMCFYLLCVLLQLLIQR KDFDKLQVLQLPVCWIQGIIINLTCYDIAFLADIRPVSYPMQWVFLAAGMILVSFGVALT MAADLVKQPFEQLIVVISKKYKKPFNFLRCGADAVFITCSLLLVAVFSLDFTMLREGTWI SMLVLGNTMAVSFPLMQKCSICYRRKNEKKEVSL >gi|312955012|gb|AENW01000046.1| GENE 145 155025 - 155639 563 204 aa, chain - ## HITS:1 COG:PM1364 KEGG:ns NR:ns ## COG: PM1364 COG0235 # Protein_GI_number: 15603229 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pasteurella multocida # 1 192 1 190 210 111 34.0 9e-25 MSELQEKLDAAIWSAHTLFQKGLVSGSTGNISFLHEHRMYISRSGSCFGRLRQEDFAQVD MQGTILYGKPSKEYPMHLALYRESEEYKAVIHTHSFYASVLSCYTDTESHVKNLFAYTPY LYMQTKGNIPCVAYAPPGSDALFFHFKDKTGTKPRILLLKHHGIMAGAEDVYHAFDLIEE MESSAHVYAMLKSCPDEDIDFIPH >gi|312955012|gb|AENW01000046.1| GENE 146 155632 - 156882 760 416 aa, chain - ## HITS:1 COG:STM2917 KEGG:ns NR:ns ## COG: STM2917 COG3395 # Protein_GI_number: 16766223 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 409 2 414 420 274 39.0 2e-73 METKNIKIGVIADDFTGAGDAASFLEKSGAETIMYNAVPNELQVCDAAVIALKTRSVTPH AAVAEVKKAVDFLKENGCERIYFKYCSTFDSTPQGNIGVVADFLLEYLAQPFTILCPSLP VNQRIVKDGNLYVNGEKLSDSPLKNHPLNPMWDSYIPNLMKPQSKYPCFIMRQKELCEGE WKQTIHALKCRYERFYIVPDYETEQDGIRIAEAFKELPVLTGGSGLLPYVLENDALLHPE KNQTRKHGRTILLCGSCSAATRRQIAYFRKHHGCCYPVNANRVMNKELTAQDILTYANQQ AQPVLIYSDAVEQDMRELKKDETFDQASKCIEQIMGEISSAALSFGYERIVVAGGETSGA VIQQLGFDGFHIGKSVDPGVPELIPLKNERLTLILKSGNFGAEDFFIKAIGGNTHE >gi|312955012|gb|AENW01000046.1| GENE 147 156984 - 157826 873 280 aa, chain - ## HITS:1 COG:ECs5069 KEGG:ns NR:ns ## COG: ECs5069 COG0191 # Protein_GI_number: 15834323 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 2 278 3 286 286 195 38.0 7e-50 MLVTMKEILDHAKKGGYGVTAPNVQSEDTVRAVLEVAEEYHAPMIVDVNAFIHTDLPWFI HMIRDLAEKVSVPVAINLDHGKSYEDIMLGINSGFTSIMVDRSSLSYEENVEQTKEVVKM CKPLGISVEAELGHVGMGNNYAVDGVNNLTVPNEAADFIKETGVDCLAVAIGTAHGRYTG TPHIDFERLKQLVEACGDTPLVLHGGSGTGDENLRKAVQSGIQKVNLATELIVAGKEELE GFIKDPNFDKWKLIPAFKKGYKDRLAHYVELFDQAGKAWG >gi|312955012|gb|AENW01000046.1| GENE 148 157838 - 158218 317 126 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEYINKNSITVDALCGRGLIRAVGKNSCFDSDKMTVGYALYKKEYGIMEPHAHAEETVII TKSVNGYVSWGSDAHHLQRTIALEEGMILHIPENEWHAFHYDEGGCVEIVFIYGQGDNCR PEDNER >gi|312955012|gb|AENW01000046.1| GENE 149 158241 - 158882 575 213 aa, chain - ## HITS:1 COG:no KEGG:NGR_b06480 NR:ns ## KEGG: NGR_b06480 # Name: not_defined # Def: hypothetical protein # Organism: Rhizobium_NGR234 # Pathway: not_defined # 12 207 11 215 234 119 39.0 1e-25 MRKKLTILHTTLATTTTIPAMIRELYPDEFDIVNVLDDSLLNDIKCSGRMSASVIERFIQ YACIAKNNGSDALLLACSSLGKAADIARELLDIPLYKIDEPMADQAVESGNNILVLGTVK STLEPTSDLIRSKRKSQEQSVTCILIPDVFELYEIDRERHDQKIAEVIQEHWNTYDVIVL AQASMANAIQYITQGREKIVTSLPLGLKQLQEI >gi|312955012|gb|AENW01000046.1| GENE 150 158927 - 159757 825 276 aa, chain - ## HITS:1 COG:SPy1060 KEGG:ns NR:ns ## COG: SPy1060 COG3716 # Protein_GI_number: 15675052 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pyogenes M1 GAS # 1 263 1 262 275 233 46.0 3e-61 MKLTNNLSREDKKMINSICWRSLNAHCSRVGGQARQMAIGFLWQIMPALNRYYKDQPEKK KEALYRHVQFCNVSNAIYPFLAGLVASMEKENSEVDDFDTSSIVAIKAALMGPLAGIGDS LLFSVVRVIAAGIGISFALQGSILGPILFFLIYNGCTMALRFSLGYVGFISGSSFITNMY QNGTLKILTKCAGILGLIMVGAMTASTVKFTTAISIPIPGGEAVALQSSLDTLFLGLVPL LLTFGCKKLLDKNVNINWIMVGIFVLSLLMAAVHIV >gi|312955012|gb|AENW01000046.1| GENE 151 159754 - 160563 921 269 aa, chain - ## HITS:1 COG:SPy1059 KEGG:ns NR:ns ## COG: SPy1059 COG3715 # Protein_GI_number: 15675051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pyogenes M1 GAS # 7 268 1 262 263 207 46.0 2e-53 MLNVALLSALSYFICYAGNWMFGQSMSDRPIFIGAVTGLLLGDLQQGLIIGATLEAVFMG SVNIGGQISADHSAATVFAVAFATNATLDPEAALTIAVPIGILMGFVTMFVNNIFLTVFT TLMDKWALEGNERGLLIYLNFGVWLAKNLFFAAIVFFGVYVGYNAVEAFVDSIPDVVMTG LTVCGQLLPAVGLALLMKMIWTKEIGIYYLLGFVMFIYMKLPIIAIAVIGIVIVVATAMR DFEINRMKQHPIACADKNDSNEELEDFLQ >gi|312955012|gb|AENW01000046.1| GENE 152 160579 - 161064 537 161 aa, chain - ## HITS:1 COG:SPy1058 KEGG:ns NR:ns ## COG: SPy1058 COG3444 # Protein_GI_number: 15675050 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pyogenes M1 GAS # 1 158 1 162 163 142 50.0 2e-34 MIIQIRVDDRLIHGQIAVVWSKYFATNHLVVANDQAAKNEVQQMTLKMATPNGVKVLIRS VDDAIKVFNNPKSETVKMFVLTNSIQDALKIATNCKVESINVANVGRFEAASEKKQLNAD VGCTPKELEALKEIAKLDMETIHWVIPTNPKISVKKLLENN >gi|312955012|gb|AENW01000046.1| GENE 153 161075 - 162202 921 375 aa, chain - ## HITS:1 COG:CAC1574 KEGG:ns NR:ns ## COG: CAC1574 COG1454 # Protein_GI_number: 15894852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Clostridium acetobutylicum # 12 372 3 368 371 204 37.0 3e-52 MNSSHETKLHLLFRMKGEIYQEADLNICLKNLKLQETDLVITSNSQMKKIKETNALGKAV LLNMDAYGTKEPKEEWVDDILKVANAYPYERIIAIGGGTVIDVSKLCVFGDGRSVQELYS DKREVRKTRELIALPTTCGTGSEVTNVSVVEFPSLHSKLGLQMDALFPDKAILIGELLTS LPYKTFALTSIDALAHAIEALLSPKANPYTDMYARSAISGIVENLQETRKTKKLPQDMQK SLICANMAGVAFSIAGCATMHALSFPLGANCQLAHGEAVYAVFAQTLQYYQKKNIPLYKL ENALKDLPADISSVSGLQKLLTEIYPCPDFKALGIDEGICDTWAVSVYEKQQRLLVNSPC VLNSNDLAAIYKSCI >gi|312955012|gb|AENW01000046.1| GENE 154 162186 - 162608 385 140 aa, chain - ## HITS:1 COG:SPy1057 KEGG:ns NR:ns ## COG: SPy1057 COG2893 # Protein_GI_number: 15675049 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 2 139 3 140 141 83 38.0 1e-16 MKRILLTSHGRLASGLKDTLEFFLGQSEMIAAVDAYVDTSSDYLQQLQRFVDSAEVGKAI IFTDIYGGSVNQQVSAMVMESGKDIPIVTGMNLPIVLSAAMTDDSLTAERMESMLKECQL QLVKMSSCETKEGDEDEFFA >gi|312955012|gb|AENW01000046.1| GENE 155 162856 - 163611 408 251 aa, chain + ## HITS:1 COG:lin0400 KEGG:ns NR:ns ## COG: lin0400 COG1349 # Protein_GI_number: 16799477 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 5 242 4 244 253 158 38.0 9e-39 MINSQRKKEIIEYLSDTDYRTLKDIADKFAISMNTARRDINELAEENLVKKFYGGVSLAR KKDSTFQSRIASHIEEKQRIAKYAAALVNDNDLLYIDSGSTTSLLTDYLHRDFHLTIVTN NIYVITKVIEVVNWDLIVVGSRLKHSSCSLINVYDWDYLNSLNVNKAFLATTGLTIQGGA TNPDNAETIIKTSMMKRSQENFLLTDSSKFDRTSLRTFANIEDFDKIITSGSVPKHFVEY CAAGSTQLIIA >gi|312955012|gb|AENW01000046.1| GENE 156 163625 - 164443 433 272 aa, chain + ## HITS:1 COG:no KEGG:Aaci_2206 NR:ns ## KEGG: Aaci_2206 # Name: not_defined # Def: xylose isomerase domain protein TIM barrel # Organism: A.acidocaldarius # Pathway: not_defined # 1 254 1 251 260 97 25.0 5e-19 MNIGCCIATKDIPLAKEFGYDYVELSAKEIMKMDTELWKLKRKEILHPGIPVLGLSAFAD EQTPLIGPSAQEEVWSAYLDILLERASQLHIKNIGIGAPKARMIPSEYDYGLATREMEYF LYTAARKASSYDITILYEALHPKECNFGNHTQECYQTVQHIHSPNLKLVYDVYHAINAGE QYADSRMCFDEIRHVHINSWDQGLQRYFLFEKDLPYVKDLCVFLQSVGYDNTISVEAFDA DFPETGAASVSIIREALYEAEIKHPLSRTPSL >gi|312955012|gb|AENW01000046.1| GENE 157 164794 - 166128 1293 444 aa, chain - ## HITS:1 COG:FN1469 KEGG:ns NR:ns ## COG: FN1469 COG0534 # Protein_GI_number: 19704801 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 10 433 13 437 440 229 34.0 6e-60 MNHKKQFFKFVIPSVVSMLVFNLYTMVDGIYVARFVGEHALSAVNISMPYVNFIFAFSIL FSVGTSTVVAIFRGENNMKSANETFTRNTIFLTVCALIITLLALVFQNELALFLGASEVT LPYVHDYLGVLIWFTFFFIVSYSMEVLVKTDGFPKLATAAVSVGAVTNIVMDYVLVVHVG MGIRGAAIATGLSQVLTFTVFTIHFLGKRGTIHWCKTTMDLSVYKRIIPIGTADFITELS AGTIIFLFNHAILKHIGDNGVVTYTVITYIYNIVMMTFTGISQGMQPLVSFYRGRREENT CRLFLRYALYSTFAMSMLALAICLFMTPALVSIFIDASRAELFTYTVHAFRIYSLCYLVI GYNIVCSGYFAAVEKSGYSFAISLLRGFVLIAASIWIMGELFQGEGIWYATLVCESSTLV VSIWCMLRSQKKAQIHGEQALQQI >gi|312955012|gb|AENW01000046.1| GENE 158 166192 - 166986 867 264 aa, chain + ## HITS:1 COG:BH3496_1 KEGG:ns NR:ns ## COG: BH3496_1 COG0789 # Protein_GI_number: 15616058 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 111 1 113 117 72 37.0 6e-13 MKTYYKINEISKLYNIGQDSLRYYEELGILHPMRDKNNYRQYTTSDIHRLNVIRDLRNLG FSMKSIQDYLENRTIANSLSFMEEEERIINQKIQELYQLKVDILHRKASLKACQQLPMEA IELMRLPQRKCVALKTDAVHDDVEYQLMKLSKEYEKNIYTIANFNTGFFLDVSDREHIHA SSVFIAGESLQDWEFTLPAGTYLNLYYQGARDKAHEHLKRMLKYCDENGYAIGRHIMEFF VIDTHETRVQEEYITQLQIELENI >gi|312955012|gb|AENW01000046.1| GENE 159 167296 - 167667 373 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167746582|ref|ZP_02418709.1| ## NR: gi|167746582|ref|ZP_02418709.1| hypothetical protein ANACAC_01292 [Anaerostipes caccae DSM 14662] # 1 123 1 127 212 119 41.0 7e-26 MNKTVDIRRFYEEDALALEDVIRKTWKYDAFCSSETAARLAHVYLYSCLANQTFTAVAIV DGKPCGIHIQKHRCPFSLKLQSLLAIVHLLITREGREICSFYGKIRNVDQVLLDGSGKTY GGE >gi|312955012|gb|AENW01000046.1| GENE 160 168130 - 168585 311 151 aa, chain - ## HITS:1 COG:no KEGG:Sterm_4118 NR:ns ## KEGG: Sterm_4118 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 142 1 142 152 110 40.0 1e-23 MGKLPPIAKVYEAYSALADDRIVVKEQEALVDSSDYAKTYTVRFHDDEVSSNDNATVWQH YPGYPILAVWMKLGILSVNWNILPAFAGINWKKRNTEHKNRYEEVIEEFLSECEEQGYAC EDIRSCMQETLEAVAKLSYTIKGNRAPMIRK >gi|312955012|gb|AENW01000046.1| GENE 161 168926 - 170017 1422 363 aa, chain - ## HITS:1 COG:lin0304 KEGG:ns NR:ns ## COG: lin0304 COG3839 # Protein_GI_number: 16799381 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Listeria innocua # 1 362 1 364 366 475 66.0 1e-134 MADLSLRHIDKIYDNNVQAVFDFNLEIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISAGE FYIDDKLMNDVEPKDRDIAMVFQSYALYPHMSVYDNMAFGLKLKKTPKEEIDKRVREAAR ILEIEDYLDRKPKALSGGQRQRVALGRAIVRNAKVFLMDEPLSNLDAKLRVQMRSEIIKL HERINATTIYVTHDQTEAMTMADRIVVMKAGYIQQIGTPKEIYNNPKNMFVAGFLGAPAT NFLQGTYQGNAFICNDQRIEMPDMFREAMKPYDGKEVVMGIRPEDLHGEGIVADTYPTSH FMFDVEVSELLGHEFILHGRFGKQRLEAKVAARIEARPHEDIELAMDLSKVHFFDKETEE TII >gi|312955012|gb|AENW01000046.1| GENE 162 170033 - 170203 304 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no METNIVKNIIMAVLFFVFLGMIVIGQKTVGLGNLGLEIAGLAGLLAELYVYNRKYK >gi|312955012|gb|AENW01000046.1| GENE 163 170203 - 172374 2442 723 aa, chain - ## HITS:1 COG:no KEGG:BCAH187_A2105 NR:ns ## KEGG: BCAH187_A2105 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus_AH187 # Pathway: not_defined # 1 719 1 716 723 1021 66.0 0 MKKTFGRVTLPGESNFLEETKDLLERWGADAIRDSDGTKLDEGIRNLDAKIYTTYFVARG HNEFAEQHMEECQQIYLMSAYTLAAGEDVRIAFAAEYFDQQVTPDYDHDPKQWWEVIDRT SGAVVAADDWELDQKHHTVIVHHAQPFHEYTVSFLAYILWDPTQMYNHITNDWGDKPHEI PFDVRKPYSRDYVVEYLKHWLQEEENKRCDIVRFTTFFYHFTLIFNQHAKEKFVDWCGYG ASVSTEAILAFEQELGYRLRPEVFVQNGYYNSTFCVPTKEYRDYIDFTQRFVSERAKELV DLVHEAGKEAMMFLGDNWIGTEPYGAYFPSIGLDAVVGSVGGGATLRLISDIPGVKYHEG RFLPYFFPDTFHEGNDPVIEAVDNWLSARRAIMRKPIDRIGYGGYPSLAYKFPKFVEYIE KVCEEFRQIYDIVHEQTPYCGLKVAILNHWGALRSWHAYMVAHGLYCKQIYSYNGMLESL SGASVDVTFISFDELLEHGIPADIDVIINAGDANTAFSGGDIWKNEMLVSMLRAWVYSGH GLVGIGEPTACEHGGRFFQLADAFGVDKELGFTLHTDKYFHTPADSHFITEDVVEPLDFG EGMKNIYALYEDTEIIAYNDGEVNMAAHAYGKGRCVYIAGLPYSTQNTRILLRALYYAAC KEEAFKKWYADNLYCEVHAYPQSKQYAILNNTNEIQETGVYDGEGNCKHVTLQPGEIRWM VMK >gi|312955012|gb|AENW01000046.1| GENE 164 172388 - 173254 1253 288 aa, chain - ## HITS:1 COG:BS_yurM KEGG:ns NR:ns ## COG: BS_yurM COG0395 # Protein_GI_number: 16080311 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 11 287 30 299 300 142 33.0 8e-34 MNKKKMSSHAWYKIFVYVAMIVFAISIIVPVAWVFLSSVKSQLDLVGDPWSMPTQFLWSN FVDAMEKARMGEYFINSVFVTVLGLIFLLVLALPASYVLARYPFKGKKFFNALFMAGLFV NVNYIVLPIYLMLFQADQLLGVEVFLNNKVMLALVNAATSLPFTIYLLSGYFKTLPKAYE EAALIDGCGYFKTMTKIMIPMARPSIITVILFQFLAFWNEYIMAFTLMDKDNATLAVGLK FLMADQRSQANYGVMYAGLVIVMVPTLILYICVQKKLTQGMSLGGLKD >gi|312955012|gb|AENW01000046.1| GENE 165 173267 - 174148 1187 293 aa, chain - ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 15 279 13 279 292 141 36.0 1e-33 MNKKKAQRRFVFACLAPAVILVILFMVIPTFNVFRYSLYGKTGIVGDAPFVGLNNFKILF TDSRFIESMQNMILIIVMVTLFTVVLAVLFATLLTREEFKGKNFFRVIFYIPNILSIVVI AGIFSAIYAPDNGLLNSFLEMIGLGMLQKQWMGDSGIILYSIIFALVWQAIGYYMVMYMA SMSSIPENLYEAAALEGAGKVKQFFMITLPLIWNNIRTTLTFFVISTINLSFMFIQINTN GDLGSEVPLNYMYNKAFGGNYSYGMAIGVITFIFSFALSGLLNKITERDVLEF >gi|312955012|gb|AENW01000046.1| GENE 166 174222 - 175556 1183 444 aa, chain - ## HITS:1 COG:PM1762 KEGG:ns NR:ns ## COG: PM1762 COG1653 # Protein_GI_number: 15603627 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Pasteurella multocida # 1 386 3 376 451 64 23.0 4e-10 MKKMVALACVGLMAASVVTGCSSKKDDASSGSDGEKRIVKFDAFSGGNGEEVWKEMAKAF EAKNKDVKIELRFEKDLPAVLNKENSKGEYSDIVYYNLGQQSQFTETQLNSKKVEDISDV FADENVKKNINPDFVNNPVSQFYGDGKNYLAPIMYTPGGLYYNANLVGEGKKYEIPQTWD DMFKLGDQLKEEGKISLFTYAQAGYLDNTILSVIQEAGGQELLSKLLNYDAEAWNSKEGK MVTDTIGRLVKDYMEPNTVANANVKDGFTKNQQAVIDGKALFMPNGSWVVAEMEETTPKD FKWGVSAVPALTKDGKKAITTFTEQCWIPSEAKNKDDAKAFLKFIYSEEGANIMLKYNCV VPVNGITDKLTGVNKELYNVYNDENVTAVIGAFAPFDSAAIPDVDMKKVLCFTADDINTG KTTAEKWNSELVKTWKTISEHPVK >gi|312955012|gb|AENW01000046.1| GENE 167 176112 - 176513 240 133 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYASYLYYLLYPYLMLLSQYPIHTAYKNMMQTYDFTEYYLVFSTVFLLTGISVFLLYHC YQAIQPRIRYGIELVNLILFGSYVYSFFSGNQLLPVFSILLVSDFARGLTMVYAGFTLCD VIKGAISKIHPVS >gi|312955012|gb|AENW01000046.1| GENE 168 176656 - 178113 1359 485 aa, chain + ## HITS:1 COG:mlr3684 KEGG:ns NR:ns ## COG: mlr3684 COG3119 # Protein_GI_number: 13473175 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Mesorhizobium loti # 6 376 9 395 522 174 34.0 3e-43 MKQNVNVLLIVCDQFRGDALSFANHPDVKTPYLDSLAADGVFFSHAYSATPSCIPARAAL MTGRSQKRHGRVGYLDEVEWRYQHYMAEEFSNSGYQTQCIGKMHVHPPRLTCGFQNLQLH DGYLGCYRSLNIPHWMHQDVSDDYLQDLRNVLGEDADINTSGAECNSWVTHPWIYEERLH PTNWVADKSIRFLKTRDRTRPFFLMSSFVRPHQPLDPPKAYFDMYKDKELRSPASGDWDP QNGAGAAGRISDSIYGCCDAAMRKDAMAGYYAAITHVDHQLGRILTTLKEDGVYDDTIIL FTSDHGEMLFDHNLWRKVFPYEGSTHIPFLVHIGKHIADIVPHTINGITELRDVMPTLLD LCGLQIPDTVDGCSLKGCILQEAESVRSYLHGEHSFHDKLSNHYIVTQQDKFIWYSETGE EQYFDLSRDPQETHNAILDEEYQSRISELRGILIQTLENREEGFSDGTRLICRKAQDILQ NVHDY >gi|312955012|gb|AENW01000046.1| GENE 169 178560 - 179960 1568 466 aa, chain - ## HITS:1 COG:BS_yvqB KEGG:ns NR:ns ## COG: BS_yvqB COG0642 # Protein_GI_number: 16080355 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 126 459 120 451 451 186 33.0 1e-46 MKRFNEFVKRLSLTQQLFALIFFFVTFFAVFFFVYINGNVTTVIREQMYGTLDSTLQSWA MSDSTNDEQRQLINSAAGIDIFMVRVDKTLDGATHVTLAGKNTSDMDLNSSEWKAIAQDI LSINARYTAGDKIHHGIVKKVSGDRDSYYSIYKVADDQLLVSKMYSDNMGKLENSLINSV VYITVIVVGFFFIIMMMWVLTLIHPLNQIRNYIERVKLGKDADLRVNRRDEIGELADALV SMREELRKQEKTKEEMIHNISHDLKTPIATIKSYGESIKDGIYPYDTLEKSVDVIIENAD RLEQKVHSLLFMNRVEYLISQDCEGIGSNMEEIVETVVQNTRFIRSDIQILTNLEEVYFD GLAEPWRVVVENIIENALRYAKTTIDIHLSEEEGLTISNDGPCMDEDRLKVLFKPYEMGK GGKFGLGLSIVAKVVSANGYEVVGENMAEGVIFRIYKPKNPVKKGR >gi|312955012|gb|AENW01000046.1| GENE 170 179960 - 180619 971 219 aa, chain - ## HITS:1 COG:BS_yvqA KEGG:ns NR:ns ## COG: BS_yvqA COG0745 # Protein_GI_number: 16080354 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 1 218 1 222 225 214 50.0 1e-55 MKKVICVVEDEKAINDLVNQYLKKEGYEVRSYYTYEEASAHVMDDDVHLWILDIMLDDKS GFDLIEEIRLQGRDIPVIFMSARDKEFDRIIGLEKGSDDYITKPFSPKELVLRVNNVIKR VYKDDNNRIMVDGYELDEEQRKVFDHGVEIDLTTKEFDLLMLFIKNKGMAFNRDKILTSV WEENYFGSDRVVDDTLRRLRKKLPNLNIHTIYGYGYRLG >gi|312955012|gb|AENW01000046.1| GENE 171 180809 - 182143 1791 444 aa, chain - ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 1 444 1 447 448 427 50.0 1e-119 MGKYFGTDGARGRANDTLTLDMAVKIGQYLGWYYGKNRHAKILIGKDTRLSSDMFEMGLA AGATSCGASVYLLGVCPTPAVSCLIQKEHFDCGIMVSASHNPFHDNGIKLFNGDGCKMNP EIELEVEKYIDNEVSIEVAHNEKIGSVIEWEEGLELYESWLKEIVPMDLSGMNILLDLAN GSATSCAAETLSELGATVEVIHSAPNGININTKCGSTHPEELQSMMKEGNYHVGFAFDGD ADRLIAVDEDGNLIDGDHTMYICGCYMYDKGILHDDVVVTTVMSNLGLYHALKAKGLKYE QTAVGDKYVFECMKEHDYSIGGEQSGHIIFHAHANTGDGLLTAMKLLEIMVDTKKSLKEL CADLFIYPQLLINTPVHDKHAALEDKELLAAVDAVAQELGDEGRILVRPSGTEPLVRVMV EAKTDALCAEYVNRIVDFIKEKGL >gi|312955012|gb|AENW01000046.1| GENE 172 182163 - 183545 1620 460 aa, chain - ## HITS:1 COG:BS_ybbR KEGG:ns NR:ns ## COG: BS_ybbR COG4856 # Protein_GI_number: 16077244 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 51 456 1 415 483 166 30.0 1e-40 MAKKKKKTQLSSEGKTELAKAIAEKSQTFARTYANVEIKVGKFFRWISGWLDKLLFNQKH GKVVALILAILFYVTFNSQGANFLENVKSAEDLGEFPVSQVLSNQAYEVSGLPETVKVRI IGDLTDIKSVKQQKNFKVIANMTDLTEGTHEVKLTTEAMPARVEVVLEPSTVVVTIKKKS IRRFTVGYDFVNRQQMDSIYDLGEPQLQQGEVLVRSDSDTLDKIAFVKALIKVDKDVKTD FETKANIVAYDADGNLMKVDIIPDTLKASVKVTKPSKDVPITLNPTGVIPNDKSIESYKL DKDHVTIYAKQSVLDNINEIPITIPASTLTSDREISMPIIMPNGVTKISSNIANISIKLT DTKERVIRDVPIAFKNSIDGLNFTVAQGSSSSVDVTVKGAKDIISKIKKEELQVYVDLSK IEKAGTYEQPLIVEGKNKLATYVLKNGSVKVTATGSVADE >gi|312955012|gb|AENW01000046.1| GENE 173 183545 - 184945 1615 466 aa, chain - ## HITS:1 COG:lin2225 KEGG:ns NR:ns ## COG: lin2225 COG1624 # Protein_GI_number: 16801290 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 5 296 3 273 273 213 38.0 7e-55 MLNYFTLNNLRELIQQLLDIACVWALVYYCLKIVKNNSRTIQIFKGVLLIVIIRSAASFL GLHTVANLADSIMNWGVVAVIIIFQPEIRSILEKIGKTNVFSRISTLTINERENLVDELV KACAEMSKTKTGALISIEQGHSLSDYIKTGTPMNSVVSSELLCSIFQYGTPLHDGAVIIQ GVKIACAAAYFPPTTRELPTSYGARHRAAVGISEITDSITIVVSEETGNISIAEGGKLTV ISEASLREFLMNVVCKQQSTAVHDNQEEPAEQVSTPPPYDGKKPGVFAHYFKGKNKRTKK EAADKRYTKKKKSEEQDKKEKDVVVVEQEVDRLHIEDLTQKQDEKLDALFENIVTDSEKK EESAAEADEPKPKKRKTAVRKKPAAAVKEESQKAAEETKPVKKTRRKKKAEPKKEPPKEQ TGKTIMTNMASDLFNDVIEPEAIVLHYVKADEDEETPEKAKERRDS >gi|312955012|gb|AENW01000046.1| GENE 174 185612 - 186010 174 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLWALLDVIGIGIDESEYVKNGMLFVSWKTIMFYIMLILGSTVLVQWHNRRSFHRILGA WYTYLIAYGVLAVGFKFVLYLLSSCFHVSTGMLSIPLWLLALLAISCILSWIAYHFLLEK QFRLYRGMQEEA >gi|312955012|gb|AENW01000046.1| GENE 175 185950 - 186294 229 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTGNEYNDKANLNHEYMIVYQDMLRYLSSKDISLLVARDIRDDILAMALESQTRGLKVEE AFGDYQKIVMPSVRMRYRKHGWKSCCAGGGCCPPFWYCGRCLMLSESESMRANM >gi|312955012|gb|AENW01000046.1| GENE 176 186284 - 186622 452 112 aa, chain - ## HITS:1 COG:CAP0153 KEGG:ns NR:ns ## COG: CAP0153 COG1695 # Protein_GI_number: 15004856 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 104 1 105 115 108 50.0 3e-24 MYDKTQLMRGSLEGCILKIIEQHMTYGYEILMNMKEAGWIDVTEGTLYPILLRLEKLHYI RAEKRDSPLGPRRKYYQITAEGRVYLRDFYTEWSKLAKTIDKLFEGGVNDDR >gi|312955012|gb|AENW01000046.1| GENE 177 187010 - 187780 1026 256 aa, chain - ## HITS:1 COG:FN0869 KEGG:ns NR:ns ## COG: FN0869 COG0561 # Protein_GI_number: 19704204 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 221 7 229 270 63 25.0 4e-10 MKILASDYDGTLRTEELVDINDVHAIHEFRAAGNMFGLVTGRSMESIQTEIQKNKIEFDF IVANNGGVIYDRDFQRLQVLYMDFNKALDIIAYIKTLDCVSYVINDGFHRFKFSVDENQI DHKYGNMPDTNEHEEEVLDRGKISQLVVSLNDTMLAEEISHYINTNFKGYAVAYVNVNCV DIVPEGVSKAEGLYFIEQHLGLEHDAIYAIGDSFNDIPMIEEFHGCAMMHARSAIVEPAE HVFISIEECIAFLMKL >gi|312955012|gb|AENW01000046.1| GENE 178 187888 - 188049 149 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914177|ref|ZP_02076399.1| ## NR: gi|160914177|ref|ZP_02076399.1| hypothetical protein EUBDOL_00186 [Eubacterium dolichum DSM 3991] # 1 53 1 53 53 79 92.0 7e-14 MAQKKYRPGMNCEKTGKYTCYDKDGNEMYGDVDVEKGRRFPPSQEEGCYYEEQ >gi|312955012|gb|AENW01000046.1| GENE 179 188131 - 190344 2697 737 aa, chain - ## HITS:1 COG:VC2043 KEGG:ns NR:ns ## COG: VC2043 COG0550 # Protein_GI_number: 15642045 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Vibrio cholerae # 1 574 1 579 647 346 36.0 8e-95 MRSLIIAEKPELGRAIAAAIDGSGKEVRGVIRKQNVIITWAYGHLLRLCEPDEYDGKYKK WKKEDLPICFENWKLVPDGNKKDRVEQIMALMQECDQIIHAGDPDDEGQFLIDEILDYAQ NEKPVKRVYINDNTPANIKKAFHDLIDNDEKLRAVGRSAYARAVADYVVGINYSRLFSLL LRRKGMSVGRVQSPTLGLIVMRDEAIDHHVKQKYYELHTGGHIAEPDTSIRFQLKPKSDL LDDGKHILHRNIMEDMERDIMAKPDQKVKIDEKFMDVKPPLPFNLAKLQAHMNARYGFDL SKTDQITQTLRDRYQAITYNRSDSQYLKEEHFQEADKVLPHVMSKLNEQYPVDYKLHSEC FNDKYVTAHHAIIPTMSDFNIAQLLPDERRVYEEICRYYIMQFLPPIRKRQLSAIIKTEY GDLRATSTYVLDEGYKKYFTPEKEDSQEEEEDDSRFDLPKGTYPIQLVSSELQEKETNPP KRYTQASLIRDMTSIAKYVQDKEIKDILKKKDKDKKGENGSIGTSATRSQIVETLIKRRY VEMKGKNIISTQLGKDFYHLLPEEIKKPDLTAKWWVIQEDIKEGNADVKTLVDSVLEAFV PHLKKDYSHLRVSGEVEIDDDRKAVGICPVCGNKIVENSKGFGCVNYRNGCKFALWKEDR FFQSIEKEVTLPMAEKLLKDKYCLVKLKEGEQEIIKVLQLGVRNGRAVYRLVDVPKKDTS AKQSDAEAALHAEQKKT >gi|312955012|gb|AENW01000046.1| GENE 180 190787 - 191953 1555 388 aa, chain - ## HITS:1 COG:lin2956 KEGG:ns NR:ns ## COG: lin2956 COG0111 # Protein_GI_number: 16802015 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Listeria innocua # 3 384 4 388 395 375 49.0 1e-104 MKIKLFNKIADAGINQFDPSAYEFSEDFDTYDAIMVRSAKLHDVEFPADLKCIARAGAGV NNIPLDRCSEQGIVVFNTPGANANAVKELVMAGLLMSSRKITKGIEWVKTLEGDDISKAV EKGKSNFVGPEIAGKKLGVIGLGAIGVLVANAAAAMDMEVFGYDPFISVKAAWTLKARVH HVQNLKQIFEECDYITVHVPFSDKTANIIDAEAIAAMKSDVRVLNFARGGLIDDEAMMKA MDEGKIAAYVTDFPTKELLQYEQVIGVPHLGASTPESEENCAVMAANEIMEYLETGNITH SVNLPDMQLAQECKYRICIINKNVPNVVGAITTALANVGVNIENMANKGKKDYAYMILDT NDEVSEELMERLRSREGIINARLITAKA >gi|312955012|gb|AENW01000046.1| GENE 181 191965 - 193050 1451 361 aa, chain - ## HITS:1 COG:PA3167 KEGG:ns NR:ns ## COG: PA3167 COG1932 # Protein_GI_number: 15598363 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Pseudomonas aeruginosa # 5 360 4 360 361 392 53.0 1e-109 MAENRIYNFSAGPSMLPLEVLKKAQSQMLNYEESGMSVMEMSHRSKAYDAIITKTQERMR SIMNIPDNYKVLFLQGGATSQFSMVPLNLLQKGTADYIVTGYFANKAYAEAKKYGEIVLA GSSKDADYSYIPAQQELQLNKDADYVYLCANNTIYGTEWKYVPETNGVPIVADMSSDILS KPVDVSKFGIIFAGAQKNMGCAGLTVAIVREDLIGYAKDFTPVMMDYAPLADKDSMYNTP PTYAIYILGLVLEWIEQMGGLEVMQKRNEEKAKLLYDYLDNSAFYTTTVRREDRSLMNVT FRAPNAELDALFAKESAAAGMSNLKGHRAVGGMRASIYNAMPLEGVQTLIAFMKKFEEEH K >gi|312955012|gb|AENW01000046.1| GENE 182 193296 - 194060 806 254 aa, chain + ## HITS:1 COG:CAC0093 KEGG:ns NR:ns ## COG: CAC0093 COG0583 # Protein_GI_number: 15893389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 6 252 5 252 290 120 31.0 2e-27 MLDFRLYTFLTLSETLNYTKAADILCITQPAVSQHIKYMEKEYDCKLFFYDGKQLNLTAQ GKLLAEKVRTMVADEKMIRSLLKQNQKTPALRFGATLTIGEFILPQRLNSFLAEHTETSL CMIVENTATLLQMLNSGDIGFAFVEGYFPKQTYDWKLLSQERYVAVKGKHYTLQKEVRCL KDLVQETLIVREDGSGTREILERGMQEINLSIASFQRVIEIGNVQAIKTLVRNNQGISFL YEAAAREEIENRPV >gi|312955012|gb|AENW01000046.1| GENE 183 194189 - 194377 75 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGHRHITFYSYKPQIFREISYTALCLRSFTTQSSLIFWLLDIRHGMKILSGNEARCQGAE QV >gi|312955012|gb|AENW01000046.1| GENE 184 194502 - 194834 384 110 aa, chain - ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 4 109 5 110 110 92 49.0 2e-19 MIGITDSLLIIAVAAVCTFLTRALPFMIFKNAEALPRKIVYLGNVLPMAIMLCLIVYCVR NTSFFQYPYGLPELLGIGSVVLLHVWKRNNMISIIGGTLLYMVLVQLVFV >gi|312955012|gb|AENW01000046.1| GENE 185 194831 - 195520 813 229 aa, chain - ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 5 226 30 251 254 155 35.0 5e-38 MKIAKEALRLSFPVMVGYVFLGIAFGILCQQQGYSMLWAFLISLSVYAGSMQFVLLTFFH AGFSLVEVALVTLTVNARQLFYGLSFLKSFPAMGKKRWYMMFSLTDETYSLLCAIPNKES REGKQLMFCISLFDQLYWIIGSVLGATIGSLLAFDTTGIDFAMTALFTVIFVEQWLAAKQ HGAVYIAIAAILISTALFQLSNFLLPALILLVILLVIFQDKVEKKEDAS >gi|312955012|gb|AENW01000046.1| GENE 186 195696 - 195989 106 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAVCLCMQITYLPLHTRYRYGFKDSFEEGMEEGIIKGFKQKVERKGKRGIKKGRLEGSC YFRSRQSETKFHDIRLPRLYTLQQSRLNKFSALCLLS >gi|312955012|gb|AENW01000046.1| GENE 187 196437 - 197492 834 351 aa, chain - ## HITS:1 COG:PH0756 KEGG:ns NR:ns ## COG: PH0756 COG3839 # Protein_GI_number: 14590626 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Pyrococcus horikoshii # 1 348 1 356 357 273 42.0 3e-73 MSKLLLKNITKSYGDIKAVRDFHLELSEKSFIVLAGPSGCGKTTLLQLVAGFLTPDSGEI YIDDQLVNQKTPAQRNISMVFQEAALFPHMSVLENITFGLAHSGMKQQDIKEAVYQICEV LGICDLLERKARDLSGGQKQRCAIARALIRKPSLFLMDEPLSSLDARLKTQLRIEIAQLY QKNSATFLYVTHDQMEAMTLADILIIMKDGEIQQMGNPIAIYQNPINLFTASFLGVYDIN QFTAVLAQGELFFHEQKIPWLSDDKNLSVILAVRCEHVIEVSTGGICGSIVLVEQSGEQV YYHIQYEEGVVIMKSDTSHIHQRMENIRFWIDWEYVLLFDACTQNRIYKMK >gi|312955012|gb|AENW01000046.1| GENE 188 198169 - 199422 500 417 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402001|ref|ZP_06646141.1| ## NR: gi|293402001|ref|ZP_06646141.1| hypothetical protein HMPREF0863_02282 [Erysipelotrichaceae bacterium 5_2_54FAA] # 4 305 5 306 309 203 39.0 2e-50 MNVSRDRLSVIGKLIGIYREERRMNTQNSFTLKKFCDGICSINTLKSIEAGGLSRSEDVY IELLDKLDLKFGEFPVIDEALRKVISNLYDAIEYYDSELIDVLTIKIINILNKVTDFVFY SEIAVLIESVRNYYVNDEYIDYKTANRLIMMLPVLGHLFSDLIKVLVFSKMKNESVCDKV TYKKLVDDLELQKCEHHFMKVNLLHYFYVSSQYVHMLNLIEELETIFINERNNIRLLDTY NYVIILLSDIDRKAELIYIQKINDLLKMYDYPDVKVGETHSNLGTAYYLMKDYEKAIYHY QLMLDYYDEFFIVNYIYMADCQNRLDKKIDIPKLSDSNLRKSPINLRVMYKYFTLPSTVP AFVKQNYIFKKVLPYLYDDEIIDIFRFEVTKLIEVTNQYKQLHIFDVRIRENKANVS >gi|312955012|gb|AENW01000046.1| GENE 189 199679 - 200746 775 355 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2192 NR:ns ## KEGG: EUBREC_2192 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 4 184 19 191 211 64 29.0 6e-09 MTTKMKTEAASMISCYDHKKKYDMYCKKLLSNKQILAYVMKGCVPEYADTPLEDIPSYIE MSSINTADCEYIDDHQVEVTDEAIPGAQIKYDIQFEATIPMKQKEADKSTPADKKVRMII NLESQAKDDPGYPLIKRALYYCSRLMAKQKHPKNGFQHSDYDRIKKVCSIWICIGHNNQK NDVINTYRIQETCETKIWHAAKEDYDLLTAVMVYPKKEGIRKAQDIPNAVEQQDENKQRL LELLKILFIKNLVIEDKKEQLQKTYGILMEKEIDQEVMDMCNFSDFIEQRGIEKGLEQGL KKGLLQGKAEGKVEATLLHVKKLMQSINVSAVDAMNMLDVEDDIRPAILQSLQLS >gi|312955012|gb|AENW01000046.1| GENE 190 201232 - 202062 734 276 aa, chain - ## HITS:1 COG:no KEGG:TDE2741 NR:ns ## KEGG: TDE2741 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 33 223 16 205 259 70 26.0 6e-11 MNHISDTTDIGITFQMTLDAFLDETHPVKDTNQNTYRDALKKLEEANHCRSSQKKQTIAR EALGICTDCIEAYLVLGINEQNMYRKLGMLKEGMELATMNLGKDFFLRDASDFFEFDEAK PLFHIKFAYAASLYEAGYMRKAQRQFQEILNLNPEDLFQVRHYLMSIALYFEELESCREL LDKYRRNDAFCCFIRFLYLMKEEDFEQAKQMISLLKEKNSFLYDILTYRSMNAVVTQGLP LEGSLEEAGYIYRIISKVVQPMEYLHIFLVKNEANG >gi|312955012|gb|AENW01000046.1| GENE 191 202112 - 202651 543 179 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402003|ref|ZP_06646143.1| ## NR: gi|293402003|ref|ZP_06646143.1| hypothetical protein HMPREF0863_02284 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 173 26 200 203 118 35.0 1e-25 MPEMEPQFRKELLEGVFFKKACPSCGKINTFLHTMIYVDKKHRFVLLVKPKSDLTDKDFS IFQSEKNCIRRYLCDPSQVAEKIRMLEDKLDDRAMELLKLKIILREKKKGRLPKNVVYQD QETDTIWFHVQHDEEEDVIGIWKTSYDAICSKLPPQKNQFEEIDSYWAVDYLKQSNESH >gi|312955012|gb|AENW01000046.1| GENE 192 202908 - 204701 2004 597 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 597 1 584 584 563 47.0 1e-160 MTVIEKLKQLRTLMKERNMDVYMIPTSDFHETEYVGEHFKARSFMSGFTGSAGTLIVCRD CAALWTDGRYFIQAANQLKDSTIDLMKQGEEGVPEIPAYIREHMRENGVFGFDGRVMNTR LVHDIMEELKDKDVTISAQEDLVGMIWKDRPPLPTKKGFFLEETYSGKSTKDKLADIRTV MQEQNATHHIVTSLDDIAWMMNMRGWDISCFPVMLCYLVITHNENHIFIDENKLDEQMLA NFRENAVAVHAYDDIYAFVKTIPADACVMLNTGVVNYAITQNLKKEIRIIDCPNPSQLMK ARKNEIELENNRKAHIKDAVAMTKFMYWLKNNIGKETITEISASDYLESLRRKQEHNLGL SFSTISAYKEHAAMMHYSASEETNVELKPEGMLLVDSGGQYLEGTTDITRTFVLGPISDE IRTHYTCALRGMIQLSRAKFLEGCRGMNLDILARGPLWEMGIDYKCGTGHGVGHLMNVHE GPNGFRWKVVPERNDSCVLEEGMTQSNEPGVYVEGSHGIRHENELVVRRGEKNEYGQFMY FETITFVPFDLDGLDVDLMTRYDIAWLNAYHKEVYDKVSPYLNEAEKEWLKYATREI >gi|312955012|gb|AENW01000046.1| GENE 193 204814 - 205245 430 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRDMVYIRIATALSVLLITFSMFRLWENSIALKEGIRVTTDALHMEMKQKLNSILTYKG TTCVHVEGDTANLENTYLDMKVTAYDTQTKQDVSDTLDTKIYDTGMQLKGAHPIVIIMQG DADRLNDREIMIQLTAQLEQANF >gi|312955012|gb|AENW01000046.1| GENE 194 205295 - 206119 725 274 aa, chain - ## HITS:1 COG:no KEGG:CPF_0493 NR:ns ## KEGG: CPF_0493 # Name: sipW # Def: signal peptidase I (EC:3.4.21.89) # Organism: C.perfringens_ATCC13124 # Pathway: Protein export [PATH:cpf03060] # 1 172 1 171 174 67 31.0 4e-10 MRNVIKRIANIVFVVVVLLLAAYTFLMAKYPEETAQITGYRLYAVLTDSMEPRIPTFSLV CTKVLDPEEPLHLKKGDIITFKADRFGDDILLTHHFNKTEKDFQGNTIYRTNAEGKDNLD MYKTLRKDIVGTYVFHIPFIGKIFLFLKSKFGILLYAELAVIWLFNKTIRTRWAEKEQVL KKQKTLYVDAVEFEELEGHCVLNGELHNDTKFAVRFVKAEIQLYDEQRNLIKTDKWFLTG KDSIPAGTHQQFNYTIYDVKDARYYKIHILSYKK >gi|312955012|gb|AENW01000046.1| GENE 195 206221 - 206751 272 176 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSTLLSLLTAGAVIATSAGTFAAWDQTKGTATSEVLNFRAGVTTTVTAANFTETNAVI GEDPKFTSTPTIEVKNIPDSVDPTAYNIKVSAYAFDTVAHANDAAKVSDPSTSTGYLSSV TTTVTDSEKKLSEATNGKITPTITATTTNDTENTAGTATTAYILVVAELTPDNSAA >gi|312955012|gb|AENW01000046.1| GENE 196 206887 - 207678 843 263 aa, chain - ## HITS:1 COG:SP0676 KEGG:ns NR:ns ## COG: SP0676 COG0583 # Protein_GI_number: 15900577 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 258 63 316 322 62 23.0 7e-10 MGKELIIRSNNGVTLTPTGRLMYYYAQSILSQFQVLERLKDVSEEKLYSKLTVSVDSVFL RDDLILQFYKHMKSATTEIHMVETTAEQVLANVSEMKSEIGIMILNDYQLSIYRKMADAK EIELNILGKGPLYVHINEKNLDELVEEKEARDFLDFTLIHLPYDFFSNLNMSLTMDGVQL SSFKKTITMSNYHAIINMLNHTDAFMLGNKWQIEELKHSHIHSMRIRNCDIQKYFVIIRR KREVLSEAGKVFLNIIHETYADM >gi|312955012|gb|AENW01000046.1| GENE 197 207682 - 207804 92 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNQQLRYFVEVVDSGSINKASEKLFVSQPSLSRSIQSLE >gi|312955012|gb|AENW01000046.1| GENE 198 207901 - 208341 348 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401249|ref|ZP_06645393.1| ## NR: gi|293401249|ref|ZP_06645393.1| phenylacetic acid degradation-related protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 146 1 146 147 160 49.0 3e-38 MDKKQFHERIQYFVKQRVRDEGTINSMMDMELVTADFHTKSVVLAFPVKDWQMNPAENLH GGIIATALDITMGCISYVSGNAVFTPTIQMAVNYVGGVSSGDTLLVEGICDHAGSRMSQT RAIARSKKSGKVVATANGSYIMNTKQ >gi|312955012|gb|AENW01000046.1| GENE 199 208411 - 209061 329 216 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEEENPVETEDPSSDPDEVMVKNDEIAEKEPHEEEQVTANDIYTADAGVDKELLEEVRKE VQELLHGVKAPQRVEAEQQEYPDFNRKYDINKSRQTDEQEEMPEPEEIEKPKVEEAPIVE TQEEQGILLKDMEFDCSSRFAVLTGRVINKTPVPVRYIKAEIELYDDFRNVIKTMKWYLC GRDFLQPEETREFSYTAYEVYGVYDYKIRILNWKQK >gi|312955012|gb|AENW01000046.1| GENE 200 209314 - 210468 912 384 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401245|ref|ZP_06645389.1| ## NR: gi|293401245|ref|ZP_06645389.1| putative signal peptidase I [Erysipelotrichaceae bacterium 5_2_54FAA] # 24 150 27 153 289 99 34.0 3e-19 MKQKLSWILEGFFLILLLLVTILIYVPKQSEHLLHIRMIQVTGKNKEKAIEQDSLIFVKT FKDNEEPKNNTLISFRAERFGELVILTHMFVKSEVRNQETFYITQAPDSSYYDTYETRHE DLVGSYLFHMKYMGRVYEFLQSSYGKITYAVVLGVCILSTMLLLIKGVLRERKGKAGIEV SAKKNALDPDQRFVDEKKEDTRGQEVKPDAEKPLLKTPKEDISRQAKGTEDKTAKAKQQA ATDSILQEAGTASKQQIPKQTGKQRLRKRHALKTAPVEQRKAADDEELLPIVYKQKHQKP AGPTKIQQEIQEHPDAQGKHVQKSEITQESLVQHTSSGKSKPEQTIDLREGGATFTQAEL QDILIAINTNEEESDQDTATASPA >gi|312955012|gb|AENW01000046.1| GENE 201 210667 - 211155 290 162 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTEKQQVYHCRGIVKQLNAYIKADKLLILCESDVPAEIKKDITAQFPEAACYTVPGTAH IKTFDNLEAIVRFLYQSGCQKESSLLIIGNQQLKELGGFIASAYCCGIAYLYVPLTGNAA LHAASHFCGVDLMGIPDVLQSCHEPRMVFLDEDIFESEHNAA >gi|312955012|gb|AENW01000046.1| GENE 202 211162 - 212034 853 290 aa, chain - ## HITS:1 COG:BS_yitT KEGG:ns NR:ns ## COG: BS_yitT COG1284 # Protein_GI_number: 16078176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 8 281 10 279 280 133 31.0 4e-31 MKTAQDWLYCISGALLFSFSMNVFLVPLHIYSAGFLGIAQLLRDLLLHILPYRLSFDIAG IINLILNIFMIILAARVLAKTFAVHTAIVILFESLFLSLIPVPKASLVEDVFISVLLGSF LCAYGTRLFFKGRGSGGGIDIIGLYLTKTGKGSVGSIYLLVNTVIYLLCFLIYDSQVALY SIVHSCILSFVLDRIHEDNAESAALIITENHELKQQLILDVGRGVTVWDGTGGYSGRRKE VMMVAITRGQYGHLKKQVQGCDEQAFVIFFDHVRISGYFPKLINEKRKNR >gi|312955012|gb|AENW01000046.1| GENE 203 212031 - 213110 880 359 aa, chain - ## HITS:1 COG:alr2458 KEGG:ns NR:ns ## COG: alr2458 COG0787 # Protein_GI_number: 17229950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Nostoc sp. PCC 7120 # 2 356 47 397 401 171 33.0 3e-42 MQLKRHLTAGTRFMAVVKGNAYGHGIEPCVQAMDDLCDWYGTATMQEALRVRSVSGEKPI LVFGYVSDEEIHLAAENNITLSAFSATFLSHISECCAGMNLKAAVHLKLDTGFHRMGIDC CSSIADCVEQLLPLFSLPNIEITGMYTHLVYGAGSNQRELAFTELQFQRFQSCIRALQER KIDTGICHICNSKAAIHAPDMHMDMVRVGAYIFGLASASEQRLIPLREVLVWKARIVLLR DIAAGEGVGYGHAFIAKQPVRIAVLAAGFADGYRRCIAQSPQSYVSIHGRPAPLIGKVCM DMFMVDVTDIEAVQVGEYALLSGDDGTGAVSSYLLGQIIQGTAGEIAVGMSDRVQRYIV >gi|312955012|gb|AENW01000046.1| GENE 204 213179 - 214069 957 296 aa, chain - ## HITS:1 COG:lin1660 KEGG:ns NR:ns ## COG: lin1660 COG0115 # Protein_GI_number: 16800728 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Listeria innocua # 19 296 9 286 289 216 38.0 3e-56 MNGIEKKGIGERYLWKGAMVKEQDIHISLQDRGYVFGDGLYEVVRVYNGKLFGLKRHLDR LFQGADVIDFNLQYTREEFEGFFQQLVEENDLHSGYVYMQLTRGDDGIRNHLYPGREDQR PVLSGFAVHAPRNVEKIQAGTTAISVEDIRWKYCHVKTLNLIPNCMARSEAKRKGAGKAI LVKDGIVTEEKSGSILIVQNGCILTHVENEDILPSTTKKILEALCEKEQIPFREGNFTLD ELYAADEVIVADTNTECSAVLKVDGHTIRDGKPGPILKQLQKAYEAAIIAECGKAE >gi|312955012|gb|AENW01000046.1| GENE 205 214086 - 214511 608 141 aa, chain - ## HITS:1 COG:BMEI2032 KEGG:ns NR:ns ## COG: BMEI2032 COG2893 # Protein_GI_number: 17988315 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Brucella melitensis # 1 107 12 114 144 76 37.0 1e-14 MIGLVLATHGPLAEAFVSSGKLIVGNIGNVAHLGLFHGDSIEQFEQKVYKAIEQADEGDG VIVLTDLLGGSPCNVTAKAIGRLYKEKKLECFYGINLPIFLEAVTSRKFMNFDELKEHMD EVFKETYGMLSGKISYSACKE >gi|312955012|gb|AENW01000046.1| GENE 206 214527 - 215003 675 158 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 156 1 156 161 96 28.0 2e-20 MKNIVYARVDDRLVHGQVMTAWVLHTKASKVIIVDDKAAKDSFMKMIMKSAMPSSLELEV LSVSSAISYLKEAGSEDERIFLLAKTPMVFADLHDAGVPIQEVGIGGIGARADRRKLYRN IAVNEEEMNSIKAMQSKGMDVYIRVVPDDKRIEIKDAA >gi|312955012|gb|AENW01000046.1| GENE 207 215008 - 215502 782 164 aa, chain - ## HITS:1 COG:BH3723 KEGG:ns NR:ns ## COG: BH3723 COG0800 # Protein_GI_number: 15616285 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Bacillus halodurans # 9 161 58 210 214 109 37.0 3e-24 MDTIRAMLEEHFRGRMAIGAGTVVNPAQVELAYQAKAAYIISPNVNEAVIRKTKELGMLS IPGALSPSEVLDAHEYGADYVKLFPAARMTASYIKDLMGPISHVKFIATAGITEENIAEF AAVGCTGYGISGRLMDKRVIQEGRFEELQHRAEAFIACLQKEEE >gi|312955012|gb|AENW01000046.1| GENE 208 215526 - 216113 851 195 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 1 195 76 271 277 106 35.0 3e-23 MGLVCSLEEERANGLPIEGEDISAIKTGLMGPLAGVFDALRQGTAIPIVASIAIGMGMDG NFFGPIFYMIVTVLYVMVPCYWMFQTSYKKGKEAVNGLFASGKLERFMTLAMAVGAITLG GLEATTVTVTSSTVLHLGSSDMVLQETIFDAIFKGLLPVGFVFLSYFLLQKKLSTSKIIL ILIAIAIVGVLIGFF >gi|312955012|gb|AENW01000046.1| GENE 209 216129 - 216374 369 81 aa, chain - ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 78 1 77 286 60 37.0 9e-10 MERQITDTNVQTEKKLTKTDLNKCFLLWHLLGEATLSYERLQTPGVLGCLGPVLKRLYGD DKEEFVNACQRHMEFFNTAGY >gi|312955012|gb|AENW01000046.1| GENE 210 216378 - 217145 1069 255 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 5 251 4 247 249 106 30.0 5e-23 MEINFLQAALIGILYYMTLCSPPWLTGIVHVSIRQPLVSGTIVGLILGDPQNGLIIGATI NTVVLGFLNVGGAIPSDPGIAGVVGTSLAIATGATPEVAVTIAVSFGLVGTIVWNLRSTI NSVFVHMVDSAAAQGDMKKIYFVQFVLAQIATFCISAVPVFGILYFGTDVATQVLDALKG TPMQILTVIGQILPAMGIAIILRLLSNRPNIIQLFMLGFVLSIYGNVPMIVIAVVAFIIA SLYADLKFNRAKEEV >gi|312955012|gb|AENW01000046.1| GENE 211 217543 - 219792 1945 749 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0952 NR:ns ## KEGG: Sterm_0952 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 6 726 4 726 780 161 24.0 7e-38 MKKAPRMKDIQNLIASYTANGITAHTYDFSSCNAHDIALILKIDRTNVSRVLNQLHRENR LIKLQGRPTLYLDAGVIHSFSTEPVPYTLPVGRDIQEYLHQDKPVRVREHSSRQTLTYTG IHANESLHSLYQELLAILMYPQALQSLALCAPYGEGKHHFLKFFIEKAKELQLLGRHTQI LEHVLSDAADEQNQIYNMHPETPAFLILDVQCSDMHIVQQVAEKLQKQHAALHSSWKVCY LFHDANADIAQLQRFIDYPMVFPSYEMRTLKERLEIIFAEIQRQSDILNQTICLHKNVIT CMALADKAYTTHISLQELRRSIIRAHYSFIQRKANVIDITFEHLSDGMLNSIRDVSSRFA QLHSILDLFDGDVLYFIPQTSCRFFTALHHAVLNEQHLIDSNDDEQIVSICNSMLKKTEK IEINTIRSIFVKELYDLMFPLLASTPLKQKETMIFVLFEYLQNLITELKNNTYTRSFTPS HGLGTKRTDAVTEDIAQIIQSKMEVVLPQDERILISTYLQLAIQKLEAKTPILFVCHGED IAANYEKYIRSANLYENCHSLDYSEAWRRKEFHLFLDHVCDRIQQIDNHETLLLFSDIAP LTEIGEQISSRLHIDVQSYAPISLPLILNTISAMKHGHAQEYYSQPQTPSFPASSLSENS RTLIDRISRQILQQSLVFLDANKASSSLMVVLLNILKKLKLGYSDEITIRFIIHGAFVIE RAIRSDPLPNKKNTGDYQFPCRCVQYDQS >gi|312955012|gb|AENW01000046.1| GENE 212 219996 - 221456 1718 486 aa, chain - ## HITS:1 COG:CAC0990 KEGG:ns NR:ns ## COG: CAC0990 COG0008 # Protein_GI_number: 15894277 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 3 482 5 484 485 585 57.0 1e-167 MKKVRTRFAPSPTGYMHIGNLRTALFEYLIAKHEDGDFILRIEDTDQERYVEGAVEIIYD TMKEVGLHHDEGPDIGGDFGPYVQSERLPMYKEYADQLVDLGGAHYCFCGEEEIEKQRKE AESLGISFKYDDPCKHVSVEEARERIAKGEKYVVRQTIRHDGETYFDDEVYGRIEVDNSI LDESVLLKSDGYPTYNFANIVDDHQMGITHVVRGNEYLSSTPKYNLIYQSFGWDIPTYVH VPPVMKDEQHKLSKRNGDASFQDLVKKGYLPEAILNYIALLGWSPETEQEIYTLDELIKV FDIKRISKSPAIFDIDKLTWMNGMYLRAMSTETFCELAKPYIEESVHRPVDIMAVARILQ PRCDILTSIPESLDFIDELPEYDNAMYIHKKMKTTYEIAYKALQAAQSALSELNDWSSEE NLHELLLSLPKQMEMKNGQILWPVRTAITGKQFTPGGAIEIAHILGKEETLKRIAKGIEK LEAELA Prediction of potential genes in microbial genomes Time: Sat May 14 02:52:17 2011 Seq name: gi|312954995|gb|AENW01000047.1| Clostridium sp. HGF2 contig00015, whole genome shotgun sequence Length of sequence - 15650 bp Number of predicted genes - 15, with homology - 8 Number of transcription units - 9, operones - 3 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 44 - 103 4.8 1 1 Op 1 . + CDS 238 - 552 108 ## 2 1 Op 2 . + CDS 565 - 1113 251 ## BLA_0862 1,4-beta-N-acetylmuramidase (EC:3.2.1.17) + Term 1260 - 1303 -1.0 3 2 Tu 1 . - CDS 2077 - 2268 111 ## gi|223986972|ref|ZP_03636934.1| hypothetical protein HOLDEFILI_04260 - Prom 2298 - 2357 2.4 - Term 2294 - 2324 -0.9 4 3 Tu 1 . - CDS 2467 - 2796 226 ## COG3666 Transposase and inactivated derivatives - Prom 2816 - 2875 3.0 + Prom 2827 - 2886 4.5 5 4 Tu 1 . + CDS 3080 - 3280 143 ## 6 5 Tu 1 . + CDS 3926 - 5437 1202 ## COG1316 Transcriptional regulator + Term 5452 - 5503 -0.3 7 6 Op 1 . + CDS 6261 - 7709 199 ## COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 8 6 Op 2 . + CDS 7780 - 8304 121 ## 9 6 Op 3 . + CDS 8316 - 8639 224 ## + Term 8845 - 8891 7.2 + Prom 9051 - 9110 8.7 10 7 Tu 1 . + CDS 9208 - 9642 324 ## + Term 9652 - 9696 2.6 + Prom 9705 - 9764 4.1 11 8 Tu 1 . + CDS 9790 - 10335 231 ## gi|160915561|ref|ZP_02077772.1| hypothetical protein EUBDOL_01569 + Term 10353 - 10391 2.3 + Prom 10452 - 10511 6.8 12 9 Op 1 . + CDS 10534 - 12186 1472 ## Ccel_1294 hypothetical protein 13 9 Op 2 . + CDS 12223 - 13047 393 ## 14 9 Op 3 . + CDS 13044 - 14171 703 ## Swol_0163 hypothetical protein 15 9 Op 4 . + CDS 14168 - 14623 402 ## + Term 14717 - 14775 1.3 Predicted protein(s) >gi|312954995|gb|AENW01000047.1| GENE 1 238 - 552 108 104 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGVAGNYVYQKGGLAAVNNLNAVPAGKNKVKISWDKVEDAEGYIVYRRIGNGNFEYRYMI KGTEYTDTTASNNEYNFYRVYPYITEKGNRILGPSNMYKYAKGN >gi|312954995|gb|AENW01000047.1| GENE 2 565 - 1113 251 182 aa, chain + ## HITS:1 COG:no KEGG:BLA_0862 NR:ns ## KEGG: BLA_0862 # Name: lytC # Def: 1,4-beta-N-acetylmuramidase (EC:3.2.1.17) # Organism: B.animalis_lactis # Pathway: not_defined # 79 182 117 225 542 101 46.0 1e-20 MKERSRVKKTLKFILCIALLLLQNDFNVLAEVNETETEIVDENSYQKINLNEIDKMKNAA MGQNQEMTSRDFRDVGPYWVNENGIKSFYDANNVLFERKGTKKIIDVSEHNGKIDWKKVK SSDVDGVIIRVGYGYLMEDKYFQYNVSECNRLGIPYGIYLYSYAYDANFAYEEANGTDEM LK >gi|312954995|gb|AENW01000047.1| GENE 3 2077 - 2268 111 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223986972|ref|ZP_03636934.1| ## NR: gi|223986972|ref|ZP_03636934.1| hypothetical protein HOLDEFILI_04260 [Holdemania filiformis DSM 12042] # 3 62 268 327 346 71 56.0 2e-11 MYPKTNQKYVNEHCGDCPLRSRCTKARKGRTLNRSRDMEKYHKEVRKNLESEEGKKIMMQ RSI >gi|312954995|gb|AENW01000047.1| GENE 4 2467 - 2796 226 109 aa, chain - ## HITS:1 COG:CAC0657 KEGG:ns NR:ns ## COG: CAC0657 COG3666 # Protein_GI_number: 15893945 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 16 105 222 310 334 88 50.0 3e-18 MDVCDWIERCMNGHGIEFKHGKGKRKHKVQRYYDELKEYGLKMYKYTLHIDILAERNSFS KTNPDATFMHMKYDYYNNTGVFKPGYNVQMGVSSEYIRHIYISADAGYG >gi|312954995|gb|AENW01000047.1| GENE 5 3080 - 3280 143 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDEAVESLMARSVIIHKRYETDISTAQFLKFSSGSVTEQAHARITVIHIDAIIAMSISVS EINMLI >gi|312954995|gb|AENW01000047.1| GENE 6 3926 - 5437 1202 503 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 116 485 114 480 481 236 39.0 1e-61 MAKRIHKTKKTPLFKNVGFYFVLLYALLTLGMIVQVFTVNVIPMKYAMIVCVILLLLLLG MYYLQFGKKVNKVNKVLGKILIVILAVFLGVGNWYLFKTGSAFSRITGDDTQTSIVSVVV MKENKAESIEDLKNSKFGLTKTGTQDIMEKGLADIKKDAGQDITTVDYKSYKTIADDLYD GKIDAIIMDEATRSLFEDNHSKFDSETRIVKSYKYKTTTKDISKNVNVTSEPFNIYITGI DTYGTISTVSRSDVNMIATVNPKTHQILLTSIPRDYYVPQPCQGGQTDKLTHTGIFGVDC TVETVENYFGIDINYYVRVNFSSVENIVNALGGITVNNPVAFTASDGTYSYEAGDVYMDG AKALRFARERYNLGGGDRDRGKNQMRVITGIINKAISPSIITNYTSILDAVSGSFQTNMS NSEMTSLIKMQINDMSGWDIEQISVNGTGNGSAWSPANGFNSWVMEPNVNTVKRAVEVIK KVENGEDVKALAQQVMEENTADE >gi|312954995|gb|AENW01000047.1| GENE 7 6261 - 7709 199 482 aa, chain + ## HITS:1 COG:CAC2722 KEGG:ns NR:ns ## COG: CAC2722 COG5184 # Protein_GI_number: 15895979 # Func_class: D Cell cycle control, cell division, chromosome partitioning; Z Cytoskeleton # Function: Alpha-tubulin suppressor and related RCC1 domain-containing proteins # Organism: Clostridium acetobutylicum # 231 456 75 338 370 78 28.0 4e-14 MNEDLRERAYKQPDKFLRMDEQQTLDNILENYAIKMEDTYGLDKSKLLSCLDKASLKIKH EELITDKIKKFLEDEKLTLSVDLSFEENIRQYCEKITGALITTEMVTQLGNLKEREVEYR QRCESQMRVNQQRRKKLAIMVGSGALILIALLINTVMQQTSHDNENISDTASAKIEQKTE KETVKTENHNLPQIEAGVYSTIALKKDGTVLSTTIHKSEDNRGQNNVKNWENIIQVSSNE YHTVGLKDDGSVISTSINTSNDTGQAEVDRWTDIVQVSAGTWHTVGLRKDGTVISTFIDD MYDFGQGDVDDWTDIIQVCAAWDHTIGLKTDGTVVSTKINNEKYDFGETDVTDWNGIVQI ASGSNHTLGLRNDGTVVSIGYEKDGRCSVSGWRDIIAISAGRFHSIGLRKDGTVISTEIL DKKENFGQTEVAEWSNVVQISAGWLHTVALTQDGHILYTEISKKADDNGQTEVAEWDLNG GN >gi|312954995|gb|AENW01000047.1| GENE 8 7780 - 8304 121 174 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDDAIIQIKNVASVSLRYPPKYGYSPYAIGIFIISFYIFFYTVTAAEIKFISFMFLISAA ISGYMLYRTWEKNKDLGKNIIISTGSGFSFWINSKDDDFSLKVIDVIRNIMNGHAIENEV IINLEKLDIINNGIMAYTDHSQHNTSYSDISDSIIGSDNKVQAPDADEYPELKI >gi|312954995|gb|AENW01000047.1| GENE 9 8316 - 8639 224 107 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGNYKNYSNISNSIIGDNNQVNIQTNEVSTETWNLLKKELLESISKTEDSQNREILEHIY AYAIQKDKTGIVQYIKKHSYTIEKDILVGITCSALYEFIKWCLGIYM >gi|312954995|gb|AENW01000047.1| GENE 10 9208 - 9642 324 144 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAITKNQSGTYAAVDIHYNRPACAPHQNVINYLDHLHIMVIHKSLTAYLGCGYSRVLVGP LGNDEMSDFLSVTPQNKYEIAYTMYLKKTNTTADANSVMLDDMYCIGTYQGSEKMSNYLV FCDEWPQDADVRETLLSFKIPEGM >gi|312954995|gb|AENW01000047.1| GENE 11 9790 - 10335 231 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915561|ref|ZP_02077772.1| ## NR: gi|160915561|ref|ZP_02077772.1| hypothetical protein EUBDOL_01569 [Eubacterium dolichum DSM 3991] # 1 181 1 181 285 240 68.0 2e-62 MQAHQKSIKDGIQNILFPVEHMNITQGNNGSYSHQGVNALDLAGYKGGCSPLYAPFDVVC VGVDGPDLGNAVFWQSQNKVRFADGTIDYATIMIIHDNNLDGIRAGVKYSQGTQIANAGT AGRATGNHNHFEIAKGKFTHKYDLNQKTKVYHLPNSISADKCCFVDKTDIINGNNMKWKH L >gi|312954995|gb|AENW01000047.1| GENE 12 10534 - 12186 1472 550 aa, chain + ## HITS:1 COG:no KEGG:Ccel_1294 NR:ns ## KEGG: Ccel_1294 # Name: not_defined # Def: hypothetical protein # Organism: C.cellulolyticum # Pathway: not_defined # 26 549 21 583 594 143 25.0 2e-32 MANDLILKVEKDHTISMDCGGIRETYSLKEAPDASSTLVVTEKKNILHKMDLDTVLKNLD NSVDLLNVAYHAVYGFDVQTQIWDLQKTLMDLNDKGINVIDDFARQSSAVIHDLIGFFDW LTKGAEKVAIKKLERFSVIAGTMSRQAEQLAKDYQKMAGDTSETLKNTIDENNRQYAHQD QIQKEMADFQSEQEAADIAQQEIKKRLTRLQTEYEKLSKAELDAEKHQRTMDIMGAVFSF LGSAASVAADVAGKSGSTESSTEDKEKLDTAQKEANAAKDRLESLKKEKEELVKALETAD NDEKRESIRSDIRAKDIEITEAEKQVNKKSSALKSISAALHGVSSQIAEQSQKESSVQEN RSKRLTEINAELIRLEEEQTKQLANLAKYTNRLKTMVIEKNSVEAAVRSLIVAVSCLKNV VVAVMDIALFWTSMEKCCKALATSDLKDTIQDLQEIDKEERIEFYYTDSVMIPLLTYMVQ WAAVKSISTDFINGAENTRFRLNETITKADKAEMSREQHWDLASKTAGNVANNLNRQVAE SNKKISTLKG >gi|312954995|gb|AENW01000047.1| GENE 13 12223 - 13047 393 274 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKTDSANLQLTKIMEQILQMLQKNSIHMDLSDEDIARLERQEQSILDSLEQIRIQADEN RNRVHRIFDEKKVLCDQLNANLSALYVHMEILKQINHEQESIYEGRKNLYDAYNASYISK QEAYSKAQEKLESARRKAEKQNELLKRWFWVPGYGAYLAFDKLLNDQEADTDAAYREYCA SKERLAAISRDLESAKYDYQCSQTEKNNVQKSYDDKVDEIKKVQGQLHQMKEEMVHWELI LSEVNALYNKIKNASLGPDEIIAMQAELIQLQQL >gi|312954995|gb|AENW01000047.1| GENE 14 13044 - 14171 703 375 aa, chain + ## HITS:1 COG:no KEGG:Swol_0163 NR:ns ## KEGG: Swol_0163 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 40 369 307 635 1056 100 25.0 1e-19 MKKFILFILIISCFGCESASQKTSCDYELVFDQALGYGINEHDGTPAAISTHVAKRDSIL LAKSKDSCFDQSLQKAARATLDNSDTKLDYHPEETNKDEILFYIPHTDIQQGDMQFEVQI GDTRKKESVNTTVIPVKKFLIVPLLTSKKNKELSVTNTQMQAWHNEILKRLPLSRNGLQL ILHDSLDIRGDVYDLDTWFGRLRTWNLLKHLKNEFECDGVIGLSPAKMDLNDQKDALSGF TFGADTTVILENGDETAITMVHEISHFYQVGDEYAGGQLNPEVNIPPYGMKGTDMLHPGT AASGLNPYIHGGKNDEKQGSGTLITSSQIPYDSVEHKLIRHDMTSYMGKDGYAMQEYWTT GMIWKHLIQEWRITE >gi|312954995|gb|AENW01000047.1| GENE 15 14168 - 14623 402 151 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTEKSKRLKQLLKVIEDNEKNLTDTERMNYQNLKILHIGMQSKLYKIMLTWDFGWNALQK NQYTDLQESLDDDADFYKQALKSWMSLKPVPKIPQIEEFVDIYEQWLIEMLHHDIQDAFH NMINDPDKESLRRLITDYRDKLQHIYIDEES Prediction of potential genes in microbial genomes Time: Sat May 14 02:53:32 2011 Seq name: gi|312954993|gb|AENW01000048.1| Clostridium sp. HGF2 contig00066, whole genome shotgun sequence Length of sequence - 869 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 731 253 ## Cphy_1803 transposase - Prom 751 - 810 6.8 Predicted protein(s) >gi|312954993|gb|AENW01000048.1| GENE 1 2 - 731 253 243 aa, chain - ## HITS:1 COG:no KEGG:Cphy_1803 NR:ns ## KEGG: Cphy_1803 # Name: not_defined # Def: transposase # Organism: C.phytofermentans # Pathway: not_defined # 7 243 10 257 434 149 34.0 7e-35 MATNKNKHLTQDDRNVIAIGIVNGSSKKAIADNLGKDKSTIGKEIRAHRYLSHKSTLSLE CENYAHCKFKRKNCTVNCPDYSKFRCKRRDRTPGACNGCEKLKSCRFDKYLYKPTIAYEE YRSELVESRTGINLTSSEAVELGNTIKPLLLKGHSPYQIIAAHPELGISEKTLYNYIEQG VFECVGIANIDLRIKVKRKMTAKKKTIYKKRQDRKFLVGRLYTDYQSYVESEEITHILQM DTV Prediction of potential genes in microbial genomes Time: Sat May 14 02:53:42 2011 Seq name: gi|312954969|gb|AENW01000049.1| Clostridium sp. HGF2 contig00044, whole genome shotgun sequence Length of sequence - 25290 bp Number of predicted genes - 24, with homology - 17 Number of transcription units - 10, operones - 5 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 320 - 374 5.5 1 1 Op 1 . - CDS 413 - 1696 1017 ## Tmath_0743 hypothetical protein 2 1 Op 2 . - CDS 1693 - 5727 3512 ## Teth39_1565 chromosome segregation ATPase-like protein 3 1 Op 3 . - CDS 5724 - 6833 1239 ## Teth39_1566 hypothetical protein 4 1 Op 4 . - CDS 6851 - 8332 1491 ## Tmath_0740 hypothetical protein 5 1 Op 5 . - CDS 8388 - 8855 307 ## 6 1 Op 6 . - CDS 8868 - 9203 478 ## Btus_0535 hypothetical protein - Prom 9225 - 9284 7.0 + Prom 9189 - 9248 6.9 7 2 Tu 1 . + CDS 9400 - 10359 616 ## COG2378 Predicted transcriptional regulator - Term 10626 - 10677 8.6 8 3 Op 1 . - CDS 10718 - 10978 58 ## 9 3 Op 2 . - CDS 10991 - 11122 89 ## 10 3 Op 3 . - CDS 11103 - 12011 660 ## - Prom 12078 - 12137 5.2 11 4 Tu 1 . - CDS 12149 - 13156 253 ## PROTEIN SUPPORTED gi|222094442|ref|YP_002528501.1| putative ribosomal protein L5-like protein - Prom 13205 - 13264 6.9 + Prom 13200 - 13259 9.5 12 5 Op 1 . + CDS 13436 - 13570 72 ## 13 5 Op 2 . + CDS 13714 - 13887 93 ## gi|225386914|ref|ZP_03756678.1| hypothetical protein CLOSTASPAR_00662 + Term 13894 - 13942 9.1 + Prom 13999 - 14058 4.0 14 6 Op 1 . + CDS 14094 - 14435 84 ## + Prom 14442 - 14501 6.3 15 6 Op 2 . + CDS 14521 - 14835 216 ## gi|160915805|ref|ZP_02078013.1| hypothetical protein EUBDOL_01820 - Term 14874 - 14929 10.1 16 7 Op 1 35/0.000 - CDS 14952 - 16841 173 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 17 7 Op 2 4/0.000 - CDS 16831 - 18567 230 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 18 7 Op 3 1/0.000 - CDS 18620 - 19048 582 ## COG1846 Transcriptional regulators - Prom 19086 - 19145 8.6 19 7 Op 4 . - CDS 19262 - 20332 1153 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 20 7 Op 5 . - CDS 20366 - 21304 1039 ## Bcer98_1704 YVTN beta-propeller repeat-containing protein 21 7 Op 6 . - CDS 21392 - 22498 1157 ## CFF8240_1775 patatin - Prom 22594 - 22653 2.9 - Term 22552 - 22601 -0.8 22 8 Tu 1 . - CDS 22716 - 22970 239 ## - Prom 23032 - 23091 7.8 - Term 23107 - 23163 13.1 23 9 Tu 1 . - CDS 23235 - 24209 1154 ## COG0280 Phosphotransacetylase - Prom 24233 - 24292 8.7 + Prom 24641 - 24700 2.3 24 10 Tu 1 . + CDS 24725 - 25273 622 ## NT01CX_2426 hypothetical protein Predicted protein(s) >gi|312954969|gb|AENW01000049.1| GENE 1 413 - 1696 1017 427 aa, chain - ## HITS:1 COG:no KEGG:Tmath_0743 NR:ns ## KEGG: Tmath_0743 # Name: not_defined # Def: hypothetical protein # Organism: T.mathranii # Pathway: not_defined # 8 414 7 411 440 209 32.0 1e-52 MIEDAFAQYLLQDTGFRRVTDLWIRQYQKLQHFGGTICIKDPEDDEREAIGGLLGKDYWG VRDISIPYSVWEKAIEDSRFAGSDFLRVLEIYKGESILTNKEQKEIKAQKEQQDMQSLSK RYACTKAGEWLNWMQETNHKSYGNIRQLLNNNKWQTVCFILDAINQLPVWKQEIETMAVF ASAVTQDPHFFDKGIENTLLFQGICYFLNVEEQDISLAEKNKLYYEAGLLKDDLSNSCMI AHLNAEGRDGKVHEAWKGFFDRYEAWTVSLYNLQQIHNISDAIKAVYIVENPSVFRSLFL EGKRLGKEQIGFVCTNGQLNLCGYVLLDLIQKSNIPMYYAGDFDPEGILIADRLKQRYKD DLHLWKSTVEDYHRIMSTSSIREKRLLSLQNCRSEELQALCRELEKHACSGYQEALLSLY IEEIKNS >gi|312954969|gb|AENW01000049.1| GENE 2 1693 - 5727 3512 1344 aa, chain - ## HITS:1 COG:no KEGG:Teth39_1565 NR:ns ## KEGG: Teth39_1565 # Name: not_defined # Def: chromosome segregation ATPase-like protein # Organism: T.pseudethanolicus # Pathway: not_defined # 1 1339 1 1370 1388 639 32.0 0 MSELISKWHMHRLGLVDFWYYVNEEFSFKDGHMLLRGSNGSGKSVTMQSFIPLLLDGNKS SERLDPFGTRSRKIENYLLEEGGERTDRIGYLYLEFKRSDSEVYKTIGMGMHAKQGRPLV SWYFVIEDNLRINREVQLLDHNLAITKQVLKNRIGDTQVMDSQKEYMDRVNQALFGFETS EEYKEAITLLLQLRSPKLSNSLKPTMINEILSESLQPLSEDDLRPMSEAISNMDNIKDQL DALKQSYASAKAVYQVFEQYSHAVLFEKYHIYQTVRQTAANLHEAYQKYEEELQRHQQET KQKQENRTQLAQEQALLTEEKLSLATDDLQRLVEDCTRLAAEKEDTIQKLQHKETQEEEK SDRLQELRVQHKTQSDRCEQALSEMKEAFDQLDVLQEELLLEDHLLLKEEMFQHPDTPYD FTYIGKRLDAKLRLLEEGLQLFNSYDVAKSHHKQLVEELEQQKQTNEQQEHLVAQLDEQC DRIVEEYKERISQWSANNQHLKLTDEEFHKMMHLLMQYEEQPDFYKLTDIIQQSYQTLYK EIIHLQIEQKEMAETCRMNLEQKSAELHMWQTQKDPSPAIAGEQEQARQLLKQHQIESRS FYTLLEFDEQMDEELRALCEEALLRLGVLDAQVVHASSRSLIETLASGSGDMYFFTQRNV RDLQPYYLKGTTPEQLAGEINTVLTSLHITYDGKLQLHDAMFQTGIVEGKLYQSVSARYI GENARQKYREQMILQLQKACDMLKKEYDQEMQKLTDLDKRLEQLEQEASAFVKEDDLHLA LQQLNEGRRILQHDIACYHQMEERLRRHLEAMQGIEKQLRETAGKLSITLRRNVFEQQKD GYNSYRKLLQLVQTKQPIFIQSLDFVKSCETQIEDAFRDVSEFKAEIDTLRELIKKQNLL LQQKEKQLKDLGYEDKQKRLQQIEERLHKLPDLMQELDTRLGQLQSLVAATSQDLERTKQ DIEHQDALVSTYFDVVKNEAALGYTNIPLCEDGQLIKEIRNLEKQTEVLKKPEALKMDLQ TAYYNHRSNLQEYNLTFTTDDTWEELTDISARLDINARYQGTSLSFPELLDCLQRDVDLQ NNLLVDSDRHLFEDILVNIISKKVRIRIQNSRAWVDTMNRYMNAMNTSSGLHLNLQWKSK KAESEEEMDTRQLVEILQKDVKVVKESDLKRLSSHFRSKIAAARNLQNIENNTLSFHQLM RQVMDYRTWFEFKIMAQKTGEAKKELTNNTFYAFSGGEKAMAMYVPLFSAVAAKFESARE DAPLLIALDEAFAGVDEKNIYNMFDLISKFKFDYIMNSQVLWGDYASVKGLAIYELFRPE NARFVTVIPYEWDGHIKRMKGDLS >gi|312954969|gb|AENW01000049.1| GENE 3 5724 - 6833 1239 369 aa, chain - ## HITS:1 COG:no KEGG:Teth39_1566 NR:ns ## KEGG: Teth39_1566 # Name: not_defined # Def: hypothetical protein # Organism: T.pseudethanolicus # Pathway: not_defined # 5 364 12 371 383 200 34.0 7e-50 MNRRWILKSQDPQLYYEIKDNAKELKKKLQEKFGYALIINPYLVKLEKIPGKAEGWMGIT EFETLMEYQMFCYLLMLLEDKEAGERFILSNICEFIQVQLPKGELEWTSLRARRQLVRVL QYALKMGMIISREGDEDYFLKDETSDILYENTGVSRYFIRNIPKDIMDFHEPEDFLQSEW FDMEEDRGIVRRQRIYRRLMLSCGVYHTAEEDKDDDFGYIRNYRRNIENDFQSLFPCQLH VHSSSAFLVLEEDCSMGKVFPKTHAYYDLLLIVHDDLRKRVKSSRLSLDQHEGITLRLEE YLAIVQRLIKKNNALLPKKYQIENRRVEDSAMDVCNLAQTLGFAQVQQENVYIYPVAGKI TGTYAEVTE >gi|312954969|gb|AENW01000049.1| GENE 4 6851 - 8332 1491 493 aa, chain - ## HITS:1 COG:no KEGG:Tmath_0740 NR:ns ## KEGG: Tmath_0740 # Name: not_defined # Def: hypothetical protein # Organism: T.mathranii # Pathway: not_defined # 7 488 9 493 495 374 41.0 1e-102 MELYDKLLKPITEVNYLRAENVDRYRIIIRYFYQEHEKIHYWMFKEDIYDMISALPGYED YTMENCQNDLQALCDWGNLVATQDTSVPNTLQEFKNKKFRYQLSEYTVVIERMTIDLEHL AVEGASLEPTLLERIRKQILQLLAVRDKSNMEVADWWRSLNDDFIRLNQNYQDYIKTLNS AKAEQMMKSREFLVFKDKLITYLQTFVKSLQEHGMIIEDYLSGVKDEDMALIFDKVAEYE LSIPRINSHITKTAVLENCQGRWQSLFNWFVGENDNNEVNRLFEITNEIIRKITRYALQI GELHNQGANRKEEYRRIAEIFAKCNTMDEAHRLSALVFGADTCMHLKNIASRDTDSIHSG VYQEASAFLALEPRTKVARKKHERKPATDYALDRRIQRLEYEAQREAEQKKIKELSKNGE IIFSQLPLLDKATRKALLGWVSKALAASDRRAKTDQGQHYHIEKEREGDCILHCEDGNLV MPCFKILFDEEQL >gi|312954969|gb|AENW01000049.1| GENE 5 8388 - 8855 307 155 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQFNQGNHNHNENTEYHYYGDYVQREETHVHMHGEAMDKAGSVIYDISALHGIRKLLFVI VFAAANCIRLCSFGFFAILHLAAVIIQKFVALYLVLMGIMLISGLMGDAIPWTSVIVLTI TLGILYLLCNDTEAWYGYFVQLINRTLDALYRRLV >gi|312954969|gb|AENW01000049.1| GENE 6 8868 - 9203 478 111 aa, chain - ## HITS:1 COG:no KEGG:Btus_0535 NR:ns ## KEGG: Btus_0535 # Name: not_defined # Def: hypothetical protein # Organism: B.tusciae # Pathway: not_defined # 3 101 6 103 128 88 46.0 8e-17 MTYITIVGLRYYFGNEVFRVGQRLLIEKDIDNEEDDEAIRVISDAGVTFGYVANSVRTVA RGCKSAGRIYDWFEKQTEIRIMFILSDVVIASVELPAVMSIMNKDTEDLSF >gi|312954969|gb|AENW01000049.1| GENE 7 9400 - 10359 616 319 aa, chain + ## HITS:1 COG:lin0464 KEGG:ns NR:ns ## COG: lin0464 COG2378 # Protein_GI_number: 16799540 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 95 315 95 309 310 60 24.0 6e-09 MSAIAILYILKEYSDEAHPLSSNACIPLLEQVYDIKINRGTLSAYIKQLRNFGIDIQTTN RGYYLIDRDLEKSEVHVLCNLIHSSHFICDSSSFQLIDKLLKTQSRYHRKDFKNAVYIQN SRKTKNRQLFLNVDILLEAIQENKMIQMYYLTYNLKKELIRKREKPYFLHPYYIVEENGN LYLICKTDKHDDFTHYRIDRMQDIRKLDTSADALRNSFDPYAYSKTKMYMYSGEPVAVFL RCHKMILNDVIDQFGQEIILQETKGSDYFIARIYSTETGIMYYAMQYALYCEILEPSELR ERVRNNLRKALSVYEKDKA >gi|312954969|gb|AENW01000049.1| GENE 8 10718 - 10978 58 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPYLEKVCGANLSKLSYFMKQYFAYAARKGYKLSLTKSYQSKTKKLLRFSKSGNASIERR YSTRIIASYKKKPPLDKINDKEALKE >gi|312954969|gb|AENW01000049.1| GENE 9 10991 - 11122 89 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNRQQIEKKTAAVIERQLYQRGYATVEDSLILMGWLEEKYLTH >gi|312954969|gb|AENW01000049.1| GENE 10 11103 - 12011 660 302 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYLHKKDAKKLIKLREEYLKFVYKNHVYSVLLMQEPNKHQKMNQALAYIGSHPQCLKEF FDSRKWNESDSSILRGWKEEHYGEYRIIDVTPDYIELYDEDKDNLYRMKAIGMYLLDDVR NVLPEHRWKGSFFQYRNEFILDSVAEILIKQNATLEEAEDFYESIVRHRNVKGAYINDQD ITYNPLPERIEHDNFSELMHDFIAPMGNANNLSFQEFVALIKLASLGWNMAQIGKDALQT ELARLELDALDIVEFFRHRKNKYFKENKTLIQSAEAHDGKEGFELRLVVGNMEDLTIEQT AD >gi|312954969|gb|AENW01000049.1| GENE 11 12149 - 13156 253 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|222094442|ref|YP_002528501.1| putative ribosomal protein L5-like protein [Bacillus cereus Q1] # 1 304 3 287 373 102 30 3e-21 EKMRKLLAFATFALLLVLPTSTSIQAHPGRTDSNGCHTCRTNCEKWGLAYGEYHCHNGGG TSSSGGTSAPSTSGSSTPSPSTPQPVQEAKPKVKVPAQPKIDYAKEGAADGYSFKMKNPD KTLEDVTYTYSQKAYKTAFNKSFEKAETELMNNSSSLAETNGKKDALEKEAYQLKKLPSK IIKNEYIEYYKTAYDDAEQKVKTVLQDTAEYNAYEYVYNDKKISDVEDYNLKKFKAIYKE AYDTSVKSYEKEKKQLLQLAKDNGKKDGEEGEDQNLDFLDAVKDTAFYPAAKEAYEEAYE ENKKEGSLLIGMAATAVLILGLYLFIKKLRNRKKA >gi|312954969|gb|AENW01000049.1| GENE 12 13436 - 13570 72 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDIGYAALTKNIIMAFTKRAMAVMLENSIDRMKISTQDVDLVL >gi|312954969|gb|AENW01000049.1| GENE 13 13714 - 13887 93 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225386914|ref|ZP_03756678.1| ## NR: gi|225386914|ref|ZP_03756678.1| hypothetical protein CLOSTASPAR_00662 [Clostridium asparagiforme DSM 15981] # 1 54 460 515 517 65 62.0 9e-10 MPCEEAIEKAKAADLAVTAGAIRETVQIIDMEDEALAYYPGNTSRLKIRVAGGLRSE >gi|312954969|gb|AENW01000049.1| GENE 14 14094 - 14435 84 113 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKENYFEEYNRIASKIKVLRTAKHLTQEQLSELSGLSISYISKIEAPNCNKSFSLDALFI LAEVLTSRKLPESSKFTFQSLSYQIKVILLYDCGYDFYFFHTTSPVCIISNQV >gi|312954969|gb|AENW01000049.1| GENE 15 14521 - 14835 216 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915805|ref|ZP_02078013.1| ## NR: gi|160915805|ref|ZP_02078013.1| hypothetical protein EUBDOL_01820 [Eubacterium dolichum DSM 3991] # 1 102 1 102 104 125 58.0 8e-28 MTIQTINDYKNKFIISNYSFFTDIFTKPIWGDMGEDTASITLTVMENTWHLHFIRTQSGE PYPLSDTVCNVIDEYEKDLTNEEVFEFLAHHNILKEFEDAVSKL >gi|312954969|gb|AENW01000049.1| GENE 16 14952 - 16841 173 629 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 408 611 40 249 329 71 28 6e-12 MQIKKNKVKADRDSLQVLTRLCAYVIRNYRVSCFFVLIFIIISSLATVASSLFLKSLIDD YIAPILASNGPADFGPLFQALCAMAAIYVCGIASTYLYARILINVAQGTMKRIRDDLFAH MEKLPIRYFDTHHHGDIMSVYTNDTDTLRQVISQSIPQLLSSAITVVSVFLSMCVLSLYL TVIVVVMVIVMKTAMSKIAGQSAVYFKRQQSDLGVVNGYIEEMMSGQKVIKVFTHEQETK DGFDQVNEQLFDSAYQANKFANILMPVMGNLGNISYVLTALLGGLIAINGIGGLTLGALA SFLQLNRSFTMPITQISQQLNSVIMASAGASRIFALMDEGLEADDGLVTLAHVQEVDGEL IESEVPTGKWAWRHPRGDGAVQYVPLVGNIIFDDVDFGYHENKQILYNIKLYAERGQKVA FVGATGAGKTTITNLINRFYDIQKGTITYDGIDIKLIKKDDLRRSLGIVLQDTHLFTGTI RDNIRYGKADATDAEVIAAAKLANAHGFIRHLEHGYDTVISGDGASLSQGQRQLLSIARA ALANSPVLILDEATSSIDSRTEKIVQDGMDKLMEGRTVFVIAHRLSTIRNSDVIMVMDQG KIIERGNHEKLMKERGTYYQLYTGGLELD >gi|312954969|gb|AENW01000049.1| GENE 17 16831 - 18567 230 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 334 558 132 354 398 93 31 1e-18 MIKRILQEVKEYRKASFLAPIFMVGEVVLEISLPFLMSFIIDKGVSQGDMTEVTKYGLIM IVAAFGSLFCGAMSGKYAAYASAGFAKNLRRAMFYNIQDFSFHNIDKFSTAGLVTRLMTD VTNIQNAYQMVLRMCVRAPLTLVCAMAMTFVINAELSMVFLYAIAFLGIVLIFIMKFAHP IFLQVFNRYDDLNASVQENITNMRVVKAYVKEDYEISKFNKASYNIYRMFKKAENILIFN SPAMQLSMYACILAISWLGARMIVGGSMTTGELMSMMTYTTNILMSLMMLSMIFVMLSMS FASVQRIDEVLDEKSDIVSPEKAVTEVKDGSIDFHHVSFAYSADQEADSLEDIDLHIRSG ETIGILGGTGSGKSSLVQLIPRLYDVTKGSLYVGGVDVKEYDLDVLRNQVSMVLQNNVLF SGTIKDNLRWGNPNASDEEMLQACRLAQADEFIQRFPNGYDTHIEQGGSNVSGGQKQRLC IARALLKNPKILILDDSTSAVDTRTDYLIRKAFREDIPDITKLIISQRISSIEDADRIVV LDDGKINGIGTHAELLKTNEIYQEVYRTQVKGGDENAD >gi|312954969|gb|AENW01000049.1| GENE 18 18620 - 19048 582 142 aa, chain - ## HITS:1 COG:SA0322 KEGG:ns NR:ns ## COG: SA0322 COG1846 # Protein_GI_number: 15926035 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Staphylococcus aureus N315 # 8 138 7 135 139 64 32.0 6e-11 MADMHIGYLIKQVFLMNQARLNTIFAEFDLTASQTFTLIYLFKAHERGEQVHQKDIEDAM DISNPSVTGILNRLEHKGLIHRVASTKDARVKNIVVSEQALELDKILREKFKENEEELVT ALNDEEIACMQSCLLKMLGQKS >gi|312954969|gb|AENW01000049.1| GENE 19 19262 - 20332 1153 356 aa, chain - ## HITS:1 COG:lin0696 KEGG:ns NR:ns ## COG: lin0696 COG0463 # Protein_GI_number: 16799771 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Listeria innocua # 4 217 5 226 637 110 35.0 5e-24 MAGISVCMIVKNEEEVLARCLACVTSFADEIIVVDTGSTDKTKEIAAGFTDKLYDFAWCD DFSKARNYSFSKATQDFIMWLDADDVILQEDQEQLVELKQRLQPEVSIIMMKYHTAFDDK GNPTFSYYRERLMNRRMQHRWTGVIHEVIPLTGMVQYEDIAITHQKLHVNDPDRNLRIFE KLLAQGKQLDAREQFYYARELYYHARYHDALQVFEAFLDGKQGWVENNIDACEMMGYCHS ALQQKDEELQAYLQSFRYDAPRAELCCDIGKYFFDEKRWKEAVFWYETALHRTRDDKSGA FVRVDCYGYLPAIQLCVCYWQLHDRQASMHYNDIAGRYKPDSIAVQQNRKFFGNAS >gi|312954969|gb|AENW01000049.1| GENE 20 20366 - 21304 1039 312 aa, chain - ## HITS:1 COG:no KEGG:Bcer98_1704 NR:ns ## KEGG: Bcer98_1704 # Name: not_defined # Def: YVTN beta-propeller repeat-containing protein # Organism: B.cereus_NVH # Pathway: not_defined # 75 176 246 354 689 106 53.0 1e-21 MYRNRYDDNCEYDDYDSYRGFDEPKAGQDCGCRCDRDFDDNRSAEDEQGFAQEYYNCNSD GGSACDCGCDCNRPPRPPRPYPGIGPTGPMGPRGPRGPQGPRGLQGPQGREGLQGLRGPQ GNTGPQGVAGVQGPTGSTGPQGMPGERGATGARGATGAQGPQGPQGATGPAGESAPLVQF ASVSLQSFTDKQFCAQDAFVFDVGTIQSGFTISEDYQSVIAGHAGTYVVQFGCLLASQPC EGDAVALELNSSMIIEESRIPMLCEGSFVQGSCIVELGEGDSLRMVSDTSQGVNVCSFNN TVNAYLIVYQIN >gi|312954969|gb|AENW01000049.1| GENE 21 21392 - 22498 1157 368 aa, chain - ## HITS:1 COG:no KEGG:CFF8240_1775 NR:ns ## KEGG: CFF8240_1775 # Name: not_defined # Def: patatin # Organism: C.fetus # Pathway: not_defined # 1 355 1 347 361 288 40.0 2e-76 MKKEQMHIGLALSGGGMRAAIYHLGVLRYLAQQGLMGRVSHISTVSGASICMGLIYACNA NQWPSDTQFLERVLPAVKKCITQKDIQWHALLRLFLQPYYWDKKVNLLAKVMEQRWAVKG CLQDIASCPAWTINTTAYESGKDFRFSSARMGERDSSYVMHPSFALSHAVAASAGFPVLI GPYKLKTDKYIWTDATGTITVRPRDRVLHLWDGGVYDNMGLDPLFTTEQDGGLHRNINYL IVSNASGNIEHKTRKYSFSIENLKRLLDINMDQVESLRSQEVIDFFRRYHNGVYLKIGTT VKEIMQHCALSEEQRDAWIRSSMKEAEVQRVADYKTTLEKVSASDYDAILQHGYEIAKAT LSCFGNIA >gi|312954969|gb|AENW01000049.1| GENE 22 22716 - 22970 239 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAIWNRKEVMLTNDMERLAKARYALQGAGIVYTLKTKNFSAVHHGGPAIAQNSRHQDVM YYLYVHKKDEDRALHVIQEALRSS >gi|312954969|gb|AENW01000049.1| GENE 23 23235 - 24209 1154 324 aa, chain - ## HITS:1 COG:BS_pta KEGG:ns NR:ns ## COG: BS_pta COG0280 # Protein_GI_number: 16080818 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Bacillus subtilis # 1 319 4 321 323 319 51.0 4e-87 MINTLIEKIKGKGTRIVFTEGSDPRILEAAIRLHKENIVVPVLLGNRAEIAGSAAANGWD IEGIETLDPIEYKNMDMMVTKVIELRKGKLDEAQAREACLHRNFFGTMYVKLGCADGLLG GATYSTADTVRPALQLIKTRPGNSIVSSCFILMKDGEENLVMGDCSINIDPSADDLVEIT LQTAHTVRQFGIEPRVGLLSYSTLGSAKGASVAKVNEAATRLKRMPLDFAVEGEVQFDCA VAPEVAKLKAPDSKVAGNINTFIFPNIDAGNIGYKIASRLGGYEAIGPILQGLNAPINDL SRGCNAEEVFKMAIVTAAQKYMDI >gi|312954969|gb|AENW01000049.1| GENE 24 24725 - 25273 622 182 aa, chain + ## HITS:1 COG:no KEGG:NT01CX_2426 NR:ns ## KEGG: NT01CX_2426 # Name: not_defined # Def: hypothetical protein # Organism: C.novyi # Pathway: not_defined # 21 179 1 161 172 110 36.0 3e-23 MNFAKEIAGLPGLMKTSAEQLRKVPALTGTAMLTALNVVVGTLFIPITPTLRIGFSSIPA AVCGMYYGPICTGFAGVIADTLKYIIRPDGPYFPGFAVNEFLTGMIYGCFFYKKKITLPR VIIARACITVFINLILTSLWLNMMYQSPLFTMVRLIKNVVMFPVDVALLYAALKGAERVH RT Prediction of potential genes in microbial genomes Time: Sat May 14 02:55:31 2011 Seq name: gi|312954943|gb|AENW01000050.1| Clostridium sp. HGF2 contig00008, whole genome shotgun sequence Length of sequence - 31202 bp Number of predicted genes - 24, with homology - 21 Number of transcription units - 17, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 377 - 418 -1.0 1 1 Tu 1 . - CDS 482 - 3835 3932 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 3958 - 4017 4.9 2 2 Tu 1 . - CDS 4265 - 4627 385 ## DSY2341 hypothetical protein - Prom 4801 - 4860 5.2 - Term 4848 - 4882 -0.1 3 3 Op 1 . - CDS 5096 - 6484 1336 ## COG0362 6-phosphogluconate dehydrogenase 4 3 Op 2 . - CDS 6477 - 7514 1145 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 7638 - 7697 3.7 - Term 7528 - 7566 6.7 5 4 Op 1 13/0.000 - CDS 7712 - 8536 431 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 6 4 Op 2 13/0.000 - CDS 8539 - 9294 388 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 7 4 Op 3 9/0.000 - CDS 9309 - 9806 468 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 8 4 Op 4 3/0.000 - CDS 9819 - 10229 505 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 10274 - 10333 5.8 - Term 10273 - 10316 3.7 9 4 Op 5 . - CDS 10335 - 13106 3121 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 13274 - 13333 7.6 - Term 13486 - 13517 -0.7 10 5 Tu 1 . - CDS 13545 - 14564 763 ## gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 - Prom 14642 - 14701 1.7 11 6 Tu 1 . - CDS 15217 - 15855 839 ## gi|160915711|ref|ZP_02077919.1| hypothetical protein EUBDOL_01720 - Prom 15916 - 15975 5.2 + Prom 16015 - 16074 6.7 12 7 Op 1 8/0.000 + CDS 16254 - 18953 2329 ## COG3857 ATP-dependent nuclease, subunit B 13 7 Op 2 . + CDS 18946 - 22155 3043 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) + Term 22170 - 22209 2.3 - Term 22157 - 22195 0.3 14 8 Tu 1 . - CDS 22426 - 23199 720 ## Acfer_2051 hypothetical protein - Prom 23249 - 23308 2.2 - Term 23641 - 23670 0.5 15 9 Tu 1 . - CDS 23672 - 24229 676 ## RB2501_00496 beta-glucosidase - Prom 24255 - 24314 5.2 - Term 24344 - 24390 6.5 16 10 Tu 1 . - CDS 24406 - 25026 915 ## BDI_1616 hypothetical protein - Prom 25048 - 25107 7.8 17 11 Tu 1 . - CDS 25172 - 25777 408 ## COG0673 Predicted dehydrogenases and related proteins - Prom 25879 - 25938 6.4 18 12 Tu 1 . - CDS 26020 - 26400 110 ## SSUBM407_0049 transposase - Prom 26590 - 26649 5.2 19 13 Tu 1 . - CDS 26657 - 26830 111 ## - Prom 27013 - 27072 4.9 + Prom 27472 - 27531 8.2 20 14 Tu 1 . + CDS 27658 - 27798 73 ## + Term 27806 - 27855 4.6 21 15 Tu 1 . - CDS 27840 - 28556 79 ## COG0863 DNA modification methylase + Prom 28512 - 28571 7.0 22 16 Tu 1 . + CDS 28708 - 29562 145 ## COG0338 Site-specific DNA methylase + Prom 29598 - 29657 4.9 23 17 Op 1 . + CDS 29690 - 30889 236 ## Cthe_2471 hypothetical protein 24 17 Op 2 . + CDS 30905 - 31075 104 ## + Term 31105 - 31130 -0.5 Predicted protein(s) >gi|312954943|gb|AENW01000050.1| GENE 1 482 - 3835 3932 1117 aa, chain - ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 166 1115 110 1088 1089 567 35.0 1e-161 MRLTVDDIKRQTKSETKLIKARKVQQENLIKKIYIAKTQSEYHVEARMETLSGKFYATLQ FTLNAESDVDYYFCSCKRTKICEHLLAVLYQIHDLQPEKFPYSYERKEEEIAVQPAAQLP LLQQSPSPVKKEKQRTSAEKEAVPVKKGRLQMEILKEHQNIEAMVKENTRRRELMKQFAT SSHILQESKVYYQELQNREHVEKVHLFVEAEVTDQQHMYIALKIGDRKWYTISSLADFFE RLAQQTYAQYGMSLAFTHSINRFDEDSQDLIRFLKNCFYEGKTLVSNPSVMEIPPLYMDE FYELLGRLPQRYRNIQMKDKRQLLDIRVKSEEDFVLLTFRNWSLLKSGIRGRHHLYRMQD DTLYRYRFDEQGKCLELIDSLSEQQLYVRNEQFADFYKYVLSEIRDYANMYGIAKYAYTL EPIGLELYGDIDELGRVYFQLDVLYEDERIPGFQDEQEYLPLRQEIVENFIRQYADIIQP KEHCALFHDVSETLLEFMRDGLPFLSGYCEIFVSDVLKNMNKKHVVNLQAGLRLAGNLLE IDLHSRDIHKEELLDVLRAYRRKKHFYRLKNGKLLNLKSDQLEELDTMMQEFHIEDEQLQ QNCIQLPGYRLFMLDAFTKGSDSIAFHKEDVLQNILNSFQQISTQDIEIPQRYNELLRDY QKDGFRWLKLMHRYGFGGILADDMGLGKTLQVIAFLESEKQAGRTSIVVVPSSVLYNWED EVRKFASDLRVCCITGSQAKREELIRSSMDMDLLITSYDYLKRDIGYYESRTFFYKILDE AQYIKNQRTMNATSTKRLKSHHALALTGTPIENSLAELWSIFDFLMPGYLFDYRYFSHHF EKDIVLGKHKEKQEQLKKMVQPFILRRVKKEVLSELPEKTETTLSIAFDEAEETMYMANL AQVNKELQQELDLVKTNRFQVLGMLMRLRQICCDPRLVYEEVSQPSSKLKACMELVSSLV ENDKSVLLFSNFTSMLDLIQVELQHLHIPYFRMDGSTGKEERRELVQKFQDKEKKVFLIS LKSGGTGINLTAAEAVIHYDPWWNVSAENQASDRAYRIGQNSRVQVYKLIMRNTVEERIQ HLQQMKKELADIFVEENETNIMRMDKDQILELLKVSG >gi|312954943|gb|AENW01000050.1| GENE 2 4265 - 4627 385 120 aa, chain - ## HITS:1 COG:no KEGG:DSY2341 NR:ns ## KEGG: DSY2341 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: Two-component system [PATH:dsy02020] # 5 120 156 271 272 117 50.0 1e-25 MDTLTKELYEEVTNLLHDMGTPAHIKGHYYLRSAILEVYAHPELLKNMMNGLYATIAEAY DTTPSCVERSIRNAVEATLDRGDVDFLYSVFRNTISKNKGKPTNREFIMMVVDVLRVRHM >gi|312954943|gb|AENW01000050.1| GENE 3 5096 - 6484 1336 462 aa, chain - ## HITS:1 COG:L0046 KEGG:ns NR:ns ## COG: L0046 COG0362 # Protein_GI_number: 15672604 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Lactococcus lactis # 3 460 5 468 472 422 46.0 1e-118 MNNIGVYGLGVMGQSLARNIMQHGFSVSVYNIETEITKQFTQKYPKLFGYESLEAFVNSL EKPRKIILMVTAGRVVDSVIASLKPLLAKGDILIDCGNSYYEDTQRRMQSLQQDGFYLIG SGVSGGEKGALHGPSIMPSGEYRAYYEIADIFTAIAAKNEDGTACCTYIGKEGSGHFVKM VHNGIEYADMQLLAELYAILKRLYPKDRAAVQKAFHQLNQHNLASYLLDITEDILQKKEQ EEWLLDKVLDVAKQKGTGKWTACVSLEYGVPVPSLIEAVEARFLSSMKAQRLQAEQCYAG TQDEETGNEQLAADLYKAVLLAKTSIYAQGFSLIAAVNAQCGYHIDTKQLAVIWQNGCII KSEFLKDIYQAYDKDANLTNLLVSDQFTEYVKQGREDLQRIISFALQKGLYIPVLCSVMN YVNGYTTASLETNLIQAQRDCFGAHTYERVDQAGVFHSDWLK >gi|312954943|gb|AENW01000050.1| GENE 4 6477 - 7514 1145 345 aa, chain - ## HITS:1 COG:FN1186 KEGG:ns NR:ns ## COG: FN1186 COG1473 # Protein_GI_number: 19704521 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 1 334 21 353 359 178 33.0 2e-44 MKTGIAGLDTAFQAVFKKGNGPRIAVFAEYDALKGLGHACGHNLIATSALGCAVAVKQVL ESSELEGSIEVYGTPAEEDGGGKIIMLKQGVFDGLDAVFLMHPTSAMARIGGECASFTDF EIEYFGKSAHAESHPENGINALDAANLFYQAVGLARQQLRDSIHICCIIAESERDIGRIP DYARLEVEISTMRAKDIETTKQKIINIAEGMALASGCRVSYKEIPGYYGRMPNAVLAELC RQEMLALGEPMMEGMPSDAGGEDLGNVSRVIPACNLYMTLLPEKKISGHTDQFRELAISD AGKHCLDISSKAMANSILTLYQNPKLLKQAKEELKRRQEEEARYE >gi|312954943|gb|AENW01000050.1| GENE 5 7712 - 8536 431 274 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 4 274 15 286 286 215 41.0 6e-56 MTAAVKKSKITKKELFRAYNKWYWLCEVSHCYDRLQSLSFCASIQNTLRKLYPNDEEYQE ALLRHLQFFNTEGTIGSVIHGITMSLEEEKAANKEISGEMIIALKTGLMGPVAGIGDTLI WGTLKPICLALATTMALSNNLIGAFFVLLFPLAGYFIGYYMCRLGYSLGRNAISKLIQSG LMNRIIDACSILGLMMMGALSASFVSLTTTAGFKLENSDPILLQNILDGIMPGLLPFAVI TGIYFYMKKKGTKYGGILIGIIIASLILSFFDIV >gi|312954943|gb|AENW01000050.1| GENE 6 8539 - 9294 388 251 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 239 1 238 249 169 39.0 5e-42 MDTSLLLIAAFCGIWQFVSTTDFGYTLSDTLGQPVLVGALLGLLTGQVEQGLMIGGSLEL MYLGIIYPGGTVPACASSAALVAIPIALRTGLDAHAATVLAVPFGILGSILWNVKYSINS TFTIRAQKSVENGNYAAVTRNASVYPLILTFFLTAIPIFLANILAPTLVEGVINSIPTWA MHGIEVAGGVLPAIGFAMAVYTIGKMEFLPFFVIGYFLVIYFEVATMGVAIFGTCIALLY LFLKNKKEREV >gi|312954943|gb|AENW01000050.1| GENE 7 9309 - 9806 468 165 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 140 42.0 1e-33 MADINLVRIDFRLIHGQVVTKWVKQANANRIIIVNDMLAKDEFLASVYKMAAPSNVKVDI FTVDDAMAKWTTDQFGEGKVLLLFKNVSDIRNLQRLGFPLPEVQIGGLGGGSGRINTSSG ISFDAKDVQLLKEMIAEGSDIHIQVVPTQQKYEIEKVIEKLEFNE >gi|312954943|gb|AENW01000050.1| GENE 8 9819 - 10229 505 136 aa, chain - ## HITS:1 COG:lin0143_1 KEGG:ns NR:ns ## COG: lin0143_1 COG2893 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Listeria innocua # 5 105 2 105 156 73 41.0 8e-14 MEDNVWVFVCTHGRFGEELMKSAEMIAGEAENVFAFSLMPGMQPEDYRAMLEKQLEKLGD GKVLCLVDLFGGTPCTTCAILSKTYDMQVISGLNLAMYIEVTSQRNLRPRQELVEVGLEI LRDSGKDVIKLLNERK >gi|312954943|gb|AENW01000050.1| GENE 9 10335 - 13106 3121 923 aa, chain - ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 1 455 1 461 464 337 40.0 7e-92 MRRKSRVADTLKQLCADISLSSIQEGYEGVSAQQLSDFMGMDRANVSKELNQLFQENAVI KITGRPVYYFDRERMEVLLAHSLERFAVSSLQEYLQERGEVYTENDFDKLIGSDKSLKTM INKAKAAMIYPPFGLHTLLVGPTGAGKTMFAEIMYQYAKDHGVLQKTAPFVIFNCAEYAD NPQLLLGQLFGYVKGAYTGADRESEGLVEKAQNGVLFLDEIHRLPPEGQEMLFMLLDKGE YRKLGANETSKDARVLIIAATTENLESSLLQTFLRRIPMTITMPSLEERSIEERYELIEK FFRQEYNQVKIPIQVKAKVMRALLSYDCKGNIGQLKADIRLLCANGFLEHISRQDNVIRI TLSLLQEHIYHGLLNSGKQKEVDDFLTMHDQEIFVYDQETKLEHYDGEFLNIYEEMNRRF QDYEAKGFDNANINRHMRIYIETYIKTLSNQIEESGSEAMLYKIVSIHVYHAVEVALQLA QQRLGYPISKKVYTAMALHISALMENKRKEHELNANIYDVLSENPNEYHVAMEIMSFLQK ELEIPFPPQEIVFFTMFLCIEKDKPQVNGAIALLALAHGNGVARNMVDVANALLDTRHGH ALDMSLHQSVDDFLETVTRKVKEIDEGKGVFILVDMGSLLSFGEIITQKTGIPTKTIDMI STPFVLEALRKTMLSEYTLDDLYRELRSYTPYIGKLYSKEIKQKALHQNVIVTTCLSGEG AAVKLGELIRSAIPAIDEYHIDIVACNTESFKEKHLENKRILAVVGARDLHLEDTLYISS DKIILEDGLAKIAQIISTALGVEDREPVSSNIVMNNFLKESLVFLDPIKADDVIRKSFQV ISKMWDIDDYNRILIGYMMHVGCMIERCIRGAEMEYDACQERIQRNEKLYRLVRTAMKII EREFQIRISDTEVAYIMDNFDTE >gi|312954943|gb|AENW01000050.1| GENE 10 13545 - 14564 763 339 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914792|ref|ZP_02077006.1| ## NR: gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 [Eubacterium dolichum DSM 3991] # 22 339 20 315 323 214 40.0 5e-54 MTTKMKTEAAAMISCYDHKKKYDMYCKKLLSNKQILAYVMKGCIPEYADIPLEDIPSYIE MSSINTAECEYIDDHQVEVTDETIPGAQIKYDIQFEATIPMKHKKAGRNTPADKKVRMII NLESQAKDDPGYPLIKRALYYCSRLMARQKHPKDGFQHSDYDRIKKVCSIWICIGHNNQK NDVINTYKIQETCETKIWHAAREDYDLLTAVMVYPKKEGIRKAQDIPNAVEQEDENKQRL LELLKILFIKNLVIEDKKEQLQKTYGILMEKEIDKEVMTMCNFSDFIEQRGKEEGKVEAT LLHVKKLMQKIDVSAVDAMNILDVEEDIRPTVLQSLHLS >gi|312954943|gb|AENW01000050.1| GENE 11 15217 - 15855 839 212 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160915711|ref|ZP_02077919.1| ## NR: gi|160915711|ref|ZP_02077919.1| hypothetical protein EUBDOL_01720 [Eubacterium dolichum DSM 3991] # 6 204 2 199 260 72 27.0 1e-11 MKKYFQFKKEEKAVLAIGILMIAVVLTAGLLKQKFVKAEAYVPLKEEQQSVNAIAAKKET FIIEQNAKLSQKAETYVNADSDVLKKVKLDLSAVDVTTPGTYQAVASLQKERVSFAIKVV ENAKPVIQAAHADFQFVIESNSTMQEVRDYAGVTAADASGNDLSALITGWDEELPVEAKT VTYQLSVEDAQGQRAKKSVRVQYLLPKEDKKD >gi|312954943|gb|AENW01000050.1| GENE 12 16254 - 18953 2329 899 aa, chain + ## HITS:1 COG:lin2369 KEGG:ns NR:ns ## COG: lin2369 COG3857 # Protein_GI_number: 16801432 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Listeria innocua # 538 888 768 1152 1157 90 23.0 1e-17 MTFLQTLGPGSTLIAPAYLHAALREELLKTRSGMLGLKLNTLQGWLQQQANVAVPSRHVA LYQYKQRIQTILPQLKIYREVADSPVFLNECRSFLDSIYFWNIPQSELPQESEAQKELFA ILSQLTDIAVPSKQQRAALTNIKTKRLDDLHILDVYHTLEEEQLIQALVAQGAQRCTPPV YEPMPLFFHAVNKRQEIEACAQYIIEHDLDADDIHITLANATYKPILAQIFQRYQIPYTL LQDSHASILPHRFSALFSYYLKPDTENLLRVLDCGVVHMEQLQKLKDYLDVFSCDIEEAF DHLQQIEDEGHILDALELAKLQKLEEEAELVRQQLVVYLRPLKQPISMEAMIQTAASYVR ESLRRDDADTKILLDIEAMLKELHPYILEKEDIAFFLYFLDGMTQSSAPTERSGAIVCDL RQSPFCRKHLFVLGCTQKDYPAFQTKKGIFDENYHALISAYPSMERRYQFYLKQISAMLY AAPSVYVSYPLGTYEGKGMEAALEIEDYVQKQHANPKAGSVAYPLYSSYEPVSTNITLSP EMAQALFVKDKMIRGSISALERYVKCPFSYFLRYGLSLREPMKVGFPDSYAGTLAHYLLE TFTGKYGKAYTKVAEEKIEEVLMKEIRIMQDVFPSLEKKLENVAQRILTSMTQTLGLLDD FEQHSILSPYLREKEFHYSIPLGDDISLALKGYIDRIDASDEFLCILDYKSSAKMLSEAN VFAALQLQLLTYSIVCSKEFHKRVIGSFYVSLKNENIPYTAGKLSRRKPVTHLPSSKEEY EEIRHKAHRMNGWVMDSDIQALDDNGAHIVGVSQNKEGIIKPRKLYDLGSIERYFTKMYQ MIGNRIINGDIRCLPMEEACMFCSYYEICRFKGIYAEKTQLVEVEDDIYQQQKGREEDA >gi|312954943|gb|AENW01000050.1| GENE 13 18946 - 22155 3043 1069 aa, chain + ## HITS:1 COG:SA0828 KEGG:ns NR:ns ## COG: SA0828 COG1074 # Protein_GI_number: 15926556 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Staphylococcus aureus N315 # 4 826 12 869 1217 306 27.0 1e-82 MPEWNPMQLKAIQTKEHNILVSASAGSGKTTVLIARLMDLVMKDHVSIDSILAMTFTEAA ANEMKKRLATELQKALTAARTEEEKSYITRQLTGIQTAHISTIHSFCLSIIQEYYYILGL DPQRIKSIMDNGTMVLFQQQSLEEAFAKQYQLQDASFLQLCQMFSARAENDEALRTMIMN LAGLASSKSDPEAWLDSLAENYHEKRLLEDLPKEIYENFFEYLVVQTARYEETLVRIDEL YRLKYDDQVKKHAIVEQKLLALQDLHQALQNQDYQAYRAAFLAIVHAVVPPSPDKEDKEY ARLRKSLLALEDAQLEILFSEDEFMRDIRYLYPYIKKLVDMCRDYRSAYARIKEKHKVID FDDMEHFALEILQAKGGRVADIYREKFVEIMVDEFQDSNDVQNQLVMLICRKNNVFRVGD IKQSIYGFRHAKPSLMKGLIDHRGVFDEVIYLSNNYRSKKMIVDFNNDLFKLLMNIDGFS CSYAKEDDVETGVPAQNEDNVPICFHAVYHNEIKEAEGIIVSKNELKASYIANQILEIKE REQRKWKDFVVLVRGNARKDDMKKIFDELNIPYFIDIKYGFYQSNAVQVILSAMKCILHP HDDISFTATMLSPLFRKSTMDFAQAKLQKEKGQSYYSWFCEHPFPGFEILQELIFQHGRL RISELINKLYEMQDYYRLHTSIQEKTNLDLLFEKAVQFEDQYASGLSSFLSQIEQIKDAQ TAEAIPIGAEADVVRVMSIHQSKGLQFPVVFLWSTDKQTPIEFKDFCISDSELGLAMKAM DLPQRYVRTTIPRIAMEHKKDKEELEEEMRILYVATTRAQTQMHIVDCILELDTYKHPLS MSQVYNRNGYTSWILQTFLCNPSPLFTVKEVHRLWHSEVQQAEAGIYHPFRVYEKPSKSI ELVTASAQEARELPAFTFDDDMQGSDYGTMMHKMIEALQAPIWSRDVILQVANQQLVELK EWDIQTLLQLGKDPDYLLAYRGDVHHEMPFMVKDGLQILHGYMDFVSIQNDRMIILDFKT DSLKEDAEFIQRYKGQLAMYKKAMHILYPKHSITTCIYSLHLHRMIAIS >gi|312954943|gb|AENW01000050.1| GENE 14 22426 - 23199 720 257 aa, chain - ## HITS:1 COG:no KEGG:Acfer_2051 NR:ns ## KEGG: Acfer_2051 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 15 255 20 266 271 234 50.0 3e-60 MKKTIIFCMAAVLLFGCSVKTEEKENYSDEMKIAHTVDLSEDDGADSVEREGDQKESPYF KHPDFYHMKSTGTLTLLPKFKTMQQTSEWSCGVDAALMVLQYYGKLGKHNEETLAQLRTN KLKSEATSLQSMIQIFEGVGGFQIHSTYDYRESDYDKINLRMIQDFLKKGIPVMVAWNDW GGHWQVIIGYDTMGTETTQDDVLIVADSYDTTDHNQDGYGIYPAERFYYNWTMYDFFSKN YGIAERDKLFIAAEPKA >gi|312954943|gb|AENW01000050.1| GENE 15 23672 - 24229 676 185 aa, chain - ## HITS:1 COG:no KEGG:RB2501_00496 NR:ns ## KEGG: RB2501_00496 # Name: not_defined # Def: beta-glucosidase # Organism: R.biformata # Pathway: Cyanoamino acid metabolism [PATH:rbi00460]; Starch and sucrose metabolism [PATH:rbi00500]; Biosynthesis of secondary metabolites [PATH:rbi01110] # 2 159 26 185 778 93 31.0 4e-18 MQWKLTHRHNHECIENKGGKTLSYDPNLGIQIIEQDGFAFKDLDNNGRLDPYEDWRLPLT QRIQDFTSRFVLWQEGDCLYYRKGRIELSREFCDWMKNCDCRTTILQASDLLQEDEEYLR ENYILAMLLLMFDNDFDMGKEDYLLQLIVQSMDLGVLENIIYSIMEALKKYVTKRSAGVQ QELIL >gi|312954943|gb|AENW01000050.1| GENE 16 24406 - 25026 915 206 aa, chain - ## HITS:1 COG:no KEGG:BDI_1616 NR:ns ## KEGG: BDI_1616 # Name: not_defined # Def: hypothetical protein # Organism: P.distasonis # Pathway: not_defined # 1 204 1 206 215 189 45.0 7e-47 MENKTIITISRQFGSGGREIGKKIADQLGIPFYDKELIEIAAKESGMDKELFEEDDARTS KGFRLLGALGYSLGGPLSTITELSLNDRLYLVQEEVIKGVACEGSCVIVGRCADYVLRDR SDVLNVYIHADMEDRKERAVHSYEVDERDIEGSIKKIDKRRANYYEYYTDRKWGRAENYD ISINSSTFGIDGTVEIIKMLAQKKAL >gi|312954943|gb|AENW01000050.1| GENE 17 25172 - 25777 408 201 aa, chain - ## HITS:1 COG:ECs4289 KEGG:ns NR:ns ## COG: ECs4289 COG0673 # Protein_GI_number: 15833543 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli O157:H7 # 5 199 138 336 345 154 43.0 1e-37 MQDIIESGKLGTLIEIESHYDYFKTRPVVTQDMIFNLGIHTIDQMIALFGIPDRTDYDVK GILNKEEGADDYFDIKLYYGKLKVSVKTSLFVKLPYPRFLVHGTNGSFMKYSQGHLFAKS AQEPIKASFLQEPEDNWGVLSYMDEYGNDITTRIPSRVTDYGKIYDDLYACIYQGKAPYV KAEEVVAVLNIAEEAEKAAGN >gi|312954943|gb|AENW01000050.1| GENE 18 26020 - 26400 110 126 aa, chain - ## HITS:1 COG:no KEGG:SSUBM407_0049 NR:ns ## KEGG: SSUBM407_0049 # Name: not_defined # Def: transposase # Organism: S.suis_BM407 # Pathway: not_defined # 7 126 202 312 312 67 39.0 2e-10 MVYRIIFRDLKYLADQCAVHTKKRESIQQEIWARMILYNISFIMAHHVVNHKPKVKGKDR KYSYAINKKMAIHHCRYFIQHRKRKGGHPPDLETLISQELLPIRPIRKCKRHVKSQTLVC FNYRFS >gi|312954943|gb|AENW01000050.1| GENE 19 26657 - 26830 111 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWEMVERFHEDNAIFIADRNYATCNNMAHIIHLGKSFLIRVKDIHSISSLLIIQSAR >gi|312954943|gb|AENW01000050.1| GENE 20 27658 - 27798 73 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVEEYKVEWHVIEQLKQQNLMEWVRKMNVIENIVDEVIKKELIIQ >gi|312954943|gb|AENW01000050.1| GENE 21 27840 - 28556 79 238 aa, chain - ## HITS:1 COG:TVN0442 KEGG:ns NR:ns ## COG: TVN0442 COG0863 # Protein_GI_number: 13541273 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Thermoplasma volcanium # 10 238 109 346 347 151 37.0 1e-36 MNTYKLQNTTIWNFPDRGNWATHKGDYRGNWSPHVPKNLILKYTEQKDLVLDCFVGSGTT LIEAKLLDRNAIGIDINKKALEITRNRLNFDCNNNAHIQLHLGDAQNLKMVKDNSIDFIC THPPYADIIKYSKNIENDISNLEYNEFLAHMNQVSKELYRVLKPSHFCSFMIGDIRKKGN VIPLGFLTMQTFINNGFTLKEIIIKEQHNCSSTSYWNDKSKTLGFYLLAHEYIFVLYK >gi|312954943|gb|AENW01000050.1| GENE 22 28708 - 29562 145 284 aa, chain + ## HITS:1 COG:all0061 KEGG:ns NR:ns ## COG: all0061 COG0338 # Protein_GI_number: 17227557 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Nostoc sp. PCC 7120 # 11 281 13 277 277 234 45.0 1e-61 MANQKNLLLSPVLKWVGGKRQLLNEIIPMIPSNCSTYVEPFIGGGAVLFEFQPKKAIIND YNSELVNVYTVIKDHPEELIKELQFHKDNNTGEHFYMVREYDRKTEFFSQMTDVQKAARI IYLNKTCYNGLYRVNSAGQFNSPYGKYKNPNIVNEHVIRAMSKYFNDNAITIKNGDYKEV LKGLRKGAIVYLDPPYMPISTSSSFTGYTENGFNADKQRELKKECDKLSKKGIKFLQSNS DCEFIRELYKDYNIRIIKAKRSINSKGNSRGEINEVLIYNYEQE >gi|312954943|gb|AENW01000050.1| GENE 23 29690 - 30889 236 399 aa, chain + ## HITS:1 COG:no KEGG:Cthe_2471 NR:ns ## KEGG: Cthe_2471 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 1 398 45 426 426 289 42.0 1e-76 MSKWDSSEQLPSILKKNKINILPNSRHSYVLGDFLLYQDIPELEEHITKMTSVELPEYES IDVDNITSEANAINVLILSKILDDFLETHENVGTFNGRMGTGIFDFNVDTHRGVKRSIVV NNAQCEIDGGFENLDSVVIMEAKNVVHPDFHVRQLYYPYRLWKTKVNKPIRLVFSIYSNK IYRLFEYEFTDINDYSSIKLIKNKNYSLQDTEITLEELIEVSNETRVKYTDNQNNKNLPP FVQADSFERIISLLENMYDNPMNDEEIAELMHFGFNFSNNKPVYRQSQYYYNAGKYLGLF EKIKTEENEAKSVLTSLGKKIYKMQYKQRQLKLVSLILEHQIFSEFFDLIVENFGELPEK EIIQKRMRELNVCNESQIVRRSQSVRCWLKWIFNLIKLS >gi|312954943|gb|AENW01000050.1| GENE 24 30905 - 31075 104 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKNDKRPIIQANGYNGSEPTRVCPKCGKKKPISEFGYRKMGDGTIRNQSWCKDCR Prediction of potential genes in microbial genomes Time: Sat May 14 02:56:23 2011 Seq name: gi|312954942|gb|AENW01000051.1| Clostridium sp. HGF2 contig00084, whole genome shotgun sequence Length of sequence - 772 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sat May 14 02:57:02 2011 Seq name: gi|312954810|gb|AENW01000052.1| Clostridium sp. HGF2 contig00004, whole genome shotgun sequence Length of sequence - 123764 bp Number of predicted genes - 128, with homology - 114 Number of transcription units - 51, operones - 31 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 - CDS 78 - 1283 1215 ## COG2721 Altronate dehydratase 2 1 Op 2 . - CDS 1332 - 1607 253 ## COG2721 Altronate dehydratase - Prom 1671 - 1730 2.0 3 2 Op 1 . - CDS 1742 - 2386 784 ## COG0036 Pentose-5-phosphate-3-epimerase 4 2 Op 2 . - CDS 2383 - 3069 481 ## COG0036 Pentose-5-phosphate-3-epimerase 5 2 Op 3 . - CDS 3071 - 4201 1457 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 6 2 Op 4 . - CDS 4198 - 5388 1609 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 7 2 Op 5 . - CDS 5452 - 6408 1160 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 8 2 Op 6 . - CDS 6410 - 7042 851 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 9 2 Op 7 . - CDS 7053 - 7550 352 ## 10 2 Op 8 4/0.000 - CDS 7570 - 7983 664 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 8082 - 8141 1.9 - Term 8067 - 8108 0.2 11 2 Op 9 13/0.000 - CDS 8148 - 8972 1096 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 12 2 Op 10 13/0.000 - CDS 8975 - 9727 1002 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 13 2 Op 11 . - CDS 9838 - 10323 583 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 14 2 Op 12 . - CDS 10354 - 11010 827 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 15 2 Op 13 . - CDS 11024 - 12007 988 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 12354 - 12393 4.4 16 3 Tu 1 . - CDS 12580 - 12843 135 ## - Prom 13088 - 13147 5.9 - Term 13924 - 13955 -1.0 17 4 Tu 1 . - CDS 14007 - 14960 959 ## COG1052 Lactate dehydrogenase and related dehydrogenases 18 5 Op 1 . - CDS 15020 - 16174 943 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 19 5 Op 2 . - CDS 16178 - 16885 676 ## Plim_3793 demethylmenaquinone methyltransferase-like protein 20 5 Op 3 . - CDS 16957 - 17883 1126 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 17976 - 18004 -0.9 21 6 Op 1 3/0.000 - CDS 18094 - 18921 1097 ## COG0191 Fructose/tagatose bisphosphate aldolase 22 6 Op 2 . - CDS 18923 - 19978 1101 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 20213 - 20272 4.3 + Prom 20200 - 20259 4.1 23 7 Tu 1 . + CDS 20317 - 22701 2410 ## Sterm_0952 hypothetical protein + Term 22737 - 22765 1.0 + Prom 22882 - 22941 4.9 24 8 Op 1 3/0.000 + CDS 22970 - 23617 780 ## COG1309 Transcriptional regulator 25 8 Op 2 45/0.000 + CDS 23688 - 24629 367 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 26 8 Op 3 . + CDS 24626 - 25396 665 ## COG0842 ABC-type multidrug transport system, permease component + Term 25625 - 25669 1.1 + Prom 25495 - 25554 5.6 27 9 Tu 1 . + CDS 25685 - 25780 92 ## + Prom 26046 - 26105 6.7 28 10 Tu 1 . + CDS 26237 - 26332 98 ## + Term 26520 - 26590 -0.2 29 11 Op 1 . - CDS 26693 - 27739 934 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 30 11 Op 2 . - CDS 27732 - 28910 1602 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 29001 - 29042 3.4 31 12 Op 1 . - CDS 29048 - 29695 598 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 32 12 Op 2 . - CDS 29757 - 30230 686 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 33 12 Op 3 . - CDS 30246 - 31175 914 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 34 12 Op 4 13/0.000 - CDS 31189 - 32016 1133 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 35 12 Op 5 11/0.000 - CDS 32013 - 32780 1022 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 36 12 Op 6 . - CDS 32806 - 33225 504 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 33383 - 33442 8.2 + Prom 33342 - 33401 7.7 37 13 Tu 1 . + CDS 33564 - 35987 2464 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 38 14 Op 1 . - CDS 36186 - 36455 271 ## TDE1954 prevent-host-death family protein 39 14 Op 2 2/0.000 - CDS 36515 - 37219 876 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 40 14 Op 3 13/0.000 - CDS 37287 - 38084 1066 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 41 14 Op 4 13/0.000 - CDS 38071 - 38874 942 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 42 14 Op 5 . - CDS 38903 - 39370 604 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Term 39393 - 39437 5.5 43 15 Op 1 . - CDS 39445 - 42177 3292 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 44 15 Op 2 . - CDS 42234 - 42737 594 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 42792 - 42851 10.6 - Term 43058 - 43102 6.9 45 16 Op 1 17/0.000 - CDS 43110 - 44549 1707 ## COG0297 Glycogen synthase 46 16 Op 2 7/0.000 - CDS 44549 - 45664 1334 ## COG0448 ADP-glucose pyrophosphorylase 47 16 Op 3 . - CDS 45666 - 46802 1197 ## COG0448 ADP-glucose pyrophosphorylase - Prom 46831 - 46890 7.4 48 17 Op 1 13/0.000 - CDS 47086 - 47841 229 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 49 17 Op 2 9/0.000 - CDS 47834 - 48706 1171 ## COG4120 ABC-type uncharacterized transport system, permease component - Prom 48884 - 48943 4.2 50 17 Op 3 . - CDS 48958 - 49947 1295 ## COG2984 ABC-type uncharacterized transport system, periplasmic component - Prom 50054 - 50113 2.1 51 18 Op 1 . - CDS 50381 - 50578 70 ## 52 18 Op 2 1/0.143 - CDS 50590 - 51321 751 ## COG0789 Predicted transcriptional regulators - Prom 51527 - 51586 3.9 - Term 51569 - 51619 2.2 53 19 Op 1 40/0.000 - CDS 51698 - 52972 956 ## COG0642 Signal transduction histidine kinase 54 19 Op 2 . - CDS 52959 - 53636 817 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 55 19 Op 3 . - CDS 53643 - 54413 208 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 56 19 Op 4 . - CDS 54427 - 56799 2289 ## GBAA_2481 ABC transporter permease - Prom 56819 - 56878 3.5 - Term 56951 - 56987 2.0 57 20 Op 1 . - CDS 57047 - 57523 603 ## COG1576 Uncharacterized conserved protein 58 20 Op 2 . - CDS 57520 - 58044 496 ## COG1418 Predicted HD superfamily hydrolase + Prom 58293 - 58352 8.6 59 21 Tu 1 . + CDS 58395 - 59228 960 ## gi|293400284|ref|ZP_06644430.1| type IV pilus biogenesis protein 60 22 Op 1 . - CDS 59306 - 59923 855 ## COG1309 Transcriptional regulator 61 22 Op 2 . - CDS 59951 - 60178 199 ## Sterm_0016 metallophosphoesterase 62 22 Op 3 . - CDS 60184 - 60537 280 ## COG4186 Predicted phosphoesterase or phosphohydrolase 63 22 Op 4 3/0.000 - CDS 60557 - 61645 1437 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 64 22 Op 5 . - CDS 61642 - 62388 737 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - Prom 62448 - 62507 1.5 - Term 62434 - 62463 -0.3 65 23 Op 1 16/0.000 - CDS 62516 - 63862 1500 ## COG0305 Replicative DNA helicase 66 23 Op 2 9/0.000 - CDS 63871 - 64317 397 ## PROTEIN SUPPORTED gi|167754867|ref|ZP_02426994.1| hypothetical protein CLORAM_00371 67 23 Op 3 . - CDS 64295 - 66292 763 ## PROTEIN SUPPORTED gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein 68 23 Op 4 . - CDS 66270 - 67193 1015 ## gi|293400278|ref|ZP_06644424.1| hypothetical protein HMPREF0863_00562 - Term 67256 - 67291 2.0 69 24 Op 1 21/0.000 - CDS 67305 - 67535 354 ## PROTEIN SUPPORTED gi|167755264|ref|ZP_02427391.1| hypothetical protein CLORAM_00769 70 24 Op 2 24/0.000 - CDS 67556 - 68032 534 ## COG0629 Single-stranded DNA-binding protein 71 24 Op 3 . - CDS 68052 - 68345 254 ## PROTEIN SUPPORTED gi|167755262|ref|ZP_02427389.1| hypothetical protein CLORAM_00767 - Prom 68419 - 68478 6.1 + Prom 68622 - 68681 8.8 72 25 Tu 1 . + CDS 68787 - 68984 74 ## + Prom 68999 - 69058 8.6 73 26 Tu 1 . + CDS 69268 - 69486 249 ## - Term 69512 - 69561 4.6 74 27 Op 1 . - CDS 69641 - 70276 694 ## Cbei_2704 RDD domain-containing protein 75 27 Op 2 . - CDS 70281 - 71465 1109 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 76 27 Op 3 . - CDS 71455 - 72558 1438 ## COG0006 Xaa-Pro aminopeptidase - Term 72578 - 72613 5.1 77 28 Op 1 10/0.000 - CDS 72628 - 73953 1655 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 78 28 Op 2 8/0.000 - CDS 73994 - 74326 470 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 79 28 Op 3 . - CDS 74328 - 74648 394 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 80 28 Op 4 3/0.000 - CDS 74664 - 75707 1144 ## COG1363 Cellulase M and related proteins 81 28 Op 5 . - CDS 75704 - 77602 1829 ## COG3711 Transcriptional antiterminator - Prom 77638 - 77697 5.0 82 29 Tu 1 . + CDS 78042 - 78197 171 ## + Term 78309 - 78363 4.5 - Term 78289 - 78357 2.6 83 30 Tu 1 . - CDS 78392 - 79216 916 ## - Prom 79294 - 79353 6.4 + Prom 79416 - 79475 7.8 84 31 Tu 1 . + CDS 79497 - 80852 1705 ## COG0534 Na+-driven multidrug efflux pump + Term 80860 - 80925 2.1 - Term 80846 - 80911 2.1 85 32 Tu 1 . - CDS 80917 - 82230 1130 ## COG0513 Superfamily II DNA and RNA helicases - Prom 82309 - 82368 4.4 - Term 82629 - 82684 13.2 86 33 Op 1 . - CDS 82708 - 83520 829 ## COG0561 Predicted hydrolases of the HAD superfamily 87 33 Op 2 8/0.000 - CDS 83517 - 84362 882 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 88 33 Op 3 . - CDS 84359 - 85066 968 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 89 33 Op 4 . - CDS 85077 - 86102 1356 ## Smon_1317 FG-GAP repeat protein - Prom 86144 - 86203 3.3 - Term 86184 - 86212 -1.0 90 34 Op 1 11/0.000 - CDS 86223 - 86522 365 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 91 34 Op 2 2/0.000 - CDS 86559 - 88031 1958 ## COG3037 Uncharacterized protein conserved in bacteria 92 34 Op 3 . - CDS 88058 - 88513 680 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 93 34 Op 4 . - CDS 88526 - 89584 1303 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 89757 - 89816 6.7 + Prom 89748 - 89807 6.4 94 35 Op 1 . + CDS 89827 - 90624 926 ## 95 35 Op 2 . + CDS 90645 - 91448 947 ## COG1349 Transcriptional regulators of sugar metabolism + Term 91487 - 91527 5.5 + Prom 92203 - 92262 4.7 96 36 Tu 1 . + CDS 92288 - 92962 351 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 + Term 92971 - 93019 4.2 + Prom 92976 - 93035 5.2 97 37 Tu 1 . + CDS 93138 - 93854 521 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 94074 - 94118 2.0 - Term 94060 - 94106 3.3 98 38 Op 1 6/0.000 - CDS 94128 - 94493 398 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 99 38 Op 2 . - CDS 94512 - 96044 1152 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 100 38 Op 3 1/0.143 - CDS 96073 - 97113 1086 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 97316 - 97375 3.6 - Term 97308 - 97359 8.1 101 39 Tu 1 . - CDS 97468 - 98760 1676 ## COG4091 Predicted homoserine dehydrogenase - Prom 98807 - 98866 4.0 102 40 Op 1 6/0.000 - CDS 98890 - 99255 448 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 103 40 Op 2 6/0.000 - CDS 99267 - 100265 1184 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 104 40 Op 3 . - CDS 100269 - 100811 608 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 105 40 Op 4 . - CDS 100831 - 101289 523 ## LSL_1892 sorbitol operon activator 106 40 Op 5 . - CDS 101274 - 102275 907 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 107 40 Op 6 . - CDS 102272 - 102481 71 ## - Prom 102542 - 102601 6.7 + Prom 102527 - 102586 8.2 108 41 Op 1 . + CDS 102736 - 103995 1480 ## COG0006 Xaa-Pro aminopeptidase 109 41 Op 2 . + CDS 104041 - 104538 380 ## COG1970 Large-conductance mechanosensitive channel + Term 104546 - 104595 4.0 - Term 104376 - 104414 -0.2 110 42 Op 1 . - CDS 104617 - 105369 948 ## COG0300 Short-chain dehydrogenases of various substrate specificities 111 42 Op 2 . - CDS 105415 - 106755 1664 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 106775 - 106834 3.4 - Term 107210 - 107268 4.1 112 43 Op 1 4/0.000 - CDS 107373 - 107723 399 ## COG3862 Uncharacterized protein with conserved CXXC pairs 113 43 Op 2 6/0.000 - CDS 107727 - 108989 1557 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 114 43 Op 3 . - CDS 108986 - 110431 1502 ## COG0579 Predicted dehydrogenase + Prom 110612 - 110671 6.6 115 44 Tu 1 . + CDS 110742 - 111830 877 ## COG1609 Transcriptional regulators - Term 112048 - 112097 4.3 116 45 Tu 1 . - CDS 112178 - 114109 746 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 114158 - 114217 4.5 + Prom 114136 - 114195 3.8 117 46 Tu 1 . + CDS 114287 - 114463 224 ## + Term 114536 - 114567 3.2 - Term 114524 - 114556 2.0 118 47 Op 1 . - CDS 114557 - 114934 442 ## COG0346 Lactoylglutathione lyase and related lyases 119 47 Op 2 . - CDS 114985 - 115251 288 ## EUBREC_3540 hypothetical protein 120 47 Op 3 . - CDS 115260 - 116510 1386 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 116627 - 116686 4.1 + Prom 116578 - 116637 6.5 121 48 Tu 1 . + CDS 116657 - 117241 574 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 117313 - 117359 4.3 + Prom 117343 - 117402 14.5 122 49 Op 1 . + CDS 117438 - 117677 193 ## 123 49 Op 2 . + CDS 117722 - 117940 400 ## gi|293402309|ref|ZP_06646446.1| hypothetical protein HMPREF0863_02587 + Term 117944 - 117979 3.1 + Prom 117943 - 118002 3.7 124 50 Op 1 40/0.000 + CDS 118022 - 118696 918 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 125 50 Op 2 . + CDS 118686 - 119699 1126 ## COG0642 Signal transduction histidine kinase + Term 119740 - 119773 3.8 + Prom 119745 - 119804 4.0 126 51 Op 1 . + CDS 119864 - 120070 329 ## 127 51 Op 2 36/0.000 + CDS 120067 - 120834 260 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 128 51 Op 3 . + CDS 120824 - 122866 1475 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 122873 - 122906 1.3 Predicted protein(s) >gi|312954810|gb|AENW01000052.1| GENE 1 78 - 1283 1215 401 aa, chain - ## HITS:1 COG:STM0650 KEGG:ns NR:ns ## COG: STM0650 COG2721 # Protein_GI_number: 16764027 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Salmonella typhimurium LT2 # 3 383 8 387 390 363 48.0 1e-100 MRFRGYRRNDGRIGIRNHVLILPASICASDVAHQVTMQVQGTVSFHNQLGCSQTPNDQEC TLRTMAGMAANPNVYGTIIISLGCENCQMKLVTEEIQSRCDKPLKAFIIQECGGTLHTVE QAVRCAREMVAQASCMQREEADVSELMVAMECGGSDPTSGLAANPLVGEVADSIIASGGT AVMSETTEFIGAEKLLAKRAVNAQVSAQILEIVRHYEDAMKCVNDDVRKRNPSPGNKAGG ITTLEEKSLGCIYKSGHSPIQAVYDYAQDIHHKGLVIMDTPGNDPISMSGMAAGGCQLVL FTTGRGTPTGNPIVPVIKLSANRDTAVVMRDNLDFDASGYLYGSTTMRQLRDALLEEICA VAGGKLTRSEILGYCETAIARVGRYVKNEGEMKGCVETYYY >gi|312954810|gb|AENW01000052.1| GENE 2 1332 - 1607 253 91 aa, chain - ## HITS:1 COG:AGl2029 KEGG:ns NR:ns ## COG: AGl2029 COG2721 # Protein_GI_number: 15891133 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 86 1 77 503 68 44.0 3e-12 MKNAVRIHERDNVAVVIEPISKGELCIYTDAQGMEQGVAVRECIPVYHKLALSRIHKGEP VVKYGEWIGIAACDIEQGMHVHVHNVWNTKR >gi|312954810|gb|AENW01000052.1| GENE 3 1742 - 2386 784 214 aa, chain - ## HITS:1 COG:sll0807 KEGG:ns NR:ns ## COG: sll0807 COG0036 # Protein_GI_number: 16330729 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Synechocystis # 1 213 5 219 230 156 41.0 3e-38 MILCPSMMCASYANLEEEVRALEEAGTDIFHCDIMDGSFVPNISMGLMDVKAVRALTKKM VDVHLMIDHPADKIDWFLDAGADLIYIHPESEPQAMKTLMYIRSRGKLSGLAVNPDTSLS AVKELLPHCDYLLIMSVFPGFAGQTFIDSVDTKIRELIACKKMYGYRIILDGACSPAVIQ EYHALSVDGFVLGTSALFHGEGSYVENMNLLRSL >gi|312954810|gb|AENW01000052.1| GENE 4 2383 - 3069 481 228 aa, chain - ## HITS:1 COG:lin0499 KEGG:ns NR:ns ## COG: lin0499 COG0036 # Protein_GI_number: 16799574 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Listeria innocua # 11 225 3 217 222 119 30.0 5e-27 MRTVSKDKKILVSASLSCADLLHVSDAVAQINASDIDFVHYDVVDGMFNNCFVFGDLILE KIRPICDKPIEVHLAVQNVRPYIEPFARAGADYIAVHYEIDDDLEDIFAHIRSAGCRPVL AMQCDTEVPSDFVKLASQVDWILKLMVQPGYAGQHMQREAVEHIRSMKEQITANCLSCRI QADGNIHTGTIPQVCAAGASILTGGTSGLFRQDADLQENLRRMKEAAS >gi|312954810|gb|AENW01000052.1| GENE 5 3071 - 4201 1457 376 aa, chain - ## HITS:1 COG:SA1963 KEGG:ns NR:ns ## COG: SA1963 COG0246 # Protein_GI_number: 15927740 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Staphylococcus aureus N315 # 3 329 2 333 368 100 24.0 6e-21 MKKAVVIGAGQTGRGYVTRFLFQSDYAITFIDKNEKLIRMLDEDRAFCIHFYKKDRTPIY VNGFQAFHTYSKEADRAIQDADFIVTSTGEQNLGDVAQQVKAGMHNKQKKTVFLTAENGI NPAKVLRTHLQEAGVEGDYTVTQTAVFCSTVSVHDTRLDILSMNEAYFPFDADELEELDF EGAVPIHNFEKFFKRKIYTYNCLAGLISYCGYIKGYEVYGDAACDPDIDAVMMRLMEELN PALQDYFQITKEDQEAFTNRALAKFRDKSILDYNIKNGRAPARKLGPTERIMSPMQILLD HDKDPRIMEFVAAAALVYWDELQGKTEPKMDKDLITTFCEINSLEGNEPVVEHVKQYLYE IKKNRDNICIMQILFG >gi|312954810|gb|AENW01000052.1| GENE 6 4198 - 5388 1609 396 aa, chain - ## HITS:1 COG:mtlD KEGG:ns NR:ns ## COG: mtlD COG0246 # Protein_GI_number: 16131471 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 386 1 380 382 164 28.0 3e-40 MKAMILGAGRIGRGFVSELLHANQVEITYFDASSVMVDKLNEKKEYTIHVLGAEELNTHM EGVQAHLFYDIDALCSCWKEADFLFTACGGKNMGNVGETLAKAFKRLVEENAVHVSNIVT CENWINPAKDLKEAIVSNLNEEERKLFEENVGVSESVIMCTGTGAPDPDKVTNEMDTWVQ NMRYLPIDRDRIKGEIPQWDYVEFVTDFGDLLKQKIYTNNTSVATVSYLGKLKGLTYVAD SANDPEIEPILDQVYEEINYALIHGMGINEESQIKFSKTAKAKYTDRAIVDLVTRIARDP IRKLGPQDRFIGPMRIALSAGIRPKAIALGAAAALYFDNPEDRDALRLKEIRETKGIDYI LETISEIDPQGEIAVLIKEAIAELKAKGWIKEGASA >gi|312954810|gb|AENW01000052.1| GENE 7 5452 - 6408 1160 318 aa, chain - ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 313 1 308 317 197 35.0 2e-50 MSKGVILVTPRGYAAYGAQAAKRLEALGYEMNINTTGKPLSREAFVEYAKKSTGIIVGVD ELDGELLKECRSLKAVVKFGVGTDNIDLKTAEACGIKVGRCVGSNSNAVAELTIGMMFAA AKHLVSSNVQVRGGAWNKPTGRELTKKNIGIIGFGNIGRHVARMAHGIGMEVLAYDVFDI PKEVLDTYQAKQCSIEEILKSADFISIHTPLTEETRNMISDEQFDMMKETAVIVNAARGG IINEKALYTALKNKKIYAAASDVFTSEPPVQDDWVQELIHMDNFILTPHIGSRTVEAESN TVEMATDNLIRLLEEACG >gi|312954810|gb|AENW01000052.1| GENE 8 6410 - 7042 851 210 aa, chain - ## HITS:1 COG:SP0317 KEGG:ns NR:ns ## COG: SP0317 COG0800 # Protein_GI_number: 15900249 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 3 189 4 191 209 158 41.0 6e-39 MLAETICRIKKTGLMGIVRVETIERGIEIAQGCIDGGVDVLEISYTNNNAGEVIRALKEK FGDQLLVGAGTVLDPTTARLAIMDGAEFIIAPTFNKEVQEMANLYQIPYAPGCTSYTEMI EALKAGASFIKAFPISNYYGPDLAKVFKVPCPQIPILASGGANFDNLHTWFENGVDSVGL GGLLTKGSSADIAENARKLRAIVEESRKAD >gi|312954810|gb|AENW01000052.1| GENE 9 7053 - 7550 352 165 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVTGWMLFTGTDTKGRRLLYIKKKNAYYLLPQHREFAITLWKHAEINAISISIILGYFLF HKIAGTIALALVLYAVELLIMNKKLLPSLHRAGGKHITWRKEHRDKESGGIFPALLFLFI GIGLFLCLVFQQTVNTIETITAAAGGCIAVLMGVRTLYQAKTTGK >gi|312954810|gb|AENW01000052.1| GENE 10 7570 - 7983 664 137 aa, chain - ## HITS:1 COG:lin0143_1 KEGG:ns NR:ns ## COG: lin0143_1 COG2893 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Listeria innocua # 1 112 1 109 156 77 38.0 6e-15 MIKILIVTHGPLAQALKESSAMFFGSMSNDVETIGLYPTDNPEDLKEAICEKVEAIDTGD GVLVLVDIFAGSPFNMTALAIDELKEAHKLQCYTGVNMPFLMEALSSCNSMELDQLTTHL ADIGRDTIVNLRKALDI >gi|312954810|gb|AENW01000052.1| GENE 11 8148 - 8972 1096 274 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 3 266 17 279 286 142 33.0 7e-34 MAEKHSLTKRDVQKTAFFWHMTSHMTYNYQRLQAGCLAWIMGPIFEKLYPNDHDKMVEGL ERHMLYFNTEPRWGAVLPGMVVALEEGLANDDSGEMDASIIAEIKTALMGPLAGIGDTVW AGLIKPIILSVTLGWAMQGYVWGAWAYGIGVTLLDFAVTYFMFMRGYQLGMDSIDRFLES GFVKKITTFLGIVGLFCLGAMIVKYVSIGAVLEIEMKTGTLNLGEIMNKIFPCFLPLVTT LFAYWLQVKGKKITTVLIVLFVIGFIGGAVELLG >gi|312954810|gb|AENW01000052.1| GENE 12 8975 - 9727 1002 250 aa, chain - ## HITS:1 COG:FN0630 KEGG:ns NR:ns ## COG: FN0630 COG3715 # Protein_GI_number: 19703965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Fusobacterium nucleatum # 1 238 1 237 259 114 34.0 2e-25 MVQALLMGLLALLNGIQGPYHWYFFREPVMAGFWVGLIYGDPVQGTIIGATINVSYMGWI SAGGANASDLYWAGLLGTFVAIQGGMSIDTSVAFAVPIGLLGNYVHVAYMTIASLWPVKM DALAAKGNWRGIRRIQFLGGPAIVLVLRALPVFLIALYGSEFIQTMINSIPTWAMNGLAA VGKMLPALGMSMLMKFMYKKALLPFFVLGFGIAAYSGMTDLLLYALVGVCLAVILIKIGF NNDTEQEGAE >gi|312954810|gb|AENW01000052.1| GENE 13 9838 - 10323 583 161 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 120 37.0 9e-28 MENLKLTRIDFRLIHGQVMTRWVAKYEIESIVVIDDRSAKSPILKKILLGAAPSGVKVLV WNVAEAAEKWKAQEFPKNNLLILFKNTSQAKAAWEAGVKFPSLQVGGIEGSGDKKNIYKN VVMSKTEAEELNVLYQGGVDIFMQPIPEDNPYPFKDALAKF >gi|312954810|gb|AENW01000052.1| GENE 14 10354 - 11010 827 218 aa, chain - ## HITS:1 COG:TM0066 KEGG:ns NR:ns ## COG: TM0066 COG0800 # Protein_GI_number: 15642841 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Thermotoga maritima # 11 213 8 198 205 111 34.0 1e-24 MSRQETIQKIEEEKIVVITRGIYGDDLMKLADALFQGGIRCFEITYDPSDPDTCTKVKEN IQALHAQFGDELYLGIGTVLTKEQVHNAKEAGARFIVSPNFDEEIVKETLALDMVSMPGC MSPTEIVAADKAGVDFIKLFPAGTLGIKYCKDIYAPLHHVKYIATVGVTEETFVQYLRLG FTGAGISSQLVDKKCREEGNYAELTRRAKRFVELAKQS >gi|312954810|gb|AENW01000052.1| GENE 15 11024 - 12007 988 327 aa, chain - ## HITS:1 COG:mll1021 KEGG:ns NR:ns ## COG: mll1021 COG0111 # Protein_GI_number: 13471134 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Mesorhizobium loti # 72 325 79 326 341 180 37.0 4e-45 MKKTAVINITSFGREFPQHLQELEEKVGPVDKMLLPADMDGRTLAQKLKGYTYIVLGNYP TFDETFFSNNCDVKLIARHGIGFNNVDLESSKKHGVYVTHIQNYVELDAVAEQAAALLMA VSKNVVTANHKVHQGDWNRDRQEIMGFQLRGKTCGVIGCGHIGTRFAQIMKYGFQNRILA YDPYADKEKVMAEGIQLCDLDTLLKESDFISLHASLDEKSKHLINAQTLAKMKDNTILIN TGRGGLVDETALLEALRNGHLFGYGADVAVHEPMQADDPLLACERVTITPHSAIYNYTCM KNMNRKVMEDIYCMERGERPVEIINGL >gi|312954810|gb|AENW01000052.1| GENE 16 12580 - 12843 135 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNIPIGSWKKHNDYAWFTGHGNSFHTPIVDEIELHKIAVLTDKKRPFYLTWNIAYPKED FVEFNYIVRGDDEENRILLFIVLIKRL >gi|312954810|gb|AENW01000052.1| GENE 17 14007 - 14960 959 317 aa, chain - ## HITS:1 COG:CAC2945 KEGG:ns NR:ns ## COG: CAC2945 COG1052 # Protein_GI_number: 15896198 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 3 310 1 316 324 337 50.0 1e-92 MYMKLVVLDGYTENPGDLDWRGMEALGDLTVYARTDHSQVKERMQDADAVIINKVPMTRE LMQESKQLRYIGVLATGYDVVDIEAASDLHIAVTNVPGYGTDTVAQYAIALLLEVTSRIG HHAKRVKEGEWANNADWCFWDYPLMELSGRTMGIIGFGRIGRKVAEIAQALGMHVLFHDA HADNDTHAEKVSLEELLRRSDVVSLHCPLTKENDSLINKATLAMMKSNAILINNARGKLI NEYDLAQALQNGTIYAAALDVVREEPIRNDNPLLECDNCLITPHISWASKEARRRIMDTA VENLRCFLQGKEQNRIV >gi|312954810|gb|AENW01000052.1| GENE 18 15020 - 16174 943 384 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 383 1 388 389 404 48.0 1e-112 MENFIYDIPTKVYFGKGQLQQLHTVMKEFGERVLLVYGGGSIRRNGIYDEAVTELHTAGK KYVELFGVEPNPSLTTVEKGVALCRRENVDVIVAIGGGSVIDCAKVVSAAVCSTLSPWEL VLHPQEIKKAIPVIAVLTIAATGSEMDHIAVITNPDTKEKIGTRNPLLRPRAAILDPTFT FSVNRYQSACGVADIMSHTMESYFAREDAGLQNRFAEGILKICTAYGPLVLKEPDNYEAR ANLMWAASWAINDMLKLGHMTQWSVHPMEHPLSAFYSVTHGEGLAVLTPHWMEYVLSEDT VDMFARFAREIWQVTEKDPWDMAREGIECLRSFYKQLHLRSSLGELGIDDTHFDAMAQDA AKQTVNGFVSLSAEDVKNIYRNSL >gi|312954810|gb|AENW01000052.1| GENE 19 16178 - 16885 676 235 aa, chain - ## HITS:1 COG:no KEGG:Plim_3793 NR:ns ## KEGG: Plim_3793 # Name: not_defined # Def: demethylmenaquinone methyltransferase-like protein # Organism: P.limnophilus # Pathway: not_defined # 7 210 10 204 243 92 29.0 9e-18 MKIDDRLEKLKQFDTPSITNVVATYPDKEYCLGLYHPWRGQWYTDERARVMYPELGRTVG YAVTCTYGLPDPNYECLKFADVLKAVAAVGKPVVLIVKQDMPEEIKCRNGLLGGNMMTAL RSAGCVGVISDGPSRDVDEIRPLQMQYVLSGVTAGHGKWAVQSVNTGVEVFGMQVSPGEI IHMDENGAVKFPASVIDQVIEKAEYLQEFEENRQRRMRETEDVDELIKIMSGFYD >gi|312954810|gb|AENW01000052.1| GENE 20 16957 - 17883 1126 308 aa, chain - ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 303 5 309 317 198 36.0 1e-50 MKVLVTSKSFGKLSRKPIQRLQDAGFEVYGNEKGRLLNEEEMVEAIQGMDAVILGTEVFN RNVIDHADKLKIVSRYGVGLDKIDVEYLKEKGIALQIARNANTNSVADHTIGLMLSLCHN ITRSDANIRSHVWKKPIAKDLYQSTVGILGLGAIGKAVARRLKGFDCHILAFDSYYDEAF IREYGIRKADINEIVSSSDFLTLHLPALAEFSPLLDAKAFSKMKKDAVIINTARAKLIDR QALYDALHNGQLYGYGSDVHYMEPGFDEELIACENTVLTPHIAASSEGAINRMSDIAVDH VLAYFGCQ >gi|312954810|gb|AENW01000052.1| GENE 21 18094 - 18921 1097 275 aa, chain - ## HITS:1 COG:lin2238 KEGG:ns NR:ns ## COG: lin2238 COG0191 # Protein_GI_number: 16801303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Listeria innocua # 1 270 1 277 299 194 40.0 1e-49 MLVTLKEILTKAKQENYAVPACNIDNEHNLRAAIEAAEEMNTGIILNTTPVANPDLESFG RIAVDLARRSRVKIALNLDHGKTFEDCLLGIRAGYTSIMIDRSLLPFEENIREVQEMVRI CHALGISVEAELGHVGVGEQYHTDGHQAFTRVEEAVEYVKQTGVDALAVAIGTAHGVYKG TPQIHFDLLHELKDALDIPLVLHGGSGTGDENLARCAREGINKINLSNDLKRSAIENLVK EDLSGNAVYQLYPLLAEGFKHKIKHYIRLFGCEGK >gi|312954810|gb|AENW01000052.1| GENE 22 18923 - 19978 1101 351 aa, chain - ## HITS:1 COG:BH0189 KEGG:ns NR:ns ## COG: BH0189 COG1063 # Protein_GI_number: 15612752 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Bacillus halodurans # 15 338 14 332 343 146 29.0 5e-35 MEKARAWVIEAKDKLAMRELDILEPGDYEVLFKTEVCSLCTVDRRTYKGTRNYGYPFLGG HECSGTIIKTGRGVVGVKAGDKAIFTSGYCNQCELDRSGRGTQCNRKKEMPKRSSLDGNI LGGGLSEYLVIPAWQIIRMPHDVDMRHAALTEPLACCIHSIRKARLKFGDTVVIIGMGIM GYFHVKLAQMCGARIIVSKTDEEKRKTAIREGAAYAFDPRQCDVGEEIRRLTDGLGADAV INTIPFKEVWQQAIDMLAPYGRLIAYSSQNSKEPIGVDFGMVHSREIEFIGTLNPTIEDN QMAVKLIGYQMIDMEKVIDREFSFAQGKEAFDYACKPGVYRVMINYGKEDN >gi|312954810|gb|AENW01000052.1| GENE 23 20317 - 22701 2410 794 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0952 NR:ns ## KEGG: Sterm_0952 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 5 780 4 774 780 306 26.0 2e-81 MAKTRRDLIMNLVREYTSESLADKSFSFERCNAFDIALDLKLDRSNVSRILNQLFNDLQL IKVEGRPTLYLSKDVIVGEYHFNNIPQIIPGKENLKNLFVYDASDASFYKKGMNIIGNGY EESLTPVISKITPAIFYYQNKPLLIALQGEKGSGKKYFCKKLFDLAVQNKRISKKSRSFT FDYRSINESFSTLRQQFLDRNISMVIMEIYTPFQESEIYRFWNDLNNLCSNENKPLPIMI FLIDKSVENFAYFSQLTPYTAKYPNVKERTTKEMIELVLTFLQEEAVNLNCRIKVTGNAI ASFLSADYTYNLFQLRNEIVYSLSNNLYSSVITNHEPIVITHENISKNVIQNKSADNSLE DHIRITVTQLLPEIIDIYPDQPCETLENLLQTQLNASIVITAQLKNIIEKAKEDVLMTRT KLLDSSSIEMQSKVYQALTPLFTKTKLKNDRQILSKLYIQIQHMLDNTFAYQFQLEHLDY KETAYSQELSDNVISTVENKFNISLLKVYKSYIRNFIYYALKSISQNTIMTLIVCHGERL AENYAQHLNQILGSRCFFSFDYNLYYQTHDFHEFTDKIYKLIKYIDIGKGVLIVGDKPPL TTLDKSIISTLNIPSFSLYPVSLPLLYETSEVVSQKTMHLLALLSDVVNRKKKIKAFLND KSLTSKNERQSSDIFQRFQATFPTINIAKSNEALYRVLLNICTECNLPLSNNIIIQFLFH GTCMLDRCVKKQKIRYNLLESFMMEHTELFHIMKTNLLKIRDFMTLSISQEEIAVLCDVI LNYQMEINVQTERK >gi|312954810|gb|AENW01000052.1| GENE 24 22970 - 23617 780 215 aa, chain + ## HITS:1 COG:SMb20367 KEGG:ns NR:ns ## COG: SMb20367 COG1309 # Protein_GI_number: 16264101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 1 161 1 165 230 69 29.0 5e-12 MPRNKYPEETVQKILDVSMKLFLEKGYEETTILDIVGELGGLTRGAFYHHFKSKEEVLDA LSDRMFLEHNPFEEVRKEKGLSGLEKLKKIIKMQAQNQDQLDLNQMSVPLLKNPKILADY MESNLRIVTPFFEELFLEGIQDGSIPDIKYPKALASLFVMITSVWFIPSIVPCTQEDLLE RLLLTKHMLDSMGIYLIDDEILQHAQTIVQSIPTK >gi|312954810|gb|AENW01000052.1| GENE 25 23688 - 24629 367 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 7 308 4 304 311 145 31 7e-34 MNTQDLAVSVHRLTKRYGHTEVLKDVNMEIEKGSIYCLLGSNGAGKTTTIKILTTLAAFD SGEVSVCGHSVTAEGEAVRKLISLTGQFASVDEKLSGYENLVMIGKLNHLKTPKKKAGEL LAYFSLTEAANRMVSTYSGGMRRKLDIAMSLAGNPQIIFLDEPTTGLDPQSRHSMWSIIK QLNSMGITIFLTTQYLEEAEQLADHIAILDQGRILTEGTPAELKKLLPQGIVEFEFPDSS MLEAAMSCTGGYSTKPVMTEHKLIIYTDGSAEALSELFHIFSSGNIKILKFYQKLPNLED VFLTLVHEREDIQ >gi|312954810|gb|AENW01000052.1| GENE 26 24626 - 25396 665 256 aa, chain + ## HITS:1 COG:lin0979 KEGG:ns NR:ns ## COG: lin0979 COG0842 # Protein_GI_number: 16800048 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 4 252 1 248 250 195 42.0 9e-50 MKTIQTLKDVLTMSGRCLLLSKRNPDTILTSIIAPILTMLLFAYVIGGAMQTGETSYVNF IVPGIILQCLGQCAATTAIAVCSDIKSGIMERFCTMPVKRSSILNGHVREAFIRNMVTAL LILLVAFLIGFRPEADLLGWCAALLIISLYILTLSWISVYFGMIANSPEGAGSFSILAIA LPCISSGFVPIDTMPKALQIFAEYQPITPVIDSLRALLLNESLKTCTLLSAILWCTVLLL LFYILSVRAFKKKSNH >gi|312954810|gb|AENW01000052.1| GENE 27 25685 - 25780 92 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGMIIDIMKFLLLVYIALELRDISAKLSNK >gi|312954810|gb|AENW01000052.1| GENE 28 26237 - 26332 98 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGMIIDIMKFLLLVYIALELRDISAKLSNK >gi|312954810|gb|AENW01000052.1| GENE 29 26693 - 27739 934 348 aa, chain - ## HITS:1 COG:CAC0157 KEGG:ns NR:ns ## COG: CAC0157 COG0246 # Protein_GI_number: 15893452 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Clostridium acetobutylicum # 3 293 2 312 384 92 27.0 1e-18 MSKNVIIGAGLSGRGYLNRLLYLSKEETVFLDRDESLIRQLRKEPSYTIRFGSEREPLKV DNYTAYTITDERAITNIAQAERIFICVGADHVAELLPFLQAALQERDRRSLDILVAENGI QPSSPLAVLRSDSRIHLSEAVIFCTTLGQRDSLAIFSENLDHLPYDSIALGHELPLYGFV QETHFSDLLERKIYTYNCISACIAYLGYEKGYTDYAEAANDIEITEKIKRIAEVINRCIT TVYNVSMQEQTAFSEMAIRKFQNRNIKDTVARNVRDVERKLKPEERIRKPLSLMQEQGEY SRELLEVLAAALRYGMKTKELSQDWDKLVDFYTQGMCEEWKQVLHRCK >gi|312954810|gb|AENW01000052.1| GENE 30 27732 - 28910 1602 392 aa, chain - ## HITS:1 COG:YPO4067 KEGG:ns NR:ns ## COG: YPO4067 COG0246 # Protein_GI_number: 16124181 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Yersinia pestis # 1 365 1 364 387 178 31.0 2e-44 MKAIVFGAGKIARGFIGQLLYLSKADITFVDIDQQLVDRLNKDQKYHVYILGDSSLDSDV TGFQAVQLEDEKRIGAALVEADIAFVSVGGANLKSLGEKIGRIYKENGIPKKPFNFVTCE NWRHAGAFLYEGITAEMEEQEKTMFDQFVGVNEAVIMRSATQPSDELAMQDATGVWVQNY WYLPISAEHFKGELPPIQDAELMQNFGDFLTQKMYTNNTSNAVIAYHGYLAGYELLAEAA NSPEVSALLDEVYEEINQTLVAELHVDPQQQKAFAEKARAKYTDWTIVDRVIRHGKDPLR KLGAQDRLIAPARMALNHGVYPRVIIETIAKALFFDEESDASARKLKAMRREHGIPYVLQ TVCELNEQEPLYREVLKAVERICKEGMVKGHE >gi|312954810|gb|AENW01000052.1| GENE 31 29048 - 29695 598 215 aa, chain - ## HITS:1 COG:TM0066 KEGG:ns NR:ns ## COG: TM0066 COG0800 # Protein_GI_number: 15642841 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Thermotoga maritima # 6 215 5 203 205 116 32.0 2e-26 MNEIVEFIAKHKVVVICRGLYDNELIKTIRALYDGGIRVVEVTFDQADPDAVEKTCGAIR TIKEHFPQMKVGSGTVTCVKHVLATKKAGGEFCLSPDVNTEVIRATKEAGLISIPGAMTS TEILQAHNAGADIVKIFPAGWLGLSYLKDIKGPINHVKFLAAAGVNEENFKEYLNAGYCA AGISGRFIDRKVIAEGNFEELTRRARIFTDIANAC >gi|312954810|gb|AENW01000052.1| GENE 32 29757 - 30230 686 157 aa, chain - ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 1 157 6 160 162 106 37.0 1e-23 MKHIVWTRIDDRLIHGQVMTQWIQYTEANEVLIIDDGVAKDSFLQMVMKSSVPGKISLKV LSVKDAIGYLNEDGKHEKIIILVKTPVVLDELSDAGVRLKSINVGGIGAKAGRKPMFKNI SVSEEEKEAFRNLLNKGINVFLRVIVTEPEEDIAKYL >gi|312954810|gb|AENW01000052.1| GENE 33 30246 - 31175 914 309 aa, chain - ## HITS:1 COG:MJ1018 KEGG:ns NR:ns ## COG: MJ1018 COG0111 # Protein_GI_number: 15669207 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanococcus jannaschii # 37 289 30 286 524 189 40.0 5e-48 MKVLITSNSFGKFDEAPRKRMLDLGWELLDNRYHHIMSEEEMMNEVPGVDAIILGSDIVS KRVLDKADKLKIISRYGVGIDNIDTAEAEKRGIAVTVTKNCNTEAVADYTIALMLATLRH VCNVHSSLQKGIWKKETGMDLCHKTVGVFGLGAIGRQVVKRLKGFECKILGYDIFADEEY CEKEGICLLSPQEIFKQADIITLHVPGNADGTHFITQQELELMKPEAVLINTARASLIDE TAMVQALRQKRIYGYGTDVFDGEPHMNPEFIGLNNVVCSPHTAAVSVEAVNTMSHAAVEH LMEYFGVTK >gi|312954810|gb|AENW01000052.1| GENE 34 31189 - 32016 1133 275 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 1 275 7 286 286 165 35.0 1e-40 MSEQVTERKLTIKDLNTSYFMFEVFAQACCSYERLQAPGFFSGMKNVIAKLYTDPEERAE ACQRHMEFYNSEFALVGPVILGLTIAMEEEKACGAEIDGLAISAVKTSLMGPLAGIGDTL RQGTLIPIIGSIAISIGQEGNLLGPIFYFFVTLALNFGISYTLYRKAYDKGRDFVGEFFS GGKMEKIMTMVTAMGSITIGALAATTVKLTSTAEIALGDNKLAVQTDILDKVVNNLLPFG MVMLTFYLMNKKVSVNKVLLILFAIGIIGGLLGIV >gi|312954810|gb|AENW01000052.1| GENE 35 32013 - 32780 1022 255 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 30 242 26 238 249 99 29.0 5e-21 MQISIIQAILIGTLYYLTNNGVPWLTGLGSVSIRQPICAGTIVGLILGKPVEGCIMGATI NTLYLGFVNAGGTLPTDPGIGGVVGTALALSANATPQVAMSIAVPLGVMGTMVWTLRQTV NIYFVHQMDKYAVTGDIKKMAFWQLVPTQLFGYAVTMIPCALLVYFGAPATQGLLDMLAG KPLHILSVIGGILPAIGIAMIIRMLNTRNGILIFFTLGFFLETYSGLSMLVVSIFAAIAA YFYGELKFGKAGNEE >gi|312954810|gb|AENW01000052.1| GENE 36 32806 - 33225 504 139 aa, chain - ## HITS:1 COG:AGc50 KEGG:ns NR:ns ## COG: AGc50 COG2893 # Protein_GI_number: 15887389 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 126 1 119 133 72 34.0 2e-13 MVAVLLVTHGDLAQALLSSAALIMGEAALIESHGLYHGDSVDNLKDTIKEAIIRLSECSQ GDGVLILTDLFGGSPSNAAARAMHELQDSVHCECITGVNLPILLEVATSKTFMKLEELKQ HALEVGGNSILDLRNQFQL >gi|312954810|gb|AENW01000052.1| GENE 37 33564 - 35987 2464 807 aa, chain + ## HITS:1 COG:lin1832_1 KEGG:ns NR:ns ## COG: lin1832_1 COG1221 # Protein_GI_number: 16800899 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 1 425 1 395 432 147 26.0 6e-35 MDKKKEEVYQHLIRHTAKQLQQRGSLGRDALNISLDLQMDRSNVSRLLNQLHHEGRLIKT QGRPTLFFARTPLENEHPDVHIPSVIPKGKSIQSYLKEEQELKNEQTQADVFRQYLANRN TSSMFEPIQRAKSALLYPPQGLNILLYGDPCVGKLNFAKTMFEFCLQRKIFTHGSRIVVF DCLNYADQEPEEILSKLYGYYDGSHLKKGLLEASRNGMLILNHMDRLSFSALTSLYNSMI SQSYTPLHLPSKEYPIRSLIVGISNTENMILNPDIRRCFPMQIHIPCLREKSIQEMLVLT MQYFQQEAAHINKTIRISKGALSCFVMSDYSGNLPHLHAEIKQACAHAFRSYLEQEALFV SIDYDDISTQVLTDIYDVNERMSELDNILNLFAGEYLFFSALKQNQELELLYDLNDGTSK KDSYLDSIDDKLINLCIQDINAAIGIHLNTIRSVMLKQVYDLLYPILQNNPICKNENLLY GLLLHVSNSISRIRSGNQELGFRRAEYRIAKQEDYDCAQSIVSHIHAHQELQLPAEETDY IATYLYLSSQWIDSNYIQLLIISVDNDTAKEYADYLNSLSFKTEIHYLRLHSQTSHEKNC RLIADTMHSINRGKGVVIATDSSTVTASEAMLKKLSDAAFTIVSDISVKTLMAIVEKMES LGSTLSSIQYFRQENTRDAASVSETETHAQELLNDITNKVLSESLVFLNPHKVCQSLFNV LINILHDLNISYTDDLLIKFIFHSGFMIERCIRKEPLSYPKARGIINQYDQMYYIMEKNF EIISEIFNVTIPSSEMAMIMEIFLPYM >gi|312954810|gb|AENW01000052.1| GENE 38 36186 - 36455 271 89 aa, chain - ## HITS:1 COG:no KEGG:TDE1954 NR:ns ## KEGG: TDE1954 # Name: not_defined # Def: prevent-host-death family protein # Organism: T.denticola # Pathway: not_defined # 1 83 1 84 84 86 58.0 2e-16 MIQIRPVSDLRNKFSEIEEIVNGGEPVYLTKNGYSTMVVMSLERYASLTDVGETKLDEAD RIAETSEERYSLERVFGDIRKAVDGNEDL >gi|312954810|gb|AENW01000052.1| GENE 39 36515 - 37219 876 234 aa, chain - ## HITS:1 COG:ZagaIm KEGG:ns NR:ns ## COG: ZagaIm COG0363 # Protein_GI_number: 15804981 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli O157:H7 EDL933 # 3 229 22 250 251 182 38.0 5e-46 MKLIHTENYEAMSKEAADLLLDTLRKKPDAVICLATGSSPARMYELVCEAVNRERIDLSE ITFVKLDEWYGVEPQAACTCTTFIREHLLDQLYMQPKAVVEFVSDAADIRQELDRMDVFL SEHPIDVMILGLGMNGHLGLNEPADFLTLNAHYAELDEKTKTHDMVKGYEPKGGLTIGLQ GIFTSGQIIMLVCGDRKEAAYQAFMSQRIATSTPASLLWLHPNCVTLVDDTIQK >gi|312954810|gb|AENW01000052.1| GENE 40 37287 - 38084 1066 265 aa, chain - ## HITS:1 COG:agaD KEGG:ns NR:ns ## COG: agaD COG3716 # Protein_GI_number: 16131032 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli K12 # 6 265 4 263 263 333 65.0 2e-91 MSASKKLTKHDITMLGIRSSFLQASFNYERMQACGFTWAMLPALEKVYGDDKEKLSAAMT DNLEFINTHPNLVGFLMGLMMSLEEGGGTRDAIKGLKLALFGPIAGIGDAIFWFTILPIV AGISCSFASQGSVLGPIIFFATYVVIWILRIVWTRLGYTLGTRSIDIITENSDMIANSAT ILGITVIGALIASYVTINLLPVIKVDGGIEVAVQAEFFDRIFPNFLPMCVTLLLFWLLKK KQANPIVLIVSIIVLSILGAWIGLV >gi|312954810|gb|AENW01000052.1| GENE 41 38071 - 38874 942 267 aa, chain - ## HITS:1 COG:agaC KEGG:ns NR:ns ## COG: agaC COG3715 # Protein_GI_number: 16131031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli K12 # 2 246 3 247 267 290 63.0 2e-78 MEITLLQGILLTIMTIIVGLDFFLEAFFIFRPLIVSTLTGLILGDITLGLKVGALIELAF AGLTPAGGTQPPNPVFAGLMGTVLAYTTGCDPKAALGLCLPFSFLGQYVILFYYSAFSFF MGKADKCAAEADVKGIRRINFTTMTIISLTYGALAFLCTYVAQQPMADFVNALPAVITHG LEVAGGILPAVGFAMLLRVMMKVKYTPYFIAGFLMACFCEMPNLLPVALLGTVFALIDFF GVKQRKDEIEEAVKNAGITGGDTNVGI >gi|312954810|gb|AENW01000052.1| GENE 42 38903 - 39370 604 155 aa, chain - ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 2 154 4 156 158 211 67.0 5e-55 MPNILLTRIDNRLVHGQVGVTWTKTLGANLIVVADDTAAEDRIQQSLMSVTAKSSGVGIR FFTIEKTAAIIGRAAPEQKIFIVCRTPKDVRRLVEAGVALKEVNVGNMHFSEGKRAMTKK VYVDDEDMDDLKYLVSKGINVYAQDVPGDPKSAIE >gi|312954810|gb|AENW01000052.1| GENE 43 39445 - 42177 3292 910 aa, chain - ## HITS:1 COG:STM4534_1 KEGG:ns NR:ns ## COG: STM4534_1 COG1221 # Protein_GI_number: 16767778 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 24 365 26 370 460 282 43.0 2e-75 MKEIVFEELKKRCEEYAIEEHTRFTAVSIADALHISRNTVSQYLNERVKTGDVIKINSRP VYFFVREAVENKWSGVVTKCTFDSFEQLAQELVGDAQDFEQLIGCNNSLSSVVEHCKAAV SYPGGLPILINGPTGTGKSMIASMMYEYAVNQNIIGKNKKFVAVNCSEYANNPELLTTNL FGNVKGAYTGADEDNPGLISLADGGLLFLDEVHCLKAECQEKLFFFMDKGMYHKVGDNEN WYYSKCRLVFATTEDPQNVLLKTLLRRIPITITVPALKDRPLIEKRELIYTIFTKESKRL GKEILISNLAYQSLMDFEFIGNVGALKNAIKAACANSFLVHQGEPKLKIQVADLPDYIFP SLTSVQLKSSTHGMQEAMIPIERLKGSLNQASPLLHLYSQLVTQYEGYQTSTNAFPAYME KTGILIQSYIDYVMFHNRYQKNTSEAYLLKLLDKIYSIVMNKYSINIPNNEIKIYSRILV EYSKCATDANVWISAHQKTVKALVEEVQERMPRIFHIAEEIVENVRLNLDLELDELLLVI IAIAFAGYQNEEVSSCVGVILCHGYSTASSIADTANRMLGQYVFDGIDMEINITIDKVAQ LADDYLKRKGTIHELIFLVDMGSLEEIYTRIKPMSDYNIALINNVSTAMALEVGNYIMQG KRVEEILQLVKENHQLSTHYLKSRKKKSAILSICATGFGAAKKISELLEGSLPRKIDLEI IPYNYQQLVENGNRDSIFNRYQVELIVGTLDPKVSGIPFMAIESVMMNDEIGVLEQLMQR YLGAVDLEAFNQNITKNFTLSNIVNHLTILNGEKIIDDVEEIVENLEEDLNEELDATRKV GLYVHISCLIERLILKQGIEHVEGMEKAVEGKKDRVDKVKDAFSGVEMRYSVELPAPEAL YVLNYFKNPK >gi|312954810|gb|AENW01000052.1| GENE 44 42234 - 42737 594 167 aa, chain - ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 5 157 6 158 158 129 45.0 3e-30 MKARIELTRIDNRLVHGQVGLTWGSTLNIDTIVVVDNLTAASSFAQKLMQSVASAASRQI RFYTVHDFIRAYNDNTSHQKLFVVVQSPHEARLLVEAGIELKRVNVGNMHYEKGRVAFNR KVYLTQPDIEDINYMISQGTEVFYQDVPGSAVEKFSELDYETMKRRR >gi|312954810|gb|AENW01000052.1| GENE 45 43110 - 44549 1707 479 aa, chain - ## HITS:1 COG:SP1124 KEGG:ns NR:ns ## COG: SP1124 COG0297 # Protein_GI_number: 15900991 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 477 2 475 477 416 42.0 1e-116 MARILMVAAEGLPFIKSGGLADVIGSLPNELAKKGHEVRVIMPLYLKIAQKFHHEFTLEA QFSVSIAYHEVPVNIWSTMRKDVKFYFVEHKGYFEREEMYGHIDDGERFAYFQKAVIEMC NQLNYFPEIMHCHDWHTGMIPAMCKEGHSFDERYRNIRFVYTIHNLAYQGNFGVEMLDSC LGLDYRIYDNGNVRYDGGISFMKSGILYADKVTTVSPTYSQEILTPQYGEHLEMVLNIRK YDLWGITNGIDIEYWDPKNDPEIPYHYNKVNVKKAKGLNKEALQKELGLNVDQNVLLIGV VSRLTWQKGFYLMMEKLSEICAMPIQLAVLGSGEASIEEKMAQLEAGNKGKIAFYKGYND SLAHRIYGACDLFLMPSLFEPCGISQLISMRYGTLPLVRETGGLKDTVTPYNEFEKTGNG FSFANYNSDEMLQVMYNAIDVYYNRKEDWKILVRNAMNTDVSWAKSAETYCQLYGQLHS >gi|312954810|gb|AENW01000052.1| GENE 46 44549 - 45664 1334 371 aa, chain - ## HITS:1 COG:BH1086 KEGG:ns NR:ns ## COG: BH1086 COG0448 # Protein_GI_number: 15613649 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Bacillus halodurans # 1 367 1 364 368 213 31.0 3e-55 MCNAIGIVNYEGPNVQVKGMQDYRPVSAFSFLGRYRLVDFPISNLSNSGVNHIKVFVKTN PRSLLEHLGTGRHYNINSKRGKLHILPAKSMDENDFYSNDINSYMYNMQAIEDANYPYVV LTPSHFVFRQDFSALLDTHIESGADITMLYQNVDNAKESFVNCDVVNLNKQKGVLSLEKN RGNSKSRTISLETYILSKELFMDLVKKAANISSLYWFRDIVNDECAELDIRGVAHRGFVA CINDFKSYYNANMDLLDYDKAMDLFHTDWPVYTRTNDSCPTQYYAGVSVKNSMVSNGCLV EGDIENSVIGRGAIIKKGAVVKNCVILPGAMIGEDVHIENVVVDKKARIVRKKELLGLAD TPLYVKRNDKI >gi|312954810|gb|AENW01000052.1| GENE 47 45666 - 46802 1197 378 aa, chain - ## HITS:1 COG:BH1087 KEGG:ns NR:ns ## COG: BH1087 COG0448 # Protein_GI_number: 15613650 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Bacillus halodurans # 3 373 2 371 383 424 55.0 1e-118 MRQNNMLAMILAGGRGTRLYALTKKIAKPAVYYGGKYRIIDFPLSNCANSNINVVGVLTQ YESVLLNSYAAAGQRWGLDAKDSGVYVLPPREKDGAAFDVYRGTADAISQNIDFIDSHNP EYVLILSGDHIYKMDYSKMLSHHKACDADATIAVLPVPMKEASRFGIMNTDETDRIVEFE EKPEHPKSNLASMGIYIFNWKQLRKMLVADMDDPNSNHDFGKDIIPAMLAENKRLYAWKF KGYWKDVGTVDSLWEANMDLLSKNNELDLNDPNWKIYTEDVATVPHYIGPNGKVDNAYIN QGCVIDGEINNSVLFTNVEVSKNAKVNDSVLLPDVEVGEGAVIHRAIVMQGVKIDAGAVV GDPNSEEIELISKRVRGE >gi|312954810|gb|AENW01000052.1| GENE 48 47086 - 47841 229 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 229 1 219 245 92 30 7e-18 MLDLKDISVTFHANTVNERKALDHLSFHVEDGDFISVLGTNGAGKSTLLNVISGTIPCDS GTILLDGKDITAYPEYKRAREIGRLFQDPLKGTAPHMTIEENLGLAYSRGKRTTLSRAIK KGDRSFFIEKLKELGLGLEDRISTTVGLLSGGQRQALTLLMSTIVTPKLLLLDEHTAALD PKTAASVMDITERIVKENHITTLMITHNMKQALEYGNKTIILNEGKIVKVLEGEERKNTT VDDLLNMYDFV >gi|312954810|gb|AENW01000052.1| GENE 49 47834 - 48706 1171 290 aa, chain - ## HITS:1 COG:RSc1739 KEGG:ns NR:ns ## COG: RSc1739 COG4120 # Protein_GI_number: 17546458 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 1 287 1 292 303 199 48.0 6e-51 MALSTIQDAVILGMIFSIMSLGVFISFRVLNIPDLTIDGSFTTGCAVSAVFAMNAHPFIG TLMAFLAGGLAGLVTGLLQTKCKVQSLLAGILTMTALYSVNLKILNGMPNVSLFGKKTIF TPLEAVLGDHAYGVMIAGLLILLILLLYLFLKTQLGMSLRATGDNEAMVRASSINSDLMK IMGIALANALVALGGAVFAQNQGFADVSGGIGMMVVGLASIIVGEAFIRRKTLGFQFAAV VVGAIVYRFILTVALQLGIGASDLNLFSAALVALAISLPHLKKRRRGTHA >gi|312954810|gb|AENW01000052.1| GENE 50 48958 - 49947 1295 329 aa, chain - ## HITS:1 COG:VC1101 KEGG:ns NR:ns ## COG: VC1101 COG2984 # Protein_GI_number: 15641114 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Vibrio cholerae # 9 320 3 313 321 206 39.0 6e-53 MKKLCKAAAAFLLCAGVLTGCGSKEDTKTEKKIPVVSVAQIVEHKSLNTIRDSFKAEMEA LGYKDGENIKLDFKDAGGQQNTLNSIMSTFAGNKSDVIVAIATPTAMAAAKYSKDIPIVF SAVSDPVGAGLMDDLKKPNNNITGTSDEIQVDQILDLALKVDPNLKTLGFIYNSSEANSV SNLAKAKEFCKKHDIKLVEGSGANITEIQSAVSVLTDKCDAIFAPNDNTVASSMSALVET ANKKKVPVYTGADSMVSDGGFATVGIDYTELGKETARMTDKILKGEDVENLPVKVFKDNL NIYVNEKTMETLGIQLPKDVENSKNLVMM >gi|312954810|gb|AENW01000052.1| GENE 51 50381 - 50578 70 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALLSPTHHHLPARQAVGFCECRHYIGKHIHLITQRRCSCKQTDAVPVNGENIFRIKNVK FQKKC >gi|312954810|gb|AENW01000052.1| GENE 52 50590 - 51321 751 243 aa, chain - ## HITS:1 COG:PM1941 KEGG:ns NR:ns ## COG: PM1941 COG0789 # Protein_GI_number: 15603806 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pasteurella multocida # 3 97 7 108 132 59 32.0 5e-09 MLLKEVMEKSGLSRKAVQYYEDQGFVKPVKLENGYRDYDEDCLKTLRDIHAMRQMGLHIK EIRAILIEEEYAPQVYEQLIHELDMQMVRLQSQRTVLRKRMHHEEAEMEYTNEMCPYVYI RKPSLLLGVIQCMLGATGFLLFPWLPGTTNLWLIALLLVFILQLIQNMYYDTRIHGLQYM EIGWKQLGLTAVLAFICGILTAISCKEAYMQQSGAVFCITAVTAILQLWSGFHLYGNSQG EHG >gi|312954810|gb|AENW01000052.1| GENE 53 51698 - 52972 956 424 aa, chain - ## HITS:1 COG:lin2515 KEGG:ns NR:ns ## COG: lin2515 COG0642 # Protein_GI_number: 16801577 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 182 423 128 378 380 110 26.0 6e-24 MKKYNILILSCFLLYLGIAAFLGWSILQMEETMDHAYRVEINRILQQVEKGTKAEDIARN SYPHIEKLQWLSAEEGSRETASAFFQEGNNLDMHVVPVYRKQKLTGYLRFDYHRSLVDTN GLMLRTQLSLAALFAMLLGVLLYLRKHLLKPFDRVRKLPGELAKGHWKGIVKEEKSRYAH DFLLGIGQLKDSLDTSRRRQLELEKEKKKLLLSLSHDIKTPLNTIQLYARALEEHLYTDE AQNVHAAHQIQEKGKEIEHYVEEIMKQSRHDILDIQVQNSEFYLKELIDKAVHAYKEPLR LRRMELVVKPYENLLLKGDLERSFEVVENIMENALKYGDGRRIEISCYEEDYCQLIRIFN TGNTVSDTEFHHIFESFFRASNSEGKQGNGLGLYICREIMRRMNGEIFAEKEADGMAFLL VFPY >gi|312954810|gb|AENW01000052.1| GENE 54 52959 - 53636 817 225 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 222 1 228 230 185 41.0 6e-47 MIDILLVEDHRELAQLIVSFLKRDGFQVHHVESGEAALSYLAQTEVRLLLLDIMLPHMDG FTVCKKVREHKAVPILIMSARKDRNDQLNGYELGADDYIEKPVDPQILAAKIRAVLQRTS DLHRKETISCCGVVIERAQHRAFVDGNLMELNAKEFELLTLLVSNAGKTLRKEYIFASIW GMDSFSEQQTLTVHIKMLRDKIEKNPKQPQRIKTVWGVGYRFEEV >gi|312954810|gb|AENW01000052.1| GENE 55 53643 - 54413 208 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 23 225 28 221 318 84 30 2e-15 MSGITVSNLCKTYIVNKRQNNVLRNVNLTLEEKEMIAVMGPSGSGKTTLLYTISGMDSAT AGSVKFFERELTDMSRNEISDLRLEEMGFVFQQMYMLKNLSVYDNIILPAYQSVKGRTKQ GRKEINAYAAKLMQKLGISEIADNDVNEVSGGQLQRACICRSLINHPRILFADEPTGALN KQSSHEVMEELNRIHKEGTSILLVTHDMKVASRCDRVLYIEDGNIRDEMQLGAWEDCTDI RKRERRLNEWLITLGW >gi|312954810|gb|AENW01000052.1| GENE 56 54427 - 56799 2289 790 aa, chain - ## HITS:1 COG:no KEGG:GBAA_2481 NR:ns ## KEGG: GBAA_2481 # Name: not_defined # Def: ABC transporter permease # Organism: B.anthracis_Ames0581 # Pathway: not_defined # 1 780 1 770 779 270 25.0 2e-70 MLKRMLKKDLMHRKSVNLILFLFITIATVFLASSVNNILVVSSSVDYYMDYANIPDVNLV AVNSGEKEKIMKWIETEAPGVKDYGYQEMLSVEQKNLHRENGKKFNAEGLSLFLSEERSD YCKGFDPDGRALHLADDEIGMPAFLMDKNDLKLGDKVRIMIGSEDKTFTLTTVVKDAAFG NDMVGMSRIFLNSDMYEKFKKAGSDRTYSLYFINVDSISEFTEAQNLQSFPSVLNTVSRS MYSMIYSFDLILAALLILVGICMILIALLVLRFTLLFTMEEEYREIGIMKAIGLRDKAIR RLYLVKYAFLVSSGAFLGLLISVPISRVMVAGVSVNMIMEDSGVNFFVNILCTLLIIFLV MLFCMNCTRKLSRITAISAIRGGHSGESFAKASALYLFKQKYLRVPAYLGINDMLTHLKR YALLLVTFCISFVLITIPLNTINTMQSSEMASKFTVNTDSAVYIKKIEGKQDSAYRNSAQ LKKGMQRVEREMKEKGYDAELTASSIYFLPFHAPGKKGNTKIMSLQIQGRNTEYLDYLEG SAPVLENEIAFSRLILEDNNWHIGDRIEADLNGETYKFIITGSYADYMQLGSSARLNAKL DLSKVDMFEYWNVNVDMKTDKSQTELKDTLQKQFPDYEWYTAQEIVDRNIGGIQESLSEL LIPMTAMLCAVIMLITLLMEKLFIVREKGEIAMMKSIGFRNSSIRSWQVIRMILVALVSM LAAVPLSMLSNRFMLEPIFAIMGADVHIQIIPVQVYLIYPGVLLLGIICATIFATGQIKR IHIREMNNME >gi|312954810|gb|AENW01000052.1| GENE 57 57047 - 57523 603 158 aa, chain - ## HITS:1 COG:SA0023 KEGG:ns NR:ns ## COG: SA0023 COG1576 # Protein_GI_number: 15925729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 2 158 3 159 159 149 52.0 3e-36 MIKIVAVGKIKEKALRTQIEEYEKRLRPFTKLEIIEVNDEVAPQSNSDSQNNQVKEKEGE RILAKIKEQEYVILLDLWGEMVDSERFSKKLDQLQTYQTSNLTFVIAGSLGPGKNVYDRC NWKWKLSDLTFTHQMTRVLVLEQIYRAFMIQNNNPYHK >gi|312954810|gb|AENW01000052.1| GENE 58 57520 - 58044 496 174 aa, chain - ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 8 146 21 157 173 124 45.0 7e-29 MHVEEVPEFLNIAKELLGDARVWDMQKYIQHGSISCLEHSFVVSYYSFTLVRKLRMSCDE RSLVRGALLHDYFLYDWHEAEDWHRLHGFRHPFFANRNALRDFQISEREQEIIRKHMWPL TVIPPMCREAWVVNAVDTASGIVEVLAEYRMFKRLRRRWLESKLELLKQVKENL >gi|312954810|gb|AENW01000052.1| GENE 59 58395 - 59228 960 277 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400284|ref|ZP_06644430.1| ## NR: gi|293400284|ref|ZP_06644430.1| type IV pilus biogenesis protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 273 1 278 278 190 42.0 9e-47 MKKNKKGFTLVEIIVVLVIIGILMALAVPAVMSYVRKAADTKLISEARSVMVASKEKGIE LVKKQQLDLLATDENMKDIMKRSEVEGTLMEIYKNKANNGAGDFIVLIGETYIRYDDQQQ KYEILTSYDNLFVKANEIHLALIKGEPLSIIQAFIDQKDKAFINSEGANAGNSLRKALND AGIASGYDYSFRIYASKSDNNYTITISERKVTLEDIKKGNKVKVIQYDYSGNNGFSGTPR VKTANASVKLGEDSGGTQDDYAALKLDDIKDWEVISQ >gi|312954810|gb|AENW01000052.1| GENE 60 59306 - 59923 855 205 aa, chain - ## HITS:1 COG:TM1030 KEGG:ns NR:ns ## COG: TM1030 COG1309 # Protein_GI_number: 15643788 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Thermotoga maritima # 11 168 4 161 200 62 28.0 7e-10 MEKFEELSQEKQRRIIDAGMEVFGRYEYKKANTEDIAAKAGISKGLLFYYFKDKKSFYMY LFQYCVTIVTKTLDDEDFTKITDFFALMEFGAQKKMQIMVEHPFILDFICRAFSSRREAV SSDVAMELHSLMDTTFDRFFAHVDFSKFNNDVDPKQVYQMLVWMTEGYMHEKLSCQETLN LENIMKDFEEWKVMFKKMAYKKEYQ >gi|312954810|gb|AENW01000052.1| GENE 61 59951 - 60178 199 75 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0016 NR:ns ## KEGG: Sterm_0016 # Name: not_defined # Def: metallophosphoesterase # Organism: S.termitidis # Pathway: not_defined # 4 71 103 173 177 63 46.0 2e-09 MHELKYEGHTFVLFHYPIAEWNGFYHGAIHLHGHQHNHAVVNYRNRDNGLLRYDVGVDAN AMAPVSIQEIIAFFE >gi|312954810|gb|AENW01000052.1| GENE 62 60184 - 60537 280 117 aa, chain - ## HITS:1 COG:MJ1445 KEGG:ns NR:ns ## COG: MJ1445 COG4186 # Protein_GI_number: 15669636 # Func_class: R General function prediction only # Function: Predicted phosphoesterase or phosphohydrolase # Organism: Methanococcus jannaschii # 23 104 5 88 176 68 42.0 3e-12 MHDPARMPFSKIAVCIGKAGDSRIYFTADLHFSHDHIIHLANRPYHYIKEMNEALVENWN RRICGDDEVYILGDVTMKNHVYAREMLKKRKGRKYLIEGNHGRFVHQKEFDQSIFTW >gi|312954810|gb|AENW01000052.1| GENE 63 60557 - 61645 1437 362 aa, chain - ## HITS:1 COG:lin0320 KEGG:ns NR:ns ## COG: lin0320 COG0265 # Protein_GI_number: 16799397 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Listeria innocua # 29 362 149 493 499 246 42.0 4e-65 MKRLTAFLLVALIGWNIVLTILYLQSKEDTTAATAAQQTKQKVETASVNITSDVTELVAK SENKVVTVTARARGQALDTGSGAVYKVDGKTVYIITNNHVVADGDEAVVTFANGKEQKVD IVGKDELTDLALLKTDVDFKAEAFVMGNSSLVKKGEYVIAMGSPLGIEYQGSVSGGLISG VDRRMEMDIDNNGVADWDVNVLQTDAAINPGNSGGPLINMAGELIGINSMKITDTSVEGF GFALPINEVLPIITELENNGKVVRPILGISVQPIEQLSMLDKAYLGIDSKVESGLLIVKV ASRTPAASAGIKEGDILVKFDGKEIKDYKQFRQYLYSHKVKDKVIIVVNRNGKEIEKTVI LE >gi|312954810|gb|AENW01000052.1| GENE 64 61642 - 62388 737 248 aa, chain - ## HITS:1 COG:BH4023 KEGG:ns NR:ns ## COG: BH4023 COG1235 # Protein_GI_number: 15616585 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Bacillus halodurans # 1 239 3 256 264 155 34.0 6e-38 MKFALLASGSKGNCCLIKHKDTKLVIDCGTTRKYLKSCFEQISYDPMQSNALLITHTHSD HIAQMKLFDPIPTYATQDIATSHLHAIRPYDRFELQDFRITVLPMSHDCEGTVGYVIETE DEKMVYVTDTGYIKDEVKEYIRNADYYVFESNHDIEMLMQTTRPVYLKQRIIGDCGHLCN EDCSNILCDVMGDHTKEIVLAHISQEGNTRDMALTTLKETLKRKQKDREDLRLYPADQFS IYTGGKSS >gi|312954810|gb|AENW01000052.1| GENE 65 62516 - 63862 1500 448 aa, chain - ## HITS:1 COG:BH4029 KEGG:ns NR:ns ## COG: BH4029 COG0305 # Protein_GI_number: 15616591 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Bacillus halodurans # 3 442 8 441 454 388 47.0 1e-107 MSRELPHSTEAEQSILGAMMIYPSVTSVVYDQGLDVRDFYLDIHQRIFSAMMDITDSGKP VDVTTLIARLQDIEQLNLVGGADYIIKLSDTAISSANSVYYIEMIKSRAHLRRLIEAAEQ IAEDGFDTANDLDEIMDKAERDILGVTRSRRATDFKSSREVVSNVMQELIRLRSSDNRVT GIKTGYTDLDRMTNGFQRGDLIILAARPAMGKTAFALNLALNASFYNPGAIAIFSLEMPA EALMKRILSAKSAVESNKLRSGAILDDEFSKLNEAANELMASKLFVDDSSNIKISEVFSK CRKLKSEHGLDLVVIDYLQLISGSGKSGDNRQQEISEISRSLKGLAREMECPVIALSQLS RSVETRPDKHPMLSDLRESGAIEQDADIVMFLYRDAYYAKDDEAEQNNPTDQTDLDIAKH RNGATGKVELAFQKSISAFFNIAHDGFS >gi|312954810|gb|AENW01000052.1| GENE 66 63871 - 64317 397 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167754867|ref|ZP_02426994.1| hypothetical protein CLORAM_00371 [Clostridium ramosum DSM 1402] # 1 146 1 145 148 157 53 2e-37 MKVILLSDVKKLGKKGDIVEVSDGYGRNFLLNKNLAVMATKKSMEILDEQNLQHDLEEKQ KEADAEDLKKQLAKITLEFHVKTGEGGRVFGSVSTKQIVAQLHETYGIHVDKRKVIDNDA ITSLGYTDVKVDLYRNKVIGTIRVHVNG >gi|312954810|gb|AENW01000052.1| GENE 67 64295 - 66292 763 665 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein [Aster yellows witches'-broom phytoplasma AYWB] # 143 658 185 701 849 298 33 1e-95 MDRLENFKVQIAIILIAEAAALFVLYMAGIPGLQILPMTILLILNILVIIWIVLKYERDK EQRDIDISHILGHDAKDALSFGEVGIITYDEQYNATWINEFLEERSVNVVGKKLTSWIPE ITDLFNGSVDELTASDPNGEYVYEIARKENGQVLFVRDITKLETITERFKKDSIVAGLLQ LDNYMEIQQYEDEGTMATINTQLRQPLVEWAGRYGMFIRRLRSDRFLVILNEAIFEQVVQ DKFDILNTIRKNAEDIDVSITLSMSFARGTDDFRLLDTMVNDLLELAQSRGGDQAAVKKY GESVKYFGGNSEAREKRSKVRVRVMSQAIKEAIMEADRVFVIGHQNMDFDCMGSALCMSR LAAAYGKEVYVVSDGGGIEPQLQEALMLYREKLEGRHRFISDGDAAKMIENDDLLIAVDH HNPKQTGAPQTLEAANRIVVIDHHRRSEDFIGNPLLVYVESSASSVCELATEFLPYQNNK VNLSEEEATLMYVGILVDTNRFKTRTGSRTFEAAAYLKNLGVDPITAENLLKEDFDDFEA KTEIMKYAGQYAEGILIAAVDNNRVINRTLMSQVADSLLNIKDMEASFVIGNIENGKVAV SARSKGKINVQIIMENMHGGGHFTMAALQREQTTVKAVQEELKQMIDTYLEENKEDDEDE SDTAK >gi|312954810|gb|AENW01000052.1| GENE 68 66270 - 67193 1015 307 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400278|ref|ZP_06644424.1| ## NR: gi|293400278|ref|ZP_06644424.1| hypothetical protein HMPREF0863_00562 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 306 1 310 311 319 58.0 2e-85 MNNQTRKITEGAMMCAIVGLVLFINRQLGNMLEYFMYWVLTFPILVYTAKYGVRNALVPS VSMLLLSFMISSPTTIFYLFSCIVVGLVYGGGVRKGWKNGTLLVFSGIFTFFSYLVTTVL LAAVFGYDPAEDIELVKTILELMNIHSGIDLMKTVTIIVVLVAVLMSVLQTMCIHMIGNI LLSRLHIRVHPMNNILSIRAPKWNGWLILVIWVLFYSGNVLKLNQEASTILLGAYLVCKV YAIACGAMCIMGLLVLLRKRAFVFLLMIAVFVPYVQDVIAVIGIADILFLLRDKMKRGVI NGSFGKF >gi|312954810|gb|AENW01000052.1| GENE 69 67305 - 67535 354 76 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755264|ref|ZP_02427391.1| hypothetical protein CLORAM_00769 [Clostridium ramosum DSM 1402] # 1 76 1 76 76 140 90 2e-32 MAFKKQRMGRKKVCYFTKNKIESIDYKDIELLKRFISANGKIIPRRVTGTRAKYQRMLAT AIKRARQMALLPYVSE >gi|312954810|gb|AENW01000052.1| GENE 70 67556 - 68032 534 158 aa, chain - ## HITS:1 COG:BH4049 KEGG:ns NR:ns ## COG: BH4049 COG0629 # Protein_GI_number: 15616611 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Bacillus halodurans # 1 158 1 168 168 135 50.0 3e-32 MINRVVLVGRLTKDPVLRKTANGASVVSFTVACTRRFKQEGQPDADFINTVAWNKTADIV SQYTHKGSLVGVEGRIQTRSYDDQSGKRVYVTEVVADSVQFLESKSAAASNANSNAYVPD YDQGSNQGYQSDNSSSQSYSNDFTSSDTLDIASDDLPF >gi|312954810|gb|AENW01000052.1| GENE 71 68052 - 68345 254 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755262|ref|ZP_02427389.1| hypothetical protein CLORAM_00767 [Clostridium ramosum DSM 1402] # 1 92 1 92 93 102 51 9e-21 MKKYEIMYIVNASLDDAARTKLMDSFHKIITDHEGTIDKVDEWGVKEFAYEINHMKKGYY VVVNATANNEGIHEFERLARINHSIVRYMIIKTQDEE >gi|312954810|gb|AENW01000052.1| GENE 72 68787 - 68984 74 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQDKDCRKNEISYIALLPVAPPLDEIDQRQKHQVRYNLIRMYAPFLQHTEPHAHTDTSTI TYGFL >gi|312954810|gb|AENW01000052.1| GENE 73 69268 - 69486 249 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLLIGSVTKCEEIKQAVLSMDLPLTYQGKKGLQMVFDCASDEDEKIILRKVKDELKQLS ELGGIFYNVTCG >gi|312954810|gb|AENW01000052.1| GENE 74 69641 - 70276 694 211 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2704 NR:ns ## KEGG: Cbei_2704 # Name: not_defined # Def: RDD domain-containing protein # Organism: C.beijerinckii # Pathway: not_defined # 9 198 5 194 199 188 51.0 9e-47 MQLNMTGLYTKLYAITDHTPCDVDTPKRFGAYILDWVVGGIFTGLPAVLLYSGLTKKQDM FGGLYVFESLGYARSWAFLAGALCILFALFYYVYVPWRIWPGQTLGKRVAGYRMEKTNGT AVDLITLLKRQVIGSFLLEGAAFVASNYIRQLVTLSLSYYVDYYWQIAGMILTALSLILV MKTDSHRALHDYLAKTRVTCVEKQKNEHSSI >gi|312954810|gb|AENW01000052.1| GENE 75 70281 - 71465 1109 394 aa, chain - ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 3 389 2 389 390 307 37.0 2e-83 MKYDFDEVIERRGTYCTQWDYIEDRFGEKDLLPFSISDTDFRIPKPISDTIQKVAQHEIY GYTRWNHHDFKGSITGYFQRRFQCRMEEDWILYSPSVMYSVSLLIRLLSKPKDRILSLNP MYDSFFTVIEDQERILISHDLVHGKHDFEIDFDKFEEDIKGCSIFLLCSPHNPTGRLWSP AELQTMVSICKSHGTAIISDEIHMDMQLRGRHTPILEYIGEYDRLFLVSSCSKTLNVPGL IGSYAVIPDATVRDEFLYQTRKRDFLNSASIFGMHATMVGYTECDDYVDQLCDYIRGNME LVEQFVKEHFPDMRFAMPQATYLAWIDVRAVPFSSEELQEALVHIGKVAIMKGETYGSNG EGYLRMNCGCPRAKLLEGLQRMKKAVDALYEEKR >gi|312954810|gb|AENW01000052.1| GENE 76 71455 - 72558 1438 367 aa, chain - ## HITS:1 COG:lin1391 KEGG:ns NR:ns ## COG: lin1391 COG0006 # Protein_GI_number: 16800459 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 4 359 3 353 353 218 36.0 2e-56 MAKRLGKLQAFLREQKLDALLIKSKTMKKYMDTLTGSGCQILLMRDQGYLIVDGRYLAEA NEREHDLQIVQHMPHTGGNGYLGVVEELLHKHACTSMGVESSQQLVKEYWRMEALGVEIR LLDEEIHMLRICKDEEEQRLMQEAVDITDDIYQRVIHHLHIGMSEYEISALLQYYAISAG AAQMSFETIVGTGERSALPHGRPTGRKIRAHEPILMDFGIQYKNYQSDMTRVCFIGKPQP KIASIYHIVLEAQLAGIRAMKQGAVAKQVDNAARSVITREGYGDYFTHGLGHGLGIGDGC EYPILNETGSVILQEGMMMSCEPGIYLPGIGGIRIEDDVVIRNGIGTVMNKTSKELLILK EDAEHEV >gi|312954810|gb|AENW01000052.1| GENE 77 72628 - 73953 1655 441 aa, chain - ## HITS:1 COG:lin0874 KEGG:ns NR:ns ## COG: lin0874 COG1455 # Protein_GI_number: 16799948 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 3 441 11 441 441 221 33.0 3e-57 MFDKFEAFMNKYLTPIANKMDKQVHLSAIKKAMVAMTPLLIIGSFCLIPEAIPNMIGTEN PISQWITANLDIIYIPFNVGMSLMSLYVTAIIAYHLANSYKLDVPGCMSMGIIAFLMMAV EYTEDGGISGTYLGTKGLFAAMFATIIAVELYRWCIKKHFTIKMPESVPDFVSRSFEMIP ISVIVIGFFLIIRVVCVNVFETIPPMIFTNLLAPLVGSMDNPLAFTFLQMMSCLLFFFGI HPSVLSPITSPISTQFLADNIANYKAHLPLEHFYTGGAISAFANFTGTGVTFGLVFWCIF SKAAAQKKIGRVALIPALFGINEPILFGAPIVLNPLFFIPYVIGGAILGTFPHWLMDMGL LDMPVFNPPYVGVFLEGYLVNLDWRTIVVNAIQMLGSIALWYPFFKLYEKRELENEKAVE AQKSAISAEDEALLNDLDLDF >gi|312954810|gb|AENW01000052.1| GENE 78 73994 - 74326 470 110 aa, chain - ## HITS:1 COG:lin0873 KEGG:ns NR:ns ## COG: lin0873 COG1440 # Protein_GI_number: 16799947 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 103 6 108 111 68 32.0 3e-12 MKIVLCCAGGFSTTMLMDSMKKTVKDSAKLNIDDFQFTAIPVDLLQSEVEGMDVLVIGPQ IAHKIDYIKPIIDPYHIPYVIVDKDTYGKMDGATVMKMALIARKKADMQK >gi|312954810|gb|AENW01000052.1| GENE 79 74328 - 74648 394 106 aa, chain - ## HITS:1 COG:CAC2965 KEGG:ns NR:ns ## COG: CAC2965 COG1447 # Protein_GI_number: 15896218 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Clostridium acetobutylicum # 1 101 1 101 104 68 40.0 2e-12 MNQLEQEIVGMISAAGDSKAKAFEALKMVKESRYDEARELLAQARKIDLEAHKIQTKLIT AEMSDSDEKPEIGLLMVHAQDHYMTSQLARDLIEEMINVFEAKEGK >gi|312954810|gb|AENW01000052.1| GENE 80 74664 - 75707 1144 347 aa, chain - ## HITS:1 COG:ypdE KEGG:ns NR:ns ## COG: ypdE COG1363 # Protein_GI_number: 16130316 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 347 1 344 345 230 39.0 2e-60 MKEELLVRLSNADAVASKEGEVRAILKEELSAYSDEITYDTLGSISFHKKGTAEKPLKIM FCAHMDEVGFLVRHISDIGFVYLIALGGVQQKSMEMQKVRITTASGSKVSGILNITTDEN HHVRELYVDLGCDAREEVAALGVEIGNMVCFDSNAHPFNQDHVYAGKAMDDRSGCYVLAQ AMKRLHELSLENEIILCATSSEEVGVRGGKTAVYKEDPDLVFALDVANHPELSRNYTNHR RLGKGCMLVHYDKTLAPNEKLLAFVKEIAQTHDIPYQCDMFSGGGTDAGNAGISRSGTLA MVIGIPLRYCHGSWSLVDTRDLEHTIELVVQLAKALTKERMEAFTAY >gi|312954810|gb|AENW01000052.1| GENE 81 75704 - 77602 1829 632 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 2 470 5 490 499 129 21.0 2e-29 MRLYSIMKDFLTMKEYLPMEYFMKRYDVSRRTIQNDLSYLIQISSRNGYQLHMRRGNGYL LEVINDRLLDEFMKSLEHETMFDMKDRVKNMMAYLTLQESYVSMDRMAEQFQISRTSVKK DLQEVEKQLQVHQLQLEKKSHYGIRIRGDTQHIRKLMCELYFDGNSFITQELEKEEASFS RIHEVLVHSIEREHLNINYNELKNVMVWLKVTLYLAQIQKEKRYHPDEGKDACERVGAQV IQTVEGLFTYGISKKTCQQFLEVLRINIRQMVPASSFSVSLLADIDQFLQECDEVYGTEF SEDEVFKTSLLTHVSLLIDRLHQKISYKNNLISEICIRYPMIFNIAIRFADMLKEKYDVE ATHDEVGFVATHFAAHMEKERELRIRRFNRIGVVCSTGGGSAYLIKLQIESLFVKAEVET FSFLQLEELAAFQPDLIFTIVPLNREFSAPIIYIKELLDDQDLIRIRQVLQFDNCDSLSI ADVDSYMYSLFSRDFFQISEETDYLHLLKQMADQLETCGYGGAHYADYVMERESYMSTVY AHGVAIPHPIQILAEKNMISVCILHKPLLHEGKEVRIIFMISLTRSSYEMHKDITRKLYQ LMKDEKRLERVLSSRTLEELLIVMKELDGGSI >gi|312954810|gb|AENW01000052.1| GENE 82 78042 - 78197 171 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDNERKRLRELNSKNEEFNKQLYENARSYAKGLFALSILALLILLLYLLL >gi|312954810|gb|AENW01000052.1| GENE 83 78392 - 79216 916 274 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENNEILDLLEQEYLQEYRKIQNRLLKKIRESSYLNVELHDIANQLYTAQLRSLQPQDIY NGDETAFINGIVRNVPEPLLLKNKKSKAGNRAVISILVAVIIMISFYAISRSVAIDDQRK AMGYLQESSNYRTIQQEIKEEAVYTFQLKDVSSNEGQKVYESEGNTVYLSDVEEETDAYL IYFEASGEFSTQGGSIVSVVSHDIEKKHKAYELEGSVNVILDSGMQELPWMYLSVNKTKN KDEYGFRLSKALVAGQSSVKLQLKDLVKTTWTHK >gi|312954810|gb|AENW01000052.1| GENE 84 79497 - 80852 1705 451 aa, chain + ## HITS:1 COG:FN1653 KEGG:ns NR:ns ## COG: FN1653 COG0534 # Protein_GI_number: 19704974 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 12 439 10 437 445 293 39.0 4e-79 MNKEKSKNRGLMTEGVIWKEILLFSIPLLLGNLFQQLYNAVDSVVVGNYIGAQALAAVGS SAPVINLLVSFFMGLAVGAGVIISRYFGARKKEELHIAVHTSLALTFAAGLVMTLIGVLI SPYVLQWVGTPSDVMESSVLYLRIYFLGILSVMVYNMGSGILRAVGDSRNPLYFLIVSSV TNIILDMLFVIVFHMGIAGVGWATLIAQTISAVLTMLLLMRTKEEYQVKLKHIRFHKHML YEIVRLGLPSGLQNAIVSFSNVIVQSNINAFGSLAMAGCGSYTKIDGFAILPVMSYSMAL TTFTGQNMGAKKYDRVKQGAKTGILMSVITIVCISALLLMLGPKVLAIFSSDPTVIKYGL YMMHVLAPGYIFLAISHAFNGIIRGAGITTVPMIVMVTCWCGLRMAWILTSVPLFHDIGV VFMGWPLTWIASALWLFLYYRKGKWMTRYHS >gi|312954810|gb|AENW01000052.1| GENE 85 80917 - 82230 1130 437 aa, chain - ## HITS:1 COG:ECs0875 KEGG:ns NR:ns ## COG: ECs0875 COG0513 # Protein_GI_number: 15830129 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 366 1 371 455 372 52.0 1e-103 MKFQTLHITEPILKAVKEQGYVDPTPIQEQAIPYALQGRDILGCAQTGTGKTAAFSIPTI QLLKKHYKQSIRSLIVTPTRELAIQIQENITAYAQYTTIRSAVIFGGVPQKPQERILKAG VDILVATPGRLNDLIQQGIIDISHIEIFILDEADRMLDMGFLPDVKRIIAKLPKRKQTLF FSATMPSEIRKLAQSLLHEPVSIEVTPASTTVEKIDQSLYYVDKANKKRLLLKLLQKNRV QNALVFTRTKSNANRLAKYLNENGVTSGVIHGNKSQNARQQALLQFKEGKSRVLVATDIA ARGIDVQELSHVFNFDIPNEAEVYVHRIGRTGRAGRQGCAIAFSDCNEAEYVKNIEKLIR MHIPVVEDREFPMRNLEPAASAQSQNRRRQKPAAKPSASNRSENRSAAVKHQTSAAAPKR NNRRRRPQSQKQPAHTA >gi|312954810|gb|AENW01000052.1| GENE 86 82708 - 83520 829 270 aa, chain - ## HITS:1 COG:TP0290 KEGG:ns NR:ns ## COG: TP0290 COG0561 # Protein_GI_number: 15639282 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Treponema pallidum # 3 267 2 273 277 106 28.0 5e-23 MSSFADIRLVVADLDGTLLDDEKQLDAGIADVIKELAKREIMFTLASGRNIHIMKPYLKE LSLQLPFIANNGANMFQGDACIYEKSMESVELAFAFQQLQQQDIPCIAYTNDVVFTTSLQ DARLQFFLNRLRGKTMVKQAGNDRDMLEHAIFKVVMVAKNANVMEPVLHTINAHCESLHA VRSEDDVYTITHVDATKGKTLVRLMELLQVQPKQTMVFGDNFNDATMFSESGICVCMENG QPEVKEKADYIAKANTEQGVSRFLKEYVLR >gi|312954810|gb|AENW01000052.1| GENE 87 83517 - 84362 882 281 aa, chain - ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 6 245 8 243 284 241 45.0 1e-63 MRAYELGQYEKSMPNTLSWKEKLQLCREFGFDYLEMSVDESDEKLARLQYTREERGAIVR AMEETGVRIHSMCLSGHRKYPLGHPDEHIQKKALQIMEAAVQLADDLGIRIIQLAGYDVY YEEGSEQTKQNFIRNLRHCVELAAKKGILLGFETMETPFMDTVEKSMHYVQEAASPYLGV YPDMGNLKNASLLYGKNVNEDIRTGKGHIVAAHLKETIPGHYREIPFGSGHTEFVENIRE LKQQGVRMFVGEFWYTGNSDWQKVCTHASAFLRDKLDQVFV >gi|312954810|gb|AENW01000052.1| GENE 88 84359 - 85066 968 235 aa, chain - ## HITS:1 COG:PM1244 KEGG:ns NR:ns ## COG: PM1244 COG0235 # Protein_GI_number: 15603109 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pasteurella multocida # 1 231 13 243 243 322 68.0 4e-88 MLEELKKKVLEANLLLPKYGLITFTWGNVSGIDREHGIVAIKPSGVEYDDMSAEDIVLCD LEGNVVEGKLKPSSDLMTHLEFYKNFPNIGGAVHTHSRWATAFAQAGKAIPALGTTQADY FYGDIPCTRQMSEAEIHGEYELETGHVIVETFKQKGIDPNSMPGVLVHSHGPFSWGKDPF EAVHNAVVMEECAAMAFVSVMLQNGSAQPMQKVLLDKHFKRKHGPNAYYGQGSSS >gi|312954810|gb|AENW01000052.1| GENE 89 85077 - 86102 1356 341 aa, chain - ## HITS:1 COG:no KEGG:Smon_1317 NR:ns ## KEGG: Smon_1317 # Name: not_defined # Def: FG-GAP repeat protein # Organism: S.moniliformis # Pathway: not_defined # 1 340 1 344 344 319 46.0 9e-86 MKITKRKLDEIRRCYCAASIHMKHENHIIYASEDPDVMCEMFSGKSFEHKETIWKKAGGC MSIIPIPNREGEFLAVQEFYLKVSPSLSKIVWGKYTEGGFVIKDVLQLPYIHRFDIYHRN GVNYFIGATIATAKQNKEDWSVPGRIYVGELPEDLNEGIQIEVLMDGLYRNHGYYRDAQH TCGYFGSDQGIVKVAPPAHRGGQWQVEYVLSGTIGEIAVLDIDGDGEQEIMTIEPFHGTE IHIYKKLEGSYQRVYTYENEIDFAHTLVGGTLRGVPTFLAGVRRRDAELFYVQYKDGAFV TKEIDRGVGPANLCLVNEEDRDLIVAANHTANEAAVYIVED >gi|312954810|gb|AENW01000052.1| GENE 90 86223 - 86522 365 99 aa, chain - ## HITS:1 COG:MYPU_5950 KEGG:ns NR:ns ## COG: MYPU_5950 COG3414 # Protein_GI_number: 15829066 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Mycoplasma pulmonis # 1 98 1 95 96 64 42.0 5e-11 MAGKLKLLVCCGNGAGTSMMIKLNVEKVTKKMGLGIQEIRHCAVSEGKSAAGQYDIVLCS KNFVSMFADAEKRGTKIVGLKNVMSAKEIEEGLAAAINK >gi|312954810|gb|AENW01000052.1| GENE 91 86559 - 88031 1958 490 aa, chain - ## HITS:1 COG:SP2038 KEGG:ns NR:ns ## COG: SP2038 COG3037 # Protein_GI_number: 15901859 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 466 1 472 485 422 51.0 1e-117 MDFLMSIWSFFATNILTQPAYFIGLMVLVGYLLLKKPLYEAFAGFIKATVGYMILAVGSG GLVNNFRPILVGLKDRFNLDAMVIDPYFGQNAVTAGLGERFGRTFSQVMLLLLIAFIMNL LLVRLKKWTKMRAVFTTGHVQMQQASTAFWLILFCFPTLGDTPILILMGLILGLYWAVGS NLTVEITQELTEGGGFAIAHQQMFGIAIFAKLADKLKGKSTKRLDDLKFPGFLSIFNENM VATSILMFLFFGAILLVLGKDYLVSMEFMKAADNFFFYIMTTALNFAVYLAILQLGVRTF VTELTNSFQGISNTFLPGAVPGIDCAAVFGFGSANAVTVGFLMGALGQFLAIMILLLMKS PTLVIAGFVPVFFDNAVIAIYADNRGGIKAAMLFPFISGLIQVFGSALIAGGVGLAAYGG YLGMFDWATVWPLFTVIMKFLGYFGVAIVVLILLAIPQLQYRKHPDTYFLITEDYDEYLE KMKEKEAQKA >gi|312954810|gb|AENW01000052.1| GENE 92 88058 - 88513 680 151 aa, chain - ## HITS:1 COG:SPy1952_2 KEGG:ns NR:ns ## COG: SPy1952_2 COG1762 # Protein_GI_number: 15675752 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pyogenes M1 GAS # 19 142 13 138 154 95 42.0 3e-20 MLKEIIEKGYYSFEQHFDDWQEAIRAGYRTLLEAGVVEDIYVQAVIDCVNKYGPYIVIVP DIAMPHSTEGAKGCHGTAISFMKVEEPVDFDKQDPDKKARLFFSLAAVDHEQHLHNIQEL MDALMNEELVNALLEAHTVEELQQAAQTYEA >gi|312954810|gb|AENW01000052.1| GENE 93 88526 - 89584 1303 352 aa, chain - ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 352 3 356 356 491 62.0 1e-138 MSQVDEITRESWILGAFPEWGTWLNEEIDQEVVEKGTFAMWWIGCTGLWIKTENNTNISI DLWFGNGKRTKKNKEMAKFHQMRNMTGGRMTQPNLRAAPIVYDPFAVTQVDAVLSTHYHN DHIDPFYAAAVLKNCDAAVPFIGPQKSVEKWLSYGVPKERCQVVKPGDVVKIKDTQIIVV DSFDRTCLVTNDEDVRGKCPTDMDEKAVNYIIKTPAGSVYHSGDSHYSTYYAKHGKDYDI DVALGSYGENPAGNQDKMTSVDILRMAEALNCKVVIPFHYDVWTNFKADPQEINMLYEYK KDVLDYKFHPFIWDVGGKYVWPTDQNKRQFHYRRGFEDCFTDEPNVPFRSIL >gi|312954810|gb|AENW01000052.1| GENE 94 89827 - 90624 926 265 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKGLSRLTFSETTRRIITIAIYAFFTIYTLYKLLQEPSPEGKLCYGLLLIIFMGVALWA EYLRILYQKMITALNMDCDAGLAKHYYNILKKRDFMKSYRTTQLIFDTLYYQDIGKPQTC IELLESNEKTFRSSLDYLLIRNYTYFYSYYKLGNRTKVKHWFPEVMKLKDTKIKGSKVSP LYNWEFIEAVYLSCMKDYKKSLAKFKQIDTRYMNNREMAQYYTEFGKVYKELNDKENAVI MFTKAMETGNQLSSSREAGACFHRL >gi|312954810|gb|AENW01000052.1| GENE 95 90645 - 91448 947 267 aa, chain + ## HITS:1 COG:ECs1857 KEGG:ns NR:ns ## COG: ECs1857 COG1349 # Protein_GI_number: 15831111 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 8 255 1 248 249 108 31.0 8e-24 MKMNKAVVDARRNKIMQKIQSQGKAAVEDLAEELQVSPLTIRRDLQFWEEMGAVERYYGG AKLIQHFVENDDPQLSNEQYKHAIAKYAAQYVQDGDTIFINTSSTALLVLKYIKNKRVIV ITNNGKAIFMDHDPMVSICLSGGELRIPKESMVGDFALNNLNKVSATKAFLGCSGFSVAS GMTTAILQEVAINEVMITRCIGETFILADHTKIGTNHSFISGMIQSFDYLITDHLAPEEE LLAIQEAGVKTVTLDPLTHIADSFTKR >gi|312954810|gb|AENW01000052.1| GENE 96 92288 - 92962 351 224 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 3 212 4 216 234 139 40 5e-32 MNYSVIIVAAGKGTRTGLTYNKVFYKIGNAPIITQTLKPFLEDADCAKIIMSISPHEQEE FEKIIQSEKIVYVPGGATRQESGYLGLQEVDTEFVMIHDGVRPFLTTKHLEALKAALKTE DAALLMVPLIDTIKEVKGGYVVHTPERSNYMSAQTPQAFRTELIKKCHEEAKKHPEIVAS DDAMLAELFSDTKIKVVEGSYDNIKVTTQRDLKQIHLLHEEQNT >gi|312954810|gb|AENW01000052.1| GENE 97 93138 - 93854 521 238 aa, chain + ## HITS:1 COG:CAC1424 KEGG:ns NR:ns ## COG: CAC1424 COG0491 # Protein_GI_number: 15894703 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 1 234 1 234 249 183 35.0 2e-46 MRKHMIHPSLYAYEFMELTPYKTYVYALQRDDKVYIIDTFCGSTFMDIIKADYPGKDFVV INTHYHFDHIWGNYSFSHCPIYAHQLCKTMIQRHGIRELQEQKKYFQGTQTLTLPNHCFD GKQLQMADGLQLLYTPGHTLDGISVYDQTLNALFVGDTLEKPLIQIEGSSLSEYRQTLEY FLTLPVTHFYAGHTLQLTKADVRDTLAYIHALSGNEAMQFDSEETQGIHSMNLNARKQ >gi|312954810|gb|AENW01000052.1| GENE 98 94128 - 94493 398 121 aa, chain - ## HITS:1 COG:BH0773 KEGG:ns NR:ns ## COG: BH0773 COG3731 # Protein_GI_number: 15613336 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Bacillus halodurans # 3 100 9 104 125 67 34.0 5e-12 MKYDTRISGWGECALEFLNEDCNFLIIFNETAPQELADISVLHTVAMLQEEPCVGDTVQI CDVSYTITAIGFEALHTLKELGHCCLSFSGSTQALRPGNIELKGPVFTENHLYKGGRLQI L >gi|312954810|gb|AENW01000052.1| GENE 99 94512 - 96044 1152 510 aa, chain - ## HITS:1 COG:BH0772 KEGG:ns NR:ns ## COG: BH0772 COG3732 # Protein_GI_number: 15613335 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Bacillus halodurans # 193 510 4 334 335 340 51.0 5e-93 MDAFTDLTQGFLSMFETGGEILLGWMTTILPMVVCLMTAVSAVVKLIGESRVERITKFLT RWRIARYTLLPLMAILFLGNPLCFTFGKFLDEKYKTAYYDACVSFLHPVTGLFPHANAAE LFVYMGIASGITQQKLSLSALATRYFMAGLVIMVLRGIITEQISVYLNQKKEGQKPTEEA VAEEKKDALKQQQAVRVTKGSAGWGGPLLLQADKRKHVILCVSGGGIHPIAQRLAEACQC DVIDGFAASCPDEEILAAVIDCGGTARCGIYPKKGIPTINVLPTGQSGPLARFMKEDNYV SDVGEANIEILNKDTAPTTDPMQEPESKISAQPASHKNALLRVGMGMSRVVSTCYAAGKE TIEMVLRNILPFMAFTATLLGMIQVSGLGNFIANSIAPLCATLPGMLLISLICSLPVVSP ILGPGAVIAQVVGALLGTQIALGNIPAQYALPALFAINAQAGCDFIPVGLSLCQAKAETV EAGVPAVLYSRMISGPLAVFIAYFFSIGMY >gi|312954810|gb|AENW01000052.1| GENE 100 96073 - 97113 1086 346 aa, chain - ## HITS:1 COG:lin0551 KEGG:ns NR:ns ## COG: lin0551 COG2390 # Protein_GI_number: 16799626 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 25 331 4 304 315 139 30.0 8e-33 MIVILFYYERKRLQKRGAYVKKIVDDARLIYKCCYLYYVDGMGQREICDAVGISRATVSR LLRAGKETGVVKIELENPDSVLYGELERKVEQLLGLKEVLIVDELELESKADHLQHVYEE ALMYLSRIINKGDTIGVSMGKTLSSIVNVKKSVDEVDCTFVPVVGGVGSPYQIEEGYHSN DIAKGFAMKFHGKAMQFFAPAMFDDPKVMQGFLKEKPVREVVSVFKKLKTVIMGIGTTTA KEPTLVKCGYLTKEDYEEFKQQGAVGDILLKYVDANGNSDAFRSFNERVMGMSDEKLLNV KNRVGIAVGADKGEAVLGVIRAKKVNILLTDISCIRSMMSLLGEEI >gi|312954810|gb|AENW01000052.1| GENE 101 97468 - 98760 1676 430 aa, chain - ## HITS:1 COG:BH0774 KEGG:ns NR:ns ## COG: BH0774 COG4091 # Protein_GI_number: 15613337 # Func_class: E Amino acid transport and metabolism # Function: Predicted homoserine dehydrogenase # Organism: Bacillus halodurans # 1 427 1 427 439 443 53.0 1e-124 MLNMNKKLEQREKEGKIIKCGIVGAGQMGRGMVTQMVLMKGITPAVVSDIDLELAVHAFK YAGVKDADIVRTNEVAEADKAMDEGKYVATTNSNLISQCRPVEVAIDATGVPDVGAKVAT DAINNKKHVVMLNVETDVVIGPLLDKMAKDNGVIYTGSAGDEPGAVMELYDFATAMGLEV KVMGKGKNNRIDKNCNPDTVLEEATRRKMSPKMLCAFKDGTKTMVEMTAMSNATGLVPDV IGGHGIASDVKSLNETYKLKEDGGILKQHGVVEYVNGIAPGVFVTVATDNEEIAYQMQYH SMGPGPLWTLYRPYHLCNLETPLTAAKVVIDGEPTIVPKNGLVSECITVAKIDLKAGQTI DGIGGYTTYGSICKHEEAKEKGYVPYGLVNHKAVMKRDVKKGELITYDDIELDTTTLIYK LRQEQDKIFG >gi|312954810|gb|AENW01000052.1| GENE 102 98890 - 99255 448 121 aa, chain - ## HITS:1 COG:BH0773 KEGG:ns NR:ns ## COG: BH0773 COG3731 # Protein_GI_number: 15613336 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Bacillus halodurans # 3 119 9 121 125 71 33.0 5e-13 MKYKATITGLGECALDFLDECCNFIIIFNEDAPPELADISVLHTKSEVKEDPKKGDTVRI CGVEYTIADVGWEALNTLKELGHCTLSFKGLDTVERPGIIELIGEPIKAEQLLVGGTIEI E >gi|312954810|gb|AENW01000052.1| GENE 103 99267 - 100265 1184 332 aa, chain - ## HITS:1 COG:lin0547 KEGG:ns NR:ns ## COG: lin0547 COG3732 # Protein_GI_number: 16799622 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Listeria innocua # 1 332 1 328 328 355 54.0 7e-98 MYRKVKITKGSSGWGGPLVLEPNETCNKVLCVTGGGIHPVAAKIAEMTGAETVDGFKTTV PDEQVLVAVVDCGGTARCGVYPKKRINTVNLVPVGAVGPLAQYITEDIYVSDVKEDTIAF TDEEVKVEKAVEETKEPGAPKTKAQARKELAEANQGKKPGIITRIGIGVGQVVNKFFAAG RESIEMVIKNVLPFMAFTSTILGIIQVSGLGNIIANTISPLCSTMPGMIVISLICGLPFL SPILGPGAVIAQVVGTLLGAEIGLGNIPAQYALPALFAINAQVGGDFVPVGLSLGEAEPE TIEFGVPAVLYSRVITGPLAVIIAFVFSIGMY >gi|312954810|gb|AENW01000052.1| GENE 104 100269 - 100811 608 180 aa, chain - ## HITS:1 COG:BH0771 KEGG:ns NR:ns ## COG: BH0771 COG3730 # Protein_GI_number: 15613334 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Bacillus halodurans # 1 167 1 167 182 216 64.0 2e-56 MDFISDFAQGFMALFQAGGETFVGWVTGIIPMVICLMTAINSIIKLIGEKRVENFTKKLT RFTIARYTLVPVLAVLFLGNPMCYTFGRFVEEKYKPAYYDSCVSFLHPVTGLFPHANPGE LFVYMGIAAGITKLNLPLGDLAVRYFIVGVIVILIRGVLTEKIYFRLTSKFTKEKENAEE >gi|312954810|gb|AENW01000052.1| GENE 105 100831 - 101289 523 152 aa, chain - ## HITS:1 COG:no KEGG:LSL_1892 NR:ns ## KEGG: LSL_1892 # Name: not_defined # Def: sorbitol operon activator # Organism: L.salivarius # Pathway: not_defined # 5 100 2 99 165 62 36.0 7e-09 MSNDLMLIFLIAISLFVMQAVGGVFQIKNYKAAIRRVHKKGNVGIGQKKGRFFNGNIVMI ACDNNHIITACEVMDGKTFLAKFHPVNTLLGKTINGVSIDKFLEQFRSMDPKKQKQYRGY IQALEALELRFQNAAGAQEMDTAEHLSCAVMD >gi|312954810|gb|AENW01000052.1| GENE 106 101274 - 102275 907 333 aa, chain - ## HITS:1 COG:lin0551 KEGG:ns NR:ns ## COG: lin0551 COG2390 # Protein_GI_number: 16799626 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 6 312 4 304 315 136 30.0 5e-32 MKKIVDDNRLIYKCCYLYYMDGLGQKEICDQLGISRATVSRLLKAGKENGVVRIELDNPD SILYGELERKIEQQLGLKEVLIVDEMELESKADHMQRVYEEALAYLARIFHNKDYIGVSM GKTLYHLANGKINVEEVDCTFVPVVGGVGTQLQSDEGYHSNEIANAFAKKFHGSAVQFFA PAMFNDTQIMEGFLKERPVQEVTALFKKLKTVIMGIGSCSLKDSTLVKCGYISKADYEQF KQHGAVGDVLLKFLDKNGNSEPFHEFNDRVMGLSDEGLMNIENRIGIAVGEEKSKAILGV IRAKKINILITDISCVKELLSLMEEEESSCQTI >gi|312954810|gb|AENW01000052.1| GENE 107 102272 - 102481 71 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTQYLSLFFNIVKFLSLYQYFNTEQLLKINCYNTELIHMFSIYALTSIKRCGNLKTDKG TAYRKEAQE >gi|312954810|gb|AENW01000052.1| GENE 108 102736 - 103995 1480 419 aa, chain + ## HITS:1 COG:all0266 KEGG:ns NR:ns ## COG: all0266 COG0006 # Protein_GI_number: 17227762 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Nostoc sp. PCC 7120 # 2 407 5 435 436 201 31.0 3e-51 MYKQRRHALATLLPENSIALFFSGKAPYKVGDEKYLFSVDRSFYYLSGLDKENMILAIIR TQGKIKEQLFLEHYDEEQAKWVGGKLLPEEAADISEIEEIFWLEEAMDMLGLQISRFFDH ESCVDIYADFTRQEAYQADSEAHRFTRELLRQYPYVTLHNAASRISSLRLIKEDAEIDDL KQAIEVTRQGILAMMDHVCSGMMENQVEAWFDFVLKTNGCSHSFPSIIASGRNATVLHYD ENNQKIKKNSLLLCDLGASCHYMNADITRTFPASGSFTKRQKEIYNIVLEANQTIMSLVH PGITLKELNQELIHFYEERLKPLGLLKRGKRVEDYYWHGVSHMLGLETHDVSLSGYKLRP GNVFTIEPGLYLEDEGIGIRIEDNVLVTEDGCINLSSSIIKDPDEIEAYMQENNIHLKA >gi|312954810|gb|AENW01000052.1| GENE 109 104041 - 104538 380 165 aa, chain + ## HITS:1 COG:AGc934 KEGG:ns NR:ns ## COG: AGc934 COG1970 # Protein_GI_number: 15887877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 124 1 123 142 122 52.0 3e-28 MKHIINEFKEFIMRGNVLDLAVGVIIGGAFQKIIASLVNDVIMPVITLCTGGIDFTNWFI ALDGNHYNTLQDAVAAKAATLNYGTFLTEVINFIIMAFIIFMMVKMMNSLSRKVKKPQDM EDAAAATKVCPYCKSEISAEAVRCPHCTSSLDTNKDNKTTSIKKR >gi|312954810|gb|AENW01000052.1| GENE 110 104617 - 105369 948 250 aa, chain - ## HITS:1 COG:all3753 KEGG:ns NR:ns ## COG: all3753 COG0300 # Protein_GI_number: 17231245 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Nostoc sp. PCC 7120 # 3 223 9 238 263 161 41.0 9e-40 MKALITGASSGIGRDMARVLAAMDIDLILVARRGDRLRELKRELAVSVDIVILDVSVKEN CLALYQRFRNDSVDILINNAGFGDFGEFTLTDLDKELNMISTNIQAVHILSKLFLRDFVK KDRGYILNVASSAAFLPGPLMATYYATKAYVERLTLAMHKELQKRNSHASVSVLCPGPVQ TEFDRVANVRFMMKGKTSMDVASYAIRGMFKEKAVMIPGILMKGSYLLCKCLPLSVQMEA SYHIQHRKNR >gi|312954810|gb|AENW01000052.1| GENE 111 105415 - 106755 1664 446 aa, chain - ## HITS:1 COG:SA0867 KEGG:ns NR:ns ## COG: SA0867 COG2239 # Protein_GI_number: 15926597 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Staphylococcus aureus N315 # 43 446 55 461 461 273 36.0 7e-73 MKRTITEENLLDLLLHGTAQDLQDTIDTIHPADILDLLHKHKEHAQSVLNRLPDDILADI VEEEDDEDKYELLKRFSDSKQRHILDEMSSDEITDLMGELEEDEQADILKKMDSEDQEDV RKLMSFDAESAGGIMTTEFIRIYAKNTVKDTLQFLQKNTDEETTYYLYVVDREDVLKGVV SLRDIVTSSFDTPIMDIVNPNVKTVLYSDDQEEVAHRFEKYGFILMPVVDEQQHMLGVIE FDDIIDVIQEENTEDIHHLGGVNKEERVDSSVRESFSSRIPWLIVNLFTAVLAAAVVNMF EATIAQAVALATVMPIVTGMGGNAGTQTLTIVVRGLSLGELTKENAVVILLKEIGVGILS GIVIGIVVAFGAMLMESNPIFGLVTGAAMFLNMILANLAGYFIPVILEKLHVDPALASGV FVTTVTDVMGFFMFLGLATLVLPYII >gi|312954810|gb|AENW01000052.1| GENE 112 107373 - 107723 399 116 aa, chain - ## HITS:1 COG:FN0181 KEGG:ns NR:ns ## COG: FN0181 COG3862 # Protein_GI_number: 19703526 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Fusobacterium nucleatum # 2 114 3 114 114 111 53.0 3e-25 MKNLICIVCPKGCHLSVDDENGYTVTGNSCPRGAEYGKTELIDPRRIITSTVRITAKTAR RVPVKTEQSIPKGRIMDVMKALESIDVKAPVSAGDVVLKDVAGLGVNIVATKSVEQ >gi|312954810|gb|AENW01000052.1| GENE 113 107727 - 108989 1557 420 aa, chain - ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 1 416 1 414 417 539 67.0 1e-153 MKYDVIVVGGGPAGLASALEAWKQGAKHILILERDQELGGILNQCIHNGFGLHHFKEELT GPEYAGKFIEMLKDTNVEVLLDTMVLDIDEENHCIHAMNKKQGYMQLEGKAIVLNMGCRE RTRGAIAIPGDRPAGVFTAGAAQRYVNIEGYMVGKRVLILGSGDIGLIMARRMSLEGAKV VGCVELCPYSNGLNRNIVQCLNDYDIPLYLSHTITDIQGDKRVERVIVQEVDEKRQPIPG TEITFDVDTVLLSVGLIPENELSRAAGLQMDPRTNGPVVYENMETSAKGIFASGNVVHVH DLVDFVTAESERAGRSAAIYAMQGNPKAGRCIEVKNGNAVNYTVPQKIRMNNVDKFVEVM FRVNNVYKDMEICVMSGDQKLAGFKREHMAPGEMEKIVIPKMLLEKAGDEVIIRVEKAGA >gi|312954810|gb|AENW01000052.1| GENE 114 108986 - 110431 1502 481 aa, chain - ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 1 474 23 498 498 497 51.0 1e-140 MYDVAIIGAGIAGCSLAYELGKYQIKAVLIEKENDVSVGTTKANSAIIHGGYDPLPGSKM AKYNVAGNAYIKELCGKLDIPYKQIGALIMAFSEADERTLEELKNRGIQNGVKDMEIWDK ERLHREEPHVSQEARAALYSPNVGIVSPWELALALAEVAVENGVEVKLNTEVKNIEKTDT GYSIETNQGVIDAVCVCNAAGVFADEVNEMVNDATFKIEPNKGEYYLLDKSQGNLVSHVI FQCPNENGKGVLVAPTVHGNLIVGPDSQPTSREDVSTTAEGLSYVRNTALKSIPDINFRE SIRNFAGVRARTKEDDFFVYEDPENRLFYNIAGMASPGLSSAPAIALDVIEMMKESGLPL TKKEACMDTRSVVRFREMNHEERTALIKEHPEYGKIICRCETVTEGEIIDAVHRPIPAVS IDAVKRRCNAGMGRCQGGFCGPRVQEIIARELKKNLKDVPLDREGMILITGETKAAGGEQ E >gi|312954810|gb|AENW01000052.1| GENE 115 110742 - 111830 877 362 aa, chain + ## HITS:1 COG:HI1635 KEGG:ns NR:ns ## COG: HI1635 COG1609 # Protein_GI_number: 16273524 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Haemophilus influenzae # 8 353 3 331 336 126 29.0 7e-29 MGKRNKVTTRDIAEYTGVSQSSVSMILSNKQNVSFSDETRELVLSAAKKLGYQKPVKKQL NASSKMDKTIVVLTPLLSNGYYATLVHSITEQAGEYGYSVFTVTTMRDAAQEEFYFDMLA GLQLAGAICLYPPTRITKANALAKQIPVVSIGDKPEGCTFDSVELDGRKTGYLMGEYLVG LGHTHITFVSTPIKAKEISRLHRLEGLKAAFEEHGQSQDNILVKTPSIATYRQYPSESSE YMTGFDLALEALKEHTPSTAFVGNNDMTAFGVMAALTQQGYRIPQDYSVAGFDNIHLSSM PNISLTSVEHASILKGKEAVDMIYKKNNKDTRSRGHKYILRLEYEPELIIRKSTGKCRNR SR >gi|312954810|gb|AENW01000052.1| GENE 116 112178 - 114109 746 643 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 615 5 744 815 291 28 8e-78 MKYRLNTQVSAILDTAREEAREMGNNYVGSEHLLLAILKDTATPLSRLLCAQGVYYFQLK EDLMVLFGLKDQDVEELQITQVVDDILERGMSLSSRKQNTMMDVDSLTLALLQTNSCVAT EILHRYDVDEEVVLLQMEHGSMSELDKISELRNLNMCGANQDIVGRDAELNFMISVLSRK DKANPLLIGEPGVGKTALVEKLAGMIQQNLVPSLKDACIYELHLNSLVAGTKYRGDFEEK LQNIIRLLEKYPNVILFIDEIHLMIGAGKSEGSIDVSSVLKPYLARGVIKCIGATTIEEY EMYIEKDRALERRFQIITIREPDVEDTIKMLKAKKKEYEDFHNVKIQEKVLEQIVKYCAY YMPQRKFPDKAIDVLDLACVGAKRQSERSVSEDMVRDVIEKLTDIPLASRNRLQELKKHL ETTMVAQKEVIRKLMGQLEWIEQGIISERPLGVWLFLGNQGVGKKTLIHQFNRLYFNQED MVELDMAALEHNLDHNLSKLRRNPYTIVNVTNLHMANEAMLQFLKQGIERGYLERDIQKI DLRHSIMIMSGDFPCSSVSALKFQETSDPLLQVKRSLGASFTALFDEVFVFHDLEQKDKV TVMKNILKKWKKTMEETAILEAIESSSTLDEAAKKLKKKIVKA >gi|312954810|gb|AENW01000052.1| GENE 117 114287 - 114463 224 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKRVRSSPRTSSVILSVSIISVSIIGGIVLFPILGIGSILLVAVVIFLLSRNQNPRC >gi|312954810|gb|AENW01000052.1| GENE 118 114557 - 114934 442 125 aa, chain - ## HITS:1 COG:lin1982 KEGG:ns NR:ns ## COG: lin1982 COG0346 # Protein_GI_number: 16801048 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Listeria innocua # 1 116 1 116 125 83 31.0 1e-16 MISNIAKITVYVKNSAEAKKFWTENMGFVIREEQLMGPGMTWLETAPDYHAQTTIVLFER SRMEKANPQVSTAHPSVMFTCADIEEEYHRLLSNGVIVDDIQKYPYGRMFSFYDQDHQVY LLREA >gi|312954810|gb|AENW01000052.1| GENE 119 114985 - 115251 288 88 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_3540 NR:ns ## KEGG: EUBREC_3540 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 13 84 3 75 79 67 45.0 2e-10 MQKLHEPRQRLYKKYVDVLTVMGKNEVLKPVAVLWDNGIKYEIDRVLQIRNKASSVGGCG LCYECVIQGQKRDLYFERTRWFLESTKP >gi|312954810|gb|AENW01000052.1| GENE 120 115260 - 116510 1386 416 aa, chain - ## HITS:1 COG:BS_yqjW KEGG:ns NR:ns ## COG: BS_yqjW COG0389 # Protein_GI_number: 16079428 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Bacillus subtilis # 4 394 3 394 412 243 36.0 4e-64 MQKKDRIIVHSDINHCYAQIEEMKYPGLRDVPMAVGGNEEERHGIILAKNDKAKAFHIKT GESLREALAKCPQLRILKPDYEEYMYYTERVKDIYREYTDKVESFGLDEAWIDLSESTAL FGSGMSIARKIQNRVEHELGMTVSMGVSYNKIFAKIGSDMDKHKGLVEITRENYRERIWP LPVQDLFYVGRATKHKLAHYSIETIGQLAQLPQGWMKDRFGKVGELIWWFANGEDVSEVA LSSHQEQVKSVGNAITAPKDIKSFEDAKIVYYVLAESVASRLREQGLRGNVISVTLRSTE LTWFSRQRKLAQATNIAAEIMPVVLSLLEENYDFSTPLRTIGVTLGGIEKDSGMTQLNLF VSEEERHRQRMLEETMDAIRDRFGFSKIQRCSLLKDRHLTDFNPKEDHVVHPVGFF >gi|312954810|gb|AENW01000052.1| GENE 121 116657 - 117241 574 194 aa, chain + ## HITS:1 COG:BH2356 KEGG:ns NR:ns ## COG: BH2356 COG1974 # Protein_GI_number: 15614919 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Bacillus halodurans # 69 188 87 200 207 70 34.0 2e-12 MKLSDLLTYYRHRDSLSLESVGDFVGVSKSTVKRWESGESSNVPQARLDRLSELFGIDVP ACLQGHVKPILGYVKAGYDLFANENLLGYEEVSAREAAQGDYYLRVQGDSMTGSRIYDGD LVYVKSCSDVENGDIAVVLLNHSEVTIKKILKKEHTVILMATNPVVEPRVFTQEEIEEGQ LKIIGKVLHSKIRF >gi|312954810|gb|AENW01000052.1| GENE 122 117438 - 117677 193 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTDEMLEYIQLHCNLNYISDIRNPIYLKECLAFLNEIDNDAFTIQQWRYLCEYITGQEC SSSAIDAIRKIINSFSHRV >gi|312954810|gb|AENW01000052.1| GENE 123 117722 - 117940 400 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402309|ref|ZP_06646446.1| ## NR: gi|293402309|ref|ZP_06646446.1| hypothetical protein HMPREF0863_02587 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 72 1 71 72 66 44.0 5e-10 MYAIRSKKTNRWFHGINAQAGAGSSLRIQMDDMLPALFRTKEMARVELLLNHLSTQSYEI LEVNLQVLEHVS >gi|312954810|gb|AENW01000052.1| GENE 124 118022 - 118696 918 224 aa, chain + ## HITS:1 COG:CAC0224 KEGG:ns NR:ns ## COG: CAC0224 COG0745 # Protein_GI_number: 15893516 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 221 1 222 223 198 45.0 6e-51 MYRIMIIEDNEKIRNELCDFLGKNGYEALGPDDFEHTLDIIHKEQPDLLLLDLNLPVVDG HFICREVRKSSDMPIIIVTSRDSDMDELISMNLGADDFVTKPYNLQILLARIARVLQRTY EHASSNILTIHDIALDISKSTLTWKGNSIDLTKNELRIMHCLFQNKNKIVSRNELMQHMW DCDLFVDDNTLTVNINRLRKKLEYLRLDDLIQTKRGMGYIIYED >gi|312954810|gb|AENW01000052.1| GENE 125 118686 - 119699 1126 337 aa, chain + ## HITS:1 COG:lin1852 KEGG:ns NR:ns ## COG: lin1852 COG0642 # Protein_GI_number: 16800919 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 6 328 6 334 346 187 34.0 3e-47 MRTNEFIREKLYLIMISFLTSIITILFLYAIQVNGQVILIISLLQWGMVLACLIIEYLRR STYYHRLEQTLDGLDQKYLLTEIIDEPLFMDGKILYETLRIVDKSMADNVNRYRISQNEY KDYIEMWVHEIKTPLAASKLIISNNPSEVTLSLQEEIEKVEGFVEQALFYARSTNPEKDY IIKELSLQECVSKVIRKHSKSFIYQKIKIQLDDLELSVYSDSKWLEFILDQIISNALKYT PKEVGTIHIWTTSTDNMISLHIQDNGSGISSSELGRIFEKGFTGTNGRLNEKATGMGLYL CKTLCNKLYLGIRAESVQGQGTTIILDFPISKLMLLK >gi|312954810|gb|AENW01000052.1| GENE 126 119864 - 120070 329 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRIWAYAFEIGIVMMGILLVINLLFPTFLSEGIYSCMLILFLVSVLLLKLSNISERMKD KTNRGGIL >gi|312954810|gb|AENW01000052.1| GENE 127 120067 - 120834 260 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 222 1 219 223 104 28 2e-21 MKTILTVENIEKYYGNRSNITKAVDNISFSVDEGEFIGVMGPSGSGKTTLLNCISTIDTV TSGHIYINGKDITQLKKNDLSSFRRKELGFIFQDFNLLDTLTAYENIALALTIQKVKPAQ IGKRIESVAKKLDITDVLQKYPYQMSGGQKQRVASARALITNPSLILADEPTGALDSKSS RMLLDSMERLNIEYNATIMMVTHDAFTASYAHRILFIKDGKIFNEIIRGESSRKDFFNQI MEVVTLLGGDTSNVL >gi|312954810|gb|AENW01000052.1| GENE 128 120824 - 122866 1475 680 aa, chain + ## HITS:1 COG:BH0287 KEGG:ns NR:ns ## COG: BH0287 COG0577 # Protein_GI_number: 15612850 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus halodurans # 1 642 1 674 722 179 27.0 2e-44 MYFKLALRNVKKSFKDFLVYFLTLTFSVCLFYTFNSFQSQQAVMKLNESQLMIVDQLTLL MRLVSIFVAVVLAFLILYANNFLIRRRKKELGLYTMLGMPRGKISRVLVYETLTIGIISL LSGMVLGLIVSQVLTAVTANLFAVPLDYHFVFSPSATIMTVFSFSMIFFITMIFNTMVLN RYKLIDLLNADRRNDELKIKKVWMSLLLFLISIACLGWAYHQALDNGIMAFNSLGIIILV GSIGTVLFFLSLAGFLLTVVKSSKGIYFKNLNCFILRQINSNINTNFISMSIVCIMLLLS IGALSTGLSLNNTMNKSIKNNTPYDYTIVAEYGYYQNGTKKNDGDLLLQDAIPRLQIDPS YIKSQSILTTYTSELKVNDKNLMDHISDKTSRLLLEDNGKESVIAVPLSSYNTVRKRLGY EPVKLKNNELYLYTSVETLSPAVNDILDAKPEVTVFHKKARVVNDSYETISLGTNSSMNG YMLAVVVPDALIPKNAEINEIYWNIDLSSKTSCEKFDKYFDQQRSKLYEESSGEDVFPAF MRSSKQDVYDMNKGMAVTFTYIGIYLGTVFMIASAVILALQQLSQANDNKKRYLILSKIG TEQRMINRSILLQIAIYFMMPLALAIVHSVVGIKMVNTLVTMFGRGDIMMSSFFTAAIIL VIYGSYFLVTYAGYKNILKS Prediction of potential genes in microbial genomes Time: Sat May 14 03:01:00 2011 Seq name: gi|312954455|gb|AENW01000053.1| Clostridium sp. HGF2 contig00037, whole genome shotgun sequence Length of sequence - 322487 bp Number of predicted genes - 325, with homology - 293 Number of transcription units - 173, operones - 82 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 567 - 1289 516 ## Amet_3274 hypothetical protein - Prom 1316 - 1375 8.9 - Term 1578 - 1603 -0.5 3 2 Op 1 1/0.051 - CDS 1652 - 2086 527 ## COG4492 ACT domain-containing protein 4 2 Op 2 19/0.000 - CDS 2086 - 2967 1017 ## COG0083 Homoserine kinase 5 2 Op 3 . - CDS 2960 - 4453 1612 ## COG0498 Threonine synthase - Prom 4490 - 4549 7.2 + Prom 4454 - 4513 8.4 6 3 Op 1 . + CDS 4571 - 5752 1437 ## COG0460 Homoserine dehydrogenase 7 3 Op 2 13/0.000 + CDS 5757 - 7067 1509 ## COG0527 Aspartokinases 8 3 Op 3 . + CDS 7133 - 8158 1315 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 8200 - 8245 4.5 - Term 8313 - 8372 -0.9 9 4 Op 1 . - CDS 8374 - 8571 145 ## 10 4 Op 2 . - CDS 8617 - 9015 419 ## gi|293400496|ref|ZP_06644641.1| conserved hypothetical protein 11 4 Op 3 . - CDS 9041 - 9802 635 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 9989 - 10048 4.5 - Term 9942 - 9991 1.4 12 5 Tu 1 . - CDS 10071 - 10427 499 ## gi|293401831|ref|ZP_06645972.1| hypothetical protein HMPREF0863_02112 + TRNA 10682 - 10767 54.0 # Leu GAG 0 0 + Prom 10684 - 10743 80.3 13 6 Tu 1 . + CDS 10804 - 10983 98 ## - Term 10857 - 10918 13.2 14 7 Tu 1 . - CDS 10994 - 11782 674 ## COG0500 SAM-dependent methyltransferases - Prom 11833 - 11892 7.5 - Term 12323 - 12370 7.6 15 8 Op 1 . - CDS 12373 - 13137 592 ## CKR_2198 hypothetical protein 16 8 Op 2 . - CDS 13134 - 14045 310 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 17 8 Op 3 . - CDS 14048 - 14248 358 ## Cthe_1537 hypothetical protein 18 8 Op 4 . - CDS 14248 - 15351 1278 ## COG1396 Predicted transcriptional regulators - Prom 15560 - 15619 5.0 - Term 15771 - 15817 4.2 19 9 Tu 1 . - CDS 15871 - 16653 856 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - TRNA 16856 - 16941 60.1 # Leu CAG 0 0 - TRNA 17136 - 17221 60.1 # Leu CAG 0 0 - Term 17560 - 17598 4.5 20 10 Tu 1 . - CDS 17797 - 18843 321 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase - Prom 18895 - 18954 3.3 - Term 18990 - 19037 -0.7 21 11 Tu 1 . - CDS 19103 - 20272 1238 ## COG0153 Galactokinase + Prom 20602 - 20661 3.9 22 12 Tu 1 . + CDS 20693 - 21586 490 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 21672 - 21719 -0.6 - Term 21566 - 21600 1.5 23 13 Tu 1 . - CDS 21672 - 23618 1505 ## COG3711 Transcriptional antiterminator - Prom 23639 - 23698 7.2 + Prom 23742 - 23801 5.3 24 14 Op 1 10/0.000 + CDS 23825 - 24136 472 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 24163 - 24222 2.0 25 14 Op 2 13/0.000 + CDS 24248 - 25489 1190 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 26 14 Op 3 2/0.000 + CDS 25517 - 25843 333 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Prom 25847 - 25906 1.8 27 14 Op 4 . + CDS 25935 - 27380 1320 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Prom 27515 - 27574 6.3 28 15 Tu 1 . + CDS 27599 - 28789 759 ## COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain - Term 28770 - 28803 3.1 29 16 Tu 1 . - CDS 29035 - 29181 92 ## 30 17 Op 1 3/0.000 - CDS 29327 - 29866 351 ## COG1335 Amidases related to nicotinamidase 31 17 Op 2 1/0.051 - CDS 29936 - 31153 1310 ## COG0477 Permeases of the major facilitator superfamily - Prom 31177 - 31236 3.3 32 18 Tu 1 . - CDS 31278 - 33470 2383 ## COG2200 FOG: EAL domain - Prom 33496 - 33555 4.2 33 19 Tu 1 . - CDS 33597 - 34127 335 ## HMPREF0868_1331 acetyltransferase, GNAT family - Prom 34160 - 34219 1.7 34 20 Op 1 . - CDS 34250 - 35065 714 ## COG0657 Esterase/lipase - Term 35074 - 35101 -0.8 35 20 Op 2 . - CDS 35113 - 35538 530 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 35580 - 35639 7.4 36 21 Tu 1 . + CDS 35968 - 36735 812 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 36752 - 36811 1.8 37 22 Tu 1 . + CDS 36859 - 37419 519 ## COG1971 Predicted membrane protein + Term 37468 - 37524 4.4 - Term 37456 - 37512 12.0 38 23 Op 1 . - CDS 37527 - 38378 791 ## 39 23 Op 2 . - CDS 38375 - 39496 1143 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Prom 39526 - 39585 5.7 - Term 39910 - 39953 2.0 40 24 Op 1 . - CDS 40006 - 40986 1198 ## COG0673 Predicted dehydrogenases and related proteins 41 24 Op 2 . - CDS 41062 - 41730 825 ## COG0120 Ribose 5-phosphate isomerase 42 24 Op 3 10/0.000 - CDS 41781 - 42701 1207 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 43 24 Op 4 . - CDS 42698 - 43447 1167 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 43467 - 43526 6.7 44 25 Op 1 . - CDS 43719 - 43925 64 ## 45 25 Op 2 . - CDS 43958 - 44920 1250 ## COG1482 Phosphomannose isomerase 46 25 Op 3 . - CDS 44922 - 45722 782 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 45962 - 46021 9.8 + Prom 45715 - 45774 6.2 47 26 Op 1 4/0.000 + CDS 46019 - 46798 811 ## COG0561 Predicted hydrolases of the HAD superfamily 48 26 Op 2 . + CDS 46816 - 47595 955 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 47664 - 47710 7.5 49 27 Tu 1 . - CDS 47946 - 48869 929 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 48963 - 49022 3.6 - Term 49002 - 49041 4.3 50 28 Tu 1 . - CDS 49071 - 49373 335 ## - Prom 49474 - 49533 6.1 51 29 Op 1 13/0.000 - CDS 49992 - 50816 514 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 52 29 Op 2 13/0.000 - CDS 50800 - 51582 434 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 53 29 Op 3 . - CDS 51605 - 52075 474 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 54 29 Op 4 . - CDS 52079 - 52819 648 ## COG0434 Predicted TIM-barrel enzyme - Prom 52873 - 52932 5.2 - Term 52877 - 52925 -0.3 55 30 Tu 1 . - CDS 52984 - 53394 522 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 53432 - 53491 6.9 56 31 Tu 1 . - CDS 53912 - 56626 2757 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 56751 - 56810 5.5 + Prom 56602 - 56661 2.3 57 32 Op 1 . + CDS 56763 - 57980 1263 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 58 32 Op 2 . + CDS 58022 - 59248 985 ## COG2200 FOG: EAL domain - Term 59443 - 59481 -0.5 59 33 Tu 1 . - CDS 59502 - 60131 673 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 60163 - 60222 1.8 - Term 60193 - 60225 2.3 60 34 Op 1 1/0.051 - CDS 60226 - 60957 916 ## COG2188 Transcriptional regulators 61 34 Op 2 . - CDS 61001 - 62740 1957 ## COG1482 Phosphomannose isomerase 62 34 Op 3 . - CDS 62743 - 63297 687 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes 63 34 Op 4 . - CDS 63294 - 64070 870 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes - Prom 64109 - 64168 6.5 - Term 64207 - 64237 -0.9 64 35 Tu 1 . - CDS 64238 - 64996 876 ## COG2188 Transcriptional regulators - Prom 65020 - 65079 6.9 + Prom 65025 - 65084 10.6 65 36 Op 1 . + CDS 65104 - 65805 936 ## COG0274 Deoxyribose-phosphate aldolase 66 36 Op 2 . + CDS 65802 - 66671 950 ## COG1091 dTDP-4-dehydrorhamnose reductase + Term 66681 - 66722 5.0 + Prom 66870 - 66929 6.6 67 37 Tu 1 . + CDS 67127 - 68002 779 ## gi|293401868|ref|ZP_06646009.1| hypothetical protein HMPREF0863_02149 + Prom 68063 - 68122 7.0 68 38 Tu 1 . + CDS 68219 - 68740 144 ## 69 39 Tu 1 . - CDS 68909 - 69220 319 ## gi|295099961|emb|CBK89050.1| hypothetical protein - Term 69233 - 69273 4.0 70 40 Op 1 13/0.000 - CDS 69294 - 70184 871 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 71 40 Op 2 13/0.000 - CDS 70187 - 71026 697 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 72 40 Op 3 9/0.000 - CDS 71091 - 71582 525 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 73 40 Op 4 . - CDS 71616 - 72044 553 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 72100 - 72159 2.2 - Term 72470 - 72513 -0.7 74 41 Tu 1 . - CDS 72541 - 73482 1219 ## COG1482 Phosphomannose isomerase - Prom 73555 - 73614 10.7 + Prom 73566 - 73625 8.6 75 42 Tu 1 . + CDS 73647 - 74540 887 ## COG1082 Sugar phosphate isomerases/epimerases - Term 74626 - 74658 -0.3 76 43 Op 1 . - CDS 74671 - 74997 382 ## gi|293401877|ref|ZP_06646018.1| hypothetical protein HMPREF0863_02158 77 43 Op 2 4/0.000 - CDS 75038 - 75841 916 ## COG0561 Predicted hydrolases of the HAD superfamily 78 43 Op 3 . - CDS 75822 - 76643 832 ## COG0561 Predicted hydrolases of the HAD superfamily 79 43 Op 4 . - CDS 76665 - 77198 701 ## gi|293401880|ref|ZP_06646021.1| hypothetical protein HMPREF0863_02161 - Prom 77221 - 77280 7.8 80 44 Tu 1 . - CDS 77283 - 78437 1597 ## COG0477 Permeases of the major facilitator superfamily - Term 78450 - 78489 7.3 81 45 Op 1 4/0.000 - CDS 78614 - 79174 810 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 82 45 Op 2 . - CDS 79188 - 79814 962 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 83 45 Op 3 . - CDS 79819 - 80583 1052 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 80661 - 80720 4.6 + Prom 80715 - 80774 5.9 84 46 Tu 1 . + CDS 80794 - 81678 957 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Term 81749 - 81779 0.0 85 47 Op 1 . - CDS 81896 - 83254 1469 ## BL05185 hypothetical protein 86 47 Op 2 . - CDS 83258 - 83665 344 ## - Prom 83873 - 83932 5.9 87 48 Tu 1 . + CDS 83986 - 84528 582 ## CKR_2027 hypothetical protein + Term 84621 - 84650 1.4 - Term 84681 - 84724 8.2 88 49 Tu 1 . - CDS 84729 - 86069 1639 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 86103 - 86162 6.2 89 50 Op 1 . - CDS 86229 - 87296 1129 ## COG1363 Cellulase M and related proteins 90 50 Op 2 . - CDS 87365 - 87991 675 ## SGO_0403 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein - Prom 88195 - 88254 5.0 - TRNA 88478 - 88553 90.1 # Asn GTT 0 0 - Term 88812 - 88840 1.0 91 51 Op 1 . - CDS 88841 - 89503 804 ## COG0274 Deoxyribose-phosphate aldolase - Prom 89530 - 89589 3.7 92 51 Op 2 . - CDS 89592 - 90599 826 ## gi|293402344|ref|ZP_06646481.1| hypothetical protein HMPREF0863_02622 - Prom 90626 - 90685 4.4 93 52 Tu 1 . - CDS 90833 - 91519 752 ## COG3546 Mn-containing catalase - Prom 91576 - 91635 4.0 + Prom 91526 - 91585 7.4 94 53 Tu 1 . + CDS 91606 - 92004 436 ## COG5496 Predicted thioesterase + Term 92061 - 92120 8.3 95 54 Op 1 . - CDS 92376 - 94514 1716 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 96 54 Op 2 . - CDS 94511 - 95443 748 ## gi|293402340|ref|ZP_06646477.1| conserved hypothetical protein 97 54 Op 3 . - CDS 95440 - 96405 877 ## COG0714 MoxR-like ATPases - Prom 96437 - 96496 4.6 98 55 Tu 1 . - CDS 96589 - 97233 530 ## gi|160916324|ref|ZP_02078531.1| hypothetical protein EUBDOL_02355 - Prom 97456 - 97515 3.6 + Prom 97030 - 97089 5.6 99 56 Tu 1 . + CDS 97339 - 97848 406 ## - TRNA 97957 - 98032 88.7 # Ala TGC 0 0 - TRNA 98051 - 98127 91.6 # Ile GAT 0 0 100 57 Op 1 . - CDS 98486 - 99427 639 ## DSY5047 hypothetical protein 101 57 Op 2 . - CDS 99432 - 99659 202 ## - Prom 99797 - 99856 4.3 - TRNA 100201 - 100276 89.7 # Ala TGC 0 0 - TRNA 100295 - 100371 91.6 # Ile GAT 0 0 + Prom 100372 - 100431 7.3 102 58 Tu 1 . + CDS 100557 - 101405 564 ## COG0582 Integrase + Term 101594 - 101643 14.0 103 59 Tu 1 . + CDS 101801 - 102076 56 ## + Term 102174 - 102203 0.5 - Term 102098 - 102137 0.0 104 60 Tu 1 . - CDS 102267 - 102953 826 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 103196 - 103255 2.9 + Prom 102931 - 102990 6.3 105 61 Op 1 . + CDS 103128 - 103496 198 ## gi|293402332|ref|ZP_06646469.1| hypothetical protein HMPREF0863_02610 106 61 Op 2 . + CDS 103490 - 104560 1333 ## COG3409 Putative peptidoglycan-binding domain-containing protein + Term 104565 - 104599 2.8 - Term 105040 - 105076 2.3 107 62 Op 1 . - CDS 105099 - 105755 675 ## EUBELI_01749 hypothetical protein 108 62 Op 2 8/0.000 - CDS 105752 - 106603 958 ## COG1131 ABC-type multidrug transport system, ATPase component 109 62 Op 3 . - CDS 106606 - 106977 466 ## COG1725 Predicted transcriptional regulators - Prom 106998 - 107057 7.4 - Term 107698 - 107728 -0.9 110 63 Tu 1 . - CDS 107825 - 108745 709 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 108936 - 108995 6.9 - Term 109127 - 109160 1.5 111 64 Op 1 40/0.000 - CDS 109232 - 110365 1116 ## COG0642 Signal transduction histidine kinase 112 64 Op 2 . - CDS 110362 - 111051 804 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 111072 - 111131 1.8 - Term 111272 - 111325 4.1 113 65 Op 1 . - CDS 111441 - 111875 569 ## gi|293400734|ref|ZP_06644879.1| hypothetical protein HMPREF0863_01019 114 65 Op 2 . - CDS 111859 - 112371 381 ## gi|293400733|ref|ZP_06644878.1| cytochrome B 115 65 Op 3 . - CDS 112368 - 112859 503 ## ABC2982 hypothetical protein - Term 113222 - 113252 -0.4 116 66 Tu 1 . - CDS 113262 - 114260 714 ## COG2199 FOG: GGDEF domain 117 67 Tu 1 . - CDS 114625 - 115038 449 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 115073 - 115132 4.6 + Prom 115032 - 115091 4.2 118 68 Tu 1 . + CDS 115236 - 116303 658 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 116328 - 116387 3.8 119 69 Tu 1 . + CDS 116443 - 118389 1603 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 120 70 Op 1 . - CDS 118605 - 119570 360 ## gi|225390429|ref|ZP_03760153.1| hypothetical protein CLOSTASPAR_04182 121 70 Op 2 . - CDS 119521 - 120075 388 ## gi|239628817|ref|ZP_04671848.1| predicted protein - Prom 120252 - 120311 7.5 122 71 Op 1 . - CDS 120769 - 121116 311 ## Elen_1466 YolD-like protein 123 71 Op 2 . - CDS 121106 - 122359 996 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 122494 - 122553 6.2 + Prom 122440 - 122499 5.9 124 72 Tu 1 . + CDS 122524 - 123120 578 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 125 73 Tu 1 . - CDS 123167 - 123697 307 ## COG0262 Dihydrofolate reductase - Prom 123766 - 123825 5.0 - Term 123878 - 123935 9.6 126 74 Tu 1 . - CDS 123974 - 125074 844 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 125209 - 125268 7.0 + Prom 125235 - 125294 4.7 127 75 Tu 1 . + CDS 125512 - 127779 1190 ## COG0178 Excinuclease ATPase subunit + Prom 127877 - 127936 3.1 128 76 Tu 1 . + CDS 127971 - 129584 1986 ## BCAH820_4844 collagen triple helix repeat domain protein + Term 129613 - 129661 0.0 - Term 129600 - 129649 8.1 129 77 Tu 1 . - CDS 129670 - 129990 250 ## gi|288870958|ref|ZP_06115911.2| conserved hypothetical protein - Prom 130078 - 130137 6.2 - Term 130135 - 130184 8.5 130 78 Tu 1 . - CDS 130232 - 130606 365 ## DSY1255 hypothetical protein - Prom 130631 - 130690 8.4 + Prom 130741 - 130800 5.2 131 79 Op 1 . + CDS 130979 - 131623 359 ## COG1738 Uncharacterized conserved protein 132 79 Op 2 . + CDS 131610 - 132830 1049 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Term 132833 - 132893 0.5 - Term 132794 - 132829 -0.6 133 80 Tu 1 . - CDS 132987 - 133154 71 ## - Prom 133198 - 133257 4.6 134 81 Tu 1 . - CDS 133259 - 133798 299 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 133820 - 133879 5.1 135 82 Op 1 . - CDS 134016 - 134168 78 ## 136 82 Op 2 . - CDS 134104 - 134793 657 ## COG2207 AraC-type DNA-binding domain-containing proteins 137 82 Op 3 . - CDS 134808 - 135890 660 ## COG4927 Predicted choloylglycine hydrolase - Prom 135920 - 135979 7.2 - Term 136140 - 136182 6.2 138 83 Op 1 59/0.000 - CDS 136224 - 136628 381 ## PROTEIN SUPPORTED gi|229015546|ref|ZP_04172542.1| 30S ribosomal protein S9 139 83 Op 2 . - CDS 136641 - 137078 505 ## PROTEIN SUPPORTED gi|167756118|ref|ZP_02428245.1| hypothetical protein CLORAM_01638 - Prom 137128 - 137187 5.9 140 84 Tu 1 . - CDS 137564 - 138427 1035 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 138474 - 138533 8.9 - Term 138556 - 138591 1.0 141 85 Op 1 35/0.000 - CDS 138605 - 140464 193 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 142 85 Op 2 4/0.000 - CDS 140464 - 142188 1780 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 143 85 Op 3 1/0.051 - CDS 142220 - 142648 408 ## COG1846 Transcriptional regulators - Prom 142684 - 142743 6.8 144 86 Tu 1 . - CDS 143830 - 145833 1756 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 145907 - 145966 3.4 145 87 Op 1 . - CDS 146183 - 146482 298 ## GYMC10_4527 YCII-related protein - Prom 146511 - 146570 3.5 146 87 Op 2 . - CDS 146577 - 147104 270 ## Sterm_1580 hypothetical protein - Prom 147289 - 147348 2.7 147 88 Op 1 . - CDS 147422 - 147883 400 ## BVU_1494 hypothetical protein - Term 147915 - 147963 -0.6 148 88 Op 2 . - CDS 147965 - 148576 576 ## COG2720 Uncharacterized vancomycin resistance protein 149 88 Op 3 . - CDS 148619 - 148804 347 ## 150 88 Op 4 . - CDS 148880 - 149221 369 ## Cphy_3526 hypothetical protein 151 88 Op 5 . - CDS 149218 - 149439 179 ## gi|254519005|ref|ZP_05131061.1| predicted protein - Prom 149462 - 149521 6.1 152 89 Op 1 . - CDS 149722 - 153018 4092 ## TherJR_0594 SMC domain-containing protein 153 89 Op 2 . - CDS 152954 - 153622 697 ## Dred_0582 hypothetical protein 154 89 Op 3 . - CDS 153619 - 155043 1689 ## Amet_2150 hypothetical protein - Prom 155068 - 155127 5.2 - Term 155119 - 155165 7.2 155 90 Op 1 36/0.000 - CDS 155355 - 158603 3765 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 156 90 Op 2 . - CDS 158605 - 159309 311 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 159332 - 159391 3.2 + Prom 159527 - 159586 5.7 157 91 Op 1 . + CDS 159622 - 159954 439 ## COG1695 Predicted transcriptional regulators 158 91 Op 2 . + CDS 159944 - 160624 655 ## Mbar_A1496 hypothetical protein 159 91 Op 3 . + CDS 160621 - 161397 351 ## COG1357 Uncharacterized low-complexity proteins 160 92 Tu 1 . - CDS 161616 - 163820 1988 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - Prom 163896 - 163955 6.1 + Prom 163964 - 164023 5.3 161 93 Tu 1 . + CDS 164047 - 166014 2193 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 166022 - 166061 8.4 + Prom 166073 - 166132 2.5 162 94 Tu 1 . + CDS 166153 - 166518 208 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 + Term 166532 - 166587 3.6 163 95 Tu 1 . - CDS 167164 - 168561 1048 ## gi|225377762|ref|ZP_03754983.1| hypothetical protein ROSEINA2194_03413 - Prom 168691 - 168750 4.8 164 96 Tu 1 . - CDS 168899 - 169030 172 ## - Prom 169138 - 169197 5.5 165 97 Tu 1 . + CDS 169400 - 171133 1921 ## COG4866 Uncharacterized conserved protein 166 98 Tu 1 . - CDS 171366 - 171818 661 ## COG3613 Nucleoside 2-deoxyribosyltransferase - Prom 171841 - 171900 6.2 + Prom 172017 - 172076 12.2 167 99 Tu 1 . + CDS 172311 - 173990 1826 ## ECO111_0322 hypothetical protein + Term 174110 - 174140 1.3 168 100 Op 1 . - CDS 174518 - 175321 610 ## COG2207 AraC-type DNA-binding domain-containing proteins 169 100 Op 2 . - CDS 175323 - 176168 826 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 176208 - 176267 8.0 + Prom 176465 - 176524 6.2 170 101 Op 1 . + CDS 176613 - 177470 691 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 177488 - 177525 4.0 171 101 Op 2 . + CDS 177535 - 179961 1548 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 180063 - 180106 6.2 - Term 180268 - 180302 4.0 172 102 Op 1 . - CDS 180306 - 180935 823 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 173 102 Op 2 . - CDS 180937 - 181824 781 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 174 102 Op 3 . - CDS 181821 - 182402 631 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 175 102 Op 4 . - CDS 182445 - 183308 614 ## COG1284 Uncharacterized conserved protein 176 102 Op 5 . - CDS 183289 - 184452 1048 ## COG0787 Alanine racemase - Term 184509 - 184546 2.1 177 103 Op 1 13/0.000 - CDS 184554 - 185396 843 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 178 103 Op 2 13/0.000 - CDS 185399 - 186160 873 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 179 103 Op 3 . - CDS 186232 - 186705 597 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 180 103 Op 4 9/0.000 - CDS 186754 - 187224 590 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 181 103 Op 5 . - CDS 187238 - 187675 531 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 188020 - 188044 -1.0 182 104 Op 1 . - CDS 188068 - 188376 446 ## gi|160916294|ref|ZP_02078501.1| hypothetical protein EUBDOL_02322 183 104 Op 2 . - CDS 188423 - 189625 1234 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Prom 189873 - 189932 7.2 184 105 Op 1 . + CDS 189964 - 190083 59 ## 185 105 Op 2 . + CDS 190119 - 192095 1548 ## COG0642 Signal transduction histidine kinase + Prom 192100 - 192159 1.8 186 106 Tu 1 . + CDS 192184 - 192810 502 ## EUBELI_00847 hypothetical protein + Term 192958 - 193000 -0.5 - Term 193046 - 193089 2.2 187 107 Op 1 . - CDS 193095 - 193787 692 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 193810 - 193869 3.9 188 107 Op 2 . - CDS 193882 - 194598 861 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold 189 107 Op 3 . - CDS 194595 - 195107 492 ## COG4720 Predicted membrane protein - Prom 195131 - 195190 7.7 - Term 195426 - 195473 1.1 190 108 Tu 1 . - CDS 195503 - 196066 492 ## COG0431 Predicted flavoprotein - Prom 196159 - 196218 7.6 + Prom 196043 - 196102 7.5 191 109 Op 1 . + CDS 196251 - 197156 1077 ## COG2378 Predicted transcriptional regulator 192 109 Op 2 . + CDS 197215 - 197880 822 ## COG4832 Uncharacterized conserved protein 193 109 Op 3 . + CDS 197911 - 198684 673 ## Dhaf_0028 hypothetical protein 194 109 Op 4 . + CDS 198656 - 200029 1265 ## COG1533 DNA repair photolyase 195 110 Tu 1 . + CDS 200162 - 200752 514 ## mru_0156 hypothetical protein - Term 200974 - 201004 -0.9 196 111 Op 1 34/0.000 - CDS 201053 - 201724 467 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 197 111 Op 2 31/0.000 - CDS 201735 - 202376 887 ## COG0765 ABC-type amino acid transport system, permease component 198 111 Op 3 . - CDS 202380 - 203150 887 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 199 112 Tu 1 . - CDS 203590 - 205185 1623 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 200 113 Op 1 . + CDS 205481 - 205705 160 ## gi|160914625|ref|ZP_02076839.1| hypothetical protein EUBDOL_00632 201 113 Op 2 . + CDS 205774 - 206004 177 ## + Prom 206791 - 206850 5.8 202 114 Op 1 35/0.000 + CDS 206931 - 208379 1449 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 203 114 Op 2 13/0.000 + CDS 208376 - 208954 421 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 204 114 Op 3 21/0.000 + CDS 208948 - 209967 1343 ## COG0547 Anthranilate phosphoribosyltransferase 205 114 Op 4 9/0.000 + CDS 209964 - 210731 893 ## COG0134 Indole-3-glycerol phosphate synthase 206 114 Op 5 23/0.000 + CDS 210703 - 211308 580 ## COG0135 Phosphoribosylanthranilate isomerase 207 114 Op 6 37/0.000 + CDS 211400 - 212584 1344 ## COG0133 Tryptophan synthase beta chain 208 114 Op 7 . + CDS 212577 - 213371 465 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 213580 - 213628 3.5 - Term 213518 - 213565 0.4 209 115 Tu 1 . - CDS 213795 - 215252 1031 ## gi|160914267|ref|ZP_02076488.1| hypothetical protein EUBDOL_00277 - Prom 215289 - 215348 8.0 + Prom 215242 - 215301 4.9 210 116 Op 1 . + CDS 215436 - 216029 483 ## BHWA1_02346 transcriptional regulator, TetR family protein 211 116 Op 2 . + CDS 216058 - 216726 508 ## Clos_0666 hypothetical protein 212 116 Op 3 . + CDS 216723 - 217136 465 ## HMPREF0424_0946 hypothetical protein 213 116 Op 4 . + CDS 217136 - 217561 362 ## HMPREF0424_0945 hypothetical protein + Term 217602 - 217657 3.7 - Term 217587 - 217648 1.4 214 117 Tu 1 . - CDS 217700 - 218362 719 ## CLH_1918 hypothetical protein - Term 218504 - 218538 0.5 215 118 Op 1 . - CDS 218561 - 218845 154 ## EUBREC_2865 hypothetical protein 216 118 Op 2 . - CDS 218875 - 219114 145 ## 217 118 Op 3 . - CDS 219185 - 219400 256 ## Lebu_1822 protein of unknown function DUF1703 - Prom 219454 - 219513 2.2 - Term 219491 - 219528 1.1 218 119 Tu 1 . - CDS 219531 - 219977 246 ## - Prom 220172 - 220231 6.3 - Term 220216 - 220256 -0.6 219 120 Op 1 . - CDS 220274 - 221164 1005 ## COG0642 Signal transduction histidine kinase 220 120 Op 2 . - CDS 221182 - 221568 427 ## 221 120 Op 3 . - CDS 221584 - 221934 370 ## gi|295098957|emb|CBK88046.1| hypothetical protein 222 120 Op 4 1/0.051 - CDS 221924 - 222841 249 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 222861 - 222920 4.7 223 121 Op 1 . - CDS 222933 - 223601 843 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 224 121 Op 2 . - CDS 223594 - 224397 642 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family - Prom 224420 - 224479 5.7 225 122 Tu 1 . - CDS 224652 - 224807 59 ## - Prom 224858 - 224917 2.8 - Term 224890 - 224950 5.9 226 123 Op 1 . - CDS 225003 - 225947 1132 ## COG3689 Predicted membrane protein 227 123 Op 2 . - CDS 225957 - 227087 957 ## COG0523 Putative GTPases (G3E family) - Prom 227129 - 227188 7.2 - Term 227397 - 227433 1.1 228 124 Tu 1 . - CDS 227486 - 228898 723 ## PROTEIN SUPPORTED gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 - Prom 229000 - 229059 8.7 + Prom 229043 - 229102 10.3 229 125 Tu 1 . + CDS 229134 - 229736 520 ## gi|160916291|ref|ZP_02078498.1| hypothetical protein EUBDOL_02319 + Term 229756 - 229803 5.1 + Prom 229774 - 229833 5.7 230 126 Tu 1 . + CDS 229870 - 231087 1055 ## COG4767 Glycopeptide antibiotics resistance protein + Term 231274 - 231310 2.0 - Term 231446 - 231483 1.2 231 127 Tu 1 . - CDS 231538 - 233460 2070 ## COG3711 Transcriptional antiterminator + Prom 233557 - 233616 6.4 232 128 Op 1 10/0.000 + CDS 233813 - 234121 463 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 233 128 Op 2 . + CDS 234183 - 234911 908 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Prom 234940 - 234999 2.7 234 129 Op 1 . + CDS 235038 - 235199 74 ## Pjdr2_5109 phosphotransferase system EIIC 235 129 Op 2 . + CDS 235172 - 235468 265 ## LEUM_0940 phosphotransferase system cellobiose-specific component IIC 236 129 Op 3 2/0.000 + CDS 235483 - 235812 306 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 237 129 Op 4 . + CDS 235814 - 237244 1598 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 237253 - 237284 2.1 238 130 Tu 1 . + CDS 237327 - 238778 1069 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 239 131 Op 1 . - CDS 238992 - 239234 168 ## 240 131 Op 2 . - CDS 239231 - 239734 210 ## - Prom 239780 - 239839 7.2 241 132 Tu 1 . - CDS 240650 - 241018 195 ## gi|167756421|ref|ZP_02428548.1| hypothetical protein CLORAM_01954 - Term 241060 - 241095 1.1 242 133 Op 1 . - CDS 241104 - 242009 936 ## COG2378 Predicted transcriptional regulator 243 133 Op 2 . - CDS 242011 - 242478 616 ## COG2606 Uncharacterized conserved protein 244 133 Op 3 . - CDS 242499 - 243005 564 ## COG2109 ATP:corrinoid adenosyltransferase - Prom 243032 - 243091 4.9 + Prom 243112 - 243171 4.8 245 134 Op 1 9/0.000 + CDS 243198 - 244190 1319 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 246 134 Op 2 13/0.000 + CDS 244209 - 245123 1357 ## COG4120 ABC-type uncharacterized transport system, permease component 247 134 Op 3 . + CDS 245133 - 245933 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 245949 - 245991 2.3 - Term 246056 - 246104 6.0 248 135 Op 1 . - CDS 246132 - 246698 519 ## COG3506 Uncharacterized conserved protein 249 135 Op 2 . - CDS 246695 - 247603 960 ## COG1737 Transcriptional regulators - Prom 247738 - 247797 3.3 + Prom 247618 - 247677 10.1 250 136 Tu 1 . + CDS 247796 - 248608 1059 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 248649 - 248704 9.9 + Prom 248650 - 248709 6.6 251 137 Op 1 . + CDS 248742 - 250574 1878 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 252 137 Op 2 . + CDS 250568 - 252301 1661 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 252383 - 252424 4.7 + Prom 252513 - 252572 5.5 253 138 Op 1 . + CDS 252592 - 253764 833 ## BF2854 hypothetical protein 254 138 Op 2 . + CDS 253778 - 254575 818 ## BCAH187_A3269 transcriptional regulator, MerR family + Term 254605 - 254635 1.1 + Prom 254579 - 254638 8.8 255 138 Op 3 . + CDS 254658 - 255998 1373 ## COG0534 Na+-driven multidrug efflux pump + Term 256199 - 256254 6.0 256 139 Tu 1 . - CDS 256422 - 257153 532 ## PROTEIN SUPPORTED gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase - Prom 257280 - 257339 7.8 - Term 257444 - 257490 6.4 257 140 Tu 1 . - CDS 257495 - 257695 338 ## COG2155 Uncharacterized conserved protein - Prom 257771 - 257830 6.2 + Prom 257630 - 257689 4.2 258 141 Op 1 . + CDS 257804 - 258814 1181 ## COG0280 Phosphotransacetylase 259 141 Op 2 . + CDS 258786 - 259337 203 ## PROTEIN SUPPORTED gi|229206079|ref|ZP_04332536.1| acetyltransferase, ribosomal protein N-acetylase + Term 259375 - 259410 0.2 260 142 Tu 1 . - CDS 259601 - 262225 2573 ## COG0474 Cation transport ATPase - Prom 262368 - 262427 5.2 - Term 262237 - 262275 7.0 261 143 Op 1 . - CDS 262442 - 263542 881 ## - Prom 263564 - 263623 3.3 262 143 Op 2 . - CDS 263650 - 264450 657 ## COG0789 Predicted transcriptional regulators - Prom 264497 - 264556 6.6 + Prom 264943 - 265002 7.8 263 144 Op 1 . + CDS 265199 - 265315 153 ## 264 144 Op 2 . + CDS 265319 - 265567 214 ## Ccel_3190 protein of unknown function DUF1696 + Term 265613 - 265647 2.2 265 145 Op 1 . - CDS 265725 - 266318 720 ## COG3546 Mn-containing catalase 266 145 Op 2 . - CDS 266322 - 266567 134 ## gi|223984791|ref|ZP_03634903.1| hypothetical protein HOLDEFILI_02200 267 145 Op 3 . - CDS 266570 - 266824 289 ## - Prom 266863 - 266922 3.5 - Term 266938 - 266999 4.1 268 146 Tu 1 . - CDS 267050 - 269608 2482 ## COG1511 Predicted membrane protein - Prom 269700 - 269759 9.3 + Prom 269664 - 269723 2.9 269 147 Tu 1 . + CDS 269818 - 270234 511 ## COG1959 Predicted transcriptional regulator - Term 270472 - 270522 7.5 270 148 Op 1 . - CDS 270530 - 270682 246 ## 271 148 Op 2 . - CDS 270726 - 271172 326 ## gi|169350724|ref|ZP_02867662.1| hypothetical protein CLOSPI_01497 272 148 Op 3 . - CDS 271169 - 271453 291 ## gi|225018668|ref|ZP_03707860.1| hypothetical protein CLOSTMETH_02618 - Prom 271490 - 271549 4.2 - Term 271618 - 271669 12.4 273 149 Op 1 1/0.051 - CDS 271800 - 273572 2258 ## COG1001 Adenine deaminase 274 149 Op 2 . - CDS 273622 - 275001 1486 ## COG2252 Permeases - Prom 275086 - 275145 4.8 275 150 Op 1 . - CDS 275155 - 276375 1091 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 276409 - 276468 1.8 - Term 276419 - 276467 4.3 276 150 Op 2 . - CDS 276471 - 276821 482 ## - Prom 276841 - 276900 6.2 + Prom 276930 - 276989 8.2 277 151 Tu 1 . + CDS 277182 - 277694 719 ## DSY1815 hypothetical protein + Term 277851 - 277889 -0.7 - Term 277922 - 277978 7.1 278 152 Op 1 2/0.000 - CDS 278094 - 278933 625 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 278964 - 279023 1.9 279 152 Op 2 . - CDS 279025 - 279528 317 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 280 152 Op 3 . - CDS 279617 - 280120 225 ## Dhaf_2020 GCN5-related N-acetyltransferase - Prom 280271 - 280330 5.8 - Term 280700 - 280737 -0.5 281 153 Op 1 . - CDS 280916 - 281371 586 ## COG0691 tmRNA-binding protein 282 153 Op 2 . - CDS 281386 - 282552 1353 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 283 153 Op 3 . - CDS 282570 - 284702 1350 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Term 284738 - 284771 0.7 284 153 Op 4 . - CDS 284776 - 285006 300 ## gi|160916279|ref|ZP_02078486.1| hypothetical protein EUBDOL_02306 - Prom 285032 - 285091 10.3 285 154 Tu 1 . - CDS 285233 - 287068 1495 ## COG0531 Amino acid transporters - Prom 287112 - 287171 6.8 - Term 287491 - 287533 4.1 286 155 Tu 1 . - CDS 287565 - 288863 1646 ## COG0148 Enolase - Prom 288897 - 288956 4.5 - Term 288905 - 288936 -0.2 287 156 Op 1 . - CDS 288967 - 289731 915 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 288 156 Op 2 . - CDS 289792 - 289983 348 ## - Prom 290052 - 290111 3.3 - Term 290181 - 290215 2.0 289 157 Op 1 . - CDS 290243 - 290794 748 ## COG0250 Transcription antiterminator 290 157 Op 2 . - CDS 290805 - 290984 245 ## gi|293400420|ref|ZP_06644566.1| preprotein translocase, SecE subunit 291 157 Op 3 . - CDS 290996 - 291145 208 ## PROTEIN SUPPORTED gi|237734017|ref|ZP_04564498.1| 50S ribosomal protein L33 - Prom 291171 - 291230 5.3 292 158 Op 1 1/0.051 - CDS 291238 - 291822 634 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 293 158 Op 2 7/0.000 - CDS 291855 - 292577 516 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 294 158 Op 3 8/0.000 - CDS 292574 - 292963 252 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 295 158 Op 4 . - CDS 292960 - 294297 1479 ## COG0215 Cysteinyl-tRNA synthetase - Prom 294326 - 294385 8.0 296 159 Op 1 . - CDS 294578 - 294766 350 ## 297 159 Op 2 . - CDS 294835 - 295959 1104 ## COG2199 FOG: GGDEF domain - Prom 295983 - 296042 9.5 298 160 Tu 1 . - CDS 296205 - 297218 780 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 297367 - 297426 8.2 + Prom 297198 - 297257 5.5 299 161 Op 1 . + CDS 297483 - 298052 629 ## COG0740 Protease subunit of ATP-dependent Clp proteases 300 161 Op 2 . + CDS 298117 - 298602 567 ## COG1607 Acyl-CoA hydrolase + Term 298749 - 298798 9.1 - Term 298742 - 298781 3.5 301 162 Tu 1 . - CDS 298851 - 299921 860 ## COG4974 Site-specific recombinase XerD - Prom 300067 - 300126 8.1 + Prom 300047 - 300106 7.6 302 163 Op 1 13/0.000 + CDS 300152 - 300973 745 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 303 163 Op 2 . + CDS 300963 - 302012 1001 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 302079 - 302115 1.5 + Prom 302102 - 302161 2.5 304 164 Tu 1 . + CDS 302197 - 302871 666 ## gi|160916256|ref|ZP_02078463.1| hypothetical protein EUBDOL_02283 + Term 302913 - 302966 1.4 305 165 Tu 1 . - CDS 303060 - 303734 537 ## gi|160916256|ref|ZP_02078463.1| hypothetical protein EUBDOL_02283 - Term 303754 - 303790 2.2 306 166 Op 1 13/0.000 - CDS 303856 - 304860 933 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 307 166 Op 2 13/0.000 - CDS 304850 - 305671 913 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 308 166 Op 3 . - CDS 305733 - 306209 432 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 306421 - 306480 7.4 + Prom 306455 - 306514 10.5 309 167 Tu 1 . + CDS 306631 - 307803 1071 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 307935 - 307980 4.0 - Term 308169 - 308209 1.4 310 168 Op 1 . - CDS 308216 - 308521 308 ## gi|169349452|ref|ZP_02866390.1| hypothetical protein CLOSPI_00170 311 168 Op 2 2/0.000 - CDS 308536 - 308964 614 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 312 168 Op 3 . - CDS 308982 - 310160 1291 ## COG2222 Predicted phosphosugar isomerases - Prom 310202 - 310261 8.7 + Prom 310161 - 310220 5.6 313 169 Tu 1 . + CDS 310348 - 310914 791 ## gi|160916249|ref|ZP_02078456.1| hypothetical protein EUBDOL_02276 + Term 310925 - 310958 1.1 - Term 311128 - 311160 0.9 314 170 Op 1 . - CDS 311161 - 312075 944 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 315 170 Op 2 . - CDS 312079 - 312345 380 ## 316 170 Op 3 . - CDS 312418 - 312972 537 ## gi|293400396|ref|ZP_06644542.1| putative thermonuclease 317 170 Op 4 12/0.000 - CDS 313010 - 313948 1076 ## COG1481 Uncharacterized protein conserved in bacteria 318 170 Op 5 12/0.000 - CDS 313951 - 314898 1110 ## COG0391 Uncharacterized conserved protein 319 170 Op 6 . - CDS 314903 - 315757 823 ## COG1660 Predicted P-loop-containing kinase - Prom 315781 - 315840 4.4 + Prom 316181 - 316240 5.3 320 171 Op 1 . + CDS 316279 - 316710 559 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 321 171 Op 2 . + CDS 316707 - 317624 1055 ## COG0524 Sugar kinases, ribokinase family 322 171 Op 3 . + CDS 317626 - 318546 1246 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 323 171 Op 4 . + CDS 318576 - 319991 1666 ## COG3069 C4-dicarboxylate transporter + Term 320030 - 320069 3.7 + Prom 320013 - 320072 2.6 324 172 Tu 1 . + CDS 320092 - 321093 830 ## COG1609 Transcriptional regulators + Term 321331 - 321365 -0.9 325 173 Tu 1 . - CDS 321182 - 322486 853 ## Predicted protein(s) >gi|312954455|gb|AENW01000053.1| GENE 1 5 - 574 550 189 aa, chain - ## HITS:1 COG:BS_maf KEGG:ns NR:ns ## COG: BS_maf COG0424 # Protein_GI_number: 16079857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Bacillus subtilis # 1 185 1 185 189 187 47.0 7e-48 MTRRLILASASPRRQELLQDLSYPFDIVAADCEEYFNRSLPIASAIEQIARQKALTVWEQ HPEAVVLGADTMVCYKDQMMGKPENREDAYRMLKQLSGKTHTVVSGVAIVWKGKAELFHE KTSVTFYELEEELLERYLDSNEPYDKAGAYGIQGMGKLFVRELRGDYFNVMGLPIAAVYR HLKAYLEKN >gi|312954455|gb|AENW01000053.1| GENE 2 567 - 1289 516 240 aa, chain - ## HITS:1 COG:no KEGG:Amet_3274 NR:ns ## KEGG: Amet_3274 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 17 227 13 222 229 106 31.0 6e-22 MKQLLEKLTTLAAYTAAVCTIVILLVTSININCFNKGFYKTEYASLETAQSLGMTEKDLN KATDALLDYLQDRRDNIDVTVAVKGTETKAFNARESSHMVDVRNLYRFAMVLRNVAIILL VLSLVYMAVRLKSGMLTIFSINYMKTAILAAVFFAMLAGWAYVDFDAFWTTFHKLAFRND LWLLNPATDLMINLFPAQFFSSMVFRIVGMFATGFIGLFVFCYLFLRHQLHKLHGELHHD >gi|312954455|gb|AENW01000053.1| GENE 3 1652 - 2086 527 144 aa, chain - ## HITS:1 COG:CAC1234 KEGG:ns NR:ns ## COG: CAC1234 COG4492 # Protein_GI_number: 15894517 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Clostridium acetobutylicum # 2 144 13 155 155 127 43.0 9e-30 MEKYYIVDSTILPDVLDKVIEARSLLQNGEVKQVSEAVKRVGISRGTYYKYKDYVFLPAQ GMSERKAVISLMLHHDKGILSEVLNTMSSVNANILTINQNIPIHEWASVVLSFDLCEMAV SIDELLERLRSCRGVSNLRLIAVE >gi|312954455|gb|AENW01000053.1| GENE 4 2086 - 2967 1017 293 aa, chain - ## HITS:1 COG:CAC1235 KEGG:ns NR:ns ## COG: CAC1235 COG0083 # Protein_GI_number: 15894518 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Clostridium acetobutylicum # 1 258 1 261 296 189 37.0 5e-48 MVKVRVPATSANLGVGYDCLGLALDDFATVTFEVIAEGLEIAGCEEAYCNEENLFYQAFV KGLQYMGESVSGIRITVDTDIPYARGLGSSATCIVAGLAGANALFHNRMNRYELFDLATQ MEGHPDNIAPAIFGGLCVSFMEDGKPNMIRYGVKRDLLFVTMIPDYEVSTKAAREVLPDT MRYRDAVYQMGRCAALAKAMEIGNAMIMRKACTDQMQEPYRKKLIMEYENVRSLCRETDM ITMYISGSGSTMIALTQEEAAARVLVEKIKNQYPSWDARILRATYDGVQSEVC >gi|312954455|gb|AENW01000053.1| GENE 5 2960 - 4453 1612 497 aa, chain - ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 5 489 6 492 496 464 48.0 1e-130 MEKIYTSTRNKALARTPKEAVVKGIAEDGGLFVYDALDTLRLPLQDMMQMTYEQMAETVL QLLLPDFTEEEVKDCVENAYKGKFRDEHITPLHKAGNTNILELFHGPTCAFKDVGLRMLP QLMSKSLQQHPDEHVMILTATSGDTGKAALEGFLDVPRTGITVFYPDEGVSNIQRLQMIT TKGSNTCVCAIRGNFDDAQSNVKRIFQNAQLSARLKEKGITLSSANSINIGRLIPQVVYY VYAYKEMVRTKEITFGEKVNFCVPTGNYGNVLAGYYAKLMCLPVNKFIVASNSNNVLFDF LKDGVYDRNRPFYKTISPSMDILISSNLERLLYYKSGKDADYIAQLMNELEATGRYQVRE DIFTSVREDFAGGYCDDAACAQSMREFYEQSGYVMDPHTAIAYKVMKDYEKEDSMHKCVL LSTASPYKFAPAVYEALFNETIQDEFACMEMLQQKSGSAMPKPLAELAKMDILHSHLIDK DDMPSFVETIGEEIFHG >gi|312954455|gb|AENW01000053.1| GENE 6 4571 - 5752 1437 393 aa, chain + ## HITS:1 COG:MTH1232 KEGG:ns NR:ns ## COG: MTH1232 COG0460 # Protein_GI_number: 15679243 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Methanothermobacter thermautotrophicus # 1 304 1 315 423 229 40.0 7e-60 MNIAILGYGTVGSGVKEIIDHAVTKSTKQLHVSYILIRKGKAKTLPYMCDDIQTILQDTS VDVIVETMGGLEPAHTYILQALKSGKHVVTANKAVIAAYLKEFTDVAREHNVRIYYEAST GGGIPWIEGLAKAMRIDEVDRIHGIFNGTSNYILDHMQRYHASFEDILKEAQELGYAEAD PSADIDGYDICNKLRISASLAYDYHVPDTFPVFGIRNITKQDVSYFSSLGYAVRLIAKTR RNANRYGCVVEPVLFEAGSLESNTQDNYNLITLHGKTIGDLKFFGQGAGKLPTANAIVQD LIDLKEGVCHMDPSFTNTMSYDETLCLRDYILRADEAARDELQDFSYEVKTFEGQEYLHI QKAEVYEMHQVMERMLKTDVHAFMASIYEREDD >gi|312954455|gb|AENW01000053.1| GENE 7 5757 - 7067 1509 436 aa, chain + ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 4 434 5 436 437 414 50.0 1e-115 MMKITKFGGSSVANAQQFRKVKHIIESDPARRFVVVSASGREHKKDNKVTDLLYLIEAHL KYSVDHLSLFHLIEERFISIKNDLGLSYPIEEDLAKLKGQLNKTMSTDYLVSRGEYLTAK LMAEYLGFPFVDAKDIITFRYDGKIDFDATKYRMDNTMKKLDRFVIPGFYGALPDGTVRT MSRGGSDITGSILADILNADMYENWTDVSGILMADPRIVHHPKRINTITYSELRELSYMG ASVLHEEAIFPVKEKNIPINILNTNHPEEGGTIIVEKDDHPSEQMITGIAGKKNFTVIAI YKNHMSDEVGIIRRALEICENYRISIEHIPSGIDSFSIVVNSEDVKDIIYDMVGDMKKAC NADEIKIIDNISLIATVGRQMMYRPGISGKLFAVLGKNNINIRMIAQGTDEMNIIVGVEN KDYEKTVETIYNNFVV >gi|312954455|gb|AENW01000053.1| GENE 8 7133 - 8158 1315 341 aa, chain + ## HITS:1 COG:aq_1866 KEGG:ns NR:ns ## COG: aq_1866 COG0136 # Protein_GI_number: 15606903 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Aquifex aeolicus # 4 335 3 337 340 328 53.0 1e-89 MKTYKVAILGATGAVGQEMIKILMERSFPIRELHLLASARSAGKKLTIADKEYIVEETTE NSFDGMDIVLGAAENDIAEKYLPIAAEKGAVVVDNSSAFRLDEQVPLIIPEVNPQAVREH HGIIANPNCATIIALVALQPLHAYANAKRMVVSTYQAVSGAGVNGIRELNQQVGALAHGK EVAVNTFQYQIAYNLIPQIGGFNEAGYSSEEMKMQNEGRKIMSNPELCVNCTCVRVPVIR SHSESIMVEFEKEISVEKARELLQGAPGVKLVDEPQKQVYPMPLDTTDQDLVFVGRIRED MSGHANALSFWCCGDQVRKGAATNAVQIAELVIQEKEKQQE >gi|312954455|gb|AENW01000053.1| GENE 9 8374 - 8571 145 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYGDRGICEYADRIQDLNLHWETVNRLQFHFIRNACHMPMLEQCEDTYRCIENILYAAT DKPAG >gi|312954455|gb|AENW01000053.1| GENE 10 8617 - 9015 419 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400496|ref|ZP_06644641.1| ## NR: gi|293400496|ref|ZP_06644641.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 132 6 136 210 95 40.0 7e-19 MLQGLYCTSKLWKQAASCLKEHDLLFMEYPHEVTSQAVQVMDLASWIASQLPRDIDVIIG HSMGGILALQLVHDVGVPVKCVICIESNLCPAEPFYRNLVMKQSMTTLGAKLQKEMAKEA VWYQDTLAKQLQ >gi|312954455|gb|AENW01000053.1| GENE 11 9041 - 9802 635 253 aa, chain - ## HITS:1 COG:PA1415 KEGG:ns NR:ns ## COG: PA1415 COG0491 # Protein_GI_number: 15596612 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pseudomonas aeruginosa # 4 228 9 236 242 97 27.0 2e-20 MKDWFQVEMLDDTTYVISEHKHYEKTNCYLLLGKQRALLIDSGLGVADIRKITDQLTALP VTVIATHVHWDHIGSHGSYTDVLVHEREYSWLNGKFPLPLGVVKQQLMKEPCSFPGDFHM NAYTVWQGHAGIVGDGDILNLGGRHIRVLHTPGHSPGHMCFFDLEREWLYCGDLIYKGVL YCDYPSTDPQAYLLSVQRLQTLALQRLLPAHYTIEVGPSLIQETAQAWEELQEKGLLQHG SGEFRYENFSIRL >gi|312954455|gb|AENW01000053.1| GENE 12 10071 - 10427 499 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401831|ref|ZP_06645972.1| ## NR: gi|293401831|ref|ZP_06645972.1| hypothetical protein HMPREF0863_02112 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 102 2 103 129 95 48.0 8e-19 MKTKKEMKISKASIVFYVASVIFLAIAAFEIYQAYLTVESYKTTYTLQLTDILNLYFTGC VPYFGFAFLAYGIGEVLKKINDLTSTLRLCIEDVIEEEVEEEAEEFVSEPVANEMKNA >gi|312954455|gb|AENW01000053.1| GENE 13 10804 - 10983 98 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVHSMQIIIFALFETAAAFYMNKNQASISASQINSLIFKRIRVSSPFLILLYFLNSRLS >gi|312954455|gb|AENW01000053.1| GENE 14 10994 - 11782 674 262 aa, chain - ## HITS:1 COG:PA4800 KEGG:ns NR:ns ## COG: PA4800 COG0500 # Protein_GI_number: 15599994 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 4 199 8 198 266 95 29.0 6e-20 MSYIEKNKEAWEEAFDNRINGWGDAVVENLQASSAYYIQPALQAELDQLNLAGKHVAQFC CSNGRELLSISRHYGAVGTGFDIAENLIAQGKMHAKQLHVPCSFSAMNILDIGSEYHQKF DVILFTIGAITWFQDVNALFRVVSDCLKPKGIMLIHDFHPLMNMLPLPGEDCYCDDVVRL LEHKYFTAEPWIENNGMGYISGDYASKTFTSFSHSISELVNSTIQSSMSVRLLNEYDYDI GLSDVYDAMGLPLSMLLMAEKV >gi|312954455|gb|AENW01000053.1| GENE 15 12373 - 13137 592 254 aa, chain - ## HITS:1 COG:no KEGG:CKR_2198 NR:ns ## KEGG: CKR_2198 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 1 254 1 254 254 139 32.0 1e-31 MKGFTAFMKKELLEAVRSYKLVILLIVFAALGFMNPVSARYLPELVAGFLPEGMHMEIPQ PVVLDSWLQFFKNTAQIGLIAIIIMCSSSMANEIGKGVLIPLLAKGMPRNSVLAAKFISI SCLWTLSLGCSFLITFLYNFVFWESSLVPHLFPLVTGVWLFGLMMTASMILGGVYKGTVS GSLLCAGCLFLLCVLITMFAAVADYSPFVFLSQYQSYLTDGITMQEFLKPAVCAVTATLL QLAAAVIIFRRKSL >gi|312954455|gb|AENW01000053.1| GENE 16 13134 - 14045 310 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 2 303 3 303 311 124 28 6e-27 MDVLTLRNLHKAFGRQKVLQGIDLTVPQHSIFGFIGKNGAGKTTTMKTILGLEKADAGEL YIMQEPVVFGNTRTNRYIGYVSDVPEFYGFMTAWEYLQLCAEISGLAAQKVKTRIDELLQ LVGLSETGKKRCATFSRGMKQRLAIAQGLLNEPKLLIADEPTSALDPQGRKEILTILEKA KEKTTVLFSTHILSDVESICDSIAILHEGKIAVSGNLHELLQMKGTASLYVETECEEECS LLLEALRKRGIAVQQTHPYAVQLPDHMETQQQVLAIVNAQGLRLQRLERMRPTLEQYFLE VTK >gi|312954455|gb|AENW01000053.1| GENE 17 14048 - 14248 358 66 aa, chain - ## HITS:1 COG:no KEGG:Cthe_1537 NR:ns ## KEGG: Cthe_1537 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 4 66 6 68 68 66 52.0 4e-10 MDTLMEYLPALLPLILLELGLAIFALIHLIRHPQVRIGNKWIWIPVILFLQFLGPILYIV IGREEQ >gi|312954455|gb|AENW01000053.1| GENE 18 14248 - 15351 1278 367 aa, chain - ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 14 118 11 116 125 67 32.0 4e-11 MTTIRLGKKLIALRRDANMTQEELAAYMGVSKSSVSKWETETTLPDILLLPQLATLFNVS VDELIGYEPQLSMEAVNKLYLQLSAEWSRDSANAYAHSEELIRKYYSCFPFLLQMAGLYL NHYMLHEKPELVMKRSEELCDRVIAESEENSLVKDAISLKITYLITSRQPQKALQLLGEE AKPIAQDSEMIAACYQMLGKPKQSSRIFQICIYQHLLFVIQDMANYMMMNTEDEQLCDET MHRMLELLKLFHIDALHTITSTMVYMSCAMVYAQRRDKESALRMLERLIDVIIRYDLAHM KIHRDTYFTEVEAWMESLQLRTQAPRDGGVILDSLIQELQPPAFDFLKGEPRYQACLQKL KAEKERA >gi|312954455|gb|AENW01000053.1| GENE 19 15871 - 16653 856 260 aa, chain - ## HITS:1 COG:lin0288 KEGG:ns NR:ns ## COG: lin0288 COG2723 # Protein_GI_number: 16799365 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 10 260 236 485 486 283 54.0 2e-76 MTTERCVLAAHEIDETLQVGNMQSKQVYYPKTCSPQDNLQQLFDTGMDLLFPDVQCKGEY PYYMKRFFEQNNVVLTMQEGDEEVLKKGTVDFMSFSYYSSIVSGYNGDSLKLHTSNLMGA EKNKYVEYSAWDWAIDPIGMRIALNHMYDRYHLPIFISECGFGAYDQVEADGMVHDDYRI DFLQKQLTQVKEAIRDGVEVFGFTAWCPIDLVSQTTSEFSKRYGFVYVDLDDYGNGTYER TPKKSFYWYKKVIASNGEEL >gi|312954455|gb|AENW01000053.1| GENE 20 17797 - 18843 321 348 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 21 321 17 319 345 128 30 3e-28 MRKRNGVNHEKKVAEFSQGAVYAYTIQNEAIHMTALNFGAVITELKTSDRSGNMENVVAA FSDIMDYERQQGPYLNAVVAPVAGRIAYGSYSMENTVHQLSINNGCHHLHGGTGGISRQL FHVEEEEQALHFHLECRHDMDGFPQGTYRYDIWYRLSGNNLIIEYHGTPPQKSLMNMTSH MYFNLSGNLRESILQHDLRIDSVEKLKIHPDGHPFEKEKIEAGSAFDFRNLTPIQKRYEL GHPEFQYTRAYDTPFLLGPNGITLYHAGSGRRLDMTTDAPSLVLYSANYFDDENLVLNHH RRGEAFIALALETQDLPNGVNIRNAEVHPFYDARHPYKQKTVYTFSHM >gi|312954455|gb|AENW01000053.1| GENE 21 19103 - 20272 1238 389 aa, chain - ## HITS:1 COG:FN2107 KEGG:ns NR:ns ## COG: FN2107 COG0153 # Protein_GI_number: 19705397 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Fusobacterium nucleatum # 1 386 1 388 389 463 59.0 1e-130 MKKRLIKEFTDIFEVPGEALFFSPGRVNLIGEHTDYNGGMVFPCAITFGTYAVVSKRTDS CMRLFSNNFKEKGIIDVALQTLHYDKKDDWANYVKGVLYFLQQEGFEIPCGLNILIEGNI PNGAGLSSSASLEVLTGTILKETFQLPISKLDIIKLSQKAENQFVGMNCGIMDQFIIGMG KKDHAIALDTGTLEYTYAPVQLKQASIVIMNTNKQRGLTDSKYNERRAECEHALSQLQTV VKIKNLCDLKETEFEKVQHIITSPVERKRARHAVLENIRVKKAIAALEKNDIEEFGALMN ASHISLRDDYEVTGIELDTLVESAWNQSGTIGARMTGAGFGGCAIAIVRNDDIEDFTAAV RREYTQAIGYEPDFYIASIGDGAGKLAEL >gi|312954455|gb|AENW01000053.1| GENE 22 20693 - 21586 490 297 aa, chain + ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 4 291 5 288 291 141 28.0 1e-33 MQIITDETKKEIKAHGSHTFPLLVSYEKITAYDSGSFLWHWHPEIEMTLITSGEMLYRIN HQEYHVKKGDALFCNANALHAGTMYHEQDCTYISVTFDSRLLSGFEGSLIHRKYVKPLVN DLSLSSFCFNGSAPWHSAITAAIQHIALYDEEKADAYELAILMELYTILETLHLHMHPAR KLSTSDMLNYDRIRTILLYVENNYNRELTLHDIAGQIHVCKNECCRIFKSYMHQSLFEFI LEFRIEKSIGFLMNGSYSVSEISQLSGFNDSNYFSRAFKKQKGCSPLQYRKKMKTQG >gi|312954455|gb|AENW01000053.1| GENE 23 21672 - 23618 1505 648 aa, chain - ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 5 439 4 430 505 142 24.0 1e-33 MNKKQLEMIRFLSIHNRPMSGKELANALKVTPRSIKNYVHEINGLYGKSIIASSRNGYEL HTNTVSSLLAALDDQKIPQTQEERSFYIIKQLMLHHHSGLNVFDLSDMLCVSYSTVKTVI YKMNKIFSAYHIAFPCENDCVYMQGSEKDKRRLMSYVINEEAKNSYINLDLLRKNFDSID IDALQTIIYQTFKKYTYYLNDFAALNLLLHLLIMIDRELNGKELDSGQTDFTFTSSQEEA FLSSLRQQIEQRFGIAFNDYEYFELYMLFRANANFSLDVSSTALKNAVGEDVLALTREYV RMIDNLYMIDLSANTFITPFALHLKNLIFRAKTGRSTKNPMTQAIKNNSPIVFDIAIYIA LDLMDRYHFMVNEDETAFLAIHIGAEIERQSANIYKIPAILICPDYHDMASGILNTMMMN FGNQLNLIGSVTDETQCREKLREQRIAIVFSTIPLTQHAYYANSKVVQISPINLTSQFDR IQSVISKELEEEKNQKLCVDFHTFFEKDLFLYEPATASREQILQLLCAALTEKKYVNSDF YDNVCRRENAATTAFGGIAIPHAVEMDAMKTSIAVAISKNGIQWGSNTVYIIFLLAINKA DKREFRSIYESLISLFSEPAMMPLIRSCTGFQDFEKMIYSSIHPEKYP >gi|312954455|gb|AENW01000053.1| GENE 24 23825 - 24136 472 103 aa, chain + ## HITS:1 COG:BBB06 KEGG:ns NR:ns ## COG: BBB06 COG1440 # Protein_GI_number: 11497017 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Borrelia burgdorferi # 4 98 1 95 105 68 34.0 3e-12 METLKILLCCGAGMSSGFLASSARKTAKKKKLNVTIEARSASEANELLSTIDVLLIGPHY AKEINKFQELANPHGVAVALIPKDIYGSLDGERLIAFAQTLKN >gi|312954455|gb|AENW01000053.1| GENE 25 24248 - 25489 1190 413 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 408 1 434 444 134 28.0 4e-31 MNTFMNWLADSFVPKSNKILSKPWISALGSTMQKVIPFILTGSVIFLYNVLVSFFPSLPD LGPISDFSFGIISLIVAFTIANQCMEKLGHPSYMINAGIASIGVFLMVAIPIGEDADSIS ALMNHVSASGIAVAMITGLFTSIIFHLWAKLQFLKDSSIPDFVSSWINTVVPNLISLGVI MIMVKLMEVNVYAAIISIFTPLIQIGQTLPGLVLMCFTLAFFYTLGISSWTFNAITTPIL MAGVQANLEQIAAGQAATHIVSHTTFWSISFITMGGVCATLALNVLMCFSKSKQLKMLGK VFLVPSIFNINEPLMYGAKVVFNPLLMIPAWINAIVGPVYVWVIMSLGLLNIPAQMMEIG QVPAPISSVLATQDIRAVLWWIILFLIYGMIWYPFFKVYEKQKLKEETTAAVE >gi|312954455|gb|AENW01000053.1| GENE 26 25517 - 25843 333 108 aa, chain + ## HITS:1 COG:BH0910 KEGG:ns NR:ns ## COG: BH0910 COG1447 # Protein_GI_number: 15613473 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Bacillus halodurans # 3 100 4 101 110 64 41.0 5e-11 MNEQNELLTAAMQIILHAGNARNAADEALEEAKRFNFQEAASHLQKAEEAITLAHKSQTD IIQKEAGGYGYEPSLLFAHAQDTLMTIKSELHLSRQLIDVLKIIKNNK >gi|312954455|gb|AENW01000053.1| GENE 27 25935 - 27380 1320 481 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 12 481 11 481 483 543 55.0 1e-154 MIIKQHDSHDKFLWGGAVAACQIEGAYDVDGRGLSTSDLRAYDPNLKRADIKKEGGDTLA GIKAAMQDSISYFPKRYGIDFYHTYKQDLALLKELGLQAFRTSISWSRIFPKGDEKEPNE KGLQFYDQLIDEIIKNGMEPIITMSHYDFPIHLVTEYGGFANRKVIDFFVNYAGVLLRRY KGKVKYWIVSNQVNLVPAVQFGSLGIYEDQSEHMEELMYQAVHHQFVAGARVIQLAREVD PDAHMGTMVADGTFYPATCKPQDVILTMKKNRMQYYFTDVQLRGEYPGYALRYFKDNDIH LNIQEQDKKLLKTYTMDFLAVSYYYSKIVDSDKNTMKPFDGEQNPFLKPTPWEWRADPLG LYNCLSQYWDRYEKPLMIAENGLGALDVVEEDGGIHDTYRIEYLRQHIIQVQECRKDGVD ILAYLSWAPIDMVSSSSAEMSKRYGYIYVDLDDYGKGSGKRLKKDSFYWYQHVIKTNGKE L >gi|312954455|gb|AENW01000053.1| GENE 28 27599 - 28789 759 396 aa, chain + ## HITS:1 COG:lin0460 KEGG:ns NR:ns ## COG: lin0460 COG4908 # Protein_GI_number: 16799536 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a NRPS condensation (elongation) domain # Organism: Listeria innocua # 26 365 33 402 427 106 24.0 8e-23 MKYSAGMLDLLEALTLPEQPVLFLKLTIQPHICMERLKDAVSQCIAFLPELALRYDEKHN CWRKQKDDTFSMIQEVEDFDFSSWDIEHHAQLCIQIIHKEQQDLVCIGYSHILCDGDGAT QILRLLTACYRQETVSFQNCRTPESLPIIKLKKIKTKRRKTIPAALPFAPHPLHTSELHQ SIPRKLLQQICPSACTVNDVLLCAYAQTLHSISAANAVTIPCPVNLRSYLQKKPSWSIAN FVGDFQVTLHGLDHRDWRELLADVHQQMQEEKARCSDLHTIQLLHPIMKHLPLAVTKAVA KAGFHSPEISYTNLGKIDAASIYFDDCTITQLYLLGRARIYPSFQISVSTWKDTCTLACH VTGDTLQLMHAQKILTTMCRLLHTYAGQPVSESKTE >gi|312954455|gb|AENW01000053.1| GENE 29 29035 - 29181 92 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEKVFYRIIMAAAFVLTVCSLLTHNDWILLLTAIFMACCVIITFIKK >gi|312954455|gb|AENW01000053.1| GENE 30 29327 - 29866 351 179 aa, chain - ## HITS:1 COG:lin0638 KEGG:ns NR:ns ## COG: lin0638 COG1335 # Protein_GI_number: 16799713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Listeria innocua # 1 175 1 175 175 206 53.0 2e-53 MVLLIVDTQTMIMNEALYEFQLLESRIKTLIAQARRHGVEVVYVRHDDGAENALTKGAQG FDIYDEFKPLCGEKIVDKNVNSAFKDTGLTEYLRDKGEDTIMITGLQTEYCINATIICGF EHGFHMIVPAYTNSTVDNDYMSAKKTYDYYNNFIWKNRYASCVPFERALEMIKQNMLCR >gi|312954455|gb|AENW01000053.1| GENE 31 29936 - 31153 1310 405 aa, chain - ## HITS:1 COG:BH1174 KEGG:ns NR:ns ## COG: BH1174 COG0477 # Protein_GI_number: 15613737 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 34 402 28 392 399 96 22.0 7e-20 MNNSSMKSFLSKYHLQLFFFAVALESLAANFAHPITPTLIQNLQLPDYSFGMLYAGMAFT NFLFSPFWAKQVTRMGSRRVLGICCVGYGIGQLLFAIMKTLPTIMLARLLSGFFVGGIMV SFLTYIIHTSTMENRGRYLALSATFTTVFAAFGYLIGGFAGVVSIPLTFALQSGVLILCG MLFAICLREDREVTGKSVSIWKEANPFQAFLDARRFMTLTFAVLFFAVFLTSTATTAYDQ NFNYFIKDQFHFNSSYNGMLKAVVGFISLFANTTICVWIMKRTNVKKSVIYVLGGAGVTL IAITMLEDILPFILINIIFFALNAIYIPLLQDLCASASSAEHSSMVMGFYNAMKSLGMIA GALFAGFIYAAGPRLSFLYAGIFFLISMLAAIWYYRRSGRNRENA >gi|312954455|gb|AENW01000053.1| GENE 32 31278 - 33470 2383 730 aa, chain - ## HITS:1 COG:slr1692 KEGG:ns NR:ns ## COG: slr1692 COG2200 # Protein_GI_number: 16330979 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 461 717 57 309 332 152 32.0 3e-36 MNTQIWKEDTENQLGAMRIGVCKYLLNEEFSTLWANDTFYTMCGYSEEEYHILFHDSATL FFQQTPKDFEKLKEIVEHAYRNKSQQYECFCRLPVKGGSCLRIHMTGTFAEEQIDGIPVV YVVYTDVEDMMRIRQNLEQEHERLNLALQMEMKTVSCIRLMYISNDMQSYMDQLLKEIGE FMHAERAYVFELQNGCMNNTYEWCSDGVESSMEFCQNMDVELLAIWKDFIEQGKNVSIPD VERIQKSFPQTYEVLHVQNIHSIALSPIVQNNKSIGFIGVDNPAPDYMRNFSMLETISYF MSVAMEKKDLNDRLLHNSYYDDLTGVYNRNRYLQDLNQLNGRQIPLGIVYMDINGLKDIN DHLGHTYGDKVLTEGASILKKVFNTGAIYRIGGDEFVVFVQGMQEQEFLEQVGILKQAII GSANCKGAIGHIWTSTCQDISSRITDADEYMYQDKMQFYRKNPNSNRYRCCNDTVLQLAD RSVLMQALENQRFEVYLQPKVNFRKELIGGEALIRYHDETGTLIMPNEFIPSLEEARTIR YLDFFAFEQVCRLLSRWHAEGRRLTPLSVNFSRYTLRMADFLGELERIWGNYNVPKQYLE IEIIENDESLDNEFLIMIMERIKRQGYSISIDDFGARYSNMALFINAQLDTLKLDRSMMQ DLQNNRRSQMLISSLVQICHNLQMQLIVEGVETKEQFDILKQLDCDGLQGYLIDRPIPVS MFEQKYIKQK >gi|312954455|gb|AENW01000053.1| GENE 33 33597 - 34127 335 176 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1331 NR:ns ## KEGG: HMPREF0868_1331 # Name: not_defined # Def: acetyltransferase, GNAT family # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 3 173 4 168 169 186 57.0 4e-46 MLLRYQNLTIRDAVVQDAGQLAQWWNDGRVMAHAGFPNGTGETVQEIAETIKNCDTSHRL LMIEMDDIAIGEMSVRWKADATAAIGIKLCDASRQNKGIGKVLLSMLISSLFHEQGCHRI ILYVNLTNTRAQHVYEQLGFTRVRVNENSWTDQLGRQQSSVDYVLYQKDFISYLNG >gi|312954455|gb|AENW01000053.1| GENE 34 34250 - 35065 714 271 aa, chain - ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 19 271 26 270 272 213 41.0 4e-55 MRTETIQIQLQGKATGAVLQTYFMDASKELLNSTRRPAVLLMPGGAYRYTSDREAEPLAI RLNAMGLQVAVLRYSCAPAAYPRALLEAAAAFQLLKDNCTAWNIRQDRIFLMGCSAGGHL AASLGINWNQPIITQYIQRTDLRPFAQILCYPVITAGAYAHEESIQNLLQEHAEDEQLRN HVSLELQVHKDVPRTFLWHTYTDPTVSVQNSLLFASALVKKGVLCEFHMYDKGAHGLSTA GRLSQRADGEKLQPECEGWMSLLETWINAIL >gi|312954455|gb|AENW01000053.1| GENE 35 35113 - 35538 530 141 aa, chain - ## HITS:1 COG:AF2264 KEGG:ns NR:ns ## COG: AF2264 COG2050 # Protein_GI_number: 11499845 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Archaeoglobus fulgidus # 2 133 17 149 154 73 29.0 1e-13 METMDELKKRLNSSSQYLQSNDMQVVEVKEGYAKVEMIIDEQILNVHGFVHGGALYSLAD TAAGAASFTSGRDSVTLSGTINYIKPGRGGKLIGIAQKISAGRTTGVYEVFIFNDEDVLL SRATFTMFFLDQERYRKGSRK >gi|312954455|gb|AENW01000053.1| GENE 36 35968 - 36735 812 255 aa, chain + ## HITS:1 COG:BH0826 KEGG:ns NR:ns ## COG: BH0826 COG1349 # Protein_GI_number: 15613389 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 226 1 219 251 123 37.0 4e-28 MLTKERFFRILELLDHKSFITIQELMEVLNASKSTVNRDLIELEKQGLIQRERGGAIKKE MPATLSSYRELPVMDKEHIHSAEKDMICAQAAAIVKDGDCVYVDSGTTPSYLIPYIAGKN IKLVTSSIYALRKLPASFPGELFLIGGKYDMRYDMSVGYLTTEHIRKFHFDHAFFSASGV ELDSQEVLAIDFTISEVKSTVLQRSRSSHLLIDDSKLSIRALCTWAVLSDFQDVYINAFE AMREMELPQHFIICK >gi|312954455|gb|AENW01000053.1| GENE 37 36859 - 37419 519 186 aa, chain + ## HITS:1 COG:CAC0325 KEGG:ns NR:ns ## COG: CAC0325 COG1971 # Protein_GI_number: 15893617 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 3 167 4 185 204 107 36.0 9e-24 MHVLSALLFAVSANIDCLAIGLSYGIQSVKIDARSNLIIAVISTAGTLISMLAGKPLAAL CSADTANRIGAVLLMLIGCWILFQNHRTQQKSLKAYDRDASSRIDQKEAVVLAFALTINN MGLGISGSITGLPIPVTCLFTFLCSLLFIAVSQVAGKSCIAYFIHKYARDTAAWMIILLG ILECCI >gi|312954455|gb|AENW01000053.1| GENE 38 37527 - 38378 791 283 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRLLLWVSTLLFLCTALLLGGAVTLRQVKEQGMSALVVSHLDIKEPLKDALEQVPGGFL LEQSILQQLDTLQENLQKQADWTSFLDTAGLTFIQCVADETAQLPDLDAQFSELLSKEQT ALFQNINLTASQQKLLLQILTRQLHLNTRLSALAEDTRASLSVPALLAVRLVQFGMQNDT IRLLCGAMLVSFVSMLVSASGRYRAFRNAALSCLLAALLFLCISYVLPLLVRISYVQMEE LLHTALQQLRVLAVWYLGAFASLALLSFIMKKVCEADFIHTRW >gi|312954455|gb|AENW01000053.1| GENE 39 38375 - 39496 1143 373 aa, chain - ## HITS:1 COG:aslB KEGG:ns NR:ns ## COG: aslB COG0641 # Protein_GI_number: 16131652 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 4 363 8 393 411 175 29.0 1e-43 MHMKTLSFLVKPVSAGCQLNCTYCFYKDIAENRSSANYGRMRNEVAVALLEKVFQAADAD ADITFAFQGGEPLLAGLPFYEQFADAVKQLRQPKQNVRYAIQTNGCLLNAAWCSFFHKHN VLVGVSLDGWRKQHDLYRKRKDAGTYADVMRAIQLLRRHHVDFNILSVLSRQLAREPKKL FAFYKKHGFSHVQLIPCLAPLQEKQSAYSLTPELFYQFYRSYFDLWIQDVENKQYQSVAL FDNLLLLLQGKTPGTCGMLGECQFQYVVESDGSLYPCDFYVLDEYHCGNVLDTDLLAARD CSRAKAFAYREEPQLCAACPFQPMCHGNCKRLRSVFMNETQCGYQRFLLYAYPKLKEVVE IGAGRKKRREVTG >gi|312954455|gb|AENW01000053.1| GENE 40 40006 - 40986 1198 326 aa, chain - ## HITS:1 COG:CAC3400 KEGG:ns NR:ns ## COG: CAC3400 COG0673 # Protein_GI_number: 15896641 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 1 322 1 322 322 370 55.0 1e-102 MKKWNWGILGQGAIAVQMAEALMKEHGTIYAVAGRHMEKVTAFASAYTVEHCYDIESLLA DEQVDIIYIATPHTYHYDYMMRALQHGKHVLCEKAITVNHRQLQEAMALAQKKQLILMEA MTIFHMPVFAKAKELVEQGAIGKLKMIQVNFGSCKEYDVTNRFFSPQLAGGALLDIGTYA LSFVRWFLHAQPDTVLTNMIPFETGVDEMSGIILRNSLDEMATVTLTMRAKLPKVGIVAG EEGYLEIREYPRADSLQIRYTRDGWTETLDAGTRSDALVYELRDMEAAVSATANNSTLKL SSDVVALMDEVRRQWGMCYPFEDEEA >gi|312954455|gb|AENW01000053.1| GENE 41 41062 - 41730 825 222 aa, chain - ## HITS:1 COG:CAC1431 KEGG:ns NR:ns ## COG: CAC1431 COG0120 # Protein_GI_number: 15894710 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Clostridium acetobutylicum # 1 219 6 227 227 197 44.0 1e-50 MKKRCAQKALAYIQDGMVIGLGGGSTIAHLARFVKESGKQVQIVTPSLETETLCIKLGLP LLPLRQISHVDIAFDGCDEADRQFYALKSGGGIHAREKLIANMAEEYMLLIDESKLSDTL QFHVPVVMELLEDATAYVKRRVEELQGRFVCKHGEGKYGAVMSDHGNVLADVWFDKVGDP KKLNHALKSIAGVVDTSLLTREVTAILVVSDQGFELLKKGSV >gi|312954455|gb|AENW01000053.1| GENE 42 41781 - 42701 1207 306 aa, chain - ## HITS:1 COG:SPy0854 KEGG:ns NR:ns ## COG: SPy0854 COG1105 # Protein_GI_number: 15674887 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Streptococcus pyogenes M1 GAS # 1 295 1 293 303 256 44.0 3e-68 MIYTVTLNPSIDYVVEVNELTAGEIMRTKAEDLIFGGKGINVSSMLAQLGMKSCALGFIA GFTGDALEQGVAAMGIQPDFLKVEQGFTRINVKVHAQEESEINGQGPQIRYTHLEQLIKK LDRLKKDDILVLSGNVPGSIPQDIYADIMQHLQGSGIRVCVDARQESLMSTLVYHPFLIK PNHKELAEMFEVELSSREDLLVYAKELQAMGARNVLVSMAEQGALLLTETQEVYHAPACR GKVVNSVGAGDSMVAGFLYGYLREQSYAAALRYGTACGSASAFSKGIADRKTVEELLVQL KEREAC >gi|312954455|gb|AENW01000053.1| GENE 43 42698 - 43447 1167 249 aa, chain - ## HITS:1 COG:BH0826 KEGG:ns NR:ns ## COG: BH0826 COG1349 # Protein_GI_number: 15613389 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 240 1 238 251 170 40.0 2e-42 MLAEERFAAILSILQKQRTVTVLELTQALSISESTIRRDLVALHKMGKLKKVHGGATLLH KEYGLYETEVAARSEEHVEEKKRIARYAASLIQAHDFVYIDAGSTTLHMVEYLKEEEAIY VTNGLEHGRRLAAQGFRTFLLAGELKSKTEAVVGLGAVSSLQKYNFNKAFFGTNGITVDS GFTTPDTNEAYVKMEAMKHAQKCYVLADSGKFGTCTSITTADISDATIITGKGVEKEYLE EADIIEVEE >gi|312954455|gb|AENW01000053.1| GENE 44 43719 - 43925 64 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGNVGKADSLNRQALIAFSFSTHSQKGNMKKVPIERSDFGGQVEAIGTFFIDEYNVFCVI MGMEEAVL >gi|312954455|gb|AENW01000053.1| GENE 45 43958 - 44920 1250 320 aa, chain - ## HITS:1 COG:CAC2918 KEGG:ns NR:ns ## COG: CAC2918 COG1482 # Protein_GI_number: 15896171 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Clostridium acetobutylicum # 10 320 10 310 326 221 42.0 1e-57 MALVRLLPAFKDYLWGGTKLKENYNKKTDLDIVAESWELSTHKDGQSIVDSGEYKGLTLS EYVEKLGKDALGTKGNAFEFFPILIKFIDAKGNLSIQVHPDNEYALRVEKEYGKTEMWYI LDAEEGASLYYGTNKEITKDEFRARIEDNTILDVLKKVPVHKGDVFFIESGTIHAIGEGI VICEIQQNSNTTYRVYDFGRVGKDGKPRELHIEKAIDVSNLTPLESDFKPIGEEKDYGTY KCAMMATCEYFTTYVYDVKTECSVKVDEESFASFVIVDGEGSIESDDTMLSIRKGDSVFA SANTGKVTIKGSCRFILSKV >gi|312954455|gb|AENW01000053.1| GENE 46 44922 - 45722 782 266 aa, chain - ## HITS:1 COG:CAC2423 KEGG:ns NR:ns ## COG: CAC2423 COG0561 # Protein_GI_number: 15895689 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 1 266 1 263 263 94 28.0 2e-19 MVKGLVLYDYDGTLVDERDEIYVPTQLTKAAISRLQDLGYLCVLATGRALSYIPNGAKDL HLDGYVTSNGAHVTVHGKVIHNDVFSDEELLSLLQYMDSLSINYILEGTKFCYVKDLKES EYLHFMDNFKIPEDNFVKYRSFEDVRGRIGKITLTFPNRKQLETSGAELEKTYLCSYHRN CNTFDIAKKTIHKGVGARAIIDYFHIPMDATIAFGDGDNDVELLAGVVHGVAMRKHDPKL DAVASMVTGTVKEEGIYKALKKLEVI >gi|312954455|gb|AENW01000053.1| GENE 47 46019 - 46798 811 259 aa, chain + ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 4 258 3 256 256 110 31.0 2e-24 MNIKAVFFDIDGTFYDHTTNRVLPSTKEAVRKLKEQGIKVALCSGRPLQLAAELPVFDEF CWDGFIGGSGISVYDENRELIWENAFTEDQLKKLFAIAEKHELPLYVNGEKTFLTRPLPA KKEFVLDLFHLGVPEIRSWNHERVDVLSIFENRDYDFRMFQTVENIRMQPSCDYIMDILK KDTCKATGIKQLMAYWGLENEAYMAFGDSMNDCEMLQEAAVGVAMGNAMDAVKAYADHIC GSSDTPAIHDTLQAYGLIH >gi|312954455|gb|AENW01000053.1| GENE 48 46816 - 47595 955 259 aa, chain + ## HITS:1 COG:PM1555 KEGG:ns NR:ns ## COG: PM1555 COG0561 # Protein_GI_number: 15603420 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Pasteurella multocida # 2 259 9 270 270 86 28.0 6e-17 MKINAVFFDIDGTFFDHVSGMVLPETLTAVKKLRENGYKVCLCSGRAKEMAEQLGVLQMT AWDGYVGGAGVSVYNERMELISEHAFTREQTARIFELGRQYDICIQSHGTYEFMTKPLNP YARQTFAEFHCKVPEVRDWHDEPLVAISAYEKKSFDWSMFDEIEGIELQHPNDTCVDFMQ CGINKATGIRELMDFWGFPHDSYMAFGDSLNDMEMIQEAAYGIVMGNGKDALKPYADLVI GPSSEAVIYQILKELHMID >gi|312954455|gb|AENW01000053.1| GENE 49 47946 - 48869 929 307 aa, chain - ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 25 303 5 280 280 196 38.0 5e-50 MNKIYSGFHQLPHGNASTMVQEGCIVLEGGAFRGLYGEGVLDALMLENINLRCTIGVSAG AMNGLNYVSGQIGRSIRMNLKYRHDKRYVGRKALQNGEGLIGFAFAFHQADQEYPFDKKR FFQFDRRFIAVATNCETAEPAYFEKDHCRDIFQAVQASASMPFISKMVWMEGYPYLDGGC SDKIPFDWALREGYKKIIVVRTRPLSYRKKTDSITRKLPLGKTIYRPYPKFMKALEEMDA NYNRQCEALEILQEQKRVYVIAPSQPVTVGRLEPDLEKLGSLYWMGYYDTRRQIQDIRRY LQQDGSI >gi|312954455|gb|AENW01000053.1| GENE 50 49071 - 49373 335 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEEEIKIDDAWHMLMHYPNVWLGDYPEELYQAFLEIGREELVFHSKKQKTIEEITELMIR VKPGLRILRDEVVSAGRMGEHILLYDEMFVSVFRLNKAAL >gi|312954455|gb|AENW01000053.1| GENE 51 49992 - 50816 514 274 aa, chain - ## HITS:1 COG:FN0629 KEGG:ns NR:ns ## COG: FN0629 COG3716 # Protein_GI_number: 19703964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Fusobacterium nucleatum # 9 273 19 278 279 254 49.0 9e-68 MKTNSSDVKKLDRKDLMGVFWRSWRQDAVWNFERQQNLGSAYTMSRVVGKLYADDPEKRA RALQRHVEFMAITPHLSTLLYGILTAMEEENANNPDFDETSISAVRASLMGPIAGIGDSL IWGTLRIIAAGIAISFSANGSILGPLLFLLIVNIPTIPLRYICLFKGYELGTNFFKQFLN SGIMDNVTYIASAVGLMVIGCMTASLVSFQLPIMVGSGKFAQPLQTYLDQIMPGLLPLAM FGIMYFLLGKKIKTTTILLSVFALSIALAFFGIV >gi|312954455|gb|AENW01000053.1| GENE 52 50800 - 51582 434 260 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 4 243 1 239 259 187 46.0 2e-47 MDLLVQTLLITLVAAFGFAHDGVGSTMWNRPIVMAPLVGLVLGDIRTGIMTGATLELIWL GAFPVGASCPPEMVSGAIIGTSFVINSGGEPSAAVALAVPVATLVLMIKTGLRVLITSPV FCGHADKCAAAGDARGVERTETIGWIFEIVSLSAIIAVSYYLGAPLIKDIVAAIPPFINH GLEIATGIIPAIGFAMLVRMIISKDVAAFFFGGFLLSAYLEIPVFGVALMACVIVGVILT IKQTNNNKISEEVLSDENEF >gi|312954455|gb|AENW01000053.1| GENE 53 51605 - 52075 474 156 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 150 1 150 153 154 52.0 9e-38 MIVLVRVDHRLLHGQVVFTWTKSISTDCILIASDAVVKDELRMTALRLSKPNGVKLVMKS IDDSIKALNAGVTDKYNLMILCENIEDVSRLAFGYDKITSINLGGIKNEAGKRQISKALS VNDEEIELLKKLNDKGIELEVRMVPDDSKQDVMTLI >gi|312954455|gb|AENW01000053.1| GENE 54 52079 - 52819 648 246 aa, chain - ## HITS:1 COG:MJ1115 KEGG:ns NR:ns ## COG: MJ1115 COG0434 # Protein_GI_number: 15669302 # Func_class: R General function prediction only # Function: Predicted TIM-barrel enzyme # Organism: Methanococcus jannaschii # 12 242 7 258 261 75 25.0 9e-14 MNKNFLEAFNWKKPIIGMLHLKGNTDEEVFEIAKQEIDTYYNNGADAVLVENYFGTYHHM IPVLEYLQENYKDHIYGVNCLYQNTLTFELAIKYEAHFVQIDAIAGNLIEREDISFAEFI KLYRSRYPGYIIGGVRFKHTPYLSGKSLEEDLKTAMTRCDAIAVSQDETGQETSMKKIQE FRDIIGDFPLIVGAGLTAENCTKQFAVADGGIVGSWVKDTHIATGTVDEKNVQKLIAVRD ALVKGE >gi|312954455|gb|AENW01000053.1| GENE 55 52984 - 53394 522 136 aa, chain - ## HITS:1 COG:L1762179_1 KEGG:ns NR:ns ## COG: L1762179_1 COG2893 # Protein_GI_number: 15673688 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Lactococcus lactis # 4 122 5 130 168 57 32.0 6e-09 MANIILASHGELAKGMLHSASMIIGDLTKGVEVFCLYPGQNPQDYADQLRLKIENSRDAW IILADILGGSVHTALSQLTAFGDVTVLSGMNLNLVLSVLLGDHDDVSEKRMAHIMDEAKT GITCRKSIDKQEEEDF >gi|312954455|gb|AENW01000053.1| GENE 56 53912 - 56626 2757 904 aa, chain - ## HITS:1 COG:STM0571_1 KEGG:ns NR:ns ## COG: STM0571_1 COG1221 # Protein_GI_number: 16763948 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 22 358 28 360 460 302 44.0 2e-81 MLEKVYAYVVEATKLEMSDQGNSLYISEQLQLSRNMVSQYLNQLFAEGRLLKINTRPVVF YDGDTIEDMYGVSLHQREFISLEEFQKALQPHQPQDFEKLIGYDESLASLVNQCKATISY PPSGLPLLLYGPTGTGKSFLAQLMYEYAINQGLIAEDRNFLIVNCSEYANNPELLTANLF GHKKGAFTGADRDNPGLIKLAEGGVLFLDEVHCLKAECQEKLFLFMDKGIYHMVGDNEKW YTSSVRLIFATTEKPQEVLLKTLLRRIPMIVTVPSLAERGSHERLQLIHSIFQDEEKRIH KSIHISSLVYRLLLSCECEGNIGELKNAIQASCVNALFASDQKSSILEIRAFNLPEKLRE RKDSGKSVSRESQRMIPVHELKSFVLKERPIIQLLEHILAAFQAPHEFPVCLDEAGKAMH SYQEATMLRSSAALSGNEYVQGIVSNIFDMLSLRYGFKYVNNDLIAITACIADCMQNTLE LGNWQEANRKQMAALQKFLKQKLAREYAIAGEIREHLENNLDLKFEDMISVILCLHLKLL NRMQDLNKRIGIIIAHGFSTASSLADAVNKFLGRYVFDSIDMPLHVTTQEIIERLNRYLS KIGRFEELFLLVDMGSLEDLYKGIENQNANIGIMNNVTTKLALEVGNGMIQGTGMQEIFD AVQTYSAYHYHIVEHRRKEQVILCSCASGIGTAEKLKTILTDSLPHNFPIQVLTYDYNTL LEKQMHDAFFDTYEVICIVGTLNPNIEGIRFIPIEDLIINDTMDALNIYFRDYMREEEMK TFQQNILKNFSLSNIMNNLTILNPNKLLEHVADAIDKLQLELGLRFTNNTCFGLYVHICC LIERLVTRREIEIFTDIEDFAQQEAAFIQCVKHAFSVVEEYYGVEIPVEEIGYIFNYVEH NDGY >gi|312954455|gb|AENW01000053.1| GENE 57 56763 - 57980 1263 405 aa, chain + ## HITS:1 COG:lin2555 KEGG:ns NR:ns ## COG: lin2555 COG1508 # Protein_GI_number: 16801617 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Listeria innocua # 17 403 21 445 447 153 28.0 7e-37 MTQFLQQNQTMKQTHILTHKNQQALKILKMDSRELLELISECVQRNPFLDFHHSAQGDDY LLQNAIQRPSLQEDLYMQLHTLREPYDEAICAYLIESLDEHGFLSGSVSAYCEDLQIDEE TLLNQLRILQGFEPCGVAARSIREALILQCRKTRNTMGEQILSEYAQELVEGDLAAIAGG MQLSVREVKEVIASLRTCNPDPCAAYAKEHVETILPEVEICVQDQQLQIVPMRYGATLVQ EQYVQAIEQNEQLKAYFREANLLFETLNRRNATLLLIMNELVSIQKHHFLFGDELQSCTL QQLADQLGLHVSTVSRALQHKYYLFHGECYPIRSLLRTATAQGDSSDAVQRAITEILRHE DPSHPFSDQQLVIKLRTMDISVSRRTVTKYRKLLHIPSSTHRKHT >gi|312954455|gb|AENW01000053.1| GENE 58 58022 - 59248 985 408 aa, chain + ## HITS:1 COG:sll0267_6 KEGG:ns NR:ns ## COG: sll0267_6 COG2200 # Protein_GI_number: 16331091 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 155 403 2 249 253 148 35.0 2e-35 MKKTNTGHAQEQPLNCCVMTMGIKHAEQLVLLFGKTRVMQLMNQLSEQAQHLLPKRAQIA QLLDYRLLFLLPSYTRLDALRLVYDLDDCCDAIAQQLYAARLALSFGICLPYTSDTLEDA IQCAEYCRLHDRDCERFSTSYAFYSRQAKEQLHHRYQLEQKILNALHRQEFELFLQPKVN TKTRQVVGAEALLRWIHNGVCIPLQEFLPVADQNTCIRLLDTYMFERVCQLLAQRHAQGE PLLPISINVSKASFEDGHYYLGEILDICKRYGVDPSLLELELHEDIPFEHKEQVQMFVLR LKGAGLRCSLDDFGSSRCNLHVLSWIDVDMVKLDHSFFAGPWNSRQQILLQHIIPMLHRL HIPILAEGVETQEQVQFLTDLHCTLIQGFYYSPPIPVHQFFQENEIIE >gi|312954455|gb|AENW01000053.1| GENE 59 59502 - 60131 673 209 aa, chain - ## HITS:1 COG:lin0244 KEGG:ns NR:ns ## COG: lin0244 COG0454 # Protein_GI_number: 16799321 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 13 206 2 189 194 130 37.0 2e-30 MQRMRMEEPMTTLDKRIPYYPVLMVLTQPPVITDIPLAQGYSFHPYEPSYKEAWIALHVS LGQLDSMEAGRRYFEETFEAQPKELQQNMILVVDENGQLAGTSSVWEGYHFGERRMRVHW VGVDERHQRKGLAKSLMLKTIQLYSSLHCEHPLYLTTQTNSYVAISMYQRLGFTAYMGSM PVNFHANAETFAKDNETAWRIIGEQLHKL >gi|312954455|gb|AENW01000053.1| GENE 60 60226 - 60957 916 243 aa, chain - ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 8 238 6 235 243 139 32.0 4e-33 MEKLDFGKGAVPLYIQIKKIIKDKILSKEYAPGDSLPSEAQLQEIFHVSRITARQAIAQL ESEGLVERARGKGTRVLFQNKIEEQLAGIKSFTNEMLERGIQPGTRWAHIELVKADRHVA DIFGCKKGDLVYRLDRVRTGDDVPIVYFVSYFSRDRNLPLEDENYTGSMYALLDELNIRK PVKTRENFKAITARKEEAEKLDIKKGDPLLIRERVSYDHEGNVLEYTISYYPGERYSYSI ELG >gi|312954455|gb|AENW01000053.1| GENE 61 61001 - 62740 1957 579 aa, chain - ## HITS:1 COG:SA2435 KEGG:ns NR:ns ## COG: SA2435 COG1482 # Protein_GI_number: 15928228 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Staphylococcus aureus N315 # 233 458 7 214 312 78 28.0 4e-14 MKSNYNKFPSTKIKGHEHAAVVGYNNILDTLKKEIPSGKYVITCDVYPGVRDEEILTELK KLEPSVLINMIDVFKEEKTITEQLKYILTDDRVFGKMYYGEVSDFIDMEKLEAAKQQVEK ADGLVIVYGFGASLVHPGDKLVYFDMARWEIQMRYRAGMGNYKCSNYDEDPLRKNKRGFF IEWRIADKHKMSVFEDIDWLIDTNKANDPKMIPGTALRDALKQIAQQPFRTVPYFDPGVW GGQWMKEVCDLDREKSNFAWSFDGVPEENSLYLEFADAVVEIPAMDLVLYQPKPLLGDQV YARFGAEFPIRFDFLDTMGGQNLSLQVHPLTEYIKKQFGMQYTQDESYYMLDAGEGACVY LGLKDGVDQKQMIEDLRRANKGEIEFDAEKYINKFPAKKHDHFLIPAGTCHCSGSEAMVL EISATPYIFTFKLWDWGRVGLDGRPRPVHVEHGKEVIQWDRTTKWCEENLVNAIHEVKRT EDYVEEHTGLHELEFIETRRYWTETITHHDTAGTVNMLNLVEGREAVVESEEGKFEPFVV HYAETFIVPASTGKYTIRPYGESVGSKIGIMKAYVRNNS >gi|312954455|gb|AENW01000053.1| GENE 62 62743 - 63297 687 184 aa, chain - ## HITS:1 COG:PH1956 KEGG:ns NR:ns ## COG: PH1956 COG2140 # Protein_GI_number: 14591696 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Pyrococcus horikoshii # 11 178 14 183 192 101 35.0 7e-22 MNVIEPKVIHDFQDVIRGSEVNTSVKLYQDAKGFYRTESALADDTLMYEVYHYTQGDDKR AGNLNWGLTVLYPVLVNGECNMTRGHWHENRECVEFYFCIAGEGLLMLMDEDGTTWAEKT YPGTLHHIDGHLAHRLINTGDEPMKIGACWPCDAGHDYAAVERQPFGYRVYKEEGTLRFE KVED >gi|312954455|gb|AENW01000053.1| GENE 63 63294 - 64070 870 258 aa, chain - ## HITS:1 COG:MA0821 KEGG:ns NR:ns ## COG: MA0821 COG2140 # Protein_GI_number: 20089705 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Methanosarcina acetivorans str.C2A # 52 247 42 236 246 85 29.0 1e-16 MEFYPGFDIESREKDMEFVYGPDVFGPKPEKRTLEAIRSSLQDPSCTGPEILYSIVMDVG RKQDHTAITERNLLYGAVTYAKGTLGKEPVRSQGHIHAISPSCQSSTCEVYEIWDGEAFI YMQEYGKDDAGNCYAVHAKAGEVVIVPPGWVHATINANVEKPLTFGAWCVRDFGFDYEEV RAHHGIAYFPVVEAGNITWEINPAYKNAKLHVIAAHDYPQFDLEPGKPIYTQFIEDPDRF LFVSRPQLKEKEWEEFHK >gi|312954455|gb|AENW01000053.1| GENE 64 64238 - 64996 876 252 aa, chain - ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 11 243 3 235 243 132 35.0 6e-31 MDERIAKQFTISKASPVPLYFQLKTQLVELLKQGIFQAGDKLPTEAEFCELLDISRPTVR QAFSELINEGYITRHKAKGTFVSRPKIEGYFFQKLGSFDEEMRSLHLTPSTRVIVSEVIE LPEECVEIYPKSKRVFHLQRLRYADHEEMVLVNTFVPYEHFLDIELEDFEQSSLYDIFSQ KYQTEVAYVDRTVEARKAGQRERTILNMEEDGVLMHVETVAYTQQDEPVEYSIAEYRGDR NKFKMRLIRREN >gi|312954455|gb|AENW01000053.1| GENE 65 65104 - 65805 936 233 aa, chain + ## HITS:1 COG:HI1116 KEGG:ns NR:ns ## COG: HI1116 COG0274 # Protein_GI_number: 16273041 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Haemophilus influenzae # 7 229 1 220 223 179 45.0 4e-45 MDIINTLTEKSLAKYFDHTFLKAYATRADFEKLCKEARELGTAMVAINSAQVRVCKELLK GCDVHVGAAISFPLGQTVLEIKVEETKKAIQDGSDEIDYVINIGEAKMGHWDYIEEEMRQ ITEICRAHKVISKVIFENCYLEKEEIKKLAEIAKKVKPDYIKTSTGFGTGGATLEDVRLM KETVGDDVKVKAAGGVRDWETCKAMIEAGAERIGTSSSIAILEGFRNERGQQK >gi|312954455|gb|AENW01000053.1| GENE 66 65802 - 66671 950 289 aa, chain + ## HITS:1 COG:BH3365 KEGG:ns NR:ns ## COG: BH3365 COG1091 # Protein_GI_number: 15615927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Bacillus halodurans # 1 269 1 262 283 103 24.0 3e-22 MKTMVITGGNGFIASLVKEAMQSTMEIIPLTRKELDLGETAAVRSWFNTHDYDYVFHTGA MAQTADCENHPELTHRINVDGTKEIAKACKEKNARLIFISTEQCFNGKTEEGPFTEDTPL CSVTAYGNHKAECEAFITSVLEDYIILRFSWMLGMSRPGIKASPNIIRNVMNAMFYQTPA KFTVNEIRGMTYAQKLADVFDKIIELPSGIYHVSDTNTHNTYESAKIVAQKLGFTQEQID ACILPNHERYADRFRDYRLDTQKLKAHGIDFGTFEENVDACLKDFGWLK >gi|312954455|gb|AENW01000053.1| GENE 67 67127 - 68002 779 291 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401868|ref|ZP_06646009.1| ## NR: gi|293401868|ref|ZP_06646009.1| hypothetical protein HMPREF0863_02149 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 288 5 297 322 330 56.0 8e-89 MKIAYLMHSDRKYDEVVETINQLTKQGDHVFIMINDDDLREQVQFVYMDYSRVHISHTQE FAQEGDMSMARGTLIQMKEAVQIGFDYYINLNDGMMPIKTREEITAFLEEQNGKDFYYVE TSEKEEPALRKKTLKYYPFTNLLAFPRGKATRAITRGFGSLLYALHIRRTLDDVIQIGSP WFMLTHTSAQILADNFDYCSTTFKLSWYAEEMYIPMMLDKFGNKCVEHVNNDYRVVGNGK WERSQNTRTTTQEAIDRYPEALFAGAILVDEDFTLYEKYFDIYNANLETEE >gi|312954455|gb|AENW01000053.1| GENE 68 68219 - 68740 144 173 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKIFRIFTLACFLVLLNLAFVPATHAFTDDVRDNEKIITVFANLDNQIEVNSVVQNAFD SYNADIVRVLDIRNQYNLLAADEGWVTNSAQYYYGDMIHGSKGTIKCYVVQTSKPSVSSC SGSVYVAGNGVKFVSKSISNNNSLSARLNWTIRLEASSGSIPTTKSHSVGLYS >gi|312954455|gb|AENW01000053.1| GENE 69 68909 - 69220 319 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295099961|emb|CBK89050.1| ## NR: gi|295099961|emb|CBK89050.1| hypothetical protein [Eubacterium cylindroides T2-87] # 1 102 8 109 111 110 52.0 2e-23 MKKSEKDALKQKIQSENILVRRLGSWVKVGGIIFLVTAGLCVWGFTGMKDPILPDISDTV RNVVKWIALVGAILSGGFTIMSFMSFRNGKKHVLAMIDELKGF >gi|312954455|gb|AENW01000053.1| GENE 70 69294 - 70184 871 296 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 2 296 4 277 277 337 60.0 1e-92 MKKVSKKSLNSSFWRWFYGNLTCFSHEHMQTFGYMWSMLPIIQELYETKDEQAEKLQTYY PFFNTEPQIGSIVVGITAGLEEARANGAEEIDDEMINGIRAGLMGPLAGIGDSLIVGTYI PVLLGIALGLAEGGSIIGPLFYIVVWNVTSIFFQKWIYNKGYELGGSAVEVIVGEQATAL RESVIVMGQVIVGAMAGTWVSITTSVQLTTSIQNKTEMVIEGSKVIEKVTGTQEVPVLLQ EKLDGAFPGVLTLLFVLGCWWLMAKKAISPIKIMLLMVVVAIVGVLVGFFDPNLSY >gi|312954455|gb|AENW01000053.1| GENE 71 70187 - 71026 697 279 aa, chain - ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 2 279 3 281 281 241 53.0 8e-64 MISWVQAALLGLMSCCAASTIACLGTTVGNYTLNRPLIASVFVGLILGDVKGCIQIAVPM QIIYIALVTPGGTVAADLRAVSYIGIPLAWALAKSQGLDLGGSEASGLAGALGAMVGTVG TVQFYGTAMMNLVWQHIGWARLDKKDFSIVGKVEVIFPLISHLLISFIPVMLIVYYGADA VDQFKEALPMGSWYMKSLFTLGSLLPAVGIAILLKSVVNKATDLIFFLFGFTLAGSMHLT LIAATAVGAVFALINYQMTMIRNRAAAGPAGIDDDEEDI >gi|312954455|gb|AENW01000053.1| GENE 72 71091 - 71582 525 163 aa, chain - ## HITS:1 COG:CAC1458 KEGG:ns NR:ns ## COG: CAC1458 COG3444 # Protein_GI_number: 15894737 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Clostridium acetobutylicum # 2 163 3 163 164 214 61.0 5e-56 MISFVRVDDRIIHGQIITRWSKEYPCDGIIAVNDKAATTPVLKQSFVASTDKKVFVWTKE HFLEKAQTVLDSNKRYFLITKNPVDMKELLVDNKFVPSDVKRVVIGPCNDRPGATKLGQN QSITQEEAEACEAMTNAGYDVFFALLEETAIGSWPKFRSKFGY >gi|312954455|gb|AENW01000053.1| GENE 73 71616 - 72044 553 142 aa, chain - ## HITS:1 COG:CAC1457 KEGG:ns NR:ns ## COG: CAC1457 COG2893 # Protein_GI_number: 15894736 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 142 1 142 142 112 43.0 3e-25 MKYVIMVSHGEFAPGLHSAVKMMTGERDDVLSTSLKADMSADEFAANFRTLVEPLNADDS VILLADILSGSPFTNALAVLDEKGLMPNTLVIAGMNMPLAITAVLMKDNFDDAELLKETL LSEGHAGLTEFKVESDDAEDDI >gi|312954455|gb|AENW01000053.1| GENE 74 72541 - 73482 1219 313 aa, chain - ## HITS:1 COG:CAC2918 KEGG:ns NR:ns ## COG: CAC2918 COG1482 # Protein_GI_number: 15896171 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Clostridium acetobutylicum # 1 312 1 310 326 205 34.0 8e-53 MYPMKLKPVYDKTIWANDRLTTMRGMEEKGLGTCWEISAHPHAKNVILNGEYAGKTLDEL IQADPQSILGEKQLHQMLRLAYLDAREDLSIQVHPYDEYARAHENDEGKTESWYILEADK GATLVAGTTASDAAVIKAAVENDQVEDYVRKVEVEAGDFVCIDAGMLHALGKGILALEIG QNSNTTYRFYDYHRQDANGRERELHIDKSFDVADFGLHCNKVASPFTDADTTQEKLLVDR REFSVRLVDVAGSYVLPQDEKRFYCLSNVSADCVLRYQGEELPFAFTENIFVPAGCADIE ICGKARILVSFVR >gi|312954455|gb|AENW01000053.1| GENE 75 73647 - 74540 887 297 aa, chain + ## HITS:1 COG:SSO3029 KEGG:ns NR:ns ## COG: SSO3029 COG1082 # Protein_GI_number: 15899735 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Sulfolobus solfataricus # 5 272 7 239 268 75 25.0 9e-14 MYASVITDQIDEDLETALRIARLYGYTHVELHNVFGKSIEECSLKEINTIRTLLNTYELK VSCIASTVFFLCPLMENDKVSLFNPAFHAIEGDVPTHLRYLKNACRIAKKLNCPRVRIFP FRFPDNRPPAYGTQEHIALIMKNVRQAVQIAEEEHVTLVLENCPYSHLPKGHMSIQIVKA IKSDYLKLLWDPANSYRAYKENVPAEYLTFSLEEELHYIYPWIDHIHIKDYAYNAALEKP FQHVAFDMGDIDFMMIFSNLRKYGYENAVSLEAETDYNETLESMKRMQDWVTLSDNT >gi|312954455|gb|AENW01000053.1| GENE 76 74671 - 74997 382 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401877|ref|ZP_06646018.1| ## NR: gi|293401877|ref|ZP_06646018.1| hypothetical protein HMPREF0863_02158 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 91 1 91 107 105 56.0 1e-21 MAKKKTTTGQTSARMVMDVLKKHYAFTPDTAVGYDAFKNLRLSTSVIAYTIANLMETDVI MKTDDDRYYFVEKNWNKVVHKVNFAYVILLGLPIIILLIFLGIQMLMS >gi|312954455|gb|AENW01000053.1| GENE 77 75038 - 75841 916 267 aa, chain - ## HITS:1 COG:TP0290 KEGG:ns NR:ns ## COG: TP0290 COG0561 # Protein_GI_number: 15639282 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Treponema pallidum # 1 261 6 264 277 82 26.0 9e-16 MKLFLSDLDGTLIDVHGNIQEQDVQAIHTLAERGIAFGIVTGRDYGFCQKLISRYRLAAD MIIGNNGGSIWIHDEKVMEEHIEAGDAVRIMEFLKDHVNEINPFVCNEQSTFFFMREQYA PEHWNEVREQLAYLGDIADRDLLRYLKEKQEPVVKISIHTYTQERRDIWLPILRGQFQDA YEILPTSFDYIEITRKGIDKGKSFLQALEYWKLSQEEVAFIGDGANDIPLFHEVEASFCM ASAAQEVRREAAHVVKSVAEAVTFVIE >gi|312954455|gb|AENW01000053.1| GENE 78 75822 - 76643 832 273 aa, chain - ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 262 1 256 256 112 29.0 8e-25 MIKLAVFDVDGTLVTKGNRRVPASCVHALNELSRKGVKLAIASGRPPFAMEQSLLEQVSF DYFVCSNGAFVRNAQHEVLYHYSFTMEETRSLIHAFKKTDNALMFQCQDAAHCYHGYKRI ANMLQNFLGRLDILVDERESEGYLQDTMPLAAVAKIEDADLEMMKQRFPQFLFTPFDTCF YDINGAHDKATGVSHICEAMGWSMQDVISFGDDYNDLEMIKACGIGVAMGDAREAVKEAA DYVSGLCSRNGIAQALLHYGLIDRVYDDEAVSE >gi|312954455|gb|AENW01000053.1| GENE 79 76665 - 77198 701 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401880|ref|ZP_06646021.1| ## NR: gi|293401880|ref|ZP_06646021.1| hypothetical protein HMPREF0863_02161 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 175 1 173 174 114 38.0 3e-24 MSKFDTMDYIICAAVLCYGIYLTVQNVRLFLANEKVRKEYLNKHKDGYTMVNQYLPYMIF FLGFSVIGIIGIFVMEKNTKDELYVCFALALMAIISAGMALDSIVKRRAIVDDDGFVYEK AHYRFRSILSMDPMKSIIKNIDILTTERQHVVVSKKMGVYLHECFLAWKKRKKNKNK >gi|312954455|gb|AENW01000053.1| GENE 80 77283 - 78437 1597 384 aa, chain - ## HITS:1 COG:BH2276 KEGG:ns NR:ns ## COG: BH2276 COG0477 # Protein_GI_number: 15614839 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 6 372 5 367 392 86 20.0 8e-17 MRSQKKNVAMLCLFYFLSYVAFVLPYGYMQTFLEYVGYDVVERGIILSGTAVVAIITQFF IGYLCDKYKTDKKFFNLCLIVFVLSTLVMYQVTQRNFFLHLIFISLVGGMFRTTLAVQDT WTLETSETCRNNFGPIRAFGAIGWMIGSPIGALVVEHYGYPALGYVFAGLAVLNILLTMF MQDAVKVEKSGGIHASDLKELLLDKKYVVVVLIFLFINVIATADIYTTVDKMMALGAKEG MVGARWSIQAFTELPLFFAGTWLLKKFGDYKLMMFGTFMYIIRFLGYAVVQSPEMMIVVT LMQCITYPLIMITSKTLVDDTTPIHLRSSGQTIASAFYVGLSLLITPVIAGAMVSSLGAD LTLALIGLSGFVPLGLGILYKRLD >gi|312954455|gb|AENW01000053.1| GENE 81 78614 - 79174 810 186 aa, chain - ## HITS:1 COG:BS_yckF KEGG:ns NR:ns ## COG: BS_yckF COG0794 # Protein_GI_number: 16077414 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Bacillus subtilis # 1 186 1 185 185 172 48.0 4e-43 MNNKEYAGIVLQELTHTLSSIDEVQAEKFVQLIDEADEVFCAGAGRSGFQVKGFAMRLMH MGVASYVVGETCTPNIKEGGVLVVCSGSGETKSLVNHAAKAKEMGARVALITINPNSSIA NMADVVIEISAPSPKSAKQGDIKSIQPMGSLFEQSEGIFMDIAVMMLMERRGKDSDTMFG RHANME >gi|312954455|gb|AENW01000053.1| GENE 82 79188 - 79814 962 208 aa, chain - ## HITS:1 COG:BS_hxlA KEGG:ns NR:ns ## COG: BS_hxlA COG0269 # Protein_GI_number: 16077415 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Bacillus subtilis # 1 205 1 205 210 196 52.0 2e-50 MKLQLALDTLTLEECMTLLQETRGSVDIAEVGTPFIIEEGMRPVREFKQHFPEIEILADA KIMDAGELEAETAFKAGADIVTVLGASNDETILGAVKAAKKYNGKIMIDMIAVKDLEARA KEIDAMGVDYICVHTAFDVQQTGKNPLDELMIVNRAITHAKSAVAGGVKLATIDAIASEG AAVVVVGGAICNAKDRAAAAKEMKQHLK >gi|312954455|gb|AENW01000053.1| GENE 83 79819 - 80583 1052 254 aa, chain - ## HITS:1 COG:BH0801 KEGG:ns NR:ns ## COG: BH0801 COG1349 # Protein_GI_number: 15613364 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 3 232 8 238 259 128 32.0 9e-30 MSKASEARRNALYQRVLGEGRVRVGELARQLDVTTETIRKDLKVLEERGVLTKKHGSAVV RNAYYQLPFDVKLQEHTLEKQLIARKALEFIEDDAIVYMDPGSTCLQLAKLLRLKKNITV LTNSLPIADIICDSGLDLIMTGGKLQKKGRALVGYYATNVIDTVRIDIAFMGCDGFMDMD GPMTFSMEHAEVNRHILAHSRKNILLCDSSKFTKTATYQFAKFSDYDVMITNELQEGQQD CVSEVKQLIMVKEN >gi|312954455|gb|AENW01000053.1| GENE 84 80794 - 81678 957 294 aa, chain + ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 3 280 11 265 266 112 27.0 1e-24 MNSFDLHMHSCYSNDGEFTPQELIHMADEAHLTTIALSDHNTPKGIADMVRLGEAKGIRV IPAMEFDTLFEELEVHVLGYGIDYEQPYFQSLFDSLSERKKAVQIKRVEKIREVFDLDID PAALLKRYAGKNPFPAIVHHIMEQYKDKEEFADYQPGGRRCEPQPVNFYWDMCSAGKPCY VRVEYPSLKDTVQRIHDAGGIAVLAHPWLNFYQKEERLQRALDEGIDGIEAYSNYHEAKH NRYYDAYCRRHGVLMSCGSDFHGKMKPKIRMGEYGYEKDDGEEILQAFLKRLAK >gi|312954455|gb|AENW01000053.1| GENE 85 81896 - 83254 1469 452 aa, chain - ## HITS:1 COG:no KEGG:BL05185 NR:ns ## KEGG: BL05185 # Name: not_defined # Def: hypothetical protein # Organism: B.licheniformis # Pathway: not_defined # 3 448 16 470 478 75 20.0 3e-12 MGYIVGKQRVRDSLYVLLQHAQEAGEITKKRREYLLKQCEQLAQELVLLLNHKQSTSLSM ADHKRILNTISYVVLQGLEEMEERSLQELEIDACFERGLLVLQDKEQQTRNLLNQLRRNR LPFCNERYNSVMDEQIPHYLEQLSTYEGILYYSHTTEDLDYPLVDGIPLFHDMYHLDGMD LVLYYMERFALEHTFCEYFREELPEFLRRYEQQKGVTVEYLGLNLCELLWYQCFASLMLF QQPSLLLAEQDVKRLRALLRHCSLQEAVGQVHHAIAVRMGKSVADYLTLFEEQLQAQLQV FVRDAYALLVYEEAVDDCFVIDLTQGKDEETFLALLEEVEKYACLQDKIQYLRSQKISAY DLIDLLENAVFMNAEYDAYYEQLSLEEIAVLLKLLHPAGGNFHEAWKLDDADLKEIEQEQ EWQSRFIHHIRQRSQKEREMLCELLNKLRIRS >gi|312954455|gb|AENW01000053.1| GENE 86 83258 - 83665 344 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRQNILEVLQEGESGLRRELACIGLELRKEQMQELYQSQQLALRRYRWVETKEDRLFDI LGPFLKSPYMALPTYMLHLKQSIWLYYHVRSHISWQVSDEELCEILYEEYLLYHGEISRQ LALRILQRVKRSQEE >gi|312954455|gb|AENW01000053.1| GENE 87 83986 - 84528 582 180 aa, chain + ## HITS:1 COG:no KEGG:CKR_2027 NR:ns ## KEGG: CKR_2027 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 1 129 1 127 177 76 41.0 5e-13 MKQIPNILSAVRILLSFLLLALTKDTTLFLIVYFIIGISDVLDGWLARSLHVQSELGARL DSIGDLAFYCISLYIVFFQMNLKIMNLISMLVLCVFVLKLAALLLTRWKHHIWASMHTIG NKLTGLLLFLLVPLCVVTKSLPLIPVALVIACSYLATFEEMLLILSRNTYDINTKSLLKK >gi|312954455|gb|AENW01000053.1| GENE 88 84729 - 86069 1639 446 aa, chain - ## HITS:1 COG:CAC0460 KEGG:ns NR:ns ## COG: CAC0460 COG1253 # Protein_GI_number: 15893751 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Clostridium acetobutylicum # 1 439 1 440 443 442 55.0 1e-124 MDADPAQSSITLQLLLIVILTLINAYFAASEMAIVSVNKNRIHRKVEEGNRKAMLVEKLL QEPTSFLSTIQVAITLAGFFNSASAATGISVRLGAVLEAWAIPYGETISMVVVTILLSFV TLIFGELVPKRIALQNAEAYSMFCAKPILIISKIVSPFIKILSWSTRFVLRLFGMKDENV EESLSREEIRSMVESGQESGVFDEDEADMIDSVFAFDDILAEEVMTPRPDVFCIDIDDPQ SEYLDELMEMRYSRIPVYRDSIDNIIGILNIKDFVVEARKNGFEHVDISRILRKPFFVLE SKNIDDLFREMQSKHQHIAILIDEYGGFSGIVTMEDLVEEIMGDIEDEYDEDDEAQIEKL DEHTYVLDGGMPIDDINEELGLQLENDNHETISGFLLDLIGQIPEDGEEREVIWNHIKFQ VKEVKYKRIHKVQLVLMQEEGNSEEV >gi|312954455|gb|AENW01000053.1| GENE 89 86229 - 87296 1129 355 aa, chain - ## HITS:1 COG:BS_ytoP KEGG:ns NR:ns ## COG: BS_ytoP COG1363 # Protein_GI_number: 16080038 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Bacillus subtilis # 15 354 17 352 357 196 33.0 6e-50 MKQIDRIRKFSDAFGPSGFEDAVVAYAQEEVREICTCKEDHMRNLYMNLKGNSQGGVNIM LDAHSDEVGFIVQAVKSNGLLRFLPLGGWDVKNIIANKVLIKNRDGKLIPGIVCSKPVHF MNASEQGKALDFADVLIDVGATSAQEVQESFRIGIGAPIVPDVTCTYDEEHQTFMGKAFD NRIGCAAVVETLCRLHGRTLTNTVSATLSSQEEVGERGMTCVMNNVKPDVVICFEGCPAD DSFEEEYMIQSALKKGPMLRHFDRSMITSPRFQRFALELAHANDIPVQESVRKGGGTNGG ITHTAQFGIPTIVIGVPVRYAHSSYGILAYQDYEHAVELAVQIVEGLSKDIAESF >gi|312954455|gb|AENW01000053.1| GENE 90 87365 - 87991 675 208 aa, chain - ## HITS:1 COG:no KEGG:SGO_0403 NR:ns ## KEGG: SGO_0403 # Name: thiJ-2 # Def: 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein # Organism: S.gordonii # Pathway: not_defined # 1 208 1 188 210 68 26.0 1e-10 MKAAVCLYDGFCNFEFSVLLESLALADCQIDYIAKTLKPVRAEEGFLALGEYTWGTICAD DYDVLVLTGIGAEDDSSDWILADEELLSLIRSFDKAGKLIAAISCAPIILVNAGIMNERR YVASVDRECFMAGGACTSVELSAGQMKGLLDMKEQKKHPELHGYVQDGNVITANGWWFRE WAMAVCKALQLPFYPKSFGLETEEAEEE >gi|312954455|gb|AENW01000053.1| GENE 91 88841 - 89503 804 220 aa, chain - ## HITS:1 COG:SP0843 KEGG:ns NR:ns ## COG: SP0843 COG0274 # Protein_GI_number: 15900730 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 220 220 230 60.0 1e-60 MEMNKYIDHTLLKADATYDKIETLCAEAKEYDFASVCVNSYWVSACAELLKGTDVKVCTV VGFPLGAMSTKAKAFETAAAIADGAKEIDMVLNIGEMKAGHYDAVRADVKAVVEAAEGNC VKVILENCLLTKEEIVKACELCVEAGAAFVKTSTGFSTSGATPEDVKLMKDTVKGRCLVK AAGGVRCYEDMEKMVEAGADRIGTSAGVKLMQKETSDGGY >gi|312954455|gb|AENW01000053.1| GENE 92 89592 - 90599 826 335 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402344|ref|ZP_06646481.1| ## NR: gi|293402344|ref|ZP_06646481.1| hypothetical protein HMPREF0863_02622 [Erysipelotrichaceae bacterium 5_2_54FAA] # 7 324 5 334 349 119 30.0 3e-25 MREENLRERKKQRRACVRRLRMLLVLFSIFLIAYMVFSYFLLKLMLEDVHIAFLRNFLFH SVALLVWLAVIRMLWSCRRLGRLLFQVLSLVNLYTLYELPALFRIDIAKENSFLRIVFTL MVAGKAALALYMSWSLQRNPQIIYIWKPHSTEADNELQGKAMSPVNFSQKEHIQHDHRLD IRARNRIRACSVALLLYQYGMLVLLYLLMFVFRYYSSDHEGMQFMQRTLLLASLFSALIW SLPAVSLFLYKPWSRWIIPVMWGMELLRLLFTLPQLADVFQTQNYQLLSWGILIVTELLR YLLLYRMLQYFLKDPFVRVYWMRRYHEGIQEDQEL >gi|312954455|gb|AENW01000053.1| GENE 93 90833 - 91519 752 228 aa, chain - ## HITS:1 COG:CAC2800 KEGG:ns NR:ns ## COG: CAC2800 COG3546 # Protein_GI_number: 15896055 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Clostridium acetobutylicum # 1 218 1 223 225 73 26.0 2e-13 MFIYDTKLPFEVRITRPDMKYYLLLDRQLKGCSSGLKQAAVYIRQSFMINNPTFHDIFMR LGARQISDMEVLSCIIHQMHGEDDRYYDESNDDTPVFEFIKPCHTQEEHCSCQPESEEEQ HHVNNDLTAAVMRDMQYEEEQIHIYEELIRYIQDDGADEAFSYLLNSAKKAMDTLRNLLH ILTTHTEMKDFGEGDTHNAWDLDTSNYFDKPNPTFVNPSDIEDFPFKK >gi|312954455|gb|AENW01000053.1| GENE 94 91606 - 92004 436 132 aa, chain + ## HITS:1 COG:MA0038 KEGG:ns NR:ns ## COG: MA0038 COG5496 # Protein_GI_number: 20088937 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Methanosarcina acetivorans str.C2A # 32 132 40 141 143 74 37.0 4e-14 MKEIKLHTKLTKKITVEESMLASHVGSGIVDVYATPMMIALMENTAAACLNQFLEEGETS VGVMMRTTHDAATPAGMTVTAEVEITAVDRKKVSFHIIARDERDLIGTADHDRFIVKKEA FEAKALSKLENS >gi|312954455|gb|AENW01000053.1| GENE 95 92376 - 94514 1716 712 aa, chain - ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 373 598 359 581 721 89 28.0 2e-17 MKKQVIPALLLLMGMLSSLGVFLFAFPFWDAVLWMLYIPVLIFAVVVYNRLLLRRRKKVI LILAGGMLLLGVLSFSLLQEGAHIAYNIITEVYHDASGYVFYPYDVTDTAMLYRFSLTWL LLYVSIWLFCGMLTFWNTHRYFALFMLSFLPVFFTLLYQTPIPWLFAVSLIIFWFMLLLS RNGVTNGHGGYVRLSAFGLSVICVLLTFFTSLPDTYEMRSTSGSLRERLLQRVDELAYFL THAGEDEGEVDLGKAANRYYTGATQLVVRSEDARGTIYLKSYSGALYEDNRWQSLPESSY AALKSYDWKDVDTWLDKKNPAFTQILQKTGALMHLEIEDHRASKRYALTPYLMKEALPET KPWYDAYRLEHDDTMRYTAYALSSTTINGDSTVKADAYPAFVKEHYLQIPANLKRLFDER KPFKKLTSLTGEHLTYDIQTTIQEYLRETTSYTLKPGRTPDDRDFVEFFLTENKKGYCVH YATTAVMLFRYMGIPARYAEGFSFQAGAMSGGSMEVPDESAHAWVEIFDSEKGWIPVEVT PGFESESKPSSQTTVQGQEQGGTTTAKTETPKKQTDRKTGNAAENQQIEKEQGDTPAGFA KVGLAALLVALPVLICVLQRRLRIAYRERQCLQRDAKKAINYSYRYLLSFMKDESLPKTI RALCEKALYSPHAMTRQEAELVYGYAQKQAGKLLHSSPLRKRWKLLYLRAIG >gi|312954455|gb|AENW01000053.1| GENE 96 94511 - 95443 748 310 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293402340|ref|ZP_06646477.1| ## NR: gi|293402340|ref|ZP_06646477.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 282 1 293 330 90 25.0 2e-16 MIRSWLAYLLLLLLDALAWISIDGYLYYLLLRVLLMLPLLSLLLFIAGNRFLKLQLKTSK KGCVIHMPTSLPLLVCSGIRIQGSWKNCFYESSETISLEVKHREQKLQIPKLGSGKYELQ LTSIQTRDLLGLFRKTQSWDKEVTTFCFPQPCTVTQVQYTNLLQEARQSLTGVFSSDYEL KEHHEGEPVRRIHYKASYRLQKTMVREFQKEESAVVLLHLCFPQEQEICERLLAIACGIC RKASPQDLVRIRWRTAGGRQTAELQGPQDMEGFLRKLLSMPRFCEVSRDSQDALYLDEAF AALFEQEAGI >gi|312954455|gb|AENW01000053.1| GENE 97 95440 - 96405 877 321 aa, chain - ## HITS:1 COG:MT3253 KEGG:ns NR:ns ## COG: MT3253 COG0714 # Protein_GI_number: 15842741 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Mycobacterium tuberculosis CDC1551 # 14 314 13 315 320 273 47.0 4e-73 MAEYLKGERMRTSERILQEVKKAVIGKDELLEKILMAILANGHILMEDMPGVGKTTIARA FADAMQLDCRRMQFTVDVLPADVTGFSVIDPQTGKTQIRKGAVFTNLFLADEINRTSSRT QAALLEVMEEGSVSVDGITMTLEQPFLVIATQNPYGSAGTQQLPESQLDRFMIRLEIGYP QEHDEIEILKRKQNPQSYRVQCVAQRTQILEMQKACREVFVHDSLYHYIIQLLQATRNNQ RIYRGASPRAGVALLDMSKACALLQGRDYVVPEDIQNVFVDTIAHRILMQPSHSIDAAAA KDALTQLLHHIQPPHTRRKGL >gi|312954455|gb|AENW01000053.1| GENE 98 96589 - 97233 530 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916324|ref|ZP_02078531.1| ## NR: gi|160916324|ref|ZP_02078531.1| hypothetical protein EUBDOL_02355 [Eubacterium dolichum DSM 3991] # 1 212 1 212 220 276 62.0 8e-73 MKYVNSRDLMMFLPQPITKLGVFEAETVDAALTMCADAFPKIEQEFKVTVDFATFKFQLL KTMGEFLYKCAECPHECLKNPRKHVEEERYIRNHIKLPLWPKRMQKNNAENFFLMEYILT YADILFRYLLDAGIPQEQANLIATNALDQLALWVDENCIRKCGYACIRRSESSGYCTLCS YMIQPLACPNKKEVTLRQLGMQEEDLVCMRREFK >gi|312954455|gb|AENW01000053.1| GENE 99 97339 - 97848 406 169 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSMFLIFYMLINSMGGYLFQQTAVETAYPDIARRCPDLTLHDTNDLVDGSGWISFLKGL DTVSLSTIRIKDARDSTQDFLIRYDALGKSYTLTRQDDSEHAVTYSHLIRMDGQRIADMQ LDDMCICFANNPAEYWYWYLCDDVNIKPQDIFREPNSTKAQLLFTVKKT >gi|312954455|gb|AENW01000053.1| GENE 100 98486 - 99427 639 313 aa, chain - ## HITS:1 COG:no KEGG:DSY5047 NR:ns ## KEGG: DSY5047 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 3 310 11 304 324 137 31.0 7e-31 MYLIDFNECQENNKAYGGMAGSKLGIIYQGEDWILKFPKSTKGMRKTEISYTTTPLSEYI GSHIYQILGYPVHETKLGTKDNKLVVACKDFTDSHVRLQEFREIKNYYNKELEAILVDTV TDSNSVGSTSLHAVKAHLNYNSLLYMIDGMSERFWDCVMIDGLINNNDRNSGNWGILRYS DGSLALAPVFDNGASFSTKISDEKINDMLKNEDRILSSAISTVTGYNIDGKALQFGALLK LEDKDIHNAVKRVVPQIQRHMDAITAFIYAIPNADNGIEIISEIRKEFYIKGMELRLQKL LLPAYEHTMRAVL >gi|312954455|gb|AENW01000053.1| GENE 101 99432 - 99659 202 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKSYHWINDSVKIDFALPSMIQELVDELEEMDRKEDWSYFDRCGFIENITKEFVINKEM TSKQRDILCQRYRGG >gi|312954455|gb|AENW01000053.1| GENE 102 100557 - 101405 564 282 aa, chain + ## HITS:1 COG:SP0506 KEGG:ns NR:ns ## COG: SP0506 COG0582 # Protein_GI_number: 15900420 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 13 276 4 262 265 103 25.0 3e-22 MDYTEAFEQIDIFRIHLIEEEKSTLTVQKYIRDITRLFAYLSSEKTLTKQCIIKYKEELM KSYTSVSINSMLVAINCFFTFINQPGYRVKLLKIQKRTCIEKERELTKKDYARLLKAAQD THNERMFLLLQTICATGIRVSEHRFITVEAVKSRKATVQNKGKLRYIFFPSRLRKQLLAY CKRKKITSGSVFVTNSGRPLDRSNIWKAMKKLCLHANVSSNKVFPHNLRHLFAFTFYSME KDVVRLADILGHSSIETTRVYTMTSFQEYEKTLSRMDLVRLC >gi|312954455|gb|AENW01000053.1| GENE 103 101801 - 102076 56 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEPQGRQERCLLQIEVRGSGTLFDGKAHHRNSSERYALFKGKRRTFHLYADQKHYAIQIR LNNKDITDSVHNGNIPIRSSSKVQQLVLYVS >gi|312954455|gb|AENW01000053.1| GENE 104 102267 - 102953 826 228 aa, chain - ## HITS:1 COG:BH0239 KEGG:ns NR:ns ## COG: BH0239 COG0860 # Protein_GI_number: 15612802 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Bacillus halodurans # 5 224 3 230 238 135 38.0 8e-32 MKRKKYLLGAGLLCTILAASFCLSHITSVSAKRAFHALDGVEIVLDPGHGGKDDGARSNE AKEQEINLKIAQKLKKLLEEGGAHVTMTRDGAYDLASEGASNRKREDMKKRIELINQDKT DLFISIHLNSYPNTSVKGAQAFYAPKNEVSKVFADIVQKHFRALTQTKMTSKPGDYYILN NAQKIGSLVECGFLSNAEDRAKLITDEYQQKVAQTLYDSILEYFNFLS >gi|312954455|gb|AENW01000053.1| GENE 105 103128 - 103496 198 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293402332|ref|ZP_06646469.1| ## NR: gi|293402332|ref|ZP_06646469.1| hypothetical protein HMPREF0863_02610 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 118 13 128 132 72 38.0 7e-12 MEETAQPIPNAQISVFRRDERGSIFIMECSTDEFGKTQRIELDAPDSSHSTDIHSLTRPY GQYDIHVAKEGYDTKVRNGVQIFADTDSTLTVIMQNSGVRSVSNTIDIGEHQLHEGGGCR SC >gi|312954455|gb|AENW01000053.1| GENE 106 103490 - 104560 1333 356 aa, chain + ## HITS:1 COG:CAC3244 KEGG:ns NR:ns ## COG: CAC3244 COG3409 # Protein_GI_number: 15896489 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative peptidoglycan-binding domain-containing protein # Organism: Clostridium acetobutylicum # 1 262 146 407 437 254 50.0 2e-67 MLEEIILPTTITVHLGRPTASAQNVTIGFVDYIKNVASSEIYPTWPYEALRANIWCQMSL ALNRIYTEWYRSRGYSFDITNSTAFDQAFVPGRNIYDNIAAVVDEVMGDYLKKPFYREPY YAEYCDGKRAQCPGLKQWGTLDLANRGYDSYGIIRYYYGDQMQFLETDNWQPYTPSYPGY ALRLESSGQPVFIIQELLNGIAVNYPNIPLIYPPDAVFGPQTESAVRAFQRQFDLTVDGI VGQSTWYQISRIYVAVRKLAELGSLGRLEGYFTGLWTGKVLRQGDVGIEVQQLQYFLSII SESYPSIPSVTVDSRFGPGLDRAVRAYQREFGLAVDGLVGRYTWNSIYETYAAIVG >gi|312954455|gb|AENW01000053.1| GENE 107 105099 - 105755 675 218 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01749 NR:ns ## KEGG: EUBELI_01749 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 218 1 213 213 81 28.0 2e-14 MKGLLIKDFKLMKNQKNFFFIMIFIAAAMLFAEFESTFVVSYFTMIASMFVLSTISYDEY DNGYAFLFSMPFSRTSYVKEKYVFSILVGGGAWLLSVVLSGILITIRNPQISVMDWLPID LLYICIVLLFAAVMIPVQLKFGGERGRVALLLTVGVAVLGSMGVIKLLEILQVDLDAVLA SMNTLNMMQIGGAAGIFSIVLLAISYRISCRVMKNKEF >gi|312954455|gb|AENW01000053.1| GENE 108 105752 - 106603 958 283 aa, chain - ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 280 4 284 288 152 32.0 6e-37 MLKLQNVVKNYGAFSLHCSLELKSGQISALIGQNGAGKSTTFKAILGLISIDGGEIEVLG KPVQELTPEEKEYVGVVLSDSGFSGYLNIKDILPVMDNMYTKFEKAEFLRQCQRFALPMD KQIRDFSTGMKAKLKALIALSHHAKVLILDEPTAGLDVVARDELLDLLREYMEQHEDACM LVSSHISSDLEGLCDDLYMIHEGKIVMHEDTDVLLSDYALLKMDERQYADLDKRYLLRRR KEPYGYAVLTSQKQFYMENYPQLTVEKGSIDDVIMMMIRGEQI >gi|312954455|gb|AENW01000053.1| GENE 109 106606 - 106977 466 123 aa, chain - ## HITS:1 COG:BH1164 KEGG:ns NR:ns ## COG: BH1164 COG1725 # Protein_GI_number: 15613727 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 123 3 125 135 89 39.0 2e-18 MKIIINNSSMTPIYEQVVEQIKAMILSEELEEGDILPSVRSLSKELKISALTVKKAYDNL EAEGFAVTVHGKGTYVAGLNRALVMEEHKKEIEADLDKAIQKGRSCGMEDSDLLELFHLL LEE >gi|312954455|gb|AENW01000053.1| GENE 110 107825 - 108745 709 306 aa, chain - ## HITS:1 COG:BS_dacF KEGG:ns NR:ns ## COG: BS_dacF COG1686 # Protein_GI_number: 16079405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 1 267 1 246 389 98 31.0 2e-20 MKRFKKLLLAGVLITGLVCYLRPMISKEDKVNLQIRNTEEQPIKISSELYSKNYILIRQK DSKVMLKEREEEAIAPASLTKLMTVYTALQHIDDLQKTVRIPASIFPQLEKEQASMAGFL PDEEVTYEDLIYGALLPSGADACMTLAISLYGSEDAFVAEMNAQAEKLKLKQTRFQNCTG LDEAGHVSSVRDIAWILDEALKLPKFAEAFHATNYVMAPSNMHPEGMTIYSTMRMTMDQN ELSQDDILGGKTGYTKKAGLCLATQARIHEETWLFVSAHASGSATTKPYHILDAINVYEA LARLYA >gi|312954455|gb|AENW01000053.1| GENE 111 109232 - 110365 1116 377 aa, chain - ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 119 366 100 346 351 166 39.0 5e-41 MKRTVWILLAAIAVVAGVYIAADLLGNGMLREFLSEQFFYMEEYTDTTGILHQYLSPNWY RIKQLFFLLTALVVVICIVCVRTQSSRVAMKHRAEIEKAMETALHQFLEDRDFYLPEGFG NIEALLLQIRAKEQKQLAMLEKQTRQKHDLISYLAHDMKTPLASVIGYLNLLNDVSDVPK AQRDTYIRITLDKAERLEQLIDEFFDITRFNLHDIVVSRGRIALDFLLEQLKEQFYPTLL AQHKELKLDIAEGSVCYGDADKLARAFNNVLKNAISYSYPNTVIRVAVKQEAEHILLEFH NQGDEIPEQKLEMIFEKFFRLDKARSTASGGAGLGLAIAKEIVEAHGGSIYADSNMEETV FYIKLPMPATDTELQSA >gi|312954455|gb|AENW01000053.1| GENE 112 110362 - 111051 804 229 aa, chain - ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 3 229 6 233 233 198 44.0 6e-51 MNILVVDDEKEIAGLVEIYLKNENYKVDVCYTGTQALQNIRTRSYDLAILDVMLPDMDGF SICRTIRQNYTWPIIMLTAKEQDIDKINGLMIGADDYMTKPFQPLELIARVKAQLRRYKR YNVQQKAKELSYLGLVMNQEQHICRLNEKDLNLTPIEFRLLWYLCERQGKVVSARELYTA IWQEEYLSSSNNTLMVHIRHIREKMKDRGEHPRYIQNVWGVGYKLGETL >gi|312954455|gb|AENW01000053.1| GENE 113 111441 - 111875 569 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400734|ref|ZP_06644879.1| ## NR: gi|293400734|ref|ZP_06644879.1| hypothetical protein HMPREF0863_01019 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 140 1 137 140 148 57.0 1e-34 MGKLCKILLVSAMLLVGGCSSKESEKKEPVSDNTEKTTLKITIQDEVNKKELFNGNVSVE GKVETLADFLEKAKDLGVKMEDGQYGKTIMAMKGVETKDFNKGPWWLYESENNESCKAAG SCDAASSLKIKDGDDFTFTYTASY >gi|312954455|gb|AENW01000053.1| GENE 114 111859 - 112371 381 170 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400733|ref|ZP_06644878.1| ## NR: gi|293400733|ref|ZP_06644878.1| cytochrome B [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 170 11 180 180 200 68.0 3e-50 MKARELCFIAVIASIEAVVFTSFSFILYLECITFTIVVFAMTFQTRQAVLGAVVFTILNL STQGVAPWSMMYCLIYPLYSLFIGCSRKFLNRHFLALVFTCGFLSFLTGQLVQLPFMLIS EKITVIYVLMGLKTSLIQGFMSMALCAICYKPIAAVLNHMERRLQNGKAM >gi|312954455|gb|AENW01000053.1| GENE 115 112368 - 112859 503 163 aa, chain - ## HITS:1 COG:no KEGG:ABC2982 NR:ns ## KEGG: ABC2982 # Name: not_defined # Def: hypothetical protein # Organism: B.clausii # Pathway: not_defined # 3 162 7 171 181 120 40.0 2e-26 MSVEYCAYPFLKEKSHLCDYEIATDRLASMLSVARHHIRHIPQEDLLQLMEMIYHANGSI RGACAIGEAELKKLNTFYARYHIEMDRFVLPDGCIGASHLHVLRAEVKAVIRIMHQIQCE GKPVEAILFDFMNLLSNTFFMMCLYENAQDGIREREFISRSYV >gi|312954455|gb|AENW01000053.1| GENE 116 113262 - 114260 714 332 aa, chain - ## HITS:1 COG:CAC0631_1 KEGG:ns NR:ns ## COG: CAC0631_1 COG2199 # Protein_GI_number: 15893919 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Clostridium acetobutylicum # 148 328 322 507 525 110 35.0 3e-24 MNHTADAKQFCHHLWHQYLEERSYEIPGGYFSPQISVIGTGKHEVSHSLQEFAVLLEREE KQWNGTFVIEQEAYQARQLSDNVYMVYGELDVNEDARDRINYELHFRFTIILQYTPSGWE LLHVHQSVPDINQCSDEFFPKRLIEQSNEQLREKIAQKTRELQESNKAVLYYSHHDYLTK LTNRYYCEKQIEEQLRNGKQGTILMMDVDHFKFYNDTYGHPVGDRILITLAQALQKTFSK DIVSRIGGDEFLVYCPRHLDNCMLEHILAQFREHWEDEQRQFPFTQHITLSIGVTYFPEH GSTYQELFQKVDTSMYNSKKGMHSYRIYADEE >gi|312954455|gb|AENW01000053.1| GENE 117 114625 - 115038 449 137 aa, chain - ## HITS:1 COG:SP1549 KEGG:ns NR:ns ## COG: SP1549 COG0242 # Protein_GI_number: 15901392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 137 1 136 136 120 48.0 5e-28 MIKEIVKDTFLLSRRCEAATLDDLQTVQDLQDTLQAHADHCVGMAANMIGVLKRIIVFQD GGSYVSMLNPVIIKTGDKRYTAEEGCLCHSTQKKALRYEKIKVSYMDCCGKKKIKTYEGF CAQIIQHELDHCDGILI >gi|312954455|gb|AENW01000053.1| GENE 118 115236 - 116303 658 355 aa, chain + ## HITS:1 COG:SP1899 KEGG:ns NR:ns ## COG: SP1899 COG2207 # Protein_GI_number: 15901726 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 141 278 146 277 286 72 30.0 1e-12 MQNMQHYYDFSGQKFGYPLSLSINSFKRQVFSRQSSLEISYVLKGAYEAVTEHFTAGIKE HELVIVAPNDIHMIRQMDNDKSVILTLHIDFSRFSAGMCGNIEEAFESMICTRSKNYRLL CRLRNKIGELVRMLLRGESSMFQMNAIMMELVYIASNHRQYPVERLPLQSVHHENYMKAI QYIDCHFSSELHLEDVAKTLSFSVSYTSKLFKKYTGISFVKYLAYVRIRASLEALLEGKD SIEQIAADCGMPNSKSYTAAFRELYGIVPSDYRKKFTQNIKMNENHKEQSMSFDIEQKEL LEHLIADTQEVLYENDGIKITQQEGHIQCRIQHELITKTTITQTDEELVMEVIRK >gi|312954455|gb|AENW01000053.1| GENE 119 116443 - 118389 1603 648 aa, chain + ## HITS:1 COG:lin0492_1 KEGG:ns NR:ns ## COG: lin0492_1 COG1902 # Protein_GI_number: 16799567 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 1 345 1 346 364 232 36.0 1e-60 MNTYHHLFSPIKVGHTTIKNRVFMPPISTNLADKGYITDELIQHYEARAKGGVGLIVTEV TTVEPTYIYLPGDMSIHDDSFIPGWKKLTDAVHQYGAKILPQLFHPAYMAFPIPGTPRLI APSNVGPSYAKEAPRPVTIEELKVIIRQFGEAALRVKQAGGDGVEIHAAHAHGLLGGFLT PLYNKRCDEYGGDINGRLKLTLEVVEEVRSVCGPDFIIDVRISGDEYSDGGLNLDDMIYV SKQLETHGADMLHVSGGTTIKRGSAIPAAGTKPGVHAHLSQEIKKHVNIPVATVGRITEP WIADELIANGKADICMIGRANLCDPDFANKAKCGKDDDIRPCIGCLRCLNGIMFGKRVAC TVNPSFELENEDTLKPAEVKKKILVIGGGPAGMEAAFVAKRKGHHVILCEQSDALGGLMK LAAVPIAKQDLSRVIKYMARRLMQAGVEVRLNCKVEKAMLQGEFADYEVIASNGAVPSII KAFTGFKQWATADDILAGNAFPGKNIVILGGGSVGCETADYLAPLVYDRYPRDRVITVLE MTKDIMVAESGPGRSLLVQRMLKKHVNLICEATVEKVEKDKIYYTKNGRTECIDDADTLI FAVGYHSDPTLKLLLEECGMTYHMIGDANHTGTIKDAIHDGYETARSI >gi|312954455|gb|AENW01000053.1| GENE 120 118605 - 119570 360 321 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225390429|ref|ZP_03760153.1| ## NR: gi|225390429|ref|ZP_03760153.1| hypothetical protein CLOSTASPAR_04182 [Clostridium asparagiforme DSM 15981] # 60 312 220 471 478 101 27.0 7e-20 MKKIKDSMVLQGIRAHSDTTKVHAFIDAIHQKQLTHQDIYEITKKYFVDDSRKTQECYAK LPQRKPERKVSFRWNIYRGRPRQIYNIASSLLKDIIYQIYPVESRLPRVLDLCEIYQVSE PTLRRAMSILQATGVIQPIGGKGMKVIQCEENRIHEMLEDNGVRERVIEGMQCLQILQLT CQAFTTMSFTSMVQRHEQLQQALSNTEITSINWVRLICEYCDSIMDVNKQESLKSIFEEL KQHILWVYPFICHLDKERYQSIFCHTFDVLRYAMKTRDGQLYVSEMKYLFYLVLEEVRSQ LEYAGVKEAKDLKMISFRMDI >gi|312954455|gb|AENW01000053.1| GENE 121 119521 - 120075 388 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|239628817|ref|ZP_04671848.1| ## NR: gi|239628817|ref|ZP_04671848.1| predicted protein [Clostridiales bacterium 1_7_47_FAA] # 3 164 2 165 482 96 29.0 6e-19 MKEEMSLHEWIYNYIEEAIRFGIFRQGEKLPTISQFAERFQVSRRPVIHAFKLLEEHHYI EMSRGRHSRLTLGLNEEECRENCIQFFLERKYAVQDLCEIRNILLPDLFTQALCLLKEEQ YAAIHKSIDQMQGERTVVAFVETVLSVFGNPLVCCLYMEVAIFGRLSFYEKNKGFYGVAG NSCA >gi|312954455|gb|AENW01000053.1| GENE 122 120769 - 121116 311 115 aa, chain - ## HITS:1 COG:no KEGG:Elen_1466 NR:ns ## KEGG: Elen_1466 # Name: not_defined # Def: YolD-like protein # Organism: E.lenta # Pathway: not_defined # 1 107 1 106 107 65 33.0 6e-10 MQNKQNHTSRAKLFLPFDSLKGFRDYLKCKERVVVDKKQLSSDACEVLDRKLQQIQKGQM VKIVYYDQQEYVEVEGVVSKFDPEYLHIIQIVDKVIHIRDIIEIQAENLKNISWD >gi|312954455|gb|AENW01000053.1| GENE 123 121106 - 122359 996 417 aa, chain - ## HITS:1 COG:pli0067 KEGG:ns NR:ns ## COG: pli0067 COG0389 # Protein_GI_number: 18450349 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 5 414 16 424 426 231 36.0 2e-60 MKAYLCIDLKTFFASVECVERKLDPFAVNLVVADPSRGKGALCLAVSPKMKEQGVHNRCR IFEIPDNISYITAMPRMNLYMQYSADIYGIYLKYISREDIHVYSIDEAFLDVSEYLQMYS VSAKELARMILQDIYTTTGITATVGIGTNLYLAKIALDITAKHAKDNMGILDEQLYRETL WHHKPVSDFWQVGRGISKRLEKYSVADMYDIAHMDERILYREFGVNAEYLIDHAWGREPT TIKEIKAYKSKSNSLSNSQILFEDYNYEEALLVLKEMVELNVQNLVESHRVTDHIGLYIG YSARNVKATGGSRKLSNVTNSYAYLRNAFIELYRETVNRQELVHMLSISFGNVVDEMYET YDLFTDFNALEKEKKLQLTLLNIKHKFGKNAVIKGMNLLNKATAISRNKLVGGHNAE >gi|312954455|gb|AENW01000053.1| GENE 124 122524 - 123120 578 198 aa, chain + ## HITS:1 COG:DRA0344 KEGG:ns NR:ns ## COG: DRA0344 COG1974 # Protein_GI_number: 15808003 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Deinococcus radiodurans # 17 190 34 207 220 66 27.0 4e-11 MQLKDLLNEYKCRMSVTNDYIAEHVGVNKSTVSRWMKGETKVMKPAVIEKLSYLLGTDVE SLLKNSDRFEKPLLGTAKAGYGLFAEENLAGYEEVSKSDYYRGDYFLRVCGDSMTGAHIH DQDLIYVKQCDDVKSGTIAVILIGNTEVTVKRIIKKEPFLILEAANPTVPARYFTQEEVR DLPVKIIGKVLYSRSDIA >gi|312954455|gb|AENW01000053.1| GENE 125 123167 - 123697 307 176 aa, chain - ## HITS:1 COG:BS_ywjB KEGG:ns NR:ns ## COG: BS_ywjB COG0262 # Protein_GI_number: 16080775 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus subtilis # 2 175 3 173 174 119 38.0 4e-27 MRNVTLFIAMSLDGYIAKKDGSVDWLQGQETEQDDMVSYQEFIQDVDTVIMGWNTYHQII TELSPERWLYEHLESYIFTHRKLIGKKNIHFIQGDICESILHMKRQEGKDIWICGGADII QPLIEQNIIDTYHISVIPIILGSGIPLFQGRKTILKLKLAASKSYNGITDLIYKRR >gi|312954455|gb|AENW01000053.1| GENE 126 123974 - 125074 844 366 aa, chain - ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 365 14 378 380 385 54.0 1e-107 MAKVLISPGKYVQGAGEMKKLGVYAEGYGTKALILISEGGYRRIGKDIENSFAGTGCTFI FDYFHGECSKHEIERLRGVMKKNTCNLVIGIGGGKIFDTAKAVAHYEKTAVLICPTIAST DAPCSALSVIYTDEGVFEEYLFLPANPNLVLMDTDIIAKSPVRLTVAGMGDALATYFEAR ACEQSDAVSCAGGKVTGAAMALAKLCFETLMEEGVKAKLALEAGVCTPAVEKIIEANTLL SGIGFESAGLAGAHAIHNGLTVLEECHHMYHGEKVAFGTIAQLVLENVEAAELQEIIEFC IELGLPVTLEELGAAEITKEKIMAVAKAACAENDTLHNMPFEVTPDKVYAAIIAADAYGH YFLNES >gi|312954455|gb|AENW01000053.1| GENE 127 125512 - 127779 1190 755 aa, chain + ## HITS:1 COG:lin2156 KEGG:ns NR:ns ## COG: lin2156 COG0178 # Protein_GI_number: 16801222 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Listeria innocua # 4 745 3 746 746 800 51.0 0 MKKQDSIVIRGLNQNNLKHVSLTIPKDKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETY TAFIRGRLPKFEKPKVDHIDHLSASVIIDQSRLQGNARSTVGTISDLYSAMRLLFSRIGS PYIGSASCFSFNDPSGMCPECSGLGKVIELDICKALDPEKSWKEGMVDLPAFHPGNWYYR QYTESGLFDLEKPLKNYSEQEYNLLLYGAYKRGDKRLNKRVEGIHNHFSRLLINRDHSGS SEVSKKRLEEMIQEKECPLCHGKRLNEHALSCKINGFTIADLCNMEFLKLRDVISGIKDA RVTTIIEALTASLSRMIDIGLPYLSMNRESSTLSGGEAQRLKLVRYMGSSLTGLTYIFDE PSTGMHPRDVYRMTDLLRKLRDRGNTVLVVEHDKDVIRIADEIIDVGPLAGRNGGRIMFQ GSYEQLLCSDTRTGHAMREQIRIKNQPRIPTEYLSINNASLHNLKHVSVDIPLHILTVVS GVAGSGKSSLIRDVFAKQYEDRVVLVDQTPITATGRSTPATFLDFSNDIRKLMANEHHID VGMFSFNSKGACPHCHGKGIVVTELVFMDPVTTVCEMCEGKRYSEEALSYEYRGHNIADI MELTVEDALEFFNDKPKIFRKLRTLHEVGLSYLSLGQPLSTLSGGERQRIKLAKHLKNKG NIFILDEPTTGLHASDIKSIMKLLEGFVERGNTVIIIEHNLDVMKQADYIIDIGPDGGTA GGEVVFMGTPKQMLEQADTITAHYLRKSCYEVTQQ >gi|312954455|gb|AENW01000053.1| GENE 128 127971 - 129584 1986 537 aa, chain + ## HITS:1 COG:no KEGG:BCAH820_4844 NR:ns ## KEGG: BCAH820_4844 # Name: not_defined # Def: collagen triple helix repeat domain protein # Organism: B.cereus_AH820 # Pathway: not_defined # 7 405 303 701 1219 263 62.0 2e-68 MLKMLEDTGITGPTGPTGPTGPTGPRGITGSTGANGATGISGATGPTGANGSTGPTGARG ATGPNGATGETGPKGTTGATGLTGATGISGATGPTGANGTAGPTGSRGNTGPTGATGNTG IQGATGATGENGATGATGASGEPGLPGASGPTGATGNTGPTGSDGATGATGETGAAGSTG ATGATGADGVSGPTGATGNTGPTGAIGVTGPIGATGQNGEAGPTGPAGNTGVTGATGDTG PTGNTGATGNDGNTGATGATGNTGADGIQGSTGPIGPTGSTGATGITGATGISGITGADG ATGPTGATGSTGANGITGPTGATGSTGATGLSGIQGATGATGNTGANGSTGPTGPTGATG AIGNTGATGTNGVTGATGPQGNTGVTGANGITGPTGATGSTGATATAQNGQFSVNASSIS SNSLITFSTAFINGTTISAASTTAINLSAGHVYQVSFLVKASVTVAGAIGVTPQLNGVSQ TGFATSANAALTAPTVSVSGTFLVNTLISADVQVSFLYTSSLLANSPSGVFSILQIQ >gi|312954455|gb|AENW01000053.1| GENE 129 129670 - 129990 250 106 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288870958|ref|ZP_06115911.2| ## NR: gi|288870958|ref|ZP_06115911.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479] # 10 103 12 105 108 97 57.0 2e-19 MDKFFITCMLGIAVGAVDILPMVKMKLDKYSIASAFVFYFTLPFIILNTELFHVVWWIKG GLIGGILALPMIIIVSKEDKKSGLPMLIMSTMLGEVIAILAHLFSL >gi|312954455|gb|AENW01000053.1| GENE 130 130232 - 130606 365 124 aa, chain - ## HITS:1 COG:no KEGG:DSY1255 NR:ns ## KEGG: DSY1255 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 1 118 13 130 130 104 53.0 9e-22 MKQELMDAITEKTKELMNSVTCCAEARAAAQTWLDAVGTQRIEEVTQAYMKELEEDIVTI QDLIALAESNQGKQIFGEEKAVQVAEHAKEIKQQGALYCDCPACTAAAYILEKKDELLKA VRDK >gi|312954455|gb|AENW01000053.1| GENE 131 130979 - 131623 359 214 aa, chain + ## HITS:1 COG:Cgl0234 KEGG:ns NR:ns ## COG: Cgl0234 COG1738 # Protein_GI_number: 19551484 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 197 52 231 250 102 35.0 4e-22 MSNFKLRLLIYFATISASTLLISNLAAVKLWNFFGIAVDGGVVVFPITYIIGDLIVEFYG KKIAKNIILAGFFINILAIIVFYIVIALPPYEGWTMQAAMASVLGFTPRIIIGSLTAYVC SNFLNNYIFTRLKNGNGFFASSFIARALGSSAFAHIIDCVIFETIAFIGVLTFQEFLAQA VFAYVLGIGFEIVFSPIEAFIANLLRGKITDDKL >gi|312954455|gb|AENW01000053.1| GENE 132 131610 - 132830 1049 406 aa, chain + ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 19 401 17 413 418 310 45.0 2e-84 MTNYKNNNTFSFEIIKRIPGKLGRAGIIHTPHGDIKTPAFMSVGTKGEVKFVSMEDLYLI QAQAMLSNGYHLRNASFEIAENGGLASWSGWNGPTLTDSGGFQVMSLGSGMGKVVSMKRE NDVINTDPKDRLAHVTEDGVRFHDPFTDQEDFIGPEESMQIQCRIGADIHMAYDELTSLA DSYEYNVEALARTERWAIRSINEHKKHCDDLGYHQSLYGVLQGGRWEDLRRSTAKRFAEM DFDGYGLGGAFLKESLGDILRWCCEELPETKPRHLLGLSHPDDILIGTEMGADTFDCVAP TREARHGKLYTKHGPIKLSKFTDSPLLLDENCDCPTCQAGWTRGELRALWKSGSTEGKHK YFNLATLHNLRFIIRLTENTRQAILEDRFAEFKEAFLKCYYPQSEK >gi|312954455|gb|AENW01000053.1| GENE 133 132987 - 133154 71 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLWRDNLCYGLTGCYCFKPTHMCLCMRKVQKSFLYTDEVMTDTIKHLLKLLLYWE >gi|312954455|gb|AENW01000053.1| GENE 134 133259 - 133798 299 179 aa, chain - ## HITS:1 COG:SA2335 KEGG:ns NR:ns ## COG: SA2335 COG0350 # Protein_GI_number: 15928126 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Staphylococcus aureus N315 # 1 177 1 171 173 176 52.0 2e-44 MLYKATYFSPVGKITLASDGDNIIGLWLEGQKYYGGTLTEKCITRENIPVFLSAKAWLDK YFAGERPLIENLPLLPKGGEFRQNVWKLLCQIPYGEVVTYGDIARKMAVVTGQPKMSAQA VGGAVGHNPISIIIPCHRVVGTNGSLTGYAGGIDVKIKLLTLEGADMKRLFIPKKGTAL >gi|312954455|gb|AENW01000053.1| GENE 135 134016 - 134168 78 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRYWGFEMNAADMISDTFVRRKIQKGRYAVFTHHGGLQTLSQTINYIWGT >gi|312954455|gb|AENW01000053.1| GENE 136 134104 - 134793 657 229 aa, chain - ## HITS:1 COG:BH3506_1 KEGG:ns NR:ns ## COG: BH3506_1 COG2207 # Protein_GI_number: 15616068 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 10 130 1 122 130 107 43.0 2e-23 MDSSVKEQLMDYKKVLEQAVIYIEQHLNEALSVEEVSKVTGYSYYHLNRQFIAVLGESIG NYIKKRRLANAAQKLLYTDEKIITIALDNNFESAEAFSRAFKSVYKVNPSTYRSNRIHTF ASGKQRLNDEKITHLMEHINVHPKFVELPEIEIAGIRNEVSLHQDELKEHWEAFYKLLPE QYRNRRRFGVYESCDNLTHYMIHEDMQFHEVLGVRDECRRYDFGHFCAP >gi|312954455|gb|AENW01000053.1| GENE 137 134808 - 135890 660 360 aa, chain - ## HITS:1 COG:FN0032 KEGG:ns NR:ns ## COG: FN0032 COG4927 # Protein_GI_number: 19703384 # Func_class: R General function prediction only # Function: Predicted choloylglycine hydrolase # Organism: Fusobacterium nucleatum # 16 331 9 312 329 80 24.0 6e-15 MKYTKATARTLYLTGSSYEIGFRLGDVISKDTVWRRKCVSHNNKMNQNRLEKINSLLDIW CPGLCDELKGIADALHVEPKDLYFYHMTHLVPNCSQIAVCFSITKEKKPLLARNFEFSDE IEDFTLIKTSVTGKYTHMGTSILAAGRDDGINEYGLAVTMTSCGMPVVDLPYMKTPCIEG LQYWIVVRALLENCRNVQEALSYIKDMPIAFHMNMIIFDKEEHAALIQTYAGMKAIRCIT TEEALLFTTNHAVLDDYKHLESGAFKHSVRRYQYIEGKLSNKTDITRNTLKEMLLSDYPE GLCFHHYRESFGTTKSMILSPFDNTIELCWGGLARNTWRCYSLDDIQEEQRDIALAVETD >gi|312954455|gb|AENW01000053.1| GENE 138 136224 - 136628 381 134 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229015546|ref|ZP_04172542.1| 30S ribosomal protein S9 [Bacillus cereus AH1273] # 25 134 3 112 112 151 62 3e-35 MAAKKNTVTYNGTGRRKTSVARVFMTPGSGNISVNGKTLDEYLPLETLRMVVRSPLELTE TLGQFDIKINVQGGGYTGQAGAMRHGITRALMEASADYRPALKAAGFVTRDSRMKERKKY GLKAARRAPQFSKR >gi|312954455|gb|AENW01000053.1| GENE 139 136641 - 137078 505 145 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167756118|ref|ZP_02428245.1| hypothetical protein CLORAM_01638 [Clostridium ramosum DSM 1402] # 1 145 1 145 145 199 65 1e-49 MRQTTFAKPAEVERTWYVVDGTGKTLGRLATEVASVLRGKHKPTYTPNVDCGDFVIVTNA DKIELTGNKLDTKKYYNHSGYAGGLRTRTARVMKDNYTVEWVERAIYGMLPHTKLGDKMR RHLFVYEGSEHPHTAQKPVELKIKG >gi|312954455|gb|AENW01000053.1| GENE 140 137564 - 138427 1035 287 aa, chain - ## HITS:1 COG:CAC0948 KEGG:ns NR:ns ## COG: CAC0948 COG1307 # Protein_GI_number: 15894235 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 4 279 2 276 281 221 42.0 2e-57 MNKEKIAVLVDTCCDVPQTFVEQYHMYVIPLKVVYKDAEYLDGVDITPEQVYQGLEREVP KTSLPSGERITEIFDQIRADGFQKVIAITLSSGLSGTNNMIHLIADQLEDMEVFIMDTKN ISIGGGFHAIQAARYIEDGLSFDEIKAKLMRGIDQCKVFFVVKTLEYLQKGGRIGLVASL FGNALNLKPIISCNDEGIYYTVAKVRGRKQSITKTKELALDFAQGHKRYNIAIMHGDAQE MAEEIRDCIMKKLPGTDVFIMKQVSPVLGVHTGPGTLGICVQILDEA >gi|312954455|gb|AENW01000053.1| GENE 141 138605 - 140464 193 619 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 395 604 16 229 245 79 28 2e-13 MAKQITGKKPKNMKKTIRTFLRYLGNHKFALLLVGVLVIASAGANLYGTYLLNPLIDNYI LPHDYDGLVRAVLFMGLIYAGGVLCTAVYKQLMTHTAQSIVKEIREDLFSKMQKLPLRFF DTNTHGDVMSHFTNDLDTVQDALNNCFDNLIQSFVMITGTLLAILLLNWKLSLIVMFFMV IMYLMIQYFSKKSKYYFSHQQAAMGKLNGFIEEMVDGVKVVKVFNHEQKNYEEFERRNER LRRASTEALTYSGRTIPTVVSISYFNYAIVACIGGFFAIGGEIGLGALASYLVYVRQTAL PINQFTQQLNFILAAMAGAERIFEMMEECEEVDEGRVTLTRVRKLETGRLQECQEYTGHW AWRHPHEDGSVELVELRGDVRFHDVVFGYEPGVTILKGINLYAKPGQKIAFVGSTGAGKT TITNLINRFYDIESGSITYDGIDVKLIHKDDLRRSISIVLQDTHLFTGTIADNIRYGNLH ADMDDVINAAKLANAHSFIKRLPNGYDTMLSGDGANLSQGQRQLLAIARAAIANPPVLIL DEATSSIDTRTEKLIEKGMDRLMENRTVFVIAHRLSTVRNSNAIMVLDHGEIIERGSHDE LLEDKGRYYQLYTGQFELD >gi|312954455|gb|AENW01000053.1| GENE 142 140464 - 142188 1780 574 aa, chain - ## HITS:1 COG:CAC3414 KEGG:ns NR:ns ## COG: CAC3414 COG1132 # Protein_GI_number: 15896655 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 1 571 1 570 577 515 46.0 1e-146 MLKRMWPYMSRYKKYLAISCFCVVAETVFELIIPIIMADIIDIGVANADKDYILIKGAQM IACALIALVLGILYARYAATAGQGFGAELRKDEFAKVQSFSFANTDHFSTSSLITRLTSD VTILQTAISNGVRPIVRSPVMLLTALVLTFTINAQLAVVFLIAIPVLGIALFVIVRRVGP LYRLMQASIDKVNTIVQENLNAIRVVKSYVRGTYEEEKFEEVNDSLRSASERAFRTSVWN LPLFQLVMYTTVVCIIWFGGNMIFAGTMKVGELTGFLSYVLQILNSLMMISNVFLMLTRS IASGERILEVLDEEVDIRDLPQATASVQHGDIAFDHVYFKYREEAEEFVLSDITLHIEKG STVGILGGTGSAKTTLVQLIPRLYDVSDGEIRIDGRNVREYPVEHLRDAVGMVLQKNTLF SGTIRENLLWGDAQASDADIAWACRIACVDEFISSFPKGYDTDLGQGGVNVSGGQKQRLC IARALLKRPKVLIFDDSTSAVDTATEASIREGLASLKDTTKIIIAQRVTSIQHADQIVIL DDGKIHAIGTHDTLLASDPIYQDIYYSQQEGAGL >gi|312954455|gb|AENW01000053.1| GENE 143 142220 - 142648 408 142 aa, chain - ## HITS:1 COG:CAC0197 KEGG:ns NR:ns ## COG: CAC0197 COG1846 # Protein_GI_number: 15893490 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 137 1 137 140 89 33.0 2e-18 MKTAFHFMMFKTFHAQRNRIRQNMQEFGLSPGQPKVLRYVAANRNCMLKEIAAACDVECA TVSRILNNLEEQNMLKRHVVETNKRALSMQILPKGEQALAAWETHCHQVEAESLQGFSEQ EKEQFREYLGRMYHNLTGKQLD >gi|312954455|gb|AENW01000053.1| GENE 144 143830 - 145833 1756 667 aa, chain - ## HITS:1 COG:lin2220 KEGG:ns NR:ns ## COG: lin2220 COG0577 # Protein_GI_number: 16801285 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 661 1 646 646 198 25.0 3e-50 MKFSKLALRNVKKSYKDYFVYFMTLMFSVCLFYTFNSFSSQEQVLNLSTSQSTVLKTVGQ FMNVLSVFVAIVLAFLILYANNFLIRRRKQEFGIYMLLGMPKRDISRILVYETMAVGFLS LLSGLLLGALCSQLLGIFSAGMLQVSMSFRVIFSIPSAITTSISFTVIFVIIMLLNTRVI AKVKLIDLLQSKKKMEKARIRRPWMSVLVLLISLTLLATAYYLATSSLQTFAVMLVPILV IGGIGTILFFMSLSGFLLQFIRLSKRTYYRNLHMVVLRQINAKISSASTSMGIVCLMLLL AIGALSCGFSLHHSLVDSVDQTTPYMYTYMQDENISEEAMKQLLNVQKAKRWNRVNVYTD RDTLKAILPLMEDYDTGKLYAGAPLEYISVSDYNKAMESQGNKPVSIHNKEAFFISAKED ILDALTAVGDAHKTISVYGHKLKLVNARETSSFLCTSPMPEIMLAVVVPDAVVQSKAPVR TYWNIDLAREAQVSAYQARVEKNITDYARQTGMQDYRYSGITRDEVRENSLGSGMLFVYI GLYLGIVFLVSSAAVLALQQLSDADDSKSNYDILRKIGTPQRMIDHSILGQIAIYFMLPL SLAIVHAMVGVPVVSGAFSFLFGLQNMWKTNLMTAGIVLLIYGTYFLITYYGYRMAVQGP RHKQKKQ >gi|312954455|gb|AENW01000053.1| GENE 145 146183 - 146482 298 99 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_4527 NR:ns ## KEGG: GYMC10_4527 # Name: not_defined # Def: YCII-related protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 19 99 13 91 91 64 38.0 1e-09 MEKYRYMMMLKKSKTYNRMTKKAVTEHVENIRGLDDAGKLEICGVFKGYPGMAGMYILKT DSREEAEALCEQEPLVIQGYATYQLVTLQIADRENNYLL >gi|312954455|gb|AENW01000053.1| GENE 146 146577 - 147104 270 175 aa, chain - ## HITS:1 COG:no KEGG:Sterm_1580 NR:ns ## KEGG: Sterm_1580 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 157 44 203 225 178 50.0 9e-44 MFECKLISKGAGTYFIPVSKAVAQQLNSDGEIPVSFEIIRELTRINKNGPYTTDHPVRKI DHIQEVVYPKPGYCGQICIAMLSGLPIEEVIDFMQTKPWQCSLSRVMEALHYFGISHEDR MTYTRGTAFAFPKCCIVTVRDKPKNHLALYYNGRFFEARHIEFEDIIGYLTIHTG >gi|312954455|gb|AENW01000053.1| GENE 147 147422 - 147883 400 153 aa, chain - ## HITS:1 COG:no KEGG:BVU_1494 NR:ns ## KEGG: BVU_1494 # Name: not_defined # Def: hypothetical protein # Organism: B.vulgatus # Pathway: not_defined # 1 151 1 165 166 105 33.0 5e-22 MKDFYEALASSERNAAIPKEDDFFGMLIGSWYIDYMDTATGAVRKGEWHFSRVLEGMAVQ DVIVLPHFEYGTTLRMYNPATRTWEIAYGYTGRIMRFEARKQEDRIVLSSLEDEHRKWVF AEIAENHFHWQDIMVQQDGEWQVNYDLYAKRME >gi|312954455|gb|AENW01000053.1| GENE 148 147965 - 148576 576 203 aa, chain - ## HITS:1 COG:PA0749 KEGG:ns NR:ns ## COG: PA0749 COG2720 # Protein_GI_number: 15595946 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Pseudomonas aeruginosa # 1 201 73 273 273 159 41.0 4e-39 MNLRLAVEKLDGIIVYPQETLSYWKTIGKPSASKGYKKGMMLKDGTIVYGIGGGLCQLSN LLFWITIHTPLQVVERHRHGYDVFPDANRTQPFGSGATCFYPYGDLMISNPTDQPFQLRL HVGKTHLHGEWRMLHPLQVRYEIVERNHEMRREWWGGYSRHNQLYRLMLSKEGTLLEEQL VAENHAMMMYQPLLDAQVKENNV >gi|312954455|gb|AENW01000053.1| GENE 149 148619 - 148804 347 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKKQEDLRTKKRSDIRLMLGGWYYTWRRYIGWYTSKRQFASGHGSEDYPNVCFQHKSLL K >gi|312954455|gb|AENW01000053.1| GENE 150 148880 - 149221 369 113 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3526 NR:ns ## KEGG: Cphy_3526 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 112 10 118 124 87 41.0 2e-16 MNPDDIWLSLMHLFSRSCHQKAERSFFIHGYQCPVCARCSGLYLGYGFGILLWMFSVTLP LAVYGLFMLSMLIDWGLQAADVLPSTNVRRFVSGVLCGIAVIGIFHALLQAIF >gi|312954455|gb|AENW01000053.1| GENE 151 149218 - 149439 179 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|254519005|ref|ZP_05131061.1| ## NR: gi|254519005|ref|ZP_05131061.1| predicted protein [Clostridium sp. 7_2_43FAA] # 6 71 8 73 76 65 59.0 7e-10 MYRNYDHVYCPSCGSRNLRIIEERNNESYNLPSGILGAICFGPIGMLCGLCCADGERRRT ICICNDCGTRFNR >gi|312954455|gb|AENW01000053.1| GENE 152 149722 - 153018 4092 1098 aa, chain - ## HITS:1 COG:no KEGG:TherJR_0594 NR:ns ## KEGG: TherJR_0594 # Name: not_defined # Def: SMC domain-containing protein # Organism: Thermincola_JR # Pathway: not_defined # 3 1065 4 1082 1099 427 28.0 1e-117 MKLKKMLLVNWLYYEKTILSFEDIVFLSGKTGEGKSALIDAMQLVILGRTDNSIFNKSAN DKTTRDLMGYLKGKYKDGTFKRDKGMFSSHLCMEFEDEQHRIYCFGIVFDVNGPTRGDTE HCYYMMNQPIPGHCFTDEGTVFNIRRMKKLLASFQDRSCRSFTTHMDYKNYFRQRMLIKD QRFFDVFKMAVAYTPMMNISEFIVKNICQEEEDLNLEEMQEEIQDYRQMKEQLETVQQKK AQLSLIHEQYTDICGEQERVANLRVEQKAAVYHGMLVEHDEAAAQYEVYTKSYQKLTKES RETEEQRALLEQNMEALRDARRDNAADILERKIQAHLEQRNTLQRDTTAVQQQLVTKGEF LKEQIEQLEEIEDYDGLQLEDFDLSGVKLSIQRSVHAAQRLAAFDLDAYRDIQRQMRDIE NTLSTVRQTMQSSLQTCREEQEVLAANRRALEAGKKTYPKKLLVLKQELEERLYQQVGKP VEVCILADLFSIQEEAWTNAIEGYIHNQKLNLVVEAEYFMDAYRIYRSIKEEKKIHTYSI VDIAKAKPGKRPDAKTLYDCVQVEREDVRPYVEYLLGRVVCCEAEETLRSYPVSITSDCM LYSGYAVSHMNPELYKVPFIGADSIEKQLQELIIRQQKLTSTCRKLETVTRTLQAVQLQT VISDDFIRQLEDGLCKAKEVEQLEQKIKELRDAQTPESLQELLLLDQKLDEAKKKKNELY MLQVEQESRRRQLEEDMKLCNARIQELQQQVKEAKKPEQGIPDTIGAITTADGIRRKQKQ LEEALRELNSRVEISKLELITKKTHYNDTFRIALNPNFLCDDYEREYEKHSDNIVEDYID KCRLAQQKAYECFQNNFFSALNSKIENVRMQIDRLNRSIRRHKFGRSSYEFVCTCNEDYR EYYNLITNKELNGHNLLNTKVYEENEELIHELFDKISSLSSMQDPKKYQELQKEVQLLSR FTTYLKFDILENGNSLRATIGSSSGGETQTPFYVAVLVSLFSVYDAGNDGLQLAIFDEAF DKMDNERIEECIYLLKSLGFQAIIVTPTDKISNLSKVADATLIATTDEKNGQRVSTVQKW SQKENIAIPDSEMRQEEV >gi|312954455|gb|AENW01000053.1| GENE 153 152954 - 153622 697 222 aa, chain - ## HITS:1 COG:no KEGG:Dred_0582 NR:ns ## KEGG: Dred_0582 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 4 207 7 207 210 76 28.0 8e-13 MKVEQLDLKDREEFGRIVNILLAENCIYQYAKIRQFEKKERNADYVFIHDHWDCFEEYLR YAGWLLCRERSSYMGMIYLVNEREDCSCRYRLTKLETQLLLILRNYYEEKMLELDASLTI RISVNELLQLLVDVHAMVSVRPSMQYIHAALQSLQRLNILQKYTQGDEELIWVLPYITCV LTPKRVEEILMKLRNEEGEEDDEAEENAAGQLAVLREDDPEL >gi|312954455|gb|AENW01000053.1| GENE 154 153619 - 155043 1689 474 aa, chain - ## HITS:1 COG:no KEGG:Amet_2150 NR:ns ## KEGG: Amet_2150 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 1 440 1 436 464 93 23.0 2e-17 MSLFEKMDPSFFTILVSKNRDIYVDLLLQIHDCIYRNQTMSMERALLQDLLEDYVQDKKY EIDFQEEAEYSDIENELRSEKDVYDRDIQFLLRLFEKHTWINVDLHMDTMKKMVSLPYHS RVFISFVNDIIKEREQIGYLIRIHASLKDMDDPVKIEDSYQHIRNAYADFKELILTLEQT NARIRDYYAIQVKKASTKIYHDFFDVYYGDIVEGYVFPTLVEDSLKRFKNPVAGILETLL QEEAVKEKIVDSAVSHYRVASRDTAKKHIEEMLYAMYNDLNIVETLTAQLVDSDAGYRRL AKQKIMYLCNSDQGLKGKLVELIHHMKEEPQRVCEQISESINIQQTRYMERDEVYTFERR RRRDEREVMTFTFEESTQNQEELEKRIGFDRYARFTRESISAYYAEKLHGEAVGKLKDIG VKDMDDYIRSILVYVYGRDRKMDVQATLIPNQTEGITEGDFHYPNLLIKRKVTK >gi|312954455|gb|AENW01000053.1| GENE 155 155355 - 158603 3765 1082 aa, chain - ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 1082 1 1136 1136 665 37.0 0 MKKKALLKDTLREIRKSFGRFFSIFAIVGIGVAFFAGVRDSVPVMKNTADTYFDDYNFMD LKIMSTIGMTKEDVSAIRQVDGVAGVYGSYSMDVLNTHNNQQRVYKLLSYPMNAKAEDEN YINQMRLIKGRLPRKADECVIEYTNIKGADSRIGEMITFASGTDEKLDASLKRSTYKIVG EVTMPYYLSYEKGSSAIGSGSIDNYAVIPDTNFKSSYYTEVYVTVDGAKKPNSYADAYFD IIDPKKTTITALGEERAQERFDDIKKEALAKVEAGRKEYEKNKKKYETEIKNAKDKLENA KDELLVGQATLNAEKSSAERTIQEKEAQLQQSEQTLSQLKSQYSSAKSYLDAQQKKLDDN LPQIQKQIAEAKAKLSSLDEELAKVDTQLQDPNLTELEKQLLQEKKAALETSRQVASPAL TMLEAQISTMQEMVTMAASQLHALETQIATAQQQIETGKQQLASARVSAQQESAAAQDKI TNGQKEIALGKLELEKQERDGAAKLQEAKEKLDRSEEDINSMETPKWYVLDRHSHYSYMD YGSAADRMGAIAKVFPLFFFLVAALVCLTTMTRMVDEERQEIGTLKALGYSKPDIAMKFV AYAAIASILGGICGAVIGMIVFPTVIFNAWGIMYTLPDVQLQADIGLAALAIGLASVITV AAALAACYKELVETPALLMRPKAPKNGKKILLERIPFIWKRFNFIYKVTARNIFRYKKRF LMTVIGISGCSALLVAGFGIQDSIGEIAVKQYGDIFKFDVTMTYKGEDTLSQKEQDLNEL QKDSRVKSATAMAVYHGFYADEGEDKGIDLYVPQDVESLHTYISLRQRGSNEAISLNNDG AVITEKIAKDKHLKVGDTFPIDNGDGVKKDVKIAAVTENYVGHIVYMTPSYYKSVYHKTP QNTGMFAIMRDSSEKDEQALGNAFMKKDTIDSVSFYSGIAASFQDTIASLSFIVVVLIIS AGLLAFVVLYNLTNVNISERLREIATIKVLGFYDKEVSAYVYRENIFLTLIGALAGLVLG IVLHSLIMSLAELDTVMFGRNIEKLSFLYSVAITMVFAIIVNLVMYRKLKKIPMVESLKS VE >gi|312954455|gb|AENW01000053.1| GENE 156 158605 - 159309 311 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 203 1 204 223 124 38 4e-27 MSAYIEFQNVKKIYKMGEVEIQALAGVDFTIDKGEFVVIAGASGAGKSTILNILGGMDSS TSGNIFVDGTEISKFNAKQLTTYRRYDIGFVFQFYNLVQNLTVKENVELATQICKQPLDI DETIEAVGLKERASNFPAQLSGGEQQRVAIARALAKNPKLLLCDEPTGALDYNTGKQILK LLQDTCRQRGVSVVVITHNLALTAMGDKVIKVRNGKIDSITINEHPLPVERIEY >gi|312954455|gb|AENW01000053.1| GENE 157 159622 - 159954 439 110 aa, chain + ## HITS:1 COG:CAP0153 KEGG:ns NR:ns ## COG: CAP0153 COG1695 # Protein_GI_number: 15004856 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 107 5 109 115 103 48.0 7e-23 MLPSQMMKGILDNCILIVIAQEDTYGYDISQKLKSYGFSNISEGTIYPLLLRLEKNGCIN SEFRKSAYGPNRKYYTITKAGHLEIQDFMKHWKELQQGVAAVMGGYAYES >gi|312954455|gb|AENW01000053.1| GENE 158 159944 - 160624 655 226 aa, chain + ## HITS:1 COG:no KEGG:Mbar_A1496 NR:ns ## KEGG: Mbar_A1496 # Name: not_defined # Def: hypothetical protein # Organism: M.barkeri # Pathway: not_defined # 1 189 3 194 233 102 34.0 1e-20 MNRNMRMLHNENNRLDKTLCEDYQRLMTDIVCYLRGADISELQQEKVRYDLTLMLLEAQQ RNAPLDEVFPEDYKAFCDTVIKELPPRSQLEKLRERLQIVFLLIAILGVINLFLSKDGLH ALLQLDIQSTYPLSLSTLLLDILLGISAVCIVQWICRSSFENDDKAVKRRLLLLWLFTLC ISVGCMLLFQNIIVLRIPVWLFVLFCFSSYLLYLALAFCSCKDVAS >gi|312954455|gb|AENW01000053.1| GENE 159 160621 - 161397 351 258 aa, chain + ## HITS:1 COG:BS_yybG KEGG:ns NR:ns ## COG: BS_yybG COG1357 # Protein_GI_number: 16081117 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Bacillus subtilis # 8 254 15 278 279 174 39.0 1e-43 MILEELALYADCSLCRGLCCRALYFSKLDGFPQDKPCGVSCSYLCSDHTCNIHHELKQKG MKGCLGYDCLGAGQFAVQKNVPANQDMFAVYRKLFSLHQMLWYLGEALLQKETASFHGEL QMLIQTLDTVRRQPWKTVLTADIDSLHEQTNRLLKKTMQQKQLRHPSPHKHPMGKRFTNK RLRSTDFSMKSLLAADLSGCDLQGSCFLGSDMRDCRIAGSDLRNCFFLTQMQLNTAIGDS LTRLPNHLHIPAHWNTVS >gi|312954455|gb|AENW01000053.1| GENE 160 161616 - 163820 1988 734 aa, chain - ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 268 723 287 749 776 200 31.0 7e-51 MQSKGKANSKADIQHDHLTALWNKEAGEELLDSCIRTAKAQSTSFLAVLLDINDLDTINK RCGHQEGDRILQRVAEKIRSSLQTGDFAIRLGGDEFLLVFQQLSKKEVRNLLDQILNELE EESREFPYTMGFCFGITQIMADMELSVKKIIMRADDEMYLSKRRYHLEQSRKAFALRPYH ESEEVRQFSYDKDLLLSALMQSSDDYIYVCNMKEDPSCFRYSRAMVEEFDLPSEIVHDAA NVWGARIHEADQKIFLEGNQEIADDRVDFHNVEYRARNRRGEWVWLRCRGHVERDEDGQP VLFAGIITNLGRKNKIDYLSGQFNKYELEDTLQMIVAKEEHFFMMILDLDGFSSINKLYN HQFGDEVLAKTAQIIQSVLPEYARLYRNDGDEFIVLLRSCTDSNEIAGFYHRLQQELGHQ RILNGKKYHCTISAGCACFPKDGDDMMSLTKNVGYALEASKRNGKNRLTFYEKKMSETEL QELDMLEQLRYSMEHDFEGFSLQYQPQVEADSGRIIAAEALARWHSSMYGNVSPVVFIPL LEKSGMILTIGKWIFETALRQCAAWLKKCPDFCVSVNLSYLQLYEEGFITFMKETLKKCH VPSRNIIVEMTESYMVKSSEELQAIFQEIRSIGVRIAMDDFGTGYSSLGVLKNSPADIVK IDRIFIKDILNSEFDATFIQFVVRLCHDVNIRVLLEGVETKAEYEKVKTMGLDDIQGYYF GKPMHPEKLEELLR >gi|312954455|gb|AENW01000053.1| GENE 161 164047 - 166014 2193 655 aa, chain + ## HITS:1 COG:CAC3683 KEGG:ns NR:ns ## COG: CAC3683 COG0768 # Protein_GI_number: 15896915 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 26 653 19 668 671 410 37.0 1e-114 MTDKKKLWGIAGIVAAVAIVAVAAYFLFSGGSKPESVLLSYTDLLKEGKYKDMYSLISSD AKKKWKKEDFITRNKNIYEGIDASDFSMEIKDSSDTGDDGSEISYHVRMKSAAGTIDFDN KATVVKEDGDYRIVWDSTQIFPQLHDSDKVNVSVTEGERGSILDRNGKALAQQGSVFQVG LIAGKLGNEADTVSAMARVLDVSEDSIKKALSASWVQDDMFVPIKTITAAKRAEIIEELR KIVGAFVQETTGRVYPYGEMTAHITGYVQNVTAEDLEKHKKEGYTATSIIGKSGLESIYE SKLRAVSGCKIIIVDENGDLKDTVAEQKARNGQDIRTTIDIEAQRSAYNQLKKDAGSAVI INSHTGEVLAMVSTPAYDPNDFAMGMDSKTWDSLNNNKQKPLLNRFVSTYCPGSTFKAIT GAIALDSKTITAETTFEKTDKWQKDSSWGKNYVTTTQSYTEPSNLKNAYIYSDNIFFAQV ADKIGAETYTSYLDKIGFRKQMDFPFTVAKSTYGDELENAQKLAATGYGQGDLLVSPLHL TALYTAYVNDGSILQPYLVYEDGKAKTMVKNAYSAATAKTVFEDLQASMSGYGDNPTKAA GKTGTAQVNHGEQEIGWLSAVNDNIAVTVMIDDTKDIGESHYVIPKVQSILNEVK >gi|312954455|gb|AENW01000053.1| GENE 162 166153 - 166518 208 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 119 1 123 126 84 37 4e-15 MAFRIVHCNINVTDLNKSIAFYEQALGLQVARKLEAEDGSFTLCYLQDDTGSFQIELTWL KDHPQPYELGENESHIAFATDDFEAAHRLHEEMGCICFENKEMGIYFIHDPDDYWLEVVP A >gi|312954455|gb|AENW01000053.1| GENE 163 167164 - 168561 1048 465 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225377762|ref|ZP_03754983.1| ## NR: gi|225377762|ref|ZP_03754983.1| hypothetical protein ROSEINA2194_03413 [Roseburia inulinivorans DSM 16841] # 330 462 438 563 567 68 30.0 1e-09 MALAMLFMMSGGVSIHADEVSAETPLTAQEKAAPAASLDTMALKNADATLKTEADGKLTL TVRAKDGYYFTDSPLARSDNSNVTIRRKSDSTAMVYNYDVSIYGDVTDSYTISVKGEAVV LTSSKLILNIDNLKNATATLEKNEGVTPLDNVILTLNADEKTAFESVPYAVIDGEKRAMR SFADEKTMYTLSIMNIHKDTTIEVYGTAASTEARGTLDRIKVTGYVNEEIASYSTITLTN AAFHKLAKGSDISSWFYSLPKGMRVIAADGVAKGDTRMQIKFCGKPTELSNASIDIMIED QYITNSNNGILKVDPAGSTWLIQARMKTPVITKGNQTYIMGSNKPLELICSGELRDLYGI FINGSALSSDYYTLTSGSTVLTLKPEYLNTLEKGSYTVRFTYHDGNYAETKFTVGDKKQE ASKQTNQEEAPNTADATSTGLLLVTLLTSGAGMAAVSAKRKRARQ >gi|312954455|gb|AENW01000053.1| GENE 164 168899 - 169030 172 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYEGFYEKSSGYAMAAGMLLNTMSLLHANDNSVQADEGAKGTT >gi|312954455|gb|AENW01000053.1| GENE 165 169400 - 171133 1921 577 aa, chain + ## HITS:1 COG:jhp0277 KEGG:ns NR:ns ## COG: jhp0277 COG4866 # Protein_GI_number: 15611347 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 32 289 33 284 290 95 28.0 4e-19 MKKLTLENWQELQPYIALADYHEYNSNTMTMLMWTSMYEVYFETYPDYAIAYTCMPHREP VWLMPYCTRDHRFEAVHAIRTYSQKHGIAFEIHSMTKEFKNWLVDTYPMEFLIWDCYDAR DYVYDRRQQETLSGKKMQKRRNHFHAFLKQYEGRFVYRQLDESTREDVYAFLRYWQSFKD VDDSISAEDTGIHLLLEHIKELPIEGGCIYIDGRLEAFNIASRLSKDMIQIHVEKANREI RGLYIAILKLYLETLEEDIVYVNREDDMGLPKLRKAKTDMQPVCKIQKFGSAHQALKIQQ ADAAWTRKIRSLWEQQFQEETAESTQFYFERLYREENCLLLVSEEELICMLQLRPMTIVL DGKDVRVPFVVGVATNPEYEGCGYMGMLLRYALKTVQGKAPFVLLQAYNWDLYKSFGFIE QYQRVRWKLKKQSDAADGGTWKQVEDAQDLLTLYLYFCEQKNGWRRRDLAYYKNQFLPNA AIWNQKIRVYWEDNQPRGYIVQEDSAQELHIRECIYADEEALQHMMRYLAQEEKTVYVDL DTEAQVEGRRKPETCMMVKQLDKQTFPQDCLFIREEL >gi|312954455|gb|AENW01000053.1| GENE 166 171366 - 171818 661 150 aa, chain - ## HITS:1 COG:UU063 KEGG:ns NR:ns ## COG: UU063 COG3613 # Protein_GI_number: 13357619 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside 2-deoxyribosyltransferase # Organism: Ureaplasma urealyticum # 2 149 5 158 158 66 29.0 2e-11 MLKVYVAGSLFNEAEVAQRKAEGVMLRREFPELDIFNPIDQPFNENKQSLPTPEMIYEGD TQAVEACDIFIADLTNEDAGVMVELGIAIKSDTKIIIGINSDIRLQSANCYAVPTMGMNH YVLGAILKHGYFVRSFAEAVEKLKELLKEA >gi|312954455|gb|AENW01000053.1| GENE 167 172311 - 173990 1826 559 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0322 NR:ns ## KEGG: ECO111_0322 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 4 180 2 179 180 116 37.0 3e-24 MKGYQLKITLKGTSPPVWRRIWIPADMTFRNLHEAIQYLFGWMDYHLYDFEIAREHVKIL CDDGEAFEFERDTVFKDMDTPLHTYLKEKMKLVYTYDYGDNWEHVILVEKQSEEAQSQIK LLKWKQDNLAEDAGNVDGYQEIVAKAADETNEEHEKMKNWLEMQHIPFDEEMVREDLASI TQEDMYFTLSPEAGMVLNEALAAFIDQLDKMELCGMSLITADDQETKKVLVIAQYEEGYN MQLYENETDYMRGVESTPELPGYNLYANGVSIICLDQGFQRGDGWVSEDGTCIVKIMQTG YLPMDPDDEAAYEIANDLHDFLDILQSCGHRNLPDYNEGRMLSGIWKKDGTLDISYPEIR MLNESITLHLQPDQAALLNRKKKTIRELQVDLIADLLETVADIRLPLYLTLENEDYQLKI PLDDESYRGFEEMNRSVVSLLCGFMEEYGRITTIIVNNDNMAQMLSGLCEDLSIKLRIED FMSEAQKLMMEEDLHHDFEMLNTLAGMSEEEFYQFLDQLDEHQLEGFSQMIEQYMDKYGL DSEHDSPLPKLKAKKHFDA >gi|312954455|gb|AENW01000053.1| GENE 168 174518 - 175321 610 267 aa, chain - ## HITS:1 COG:mlr1196 KEGG:ns NR:ns ## COG: mlr1196 COG2207 # Protein_GI_number: 13471273 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 170 250 190 270 276 64 33.0 2e-10 MKLKQDIQDCLWKTDTHTYLLPHPLLRPYIAHYTICHSHYMITEQLHLVPDISGCIVMNM KQDSGLDLKYWGPTTRMVTVWKEEGEDQVQYFVEFRPSGSHALFLADQYPYRDMRIELKQ VNHRCHALIMEAYDKAEGEASFFQQLDTIFLSMMNKQDDAMAALMQGLSAKTRIADVMDS FGYSRRHLQRLVQQRLGCSMKTIQKIQRINQAVSLLKEQKLTLTAIAQQCGFYDQAHFIH DFREICNVTPQQYQKQLQDYYNESFKF >gi|312954455|gb|AENW01000053.1| GENE 169 175323 - 176168 826 281 aa, chain - ## HITS:1 COG:SP1557 KEGG:ns NR:ns ## COG: SP1557 COG1307 # Protein_GI_number: 15901400 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 279 1 279 282 147 33.0 3e-35 MKTAILTDSGSAMTIQQAQEHGIFLLPLQVIDEEHSYQDGVDISTEELYEALRKQHTPKT SMPVGSVIEATLRTIKEQGYEEIVSVPLSSGLSSTFNTIQVMAREIGIPVIHIEDFTTCD LQGHEALLAKRYADEGKSGAEISELLSKLIRTSGTLILPNDIQHLKRGGRLTPLAAAAAS LLKIKPVLIIDPSTQGKIDVLEKVRTEKKAAAHAVDTISKKLAGREGYVYVIHSDCLEKA EDIRRQLLERNSRLEIRINTISAVIAAHTGLDCIAIQYIEK >gi|312954455|gb|AENW01000053.1| GENE 170 176613 - 177470 691 285 aa, chain + ## HITS:1 COG:lin1660 KEGG:ns NR:ns ## COG: lin1660 COG0115 # Protein_GI_number: 16800728 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Listeria innocua # 1 285 1 285 289 220 41.0 2e-57 MKYLWKGSFVDKEDIHIDLHDRGYQFGDGIYEVTHVYNGVLFALDEHIDRLINSAAFIEL NLRHTKDEIAAFCRGLVEQNHIENGYIYLQVTRGDGTLRNHGFSMYEEQQPVFCGFAQSS TRSEEKMVKGADAITVEDRRSLMCNVKSLNLLPNCLAKHAAQKKGVSKAIMVRDNIVTEE KSGNIFIVKDGIVLTHPNGGKILPGITKQLIIELLHQHNIPVWEKEFSEEELLHADEVMV TDTNSEIVPVIKVNDIIIGNGARGEITKKIQMLYKSLIEEKCGKL >gi|312954455|gb|AENW01000053.1| GENE 171 177535 - 179961 1548 808 aa, chain + ## HITS:1 COG:CAC0382_1 KEGG:ns NR:ns ## COG: CAC0382_1 COG1221 # Protein_GI_number: 15893673 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Clostridium acetobutylicum # 21 333 7 313 423 64 23.0 9e-10 MKKSRRSQLLQHIAEITSIAIANKEYTGINTDAFTISLDLNLDRANVSRMLNDLWRENIL IKIQGRPTFYLHRKTLLKRYPNSYIPALIPKNEELATYLEHSLVLSQETAKEAFTSCIGH SIRESMYPIIEDIKVFLTYPQTMRSIMICGPHKSGKHHLLRCIIQYLKIDTEQLLHIDCA AIALGKLTISDIMQRIDTSLDQEKSNIILFENLDALTELPASITTMETLLRFYQRMAESN ELNLLFLAVTAMNEHFLQLQKLFQKVYELPDLNSRTLKEKYEFVLHFMQNEADAIGKTIS LSSSILNCFATACYPGNLQYLKQELRHALSYAYIQSSQQQETFITIDYQHLSDELLASIR NVSDILPIIESITSTLQEKNHFLIPETECIPLQKLLHSCIQEDGILQAFTHREPRLSEYC KQELRNAAKLEINQLYSLSLQKIRDCIQQVLDKHAFTIQEKQLDKLCIRINNLFSILKHH SYSTAFVPDMDMQDTAIQLLCEEICEALKQTFDRKLPDMEQLFMYCYLLYSREHHIKGSI AVLVACQGEGIAEKYATHVNTMKYQVKCRYIDETGTASTRNLTAFLSTVVDKVREIDEGS GVVIITDFNPLLDFDSEIRSSTDIETVTLSPTSLPLLIQVMNMVNNPSIQLEDIRNYDYG TALQIPQSDSTGYGIEIQKTLDDVADKILSESLVFLNPKKATMALFRVLMKIYEDLGLNY TDEISIRFIFHSAFMIERVIRREPLIYKNTNSIISTSREVYTSIDRNMELVNDVFGISIP SSEIARLSEIFVDLINGCEQEECRTGID >gi|312954455|gb|AENW01000053.1| GENE 172 180306 - 180935 823 209 aa, chain - ## HITS:1 COG:CAC2973 KEGG:ns NR:ns ## COG: CAC2973 COG0800 # Protein_GI_number: 15896226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Clostridium acetobutylicum # 1 190 1 190 213 157 40.0 1e-38 MFKADIVNRMEACGAMAIVRTESIERGKEIARGCLQGGVDVMEISYTLPNAGDVIAALNH EFGKTMLVGAGTILDAETCRMAILAGAKFVIAPNFSREVARMCNRYQIPYAPGCTTITEM LEALEVGASYIKAFPISNFYGPQLAKIIQTPIPEMPLMASGGASLDNLEEWLENGISCVG FGGLLTNGTQAEIANNAAEIRRIIDIYRK >gi|312954455|gb|AENW01000053.1| GENE 173 180937 - 181824 781 295 aa, chain - ## HITS:1 COG:SMb20140 KEGG:ns NR:ns ## COG: SMb20140 COG0329 # Protein_GI_number: 16263888 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Sinorhizobium meliloti # 1 286 1 287 293 186 35.0 4e-47 MTVKGLITAMVTPMRNGSIDEEAVRGLVERLIQKGVNGIFILGTNGEFHVLSREEKVKLA AMVVEYADCRVPVYAGSGGNSTQEVIELSQALQQTGITALSVITPFLVPLSQQELLQHYE AVADAVNIPIILYNIPKNTGNNIEPQTAAALACHDNIVGIKDSSGNIEQIKQYIELTREM EFAVLSGSDSLILKALKLGAKGAVAATSNLLTDIDVAIIRYFEQGKLAEAQMMQEKIEPL RKVLKLGSIPSVLKATMNMAGIAAGECRKPIIMPNEAVLAEIREMLQYYVQEGEM >gi|312954455|gb|AENW01000053.1| GENE 174 181821 - 182402 631 193 aa, chain - ## HITS:1 COG:RSc0413_1 KEGG:ns NR:ns ## COG: RSc0413_1 COG0794 # Protein_GI_number: 17545132 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Ralstonia solanacearum # 36 186 55 205 216 106 41.0 3e-23 MRLAEAQLHEAVKAYDMKQLEMAGNLIQEAEQKGCRIHVTGIGKPAHLAGYSASLLSSTG TPAYFLDGTEAVHGSAGQVAEQDVVIVISNSGNTAELKQTVTTLKQNRAVIIAVCGNTDS WLYANSDAQLYAHVEQEGDRLNKPPRASILVELLVLQSLSVLLQYRKNITGKDYLKWHPG GSLGERTRREEQQ >gi|312954455|gb|AENW01000053.1| GENE 175 182445 - 183308 614 287 aa, chain - ## HITS:1 COG:BS_yitT KEGG:ns NR:ns ## COG: BS_yitT COG1284 # Protein_GI_number: 16078176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 284 1 279 280 141 29.0 2e-33 MTKETVKDILQVLLGSVLFAISLNIFLIPVQVYSAGFMGIAQLLRDFITVCSGMQFPFDI AGIINFLLNILIFLFAFHYVSRRFAVMTLLTIAVQSLMLSLIPVQRELLLQDPLVAVIVG SVLCAIGTVMIFNGKGSGGGIDVIGIYLSQSNKGSVGSIYMLVNTSVYLLCLLFYDFQTA VYSMIHSTLLSFAVDRIHKRNIEVELMIFTENSALLRQRLLAYSERGITCWNGFGAYTKA EKEILLSVVTRDQMQNMVKLIQTTDPEAFVIVSSQIQVYGNFRKQIV >gi|312954455|gb|AENW01000053.1| GENE 176 183289 - 184452 1048 387 aa, chain - ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 9 383 9 376 386 233 34.0 6e-61 MKVLPYRTYAEVNLQQLKENTRKVRALLSKDTKLLAVLKADGYGHGAVRIAKAIEDMSDW FAVASFYEARELRDQGITTPILVFGFLDDSNIEEAAQKNITCSALSYSYALHIAELCEQK KLRLSMHIKLDTGFHRLGIACEEERITEAYKEVRTLYELPQLQITGIYTHFSTAGSKALQ DEAFLARQYQLFCDMLHRLEEDHIDPGIRHCCNSKATLTNPEMHLDMVRVGLYLYGLGSD ADIEYLKLEPIVNWKARIYAIRDVKQGEGIGYGRTFITPQPMRIAVVSLGFADGYSRCLY ASDQVYVLVHGKRTRILGKICMDVMMVDITDIPDVRVNDTITVLGSEGTQRISANLLGRE TGGTAVEVTCGMGKRVQRVYVHDEGNC >gi|312954455|gb|AENW01000053.1| GENE 177 184554 - 185396 843 280 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 3 280 10 286 286 158 34.0 9e-39 MEEIRNEVKQEKRITNKDLMKVWWRWVFFQEASVSYERLQAPGFFYAISPVLVKLYGDNP EELTAACKRHMQFYNSEPYCGLAIHGITLALEEERANGAPISDEAINSLKTGLMGPLAGL GDSVRAGTIAPIVTAFCISIGQTGNLIAPFLLEGILVAIVWPFAIWLLKKSYHTGKEGIQ EIFSSGKLNWITTMTSTLGGITLGALAASYVTLSSPLEFVLGKGSKIALQADVLDVILKN ILPLSMVLLSVYLLNKKVSAVKIILILAAVCALGVLIGIF >gi|312954455|gb|AENW01000053.1| GENE 178 185399 - 186160 873 253 aa, chain - ## HITS:1 COG:SP2162 KEGG:ns NR:ns ## COG: SP2162 COG3715 # Protein_GI_number: 15901972 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 33 249 27 241 257 115 33.0 6e-26 MHINVIQAILIGFLYFLCQSGTPWLTAFMGNYVRQPLVNGAIVGLIMGDPVQGLIIGSAI NLPFIGVIMVGSTMPTDSALAGIVGTALALASGASPEVAVSMAVPIGLLGNLLWTVHMTK NCIFVHMMDKAAETGDVKRMNFLHVWPPQITTAFLMTIPVALVVYFGADVAKTAIDSLSG MPLHMLEVIGGVLPAVGIGMTLRMLMSKKSVILFFLLGFLMVTYQGFSMIVVALFAIIIA YFYTDLSSKRTGE >gi|312954455|gb|AENW01000053.1| GENE 179 186232 - 186705 597 157 aa, chain - ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 4 157 6 160 162 92 31.0 4e-19 MKQIVFARIDDRLIHGQVMTAWLKQCDANEVVIIDNELCKDTFVVMMMKSLIPSTISLKV FNDTDAAAYLKEDGKGEKILILVKTPQVILTLLNNGVKLEYLNVGGMGMKAGRSKLYKNI AASDEEREVFRELRKMELMMKVQVVPTEKAEELGKYL >gi|312954455|gb|AENW01000053.1| GENE 180 186754 - 187224 590 156 aa, chain - ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 156 1 158 161 97 34.0 9e-21 MSNILLARIDDRLIHGQVMTSWVRFVKSKNILIIDDETYHDTFIRSFITMVVPRGIQIQV LDTKAGIAYLRDYDGAGLVLLAKYPQTFYLLLEGGIELHEIIIGGMGARENRKVLYKNIC ASDEELEVLKKLYHSGISVKIQIVPEEKGIPLDTLL >gi|312954455|gb|AENW01000053.1| GENE 181 187238 - 187675 531 145 aa, chain - ## HITS:1 COG:CAP0066_1 KEGG:ns NR:ns ## COG: CAP0066_1 COG2893 # Protein_GI_number: 15004770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 135 1 133 157 78 32.0 5e-15 MVGFLIATHGGFARGILDSIELIAGKQERIDTISILHETSIDVFGKELTDKIVELDDGDG VVVFCDLLLASPYNQATMSYRALQGKHEYRIMSGANLPMILEALSGRMQDLGLDAISRMA QNAGKEGIQEFFEEFAKVSNTDMIQ >gi|312954455|gb|AENW01000053.1| GENE 182 188068 - 188376 446 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916294|ref|ZP_02078501.1| ## NR: gi|160916294|ref|ZP_02078501.1| hypothetical protein EUBDOL_02322 [Eubacterium dolichum DSM 3991] # 1 96 1 96 102 76 45.0 5e-13 MNETVKKEQLRSYAEGILKPETVESIMYVESFADEAGDSEVWLLESDTGNEYWLIEGAYP ANIIRKSGIYQSAERAFAAYVEMLQEAHEAEELPDRFHQNIR >gi|312954455|gb|AENW01000053.1| GENE 183 188423 - 189625 1234 400 aa, chain - ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 13 399 4 388 393 287 38.0 2e-77 MTESKRLQEAGMQIDTWIKKEQESLIALRRWFHMHPEPSMKEYETAAKIEEELTRIGVAH RRIRETGVFASISGEKGSGKVLVLRADMDALSMEDLLDKSYRSVNFGYAHACGHDAHTAV LLHAVKLLQERRHEFAGEIRFFFQPGEEIGQGARTFIGEGCLDGADRIFGAHMCSSLDVG TISLTPGPINASCDYFRIVVQGKGAHVSTPQKGVDALYIASQIVINLQSIVSRSLSPLDT AVVGIGTLHAGTQYNIVAKEALLEGTTRSFSSRTRAYINQRVCEIAHQTASLYGGSAQVE FRDFAAPLINDNQVVEELTPVAQAVVGKDRVIHNQEKMMQADDFADYLAHVPGCYAFIGS RNSQSCHTGMPHHHAQFDIDEDAMLLSLAVFVGYALQYLA >gi|312954455|gb|AENW01000053.1| GENE 184 189964 - 190083 59 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKQLRTYPKPYIYTLYSPYAPHEALLFYKRDRRKQHSR >gi|312954455|gb|AENW01000053.1| GENE 185 190119 - 192095 1548 658 aa, chain + ## HITS:1 COG:sll0798 KEGG:ns NR:ns ## COG: sll0798 COG0642 # Protein_GI_number: 16331898 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Synechocystis # 436 647 229 446 454 99 31.0 2e-20 MIVLIILSSSFFLSFINRYDNKYYNVQAPVKNGQLLSNQLRLEDNALYSLVDNWLFYPHI YRNATANQDARGVYTYLGQYPDFSMRYAARSPYGVSSYQLSIPATESGQTISIYFPEIDI ASEIWLDDTLVASNGNVKTAPIKARIQNTVITFSTEKTHTLYVIAANDTHYYSGMYYPCI LSTPQGIQSMILRKVLFYGFLVFSSLSIGLYSLNLWIRNRRDSVSRCFATATLAFSLFAS RELLRMSGISHVTIFYAFMDAAYFLMMYKILEINTLLSPLSKKNLITRGMRLLSIGMCIL PFANLFMLGKNADALLAYGWIVDGFKYISVLYILYTTLYGSRYRRMELWLLGANTFYIFG ILYTLLGVNLFEPLCYGWPNDYFSFFIVLSLAALMIQRSEQMARENERLTIHLQETVEQR TEQLHTLLSERKAMLAEFAHDLKAPLSSMQSFIELIRMQDTLIDDEVDGYLKILERKGAE LQNRMTVLQKFSSMDKGSQDKHVLDLTQFLKQFHDFNKADCDAAGIYFLYLSAREPCPVF ADEKQLTRSLENLLYNALSFTEMEGTITLSLSTEDCNAHIVVEDTGCGIAPDRQEQIFHK GVSLREDSTERGLGLYITKSIIAEHNGSIWVESDGEHGSAFHILLPLAYSNLQESVKP >gi|312954455|gb|AENW01000053.1| GENE 186 192184 - 192810 502 208 aa, chain + ## HITS:1 COG:no KEGG:EUBELI_00847 NR:ns ## KEGG: EUBELI_00847 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 32 198 63 228 251 79 29.0 1e-13 MKWYEKQKKLYTQNQEEQKNTPFGDRASIRGNDAVDHAALSAAVQESLKSQNEQLQTGKN DEAESFKSKETTVIQEHTTLQGDMNTEDNITIHGVFIGNISCGGDLTISGSVKGNISCKN AVIQQAKIEGDIVCDTHLEISQGSCVHGNVNAKQILCGGQIIGDTRIEGKSQFLASSAIS GDIQTQCLEVECGAVLQGNLQVQASCSA >gi|312954455|gb|AENW01000053.1| GENE 187 193095 - 193787 692 230 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 223 1 228 230 149 35.0 4e-36 MSKILIIDDDKDVLIAAEQYLQKNNEDVFTATGGSKGLRVLKQETIDCIVLDVLLKGESG FDLCRKIRSFSSVPIVFLTNLSSQEDLKNGFLMGADDYITKPFSLEELYLRIQARIRQYY QIPSRQKILNFFPLRINLDARTIQIQDNRVPLTMSEFDILVLLAQTPEHVYTISEIYQRV WKMPDMNSTHTVQVHIANLRKKLEEAWGDHMFIQTVWGKGYKFVEPPVSG >gi|312954455|gb|AENW01000053.1| GENE 188 193882 - 194598 861 238 aa, chain - ## HITS:1 COG:PAB0058 KEGG:ns NR:ns ## COG: PAB0058 COG2159 # Protein_GI_number: 14520316 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Pyrococcus abyssi # 2 234 15 242 248 226 47.0 3e-59 MKKIDAHAHIGEIGGWANVAATPQQLLELMDMYEIEKTVICSQNNEAVYRAISEWPDRFA GAVYVNPLKENCTQLLKQYLEKGFQAVKLNPLRHAFVADDVCVDPVMEMAEHYQVPVCIH CGHPPYSLPWSIALLAERFPNVKVMMIHMGHGHGVYIDASLKMARRYANLYLEMSGMPMH TKIKEAYESVGADRILFGTDGPFHHPSVEMQKVIVSGLDEEALQKVFYDNAKAFFRIS >gi|312954455|gb|AENW01000053.1| GENE 189 194595 - 195107 492 170 aa, chain - ## HITS:1 COG:PH1832 KEGG:ns NR:ns ## COG: PH1832 COG4720 # Protein_GI_number: 14591582 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 7 165 42 202 202 68 35.0 6e-12 MQHEKTKELAMTALMTALIFTATYIIKIPNPATGGYTHMGDCMIFLGVMVLGRKHGALAG GLGGALSDLLSGAAVWVLPTFFIKYAMGWIMGLLLEKSRLKNRLIAAGTGGVFQIIAYTL VKIPLTGVVPAIASVARICMQTVIGLVLFTVLSAMLSRTEMLSFFEEKRI >gi|312954455|gb|AENW01000053.1| GENE 190 195503 - 196066 492 187 aa, chain - ## HITS:1 COG:RSp1495 KEGG:ns NR:ns ## COG: RSp1495 COG0431 # Protein_GI_number: 17549714 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Ralstonia solanacearum # 1 146 1 144 184 120 41.0 1e-27 MKKIKIAAVVGSLRKASLNRQLAEAAAALCGDELVFEILDYQDLPFMNEDIEFPAPAAVQ RLRAQLQEADGIWFFSPEYNHGISGVLKNFLDWMSRPDEAQKRVLNGKPAAVSGITPGMS GTLIAQDQLVTLLSFLNMRVMNVPRLTIPNALEQVTDGKLVLKESEPFLAEQCRAFINFI ENNESFK >gi|312954455|gb|AENW01000053.1| GENE 191 196251 - 197156 1077 301 aa, chain + ## HITS:1 COG:CAC3494 KEGG:ns NR:ns ## COG: CAC3494 COG2378 # Protein_GI_number: 15896731 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 300 1 299 300 246 39.0 3e-65 MQIQRMFEIVYILLQKRRVTAKELAEHFEVSTRTIYRDLDALSMAGIPLYTNKGHQGGIF LMEDYVLHRSMFSEEEQQKLMAALQSYHIADPQDVDSLLTKLSSTFSAKLTNWIDVDFVD WGSDHSANRKFLLLKDAILDKQRIQFSYHSSYGASSTRTVEPLQLLFKGSAWYLIGYCTE KQAQRYFKLNRMENLHNTKEHFERELDTSSLPHDQNEYKKDLIHLVLEMKENVAYRIFDE YDSSCFRRREDGSFLVTIDFPKSEWIYGYLMSFGDSLRILEPVDIRDEVINRMRHAVKQY E >gi|312954455|gb|AENW01000053.1| GENE 192 197215 - 197880 822 221 aa, chain + ## HITS:1 COG:lin2189 KEGG:ns NR:ns ## COG: lin2189 COG4832 # Protein_GI_number: 16801254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 218 5 207 208 192 47.0 3e-49 MEKNIKLDYKKKYKDLYQPKITGMLIDIAAIPFLMVDGKGNPNEEDGDYSKAMQLLYGIT FTIKMSRKGTKALEGYHDYVVPPLEGLWEMKGIKGMDYSRKEDFLWTSMLRLPEYVTEDV FAWACEEFHKKHPEADINRVRMEWYEEGLCAQILHKGSYDEEPASLKKLHTFIEENGCCV DIGSTAASGQLRKHHEIYLGDPRKCKPENLKTVLRIPVRKQ >gi|312954455|gb|AENW01000053.1| GENE 193 197911 - 198684 673 257 aa, chain + ## HITS:1 COG:no KEGG:Dhaf_0028 NR:ns ## KEGG: Dhaf_0028 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 245 1 246 271 256 51.0 5e-67 MEYIQLTQENLQKEHICCSMTEKKGDHSVTDKKAWLKERMEEGLVFYKADVRGKVFIEYI PAQAAWFPIQTDNWMHINCLWVSGSFKGCGYSDELLEHCIADAKAKGMHGLTILSGKKKL PYLSDPSYLKYKGFIPADEAGEYVLMHLPFHAGGEKPRFADGVLRPQHPENTFVLYYTDQ CPFASQYALKFAEWMNSWGQACVVHHITTREAAQSCPGPVSGYALFYGNTYLTNEIQSEK KAEKLWKTYGSKTVQAG >gi|312954455|gb|AENW01000053.1| GENE 194 198656 - 200029 1265 457 aa, chain + ## HITS:1 COG:CAC3492 KEGG:ns NR:ns ## COG: CAC3492 COG1533 # Protein_GI_number: 15896729 # Func_class: L Replication, recombination and repair # Function: DNA repair photolyase # Organism: Clostridium acetobutylicum # 189 434 16 263 290 202 43.0 2e-51 MEARLCRLDDIFLVGCETKLGTYLSRNAGISMAFWKRFNEQLKMYHVKQGKQFVKYALTR RGSQGLTYACAVPSAQLYPDHFQIYRIPKGEYLCVEHHGDMAKLPETIDRIFKQELKDRQ LTPAKGALVYFEKYDERFHYRQDASVIELYIPLAGNACKSMEEIEAKTILQGGGNTIGQF SWFGMDFNMNLYKGCNHGCIYCDSRSSCYQVQEFDRVRKKKNELLILERQLKGKRKKGVI GIGAMSDTYNPFEKQQEITRGALQLIDRYGYGVGIDTKSTLVLRDLDLLARIASHNPVII KLTITCADDALGKMIEPYAPSSSERFLALEELHRAGIYAGILMMPILPFINDTPENITGI VELAAKHHAKFIYPAFGMTLRDNQRDYYYYQLDHYFPGKRRLYEQRYHNVYSCDSPHAAK LYKLFQTECRKYGIRYRMNDIIRGYKKQQVQQGQLKL >gi|312954455|gb|AENW01000053.1| GENE 195 200162 - 200752 514 196 aa, chain + ## HITS:1 COG:no KEGG:mru_0156 NR:ns ## KEGG: mru_0156 # Name: not_defined # Def: hypothetical protein # Organism: M.ruminantium # Pathway: not_defined # 3 189 9 214 216 137 39.0 2e-31 MKRPELSRALTPEQFQENYYLKEELQAFLKACGVTAAGSKADLNERILQILHGNAICSAV KQRKVKNNRTDTLCPDSIIEKDLVCSQKHRAFFKSMIGGKFFFHVEFQDWLKTHAGQTYQ DAVDAWYAIQEQKKHKKTVISPQFEYNTYIRAFFADNPGRSLKEAIMCWNHRKAIPGPHV YQKEDLLVLNEQEDER >gi|312954455|gb|AENW01000053.1| GENE 196 201053 - 201724 467 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 222 2 216 245 184 44 4e-45 MSIQIRNLYKSFHDNQVLRNVDLDVKEREIVVLMGLSGSGKTTLLRCLCDLETADSGEIL INDSYLLKEENGRSVYADKETKKALRKEVGMVFQNYQLFPHRNVLQNLIEAPVYHKLMSK EDAVQKAEKLLERLQISDKLHAYPSTLSGGQKQRVAIARACMLQPSVLCFDEPTSALDVE SIASVTSIIKDLSKEMAILIITHDEVFAQRVGTRVVKITDINR >gi|312954455|gb|AENW01000053.1| GENE 197 201735 - 202376 887 213 aa, chain - ## HITS:1 COG:lin1851 KEGG:ns NR:ns ## COG: lin1851 COG0765 # Protein_GI_number: 16800918 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 1 213 1 213 213 166 46.0 4e-41 MDFFIQLLPAFVEGLKITLFFWVVTLVGSFVLALPMVYVRLSRNAVVSTIVRFYIYIMRG TPLLLQLMFVYFGLPYLGIRLDRTTAAILAFLLNYTAYFTEILRGGIQSIDEGQKEAAKL LGYSNSYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDELLRYAKIAAGTYAT GLPFIYVGVIYLVLNMPISRGLNYLEKRLNYYK >gi|312954455|gb|AENW01000053.1| GENE 198 202380 - 203150 887 256 aa, chain - ## HITS:1 COG:lin1849 KEGG:ns NR:ns ## COG: lin1849 COG0834 # Protein_GI_number: 16800916 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 1 255 1 263 271 194 42.0 1e-49 MKRIALTMLALLCTLTLTACGSDAAKGDDKEVLTIGIDDTFAPMGFKKDGKLVGFDVELA EAVSKKIGKKVEFQNIDWDLKETELESGNIDLIWNGYSITEERKKQVLFSDPYMENRQII ITTDKTGIKTKADIKDKTLSVQKNSSAYDAVMKDKDFVAGLKDGKPTQFDTNNDCFMDLE SGRSDAIVVDETLARYYMKQQDNGVNYVVLDENFGKEEYAIGMRKDDTELCKHINKAMQE LKDDGTFDNIKDTWFK >gi|312954455|gb|AENW01000053.1| GENE 199 203590 - 205185 1623 531 aa, chain - ## HITS:1 COG:MA0761 KEGG:ns NR:ns ## COG: MA0761 COG1574 # Protein_GI_number: 20089646 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Methanosarcina acetivorans str.C2A # 17 526 33 553 553 291 32.0 2e-78 MIQILNARILTMKDRQTASCMCIEHGSIVYIGDHIPEEYKAADCVDMGGRVIIPGIIDAH SHLVSCANTFRQADLSNARSFADIQHILTDFIQQHHLKEQDWVSGVGYDHTLLKERRHPD ADVLKAVGRRPIVITHASSHMGVASYTAMQLANIPPDAPNPVGGRYGRNTDGMLNGYMEE NAFTSFLHHVPMPSIEEMMRLLEDALQLYASYGITTIQDGMMNAAVYAILKEAAARNILK QDVVGYVGIRDSEALRKESKPKGVQYHKHFRIGGYKMFLDGSPQGRTAWMQTPYQGDANY YGYGTMSDEEVAACIRKSLLEHQQLLAHCNGDAAAEQYLTQFEKIVRELDAKDTLRPVMI HAQLVQKEQLERMKPLQMIPSFFAAHVWHWGDVHIENFGVQRASLISPLRDALQLGLVFT LHTDTPVIAPNLMESVWCAAVRRTKNGVLLGEKERIDVYEALRAITQYAAWQYHEEDQKG TLEAGKLADFAVLDQNPLEIPVEEIRNIQVLETWKEGTCMYKRQVQESQNI >gi|312954455|gb|AENW01000053.1| GENE 200 205481 - 205705 160 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914625|ref|ZP_02076839.1| ## NR: gi|160914625|ref|ZP_02076839.1| hypothetical protein EUBDOL_00632 [Eubacterium dolichum DSM 3991] # 8 74 118 186 329 70 50.0 3e-11 MNFIFIVLLPVYQIIFLNSYAEHTRKWIDAYQMRNEEGEMESKRSLMRRIYIPEINAIVK RKGFGKLNDFEQLC >gi|312954455|gb|AENW01000053.1| GENE 201 205774 - 206004 177 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVISKGHQVETYRKFHDAEYLRSIGMATQIQEQREKNAILDSFEDGVEQGIKQGVEQG IKQGVEQGKKKVKDCF >gi|312954455|gb|AENW01000053.1| GENE 202 206931 - 208379 1449 482 aa, chain + ## HITS:1 COG:RSc2881 KEGG:ns NR:ns ## COG: RSc2881 COG0147 # Protein_GI_number: 17547600 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Ralstonia solanacearum # 16 475 14 497 509 335 41.0 1e-91 MIYPDLQTVRIYADTYTRIPVYTALDYEADDMLDLYAALRGPYSFFLESGVLNSYGRYSI IALPCRKRLISRGGTTALIQYDETIQLDGNPLDILKKEMQECAPIYPELPVFTGGAIGHF NYDMIRLFEAIQDTRLPSLKLPLMQFAFVEELLVLDHEQHRLYVIVNMQTQNGCPDNAYD KAVQRIYELQAFLSHRKPYSGKPLARRTVTSSMNKQQFMANVEQAQKHIQEGDIFQVVLS QRMEASYTEDPLDAYVQLRSLGKSPYMYYLDFDEYVIAGVSPELLLKGRGRSIMTMPIAG TRPRGADEQEDLKAARSLLEDPKENAEHSMLVDLGRNDIGRVSDIGSVQVRHMKQVQRYS HVMHMTSEVHGRLKESCDIYDALASVLPAGTLSGAPKISAMNIIEQLEPVKREIYGGAIG FLGYNKQFDACITIRTFIFHNHKVYLQAGAGIVKDSVPEKEYEETLHKAKAMLRAVHGEV TV >gi|312954455|gb|AENW01000053.1| GENE 203 208376 - 208954 421 192 aa, chain + ## HITS:1 COG:CAC3162 KEGG:ns NR:ns ## COG: CAC3162 COG0512 # Protein_GI_number: 15896410 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Clostridium acetobutylicum # 1 184 1 185 195 174 45.0 1e-43 MIVIIDNYDSFTYNLYQAVAVYAQDVIVLRNDAVDASMLQKLKPTALVFSPGAGHPHAAG NMESIIQQCYRDIPMLGICLGHQAIAEVFSSRITYARVIRHGECDAITQTAPCALFDGLS TTFLAARYHSLVVEQPGEELIVTAESSTKEIMAIQHHRYPVYGIQFHPESILTPDGMRII ENFITKARSYVC >gi|312954455|gb|AENW01000053.1| GENE 204 208948 - 209967 1343 339 aa, chain + ## HITS:1 COG:MJ0234 KEGG:ns NR:ns ## COG: MJ0234 COG0547 # Protein_GI_number: 15668409 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Methanococcus jannaschii # 1 336 1 335 336 298 45.0 1e-80 MLKEYIKKVSEHHDLTTEEMKTAMNIIMDGRASSEQVSAFLIAMKMKKESPAEIAAASRV MVSKATPLPTDVKGIVDIVGTGGDCLNTFNISTTSSFVLCGAGLAVAKHGNRGVSSKSGS ADTLEALHVNITLPPKEAAYLLEKVGITFLFAQTYHESMRHVGPIRRQLGLKTMFNILGP LTNPAHPDTYVIGAYNEEMADVMIHVYQEMGVKQAVVVHGDCGMDEVSMTGDTLVHELKD NQIRTYTISPEQFGRKRCQLQELVGGDSVENAKILMDILQGEHSAKRDAVLLNSGLALYI SGRADTMEDGIRLAEQSIDSGQALAKFRMFQQLSQEVGA >gi|312954455|gb|AENW01000053.1| GENE 205 209964 - 210731 893 255 aa, chain + ## HITS:1 COG:XF0213 KEGG:ns NR:ns ## COG: XF0213 COG0134 # Protein_GI_number: 15836818 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Xylella fastidiosa 9a5c # 41 245 56 260 264 183 48.0 2e-46 MILDTIIEKKKTTLEEELMRMLPREQGKIAKQMKLYDSLFVIGEIKKASPSKGVIVEDFS AARFANAYDEAGINAISILTERNFFQGGLENIEIARSVSDLPILRKDFIMDAREVVQTKR IGANMMLLIVAMLDDATLREFYQLARFLDLECIVEVHNEKELERALQLQPEIIGINNRDL HTFAVSLETTKRLASRIPADISIVSESGIFTHEDMEYVRKAGADAVLIGESFMRCPDIRT HLQELKYGSCKAVRY >gi|312954455|gb|AENW01000053.1| GENE 206 210703 - 211308 580 201 aa, chain + ## HITS:1 COG:CAC3159 KEGG:ns NR:ns ## COG: CAC3159 COG0135 # Protein_GI_number: 15896407 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Clostridium acetobutylicum # 1 200 1 202 205 134 39.0 8e-32 MAVVKLCGIKSEEDAALMNEVKPDYVGFVFAPGKHQISAASACRLSNIIRYSRLVGVFVN EQPAVIAKIAKQTGLDVIQLHGDESDADIRQLKESCNCEIWKALRIGQIEDMDAAAFPHA DRLLVDSYVQGLRGGSGKRIAMDLLQKLDVSRLIIAGGICRDNVKEILALQPYGIDVSSA LETNGKKDKEKVRTFMKQLKG >gi|312954455|gb|AENW01000053.1| GENE 207 211400 - 212584 1344 394 aa, chain + ## HITS:1 COG:CAC3158 KEGG:ns NR:ns ## COG: CAC3158 COG0133 # Protein_GI_number: 15896406 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Clostridium acetobutylicum # 4 389 3 388 394 521 63.0 1e-148 MTKGMYGAFGGQYAPETLMIALEELENAYEQVKDDADFQQELQFYLREYANRPSLLYYAR KMSEELGGAKIYLKREDLNHTGAHKINNVLGQALLAKRMGKTKIIAETGAGQHGVASATA AALFGMECEVFMGVEDMRRQSLNVFKMELLGATVTGVSSGTGTLKDACNEAMRAWASRCD DTFYVLGSAVGPHPYPMIVRDFQKIISEEMKAQCLEKEGRLPDAVIACVGGGSNAIGTFY DFLKDEDVALIGCEAAGKGIHTEQHAATIARGSVGVLHGMKSLFLQDDDGQIMPVYSISA GLDYPGIGPEHADLAQSGRVQYVPVTDDEAVAAFLYLTKTEGIIPAIESSHALAYAMKLA PTMSRDSILAVTLSGRGDKDVKSIAEYLEVDIHE >gi|312954455|gb|AENW01000053.1| GENE 208 212577 - 213371 465 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 263 1 261 263 183 39 6e-45 MNRIDAVFKRLKQEQKTAFIGFLTAGDPDIPTCMECVKQLEQNGCDIIEIGIPFSDPIAE GPVIQEASLRALQNDITTETVMRMVSNIREFSQIPLVFLLYYNQIFKYGANRFLRESEAA GIDALIIPDLPMEHREELKPLADAHHIQLISLVTPVSSVRKKSIAEQSEGFLYCVTSLGV TGERTEFQADLKAFLNELSAYSDTPKALGFGISTPQQITEMKSYADGVIVGSAIVRQIGR LAKQEITLEEIGSFVKTLADAAHA >gi|312954455|gb|AENW01000053.1| GENE 209 213795 - 215252 1031 485 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914267|ref|ZP_02076488.1| ## NR: gi|160914267|ref|ZP_02076488.1| hypothetical protein EUBDOL_00277 [Eubacterium dolichum DSM 3991] # 1 482 1 478 483 451 48.0 1e-125 MELLKKYATRKYLMYGSIAGGILAVIMLIIYLTAGQGLDSLSGLSSALSSLRSLCVLYYI DFVILVILVGGYAFRIGYLKDASFMGKLLLGCNGAALLMGLFCFSAIRAVHALASGDFTA AMAYSGSMDNKGIMLVIMVLAQIAAAGISIYILFVKRNEQVEAEEAMKDLSEGAKAAGEA VSKASAAAQDHALKLSEKCKAYYKSEKGRRNTIIGGIAAAVVIVCIAGFSIYQSVKKTPI DLTSACTVTFEGVSGEGTADINCNPDYDHTNEDIRMFMSDVTYKVEKDGELKNGDDAVLK AEYSQVTADSCKVKVENPEKKVKVEGLEIVYKTFAEIPKASSDKFEAAAKAALEAYIKDR STSFFSSTKVTVEHVALIGVYYEYRSYDHTGTAHYVYRTKVTEDSKYSTEKNTDYYDVKI TGISSAKETDLSEESDMINVDSIYLYEDEKTDAMALEKFKQYKTNLETIKEQAEKTVFKD ERKSK >gi|312954455|gb|AENW01000053.1| GENE 210 215436 - 216029 483 197 aa, chain + ## HITS:1 COG:no KEGG:BHWA1_02346 NR:ns ## KEGG: BHWA1_02346 # Name: not_defined # Def: transcriptional regulator, TetR family protein # Organism: B.hyodysenteriae # Pathway: not_defined # 1 185 1 184 185 103 30.0 3e-21 MNKVVTSKEELLDTARQIVFQEGIDQLSIRVLAKKLNISVGAVYNYFPSKSDLLLAIVES FWKGIFHKDICILSETLPFADFYEVVYHRLAEHMEDFFSVLLGQLDILRNTEKERGKLME ERYQQHIREGFLYALQQDCDIPEHIWNATFTKAAFIDFLMEHMMNDLSHQRRSCTFTKEL ICRLLQVTHGTTTHGPK >gi|312954455|gb|AENW01000053.1| GENE 211 216058 - 216726 508 222 aa, chain + ## HITS:1 COG:no KEGG:Clos_0666 NR:ns ## KEGG: Clos_0666 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 221 1 222 225 252 61.0 6e-66 MQAVMETAFDILYLCTVCILGITMIRKARGNRMLFLFGIMAVTLGLGDAFHLIPRAYALC TDGLAAHTAALGIGKFITSITMTIFYLLLFRIWELRYNRHRPLLRTGMYLLALLRMALCV FPQNAWTSPNAPLSWGILRNVPFALMGLWIIVLFYQQAKQKEDFDFKYMWLAITLSFLFY IPVVLWADTLPMIGMLMIPKTLAYVWVVWMGYQMMKKELNYL >gi|312954455|gb|AENW01000053.1| GENE 212 216723 - 217136 465 137 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0946 NR:ns ## KEGG: HMPREF0424_0946 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 135 5 138 147 104 46.0 1e-21 MKKTINLAFLYAILAMIGGVFYREFTKLSGFDGRTALSFVHTHLFLLGMVMFLIVTFCIK LFAIQESKKYRAFIIVYNIGVLLTSLMLAVRGVLQVNGSTLTSAANGMISGFAGIGHILV GIGMILLFLMLKEKVKE >gi|312954455|gb|AENW01000053.1| GENE 213 217136 - 217561 362 141 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0945 NR:ns ## KEGG: HMPREF0424_0945 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 133 1 134 146 115 50.0 6e-25 MHVAKKYLLLTAGIVWAAAGFNIVRIGWLSTSYMSIATAAAAVITFLIFYHMIFKKLIHK HTERILANTEDRMHILRFFDAKSYIIMICMMSFGIALRASHLWPDVCIKSFYTGLGCALL AAGIGFIRQYVKTSTFRLHAN >gi|312954455|gb|AENW01000053.1| GENE 214 217700 - 218362 719 220 aa, chain - ## HITS:1 COG:no KEGG:CLH_1918 NR:ns ## KEGG: CLH_1918 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 2 220 334 558 558 129 36.0 1e-28 MKQDFDILSSGGMIEKTIKPELTYRELDDTDNLYSFLLFTGYLKAISKTDTNTYQLMIPN KEIQYIYTTIFEEWFKQQIRSYQASFLEALLQEHVEEANEILNTVLFQSMSYFDYDEKYY HGFLNGMLQGKGSYRIVSNQESGFGRCDLAVLPAYNKNRGLLLELKVAKREEDVEKSAEL AIQQIKEKQYIEGLHRKGYTDILGYGIAFYKKTCVIKKME >gi|312954455|gb|AENW01000053.1| GENE 215 218561 - 218845 154 94 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2865 NR:ns ## KEGG: EUBREC_2865 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 94 193 286 576 104 52.0 1e-21 MQSAYLHGYYDQMVEFLRNVFSAALKTNDALEKGVLTGCLRIAKESIFTGLNNFNVYSVF DKQSSSDFGFTPEEVMCLLNDYELRKFERTVKEW >gi|312954455|gb|AENW01000053.1| GENE 216 218875 - 219114 145 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQTTFEKQLEMYSVFIRDIIRRNQELLESEQINAIDKELLTAYYMGTKNEVSQQTALKF LCECLQQHYHQNVILLIDE >gi|312954455|gb|AENW01000053.1| GENE 217 219185 - 219400 256 71 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1822 NR:ns ## KEGG: Lebu_1822 # Name: not_defined # Def: protein of unknown function DUF1703 # Organism: L.buccalis # Pathway: not_defined # 2 63 3 66 565 80 67.0 2e-14 MKRLPIGIEDFKELIEKEYYYVDKTMFIKNVLEEKVVLYTRPRRFGKTLNMSTLYYFFSI KQKKTPISLTA >gi|312954455|gb|AENW01000053.1| GENE 218 219531 - 219977 246 148 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHYVLCFFVVHQQFNMPGFYLFIQDLIIIGFSEEYLYRGVMYSIMKKENTALAIVLSSLF RGITHAVYPTVVVGGDLSVFLTDCISNIGFGLFIGYGFIYVFEESKTLWIPILLHAVYDY SMGYGWIIFVGTVMYLYIVNKGGHTRQK >gi|312954455|gb|AENW01000053.1| GENE 219 220274 - 221164 1005 296 aa, chain - ## HITS:1 COG:CAC2730 KEGG:ns NR:ns ## COG: CAC2730 COG0642 # Protein_GI_number: 15895987 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 5 294 4 301 303 145 32.0 9e-35 MLEIIVLVLGLLCLFLLLLLFLQHKNVRCIREQLTYTNREHSTFRFYSASMDPQMKALCE EMQKLREYYMQESVKAMRMDHNFKHLITNISHDIRTPLTSISGYLQMLETAEGEEERQHC FQVIRARMTYLQDLLEELFLYTRLSSASIEFHPEPIRIHDMLSEVLLHYYKDFKQQELQV QLEVDPMTMLTGDPVYLKRMLHNLCVNVLRHGFGTFVISAKRTDNTCELVFENDLVDDVD TKAIFERFYTKDNGGSGRDTGLGLAIVKELCEGMQGTVFAQKEAHRLAIHTIFPLA >gi|312954455|gb|AENW01000053.1| GENE 220 221182 - 221568 427 128 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVVENLWQQDSFASFSILQFICYSLMQMLILTVIASFLNMLIHATGSKVLAILVSVGYG SMTVFMLHAGIMSLLKVEYTDYILYAISGQLPYSWDAVFYSRAAMVAITSAILYNIGSYV LLRKKDLK >gi|312954455|gb|AENW01000053.1| GENE 221 221584 - 221934 370 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295098957|emb|CBK88046.1| ## NR: gi|295098957|emb|CBK88046.1| hypothetical protein [Eubacterium cylindroides T2-87] # 1 116 1 117 251 64 35.0 2e-09 MWNNLKMDLYRMVRQKSFYISMTVMLLLYLWLTTAVGLQNNTPFATFHQGKDTLVDFLYY FPKSSFYQIAVLIFLSLFFCEEYASGFVKNIYPMMHRKELLLLERFVFSFITAFIY >gi|312954455|gb|AENW01000053.1| GENE 222 221924 - 222841 249 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 302 9 307 309 100 28 7e-20 MKEWIVETNDLTKKFHNFTAVDQVSFHMKKGSITGLIGPNGAGKSTLMKLMSGLLHETQG ELKLFGKHPGEDPFVFRRVGTLIEHAGLYPALNAYDNLKMKALMLGCCSHELITELLKLC SLSTTGKKKAGDFSMGMKQRLGIAMALLGDPELLILDEPTNGLDPQGICDMRDLLKRLQE ERGMSILISSHMLAELDKVATDFVVIRSGKIIEQFTKEELLERCRDCFQLRVDDVKKASV ILEETCFVQTYEVLPKGILRLYDHYEDPSHIARQLVLHDVALYGMEDHHQDLEAYFLKEG EEHVE >gi|312954455|gb|AENW01000053.1| GENE 223 222933 - 223601 843 222 aa, chain - ## HITS:1 COG:CAC0860 KEGG:ns NR:ns ## COG: CAC0860 COG0745 # Protein_GI_number: 15894147 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 221 6 230 231 176 45.0 4e-44 MSEEHILIVEDDETIHNMIDEYLEKDYICVDAYSGTEARLILQHTEVSLVLLDLMLPGVS GEQLLRELKQKQLPVIVLSAKDGIDDRVALLNEGADDYLCKPFDLKELKARIQVQLRKRM SKQEHAIAVDGVVLLPDFCHLEIQGMKIRLTRHEYRILELLMRDVKRARTKKEIYEYAWE DDYLGDDKTINVHISNIRSKLHAVSKQEYIETIWGIGFKWKD >gi|312954455|gb|AENW01000053.1| GENE 224 223594 - 224397 642 267 aa, chain - ## HITS:1 COG:DR0470 KEGG:ns NR:ns ## COG: DR0470 COG1387 # Protein_GI_number: 15805497 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Deinococcus radiodurans # 7 232 8 230 260 72 26.0 8e-13 MRKTNYHMHTRRCMHASGRDEEYVISAIKNGYEEIGFSDHSPWNYDSDFVANMRMPLSKF DDYYASVSSLKEKYKNRISIKIGLECEYFPKYIDWLKQFLIDKKLDYIIFGNHYFKTDEE RVYFGTACEEEAWLIAYVDEAIAGMKTNLYSYLCHPDLFMRGRRVFDEVAKRESIRLCQA AKELHIPLEYNLAGAAYNDIMHTMQYPHIDFWKTAAEVGNTAIIGVDAHEPAALETDSYR EEGIALLSGLGMKITDTLPLKDFTSYE >gi|312954455|gb|AENW01000053.1| GENE 225 224652 - 224807 59 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRPDDIAGRIGGEEFCIYLNGIQNEAQLQHVIDTLLGVFAPSACHRCRKR >gi|312954455|gb|AENW01000053.1| GENE 226 225003 - 225947 1132 314 aa, chain - ## HITS:1 COG:CAC1591 KEGG:ns NR:ns ## COG: CAC1591 COG3689 # Protein_GI_number: 15894869 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 192 313 115 239 245 61 30.0 2e-09 MTVPVYLFTGFLESGKTTLIKETLLDTGFNTGERTLLLACEEGMEDYDDDFLTKTNTALV TVDNEAAMSYEFLKKCDSLIEPDRVMIEFNGTWNLNSFMDVEYPFDWLLVQILSTVDAST FEVYLNNMRSLIYDQLLHSETIIFNRCDETTKKLYLRNNIKAINKGAQLIYETRDGQIVE LGDDEMPFDLHADVIRIADGDYGLWYMDALEHPRKYEGKSVELKGKVIATHVDGIPNAFV FGRYAMVCCADDTSLIGLLCHYEHASNLIPKDWVSITAQIAVEFDEEYQGDVPVLYVKQL TEVLPLDDELVYFN >gi|312954455|gb|AENW01000053.1| GENE 227 225957 - 227087 957 376 aa, chain - ## HITS:1 COG:FN0779 KEGG:ns NR:ns ## COG: FN0779 COG0523 # Protein_GI_number: 19704114 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Fusobacterium nucleatum # 3 209 2 203 294 143 34.0 7e-34 MTKIDIISGFLGAGKTTLIKKLIKDVLHKEKIVLIENEFGEIGIDGGFLEDAGIEIREMN SGCICCSLVGDFSEALKKVLAEYHPERIIIEPSGVGKLSDVIKAVQGVAEESEICMNSFT TVADAQKCRMYMKNFGEFFNNQIEYANTIILSRTQNLNEEKLQSVTHDIRGHNAHATMIT TPWDELNGEQILEAMEQKKSLEKELLEEADICPTCHQHHDHHHEHGEGCSHDHDHHHVHD EECSHDHDHHHEQGEECSHDHGHHHEHGESCSCGHHHDHHHHHADEVFTSWGMETVRTYG EEELRQILEKLSNSEEYGIILRAKGMLKTESKEWLYFDLVPEEYEIRKGQPTYTGRFCVI GSKLEEDKLKELFHAE >gi|312954455|gb|AENW01000053.1| GENE 228 227486 - 228898 723 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632256|ref|ZP_01787991.1| 50S ribosomal protein L27 [Haemophilus influenzae 3655] # 4 440 3 445 456 283 37 7e-75 MNFIQELLGNLNTFLYSNILIILLVAAGLYFSIRTGFVQFRMLGEGLRLLGEKAHHHDGV SSFQALMISTASRVGTGNIAGVATALAAGGAGSIFWMWVIALIGGASAFVESTLAQIYKE RDGDQFRGGPAYYIEKALHKRWLGILFAVLLIACFIFGFNGLQAYNVSSALEYYVTDIQT ASMLVGLVLAGATAAVIFGGVHRIGIISSTIVPIMAVLYILLGLYITIANISGLPAIFAQ IFQEAFDLQAIFGGFAGSCVMYGIKRGLFSNEAGMGSAPNAGATADVSHPVKQGLVQTIS VFIDTILICSTTAFMLLNFGIRDGLTGMPYVQTAVSAEVGTWGIHFITISIILFAFSSLI GNYCYAESNLKFIINDKKALLVFRLLTVAVIFFGAQADFSTIWDLADVLMGFMAIENILV ILLLGNVAFLALKDYTKQKKQGKDPLFEPQKLKIRHAECWEGIDEEYKES >gi|312954455|gb|AENW01000053.1| GENE 229 229134 - 229736 520 200 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160916291|ref|ZP_02078498.1| ## NR: gi|160916291|ref|ZP_02078498.1| hypothetical protein EUBDOL_02319 [Eubacterium dolichum DSM 3991] # 1 200 25 221 221 114 36.0 5e-24 MKYPVLRTRFLPNLYKHCKKVQVLHVSYEDRGFLSQDEQRGIWLQDTREKLYEQIEGNFT TCQATRIFSFHKETFIIFKDNLTKKLLIEFLENLLTEISYYCEDQVQFRYQLLTAVLFQD GCEPRMTMANKLGRDIEDSDEIKQSTVLLKPGRPPRGKYFKSWKDYEKQMNERKAVHSPI EKPQPQKEAPVDTGDYMYYI >gi|312954455|gb|AENW01000053.1| GENE 230 229870 - 231087 1055 405 aa, chain + ## HITS:1 COG:L188881 KEGG:ns NR:ns ## COG: L188881 COG4767 # Protein_GI_number: 15673730 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Lactococcus lactis # 1 234 1 230 354 185 45.0 1e-46 MSVYLIPLQSALLLFPFLAAMITLPYIIIQYRKYGSILPIRVLIVYSFIFYLLCAYFLVL LPLPPMEEVASYTKPIMQLIPFASLKEFTMNSSLIWNDPATYLTALNEPSLYLIIFNILL TVPFGVYLRYYFQCSWKKTLLFTFLLTLSFECLQLSALFGYYPRPYRLFDVDDLITNTLG GMLGYAITPVFAHFLVSRSRMDEKAYDRGRSVSPLRRALAFFFDNLIILLTTAIITALIL LLRDEFLLTSPAIRICLLYLAVVFLYLFILPILMHGRTLGKAAVKIKLVTLDGHPPRWYQ YLLHFMILYGLILPAPFYIFHCVLAFLTQSAAAHWMYGGAVLILAVLYMVTMYQCILSLF DKDAIPWYDRFLPIKNQSGIQGLKKEVTGSDTASNTEDDTSTATS >gi|312954455|gb|AENW01000053.1| GENE 231 231538 - 233460 2070 640 aa, chain - ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 3 487 2 478 505 187 27.0 5e-47 MKDNISTLLDYLWHHYESWISAAELSQLLHVSTRQIRKYISILNEEHVEEPLVISTNKGY KLSSTEQYLRYRESGKHNLETPQTRQNLIIQKLISSKNGIDIFDLAQELYVSESTVDNDI RSIRKMISAYQIGIRKEKDVLFIDGSEKEKRQLMSRLITSDSYDNFVLKDEVRLLTYHYH FWDFRKNLSDIFSRNNLFANDYTLNNTALHLIVMIDRIRSSCILHEQVDLTPFFETPQYT VAREIREYIEEAYAIQINDAELYNLTLIIMNNTTMIDYSFINGSNISSFIEQRYIDIAHT VIHNVEECYLLDPFDEEFIAKFTIHVKNLFNRVEHNYYAKNPLTAKIKSTYPLIYDIAVY IAQQFKDMYDIILNEDEIAFISFHIGSYFENNVQSKNKLTVLFLYADYYSLHQNTLEKIS RRFEDKVTIKYAMSIHSYQPSLLHADLIISTVETPFPQPSIIIHPFLIEKDMNQLENTIT KMLAEKNKNKLKEFLFDLFDPRLFYTNMNMDRTRLIQTLCNDAIRLDYADASFTTDVFAR EHMSSTAFEDAAVPHSLASNAKKSFISVVLCPQGMEWGTHEVHIVTLLGVHDDSRKLFAQ IFDHLIEILSEPSFLNELVTCQDYDSFIQKLTHYMDAVDV >gi|312954455|gb|AENW01000053.1| GENE 232 233813 - 234121 463 102 aa, chain + ## HITS:1 COG:lin0914 KEGG:ns NR:ns ## COG: lin0914 COG1440 # Protein_GI_number: 16799986 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 97 1 97 101 86 53.0 1e-17 MKNILLVCGTGASSGFMAKNIRQAAKARNIEIGVKARSDSVVEDYIEDIDLLLVGPHLSY MLQDLEDIAEPHGVAVQIIPKDAYGELDGDAVLDFALPFLED >gi|312954455|gb|AENW01000053.1| GENE 233 234183 - 234911 908 242 aa, chain + ## HITS:1 COG:lin0915 KEGG:ns NR:ns ## COG: lin0915 COG1455 # Protein_GI_number: 16799987 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 3 89 4 90 91 102 54.0 6e-22 MKKFMDWMTNKFAPKMNKLARNPWIASVQEAILTAMPMIFIGSFTTILTAFGGLIDGFPD FSPLSTFSLGLLSLYLAYLVPYLLMEKKRHNKTKKEAGLAGIGFFLMLVGPTFDEAGNIL FQSSTLGNGGMIAALMAGLFVGFVMNAFSTHSFFKEDSAIPDFITVWFDTLIPILIILFV GWLFIFQLHINIFDCIYTLFSPILSAGDSFLGFVVLYFFGYTFLYTFGISTWVIYPIESA LI >gi|312954455|gb|AENW01000053.1| GENE 234 235038 - 235199 74 53 aa, chain + ## HITS:1 COG:no KEGG:Pjdr2_5109 NR:ns ## KEGG: Pjdr2_5109 # Name: not_defined # Def: phosphotransferase system EIIC # Organism: Paenibacillus # Pathway: Phosphotransferase system (PTS) [PATH:pjd02060] # 1 46 286 331 415 69 69.0 3e-11 MLFMAKSKKCKVIGKASLVPNLCNINEPLVFGAPIAFNPILMVPMWSDCLPLH >gi|312954455|gb|AENW01000053.1| GENE 235 235172 - 235468 265 98 aa, chain + ## HITS:1 COG:no KEGG:LEUM_0940 NR:ns ## KEGG: LEUM_0940 # Name: not_defined # Def: phosphotransferase system cellobiose-specific component IIC # Organism: L.mesenteroides # Pathway: Phosphotransferase system (PTS) [PATH:lme02060] # 3 80 333 410 411 74 43.0 1e-12 MVGLLAPALTWLALYFDILPKITTLFSFWYLPGPICSYAVGGMIGLLFTFFIFVLSWIIY YPFFKVYDRQCMQKEEEDEKKKDQLAKRKAMRERTEEA >gi|312954455|gb|AENW01000053.1| GENE 236 235483 - 235812 306 109 aa, chain + ## HITS:1 COG:lin0917 KEGG:ns NR:ns ## COG: lin0917 COG1447 # Protein_GI_number: 16799988 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 7 107 11 110 116 60 40.0 1e-09 MKKTTIEQLNSAAMQIILHAGDCRNLLNEAVNALLEDKSEEDIKAKITAAKKEITKAHVI QTEMIQSSINEDELQTTLLFTHAQDTLMTINSEVNLTQNMIRLYRKLEK >gi|312954455|gb|AENW01000053.1| GENE 237 235814 - 237244 1598 476 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 8 476 7 481 483 492 49.0 1e-139 MWKTATGFPKGFLWGGAIAANQAEGAWNIDGKGPSMADIEILPEHYDRKHVVGFTHTAQQ IKEALQDKDGYYPRRHGIDFYHTYKEDLALMKEMGFSCFRTSFNWTRIFPNGDEDLPNEE GLKYYDALLDEMLKNGIEPVMTVSHYEMPVHLITKYKGWYAPEMIDFFVRFCEVLFKRYH KKVKYWILLNQINSLGGWGEFASLGMVEDGYENWESTKYQATHHQFVACAKATKLAHEID AGMQIGMMLGDDALYPATCRPEDVFANTQRMQMSIYFYSDVLLRGEYPGYALRYFKDHQI QIHAKEEELKLLKEHPADFLSFSYYFTRIVDASQPQPKENPYLETSIWGWATDPLGFRNS LNQYWDRYHVPIFIAENGLGAIDTVIDGHIHDEYRIAYLREHIKAMREAILDGVQVFGYA SWGPIDIVSCSQGEMSKRYGYIYVDRDDRGNGSNARIRKDSFTWYQHVIQTNGEEL >gi|312954455|gb|AENW01000053.1| GENE 238 237327 - 238778 1069 483 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 8 483 7 481 483 531 53.0 1e-150 MKQLKKGFPADFLWGGAIAANQAEGAFLEGGRGWSVADILKVQDKGDLKKKSNKETSMKD IEAALQDTKGYYPKRYGIDFYHTYKEDLKLLAGTGMNSFRTSISWSRIFPNGDETTPNEE GLRFYDNLIDEIIKNGMEPLITLSHYEMPLHLATAYNGWNHRKTIDFFVKYADTVMRRYK DKVKYWIVVNQINLIHHESFNHLGIPSDRVSNLMEAKYQGIHNECTASAIVTKIGHEINP DFQIGMMVYDGLSEPLTCKPEDVFANMQRNQREYFFSDLLLRGEYPGYMLRYFQEHDIRL DIREEDERMLKENPADFLAISYYYTCASSSESNSCADVNDDGAVSNPYIEASEWGWGIDP LGLRTVLNYYYDRYQKPIIIAENGFGTFDEISSDGCIHDERRIAYLREHIRNMKEAIMDG VEFIGYYPWGPIDIISCSSSEMSKRYGFIYFDQDDYGNGTKRRLKKDSYDWYRSVIDSNG ENL >gi|312954455|gb|AENW01000053.1| GENE 239 238992 - 239234 168 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRNKIKKQTPEKNTPFVEKEELENLIKEMMTDKEVEDLLKEGFTREQIAYVANEKKKCDE QGRFIGKIIDILTWIFPDFK >gi|312954455|gb|AENW01000053.1| GENE 240 239231 - 239734 210 167 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKIAAIIVSLCLCVGVLGDVNYTVSSKEIPEKYIVETGSYSQNQKEQLENTNYVFSEKE LKDTPFEGQKVEVIKGELYVNGRIIWTIKIWILSKGIPILIGWMAAGGVVKQATNKIIKA ELINKVKFAWNKYSNMTDAYADEQQNLQSVKLSNGNQCVLAPSGNYK >gi|312954455|gb|AENW01000053.1| GENE 241 240650 - 241018 195 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|167756421|ref|ZP_02428548.1| ## NR: gi|167756421|ref|ZP_02428548.1| hypothetical protein CLORAM_01954 [Clostridium ramosum DSM 1402] # 1 116 7 123 124 88 41.0 2e-16 MAYCGLACCVCSESDCPGCHARGCEHKDMCGILACCLRKGMDGCYVCDEFPCDEDMLKKR RVRVFNQCLQKSGPAEIMRCLKRNEEARIRYHHTGQLIGDYDLESDRDIEELLMKGGVHS RG >gi|312954455|gb|AENW01000053.1| GENE 242 241104 - 242009 936 301 aa, chain - ## HITS:1 COG:lin0464 KEGG:ns NR:ns ## COG: lin0464 COG2378 # Protein_GI_number: 16799540 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 1 300 1 309 310 122 30.0 7e-28 MKADRLYGITLYLLNHKRASGRCLADTFEVSLRCIQRDMDTLSMAGVPIIAYSGVNGGYE LQEGYKLPAALVKEQDYAIIAASLDSMESAGLHKEVQTAKLLFPKHEEDTLGVQLDFSVA NETAIEQRRLLQSVIAARHSVTFQYTDAQGKQTKRFCEAVALIFRWYAWYLVGWDVDKQA YRMYKLVRMEQLQEAEHTNRKHPCLREILKQLDETDTQVIWTIKLHCQPEARGRVLEYFQ GTIMEVYADTSFLYCMQVPKQEHFWYASLLGMGNTVRVLEPEELVERIKADCRAMLKQYE K >gi|312954455|gb|AENW01000053.1| GENE 243 242011 - 242478 616 155 aa, chain - ## HITS:1 COG:BS_ywhH KEGG:ns NR:ns ## COG: BS_ywhH COG2606 # Protein_GI_number: 16080800 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 153 1 154 157 159 48.0 2e-39 MAMEQARAYLKQYHKEQDILVLDASSATVEQAAQALGTQPERIAKSLSFMVREHAVIVVA AGDCRVDNHAYKETFGCKAKMLKGDEVEAYTNHAIGGVCPFGVPANTRIYLDVSLKRFDF VYPACGTPNSAIRLTIAELETLLPQASWVDVCRVA >gi|312954455|gb|AENW01000053.1| GENE 244 242499 - 243005 564 168 aa, chain - ## HITS:1 COG:PH0075 KEGG:ns NR:ns ## COG: PH0075 COG2109 # Protein_GI_number: 14590029 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Pyrococcus horikoshii # 1 168 9 175 175 107 39.0 1e-23 MLHIYSGNGKGKTTAGFGLVLRQAGYERRVAVAQFLKDGTSGELRALQALSCVKVRATQM PQGFYFQMQEQEQLATRQGIQELFAWVKDRAKECTCIFLDEVLDAVQLGLLKEEELLHFL QEHWDLEIILTGRNPSQELLDICDYHTEMVEHRHPYQKGIAARKGVEY >gi|312954455|gb|AENW01000053.1| GENE 245 243198 - 244190 1319 330 aa, chain + ## HITS:1 COG:FN2081 KEGG:ns NR:ns ## COG: FN2081 COG2984 # Protein_GI_number: 19705371 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Fusobacterium nucleatum # 32 317 11 288 299 206 45.0 4e-53 MKKKLLGGLALALLLAGCGNSGDSDKEKTDDGKKTYKIGIIQQMEHPALDSAREGLEKYL KGKSDAKFEITVKNAQGDNGTADTIAKQFVSEDVDLIYSIATNASQAAVNATGGTDIPVV FNAVTDGVEAKLVTSNEKPGGNVTGVSDAAPLEKQLEMIRELLPEAKKIGMIYNIGEVNG KLQVKQVEKLASKYNFKIVKKGVSATTEIATAAEQLAGDVDCIYNITDNMVVSATASITD KANAKNIPVFAAEDGQMKAGLLASDSISYEKLGEQAGSVAYDILVNGKKAGDIPVETAKD TTLYINKKVAEQLGIKIPDSLAERATFVEE >gi|312954455|gb|AENW01000053.1| GENE 246 244209 - 245123 1357 304 aa, chain + ## HITS:1 COG:FN2080 KEGG:ns NR:ns ## COG: FN2080 COG4120 # Protein_GI_number: 19705370 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Fusobacterium nucleatum # 10 286 8 266 278 185 43.0 1e-46 MDFILDVTAQGLAYSILAIGVLLTYQVLDYADLTVEGSFPLGAAAGAMCVMHGINPFLSL IVAFIAGLAAGYATGFLHVKFGISSLLSGILVMTGLYSINLIVAGDMSNIPLFTYDTIFS YGALLGNSAGGALGTWIVKLWPIFILLVLVLFLKLLMDWFLDTKYGFLMRIAGDNPQLIA TLGKDIGHIKMNGLAISNGYAAVSGAVVSQFLKYFDITLGTGMIVMGLASVIMGLTLFKR FTFIGFTTSVILGAITYRLTIAAALKVGLPPSYLKLIMAVIFIAVLVLGNGVMGKFFHRK VQES >gi|312954455|gb|AENW01000053.1| GENE 247 245133 - 245933 223 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 218 245 90 27 7e-17 MLKLEHVKKTFNKGSANEVILYRDLNVEIHDGEFVTIIGSNGSGKSTFFNVISGNIRQDA GSVSFNGKDVSRLPEHKRSQFIGRVFQDPQKGTSPSLTILQNMAMAYHKGKSFGLTKGVD KALIPLFERELADMQLGLESKLHVSVGSLSGGQRQALSLLMATLITPQLLLLDEHTAALD PKTSDLIIQLTKKIVEEKKMTTIMITHNLKHAITYGDRLLMFHKGEIIMDIPKEEKKQLT VEKLIEKFNSLNMLDALDDELAFSAQ >gi|312954455|gb|AENW01000053.1| GENE 248 246132 - 246698 519 188 aa, chain - ## HITS:1 COG:mlr5237 KEGG:ns NR:ns ## COG: mlr5237 COG3506 # Protein_GI_number: 13474365 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 6 178 9 183 191 71 28.0 8e-13 MIFETMNDASYRQEDGAVILHASAKSDFVVSPITGKAHASAAFLYQRVKGDFVLQAKVSQ RFLSTYDAPALMAMESETRWVKACFEYTDLHTRAVVSVITDTTSDDCNGVETDSDSIWLQ LCRKDHIFAIHYSLDGVHWRMHRILRMEMEEELKVGLVAQSPLGDGGDFIFEKVSLKPER KADIRGGN >gi|312954455|gb|AENW01000053.1| GENE 249 246695 - 247603 960 302 aa, chain - ## HITS:1 COG:lin2846 KEGG:ns NR:ns ## COG: lin2846 COG1737 # Protein_GI_number: 16801906 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 3 279 5 276 283 161 34.0 1e-39 MCMHIRETLQNTRSWSVNEQALCDYILKNSIEVIHMNGTQLAQAAAVSTSCVYRFCHKLG FEGFSAFRIQLASELNEKLSSPSEVNYDYPFTEKESTAQLIQTLGSLYKTSIDETIRLLD ITQLETFAEHIYQARFTYILTTNTNLQAAENFARKMEEIGMHIHVAGELLQQRLYCASAK QGDVAIILSYAGISDHVQECAKQLYENKVTVLLLSSRHDKTLHYFATCRLYLCGFESSYQ KITTFSSHVSAQYLLDLVYSVIYQKNYEKNIEHRDRAYHVCRLKAKEESGMKRMETNKGE ET >gi|312954455|gb|AENW01000053.1| GENE 250 247796 - 248608 1059 270 aa, chain + ## HITS:1 COG:VC1364 KEGG:ns NR:ns ## COG: VC1364 COG0561 # Protein_GI_number: 15641376 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Vibrio cholerae # 1 261 1 263 273 115 28.0 1e-25 MYKLIVCSVDDTLLTNNHTLSEDTKEALLQAQQAGARLALISRRSPQNLKKIAEKLQMNT YKGYIAACHGAFLQEMGSERVLRKKEVSLKLVDRIKALAEGQDVTLSIVENGCLYASGID PYVQLEALLNDMRLCPWEAFEDISDTVLKLYVTGESSALNGFISWMPKTLEEEIKLIRSG RNMCSIVHGDVDKGTALQCIMQDMGIQKEDVLLIADSTNDKAMAPYAGCVSVMANAEDEV RRDAAFLTHSNECDGIVRTLEVLTQDVEVI >gi|312954455|gb|AENW01000053.1| GENE 251 248742 - 250574 1878 610 aa, chain + ## HITS:1 COG:TM1640 KEGG:ns NR:ns ## COG: TM1640 COG0493 # Protein_GI_number: 15644388 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Thermotoga maritima # 137 532 46 459 468 254 38.0 5e-67 MSRLTIMTATNAQRVIEDLYKDLERRIIASPPGLCPVDMASAFLKLCHAQTCGKCVPCRI GLAQLQMLLEDVLEGRAALSTIDLIEKTAQNISWSADCAIGQEAADMVLKGVQGFRDDYE EHILHGRCTASLNQPVPCVSMCPAGVDIPGYIALVKEGRNADAVRLIRKDNPFPAVCAYI CEHPCEARCRRNMLDDSINIRGIKRYAVDHAGYVPPEPCAKSTGKRIAIVGGGPGGLSAA YYLQRMGHQTVVYEKRKSLGGMLRYGIPNYRLPRARLDEEIEVIKAAGVEIHTGVDIGKD IAMCDLDKEFDAVYLAIGAQTDKKVGIPGEDGENVISAVTMLRKIGDDIMPDFKGKRVLV IGGGNVAMNVARSSKRLGAAYVGIAYRRRQEDMTALPQEVEGALAEGCELLPLQAPTRIE LDEEQKVAALWVQPQMISSYRKGRPSPKQADTEEKRIPCDIVVVAIGQGIESQHFAEEGV PIRHGAIDALDHSGVENMEGIFAGGDCVTGPATVIRAIAAGKVAAANIDEYLGYHHAIEC DVIIPAANYADRPKCGRIQLKERQTTIRNADFEPIEYGMSSEEAQQECGRCLRCDHYGFG VFKGGRTTKW >gi|312954455|gb|AENW01000053.1| GENE 252 250568 - 252301 1661 577 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 220 568 13 361 372 340 49.0 4e-93 MVTITIDHQQIAVDEQLTILEAAKEAHIEIPHLCYLRDINEIGACRVCVVELQGKDKLVT ACNTVVQEGMVIYTNSPKVRYARRCNVELLLSQHDCECAYCSRSGNCSLQKISNDLGITS LPYEKKVMYTPWNQSFPLIRESNKCIKCMRCIQICDKVQNLQVWDVQNTGSRTTVNVSLN RSIEEAECSLCGQCITHCPVNALHVREDSERAFAAFNDPDKITIVQIAPAVRAAWGESLG LRREEATIEKLGDAFRRMGADYVFDTDFAADLTIMEEASEFLERLHHNKEQEMPMFTSCC PGWVRFLKSQYPDMVSHLSTSKSPHQMFGAVTKTWFAEKLGVDPSSIYNISVMPCVAKKH EIDIPVMNDSGYRDVDVVLTTREVVRMIHAEHIDVGYLQDHPLDDPLGTASGAGVIFGAT GGVMEAALRSAYYFVTGENADADAFADVRGMDGWKESTFEIQGIPVRCAIVSGLGNTRRL IEAMRRKEVAYDFIEVMACPGGCSGGGGQPIHDGEELAAERADTLYHLDRNAKLRYSHEN PSIHALYDEYLGKPLSELAEKLLHTDHEAWQMPHTER >gi|312954455|gb|AENW01000053.1| GENE 253 252592 - 253764 833 390 aa, chain + ## HITS:1 COG:no KEGG:BF2854 NR:ns ## KEGG: BF2854 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis # Pathway: not_defined # 111 385 221 488 496 142 33.0 3e-32 MTEVLQKQAATLYKLPRFRTAFHNVILYSLRSNGYYDYRYISRSITRADVLAADTPASQL QYLTEISDQTLLHYTLKHAAVMEKRHLLLLELLRQAGYEKDIAVKDAVLYEKDAVQLVEI TSLPQYLETILQYRRAHISFYFRGHQNMNYKMTPSLFRSPETAEREDAIYKQTLIEYPMD FYNSRSHFEKLVKMQHYQICTRLLDLTTNPLVALFFACEDATRDTGQVLVFESREAPLFP DSDKVCMLSSLGFLKEDVRKALREEDAEAFSGSVSAAMLLHEIQRELPAFQPYIKQRDLR QVLLVQAAMDNIRIQRQNGLFFLCGNYASDDEELQSVLRNKLLHHEGKQMVFYIKKKEQL LEELKLVHMSHKDLYGNLQEAAWDIMHSAR >gi|312954455|gb|AENW01000053.1| GENE 254 253778 - 254575 818 265 aa, chain + ## HITS:1 COG:no KEGG:BCAH187_A3269 NR:ns ## KEGG: BCAH187_A3269 # Name: not_defined # Def: transcriptional regulator, MerR family # Organism: B.cereus_AH187 # Pathway: not_defined # 4 123 2 121 264 79 39.0 2e-13 METYKISQIAKLLGLSSDTIRFYEKKGLVHPSVNPDNQYREYDLDNILELLDIIYYRHLD ISLQDIQSICTSRSRENMYELLLKKKQETEEKIRYEQQLLKKLTCISETYQRVESNQNIC SIKAFPASVILFESEKTSDFFTQQIAHLTQDQFVFCSLFKTYHIDNCDIQPRKTIIALEQ DIMEELHMDYPQAQLIKAHKQPCVFLVIHMLHSQIHPEDIAPLLTYAAKQKLTLQNTLYL REIPLTSYQDDQNYYAELYIPICED >gi|312954455|gb|AENW01000053.1| GENE 255 254658 - 255998 1373 446 aa, chain + ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 1 419 7 427 448 189 30.0 1e-47 MKKDYIHKQFWNYVLPSMFTMLLSGFYAIVDGLFVGNAVGDTALGAINLAYPIQVILNAT AIGLGIGGSVVMSRSRGDGKEDKARHAMGSTLALLLVCGIILSVGLLALHPMLLRMLGAK GAMYAQARSYIIVVLMGGLLPVLGNGLNPLLRNYGKTFLATAIMSSGLITNIILDYLFVF RFHMGLAGAAWATITAQGVVAVLTLLYMYARELKSYSRKDIVPDVPLVQSIVRIGLSPFG QTMAPSLVIVLTNWMCLRYGGDAAVTIYSVVSYVLCSAQLLLQGIGDGVQPLISFYYGAK KEDKIHILYRKAFFVTIAVSLILCIAVVLFLNPLTALFGISDAIFEGAKTAILITTVSFP FLGITRVTSAIFYATEKTRNSTFLVYMEPCLLLPLSLFALSFLFQLNGIWMAYPAAQLIL CGIALFMKNPLHAPAALPQTQEQTLC >gi|312954455|gb|AENW01000053.1| GENE 256 256422 - 257153 532 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] # 1 243 1 243 245 209 43 1e-52 MKENKYDDDVFFNKYKEMNRSVQGLEGAGEWSQLKQLLPDFEGKRVLDLGCGYGWHCIYA AQQKAASVHGVDISKKMLAVAEEKSRDYAITYQCSAMEDLQFSKASFDVVISSLAFHYVK DFKQLAAAISTWLTPKGSFVFSVEHPVFTAYGTQDWYYAENGEILHFPVDNYYYEGKREA NFLGERVVKYHRTLTTYLDTLLCNGFELQHIIEPQPPEHMLDIEGMRDEMRRPMMLLIAA IKR >gi|312954455|gb|AENW01000053.1| GENE 257 257495 - 257695 338 66 aa, chain - ## HITS:1 COG:CAC0976 KEGG:ns NR:ns ## COG: CAC0976 COG2155 # Protein_GI_number: 15894263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 59 1 59 69 60 54.0 6e-10 MKVINYIVLIISIIGCVNWGLIGLFDFNLVDMLFGTGSILSRAVYILVGICGIYQLSFFS SLNNER >gi|312954455|gb|AENW01000053.1| GENE 258 257804 - 258814 1181 336 aa, chain + ## HITS:1 COG:BS_pta KEGG:ns NR:ns ## COG: BS_pta COG0280 # Protein_GI_number: 16080818 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Bacillus subtilis # 7 316 12 321 323 284 44.0 2e-76 MNIPLCVKDSSVRILFTEGRDRRMMEAAIRLYNEQILTPLLYGDTRQLYEQAEAYGLSLT GIQIVDPKRFTQREDMIRRMLELRKGKTDEQTCREWLKKDTYFCTMYVELGYADGLLGGS ANSTADTLRPIMQLIKTRMPHTIVSSCFLMSRRDEHYIFADCSLNRNPNTDELVEIALQA AESAKTFQLEPKVALLSYSTHGSGSGTDVDTVREAAQRLQRMPLDYDVDGELQVDCALSR RVAELKAVDSTVGGNANVLIFPDLNAGNIGYKLVANLGGFEALGPILQGVRLPMNDLSRS ATTEEIYKMAIITAMQKEAGNKMRRHGNADSIDLGI >gi|312954455|gb|AENW01000053.1| GENE 259 258786 - 259337 203 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229206079|ref|ZP_04332536.1| acetyltransferase, ribosomal protein N-acetylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] # 1 181 2 185 186 82 30 1e-14 MQTASIWEFKGYTMRSSRIEDKDAYYLAGFTECDSEVARMTGSKMHYSKEEVDAYFVNCL NDSTRYDFLIFDPQGSLIGESVINEIDEQARSANFRICIFKSKNCGKGIGSWAIQTTRDF AFCERKLHRLSLDVFSFNIRAKKAYEKAGFRVEGILRDAIWDNGVYADDILMSILEEEWK QIA >gi|312954455|gb|AENW01000053.1| GENE 260 259601 - 262225 2573 874 aa, chain - ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 4 869 11 886 893 723 45.0 0 MEAYQRTVEEALQEQHSSMHGLSEAQAQERSSVFGLNKLQEEKKASLLKRLARQLSNPMI IVLLGAALISGITSAYAHESYADTFIILFVVMVNAMLGLYQEGKAEAAIEALKHMNAPAC KVVRNGEIRVTASEDLVPGDVIVLEAGDAVPADGRILECASLKVEESALSGESLPVEKQT EALQEDNPPLGDRRNMVYMGSSVVYGRGRAVITATGMHTEMGKIADAILVSREEATPLQQ KLNRLSKLLSLLVLAICAFMFLFELLRHGDLRAESLLDTFMLAVSLAVAAIPEGLAAVVT VQLAIGVTRMAKRNAVIRQLTAVETLGCTQVICSDKTGTLTQNRMQVVEHFGDDERLLAL AMSLCNDTQVHADGTMQGEPTEVALSAYGETLFHINEEMQKYPRIHEFPFDSQRKMMTTM HRQSDGVVLQFTKGAMDVVLQRCTGIWRNQKIEPMREEDREELNRMNKRMADRALRVLCA ACKWNEHIETDMETAESGLVFLGLCGMMDPVREEVKPAIAQCRKAGIRPVMITGDHIDTA VAIAKSLTIITDTSQAMSGSTLDTLSQEELTARIDQTFVYARVKPEHKVRIVDAWKSRGY VVAMSGDGVNDAPAIKRANIGVGMGITGTDVTKNVADMVLADDNFATIVSAVQEGRRIYD NIRKAIQFLLSSNISEVLSIFLATMIGFTILKPVHILWVNLLTDTFPALALGMEEGDEDL MRRPPRPRSEGLFANGLHMQIIFQGCAITLITLFSYIVGHFMEAGVWEITQSADGMTMAF LTMSMTEMFHAFNMRSLKQSVVHMKKQNLYLIGSVVCALFLTIAVIYIPVLSELFAFEHI SVAEFAVALVMSVSIIPIVEIEKWIHRALQRKHG >gi|312954455|gb|AENW01000053.1| GENE 261 262442 - 263542 881 366 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSGKNIKKLRMEYEISVQRLAAYMRIEQEELLDWEAGIRVPDEEQLERLAQLFQVDSSEL IDAKERSVMKKQRESKSSDQKNKKQKAKKGKTRKKTKRKTKHRTDHKTKKQTVVKKRRTW PLALVLLLLVAGLAAGGGFLYWKYGDELFSQKQEYRMEDMAGTFTDENAHNGAASAIVLR SDGSFVFTQNSCEGMQDVSGTWSISDHSIKATSTQGTYTFAIRSSNQLKYEGQTIYCGPY NKDIFTRGGVNGQTPQQEEKPQKQEDIAGTYSGNHSTLVISDVTDTTFSYTLTSLNPEDA QQVATISGTAQRNGDTASFSFSDDGYGTQGNGSFTFQDAQVVFSIQKTQTDPQAVWGIFE EGTLFR >gi|312954455|gb|AENW01000053.1| GENE 262 263650 - 264450 657 266 aa, chain - ## HITS:1 COG:CAC3443_1 KEGG:ns NR:ns ## COG: CAC3443_1 COG0789 # Protein_GI_number: 15896684 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 6 97 10 101 118 67 35.0 3e-11 MQYKIGKIAKIMGVTPEAIRHYERLGLIVPFKDPETNYRYYTSEQIDQLLYIQRFSHMGI SLSNIRENILRGNVQTHREMVQQKRNDYVQEIQRLQQKLMNLDHYISVLKMTAYCLYNCI YIQRPGIFFISQEDCLNIKEDANDSIQFNLFQKNADMFFQCALISKEEDDDRKRICGFGI YEDCAAEIGVSEEFGFSYLPGCAVVIYAFEHNDKRSALTRERIRTFFQREHLIQKGPVFQ RLVYRTFEDHKDANLVEMLMIPYIYE >gi|312954455|gb|AENW01000053.1| GENE 263 265199 - 265315 153 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEEFRRIWSFIEKAEPAQEMLSVLVPGEEILQCYKTN >gi|312954455|gb|AENW01000053.1| GENE 264 265319 - 265567 214 82 aa, chain + ## HITS:1 COG:no KEGG:Ccel_3190 NR:ns ## KEGG: Ccel_3190 # Name: not_defined # Def: protein of unknown function DUF1696 # Organism: C.cellulolyticum # Pathway: not_defined # 6 81 47 122 123 110 63.0 1e-23 MSALMNKRIIIFDRQGLTGKKIEIYSIPYRSIDMWSTENAGKLFDIDAELELWTKAGHFK INVDKKCNIREFDTILGNAILD >gi|312954455|gb|AENW01000053.1| GENE 265 265725 - 266318 720 197 aa, chain - ## HITS:1 COG:CAC1338 KEGG:ns NR:ns ## COG: CAC1338 COG3546 # Protein_GI_number: 15894617 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Clostridium acetobutylicum # 1 185 1 185 200 247 64.0 1e-65 MWTYEKKLQFPVNIRKPDPAFAKIVISQIGGPDGELAASMRYLNQRYAMPYDSVRAMLTD IGTEELAHLEMVSAILYQLTRNLSVEEIKAGGFDAYYVDHTTGIWTQAASGAPFTAAYYQ SKGDPLTDLFEDMAAEQKARTTYENLIRAASDPDVIAPLRFLREREIVHFQRFGEALAYV QSQLDAENYYQCNPAFD >gi|312954455|gb|AENW01000053.1| GENE 266 266322 - 266567 134 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|223984791|ref|ZP_03634903.1| ## NR: gi|223984791|ref|ZP_03634903.1| hypothetical protein HOLDEFILI_02200 [Holdemania filiformis DSM 12042] # 1 80 1 80 81 86 51.0 6e-16 MNRKQLLRKLQMLDFAIQETALFLNSHPDDRQAMQYYQSAVKEREKVAKEYEHLCGPLTN RQNHSDSWEYSKGPWPWERED >gi|312954455|gb|AENW01000053.1| GENE 267 266570 - 266824 289 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKYANGACCPWIPRERETNDEYCYDDVDFMEQQPKHQRQQAQMPGMAYVPMQVWKKPYER EIGFQRGTIFHALDKPFLGDEGAC >gi|312954455|gb|AENW01000053.1| GENE 268 267050 - 269608 2482 852 aa, chain - ## HITS:1 COG:lin2460 KEGG:ns NR:ns ## COG: lin2460 COG1511 # Protein_GI_number: 16801522 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 807 4 874 927 446 33.0 1e-125 MKEEWKNIAGSTWIKVVLAAIIVIPMLYSGIFLGSMWDPYGNADKIPVAVVNEDNKVTYN GSSLHIGEDLVANLKKAKEMDFCFVDAAKASQGLKDGSYYMIITIPENFSSNATTLMDKH PKKMELRYTTNPGTNYIASKMDETAIAKIREQISATVTKTYADTLFSNVQVLSSGLKTAG KGSQKIQNGLSDSIAGNQTITDNLNTLASSTLTFQDGSETLKQGLQAYTDGVAQLQQGSR QLRSGIRTMNGKSVQLVNGASSLHTGSGELQQGVEAYTTGVAALQQGSEQLMQSSAVLDQ GVNALAQGTSDLHKGSSRVLSGMQELSTAIKSSTDSHADLLAYLHEKNTGSADSLKQVTQ GAAALEAQLQTIINKNTDASQRLNAAAQKLKDLHAYEDTVNQLTEAAADMNDLNQQYAVL KTGLSKLSKGSEEMTALLSGNDQALAQLQQGLSTVQRSLDAQGSTAEAMGLIQGMQQLQS GLADADKALSGEQGLASGIHAYTKGVDTIGNGLSTLSQKSTALTAGAAQLQTGTTQLNSA IPALQGGITQLLTGSDSLYQGASALNSSSPTLLNGSAQLQGGASQISSGAQQLAQGSNTL GGGLLQLKDGSHTLTSSLHKGAEESSVSATQNTKEMLAQPVVTTHQELSNVENNGTAMAP YMMSVGLYVACMAFTLMYPLLKNTSKTTSGLRMWACKASVMYTVSTLMAVIMIGVLMLVN GLSPYQTLLTFAMAALVSAGFMSMIVFFNITCGKIGSFIVLIFMVLQLGGAAGTYPIETS SGFYNAIHPFMPFSYSVHAFRNTLAIGGSITPDILVFAGMLVVFSVLSILFYRWKTSVSE EHFEKTLLAQFH >gi|312954455|gb|AENW01000053.1| GENE 269 269818 - 270234 511 138 aa, chain + ## HITS:1 COG:lin2461 KEGG:ns NR:ns ## COG: lin2461 COG1959 # Protein_GI_number: 16801523 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 1 126 1 130 156 63 30.0 1e-10 MRIRGSLEQAICIVLLISTSSRPVKSSELSKKLNVSDSYLKKIMRQLVKAKIVSSIASKN GGFVLLKTPSRITFLDLFNAIEGQEQFAVSTSLVDRVFDSRKQVKEKEEKIMHYLHGAEL EYRKKLKEITIQQILSDV >gi|312954455|gb|AENW01000053.1| GENE 270 270530 - 270682 246 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQKKKSCCDSEELLHGEEAKKTAGNNQWTNNNLKYYPDERDRQDGPGGN >gi|312954455|gb|AENW01000053.1| GENE 271 270726 - 271172 326 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169350724|ref|ZP_02867662.1| ## NR: gi|169350724|ref|ZP_02867662.1| hypothetical protein CLOSPI_01497 [Clostridium spiroforme DSM 1552] # 1 141 1 140 142 113 39.0 4e-24 MKLACIYINALHFRDTVSFYEQLLQQKGKEVTAQRWVEFSCGHTLAVLHAEYDAQCVQKE QDVDEHYNDAYVEDCIQTVNQGNDIMVQNYVCEDLQSEYTRLKNLQIGPLSPLYYVSISM PYWYFNITDPEGNVLEITGPYASGKESV >gi|312954455|gb|AENW01000053.1| GENE 272 271169 - 271453 291 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225018668|ref|ZP_03707860.1| ## NR: gi|225018668|ref|ZP_03707860.1| hypothetical protein CLOSTMETH_02618 [Clostridium methylpentosum DSM 5476] # 1 88 1 89 96 72 41.0 9e-12 MEISREDHRIFIEEQGQLPAEFTFPFVDKQVVDINHTFSDVSLRGQGIRGALMKEAAAVI RKKCWKCMAFSPYALAWMKKHEKEQDIWMKEEPR >gi|312954455|gb|AENW01000053.1| GENE 273 271800 - 273572 2258 590 aa, chain - ## HITS:1 COG:BH0640 KEGG:ns NR:ns ## COG: BH0640 COG1001 # Protein_GI_number: 15613203 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Bacillus halodurans # 12 580 9 569 585 351 38.0 2e-96 MKLQPKDKKQLLKAALGEIPSDLLIKHVQLVNVITGEIYPANVFVYDGMIAHVEYKNLDA DLDKAATVVDGQGHYLIPGFLDAHEHIESSMMTPRNFAKAVLPHGTTTVITDPHEIANVW GMEGVRYMHDSGEDLPMRQLIDIPSCVPAVPGLENAGADFLAEQIEELCGLKRVIGLAEV MDFLAVIHGEDRMMDILKVAEDRGLYMQGHAPYVSGRMLSAYLCGGPNTCHETRASDEGL EKLRSAMYVDARDSSITKNVKDIWEGVKQVKFFDHLCFCTDDREADDILNNGHMNDVVRN AIRCGMDPVTAIKSATYNTAREIKIENLGAIAPGFVADMLLVESLEELKPSHVFYNGELV AENGKLLADIKDESYAIEHRNSMHVKKLSVEDFRIQAPVENGTVKVNLMEYKDLLLSSTL VSCEELPVENGYLKLNDDDLKFVAVVNRHEGHDTVALGVVRGFGTTTGALASTVSHDSHN LTIVYDTAENALLAANELIACGGGMCAVKDGAVLHTLQLPLAGLISLKPAEELAVDNALM KDANRALGLVDMENPLLRIVTLALPVIPEAKMSDLGLIDVLKKEIVPLFV >gi|312954455|gb|AENW01000053.1| GENE 274 273622 - 275001 1486 459 aa, chain - ## HITS:1 COG:CAC2820 KEGG:ns NR:ns ## COG: CAC2820 COG2252 # Protein_GI_number: 15896075 # Func_class: R General function prediction only # Function: Permeases # Organism: Clostridium acetobutylicum # 23 458 6 428 429 319 48.0 8e-87 MDIMEYGEDMVKEENMSKIADFFKFRERNTSYKKELIAGITTFMTMAYVLVVQPGAIVGY GDAAFIIDANGVMITKEAIVVTCAIISGLITLLMALYANLPFALATGMGSNFMFGALIQS QQLSFGGAMAMTLISGVIFLLLTIFGIRDLIVKAIPKNIKISIGTAIGFFIAYLGFKNTG IAAFTESGMGMGNFTDPAVMLAVLGLVIIAILTAYKVNGAILIGIVIVTLLGIPAGVTTV PSTFAKVPDFTGLGNVMFNLDFKSVFSFSSVILIFTAFCGDFFSTLGTILGVSAKAGMLD ENGDLPNIQQPFLVDAIGTCVGALTGNTVITTFVESSAGVEAGGRTGFTSVVVSVIFMIM VFLSPLVLMIPNAATGPALIFVGFLMISGFKDIDFADFTESFGPFVMIMFTVFTGSIASG ISAGILAFVLIKTATGKFREVHPIMYVMAIPLICYFIYG >gi|312954455|gb|AENW01000053.1| GENE 275 275155 - 276375 1091 406 aa, chain - ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 1 404 5 411 414 271 37.0 2e-72 MRINEKRLWNHIQTLGQIGKAEDGSVTRLSFTKEDEAAAFQLTEWMREAGLHVTIDACGN IIGTLKGAEPNLPPVVCGSHFDTVKEGGIFDGCLGVLTGIEVLQTIREAGVQPQRSIMVI GFRDEEGNRFGYGMIGSRSICGKVEKDGLLSVDHKGITLAQAMTQAGYHPACYVTCQLSS LEAFYEVHIEQADVLAAQNLSVGIVEGIAGLVRYTVTIYGRSAHAGATPMHRRHDPVTAM SRWIMHMTQLAQQQPHTVATIGEIHTYPGACNIICDRVSFSLDLRSLDDAVIQQILDVMQ EFEGMLEQEQGVRIERRLEQQLPAAICDEGLKQELEVCCKTLQLPILRLASGAGHDCMNF QGICPTAMIFVRSQHEGASHCKEEYSTQKDCADGCQLLLEAFRKYL >gi|312954455|gb|AENW01000053.1| GENE 276 276471 - 276821 482 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQNDVMTDKFIDYVNDRIEDLDMTKSSLARSVGLDKNSVTKYLKKERTMPLHVALKIANY LNMDISRICGIQTEQVLMPIELNLMRELRSIRDETSQVRLTLDFISITKSFNSSHR >gi|312954455|gb|AENW01000053.1| GENE 277 277182 - 277694 719 170 aa, chain + ## HITS:1 COG:no KEGG:DSY1815 NR:ns ## KEGG: DSY1815 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 48 168 209 330 330 75 34.0 6e-13 MKKLLFVLLAGMLMLTGCGGGNDDKSGEAPKSNDESSTELSTKEVSAKLREINDWYVTDI WNVGLCDIGYYTSSGTSATGEELDIELTLKQYNEAIAKLEEYNTFVNGLKDKKYDDVKFA WEKLYKGIRESDKIVQSNEIKAKSGLDLKTDKLSQYQTAFQKYINALSES >gi|312954455|gb|AENW01000053.1| GENE 278 278094 - 278933 625 279 aa, chain - ## HITS:1 COG:BS_ydeE_1 KEGG:ns NR:ns ## COG: BS_ydeE_1 COG2207 # Protein_GI_number: 16077584 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 1 127 1 127 127 100 39.0 3e-21 MELITGINRVMAYTEQHLKEDLDCAKLAQLSGCSYADFQRVFSLLNHMSYLEYVKARRLS QAAVEIIHSRKRIMDIALEYGYESADVFAAAFRRAFGCSPSQARKQNLQLPLFLPRSFAI TVHGNTEMKYEIKRKAGMHLSGHSVISTQNENRSIKFWSDVKADGTLQRMMQEAATAVSY GLCFGYDKYGNNRYMIAVEGMLSEEYEAFALPAADWMKFQNTGPIAEGLPALWKTIYAEV LPASGYDRNESMPTVELYGEGSCEAKDYHMEIWIPIIRR >gi|312954455|gb|AENW01000053.1| GENE 279 279025 - 279528 317 167 aa, chain - ## HITS:1 COG:SP0950 KEGG:ns NR:ns ## COG: SP0950 COG0454 # Protein_GI_number: 15900828 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 3 156 2 157 166 90 31.0 1e-18 MKLTDFSDTFHVRRLCPEDVENIYALCKANKTYYKYFKTAPTHENIMEDLSRTPPGKTAD DKYFLGFFQKDQTLIAILDLIFDYPKPQVAYIGLFMLDVSEQGKGTGSNIMKGVFKQLAN QGITCVRLGCIHGNVEAASFWKHNGFYSLKEQLQAVDDQVDLMEKVL >gi|312954455|gb|AENW01000053.1| GENE 280 279617 - 280120 225 167 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_2020 NR:ns ## KEGG: Dhaf_2020 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 2 146 7 146 159 120 41.0 2e-26 MQLREFTESDLALAEAWLHKAHVRKWYEIPQLGVTLENWMMECKERNGKYQWITHLIVMW QEKPIGLCQYYKATDSEEDFGTLPRIGTYGIDYLIGEEDCIGKGLGKDMLKLLVNRIFSF PDAYRITADIDRENHASEKTLLSCGFTLQNPVKSRYILLKSEFIKTS >gi|312954455|gb|AENW01000053.1| GENE 281 280916 - 281371 586 151 aa, chain - ## HITS:1 COG:BH3552 KEGG:ns NR:ns ## COG: BH3552 COG0691 # Protein_GI_number: 15616114 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Bacillus halodurans # 5 150 10 155 157 140 50.0 9e-34 MAGRKIVVFNRKASHEYFLEERFEAGLVLQGTEIKSIRQGHVQIRDAYISFTNDEAYVKE MHILGYEFGNRFNHDETRIRKLLLHKEEIRKLQQKVKLKGYTVIPISVYLEKGMAKMEIA LAKGKDLHDKRNVQKEKDAKREIEKAMKNQY >gi|312954455|gb|AENW01000053.1| GENE 282 281386 - 282552 1353 388 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 23 349 68 397 430 157 33.0 2e-38 MKKFWIVLGCMLLVAGCSGESGKKETKQEKDAAPVVKSEEKDDIRDVSFVAVGDNLIHGA IFYYNAKGDGTYDFKDIYEHTNRYTRKADIAYINQETICGGTELGLSHYPSFNGPYEVLD AVADAGFDWMAASSNHTLDAGVQGILNQLAYMKEHHPDIRVTGSHATREESEQLQVITRE GVKFGILGYTYGLNGYVLPKGKEYMVDLIDKDKIKNDVEKLKKVSDVQIVSMHWGTEYSF EPNEEQKELAQFLSDLGVDVIIGEHPHVIQPMDYVTGKDGNQTLVIYSLGNFLSAQDDHE NMLGGMASWTLSYNRTNGEVSFKNVEFLPTVTHIEGNFSFFRTYTLKDYTNELAARHTLT TQYHQDNTREYYINLVNRVMNDKVKIVY >gi|312954455|gb|AENW01000053.1| GENE 283 282570 - 284702 1350 710 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 701 1 705 730 524 40 1e-147 MNKKEELLALIHGNGYRGMHAAQLSRALDMEDSASFTQLMKLLNDLEAEHILARDAKERY FTSEELGYVTGTLRINPKGFGFVETADTSYYIGRDHLGLGMDRDIVFAKTWTNNDKSVEG EVIEVLEHSVRQLVGTVKIKEGRKYFLSDAFLNYRKVRITNFDDFRLVNDSKVLLGIDSY GTVLKCHIEKEIGYKYDPGIDILSVLLEKDINPQFPEDVMQEVQQIPETIQEDDIAQRKD LRKLLTITIDGEDAKDLDDAISVEKLENNKGYRLYVHIADVSHYVRAGSAIDQEAYARGT SVYVVDRVVPMLPHALCNGICSLNPRVDRLTLTCCMDIDKKGEIDNYKIYPSIICSDERM TYKKVNAILAGDAQSQKEYPHLLNLCLNMKVLSGIIRRRRERLGAIDFDTREAKILVDEK GNPTDIVLRERGESERIIEDFMIAANECVAMHMKWMEVPSMYRIHEAPEPKKMRDFATTA KSLGYNFQGGIQNVYPAQLQSLLNEARGQENYFVLSSFMLRAMQKARYDNRCIGHFGLAL KNYLHFTSPIRRYPDLVVHRMLRRYIFTSSDDVERMKQDELWCEAAANQASERERNAVDA EREVDDMKKAQYMERFVGHMFDGVVSGITKFGMFVELENTVEGLVHVTSLTDDYYHYDEM TKSLIGEHTAKVYKMGQKVRVKCSGADRFKREVDFEVTEKKKRQRRKASR >gi|312954455|gb|AENW01000053.1| GENE 284 284776 - 285006 300 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916279|ref|ZP_02078486.1| ## NR: gi|160916279|ref|ZP_02078486.1| hypothetical protein EUBDOL_02306 [Eubacterium dolichum DSM 3991] # 1 75 22 96 97 95 80.0 9e-19 MGILDTLLMIAAVVLIILSLLQSGKSDGLGSAFGGSEGLNLFANVKERGSEKVMSNVTLV TGIVFFALVIIIRIVK >gi|312954455|gb|AENW01000053.1| GENE 285 285233 - 287068 1495 611 aa, chain - ## HITS:1 COG:CAP0027 KEGG:ns NR:ns ## COG: CAP0027 COG0531 # Protein_GI_number: 15004731 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Clostridium acetobutylicum # 1 609 1 609 615 459 46.0 1e-129 MLKKIKHLVLGQSLRSDALDHEKFSVIWGLPVLSSDAISSVSYACEEILMVLIPVLGMAS YGLLMKVGFAIVFLLFILVFSYRQTINCYPQGGGSYIVASDNLGKVFGLIAAASLAIDYV LTVAVSVCAGTAAITSAFPQLLSMRTGIALIIISLLTIGNLRGMKDSSVLFGIPTYLFII TILLLIVTGFVKVLIFHETPAVSAAMPQCVENAGLLLFLKAFSSGCTALTGVEAVSDGIP NFREPAQKNAKRVLYLLAGLVFVIFLGISALASLYHIIPNANVTVIAMIAEAVFGNGTLL FYLVQVTTAVILTMAANTAFADLPLLLSILARDGFVPRQFMSRGSRLSFSNGILLLFFLS AALVIYFHASSHLLMPLYAVGVFLSFTLSQAGMFVRWVKRKEDKWKHKAFINGAGMVITG ITCIIIAASKFLHGAWIVLICIPVLVYIMERIHRHYHYVKESLKIRSAEELQPYDLQIHG RVILPVDSINRSFLKAYHYACSLQVREMEFYHVNTNAEATEKLQELYQQMRLDIPLVIED APYRNVNEMILHHVEEAQNDLKKKESVTVILPQFVMKKKRFHALHNQTSMQLKLQLSKLR NVSVVSVPYII >gi|312954455|gb|AENW01000053.1| GENE 286 287565 - 288863 1646 432 aa, chain - ## HITS:1 COG:BS_eno KEGG:ns NR:ns ## COG: BS_eno COG0148 # Protein_GI_number: 16080443 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Bacillus subtilis # 1 431 1 430 430 567 68.0 1e-161 MSLITNVHAREILDSRGNPTIEVEVETASGFVGRAMVPSGASTGEREALELRDGDPSRYG GKGVLQAVENVNNILIDVVLGMDVTDQAAIDKALIDADGTKDKSKYGANAILGISLAVAH AAADYYGLPLYRYLGGINAKTLPVPMMNVLNGGSHADSSVDFQEFMIMPVGAKSIREAIR MGAETFHALKKVLKSKGQVTAVGDEGGFAPNLEDNEAPLKCIMEAIEAAGFRAGEDICIA MDVAASEFYNTETKMYDLKKSGQGSKTTDEMIAWYDELVEKYPIISIEDGLGERDWDGWK KLTEHLGKKIQIVGDDLFVTNPAILQEGIDKDIANSILIKVNQIGTLTETFDAMELAKKH GYTAVVSHRSGETEDATIADIAVAFNAGQIKTGSMSRTDRIAKYNQLLRIEEELGDVALF QGKSAFYNIYKH >gi|312954455|gb|AENW01000053.1| GENE 287 288967 - 289731 915 254 aa, chain - ## HITS:1 COG:FN0048 KEGG:ns NR:ns ## COG: FN0048 COG0647 # Protein_GI_number: 19703400 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 3 252 2 251 252 243 49.0 2e-64 MKKTYFIDLDGTMYRGSQIIEGAKEFIDTLTKRGERFVFLTNNAKRTKRQNVEHMEQMGF TGIREEHFFTSSMAAARYAAAHYEGRNVWYIGQDGLREALEDNGFTVTEQDVDLVFVGLD NTGTYEKYSKALDFLLKGAKLIGTNNDRLLAQPGGFAVGNGSIVAMFEYASGQVSPKIGK PHAPILEEALKYFQLNADEAVILGDNLETDILLGVENHVDTIFVTSGVHQREDVEKLQIH PTRTIDDLRELLAE >gi|312954455|gb|AENW01000053.1| GENE 288 289792 - 289983 348 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRERAGFIIGISGVVLLLKPNFDPDQMAMYFNYLVGNYWPAILIIIGLLLVNPKKKKTRG KSR >gi|312954455|gb|AENW01000053.1| GENE 289 290243 - 290794 748 183 aa, chain - ## HITS:1 COG:BS_nusG KEGG:ns NR:ns ## COG: BS_nusG COG0250 # Protein_GI_number: 16077169 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Bacillus subtilis # 6 181 2 177 177 192 51.0 3e-49 MAEENKKQWYVVNTYAGHENRVKENLLRRVESMGLQDYLFRVIVAEEKEIEYKNGKEVEK TTNLFSGYLFVEMIMTDEAWYIVRNTPGVTGFIGSSGGGAKPFPVAEEEMESILRRLGMS ERKVQIDFAVGDRVRILSGAFANVEGTVEELHEDSQTAVVLTILFGRETPTEIGYGELEK VEL >gi|312954455|gb|AENW01000053.1| GENE 290 290805 - 290984 245 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400420|ref|ZP_06644566.1| ## NR: gi|293400420|ref|ZP_06644566.1| preprotein translocase, SecE subunit [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 58 1 58 58 89 81.0 9e-17 MKWFSINGILTEMKRIRWPKAKDLARDSVTVFGFVAFLALFFYLCQVVSSGFLKLIGIV >gi|312954455|gb|AENW01000053.1| GENE 291 290996 - 291145 208 49 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|237734017|ref|ZP_04564498.1| 50S ribosomal protein L33 [Mollicutes bacterium D7] # 1 49 1 49 49 84 75 4e-15 MSDKVILTCTECLSRNYTTTKNKKTHNERIELMKFCKKCGKHTLHKETK >gi|312954455|gb|AENW01000053.1| GENE 292 291238 - 291822 634 194 aa, chain - ## HITS:1 COG:BH0115 KEGG:ns NR:ns ## COG: BH0115 COG1595 # Protein_GI_number: 15612678 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 8 190 19 208 217 58 25.0 5e-09 MEEVYENDYELLYLIRQKDEMAFAALMHKYEEIADKLIKKYIGACKSGLSEDDYLQLARL KLVQTIDDYREDQEASFYHYFCSVFHNLLIDCYRQSAHERRVLSLDSCIREDAGGYCLLD IMEKPNESFAVSYEFQHRVNTRKEALSDLEKRIVDLRALGYTYRQIADTLQVKVKKVDNT LQKVRKDREREEMR >gi|312954455|gb|AENW01000053.1| GENE 293 291855 - 292577 516 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 4 240 8 249 255 203 47 8e-51 MTQYVYGKNVVKQLLQDGKPIHEVLIQEGIRDTALEGEIKKRRIPVKVLGRKKMDQLLNG NHQGIAACIDDYKTWELEELLESVPQGKQPLLVMLDGLEDPHNLGAILRTCDCIRADGVI IGKHRNVRLTPTVAKVSTGAIDTVKVSVVTNLVQAIKYLKKQGYWVVGTDFENSRDYREG QYDVPLVLVIGSEGFGISSLVKKNCDYCVRLPMEGSVSSLNASVAAGILLYQIHAQRHPL >gi|312954455|gb|AENW01000053.1| GENE 294 292574 - 292963 252 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 1 118 7 124 141 101 44 3e-20 VMDIKEYNGTSLAYMGDAVMSLLVREMLLAQGWQKSKILQKKSESWVSAKAQAYFLIQLK ERAFFSEEEYAIVLRGRNTHSASKAKNADVTTYRMSTGLEALFGWLYLTHQEDRLKALWE EIQKIGEYQ >gi|312954455|gb|AENW01000053.1| GENE 295 292960 - 294297 1479 445 aa, chain - ## HITS:1 COG:BH0111 KEGG:ns NR:ns ## COG: BH0111 COG0215 # Protein_GI_number: 15612674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Bacillus halodurans # 1 445 3 452 466 417 48.0 1e-116 MKIFNSMNQKVEEFKPLHENEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGYNV KMVSNYTDVDDKIIKVAKECGVSEAEITEKFIDAYNHDRLSLHAAMPDAAPRVTETMDAI IAFIKLLVDKGHAYEMEGDVYFRVNSVESYGKLSNQQIEDLLVGARIDENSKKENPLDFT LWKKTEEGIKWDSPWSVGRPGWHTECVVMINQEFGGEHTIDIHGGGMDLKFPHHENEIAQ SRAAYDSPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIAKIGGNVLRWVMLSAHYRAP LNINEEAIETAKKELNRVATAMKQAYVKLGLADVDMDETCDEEQLAPFLDAMQDDMNTPN AFAAVFETVKALNQALRQREIDLQAVKALVRTLEKMMDVLGIELLRLTMSEEDKQLHRQW KAAVKEKDFETADQYRAKLIEKGIL >gi|312954455|gb|AENW01000053.1| GENE 296 294578 - 294766 350 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALRTKLNTNDEGETSGFKELDDLDAVYVDEMKKSGLSDDLMAQFMDISKALEKEKSEGN ER >gi|312954455|gb|AENW01000053.1| GENE 297 294835 - 295959 1104 374 aa, chain - ## HITS:1 COG:TM1588 KEGG:ns NR:ns ## COG: TM1588 COG2199 # Protein_GI_number: 15644336 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Thermotoga maritima # 199 373 54 228 240 83 29.0 6e-16 MDRKRRISRVDVQVSIVTAVLVTTPLICVYFFNYFITHEDMINSLKERSHSIYQYVDDYV DKTTFQNTEALTRDNPAYIRMKEKLEEVKASTNVRYLYTAEKNIQGEYVYLVDGLPYDSS DFRNPGDKIEEEIIPELTAALHDKIILPNQIKNTEWGPIFISYFPIHKGNEVVGVLGIEF DATHQYRAFQIIRIGTPIIAAIACLLAVFIAVRLFKRISNPMYKDMANTDFLTGLKNRNA FELDIQNKQDEVLGILIADLNGLKKINDEQGHQIGDEYIRKAATVIGKCASTCPVYRFGG DEFVVLVPDADDKKMKSLSERILTYEETVPKDCDIPISLSVGYALYDPVQCASLQDVFHE ADVQMYKMKNSRKI >gi|312954455|gb|AENW01000053.1| GENE 298 296205 - 297218 780 337 aa, chain - ## HITS:1 COG:SP2012 KEGG:ns NR:ns ## COG: SP2012 COG0057 # Protein_GI_number: 15901835 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 337 1 334 335 427 66.0 1e-119 MTVKVAINGFGRIGRLAFRQMFGAEGYEVVAINDLTSPKMLAHLLKYDSTQGTYAKADTV VAGENSITVDGKEITIYAEADAKNLPWGKLGVDVVLECTGFYTSKDKASAHIEAGARKVV ISAPAGNDLPTVVFNTNHDVLKPEDTVISAASCTTNCLAPMAKALNDLAPIQSGIMSTIH AYTGDQMTLDGPQRKGDLRRSRAAAVNIVPNSTGAAKAIGLVIPELKGKLIGSAQRVPTP TGSTTILVAVVKGKVTVDEINAAMKAASNESFGYTTDEIVSSDVIGMRYGSLFDATQTMA MEMEDGNTQVQVVSWYDNENSYTSQMVRTIKFFSELA >gi|312954455|gb|AENW01000053.1| GENE 299 297483 - 298052 629 189 aa, chain + ## HITS:1 COG:lin2612 KEGG:ns NR:ns ## COG: lin2612 COG0740 # Protein_GI_number: 16801674 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Listeria innocua # 1 189 1 190 198 211 56.0 8e-55 MVFVPTIIERNASSERVYDLYSCLLKERIIILTGEIDDAMSSSICAQLLYLSSISSEPIQ MYINSPGGSVSAGLAIYDIMKYIRCDVSTICMGICASMAAVLLSAGTQGKRSALSNSEIM IHQPMGGMQGQAKDMEIAALHIQKLKERLYSILSENTRQSNETLRRDCDRDYYMDAKEAL SYGLIDAII >gi|312954455|gb|AENW01000053.1| GENE 300 298117 - 298602 567 161 aa, chain + ## HITS:1 COG:Ta0599 KEGG:ns NR:ns ## COG: Ta0599 COG1607 # Protein_GI_number: 16081697 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Thermoplasma acidophilum # 4 150 2 149 165 113 39.0 2e-25 MERKAKKVCESEAEQVQLVMANHLNGSGRLFGGQLAEWIDVLAGVVARRHCNSNITTASI DSLNFKEAVHLNELMVLHGKVTYVGNTSMEIRVDSYVENRDGVRRLVNTAYLTEVALDDE DRPTTVPGLICDSEEEKQEYQAGIRRREIRLQLQNIAKGKD >gi|312954455|gb|AENW01000053.1| GENE 301 298851 - 299921 860 356 aa, chain - ## HITS:1 COG:YPO0892 KEGG:ns NR:ns ## COG: YPO0892 COG4974 # Protein_GI_number: 16121197 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Yersinia pestis # 124 350 55 290 299 73 27.0 7e-13 MKGKSVGIKKANGMGSVYKLQGNRRKPWVAFVTVSYKRKDGMRHQKRKIIGYYETEEMAE FSLWNYNKNPALYAEIEKLGTITFENVYMEWSSTKYRNISQTAINGYKAAYARCSSIWNV RMSDLRAMHFQRIMDESTLSLSSDLKLRSLMMLVCEYAVQNDIIQKNYAKYVIINRKEDH PEIHKPFTEWEIEKLFDHENIPFVDTILIMIYTGFRVGELFNIRREDVDVQNMTIRGGSK IEAGKNRLVPVHEKIQKYVMDYYLQGHEYLISDADTRKKFNYHMYRNQYFDKIMDMLEME HLPHDCRHTFATRLSNYGANSTCIKKLIGHSSYTTTEKIYTHKDVAQLRRAISTLK >gi|312954455|gb|AENW01000053.1| GENE 302 300152 - 300973 745 273 aa, chain + ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 220 1 213 259 146 36.0 5e-35 MDVNIIQALLVFVVAFIMGIDQFSFLESLYQPIVLCPIIGAILGNFQLGVVVGGAYQLIQ IGSMPIGGAQPPNAILGGIMATVFAVSMNMEATAEGVGAAMGLAIPFAVFGQYAVTLTFT IMSGMMAKADACAENADVKGIRNINFIEMGILGCLFGALAVAGLYGGSKLGITLKDLSFQ FSWVMAGLDAAGGAMKFVGFAILMKVMMSGEMLGFLLAGFAMSVICSNISAISGATLLLC AFVGIAIALYDYQVNMKIKNNAGSNVGGVSDGI >gi|312954455|gb|AENW01000053.1| GENE 303 300963 - 302012 1001 349 aa, chain + ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 9 269 27 291 292 263 47.0 3e-70 MAYNIPERYSDLTPAPQLDKKTLNKMVWMSCFLQASFNYERMQACGWLWGILPGLQKIHT NKDDLKASMAHNLDFLNTHPFLVTFVMGIVLSLEQNKTETQTIRSVRISAAGPLGGIGDA LFWLTLVPITAGITANMALNDKSIIGAILFLVIFNAVQFVVRWWLMHWSYNLGTKAVTML TSNAKEFTRAASILGIFVVGGLIANYGATSLRITVGSPTINIQSLIDGILPKLIPLLITL GIYTLIKKGWTPVKCILLILVTGIVGCAFGIWAGDSKAMDNDGNTIAGGYNPLVEWYTYD GGEKEPSAKEQKHATQEIIKQLQDLGIKIDATADAISDLGYGGSGYEQK >gi|312954455|gb|AENW01000053.1| GENE 304 302197 - 302871 666 224 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160916256|ref|ZP_02078463.1| ## NR: gi|160916256|ref|ZP_02078463.1| hypothetical protein EUBDOL_02283 [Eubacterium dolichum DSM 3991] # 1 217 1 217 224 141 36.0 3e-32 MNPILLVIIMIGGILILAYQITKNRLLNSLNRALTANDKEAINRITDKSLNQRILSPYVC DLYMLRVLFKTGQIEELKEHLNLVLDKPYTLEKRKDILDIYYYQFLFKDDAEYAEILLDR IRETNDAAYIEYNTNAYKVMILKHTDLLEDMIQGIDDKKYHGFALGITLYLAALQYYYLN DMENARIFFYNSLSCFHAKSIYAAHAQAWVDKLSKDMNAADLDY >gi|312954455|gb|AENW01000053.1| GENE 305 303060 - 303734 537 224 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160916256|ref|ZP_02078463.1| ## NR: gi|160916256|ref|ZP_02078463.1| hypothetical protein EUBDOL_02283 [Eubacterium dolichum DSM 3991] # 1 218 1 218 224 199 45.0 8e-50 MDGMAIVIAVGFIVCFLAYQMIKNHVLSKVSKAMQNQNYDLVLQLSEKSFYKRFMGSFVC DLYILRALLNKGDNIGFKKYLMETLEKPYTLEKRKEVLDIYFYHFLFHEDKEWAFRLLEK IRETNDPQYITYNEEAYSVMIEHNTDLLDTMIEGIENKKYSGLGLGIAVFMVGMQYLLLQ DKDNARTYFYNSLSCFNKKSFYYAKAKAYVDRLTEELGAEDLDY >gi|312954455|gb|AENW01000053.1| GENE 306 303856 - 304860 933 334 aa, chain - ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 9 269 27 291 292 266 48.0 4e-71 MAYNIPERYSDLTPAAKLDKKTLNKMVWMSCFLQASFNYERMQACGWLWGILPGLKKIHT NKEDLKASMAHNLDFLNTHPFLVTFVMGIVLSLEQNKAETATIRSVRISAAGPLGGIGDA LFWLTLVPITAGITANMALNDKSIIGAILFLVIFNAVQFAVRYFLMHWSYNLGTKAVTML TSNAKEFTRAASILGIFTVGALIANYGSTSLRIAIADPAINVQNLLNGILPKLLPLVITI GLFFLIKKGWTPIKCILLILVAGIVGCAFGIFAGDSKAIDENGASINGGYDPLVSWYDYP EPAAAEKTGQQAYDAIQGVVDQLNKAGVNVTMPE >gi|312954455|gb|AENW01000053.1| GENE 307 304850 - 305671 913 273 aa, chain - ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 223 1 216 259 151 39.0 2e-36 MDVNIIQALLVFIVAFIMGIDQFSFLESLYQPIVLGPIIGAILGNFELGIVVGGAYQLVQ IGSMPIGGAQPPNAIMGTIMTAVFAVSMNLEPTAEGVGLAVGLAIPFAVFGQYAVTLTFT IMSGLMAKADKAAEEADGKAIAMINFTEMAILGILFGILAVAGVYGGSKLGVTLKDLSFQ FSWVMAGLDAAGGAMKFVGFAILMKVMMSGEMWGFLFAGFVMANICMGIESVSSATLLLC AFVGLAIALYDYQINTKIKNSAGSNVGGVSDGI >gi|312954455|gb|AENW01000053.1| GENE 308 305733 - 306209 432 158 aa, chain - ## HITS:1 COG:agaV KEGG:ns NR:ns ## COG: agaV COG3444 # Protein_GI_number: 16131025 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli K12 # 1 157 13 169 169 162 50.0 3e-40 MPDIVLTRIDNRLIHGQVATQWCGVVGANLLLVANDAVSTDEFRQGLMNMAAPAYAQTRF FSIQKTIDIIGKASPAQHIAIICETPQDVLRLVEGGVPIKKVNIGNMHMADGKRQVATSV AVDDDDVATFKKLQDLGVELEIKRVPDTPVENLDKLFK >gi|312954455|gb|AENW01000053.1| GENE 309 306631 - 307803 1071 390 aa, chain + ## HITS:1 COG:VC1825 KEGG:ns NR:ns ## COG: VC1825 COG2207 # Protein_GI_number: 15641827 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Vibrio cholerae # 256 388 148 279 279 72 32.0 1e-12 MFNKTTSFIFNKYGEIVNELTKHQTPKLSRTIVKLKDKSFDNFMFYTSDIYVRVQSGIVM LVVTKDDTARSYERFVVHRHIKIRKGVKFNFLCISSSAKLEVEMDFKAKKRQMSTYDHNP IVYEPIVPTFEIKEILAYYYQVRNASYTFPGEKHNYWELTFIDNGELETTVDGETYQLDE LDLILYAPGQYHTQKTGHAKSCSYLTIMFDMEIPDSYLVTNRVYNAHRDIHNALNNFIKV SGNDMLYDSELMLCYMKELLIKILQYDFLTSSPVASTPMQQRFENELLNEIVIFINDSIY EQITIEEICLKFSISRSSLQTLFKNNLGVAPKQYISDLKLNKSKLLIKESVYTISEIASM MGFTSIHYFSRKFKQQFGITPTDYAKTIYN >gi|312954455|gb|AENW01000053.1| GENE 310 308216 - 308521 308 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|169349452|ref|ZP_02866390.1| ## NR: gi|169349452|ref|ZP_02866390.1| hypothetical protein CLOSPI_00170 [Clostridium spiroforme DSM 1552] # 2 94 1 94 94 76 41.0 6e-13 MIDWHTILWCCITLGFLLICFLLIYYIVSARMMKKKREELKDQLNRMKPGKDILFAGGIR GKIIRAKEEYLDVEVAKGIEITISRLAVNQVLEKRNSSKTK >gi|312954455|gb|AENW01000053.1| GENE 311 308536 - 308964 614 142 aa, chain - ## HITS:1 COG:YPO0837 KEGG:ns NR:ns ## COG: YPO0837 COG2893 # Protein_GI_number: 16121145 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Yersinia pestis # 1 125 1 124 146 91 42.0 5e-19 MIGLIVTGHGNFASGLTSSLKLIAGEPKNYVAVDFLESYSVDDLERELTKALDELKDCEG VLVLSDLGGGSPFKTAVMVGYPRGNVEVVAGTNLPMLIEVNMGRQFVEELGMLTEMAMNT GKDQVVRYEFKPVQQEEPTDGI >gi|312954455|gb|AENW01000053.1| GENE 312 308982 - 310160 1291 392 aa, chain - ## HITS:1 COG:agaS KEGG:ns NR:ns ## COG: agaS COG2222 # Protein_GI_number: 16131028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 15 389 13 382 384 297 40.0 3e-80 MIFGKDTKEWESLKGIYTATEINQQPNTWKKTIKQVEEHKEEIKAFIENVTKHDDYDIIL TGAGTSEFVGNAIFTYVSKRTNYKTKSYATTDIVAAPENYLSQTKPTLLISYGRSGNSPE SVGAVDVADEVCGKNLYHLFITCNHEGALSKAAEKRENAYAINLTPETHDQSFAMTSSFS NMMLATLLCFSLDNLDEVKAELEDVIKAAERMLANNWEFFKDAVGAYDFNRIVYLGANCL KGIAQESQLKILELTAGRVATMYDSPMGFRHGPKSIINDDTLTIVYLSDDPYTRQYEVDL IKEMSPQRKGNKLMAIMNKRDEEVAGLVDYAFSFDLDNEHENAFLGFDYIVAAQVLALFK SLSYDITPDNPCPTGEVNRVVKGVILHPYTKR >gi|312954455|gb|AENW01000053.1| GENE 313 310348 - 310914 791 188 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160916249|ref|ZP_02078456.1| ## NR: gi|160916249|ref|ZP_02078456.1| hypothetical protein EUBDOL_02276 [Eubacterium dolichum DSM 3991] # 1 179 1 188 196 169 48.0 8e-41 MANKAVNKKKKGMSGEDLAGMHIYKDDHNRYVYYNVFDHVGYILNDIPKYKTYSSRFIVG LIGGILAYSFDLGALLSIIIGVAAYALMEVKFRLFLKKQTQIPNFKPKERPLRLLTAASE ETKKIYMKIAAYLLFGILIILLPFSEGGYDDLMKAMCIALGILAIGVSLFQVRALFYKKA NPSLTDKK >gi|312954455|gb|AENW01000053.1| GENE 314 311161 - 312075 944 304 aa, chain - ## HITS:1 COG:FN1041 KEGG:ns NR:ns ## COG: FN1041 COG4552 # Protein_GI_number: 19704376 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Fusobacterium nucleatum # 2 283 3 299 391 89 26.0 8e-18 MLRDAGKQDKAEIYELWKQSYPNQNRNYLNFYFKNIFDKGRCIALEQDQRIISSLQLNEH ILRLRDKQLKISYILGVSTLPDYRRRGHMRRLMESALDEAGHNHLVTLIRGFYPKLYEQF GFETVYERKLYTVPRECLHKVSLTNISYAAEPQELLQAYQNFTKHFDGCYVRDREYYVLL QNEIVVTQKQMVVYRNRQGEVCGYLIFHKKKQEIHVEEAIYLESVVLMRLLKAAIGREQE ILVEVSQSEKLEKIFPLLIPKKQPFIMARINNPELFNKLYNLEVKSAAEAFASALRPLWI HEYY >gi|312954455|gb|AENW01000053.1| GENE 315 312079 - 312345 380 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVIIYLLFICLVIYIVITLLPVILPIVAIIVIAFSILIWYAKRKVRRHMEEYENEWNQQ QEEYTTGNNSNLDSDDVIDVEFTERDDE >gi|312954455|gb|AENW01000053.1| GENE 316 312418 - 312972 537 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400396|ref|ZP_06644542.1| ## NR: gi|293400396|ref|ZP_06644542.1| putative thermonuclease [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 170 1 172 182 164 48.0 3e-39 MKLRLFIMFALFPFLHATSYSAKLVSCSQDQIVLKSQDSEFRVSLFNTKITKEEGWQKTC ELLEDATSIRFEIDPSSKIEEPVPVYLFADDKLVQEELMKQGHAYPMIRNPEYTYEKRLE SAYDATQTMAKPAEVKTKSRPALVGPLYFGAALLLWLLMLLYMLHRRKKKQRPVEKEQTE AEAG >gi|312954455|gb|AENW01000053.1| GENE 317 313010 - 313948 1076 312 aa, chain - ## HITS:1 COG:BS_yvcL KEGG:ns NR:ns ## COG: BS_yvcL COG1481 # Protein_GI_number: 16080528 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 310 1 308 316 237 43.0 2e-62 MSFTTEVKSQIAANELHPCCMKAELTAVLQMCSTMNFTSEGMHLTVKTENANTAKRVFRF LKELYQVDTQLSVIKKMKLKKNNIYVIRVKNKAMEILRDLEIMTERGLQNHPSSKMVRKE CCARAYLAGAFLAGGSVNSPSKSNYHLEISTQNVDLAKFIWKLMQRFDLPAKQIRRRNQE VVYLKASDKISDFLRCVGASDAVFTFEDSRIQRDFMNSLTRLDNCELANEMKSITAGKKQ LEDIQWIETYRTLDSLPEKLQHVAYARKQLPEASLNELCEYCAEEFNETISKSGMKHRLA KLRELADQYRKE >gi|312954455|gb|AENW01000053.1| GENE 318 313951 - 314898 1110 315 aa, chain - ## HITS:1 COG:BH3568 KEGG:ns NR:ns ## COG: BH3568 COG0391 # Protein_GI_number: 15616130 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 2 308 4 312 322 268 45.0 7e-72 MKNVVVIGGGTGLSVMLRGMKQIENINLTAIVTVADDGGSTGRIRRQFHIPAMGDVRNVM CAMAEEESIFTSLMNYRFDGECDDVGGHNLGNLILTAMTKTTGSFMEAIRTFSKFLNVKG QIIPSSLQVITLYAVMEDGTIVRGESNIPNFNNRIEKVFYQQRVEPTREALQAIHEADVI VYGIGSLYTSIMPNLIVDGVVEQLRSNPVKKIYFCNAMTQPGETDDFTLEDHVAAIQKHS FSEAVDIVITHNNRAQRHILEKYKDMGSEPVRVAQEEHSYQILYRDVLNFDDDLIRHDSN KIRDVLGEIINSKDE >gi|312954455|gb|AENW01000053.1| GENE 319 314903 - 315757 823 284 aa, chain - ## HITS:1 COG:BH3569 KEGG:ns NR:ns ## COG: BH3569 COG1660 # Protein_GI_number: 15616131 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Bacillus halodurans # 3 284 6 292 295 221 39.0 8e-58 MNEQNVVLITGMSGAGKTTAMGILEDMGYHCIDNFPVQLLESLGKIINAKPDPRYSNIAL ATTAIDYPKFLQYFENIDVNVRVVFLDASNEKLLLRYKFTRRHHPMMMFSKANTLEEAIE VERDMFNALNERAVLHIDTTMMDQHGLKSVLMEKLSLNSKPVFSISFVSFGFKHGVPMDV DLVFDVRFLPNPYYIEELREQTGDDAPVYDYVMSFDQTKEFIRHLKSFLDYVFIQYKNEK KNHLTVGIGCTGGHHRSVSVTNWLYSHYRDQYHCYKSHRDKKAG >gi|312954455|gb|AENW01000053.1| GENE 320 316279 - 316710 559 143 aa, chain + ## HITS:1 COG:CAC3256 KEGG:ns NR:ns ## COG: CAC3256 COG0454 # Protein_GI_number: 15896501 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 3 132 2 133 140 77 36.0 1e-14 MRFLCKENALTASIYIDLRRKVNFKEYRKEDVETAIANSLYSVVVFDDKRPIGIARIVGD GRIAFFIKDVVVDPAYQKNRIGNLLMQKLQEYLAGAACEGAYIGLMSTPNCVPFYKKHGF LERPCDGMGPGMVKFYDPCEVRK >gi|312954455|gb|AENW01000053.1| GENE 321 316707 - 317624 1055 305 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 3 298 4 301 308 200 40.0 2e-51 MKKVIVLGSLNMDLTIQCVDLPKNGETINGSDFFVNPGGKGGNQAVAAAKLGAETHMIAN IGNDVFGEQLLEALQGYGVHTKGVFRDAHETSGVAMIIRSHGDNRIILGNGANHTLPEAA FVEMLQKLARKDDIFLTQLENDYALVRNALRHAKQAGMYTMLNPAPARVLDSDVYEHLDL IVVNQSECELLTGIYPSDEESCMEALLSFEARGVDALITLGTHGSMCNAFGRYLFVPAQK VETVDTTGAGDSFIGALCSCLSRDVDMKEAMEFATRVAALTVTRRGAQASIPYKKEVEHY FKEEN >gi|312954455|gb|AENW01000053.1| GENE 322 317626 - 318546 1246 306 aa, chain + ## HITS:1 COG:STM0051 KEGG:ns NR:ns ## COG: STM0051 COG1957 # Protein_GI_number: 16763441 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Salmonella typhimurium LT2 # 6 303 7 303 306 305 54.0 5e-83 MNKRPIIIDTDPGIDDALAIAIALFSDELDVRLISTVAGNVGLDKVTYNALRLLKYFGRE DVPVAVGADRPLIREFEDASSVHGKSGMEGFDFEEPTQQPLKENAVDAMRNVIMNSSEPV TLVPIAPLTNIALLLKTYPEVKRNIREIVLMGGSASRGNKGVMAEFNIALDPEAAHMVFH SGVKLTMVGLDVGLKALVLPEDSEEIRTMNKTGEMAYCLFKKYRGGSFRTGLKMYDATAV AYLLKPELFEAVETYLDVELHGTMTAGCTLVDLKGYLGKEPNATVCLDIDGNAFRTWFKE AIAKCR >gi|312954455|gb|AENW01000053.1| GENE 323 318576 - 319991 1666 471 aa, chain + ## HITS:1 COG:dcuD KEGG:ns NR:ns ## COG: dcuD COG3069 # Protein_GI_number: 16131117 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli K12 # 11 470 5 454 455 187 30.0 5e-47 MNDIIMYGSALIAVIIVVIMLIKKMDIKVTLFAMGIVLMYIAIAMGNPIAIKEFESTGLT VLDPLKAVIDQFKSTLPAAGFIILILGGYSAYMTSIGANEVTVHTLTKPIKKIKSVYILV PLVFLIGNVLSLVIPSASNLAIILLATLYPVLRQAGMSPLTAAAVIATTATVMPTPLGGD NVAVATELAKYPAFAGMSVTDYVIQYHAMISVPTLIVMAVVHFFWQKFMDKKNTGKLEDN VEVHEVKAIPEGGLYRFVYTLLPIFPILLLIVVYIIRSVTGSNVDISVEVASLLSFLIAI VCEIIRTKDSGKVLKQTEDFFKGMGSSMPIVALLVAASVFVLGLNSIGLIDALQTAMLGV QGSGMGFVLPLILMGLTILIVLLSGSGTALFYAMVPLMVPLAEAAGISAIAVSIPMGLCG NLMRAVSPVAAVVVIVAGTIKANPLDIVKRTSVPMIAGVVTMFVLSMIMFL >gi|312954455|gb|AENW01000053.1| GENE 324 320092 - 321093 830 333 aa, chain + ## HITS:1 COG:lin2102 KEGG:ns NR:ns ## COG: lin2102 COG1609 # Protein_GI_number: 16801168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 2 333 4 333 336 186 29.0 5e-47 MTIKDIAKKAGVSVSTVSLVLNDRPCRVAQQTRDTIKDIAKQYNYKVNQTARSLVTRKSN ILGLIIPDIENLFFSALCKRMEEYLRELGYALMIVNSNDHAADDSMLIDLLVSRGVDGLG ITVSNESYQDETIRKKLASLSIPYVMIDRMYPDLNCSKVYFDNESGAYMAIEKLVKSGHK KIACIGISSASKTGASRVAGYRKAMQQFQLEVREDYILDGNYRFQGGYTCAKQLMKMDVT AAFICNDMMTLGVMRYFQEHHVRIPQDISIVSYDNTLNRFTLGTEITSVDQNVGLLAKTS CNELLAQLRDPAHRKQDICLKPQLIEKDSVQII >gi|312954455|gb|AENW01000053.1| GENE 325 321182 - 322486 853 434 aa, chain - ## HITS:0 COG:no KEGG:no NR:no KNPYQEHYYSASMVDVDIYTNGDNSIGVLADWFQIEYSRIEVNGTGSKAIQIPDGCYIGN EVIIVENNQPLEKAWKLDTPMPAKEIAALQSHMVDDLPLPKQVEVTAVSETGEEKSFQIS LQYDTTAYERGMQTHKPFYLYGIADESSRERIDIIEHAFPFYIIPDSEPVFDMSLYMIRN DTDYYFHFPRAYNAKAIHLYTSTDKTHWKFQHNSIHSMSQYAPGSIVLPPYIVVYMLQVT EPFTYARVEIIGGYYDGRSYVLKVHDAAGNPIPDASDQNKNDGGGEGNDGQGGGRGESPY VPDTPNDKDETIPWTIGQDASQISEAVKKEQRKKEKVNRMEKHEGKPDAKQTTTQADCAD TEQLYTGKNKNTGSSQIKQSQSAVLREFLTLNPAALKDMITGEQYETISQSGNIMGEVWE SSAPFLRILQRLFQ Prediction of potential genes in microbial genomes Time: Sat May 14 03:11:01 2011 Seq name: gi|312954418|gb|AENW01000054.1| Clostridium sp. HGF2 contig00075, whole genome shotgun sequence Length of sequence - 37247 bp Number of predicted genes - 34, with homology - 29 Number of transcription units - 11, operones - 7 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1986 602 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 2162 - 2221 6.5 2 2 Op 1 . - CDS 2268 - 3695 471 ## BC1265 putative cytoplasmic protein 3 2 Op 2 . - CDS 3774 - 3959 136 ## - Prom 4005 - 4064 8.8 4 3 Op 1 12/0.000 - CDS 4630 - 5535 269 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 5 3 Op 2 . - CDS 5547 - 6431 281 ## COG0451 Nucleoside-diphosphate-sugar epimerases 6 3 Op 3 . - CDS 6432 - 7550 298 ## BC5272 carbamoylphosphate synthase small subunit (EC:6.3.5.5) 7 3 Op 4 . - CDS 7565 - 8029 240 ## - Prom 8054 - 8113 8.4 - Term 9061 - 9089 -0.0 8 4 Op 1 3/0.000 - CDS 9325 - 10461 404 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 9 4 Op 2 . - CDS 10448 - 11482 223 ## COG0673 Predicted dehydrogenases and related proteins 10 4 Op 3 . - CDS 11484 - 12878 347 ## BF0809 putative dNDP-4-keto-6-deoxy-glucose-2,3-dehydratase 11 4 Op 4 16/0.000 - CDS 12883 - 13776 725 ## COG1209 dTDP-glucose pyrophosphorylase 12 4 Op 5 . - CDS 13778 - 14806 218 ## COG1088 dTDP-D-glucose 4,6-dehydratase 13 4 Op 6 . - CDS 14817 - 15437 139 ## gi|293401741|ref|ZP_06645882.1| hypothetical protein HMPREF0863_02022 14 5 Op 1 1/0.000 - CDS 16535 - 17992 229 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 15 5 Op 2 5/0.000 - CDS 17985 - 19085 531 ## COG0562 UDP-galactopyranose mutase 16 5 Op 3 8/0.000 - CDS 19095 - 20048 182 ## COG1216 Predicted glycosyltransferases 17 5 Op 4 26/0.000 - CDS 20041 - 20943 262 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 18 5 Op 5 . - CDS 20936 - 22084 401 ## COG0438 Glycosyltransferase 19 5 Op 6 . - CDS 22097 - 22276 62 ## - Prom 22394 - 22453 7.1 - Term 22943 - 22988 1.4 20 6 Op 1 26/0.000 - CDS 23211 - 24038 145 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 21 6 Op 2 8/0.000 - CDS 24022 - 25173 190 ## COG0438 Glycosyltransferase 22 6 Op 3 3/0.000 - CDS 25187 - 25813 144 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 23 6 Op 4 5/0.000 - CDS 25829 - 26428 100 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 24 6 Op 5 . - CDS 26428 - 27654 303 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 25 6 Op 6 . - CDS 27688 - 28200 225 ## Elen_1920 NusG antitermination factor - Prom 28373 - 28432 7.4 - Term 28503 - 28540 1.5 26 7 Tu 1 . - CDS 28548 - 30443 713 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases - Prom 30515 - 30574 7.5 - Term 30790 - 30828 -0.8 27 8 Op 1 . - CDS 31011 - 31250 127 ## 28 8 Op 2 . - CDS 31247 - 31402 129 ## 29 8 Op 3 . - CDS 31455 - 31748 131 ## LCABL_14620 transposase IS4 family protein - Prom 31768 - 31827 4.0 30 9 Tu 1 . - CDS 31907 - 32305 110 ## gi|237733018|ref|ZP_04563499.1| predicted protein + Prom 32850 - 32909 6.9 31 10 Tu 1 . + CDS 33108 - 34073 149 ## gi|260436992|ref|ZP_05790808.1| conserved hypothetical protein + Term 34092 - 34149 2.4 32 11 Op 1 . - CDS 34220 - 35413 487 ## COG0582 Integrase 33 11 Op 2 . - CDS 35492 - 35698 259 ## SMU.1031 putative transposon excisionase; Tn916 ORF1-like 34 11 Op 3 . - CDS 35691 - 36833 848 ## COG2946 Putative phage replication protein RstA - Prom 36936 - 36995 4.3 Predicted protein(s) >gi|312954418|gb|AENW01000054.1| GENE 1 3 - 1986 602 661 aa, chain - ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 43 433 478 887 2566 122 30.0 3e-27 MKTLIILSTVISCMGGQVLPAIPLRQEAPPVVSSVASIDSHIVVKNGKAYYMENGKVLMG LFSRNNKTYYAPEWDKGALKTGLQLVNGKKYYFDEVTYAQRTGIVEVSYGSNTQKHYFLS NGGIAMGLYTDNKGDTYYFAGTNGVLVYGLQNINGKKYYFDEKTGKQKVGLVTIDYGNGK QTHYFLKDGGVATGLYTDNKGDTYYFAGNNGIMAYGLQNINGKKYYFDEKTGKQKIGFVT INYEKGEQTHYFLKNGGIKQNGFEVIDGKKYYFAKDSGIMYKDIKIINDKKYYFHPKTGE LLNGIYRANNGFTYYFDENTASGVRTGLQTYQGDTYLFHKESGIMLTGLFSVGKDLYCFD ETSGKALKNTSYNLYHVIIQFNNKGIMMNHYIDDDYKDDVRPNIINKALDKIGVRYTTDP DGYVCSSFVTFAYENLGIDLWDYRAESFEQAMFVKNNNKEITREQLKPGDLIFWSKPNCG DPECDHTDQVHHIAIYLGNNKVIEANETFGLVDVQNITSDDNYVLYSYGNIIPQELESLE APEKLEVTPGTNDKLNITWESNELADGYILYRKDPNETIYKQIAKITGNMNTSYADTATK RSLYSYKIASYKNVKGKEKVSEMSMAVDGMRLLDAANNLNAVPAGKNKVKISWDKVENAE G >gi|312954418|gb|AENW01000054.1| GENE 2 2268 - 3695 471 475 aa, chain - ## HITS:1 COG:no KEGG:BC1265 NR:ns ## KEGG: BC1265 # Name: not_defined # Def: putative cytoplasmic protein # Organism: B.cereus # Pathway: not_defined # 315 472 59 219 327 94 34.0 1e-17 MRILKNVISSILVMFMFLYGINVNVKANSDEIAKLNMNETYSNIDLTAVTNFNTQIMGAN LVKLSWNAVKGADGYIIYRKIADGKFEYRYMVSNTTYTDTTAQTGEYNFYRVYPYKNVNG KRVLGPSNEYKYVKPAPLGVKNLKAQATGTTSIKLTWNAEKDADGYIIYRKIADGIFEYR YMVSNTTYTDTTAKTGEYNFYRVYPYKNVKGKRVLGPSNEYKYAKPMPLAVTNLKTIRQN SNIKITWNTVSNADGYIIYRQSPNDSKMVYRYMVNSTSFVDTQTSAPGYYYYRVYAYKNV NGKRVLGPSNNYSYVKIPKTIKKYIEGMYRVGIDVPEGEYIVFKNNANLGYYKVTLTGNN DDIITNDILEYNGYITLQKGQSISLNGLDMYPVNHAPDLDMSSEGMFKVGKDIPAGTYNV VVNPEKEYGYYAICNDSYNRWDSIESNDYFKGNRFVTVKDGQYLQIKDSKIERIN >gi|312954418|gb|AENW01000054.1| GENE 3 3774 - 3959 136 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIMNIYAYSGIDYKFGPILTTTSYIFVVILSIYILKEKLNKNKIIGISLILIGIVIFNIK I >gi|312954418|gb|AENW01000054.1| GENE 4 4630 - 5535 269 301 aa, chain - ## HITS:1 COG:RSc1321 KEGG:ns NR:ns ## COG: RSc1321 COG0463 # Protein_GI_number: 17546040 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Ralstonia solanacearum # 3 298 6 310 332 110 27.0 3e-24 MKITIVIPCYNSADTIGKVVDLTSKFLNELKGISYDFVLVNDYSKDQTYKKIEEISKSYK NVIGVNLAKNAGQHNAILAGLSIKESDYYLGMDDDMQTHPSQIEKLINKISEGYDVVYGK YTNTTSKGIKKITSNLHNYSVEKLIGKPKGLKATSFWIIKKKIRDKIILYPSQFTDLQSL FLRTTANITNVELEHFERISGSSNYTFRKSLKLWSSILNFSAQPFHYLMVVSIVIIILSI FFTLFFAFNRNNNYLLCLIASCIGLLLFSISLLGIYIVRMMFVITQTPQYMISEITEENI D >gi|312954418|gb|AENW01000054.1| GENE 5 5547 - 6431 281 294 aa, chain - ## HITS:1 COG:MA1185 KEGG:ns NR:ns ## COG: MA1185 COG0451 # Protein_GI_number: 20090051 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Methanosarcina acetivorans str.C2A # 1 288 1 300 311 97 27.0 2e-20 MRVVVVGANGFIGVNLIKRLLKCQYDVIGIDQYDNHLQMFLDNSSFKLIKGQVSYDVLMN VLQPDDAVVCLAAKRLTPNFNLNDYVANIHLNCDIFQSCMDSNTKNVVFLSSISTYRADN ESCSEEIDTGSGNLYGESKYAMDHLINFLNKKKEMCIKSLRLAQVIGTGERKGYLLNTLL DNAKEYKEQVIYGSGCGERQYIYIKDVISAIICAIEAKNAKGIYNIGIKGRISISNLAKL INRVFKNEAGIKYLLEKPEDKSILEMDVSKAEKELNFKPKYDLEAAIQDLKNYY >gi|312954418|gb|AENW01000054.1| GENE 6 6432 - 7550 298 372 aa, chain - ## HITS:1 COG:no KEGG:BC5272 NR:ns ## KEGG: BC5272 # Name: not_defined # Def: carbamoylphosphate synthase small subunit (EC:6.3.5.5) # Organism: B.cereus # Pathway: not_defined # 1 368 1 368 371 295 43.0 1e-78 MTRKVLILGAGNAQYDAIKYCKEKGFEVYGCSYTDTDKSIPLLDHFEKINIIDVDEVKEY AMKINADIVYSVGSDVAMPTACKVSEQLNLPYFVSSETAIICNNKQQMRDYLGSDFEGNV HYFVSSNKDDLNEETLNFFPMMMKPVDSQGQRGVRLVSNMDEVLEEYDESMSHSKSKKII FEEYLNGPEISVNAYVYEKELKFFLVSDRVSFEEYPGGIIKEHHLPTKESPVVVERIRAL VERVVNKLNIENGPVYFQIKIVNDVPYVIEVTPRLDGCHMWNVIKEYCGFDLLDATFQHL LGNEQLAFGMKEKEGKFKLVFTCEKPNTAFDRSKYIIPDKCCYLRWYYENGDNVRVLNGF MEKGGYYIEEVK >gi|312954418|gb|AENW01000054.1| GENE 7 7565 - 8029 240 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYDDSNIFNLNSKINSKETKLLFTTQRQAETVNDVLNILNNSIYDNKELLVYGDSVLLYE LSNKEAYVRPWINVSSYSIKEFSQDLEEKLKENSSLPLIVICRTSSYFGFDEVGYLSNLE RTSQINEKKMILNNFITNNEYKLVYENEYYSVYE >gi|312954418|gb|AENW01000054.1| GENE 8 9325 - 10461 404 378 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 360 1 360 376 369 51.0 1e-102 MIKFNKPSITELEINKVVDCLNGNSILSGDGKYTTEVYEHFKKRFHIDNMLLTTSGTTAL EMASILIDLEPGDEVITPSFTFSSTVNAFLLRGANPVFCDIREDTFNIDENLIEDLITSK TKAIYAVDYAGFPCEMDKINEIANRHGLFVIEDAAQAVGSTYKGRYAGTLTEFGCFSFHE TKNYVMGEGGAIVVNEDKYMERAEIIREKGTNRRNVLRGLVDKYTWHDIGSSFLPSDLLA AILSAQMERYDEILEKRMNVWNTYYNGLECLEKEGLLRRPVLPEGIEHNAHMFCIVLPDE DTRTKLINSLKEKGISSYICYVPLHSSPYGQKLGYTPEMLPVTEDLGKRILRLPLYVDMT TEDTLYVVDEISKSLKRG >gi|312954418|gb|AENW01000054.1| GENE 9 10448 - 11482 223 344 aa, chain - ## HITS:1 COG:BH3843 KEGG:ns NR:ns ## COG: BH3843 COG0673 # Protein_GI_number: 15616405 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 4 208 5 196 334 118 31.0 2e-26 MKKIRIGIICPSEIAFRRFLPSLEKEEHFTYVGVAIASKEEWDGDVADTVIENEWKKGKT FVDTYGGKIFESYSSLIMSNEVDAIYLPLPPALHYKWAKKALENDKHVFVEKPSTTNYQD SLNLVKLAEERKLVLHENYMFQYHSQISEIKKEIENGEIGKVHSYHARFGFPRRDKNDFR YNKELGGGALLDAGGYVIKLATKLLGEDITLESCIMNSYEDFDVDLYGSYMFRNSKNEVF IGEYGMDCEYQCMLSIWGSRGIMQTDRIFTAPDNLKPSLKIIQSGEVKTIELSCDSHFKK SICQFYNAINDTAVREKIYNEILLQAQLVQKVRDISGGIGNDKI >gi|312954418|gb|AENW01000054.1| GENE 10 11484 - 12878 347 464 aa, chain - ## HITS:1 COG:no KEGG:BF0809 NR:ns ## KEGG: BF0809 # Name: not_defined # Def: putative dNDP-4-keto-6-deoxy-glucose-2,3-dehydratase # Organism: B.fragilis # Pathway: not_defined # 7 462 1 455 460 321 40.0 4e-86 MKNTIILLYESWLNKAGNVTRNDEIDEWIEQRNNDLEVQIEKISLNECSPWYYDEKEGQI RNQNLSFFTVKGFQRKREKDVILEQPVILQNEIGYLGIICKEIDGVLNFLMQAKIEPGNI NKIQLSPTIQATKSNFTQKHGGRKPNYLEYFLNAVDHEIIVDQIQSEQSSRFYKKRNRNI IIKVQDEVLLKPNFKWMTLGQIKRLMKKDNIVNMDTRTVLSCIPYYNHSFSTNELKAMEA KANDKSLFKSIFTMHDEYMIPRIYQQINNSKMFDDEEDALVSLDQLSTWKHIEKEIKCVH EHDFKVIFCDIMIEGREVTRWCQPLFEATGIALFGLFICNDDGVKKFLVRIKKEIGCFDS LELGPTVQLEPSKIQNNQDQIVDLFMNKMNHNVDIIHDVLLSEEGGRFYHEQNRNVIIEI NKNEIHAVEEEGYFWVSYRTLNQLVQVNNCLNIQLRNLISLLEV >gi|312954418|gb|AENW01000054.1| GENE 11 12883 - 13776 725 297 aa, chain - ## HITS:1 COG:CAC2333 KEGG:ns NR:ns ## COG: CAC2333 COG1209 # Protein_GI_number: 15895600 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 1 287 1 288 288 397 66.0 1e-110 MKGIILAGGSGTRLYPLTQVVSKQILPVYDKPMIYYPLSTLMLAGIKEILIISTPRDVVV FEELLGDGSQLGLSIEYAIQEQPRGLAEAFIIGEKFIGNDHVALILGDNIFYGRHFTATL NEALSKKGATIFGYYVDNPKEYGVVTFDKDYKVLTLEEKPEIPKSHYAVPGLYFYDNDVV EIAKTIKPSARGELEITSVNNEYLRRGKLNIKVLGRGFAWLDTGNPNALLEASEYVGAVQ KRSGLYVSCIEEIAYIKGFIDKIQLLKLAEKFAKTDYGKYLLRLAEEDANEVSVVRG >gi|312954418|gb|AENW01000054.1| GENE 12 13778 - 14806 218 342 aa, chain - ## HITS:1 COG:MTH1789 KEGG:ns NR:ns ## COG: MTH1789 COG1088 # Protein_GI_number: 15679777 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Methanothermobacter thermautotrophicus # 2 336 3 330 336 439 61.0 1e-123 MKILVTGGAGFIGGNFVHYMVDKYPDDVIVNLDLLTYAGNLETCKPVEDKTNYKFYKGDI ADRAFVFDLFEKEKFDVVVNFAAESHVDRSIEDPESFVRTNVMGTTTLLDACNKYGIQRY HQVSTDEVYGDLPLDKPDLFFTEETPLHTSSPYSSSKAAADLFVLAYHRTYGLPVTISRC SNNYGPYHFPEKLIPLMISRALAEESLPVYGTGENVRDWLHVYDHCVAIDLIIRKGEVGE VYNVGGHNERTNLEVVKTILKALNKPESLIKYVEDRKGHDLRYAIDPYKLETELGWKPKY NFDTGIQQTIQWYLDYKEWWQNILSGEYQNYFNKMYKEKGRV >gi|312954418|gb|AENW01000054.1| GENE 13 14817 - 15437 139 206 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293401741|ref|ZP_06645882.1| ## NR: gi|293401741|ref|ZP_06645882.1| hypothetical protein HMPREF0863_02022 [Erysipelotrichaceae bacterium 5_2_54FAA] # 2 205 373 575 578 150 40.0 4e-35 MYLGRLNYRVEYSIFLAATAFLLFSIQISESRIEKFSDKVLIAVLIVLCVCRIPVYIPSY GKSSYDALFISWNNDLAKYNASFEKEKDMSVINEIKQNPNNFYYLGFYSNIQTLYLNYNP WKGIQKSEFKNAAFFAGIDTFHPDWMKHLVKHSINNPMEHLLKENVYFIENRPINEILTF IQEHYKVNVEMTLHKKIGSYYIWKIR >gi|312954418|gb|AENW01000054.1| GENE 14 16535 - 17992 229 485 aa, chain - ## HITS:1 COG:FN1682 KEGG:ns NR:ns ## COG: FN1682 COG2244 # Protein_GI_number: 19705003 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Fusobacterium nucleatum # 5 471 4 477 486 140 30.0 7e-33 MNKIQSVKKNFVMNFILTAANFIFPIVTFPYVSRILLAEGTGKVAFAASIASYFSMIAAL GIPTYGIRACARIRDDKDKLNKTVQELLIIHMSATSLALMFYFISVFIVPELYKEKTLML INSLSILLNVFGVNWLYQALEQYSYITYRSIFFKIISIILMFFFIHQKSDYIIYGGIAIF ANAGSNILNFIRLRKLINFKKVESYSFLVHIRPILVFFAQSVAITVYTNLDTVMLGFMQS DIEVGYYNAAIKIKTILLSLVTSLGTVLLPRLSYCIQKNDKIQFQTLISKSIRFVFIIAL PLTIFFILFAKETLIVLSGRDFIGATLAMQIITPTILLIGLSNITGIQILTPLGKEKFVV YSVTFGAILDLIVNYICIPRLGAAGASLGTLIAEFSVLAVQIMYTSKQLHEVKCGFKIFK IIISCLFASILVLFINLFTDFTVFFSLFVYAILFFGSYVICLILLKEEFVVDYIYKGYSA LKTRR >gi|312954418|gb|AENW01000054.1| GENE 15 17985 - 19085 531 366 aa, chain - ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 1 360 1 360 367 468 61.0 1e-131 MYDYLIVGAGLFGSIFAYEAKKRGKNCLVIDKRPHIGGNIYTKEVEGINVHEYGAHIFHT SNHEVWEYIQQFATFNRYTNSPIARYKDEIYNMPFNMNTFNKLWGVITPEQAKKKIEQQI KESGITDPKNLEEQAISLVGRDIYEKLVKGYTQKQWGRRCDELPSFIIKRLPVRFTYDNN YFNDLYQGIPIGGYTQIIEKMLEGIDIRLNCNYFSNRKELETIANKIVFTGMIDQYYDYC FGELEYRSLRFETEVLEMENYQGNAVVNYNEYEIPYTRIIEHKHFEYGETRKTVITREYP ATWKIGDEPYYPMNDEKNNYLYEKYKALADKENKVIFGGRLGMYKYYDMHHIISEALDMV GKEFNE >gi|312954418|gb|AENW01000054.1| GENE 16 19095 - 20048 182 317 aa, chain - ## HITS:1 COG:MTH348 KEGG:ns NR:ns ## COG: MTH348 COG1216 # Protein_GI_number: 15678376 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Methanothermobacter thermautotrophicus # 4 312 2 312 313 145 33.0 1e-34 MNKKVCVLLCTYNRKKCLEKVLNALSNQTHQISGIVVVDNHSTDGTLCHLNALGLNLHEK INEVQITNLNNIKFYYYLNEKNEGGAGGFKKAFEIGLKYDYDYYWVMDDDVLPEVNCLEI LLEGMDENHKVCIPNRTCENFKDNAVIKMNFDNFFKRVEDKQVISDFTGKEKIEVVDFAF EGPLFTSEILREVGLPDDNYFLLFDDSDYAYRCTKITKIHFMVNAKLNRQLPLPNTSEPV YWKQYYMLRNSFVFDMKYGKNFIFKRLRPMYFCLFSYLRAISKCSFPRIRYTKKAYHDAR HNLLGKQVEPGEKFGRK >gi|312954418|gb|AENW01000054.1| GENE 17 20041 - 20943 262 300 aa, chain - ## HITS:1 COG:L17695 KEGG:ns NR:ns ## COG: L17695 COG0463 # Protein_GI_number: 15672198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 13 234 12 229 285 137 37.0 2e-32 MSDIKITIMTPTYNRSSFLPKLYETLTKQTVDLTMMEWIIVDDGSTDDTEDIVHKLKEKS PFGINYIKSTNRGKHHAVNMGIENATGEFFFIVDSDDTLPENSIERIIFWFTTLKSEQEK FAGIGGLKSYEFSGDVGESFEGEYLDCSSIERREKNIKGDKAEVFYTDVIKKYRFPEFSG EKFLSECVLWNEIARDGYKIRWFNEPIYRCEYLDSGLTRNIYNHLAKSPKGFLLYTIELM QYEAGSELKRMYYAGAYHVLVENIKLSVLSKKLKISVLKIVVGSYIFRIVQKRKGRRINE >gi|312954418|gb|AENW01000054.1| GENE 18 20936 - 22084 401 382 aa, chain - ## HITS:1 COG:BH3663 KEGG:ns NR:ns ## COG: BH3663 COG0438 # Protein_GI_number: 15616225 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus halodurans # 2 375 3 366 373 117 27.0 4e-26 MKKKILFSITNLIGGGAEKILLDTVKAMDKTKYDVYVFSLLNEGIYIEEIKKYATYFFAF DLEAYPERLRNYIRFLFLRYIKFSKKEKLYKKYVQGEYDYEIAFLEGPVTKIIAGSKSRT PKYAWVHVDLINLPDSNKYYRSKEEAKECYNFYNKILCVSSDVKTSFLKIYDVDEEKVQV QLNVLDTNKILNSIKNVTEYKRQNPLNLITVGRLSPQKGYDRLLKCCVRLKEDKLTFKLK IVGTGLLKDTYQKFIDDNKLNDCVELTGFIDNPYPLLKKADLFVCSSLTEGFSTVVSEAI FLGTPVLTTDCAGMKDILGDSEFGLIVENNENGLYEGLKQLLMDKDKLNELREKAVERSP FFDLQARLYEFDCLFEKGNEYE >gi|312954418|gb|AENW01000054.1| GENE 19 22097 - 22276 62 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEPLFILLSEKKINNYFEFKKFKIKLTHILSIIMLFLSIASILATYANIIAYGWYWIF >gi|312954418|gb|AENW01000054.1| GENE 20 23211 - 24038 145 275 aa, chain - ## HITS:1 COG:BS_yveO KEGG:ns NR:ns ## COG: BS_yveO COG0463 # Protein_GI_number: 16080486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 4 274 1 269 278 174 37.0 2e-43 MREMNKEPLISVIMGVYNDQRFLKEAIESILCQTYKNFEFIICNDCSADQSTKILEKYKK IDNRITIINNKKNMGLAASLNRCIDISKGDYIARMDSDDRALSDRFSIQVEYLNEHPETS VIGTNVYYIDNSSNRYSKTEFPHMKSISLKEAVKQTSLIHPSVMMRKEAILNVNKYTVTE LTCRAEDYDLWCKMKEERMVLEIIGDYLLEYREDESGIKKRKYVYRIQEAKLKFYWMKRT GMTKYLFIYALKPLIIGMIPKKVYKKLHKRRVIDV >gi|312954418|gb|AENW01000054.1| GENE 21 24022 - 25173 190 383 aa, chain - ## HITS:1 COG:BS_yveN KEGG:ns NR:ns ## COG: BS_yveN COG0438 # Protein_GI_number: 16080487 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus subtilis # 2 334 3 321 381 159 31.0 1e-38 MKRVLMTATVPSMIGQFNMDNIKLLQELGYTVDVACNFDDYSVWNRERIKKFESELKELK IKKINISFSRSPKNIKNIINSYKQIKQLLNDKNYSLVHTHTPISSFITRLAYKKSNIYGT CKMIYTAHGFHFFKGNASVKNFIFRNIEKIGAKYTNVLITINKEDYIAAKKFKLKKSGTV EYVPGVGIDIDKINLIKENKIQLCEELNIPKDAILILSVGELNANKNHKIVIEILPELPN NVHYLMCGDGQLKEQHERLAKKLHVSDRLHFLGYRKDVIKIMKSCDIFVFPSKREGLSVA LMEAMACGLPCVVSKIRGNEDLIENEKGGYCVDLENEKFNIYINKILELGLSKSMSAFNY NKVSNYSIKKVNLKMREIYERNE >gi|312954418|gb|AENW01000054.1| GENE 22 25187 - 25813 144 208 aa, chain - ## HITS:1 COG:Cgl0360 KEGG:ns NR:ns ## COG: Cgl0360 COG0110 # Protein_GI_number: 19551610 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Corynebacterium glutamicum # 2 205 5 215 215 113 32.0 3e-25 MNNIIIVGASGFGREVAWLIENSDNWNVKGFVDDNKDLENKSVNDYPVLGTIDFLLNANE KTNVVVAIGNPQIRKKIVERLQSNKNISFPNIVDKDVIIDRTITLGFGNIICKGNILTTN IEIGNFNHINLSCTIGHDVQFHDYITVYPGVNISGNVIMNDCVEVGTGTKIIQGKKIVEE TVIGAGSVVVKDIVENGTYIGVPAKQMK >gi|312954418|gb|AENW01000054.1| GENE 23 25829 - 26428 100 199 aa, chain - ## HITS:1 COG:NMA0639_1 KEGG:ns NR:ns ## COG: NMA0639_1 COG2148 # Protein_GI_number: 15793627 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Neisseria meningitidis Z2491 # 5 199 4 198 223 241 59.0 7e-64 MYRLFFKRFLDFTLSLIAIILLSPIYLIVAILVRVKLGSPVIFKQKRPGKDEKIFKMYKF RSMTSETDGEGNLLPDEVRLTSFGKKLRSTSLDELPELFNILKGDMSIIGPRPLLVHYLP LYNGFQKQRHDVRPGLTGLAQVSGRNAISWEEKFEKDVEYTKEYSFLLDMKILFMTVKTV FKKEGISSDTSSTMEEFKG >gi|312954418|gb|AENW01000054.1| GENE 24 26428 - 27654 303 408 aa, chain - ## HITS:1 COG:BS_yvfE KEGG:ns NR:ns ## COG: BS_yvfE COG0399 # Protein_GI_number: 16080476 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Bacillus subtilis # 7 271 4 272 301 282 49.0 7e-76 MEKFKDKIWLSSPTMHGEELKYITEAYKTNWMSTVGKNINEIERMICEKVGCKYAVALAS GTSSLHMAVKLAGVKPGDKVFCTDMTFGATVNPVVYEGGIPVFIDTEYDTWNMDPIALEK AFELYPEVKIVVLVHLYGTPGKIDEIKAVCKKHNVIIIEDAAESLGARYKGVQTGTFGNY NAISFNGNKIITGSSGGMFLTDDKEATEKVRKWSTQSRENAPWYQHEELGYNYRMSNVIA GVVRGQIPHLEEHIAQKKAIYERYRKGLKDLPVKMNPYDEENSEPNFWLSCLIIDKEAMC KQVRSEQEALFISEAGKTCPTEILEELTKYNAEGRPIWKPMHMQPVFRMNPFITREGIGR ARTNAYLEGSTLDAGMDIFDRGLCLPSDNKMTIEEQGQIIEIIKGCFK >gi|312954418|gb|AENW01000054.1| GENE 25 27688 - 28200 225 170 aa, chain - ## HITS:1 COG:no KEGG:Elen_1920 NR:ns ## KEGG: Elen_1920 # Name: not_defined # Def: NusG antitermination factor # Organism: E.lenta # Pathway: not_defined # 3 169 2 168 170 161 44.0 7e-39 MKWYVGQVRSGHERKIVEKCRTMISKDVLQDCFIPEYIRKKKYMGNWHDVKDILFKGYIF MITDQIDQLNIELKKIPDFVKVIGKKKADIFPLNEEEVAFMKSFGKENHVVEMSTGFIQG EQIFITEGPLQGKEGQIIRIDRHKRVAYLQLSMFNKETTTKVGLEIISKC >gi|312954418|gb|AENW01000054.1| GENE 26 28548 - 30443 713 631 aa, chain - ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 72 564 57 540 608 414 46.0 1e-115 MIEKIFNNSLYKNHREMMLCFFDLCIVFVSFLLAYWIKIEFRIPNFEKIYIRDFALAMLS VLLIYMSCFMLFKIHKSLWKYVGPIETLRIGLAVVLSTVVLFALAIIFELDRTFLSVIVT GGLLTALLMFNVRVCYRLYRRMTYKVTNKTEKAIIIGAGDAGYVLVKELAQNDNFNVSVI GFVDDKKINNEISGYRVLGDTYDIPEIVQKYDVKIAFIAMPSADKDTVRRIYDLCQSAKL ETKIMKEGDNLLVNELNSPKKYPVQDISIEDLLGRGEIKLEQNEIKSYLTDKVVVVTGAG GSIGSELCRQIVKFKPKQLMMVDINENSLYMLEQEFNRNRTHGILNKTIEIISLIASIRE FKAINGIFKEYNPDVVFHAAAHKHVPLMETRPMEAIKNNVFGTNNVINACIKNNVSRFIM ISTDKAVNPTNVMGATKRMTEMILQANGDNGVTKMAAVRFGNVLGSNGSVIPIFKQQITE GGPVTITDKNIIRYFMTIPEAAQLVLQAGFYADKGEIFVLDMGEPVKILDLAEKMIRLSG FKPYKDIDIIEIGLRPGEKMFEELKLDGETTTRTKNNLIFKNNVMAITKEDITDRLVKLE EILNDVEHRNDIKNRLLSLIITDQDQSVFMK >gi|312954418|gb|AENW01000054.1| GENE 27 31011 - 31250 127 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKRARELHKAVYAVAPDEKEKMPKKRESSGLLEDEIEYCNELSEVIDADSRMEVIETLR EQNNYLKEGVADTQIEIEY >gi|312954418|gb|AENW01000054.1| GENE 28 31247 - 31402 129 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLKDANLLEVLISTTIDIALKAGVMEAKVNLILDSTHTNASINISHLEKN >gi|312954418|gb|AENW01000054.1| GENE 29 31455 - 31748 131 97 aa, chain - ## HITS:1 COG:no KEGG:LCABL_14620 NR:ns ## KEGG: LCABL_14620 # Name: not_defined # Def: transposase IS4 family protein # Organism: L.casei_BL23 # Pathway: not_defined # 7 95 5 92 184 84 47.0 1e-15 MLGKVEQESMTISPYSELFDILIEKDDFWRVLNEMVDFGFIYDVVVKEKYSNSMGRPVEN PIVMVKYILLKSKFKLSDRDLIAHTRTDMLLQIFFRI >gi|312954418|gb|AENW01000054.1| GENE 30 31907 - 32305 110 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237733018|ref|ZP_04563499.1| ## NR: gi|237733018|ref|ZP_04563499.1| predicted protein [Mollicutes bacterium D7] # 8 125 43 162 175 99 50.0 6e-20 MIPTNLIEEKNIKERNEEYTIFVEYRDYFTKSFSFKTRSKKISVIIFLGILIVVALAHCI SIAVVVNRGFDVTTLVVFISASVSLITVLLVIPTKIIEFIFNRDEEKYSVEIIHNIQDYD KKVRDDFKALVS >gi|312954418|gb|AENW01000054.1| GENE 31 33108 - 34073 149 321 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260436992|ref|ZP_05790808.1| ## NR: gi|260436992|ref|ZP_05790808.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] # 13 138 20 143 1146 76 41.0 2e-12 MKYLTDWNAFKENGSFNGNLFEDLVKELLACMYPNVIWEQTKKSWDGNKDFVSKGLHSNE KWAECKCYKKKLDLKVLAPTLVMSTVSNIKDILIFSYSEINTNAKRKIAQFAESQEATII VYENEVLEELILKYQDVLNIEIYFPSFKKCTYTDLALQNQLSFLNSRIMKEQSWRELKKE RLRINDIIKITVTVCNSSLKSVDCSLEIKKYEKNMAMLTPSKIDSVLKGGEIKYYYFHMQ INHYDNLIKMPEVYLNKIKILSAFSITCDWLLEKPLIGCINECEKIKNVLNSSQNNNPHT FLITPDLDASLCNWIKLYMSF >gi|312954418|gb|AENW01000054.1| GENE 32 34220 - 35413 487 397 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 92 392 79 377 387 87 28.0 4e-17 MKEKRRDNKGRILHTGESQRTDGKYLYKYVDAFGNTKYVYAWRLTPTDPTPKGKREKPSL RELEQQIRRDIEDGIDSTGKKMTLCQLYAKQNAQRANVKKSTQKQREQLMRLLKEDKLGA RSIDTIKPSDAKEWALRMKDKGFSYNTINNHKRSLKASFYIAIQDDCVRKNPFDFKLSEV LENDTKEKVALTEEQEQALLSFIKTDNVYHKYYDDVLILLKTGLRISELCGLTMADIDFA NEVVVIDHQLLKSKEQGYYIETPKTKSGVRNVPLSKETIQAFHRVIKKRSKIRSMEIDGH KDFLFINSKGKPKVAIDYTTLFVRMVKKYNKHHKDRLLPHITPHTLRHTFCTRLASKNMN PKDLQYIMGHSNISITMNWYAHASIDTAKSEVQRLIA >gi|312954418|gb|AENW01000054.1| GENE 33 35492 - 35698 259 68 aa, chain - ## HITS:1 COG:no KEGG:SMU.1031 NR:ns ## KEGG: SMU.1031 # Name: xis # Def: putative transposon excisionase; Tn916 ORF1-like # Organism: S.mutans # Pathway: not_defined # 3 68 2 67 67 104 83.0 1e-21 MSNAQDIPVWEKYTLTIEEASKYFRIGENKLRRLAEENKDAGWLIMNGNRIQIKRRQFEQ VIDKLDAI >gi|312954418|gb|AENW01000054.1| GENE 34 35691 - 36833 848 380 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 63 372 25 351 352 145 30.0 2e-34 MNNLEFALEMKNKRLASGLSQGELASLTHVSRYSINRFENGKANASKETQNIILRCLNYY ICDKPFYLLVDYLSVRFPTTDALEIIRKVLGMKADYFIHYDYGYYGYKEHYAYGEIKVMA SDDEHMGVFLELKGAGSRNMEYVLQAQNRDWYSFLNRCLDCGGVIRRFDLAINDMCGLLD IPVLSEKYRNGGADCRCKNYENVQGGKLSGKNRNLASTLYIGSKASTKYFCLYEKQEEQA TKKKHTDIINRFEIRLRDKKAVQAVEELLLTYNPHGLVFYLITDFVEFPDYPLWEIFIAH DSSPFEMNPVPVNMERTLQWLERQVMPSIVMIEEIDRLTGSNYMKMIDECTHLSEKQEMI VEQMCTDIADVIESEGVFYE Prediction of potential genes in microbial genomes Time: Sat May 14 03:12:16 2011 Seq name: gi|312954416|gb|AENW01000055.1| Clostridium sp. HGF2 contig00053, whole genome shotgun sequence Length of sequence - 3659 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 610 - 3658 1120 ## CPF_1087 pullulanase family protein Predicted protein(s) >gi|312954416|gb|AENW01000055.1| GENE 1 610 - 3658 1120 1016 aa, chain + ## HITS:1 COG:no KEGG:CPF_1087 NR:ns ## KEGG: CPF_1087 # Name: not_defined # Def: pullulanase family protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 920 1004 2423 2507 2638 100 61.0 3e-19 MKQKLKRILACVLVLCMGFGVQSNLAFAQENVAYNTEDISDEADTMTDGTKDTDTTSKDD LNTKTEENVGDSQHSKYGLTDREVWEECNQCSKDNPHLISTTAELDKVRTHTHTEGNVTT ITGYFKLVNDIVFTDEDYQENGAFYNNGWGWTPIGHNNKTSYFSGDQFQGDFNGDDYAVK NIKIERPAGYWYNGLFAAPGDNAHIYNLKLEGFTIHADGAGALYGQSYATKKDSMLVENI TVDNSCITGISSAAKYSGIFAACIKGMHRNITISNSTYKSERGAWKGGFIASEILTGMLE NVTVTDCEMTPFAYTGMLMPGIGMDTVIKDVVIKDSTVNITHHAWSYLIFEDYRSNSIGL TPVISDVKIDVNIQGTTANLKGAKTTIPKLKNTDVSPIQMDNIDVHEVLTDKTTNSQSKV DFSVDTNVISIPSDAEKNIKAEERYIVSLNGGHIRPETVNEEGKLIADRSGYAFDGWYEN KELNGDSIEKLNYNTYYYAKWIELKDQSISMEYGSTKELPTVSGVTLSEWTSADESVAKV KNGEIKTVNAGKTTLTAKASTASGGTATFTVNVEVTPMRIIYGSPDETEDGRPYIVYSLN EDGTAPKISDILGFYPVKEKQGESGYEADTSKPKITLNPGMGADGDVEYTYVNDVSNNKI TTDTLPIHPTVDENGNPHSIRVEMKLKNPNYRFTTIGTNWQQGDTITLFVACYEEGMNEV DMYLEGESEPLKIFEEQVYEYTGQGVVPTTKDLTTLYTKGKNTSNTITKFTVHFHAVAED TKFAGSYIEQVTNDQLTKEALEKIAPRELGVYSFVINGYNKDTKTYSYVSRRYSIVKGKP TGNPVFDVIESGKSLLEVQLSGTMKNKIGETVAGTFTWEDGNQTVESGKAYKWTFTPDDT NHYEVVNGESIVCPIPMEELNAIPTINASDKTLTVGDTFNPLDGVTASDKEDGDITEKVE VLSNDVDTSKAGTYTVIYKVTDSKGASSTKTITVTVKGKDTQKPTIDDNKKPSATD Prediction of potential genes in microbial genomes Time: Sat May 14 03:13:25 2011 Seq name: gi|312954207|gb|AENW01000056.1| Clostridium sp. HGF2 contig00041, whole genome shotgun sequence Length of sequence - 206719 bp Number of predicted genes - 199, with homology - 180 Number of transcription units - 87, operones - 48 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 191 - 943 404 ## BT_1587 hypothetical protein - Term 1548 - 1600 9.6 2 2 Op 1 . - CDS 1625 - 2035 366 ## - Prom 2096 - 2155 3.3 3 2 Op 2 . - CDS 2323 - 2649 378 ## gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 - Prom 2776 - 2835 7.1 4 3 Op 1 . - CDS 3040 - 4140 925 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 5 3 Op 2 . - CDS 4152 - 4712 577 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 6 3 Op 3 . - CDS 4709 - 5014 168 ## 7 3 Op 4 . - CDS 5011 - 6066 1003 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 8 3 Op 5 9/0.000 - CDS 6100 - 6576 690 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 9 3 Op 6 . - CDS 6592 - 6990 465 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 10 3 Op 7 . - CDS 7005 - 7670 731 ## COG0036 Pentose-5-phosphate-3-epimerase - Term 7682 - 7736 6.7 11 4 Op 1 13/0.000 - CDS 7747 - 8583 1235 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 12 4 Op 2 . - CDS 8586 - 9332 926 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC + Prom 9648 - 9707 6.7 13 5 Tu 1 . + CDS 9727 - 10464 606 ## COG1737 Transcriptional regulators + Term 10467 - 10499 3.1 + Prom 10524 - 10583 2.3 14 6 Op 1 3/0.000 + CDS 10603 - 11658 883 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 15 6 Op 2 3/0.000 + CDS 11669 - 12538 971 ## COG0191 Fructose/tagatose bisphosphate aldolase 16 6 Op 3 . + CDS 12540 - 13568 674 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Term 13486 - 13514 0.3 17 7 Op 1 1/0.167 - CDS 13710 - 15143 1640 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 18 7 Op 2 5/0.000 - CDS 15157 - 16434 962 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 19 7 Op 3 . - CDS 16434 - 16997 473 ## COG3711 Transcriptional antiterminator 20 7 Op 4 . - CDS 17018 - 20179 2396 ## COG1001 Adenine deaminase 21 7 Op 5 10/0.000 - CDS 20182 - 21477 1177 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 22 7 Op 6 8/0.000 - CDS 21480 - 21782 270 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 23 7 Op 7 . - CDS 21789 - 22100 433 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Prom 22172 - 22231 5.5 - Term 22224 - 22274 -0.9 24 8 Op 1 . - CDS 22341 - 22988 664 ## COG0637 Predicted phosphatase/phosphohexomutase - Term 22998 - 23031 3.1 25 8 Op 2 . - CDS 23034 - 23348 412 ## gi|293399842|ref|ZP_06643988.1| putative cell-division initiation protein - Prom 23370 - 23429 5.5 26 9 Op 1 . - CDS 23747 - 24340 337 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 27 9 Op 2 3/0.000 - CDS 24337 - 25512 671 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 28 9 Op 3 7/0.000 - CDS 25509 - 27083 1410 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 27103 - 27162 2.5 - Term 27175 - 27222 0.0 29 9 Op 4 . - CDS 27241 - 28074 778 ## COG3711 Transcriptional antiterminator - Prom 28161 - 28220 7.7 + Prom 28489 - 28548 1.8 30 10 Tu 1 . + CDS 28576 - 29046 423 ## COG2190 Phosphotransferase system IIA components + Term 29093 - 29137 7.5 31 11 Op 1 . - CDS 29126 - 29467 345 ## gi|293399842|ref|ZP_06643988.1| putative cell-division initiation protein 32 11 Op 2 . - CDS 29397 - 29861 164 ## gi|293399843|ref|ZP_06643989.1| putative spore cortex biosynthesis protein YabQ 33 11 Op 3 . - CDS 29861 - 30163 438 ## BL00510 hypothetical protein - Prom 30187 - 30246 4.5 34 12 Op 1 . - CDS 30253 - 30543 487 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 35 12 Op 2 . - CDS 30573 - 31067 613 ## COG2002 Regulators of stationary/sporulation gene expression - Prom 31207 - 31266 10.6 + Prom 31205 - 31264 9.6 36 13 Tu 1 . + CDS 31319 - 31561 372 ## Dhaf_0506 transcriptional regulator, XRE family + Term 31576 - 31639 8.7 - Term 31573 - 31619 6.2 37 14 Tu 1 . - CDS 31639 - 32814 1488 ## COG0192 S-adenosylmethionine synthetase - Prom 32846 - 32905 6.5 38 15 Tu 1 . - CDS 33018 - 33608 577 ## - Prom 33681 - 33740 2.8 39 16 Op 1 7/0.000 - CDS 33827 - 37282 4145 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 40 16 Op 2 . - CDS 37293 - 37853 680 ## COG0193 Peptidyl-tRNA hydrolase - Prom 37980 - 38039 4.6 - Term 37903 - 37933 -0.1 41 17 Op 1 . - CDS 38049 - 38213 190 ## 42 17 Op 2 . - CDS 38254 - 39369 712 ## - Prom 39390 - 39449 2.0 - Term 39906 - 39943 -0.1 43 18 Op 1 1/0.167 - CDS 39989 - 40795 917 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 44 18 Op 2 . - CDS 40812 - 42173 1451 ## COG0371 Glycerol dehydrogenase and related enzymes 45 18 Op 3 3/0.000 - CDS 42183 - 43037 974 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 43073 - 43132 2.4 46 18 Op 4 1/0.167 - CDS 43140 - 44183 1144 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 44207 - 44266 6.9 - Term 44257 - 44296 5.0 47 19 Op 1 13/0.000 - CDS 44311 - 45150 1152 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 48 19 Op 2 13/0.000 - CDS 45152 - 45937 909 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 49 19 Op 3 9/0.000 - CDS 45984 - 46463 735 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 50 19 Op 4 . - CDS 46445 - 46885 416 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 47014 - 47073 2.9 51 20 Op 1 1/0.167 - CDS 47077 - 48534 962 ## COG1070 Sugar (pentulose and hexulose) kinases 52 20 Op 2 3/0.000 - CDS 48550 - 49395 896 ## COG0191 Fructose/tagatose bisphosphate aldolase 53 20 Op 3 . - CDS 49409 - 50452 849 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 50477 - 50536 4.4 54 21 Op 1 . + CDS 50753 - 52669 1703 ## COG3711 Transcriptional antiterminator 55 21 Op 2 . + CDS 52682 - 53350 638 ## gi|218283690|ref|ZP_03489651.1| hypothetical protein EUBIFOR_02245 56 21 Op 3 . + CDS 53353 - 54066 458 ## COG0036 Pentose-5-phosphate-3-epimerase 57 21 Op 4 . + CDS 54047 - 54514 366 ## gi|160914682|ref|ZP_02076896.1| hypothetical protein EUBDOL_00689 - Term 54867 - 54910 9.4 58 22 Op 1 . - CDS 54976 - 56166 929 ## COG1160 Predicted GTPases 59 22 Op 2 . - CDS 56168 - 57586 1559 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 60 22 Op 3 . - CDS 57565 - 58653 972 ## COG0502 Biotin synthase and related enzymes 61 22 Op 4 . - CDS 58646 - 58924 307 ## EUBREC_0233 hypothetical protein - Prom 59075 - 59134 5.7 - Term 59151 - 59195 4.4 62 23 Tu 1 . - CDS 59298 - 61400 1611 ## COG2199 FOG: GGDEF domain - Prom 61427 - 61486 4.0 - Term 61448 - 61487 7.4 63 24 Op 1 16/0.000 - CDS 61494 - 62108 657 ## COG1847 Predicted RNA-binding protein 64 24 Op 2 22/0.000 - CDS 62121 - 63116 1128 ## COG0706 Preprotein translocase subunit YidC 65 24 Op 3 . - CDS 63148 - 63474 318 ## COG0594 RNase P protein component - Prom 63546 - 63605 4.5 66 25 Tu 1 . - CDS 63663 - 63797 195 ## PROTEIN SUPPORTED gi|167755166|ref|ZP_02427293.1| hypothetical protein CLORAM_00671 - Prom 63847 - 63906 7.6 67 26 Tu 1 . - CDS 63912 - 64295 423 ## + Prom 64916 - 64975 4.2 68 27 Op 1 16/0.000 + CDS 64996 - 66354 1269 ## COG0593 ATPase involved in DNA replication initiation + Prom 66358 - 66417 6.8 69 27 Op 2 6/0.000 + CDS 66505 - 67623 1321 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Term 67630 - 67668 2.1 + Prom 67751 - 67810 8.2 70 28 Op 1 9/0.000 + CDS 67831 - 68034 244 ## COG2501 Uncharacterized conserved protein 71 28 Op 2 9/0.000 + CDS 68031 - 69131 908 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 72 28 Op 3 24/0.000 + CDS 69143 - 71086 2151 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 73 28 Op 4 2/0.056 + CDS 71103 - 73616 2804 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 73818 - 73859 5.0 + Prom 73645 - 73704 4.1 74 29 Tu 1 . + CDS 73874 - 75160 1102 ## COG0172 Seryl-tRNA synthetase + Prom 75946 - 76005 10.4 75 30 Op 1 2/0.056 + CDS 76109 - 76564 313 ## COG0590 Cytosine/adenosine deaminases + Term 76567 - 76610 1.2 + Prom 76566 - 76625 4.2 76 30 Op 2 30/0.000 + CDS 76659 - 78467 1109 ## COG2812 DNA polymerase III, gamma/tau subunits 77 30 Op 3 23/0.000 + CDS 78472 - 78780 411 ## COG0718 Uncharacterized protein conserved in bacteria 78 30 Op 4 . + CDS 78780 - 79376 396 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Prom 79602 - 79661 4.1 79 31 Tu 1 . + CDS 79681 - 80616 437 ## gi|160914824|ref|ZP_02077038.1| hypothetical protein EUBDOL_00832 - Term 80584 - 80618 3.2 80 32 Tu 1 . - CDS 80847 - 81404 467 ## COG4116 Uncharacterized protein conserved in bacteria - Prom 81426 - 81485 4.3 + Prom 81382 - 81441 5.5 81 33 Tu 1 . + CDS 81464 - 82237 651 ## COG0061 Predicted sugar kinase + Term 82332 - 82382 3.2 - Term 82475 - 82510 4.1 82 34 Tu 1 . - CDS 82512 - 83732 1110 ## COG0772 Bacterial cell division membrane protein - Prom 83771 - 83830 7.3 + Prom 83878 - 83937 5.2 83 35 Op 1 6/0.000 + CDS 83957 - 86488 2711 ## COG0249 Mismatch repair ATPase (MutS family) + Term 86491 - 86534 8.1 84 35 Op 2 12/0.000 + CDS 86549 - 88636 1789 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) + Term 88651 - 88696 4.4 + Prom 88663 - 88722 3.4 85 35 Op 3 . + CDS 88769 - 89680 845 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 86 35 Op 4 . + CDS 89682 - 90422 704 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 87 35 Op 5 . + CDS 90412 - 91191 796 ## COG0778 Nitroreductase 88 35 Op 6 . + CDS 91260 - 92075 250 ## + Term 92157 - 92203 4.1 + Prom 92129 - 92188 7.4 89 36 Op 1 . + CDS 92395 - 92733 384 ## COG1695 Predicted transcriptional regulators 90 36 Op 2 . + CDS 92711 - 93271 506 ## smi_0351 hypothetical protein + Term 93320 - 93362 1.1 91 37 Tu 1 . - CDS 93453 - 94103 608 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 94253 - 94312 5.8 + Prom 94757 - 94816 6.9 92 38 Op 1 22/0.000 + CDS 94840 - 95472 804 ## COG0125 Thymidylate kinase 93 38 Op 2 7/0.000 + CDS 95465 - 96442 1040 ## COG0470 ATPase involved in DNA replication 94 38 Op 3 . + CDS 96439 - 97509 1209 ## COG1774 Uncharacterized homolog of PSP1 95 38 Op 4 . + CDS 97519 - 98376 1095 ## COG0313 Predicted methyltransferases + Term 98433 - 98477 7.6 96 39 Op 1 . + CDS 98486 - 99181 624 ## Cbei_2690 GCN5-related N-acetyltransferase 97 39 Op 2 40/0.000 + CDS 99246 - 99926 944 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 98 39 Op 3 . + CDS 99910 - 101553 1730 ## COG0642 Signal transduction histidine kinase + Term 101694 - 101744 6.9 + Prom 101789 - 101848 7.7 99 40 Op 1 12/0.000 + CDS 101953 - 104298 2705 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 100 40 Op 2 . + CDS 104291 - 104839 726 ## COG0602 Organic radical activating enzymes + Term 104966 - 105002 2.5 101 41 Op 1 . + CDS 105321 - 105809 613 ## COG1396 Predicted transcriptional regulators 102 41 Op 2 . + CDS 105811 - 106062 170 ## - Term 106126 - 106162 3.4 103 42 Op 1 7/0.000 - CDS 106219 - 106662 350 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 104 42 Op 2 7/0.000 - CDS 106666 - 107703 1213 ## COG1299 Phosphotransferase system, fructose-specific IIC component 105 42 Op 3 1/0.167 - CDS 107724 - 108038 474 ## COG1445 Phosphotransferase system fructose-specific component IIB 106 42 Op 4 . - CDS 108053 - 110695 2101 ## COG0383 Alpha-mannosidase - Prom 110787 - 110846 2.7 + Prom 110618 - 110677 2.9 107 43 Op 1 . + CDS 110838 - 110987 74 ## 108 43 Op 2 . + CDS 111030 - 112973 1078 ## COG3711 Transcriptional antiterminator 109 43 Op 3 . + CDS 113038 - 113406 471 ## Patl_3900 hypothetical protein + Term 113470 - 113517 1.1 - Term 113465 - 113498 1.4 110 44 Op 1 . - CDS 113504 - 115279 219 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 115304 - 115363 7.2 - Term 115373 - 115404 0.2 111 44 Op 2 . - CDS 115455 - 115949 317 ## - Prom 116036 - 116095 7.8 + Prom 115976 - 116035 3.4 112 45 Tu 1 . + CDS 116115 - 116882 612 ## COG1072 Panthothenate kinase 113 46 Tu 1 . - CDS 116836 - 117600 630 ## ACL_1027 integral membrane protein - Prom 117812 - 117871 4.8 - Term 117872 - 117924 1.5 114 47 Op 1 . - CDS 117930 - 118871 568 ## COG1266 Predicted metal-dependent membrane protease 115 47 Op 2 6/0.000 - CDS 118883 - 119731 1082 ## COG0287 Prephenate dehydrogenase 116 47 Op 3 . - CDS 119728 - 120990 1173 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 117 47 Op 4 . - CDS 120991 - 122007 1151 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 118 47 Op 5 7/0.000 - CDS 122051 - 123148 1140 ## COG0082 Chorismate synthase 119 47 Op 6 . - CDS 123145 - 124158 1461 ## COG0337 3-dehydroquinate synthetase - Prom 124325 - 124384 6.3 + Prom 124529 - 124588 5.2 120 48 Op 1 . + CDS 124616 - 125701 1106 ## COG0077 Prephenate dehydratase 121 48 Op 2 . + CDS 125704 - 126939 1272 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 126970 - 127004 3.5 + Prom 127358 - 127417 5.7 122 49 Tu 1 . + CDS 127543 - 128466 822 ## CA_C2550 hypothetical protein + Prom 128526 - 128585 4.5 123 50 Tu 1 . + CDS 128633 - 128875 58 ## + Prom 128886 - 128945 3.1 124 51 Tu 1 . + CDS 128976 - 129194 146 ## + Prom 130010 - 130069 9.0 125 52 Op 1 1/0.167 + CDS 130188 - 130688 535 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 126 52 Op 2 . + CDS 130706 - 134401 4262 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 127 52 Op 3 . + CDS 134480 - 136075 1944 ## COG2268 Uncharacterized protein conserved in bacteria 128 52 Op 4 21/0.000 + CDS 136097 - 137128 773 ## PROTEIN SUPPORTED gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 129 52 Op 5 10/0.000 + CDS 137122 - 137709 675 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 130 52 Op 6 . + CDS 137709 - 139241 1715 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Term 139717 - 139747 1.2 131 53 Op 1 . - CDS 139797 - 140489 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 132 53 Op 2 . - CDS 140483 - 141235 419 ## gi|160914973|ref|ZP_02077187.1| hypothetical protein EUBDOL_00981 133 53 Op 3 . - CDS 141242 - 142468 908 ## gi|160914974|ref|ZP_02077188.1| hypothetical protein EUBDOL_00982 134 53 Op 4 . - CDS 142465 - 143181 501 ## gi|160914975|ref|ZP_02077189.1| hypothetical protein EUBDOL_00983 135 53 Op 5 . - CDS 143233 - 143604 518 ## COG1725 Predicted transcriptional regulators - Prom 143625 - 143684 5.6 - Term 143651 - 143686 1.3 136 53 Op 6 . - CDS 143702 - 144028 378 ## - Prom 144119 - 144178 5.7 137 54 Op 1 1/0.167 + CDS 144603 - 145166 522 ## COG4732 Predicted membrane protein 138 54 Op 2 6/0.000 + CDS 145117 - 145926 857 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 139 54 Op 3 . + CDS 145923 - 146552 790 ## COG0352 Thiamine monophosphate synthase + Term 146576 - 146625 1.4 140 55 Tu 1 . - CDS 147189 - 147464 282 ## - Prom 147518 - 147577 4.4 141 56 Op 1 . - CDS 147682 - 148362 258 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 142 56 Op 2 . - CDS 148377 - 149432 402 ## Teth39_0940 hypothetical protein 143 56 Op 3 . - CDS 149425 - 150405 514 ## - Prom 150490 - 150549 8.4 144 57 Tu 1 . - CDS 150632 - 151153 301 ## gi|218283731|ref|ZP_03489675.1| hypothetical protein EUBIFOR_02269 - Prom 151196 - 151255 6.8 + Prom 151259 - 151318 4.2 145 58 Tu 1 . + CDS 151347 - 152051 412 ## COG3279 Response regulator of the LytR/AlgR family + Prom 152060 - 152119 6.8 146 59 Op 1 . + CDS 152140 - 152715 280 ## 147 59 Op 2 . + CDS 152749 - 154074 694 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain + Term 154076 - 154106 0.3 + Prom 154083 - 154142 2.4 148 59 Op 3 . + CDS 154165 - 154833 61 ## + Prom 154836 - 154895 6.3 149 60 Tu 1 . + CDS 154992 - 156635 1721 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase + Prom 156715 - 156774 6.3 150 61 Tu 1 . + CDS 156941 - 157090 82 ## - Term 157106 - 157145 1.1 151 62 Tu 1 . - CDS 157261 - 158916 2061 ## COG4805 Uncharacterized protein conserved in bacteria + Prom 158963 - 159022 4.4 152 63 Tu 1 . + CDS 159219 - 159971 726 ## COG1349 Transcriptional regulators of sugar metabolism + Term 160185 - 160215 2.0 153 64 Tu 1 . - CDS 159990 - 160886 741 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 160999 - 161058 6.9 + Prom 160888 - 160947 10.8 154 65 Tu 1 . + CDS 161078 - 163489 2143 ## COG1882 Pyruvate-formate lyase + Term 163528 - 163577 4.1 - Term 163515 - 163564 -0.8 155 66 Tu 1 . - CDS 163569 - 164942 1397 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 165069 - 165128 6.2 - Term 165142 - 165194 6.1 156 67 Tu 1 . - CDS 165238 - 166200 880 ## WPa_0291 hypothetical protein - Prom 166319 - 166378 5.5 + Prom 166344 - 166403 3.8 157 68 Tu 1 . + CDS 166471 - 166851 402 ## gi|293400119|ref|ZP_06644265.1| multidrug resistance protein B + Term 166860 - 166905 3.1 + Prom 166900 - 166959 2.9 158 69 Op 1 . + CDS 166988 - 167416 434 ## Elen_0703 response regulator receiver protein 159 69 Op 2 . + CDS 167421 - 167894 473 ## gi|296443279|ref|ZP_06885328.1| hypothetical protein CloleDRAFT_3415 160 69 Op 3 . + CDS 167891 - 168733 330 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 161 69 Op 4 . + CDS 168735 - 169439 669 ## Cphy_3597 ABC-2 type transporter + Term 169444 - 169491 10.8 - Term 169434 - 169476 4.8 162 70 Tu 1 . - CDS 169525 - 171363 1466 ## COG3711 Transcriptional antiterminator - Prom 171399 - 171458 4.9 + Prom 171360 - 171419 4.6 163 71 Op 1 10/0.000 + CDS 171566 - 171880 391 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 164 71 Op 2 13/0.000 + CDS 171906 - 173165 952 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 165 71 Op 3 2/0.056 + CDS 173185 - 173532 448 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 166 71 Op 4 . + CDS 173543 - 174988 1409 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 175007 - 175053 8.1 + Prom 174990 - 175049 6.7 167 72 Op 1 . + CDS 175183 - 176058 1101 ## COG1284 Uncharacterized conserved protein 168 72 Op 2 . + CDS 176094 - 176909 920 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 169 72 Op 3 . + CDS 176911 - 177660 751 ## COG0778 Nitroreductase + Prom 178144 - 178203 3.8 170 73 Op 1 36/0.000 + CDS 178236 - 179594 1157 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 171 73 Op 2 . + CDS 179606 - 180061 276 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component + Term 180271 - 180314 8.3 172 74 Tu 1 . - CDS 180058 - 180531 252 ## gi|295099889|emb|CBK88978.1| Predicted hydrolases of the HAD superfamily - Prom 180763 - 180822 5.0 + Prom 180513 - 180572 6.1 173 75 Tu 1 . + CDS 180770 - 182359 1737 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 182487 - 182546 7.7 174 76 Tu 1 . + CDS 182735 - 183553 905 ## gi|293400212|ref|ZP_06644358.1| hypothetical protein HMPREF0863_00495 + Term 183560 - 183600 4.1 + Prom 183588 - 183647 5.3 175 77 Op 1 . + CDS 183671 - 184216 730 ## COG1658 Small primase-like proteins (Toprim domain) 176 77 Op 2 . + CDS 184209 - 184799 554 ## gi|293399848|ref|ZP_06643994.1| conserved hypothetical protein 177 77 Op 3 6/0.000 + CDS 184813 - 185688 829 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 178 77 Op 4 . + CDS 185660 - 186499 742 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 179 78 Tu 1 . - CDS 186668 - 187498 498 ## Ldb0071 glycosyl transferase - Prom 187548 - 187607 4.3 + Prom 187570 - 187629 3.5 180 79 Op 1 40/0.000 + CDS 187651 - 188340 806 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 181 79 Op 2 . + CDS 188333 - 189676 1320 ## COG0642 Signal transduction histidine kinase - Term 189845 - 189880 4.2 182 80 Tu 1 . - CDS 189894 - 190670 841 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 190919 - 190978 6.8 + Prom 190779 - 190838 4.3 183 81 Op 1 11/0.000 + CDS 190948 - 192303 1464 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 184 81 Op 2 . + CDS 192327 - 193280 994 ## COG0462 Phosphoribosylpyrophosphate synthetase 185 81 Op 3 . + CDS 193303 - 193659 451 ## CLH_2672 hypothetical protein + Term 193663 - 193707 9.0 - Term 194250 - 194284 4.0 186 82 Op 1 2/0.056 - CDS 194294 - 195943 1370 ## COG0366 Glycosidases 187 82 Op 2 3/0.000 - CDS 195953 - 196624 420 ## COG2190 Phosphotransferase system IIA components 188 82 Op 3 . - CDS 196724 - 197854 1023 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 197875 - 197934 7.3 - Term 197981 - 198013 3.1 189 83 Op 1 . - CDS 198020 - 198736 805 ## COG2188 Transcriptional regulators 190 83 Op 2 . - CDS 198804 - 199307 386 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 191 83 Op 3 . - CDS 199320 - 200084 919 ## gi|293400087|ref|ZP_06644233.1| hypothetical protein HMPREF0863_00370 - Prom 200223 - 200282 4.9 + Prom 200097 - 200156 4.7 192 84 Op 1 . + CDS 200204 - 200968 908 ## COG0726 Predicted xylanase/chitin deacetylase 193 84 Op 2 . + CDS 201019 - 201789 636 ## COG2771 DNA-binding HTH domain-containing proteins + Prom 201804 - 201863 3.7 194 84 Op 3 . + CDS 201889 - 202248 433 ## TDE1368 hypothetical protein + Prom 202291 - 202350 5.0 195 85 Tu 1 . + CDS 202449 - 202703 265 ## + Term 202707 - 202747 4.5 + Prom 202705 - 202764 2.5 196 86 Op 1 4/0.000 + CDS 202784 - 204115 1433 ## COG0486 Predicted GTPase 197 86 Op 2 . + CDS 204134 - 204901 767 ## COG0084 Mg-dependent DNase + Term 205069 - 205108 7.7 - TRNA 205372 - 205448 85.2 # Pro CGG 0 0 - Term 205327 - 205363 0.9 198 87 Op 1 . - CDS 205519 - 205881 483 ## COG1321 Mn-dependent transcriptional regulator 199 87 Op 2 . - CDS 205925 - 206284 485 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 206304 - 206363 5.5 Predicted protein(s) >gi|312954207|gb|AENW01000056.1| GENE 1 191 - 943 404 250 aa, chain - ## HITS:1 COG:no KEGG:BT_1587 NR:ns ## KEGG: BT_1587 # Name: not_defined # Def: hypothetical protein # Organism: B.thetaiotaomicron # Pathway: not_defined # 1 250 1 250 250 389 68.0 1e-107 MKNDFINLTEENVSDEHLCCIIRSRKPHSGISAKREWLSDRLKEGHVFRKLNVKGTVFIE YAPLETAWVPIEGSRYYYIYCLWATGEYKGKGYGKQLLEYCIADAKANGKSGICVLGAKK QKAWLTDQSFLKRYGFQVVDTTESGYELLALSFDGTFPQLCEAAKKERITNQDLTVFYDM QCPYILKNVDIVRQYCEKHDIPVAFHLVDTLEKAKAVPCVFNNWAVFYKGSFQTVNLLLD IAALKRIVKK >gi|312954207|gb|AENW01000056.1| GENE 2 1625 - 2035 366 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAVMVYPQVEAFQNGKEDREAQNPVKTCEQKLLELLKVLFIKDFSVEKKKERLEKEDGI MMKRETESEVMEMCNFSDFIEERGIKKGLEQGKVNTTVQHVQNLMQFSNLSADEAMKMLG VEKELQSVILNKLHQA >gi|312954207|gb|AENW01000056.1| GENE 3 2323 - 2649 378 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914792|ref|ZP_02077006.1| ## NR: gi|160914792|ref|ZP_02077006.1| hypothetical protein EUBDOL_00799 [Eubacterium dolichum DSM 3991] # 1 101 1 105 323 82 44.0 7e-15 MRETTRIASAITKNENKKVYDEYYKRILSNKQILACVMKGCIPEYEDTPLEEIPAYIELS ATESEMIDEKSIEVVDEAIPGSQIKYDIQFEAALLCKYKAEGSEEKRP >gi|312954207|gb|AENW01000056.1| GENE 4 3040 - 4140 925 366 aa, chain - ## HITS:1 COG:lin0506 KEGG:ns NR:ns ## COG: lin0506 COG1063 # Protein_GI_number: 16799581 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Listeria innocua # 5 350 1 347 348 246 37.0 8e-65 MEGKMKAAVLHGINDLRIEEVEIPRLDEHDVLVRVSACGVCGSDLPRILTQGTYHFPTIP GHEFGGEVVAIGSCVKQNLLHKNVAVIPLIPCRTCKSCEVGDFAQCENYDFLGSRSDGGF AEYVKVPEENLVIMPDQVKPETAAFLEPISVALHVVSNTGVNFGDDVVVFGLGAIGIFVA QWAKAFGASHVFAVDLDPKKVEIARQLGLTDAVCGSIEEVREIVEKATSRAGCDVVFEAS GAPVVFNQAMQLLKQNGRFGPVGRPVRDLTVSVKTYETILRRQLTIKGTWSFEFKRFPHN AWDISLEALQKGIIQTDAIISHRFPLAKTKDAVDLMAEKKEFFYKILIVPNEGTLNIKHI HDKNAS >gi|312954207|gb|AENW01000056.1| GENE 5 4152 - 4712 577 186 aa, chain - ## HITS:1 COG:BS_yckF KEGG:ns NR:ns ## COG: BS_yckF COG0794 # Protein_GI_number: 16077414 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Bacillus subtilis # 1 186 1 185 185 110 36.0 1e-24 MKYREARDTVLQELQTVFTYVKEDEVVALAEAICEAETVFVVGVGRVLLMLQAFVKRLNH LGIEATYVGAIDEPAITEHDLLLVGSGSGESVVPLAIVKIAQRYHAKIAHIGSNASSSMT PYENIFIRIPCSTKLQLEDEISSSQVMSSLFEQSLLLLADMVALLIVDRKQISDLHALWK KHANLE >gi|312954207|gb|AENW01000056.1| GENE 6 4709 - 5014 168 101 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMQSRKSIDFVQFIQDHEGEIFGKKRRITGQSYCSTYRKQIAALDMKLNEFISRDDARAK DITFLLGLFAFSISQFSVQIKTDVNRYEAAFYALFEEGDVQ >gi|312954207|gb|AENW01000056.1| GENE 7 5011 - 6066 1003 351 aa, chain - ## HITS:1 COG:SMb20853 KEGG:ns NR:ns ## COG: SMb20853 COG1063 # Protein_GI_number: 16264894 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 1 345 1 337 339 234 35.0 2e-61 MKVMRLHAINDFRLEEIETPVPKGDEILVRIGACGICGSDIPRVYQLGTRVYPVVIGHEF SGTVCAVGNPKDEALIGKKAAIFPLIPCRECEPCEIGQFCQCENYDYLGSRSNGGFAEYC LLPSRWHLVLAQDENIDLEALSMCEPACVAQHALRRGNVTAGQTIAILGAGPIGIMTARW ASLFGASQIILTDIDEAKQKFAQERGFTVINSRKENLKERIDVITNGRGVDVVIEGTGCS AGINDAIQIVRVGGTIVWLGNPHADTTIQLNVHSLLLRKELEMHGVWNSFYAQTPINEWE YTVQMIEEGKLEVSDLITHRAGLKDLKQLFDDIHNHSVTICKALYSAALDV >gi|312954207|gb|AENW01000056.1| GENE 8 6100 - 6576 690 158 aa, chain - ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 7 158 9 162 162 110 38.0 7e-25 MENLLLVRIDDRLIHGQVMTAWMKTLPAKQIIVIDDKVAKDDFMLFVLQNAAPSGIKVIA LTEEEALHKLQSGLDTPSFVLAKSPLSLKKLVDGGIEIKAVNIGGMGMKAGRTTVYKNVS ATDEERQCIKDFLDRGIDVAIQIIPSEKRFELNNILAK >gi|312954207|gb|AENW01000056.1| GENE 9 6592 - 6990 465 132 aa, chain - ## HITS:1 COG:CAP0066_1 KEGG:ns NR:ns ## COG: CAP0066_1 COG2893 # Protein_GI_number: 15004770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 124 1 126 157 78 38.0 3e-15 MVGIVIASHGVFCEGLKSSTEMIGGTIAQCTAVALQPGEDPDAYGERLCKAVDQMDDGHG VLMLIDLRGGTPFNRSIMLTREKHIMLTVGANLPMLLSVALGRHEDSTLEELAALAEKEA KESIGTICFNRQ >gi|312954207|gb|AENW01000056.1| GENE 10 7005 - 7670 731 221 aa, chain - ## HITS:1 COG:DR1401_2 KEGG:ns NR:ns ## COG: DR1401_2 COG0036 # Protein_GI_number: 15806418 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Deinococcus radiodurans # 3 199 1 195 214 158 38.0 9e-39 MDIKISPSIMCCKVEEYKPYLELFEKVQLDSVHFDIMDGAYVKNVMLGTPIYKDIKRLSK LPVDVHIMSYRPEEYMEYYDIQPGDRISFHPETTAQPYKLLQTIRDKGCKAGLVLNPGTP VSYLEECMDLLDYVTLMTVNPGFAGQKMVPDAPQKIRRVRQLLDAYEKEIDIVVDGNTTI ENSRLMRDAGANAFVVGTSSIIRSLDTFEEMYNAYVQELEK >gi|312954207|gb|AENW01000056.1| GENE 11 7747 - 8583 1235 278 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 11 274 16 278 278 179 40.0 4e-45 MSNAVMNKKELSKKDLVKAWALVYSSETCYNYERLQALGNTNMMMSVVKKLYDTKEEQVE ALKTYMEFFNTEPSWIGTVIHGITVSMEEQKANGADISGEDINALRTGLMGPMAGIGDTV SQAVVYPILAGICCSLALDGNFAGPILFEVVYKVLMIGCGYTCFMLGYKQGKQAIFKLLQ SGTLNKITEAFSIIGLTVVGNMAYSRINVICPAKFRVGEVKIVVQDIFNQLLPGAIPLII ALFVWWMVKKKMNPTLIIAVIFVIGIAASLLGLLSVAA >gi|312954207|gb|AENW01000056.1| GENE 12 8586 - 9332 926 248 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 14 233 11 236 249 119 32.0 5e-27 MLIKAILVALLATGSQWWFSHLITRTWLYPIWSGFLTGVIMGEPVLGMQAAAYIQLTYLG WITAGGSMPGNLMVAGIYGTALTVLSGADPKLAVSFAVTLSLLGILINQAYMTLNSVWVH RADKYLEEGNLKGVRLMNYVPSGILSFVLYGIPVMLMILYGAQWAQDTLAMIPQWLVDAL NLVGAIMPALGIAMLLNYLGKKKLIAFFFFGFFATVYLKLDTMSLFIFSAVIAAVMYFFS RDREEGGA >gi|312954207|gb|AENW01000056.1| GENE 13 9727 - 10464 606 245 aa, chain + ## HITS:1 COG:L47971 KEGG:ns NR:ns ## COG: L47971 COG1737 # Protein_GI_number: 15673967 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 12 245 3 239 244 115 32.0 8e-26 MIIQISKEVYDSLSDSEQQVINYLNENESSIPLMSITTIAEKTFTSPATVSRTIQKCGFR GISELRYKISKRAEHTDDSYVVNKVLNKSYKECVKTIDNICVTNILKIIDYIKTAEKIFI YARGFTALVADELCMQLQLLGYNALVVKDVTWMVKTDKLVNSNDLVIILSVMNTTPELAI SARMAKRTGARVVTCCCKEGTPLERYSDVSIIGYAETITSNKTITVISRIPLYIITRTIV EYLTL >gi|312954207|gb|AENW01000056.1| GENE 14 10603 - 11658 883 351 aa, chain + ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 1 332 15 352 371 132 27.0 1e-30 MKKEMRCAVFTGQRAVELQRFPIPEVDDDKLLVKIEACGICTWEQRVFTGSINTDYPLIG GHEVAGRIEAIGKDVHGDWEVGQRVIVGVTLPCRSCYFCKTHEEQSCQNFNTAQVLSGQP YPGTGGFSEYMMAVPYSVFPYTNVTPQEACICEPVSCVIHSVETVNPQFGDACVIIGAGI MGLLHTQLCVKKGCFVIVVDMNEERLEMAASMGAHYTINPHKEHAEKRIMKITHGRKARA VFDTTPAASVVEEACRYVGNMGKLMIYSGIYPNKPVQMDAHWIHKGSIQILGTANSNDRD FMRAACMISEGIIDVKPFISGVYPVEEVSSALASSCQGNTFRNIITFSEEL >gi|312954207|gb|AENW01000056.1| GENE 15 11669 - 12538 971 289 aa, chain + ## HITS:1 COG:Z5687 KEGG:ns NR:ns ## COG: Z5687 COG0191 # Protein_GI_number: 15804678 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 2 284 3 281 286 187 37.0 2e-47 MLVTTKELLCIANAENKAIGAFNITGLETLQAVLQAAESKKEPVILQFAQVHEEEHIMSL DIIGPIMIMMADQATVPVAVHLDHGVDLHILKKALDMGFTSIMYDGSSLPYGENIAYTRM AVSMAKEYGASVEAEIGQMAGVTLNDQKITENRKIDRSMFTDPLIAQDFVEKTGVDCLAC AFGTVHGLYATKPCLDYELVKELDAAIGVPIVMHGGSGVSEADYDIVIENGVRKVNYYTY MAKSGGEAAREYAAASEPVYFHDLANAAIAAMCSNVEEALRIFAHHKEQ >gi|312954207|gb|AENW01000056.1| GENE 16 12540 - 13568 674 342 aa, chain + ## HITS:1 COG:SMc01214 KEGG:ns NR:ns ## COG: SMc01214 COG1063 # Protein_GI_number: 15965330 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Sinorhizobium meliloti # 8 340 10 344 347 208 38.0 1e-53 MRAAVYFGRHDVRIIDFQEPPLTDTGVKVAVSYCGLCGTDLHKYDGLGGSRPVIPPVVLG HEASGIVVETGRNVSGIHIGDRVCVDPNWSCGHCTYCQAGMPHMCENSRGVVKGFAEYIC PPQENVYPLPDTLSLKHAALAEPLSCCLHGMDLLDVHLGDHVLIVGMGAIGSMMVQLCRL AGAAQIVVVEPQSEKKELAEALGATMFLSPDDDVKGILQKQQLHINRVMECVGLKTTIEN AFQYAGKCATVVLFGLGDPQQPAAFNQYSAFQKELTIKTSFVNPHTTQRAINLLACGAID CDAIISKILELEEIVEELQTRKWFRKGKVLVCIQPHTEAIVD >gi|312954207|gb|AENW01000056.1| GENE 17 13710 - 15143 1640 477 aa, chain - ## HITS:1 COG:BH0596 KEGG:ns NR:ns ## COG: BH0596 COG2723 # Protein_GI_number: 15613159 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus halodurans # 7 472 6 476 477 546 54.0 1e-155 MKKDKQFPEGFLWGGATSAYQFEGAWNEDGKGVNIVDILPHGSREAVPKDHKILPDVFYP SHGGIDFYHTYKEDIRLFKEMGMKCFRMSIAWTRIYPTGVEEEPNEKGLQFYDNVIDELL KNDIEPLITISHDEFPLHLVEAYGGWRNRILIDLYVKYAKTLFERYKGKVKYWITFNEIN FCSVIPWYAAGLEFEEGEHKEQIMFQAAHHQMVASALTVKLARSIDPEMKIGCMINAIPS YANTCKPEDVMESIEANHEIFLYTDVCVRGAYPSYANRFFEEKGVKIVMEDGDAAVLAQG CVDFCSFSYYYSRVTPLNPEKVSDLTEDERMLGVLRNPYLKASDWGWVIDPVGLRIILNQ LYERYQIPLMIVENGLGAHDELVDGKIHDDYRIEYFKNHLIQVREAIKDGVDVMGYTSWG CIDITAASTGQMSKRYGFIYVDINDDGSGSKKRYKKDSFAWYKRVMESNGEEGLDES >gi|312954207|gb|AENW01000056.1| GENE 18 15157 - 16434 962 425 aa, chain - ## HITS:1 COG:lin0325_2 KEGG:ns NR:ns ## COG: lin0325_2 COG1762 # Protein_GI_number: 16799402 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 288 422 1 123 143 92 35.0 2e-18 MEFIHRQQLAVSDFNLFSILLHMLMYISNTSYICMEEERASICDQGCRPLLEAIRERMRI QFTAEGTQQICALFKKRNAGQDDVRVMQFLHEVLREIYDIYSINFTENQDLMDNLALHLQ NLRNRCKHGMLIKNPLLSELKQSFVLIYDIAAYIAIRFQEQTGYVLDENEISFIALHIMN GIKSIKTSIVRIALINPYGNSVTHIIQQRLQALTDVEMIGCFSMFDFKALYTEKPDIIVT MVSTSEQMGVPVFQLDNYLQDEEYEKIERIVKSVRVKKSYENIMIHNYFKEDLFCIPSQL TTKDEVITYLCSLLEEQGYVDADFQEQIYEREAIAPTCFGARYAIPHTTKKTAKKNGIAV ALLRKPVIWDGFEVNIVLMFALHKSFDQVPKLYDLILNVFDDPVRFAQVLECDSYTAFMK KIHIT >gi|312954207|gb|AENW01000056.1| GENE 19 16434 - 16997 473 187 aa, chain - ## HITS:1 COG:lin0325_1 KEGG:ns NR:ns ## COG: lin0325_1 COG3711 # Protein_GI_number: 16799402 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 3 172 1 169 480 87 31.0 9e-18 MEISLSKRQMKMVDILLKESEYCTAATLANLLKVSEKTIHGEIAEINRKSKACMISSLKG KGYVVRDKDAWIRQNYIVGDEGRRDIKILKEILFNEHVDYYELADRFYISPSTLNKDIRI LNERIQKEFRTLRITRKQNHLFLNCDDIEKRRVLTYFLLEESEDQRFDVGNWIVILKMWM SIGFLRY >gi|312954207|gb|AENW01000056.1| GENE 20 17018 - 20179 2396 1053 aa, chain - ## HITS:1 COG:BH0640 KEGG:ns NR:ns ## COG: BH0640 COG1001 # Protein_GI_number: 15613203 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Bacillus halodurans # 10 576 6 566 585 322 34.0 3e-87 MLAFQPKDTKRLIAAALGNVENDLAIEGCRIFNVFTKEFLEATVYICDGFISHVEYNKKN SALPSKQRLQLNGILCPGFIDAHTHIESSLLVPEHYAAMVLPHGTTTVLEDAHEIANVMG VEGIQYMLAASQDLPMRMLLTLPSCVPSLPGFESSNAELFAKDYTALFQHPRVAGLGEVM DYEGVLQGEQRIHDLLLAAKKHAGYLQGHAPLMEGNRLSAYVNAGPQSDHEVKTKQEALD KYRKGMWIDIREANTQGRMKEILDVCKEFNDYSRICFCTDDRRCNVTGKYGHLDHVVRKA VSLGMPVEEALLSASYRVAQESGCKHLGAIAPGYAADLVLLNNVEDLQVHAVFFEGKLVS KKEQLTSPIVLSSYTRELNSRNTIQMQALKQEDFLIKAKGPYAQLNILSFASEYIATSHL KTRICPIQDGRVLLQKDKKQMYAAVFNRYGRTQRAVCIVENFGIDHGAVASSISHDSHNV CVVYDTPENGYLAVQEVMNMHGGFCAVSQGNILASLALPVAGLMSTECMETVSQNVELMA EAFHKLGNSYLENPVSRITILNLLVCPYVKLSDHGLVMTEEKKIIPVVKKEGITMDQRYE NVVLDKIPFPKEETGEPVLLSDETMQERRQKILHRMQEKKLDCIAVYADVEHGGNFEYLT GFIPRFEEALLILHKNEDAYLLLGNEVLSLSKHARIPAKGLHMSYFSLPDQPLQEEEDLK SVLAKAGVKNGMHLGVVGWKGFYRLQKELFDIPYYILEALKACEVKISNATDIFISPKDG ARTVNNANEIAHYEYGQILAARGLQRAMLALEPGKTEAEIGGLLESEGQIHNVVTICSSG TRFEKANLYTMNKPIQTGERISLTVGYKGGLASRAAFAAYKREDLDSAVRDYEEKIAKPY FSAVCTWLEHLHIGMEGKEVYALVDDILPKDIFCWKLNPGHLTADEEWLSSPIYEGSRLK LKSGMLLQIDIIPSVEGYPGCCCENGVVLADTVLKEEIKKQYPNSWERMLERRTYIQDVL GIQLHEDILPLSSMVAYYTPYLMNHDYAFTWKQ >gi|312954207|gb|AENW01000056.1| GENE 21 20182 - 21477 1177 431 aa, chain - ## HITS:1 COG:lin0326 KEGG:ns NR:ns ## COG: lin0326 COG1455 # Protein_GI_number: 16799403 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 3 428 5 430 437 363 47.0 1e-100 MESMKDRIEAKVLEFSGKLSTQIHLLALRNTFMTILPIMVFGGLSAVISAAPVTKETTNG FLLAWAGFVADYSYVFSWISVLSLGFITLYVALGITHYLCKNYKIEELIPNFITVFGVFM LAVRIEKLQYGLSLTDLNFLDGKGLLVGIFVSIVTVEIYRFLKSKNFGRIKLPDSVPASL SETFASLSIAILIMSLYLVMFIIFHNMDTTFAMWLSSVIAPQIKATDSLWFILLMTFIIN AAWFFGIHNATFWGLMGPIMMMNISENAAQLAAGIAPTAILTEAFWVYFICIGGVGSCLS LAIILCFSKSKLLKVVGKVGIIPAFFGISEPITFGLPIMLNPIFFIPCSLVSVVNAVIAF LCLNTGLIGKTYAMLSFNMPSIFGAYFSTGDFKAVILVAVLIVIDMLLYFPFMKMYEKQQ LLIEQQDEMQE >gi|312954207|gb|AENW01000056.1| GENE 22 21480 - 21782 270 100 aa, chain - ## HITS:1 COG:lin0327 KEGG:ns NR:ns ## COG: lin0327 COG1440 # Protein_GI_number: 16799404 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 96 1 94 96 92 47.0 2e-19 MLKIILVCNNGMSTAMMAKKMNEKSDGYCYVEAYGDGDFMNYLEGCDLILVGPQIRHEIP RIKKFVDASVPVVSMNPSHYGLMNAKGVIDDVKKIMKERK >gi|312954207|gb|AENW01000056.1| GENE 23 21789 - 22100 433 103 aa, chain - ## HITS:1 COG:SP2024 KEGG:ns NR:ns ## COG: SP2024 COG1447 # Protein_GI_number: 15901845 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 2 94 9 101 108 58 37.0 3e-09 MEELEISLMQIISYSGEARSLCFEALQSYRDGDKEAGRKQYKDAEENLYTAKRAHSRILK QSANGEFDQISLLMVHAEDQMMASEIIYQMTRELFHCMSETKG >gi|312954207|gb|AENW01000056.1| GENE 24 22341 - 22988 664 215 aa, chain - ## HITS:1 COG:alr0288 KEGG:ns NR:ns ## COG: alr0288 COG0637 # Protein_GI_number: 17227784 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Nostoc sp. PCC 7120 # 5 215 6 216 222 137 34.0 1e-32 MRNWKAIIFDMDGTLFDTETISMKAWKRVGETLQLPTSDEFILSLIGRTRKDQQVVFDSY MPKDWPQEEACSLHTQFKKEEKLKNGVPLMGDVKGLLDTVKAKGYTIAMATSASAEDVEF NLNNADIQHYFEAIISDEMITHGKPAPDVYLKTAQQLNLSPQECLVVEDSLNGVRAAFGA GTTVVMIPDKVQPTKEIKAMCNYILKSLDDLKEIV >gi|312954207|gb|AENW01000056.1| GENE 25 23034 - 23348 412 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399842|ref|ZP_06643988.1| ## NR: gi|293399842|ref|ZP_06643988.1| putative cell-division initiation protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 12 101 19 108 114 118 66.0 1e-25 MAKDKKKKRNKLKTFLSLAAIFIACFLIYAASSDLMMTMKLKDEITSSEEMINSLENQKD DLSKEKQNLENPEYVKRFARGKYMVSKPGEQVFKLPAKNNDDDD >gi|312954207|gb|AENW01000056.1| GENE 26 23747 - 24340 337 197 aa, chain - ## HITS:1 COG:HI1678_1 KEGG:ns NR:ns ## COG: HI1678_1 COG0794 # Protein_GI_number: 16273565 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Haemophilus influenzae # 7 191 35 219 229 160 45.0 2e-39 MKKYLIEAIEREKTALDALSAMSLQECERVMAAIEECKGKVVFCGVGKSAHIGAKLAATF ASLGIPSFFVHATESVHGDLGMIEEKDIVILISNSGTTQEVIQVLTPLHSIGCMTVACCA NRDSILAKACDLTLIYPKVTEADAYNLAPTSSTTLVLVLGDAIACAISKKRGFNPSDFHK FHPGGSLGKRLDDKSCI >gi|312954207|gb|AENW01000056.1| GENE 27 24337 - 25512 671 391 aa, chain - ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 5 387 3 389 390 328 41.0 1e-89 MSGSEFDTVIDRRGTFCTQWDYIEDRFGTDNLLPFTISDMDIACPKSLVYTLKKRIEHPI YGYSRWKNEDYLSAIVHWYASRYDCMISKDWICYSPSVMYSIAKLLQLCSEPRDGVLVFT PAYDSFYKVIENNQRRLISSELLENAGYYQIDFEDVEEKCKEARILLLCNPHNPVGRVWK KQELQKLLQLCEKYDITVISDDIHMDITYKEKGIPVLKLASDCRCFICSSPSKTFNIPSL QGSYVILPDFKIYEAFETMTRYTEFVNSPAILGVLSTIEAYRHCAEWVDDLCSYLYDNLK YTESYIQKHMPKLKFQIPEGCYFAWIDFHELGISDAQMQQFLIHEGKVAIMSGTVYGAKQ HLRFHVGCSRSKVEDGLCRLKKTYDAIERLK >gi|312954207|gb|AENW01000056.1| GENE 28 25509 - 27083 1410 524 aa, chain - ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 5 430 8 438 450 345 43.0 1e-94 MENKKKSLWQFFQMLGKTFMFPIALLSVCGMLLGIGSAFTNSSLIEAVPLLGNPVLQKIF SFMTTLGLFAFNNLGVLFAMAIPLGLLKEEKEFGAFTGLVSFMAMHIGTNFYLTITDQLA AADKMTEAGQGMILGIQTYNTSVLGGIIAGLMVFWLYPKISKVKIPEALGFYSGPRLAPI AMLVIMGIFGMVAVPLFWQPFYNFFKMIGEWISTSGPIGYFSYAVAERVTIPFGLNHLVT STFRFTPIGGTAIINGQEYMGTVNMFLAYVANNMDIPLDLAGKMEQGKLMIQYGLCGAAL AMYRCAKPQNRKKIKGLLITGALTVVIGGISEPIEFLFLFACPPLFFVHTVLNGIANMVL PYLGVLMGYTGDLIQFITFGVLRGTRTGWPIAIAFAAFYFALYYFIFKWSIQRFDIKTPG REEVMAISEEDTEDMDDFAALSSYKGIQMLKALGGKDNIVSIDNCVTRLRLELNDVNLID EDAIKNAGGIAVVHLDEHTIQVIVGTQVYALRKQINKAMEMQQA >gi|312954207|gb|AENW01000056.1| GENE 29 27241 - 28074 778 277 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 276 1 274 277 167 35.0 2e-41 MKIAKIFNNNTVATISQDKTEMIVTGPGIGFHKAVGDQIDERKIEKRYLIENTQRTRFYQ MLENIPVEYFEFSEIIFKKTSKEFKGGLNNQMVLLLTDHIAFAIEREKQGIHLPNLLLPE IKTLYHKEYQIGVWALKYIALKTGVHLPLDEAGFIAMHIINSRSQDHKNSAEEILTFSKQ ILHIIEVTMHIDWKEKDFDQTRLAMHLKYLGQRIFTVDRTHIKQDFNDKMYRMMLEMNPE MKSCLERIKSFVKHNYDYELGRQELFYIMVHILKILN >gi|312954207|gb|AENW01000056.1| GENE 30 28576 - 29046 423 156 aa, chain + ## HITS:1 COG:lin1016 KEGG:ns NR:ns ## COG: lin1016 COG2190 # Protein_GI_number: 16800085 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Listeria innocua # 4 148 6 150 163 112 37.0 2e-25 MFTFRRKKQRELYAPVNGCGIALDDVRDEVFSKRLMGDGCAFLPETTSVCSPIDGDLILV ADTLHAFGVRSREGIELLIHIGLDTVKLQGKGFQALQSVGTSIKAGTPVISFDSSYLHDA TLDMTTMLIVTDCANLKIKEITKGYVNTTDPVIIME >gi|312954207|gb|AENW01000056.1| GENE 31 29126 - 29467 345 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399842|ref|ZP_06643988.1| ## NR: gi|293399842|ref|ZP_06643988.1| putative cell-division initiation protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 111 1 111 114 98 53.0 1e-19 MQNEKKAAVKKRKRKKHPMKILISLLAIGVSCCLIYAASTDVIVMLNLKQEISANNSEIN KLSSQKKELSAQKEKLKDPEYVKRYARGKFLVIKKGEQVFKLPGGSSEDTNGE >gi|312954207|gb|AENW01000056.1| GENE 32 29397 - 29861 164 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293399843|ref|ZP_06643989.1| ## NR: gi|293399843|ref|ZP_06643989.1| putative spore cortex biosynthesis protein YabQ [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 124 1 124 153 140 63.0 2e-32 MLLPTQIQAILYHFLMGWVYAFGFSFLISFVKYLRFPIFKGIVEILYHILFTSLMFIGLY KINGGITNIYLICFFILGAFIYFTWYLSVFLQLFTAIRRLLHPFKVKLLVAKSKIIAIIR LPGKIRKRRKANAKRKKSSRKKKKKKKASDENPD >gi|312954207|gb|AENW01000056.1| GENE 33 29861 - 30163 438 100 aa, chain - ## HITS:1 COG:no KEGG:BL00510 NR:ns ## KEGG: BL00510 # Name: yabP # Def: hypothetical protein # Organism: B.licheniformis # Pathway: not_defined # 7 100 9 102 102 80 41.0 2e-14 MEDNISNPLRFETNPYHNVIIKDRKVMELTGVKQIDSFDSSEFLLETAQGWMVIQGKDLT LGKLDTERGDVVIRGVIEALSYVSNKKGNGKESVISKIFK >gi|312954207|gb|AENW01000056.1| GENE 34 30253 - 30543 487 96 aa, chain - ## HITS:1 COG:SA0464 KEGG:ns NR:ns ## COG: SA0464 COG1188 # Protein_GI_number: 15926183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Staphylococcus aureus N315 # 1 76 1 76 87 69 48.0 2e-12 MRLDKYLKTARILKRRTVSKELADQERVYVNGKIAKPSTDVKVGDTIKVIFGYRELTVNV TMIQKQANKNDASLMFEVVEEKLIKKEEVKDILAED >gi|312954207|gb|AENW01000056.1| GENE 35 30573 - 31067 613 164 aa, chain - ## HITS:1 COG:BS_spoVT KEGG:ns NR:ns ## COG: BS_spoVT COG2002 # Protein_GI_number: 16077124 # Func_class: K Transcription # Function: Regulators of stationary/sporulation gene expression # Organism: Bacillus subtilis # 1 164 1 178 178 76 30.0 3e-14 MKATGIVRRLDDLGRLVIPKEIRKQYRMKEGDSIEFFIDNDRIVIQKFDVMSKHMEEIMI MCDTLRAIYQNTVFFVKDECMVKTDHKIHDHFLMIAQTHRLKDFDNERIYEDSAQRYKGL IYPVTAFGDWYGSFIIVFDKKELEKSELYAVEAFVQLLSRQQQQ >gi|312954207|gb|AENW01000056.1| GENE 36 31319 - 31561 372 80 aa, chain + ## HITS:1 COG:no KEGG:Dhaf_0506 NR:ns ## KEGG: Dhaf_0506 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 1 80 1 80 80 81 48.0 7e-15 MTMGQVCCERIHDLCDERKISLNKLSIMCGMTQSTLSNITSGRSKNPTVSTIKKICDGLD ITLVEFFDTDVFKNLDQEIK >gi|312954207|gb|AENW01000056.1| GENE 37 31639 - 32814 1488 391 aa, chain - ## HITS:1 COG:BS_metK KEGG:ns NR:ns ## COG: BS_metK COG0192 # Protein_GI_number: 16080107 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus subtilis # 3 387 4 394 400 544 68.0 1e-154 MLNKQFFTSESVTEGHPDKICDQISDAVLDAILAQDPDARVACETCCTTGMVMIMGEIST SCYVDIPSIARNVVLEIGYDRAKYGFDGTTCSVLTSIDEQSKDIALGVDHSLETKEGGEE NNGAGDQGMMFGYACDETPEYMPMPISLAHRLARRLTEVRKDGTLDYLRPDGKTQVTVEY ENDRPKRVDTIVISTQHSDTVSLDTIREDLKKHVIDVIVDADMMDAETKVYINPTGRFVI GGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAR KCEIQLAYAIGVAQPVSVLADTFGTGVLPDEEIAEIVRKEFDLRPTAIIRTLELRKPIYR NLAAYGHFGRDDLQVKWESTEPAERLKAYVK >gi|312954207|gb|AENW01000056.1| GENE 38 33018 - 33608 577 196 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDEKRNHDTDAIQMNIAFHNKELKQYQVRIHPDTGESGRIDTVLQLKNDVLHVYIVNVDN TYEKMQETPVTSKDKENFLSSLLFQKYRKEAKDYFRYQKQEQDATTVYTVELTNNEKFSE YINKTDNKREDIHFEELKLSYTIDGKTILKTDMKQRYRTSQDIQEQEYNRLSTETTLHKT RRIAASKQSSEFLKLK >gi|312954207|gb|AENW01000056.1| GENE 39 33827 - 37282 4145 1151 aa, chain - ## HITS:1 COG:BS_mfd KEGG:ns NR:ns ## COG: BS_mfd COG1197 # Protein_GI_number: 16077123 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Bacillus subtilis # 20 1151 26 1176 1177 833 41.0 0 MEILLKELQQNEAVLSIQKKESVLGNLSYMEEALLLAADYRQKPQKLLIIKNNAYTAQKL YERLQALLGDEVLLFSLEESLRVEAIAASPENKAIQMEAMAKLQQQDAFVAVLNTAAAIR FLPSPEVFKNHCITLKQDQEIEYEDLKQLLFEAGYTHVSRVDQPLCYAARGGIIDVYSMN YDHPLRIEFFDNIVESIRFFDIATQRTIEIVQEAMIIPASDLLFTDAQVAELVEQANKAL KNQLSQHDIAMQKLLQEHVNEDLDLISNHMMESRFYKYYAFLKNRSTVFDYAPDAQIILS SAEEVQDSVKHMHEEMVSYLQELFQEGISLHSFDVFTDLYSSIKKHSYMEFHQFVDYKKP ITSQIMTMSLGDINLERTMQEVQHQARERRVLLCLNHKEQEQVKGLLEEANISWRNVTST DTLEPGIQFLNASLPEGFTCLKEQICVYTGKELFHSVKKAARYSNKFKEAEVLHDYQELN VGDYVVHNQHGIGKYLGIVNKKIDGVHKDFLHIAYKGDDVLLVPLEQFKLIRKFVSKEGA SPKLNKLGSGEWEKTKKKVSAKIAELADRLVKLYASRDENIGHAFAKDTPLQKQFEEDFE YELTPDQARAVQEIKQDMESAKPMDRLLCGDVGFGKTEVAARAAFKAVAEGRQVAFLCPT TILSLQHYKTFMKRFRNFPVNIAVVNRFIKPSDQKHIIHDLKEGNVDILIGTHRLLSKDI VFKDLGLLVIDEEQRFGVEHKEKIKELKNSVDVLSLSATPIPRTLQMSLIGIRSLSQLET PPMNRMPVQTYVIEKNFQMVKEIIQRELARNGQVFYLYNNVKEIYNVARKLRDAMPEVEI GVAHGQMTREDIEDVMLQFTDNKYQVLVCTTIIETGIDIPNANTILIEDADHFGLSQLYQ IKGRVGRSDRLAYAYLMYSPQKQLSEIAMKRLKSIKEFTQLGSGYKIAMRDLTIRGAGDM LGPQQAGFIDTVGIDMYIEMLNSAIMEKKGIKPEVKPEMTKANVKVDAYIPSSFATEDYE KITLYQRMEDIHTKKELLAMMDEIKDNYGKLPKAVQLLFEKKRLDICINEPHVDAFRELP KTVELTFTSAWSNSIDGVALFEMMTTISKNITIRYTNGKITMKLPKLKDWLYTVIEVLER TEPMGEEQTAS >gi|312954207|gb|AENW01000056.1| GENE 40 37293 - 37853 680 186 aa, chain - ## HITS:1 COG:BS_spoVC KEGG:ns NR:ns ## COG: BS_spoVC COG0193 # Protein_GI_number: 16077121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Bacillus subtilis # 1 186 1 187 188 203 51.0 2e-52 MKLIVGLGNPGKEYEMTRHNSGFCVLDAIAEECRVDVTQKKFKALIENTRISGEAVVLMK PQTFMNLSGEAVRAAMDFYKLSAQDLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIRH IGTQEFDRIRVGIGKDARIPVIDWVLGKIRREELEDYRQAVELARDAAIYSCSHSFMDTM SHFNRK >gi|312954207|gb|AENW01000056.1| GENE 41 38049 - 38213 190 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADKKLKRPDFILQKDFFVKNDANEQETGPKKQKQKSSKRNQETEASCKENKKI >gi|312954207|gb|AENW01000056.1| GENE 42 38254 - 39369 712 371 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTFQMHKKILTGFDDSGSAHPTYANETYAWEYTKNSLKTAALFANYDYVTCDANQLVKT DANGKRTVIYQGNGYGNLWIVNERMYLYRNNSKENKERELFSLNMQGKDEHAYGDYEVHA VYDKYLVLTNSEETEIHVMDTETEDILLLETDAQYLYTDDDTVYFTEHPKDTDEHIVLAS VKLDATERCRLADVRKEDVNQIIQTSTNLYINCVQVVKDKVYFSCGTYGGSASVYQGGVL AKVKKDGSNFKVLGEAPINFTVYETGEIMKYGRINKPFQDDNGNIWIYRNNAREKLIVNG EDYYRRSTVDEYVDIRNVDVQKDVVYFSVNYSVPDESVSIGWRTGYRLQSSVYYRKNLKT GISEKLYELQF >gi|312954207|gb|AENW01000056.1| GENE 43 39989 - 40795 917 268 aa, chain - ## HITS:1 COG:TM1742 KEGG:ns NR:ns ## COG: TM1742 COG0647 # Protein_GI_number: 15644488 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Thermotoga maritima # 12 266 2 256 259 238 44.0 9e-63 MITDKKMIQKKMEAIRVFILDMDGTIYLGKNLFPYTHDFLNTVKATEREYYFFTNNSSRD LAAYIDKLHGMGIDIDKKQMMVSTHVILRWLKKHHDGRRVYVVGTPALRKEFEAHGWILD EEKPDIVILGFDTTLTYEKLSKACTFIREGALYYGINPDLNCPMEHDTFIPDCGSMAKLI EASTGKYPEFFGKPSGKTLDYIVEETGCSPDQIAIIGDRLYTDIKVADGSEVTSILVLSG ETKAEDIDTSDVKPDIVIEHIGELAKLL >gi|312954207|gb|AENW01000056.1| GENE 44 40812 - 42173 1451 453 aa, chain - ## HITS:1 COG:BH1862 KEGG:ns NR:ns ## COG: BH1862 COG0371 # Protein_GI_number: 15614425 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Bacillus halodurans # 17 316 12 316 399 218 36.0 2e-56 MKMKVATFEINDYLGHAFTCDCGKQHTTRLEHVRVCDHVKEDILKYLQEHAYHTVYMIED ENTCRVYGEELEAYLNANGIASDRVILEADVVPNEASVFRILVNMKRQYDYILGVGSGTL NDLCKFISYKLSLNYGIAATAPSMDGFASVGAALITDNLKTTYDCHVPTAIFGDLDVLAN APLDMIKAGLGDIVGKYNCLVDWKIAHMINGEYYCQTIVDMVYKSIKEVVAHADGVMTRD KAAVKAITEALIETGMAMGFVGNSRPASGSEHHVSHYWEMKFLFAHHAPVFHGTKVGLAT PGVIAMWKKLARDGIDFAACRKRVKAFDKAAWEAMVLDRFEAAVPGVLALEEKAGKNDIE AALKRIDIMEEKWPDIQAVIEQELPQPEEVTAILKSVEAPYRPMQVGIDEAMTRDGVILA KEVRVRYGLLQLLWDLGLLEDYSTAFVAYYRNN >gi|312954207|gb|AENW01000056.1| GENE 45 42183 - 43037 974 284 aa, chain - ## HITS:1 COG:ECs5069 KEGG:ns NR:ns ## COG: ECs5069 COG0191 # Protein_GI_number: 15834323 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 2 251 3 246 286 195 39.0 8e-50 MLANLNEVWKLADEKKIAIGAFNIVNFENILAVLDTTEKLNMPVILAFAQTHEENNVMNL DTIGPVMVLMAQRAKVPVVVHLDHGVNLDYIEKSLKMGFTSVMFDGSALTYEENIRQTKE AVALARKYGVSIEAEIGKMAGITLNNEGVTENRASDRRNYTDPAEAKDFVEKTGVDCLAC SFGTVHGEYFSEPKLDFELVKELKEAAGVPIVMHGGSGVSHADYKKVIANGVRKINYFTY MDKAGGEGVNAASPVKYFHDAAKAGQDAMQKDIESAMRCFVNMD >gi|312954207|gb|AENW01000056.1| GENE 46 43140 - 44183 1144 347 aa, chain - ## HITS:1 COG:PA4153 KEGG:ns NR:ns ## COG: PA4153 COG1063 # Protein_GI_number: 15599348 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 1 328 11 341 363 143 32.0 5e-34 MKACVLEGPKNYQIKDIPVPEMKEDEVLVRVLTSGICVNDVRDYQGCKWSYPRIGGHEYS AVIEHIGTGVDPSLFHIGDKVINYIIDDCGVCPDCKHHHENICSNFTKGTAYFNENGFSG FYGFSEYAVVKARHLYVYPKETPDDEAAFTEPLACVINSINRSHIKMGDDVVVIGGGVMG LLHVLCAKRQGARVILSETDAKRRAFGLKLGADNVIDPLEFDPVEQVKKLTNGRGANVVE NTTAIPSVAAQAIQMTAKSGLCNMFSSIHPNEPILVDAGRLHSQEIVVTGTQNGTIETFA QAIDCISKGIIDVKPLIEAVYDYEDVVEAMECASRPDTYKVMLRFSE >gi|312954207|gb|AENW01000056.1| GENE 47 44311 - 45150 1152 279 aa, chain - ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 4 278 13 286 286 159 35.0 6e-39 MAEQKARHVIPKKHLYRAAFNWETWVQCCYNYERMMGMACGHTFVPVIDDLYKDDPDGVA KRKEVMEREMEFFNVHIEFGSCILGMAIALEEQKSLGEPIPGEFITSLKTSLMGPLAGIG DTIYQGVLIPILLAICIDITLTGTVWGAIVYLILMLAISYIFSFANFFFGYQQGSEAIMD FLEKGLLDKLLLGAQVMGCMVMGGLIANYVKVSCGLELVTSGSKFNVQTQLFDAVMPGIL PFGFTMLVYWLMKKRWTSIKIIILIVIIGIIGGLTGILA >gi|312954207|gb|AENW01000056.1| GENE 48 45152 - 45937 909 261 aa, chain - ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 2 247 3 249 249 108 28.0 1e-23 MSIVQAILLGVLYWIGEANLPFVGLWTVQRPLVCGWIAGIILGDALTGAMVGASINLVYL GFISAGGSMPADMALAGTLGAAFAITGNLDADTALALAVPIGLLGTLVWYCRMTFDSIFV HIGDRFVEKEQYNKIWIANVLLPQIMAAVICIVPCSLAAYFGATYIQGFITMLAGTPLKI FQIIGGLMPALGIAITLQYIFKGESRVFLFIGFVVAVYSGLALLPLGVLSLLCALVYVQV RYREGSGKGNIAEESELEEDF >gi|312954207|gb|AENW01000056.1| GENE 49 45984 - 46463 735 159 aa, chain - ## HITS:1 COG:YPO1758_2 KEGG:ns NR:ns ## COG: YPO1758_2 COG3444 # Protein_GI_number: 16122014 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Yersinia pestis # 4 159 3 157 162 101 37.0 6e-22 MRNIVLARVDDRLIHGEVVTAWTPSLSANRIVIVDDTVAADKFNKRVLMALAPQGTKVAV LSVEGATKALQKPDPGNERVIVLTKTPIVFEQLLDGGVEIKEVCLGGMGIRGDRKPFINN VSASPDEVDSIRRMKNEKGVNVYYQLVPEQKVVDISNLL >gi|312954207|gb|AENW01000056.1| GENE 50 46445 - 46885 416 146 aa, chain - ## HITS:1 COG:YPO1758_1 KEGG:ns NR:ns ## COG: YPO1758_1 COG2893 # Protein_GI_number: 16122014 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Yersinia pestis # 1 127 3 130 162 79 32.0 2e-15 MKVILVSHGSFSKGLFETMEMVLGEQQNLSYVGLYPHQGVDILKENIEKEFTKADEGEEI LVLTDLFYGSPFNAVVQLMNSYDVYHLTGINVPLLMEILLMRGNGKSAAEICDEAMKLAG STVQNVKKYLADMLDNEEDEKCETSF >gi|312954207|gb|AENW01000056.1| GENE 51 47077 - 48534 962 485 aa, chain - ## HITS:1 COG:TM0116 KEGG:ns NR:ns ## COG: TM0116 COG1070 # Protein_GI_number: 15642891 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Thermotoga maritima # 3 484 4 491 492 249 31.0 7e-66 MYYIGLDIGTSALKTTLMDARRSIVYENSYGYTILQPQEGWREIDPDVWMQAVMKGLHDI FARCNPQEVSVIGVTGQMHTTVFLDKNGEAVRNAIMWTDLRTAGMVEELRTECSQREETR HIAEILSPGSPAVNTLWIKEHEPQSFARIHKIMTPYAYIVYKLTGQYSMDYCEASTSSLY DIATKKWSVYMLDRLGIEESCLGPLYASCDVVGTLQQTLCEQLKVNHDIRVIAGTGDNPA NAVAMGILNRKEPVISLGTSGVVIMPKRDMDFEGKGKNVLFNADHTQFVNIVQGTVRSAG GTHKWWVENIVKTDDMAVDQQLISSDRFGKNSVLFFPHITGDKLMYHDLCVRGAFVGLSF ETRREDMTQAVFEGVSYAIREVLESMKLAQWPSRIQINGGGTRSPVWMQIMANILHTELK VVTESATPGYGAALLAALADGVSEKEACIGQGKVYAAEKVFTDAYDQQYKKYKRMYSALK NIMQE >gi|312954207|gb|AENW01000056.1| GENE 52 48550 - 49395 896 281 aa, chain - ## HITS:1 COG:ECs4355 KEGG:ns NR:ns ## COG: ECs4355 COG0191 # Protein_GI_number: 15833609 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 276 1 276 286 285 53.0 6e-77 MKIVNGFDLLAYAKEKKLLLPAFNTTNLEMTKAIIKGLNAVHLPGMVQISSNNLHLSNPE VIAYMMREFLKGTDTPVGLHLDHGKSFDDVKACVDAGFTSIMVDASHLNFEENIKEVKKT VEYCHFYHVPVEAELGAIMGKEDDDVNEADCKTDPALVKEFVERSGCDILAVSIGNVHGL DAVAKIDLALLKRIAEVSPVPLVLHGGSGIPFDQVKQMRDYNMIKVNYGSDLRRAFIQTF GEAYEKNHNEANLYGLSAKAVENVSKTAADLVLIINGLKES >gi|312954207|gb|AENW01000056.1| GENE 53 49409 - 50452 849 347 aa, chain - ## HITS:1 COG:PA4153 KEGG:ns NR:ns ## COG: PA4153 COG1063 # Protein_GI_number: 15599348 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 1 317 11 330 363 167 34.0 4e-41 MKACVLEKPYDVRIKELPIPEPKDDEVLLRVTVAGICTNDVRDYKGSRYTYPRIGGHEYA GVIEKLGKDVDNGIFHIGQKVVNYIIDECGVCYNCKHEHENICDSAESGKTFYNEGGISG YFGFSEYIAVKARHLHMVPNDTPDELAAFTEPLACVINSINKTGIRMGDDVVIIGGGVMG LLHVLCAKRQGASVIVSETSADRRKLALELGADAVIDPVESDPVEKIKQLTNGRGANVVY NTTAIPAVAKQAIDMCAKSGLVNMFSSIHPNEPILVDAGRLHSQEIRITGTVSPTVRSFA QAVDCIAKGIIDVKPLIEKVYDYTDIKEALEAAMRPETFKVLVKFSE >gi|312954207|gb|AENW01000056.1| GENE 54 50753 - 52669 1703 638 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 23 453 22 460 499 134 25.0 5e-31 MLTKRQSSIFLELCEKVGEYYKANYFSDKFNISLRTIQNDIKAIKEDTASLSDIFIIDSR VPFGTRIKILDRERFAHYLNDLKMQSDEYNINYRDDRIYKLLNFLLSQRKSISLTKCADY IYVSKSTLTSDLKELEKTLSKFSLRLIQTKGYIWIDGLERDKRICLMDVSYAYHPMIPSK LISDTEAVHVEFIRKTLMKELLEKQYPISDVEFQNIIIWLNISIRRITNFFYLNDEDIDG EGTYDTEIKIAGNIFERIETKYLIRVPQTEINFLAMYINNHSNFSNTDYISEDLNTFILH ALQRIHESYPTDFTHDVNLRISLALHCVPLISRARNNVQIKNEMLDYIKQSFPYAFDIAT YFSYLLSERYTCKIKESETAFLAIYFNKSINEYSVLKGNKRVCIITNLKRSEYFLLEQFL YDKFQKYIVSITFVSSNELDDLDLDAYDLFFSTEDNRATESGLATKIAFFPDSNELEKIK VRIEGFKNVEDIMKLFDPKLFFVKDFTEKEEIQTCLVHAASDLYKLDNLAEEIELREEFG STYFGNGIAILHPMHLLTDDSFIGEIILKKPAVWDTEGNHVNLIFLVCIQKNNLEAFRAW DYLSPLLFNNEFKQEILSVEDYDDFKRICEENLKSHIL >gi|312954207|gb|AENW01000056.1| GENE 55 52682 - 53350 638 222 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|218283690|ref|ZP_03489651.1| ## NR: gi|218283690|ref|ZP_03489651.1| hypothetical protein EUBIFOR_02245 [Eubacterium biforme DSM 3989] # 3 220 5 219 225 143 38.0 8e-33 MTFTFLITAAVLIILLIIPQIMKRVVYKKLTGYLSERDYERFEKLLDGFACTFSFKPYNR EYMRLNSYFMQGDKRKIEAQLDTIFSKMKMRDQQKAAAARQGFYFYMENQKFKKAESMLH ICRKADKNTAELHTMEMMYSILALKKSEYIEEIRERLEPMKKMPDAFTNDAKRVRIGIFE YLLGLQYTYLCNKKLSKTYLTSALKNCRNTPYEYEIKKLLKA >gi|312954207|gb|AENW01000056.1| GENE 56 53353 - 54066 458 237 aa, chain + ## HITS:1 COG:CC0101 KEGG:ns NR:ns ## COG: CC0101 COG0036 # Protein_GI_number: 16124356 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Caulobacter vibrioides # 13 205 16 207 226 117 32.0 2e-26 MKLTTTEFSFNASLSCIDLGHIAESMEEINQSRIKSLHYDMVDGQFNECFIFGDLMLKVF RSYTKLPITVHLACRNPIPYIKPCIANGADYIAIHYEADIDIEKAFQTVREFGAKPVLAF RCDTPVPEDFIKVSEHAEWILKLCVQPGFSGQTFQEEAVRHIEKMHQLLMTAGLDRVIEV DGNIHTGTIQKCAKAGATMFTGGTSGLCNHKHSIDESIVLLEQAIIAGGNSNGIDYE >gi|312954207|gb|AENW01000056.1| GENE 57 54047 - 54514 366 155 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914682|ref|ZP_02076896.1| ## NR: gi|160914682|ref|ZP_02076896.1| hypothetical protein EUBDOL_00689 [Eubacterium dolichum DSM 3991] # 1 142 1 140 143 132 47.0 8e-30 MALTMNEESKNTELKKLLCEQEKYRATTWGNIVSTTPRLLSYAVDADKRPNIGFRNIYCY VGLTKTNLHIVTLHSLDVTRATGYFRIPLQDIQGATVRKGVFKSSVILSFGNEKFKIFWF NEATGTDMKKQRAAVRRICDYFIDISKQENIRGSV >gi|312954207|gb|AENW01000056.1| GENE 58 54976 - 56166 929 396 aa, chain - ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 3 391 4 391 411 318 45.0 2e-86 MSLQDTPNAVRLHIGIFGKRNSGKSTLLNAITKQKVSTVSPVAGTTTDPVVKAMELHGLG PVVFYDTAGFDDEGELGNLRVEKTVEVTQKTDMAILVFRDMDISWEMTWYKKLKEKQIPV LCIWNQDAEDEKVYADMVTQIEKKTGSDVLITNVKELVTDDVCQALIRLLPSDFTEETIT GHLVQENDLVLLVMPQDIQAPKGRLILPQVQTIRDLLDHKCIIQSCTSDTLDAALSALSK PPKLIITDSQVFPLVYEKKPEESLLTSFSVLFAKYKGDIQYFIKSAKAIDQLTVNSRVLI AEACTHAPLAEDIGRVKIPAMLKKKYGDGLQVDIVSGTDFPKELQDYDFIIHCGACMFNK KYVQFRVEQAKKEGIPMTNYGIAIAYMKGILEHIIY >gi|312954207|gb|AENW01000056.1| GENE 59 56168 - 57586 1559 472 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 472 1 472 472 743 77.0 0 MYNKHSLKATEFIDDEEIKETLCFAQENKHNKELISSLIERAADCKGLTHREAAVLLECD LPEENEKMFTLAKQIKQKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLTQE EIRQEVIALQDMGHKRLALETGEDPVHSPIEYVLESIKTIYGIKHKNGAIRRVNVNIAAT TVDNYRKLKEAGIGTYILFQETYNKQSYEQLHPNGPKSNYAYHTEAMDRAMEGGIDDVGC GVLFGLNMYRYDFVGLLMHAEHLEAVHGVGPHTISVPRICPADDINPNEFSNAISDEIFT KIVAVLRIAVPYTGMIISTRESQKTREKVLDLGISQISGASSTSVGGYAVPEKEEENSAQ FDVSDNRTLDEVVNWLLKLGYIPSFCTACYREGRTGDRFMSLVKSGQIANCCHPNALLTL REYLDDYAKEDTKKLGSAIIDRELLHIPNEKARESCASYLHSIDNGKRDFRF >gi|312954207|gb|AENW01000056.1| GENE 60 57565 - 58653 972 362 aa, chain - ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 1 345 1 339 350 286 41.0 4e-77 MDNVSFLIEKLYMEGWLRDEEFLEVLIHHGENEIRNLLAEYARKTAHRYYGNKVYTRGLI EFSNYCRNDCYYCGIRRSNSHAQRYRLKKEDILTCCDEGYNLGFRTFVLQSGEDGYYTDE LLIEIITDIKRRYPDCAITLSLGEKEKESYQCYYDAGADRYLLRHETSNAQHYRCLHPKE LTSEHRKQCLKDLKAIGFQTGCGIMVGSPSQTLKHIVEDLHFMKELQPEMVGIGPFLPHH DTPFHNEPAGSFTLTLTLLSIIRLILPDVLLPATTALGTIDPQGREQGILAGANVVMPNL SPIAVRKKYMLYDDKICTGDEAAECRVCLSNRMKRIGYELVTDRGDSIRKLEEKRICTIN IH >gi|312954207|gb|AENW01000056.1| GENE 61 58646 - 58924 307 92 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_0233 NR:ns ## KEGG: EUBREC_0233 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 6 85 1 80 81 102 58.0 5e-21 MEEDVMETRVAVIGIIVENTESAEKINSILHEYAQYILGRMGVPYQKRGISVISIIIDAP QPVISALSGKLGKLEGVSTKALYSNVMENIDG >gi|312954207|gb|AENW01000056.1| GENE 62 59298 - 61400 1611 700 aa, chain - ## HITS:1 COG:all1175_3 KEGG:ns NR:ns ## COG: all1175_3 COG2199 # Protein_GI_number: 17228670 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Nostoc sp. PCC 7120 # 353 520 3 174 183 100 37.0 1e-20 MEVYKKEATELEEQLLILRKQGRPEEILQKASRLLEIAQLHQDSYYIAAALYFQAYYEFS RGNYKECLQHCFQSEEYCEKNEYLKILAYIHNLQGIVYSDLGDFLTSLHFLLKAYYLTMD HPEFEYHYAIINNLGTLFHDIDCEQRGIEYFIRAFQERRKMHLEFSLNDGIILTNILMVY MKMNRAAEAAPWYETFLRYFKDNDHVVLTENRIMISIFELWHRKDIAKLKQRLYDFLEAA PHTSDYKNTVRNYMDCIHICISLKLKDQAYLLYRNLEKMESHHPNSINSARLADIKVELA MQFCSKEELFLHLLEAYRLNRKAREQEKRNNLQSMMNKMDLENALYEQHIILQRNEELLR SNKLDPFTEVLNKTAFRNHVLEAIRGKRADEKGAFFILDIDNFKIINDTCGHLVGDQVIM KVAANLQNNLREEDLVGRIGGDEFCMYLNHISCIEDIEKNALRIIDNIRNLNISKLQKQL TVSMGICIVDTEKDFEDIFMKADHALYEAKANGRDQFVVYKNDYFSQIMQKKEKRKDRHE VTVNDILPKVFEMLNVFDKRDELLAQTMEFICRSMNVKNIFLLRFENEAYSMGRVYIYDL ERNKASKHVHIQTDPAYLKAFDDRHLYYQNQINVNDIRYINAYEQYQIQATLQHQILYDH RMIGVLGMNDRRIHEWNEDDLSLIRNLSYAFATYLIAIEK >gi|312954207|gb|AENW01000056.1| GENE 63 61494 - 62108 657 204 aa, chain - ## HITS:1 COG:BH4063 KEGG:ns NR:ns ## COG: BH4063 COG1847 # Protein_GI_number: 15616625 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Bacillus halodurans # 2 197 4 203 207 95 33.0 6e-20 MKSYTGKNLEDVLKQAAEDKGVSVEELTYNVTEETSGFLGLGSKTTITAYCRNDIREFMK AYLQTYFEGIHMEVSIDVVDDGEYFRVNLDAENNAILIGKNGQTLQAVNTVLKSASSSEF KRRIGVLIDINGYKEEKYQKVCSLALRVAKSVQRTKTDATLDPMPADERKAIHNYLANMK HIATVSEGEGNQRRLKIVYSEDNA >gi|312954207|gb|AENW01000056.1| GENE 64 62121 - 63116 1128 331 aa, chain - ## HITS:1 COG:BH1169 KEGG:ns NR:ns ## COG: BH1169 COG0706 # Protein_GI_number: 15613732 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Bacillus halodurans # 87 324 34 258 280 104 30.0 2e-22 MKDFFRNKKKFLLVVMLMVVTLTGCSVPRGQNGKTYVNSIYTNNDVQVKRGDVDIPDDKE LQKKYKDYKADDLITIEKTTFSDAMDEGWFNGLIVWPIAFLINFVADFSDAGIGIIAATF LIQLLIFLFSIKSQVASQRMQSIQPEMNKIQAKYAGKTDDRSKMQQAQEMQALYSKYKIN PFGTLLVTFIQFPVILGMYQATMRAYSVVTGSFQGINLAKTPIEGFNLGDYWYIVIFVLM VAFQLLSFKMPQWLQEHRKKKMHVKEKKYAEPKKKGGNGMMGSMNMMMYMSTGMIAIFAI NWPLGMSFYWLVNSLARVIQNIVIHKFFIKD >gi|312954207|gb|AENW01000056.1| GENE 65 63148 - 63474 318 108 aa, chain - ## HITS:1 COG:SPy0246 KEGG:ns NR:ns ## COG: SPy0246 COG0594 # Protein_GI_number: 15674428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Streptococcus pyogenes M1 GAS # 1 108 1 108 119 59 36.0 2e-09 MKKEYRVKKSQEFAEIMNYKKFYTCPSFAIYVKPRKEDHARVGISVGKKMGKAVVRNKIK RQVRMMVQDIYSFEEKFDTIILVRVKYHEENYINNKKLLERLVKKVKI >gi|312954207|gb|AENW01000056.1| GENE 66 63663 - 63797 195 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755166|ref|ZP_02427293.1| hypothetical protein CLORAM_00671 [Clostridium ramosum DSM 1402] # 1 44 1 44 44 79 86 9e-14 MKRTYQPSKRKHQKTHGFRARMATVGGRKVLARRRAKGRKVLSA >gi|312954207|gb|AENW01000056.1| GENE 67 63912 - 64295 423 127 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNWFEKSTKRMIQHRLASTYQMSLLLELFLALLSFVLIADKLSSLSVFFGILAVVVAARI IFLYAVMSLRVETRIVYGIMLLLQALISTVLFFYASIFIFIVVSAFIVLLFPIFTHAFCR KMAWIDK >gi|312954207|gb|AENW01000056.1| GENE 68 64996 - 66354 1269 452 aa, chain + ## HITS:1 COG:SA0001 KEGG:ns NR:ns ## COG: SA0001 COG0593 # Protein_GI_number: 15925706 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Staphylococcus aureus N315 # 10 449 4 450 453 256 36.0 4e-68 MSNFAKVQLEQIWQKTLQLINESAHFDDAVFNAWYKEDSHLFDIEDDFATIVVPYKINKQ IMMDSIDLIQQKLSDVLDMKVSCQILLKSEVDMLQPSSVIKRRNEILFEDKVKKEYTFDS FVVGKNNREAHAAALSVCYYPGKFNNPLFIFGNSGLGKTHLLHAIGNYVKANKADEKVLY IYSEDFVTLLIEAMKNKTVEDVKEMICSVDYLLIDDIQRLKQSTSQEIFFNMYNKLISDN KQIVITSDIHPTELKGIENRLISRFSSGLSVSVGSPEFETAKAILQKKMEGRSDEIMIDD EVLDYLATRFASDVRKLEGTLNELFFKAILYNPERIDITFAKEIFKENPIVVKQEDELTP KRIKNAVCEYYGLTRTQIESKSRTKNIANARHIAIYLCRTHLEMPFAKIGFEFGNRDHST IMSSYEKMMKLLKEKETFQQAVMQIESNLGIK >gi|312954207|gb|AENW01000056.1| GENE 69 66505 - 67623 1321 372 aa, chain + ## HITS:1 COG:BS_dnaN KEGG:ns NR:ns ## COG: BS_dnaN COG0592 # Protein_GI_number: 16077070 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Bacillus subtilis # 1 371 1 378 378 244 37.0 1e-64 MYFKVSKKEFYNALSVASRAISTFSPLPAFSGIKIDAKEDCLILTGSDSDVSIQTKLTKS EECVLEIRDMGSIVIEAKYILEIVRKIDADEIEFEMIDGSLTKISGNTAEFRINGMRANE YPAIDFSKPKECFALKEETLKKVILQTSFATSDKETRPVLTGVNFHCEGNTLHCVATDSY RLAKKTIDISESLNFNITIPAKSLSEVVKTLEGEGEVEIAVNDKKAQFIIHDTIVQTRLI DGVYPETSRLIPLQFDYELTIDSRDLLNAIDRASFIKNDGVSVIKFSLSEQECVLSSKSV EVGSSTEVLSSASFTGSSLEISCNGRYVFDAIKALSGSLVTFRLCGEMKPFIIKSVDDDN VLQLVLPVRTYA >gi|312954207|gb|AENW01000056.1| GENE 70 67831 - 68034 244 67 aa, chain + ## HITS:1 COG:BS_yaaA KEGG:ns NR:ns ## COG: BS_yaaA COG2501 # Protein_GI_number: 16077071 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 3 61 5 63 71 68 59.0 3e-12 MDIKITGEYITLGQLLKMTDFIQSGGEAKFAVKSLKINVNGEQENRRGRKLYAGDVIDIE GSVFSLS >gi|312954207|gb|AENW01000056.1| GENE 71 68031 - 69131 908 366 aa, chain + ## HITS:1 COG:SP2227 KEGG:ns NR:ns ## COG: SP2227 COG1195 # Protein_GI_number: 15902031 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Streptococcus pneumoniae TIGR4 # 1 361 1 358 365 238 36.0 1e-62 MRLESLRLHNFRNYADVNVSFTDGIHILTGKNAQGKTNLLESILYLSTTRSHRTSEDKDL IKEGEQAFFIKALIAKEQKTEEIRVTVNEKGKNLFIYQNPVNRVSDFIGEFNSVMFCPDD MNLFQASPRVRRRFVDMELSKISKKYVSTLYVATRLLKERNAYLKQERVDRSYLEVLTSQ LVDASVVIMKQRHFFLEELLDKCRTFYRQLSNDDTDITVRYLSCVPFSDSEEALKEALLK KYQKHQDRDLLLKQTTAGIHKEDFIFEMNGHELVSFASQGQKRSVLLALKIGMIHMIHEI IQEYPVLLLDDVFSELDSYRKQELLKSLPKEVQIFISTTDFVEMDDMKSDRRVTLWNVSN GTIERC >gi|312954207|gb|AENW01000056.1| GENE 72 69143 - 71086 2151 647 aa, chain + ## HITS:1 COG:BS_gyrB KEGG:ns NR:ns ## COG: BS_gyrB COG0187 # Protein_GI_number: 16077074 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Bacillus subtilis # 14 647 2 638 638 794 64.0 0 MDENQMKEIEEMEDKVDHSYTADDIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDN SIDEALAGFATDIEITIEKNNIIRVEDNGRGMPTGIVEKTGISGVETIFTVLHAGGKFGG GAYKVSGGLHGVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKATGPLKIINDSEKHGS IVRFKADPEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCDEREAEPKRIEYKYDGGIR QYVEYLNKNKTPLHEEVVYVEGIEDGILAEIAMQYNDGYIPSIYSFCNNINTMEGGTHED GFRLALTRIINAYAREQGMIKKDETLAGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSE VRKIVSSILGEQLDRFFMENPETAKIIVDKAILASKARLAAKKARELTRRKSALEITSLP GKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQAILPLRGKILNVEKARLQRIFEN NEIRSMITAFGCGIGEEMDVSKLRYHKIIIMTDADVDGAHICTLMLTFFYRYLRPIIEGG YVYIAMPPLFKVAKGNRVEYVYKEEEVETVRASMGENVNVQRYKGLGEMNPEQLWETTMD PAFRTLKQVNIDDAMEADSIFEMLMGEEVEPRRDFIQENAIYATLDI >gi|312954207|gb|AENW01000056.1| GENE 73 71103 - 73616 2804 837 aa, chain + ## HITS:1 COG:BS_gyrA KEGG:ns NR:ns ## COG: BS_gyrA COG0188 # Protein_GI_number: 16077075 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Bacillus subtilis # 4 804 5 806 821 969 61.0 0 MDLNKEKLIQVDISKEMKTSFLDYSMSVIVDRALPDVRDGMKPVHRRILHAMNELGIVAS KPFKKSARIVGEVIGKYHPHGDTAVYDAMVRMAQDFSYRYMLVQGHGNFGSMDGDGAAAM RYTEARMSKIAMEMMKDINKDTVDFIPNYDNEETEPAVLPARFPNLLVNGSVGIAVGMAT NIPPHNLTETIDATFAIMDNPEISVVELMDNYIKGPDFPTGGIILGRAGIRQAFETGRGS IMVRSKHHLEDMGNGKTRIVVTEIPYQVNKANLITKIADLVREKQIEGITYLNDESNREG IRIVIELRKDAQPDVILNQLYRMTQLQTSFGVNMLALVEKTPKQMGIREALQHYVNHQID VTVRRTKFELKKAEDRAHILEGLRIALDHIDEIIHLIRSSQNDAEARTGLMEQFKLTEIQ ANAILEMRLRRLTGLERDKIENEYRELMNTIADLRDILANHDRVLGIIRDELTEVKNRFG DERRTEISEADYDMQDEDLIPVEDVVITMTTNGYIKRMPTDTYRTQNRGGRGVKGMSVNE DDIVDLLITMSTHDYLMLFTNLGKVYRIKGYKVPNSGRTAKGLPVVNLLNLDKEEKVRAL VPVRPDSESSFLLFVTKNGLVKRTPMSEFDSIRQNGKIAITLREFDELVGVKETTGDDEI IIAGSNGKAVRFHEDDIRAMGRTASGVKGFNVDGSIVVGAATSKEGTHLLAVSENGYGKR TAIEEYRLTTRGAKGVKTINVTNKTGELVSVRAVNGDEDAMIVTNSGIIIRISVDDIGIY SRNTQGVKLINVADEESVAKVAIVEKEEEEPEEAAAGEALENNEETTEQIIDNPVEE >gi|312954207|gb|AENW01000056.1| GENE 74 73874 - 75160 1102 428 aa, chain + ## HITS:1 COG:PH0710 KEGG:ns NR:ns ## COG: PH0710 COG0172 # Protein_GI_number: 14590588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Pyrococcus horikoshii # 1 424 6 449 460 331 40.0 2e-90 MLDMKFLRENPEIVKENIKKKFQDHKIELVDKVIAMDKENRSLKQRGDELRSKRNAMSKE IGGLMAKGLKDEANAIKAKVQTMADEMKETEVKETELAEKIKEMMMQIPNIIHPTVPVGK DDSENVELQKYGEPVIPDFEIPYHTDIMERFEGIDLDSARKVAGNGFYYLMGDIARLHSA VISYARDFMIDRGFTYVVPPFMIRSNVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSMI GKFIDTILDEKKLPYTYTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEESAD WFVKLYTNTVDLFRSLDIPVRTLECCSGDLADLKNKSVDVEAWSPRQKKYFEVGSCSNLT DAQARRLGIRVKGENGKYFAHTLNNTVVAPPRMLIAFLENNLNKDGSVNIPEKLQPYMGG TKILMPKN >gi|312954207|gb|AENW01000056.1| GENE 75 76109 - 76564 313 151 aa, chain + ## HITS:1 COG:SA0516 KEGG:ns NR:ns ## COG: SA0516 COG0590 # Protein_GI_number: 15926236 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Staphylococcus aureus N315 # 5 151 7 153 156 173 56.0 1e-43 MKEEYMRAALREAEKAKKIDEVPIGCVIVKDDKIIARGHNLRETKQQSINHAEIIAIQKA CKKVGSWRLEDCDLYVTLEPCCMCAGAILQSRIRTVIYGTADPKGGSIESTLHMYEQPGY NHYPKVESGVLQNECSQLLKNFFKEKRLKKK >gi|312954207|gb|AENW01000056.1| GENE 76 76659 - 78467 1109 602 aa, chain + ## HITS:1 COG:lin2852 KEGG:ns NR:ns ## COG: lin2852 COG2812 # Protein_GI_number: 16801912 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Listeria innocua # 1 363 1 366 579 335 47.0 2e-91 MAYKALYRTYRPNSFDEVAGQKHVVQTLQHAVEQHKIAHAYLFCGPRGTGKTSIAKIFAK TINCENPNHKPCLECDNCRAVQDGSHPDIIEIDAASNNGVEEVRTLIEKVKYAPLKGKYK IYIIDEVHMMSTGAFNALLKTIEEPPEHVIFILATTEPHKVLPTIISRCQRFDFTKVPRE EIVQRIHTILEREQITCEEEVIRIIAQLADGGLRDALSILDQCIAYAQNHIQVHHINEIY GITTIQEKLDLYRYIYGKDAVSLLNAIDQLIEKGIDIKRLTVDLIEILKESIIFEYTKDA SLLHILNSEEVLTLIDGKSIAERFQMIHLLMETYDKYRSAANAGSYFEVCLLQMLDVKAT VVTTTISHPLETPRQEQKPVSTVNNVSRETSKKKPILEVPMDDEPFTPYDTPVFDSPVTK SAKSSHIPENIVSKEITAVSTKALKPLDNEFVLGLLAGANKPEKAKDSQHFQKIPEFMLD FKYAKYGSLLKNAGIVGSGNTYIVVCVDNQAVANEINEMDSKNEFHDFITVLMEKNKKIF AISADQQKYVIKEFKDRMIAGTLPDPIQIEAVTIEKKEVKELTQEEAVLDLFGQENIIIT EE >gi|312954207|gb|AENW01000056.1| GENE 77 78472 - 78780 411 102 aa, chain + ## HITS:1 COG:RC1337 KEGG:ns NR:ns ## COG: RC1337 COG0718 # Protein_GI_number: 15893260 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Rickettsia conorii # 1 102 2 103 107 67 41.0 5e-12 MNMQGLLKQAQKMQKELTKLEDELNEKVYETTMGGGVIKVEVKGSMSVESISIDESLLEK DNKEDLEDMLKSALNDAFAKAVEDKEKNMNQITGGVKMPGGF >gi|312954207|gb|AENW01000056.1| GENE 78 78780 - 79376 396 198 aa, chain + ## HITS:1 COG:lin2850 KEGG:ns NR:ns ## COG: lin2850 COG0353 # Protein_GI_number: 16801910 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Listeria innocua # 2 196 3 198 198 210 51.0 2e-54 MYPKKFEALVECYRRLPGVGIKTAERYAFQTLEWDDETMDSWIHAFQNAKEGLKKCAVCG NLSEDDTCDICGDQSRNSQIICVVQSPKDVIAMEKTKEYSGVYHVLNGVISTSKGILPED INIDSLLNRISEETEEIIIATNPTVEGETTALYLSKLLEKYPVTVTRIAHGLPMGGHLDY ADELTLIKAIEGRKKMEP >gi|312954207|gb|AENW01000056.1| GENE 79 79681 - 80616 437 311 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914824|ref|ZP_02077038.1| ## NR: gi|160914824|ref|ZP_02077038.1| hypothetical protein EUBDOL_00832 [Eubacterium dolichum DSM 3991] # 1 304 1 307 314 291 47.0 5e-77 MGSIAYITDKNMMEYHRLHGNSVINFWKPSIKSITDFKKGDMLFFLTKGTERGKKREKGI LGYGHLRKQQNMGFTQMWNVYKTLSGYPDKESLKQAICKITKQEEVPELLSCMELENVIY FQYPIYLSEIGMKISNNIESFFYIDKEDIQNTGRLLHLASSIGTDMWVNSTVITKEKNMQ EDAVLQILENLSRRIETSFYSEYEESKIRHYIQKLQDANIQSIRNSKTEYWTKRDGKIMI LLPCLLNFIDAESKMQYSIGHYQLFKVYINQSEYADQISIKLLFNQKIHSNWRLALSYLK IEYEERLVEED >gi|312954207|gb|AENW01000056.1| GENE 80 80847 - 81404 467 185 aa, chain - ## HITS:1 COG:BS_yjbK KEGG:ns NR:ns ## COG: BS_yjbK COG4116 # Protein_GI_number: 16078223 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 178 1 181 190 78 33.0 6e-15 MNKHVEKEYKMLVNKEQFDKLCSLYENLNFITQTNTYYDTVNGDIQKKKGAMRIRERNGR FLFTLKMRQENLDGLCECECEVSENSIHALQSEEIVQLLHEYQIEAAIIPLTTLVTKRAV VETENAELCFDISTYGNHTDYEIEYEYKQPHDGLSVFQKLLSHVQLVYEKNCTSKIQRAL QAVEE >gi|312954207|gb|AENW01000056.1| GENE 81 81464 - 82237 651 257 aa, chain + ## HITS:1 COG:SA0865 KEGG:ns NR:ns ## COG: SA0865 COG0061 # Protein_GI_number: 15926595 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Staphylococcus aureus N315 # 1 257 1 262 269 182 36.0 5e-46 MKYSVVAKKDAKSHAVEEKIKERLQSSGWIYDKAEPQLVICVGGDGTLLYGVHQYLHRIS EVNFLGIHTGTLGFFTDYTEEELEECLHDVLEKEPVIFESGLLKIKLDNNPNPYYALNEM RVENIVKSQIMDIYVDGEFFETCRGSGICLSTQAGSTAYNRSLGGAVIDCGLSLMQLAEI TAIQHSKHRSLGNPYIMMENRHVTMKSETFDTAILCYDHLNVPLEATKEIYCEMSDRKVR FARYRHYSYLRRLKNLY >gi|312954207|gb|AENW01000056.1| GENE 82 82512 - 83732 1110 406 aa, chain - ## HITS:1 COG:lin2521 KEGG:ns NR:ns ## COG: lin2521 COG0772 # Protein_GI_number: 16801583 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Listeria innocua # 13 399 10 379 391 195 34.0 2e-49 MKIGLSRAKSPDKFDFVLVTYLILMIGMSLLSIYSAFGIIGQAAGIDYMMKQAMWFIIGS IAIGVIMYLGNDSMLQFAKIGYWFLMVCLVVLLIGKVYNMLTGGSLLGMIITTNGATSWF KLGPFGSFQPSEFMKIVLILITAGVIDEHNNNKLTESYEMDFSLFMNVAKWAVPPILLIL AQPDTGVVLIIAISLVAMIVCSGIKKQWFVIIGILIVIVLVLFFYMYYYHFNVLNELIGG EGGYRLKRITAWLNPETDINGEGHQLYMALLALGSAGLTGHGMGIELVSIPEAQTDFIFA VIGQSWGLIGTLFIVVLCLGLDIHLCRIASMSKNMFEKYFILGILGMLLYQQIQNIGMII GLLPITGITLPMISYGGSSLLSYLIAFGIIMNASAKAKKLSDYVYE >gi|312954207|gb|AENW01000056.1| GENE 83 83957 - 86488 2711 843 aa, chain + ## HITS:1 COG:lin1440 KEGG:ns NR:ns ## COG: lin1440 COG0249 # Protein_GI_number: 16800508 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Listeria innocua # 7 842 4 859 860 763 46.0 0 MTKKATYTPMMKHYLELKEQHEDAIIFYRLGDFYEMFFEDAKTASSELDLVLTGRNAGVE ERVPMCGIPHHAAKGYIQRLIQKGYKVAIVEQLEDPALAKGLVKRDVIKIVTPGTIMDEV SDEKTTVYIASLHDFQFGLAVILCEMTTGELRAQLIDKHVMAIQKVLLGNNVREIVIQEK FDKKIVKMIEEMQTITVSFHNDNALKEEYRHLLNGIEDDRVETAFGVLTNYLDETQKRNM AHLNAVEMVYENDFLQMDFSTKQNLELTSSLRSNSRSQTLWSFLDKCRSSMGSRLLKKWI EYPLVDTAMINRRLDAVEYLNDNFITKDELREHLGFVYDMERLSARVAYGSANPRDILRL IKTLEHTPQIFELFHDCSAYEEFQSIDPCRELYDMIEGAIIDNPPLTLKDGGVFVEGYNE ELDQVREIGKNGKNWILELENKERERTGVKSLKIGYNRVFGYYIEVTKTNLDSIKDEFGY VRKQTLTNAERFITQELKDKEDAIVHAQERSIRLEAELFNHLLNQIKVYLPKLHDLSHAL ATIDALYALAEISSENGYTRPQFHTGHSIHMKEARHPILDRMMKTTRYVSNDLEMGEDND ILMITGPNMGGKSTYMRQTVLLVIMAQIGCFVPAKKAEMPIFDQIFTRIGASDDIMSGQS TFMVEMIEANNALQNATANSLILFDEIGRGTSTYDGMALAQAMIEYIMRNIKAKTLFSTH YHELTEMAEKNAGIRNVHVDVHEEDDKVTFLYRVLDGKADKSYGINVARLAHLPSSVLER AKQILDNLELQPNMVKEVKPPLVIEKENPQHMQIINQVKQVDVNKMTPMEAMQFLYELKE KMS >gi|312954207|gb|AENW01000056.1| GENE 84 86549 - 88636 1789 695 aa, chain + ## HITS:1 COG:BH2368 KEGG:ns NR:ns ## COG: BH2368 COG0323 # Protein_GI_number: 15614931 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Bacillus halodurans # 1 694 1 635 637 438 38.0 1e-122 MGRINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDD GDGMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLLRTNDGTSST EVEINYGKLISARPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSH PEIGFCLSHDGRTVFKTKGSGNLLEVLMQIYGRDSAKSAISLDGSDQDYKIKGYIMQPQF NRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLLMDAQLVDVNVHPS KWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITKETVKEKVEEQELQFTYERDDSIS RLHEEVNDSFIHPEKNEKPSLDMEELRRKIEADKNRRKESAAPIQPKTKELLPEIREETA SYEPEDSTSVKAVTEEADVKVQHEDTDKTEVLPAAHTGSEAHTEAIETDISSDAAVAYKE ISQSEELVYEKKAEVEQPQPLNPSLPQLRVIGQFHSCYILAEGEKGLYIIDQHAAQERYH YEIIRKQILDGNNDTQPLLLPITIESTISAVSQADDLNALLEQLGIHLEVFGDHTFVCRQ LPLWMKDVEEEAFLCDMIDIWEKDKEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRV IEDLAHCEQPFHCPHGRPTMICMEDKALIHEFERG >gi|312954207|gb|AENW01000056.1| GENE 85 88769 - 89680 845 303 aa, chain + ## HITS:1 COG:BS_miaA KEGG:ns NR:ns ## COG: BS_miaA COG0324 # Protein_GI_number: 16078796 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Bacillus subtilis # 2 284 6 291 314 261 48.0 2e-69 MEKVLVIAGPTGVGKTSLSVELAKACHGEVISGDSMQVYKEMSIGTAKITKEEMQEVPHY LIDFCSFTEEYNVKIFQEKAREYIAEITKHGHLPIICGGTGLYIKSCLYDYQFVDQPQDT EFMNFLAERSTDEIWGMLSVIDPKACENLHPHNRQRIVRALAMAHTGEKKSEIVESQEHR PVYDAYIIGLTMDRSRLYERINARVDTMMEQGLLQEIEQLHTLQEDVWSLQSFQGIGYKE WKAYIEDRESVDTCVERIKKNSRNFAKRQYTWFRNQMQVHWYDVEDENYREKILEDVKAW MEN >gi|312954207|gb|AENW01000056.1| GENE 86 89682 - 90422 704 246 aa, chain + ## HITS:1 COG:BH1255 KEGG:ns NR:ns ## COG: BH1255 COG1179 # Protein_GI_number: 15613818 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Bacillus halodurans # 5 239 11 253 259 198 47.0 8e-51 METPLQRMELLIGENNLEILKRSTVMVVGVGGVGSYAAEALARSGVGTLILVDGDTVAPS NLNRQIHAVYATIGRSKTEVMKERMESYRRDCTIICKDIFYKEEENAVLFDKPVDFVIDA IDTMSSKLSLITYCLKHKIPFISSMGMANRLDPTKVECCELMKTSYDPVAKIMRNLIRKH HIKGKIPVVFSSEKPSVQTKIINENGVTRKQKMPPASSPFVPSAAGLAAASYAMRILLEK GEHHGQ >gi|312954207|gb|AENW01000056.1| GENE 87 90412 - 91191 796 259 aa, chain + ## HITS:1 COG:lin2216 KEGG:ns NR:ns ## COG: lin2216 COG0778 # Protein_GI_number: 16801281 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 3 237 2 231 243 110 33.0 2e-24 MDNETLKVIRSRTSLRTYDAKPLREEEENAIIESALLAPTAGNQMLYSMIIIRDQEKKKK LSKLCDYQMFIQDAPLVIVFVADHHRWFDYYRMNGVKRYAEKHGLSFTSPAEGDLMLAVE DAMAAAQNSVIAAESMGIGSCYIGDILENYETVKDLLQLPDETFPIAMLCYGHYKQEHKK VFRKRFDRRFVVFEDSYRQLQKEEYEQMFAERAEKEFLTQNKYAAKNYAQQFYARKTGAS FSKEMTRSVKEALKAWTGK >gi|312954207|gb|AENW01000056.1| GENE 88 91260 - 92075 250 271 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCEATAAMVEKLRIWLEGTDIQINLIPYHQLPSDKKNLRKCENCFIDVYDRGRKIDTVPL HKQQLYAALQIERNAEDEEPVFSKWNGLTEEQFKNCLHKDEISFIPITKHNYLREMSMCL TNYPFGNPSEQYHQSCISLKSKVFSEIWQKEDIAGIFAVLNDRVIGLLEVMPREILQKYG YMTGTAGNSDSYLTIGCYEVGYGVPRVEMLDALMENLEKVYPLFHRKYLEGIGIYEWRDG FNPYWVYEKHGYSRTEKLADNIIVMSKKLCK >gi|312954207|gb|AENW01000056.1| GENE 89 92395 - 92733 384 112 aa, chain + ## HITS:1 COG:lin1176 KEGG:ns NR:ns ## COG: lin1176 COG1695 # Protein_GI_number: 16800245 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 101 1 101 103 108 57.0 2e-24 MDEKLRRVYVPMTETGFYILFSLQEERHGYHVIQYVKKITDNEIIISAGTLYGTLSKMEK DQLIRFTREEEKRKYYQITELGSTVLQLELARINRLYINSKGGCYHGNKENL >gi|312954207|gb|AENW01000056.1| GENE 90 92711 - 93271 506 186 aa, chain + ## HITS:1 COG:no KEGG:smi_0351 NR:ns ## KEGG: smi_0351 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 100 1 106 191 89 46.0 8e-17 METKRIFRFFSLAEYGEEQKFLEEMHQKGWKLKSYTVFRGYVFEKCIPENWIYQLDYRDE VEDLNAYIQLFQDCGWEYVMMFNSFYYFRRKENGEENNSEIFSDRETRREYCESIYKRSV FLTLFCAIIFSIIIVPGLWKALQMFERDPWFLVVYSLISGIMLFELLFLIKCTLKLYAAK KEQEST >gi|312954207|gb|AENW01000056.1| GENE 91 93453 - 94103 608 216 aa, chain - ## HITS:1 COG:CAC2121 KEGG:ns NR:ns ## COG: CAC2121 COG0325 # Protein_GI_number: 15895390 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Clostridium acetobutylicum # 6 215 7 219 221 165 45.0 6e-41 MDKKKLQEIQKHLPDHVTLIAVSKTHTKEEIDEAYACGCRVFGENKVQELKEKYDDRYQW HMIGHLQRNKVKDVVPLADMIQSLDSLRLAEEIEKQCAKIDKIMPVLIEVNISREANKTG VYMEECPAFVKQCMQYKHLDVQGLMCVGPLDADRDRIEECFERMNILFHKLQSEYGSEQI RYLSMGMSDDYPIALKHGSNMIRLGTVIFGKRNYSI >gi|312954207|gb|AENW01000056.1| GENE 92 94840 - 95472 804 210 aa, chain + ## HITS:1 COG:BH0042 KEGG:ns NR:ns ## COG: BH0042 COG0125 # Protein_GI_number: 15612605 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Bacillus halodurans # 1 199 1 201 210 221 57.0 1e-57 MNKGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPGGIDIAEQIRSIILDPANT AMDERCEALLYAASRRQHLIEKVLPALKEGKIVLCDRFVDSSLVYQGIARGIGVEEVFAI NQFAIEGHLPDATVFLSVDFETGLSRVTSRGNKDRLDNESMEFHKLVAQGYELIKDKFKE RMHIVDANPDVDTVLNNTVACLMEIIKNHV >gi|312954207|gb|AENW01000056.1| GENE 93 95465 - 96442 1040 325 aa, chain + ## HITS:1 COG:BS_holB KEGG:ns NR:ns ## COG: BS_holB COG0470 # Protein_GI_number: 16077099 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Bacillus subtilis # 6 322 8 328 329 177 36.0 3e-44 MFKDILREQQPVVYHTLRNALEHNRLAHAYMFSGPSGTPKKETAYLLAQSLVCRESGFAC EVCDTCERIAHNEYADMIYLDGTSVSIKKDDILKLQHAFAKTGLEKTGKKIYVLDHAENA TPDALNSLLKFLEEPGSDMIAILIVEQLDRVLPTIISRCQNIPFTPLSASQCHAAVQEDL EALDAYLLSSMIRQKSEILEASESEDYQHARFLMKGMLERYLSSPYDALLFLQLEGFPSK QKKHGKQAMLYLLDMLTIFFRDCLRGSRRQSDTWYQNMLKEYQKKNMDMAAILQILMQTK DTLLRSVNLQLLVDQMLYRMKEVTE >gi|312954207|gb|AENW01000056.1| GENE 94 96439 - 97509 1209 356 aa, chain + ## HITS:1 COG:BH0045 KEGG:ns NR:ns ## COG: BH0045 COG1774 # Protein_GI_number: 15612608 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus halodurans # 91 333 3 247 275 211 45.0 2e-54 MNQSEDRNGISKGNPNPKQDKKKHHDRGFEQKRDMKHHPKHDGKPNMKSEAKEPRQEVKK EMKQEQRPAQKPEHKKANHNERKPEGRVYKYIAFVSFKDSKKIYTFGTDVDEYRVGDDVV VETIRGLELGKIVKETETFLSNGMEIKPITRKATERDLKQAQENIEKAGKAMEICAECIR KLGLDMNLIEAEYTLDCSKIIFVYVADERVDFRELLKELASIFKCRIELRQIGPRNKSKI IGGLGTCGMETCCSRFMNDFDVVSINMAKNQLLALNIQKLSGQCGKLMCCLKFEDSQYKR LREGLPKMNSQIEYKGSRYRITSMNVLLQQVKIENKEDVQFLSFKELWPDIDFSDR >gi|312954207|gb|AENW01000056.1| GENE 95 97519 - 98376 1095 285 aa, chain + ## HITS:1 COG:BH0049 KEGG:ns NR:ns ## COG: BH0049 COG0313 # Protein_GI_number: 15612612 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Bacillus halodurans # 1 282 1 287 289 253 47.0 2e-67 MNRQKSFENEKATLYVVATPIGNLQEMTPRALKVLESVDVIAAEDTRNTLKLLTHFGIHT RLISHHQHNEAQSANGLLELLRQGQDIALVSDAGYPLISDPGCVVTQKVIEEGFNVVPIS GSNAMLNALVSSGMDTRHFLFYGFLKSGEKERIRELYELKYYPFTMVFYEAPHRVKKMLA SCLEVLGNRNICLARELTKKHEEFLRGTIEEILEIAEELKGEMVIVMEGSRETKDPGEDS AMPLVHEQINTYIKEGLTTNEAIKRVARERGLSKNEIYKQYHGLC >gi|312954207|gb|AENW01000056.1| GENE 96 98486 - 99181 624 231 aa, chain + ## HITS:1 COG:no KEGG:Cbei_2690 NR:ns ## KEGG: Cbei_2690 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: C.beijerinckii # Pathway: not_defined # 3 230 9 230 230 99 30.0 8e-20 MNLTKEPCLYADMLQCRNAGGLVLYETETALLLQGRISKILYSAAADNQAGKEIVEHLPK QFGILVAHDTYTDPWLKSMRKLESELECVHCVYVEDVPPAVALPEGFVINRLDASHTQKI IALYRHSMESLANEQYIGECLQDGMYGAFYKGELCGFIGVHEQESIGILEVHPKWRRKGL AVALEQVMIGKQLERGRLPYGEIVKDNTASIRLQKKAGMITDEKLTYWYFP >gi|312954207|gb|AENW01000056.1| GENE 97 99246 - 99926 944 226 aa, chain + ## HITS:1 COG:BH1580 KEGG:ns NR:ns ## COG: BH1580 COG0745 # Protein_GI_number: 15614143 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 2 226 5 237 238 219 47.0 5e-57 MSKLLVVDDEERIRSMIRKYGEFEGHEIEEAVDGMDAIEKCKQAEYDLIIMDIMMPNLDG FSAVKEIRKDVQTPVIMLSARGEEYDRIHGFEIGVDDYVVKPFSPKELMMRVSAILKRYH GDVNTRKKDIYTYEGLKIDFTARKVFIDDKEVEMSPKEYVLLFYLVRNEGIALTREQLIH DVWGYDFYGDDRTLDTHIKLLRKSLQDYSRLIITLRGVGYRFEAEK >gi|312954207|gb|AENW01000056.1| GENE 98 99910 - 101553 1730 547 aa, chain + ## HITS:1 COG:CAC2434 KEGG:ns NR:ns ## COG: CAC2434 COG0642 # Protein_GI_number: 15895699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 191 537 125 489 492 164 31.0 4e-40 MKLKNKQVAGVDRKERKPISVKWKIFVTLVFFIVIIIAVLWFFQVFFLEKFYMFIKSNSV KKAASEVNEVITQKLDGSLDMESYKTKISNISRNGDFCVIVYDEDTSKDPIMGNESDGKC MLSKSASYAAHADVIDELKGEALSQKDGIASRLIEDTAKVEVPFESFRFSLTKEGLMIPR PEAFPSRLTSDIRDNGRNKQNMKISKGVQNMTYISVVTGSNSHMKISVINAQLTPVNATI ETIKTQFIIIAAILTVVALMLAFYLSRKIARPIISINNGAKTLATGQYDVAFSGKGYLEI EELSNTLNYASRELRKVENLRRELIANMSHDLRTPLTMISGYGEVMRDIPGENTPENVQI IIDETKRLTNLVNDMLDLSKLQAGVQELHAVSMNLTDEIRSIIERYETLLKQDEYDIRFE YREDVIIQGDVIKLDQVIYNLINNAINYSGEDHQVIVKQLLELGRVRIEIIDHGPGIEKD KLAYIWERYYKVDKTHVRSRVGSGLGLSIVKAVLELHKAEYGVLSEEGVGSTFWFSLPYS KSQNEDG >gi|312954207|gb|AENW01000056.1| GENE 99 101953 - 104298 2705 781 aa, chain + ## HITS:1 COG:CAC0480 KEGG:ns NR:ns ## COG: CAC0480 COG1328 # Protein_GI_number: 15893771 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Clostridium acetobutylicum # 4 781 3 695 702 511 40.0 1e-144 MITSIKKRDGREIHFSPEKITRAIFLAASRVAQEEGSKADYETAEILTEKVVNLLNNTYQ GTTPTVENVQDAVIKVLIETGHARTSEAYILYRAERTRIRSMKTRLMKSIEEITFADSND ADIKRENANIDGNTAMGTMLQYGSAVSKEFCMSQLMNPQHAALHENGDIHIHDMDFMNMG TLTCCQIDLEKLFNGGFSTGHGHLREPQDITSYAALAAIAIQSNQNDQHGGQSIPAFDFY LAKGVAKTFRKEYISNLNKALELFINLDADVREPFKAVEKETGKTAAMIMDDSFLNSLNA MLKETFGLGEEQIELINKFAYKEANVATRRKTYQAMEAFVHNLNTMHSRAGAQVPFSSIN FGTDMTPEGRLISENLMLAQEAGLGNGETPIFPILIFKVKEGINYNPEDPNYDLFKLAMR VSAKRLFPNFSFMDAPFNKQYYKEGHPETETTYMGCRTRVMGNINGPEIATGRGNNSFTS INLPRLGIKHGVAVNGDFNEAAFFNELDEKMEIVIQQLLERLEIQGRKKVKNFPFLMGQG VWIGSENLSWEDTLEEIIKQGTLTIGFIGLAECLKALIGEHHGESEEAQKLGLKIVGHMR EMCDEATEKYGLNFSLIATPAEGLSGRFTRIDKKIYGIIPGVTDRDYYTNSFHVPVYYHI TAFKKIQKEAPYHEFTNGGHISYVEVDGDPTNNLEAFESIVRCMKDAGIGYGSINHPVDR DPCCGYSGVIEGHVCPKCGRDEREEEYKFEKIRRITGYLVGTVDRFNDAKASEERDRVKH G >gi|312954207|gb|AENW01000056.1| GENE 100 104291 - 104839 726 182 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 10 163 4 165 168 120 38.0 9e-28 MDSKTIRLASPMQEDSFVDGPGVRMVIWTQGCRHHCPNCHNPQTWDTEGGTLYSVEQLQQ QIRDAQLQSGLTLSGGEPFLQVEPLLEIVRTAKEKQLNIWAYSGFTYEELLADERKKRLL VQLDVLVDGKFVNELKDYRLVFKGSRNQRIIDVQKSLQSGSVILSEKDEQNQKLKEEDMI NA >gi|312954207|gb|AENW01000056.1| GENE 101 105321 - 105809 613 162 aa, chain + ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 4 71 3 70 195 58 38.0 6e-09 MKALGTKISELRKARGMTQDELADKMGVSPQAVSKWENDLSMPDLPVLIELSDFFHISLD DFLKEKVQTVELLPEDKRKDIEQMFLRVYVDSENGDRVRVNLPLALVKMARDMGLDIPQM TDNPMMQKIDLGMIMQLIESGVIGKLVEVDSANGDHVEVIVE >gi|312954207|gb|AENW01000056.1| GENE 102 105811 - 106062 170 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIRIHAQSCRLNLRIPDSMLYNMLTCTVIRKTIQENTEIAWTMDKETTRKMMRLLKHFS KEYRGLTIVDVETADGEIVQITL >gi|312954207|gb|AENW01000056.1| GENE 103 106219 - 106662 350 147 aa, chain - ## HITS:1 COG:ZptsA_2 KEGG:ns NR:ns ## COG: ZptsA_2 COG1762 # Protein_GI_number: 15804544 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 EDL933 # 3 142 2 141 146 90 32.0 7e-19 MKLINENLILLDMNLQSKDDIISCIADTLENNQRLCDKQQYIDDVYSREDEISTAMGSSI AIPHALSLGVRHTSLVFLRLQNPIQWDDDQVQMVFGIAVRKENSGNEHLRILSNLARKLM DLGFTNALLHSDNPDGCLQLLEECSIS >gi|312954207|gb|AENW01000056.1| GENE 104 106666 - 107703 1213 345 aa, chain - ## HITS:1 COG:SPy0855_3 KEGG:ns NR:ns ## COG: SPy0855_3 COG1299 # Protein_GI_number: 15674888 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pyogenes M1 GAS # 7 330 2 349 360 233 46.0 3e-61 MNWKKSYNHLMSGVSYFLPFVVGGGIMLACAYLFDFQNANTATFGSSNVFVSWLNQIGGL AMGYMFPIMGAYIAYSIADRPGLLTGMVAGALAANGGSSFLGAVIGGFAAGYIILGLKKL TAGIPRSLEGIKTLLLFPILGLALTSLAMLAINSVVAPVSNALTDFLSGLSGTNAALLGA VIGGMLALDLGGPINKTAYLFSVATLTAADGGTVPSVVMASCGCSAMVIATSCAVACTLF PKKFSENLRGAKIAAYIMGLSFFVEGAIPFVADRPKKILPSLCVGAAVTGALVAMFGITL SAPIGGLETLLLVSNIPLYLLSFAAGTAVAVCMIYFFIRNEPDQE >gi|312954207|gb|AENW01000056.1| GENE 105 107724 - 108038 474 104 aa, chain - ## HITS:1 COG:BH0828_2 KEGG:ns NR:ns ## COG: BH0828_2 COG1445 # Protein_GI_number: 15613391 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Bacillus halodurans # 4 96 2 94 124 106 51.0 1e-23 MKRIIGVCACPAGIAHTYMAAENLERQGKKLGFQVKIETNGSGGVENRLREEDIKEADYV IIAADTRVEMERFRGKKLLEVSVTDAVRKVESVYEKLNDALKEY >gi|312954207|gb|AENW01000056.1| GENE 106 108053 - 110695 2101 880 aa, chain - ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 6 856 8 850 877 328 28.0 3e-89 MKKTAHCIHHTHWDLIWYFTAQDATVQLCYNMKEMLEGFRSGRITDFFFDGQSAPMDEYR KLHPEDEAYIRTLVTEKKLVIGPFHSQLDCFICNGESVINNLRLGMQSAENLGYVSRVAY LPDSFGHSWDFPKIFHQFGIKDFVITRGVGDDYKLGSEFYMKSNDGSELLVCTMIAGYGY GCYAFRNGTLFDESALDYNKISVQSLIDRLLSYSTLDHEFVFPLGFDQNPAMLDIPKRIA EYNAQQTDIAFVSTTWQDFCNRVREHGHNLKCHEHELFSTQYHRVHRSIFSARADIKALQ DACERKITYGLQPLMSMLDAQGIPYDHGLIDEIWNRLLRCQTHSSATLTDETNDYIQQET QNAYNLITSQTVFLMKLLSLSVQKREDGYPLLVCNTLPYTRTQTLHTTVQTGKPDFRILL DGKELPYTRAGTVKKNCGVLRKDIRDMDPKGYFYETEIILQIDHMKGLSYRTLYIQDIDQ PSVSYELAQVPYIENNRFRIHKDEEGVHIFDYRSHREHRSAIYLEESGDEGDSFDYSPPE YDWILTDYFEHAEVSCVQNMTYSCMTLTGTMEIPRNLKNRKDRIRNSGMRYKIKLELIDK NNIRISGTIDNHATDHRVRLVFTGQAPHTYSLAGTQYSYIKRESTPAALKTWKADGWFEE PSPTWPLLNYVSVEDDEVMTVMTKSSKEYELIDEGNKDIAVVLFRSYGAMGYPDLHRRPG RPSGLDYMIFQTPKCQMLKENSFDLALTWYESYDGNRICQDYIQYACPQLCFEGQHFDKS VHPISYFPTNPPEQRLPDSWSFLNMDELQGCFGSLVKEKDYWLLRLYNNEIEPVSCGIIH SDEALVYTLTTLDHTIHKPLSNELEPLRKGELRMIQIERT >gi|312954207|gb|AENW01000056.1| GENE 107 110838 - 110987 74 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEESGYQMLFILGIQLSPSVCVPKEKQKLNLYLFRRIEIDTVWKALGIL >gi|312954207|gb|AENW01000056.1| GENE 108 111030 - 112973 1078 647 aa, chain + ## HITS:1 COG:BH3853 KEGG:ns NR:ns ## COG: BH3853 COG3711 # Protein_GI_number: 15616415 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus halodurans # 1 469 1 472 700 135 24.0 3e-31 MKKTQRWMELLNILVEEQNFQTVAELAEQVAVSSRTIHSDLQDTSFLQLLHGAELIKKPN IGIRLHCTQKQREAIYRQLQKNRFETSVPLEKGNDLHTVLHMLLTYRDAIRMEDLADALY RSKSSLTTVLEEAERLAENYDCRLRKRSNYGLSLEGHEEDIRNLFYRFVDTLPMQGYQHN DLDVRLPDALYEKMKMVFDVQMIRMIIPIVKSSEINLNTHYCDYDFGMLILKCCILLTRC QIDRSVQKQTTISTDLQEYYVATIMKLKMEQTFHVSLPEEEIYYLERVILSTRKQQNQEQ FQELDSAMLDRFIYLVSERLNVDLSEDKQLKQNLCNHMKPAIRRMKYGISSENPLLEAIK TKYTEVYVAIMTTIDKIEEREHIYFDANELGFICLHIVGALNRSRNIRSIRCLLICDAGI TFESYIKSMVETSFREIEIVNIIGSDEMKKETGHQHDLILNATTNRLHASNIINIDHLFT EASCSQIRHWIFAREIKHTLELRTKFDSYLSYFQDSCENRRSLIHKYCTYLEDNGYVTEA FEASVYDRIQYSSTAIGRGVAVPHGTKKAVKNSVILIIKLDHTITWDDQLVDLVFFAAIG EDISTEYSKIFRRIVRIVSDDEQTHMLKSCNSLEEIRKYLFDTEQKA >gi|312954207|gb|AENW01000056.1| GENE 109 113038 - 113406 471 122 aa, chain + ## HITS:1 COG:no KEGG:Patl_3900 NR:ns ## KEGG: Patl_3900 # Name: not_defined # Def: hypothetical protein # Organism: P.atlantica # Pathway: not_defined # 4 119 31 147 158 86 38.0 2e-16 MKELKSYIQSVNTCSDSLIREVWSDQDECSMIFPKGEVEGLDAILASFYHGAMAQYETRD LQQDDVKIQEFCDITIVRFYWTLYATMKDSGEHIMNKGRETQIYRSYPQGKKLVHVHYSR LP >gi|312954207|gb|AENW01000056.1| GENE 110 113504 - 115279 219 591 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 354 561 38 251 329 89 31 2e-16 MEVMKKFISYYKPYKTVFFLDMFCALVISAVDLAFPQILSYLNTTFYIQPKDMIMDSLLL LGEGLLVMYIVRAICRYYVTAQGHIMGARMESDMRQDLFDQFERLSFSYYDRNNTGEMMS KLVSDLFDISEFAHHGPENVFISLLKIIGSFLLLLYIHVPLTLILIAVTLVMLIFSMLQN KKMQATFMDNRRKIAGVNASLQDSLAGIRVVKSFANEDIERDKFSHSNQLFLQSKTNNYY RMGLFHAGNNFFQGMLYLTILVAGGYFIANGTLDPISLATYALYINIFVAPIEVLVEFTE MFQKGYSGFKRFLEVIETEPDIQDAPDAQELKNVQGVIDYDHVTFSYNEEEHVLDDVSIH IEAGRSIALVGPSGGGKTTICSLLPRFYDVKNGAVRVDGQDIRTLTLESLRKAIGIVQQD VYLFTGSVKENIAYGKPGCTDEEIIEAAKKANIHDFIMGLPDGYDTYVGERGTRLSGGQK QRISIARVFLKDPRILILDEATSALDNESERHIQKSLEELAKNRTCITIAHRLSTIRNAD EIIVISENGMEERGTHNELLAKGGTYAKYYHMQFEGLDFDEQTRETLHSRQ >gi|312954207|gb|AENW01000056.1| GENE 111 115455 - 115949 317 164 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITVKMITDDYTAVYNIFSEAVDRSQVFIERKIMNLEKKYRIIKISFIFVSCLFFIVLYA IGTYVSERKEEHRFAKGIRGTYTSADSFTNISLDDEDQLYYLSGDRVSHGTYKKLNEQVF KLLSGHLKDAYIVKDSNGDIILIEQDTSAARFKKYDNQITIVSE >gi|312954207|gb|AENW01000056.1| GENE 112 116115 - 116882 612 255 aa, chain + ## HITS:1 COG:ECs3804 KEGG:ns NR:ns ## COG: ECs3804 COG1072 # Protein_GI_number: 15833058 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 # 6 242 3 236 237 195 41.0 6e-50 MGIRMLTINVNGYDIQAKYREEDIKTVFMPFLQHVIQLQKESGKRLIVFLAAPPATGKST LAIALCQFARELGCMDMQYAGMDGFHYTNAWLDNHFQDGKKLKELKGAPETFDAEAMYAL IKETKGSDTWWPVYDRNLHEPLKHRLHITGSILLVEGNYLLLDEKPYRSLSALCDYCVFI QAEENLLRDRLIDRKSRGGLSKEQAEVFYEKSDRCNVQRVLHNRLNSDEVWKLCTDGGYR LISRSFDESWQTFCE >gi|312954207|gb|AENW01000056.1| GENE 113 116836 - 117600 630 254 aa, chain - ## HITS:1 COG:no KEGG:ACL_1027 NR:ns ## KEGG: ACL_1027 # Name: not_defined # Def: integral membrane protein # Organism: A.laidlawii # Pathway: not_defined # 1 217 1 222 269 74 27.0 4e-12 MENFLNATAWTMAEPKPYGLFHIVMLLVGIPVSIALAWKLRRVSDRSYHRILFAIAVILL LSELYKQLFHFYVMDNKTYDWWIFPFQLCSLPMYLCAILPFMKKSRWLIPLETFLMDFNL LGGLMALLVPDGLMHPYITLTLHAFVWHFLLLFVGFFIGFSRHGDTSLSGFIKTLPILLI CIGAATLLNVLFHSYGDINMFYISPYKITTQPVFSQIMKRTGIWIGNLLYITAMCITAFL IHRMFATIRRSCEK >gi|312954207|gb|AENW01000056.1| GENE 114 117930 - 118871 568 313 aa, chain - ## HITS:1 COG:slr0959 KEGG:ns NR:ns ## COG: slr0959 COG1266 # Protein_GI_number: 16331018 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Synechocystis # 153 242 436 526 529 62 35.0 2e-09 MEHEPYLEEEHKDQLCKKDCKRIAGSLLFYYILLFACAFTLGIISSAYIMSGASQTELET ITNIFSMIATCFVTILTLVIYKKKLHVTIPYSLCKEWNFLSILRYTIIAMGLSGAAGILI QLINQILIHFGWVMTTPDFSMKPDITYNLSIVLSACIIAPIMEELLFRGLILQTLKRYGN VFAILVTSLLFALLHGNLPQSVPVFALSMMICYVVLKSGSILPGIAIHFLNNAFAIMEVS LLSDNGQISTVFLILEALFLLYAMFTLYQKRLIIRNYIIHNRGSRVRTFFSNWISILFLV LCVFIMITSFQRT >gi|312954207|gb|AENW01000056.1| GENE 115 118883 - 119731 1082 282 aa, chain - ## HITS:1 COG:CAC0893 KEGG:ns NR:ns ## COG: CAC0893 COG0287 # Protein_GI_number: 15894180 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Clostridium acetobutylicum # 5 278 7 282 286 209 41.0 3e-54 MIQENTRFLIVGLGLIGGSYAMGLKKNGYHVDAIEINQLSIDYAIKHNIIDRGSTFDIDY IKEADIIISGLYPNMTVDWITTYQKYFKPGALITDVSSVKTGVVEPIQKIIRRDVEFISS HPMAGKEVSGVKFADDSIFHIANFIILPTESNTKEAVATMRQFAEILGFSNISELTVAQH DEMIGFVSHLTHAIAVSLMNTNDNTHLVEYTGDSFRDLTRIAKINENLWSEVFFLNKENL IREIDDFIQEVNHLKATLEQDDVDGLKELFIQSTARRKLFDR >gi|312954207|gb|AENW01000056.1| GENE 116 119728 - 120990 1173 420 aa, chain - ## HITS:1 COG:CAC0895 KEGG:ns NR:ns ## COG: CAC0895 COG0128 # Protein_GI_number: 15894182 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Clostridium acetobutylicum # 5 417 6 421 428 324 42.0 2e-88 MKAHVAPSICSGHVVIPPSKSMAHRAIICASLANGTSVIKNVAYSQDIKTTIAGMQQLGA DIRMEADQVTVTGIKDFTIKNKEVFCCESGSTLRFFIPIFSLCNQEITFTGQGRLLQRPQ KVYEDLFHAQGLTFRQDASGITIRECLKSGDITLQGDVSSQFISGLLFTLPLLQEDSTIH ILPPFESRSYVDLTLQMLKTYGIQASFEDDLTIHIPGNQQYTACDYTIEGDYSQLAFFAV LAACNHDLTITGVHHDSRQGDKKILSILKDFGVRIEEVKNGYHIYKSSLHGCRIDLADCP DLGPILTVLAMYSPGNTNIYNAGRLRIKESDRIEAMEQELRKFGVDIHSTEDEIFITGNS SYTCASELSSHNDHRIVMALSVAATCSNTSCIIDGAQAIQKSYPTFFEDLQSIGGKVELL >gi|312954207|gb|AENW01000056.1| GENE 117 120991 - 122007 1151 338 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 336 1 335 337 392 60.0 1e-109 MIITMKKSATKADIEHVMKQLKDKGLQIHESIGENLNVFGVVGDTSQVDPKRIEANKHVE SVVRVSSPYKKASRMFHPEDTIVEVNGIHIGGKEKIVVIGGPCSVEGKDMICHIAHEVKD AGGVMLRGGAYKPRTSPYAFQGMGTEGILALAQARKQTGLPVVTELMSADKLDEFVEHVD VIQIGARNMQNFDLLKAVGKTNKPVLLKRGLANTIEEWIMSAEYILSEGNTNVMLCERGI RTFEPYTRNTLDLSVVPIIKKKTHLPIIIDPSHATGDWELVEAASLAAIAAGADGLIVEV HDHPECAWSDGAQSLKPDNFKELIRKGKAIAGVIGRAM >gi|312954207|gb|AENW01000056.1| GENE 118 122051 - 123148 1140 365 aa, chain - ## HITS:1 COG:CAC0896 KEGG:ns NR:ns ## COG: CAC0896 COG0082 # Protein_GI_number: 15894183 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Clostridium acetobutylicum # 1 353 1 354 356 360 53.0 2e-99 MKNTFGHNYSVTIFGESHGEAIGCVIDGLAPGIKLDMDFIASVMEKRKAKGRISTQRKEA DELHIVSGYFNGHTTGTPLTILIENTNTRSHDYEKTKYRLRPSHADYTANEKYMGWQDYR GGGHFSGRITAPLVAAGAIAMQVLKEKGILIGSHIQKSRTIEDIPFSENIEELQKQVERV NTMDFAVLDDTAAADMKAMIEEAANEGDSVGGILESCILNVPAGLGEPFFDSLESTLSHL LFSVPAVKGIEFGLGFGFSDVYGSEANDPITYDKGFHTATNNNGGINGGISNGMPIRIRT VIKPTASIYKEQNTVDLKTHEAVKLQIQGRHDPAIIHRARIVVDSVLAIGILDQLMERSA TLTMK >gi|312954207|gb|AENW01000056.1| GENE 119 123145 - 124158 1461 337 aa, chain - ## HITS:1 COG:SP1375 KEGG:ns NR:ns ## COG: SP1375 COG0337 # Protein_GI_number: 15901229 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 332 1 353 355 234 39.0 2e-61 MKLHVDLKENGYDILMEHGILYRLNDYIDLNRKVMIVTDSGVPEAYANIVREQCKKGYVH VIEQGEDSKDLAVFKEINEDLLAHKFSRKDCVVALGGGVVGDLAGYVAASYMRGIDFIQI PTTTLSQIDSSIGGKVAINLDEVKNIVGAFYQPKMVFIDPETLHTLPRRHYINGLMEALK AGLIYDASLFALFEHGDIEKDLDTIIEKALYVKKSVVEQDEREQGLRKILNFGHTIGHAI ESYYHLSEYLHGECVALGMLYFIEDEQLKQRVISVYERLGIPTHVDFDPEAVYQLLCRDK KADGDHVTIVHVPKAGTAELIETPLDEVRTILKGTQA >gi|312954207|gb|AENW01000056.1| GENE 120 124616 - 125701 1106 361 aa, chain + ## HITS:1 COG:SSO0246 KEGG:ns NR:ns ## COG: SSO0246 COG0077 # Protein_GI_number: 15897191 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Sulfolobus solfataricus # 87 353 1 260 269 140 34.0 3e-33 MSLLDDARKRINAIDEEMAKLFEQRMQAVEDVIRYKQAHQMKVLDTSREQYVIEHNTAFI QREEYRDSYIEFISEMMAISRKYQRSIINRDLIGYSGTEGAFSHIAAERVFLDHRKKSYA SFEDVFHAVTEREVAYGVIPFENSYTGEVGEVLDLLMRYDVYINDIYDLQISQNLLGVKG ASLADIKQVYSKDQAIYQSKKFLEGRGYELIPYPNTALAAEYVAKENDKSKAAIAAKENA ELYGLDILAEDINTSEQNTTRFIIISKQLIQQGNRFSLAFTTHHKAGALVHAMNIIAQFG FNMQSIKSRSIKERPWEYYFYVEIEGNLKDAKEQHLIHDLKEACEEVKILGAYQNDERKQ G >gi|312954207|gb|AENW01000056.1| GENE 121 125704 - 126939 1272 411 aa, chain + ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 15 411 13 414 415 253 35.0 6e-67 MSFVKQNVNKAPIEDTVFAIVKKAKEAKAAIGAEQVVDATIGSLYNEEGNIVAFDSVFTP YNEIAKETKATYAASFVGNDSFRKQVYEWIVGGTGSTLVHSVIATPGGTGAVAITMQEIL DEGETVILPEIAWGSYRLMATMDNLKVKTYSLFEGDHFNVESLKEACREVMKTQKKLLLV INDPCHNPTGYSMSMEEWQEIVAFLNECGKEVPVVLLNDIAYIDFSYDLEHCRNYIKTFN DFSENVMAVIAFSCSKALTSYGLRCGAAILLAQTKEAVRDVEIVFEKAARATWSNVPNAA MENFTYVTTTNYDAYMKEKAMYVELLKKRSDIFTEEADACGLDYYPYKEGFFVTVRIEDN ALRDVFHESLMKQHIYTVKVNKGIRVAVCSLSSEKCRGLAKRMKEILDTCK >gi|312954207|gb|AENW01000056.1| GENE 122 127543 - 128466 822 307 aa, chain + ## HITS:1 COG:no KEGG:CA_C2550 NR:ns ## KEGG: CA_C2550 # Name: not_defined # Def: hypothetical protein # Organism: C.acetobutylicum # Pathway: not_defined # 1 302 1 303 320 284 44.0 3e-75 MILFVSGRCDIPAFYSTWFFNRLQEGFVDVRNPFNPHQISRIYLNEQNIDGILFCTKNPI PMMNRLEEVPFLYQFQITLTPYHEDIEEHVASKKEIVNAVREMSLRLGKDRVIVRYDPIL LTPKYTVEYHRRAFEKLCSQLEGYVDTIIISFVDMYKNTAGNQKRMQLQEMRRQDMLDVG KALGSVAERYAVHIQTCAEDIDLSPYHIHKGLCMDRKKLERLVQHSLDHIQGKGVRSVCG CMPTVDIGDYNCCPHGCRYCYANYNEKQIAERMKLHDPQSSVLLGHLDEEDKITIREDKH IRQISLL >gi|312954207|gb|AENW01000056.1| GENE 123 128633 - 128875 58 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIDEGYYYVDKTLFIKEVLNEKVALYTRPRRFHRIVSRYLWYPTRGALVAGKTLNMSRRC PPRRAILFLFYERERECVSF >gi|312954207|gb|AENW01000056.1| GENE 124 128976 - 129194 146 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQIEKFSSIISDIVNANSELLNSPMLNTAQKNLLTQYQNETSTISNLMDALFKISICMQL HFQKKVIILIDE >gi|312954207|gb|AENW01000056.1| GENE 125 130188 - 130688 535 166 aa, chain + ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 4 161 1 158 162 161 55.0 6e-40 MSEIKPVVSILMGSRSDLPTMENCFNQLKEFGIPFEAHALSAHRTPNEVIKLAEGAKDRG IKVIIAAAGGAAHLGGVIASSTTLPVIGVPIQTSALGGMDSLLSTVQMPGGIPVATVAIG KAGAKNAAILAAQMLALSDEAMAEKMVAFKASMAEKVIKDSVIEVE >gi|312954207|gb|AENW01000056.1| GENE 126 130706 - 134401 4262 1231 aa, chain + ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 4 946 7 967 985 951 51.0 0 MNYRVFVKKKEAFQVESASLFHELKQNLNLAGLQGVQMYNVYDVFHGDKHDMELLKEKVL SEKVTDEVFDEIDLKGKTFIAYECLPGQYDQRADSAQQCLMLLNNKQDVVIKSGRIVILE GSVTDEEIQAVKKYLINPVEMREKDLAVLGYEEDVEIEPVPVLSGFRDLDEAGLEALRSE QGLAMTLADVQHIQKYFREEEERDLTLTELKVLDTYWSDHCRHTTFETILQNVKIDAGSL QDTIQKAYELYLKLRKDVHDNKKFVTLMDMATIAGKYLRKTGKLDDMEISDEINACSIEV TVDVDGEDQQWLLMFKNETHNHPTEIEPFGGASTCIGGAIRDPLSGRSYVYQAMRITGAG DITKDIKEALPNKLPQSRISKGAAAGYSSYGNQIGLATTYVKEIFNDGYVAKRMEVGAVI GAAPKENVVRKKPETGDIVVLIGGATGRDGVGGATGSSKEHNDTSLTKCSSEVQKGNAPI ERKLQRLFRNPKATKLIKKANDFGAGGVSVAVGEIADGLRIDLDKVPVKYSGLSGTELAI SESQERMAVLIEADKFEEFKQLAYEENLDSCIVAVVTEERRLVMSFHGEEIVNISRDFLD TNGVRGLQDVLIREGLSDTDPFHSKVTSVEENLKQPNVASQIGLAEMFDASIGKSTVLMP FGGKYQLTETEGSVQKLPVFGFTNTCSIMTHGYHPELSLYSPYLGASYSVVEALARVTAM GGNYETCRLTNQEYFERLHTDPEKWGKPMQALLGLIEAEMAFETPAIGGKDSMSGTFNDI SVPPTLITFAVTTEKTEHIISPEFKEAGHHIYYIKHTPNDNQTPNYEELKANFAKVRELI RKGVICSAATVKFGGLAEALCKMSFGNKIGVEVKTSEHIFDLSIGSIVVESSEAIYDEAF VLLGKTTDADTICINEECITIDKAITAWCERYNTMYPMTVDQEKGVIETPEYTANERVHA KKTIDKPKVIIPVFPGQNCEYDTKQQFERAGAEAEIYVFNNLNVESIERSLKELSEKIAS AQILMVVGGFSSGDEPDGSGKFIANVLSNPSVNKAVQTLLANDGLILGICNGFQALIKSG LLPYGDITKLSEESPTLFRNNINRHVSHMATTKITSNKSPWLSSFTPGQGHSIAMSHGEG KFVVSDEVAKQLFENGQVATQYVDLDGNPTMNGTYNINGSSYAIEGITSLDGRIFGKMGH SERYEDGLFKNIDGDKYQNIFQNGVNYFRNK >gi|312954207|gb|AENW01000056.1| GENE 127 134480 - 136075 1944 531 aa, chain + ## HITS:1 COG:BS_yuaG KEGG:ns NR:ns ## COG: BS_yuaG COG2268 # Protein_GI_number: 16080153 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 22 477 15 493 509 209 33.0 2e-53 MRRRGAIMDIQSLLPYIGGAIVIILLLLIVTIGYVKAPPDTAYIISGLRKKIIVGKASIK IPFLERLDKLSLKLIPIDVKTSSMVPTADYINIQVDAAVNVKVGSDSNKLELAAQNFLNQ NSDYMARVAREVLEGNMREIVGRMRLEEMVSDRQKFAELVKENAMPDLAAMGLNIVSFNV QNFTDANGVIDDLGIDNISQIKKKAAIAKAEADRQANDARVAAEREIAIKNNDLSIQKAE LKKVADVKQATADAAYEIEKENQRKTIEVTSADANIAKQEREVLLKSKEAEVKEKALEAE VKKQAEAEKFAVQQKADAELYTRQKEAEAKKFEIQQEAEAQRAKADADRYSREREAQGIQ LVGEAEAEAIRAKGIAEAEAMDKKAEAYQKYTGAAVAEMLIKVLPDVAGKIAEPLTQIDK ITVIGSGNDSSSIDSVAGNVPGVMTKLFESMKETTGIDLGEIVRANTYDAKVTRNVNFSG IPASDNDTNVVVQAADSVRKQDEKKPEKPVKPVEEKPVKKKADNDKMSWEK >gi|312954207|gb|AENW01000056.1| GENE 128 136097 - 137128 773 343 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 [Marinobacter sp. ELB17] # 5 333 10 333 354 302 44 9e-81 MSDKYREAGVDLEAGYESVRLIKSHVARTKVKGAIDSIGAFGGMFDLSVLNMKEPVLVSG TDGVGTKLLVAFEMDKHDTVGIDAVAMCVNDVLVQGAAPIFFLDYLAVGKNEPKKIEQLV KGVADGCVQAECALIGGETAEMPDMYDVKHYDIAGFCVGAVDKCNLLDGQKIKEGNVLIG LPSTGVHSNGFSLIRKVLLKDAKLDLHKEYEEIGNQKLGDVLLTPTKIYVKAIKHLLGKV DIKGMSHITGGGFYENVPRMLKEGQGVTIDTTAYPHKPIFDMIAKYGNIPMDEMCNVFNM GIGFMMAVDKKDVDTVQSLLKEIHEESYVIGEVTNSGSVDVKW >gi|312954207|gb|AENW01000056.1| GENE 129 137122 - 137709 675 195 aa, chain + ## HITS:1 COG:BS_purN KEGG:ns NR:ns ## COG: BS_purN COG0299 # Protein_GI_number: 16077719 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Bacillus subtilis # 1 186 1 185 195 176 47.0 3e-44 MVNIAIFASGNGSNFENIIQEINNGHVNNAVCKVLIIDKEHAYAKERAEKLHIPCVYVNP KAYAGKEPYEQKILSILKEHQVELIVLAGYMRFIGKVLLESFPRRIINLHPAYLPNFPGA HSIQDAYEAKVDFTGVTVHFVDEGVDTGEIIHQEKITIDSTWSLETLEEHVHALEYDMFP KVIKHVCKMIESEEA >gi|312954207|gb|AENW01000056.1| GENE 130 137709 - 139241 1715 510 aa, chain + ## HITS:1 COG:BS_purH KEGG:ns NR:ns ## COG: BS_purH COG0138 # Protein_GI_number: 16077720 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Bacillus subtilis # 1 510 3 512 512 657 64.0 0 MKRALVSVSDKTNLVPFVSSLVELGYEIISTGGTKKALEAAGIKTIGISEVTDFPEIMDG RVKTLHPKVHGALLCVRDNPDHVRQIEELGIQYIDLVCVNLYPFKETVQKPGVSHEEIIE NIDIGGPSMLRSASKNYKFIPVLCDPSDYDAVVKELRENGETSLTTREYLAAKVFRHTAS YDTMIASYLTERTGEKYPEKFTITFDKVQELRYGENPHQSAAFYKGMNPQYSLANAKQLH GKELSYNNIQDGNAAIEILKDFEGQPAVVGLKHMNPCGVGIGKTIEEAWDKAYEADPVSI FGGIVAFNEPIHASVAEKLSKIFLEIIIAPAFDEDAFEILSKKKNIRLMQLDTSLEVNAK YKVTNVNDGLLVQDIDDHKITAEDLRCVTNRKPTEEELEQLLFAWKVVKHVKSNAIVLVK DNMTIGVGAGQMNRVGAAKIAIEQAGEKAKGSIMSSDAFFPMPDTVEEAVKAGVTAIIQP GGSIKDQLSIDVCNEHGIAMVYTGVRHFKH >gi|312954207|gb|AENW01000056.1| GENE 131 139797 - 140489 214 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 218 1 234 245 87 26 6e-16 MLKLENVKKLYSNNRGLRNTTIDFQEGEITGILGRNGSGKTTLLKGILNLLPLDDGIITW NDKSVEEQFDKVAFITEDGSYFPYMSSKEYGDFLSLYYPAFSKERYFELLDQFEVSKTDT IRTLSKGQQLKVEISAGFAMNAKLIILDEPFTTLDIYAKEDTVRQLIEQVKEDVIILIST HNIEEIEAVIDRCVVLDDGMIKEDITMDELNESGKDLRALLDPYRPAVKK >gi|312954207|gb|AENW01000056.1| GENE 132 140483 - 141235 419 250 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914973|ref|ZP_02077187.1| ## NR: gi|160914973|ref|ZP_02077187.1| hypothetical protein EUBDOL_00981 [Eubacterium dolichum DSM 3991] # 1 244 1 270 274 94 30.0 7e-18 MLKREFIQHIRRLWRILLITILAYFMVSAFIMQSIASNIRLLYSSDSWIELLPLVYNLFY GVTVCFFVLIFFYYILRTLFDYRQGKTRWMLLAYTQKPRIVADALLLAILLLVFYLISLT ILYFGFQYHLQLLENQHLFLPEKYQSFTTMLSMQLAFPFLYPTSVTSILFLISFYVSVVT GGTSVIYACRSEISCMSGWLYPSYLLLMYLSYTSWKSYLLMLFISLLYSAIFIIQLKKCC DYKQPGGYKC >gi|312954207|gb|AENW01000056.1| GENE 133 141242 - 142468 908 408 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914974|ref|ZP_02077188.1| ## NR: gi|160914974|ref|ZP_02077188.1| hypothetical protein EUBDOL_00982 [Eubacterium dolichum DSM 3991] # 1 385 8 388 416 178 30.0 7e-43 MKKTTNFMIFIALVSILCLSLPLIIARQAAFPLQDVIGNASALHGVSFDGTVNLEEASIL ISYDERARESHKITKPQIYPGSSYTSFTYVCEDDCKAISGWEKEKDQNRTDVTSYKRKLN KASLYVSVMLADTQQLGNDLGFIKTELSYIADQKHILLEDGMYDAEEKKLTPGWIEPENM AESGGTTQPVYHNGYYYILPPSTTAMSGQNYIYRAKKMKYPESYSINTDTEHGYYAMSTS LKTEKLTNVSMDRNYLALQISSDHMFVFSEKNQKLYITKYDLNGNLKDEISIKDFHYFDT IYKNDNYLCFSYDDTIQTLNTDTMQLISVKNKQLLSDSANQEYVSIYDILYKNGRIYVSM NADAEYFMNKVLVIENGKTLYVGSLDFLKLKPSLTELPADCFPVKFRR >gi|312954207|gb|AENW01000056.1| GENE 134 142465 - 143181 501 238 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160914975|ref|ZP_02077189.1| ## NR: gi|160914975|ref|ZP_02077189.1| hypothetical protein EUBDOL_00983 [Eubacterium dolichum DSM 3991] # 1 235 1 240 243 168 49.0 3e-40 MKEIRLFIENTSAPYVNKIIFLYVDIFLVQVALCFIGITEDINAIMLLAFYPSFLLLFLI HRKRYKTFMSEGGLTRVRLLPIRKSTFLYSELLFQFMTYLGLLCTHFLTWTALYFLMADK QPFLSNTFLFFQLSQATATTYMPFTAAVILLDLLKLITLTCISTLLLIGMETYKGLQTVL LYVGLLIIFLFIKLILAQMMPDFQVIEDWYAVAAMLLLLPIHAIQLKAFFMWKRRVMK >gi|312954207|gb|AENW01000056.1| GENE 135 143233 - 143604 518 123 aa, chain - ## HITS:1 COG:BH2647 KEGG:ns NR:ns ## COG: BH2647 COG1725 # Protein_GI_number: 15615210 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 6 100 3 97 123 81 45.0 4e-16 MNLQDIQFNKKEPMYPQLSRYIKKLILADELKHYEELPSRRELALQLSINPNTVQKAYKQ LEDEGIIKTISNVRSVVIVNEKILEKLRSEMIVETMKEFVKECQTSGLDFQQTIVWLTKL WNT >gi|312954207|gb|AENW01000056.1| GENE 136 143702 - 144028 378 108 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQKEEFENYKHMIVSEQPIFHAYIDMRSNVQYHINVYVSPWYKAYNYIFWIQNTTKDKSR AFRTEHVTLATFLANYVSNDKNTHEHLIREYLSEWIKTGVLNAEETIF >gi|312954207|gb|AENW01000056.1| GENE 137 144603 - 145166 522 187 aa, chain + ## HITS:1 COG:SP0723 KEGG:ns NR:ns ## COG: SP0723 COG4732 # Protein_GI_number: 15900620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 2 149 3 150 174 133 49.0 2e-31 MKNENRVFRHVFLAMMVAVGVVISPILRVEGMCPMAHFINITVAVLMGPWYSFLCAVLIG VIRMAVMGIPPLALTGAVFGAALSGIFYKISKGNIWAAVLGEIIGTGIIGAIVSFPVMAL LWGRNGLTWMFYVPSFFMGTVIGGSIAFVFLTSMQHSGMLLKMQRKLGGEQNVRETLESE KTAAAQS >gi|312954207|gb|AENW01000056.1| GENE 138 145117 - 145926 857 269 aa, chain + ## HITS:1 COG:PH1157 KEGG:ns NR:ns ## COG: PH1157 COG2145 # Protein_GI_number: 14590984 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pyrococcus horikoshii # 10 256 9 250 265 170 38.0 3e-42 MYEKLWSLRKQLQHSHNLIHCITNPISMNDCANAVLALGAKPIMAQHPMECEQITACSKA LALNLGNFDDSRAIAMKKSLHCANENGIPVIVDMVGAGCSDLREAFAEKLLHEGKFSIIK GNLSELKAVSGRDSHALGIDVGDDDREAPAKSAEWLAELARKYGTTVLCSGEVDILTDGK QIYFVENGDSMMTLCTGTGCMLNVIAAAFLSVTETALDAALAACITFELAAEKSVSITEG PGSFHASLFDSLYEINTLDFAKARIRREL >gi|312954207|gb|AENW01000056.1| GENE 139 145923 - 146552 790 209 aa, chain + ## HITS:1 COG:SP0725 KEGG:ns NR:ns ## COG: SP0725 COG0352 # Protein_GI_number: 15900622 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 2 207 3 208 210 199 52.0 2e-51 MRFDLTLYLVSDSTGLSEDEFLRRLEQALRGGVTLLQLREKNRTTLEYYELARKVKKLTD AYGVPLMIDDRVDIALAVDAAGVHVGAEDMPVREARRLMGPDKIVGATAKRVDTAMQAEA DGADYLGVGAIYPTTTKVKTVLTSVETLQDICAHVSILVGAIGGLNAENCEILKGTGIKG ICVVSAIMKQENSYDAAKALKAKIMTICK >gi|312954207|gb|AENW01000056.1| GENE 140 147189 - 147464 282 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLKKWHVCLAIVCILCFGYIMYIMNPEFDDLKRFINPIYEGDKSYRVVNEENKDVTEAF IQDTRLYHTFKFYGKIKDYISDNNLTLSKDS >gi|312954207|gb|AENW01000056.1| GENE 141 147682 - 148362 258 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 220 1 217 245 103 34 5e-21 MALIHCEDLTKRFHQGKQAITAVNHVSMDICPHKITAICGPSGCGKSTLLHMLGLLMKPD EGKIIINGQEVKEGKDLPAIRNESFGYIFQEYALMEQDTVMENIALPFVYSKKKIPETKQ QTILSSLSEALGIQQLLKKKAHDFSGGERQRTAIARALVNNPSILLADEPTGALDAENSE RVFQILLDLRKQEKAIVFVTHNMELAKRCDTVYTMKDGCIAGIHTN >gi|312954207|gb|AENW01000056.1| GENE 142 148377 - 149432 402 351 aa, chain - ## HITS:1 COG:no KEGG:Teth39_0940 NR:ns ## KEGG: Teth39_0940 # Name: not_defined # Def: hypothetical protein # Organism: T.pseudethanolicus # Pathway: not_defined # 1 305 1 325 375 67 23.0 1e-09 MNKQIHFALKDIKYHKLRSFTTALFVIMIATCCGIFSTQISISYREYQFFNHIQKAAPVQ FSSFQVDDSESNRDTLQYLSTALRYNGNAYSYISDYFDEDGNEYFIVFGSFPAFFQLTGK DINAIGILVGNDKQSDQTGYPFHGKEIPVIDKLKKGSSYLDNGMGRISLDNELVLICDFN SFHTMDSSYDMEILDHLTITKNQNAEINQLLTSLPESRTMVPQNNLVKSRLYQSTYQENL YFLLYYAAMFILCIIFLFYILKLLIRNNRKEYTIHLIYGACRKDIWLRLYWYITFLFGLP FLLLFTFSAQGLSFALILITAVILLLVQGGICYFSIRSIELEHLLIEIRDN >gi|312954207|gb|AENW01000056.1| GENE 143 149425 - 150405 514 326 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGATRFVYICISFLLMFTVIMFLSLITCRNGELDDIYQIRSGYKLLQIRETDTTHPLSGK QLYASIRETLNEDTDILILDNVDDIGLGLYDPSHKLINAYGLPETTFQANSLSTDERYSY ILKTSYLFEHPQLYKIETGTVLGAVKEIPGDHYLIYNLFSYSKLQGNLIVKGSDELLNII RQNLDIHHYEYTEETFSNWSKLSGIINNPFFSYMLFSYVFVFIGLSYFIYHSIACKKREY FIKQALGASRKALLLENLREIFFLGFIGCIPALLFHHWIIQQLQLTFIRESIWINLFAML ISLLFLTAACILILFRNLNKEGYLYE >gi|312954207|gb|AENW01000056.1| GENE 144 150632 - 151153 301 173 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|218283731|ref|ZP_03489675.1| ## NR: gi|218283731|ref|ZP_03489675.1| hypothetical protein EUBIFOR_02269 [Eubacterium biforme DSM 3989] # 1 170 4 175 176 99 36.0 5e-20 MKKIICYLLLSALLINVALNSNAFKIYGAEPCSDCTVAPSKVINEWVDESGNEVKMFEEN VEVTYLENDAIIIRDYGHNYDNTFDIKSTGKTRIAWITIAKVIWNAVGVCSAVYYVTGTD ACRIALRYLGTKKKNLVKYELTGRFIPGKIPGCEPSYSGPCNSGYWEYRVTRA >gi|312954207|gb|AENW01000056.1| GENE 145 151347 - 152051 412 234 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 46 227 49 227 234 65 26.0 9e-11 MGKRKLLLCDDELSYAEDIKKMIDDLYPVLYEIQTATDQSFDIDAQFDIYFLDIDMPSIS GFDLAEKIHNRYPEALIVFLTTHEELSMEGYQYQAFRFISKLRLDSMLPRVLKALKEYFE QYDQMIYAKDENDATVPLLIKDITCLLAKGNYTDFNTEKNVFSKRIKVKEFLNSYKTEVF MPIERGLWVNMRHVKKYDPKTGVLFIQEGVHLTVTRKYKAEFLKQYIKRGTFCT >gi|312954207|gb|AENW01000056.1| GENE 146 152140 - 152715 280 191 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKKLLMVLLCIPMLSNINVFASENVQDELLEEDLDLTEEIEMFDSFYQQPDRYIFQDIN GDDLNGFVMQYKDEFYKNRYQTTDFLMENVRSVQDLGSVISYYSGRSKTWANQKVYYTKT RYNVYSATGSCTVTNNKITSGKCSAKIVSKNNTYSILRTSYSIGEQGKKITFTITHSINN KIITTKHTITI >gi|312954207|gb|AENW01000056.1| GENE 147 152749 - 154074 694 441 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 259 439 249 432 433 66 30.0 1e-10 MEYIDALLIMHMLRSICSYFFLYKIMELKTYYKSKRETCLFLIFLLIVFIGNLAIFAFIS WEDEFGIVRYYPDIIEDILMMLIIITVFHTNIWKCIYYIVFGYVFVLSVQLLGGIIDFIL LDSIFHIILTPDQEAILYLLEIGLLFIIYLIIKHRNNRQYMIDDKDWPLFAVLAIVVCAY FYYIQNVVPYIDPENSIMYVSMDYIQLGFMVGIFFLFGRYHIILGKKSQELLNTQLKLQS EEFQLKLRDELTHANTENKKLRHDLKHHFTVLQSKIKEDPEYALEYVKQLSDHVEIVTYA NTNNEILNYILNTKAAIAHQMDIPFEYKISDALLFINDFDLISILGNALDNAIEALQFVK EAWIHMVIASYEDTVIIKIENPCDSVRIKWNDDVLSTSKKDKDKHGYGLKNIKELCEKYQ GSMEINIENAIFQLILSFLKI >gi|312954207|gb|AENW01000056.1| GENE 148 154165 - 154833 61 222 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLCTWGGTMQNQEVMKEESVGFLLIQYKYVLEYLQLLAEDNWRLKKVKDTSFYFERGYR VQHSYCLIPVDMFDRELELRAKQLDWKRIGAWKHLLVFGNETLNAIPLIEERILNEYIKA SRYKWEDFVRIVCYIIGSISCFLSSFWCVFHSTDFISFFFLSLLWCGVSVFQFWVLIRAS RCIWRFDFETVKDIEKAKKTILGINENMIISIIASILILIVG >gi|312954207|gb|AENW01000056.1| GENE 149 154992 - 156635 1721 547 aa, chain + ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 5 544 2 537 538 250 29.0 5e-66 MLNKEKIYITGHRHPDTDSIASAIAYAKLKQRQGFHAIACRLGPVNAETEYLLERFHMDL PMLFEDARATLDEIEIDGPLAISPQTTIMETLELMSEQNKQSYGVINAQGKLMGMVTKSD LATVGLGDTAVAIQLLQETPPEYIAKTVSGKMIYMDKAYHFNGKTSVIAIAETKLNNYEL QDRLVIVGNDSEAQEAAIRKGAGILVAVWTEHIEESVIALAKEYHCPIILSGHGTMNTSR YLFFSPPVKLLMKTDLVSFNKNEFVDEVGKKMLKSRYRSYPVIDDENHLIGYVSRYHILN QHNKKVILVDHNEYAQSVKSIEKADLLEVVDHHRVCDISTNRPISFRNEIIGSTASIITS IYLENQMSIPKDIAGLLLGAILSDTLKFKSPTTTAKDKGLARMLAEIAELDIDVFAKEMF KVSSNISNKTPRELLNQDIKKFEIDGRTVMISQVIAYQVSEAKEIEDTLQSEMVKFAQEK GLDLLVVAFTSILENGSVFYAAGDIADVVAEAFPNHFEEEHSFQEDILSRKNQIVPLLSR AIINSVH >gi|312954207|gb|AENW01000056.1| GENE 150 156941 - 157090 82 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEEIKTIFKNPMKLNIACKSKFRKEDIYKCAITELGWYRRSTMKVVNFT >gi|312954207|gb|AENW01000056.1| GENE 151 157261 - 158916 2061 551 aa, chain - ## HITS:1 COG:CC1085 KEGG:ns NR:ns ## COG: CC1085 COG4805 # Protein_GI_number: 16125337 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 55 549 46 559 564 127 23.0 8e-29 MKQEFVESMEQSYPNTHIILENPKDYGVDTSKTKVQIDKELNETTMKENKELNEKSAKAF KEFDRDTLSDEQKETYDIYSYMLDYTTEMNDSKFDYMSMPLESMTGMHTQLPTLFSDWTL RNEQDVKDVITLMKSVRPYMDSILAYTKKQEEKGTLMLDIKSVKEYCEKVVKEDVNSSVL TGLNESIDNLKLGDDKTKQYKAELKKAFQEYFLPAYSDIIKTMKELDSSKNNTLGLSHMK NGKEYYELLFKQATGTDKSIEDIKKELNSMSRSSLLAVQSVISKNKNLYDEYVNGKIKTK YKDFESMLKDLDKDIKDDFPSVGTLNYRIRPIGEDLASGGVAAYFNIPALDGTTPKQIRV NMLEDALNVQSLETFSTVAHEGIPGHMYQIAYAYKNVKDPWRNSMASFLGYTEGYATYTE LYALKYLDGVSADAVKLQQNMVVYQDCLIALADIGIHYEGWTKEDLSNFLEENGLGVSDV SDFYNQLQANPTAFLSYYVGYVQIANLKKDAQEELKDKFNDRDFHEAILKSGAAPFHVVE ENVKDYIESAK >gi|312954207|gb|AENW01000056.1| GENE 152 159219 - 159971 726 250 aa, chain + ## HITS:1 COG:SPy2054 KEGG:ns NR:ns ## COG: SPy2054 COG1349 # Protein_GI_number: 15675824 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Streptococcus pyogenes M1 GAS # 4 243 3 242 248 238 51.0 8e-63 MHERHTKILELLSQYKKIEVTRLSELLSVSQVTIRKDLMQLESSGLILREHGYAALHDSD DLANRLVYHYEIKQRIASLAVADVQDGETLMIESGSCCALVALEIAKTKKNVTVITNSAF IADYIRKQGTLQIILLGGEYQQSSQVMVGPMTRRCMEPFYVDKLFIGTDGFTADSGFTGN DYMRSETVRDMAQQANHVIVVTESTKFSQKGLVHLIDTGHIHMVVSDDRIPEECEQYLTE QGVEVKKVKV >gi|312954207|gb|AENW01000056.1| GENE 153 159990 - 160886 741 298 aa, chain - ## HITS:1 COG:SPy2055 KEGG:ns NR:ns ## COG: SPy2055 COG1180 # Protein_GI_number: 15675825 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 3 298 4 257 257 254 45.0 1e-67 MCKGMVFNIQKFSIHDGPGIRTTVFLKGCPLRCRWCSNPESQLSKTQILYDASVCIQDGA CLQACPQQAVQRKGSRIVIDDAQCLGCLRCIATCKAKALQVEGVCRDADEVVATCLQDRD FYEESQGGVTLSGGEALAQPSFAKALVLRLKQEGIHVAVETTGYIQPAVFQKLAPLFDLL LFDIKHYDTEQHVLGTGVNNDLILENLAWSVKHQLCVLPRIPIIPGYNASLQDAKGLAAL LTSLSIQRVQLLPFHQFGEKKYEMLNRDYGMKHKKALYPEDLRDYQQIFLNQGIDCFF >gi|312954207|gb|AENW01000056.1| GENE 154 161078 - 163489 2143 803 aa, chain + ## HITS:1 COG:SP0251 KEGG:ns NR:ns ## COG: SP0251 COG1882 # Protein_GI_number: 15900186 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 5 803 14 812 812 1121 65.0 0 MENREHFGTLTERMHSFREELLNTEASIDATRAVLATQAYQEHADKPLLVKRAFMLKNIL ENMPIFIEPQTLLAGNQAKKNRAAPIFPEYAMDWVIKELDEFELRDGDVFQIDEETKEEL KSIAPYWYHNTTLDKGLAMIPPESRIFYDLGIIKAEGNITSGDAHIAVDYGKIMRKGLRY YEQRTLQEKRKLDMTEPDSISKYHFYEAILIVIAAVQAFAKRYAELALAQAEAAQGKRKQ ELQKMAQILDRVPYKPAENFHEAIQSMWLVHLVLQIESNGHSLSYGRMDQYLYPYVKHDL DTRVLQEEQAVELLTNLWLKTFTINKVRSWSHTQFSAGSPLYQNVTVGGQTHDGKDAVNM LSFLILKSVAQTRLPQPNLTVRYHRNLSAAFMDEAIEVVKLGTGMPAFNSDEVIIPSFME KGVGKEDAYNYSAIGCVETAVPGKWGYRCTGMSFLNFPKTLLIAMNAGVDPASQVKLVEG LTHFSEMTSYAQLQEAWDITIREFTRHSVIIENCCDLVLEQDVPDVLCSALTEDCIKRGK TIKEGGAVYDFISGLQVGIANLADSLAAVKKLVFEEQKITADQLWDALMDDFTSPEHKAI QQMLISDAPKYGNDDDYVDQLIVDAYDVYINEVKKYPNTRYGRGPIGGTRYAGTSSISAN VGQGKGTLATPDGRNAATPLAEGCSPSHGMDKNGPTAVFKTVSKLPTHEITGGVLLNQKM TPQMLSSEENKQKLEMMIRTFFNRLDGYHVQYNVVSRDTLLDAQKHPQKHRDLIVRVAGY SAFFNVLSRQTQDDIIERTEQTL >gi|312954207|gb|AENW01000056.1| GENE 155 163569 - 164942 1397 457 aa, chain - ## HITS:1 COG:CAC3595 KEGG:ns NR:ns ## COG: CAC3595 COG2509 # Protein_GI_number: 15896829 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 1 452 1 452 457 614 65.0 1e-176 MDFDLLIVGAGPGGIFSAYEAMKLNPELKIALFETGNPLEKRKCPIDGVKIKSCINCKTC AIMNGFGGAGAFSDGKYNITNQFGGTLYEHIGRKEAIDLMNYVDEINVANGGQGTKLYTN ENTHLKKKCMQNDLHLLEASVRHLGTDVNYIVLENLYNQLKDKIEIHFHTHIDAVEKLEN GYRLVSRDKSFTGSKCIISTGRSGSKWMGSICKSLGIATKSNRVDIGVRVELPYSIFSDL TDELYESKIVYRTTKFQDKVRTFCMNPRGVVVSENTNGIVTVNGHSYEDPSRYTENTNFA LLVSNHFTEPFKDSNEYGESIARLSNMLGGGVIVQRFGDLIRGQRSTDSRIAESFVTPTL SATPGDLSLVIPKRQMDDIIEMIYALDKVAPGTANDDTLLYGVEVKFYNLEVEIDHNLET RHEGLYVIGDCSGVTHSLSHASASGVYVARHLYSNKH >gi|312954207|gb|AENW01000056.1| GENE 156 165238 - 166200 880 320 aa, chain - ## HITS:1 COG:no KEGG:WPa_0291 NR:ns ## KEGG: WPa_0291 # Name: not_defined # Def: hypothetical protein # Organism: W.pipientis # Pathway: not_defined # 55 294 54 306 310 70 27.0 9e-11 MENTKANTVLNYCNDVFFKYTLSREDEGSVYARNTIIERVTGIKVKESTVQNPNLDPGTI GKKRIILDVHVKDEKGRFFNLEMQTTYAGVAEMMRFEFYGARALNNQLDSSEKYKDLKPV YQIIFIEKCAWNNKNLINHYQMRNEQGEDESKHPLIRRTYIHLPVINEIAKKKAIQQMDD FEQLCFLFENNAKNDILESKERLVKVFVNKYEEMQKDDELWSTAMAIQMGEARYRYGLED SFEEGMKEGIIKGKAEGKVEGRIEGERQLLHRLMEAKYQEDCTAWLQSLTEDQLHIVSSL ILKCDTLEAVKKQVHTADTM >gi|312954207|gb|AENW01000056.1| GENE 157 166471 - 166851 402 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400119|ref|ZP_06644265.1| ## NR: gi|293400119|ref|ZP_06644265.1| multidrug resistance protein B [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 126 1 126 126 142 50.0 7e-33 MKRYAIIGCLWFLMASAMIHGNARAEIDYEIRYDSNTKQTYELKQKIQDIYSELVRGVHK ESYILMVLHNKELFAYRKDLQADWKQNQLVITEGDGKGDTITGTLRTESVCVPEVQPRSL FQEIFQ >gi|312954207|gb|AENW01000056.1| GENE 158 166988 - 167416 434 142 aa, chain + ## HITS:1 COG:no KEGG:Elen_0703 NR:ns ## KEGG: Elen_0703 # Name: not_defined # Def: response regulator receiver protein # Organism: E.lenta # Pathway: not_defined # 31 139 34 143 145 79 35.0 3e-14 MKIIEGKDSQQLDVRIRFDSLEEKQAAFRLLAAMHQKLIGLQRDKEYLLRLEDVCFIASS DKRTFLYTAQGCYESMLWLYQMEEQLNDDFIRINKATIINMEHVTSMHADLGSRIRVYLD TGHQHMVTRTYVKAFKQKLKGE >gi|312954207|gb|AENW01000056.1| GENE 159 167421 - 167894 473 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296443279|ref|ZP_06885328.1| ## NR: gi|296443279|ref|ZP_06885328.1| hypothetical protein CloleDRAFT_3415 [Clostridium lentocellum DSM 5427] # 5 153 7 155 161 69 25.0 6e-11 MYNYLVKFFRNVTMSFFTAIFVIALAGVTCRDGIMKVSSFYVQGGISFSAVFELLLLSSL LALCNLLLDKPTVFPAMRLTYKIILRIAVVVMLILPFIYVCRWFPVDDHAAWIGFVVCFL LSFSAATLLSVYATRRKDREYQKLLEAYKAKKEERKK >gi|312954207|gb|AENW01000056.1| GENE 160 167891 - 168733 330 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 251 12 253 318 131 33 2e-29 MTILEADHIQKRFAEKMVLKDISFSIEKPEIFGLLGPSGSGKTTLIRILLGLLKKDGGSS YVLGNDSGHLSDDTYAQIGMMLDEAGLYDRLSCIDNLDIYRRLYQLPYNVIEPALRRVSL YDSRQKAVIKLSKGMKQRLSFARALLHEPRVLFLDEPTSGLDPATTSNIHELLFELKEKG VTIFLTTHDMEEATRLCDRVAFLNEGSIIECDTPEAICCKYNTTNQVNITTAQGESIVLD IKRDAVKIMHLMEAGHVKTIHSMEPTLETVFITLTGKELV >gi|312954207|gb|AENW01000056.1| GENE 161 168735 - 169439 669 234 aa, chain + ## HITS:1 COG:no KEGG:Cphy_3597 NR:ns ## KEGG: Cphy_3597 # Name: not_defined # Def: ABC-2 type transporter # Organism: C.phytofermentans # Pathway: not_defined # 1 231 1 229 231 102 29.0 1e-20 MKPSHIYAIIRKQLKDTFRNKPTLVQFVMFPAIAAILTLSAGEFELPKRYFVNLFSVMYV CMAPILILSAIISEEKEKGSLRMLMMSNVKPMEYLLGIGAYVFVFCMAGVLFMGLLGKFS LQELWMFLLLNACGILISSVIGALIGVVSDNQTAASGLSVPAMLLTSFIPMLSMFNASIR NVGKFLYSQQIYEQINNSSTIVLSAQSFVVILINFALVLVLYVYMYRKKQLLAS >gi|312954207|gb|AENW01000056.1| GENE 162 169525 - 171363 1466 612 aa, chain - ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 6 478 5 493 505 171 25.0 3e-42 MKQKNKELLRALFDLQPANTNLLANHLNVSVRSIKNYVREINEEYPEAIHSSREGYRLDM ELAKSILDETADHIPQTSEERVIYILNQLINHHQEEAIDIYDLCDELFISLSTIKNELQK VKRKLLSTLLYNESNVNFVNLKSLQNSFLDIDIPYIKNTVLQIFEDYHYFINDYSLINLV LHITIAIDRIRKNNINTTSIDQQPAVHLHEYELAEKVAGRLEEHFHITYSKAEIYEMTLL IISRATTIDYKSINAANLEDFIGKECLNLVKELILDINSFYYIDLSEQEFLIRFALHIKN LLVRSKNNYFSKNPLADGIKTSCPLIYDVSVSLAATIKEKTGISINDDEIAYIAFHLGSA LEAQKSLTEKITVALYCPSYYDMSLKVTDVIKRYYSDELLITNILTDESDFDKIKDTNLI ITTIPVSVITSIPMIQISIFLNQKDRQLLNEKIETIRKLKKRSVFEGYLKELLLPDFFEV LKSGFSTEKECITYMVNKLIVHGYVDVEFENEIISRENMSSTAFGSFAIPHAMKMHAKKT GMNIVISETPISWNQQDVYLVLMLCFNKSDRYIFNEIFDPITMILSTPENVKKLCGCQSY EDFISTMSDLLQ >gi|312954207|gb|AENW01000056.1| GENE 163 171566 - 171880 391 104 aa, chain + ## HITS:1 COG:lin0914 KEGG:ns NR:ns ## COG: lin0914 COG1440 # Protein_GI_number: 16799986 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 5 99 3 97 101 79 51.0 1e-15 MEKLNVLLVCGSGASSGFMAANMRKAASKQGLDIDIKARSESEIENYIDEINVLMVGPHL AYILDEVEEYTHGEDVKVILMEPDYYSVLNGEMAIAHLLEEMEK >gi|312954207|gb|AENW01000056.1| GENE 164 171906 - 173165 952 419 aa, chain + ## HITS:1 COG:SA1992 KEGG:ns NR:ns ## COG: SA1992 COG1455 # Protein_GI_number: 15927770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Staphylococcus aureus N315 # 1 411 2 422 570 117 24.0 3e-26 MNNLINWLENSFAPKMNKFNHNTWVVTIKDSIMQVLPFILLGSLFCVGTVIEGFVTLPFS FWTPYGWTMGMISVLVSFLIPFNFCEKKRLRKQRIIAGATGLILFFISITPELVKAGEPG FGSSAFGAGGMFCAMFTGIVTSIVFNLFGKFSFFKEDSAIPDFVRQWFDALLPIGGIIFT GFIVVQVLNIDLYAIITSFFMPLQGIMNTWYGFILVCFLECFIYSMGISSWVLAPATSPV KLQSIAANIALATAGTASVANLNMYTESCVYTCYLWIGGIACTMPLVIFLALSKSKKLKS LGRACIGPTIFNINEPVVFGCIAWNPVMMLPMWINGIVLPALVWIACKVIAIAPIPKIQF EMWYCPFPISTWITSEGSIMAIAVMLIIFVVGGAIWYPFFKAYEKQCIDEETATEAAAE >gi|312954207|gb|AENW01000056.1| GENE 165 173185 - 173532 448 115 aa, chain + ## HITS:1 COG:lin1830 KEGG:ns NR:ns ## COG: lin1830 COG1447 # Protein_GI_number: 16800897 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 8 102 5 99 100 64 37.0 4e-11 MMSEQTVQSAMSIILHAGDARVACKEALDAISEADFETAEVKLKEAQTKITEAHKVQTDA IQGETRGDESEYSLLFAHAQDTLMTIYSEINIAKQLLKIFSAYEKRISALENKDC >gi|312954207|gb|AENW01000056.1| GENE 166 173543 - 174988 1409 481 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 8 481 7 482 483 498 51.0 1e-140 MARIPNGFPKDFLWGGAVAANQLEGAYTAGGKGLCVADINEFRDDIDITKKYNDEVTSAY VKDAMNAGNNDGRVFPKRRGIDFYHTYKEDLRLLAELGLKTFRTSINWARIFPNGDDEAP NEEGLKFYDALFDEILKHNMVPMITVSHYEMPLHLTLKYKGWYSRETISFFENYCKVIFD RYHDKVKHWILVNQINLISHESFNHLGVAEDMVDDLKSAKYQAVHNEMVACARATRYAHA TYPDLQIGMMLCGGHDYAATSKPEDQLAALQHNQMEYFYSDVLLRGVYPGYALRFFEDHD IHVEFGEQDEEDLKNTCDFFSFSYYYTRIVTKESFENGNDSIRNKELPANEWGWTYDPIG LRILLNTFWDRYQKPIYITENGSGFYDKLENGHIHDPYRVDFYRNHFEQIKEAIRDGVDV RGYYAWGPIDIISCSSSEMSKRYGFIYVDYDDYGKGSGERIKKDSFAWYKKVIETNGEEL D >gi|312954207|gb|AENW01000056.1| GENE 167 175183 - 176058 1101 291 aa, chain + ## HITS:1 COG:TM0177 KEGG:ns NR:ns ## COG: TM0177 COG1284 # Protein_GI_number: 15642951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 6 291 6 283 283 144 33.0 2e-34 MKLSNKELVQDTLWILAGNIALAMGVAWFILPNDVLTGGLAGVAIALEPLIHLNPELVIN VLTVVLFLAGSLVLGKKFAAKTILSTICYPLLLTLLSYLAKHVIAPDTFIMDKYLATIYG GALMGIGVGCVFRTGASTGGMDIPPLIINKYTHIPLPTLVLIVDALTVLLGAAVYGLQAA LTGILSVWVSSYMINKTMMIGGHDARNVMIVSNKHTEIMDRIHEVLERGTTILEATGGYS SEKRPVIMAVVSKKQLPELEHLVSHIDPEAFVIVMEANEVQGLGFTYEEEL >gi|312954207|gb|AENW01000056.1| GENE 168 176094 - 176909 920 271 aa, chain + ## HITS:1 COG:DR0470 KEGG:ns NR:ns ## COG: DR0470 COG1387 # Protein_GI_number: 15805497 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Deinococcus radiodurans # 13 234 8 229 260 80 30.0 4e-15 MEGGGNMQNFNYHSHTERCGHAVGSDEAYVKEAIKNGYRYMGFSDHAPYRNGDAPGERMR VEELADYVSSVRKLQHTYQNQIEIRLGMEIEYFEEQLDELMQYKEEMDYLILGQHGPALY APEFYDNHSDADVLHYASLIEKACEKGLPDIIAHPDLFMFGKEVWTEACCEAAHRICASA QKHGVILEVNLNGLRYGKRKLGEEFRYTYPYRSFWEIACTYDVDVVYGLDAHAPQKYADQ DCFAIVNQEILYDLPLKFRNELRFEDRNRGN >gi|312954207|gb|AENW01000056.1| GENE 169 176911 - 177660 751 249 aa, chain + ## HITS:1 COG:CAC0748 KEGG:ns NR:ns ## COG: CAC0748 COG0778 # Protein_GI_number: 15894035 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 9 239 10 239 241 199 42.0 5e-51 MLKEAMYKRHSRRSYLREKLRDEDAAFLKERIHMYNQKHGLHMKLVCGHPEIFKGFRNSY GMFHNVENFIMMMGNSRDVYMQEKLGYFGERLILEAVERNMGTCWVGGTFAKDALKPYVK EDEKLYCVIAIGYTAHKKTLKEQLISHATRHRGKTVEEMSDITAHSPDWMKNGMEAVQLA PSALFKQPVRFRQEKDRAYAEVAHTDSFEMVDLGIAMLHFEIGAQKGTWTWGNPAVYEKI NENSEAYLP >gi|312954207|gb|AENW01000056.1| GENE 170 178236 - 179594 1157 452 aa, chain + ## HITS:1 COG:CAC0165 KEGG:ns NR:ns ## COG: CAC0165 COG0577 # Protein_GI_number: 15893459 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 78 445 60 447 451 101 23.0 3e-21 MELLRFSYTNLRRKPADAFFFAFSMFSASLVITMFFAIIANPYYGSESLRDASAMSQGGM SLVASFDGGIGSGIFTMMLSLFMIFICILTVFFSNKFFLMSKTHDIGVMMISGSSIIRIA KFLIVQNFMIMGIAAPLGALAGCCVFPLVNHVIYLSMNIQAPVFTFSSAALGYCIATLVI VSVWLVIVDAGFVYRMDSMNELLRARRSMNPIGKQKQVFMKIVYVCVYALTIYLLFSIDY HYMNAIFLIYLGVAIVFGAGNVFRYILPDVLTLMKKRMFAENRHFLISLGNLRYSMVNGN LLVTIILLSTAVLFLYLCKFYNDTATFMVVMIAFLVSMLQISICLVYKLSADGLSKCQVF RNMTAIGYLKTDIRKIIKQEIVGFYGIILLLSLPPLLVITSLFAAGGDVAWSFVLQLHGL YIGFLLVAAVVMYRIYMKLIFRQDLMEAYMEE >gi|312954207|gb|AENW01000056.1| GENE 171 179606 - 180061 276 151 aa, chain + ## HITS:1 COG:CAC0164 KEGG:ns NR:ns ## COG: CAC0164 COG1136 # Protein_GI_number: 15893458 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 1 135 7 139 260 144 51.0 9e-35 MNTILEAKNITKIYNRHTKNEFEALRGISLEVHEGDFICIMGPSGSGKSTLINNLSTIDT PTKGKVKINGIDVYSMLESQTGKFRYENLGFIFQSFNLMDTLTLKENIALPLTLSNMSKE EIGIRVQQTAERLELCFYTQFICIWKHFIFS >gi|312954207|gb|AENW01000056.1| GENE 172 180058 - 180531 252 157 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295099889|emb|CBK88978.1| ## NR: gi|295099889|emb|CBK88978.1| Predicted hydrolases of the HAD superfamily [Eubacterium cylindroides T2-87] # 22 150 76 211 211 70 33.0 4e-11 MKYGRHLTDFRAAFFDIGNTCFNQVHGQIPPANIDAVHRLQEKGFHYDPYFEKLLDVAIT YSGHRNTDLIPAGVTKATGIHQLMKLWRLPGHDYLCFGDIRTDIPMLKDVCLGIAMEHAK KEVMLHADAVCGRSDCNGISSFLRASSLIKKESYAAF >gi|312954207|gb|AENW01000056.1| GENE 173 180770 - 182359 1737 529 aa, chain + ## HITS:1 COG:BS_ykpA KEGG:ns NR:ns ## COG: BS_ykpA COG0488 # Protein_GI_number: 16078507 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 522 1 526 540 665 61.0 0 MIETQNVSVRFGSRTLYDNVNLKFTDGNCYGLIGANGAGKSTFLRVLSGELKPDTGSVII KPNETVFTLKQDHFAFDEYTVLETVLMGNTKLYEVKREKDEIYCKEDFSEADGIRAGELE AAFADMDGWNAEINAATLLNGLGISVDLHDVLMKELSGSDKVKVLLAQALFGKPNTLLLD EPTNHLDIKACSWLEHFLMNYENTVIVVSHDRHFLNKVCTHIADVDYGKIKLFAGNYDFW YESSQLISRQLKDANSKKEEKIKELEDFIARFSANASKSRQATSRKKILDKITLDDLQPS TRKYPFIEFKPERESGRSILYIEDVEKQVEDCRLTNISFNMMKGDKVALIGNPLKTTLLL KLIAQELTPDAGSIQLGQTIKVSYIPDDNSAYFEGTQSICEWLSQYTDIDDMSFIRGFLG RMLFSGEEPLKPVNVLSGGEKARCMLSKTMLEAGNLLLMDDPINHLDLESIQTLNNALIK YPGELIFVSHDHQFIQTIANRIIEIRDDGIIDRRTTYDDYLEKEYGIEE >gi|312954207|gb|AENW01000056.1| GENE 174 182735 - 183553 905 272 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400212|ref|ZP_06644358.1| ## NR: gi|293400212|ref|ZP_06644358.1| hypothetical protein HMPREF0863_00495 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 272 1 262 262 265 56.0 2e-69 MNSKRIKFALFICVFALYGCASSASVPQKSLNTVNNKHTVSQDTLHTNSLIQTKDTSMAA MAFHAYGPMQKSGSMFRSMRDEHGVLLMKSDVEGYAKKMKEKVVKERKRQVQLEKKRKEQ ERLKRMEKESSQAFSPKITTYGVDCYGCGGESGRGGTSLGVALDLTLGVQMPDGSWQPGI RYGNYYIVAADPSIPLCSILKISDHGLSGSGITPDQPYYAIVLDRGGAIQGNHIDLYIGS ENSGAIVPVKNTQAKAQIIREGGKNGARSCAL >gi|312954207|gb|AENW01000056.1| GENE 175 183671 - 184216 730 181 aa, chain + ## HITS:1 COG:BS_yabF KEGG:ns NR:ns ## COG: BS_yabF COG1658 # Protein_GI_number: 16077109 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Bacillus subtilis # 3 171 1 171 186 145 48.0 5e-35 MLVKMKEILVVEGKNDTNVLKSFLDCDTIETNGTHLGKEILRQIRLAQKTRGVIIFTDPD FPGEKIRSCINAAVPGCKNAFIDKAKAKTSKKVGVEHACKEDILEALTHLMTFDEHLQVT LSYEEYLDLGLNGREDSAEKRAQIARSLHLGKPNAKTLFKRLNMLQLHKTDVEKLLGQPY E >gi|312954207|gb|AENW01000056.1| GENE 176 184209 - 184799 554 196 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293399848|ref|ZP_06643994.1| ## NR: gi|293399848|ref|ZP_06643994.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 14 195 15 196 197 127 40.0 3e-28 MNELVKVTFALRPKEQLEGWVSEILQEGWELSSFRYVMLGSLMNFRFVEGKRRHVRVCFY DVKYDADESIFLAEGWNVLCRNGLSVIFYHENLDQPLPLLDMKLYTKRRIFKMTCNLLYL FSLLYCVRVEEEALRKPLLFVFTLLLFALPLLFDVKSTTKYSNLIRIIKNLLYAVLLTGI VYLLIELLVSTFYLLF >gi|312954207|gb|AENW01000056.1| GENE 177 184813 - 185688 829 291 aa, chain + ## HITS:1 COG:BH0057 KEGG:ns NR:ns ## COG: BH0057 COG0030 # Protein_GI_number: 15612620 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Bacillus halodurans # 1 279 1 284 289 252 49.0 5e-67 MKKPIATPSRTKEILETHGMFAKKNYGQNFLIESGIVDKIARHAVLSDHCVVFEIGPGIG ALTQYLCEYAKKVVSFEIDERLPDVLADTLQEYDNFELVMSDFLEIDLKEWCRTYREEGY DVVIAANLPYYITTPILFKIFESKADVAAITVMMQKEVADRFAAEVNTKDYNALSIITQY RCEVTPVMKVPKNVFLPKPNVDSAVLQFRFRDTPQNIEEESFFPLVKACFRQRRKTILNN YGEYCQDKQQARAELEKSGIDCTRRAESVTLAEFINLYEVHRNESKSTCEN >gi|312954207|gb|AENW01000056.1| GENE 178 185660 - 186499 742 279 aa, chain + ## HITS:1 COG:BH0061 KEGG:ns NR:ns ## COG: BH0061 COG1947 # Protein_GI_number: 15612624 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus halodurans # 3 260 5 264 287 192 38.0 8e-49 MKVKAHAKINICLNVVCRRDDGYHELEMIMVPLMLHDELTITVSSEDCYTCNDAQLRMDE TNTIVQAVELMRRTFSLSECFHVHVEKHIPAQAGLAGGSADAAAVMRGIRDLLKLDISLE ELAQLGKQVGADVPFCIMETCALVKGIGERITPFAMPCDFHILLVKPAMGVPTGKAFSML DFEKCDHPNCNEVIHALQQGDLAQLSSVISNSLEYSAFQLVPEIADIKHQLQSMGFEAVL MSGSGSTVFAITRKKELLRQAEKRFHNKTYFVCCTAIKQ >gi|312954207|gb|AENW01000056.1| GENE 179 186668 - 187498 498 276 aa, chain - ## HITS:1 COG:no KEGG:Ldb0071 NR:ns ## KEGG: Ldb0071 # Name: not_defined # Def: glycosyl transferase # Organism: L.delbrueckii # Pathway: not_defined # 1 173 1 200 315 78 27.0 3e-13 MDKISVIIPCHNNAGALRRVYTDVLREVKKLPVSYELLFIDNASRDGSSAILRLLSQQDY ACHYVSLNHRVTPVSAIFLGAQLSNGDFLMLTDTRHPAYLIPELYRTLCGRTQCCGGDLI TGNRHMRKQPFFKLLRREYVGEALQTEDISAFRKILLQDDTGTVWLPYTELERSLITWQD RLYSLMITYGNCVLTYIGMGVFILLTGVPCFLLFMMFLDLLYAVLLYTGLFISLLFLFTR FRHHPYFFRHEQLLLTDIRESTLPNPPIQKPDISKL >gi|312954207|gb|AENW01000056.1| GENE 180 187651 - 188340 806 229 aa, chain + ## HITS:1 COG:BS_yrkP KEGG:ns NR:ns ## COG: BS_yrkP COG0745 # Protein_GI_number: 16079696 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 1 228 1 228 231 221 50.0 7e-58 MGSRILIVDDNQEIREVVTVLLENEGYEVEEAGDGEAAVAKAEDMDLIILDVMMPKMDGF KACRQIREVTNAPILFLTAKTMDQDKALGFSSGGDDYLAKPFSYNELIARVKALLRRYCI YKGKEEPQEGDQIIMHDLIISRNSNQVKKKEEAVNLTEMEYQILLLLADHPKKIFSNQEL YEAIWKGPYMYSANNTIMVHIRNLRKKLGVDPQNPVYIKTVWGKGYRFD >gi|312954207|gb|AENW01000056.1| GENE 181 188333 - 189676 1320 447 aa, chain + ## HITS:1 COG:BS_yrkQ KEGG:ns NR:ns ## COG: BS_yrkQ COG0642 # Protein_GI_number: 16079695 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 18 442 8 427 432 140 25.0 6e-33 MIKKKSPVGTRKKHISKLSLKFIGIVILAAVVSASLFGFLFFNRYRMFHLAVGEEAVKKE TSEQIQTLQDTITKKDISKKNKKAIKREMRKYKDLTLYLYDDEDTLSETSFSTMEDQAYV GTMSFWLNLYEPDDQEYTLKFHDGEAYLVVYSFIGLSFMIRFLIVAAVASILLFIVVIMQ FVHRKMKYVLSIEEEMQLIEAGDFHHTIIYKGNDELTDLARQLNHLRNALYDNMLKEEEA RNANQELVTAMSHDLRTPLTSLLGYLDILQMKIYKSDAARDDYIRKSRQKAEQIKDMSDK LFNHFLVYSRDEELQLHPIEGQAVLNMLEFYCEELREQKFEILTKFERGSWKIMGEEAML MRVFDNVFSNIRKYGDKHIVTVSLQVEKGNVLIRLKNRKKKDASREESTQIGLKSVNKIM KGMNGSFLYENDDTEFVVELFFPCRQE >gi|312954207|gb|AENW01000056.1| GENE 182 189894 - 190670 841 258 aa, chain - ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 4 256 3 256 256 134 36.0 1e-31 MNRQILFFDIDGTLVDSTTHIVPASTRAALQKLKKAGHILCISTGRSLQSVTDGHFDELI DWDIFLCNNGQAIYNHDKSLLHMTPIPRESVEACIQAAETQEAPLLIMGKKQILTRKPNA YVITSAEFFKESIPDVEAYDGSDVIMMIAYGPMGYAYEEYMAIPSVDVLIGQSTYADVVL KGFSKAIGIRFILDHFQMQDYLAFGDSLNDVEMLQHARIGVAMGNAHEEAKRAADIITRD VSEDGIYHALRQMRLLDL >gi|312954207|gb|AENW01000056.1| GENE 183 190948 - 192303 1464 451 aa, chain + ## HITS:1 COG:BH0065 KEGG:ns NR:ns ## COG: BH0065 COG1207 # Protein_GI_number: 15612628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Bacillus halodurans # 4 450 6 455 455 444 51.0 1e-124 MKSAIVLAAGKGTRMKSALNKVMHPVLNKPMIGHIVDTLKASGVERIVVVVGHGAESVKE YLQDSVEYAIQQPQLGTGHAVMQASVLEGLDGDTIVVNGDGPCIQKETIQKVFESNRDAA CTVLTSVLPDGERYGRIIRNAQGMVEKIVEAKDCSEEELEVKEINTGIFCFNNKALFEGL KEITNSNAQQEYYLTDLVEIFNKKDLCVNAMIVDDPKEAMGVNDRVDLAKANAWMKRHVN EAHMRAGVTIIDPDNTYIDVDAVIGEDTVIYPNVHIQGKTVIGKNTVILPNSFLRNAVIG DDVTIDSSKIVESSVGNRSTVGPMSHLRNNTEICEDCRIGNFVEFKNSHFGDGSKCAHLT YIGDSDFGKKINVGCGVVTVNYDGKHKFRTTVHDGAFIGSNCNLIAPVTIGENALLAAGS TITDSVDDGDMGIARARQSIKKGFGTTYKNK >gi|312954207|gb|AENW01000056.1| GENE 184 192327 - 193280 994 317 aa, chain + ## HITS:1 COG:BS_prs KEGG:ns NR:ns ## COG: BS_prs COG0462 # Protein_GI_number: 16077119 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Bacillus subtilis # 7 309 12 313 317 345 56.0 1e-94 MENKTVVFALTSSVELANEIVGELGIPLGQCDVKHFSDGEIMVELGESVRGKNVYIVQST CAPVSSNIMEVLIAIDACKRASAGHISVVMPYFGYARQDRKAKPRQPITSKLVADLLERA GANRVITMELHATQIQGFFDIPADDISAICIIGQYFKSLNLKDVVVVSPDHGGTTRARRL AEILHAPLAIIDKRRPKPNVAEAMNIIGDVNGKIAIVVDDIVDTAGTLTAGIQMLYDKGA TAVYASCVHGVLSGPAIDRLKAANLEEFVCTNTIPQDDKAALYPQMKVLSVGPVLGQVIK AVEESRPVSEIVAKYAE >gi|312954207|gb|AENW01000056.1| GENE 185 193303 - 193659 451 118 aa, chain + ## HITS:1 COG:no KEGG:CLH_2672 NR:ns ## KEGG: CLH_2672 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 110 1 110 110 103 50.0 3e-21 MLEHFIEFMLPEIVSILEIIGIVVITIGSLKAFYHYIKALFTHKHYPIRIELANALALGL EFKMGAEILKTVLVRSFSEIYILGAIILLRALLSLMIHFEIKTEKEHGSASEASPNNY >gi|312954207|gb|AENW01000056.1| GENE 186 194294 - 195943 1370 549 aa, chain - ## HITS:1 COG:lin1222 KEGG:ns NR:ns ## COG: lin1222 COG0366 # Protein_GI_number: 16800291 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Listeria innocua # 3 543 4 544 548 612 54.0 1e-175 MNFKEKTVYQIYPKSFQDSNGDGWGDLQGVISRLDYLQKLGIEYIWFNAMFVSPQRDNGY DVEDYRAIDPRYGTMEDFTELCREAKKRGIDIMLDMVFNHASTRHVWFQKALKGEEKYKD YFFFRKGKADGSAPNNWNSKFGGPAWEYVKELDEYYLHLYDVTQADLNWDNSEVRKELAD IVNFWRSKGVHGFRFDVVNLVSKGSFEDDPNLFDGRQFYTDGPHIHEYLKELNLNSFGKD EDSMTVGEMSSTTLENCTRYSGSDAHELTSVFTFHHLKVDYRNKKKWELMPFDFMELKQL LNDWQTGMQEADAWNALFWCNHDQPRAISRFCDDKNYRIEAAKMLATVLHCMRGTPYVYQ GEEIGMTNAYFHDISQYRDVESTNFYDILKKEGHSKEEILHILQERSRDNARTPMQWNSK QNAGFTDGTPWLSVIDNYKTVNVENALQDENSVFYHYQKLIRMRKEYKVIQNGLYIPLLQ DHKTVFAYKRKGEEGELIVLSNFYAEAVRVEIKENLTDYVLLLSNYKDSKADKCITLRPY ESVIYYKAS >gi|312954207|gb|AENW01000056.1| GENE 187 195953 - 196624 420 223 aa, chain - ## HITS:1 COG:BH1515 KEGG:ns NR:ns ## COG: BH1515 COG2190 # Protein_GI_number: 15614078 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus halodurans # 57 223 5 170 173 131 44.0 9e-31 MIGSAVAAVISVGCEVQAFSIGVGGLPGIISIKSQFWLAFLAAMAAAIVIPFALTLLVGK KKLQQKEAAVIVSAEEESFHSPMSGICMPMEEVEDQAFASKAMGDGFAVELQDTRVLAPF SGTIMVAFPTGHAYGIKADNGKEVLIHIGMDTVELNGEGFHPHVKAGDVVKQGDVLVDVE LDVIKRKEKSLVSPVVFTDGTAITLEKQHEKIAAGDAHIITYK >gi|312954207|gb|AENW01000056.1| GENE 188 196724 - 197854 1023 376 aa, chain - ## HITS:1 COG:lin1223_2 KEGG:ns NR:ns ## COG: lin1223_2 COG1263 # Protein_GI_number: 16800292 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Listeria innocua # 98 375 1 280 403 349 63.0 5e-96 MFKEELMEKFQEDVKKLLLYVGGKENIQAVSHCVTRMRFVLVKPELADVAAIESLPSAKG TFTQSGQFQVIIGNEVSEFYNAFTAYAGIEGVSKDSLKSSAKSNQTVLQRIMGALGEIFA PLIPALICGGLILGFRNIIGEIAMFDGQTLAQASQFWNGVYSFLWLIGEAVFHMLPVGIV WSITKKMGTTQILGIILGLTLVSPQLLNGFQVAGTEASAIPVWNFDFTQIQMIGYQGQVI AAMMAGFVLVYLEKFFRKHCPAVISMIVVPFCSLIPAVVIAHTLVGPVGWTIGNAIADIV YNGLTSSFGVLFAAVFGLIYAPIVMTGLHHMTNAIDTTLTNMFGGTILWPMIALSNIAQG SSVLAMAVLQKKDEKA >gi|312954207|gb|AENW01000056.1| GENE 189 198020 - 198736 805 238 aa, chain - ## HITS:1 COG:BH0873 KEGG:ns NR:ns ## COG: BH0873 COG2188 # Protein_GI_number: 15613436 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 234 2 235 237 207 46.0 1e-53 MSKYKAIYKDILGRIEQNLYAAGDTLPGEYELMKIYEASRDTIRKALLLLAQNGYIQKSK GRGSIVLDRQRYDFPVSGVVSFKELADKMEQDVQTKVICLEKTHPDARIRQLFHMSPEDE IWLVQRVRIIDHEAVILDTDILDASIIPELNEEILEQSLYSYIEDTLHLKIAYAEKEITC QNVSGLDTKVLDMKQYDMVVNVESCSYLDDARIFQYTNARHRPDKFRFKDFARRVKLA >gi|312954207|gb|AENW01000056.1| GENE 190 198804 - 199307 386 167 aa, chain - ## HITS:1 COG:MA1614 KEGG:ns NR:ns ## COG: MA1614 COG2110 # Protein_GI_number: 20090472 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Methanosarcina acetivorans str.C2A # 2 161 29 191 195 203 62.0 1e-52 MIKILSGDITTLQVDAIVNAANVSLLGGGGVDGAIHRAAGPELLEECRTLHGCKTGEAKI TKGYRLPCSYVIHTPGPIWQGGNHGECELLESCYRSCMKLAKEYHITSIAFPAISTGVYH FPLEQAARIAIRTILEEKETCIKIVYLVCFDEITRQIYEAVRSEYDI >gi|312954207|gb|AENW01000056.1| GENE 191 199320 - 200084 919 254 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400087|ref|ZP_06644233.1| ## NR: gi|293400087|ref|ZP_06644233.1| hypothetical protein HMPREF0863_00370 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 253 1 254 258 271 50.0 3e-71 MLYDNRIAAAFLEGRPVTEEKHFYLLQEYKEADPKRRDIVQELDSQLESIVEEFPTFNKE LFEAVFPNYREQLKTVCIMAVVGTKENRIVKSEEGLCILIDLIHIADYTRIVSQMTYILQ NYLTFELSKYLIQKQFPVRSRKYLSLLNHLAFTNGLANYLAWNASCSSYKFYTQKYEAHK ERAFGLLSQALQVETKALQHKILVSAVTQEFWNQFPSVAGMFYFDDIYRDLGKEGIVLLY RHGPKNFIQTIFHE >gi|312954207|gb|AENW01000056.1| GENE 192 200204 - 200968 908 254 aa, chain + ## HITS:1 COG:CAC3017 KEGG:ns NR:ns ## COG: CAC3017 COG0726 # Protein_GI_number: 15896269 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 40 241 85 281 282 139 37.0 5e-33 MRKEVWRDVILSSVAFLALMWVAFFWAQKYFPMEQDSAAVAKVEEKKVAYLTFDDGPSKH TQEVLDILDTYHVKATFFVTGSNPEYYDLIKKADAKGHAIGIHTFSHDYGKIYSSEEAYF EDVNKTNALIEKQTGHKVNILRFPGGTSNTVSRKYSSGIMSTLAASVTQKGYEYYDWNAS NGDGNCYVGSDSLINTALKEIRDKKEVMILMHDGTGNKATVEALPTILKSMLSQGYEFRV IDSSTPVFHHHIAN >gi|312954207|gb|AENW01000056.1| GENE 193 201019 - 201789 636 256 aa, chain + ## HITS:1 COG:CAC0445_1 KEGG:ns NR:ns ## COG: CAC0445_1 COG2771 # Protein_GI_number: 15893736 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Clostridium acetobutylicum # 8 154 11 162 163 97 37.0 3e-20 MKITREKNLDEIKNGYTKDKRNFYHCNFCDAVFEDGEIFPINGHFYRAEKAVQMHIQKEH GSVFEQLLQLDKKSCSLTDVQKKLLQYIHEGKTDKEIASLTSTSASTVRHQRFVFREKAR QAKMYLALYELSVEGMMDNLLEVHDHAAQVDERYVATSEDEEQVLKTMTLSIDPLKLKQI PAKEKKKIIILRKICEFLEPHQVYSEEEINAFLKQIFEDFVSLRRYLIEYGFLHRTKDCQ FYSMDLGRIREVEDHE >gi|312954207|gb|AENW01000056.1| GENE 194 201889 - 202248 433 119 aa, chain + ## HITS:1 COG:no KEGG:TDE1368 NR:ns ## KEGG: TDE1368 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 115 1 115 122 79 37.0 4e-14 MQSIVHAYWNAIHELRFQDVRELFCDTAEITWPNTEEVFTLDEFIAVNEAYPGEWEEDVL KCYETGDMIISETMVKGQEVSFLAIGFFTIQGGKITALREYWTAVEAVPEWRKELLKSR >gi|312954207|gb|AENW01000056.1| GENE 195 202449 - 202703 265 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFATSLTSLACWLMAIVPGVYLLAYLSARYLHLPSAYYYTILALAATGYAIFLFLVYRL KCRIHNSARSRDGETSADCMNSDQ >gi|312954207|gb|AENW01000056.1| GENE 196 202784 - 204115 1433 443 aa, chain + ## HITS:1 COG:L0157 KEGG:ns NR:ns ## COG: L0157 COG0486 # Protein_GI_number: 15674224 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Lactococcus lactis # 4 443 8 455 455 386 48.0 1e-107 MLNDTIAAISTAAVDGAISIIRMSGADALSIADSILNFNVGEKKSHTISYGYVYDQEHDE LIDEVLVSVFRAPKTFTCEDIVEINCHGGRFITKKILRLCLAHGARLANPGEFTQRAFLN GRIDLTQAEAVNDMIQADTDENARMAVQGIRGSVRKLLEPLIQDLLDIIANIEVNIDYPE YDDVEQLSSDIIQPKAEEWMMRIRQILDRAQSGQLLKEGIKTAIVGKPNVGKSSLLNALL EEEKAIVTDIAGTTRDIVEGHIHLQGLTLNLIDTAGIRDTEDVVEQIGIRRSLQAISEAQ LVIVVLDSSHALDAQDEELLELTKDKTRIIVYNKTDISHRCEGICISAASGEIEPLMAKI HELFDGHQLVLQEPLLQNERQISLMMKAESCMRQALAAMKSKMELDIVAIDIQEAYTALK EILGEVHREDLLDTLFSNFCLGK >gi|312954207|gb|AENW01000056.1| GENE 197 204134 - 204901 767 255 aa, chain + ## HITS:1 COG:BS_yabD KEGG:ns NR:ns ## COG: BS_yabD COG0084 # Protein_GI_number: 16077107 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Bacillus subtilis # 4 253 2 252 255 208 42.0 8e-54 MNTLIDTHCHITCDALYERIDEVLENARQAGIEKMLIICTDFTEYERAQQLKEREPERFD IALGFHPNDLYAFQEADYERLEELLKQERLIAVGEIGLDYHWDDVKPQDQKTGFIRQIRL AQKYNKPILIHMREATKDTLDILKDMGPLKGIMHCYSGSKEVAMELIKIGFYISFGGPLT FKNSRGAPATAEALPLNRLFVETDSPYLTPHPFRGKQNEPMYVRYTFDKLCEIKAVEKDL AAEQLRKNYEELFLK >gi|312954207|gb|AENW01000056.1| GENE 198 205519 - 205881 483 120 aa, chain - ## HITS:1 COG:CAC1469 KEGG:ns NR:ns ## COG: CAC1469 COG1321 # Protein_GI_number: 15894748 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Clostridium acetobutylicum # 5 118 3 116 122 101 47.0 3e-22 MILGESLEDYLETLLILDNENGKIRCVDVAKKMDVSKPSVNKAMNVLKEKGLVQQETYGD IHFTPEGRELAVKVYQRHTTIRSFLEDVLGVAPDTAEEEACHIEHVISEDTFQKIKNFKR >gi|312954207|gb|AENW01000056.1| GENE 199 205925 - 206284 485 119 aa, chain - ## HITS:1 COG:BS_yusI KEGG:ns NR:ns ## COG: BS_yusI COG1393 # Protein_GI_number: 16080333 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Bacillus subtilis # 1 114 1 114 118 118 55.0 2e-27 MRMLFIEYPTCSTCRKAKKYLQDAGMELEIRHIVEETPTVEELRAWVKQSGLELKKFFNT SGNVYKELKLKDRLKALSEEEQLNLLAGNGMLIKRPLLICEKGIAVGFKEDKYKNLCSE Prediction of potential genes in microbial genomes Time: Sat May 14 03:18:53 2011 Seq name: gi|312954205|gb|AENW01000057.1| Clostridium sp. HGF2 contig00050, whole genome shotgun sequence Length of sequence - 504 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 60 - 284 82 ## Predicted protein(s) >gi|312954205|gb|AENW01000057.1| GENE 1 60 - 284 82 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQNILICLCRKSTVIDLVTQFKKTIQMLHGNKAMFMINDVDWCAMMLLTYDIQFINDTIE FFQDLYLMWKAILI Prediction of potential genes in microbial genomes Time: Sat May 14 03:20:16 2011 Seq name: gi|312953956|gb|AENW01000058.1| Clostridium sp. HGF2 contig00020, whole genome shotgun sequence Length of sequence - 245788 bp Number of predicted genes - 240, with homology - 224 Number of transcription units - 96, operones - 56 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 12.0 1 1 Op 1 15/0.000 + CDS 124 - 600 374 ## COG0597 Lipoprotein signal peptidase 2 1 Op 2 1/0.158 + CDS 588 - 1502 301 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 3 1 Op 3 . + CDS 1507 - 2760 1249 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 4 1 Op 4 . + CDS 2760 - 3254 608 ## COG2131 Deoxycytidylate deaminase + Term 3366 - 3420 6.4 - Term 3359 - 3403 -0.0 5 2 Tu 1 . - CDS 3435 - 4109 411 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 4256 - 4315 12.4 + Prom 4236 - 4295 10.0 6 3 Op 1 . + CDS 4345 - 4722 255 ## COG0251 Putative translation initiation inhibitor, yjgF family 7 3 Op 2 13/0.000 + CDS 4737 - 6371 1314 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 8 3 Op 3 . + CDS 6368 - 6703 372 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 6712 - 6749 6.6 9 4 Op 1 . + CDS 6759 - 7967 984 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 10 4 Op 2 . + CDS 7960 - 9432 1459 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 11 4 Op 3 . + CDS 9455 - 10444 616 ## COG3938 Proline racemase + Term 10478 - 10521 1.8 - Term 10559 - 10599 3.1 12 5 Tu 1 . - CDS 10606 - 11508 833 ## COG1039 Ribonuclease HIII - Prom 11549 - 11608 5.8 + Prom 11557 - 11616 8.6 13 6 Op 1 . + CDS 11643 - 12302 687 ## gi|293401506|ref|ZP_06645649.1| CvpA family protein 14 6 Op 2 . + CDS 12313 - 14646 2804 ## COG1193 Mismatch repair ATPase (MutS family) 15 6 Op 3 . + CDS 14646 - 16424 2124 ## COG0322 Nuclease subunit of the excinuclease complex 16 7 Tu 1 . + CDS 16545 - 16667 64 ## + Term 16668 - 16702 4.0 + Prom 16898 - 16957 4.5 17 8 Op 1 . + CDS 17037 - 17636 703 ## 18 8 Op 2 . + CDS 17695 - 18822 1646 ## COG1876 D-alanyl-D-alanine carboxypeptidase + Term 18823 - 18854 3.1 19 9 Op 1 . + CDS 18888 - 19868 1244 ## COG5401 Spore germination protein 20 9 Op 2 . + CDS 19932 - 20423 468 ## COG0622 Predicted phosphoesterase + Prom 20438 - 20497 1.6 21 10 Tu 1 . + CDS 20531 - 21721 1337 ## Cphy_2845 hypothetical protein + Term 21746 - 21779 5.1 + Prom 22107 - 22166 2.8 22 11 Tu 1 . + CDS 22237 - 22413 206 ## + Prom 22435 - 22494 2.6 23 12 Op 1 . + CDS 22515 - 23252 598 ## gi|293401516|ref|ZP_06645659.1| hypothetical protein HMPREF0863_01799 24 12 Op 2 2/0.158 + CDS 23258 - 23956 1015 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit + Term 24036 - 24075 7.1 + Prom 24025 - 24084 6.2 25 13 Op 1 . + CDS 24191 - 24970 1120 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 26 13 Op 2 . + CDS 25016 - 25261 242 ## gi|293401522|ref|ZP_06645665.1| hypothetical protein HMPREF0863_01805 + Prom 25263 - 25322 7.1 27 14 Op 1 . + CDS 25388 - 25789 529 ## COG1799 Uncharacterized protein conserved in bacteria 28 14 Op 2 . + CDS 25793 - 26545 226 ## PROTEIN SUPPORTED gi|227431973|ref|ZP_03913993.1| ribosomal protein S4e 29 14 Op 3 . + CDS 26560 - 27024 679 ## gi|293400859|ref|ZP_06645004.1| putative cell-division initiation protein DivIVA + Term 27218 - 27254 -1.0 + Prom 27105 - 27164 1.7 30 15 Tu 1 . + CDS 27267 - 29993 3449 ## COG0060 Isoleucyl-tRNA synthetase + Term 30031 - 30069 5.0 + Prom 30070 - 30129 5.5 31 16 Tu 1 . + CDS 30191 - 30922 174 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 32 17 Op 1 . + CDS 31307 - 31753 437 ## gi|293400856|ref|ZP_06645001.1| type II secretion pathway protein XcpT + Term 31758 - 31809 13.1 33 17 Op 2 7/0.053 + CDS 31826 - 32593 553 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 34 17 Op 3 . + CDS 32618 - 33814 1276 ## COG1459 Type II secretory pathway, component PulF 35 17 Op 4 . + CDS 33827 - 34738 823 ## gi|293400853|ref|ZP_06644998.1| hypothetical protein HMPREF0863_01138 36 17 Op 5 . + CDS 34749 - 35486 668 ## gi|293400852|ref|ZP_06644997.1| hypothetical protein HMPREF0863_01137 37 17 Op 6 . + CDS 35524 - 36081 573 ## gi|293400851|ref|ZP_06644996.1| conserved hypothetical protein 38 17 Op 7 . + CDS 36100 - 37143 735 ## gi|293400850|ref|ZP_06644995.1| hypothetical protein HMPREF0863_01135 39 17 Op 8 . + CDS 37161 - 38090 467 ## gi|293400849|ref|ZP_06644994.1| putative SPFH domain/Band 7 family protein 40 17 Op 9 . + CDS 38112 - 39602 405 ## gi|293400848|ref|ZP_06644993.1| putative prepilin-type N- cleavage/methylation domain protein 41 17 Op 10 2/0.158 + CDS 39626 - 41299 2070 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 42 17 Op 11 . + CDS 41311 - 42366 1244 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Prom 42380 - 42439 12.0 43 18 Op 1 40/0.000 + CDS 42681 - 43721 1321 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 44 18 Op 2 . + CDS 43734 - 46136 2854 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Term 46166 - 46221 6.7 - Term 46427 - 46471 2.4 45 19 Op 1 . - CDS 46505 - 47380 924 ## COG1408 Predicted phosphohydrolases 46 19 Op 2 . - CDS 47459 - 49297 1943 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily - Prom 49345 - 49404 8.3 47 20 Tu 1 . - CDS 49467 - 50021 647 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 50114 - 50173 8.1 + Prom 49992 - 50051 3.8 48 21 Op 1 . + CDS 50161 - 51393 1671 ## COG0772 Bacterial cell division membrane protein 49 21 Op 2 14/0.000 + CDS 51450 - 52091 371 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 50 21 Op 3 . + CDS 52088 - 52558 381 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 + Term 52716 - 52763 -0.6 - Term 52699 - 52756 10.4 51 22 Tu 1 . - CDS 52960 - 54618 928 ## - Prom 54771 - 54830 5.2 + Prom 54805 - 54864 5.4 52 23 Tu 1 . + CDS 54943 - 55818 837 ## gi|293400825|ref|ZP_06644970.1| hypothetical protein HMPREF0863_01110 + Term 55871 - 55914 10.4 - Term 55863 - 55898 2.6 53 24 Op 1 . - CDS 55921 - 56313 509 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 54 24 Op 2 . - CDS 56382 - 57260 1132 ## gi|293400823|ref|ZP_06644968.1| hypothetical protein HMPREF0863_01108 55 24 Op 3 . - CDS 57274 - 58272 1223 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 58293 - 58352 6.2 + Prom 58372 - 58431 7.9 56 25 Op 1 41/0.000 + CDS 58553 - 59368 965 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 57 25 Op 2 24/0.000 + CDS 59370 - 60158 919 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 58 25 Op 3 19/0.000 + CDS 60151 - 61383 1519 ## COG0520 Selenocysteine lyase 59 25 Op 4 6/0.053 + CDS 61396 - 61845 725 ## COG0822 NifU homolog involved in Fe-S cluster formation 60 25 Op 5 . + CDS 61838 - 63238 1730 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 61 25 Op 6 . + CDS 63231 - 63749 452 ## COG0212 5-formyltetrahydrofolate cyclo-ligase + Term 63751 - 63789 6.1 + Prom 63881 - 63940 5.8 62 26 Op 1 . + CDS 63978 - 64721 682 ## CTC00594 platelet activating factor acetylhydrolase-like protein 63 26 Op 2 . + CDS 64748 - 65176 486 ## NT01CX_1335 putative lipoprotein 64 26 Op 3 . + CDS 65184 - 66566 1090 ## COG1696 Predicted membrane protein involved in D-alanine export 65 26 Op 4 . + CDS 66579 - 67721 1127 ## BBR47_29640 hypothetical protein 66 26 Op 5 . + CDS 67780 - 69183 1458 ## gi|293400815|ref|ZP_06644960.1| GntR family transcriptional regulator + Term 69243 - 69284 3.1 + Prom 69622 - 69681 5.2 67 27 Tu 1 . + CDS 69740 - 70366 401 ## CTC00594 platelet activating factor acetylhydrolase-like protein + Term 70522 - 70554 -0.9 - Term 70437 - 70491 3.7 68 28 Tu 1 . - CDS 70502 - 72043 1685 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) + Prom 72139 - 72198 7.8 69 29 Op 1 4/0.053 + CDS 72226 - 73437 1105 ## COG0373 Glutamyl-tRNA reductase 70 29 Op 2 6/0.053 + CDS 73440 - 74339 999 ## COG0181 Porphobilinogen deaminase 71 29 Op 3 2/0.158 + CDS 74336 - 75796 1495 ## COG0007 Uroporphyrinogen-III methylase 72 29 Op 4 7/0.053 + CDS 75789 - 76760 1274 ## COG0113 Delta-aminolevulinic acid dehydratase 73 29 Op 5 . + CDS 76762 - 78051 1130 ## COG0001 Glutamate-1-semialdehyde aminotransferase 74 29 Op 6 . + CDS 78048 - 79292 1064 ## Gbem_0405 siroheme synthase (EC:1.3.1.76) + Prom 79449 - 79508 4.1 75 30 Tu 1 . + CDS 79579 - 81027 1456 ## COG1027 Aspartate ammonia-lyase + Term 81069 - 81114 2.0 + Prom 81083 - 81142 2.2 76 31 Op 1 . + CDS 81242 - 82429 1597 ## COG1686 D-alanyl-D-alanine carboxypeptidase 77 31 Op 2 . + CDS 82507 - 82668 217 ## 78 32 Op 1 . - CDS 83437 - 84021 335 ## Cthe_0203 response regulator receiver/ANTAR domain-containing protein 79 32 Op 2 . - CDS 84050 - 85261 197 ## COG0174 Glutamine synthetase 80 32 Op 3 9/0.053 - CDS 85280 - 86002 544 ## COG0070 Glutamate synthase domain 3 - Prom 86034 - 86093 2.8 81 33 Tu 1 6/0.053 - CDS 86115 - 87272 739 ## COG0069 Glutamate synthase domain 2 - Prom 87368 - 87427 6.8 82 34 Tu 1 . - CDS 87611 - 88714 522 ## COG0067 Glutamate synthase domain 1 - Prom 88810 - 88869 6.0 + Prom 88929 - 88988 5.8 83 35 Tu 1 . + CDS 89018 - 90352 968 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 90370 - 90428 9.3 + Prom 90371 - 90430 3.9 84 36 Op 1 . + CDS 90467 - 92563 1134 ## COG3968 Uncharacterized protein related to glutamine synthetase 85 36 Op 2 . + CDS 92587 - 94299 1038 ## COG0004 Ammonia permease + Prom 94379 - 94438 2.6 86 37 Op 1 . + CDS 94580 - 96148 679 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) 87 37 Op 2 . + CDS 96196 - 97623 791 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 88 38 Op 1 8/0.053 + CDS 98184 - 98501 327 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 89 38 Op 2 6/0.053 + CDS 98498 - 98935 538 ## COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) 90 38 Op 3 . + CDS 98913 - 99638 937 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit + Prom 99702 - 99761 4.7 91 39 Op 1 . + CDS 99786 - 100439 708 ## gi|293400807|ref|ZP_06644952.1| acetyltransferase, GNAT family 92 39 Op 2 . + CDS 100432 - 101484 1360 ## Sterm_3020 hypothetical protein + Term 101485 - 101511 -1.0 + Prom 101655 - 101714 2.0 93 40 Tu 1 . + CDS 101749 - 102477 950 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit + Term 102633 - 102663 1.2 - Term 102621 - 102651 1.2 94 41 Op 1 . - CDS 102681 - 103721 1268 ## COG1363 Cellulase M and related proteins 95 41 Op 2 11/0.053 - CDS 103743 - 104999 1330 ## COG0477 Permeases of the major facilitator superfamily 96 41 Op 3 . - CDS 105065 - 105796 844 ## COG1309 Transcriptional regulator - Prom 105821 - 105880 3.8 + Prom 105686 - 105745 4.9 97 42 Op 1 6/0.053 + CDS 105873 - 106397 558 ## COG2179 Predicted hydrolase of the HAD superfamily 98 42 Op 2 2/0.158 + CDS 106390 - 107472 1382 ## COG1161 Predicted GTPases 99 42 Op 3 7/0.053 + CDS 107472 - 107756 217 ## PROTEIN SUPPORTED gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 100 42 Op 4 14/0.000 + CDS 107760 - 108788 1014 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 101 42 Op 5 6/0.053 + CDS 108805 - 109143 467 ## COG0799 Uncharacterized homolog of plant Iojap protein 102 42 Op 6 1/0.158 + CDS 109140 - 109853 905 ## COG0500 SAM-dependent methyltransferases 103 42 Op 7 . + CDS 109850 - 110530 806 ## COG0775 Nucleoside phosphorylase + Term 110531 - 110559 -1.0 + Prom 110629 - 110688 7.4 104 43 Op 1 . + CDS 110711 - 111169 653 ## gi|293400782|ref|ZP_06644927.1| hypothetical protein HMPREF0863_01067 105 43 Op 2 6/0.053 + CDS 111171 - 111707 825 ## COG3935 Putative primosome component and related proteins 106 43 Op 3 . + CDS 111707 - 112354 827 ## COG0177 Predicted EndoIII-related endonuclease + Term 112357 - 112385 -1.0 - Term 112520 - 112556 4.2 107 44 Op 1 7/0.053 - CDS 112578 - 115871 3168 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 108 44 Op 2 7/0.053 - CDS 115840 - 116457 335 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase - Prom 116522 - 116581 3.2 - Term 116546 - 116583 5.1 109 45 Tu 1 . - CDS 116589 - 119240 2769 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 119340 - 119399 5.8 + Prom 119442 - 119501 5.6 110 46 Tu 1 . + CDS 119553 - 119876 533 ## gi|293400777|ref|ZP_06644922.1| putative cell division protein DivIVA 111 47 Op 1 . + CDS 120282 - 120470 58 ## + Term 120494 - 120529 -0.2 112 47 Op 2 5/0.053 + CDS 120542 - 121486 1180 ## COG1426 Uncharacterized protein conserved in bacteria 113 47 Op 3 6/0.053 + CDS 121461 - 122060 263 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 114 47 Op 4 12/0.000 + CDS 122063 - 122524 201 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 115 47 Op 5 4/0.053 + CDS 122558 - 123610 1407 ## COG0468 RecA/RadA recombinase + Term 123655 - 123689 3.0 + Prom 123660 - 123719 4.6 116 48 Op 1 2/0.158 + CDS 123763 - 125316 1810 ## COG1418 Predicted HD superfamily hydrolase 117 48 Op 2 . + CDS 125318 - 126103 780 ## COG1692 Uncharacterized protein conserved in bacteria + Term 126105 - 126135 1.0 + Prom 126172 - 126231 5.8 118 49 Op 1 . + CDS 126253 - 126426 159 ## gi|160915265|ref|ZP_02077478.1| hypothetical protein EUBDOL_01273 + Term 126428 - 126457 -0.3 119 49 Op 2 . + CDS 126500 - 127936 583 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 + Prom 127998 - 128057 9.6 120 50 Op 1 2/0.158 + CDS 128138 - 129796 1955 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 121 50 Op 2 . + CDS 129827 - 132187 2805 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 132188 - 132224 5.0 + Prom 132228 - 132287 7.0 122 51 Op 1 15/0.000 + CDS 132327 - 133430 1358 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 133443 - 133493 8.0 + Prom 133477 - 133536 8.6 123 51 Op 2 24/0.000 + CDS 133581 - 135185 177 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 124 51 Op 3 26/0.000 + CDS 135163 - 136260 1502 ## COG4603 ABC-type uncharacterized transport system, permease component 125 51 Op 4 1/0.158 + CDS 136264 - 137217 1045 ## COG1079 Uncharacterized ABC-type transport system, permease component + Prom 137225 - 137284 3.9 126 52 Op 1 14/0.000 + CDS 137335 - 138591 1468 ## COG0612 Predicted Zn-dependent peptidases 127 52 Op 2 . + CDS 138572 - 139855 1395 ## COG0612 Predicted Zn-dependent peptidases + Term 139876 - 139929 10.4 + Prom 139899 - 139958 4.0 128 53 Tu 1 . + CDS 140058 - 140378 382 ## COG0629 Single-stranded DNA-binding protein + Term 140436 - 140478 8.3 - Term 140421 - 140467 6.4 129 54 Tu 1 . - CDS 140468 - 141070 682 ## PROTEIN SUPPORTED gi|229543523|ref|ZP_04432583.1| ribosomal protein S4 - Prom 141244 - 141303 9.3 + Prom 141519 - 141578 3.8 130 55 Op 1 3/0.053 + CDS 141606 - 143360 2044 ## COG4477 Negative regulator of septation ring formation 131 55 Op 2 7/0.053 + CDS 143362 - 144492 1011 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 132 55 Op 3 . + CDS 144473 - 145681 1290 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase 133 56 Op 1 . - CDS 145801 - 145971 217 ## 134 56 Op 2 . - CDS 146017 - 146559 739 ## COG0778 Nitroreductase - Prom 146585 - 146644 3.2 + Prom 146513 - 146572 5.2 135 57 Op 1 . + CDS 146672 - 147490 845 ## COG0500 SAM-dependent methyltransferases 136 57 Op 2 . + CDS 147528 - 148940 1584 ## COG0541 Signal recognition particle GTPase + Term 148941 - 148971 1.2 + Prom 148961 - 149020 3.4 137 58 Tu 1 . + CDS 149096 - 150076 1022 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 150158 - 150202 5.2 + Prom 150448 - 150507 6.2 138 59 Op 1 . + CDS 150539 - 150766 153 ## gi|154483461|ref|ZP_02025909.1| hypothetical protein EUBVEN_01165 139 59 Op 2 . + CDS 150727 - 150936 235 ## gi|293400386|ref|ZP_06644532.1| RNA polymerase sigma factor, sigma-70 family + Term 151098 - 151143 -0.5 140 60 Tu 1 . + CDS 151153 - 151368 151 ## 141 61 Tu 1 . + CDS 151471 - 152232 576 ## + Term 152387 - 152414 0.1 + Prom 152288 - 152347 3.3 142 62 Tu 1 . + CDS 152450 - 153319 762 ## gi|160914471|ref|ZP_02076686.1| hypothetical protein EUBDOL_00475 + Term 153494 - 153538 2.0 + Prom 153722 - 153781 6.1 143 63 Tu 1 . + CDS 153934 - 156612 1803 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 156627 - 156667 0.6 + Prom 156842 - 156901 7.8 144 64 Op 1 . + CDS 156938 - 157210 358 ## PROTEIN SUPPORTED gi|227518885|ref|ZP_03948934.1| ribosomal protein S16 145 64 Op 2 . + CDS 157217 - 157465 294 ## gi|160915186|ref|ZP_02077399.1| hypothetical protein EUBDOL_01194 146 64 Op 3 30/0.000 + CDS 157502 - 158005 847 ## COG0806 RimM protein, required for 16S rRNA processing 147 64 Op 4 . + CDS 158002 - 158739 645 ## COG0336 tRNA-(guanine-N1)-methyltransferase + Prom 158830 - 158889 8.0 148 65 Tu 1 . + CDS 159092 - 159679 520 ## COG1573 Uracil-DNA glycosylase + Term 159697 - 159733 0.6 + Prom 159705 - 159764 7.8 149 66 Op 1 5/0.053 + CDS 159949 - 160296 405 ## PROTEIN SUPPORTED gi|167756888|ref|ZP_02429015.1| hypothetical protein CLORAM_02437 + Term 160301 - 160343 3.3 150 66 Op 2 2/0.158 + CDS 160352 - 160954 805 ## COG0681 Signal peptidase I 151 66 Op 3 2/0.158 + CDS 160958 - 161551 682 ## COG0681 Signal peptidase I 152 66 Op 4 8/0.053 + CDS 161541 - 162407 1112 ## COG1161 Predicted GTPases 153 66 Op 5 . + CDS 162391 - 163014 607 ## COG0164 Ribonuclease HII + Prom 163025 - 163084 5.7 154 67 Op 1 . + CDS 163144 - 163521 435 ## ACL_0835 hypothetical protein 155 67 Op 2 26/0.000 + CDS 163529 - 163960 530 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 156 67 Op 3 . + CDS 163983 - 164927 1364 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 164967 - 165005 2.2 + Prom 164957 - 165016 4.4 157 68 Op 1 13/0.000 + CDS 165042 - 165773 765 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 158 68 Op 2 6/0.053 + CDS 165844 - 168090 2966 ## COG0550 Topoisomerase IA 159 68 Op 3 5/0.053 + CDS 168090 - 169385 1684 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation 160 68 Op 4 . + CDS 169385 - 170293 919 ## COG4974 Site-specific recombinase XerD 161 68 Op 5 . + CDS 170265 - 170474 166 ## 162 68 Op 6 38/0.000 + CDS 170465 - 171418 901 ## PROTEIN SUPPORTED gi|237734605|ref|ZP_04565086.1| 30S ribosomal protein S2 163 68 Op 7 24/0.000 + CDS 171455 - 172342 549 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Prom 172430 - 172489 6.4 164 68 Op 8 33/0.000 + CDS 172541 - 173254 1005 ## COG0528 Uridylate kinase 165 68 Op 9 19/0.000 + CDS 173259 - 173801 738 ## COG0233 Ribosome recycling factor + Term 173812 - 173847 0.1 + Prom 173870 - 173929 4.7 166 68 Op 10 32/0.000 + CDS 173973 - 174677 820 ## COG0020 Undecaprenyl pyrophosphate synthase 167 68 Op 11 15/0.000 + CDS 174679 - 175452 837 ## COG0575 CDP-diglyceride synthetase 168 68 Op 12 17/0.000 + CDS 175449 - 176615 1360 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 169 68 Op 13 . + CDS 176612 - 177670 1342 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Term 177683 - 177728 9.1 + Prom 177722 - 177781 2.9 170 69 Tu 1 . + CDS 177918 - 178406 314 ## + Term 178619 - 178652 -0.7 - Term 178264 - 178298 -0.6 171 70 Op 1 . - CDS 178511 - 179638 1142 ## COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain - Term 179673 - 179708 2.8 172 70 Op 2 . - CDS 179709 - 179975 233 ## PROTEIN SUPPORTED gi|167755666|ref|ZP_02427793.1| hypothetical protein CLORAM_01181 - Prom 180000 - 180059 11.3 + Prom 179987 - 180046 2.9 173 71 Op 1 . + CDS 180080 - 180955 1266 ## Thit_0885 spore protease (EC:3.4.24.78) 174 71 Op 2 . + CDS 181036 - 181992 1254 ## GWCH70_2443 stage II sporulation protein P 175 71 Op 3 . + CDS 181999 - 182295 394 ## gi|293400537|ref|ZP_06644682.1| hypothetical protein HMPREF0863_00822 + Prom 182309 - 182368 6.4 176 72 Tu 1 . + CDS 182411 - 183322 1169 ## COG0223 Methionyl-tRNA formyltransferase + Term 183336 - 183371 4.2 + Prom 183331 - 183390 3.5 177 73 Tu 1 . + CDS 183498 - 183659 140 ## + Term 183766 - 183808 5.1 + Prom 183690 - 183749 5.2 178 74 Op 1 . + CDS 183960 - 185768 2299 ## COG0481 Membrane GTPase LepA + Term 185770 - 185800 -0.9 + Prom 185777 - 185836 2.1 179 74 Op 2 . + CDS 185859 - 186701 877 ## gi|160915157|ref|ZP_02077370.1| hypothetical protein EUBDOL_01165 180 74 Op 3 . + CDS 186711 - 187814 1002 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 181 74 Op 4 . + CDS 187811 - 188839 1062 ## SSU05_0899 hypothetical protein + Prom 188841 - 188900 3.1 182 75 Op 1 26/0.000 + CDS 188962 - 189228 332 ## PROTEIN SUPPORTED gi|220931633|ref|YP_002508541.1| ribosomal protein S15 + Prom 189233 - 189292 4.9 183 75 Op 2 . + CDS 189317 - 191494 1682 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 191505 - 191541 2.2 + Prom 191527 - 191586 7.3 184 76 Op 1 . + CDS 191689 - 193080 1807 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 185 76 Op 2 . + CDS 193099 - 193770 789 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 186 76 Op 3 . + CDS 193799 - 194128 473 ## COG0526 Thiol-disulfide isomerase and thioredoxins 187 76 Op 4 . + CDS 194146 - 194859 994 ## gi|160915063|ref|ZP_02077276.1| hypothetical protein EUBDOL_01071 188 76 Op 5 . + CDS 194874 - 196178 1665 ## COG0773 UDP-N-acetylmuramate-alanine ligase 189 76 Op 6 . + CDS 196229 - 196606 559 ## gi|293400554|ref|ZP_06644699.1| signal Transduction Histidine Kinase (STHK) with CheB and CheR activity 190 76 Op 7 . + CDS 196609 - 197160 659 ## gi|160915066|ref|ZP_02077279.1| hypothetical protein EUBDOL_01074 191 76 Op 8 1/0.158 + CDS 197167 - 198162 1473 ## COG1609 Transcriptional regulators + Term 198385 - 198417 2.3 + Prom 198355 - 198414 3.4 192 77 Tu 1 . + CDS 198434 - 199666 608 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 199685 - 199731 10.2 193 78 Op 1 . + CDS 199870 - 200610 679 ## Athe_0978 dipicolinate synthase subunit A 194 78 Op 2 . + CDS 200600 - 201178 564 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 195 78 Op 3 . + CDS 201182 - 202048 877 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 196 78 Op 4 . + CDS 202075 - 202254 319 ## GC56T3_0656 hypothetical protein 197 78 Op 5 . + CDS 202298 - 202462 97 ## + Term 202465 - 202491 -0.6 + Prom 202649 - 202708 8.9 198 79 Op 1 33/0.000 + CDS 202748 - 203680 1109 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 199 79 Op 2 20/0.000 + CDS 203682 - 204662 1054 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 200 79 Op 3 35/0.000 + CDS 204662 - 205669 873 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 201 79 Op 4 . + CDS 205674 - 206474 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 206500 - 206553 4.4 + Prom 206585 - 206644 4.6 202 80 Op 1 . + CDS 206721 - 207245 664 ## gi|293400566|ref|ZP_06644711.1| conserved hypothetical protein 203 80 Op 2 2/0.158 + CDS 207269 - 208921 1950 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 204 80 Op 3 . + CDS 208926 - 209627 916 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 205 80 Op 4 . + CDS 209624 - 210085 212 ## COG0262 Dihydrofolate reductase 206 80 Op 5 . + CDS 210106 - 211407 1724 ## COG0213 Thymidine phosphorylase + Term 211434 - 211474 -0.3 + Prom 211456 - 211515 2.8 207 80 Op 6 . + CDS 211543 - 211788 270 ## + Term 211957 - 212003 10.7 - Term 211943 - 211992 12.2 208 81 Tu 1 . - CDS 212043 - 212603 106 ## gi|160913571|ref|ZP_02076261.1| hypothetical protein EUBDOL_00047 - Prom 212672 - 212731 10.8 - Term 213070 - 213105 2.0 209 82 Op 1 1/0.158 - CDS 213310 - 213642 536 ## COG0662 Mannose-6-phosphate isomerase 210 82 Op 2 . - CDS 213632 - 214231 732 ## COG1309 Transcriptional regulator - Prom 214251 - 214310 9.4 + Prom 214210 - 214269 5.7 211 83 Tu 1 . + CDS 214342 - 215505 1271 ## COG0477 Permeases of the major facilitator superfamily + Term 215699 - 215730 1.0 + Prom 215518 - 215577 4.1 212 84 Op 1 . + CDS 215744 - 216265 526 ## gi|293400576|ref|ZP_06644721.1| hypothetical protein HMPREF0863_00861 213 84 Op 2 . + CDS 216243 - 217016 1024 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 214 84 Op 3 . + CDS 217055 - 217621 607 ## COG1238 Predicted membrane protein + Term 217755 - 217789 1.9 215 85 Op 1 . - CDS 217594 - 218241 694 ## COG2071 Predicted glutamine amidotransferases 216 85 Op 2 . - CDS 218287 - 219318 866 ## COG1242 Predicted Fe-S oxidoreductase - Prom 219434 - 219493 6.0 + Prom 219316 - 219375 6.7 217 86 Op 1 . + CDS 219416 - 220099 655 ## COG1451 Predicted metal-dependent hydrolase 218 86 Op 2 . + CDS 220118 - 220951 958 ## COG1307 Uncharacterized protein conserved in bacteria 219 86 Op 3 . + CDS 220988 - 221392 488 ## GAU_3654 hypothetical membrane protein 220 86 Op 4 . + CDS 221385 - 222425 1523 ## COG1363 Cellulase M and related proteins 221 86 Op 5 . + CDS 222443 - 223216 757 ## COG0327 Uncharacterized conserved protein 222 86 Op 6 . + CDS 223240 - 223392 72 ## + Term 223445 - 223499 12.1 - Term 223438 - 223479 3.5 223 87 Tu 1 . - CDS 223709 - 224428 276 ## - Prom 224643 - 224702 7.4 + Prom 224405 - 224464 4.3 224 88 Tu 1 . + CDS 224677 - 225672 899 ## COG0469 Pyruvate kinase + Term 225681 - 225736 7.0 - Term 225668 - 225700 -0.3 225 89 Op 1 . - CDS 225778 - 226794 1541 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 226 89 Op 2 . - CDS 226814 - 228079 1492 ## COG0169 Shikimate 5-dehydrogenase - Prom 228299 - 228358 4.7 - Term 228140 - 228177 0.4 227 90 Tu 1 . - CDS 228382 - 229287 1079 ## COG0583 Transcriptional regulator - Prom 229353 - 229412 5.6 + Prom 229343 - 229402 10.1 228 91 Op 1 1/0.158 + CDS 229449 - 231443 2504 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 229 91 Op 2 4/0.053 + CDS 231482 - 232354 1227 ## COG0169 Shikimate 5-dehydrogenase 230 91 Op 3 . + CDS 232382 - 233560 1605 ## COG0477 Permeases of the major facilitator superfamily 231 91 Op 4 11/0.053 + CDS 233635 - 234147 702 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 232 91 Op 5 9/0.053 + CDS 234152 - 235444 652 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 233 91 Op 6 . + CDS 235458 - 236462 255 ## PROTEIN SUPPORTED gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 234 91 Op 7 . + CDS 236471 - 237232 838 ## COG0710 3-dehydroquinate dehydratase + Term 237249 - 237309 0.7 + Prom 237434 - 237493 6.3 235 92 Op 1 5/0.053 + CDS 237547 - 238389 1104 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 236 92 Op 2 . + CDS 238391 - 239776 1727 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 239791 - 239828 2.2 + Prom 239827 - 239886 7.1 237 93 Tu 1 . + CDS 240131 - 240373 306 ## gi|293400596|ref|ZP_06644741.1| conserved hypothetical protein + Term 240616 - 240651 3.5 + Prom 240592 - 240651 3.6 238 94 Tu 1 . + CDS 240671 - 243070 3137 ## COG0495 Leucyl-tRNA synthetase + Prom 243207 - 243266 5.1 239 95 Tu 1 . + CDS 243393 - 244259 924 ## COG1284 Uncharacterized conserved protein + Term 244342 - 244390 6.2 + Prom 244297 - 244356 8.7 240 96 Tu 1 . + CDS 244413 - 245654 863 ## CDR20291_1526 serine/alanine racemase Predicted protein(s) >gi|312953956|gb|AENW01000058.1| GENE 1 124 - 600 374 158 aa, chain + ## HITS:1 COG:BS_lsp KEGG:ns NR:ns ## COG: BS_lsp COG0597 # Protein_GI_number: 16078609 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Bacillus subtilis # 9 149 5 147 154 117 44.0 8e-27 MKAKHILMMAAVLLLDQLSKWGVQTSMQIDESFDVIPGFFRITYLHNTGAAWSMLEGKMV FFYLISIVFLIGMLYFYRTTDHRDRLTRIGVVLMMAGTLGNFIDRLIFQYVRDFLDFIIF GYDFPVFNVADISLCVGVGLIVLSMVLETYGGRRICAK >gi|312953956|gb|AENW01000058.1| GENE 2 588 - 1502 301 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 35 291 35 281 285 120 34 5e-26 MREIKIIAAAEDAGARIDKYISEQEDLSRSRVQALLAEGSILVNQNAVKANYKVKADDCI TAVFNDEMEMEARPEKMELDVRYEDEDVIVINKPKNIVVHPAAGNQSGTLVNGLLYHCKD LSGINGTLRPGIVHRIDKDTTGLLIIAKNDLAHASLSKQLQSKTVNRLYYALVHGVIQHD FGTIDAPIGRDVKDRQKMAVTATNSKDARTHFQVIERFENYTLVECRLETGRTHQIRVHM QYIGHPVVGDEKYSYRKTMQTNGQLLHAHQLTFQHPRTGEVMTVEAELPKQFADILEELR QESR >gi|312953956|gb|AENW01000058.1| GENE 3 1507 - 2760 1249 417 aa, chain + ## HITS:1 COG:PAB1920 KEGG:ns NR:ns ## COG: PAB1920 COG0705 # Protein_GI_number: 14520881 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Pyrococcus abyssi # 166 342 28 198 212 73 26.0 7e-13 MQISEYDLFAYQLLHYLVVQQHYRIVRVQQHKDDLWLMNENHQVYPVIRISSSGNAGTFA DTDYVRNVHRIILNLMHREGPMLILNTNPQSSPVHNAFLTQICITPSALSEPQLTSVFHG IDRVVHRVADPDKESSTLMAQVEEAELKQQQDFIKKARKKSIPRCTVAIMAICTIFLVLE YLLAYLDGNMESAIVAVGGYYKMSIVAAHEYWRILSGGFVHNGVVHFVISLYALYATGKL CEQRLGRGWYMAVFLSSVILGNAAQLIAAPNGIATGMSAGIFGVAAAYLTSQLLSHTLRH PLLRIPLYNCMAILAVLALVPSVSFIACIAGILCGILYGLWMHGRQSESGMKQHACLALV LYAASLFAYGAAVDTVAPLDRHLDEAIISVYRHTPLNAYAEYLQEHFHQQYEKTGGI >gi|312953956|gb|AENW01000058.1| GENE 4 2760 - 3254 608 164 aa, chain + ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 3 143 15 155 174 206 66.0 2e-53 MKREDVLTWDEYFMGLAHLSAKRSKDPSTQVGAVIVSSEHRVVSIGYNGFPNGCSDDEFP WDREGDFGNTKYPYVVHAELNAILNSKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVYE SDKYAHTEGTIASKRMLRSAGVELVQLPYAIDLQVSRKINPTIR >gi|312953956|gb|AENW01000058.1| GENE 5 3435 - 4109 411 224 aa, chain - ## HITS:1 COG:YPO0196 KEGG:ns NR:ns ## COG: YPO0196 COG2964 # Protein_GI_number: 16120535 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 218 22 233 244 169 42.0 4e-42 MKPQEVQLTLIDKMILQSYRSMVEGLGNYLGEAYEIVLHSLEDFQHSVIYINHGEHTGRK VGAPITDKALDFLIKFSENSSKQETYYSVNAKGEPLKSTTIAIKGENDRIIGLLCMNFYM NISFYDFIHTFVQKETLTAENDSATETFASNVDDMITSTLNTVKERIYNDPAISSSNKNK EIIYDLYNKGIFQIKDAVTVIAKLLNISKNTVYLHLRKCSNHKF >gi|312953956|gb|AENW01000058.1| GENE 6 4345 - 4722 255 125 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 1 125 12 136 137 139 56.0 9e-34 MNKIIDADSAPAAIGPYSQAVTNGNLLFVSGQLPIEPGQGVIVSGDIAEQARQSLENVKA ILEKAGYEMRDVVKTTCYLTEMENFAVVNEIYAEYFVGNYPARSCVSVKELPKQALFELE VIACK >gi|312953956|gb|AENW01000058.1| GENE 7 4737 - 6371 1314 544 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 131 534 4 433 444 151 30.0 3e-36 MKILLMCGAGASSGFMAQAMRKAAKEQGIENFEIIARSEAEMMNNLQGTDLVMFGPHLAF KREALEKDLKKFNIPFAFIDKDAYGSIDGAATLKQALDALREVKKPVEEISVKEEKPTQS SEASEEPAKGFMGWITKSLAPKLDKLTQNIYISAIQQSIMSILPMIMIGSVSSIVSVFRN FEVMSWIPDISMLNTYSFGLIAVFLAILVPMKVLEKRGNEKLKISAMLTSLALFFIITLP VIDGETGTMNFIMDKIGTGGMLTAVVTSVFTAWIFNFASRHSMFKEDTVMPDMVVAWMDA LVPVTITLAIGLFIMSTGFDLPLFIRGLFAPISSFGQTWLGLVMICFFTCFLYSFGFTWI LFPIAWAIWMEGMDANMAAVAAGQAASSINLMETVMGITYIGGQGCTLALVLMCMRSKVK KLKSIGRVCIFPAIFNINEPIVFGAPVVWNPILMIPLCLNSIIIPSLMYLVMRIGLVPIP SAPMQMWYLPNIVQGYLTTNSMSGVILVIALFAVSWLIWMPFFRVFEKQQYKEELENRKE REII >gi|312953956|gb|AENW01000058.1| GENE 8 6368 - 6703 372 111 aa, chain + ## HITS:1 COG:lin0917 KEGG:ns NR:ns ## COG: lin0917 COG1447 # Protein_GI_number: 16799988 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 7 108 15 116 116 61 39.0 3e-10 MKLENAQAAMQIILHAGDARLKTAEALKSLKTFDIERAKQQLLDANEDIVAAHQSQTASL QAESNGEEIEYSILFTHAQDTCMTVCSEINIAQQLVDICEAIDERFKKLEK >gi|312953956|gb|AENW01000058.1| GENE 9 6759 - 7967 984 402 aa, chain + ## HITS:1 COG:BH3313 KEGG:ns NR:ns ## COG: BH3313 COG1168 # Protein_GI_number: 15615875 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Bacillus halodurans # 13 394 12 393 397 182 30.0 1e-45 MNYFDNSNIKLDILKKKAYNLRWAEVADGTIPLTAADMDYPCAPAIKQALLAYVEEGYFS YTPKLGLPAFNQAFSNYVKETKGEEIKAEQVLAVDSAARAMFIVAKAFLKPGDEMIVFDP CDFLFRESCLAAGATPISYAAKLDTENRKMDLSRLEECISERTKMIGLCNPHNPYGLVYT KEELEAIMRLCEKHDLLIMNDEIWSDILYPDAQFNSIYCLGEERCKRVVSVFGFSKSFGL AGLRIGCVYANDDEKFQKLVDASDVLSTAGGATSLSQIAAIAAMEETQEWRAAFLKHITK NRDYAVAFINEHIPGLHAYRPQATFLLYVDIRELHVTGAEFVEFLKEEVQLAIVPGGHQY FGDESEGHVRICLATSMEILSEGLNRLKKGVEMLIERRTQHA >gi|312953956|gb|AENW01000058.1| GENE 10 7960 - 9432 1459 490 aa, chain + ## HITS:1 COG:CAC1405 KEGG:ns NR:ns ## COG: CAC1405 COG2723 # Protein_GI_number: 15894684 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 4 490 1 473 473 518 52.0 1e-147 MHKIQFPENFLWGGATSAYQCEGAWKEDGKGFAVTDLLTAGSREIPREFTPVEKDCYYPA AIAIDHYHHYKEDIALFAEMGFKVYRMSISWVRIFPNGDDEVPNPAGLAFYHKIFQECKK YDIEPLVTISHHDVPLALALKQDGWLSRKTIPAFVTYCKTIFREYRDEVKYWITFNEINM MTNYFGDIYTGGILSNGTRYLDIAQASEESLSADKMTKRFTALHHQFIASALAVQAGHDI NPDFQIGSMVAGDAHYPYSCNPVNVIEAQQSMNRLWYCGDVMVRGEYSYASRHYLKGKGV DIEALGITEEDKCILKKGTIDFLAFSYYTSGCHAVDEHHETTAGNFSLGVANPYLKKSDW GWVFDPQGLRWMLNELYGRYHIPVFIAENGLGAIDEVSEDGKVHDPYRIQYLNEHVSAMR DALEDGVDLLGYTWWGPIDLVSASTGEMKKRYGFIYVDMDDQGKGSLKRIRKDSFYHYQK IIQTNGSCIE >gi|312953956|gb|AENW01000058.1| GENE 11 9455 - 10444 616 329 aa, chain + ## HITS:1 COG:SMb20268 KEGG:ns NR:ns ## COG: SMb20268 COG3938 # Protein_GI_number: 16264006 # Func_class: E Amino acid transport and metabolism # Function: Proline racemase # Organism: Sinorhizobium meliloti # 1 329 1 332 333 206 35.0 4e-53 MQKIVFTTVETHTLGEPTRIITSGFPDIPGITMMEKKEILEQRYDHLRRALMCEPRGHKD MVGALILPAEHTASAFGVVFMDAKRWVNMCGHASIGCAMYAVEAGLVPVCEPHTEVVMDT PSGTICASVRVENKKAQEVTLHNVPSFLFADEVKVRVDGKEYRVAISFGGTFFALFDAAQ LSLQLDAKDIEFLIPFTRKLLAQLNKQYEIKHPSLAITRVVNAEYYVATGEKKQKNIVIA EEGQIDRSPCGTGTSAKLAYLHAKGNLSANEIFVNESFTGAKFYGRYEAEDVIGHYRGIQ PMITGSAYITGKAVYVIDENDPLTYGFTI >gi|312953956|gb|AENW01000058.1| GENE 12 10606 - 11508 833 300 aa, chain - ## HITS:1 COG:lin1191 KEGG:ns NR:ns ## COG: lin1191 COG1039 # Protein_GI_number: 16800260 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HIII # Organism: Listeria innocua # 1 299 1 303 308 212 41.0 9e-55 MGTCTIQTDRSSMMALKQRLKTAEIRKTPPYAIYQIKTRDCVITAYESGKLVFQGNGAEE CAALIAPSAIQKTQSGTTAKKTQGQPKAIYPQAGSDEVGTGDYFGPVTVCATCVRHEDVE FLRSLGIQDSKAIDDTAIRRMAPKLMERLPHSLLILDNATYNRIHGENNMVAIKSRMHNQ AYVHLRKKMGSLPQFCIIDQFVQKTSYYRYLKHEREVVYDIHFETKAENKYLSVAAGSII ARYAFLKAFDAMCEQYDFTFLKGAGSKVDQNIREFVAMHGKEALLQVAKLHFANTKKALG >gi|312953956|gb|AENW01000058.1| GENE 13 11643 - 12302 687 219 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401506|ref|ZP_06645649.1| ## NR: gi|293401506|ref|ZP_06645649.1| CvpA family protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 18 219 18 219 219 150 39.0 6e-35 MSLIMLVNMVILCVLCALVFGGYRDGFLLKLLSILSFFVCGFLAWWASSYVGSFIHLYPK HALPLQDTPLEAVLYDNLNRLLIFVILFVLLQLAVLVIKPFTKAANHVPVVSGINRLLGA ALGALQAVLLMVLAAMVCRLPFWKTGNEIASASLLRYSDGMMDALTFYAREPLQELSRLT SALDEKQTLRTAEKENIRSWLLEQNMKKEDVDTLLSALQ >gi|312953956|gb|AENW01000058.1| GENE 14 12313 - 14646 2804 777 aa, chain + ## HITS:1 COG:BH3106 KEGG:ns NR:ns ## COG: BH3106 COG1193 # Protein_GI_number: 15615668 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Bacillus halodurans # 1 771 1 785 785 453 37.0 1e-127 MKDMYEPLELHEVKEQVAKHASFSLGKQLIRQMMPRFDALWVRRELARVKEAYALVVRFG NMPFGGIHDTRDSIEAAMKDMTLTPHELRGIADSTRGVEQVRKYMKASDLDTPLIKELCD SFAEHQQLASSIDRCISLNAEVLDSASPALKSIRKSILSCNADISSEVQRFLSRNASKLM DTITTMRNNRTCVLVKISEKNSVDGFVHGESASGQTAYVEPRSLLVLNNRLQTLKSQEQE EITRILFELSQQVKSVGHELLSNLETFALLDSIFARGLWTKEMDGCIAELNTKDDHLYLK TARHPLIDPQKVVANTYEIRSPHHSLLITGSNTGGKTVTLKTIGLFVALTMSGLPLSAEQ AVVPLFDALYVDIGDDQSIQESLSTFSSHISKMADICDHATARSLVLLDELGSGTDPKEG EPLAVAVLDHLRAIGAMVIATTHYSALKTYGADNEDILLSSVEFDMEKMLPTYRYIEGIS GQSNAFEIARRYGLKESIIRFARERKEADRSKADIAMEKLEQSLMENYELKEKLAARLKD VRQLQADLEQEKKQLAQRREEILETVREDARKQLESSLEEAQDIIDELKHMHSEAKPHEI SDRKARLKQLSSMDDAETDATPQKLPSYQVGDYVKISKLSYYGEIISMNKDKVCVLANGM KMNTTLQEIEPAVKQVQKTKKKGYAKAGVRSFSMECNVIGMRVAEALPIIDKYLDNAMLA KANNVRIIHGMGTGALRKGVHDFLKRNPRVESFRMGGQGEGGLGATVVVLKQRGSGK >gi|312953956|gb|AENW01000058.1| GENE 15 14646 - 16424 2124 592 aa, chain + ## HITS:1 COG:BS_uvrC KEGG:ns NR:ns ## COG: BS_uvrC COG0322 # Protein_GI_number: 16079901 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Bacillus subtilis # 6 573 4 579 598 546 50.0 1e-155 MANMAKIEDKLKILPAMPGCYLMKNKDGDIIYVGKAKKLKQRVRQYFVGAHDFKTTRLVS NIDDFEYIVTSSEKEALLLEINLIKKHTPPYNIMFMDDKSYPYLKLTKENAPVLKVVRNT KDRKAHYFGPFPDSGAAWETAKLLNRIYPLRKCRRMPKKECLYYHMGQCLAPCIRDIDER VYADMVSGIQKFMRGDVREMLDTLHREMEQASEELLFEKAQEKLSLIHAIEHVTAKQQID FKDRKDRDVFGYYVDKGYISIQGFFLRGGKLLERTLSIEPLYENEADAFVSFILQYYANN PLPQEILIPKEYDITHLEEILDTKILQPLRGDKLKLVDMVLANAKNAHEQKFELVERKES RRYEGMEQLCNLLQKEIHRIELFDNSHISGTHNVSGMVVYRDGEPSKKDYRTFRLGEYIS DLDSMKEVIYRRYFRLLKEGARFPDLLIVDGGYLQIEAAREIIEALDIPLTICGLVKDDN HRTSNLMDVNGNILPVKRDSSLFFLLTQMQDEVHRFAISYHRKLRGKAMTKSILDEVEGI GEVRKKEIWKHFKSLKRLKEATIEEIRQVVPEKVAQNIYNILHNTDQKSEDA >gi|312953956|gb|AENW01000058.1| GENE 16 16545 - 16667 64 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNISDKTVRNHISNVMLKLGVKGRAQAVVELLKLEELTLE >gi|312953956|gb|AENW01000058.1| GENE 17 17037 - 17636 703 199 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNYFYTYVEDEQEVSSLQQIQTEMQRKNAAVCFFDYGSTAQWEQLQAVWKQSDILYIQDI AHLASEVQELKHRLSTLQKSGVCVRLRDERSVDLEQMLQLIDFVTGTIRKRNYALQLEGI QKALEKKRNGEGSYGRPKMVLPQDFEENIRKIMRKEMKHEDYQKQLGFKRSTYFKMVKEL RDGWKAQDEENETAALTQE >gi|312953956|gb|AENW01000058.1| GENE 18 17695 - 18822 1646 375 aa, chain + ## HITS:1 COG:BS_yodJ KEGG:ns NR:ns ## COG: BS_yodJ COG1876 # Protein_GI_number: 16079020 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 170 367 100 265 273 85 35.0 1e-16 MLLKRSVFVILLIALFSGCFYIMNQHYDELARYPHELSEEERKLVLSHLSTEQINYLVSQ KIEPKQFLPFIEIKDFELNNTLWYDVAYQTQKPSHTESDQEVKEYIVSFINRYRARMEYQ ELHDLLMNYTYNVLTRFFDEGDPNIENAHLIAKPNDPYLVLGSKNTLYTYEPKDLVSIND LPHASLVPQANDITIKKEVVKPLKELMAAAGEVNQKENGDMKVIAGYISYEDQMKLFEKA KLVYGEDVLQHWDYPGQSEFQLGYTVRLLPNGLTTEFDEKKESDKDKDAGKKEEAKSSDK KEKKNPSEEERDQEIWLKDNAYKFGFIIRYPKQKEDATGKRYQPYTLRYVGKEIAKKLHD EGYVLDEVNISDLKE >gi|312953956|gb|AENW01000058.1| GENE 19 18888 - 19868 1244 326 aa, chain + ## HITS:1 COG:BS_gerM KEGG:ns NR:ns ## COG: BS_gerM COG5401 # Protein_GI_number: 16079890 # Func_class: R General function prediction only # Function: Spore germination protein # Organism: Bacillus subtilis # 31 301 63 339 366 117 29.0 3e-26 MKKTFKKQMAVVFGAIAMIGYLSVRFFPAQEQSASPVISTKDETKHMQIYMMDSDKTLVP LSIPVSEEMSEEDKLALMFSYMSGKQEIKGFTPLFTKECTLQSSSIKNGIVSLYFDDSLK NYDKENELRILEAITWGATQFHDIEQVKLYLNDKQLTSMPNAQTPIPEILNRSIGINHFE TSTTTLHDSASLTVFYTKKVQGNEYMVPKSKRVAQSQGDALKASVENILSDISVSSALDQ PLYADDIKVSSFDVYDGSLIVNLNKNILASNRTVKQDVYNALVLSLAALPGIEKVEVRVD GVTVSPKDQKEDMVSVYALTYNEVQF >gi|312953956|gb|AENW01000058.1| GENE 20 19932 - 20423 468 163 aa, chain + ## HITS:1 COG:BS_ysnB KEGG:ns NR:ns ## COG: BS_ysnB COG0622 # Protein_GI_number: 16079887 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Bacillus subtilis # 1 149 3 154 171 101 33.0 5e-22 MKIVVVSDSHGRDDALEYVLQQHGDAYAYIHCGDIDADPGAFPRFVTVGGNNDIFYDYPD EQILSIGTHRIFIVHSHQFMYSRRSQQLADAAKERSCDIVCYGHTHIAADETVDGIRLIN PGSLWRSRDGRGPSYALLNIDGDTVDVQFEFLPQKQKKSKFFW >gi|312953956|gb|AENW01000058.1| GENE 21 20531 - 21721 1337 396 aa, chain + ## HITS:1 COG:no KEGG:Cphy_2845 NR:ns ## KEGG: Cphy_2845 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 1 396 1 396 396 657 79.0 0 MERKIGTVSRGVRCPIIREGDDLAAIVSQSVLSAAEAEGFELRDRDVIAVTESIVARAQG NYASVDAIAADVKEKLGGETIGVMFPILSRNRFAICLKGIAKGAKKVVLMLSYPSDEVGN ELVSIDKLDEAGINPYSDVLSLETYRKLFGENRHEFTGIDYVSYYGDLIRSCGAEVEIIF ANHPKEILKYTKNVLTCDIHTRARTKRILKANGAERVCGLDDIMTASVDGSGYNEAFGLL GSNKSTEDMVKLFPRNCQPLVQDIQKQVLQACGKHVEVMVYGDGAFKDPVGKIWELADPC VSPAYTPGLEGTPNELKLKYLADNDFAQLKGEELQKAIEAKIREKEDNLVGNMASQGTTP RRLTDLIGSLCDLTSGSGDKGTPIVLVQGYFDNFTN >gi|312953956|gb|AENW01000058.1| GENE 22 22237 - 22413 206 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFLSFQEFLTYFSKDITMLAHSGQLEGYLKQYVDFCSKHHIQPNLLELHREYANMHV >gi|312953956|gb|AENW01000058.1| GENE 23 22515 - 23252 598 245 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401516|ref|ZP_06645659.1| ## NR: gi|293401516|ref|ZP_06645659.1| hypothetical protein HMPREF0863_01799 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 245 2 246 246 177 42.0 7e-43 MESYVEVSMLHNTATILLSFLMASYACVQPLPIRKMLVYALALSIPGCLLFFPGSWLFLV LEEVVFFFWQFRFCAKSWMMMQGIRILWYMTSFAFYQGGFHNFLWFVPLHASVYWLWLVY GGMFLLLHVKWKDMLARMNYLYRLHIELADTTLHLKGWLDSGNLLSYEGIPVLFISSSYE TYFKKQDIELVVMNTVDDTSVIRCYACLAAIEGCHKHRVLVCCRNHVSLPLNCEVLLNMN MMTLG >gi|312953956|gb|AENW01000058.1| GENE 24 23258 - 23956 1015 232 aa, chain + ## HITS:1 COG:BH2556 KEGG:ns NR:ns ## COG: BH2556 COG1191 # Protein_GI_number: 15615119 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 19 225 23 230 237 237 62.0 1e-62 MKKLLQLIRFLFIKQDVMEVYYIQGNDVLPKPLDKEEELAALIALENGDEEARNTLIEHN LRLVVYIAKRYETNPIFMEDLISIGSIGLIKAVNTFKRDKNIKLVTYASRCIENEILMFL RKKSRRKVEVSFDEPLNIDYDGNELLLSDILGTDDDVVTKEFEKKENKRELLEAMSTLKE RERQILQMRYGIQHEELTQKDIAKRLGISQSYISRLEKRIIAKLKVQMKNSQ >gi|312953956|gb|AENW01000058.1| GENE 25 24191 - 24970 1120 259 aa, chain + ## HITS:1 COG:BH2554 KEGG:ns NR:ns ## COG: BH2554 COG1191 # Protein_GI_number: 15615117 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 1 259 1 261 261 275 55.0 8e-74 MSRYKVEISGINTAQLKVLTNAEMKELFVKLQQGDESAKETLINGNLKLVLSIVQRFSNR CENMDDLFQVGCIGLVKSIDNFDLKHEVRFSTYAVPMIMGEIKRYLRDNQVIRVSRHLKD LAYRAFKLKEEYVHKHQKEPSVSWLAQQLEVKEKDIVDALDSTQSVLSIFEPVYNSDGDE LFLLDQIKDDKDEIERLNNLMALKRSLTRLKGKELDIIQKRYYQDMTQTEIAGELGISQA QVSRLEKNAIAVLKKEFDS >gi|312953956|gb|AENW01000058.1| GENE 26 25016 - 25261 242 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293401522|ref|ZP_06645665.1| ## NR: gi|293401522|ref|ZP_06645665.1| hypothetical protein HMPREF0863_01805 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 79 1 79 80 112 64.0 8e-24 MKYTDICGRQVINVMDGSMIGLVNDVEFDPCTYVIHSIFVHPTQSFVKKLFPWFFPCDEI EIPTQEIENIAGDVILVKFRC >gi|312953956|gb|AENW01000058.1| GENE 27 25388 - 25789 529 133 aa, chain + ## HITS:1 COG:lin2136 KEGG:ns NR:ns ## COG: lin2136 COG1799 # Protein_GI_number: 16801202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 48 133 65 150 152 85 46.0 2e-17 MSISQKFKEFIAPMDEDDVLEVEQEEDTPSISEYERPKSKVNHLPTDTKMVLFEPRSFDE SEEIAKRLKENKAAVVNLHKLQRDYAQRTIDFLTGVIFALDGSIQKIGHNVILCTPRSVA VHGEISLDASEED >gi|312953956|gb|AENW01000058.1| GENE 28 25793 - 26545 226 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227431973|ref|ZP_03913993.1| ribosomal protein S4e [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] # 1 242 5 256 265 91 28 3e-17 MSVAIEHYRGNEEFVRRLQDQIDRMERWNRVVVTPFFSPDQIQIAERFCGHRILYRKDGG YAQAERCRLAFLPWEEEVQIPVLHLKAKISYSFGKLAHRDVLGALMNLGIERDKTGDLIV EQDAVHMFVDPDIGNYLIANLTQIKRCAVHLEPSEESVSYEPDIAYKSLIVSSLRLDTLV AALARLSRAKAADLIRSKQVKVDHVILEQTSYLCDNTCVISIRGHGRFQLKEVVKETKKG NLVIEVGMYQ >gi|312953956|gb|AENW01000058.1| GENE 29 26560 - 27024 679 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400859|ref|ZP_06645004.1| ## NR: gi|293400859|ref|ZP_06645004.1| putative cell-division initiation protein DivIVA [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 154 1 154 154 160 69.0 2e-38 MDRYAFDTMKNGYNRYQVEDYIQTQKLQMESLQKKLEKANLLKEELTREYQELETRYRDV SENLEVKEKAADEMTRMAMKEANMIVDTAHRNADAIVKESLMMARGILMEVARLGDEAND LKGSMRKELQKITQALDDFETPEIPDLDLLKKEI >gi|312953956|gb|AENW01000058.1| GENE 30 27267 - 29993 3449 908 aa, chain + ## HITS:1 COG:BS_ileS KEGG:ns NR:ns ## COG: BS_ileS COG0060 # Protein_GI_number: 16078607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Bacillus subtilis # 1 886 1 890 921 1029 55.0 0 MEYKDTLLMPKTRFEMRGKLPTKEPNFQKRWKESEIYEKMLENREGCEAFVLHDGPPYAN GDIHLGHALNKILKDVIIRNRYMAGYKVPYVPGWDTHGLPIETAIQKLGHNRKEMELSDF RKLCYDYALEQVDRQKKGFLSLGVVGDYDHPYITLTKDFEAHQIEIFASMAMDGLIYKGL KPVYWSPSSETALAEAEIEYKDIKSPTIFVKFAVKDGKGVLDSDTSFVIWTTTPWTIPAN LGICLNKDYTYALVESEKGKLIVLEELVDALWEKFGLETKKKLATYKGSELEMITCQHPL YDRESLVILGDHVTADAGTGCVHTAPGFGADDFFIGQKYGLPAYCNVDEHGCMMEDAGDW LKGQYVDDANKTVTQRLDAMGALLKLEFITHSYPHDWRTKKPIIFRATTQWFASIDKIRE KLLTEIANVDWIPKWGQQRMHNMIADRGDWCISRQRAWGVPIPIFYAEDDTPIMDEAVFA HVAELFREHGSNIWFEKDAKELLPQGYTHPGSPNGEFRKETDTMDVWFDSGSSHTGAMME RGLGYPADLYFEGSDQYRGWFNSSLIIGTAVHGHSPYKQVLSHGFVMDGKGVKMSKSQWN AVAPGEITKKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNTFRFMLANVNPE EDFTKEDLVDINELPELDKYILVLLNEVNEKAMKAYKEYRFADITNMLSNLMTNELSAYY MDYTKDILYIEKKDAPRRRQVQTVLWHAVNTLVRLWAPILVHTCEEVNDFFHTEAESIHL GSFAQALDVQGADTIKADMERMMAIRQDIFKALEEARAEKVIGKSLEAHVMINVSDEDRA LIEKLCGNHFNQWLIVSKVSFSVDELKQYEVCQVEVEKCEGKVCPRCWNITDSHAEDGLC DRCAEVLK >gi|312953956|gb|AENW01000058.1| GENE 31 30191 - 30922 174 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 103 239 102 240 255 71 35 3e-11 MEITSLTNAKVKQWAKLKEKKYREKDQRFLVEGEHLIEEAARAGLVEAVLVEIGKAHTFV EYPVYEVTKDILRKLESSVSGTWIMAVCRMPQYHDAEFGKRVIVLDDVQDPGNVGTIIRT AVSFGYDAVLLSAHSCDVYNEKVIRSTQGALFHIPVIRGDVQAMLMSLKQKGNRILATSL HNASALREIAVPDAFALVFGNEGKGVSEEVLRLADTHVFIEMHTFESLNVAVAAGICMYA FKK >gi|312953956|gb|AENW01000058.1| GENE 32 31307 - 31753 437 148 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400856|ref|ZP_06645001.1| ## NR: gi|293400856|ref|ZP_06645001.1| type II secretion pathway protein XcpT [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 129 4 130 150 78 41.0 1e-13 MNVKKLKKNKKGFTLVEIIVVLVIIGILMALAVPAVMKYINEAADTKVQSQVRAGYVAAQ SYATSQIGENPGISNDDLTTKVNNADAINGELGLSKTGEGDDAKYPEGAVKSITCTLTEK KIDKCEIQVEGSNDTYTATQTKIEKATK >gi|312953956|gb|AENW01000058.1| GENE 33 31826 - 32593 553 255 aa, chain + ## HITS:1 COG:slr1120 KEGG:ns NR:ns ## COG: slr1120 COG1989 # Protein_GI_number: 16329234 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Synechocystis # 1 252 1 264 269 130 35.0 2e-30 MDALLLLLYLYAFLIGICITSFLNVVIWRLPQGLSFVKGRSYCPSCHHKLQWYDLFPVFS YLFLKGKCRYCGNKISARETVLEFLGGCIGMFCFYTYGFSWDTVLVFAVFMILFTITMID FDTMTIPNGLIISLIVPVGIFTVLHPETALMTRAIGFFIVSLPMYLLTLLIPDCFGGGDI KLIAVAGFLLGWKLTLLAFFISVLIGGSYAVYLLLSRKTQKGAHIAFGPYLCAGIMISLL YGETLIQGYLSLFGL >gi|312953956|gb|AENW01000058.1| GENE 34 32618 - 33814 1276 398 aa, chain + ## HITS:1 COG:DR1863 KEGG:ns NR:ns ## COG: DR1863 COG1459 # Protein_GI_number: 15806863 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Deinococcus radiodurans # 1 390 1 400 406 189 28.0 7e-48 MAVYKYTAKDINAKRITGKMEVNSRSELAAFLRSRDQYLIDCKDVTNTQQNTYKLTLKEL SDFSRQLGAMIGSGVSLIRAMSILVQRESKPKIKSIYTDMYRKLQQGQTLSMAMESEGKA FPELMINMYRTGESSGQMEKVAMTMALQYEKDDHIKRKIRNAMIYPIILLCVTVFVIIVV FTWIIPSFSSVFEGMELPLITKIVNGLSQIMIHYWYWLLIGILCIFAFITTLLRIEKVRY RFDKLKLNVPKIGKLLCIIYTARFARNMCSLYTSGISIINGMQIIRNTIGNKYIESQFDG VVNMVRNGTSLSQSIQKIDGFDPKLASSIYIGEESGRLETMLTSLADDFDYESEAASQRM VPLLEPVMIIILALIVLCVMLAVLLPIYQMYQNPTSLK >gi|312953956|gb|AENW01000058.1| GENE 35 33827 - 34738 823 303 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400853|ref|ZP_06644998.1| ## NR: gi|293400853|ref|ZP_06644998.1| hypothetical protein HMPREF0863_01138 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 303 1 303 303 409 69.0 1e-112 MAKEYVLFISSHAVQMIYGSCDKKDMIKVEAFHEYPLEEGAMINGVITDDSSILDILKEL QENGLKEARLVIDSGQILVKNIRVPQLSRKELLKVAKDELADIDGSYEDLIYDYSVLQSS FEEEEKKGGEILCCAVERKLLTSYIELFDATGIRLKSVDISINALHKLTQELADLNGKTY IVSVLDGNNVSSYLFEKNHYTFSNRTRLFSERGTQAFISEMNSNISQLIQFSKSKQSPYP IERAYFCGLDDAEELMVFESIRSNLNLQAEQFPDSKIVYVTGDHYKDFHLHDYVFPVGCL IRK >gi|312953956|gb|AENW01000058.1| GENE 36 34749 - 35486 668 245 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400852|ref|ZP_06644997.1| ## NR: gi|293400852|ref|ZP_06644997.1| hypothetical protein HMPREF0863_01137 [Erysipelotrichaceae bacterium 5_2_54FAA] # 6 245 5 242 242 162 45.0 2e-38 MFQNGLKNKDIDLLKVYKQKKEASPYVGTLKYLVFPISAAVILISWFGIVTYQNHALDSD IAAAKAELKQVQKQIAEDPNLEKYQSLQKAMNDVEKYKTLHKDIQSYPQLSQNTFDQILI ASDVNTSIVSLSYQRETQVVTLQVESLTAEDTEQFVRRLKKSKTFETVDYAGYAQTEKTT KTAEANEKAAENVKDNTEKNTDTKTDTESAAQQLLDLLNKTNETNTQADKQTTTVYSATV LCKLK >gi|312953956|gb|AENW01000058.1| GENE 37 35524 - 36081 573 185 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400851|ref|ZP_06644996.1| ## NR: gi|293400851|ref|ZP_06644996.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 13 185 24 207 208 138 45.0 1e-31 MLYVLLCIVVFAGGLFWMLLPALEKHNTLKAEYDTAQLELQSVKASMIDYGDLDKQLKET SEELKNIKNKFYEEMNKEDVDNLITSMTIEHGLTPVSLSIAEADQEDILSYTEYQLQQKK GSSSKNKDGKLKVYNVNLSVSGAITDVQTLVDDVRTTKSLKVSGITYSEEDDEKTTTITF KLFMI >gi|312953956|gb|AENW01000058.1| GENE 38 36100 - 37143 735 347 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400850|ref|ZP_06644995.1| ## NR: gi|293400850|ref|ZP_06644995.1| hypothetical protein HMPREF0863_01135 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 300 1 292 336 159 36.0 2e-37 MRRNQKGSALLWAITVIMVLMITVAAALGISYSYYNRSVNNNSKRQAYLTAKGVIQNIVE KIELDNSDYIAMIPEEENQSTPLNIDIPEASNIGKVTEAKISRVAVDKDKDIRGKITISV TVDYAEQTETVNADMQLGRTGDLKKWQLLKYYKGQGAEVQENINIKNAKIMMSHLTPLYE AACTGNKVMQEYVKSDAEIYERMIAEYGETWEKYANNGYYSNDRMREYLYTGVYNSSIPK FDNSAASNFPEKFEGKTFYMKTYCSDGKKLSFVYANEKSTMNNGDWEASMIFNVEDGHWY DVTELNGNKIIPLKILGELVDGKEPENELLKWEAFKKKYFIPERCVD >gi|312953956|gb|AENW01000058.1| GENE 39 37161 - 38090 467 309 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400849|ref|ZP_06644994.1| ## NR: gi|293400849|ref|ZP_06644994.1| putative SPFH domain/Band 7 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 309 1 321 322 78 26.0 6e-13 MNKRGMTLIEMIAALAILSIASLTLFGGFSAVLKIMGNSSTMKNNSDMLLSYAEETMNND VRDNIQIDTDKVTYTISSDRVSVPVARNIAILNVKDDDRVHLKALEEPGNQEKVRDTSVY KEFKSNLDEFYKSIKKAREAHEEMENGDSYNASLKNVHILMSSNWIQFPKELLPVSYRSK LGAQDVYVFPYYPWEIKKGDLQHDHGGLIIMLNPRNELVDTDIDFDDYLYMIYDYDNERW YYCDQDTYRIKVVFSSSDGKVLYDVKNNGYIKSWTDMKDIVKNPKNGWKVLDIDAEYNTN TDSMWKNVS >gi|312953956|gb|AENW01000058.1| GENE 40 38112 - 39602 405 496 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400848|ref|ZP_06644993.1| ## NR: gi|293400848|ref|ZP_06644993.1| putative prepilin-type N- cleavage/methylation domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 442 6 437 489 211 34.0 8e-53 MHLNKKGMTLIEVIVVLLLSSILMVIAGGLLLNSMGYFNRTAQSNYEKQAVDAISSYVRG QLVYASEVQIATQKPDKSDDWHWISVNDDNRLMKDDTQVYNADFYRGRNLKITAKCYSDN YRLDLSFAFTDNEKQVYKTASTLELVNIKAKDKKGEAIANAGIKGKQVDISDHDQAEAGY KIYYKINGALKIVDDPDYQYPDIDYDDPAFEGTVYDELMCRDASITKPNEAGNNKGTWLA NHDYKKGEFVDYLGVTYRAVKDVRNGNDPLTNHGNAWKPVNPPYWVKGASYEAGDVVIYQ ITNTYYQATVQIHNSVESPDNDKQKWHRLNTAELNEIIEEHKSKDFCDIDNKDEGDWTVG GEKARCDAPEKQWNVGQVIEPGDYVEDPMNPGQWYRYVYSSPLQPNAQEDNAWAPGGVAR NYWKKIDEAWNTNGTYFKGDIVSYTVNGKKLFYQALQRIDGVWNPSTINAGWSKGFESIE ELLGNTNISVTCQTYS >gi|312953956|gb|AENW01000058.1| GENE 41 39626 - 41299 2070 557 aa, chain + ## HITS:1 COG:DR1964 KEGG:ns NR:ns ## COG: DR1964 COG2804 # Protein_GI_number: 15806962 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Deinococcus radiodurans # 5 554 294 845 846 372 36.0 1e-102 MKNIPIGEVLKDYGYINEEQLQRALAEQKKDRSKRLGQHLIDLGFISENQMLKALSDKLN EPMVDLNEEKIEVDAVAKIPKALAQKYNLIAISENNGRLTVVTSDPLNFYGIEDVRLVTG MNISVCLCEKAAIDRAIDYYYAEIKAREAANVANENVVSFEFDDTELYNSEEDDTPVVKL FNSLLTRGYNANASDIHIEPFEDKTMVRMRIDGMIVDYVQLAKNLHQSLIVRIKIVSNMD IAEKRVPQDGHFLTTIERIRMNLRVSVIPTVYGEKAVLRFLNSNTPILNEKQYGMNTDNY AKMCRMMEMPHGIIYITGPTGSGKTTTLYMILETLAKRQVNIATIEDPVEKNIERVNQMQ INTMAGLTFERGLRALLRQDPDIILVGETRDAETASISVRAAITGHLVLSSLHTNDAISS IVRLEDMGIEPYLIANSLVGSVSQRLVRTICPHCREKLKATQLERQVLGKEIEYVYRGAG CHHCNQTGYKGRTAVHEIILIDKEMRRMISSHRDIDDIYAYVKKSQQLHTLKDEAVELVI NGQTTMDELYKITAYSD >gi|312953956|gb|AENW01000058.1| GENE 42 41311 - 42366 1244 351 aa, chain + ## HITS:1 COG:NMB0052 KEGG:ns NR:ns ## COG: NMB0052 COG2805 # Protein_GI_number: 15675990 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Neisseria meningitidis MC58 # 8 346 6 345 347 309 47.0 6e-84 MNDLLEGMIAYAREHNCSDIHLNVGGPAMIRANGVLREYPAFIKDTQTTEMILSMVDERL MEDFKQGKDLDFTYVSKGENRQRVNVYRQQDKLCAAIRIINNTILTLDELLMPDILKQLA MEPRGLVLVTGPTGSGKSTTLAAVMDYINERRNCHILTIEDPVEYVYQRKQALIHQREIG RDGDSFDTALRSAMREDPDVILVGEMRDYETIAAVVTLAETGHLVFSTLHTIGAAKTIDR IIDVFPPHRQEQIRMQVSGILKAVITQQLLPKRDGSGRIAALEVMIGTDAISSMIRENKV HQINSIIQTGMREGMQSLNFALARLVRNGMVTREVAEKYSDDPQELKQYLQ >gi|312953956|gb|AENW01000058.1| GENE 43 42681 - 43721 1321 346 aa, chain + ## HITS:1 COG:BS_pheS KEGG:ns NR:ns ## COG: BS_pheS COG0016 # Protein_GI_number: 16079916 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Bacillus subtilis # 2 344 3 343 344 451 62.0 1e-127 MEKLTSIKEEGLSQIEACEDLAQLQQLRVLYLGKKGPIQEVMKSMKDLPKEERPAFGQLV NEVKTLFANAIEERRAVLEVAEMEKRIAEEKIDITLSGQKPNLGNAHPLMIVQQEMEDLF IGLGYTVEEGPEVEMDLYNFERANIPKDHPARDMQDTFYINAEELLRTHTTAIQTRQLEK FAQEGKELIKVICPGKVYRRDDDDATHSHQFMQCEGLVVGEHITLSDLKGTLQFLAQKMF GEERVIRFRPSYFQFTEPSVEVDVSCHVCGGKGCPVCKGTGWIEILGAGMVHPNVLSMAG YDAEKLSGFAFGIGIERVAMLKYGITDIRNFYTNDIRFLKTFNRFE >gi|312953956|gb|AENW01000058.1| GENE 44 43734 - 46136 2854 800 aa, chain + ## HITS:1 COG:SA0986_2 KEGG:ns NR:ns ## COG: SA0986_2 COG0072 # Protein_GI_number: 15926723 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Staphylococcus aureus N315 # 158 790 1 634 642 428 38.0 1e-119 MKISKKWLSQYMDLSDMSIEEIADKITSAGLEVEGIEKMSQGSNLVIGKVISCEDHPDSD HLHVCQVDLGDKIEQIVCGAPNVTAGQKVIVARVGAKLLGGDIKAGVIRGQESNGMICSL LELGVDPHQLSEESKNGIEVLDEDAPVGNENPLGYLALDDEILDVGLTPNRNDCMAAWSM ALETGAILHKEVNIPYVEGASNVGEASRLIVRSETEKCPLFLGKVINSVTIKPSPKWMQE LLMAAGMKSINNVVDISNIVMLETGQPLHFYDLDAIPAQEITVKDQQRFDYTALDGESYH IEEDDIVITTEGKPIGIAGIMGGDDSKIEETTKGIIIEAAIFHHVSIRNTSRRLNLGTDA SVRYQKGIEPMATFKAVDRAVQLLIEYADASGLEETKQYGSNGYTPLEFDVNLDRINVLL GTDFQQEEVMKVLDDLHLEPSVNNSDIHVKIPSYRMDLAIEADIAEEIIRILGYERLPST MPKMPSTVGALNRRQQLRRKYRNMLSDLGYNEAVTYSLVGKKEIEDAVMPHKDIVELAAP MSEDHKYVRDSILPSLLECVAYNQARSIKDIALFEISNVYGLGHVEERLAVAASGALQEN RWQKFRMEVDFYTVKGLVEALLESIGYQGSRVVFKENHTDIVHFHPYRSAEVYLGRELLG LVGQIHPKMAQAYDITETLALEINLEVLLKNKPGKVKFTEVSKYPSISRDLAFVVKEDVK VADIISSIKKNGKLEKENIIQNVEVFDVYTGEHVEKGSKSIALSIVFQSAQRTLKDADIN EIHNRILETLEKDLHAQLRA >gi|312953956|gb|AENW01000058.1| GENE 45 46505 - 47380 924 291 aa, chain - ## HITS:1 COG:BS_ykuE KEGG:ns NR:ns ## COG: BS_ykuE COG1408 # Protein_GI_number: 16078469 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 25 285 30 284 287 122 30.0 8e-28 MVKKLLKIVSVLILLALIVAGVFFYSIYISVDRVNLSYQTISSSKIPEDMNDLKIAFISD IKYNEYMNKERLTSMISKLNTTGADVVIFGGDMFSNPQTKAPDSQMSKDLTTILKSIDAP LGKFAVLGDEDLANDKTKKIVSQILYDSDFEILSDTSIRLRNKGDSSISLIGLNNMLNGD PQPDRAMKKVSEDEFNILVTHCPDIVKTSGINTKYLNLIIAGHSLGGQIYLPLLGPLHTM EGAATYNHGSYDINGTSLYVSNGLGTKDIDMRLLAPPQILVFRLQHESGKK >gi|312953956|gb|AENW01000058.1| GENE 46 47459 - 49297 1943 612 aa, chain - ## HITS:1 COG:BH2662 KEGG:ns NR:ns ## COG: BH2662 COG0595 # Protein_GI_number: 15615225 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Bacillus halodurans # 34 580 9 553 555 584 51.0 1e-166 MNNNHRNNRNTAPRNNQENTKNSYNKINTERGDTLIYAMGGLGEVGKNMYCFEHENEILI IDSGVRFPEENLLGVDYVIPDYNYLVKNNRKRKVLIITHGHEDHIGGIPFLLKSVDIEAI YAPAFAVALINKKLEERRMLRSVKIIEINDRSSVKMQHFTCGFFNTTHSIPDSLGILINT PNGRIVHTGDFKFDLTPVGTNSDYQVMAYMGQIGVDLLLSDSTNSGVEDFSISEKKVAAE ILDTMKKTSGRLIVATFASNVYRVSQILEAAVACGRKVIIFGRSMENVVTIGRKMGKIKV GEQHFLSPDQLGRTPANKTCIVCTGSQGEPLAALSRIANGTHRYIKLIPGDTVVFSSSPI PGNGASVNQVVNKLFRAGANVLTKSILSNLHTTGHASQEEQKLMLQLIKPKYFMPIHGEY KMLVQHKETGKETGLADDHIFTCANGDVLILRNHQVFESSWRIQADDIYVDGNDISGVST AVLKDRTILADNGLVAAIIAIDSKENKVLCKPVIVSRGFVFIKDSQGLLREAEQIVYAAL NEKMKERTTFSELKNCVRSTLEPFLYNKTHRNPIVIPVIINSKTAMAAMAQARAARATKR PAKKKEPQNAQS >gi|312953956|gb|AENW01000058.1| GENE 47 49467 - 50021 647 184 aa, chain - ## HITS:1 COG:BS_ykrB KEGG:ns NR:ns ## COG: BS_ykrB COG0242 # Protein_GI_number: 16078520 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Bacillus subtilis # 3 184 2 183 184 160 46.0 1e-39 MSLNYDDIVKDTDAIVRTKSEPVTLPLGAEDEALLQDMLTYVRSSQDAEIAEKENLRPAV GIAAIQLGVPKRMLAVVVPNEEGIDEYALVNPRIVSESVQRAYLKNGEGCLSVENEHEGI VPRAARITVRGYDLLQKQEITIKAKNYLAIVLQHEIDHFSGTLFYDRINKQDPWREDPTA IVIE >gi|312953956|gb|AENW01000058.1| GENE 48 50161 - 51393 1671 410 aa, chain + ## HITS:1 COG:BS_ylaO KEGG:ns NR:ns ## COG: BS_ylaO COG0772 # Protein_GI_number: 16078549 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus subtilis # 11 384 4 367 403 155 34.0 1e-37 MRIKNVVLTLKMPKKFDFLMQFAVLILILFGTLMIVSTNVGNTTKDPYIIPKVLAKQLFF IIVSYVLMTFFANNFTMKRAQKLFPVFGIGIIIALFSTQLFEGVLGSKAWIRIPIPGLGE MTIQPSEFAKVYMVVVMAVFVELTARRRKFKFWTIVRIPVYFFMVIVAAILLQKDLGTLF VLVLLCAICFLIPSHISLRKQQRWVRLGLIIGCISIVFIMSEPVIDFLNGIGPLQHVAVR IENALNPFTDPHNNGYQLINGLYGFARSGFTGVGLGNSIQKYGYLTQSDNDFILSIIVEE LGIFGLMVVVLGYVVILQRLFYYAFHTKSEGYKVILVGTAMYIFIHFALNVGGVSGLIPL TGVPLLFISSGGSSLMSIMTAIGISQSVISRIRRQGSVAVSAAAKQLPHT >gi|312953956|gb|AENW01000058.1| GENE 49 51450 - 52091 371 213 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 23 208 8 193 199 147 38 4e-34 MGGNSRFTGCTIILPLCICFIHEELKKMRIVAGEFRSRVISAVEGNTTRPTTDKIKEAVF SRIGPYFDGGNMLDLFGGSGNMSLEAISRGMEHALVCDVSHAAVSTIHKNVKTLDVASRV TIWKMDYRQVLAKASQEQRTFDLVYLDPPYKKQQILHILQYLDTHDLVNELGDIVCESLK EDEFPDQVGALHKVKDVTYGITRITYYRKECME >gi|312953956|gb|AENW01000058.1| GENE 50 52088 - 52558 381 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 156 4 158 164 151 47 3e-35 MKAAIFPGSFDPVTLGHLDIIERASRLFDRLIVVILENSEKHATFSMEERLTFLRSNTAH LSNVEVAADHGLTVDFARKQEAVAIVRGVRSVKDYEYELDIASVNQHIAPEVETVLLYAS PEFSYVSSSIIRELVKYGQDISAYVPKDVMEAFVNR >gi|312953956|gb|AENW01000058.1| GENE 51 52960 - 54618 928 552 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYDPITSYVKQHITVTKSSQAANAILLLAAVCTAMSTFFVVTSFSWFLATLQYIAAEQRT SYLSTLFMYGCCTLAALISIVVMIQYYLLQWHTHAALIQRSLYWGILFLTMIPGYMILMY VASSADLMDICMLVLLACIPCYACMRCFLMNRIKKESYHPANLLQKTFLRALGIFVLCML LLQLLLPERLQPLLYMVLLAVPAFTLTGLGCRFLTAYRLFYRRREEFVEFEQMVYDEDAF TDDADIKERLTIRNTAATMTAADILEEFGFDRKEVLDAILANRSIATFSAGRHQDPTLLH ILLQRLKFEAVPFQVERFRRGSWEPYSQEDYAGIPPADIHRRAIVYESAAQRRRLSDFSI LGLILCMLFPANLYRPINWMSKNSMVITYHAFTFLNIQTLLHMLFITASSIFVLCSSSLQ TAVAQLMQQSISTLWLISALFFFIELFHFPVYMRKLEAAIQEAEHKTHNYFVAAFLLYLI STLIKMIRRGFLTALCQLLILILSVEAARVILLCYRFIKYRRLTQSQILEQYEYYLPDTV EEDAQAVPGTSQ >gi|312953956|gb|AENW01000058.1| GENE 52 54943 - 55818 837 291 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400825|ref|ZP_06644970.1| ## NR: gi|293400825|ref|ZP_06644970.1| hypothetical protein HMPREF0863_01110 [Erysipelotrichaceae bacterium 5_2_54FAA] # 3 285 2 284 293 311 57.0 3e-83 MSSMHFQPPSQDAVKNKFITSMSMLLIVVSLYVTCYMLFFRTVEVDVTKDAGIEYRGEDG SASVRVINRNQNYNQRIQEFMDSITYEVKPAKKLKNGDELTITARYDETLASRYHVNPIQ TVRRVKVKDLPERFADVNEIPASFLSTLDDRTRSYLNKNMEQILNEDFTSFFIRSQPELV NQKQMYRVFLDGKKSSAKDKIIDIYAITAKGEVNTSSKKETLEMKEDTIYYMITYNEINT SLRILDENVYGEKLIISESNDLTKETQFTSFMKSKYKSAYEVQIMKSEANS >gi|312953956|gb|AENW01000058.1| GENE 53 55921 - 56313 509 130 aa, chain - ## HITS:1 COG:L60959 KEGG:ns NR:ns ## COG: L60959 COG0537 # Protein_GI_number: 15673980 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Lactococcus lactis # 2 118 4 120 133 131 52.0 2e-31 MCIFCSIVKGEIPATRIYEDDTVLAILDISQVTKGHTLVIPKQHTENFMSCEPELMKHVM EVAQMLAKRIMERTHAEGMNVLSNIHEVAGQSVMHFHVHLIPRYSEQDACVIRFDKSDPQ DLDAIGTLLK >gi|312953956|gb|AENW01000058.1| GENE 54 56382 - 57260 1132 292 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293400823|ref|ZP_06644968.1| ## NR: gi|293400823|ref|ZP_06644968.1| hypothetical protein HMPREF0863_01108 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 291 1 293 294 221 47.0 3e-56 MKKLCTLLAAMMLFTLAGCKDATAGISNGSEALITIEGNKITNEDIYGLIKTSAGANETL SLIKTQIYKKENIKVSDAMKKEAEESVKSLKSMYGDSLQDTLKQYGFDNLEQYKEKSIYP GLQQKELNKKYVKAKEKAMFDSYYPVKAQILEADSKKKAENALKALKDGKDFKAVVKEYG STTTYKGTEEIYNSKSGLPTTVFDKIKSTNKKGLIESVMEDTSSKKYYVVKVTNATPKDF EEDAINSIVEKASTDIEPAATAYYLKKYDFTVYDKDIYDGIKSTNESYIVQD >gi|312953956|gb|AENW01000058.1| GENE 55 57274 - 58272 1223 332 aa, chain - ## HITS:1 COG:RSc1715 KEGG:ns NR:ns ## COG: RSc1715 COG0760 # Protein_GI_number: 17546434 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 165 319 266 435 648 65 34.0 1e-10 MIKILKKQWFVVLIALIFIGFAIFSVYDTNKGKLPGKSVDGKDVVAGLKGDVNITADELY KNLSKTYGKSMLFMKFQAEVINSSIKTTDELKKTAEEYESNIKQSAESQAASSGTDAEAL ISQNIAQYGFTSDQLYDYCMTVAKMEKMQNDYISKHLDELFTPIYKEKKSRTVSHILIKM EDANKPTKKELEKVQKVEDALKKGDSFADVAKKYSDDGSASDGGYLGYMDSDTSYVDSFK NAAFKLKAKETSDWVKESNDSYNGWHLIKVEETDKAKLEKDKKAKDSLYKAIANGTENLS NTYLWEAAKKLDIKYANDDVKKQIMDILDVKE >gi|312953956|gb|AENW01000058.1| GENE 56 58553 - 59368 965 271 aa, chain + ## HITS:1 COG:BS_yurY KEGG:ns NR:ns ## COG: BS_yurY COG0396 # Protein_GI_number: 16080323 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Bacillus subtilis # 2 250 4 253 261 301 59.0 1e-81 MSCLRIKDLHVSVDGKEILKGLSLDIHSGETHALMGPNGNGKSTLLAAIMGNPKFQVTGG SITLDDQDVLAMEVDERSKAGLFLGMQYPSEVSGVTNSDFLRAAINARRERPIPLFSFIR EMEKTIRDLQMKEDLAHRFLNEGFSGGEKKRNEIVQMKLLKPSIAMLDEIDSGLDVDALK IVAEAVAAMQREQNMGLVIVSHYARFYELLKPTHAHVLVDGRIVVSGGSELVEKIDQQGY DWIEQEYDVQVVREEEKKVELLGSCGASRGA >gi|312953956|gb|AENW01000058.1| GENE 57 59370 - 60158 919 262 aa, chain + ## HITS:1 COG:BH3470 KEGG:ns NR:ns ## COG: BH3470 COG0719 # Protein_GI_number: 15616032 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Bacillus halodurans # 47 258 219 434 435 107 31.0 3e-23 MEYSVHSGFETLALSPRNTEKLKLVVDERINASLLVTYSGTWESLQVEVIASPYSSLTLM LKNDGSEDVVLQVSGSVHRDASLTLALCELNAGNTQARVTLDLCEEGAFAMLRSACIAAS RKQFHMQCNHLQAHTEGLMENYAVVEEGGQYRMEATGKIIKGARESNSHQKTRVLTMSER HSSEVVPVLLIDENDVKASHATTLGQPDENQLYYLQTRGLSRRQALGLLTVGYIMPITEL FDQEEVRTALKDEIEMKVGLHA >gi|312953956|gb|AENW01000058.1| GENE 58 60151 - 61383 1519 410 aa, chain + ## HITS:1 COG:lin2508 KEGG:ns NR:ns ## COG: lin2508 COG0520 # Protein_GI_number: 16801570 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Listeria innocua # 1 395 1 397 408 365 45.0 1e-101 MLDNANIRKDFPMLQKTMQSHPLVYLDSGATTLKPRQVIDAVVNYYENYGANAHRGDYDL SYFVDQEYEQTRKDVAAFLHAADAREIVYTSGASSALNLVAYGYGRKFLQRGDIILTSVA EHASCVLPWMRVAQECGAVVQYVPLDAQGRITLEAVASMMNERVRVVALAHISNVLGYLA PMREICELAHRYGAVVVVDGAQSVPHIPLDVVAMDCDFLAFSAHKMCGPTGIGILYGKLE LLDAMDPLYLGGDSNARFDMCGNIQLKNAPYKFESGTQPIEGIFGLHAALQYIQSIGRKN IHAWEMELHDYAIRELRRLDNIEVYNPDADTGIITFNVKNVFAQDAATFFNANGIAVRSG QHCAKLLNNMLDTSATIRASFYLYTSYADVDRFLDVCRRATMEACLDVFF >gi|312953956|gb|AENW01000058.1| GENE 59 61396 - 61845 725 149 aa, chain + ## HITS:1 COG:UU453 KEGG:ns NR:ns ## COG: UU453 COG0822 # Protein_GI_number: 13358016 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Ureaplasma urealyticum # 5 149 6 152 155 96 38.0 1e-20 MSDLMKDPMILRSIIMDHYEYPRNHELTKEDGYVQKHMASESCIDDIYVQSRIRDGVVED VRFDGVACTISTASTSIMSELLKGKRVEEAKDIIANYFHMIDQRDYDEEKLEEAVAFHNV GSQANRIKCATIGWKAMEEMIEESEERHE >gi|312953956|gb|AENW01000058.1| GENE 60 61838 - 63238 1730 466 aa, chain + ## HITS:1 COG:BH3467 KEGG:ns NR:ns ## COG: BH3467 COG0719 # Protein_GI_number: 15616029 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Bacillus halodurans # 5 466 4 465 465 630 64.0 1e-180 MSETRIPVNEEYKYGFHDEDVSIYNTGKGLTRDTILAISHKKKEPQWMLDFRLRAFEQFE SMDIQTWGPDVTNLDFDDYTYYIKPSDKTEKSWEDVPDTIKDTFDKLGIPEAEKEFLAGV TTQYDSEAVYHNMLEEVESKGVIFLDTDTALKQHPDLFQKYFGRLVPYTDNKFAALNSCV WSGGSFIYVPKGVKLEKPLQSYFRINTERMGQFERTLIIVDEGADVHYVEGCTAPTYSKD SLHAAVVEIFVHKNARCRYSTVQNWSDNIINLVTKRAKVFENGSMEWIDGNIGSQTNMKY PACILAEPYAKGTCISIAVAGKHQIQDAGAKMIHLADHTYSNIVSKSVSRNGGEVNYRGL VLHGPNAAFAKSKVECDTLILDKQSRSDTIPTNISKNMTSQIEHEATVSNISEEQLFYLM SRGLSRSAATEMIVMGFLEPFTRELPMEYAVELNQLLKLDMSDSIG >gi|312953956|gb|AENW01000058.1| GENE 61 63231 - 63749 452 172 aa, chain + ## HITS:1 COG:aq_1731 KEGG:ns NR:ns ## COG: aq_1731 COG0212 # Protein_GI_number: 15606807 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Aquifex aeolicus # 3 170 5 180 186 84 33.0 1e-16 MDDVRARALKRRNALSREERIQYSRRICERVQPLLHGIVALYRAVGSEVDLSYLNKSGLH LCLPACSNADMRFYHIDESTEYRKSRFGIWEPVHALPAEASQLDIVLVPLVAFDEACNRM GHGCGYYDRYLPVCRATTIGIAFECQKDILQLHAHDVPLDMIVSEQQMYRRT >gi|312953956|gb|AENW01000058.1| GENE 62 63978 - 64721 682 247 aa, chain + ## HITS:1 COG:no KEGG:CTC00594 NR:ns ## KEGG: CTC00594 # Name: not_defined # Def: platelet activating factor acetylhydrolase-like protein # Organism: C.tetani # Pathway: not_defined # 54 243 82 284 291 100 27.0 6e-20 MKYKTPVSLVLAASALLMLGAVLPSVAADGQSTQVKKGHAVMEKLAKQSVASVDKKIAAQ EQKERLQKLSSQPLSLRFQNALIMGDSLAEAFGDYQLVSSSNLLATRGRRTDNIDQEIAT AISLAPRTIFLSYGMNDLEYCRGNAQRFIRQYKKQIHKLKEALPDTKIFINSLIPMDAAA IAQIPVYARYKEFNEALKQMCEEEQITYIDNTALMDWSPAVYEIDGVHPKYSYYPIWLAH MANEAGI >gi|312953956|gb|AENW01000058.1| GENE 63 64748 - 65176 486 142 aa, chain + ## HITS:1 COG:no KEGG:NT01CX_1335 NR:ns ## KEGG: NT01CX_1335 # Name: not_defined # Def: putative lipoprotein # Organism: C.novyi # Pathway: not_defined # 32 142 51 161 162 61 27.0 9e-09 MLLAAFAFALPFARGSREINLDTLKKPLAPYVTDMEKKDAAWVRKQYHLDSAAYEQALVY GAASAMEVNEIAVFKQADKTKREALQKLCQERTDRQLKSFQGYAPRQSALLEKAAVYEDG RYVVVLIHPQQSRLRQLLKKAW >gi|312953956|gb|AENW01000058.1| GENE 64 65184 - 66566 1090 460 aa, chain + ## HITS:1 COG:CAC1564 KEGG:ns NR:ns ## COG: CAC1564 COG1696 # Protein_GI_number: 15894842 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Clostridium acetobutylicum # 1 460 1 473 473 262 36.0 1e-69 MTFPSLIFLFLFLPCALGLYIVVKPKVRKVLLLLFSLFFYAWGGIGNACLLLLFVCMVYA LGRYIGAVEKKRRARRLTESILLLVVLLFYYKYYGFFLDTLFAVLSVPISYEVLPMPPGI SFITFTAMAYLIDIRREVIRPASFLQVAVYLTFFPKLIMGPIERYDVWAGQLKNTWQPAM LEEGAIRFLMGLSQKLLLADALAPLWSYTSTHSVSMASAWLGLLAYTFQIYFDFQGYMNM AIGLGRMFGIRLQENFDHPYTSTSITDFWRRWHRTLGSWFRDYVYIPLGGNRKGLWRTLR NLMLVWGLTGFWHGASWTFLLWGLYYGILLILEKFVLHPYLKRLPSAARMMLTFAMVMLG WVLFASDGLSQAVVYYRQLFTTTHGVVDRQTLSLLVNYGFWLCAAAVFSTRAPLVVSSNL MYALREQQWFLKPVLTIVVLVILLSCLMSAGYQSFLYVQF >gi|312953956|gb|AENW01000058.1| GENE 65 66579 - 67721 1127 380 aa, chain + ## HITS:1 COG:no KEGG:BBR47_29640 NR:ns ## KEGG: BBR47_29640 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 32 376 32 378 378 227 34.0 5e-58 MKIRNALRSYGVISTMLLCMIGFILLHLGHRDLAFSEKENRVLQQRPAADMAAVFHGSFQ KESEAWLRDQFDQRFALVQLHANLNYILGKRELQDVIIGQDGILFQKQEKPNQERLQTKA GQLRSFAKRHGDKKLSMLLIPNKSAIWKEKLPMYEQGEDQLETLKDFHKKLPAAITWIDA AAPLWQHRGEVLYYASDHHWTTRGAAVAFDAWCAAEKKKRKTDYEVYTVNDQFYGTLANA SGYYRGKKDHVDIYVPEKSQELVVTYVQEQRRTATVFERDKAASANPYDVFFGGNHGLMQ LDTAQSGKRLLVIKDSYANCFLPFLIPYYKSITVVDPRYYYDDLDKLIEEQGIQEILFLY NANTFFSDDSLNEILKKEVK >gi|312953956|gb|AENW01000058.1| GENE 66 67780 - 69183 1458 467 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400815|ref|ZP_06644960.1| ## NR: gi|293400815|ref|ZP_06644960.1| GntR family transcriptional regulator [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 455 1 460 479 186 30.0 2e-45 MEQEATLYRQISRQLLQDIYKGTYPYGTKLPSLQALCEQFGVGRNTIRAALALLEKDGAL QREKGSCARVSLDIHHLEKNRYFLYRMACSRDGVAHVYDALGMLMPTAIHAALQHADAQH LEELQFGIRQLTQKEHTLYELNEALQQLYLKVLGFLGNAYLLDLTKQLLDFLYLPYAKKE NSEEALADNKVKLSETLAKILLFVMQNNPFMMKKTIRYFCETTKKDSMRYLERICKGIHP QEGIEFEWYTGREVSFLYMKTAGSIVKDIAENRYPDGHLLNLEQLSERYAVSLRTIRRTI KFLNDLQLVETRNGLGSRIVYSSQQKISSQQQEQLHPLLDYYICMLELTELLAKATLSVC MERCTWKELEGLAKEIQEKKRLSPESVLFIIKHHENPCICNIAEQLEEAVSGSMLIRTLF GHEADEQTQQDMKSLCQTLRNRERRRAIQLMQSLLHNETGSWKMKRC >gi|312953956|gb|AENW01000058.1| GENE 67 69740 - 70366 401 208 aa, chain + ## HITS:1 COG:no KEGG:CTC00594 NR:ns ## KEGG: CTC00594 # Name: not_defined # Def: platelet activating factor acetylhydrolase-like protein # Organism: C.tetani # Pathway: not_defined # 33 196 117 282 291 89 28.0 9e-17 MMTKSDADGQNTSRYRISKKKQTQPIYEMVPCYEEAVILGDSLAESILDFRLLRKHNVVA KRNRCIDSIQGDLLFAISMQPSVIFMEYGKNDMLRSGKDLNAFIACYRRQIQMLQSALPQ TAVYINSILPLRRDVMQRNGGEHRYHSYNRALKDMCDALQLTFIDNSSLMEWEDEVYEYD GIHPKYPYYPKWLRYMAACAGLLPKESD >gi|312953956|gb|AENW01000058.1| GENE 68 70502 - 72043 1685 513 aa, chain - ## HITS:1 COG:CAC0094 KEGG:ns NR:ns ## COG: CAC0094 COG0155 # Protein_GI_number: 15893390 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Clostridium acetobutylicum # 4 512 3 515 516 401 40.0 1e-111 MNDDLREELRSEIEDFRTQTKRFLDKELNVKEFKGYSGGFGSYAQRGATSFMLRLRMNQG VMTKDKLKFICDTCKEHGVSRAHFTTCQTIQLHDLSGMEIPSIMSNALDHGIVCRGGGGD FPRNVMCSPLSGVDPQEAFDVLPYAARVGEYLLSIVNKYTLPRKLKVAFTNSSRNEAHAT FRDLGFVANPDHTFDVYCAGGLGNNPRMGVRVGEHVAPETILYYVSTMVLMFMEFGNYEN RAKARTRYMQETLGSEGFVDAYRERLKRALQGQSLTIAVREEAITKTGDAQVLSDRRVFA QKQHGLYAVYYHPIGGSLTPQKLQEIYDCIRDMEAVELRLTPQQGVYIINCTAAEAKCVL AVTGDGARNTFEESTACIGASTCQVGLRDSQGVLKDVILYLREKNYADHVLPKIFISGCP SSCGTNQIGQLGFQGTVKVIDRKPYPAFTLSVSGSDSLYHERFGNVAGVVLEEDMCLFLA AIADAVTAAGMDFNTWLEKEKEQLDAILNTYLK >gi|312953956|gb|AENW01000058.1| GENE 69 72226 - 73437 1105 403 aa, chain + ## HITS:1 COG:AF1975 KEGG:ns NR:ns ## COG: AF1975 COG0373 # Protein_GI_number: 11499557 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Archaeoglobus fulgidus # 1 389 1 395 437 145 27.0 2e-34 MEFGIYGVSYKEADADVRDCTAFSDTQKMELYNQLLDVDITQAVILSTCNRSELYFIYEK EEQLDQIRKLFLAAAGKAVPLFLKTGVTAACYLFEVAAGYHSMVLGEDQILGQVQSCYQM ANQCQACGKQLHRMFQSCFAAVKQLKTAYKISEHPISIAYLAVKNIRNAMSLRNASVLVI GSGEMAALMLQYLQEEELSALYVCSRSRYKARQVMSAAMEYIPFSKRYEVLPYCDVICSM TASPHRILRREDMPPIDRKQLYVDLAMPRDIDPQLAQRGRVVIDIDHLQREADEQLEQRR ALLQKAHAMLETAAQEAYASLHSQEVDHLIQSLQQRSEQMAADTYALLQTRLQLSPHEQQ VLKKVLHTSFLRMVKEPMLALKKAKGQDQQLYARLLETMLKGD >gi|312953956|gb|AENW01000058.1| GENE 70 73440 - 74339 999 299 aa, chain + ## HITS:1 COG:BH3046 KEGG:ns NR:ns ## COG: BH3046 COG0181 # Protein_GI_number: 15615608 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Bacillus halodurans # 3 299 4 308 311 201 40.0 2e-51 MHIRMGTRGSALALAQCNEVKALLEKAYPQHSFEICVITTKGDRIQHVALDQMKDKGIFV KEIEQQLLEHTIDLAVHSMKDMPSVLDERLCFTETLLREDARDVLVLRNAASLESLPLHA RIATGSKRRRFQLLRQREDLEIVGIRGNIETRLKKLEDQQLDGIVLAAAGLKRLQLAQYI TQTLPEHIMVPAVAQGAIAIEVHKKRNDLVELVNALCTKRVDEEVCAERAFLQELNGGCH TPLGARCILHEADAELFAVYGSEDGTRLFDLHVSGPRAQAQAMAMEAAQRLRKKVEEGL >gi|312953956|gb|AENW01000058.1| GENE 71 74336 - 75796 1495 486 aa, chain + ## HITS:1 COG:lin1164_1 KEGG:ns NR:ns ## COG: lin1164_1 COG0007 # Protein_GI_number: 16800233 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Listeria innocua # 2 250 4 252 252 228 46.0 2e-59 MIYLTGAGCGNWELLTLRAMRMIQKADCILYDRLLDPEILTFAPKHCDCIYVGKKAGKHA MAQEEIQRLMIEKAARFDTVVRLKGGDPCVFGRVGEEAQALAQAHVPFEIIPGISSGIGG LAFAGIPITHRDYASGARLMSAHGKAGTMSDLDYAGMAHTRDTLIFYMGLQQLSAIVSGL MQAGRNPNTPIALVSNAGRATQTMVTATLKDIEDRDLSAIVSPALIVIGGVINLQEELNF MKRRPLFQKRYLLPQFADAKRELQLELQDLGAAVDCITTGRICANPALLDDVNLQETDIL VFSSRNAIEIFFTQLVQRRQDVRQLSTVKIAVVGEKSRQVLARYGIQADIQPQQEDSEHL ALELQKHISKNDRLVLVKADNDNRVLFEQLQEHAHVSLCKAYTVQELPFDLPQHVYDGAL FTCSFHVHACLGRLMECQDVTELKVYSMGAHTTRALRSYGCQHIIELPKADKGLFGTCII EEEAHV >gi|312953956|gb|AENW01000058.1| GENE 72 75789 - 76760 1274 323 aa, chain + ## HITS:1 COG:CAC0100 KEGG:ns NR:ns ## COG: CAC0100 COG0113 # Protein_GI_number: 15893396 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Clostridium acetobutylicum # 3 312 4 313 320 387 60.0 1e-107 MYRGRRLRKNQVIRSMMKETVLTKRDLIYPLFVVEGENICREIETLPGVYHYSIDRLCEA LDEMRGAQVLSCILFGIPNHKDACGTQAYAQDGIVQRAIRFIKSYAPEIYVIGDVCMCEY TDHGHCGILNAEGDVMNDETLSYLNRIALSYAQAGIDMVAPSDMMDGHIASIRQTLDSAG FQNVAIMGYSAKYASSFYGPFRAAANSAPSFGDRKGYQMDYANREEALRELQADVDEGAD VLMVKPALAYLDIVREAKEQFSLPLAVYNVSGEYAMLKMAVDQGLVREEAIFESILAMKR AGADLIITYFALYLARKIDEGVQ >gi|312953956|gb|AENW01000058.1| GENE 73 76762 - 78051 1130 429 aa, chain + ## HITS:1 COG:STM0202 KEGG:ns NR:ns ## COG: STM0202 COG0001 # Protein_GI_number: 16763592 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Salmonella typhimurium LT2 # 4 428 2 426 426 461 52.0 1e-129 MKHTSSLALFHEACALMPGGVNSPVRSFSSAHADCLFADHAYGSHIVDVDGNTYLDYIGS WGPMILGHAHPLLSGHLEEVIQKGISFGLCTAQEVELARLITDAYPGLAMVRMVNSGTEA TMSAIRTARGFTGRDKIIKFEGCYHGHSDGLLVKSGSGALTFATPTSPGVPADVVKHTLV CSYNDLENVEAVIKANEQQIAAVILEPIAGNMGVVKAEPQFLQGLRRLCDVHGIVLIFDE VISGFRVRYGGAAELYGIVPDMACFGKIIGAGLPVGAYGGRADIMQSVSPSGPVYQAGTL SGNPLAMHLGCRLLRYLKEHPETYTELEEKGAYLKEGMQTILQEMKLPYQLHQAGSLLTL FFTRQSVHSFTDVQTCDVTLFERYFRYLYDHGILIAPSPYEAMFLSTAHTYEELDHTLQI MREALKQLI >gi|312953956|gb|AENW01000058.1| GENE 74 78048 - 79292 1064 414 aa, chain + ## HITS:1 COG:no KEGG:Gbem_0405 NR:ns ## KEGG: Gbem_0405 # Name: not_defined # Def: siroheme synthase (EC:1.3.1.76) # Organism: G.bemidjiensis # Pathway: not_defined # 5 161 6 166 224 80 30.0 9e-14 MSLCVQLSLQGVAVLVIGGGRIAYRKCCQLEQEGAELVVIAKQFDACFQGAAYPCITDSY RPQQLQGKMLVLACCDDLISNRQICEDAKQAGIFAMSVRQNCGASMHALAVEETAEYVLA AGTKGASPLLARQMLKEMNAVVKKNYASRIAMLRKLRQYILQHIQKEERPQLLSRLVRLS QRDLYCIEQALQGKDLQLVCFHGVKEDVSQELENFCAAIEHRKTNLVAAAAFLFEGVSDS SAQSVAQWLQIVKSLHIPVTLVPMLFQNGRYYSRLLSIKGENVRVKPLMFQERSEVWQCL QEVRRESGCANLLVIYHSCVDGAFSELLQGLMKEDVHFHAVHEKQTMDCILPWREESVAI LPMYMLRGSHYRKDSDGGSALVQSLQKQNCSVHVLQASCIELRAFQEFIIQKME >gi|312953956|gb|AENW01000058.1| GENE 75 79579 - 81027 1456 482 aa, chain + ## HITS:1 COG:BH1426 KEGG:ns NR:ns ## COG: BH1426 COG1027 # Protein_GI_number: 15613989 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Bacillus halodurans # 8 471 2 465 471 499 52.0 1e-141 MEMENMTTQFRIEKDSLGEVQVPCDALYGVQTVRATQNFPITHLRTHPAMIRSLGMIKKA CAMANHECGHLDDERTGYIIAACDEIIQGKLDCWFITDVIQGGAGTSTNMNANEVVANRA AQLAGKALGVYDYIHPNDHVNFGQSTNDVFPTAGKLTALFLVEDLLEELMLLQEALLDKS IEFNDVIKLGRTHLQDAVPIRMGQEFHAFATAIVRDIRRIKVAFSNLKSVNMGATAVGTG INTDERYKRICVKHLCDITQIELTSARDLIDGTRNVDPFVFAHASLKTLCVSLSKMCNDL RLMASGPKTGLAEIVLPARQPGSSIMPGKVNPVIPEVCNQVCFQVFGNDVTITKAAEAGQ MELNVFEPVLFFNLFQSIDLLRNACHTLRIHAVMGIQANTEHCKEVMENSLGTATALAPH IGYAQASRMAKLALKENRKLKELILENGLMSKDKLEEVLNIREMTRAGIPGMHKKSKKQT GR >gi|312953956|gb|AENW01000058.1| GENE 76 81242 - 82429 1597 395 aa, chain + ## HITS:1 COG:BH1535 KEGG:ns NR:ns ## COG: BH1535 COG1686 # Protein_GI_number: 15614098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 1 388 1 378 387 296 41.0 5e-80 MKKLIVLCLSICLCMGLLPQQIHAQDDKTKQEPAQNAQDLAPSAKAAYLVENTTGKVIYA KHETDKLYPASMTKMMGLLLIFEALHDKKISWDESVSASEYAASMGGSQVFLEPGESMSV RDMVKSICIASANDAMVAMAEKVGGSNDHFVAMMNDKAKELKLSNSHFMNATGLHDPEHY TCAKDMSIIARALIAEGGEELLRITSTYDAYIRENTDKKFWLVNTNKLLKQYEGVDGLKT GFTTEAMSCITVTAKKKDLRLVAVAMGEPSSKQRNAEIKQMLDYGFSQYAQGLLYPKGTK LKTYTMENGKPSSVNLVTLKDLVYVFEKGSEPKEQKKEITITKDTPPYKAMEAIGTVKIT MSDGYTMEAPVGVDQDVEQLNYLDIFMKAFSDTLA >gi|312953956|gb|AENW01000058.1| GENE 77 82507 - 82668 217 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSVLWIVGIAAVFFLFVLLYALCRVSADADEQAGYMEEYSSDLDEGFDEEEF >gi|312953956|gb|AENW01000058.1| GENE 78 83437 - 84021 335 194 aa, chain - ## HITS:1 COG:no KEGG:Cthe_0203 NR:ns ## KEGG: Cthe_0203 # Name: not_defined # Def: response regulator receiver/ANTAR domain-containing protein # Organism: C.thermocellum # Pathway: not_defined # 9 193 3 188 190 131 39.0 1e-29 MSLKERCYSILIVSATDSFTSAIGVLFPESRYTPIHNATTINVAKRMIAERSYDFVIINS PLSDDIGTRFAIDTCTLKHTAVLLLVKADIHATIHDKVAEHGVFTLPKPTSKAILIQALY WMESMRERLRQFEKKSVSIEEKMAEIRIVNKAKWLLISELKMSESDAHRYIEKQAMDQCI TKRSIAEDIIKTYS >gi|312953956|gb|AENW01000058.1| GENE 79 84050 - 85261 197 403 aa, chain - ## HITS:1 COG:MA4216 KEGG:ns NR:ns ## COG: MA4216 COG0174 # Protein_GI_number: 20093006 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Methanosarcina acetivorans str.C2A # 4 400 9 420 447 306 41.0 4e-83 MKYSKQEILQYVSEEDVKFIRLAFCDVFGKQKNISIMPEELPHAFEDGIAIDASAIAGFG DETHSDLLLHPDADTLMPLPWRPEHGRVVRLFCNISYPDGRAFECDTRSILKKAIQVADK AGIHFYFGAEQEFYLFTVSETGEATKNPYDNAGYMDIAPDDRGENIRREICLTLEQMGIY PERSHHEQGPGQNEIDFRYSDPLTAADNAMTFQTVVKTVAGCNGLIADFSPKPLADKPGN GFHINISAKADDNSDYLHQIIAGILAKVCDMTLFLNPLNCSYQRFGNDKAPQYISWSSEN RSQLIRIPAAVGKYRRAELRSPDPTANSYLAFALMIYAGLYGIQNHLQLAEPTDINLYKA NADVLSKFKMLPSSLRDACESALNSDFIKQHIPNEILEIYCHR >gi|312953956|gb|AENW01000058.1| GENE 80 85280 - 86002 544 240 aa, chain - ## HITS:1 COG:TM0394 KEGG:ns NR:ns ## COG: TM0394 COG0070 # Protein_GI_number: 15643160 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 3 # Organism: Thermotoga maritima # 1 237 1 243 245 219 48.0 4e-57 MQLINATGLDYKTINEMIRKTDDSYTIKACCGQRFIGAGMSNKNITILGIPGNALGAYLN DAVITVNANAQDAVGDTMNEGKIIIHGNIGDAAGYAMRGGKIYVKGNAGYRAGIHMKAYK RKIPVMIIGGSAGSFLGEYQAGGIIIVLGLNSKTEHIVGHFPCTGMHGGKIYLRGNYDTI NLPKQVTAKVATSDDMKEIEEYLCEYCLDLGQDLETILNASFTVITPDSKNPYKQMYVAN >gi|312953956|gb|AENW01000058.1| GENE 81 86115 - 87272 739 385 aa, chain - ## HITS:1 COG:AF0953_2 KEGG:ns NR:ns ## COG: AF0953_2 COG0069 # Protein_GI_number: 11498558 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Archaeoglobus fulgidus # 1 385 44 433 433 530 65.0 1e-150 MNASQVTNPSIDPLREPMETRVYLGKKPEKIKRLSNGKLSCKLPPQLELSMPLLFSAMSY GSISYNAHKSLALAATELGILYNTGEGGLHEDFYCYGEHTIVQVASGRFGVHEQFLNTGA AIEIKMGQGAKPGIGGHLPGTKIVGDVSRTRMIPEGSDAISPAPHHDIYSIEDLRQLVFS LKEATAYKKPIIVKVAAVHNIAAIASGIARSGADIIAIDGFRGGTGAAPTRVRDSVGIPI ELALAAVDQRLRDEGIRNNVSLVVGGSIRNAADVVKAIALGADACYIATAALLALGCHLC RTCQSGKCNWGIATQNPDLVKRLDPEIGSKRLVNVMKAWQHEIKELMGGMGINSIEALRG NRLMLRGIGLNEKELEILGISYAGE >gi|312953956|gb|AENW01000058.1| GENE 82 87611 - 88714 522 367 aa, chain - ## HITS:1 COG:TM0398 KEGG:ns NR:ns ## COG: TM0398 COG0067 # Protein_GI_number: 15643164 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 1 # Organism: Thermotoga maritima # 8 356 15 359 377 377 50.0 1e-104 MKKEGQIRIPSGCAIAAVISKEGNRMSGEMIIDSMKPMHERSNGLGGGFTGYGIYPQYKD FYAFHMFYDCRTTRKKCESFLKEHFEIIHSELIPTCKIPTITDEPIIWRYFVDPLKSVMT TMQLDEKEFVARTVMKINTDMPGAHVFSSGKNMGTFKAVGFPEDVGVFYKLEEYEGYSWI AHGRYPTNTPGWWGGAHPFTLLDYSIVHNGEISSYDANRRFIEMFGYKCTLQTDTEVITY MMDYLLRVQELTLEEVANVIAAPFWSTIFTESNLELRDKLKYLRTIFSSLLITGPFSIVF GFNGGLMALNDRLKLRSMVVGEKDDKVLIASEEAAIRMMEPHAENIWAPDGGEPVIVKVK EGANEWA >gi|312953956|gb|AENW01000058.1| GENE 83 89018 - 90352 968 444 aa, chain + ## HITS:1 COG:CAC0737 KEGG:ns NR:ns ## COG: CAC0737 COG0334 # Protein_GI_number: 15894024 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Clostridium acetobutylicum # 1 442 1 442 443 569 64.0 1e-162 MTYVDEVIEHVVKKNPAEPEFHQAVKEVLESLRVVVDANEEKYRKDALLERLVHPERQII FRVPWIDDKGQVQVNTGYRVQFNSAIGPYKGGLRLHRSVNLSIIKFLGFEQIFKNALTGL PIGGGKGGSDFDPKGKSDREIMAFCQSFMTELCKYIGADTDVPAGDIGTGAREIGYLFGQ YKKIRGVYEGVLTGKGLSYGGSLARSEATGYGLLYLTEELLKLNGISLKGKTVAVSGSGN VAIYAIEKALQLGAKVVTVSDSTGWVYDADGIDVRVLKEIKEVKRARLSEYKSYRPNSEY HEGRGVWSVKVDLALPCATQNELTLEDAKQLVANGCLAVCEGANMPTTLKATQYLQNNDV IFAPGKAANAGGVATSALEMSQNSMRMSWSFEEVDSKLKDIMVTICHNISDAAERYGAKG NYVLGANIAGFERVADAMSAQGIV >gi|312953956|gb|AENW01000058.1| GENE 84 90467 - 92563 1134 698 aa, chain + ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 1 697 1 696 696 805 56.0 0 MKNVSEYFGSLVFDDRVMKATLSAEVYQSLKKTIDGGERLDISVANAVADAMKDWAVANG ATHYTHWFQPLTGITAEKHDSFISPSPDGGVIMEFSGKEMIKGEPDASSFPSGGLRATFE ARGYTAWDPTSYAFIKGKTLCIPTAFCSYGGEALDKKTPLLRSMEALNKQALRILRLFGN EDVKYVRTSVGPEQEYFLITKEMFDKRPDLQYTGRTLFGVKPPKGQEMDDHYFGVIKPKV AAFMEDLNDELWKLGILAKTEHNEVAPAQHELAPIYTTTNIATDHNQLTMEIMQKVAIRH GLVCLLHEKPFAGVNGSGKHNNWSLATDTGVNLLSPGETPYENAQFLLFLCAVIKAVDDY QDLLRISVATAENDHRLGANEAPPAVVSMFLGDELNAILEAIETDAPYIAAGKTKMKLGV SVLPRFTKDTTDRNRTSPFAFTGNKFEFRMLGSSNSIACANIMLNAAVAESLKIYADRLE GVEDFESALHEMIKKTIKDHKRIIFNGNGYDDNWIKEATEKRGLLNYCTTADCMPHLMDK KNVDMLISHKVFTERELESRMEIMLDNYCKTVIIEANTMVVMAKCSIAPAVEKFTASLAK NASIKKSFDDSIPCAYETGLVKKLSILTDKIDMAVDELKTSLVEIQDVRGIIEESVMIRD EILRKMSELRIACDEAEMLTSKEYWPYPSYGDILFSVK >gi|312953956|gb|AENW01000058.1| GENE 85 92587 - 94299 1038 570 aa, chain + ## HITS:1 COG:TM0402 KEGG:ns NR:ns ## COG: TM0402 COG0004 # Protein_GI_number: 15643168 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Thermotoga maritima # 6 406 31 423 435 393 54.0 1e-109 MLYSPVNTIWVLVGAALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVG FGIMFDAGNGIVGSFDPLIKGDYGHILPSGVPLWAFAIFQTVFCATSATIVSGAMAERTK FSAYCIYSAAISLLIYPVSGHWIWGGGWLSELGFHDFAGSTAVHMLGGVCAMIGAAILGP RIGKYDKNGKPKAILGHNITFAALGVFILWFCWFGFNGASTAGMDSDALMETAGRVFFNT NIAAAVACCTTMIFTWVRYKKPDVSMTYNAALAGLVGVTAGCDAVSSVGAAGIGIVCGIL VVLSIEFFDKVVKIDDPVGAVSVHCVCGAVGTVLTGLFATGVTTEKGLFYGGGLHFFQVQ TLGVISVTAYVAIVITIVFLVIKHTLGLRADKEDELTGLDISEHGLLTAYAGYAMLPDIS EEDGDEPVMVAQGVPVAEAVEVKKMPSLLDGMPKITKIAIICKEHKLEALKTSMMNLGIK GMTVSHVLGCGVQKGKPEYYRGVQVETTLLPKVQVDIVVSKIPVRSVIDVAKKVLYTGHI GDGKIFVYDVENAVKIRTGEEGVDALQDID >gi|312953956|gb|AENW01000058.1| GENE 86 94580 - 96148 679 522 aa, chain + ## HITS:1 COG:L00396 KEGG:ns NR:ns ## COG: L00396 COG0367 # Protein_GI_number: 15672334 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Lactococcus lactis # 11 521 15 529 530 608 59.0 1e-174 MGYCSRSAAYDTFMKGFEATISRGPDDSRVIDTGKGYLGFHRLAIMGLHDAGMQPFQSDK SYAVCNGEIYGFEELRSRLSRKYEFKSDSDCEIILPMYKEYGTAMFAMLDAEFACIIYDG EREEYIAARDPIGIRPLYYGYDKQEAIIFASEPKNLVGIVENIMPFPPGHYYKDGKFICY LDISTAAKVCEDDLEKVCRNIRKKLVSGVEKRLVADAKVGFLLSGGLDSSLVCAIAAKKR KDAIKTFAIGMREDAIDLRYAKQVANHIGSDHTEIFMTPDDVIASLRTVIYVLGTFDITT IRASIGMYLICKAIHEKTDIRVLLTGEISDELFGYKYTDFAPDEEAFQLESQKRIKELHM YDVLRADRCISVNSLEARVPFGDIDFVKYVMSIDPKLKMNRYGKGKYLLRHAFEDGDYLP DEILWREKAAFSDAVGHSMVDYLKAYAEEIYTDTEFKDKCKNYDHAQPFTKESLLYREIF EEYYTGQSKMIVDFWMPNKEWDGCHVNDPSARVLSNYGDSGI >gi|312953956|gb|AENW01000058.1| GENE 87 96196 - 97623 791 475 aa, chain + ## HITS:1 COG:CAC1392 KEGG:ns NR:ns ## COG: CAC1392 COG0034 # Protein_GI_number: 15894671 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Clostridium acetobutylicum # 5 465 18 474 475 485 53.0 1e-137 MAIHEECGVFGIFGTKRENVANIAYYGLYALQHRGQESCGIVVNDDGVFSSYKDLGLVSE VFSKDTLSSLSKGNMAVGHVRYGTTGGTTRSNTQPMEVNHQRGKMAIAHNGNLSNSLELR DKLELSGAIFNTTSDTETIAYVITRERLKVSSIEEAVSKAMNSLEGAYSLVLMSSTKLIA ARDPHGFRPLCYGKMMDGRYVVASESCALSAVGAVFIRDVLPGEIVVFSKENVVSRKEHC NKEKRKTCIFEYIYFARPDSVIDTISVSLSRCKAGELLAESYPVDADVVIGVPDSGMEAA LGYANASKIPYGIGLIKNKYIGRTFISPGQDERLDQVRIKLSPVKNVIEGKRVVLIDDSI VRGTTSKRIVKLLKDAGAKEIHMRISAPPFLHPCYYGTDIDSEENLIACHHNIREIEEIL GVDSLGYLPIEKLGRLVEGTEYCAACFNGEYPTNIPKDLRKDRFEGKLSEKICSG >gi|312953956|gb|AENW01000058.1| GENE 88 98184 - 98501 327 105 aa, chain + ## HITS:1 COG:BS_spoIIAA KEGG:ns NR:ns ## COG: BS_spoIIAA COG1366 # Protein_GI_number: 16079404 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Bacillus subtilis # 7 102 11 106 117 72 34.0 3e-13 MKHQYIDGILYFYFYGDLDNLTVCNLKQICIDLIEKYQPKTVKLDFEEVTFVDSTGIGFV LARYKQLQKLHAQLILCNLSRVNQTLFKMSGIFQIMKHERNEVKL >gi|312953956|gb|AENW01000058.1| GENE 89 98498 - 98935 538 145 aa, chain + ## HITS:1 COG:BS_spoIIAB KEGG:ns NR:ns ## COG: BS_spoIIAB COG2172 # Protein_GI_number: 16079403 # Func_class: T Signal transduction mechanisms # Function: Anti-sigma regulatory factor (Ser/Thr protein kinase) # Organism: Bacillus subtilis # 2 141 3 142 146 121 42.0 5e-28 MNTMKLEFVSRLENEAFARTSAVAFLMPLNLDMEAIMEIKTMLAEAIVNAMIHGYESREN GTIVLQISYDEEFIHMTVQDEGCGIDDLQLAMQPLYTSKKHMERSGMGMTIMQTFADDFH IESEKGKGTLVTIKKRIHHGKDSEQ >gi|312953956|gb|AENW01000058.1| GENE 90 98913 - 99638 937 241 aa, chain + ## HITS:1 COG:BS_sigF KEGG:ns NR:ns ## COG: BS_sigF COG1191 # Protein_GI_number: 16079402 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus subtilis # 8 238 20 250 255 201 47.0 8e-52 MEKTASNEELIERIRLGDEEAKSCFVQQNSALVYSIIRRFSRQRISNEDLFQIGCVGLMK ALNNFDTSYEVKFSTYAVPIIMGEIKRFFRDDGSIRISRSLKEGYLQMVKAKEVLLQKLN HEPTYQEIADAMELDVADVILAFEANQFIYSLDETIYENDGSPILLEDKVSNKKEEDVVM KVSLRDEIQKLDQREQLLLHYRYDLSMKQEEIARKLNISQVQVSRLEKKIIKKLKERLAV A >gi|312953956|gb|AENW01000058.1| GENE 91 99786 - 100439 708 217 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400807|ref|ZP_06644952.1| ## NR: gi|293400807|ref|ZP_06644952.1| acetyltransferase, GNAT family [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 212 1 212 212 178 43.0 2e-43 MPLSEFYLMNDEQIASLHEQLAENFYDDDLYKTVFMDDRTRLKTLRYLFRHYVKALKPYC HFLADSAECRSVMVVWDSTLEQPLQYHLQLLWLNLKMIPMLAGLRSVKSIRHVIECWDMF TSRWIQEFVQGDYLHLDLFFTAKELRGTGIGSAMLKALLVHAQEIGKDVTMETHHAENLS LYYRAGFVLMSEITHPDHDIHQYNLMRKCIREENLNE >gi|312953956|gb|AENW01000058.1| GENE 92 100432 - 101484 1360 350 aa, chain + ## HITS:1 COG:no KEGG:Sterm_3020 NR:ns ## KEGG: Sterm_3020 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 4 347 5 350 367 64 23.0 5e-09 MNSKHRVHNFWSYFLTIQQPLETALREQDRHEYEHLLNDINEQLKTVCGCKLEVEMSETG FFEMTFATGGDKTAQLCSALLKKDAPQQLSENWIINAFRPPLSERALNSYLQLNGQTVRG ADFKVYYTIEEESKTVELKVYCAALQGLEETNKESIVAYMLELFIGELEFEARISRVEIL DAEIDEENVCLLPNLYEDLCDIIIDQEWMEYHDPLSIYMAYKLDEKPVSETLRRDMKLIV TTNPQLQEEVLNKEYATCKDFADKGGEYGYLYYEKLYEDEKEALVRQQLEKEINDLLYPM SIARTMGGAIGMYYSYIDLAVFDRDGFAIALEKINEKMKFKIYYHSFLED >gi|312953956|gb|AENW01000058.1| GENE 93 101749 - 102477 950 242 aa, chain + ## HITS:1 COG:BH1285 KEGG:ns NR:ns ## COG: BH1285 COG1191 # Protein_GI_number: 15613848 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 13 232 16 234 235 221 60.0 9e-58 MFTTIFEVLSNALCYVGYIRSNSFQQPLDKEEEARCISLLSERDEEARNKLIEHNLRLVA HIVKKYDIKKEQTEDLISIGTIGLIKAVDSFKPEKGHKLTTYASKCIENEILMYLRSSKN YFQNVSLNEPIATDKDGSEITLIDAISSPEDSSIIDDMIVEDNIARLKRYIHVLDARELE IITKRFGLYGQEEETQREIARQLHISRSYVSRIEKRAFMKIYREFQKEEKRKERLRQNKE KE >gi|312953956|gb|AENW01000058.1| GENE 94 102681 - 103721 1268 346 aa, chain - ## HITS:1 COG:PAB0869 KEGG:ns NR:ns ## COG: PAB0869 COG1363 # Protein_GI_number: 14521514 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Pyrococcus abyssi # 13 343 7 332 335 238 41.0 1e-62 MEYHVEETTIEALTRMLIETPSPVSYYEEIHPLMERLAKKYGHTLTYDRKRTAYIRVEGE DTTKTVCVGAHLDTIGLMVRHINDNGTLALRNLGGINYNNIEGCSVQVHTRDGNTITGLL ACTSHSTHVFDDARSAVREESNMMVILDELVHSSDEVRALGIEHGDIISIDPDYRFTKSG FIKSRFIDDKAAVAAVFAVLEDLQKTGRKPQYTTLFAFPLYEEIGHGGAYLPQEVSEYVA LDIGLIGPDYCGSETKVSICAKDNYTPYDRALTTKLIHLAGDQKLDYSVDVFYHYGTDAS AAIRAGNNVYAAAFGMGCFASHGMERCHIQSVVQTAKLLYAYLLSK >gi|312953956|gb|AENW01000058.1| GENE 95 103743 - 104999 1330 418 aa, chain - ## HITS:1 COG:TM0342 KEGG:ns NR:ns ## COG: TM0342 COG0477 # Protein_GI_number: 15643110 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermotoga maritima # 4 393 7 394 413 132 26.0 2e-30 MKAFNRNFILMIIGQIISLFGNAILRFSLSLYVLQVTGSASIFATILAVSILPTILLSPF GGILADRVSRRSIMLSLDFLTSFLIFGFSMVSTRGFSIVLVAILMISLSIIQAFYQPSVQ ASIPLLVSENQLMQANGIVVQINALATLLGPILGGFLFSFLPFSLLLNISGTAFFLSAIL ECIMRIPFQRVATDGSMLSIIRSDCRQSLHFLRHDNPTLLHLLLLLAGLNLVLSSFITVG LPVISNITLQLPPTFYGWLEAATGIGSIAGSIALPFFLKRVDMSGAWRFLLSGSLFLLPM ALVLFLHTPVYIAYACIFASSICIMLFAALFNIYAQTFLQKSTPNQLLGKVASMVTMVVM CSYPIGQSLYGILLETFATRVDLLILFACIASLIISLLSRNALKTIGNDCEKEAVLIQ >gi|312953956|gb|AENW01000058.1| GENE 96 105065 - 105796 844 243 aa, chain - ## HITS:1 COG:mlr0908 KEGG:ns NR:ns ## COG: mlr0908 COG1309 # Protein_GI_number: 13471041 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 30 182 6 163 236 73 29.0 4e-13 MQALHVTSDMIGYIHTKRMYDKGGAMARNKYPQRTVEKILEVSLALFNEKGYEKTTIQDI VNALGMSKGAIYHHFKSKDEIIEALSERCYHGDAQMELLRNASDKTGIEKLRAIIYRQIQ NEEKKQIDTISINLWKNPKIFMSGMAENLSVNSQIVERILKEGMEDGSIRSQDPLCAAQV LMLLLNYWICSPIVLKELDAIPAKVAYFRTLCDSMGIPVIDEPLEQELTSYFRILAQSMH ELP >gi|312953956|gb|AENW01000058.1| GENE 97 105873 - 106397 558 174 aa, chain + ## HITS:1 COG:BS_yqeG KEGG:ns NR:ns ## COG: BS_yqeG COG2179 # Protein_GI_number: 16079622 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Bacillus subtilis # 3 168 4 169 172 113 34.0 1e-25 MLKLFTPDYYIHSFSALRPEYLLEHGIRLLVCDIDNTLVPHDVALPDEKAVQFIRGMQEA GIRVVFISNNVEERVETFAKGLQADCYPFAMKPLPKTYRRMLKEQGVDKKEVAVVGDQLM TDILGANLMGLHTVLTAPVVTRDLSFTKFNRFFENIVFRLLQITGRLRKGEYDE >gi|312953956|gb|AENW01000058.1| GENE 98 106390 - 107472 1382 360 aa, chain + ## HITS:1 COG:SP1749 KEGG:ns NR:ns ## COG: SP1749 COG1161 # Protein_GI_number: 15901581 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pneumoniae TIGR4 # 1 360 1 368 368 256 39.0 4e-68 MSNKICKGCGVVLQSSDAAAIGYTPKMEADYCQRCFRIRHYDDVVISMKQGIDSDAVLQK INAMDALVVWVVDLFDFESNLLPGINRHLLGKDILMVATKRDLLPATLGNEKLSQFLLRR LKEEGILVQGIVVCGDLAAHARREDNASVDEVCAAIAHYRKGRDVVVMGMANAGKSTLLN AICDGVDLTTSRHPGTTLDFNSIAMEGYQLYDTPGLTRMDSLLTHVDDGLLKTVIPLKPL KARGYQLKGNQTLSLGGLVRLDLIGCEQVSCVAYFSERLPLHRSKQEKADVLWAQHYDEI LTPVIGEREHMKKFSYGHVQEHKLDVVIHGLGWFCIRGDVASVDVYVAQQGNVTFRKAMI >gi|312953956|gb|AENW01000058.1| GENE 99 107472 - 107756 217 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Anoxybacillus flavithermus WK1] # 1 91 1 91 97 88 47 3e-16 MLTGKQKSELRGIAQTRKPLFQMGKDAISENLIKTISDSLEAHELVKVSLLKTCAITANE AAVTISAATHSEVVQVIGRTFTLYRRSKKNKLGL >gi|312953956|gb|AENW01000058.1| GENE 100 107760 - 108788 1014 342 aa, chain + ## HITS:1 COG:BS_yqeJ KEGG:ns NR:ns ## COG: BS_yqeJ COG1057 # Protein_GI_number: 16079618 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Bacillus subtilis # 2 180 3 187 189 105 35.0 1e-22 MRIAVLGGAFDPIHNGHLQIAKQALKQLRVDEVWFMPSAATPLKQTQAASFSDRAAMVAL AIRPYRHMKLCTLEHELEGVSYSIRTVKELKKRYPKHSFCWLIGDDQARQFDRWKDSEDL KQQLPFYVFSREQHTEQLPAGLQRVVMQLIPVSSSEIRKGHKLYQVPEAVRAYMGLHALY LESMVKEQMNEHRYLHSQSVAQLCVELAQAHGLDTRAAYIMGIAHDVCKQLPYEKAKAWM RAHMPDHLEEAAAIWHGYIGADYVNKVFHIRDRRILQAIYHHVKGRNRTDFDRILFIADK LDPSRGYDSRREIEISRKSLREGYRVVKQQQEAYLRKEGTLK >gi|312953956|gb|AENW01000058.1| GENE 101 108805 - 109143 467 112 aa, chain + ## HITS:1 COG:SPy0310 KEGG:ns NR:ns ## COG: SPy0310 COG0799 # Protein_GI_number: 15674477 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Streptococcus pyogenes M1 GAS # 2 106 12 116 125 92 45.0 2e-19 MDELLSIVQKAIDEKKGERALLYDFHELNPFIDHVVICSAPSVRQTHAIADNIKDRVREN GYEIRAMEGNSESRWVLVDLNSIVVHVFMNEERDHFQLEKLYADLPHEDFSL >gi|312953956|gb|AENW01000058.1| GENE 102 109140 - 109853 905 237 aa, chain + ## HITS:1 COG:L28696 KEGG:ns NR:ns ## COG: L28696 COG0500 # Protein_GI_number: 15672211 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Lactococcus lactis # 1 232 2 244 244 107 33.0 1e-23 MMYELLAHVYDALVKDDEATACWVELIKAHIRGTELLELACGSGEITIALAQEGYHVDAS DLSAAMIEEAKKKDGSEQVSWSVMDMCDLHTDKSYDGILCLCDSFNYLLKDEQVRALFQG AYRHLRDNGVFLVDMHSMDRLEEFAEEYNEAGHVKDLEYQWTIASEDDRIYQNFAFYDSE GRVTLEQHEQRVYEPAWILAELKNAGFQVEVYTDFTQAGICEGEKQFYICRKAGGIQ >gi|312953956|gb|AENW01000058.1| GENE 103 109850 - 110530 806 226 aa, chain + ## HITS:1 COG:BH1279 KEGG:ns NR:ns ## COG: BH1279 COG0775 # Protein_GI_number: 15613842 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Bacillus halodurans # 2 217 4 222 231 138 35.0 7e-33 MIAVIAAMDKEVDAIVSIMESHEHLMKSGIDFDKGILAGKELLVMKSGVGKGNAGMATTI LLENFSIDCIVNIGTAGGLQVQQNILDAVISTQVVQHDYDTSPVDGADGIGLYFEADQDL GDMCEQALNKLGVVVHRGLVASGDQFVAREAQLQRLNELFPDAVCAEMEAGAIAQVCAHY HIPFVVLRSLSDVAHSKDSHMDFMTYVEHASSRSASFCRELMKCMA >gi|312953956|gb|AENW01000058.1| GENE 104 110711 - 111169 653 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400782|ref|ZP_06644927.1| ## NR: gi|293400782|ref|ZP_06644927.1| hypothetical protein HMPREF0863_01067 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 151 1 151 151 167 54.0 2e-40 MKINGKSLAVSIGLLAVLLIVLLVESSIFISGPSRKYEEKIDEQMSAIRDTYKEIKNLHR DAFYYITYVGEDADNYVWFNDKGKAIVSRKKDTDQTDKVKQEVQKRYGAKDIQVALGYGY DNPVYAVECSAGQILLDYDSLKEVYFLKKGEA >gi|312953956|gb|AENW01000058.1| GENE 105 111171 - 111707 825 178 aa, chain + ## HITS:1 COG:BH1697 KEGG:ns NR:ns ## COG: BH1697 COG3935 # Protein_GI_number: 15614260 # Func_class: L Replication, recombination and repair # Function: Putative primosome component and related proteins # Organism: Bacillus halodurans # 1 173 6 202 233 62 30.0 6e-10 MEKWWNERFINRRDWILDHLKDLSLTIEETMVVLMIDFMNEHQIPITHGILADKLKKDSD EIDDILSHLSAKGYLALQFQNGKILFNIDGVFADNSEKSLAFDQSLFDLFESEFGRPLSQ MELQRMADWLKDYEQKLICYALREALTYDHKSFDYIERILVEWKNRGMTAEKYEGGER >gi|312953956|gb|AENW01000058.1| GENE 106 111707 - 112354 827 215 aa, chain + ## HITS:1 COG:lin2008 KEGG:ns NR:ns ## COG: lin2008 COG0177 # Protein_GI_number: 16801074 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Listeria innocua # 10 208 14 212 219 239 59.0 2e-63 MTTDEILDILEEMFPDAHCELEHRNAFELLVAVVLSAQTTDAAVNKVTPALFEAFKTPQA MAEADIHDIEDKIRRIGLYRNKARSIQNLSRSLLESFNGVVPESMKELTSLAGVGRKTAN VVRSVCFDIPSIAVDTHVERISKRLGLAKVQDSVEVVEQKLKRKLKRERWNRAHHLFIFF GRYFCTARNPKCEECPFKEFCKKDKLEAYRNSKKS >gi|312953956|gb|AENW01000058.1| GENE 107 112578 - 115871 3168 1097 aa, chain - ## HITS:1 COG:lin2006 KEGG:ns NR:ns ## COG: lin2006 COG0744 # Protein_GI_number: 16801072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Listeria innocua # 183 830 3 619 826 259 30.0 2e-68 MEQNPNEETVDVNASPQQPEAKDTLETTDDMDSQASVKMEGSTEADTSASKEKEAVPVET ALETEPAQDTEKAPVDADTKAEATENDTDEEKTSATTEVSDTAAAKTEAGAEGMPSDFNT AENASADTAVSEEAIPAENSPKASLENASSEDETFSEQAVQEPVSAEAVDTDILNEEMLV SEDAEEADSANRKKKPEKNKGKLSRGRKIVNGIIIAFLTIALLGSGTGAYLLYHIAHKAD PDGMVEKMKSDEPSVFYASDGKTIIGELGEESRENITYEQVPQSTIDAFLAIEDSRFYSH NGFDLPRFISSAFNNMKSGDLSQGGSTLTMQTVDNFIMKPVEDKMQKEGKYFSTKEKIER KIQEIYLSMCLDDELSKEDIMTRYLNQINFGQHTRGIQKGAQYYFGKNVEDLNLSESAFL AGVINAPNSNNPYNGIIDGDNYYQQAMKRRDETLYQMLNHGYITETEYKLAKATKLAFQV AGEPDAAELDPYKDYVRAAADEIIDKYGVDPATTPMKVYTALDINAQKAANKASSGKVVG LTDNKYYQIGFTVLNNKNGEVIAVSAGRTDIKSADGQVHFRFREPHQPGSSIKPIFDYAP SFDKIGYCTSRVFVDKAISFGNWNVINANGSYNGKVSMERAIAQSLNTPAVQTFDALLNR VGYDEMISYAKKMGFDPDVAKNMDIQYSIGASGMMASPTEMAAAYATLANGGTYNEAHMV RKIVYKNEDKTIKAKVQTHQPLSPQAAYMTSDLLYRAIFGKDSGWNLMSRLGFGAYPVYG KTGTSDWADDAWKYGGPMKDEWMINYTSEYTIATWSGFDSGIEGKPTYISEEILNANIPG WINKYMLDSIATGNEHMISSPGGISSYGGGMIKSEWLATAKQNNPLTIANSKTNNKALKS AVSSAKGMKSSDYTAETYSKLQAAIAAAEKILKDDMAPQEDIDKAKADLQAALNGLVSSA NKSSLNAALTKAAGINTSLYTPESIHALNAAVNSAKSVYDNKKSTQAQIDAQTSAVNNAI NTLVQKPVISRDALNEAINKGNAINRNSYTVESILQFESILNVAKTVYGDANATQAQIDE QTAKVNAALTEVLKPAQ >gi|312953956|gb|AENW01000058.1| GENE 108 115840 - 116457 335 205 aa, chain - ## HITS:1 COG:BH1703 KEGG:ns NR:ns ## COG: BH1703 COG3331 # Protein_GI_number: 15614266 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Bacillus halodurans # 2 190 3 198 199 199 53.0 2e-51 MIGYPNRKVMPTPAVKAQDNHMGRGMSLENDLNDSNAYYCSCDRALIHKKPTPIQVVKVD YPERSAAKITEAYYKTPSTTDYNGIYRGRAIDFEAKETRQKTSFPFKSIHPHQIEHLKKV IQHGGIGFFIIRFTCFEETYLIDAAILIDMYYEGERKSISYMKVKEVGSLIRMGLTPRLC YLDNVDALYFKEEKSYGTKSKRGNG >gi|312953956|gb|AENW01000058.1| GENE 109 116589 - 119240 2769 883 aa, chain - ## HITS:1 COG:BH1702 KEGG:ns NR:ns ## COG: BH1702 COG0744 # Protein_GI_number: 15614265 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Bacillus halodurans # 3 675 13 650 886 289 30.0 2e-77 MDKKQQPKAVRRKSGQGGGRIFRSIVIVFLALVLVGGVSVFFMLSTIVGSVDTDDMADKI VNREPSTFYAADGTKIYEWGGVSRENVTYKQIPQSTIDAFLAIEDSRYFSHNGFDLPRFI SSALFNVKSGSFAQGGSTLTMQTIDNFIMKPEEEKAEKEGKTYSALEKVERKVQEIYMSM SLEKDLSKEEIITKYLNEINFGDSARGIQKGAEYYFGKNVEELNLTESAFLAGVINAPNS YNPYRGYDKSTGDNFYQYASERRDETLNLMLKHGYITETEYKLAKSTKLAFQLTGEKKKS SAGSDKYYDYVYEAAKEVQALTGEDPALVPMKIYTSLDIHAQDHANELSSGRSVEFFSDS NFQIGFTVLNNQTGEIVAVSGGRGDVESKTYLNRYTEPKSVGSTIKPLLDYAPTFDKLGW ATSRVMEDKPLNITGWSVQNSDGNFYGKVSLERAVSKSLNTIAVQSLQALLESEGQDAMI QYLKNLGFSDSVADAFSLQYSIGGAEMKGSTTQMAAAYAALANGGYYIEPHMVTKVEYKD ESRTFDNKPKKTRVMSEQAAYMMSDLLYKAVNGKTKGENLMGSLGFGAYPVYGKTGTSDW ADLGVAYGIPVLAMKDEWMINYTSEYTIATWSGFDAAKEGAYFTMDMINANIPGWINKSM LDTISSNAVRIQQPDGISSYGGGLIKTEWLSSAAKNNPMTEQNANVTNSKLEAAISSAAG MNADDYTAESYAKLKEALDAARKVMANSAATQEEIDAARSALEAAMQGLVKKEETPKTDT SALSSALNSAQGYVDTTKYQSDKVAALQSAISSGNSVLANKDSTQEQIDAATAAINTAVQ NCISSPVQTTPPPDTGGDANNGNGTTPPSDNTQNNQNNQTPAP >gi|312953956|gb|AENW01000058.1| GENE 110 119553 - 119876 533 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400777|ref|ZP_06644922.1| ## NR: gi|293400777|ref|ZP_06644922.1| putative cell division protein DivIVA [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 107 4 110 111 129 73.0 6e-29 MEKRFKLKVEDVLNKQFNIDFKGYSSVEVDEFLDLVINDYQEYDAMIENLGERLQEYEKQ IAAMKAKIIELEGKQGAVQEESAAANGNVDILKRLTRLENAVFASKK >gi|312953956|gb|AENW01000058.1| GENE 111 120282 - 120470 58 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQEKCLLQACINKQSACWIKRTMMRYFHVSFFRDSGMKMRDLWDKKVKDEFCERFIYIKE FG >gi|312953956|gb|AENW01000058.1| GENE 112 120542 - 121486 1180 314 aa, chain + ## HITS:1 COG:lin1432 KEGG:ns NR:ns ## COG: lin1432 COG1426 # Protein_GI_number: 16800500 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 302 1 300 311 62 22.0 9e-10 MEEIGRLLKEKRLELGLTIEEVSDQTRLTQKHIKALEEGNISFFHDDLSYLRFFVKSYCD VLGLDFEDIKDELRKDVNDYTMTFTTSAQINHEEIEKNIAKSEKLSKVSTANVKTRQKRR FRKPDMSLVSLIAIVAVVAIVIMFAFVVFLKSDAGKGKTANNAQPTAPEQTENGTNKYPS SDEKKEEEGQQKEEEKEISISKTDATHYTIENLKDGEDLKFEVTFAGSSSGFSASVDGKV LDEPKAQVYEYKSSAKGTVKAKKGMKLELYVGYMYNTQLKINDKNVKLDDSIVNSSGAIT LEFTIAGDSDESSK >gi|312953956|gb|AENW01000058.1| GENE 113 121461 - 122060 263 199 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 2 195 478 669 904 105 32 1e-21 MTVMNLPNKLSMFRIVLVPVIACIYLFTDLPEAFGADVSGEHIAVSMTALLVLILFAIAS FTDYLDGHIARKHNLITSFGKFIDPIADKLLVNTMFILFAVDGVVPAVFVLIMIWRDMIV DGLRMNASAKGKVVAAGMMGKAKTVLQMFAIIFLLLNNLPFAFVSLPVADILFYAAVAVS VASGAEYFLKLKDIVMETM >gi|312953956|gb|AENW01000058.1| GENE 114 122063 - 122524 201 153 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 7 139 758 891 904 82 34 2e-14 MKALIERLKKDRLTIGSCESLTAGLFASTIAEVSGASAVLKGGIVTYWTECKVNVVHVRE EIVKKYGVVSAPCAKEMAEKARLLLDVDLCVSFSGNAGPDTMEGKPAGLVYCAIADRHRC EVYEFHLTMERNALRKKLVEEMGKQVIRFLDAC >gi|312953956|gb|AENW01000058.1| GENE 115 122558 - 123610 1407 350 aa, chain + ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 12 333 2 323 349 432 67.0 1e-121 MEKEKKSQDKDTKKKNLLDDTLKQIEKQFGKGSIMKLGDRASVEIDAISSGSIKVDEALG IGGYPKGRIVEIYGPESSGKTTLALHAIAEVQKKGGRAAFIDAENAIDPTYAKNLGVNID DLILSQPDSGEQALDITEMLIKSGAIDLVVVDSVAALVPQAELDGEMGDANVGLQARMMS KAMRKLSGIMNRSECTAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDIRRSEAIK NGTDIIGNKVNVKVVKNKVAPPFKVAQIEIMYGEGISYVAELLDLCVDHDIVMKSGAWFS YNGEKIGQGKEAAKTFIKSNPALMEELGAKLREKTAPKKAEVSEEKKEEA >gi|312953956|gb|AENW01000058.1| GENE 116 123763 - 125316 1810 517 aa, chain + ## HITS:1 COG:lin1436 KEGG:ns NR:ns ## COG: lin1436 COG1418 # Protein_GI_number: 16800504 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Listeria innocua # 8 517 11 520 520 427 49.0 1e-119 MDNPLIIFLSVLTGLAIGVVIMVIISKAGLNKDQQKASMLLKEAETKADSMVKQAVLDGR TQAHELKIAAEKEIKERKQEVTDMENKLLRREDNLNFRDETLTSKEKQIDVKSAQLADKM AMLDKKDKELQEKIDVQVEELERVASLTTAEAREELMAITEKRMEKETMAYIKEKEEEAK SIADEKARNIVALSIQRISSDEAVDRTVSVVSLPSEEMKGRIIGREGRNIKAIEQATGVD LIIDDTPETITVSCFDPIRREVARLALEHLIKDGRIQPGRIEEVVHKIKKEMDTNIMKTG EDTVFKLGIGRIDREIIRLIGRLKYRFSYGQNALQHSMEVAHLTGMMAAELGLNQQLAKR AGLLHDIGKALDFEVEGSHIELGYKFCKKHGEREVVLNAIQSHHGEVEPQFLISNLVIAA DTISAARPGARYEALQNYINRLEELEKITKSFDGVDSAYAIQAGREVRVMAVPEKMDDLG CHKLARDIKDKIEAELTYPGQIKVTVIRETRACELAK >gi|312953956|gb|AENW01000058.1| GENE 117 125318 - 126103 780 261 aa, chain + ## HITS:1 COG:BS_ymdB KEGG:ns NR:ns ## COG: BS_ymdB COG1692 # Protein_GI_number: 16078760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 258 1 260 264 233 45.0 3e-61 MNILFLGDIVGSVGRECVREQLPRLKEQYEIDLVVANAENSAHGKGITRKIYHQLLAMGI DVCTMGNHTFSKNDIYQFIEEADRMVRPANMEPLEYGQHTVVVKVNGMRVAITNLCGEVW MNNVVDSPFFCMEDILNDIDADIYLVDLHAETTSEKIAFTYQFAGRVQAVVGTHTHVQTA DERLVYGTAAITDLGMCGAYTSVLGRDVQEILTRFTTNEKTKFKIADGPGILCGAVVRID ETARKAIHIERIQIRPEQAEC >gi|312953956|gb|AENW01000058.1| GENE 118 126253 - 126426 159 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915265|ref|ZP_02077478.1| ## NR: gi|160915265|ref|ZP_02077478.1| hypothetical protein EUBDOL_01273 [Eubacterium dolichum DSM 3991] # 1 57 31 87 87 78 85.0 1e-13 MAVKVDVDTCIGCGACVGVCPVGALSMNDDGKSVCDEGTCIDCGSCVSACPVSAISQ >gi|312953956|gb|AENW01000058.1| GENE 119 126500 - 127936 583 478 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 49 465 8 423 451 229 33 1e-58 MKKQPGWALPNLKDAQVRTTKEAVIEKSLFQIPEQIRLLGQGKKYYLRTYGCQANERDSE TLAGILEEMNFTAVEHPEDADLILMNTCAIRKNAEDKVLGEIGSLKRLKRKKPDLLFGLC GCMAQEEDVVAKLLETYRHVNLIFGTHNIHRLPELLYDVMVNGNRSVEVLSKEGDVIENL PVRRFGKHKAWVNIMYGCDKFCTYCIVPYTRGKERSRMMEDILEEVRILKAEGFKEITLL GQNVNSYGKDLHMEGGFAGLLEETAKIGIERIRFTTSHPWDFTDEMIDVIARYENIMPFI HLPVQSGDSDILKIMGRRYTREQYLTLFHKIKERIPHCAISTDIIVGFPNETEEQFQNTL SLVDECRFDNAFTFIYSPREGTPAASMADNVELAVKQRRLQELNERWNLYAREKNEEYLG SVVKVLVDGASKKNPEVFSGYTETNKLVNFRRTTAQSGDIVSVKITACKTFSLDGEQI >gi|312953956|gb|AENW01000058.1| GENE 120 128138 - 129796 1955 552 aa, chain + ## HITS:1 COG:BH2398 KEGG:ns NR:ns ## COG: BH2398 COG0595 # Protein_GI_number: 15614961 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Bacillus halodurans # 2 550 7 555 555 350 32.0 6e-96 MDQVRIFALGGLDENGKNMYVVEVNEAIFIIEAGLKYPESDQLGVEFIIPDFSYLIQNKD RIKGIFITHAHDDVVAALPYLLKQINVPVYTGNLTANIIHDMLKKEGIKNVKIHRMKRAS KQTIGGVKVRTFPMTHAFPDNFGLAIATDQGYIVYTGEFIIDYDMLQQEYLCDLNELSDI GKRGVLCLLSESQSADRIGHTAPKHRITNLIEPIFEASHSRILISSYSQSLFRIIEIIEL AKKYNRKIFFHDKGMRELLHQLELVKYYHVPREMEVKEKDFKDDMEDVVVLITGNGKNLF RTMSNIANHEDKFVSFRKTDTIIVASPIVSGTELDANSMENEIYKEGGRIFTLDSKTVLS MHPSSEDLKMMLYLFQPKYYIPVKGEYRHLFVNANLASKMGYSPDRILILENGQVAQFEE KILKSVAEHLELEDTLIDGKENWDVTGVVLKDREVLSTDGVMIIGVGVSHKTKEVINGPD VQTRGLIYLKDADYIIKEVGNIMEKCIETAVKEKRYDNLTVRGEAREKISKYLSKETGKR PMVLPVILEINI >gi|312953956|gb|AENW01000058.1| GENE 121 129827 - 132187 2805 786 aa, chain + ## HITS:1 COG:BS_spoIIIE KEGG:ns NR:ns ## COG: BS_spoIIIE COG1674 # Protein_GI_number: 16078743 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 27 785 25 784 787 550 42.0 1e-156 MAKSKTRKSQKQKQMVENEVLVYIYSLVLITLSIIGGLQIGFIGELTTSIIKYVFGNLYG VIYGVIIVLCVMMMLKKSVRDVPMKYLIGIGVLLCAWIIAASIPQNETLKGMDILSRYLQ DSMLIFRGEIAAKGGLIGAFLVSLCTFLFDYKGTWIIVIALLILALILLLSGSGFARLKA GAASLAAPFVSMRKNHAAKGDARRERKQQAKKVKKEQEAEPKEAKSMFGKINIDERVRPG QVSFLDVDDDFDIQSDGRSTAFLADKEHALEEESDVLDKQAFKEAENKRIIEDTIGGEDT FVSSFQEDWSKYKLPRLTLLKDAGKKSRSTANASAANDAGRQLIEILDQFGVKATLVATH IGPAVTKFEVKPDLGVRVNKISNLQYDIKMALAAKDIRIEAPIPGKSAVGIEIPNVEKTS VSMKELMKNIPDKLAQSKMLFALGKDLMGNCVYGELNRMPHLLIAGATGSGKSVCVNSII TSILMRARPDEVKLLLVDPKKVEFTPYKEIPHLLGPVITDGDEANRALKVIVTMMDNRYE LFSMAGVRNIAGYNAYIEAHPEEGLSPLPWVVVIIDELADLMLVAAKEVEASIQRITQLA RAAGIHLIVATQRPSVDVITGIIKANIPSRIAFAVSSAVDSRTILDQMGAEKLLGYGDML YVPVGETVATRVQGVFVSDDEVSDICEFVSRQGKPKFDDAFVRLELLDGGVGPTSSETGD PLYDEVKEFIISTRKASTSLIQRKFSIGYARAARLIDTLEDNGIIGPARGSKPREVYAKS EQAEEE >gi|312953956|gb|AENW01000058.1| GENE 122 132327 - 133430 1358 367 aa, chain + ## HITS:1 COG:TP0319 KEGG:ns NR:ns ## COG: TP0319 COG1744 # Protein_GI_number: 15639310 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Treponema pallidum # 2 344 3 344 353 131 28.0 2e-30 MKKFLCVAASLLMAASLTACGSKDEGKKDDGKASESKADVVMITDVGTIDDKSFNQGTWE GVKAYGEETGKKVEYIKPTEKSDNAYKEAIDQAVNKYKAKVIVTPGYLFEPSIYEKQDTY PDVKFILIDGYPNDGAQENAKFKTAKNTVGIKYSENEAGYMAGYAIVKEGKTKLGFMGGI AVPAVVNFGYGFVQGAQDAAKEMNVEIEMKYKYTGTFNPSAEIQSEAASWYKNGTQVIFS CGGGIGNSVMAAAEANKGLVIGVDVDQSNESSTVITSAYKQLAVSVTKELKAIDDGTFPG GENIVLGAKDDSVGLPMKTSKFEKFTQKEYDALYAKIKEGKITIKTNEDFKDPTQIKASK VKLDYIK >gi|312953956|gb|AENW01000058.1| GENE 123 133581 - 135185 177 534 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 278 509 12 229 318 72 25 1e-11 MRYQYRYYFHNAQQAYDWSETMEYIIEMCNITKEFPGIIANDDITLQLKKGEIHALLGEN GAGKSTLMSVLFGMYQPEKGCIKMNGEVVSINNPNDANRLGIGMVHQHFKLVHNFTVLEN IILGAEDVKNGLLTMVEARKKVVDLSEKYHLNVDVDAITSEITVGMQQRVEILKMLYRDN EILIFDEPTAVLTPQEIDELMGIMKDLTTEGKSILFITHKLNEIKAVADRCSVLRKGKYI GTIDVKDTSKEEMSEMMVGRKVNFNVEKQPAQPKDVMLDVRNLSVAKKGHQDVVKNVSFQ VHEGEIVCIAGIDGNGQSELVYALSGLMDVKEGSIRLGEKDITKTSIRKRNLEGLGHIPE DRHRYGLVLDYPLSFNMVLKSYFTKKFSKHGFLKFADITRYSDQLIEKYDVRSGQGSRTT ARSMSGGNQQKAIIAREIENDPKLLLAVQPTRGLDVGAIEYIHSQLVKERDEGRAILLIS LELDEVMNLADRILVMYEGEIVAELDPKSTTIQELGLYMAGSKRGAEYEKAITE >gi|312953956|gb|AENW01000058.1| GENE 124 135163 - 136260 1502 365 aa, chain + ## HITS:1 COG:lin1427 KEGG:ns NR:ns ## COG: lin1427 COG4603 # Protein_GI_number: 16800495 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Listeria innocua # 19 353 14 345 350 198 40.0 1e-50 MKKLLQSDAFKNFGSSAIAILIGLLIGAVVIFISNSSEALDGLRTLLAGPVEDGMLGIGR VLYYAVPIIMTGLSVGFAFKTGLFNIGTPGQFIIGAFAAVYVGVKWTFLPGSIHWLVAIL AAFAAGGLWAVIPGVMKAYLNVNEVISSIMMNYIGMYLVNYSVSLVLFDALRNQSLPVAS TAVIPKMGFDKIFTGSPANGGFVIAILFVILIYIILNKTSFGYEMKACGFNKDASKYAGI NEKRNIILSMVIAGALAGVGGGLLYLSGSGKFIEVVDVLPAEGFNGIPVALLGLSNPIGV LFAGLFIAYLNVGGNAMQQFGFIPQIVDIIISCIIYCSALSLMIKVWLSKRRKTKELGTA KKEGE >gi|312953956|gb|AENW01000058.1| GENE 125 136264 - 137217 1045 317 aa, chain + ## HITS:1 COG:SP0848 KEGG:ns NR:ns ## COG: SP0848 COG1079 # Protein_GI_number: 15900735 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 6 316 9 318 318 224 43.0 1e-58 MDTIFFLVQQTWFFAIPLLVVALGGLFSERSGVINIALEGIMLIGALCGIGFIHIFNHAM PPQLLLLCAVLVAGAAGIVFSLFHAFAAIHMKADQVISGTALNTFAPAFCIFIARTFQQT QQIQFENVFRIESVPVLGSIPIIGDLLFKNTYITTYIGLLFLVLAWVIIYKTRFGLRLRA CGELPQAADSAGISVYKMRYAGTLISGFLAGIGGLIFVVPTSNVFNADVAGYGFLALAVL IFGQWKPFRIFFAALFFGFMKTVAATSSGIPFLAGLNIPPYIYKMVPYIATLIVLAFVSK NSAAPAAEGEPFDKGKR >gi|312953956|gb|AENW01000058.1| GENE 126 137335 - 138591 1468 418 aa, chain + ## HITS:1 COG:SA1121 KEGG:ns NR:ns ## COG: SA1121 COG0612 # Protein_GI_number: 15926861 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Staphylococcus aureus N315 # 7 409 9 417 421 178 28.0 2e-44 MQITNGVQLHFMKTEKFKDIGISIRFRSELEPKLAASRSLLALMLCDRCKTYDTKKKMSD YLDLLYGATLNAQTAGYGSAQIVEIRSKIINPCYVQGKQQLLESLFSFLQEVLFQPLLQE HVLEESRSILKAKIERMEDDPAQYAITQGLKLAGEGDYLGISALGDVKTLMQLTLDDVKA AYQRMLEKDVIDILICGAFDDTQMEQLVKAHLPFAARKQEIKTFYKVQNQLHDERKTEYR NITQSSIMMVWFTNTAINDPDYYALRVANAMFGQYSTSLLFQEVREKNSLCYSIYSNLIS YDAALGVTTGVEKEHIDKTISLIRKQFQRICEGDFASDLLEVSKQMIVNSLKASKDSMNS LIALQYQNVLLDRQWDTEDIIERIQAVKREDILHAMQACELKMTFVLTKEDADENNHE >gi|312953956|gb|AENW01000058.1| GENE 127 138572 - 139855 1395 427 aa, chain + ## HITS:1 COG:BH2392 KEGG:ns NR:ns ## COG: BH2392 COG0612 # Protein_GI_number: 15614955 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Bacillus halodurans # 1 407 1 409 432 236 34.0 8e-62 MKTITNKRYGESYVEETLENGLHVVLWQKPDYEKSLFMMATPLGAMDMKQVDEQGKELHF PAGIAHFLEHKMFEMGDSDVMELFSRMGASVNAFTSYTETAYYFSTTSDVKEPLNLLLDF VQELDISEESVEKEKGIIIQELHMYKEMSDSRLLMETFSSLYQQHPLRYDIGGDDESVNS ITLQQLQDCYAMNYHPASMILVGVSKEDPKKLLALIKENQKKKTFASISSVRRLAYTEPE QPARDSFSFTMDVSVPKLSYACKLQGMEDVYARTKAEWCIKIMLDAVFSSLNPDFQQWLD EGIINDYVGSEVDLGKDYGMVMFYAETTKKEAFLAIVKEVLARISSADITQELLDQLKNR YFGQSVRSLNSFDDIAITYVRSYFDQADFFRLLDVLYEITLEDIQQVCAALQDAPGTLVE LLPENCS >gi|312953956|gb|AENW01000058.1| GENE 128 140058 - 140378 382 106 aa, chain + ## HITS:1 COG:lin0038 KEGG:ns NR:ns ## COG: lin0038 COG0629 # Protein_GI_number: 16799117 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Listeria innocua # 1 103 2 104 179 72 35.0 2e-13 MNVIAFVGELTELSEIRTSAAGNRFATMMIRVQRPFANSEGVYEYDNLNIMLWKGIAETA MAAAQVGDHVSVKGRMQSHTFEGQDGKLHRSYDLIAEHVSFIKKER >gi|312953956|gb|AENW01000058.1| GENE 129 140468 - 141070 682 200 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229543523|ref|ZP_04432583.1| ribosomal protein S4 [Bacillus coagulans 36D1] # 1 200 1 200 200 267 64 4e-70 MSRINGPVWKTSRRLGFSILETGEELQKRAYAPGQHGPTKRVKLTNYGQQLREKQKIRYM YGLNERQFYNTFIKASKMKGVTGDNFLGLLESRLDNLVYRMGFARTRRAARQLVNHGHIL VNGKKVDIPSFIAKPGMVVEIKEKSRDMKAINEALEATLNTVAFIDVDKDAKKGTYLRLP ERSELNSEFNELLVVEFYNR >gi|312953956|gb|AENW01000058.1| GENE 130 141606 - 143360 2044 584 aa, chain + ## HITS:1 COG:BH3205 KEGG:ns NR:ns ## COG: BH3205 COG4477 # Protein_GI_number: 15615767 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Negative regulator of septation ring formation # Organism: Bacillus halodurans # 20 571 4 556 561 118 19.0 4e-26 MENFINNVKNVVSLDVLIYIVIALVAIVILTIIMMVLRQKQARKQLDELELSYNSLKGIP LAFKLNKAVALSRVNEEMSQRVESCRTDFDNIQEQLKECSVTLAEADDLIYVHKAKAAKR RMEKLREQMAELEGVAKDVNQALDSILEQENEQRVHINKLKDDFRIIKRNINENRASFSQ SYEYLEMEIAAIEKMFSAFEEWMFASEFNKAADQQKEIRESVAHLKELVDVLPSMYERAR GVLPRAIDEVGYQYAQAKNKGVYTEHLEVRKNLDIISDMLKNDLNKLRNGNPKDVHEDLN DCEKRISQLAEQLSREEAAFDEVSDNVDILFDTIRSINMDVEAIEELYNRVYERFGFENW TQRLQEVHERLSVLNDMQRKLEAVIAQNKVPYSTILIAYKELEQSAAAFTNEVGEMKQKL DNACSDEERAKKQLIKLQLIVNEIRVKMSKHRLPSVSQKYEDDLHKGEIMIKDIQVILDN SPLDVKRLNAELRSAIDYIYTLYNSVNNLVGMAIMVENTIVFGNRYRSSFPDIDSELTRA ELCFRNGQYTKALKIGIQCIEKMHPGAYEKLINKKDPSILNAGE >gi|312953956|gb|AENW01000058.1| GENE 131 143362 - 144492 1011 376 aa, chain + ## HITS:1 COG:BS_nifZ KEGG:ns NR:ns ## COG: BS_nifZ COG1104 # Protein_GI_number: 16080011 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Bacillus subtilis # 1 367 1 370 381 278 42.0 2e-74 MIYLDYASTTPICPEILKTYTRLLEKHYGNSDSLHELGRETGKLMEQSRAQIAQLLHVYK DEILFTSCASESNNAAIKGAAWKYANRGKHLITTCVEHSSIHNAMEQLQEVFGYEVTYLP VNAKGCVEVEDLKQALRKDTVLVSMMMVNNETGAVNAIRECAQYVHANSRALFHMDGVQA LGKLEVDLSCVDLATFSAHKIYGLKGSAILYKKRNVELVPLISGGQQENGLRAGTSNAPT NIVFAKTLRLAMEQREDAYAHVQKLNSYLRKVLSAMEDIVINSPEEGSPFILNISNLRIG SEIMLNALNAKGFAVSAQSTCSSHSKAVSAVLLAMGLGEQRATHAIRISLSHLTTREEVD AFLQALKEINHDYRTK >gi|312953956|gb|AENW01000058.1| GENE 132 144473 - 145681 1290 402 aa, chain + ## HITS:1 COG:lin1634 KEGG:ns NR:ns ## COG: lin1634 COG0301 # Protein_GI_number: 16800702 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Listeria innocua # 10 391 3 387 403 388 49.0 1e-107 MTIEQNNIVYNHILVRFGELSTKGKNKKDFIKRLLTNVKNALRDYDRLSYERTHDRLYIM LNGEDPHAVSEHLQKVFGISSFSFAIRVDSDIEAMKQTALQVAKESDARTFKIEARRSHK LFPMISDEINRAVAGEILRNTELKVNVREPQLRIQIEVHQEDTYIMTGRIAGAGGYPVGV GGKALVMLSGGIDSPVASYLTMKRGVAIECVHYASPPYTSQAAQDKVLELARQLAPYQGH IRVHVVPFTDLQLAIYKNCDESYAITIMRRMMYRIAQRLCEQQHCLAIVNGESIGQVASQ TLESMQTINCVTTTPVIRPVACMDKVEIINVSRAIDTYDISIQPFEDCCTIFTPKNPVTK PTIQRSERLEARFDYVSLLQECIEKTEHVDVYPKAKLDEDIF >gi|312953956|gb|AENW01000058.1| GENE 133 145801 - 145971 217 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPALTILILVVVALVLVVSLGVALVVVIEVVFEILRRMLFVVFILMISLFSFNVST >gi|312953956|gb|AENW01000058.1| GENE 134 146017 - 146559 739 180 aa, chain - ## HITS:1 COG:MA3441 KEGG:ns NR:ns ## COG: MA3441 COG0778 # Protein_GI_number: 20092253 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanosarcina acetivorans str.C2A # 1 172 6 165 174 78 31.0 8e-15 MEFNEVAVTRKSIRKYAARPVAKEDIEAMLRCAMEAPSWKNSQTARYHVITSSTMLQAMK QEGLAPFNAENTKDAPVLIVTSFVKDVAGFDKDGTPSNELGNLWGAYDLGLHNENLLLKA RDLGLDTLVMGIRDAKAIQRLLNIPETEIIVSVISVGYKAMDPEKPKRKKLDDIVTYYET >gi|312953956|gb|AENW01000058.1| GENE 135 146672 - 147490 845 272 aa, chain + ## HITS:1 COG:ECs2532 KEGG:ns NR:ns ## COG: ECs2532 COG0500 # Protein_GI_number: 15831786 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 4 259 5 267 269 161 35.0 1e-39 MLLCPKCGNKLVREERVWRCQNNHSYDIAKRGYVNLALHHKALSGDDREMVKARTRFLSH GYYAPLQAALVELVRGYHPSVVIDAGCGEGYYTNRVKQETDTLLGFDLSKYAVDEACKAR SGAVYAVASVFHMPLCDACSDMVLSVFAPFQAEEFLRVLQPGGIFIKVGPGPQHLMGLKE ILYDVPYENPSETLQQEGFILEKTQTVEAAICIRDAADIQALFHMTPYYWKTPKDAAMRL QELDELKTKIQFQIEIYRKDENMLNKQEQAML >gi|312953956|gb|AENW01000058.1| GENE 136 147528 - 148940 1584 470 aa, chain + ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 433 1 433 451 444 55.0 1e-124 MAFESLSERLGKAFKNITGKGKLSEKNMNDMLREVRMSLLEADVNYGVVKDFIARVKEQA LGTEVMTSLNPGQMVVKIVHDEIVALLGSEDAPVNYKSSGITTVMMVGLQGTGKTTASAK IANVMKKKQSRKPLLVACDVIRPAAIEQLKTLGESIGVEVFSLGVETKALETAKQSMDYA KENGYDTVLFDTAGRLHIDEELMQELSDIKAFVHPDDILLTVDAMTGQDIVNVAGSFHEQ LEVTGLVLTKLDGDSRGGGILSVRSITQVPVKFVGLGEKIDDLDVFHPDRMADRILGMGD IMSLVEQAQDKMDIEASTKSANRMMSGQFTLTDMLVQFQQLEKMGSLGGMMKLIPGMNQL AGQIDEAKAGNKMKKSTAIIQSMTMEERENPNILRASRKNRIAKGSGTTVADVNRLLNEY EKMKQVMKQMGAMTKSGKMPNMGGMGAMGAMKNMRSMNKMMRQGGKRGKR >gi|312953956|gb|AENW01000058.1| GENE 137 149096 - 150076 1022 326 aa, chain + ## HITS:1 COG:CAC1543 KEGG:ns NR:ns ## COG: CAC1543 COG1052 # Protein_GI_number: 15894821 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 1 325 1 325 326 341 47.0 1e-93 MKVFVYGYRKEEAAYFSACAKAMQLEIGTCAQRPTLENAQLCQGYECISVLSTPIDAALL QKLQEVGVRFLSTRTVGYDHIDLAYARKIGIHIGNATYASESVADYTIMLILMALRKMKL ILQSAVSQDYSFDAVLGSNLKGKTLGVIGTGAIGQTLIRHIAGFGCRILAYNPHPRKEME QYVTYVDLNTLYQNSDIITLHVPLNDATYHLLNEAAFARMKPGVIIVNTARGPLIDNTAL IAAIESGKVGAAALDVVEGETGIYYNRRKGKILKQHDMAVLNSFPNVLLTPHLAFLTDDS YRDMVTHSMKSCYLFMHGEENPWLIQ >gi|312953956|gb|AENW01000058.1| GENE 138 150539 - 150766 153 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154483461|ref|ZP_02025909.1| ## NR: gi|154483461|ref|ZP_02025909.1| hypothetical protein EUBVEN_01165 [Eubacterium ventriosum ATCC 27560] # 2 69 3 69 170 62 45.0 7e-09 MRTYADMTFEEVMEAFADTVTRLAYLRMGNEQDAKDIFQNVFLKLYTQTMEFHDPQHVKP LLRWRMYRNAMSCMS >gi|312953956|gb|AENW01000058.1| GENE 139 150727 - 150936 235 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400386|ref|ZP_06644532.1| ## NR: gi|293400386|ref|ZP_06644532.1| RNA polymerase sigma factor, sigma-70 family [Erysipelotrichaceae bacterium 5_2_54FAA] # 13 67 103 157 159 68 49.0 2e-10 MEDVQERNELYELMELVPNHRNALYLYYYEGYSIREISRLMNARENTVKSWMRRGKQELR SLLGGEEDA >gi|312953956|gb|AENW01000058.1| GENE 140 151153 - 151368 151 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQVKEDPVSVQALNGITYLDADCRYYVKLPEEKIAGEDTLTVYEKGRIVEDAVPKKSLEL QLPVENSTVTV >gi|312953956|gb|AENW01000058.1| GENE 141 151471 - 152232 576 253 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVIEYVQDTFQNAYLVNPETADVQSIGDLSYHAEAESGMHIYANTVQSSASGRFLLYRT YALAQGWAKEKTEAQWVLLDRVENTRRRLDTKRLPGYLLGNELRMAGDTHIITTKSYAVD ATTEANYPIVYNYRKNTWTEYSDYQCAVPFVSDYLYRARDSSIELLNIRTQEKHSIPLPK NMRAEDCILYPYDGFYISESTLSSALDIYIVSQQRWVHLDAKILNGETAVLFAYPLDDHT LLLNQTYLIEFHK >gi|312953956|gb|AENW01000058.1| GENE 142 152450 - 153319 762 289 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160914471|ref|ZP_02076686.1| ## NR: gi|160914471|ref|ZP_02076686.1| hypothetical protein EUBDOL_00475 [Eubacterium dolichum DSM 3991] # 17 284 1 268 271 173 35.0 1e-41 MKTEICKEQYAASMTAMPASSKEQNRSLKRGLSRQELSLQQCYVMIRKEQVVARAVIYDE HSYIGNLTLEAIEQTEADQFVRDVIGHLDRSREWRIDLYSDKINYTLVYRALKRWFPIEI KRESYTVMTAERDLHSYEFVSAKQMTKENLLELMVSASRTTPDLLLQREHTSMGLYPAVQ KQMEELLDDEESDILFQILLVEGQPAGFISVNRLLDDVGGIGCIGVHADYQGKRLGSVLL QKAMDMAWHHDIHKLIGDIDVHNIAIRKNLIQCGFMLDCRMCMFLLEKQ >gi|312953956|gb|AENW01000058.1| GENE 143 153934 - 156612 1803 892 aa, chain + ## HITS:1 COG:CAC2367 KEGG:ns NR:ns ## COG: CAC2367 COG5492 # Protein_GI_number: 15895634 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 415 630 132 348 752 74 29.0 1e-12 MKRCVHAVKLAMTVMLSAFLFLSVQDLGYIHAADKKIVLLKLASKENYDTIQAAIDAVAA GEDAIIQIPAGTYSEPLKISNTSSRTIILKGASADVSAYSNGGVRSSEETILTGGIEVNG LLEDDSLEINGLTLHGKGINIVGWGTPIKSSGSIRIVNNVITNITDKSISAIHINCGSDE YIDTVELKNNYIDNIGEEGYAANGVYSTLPVRAMYISGNYIGNVNHTAIQLGSMTVKELL SITENHILNWNKDGIAGTGAQGSQGDGIYLPKGSTPETVPVQVNHNYIAREKELPGSAGF ATRCNLKKGAIDLSANYWNEVYPYKVISGGTYANVTVKSVCDEHMNVTQQSIGDFRFSIS TLYNSGTDKEKMLSATIVMLDQDFDKPAVQWSSADERIIAVEQRQDAAYYVAKKSGTAKI SGKITDPKSGVIYTQEAEGKVIDIDVDNVVMEPGSLKQLQISVLPEGESIYYNKIEWTSS DESIVEVDSNGCLSSKDKKGNAEVTVTMYGFGTKLYAQKTITVTVEKPNPVQKINMQKNL LMKKGDTHTLQAEILPADADSQKIIWTSSNEDVAVVHADGSISAVANGTSTITATIDHVT ATCDVSVYEVKEANIEPLDPSRPSSTSQAGIMDEKSQDIIESTVDNILSEIAEGREIASD VLDETTRTAVLQAMNEGKAIQLTANAEVLGEEEIDAADLRIIQEYLSNITDAQHSALQYF DFSFHLVSDDGALLGEIKQLKQPISYAVVLPKGTAQQDTSYYMVRLHNGNITKIPLHTNA DGTMTFSTDQFSLYALVAEKKVDAGNEPIEKPKQPHEQPEEPKQPNTQPEHPVTDAKQPS STHEKTEKPVKKKVAAVSTADMQNEALWLSAAALAVLLMAVMLRKKHKKGAE >gi|312953956|gb|AENW01000058.1| GENE 144 156938 - 157210 358 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227518885|ref|ZP_03948934.1| ribosomal protein S16 [Enterococcus faecalis TX0104] # 1 90 7 96 97 142 74 1e-32 MAVKLRLKRMGSKRKPFYRIVAADSRAPRDGRFIEIIGTYNPTTNPASVVLNEELATKWL KEGAQPSDTVRNILSKEGIMKRLHEEKNAK >gi|312953956|gb|AENW01000058.1| GENE 145 157217 - 157465 294 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915186|ref|ZP_02077399.1| ## NR: gi|160915186|ref|ZP_02077399.1| hypothetical protein EUBDOL_01194 [Eubacterium dolichum DSM 3991] # 1 82 1 82 82 124 90.0 2e-27 MIDYEKVLLDLVTPMVEDKTNVSVKMMPTLEDNEILLYVYANSDDVARLIGRRGMMASSI RQMMSVASRKEDKRVTIKFESY >gi|312953956|gb|AENW01000058.1| GENE 146 157502 - 158005 847 167 aa, chain + ## HITS:1 COG:lin1907 KEGG:ns NR:ns ## COG: lin1907 COG0806 # Protein_GI_number: 16800973 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Listeria innocua # 2 167 3 171 172 108 40.0 6e-24 MKEINIGMLVNTHGLRGEMKVKVLTDFPQLRFQKGAVVHLQLAQGQFDLKVQHVRESKGQ LLVKFEGYDDINQVEGWKGSMLTIREEELQELDEFEAYFHELQDAVVYDMEGVQLGTVSE IIETGANAILRVKTKDKDILIPFVRAFVKEFDRKNKVMKVELMEGLV >gi|312953956|gb|AENW01000058.1| GENE 147 158002 - 158739 645 245 aa, chain + ## HITS:1 COG:BH2479 KEGG:ns NR:ns ## COG: BH2479 COG0336 # Protein_GI_number: 15615042 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Bacillus halodurans # 1 242 1 246 246 257 53.0 1e-68 MKITVLTLFPEFFDSFRSTSIIKRALEQRLVEFETVDFRAFTLDRHNHVDDTPCGGGQGM VLSCQPIVDCLKSVRSEDSFVIMMTPQGNRFDQKLAHRFASEIKHLIILCGHYEGFDERI RSFVDMEVSLGDFVLTGGEGAALVISDAVIRLLDHVIKEESHSDDSFENGLLEYPQFTRP IEYEGMRVPDVLLSGHHANIRKWRLKESLKKTMEKRPDLLKNREFTKEERKLLDEIKAEK EQGEG >gi|312953956|gb|AENW01000058.1| GENE 148 159092 - 159679 520 195 aa, chain + ## HITS:1 COG:MA2265 KEGG:ns NR:ns ## COG: MA2265 COG1573 # Protein_GI_number: 20091103 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Methanosarcina acetivorans str.C2A # 31 183 1 159 165 104 38.0 1e-22 MNMKSYLEQYSHTALAMNDIEILPEHIRVVMVNECAPLRNEDDFYGNTDGEYAVSLRSFF SDSEPAHLLARGIYVTNACKLPKPREGFTKQQLQESSVILEEELKLFENLRVIMLMGDVA IRVHTMIARRNHTARIPAGSTYRLRSSIWMDGDIRLFPSYIMTGKNLQIERSKRTMIAED ISQMLAYLETLDSAG >gi|312953956|gb|AENW01000058.1| GENE 149 159949 - 160296 405 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167756888|ref|ZP_02429015.1| hypothetical protein CLORAM_02437 [Clostridium ramosum DSM 1402] # 1 115 1 115 116 160 66 5e-38 MNMQLVNEVTKSQLKKDVPFFKSGSTVRVHVKIKEGDKSRIQVFEGLVIAKQGGGINEVF TVRKISNQIGVERTFPIHSPIVEKIEVVRNGKVRRNKLFYLRGRSGKASRIKEVR >gi|312953956|gb|AENW01000058.1| GENE 150 160352 - 160954 805 200 aa, chain + ## HITS:1 COG:BS_sipT KEGG:ns NR:ns ## COG: BS_sipT COG0681 # Protein_GI_number: 16078505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 30 197 25 190 193 115 38.0 4e-26 MQKQEKDRHRLEEHESLAGVIFSNLFSLLKIFLVCFVLVYLTANYLVRPLRVQGGSMYPT LKTGEFGFGNAFSGHFQEIKRGDIVIVYDKKKTHTYWVKRVIGLPGERIRASGDTVYIND TAIQEPYLDNDYADSIRLTENYKFTEDFDEVQLGEDEYYLMGDNRYASKDSREMGAFKRG DIKAVDFFIVLPFNKMRVAE >gi|312953956|gb|AENW01000058.1| GENE 151 160958 - 161551 682 197 aa, chain + ## HITS:1 COG:BS_sipT KEGG:ns NR:ns ## COG: BS_sipT COG0681 # Protein_GI_number: 16078505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 16 191 19 190 193 127 40.0 1e-29 MNKNKRTRSNLDIVYTILDFARLILITVVAAMVILVFVARKEEVRGTSMYPTLVEGESVI INMAANYVGEIKRFDVVVAREYRSDDLWVKRVIGLPGETISYREDVLYVDGKAMEEPFLD KKYVEQVKKSANKLYFTQDYTSKKLGKNEYLLVGDNRNESLDSRNDAVGPFQREQIIARG VFVYQPFSKARYVGNGG >gi|312953956|gb|AENW01000058.1| GENE 152 161541 - 162407 1112 288 aa, chain + ## HITS:1 COG:BS_ylqF KEGG:ns NR:ns ## COG: BS_ylqF COG1161 # Protein_GI_number: 16078668 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus subtilis # 8 283 3 280 282 279 49.0 4e-75 MADDKIRIQWFPGHMTKAKREMQEKLNMVDMVIELRDARIPSASKNPMIEELCQNKPRLI VLSKKDKADAAATKLWCSALQNETTRVVALDILKENIIPGIVEESRLLMQAKIERMKRRG IRPRAIRAMVVGVPNVGKSTFINRISKKKVAVTGDRPGVTRALQWSKVNQNLELLDTPGV LWPKFEDETVGVLLAITGAIRDEILPLEEIAAWAMRYLIANKKEALQQRYEIAVCEDPYI MLERIAEKRGFMRKGEMDEKRTIEAFLRELRDDKLGRITWEMPYADSE >gi|312953956|gb|AENW01000058.1| GENE 153 162391 - 163014 607 207 aa, chain + ## HITS:1 COG:BS_rnh KEGG:ns NR:ns ## COG: BS_rnh COG0164 # Protein_GI_number: 16078669 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Bacillus subtilis # 7 201 62 255 255 169 47.0 4e-42 MQTANEYEQVWWQQGKRCIVGIDEAGRGPIAGPLVVAAVAFPPGYSHPEIYDSKKLSDKK RRALFHEVVAQALEYHIRIIEPKIIDELNIYRATQRAMQDISDMFAHADGVLTDAMPLPH NERDVISLVKGDQKSVSIAAASILAKVTRDCMMEAYDRQYPQYGFARHKGYPTKAHIEAL HTYGVITGLYRESYGPVAAMRQLVLDI >gi|312953956|gb|AENW01000058.1| GENE 154 163144 - 163521 435 125 aa, chain + ## HITS:1 COG:no KEGG:ACL_0835 NR:ns ## KEGG: ACL_0835 # Name: not_defined # Def: hypothetical protein # Organism: A.laidlawii # Pathway: not_defined # 3 120 4 123 124 63 31.0 2e-09 MFTWVKGNVYTLVLTLYPNNITLNSSAASYFEDVRWAMIGLDKDSLKLGIRPVTKREIDL HLVSMDQLHKVSVGKGYARISNKMIIEEISGMINQPINGLKINAAYDETENMLIADLHEL AADKG >gi|312953956|gb|AENW01000058.1| GENE 155 163529 - 163960 530 143 aa, chain + ## HITS:1 COG:TM0865 KEGG:ns NR:ns ## COG: TM0865 COG1585 # Protein_GI_number: 15643628 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Thermotoga maritima # 3 140 5 140 140 60 32.0 1e-09 MVLIWIAISVGAVLVELATPTALISIWFAVGGVIGALTALINLPLWVQIVCFVVVSLASM LIVRPIASRYLRGNTVPTNADRFIGEIAQVTSLVTKDEWGEVKVNGTMWHAVPVDDDSIE EGAKVKVVAIEGAKLLVKRVSER >gi|312953956|gb|AENW01000058.1| GENE 156 163983 - 164927 1364 314 aa, chain + ## HITS:1 COG:FN1549 KEGG:ns NR:ns ## COG: FN1549 COG0330 # Protein_GI_number: 19704881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Fusobacterium nucleatum # 4 295 6 293 294 324 59.0 2e-88 MSVFQIILLVVVALILVGLFAYLIRIVPQAKAYVVERLGAYHTTWNTGIHILVPFVDRVS NKVTLKEVVKDFAPQPVITKDNVTMQIDTVVYFQITDPKLYTYGVVGPITAIENLTATTL RNIIGDLELDETLTSRDIINTKMRAILDEATDPWGIKVNRVEVKNIIPPRDIQEAMEKQM RAERERRESILRAEGEKRSNILTAEGEKEAMVLRANAKKEAMIAEAEGQARAMERIYEAQ ARGIEMIKNANPTKEYLSLKSLETYEKMADGKATKIVVPSEMQNMASFLTSAREILVDDA AKDALEEVIKPKKG >gi|312953956|gb|AENW01000058.1| GENE 157 165042 - 165773 765 243 aa, chain + ## HITS:1 COG:SPy1163 KEGG:ns NR:ns ## COG: SPy1163 COG0758 # Protein_GI_number: 15675139 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Streptococcus pyogenes M1 GAS # 39 239 72 274 278 177 44.0 1e-44 MREQLLCYALRYEGDWKKMKLALDRQEPWTRMAYEGSYVTIADQAYPDKLRRLACPPWIL FYEGDMTLLQKPGCGIVGSRQASAAGLRNCARITDCMKERFVIVSGLARGIDGQAHRSAL DQHTIAVIGCGLDVVYPKEHASLYAVMRKKQLIISEYPNGTKPYAYHFPWRNRIIAALSE AVIVVEARRRSGSLLTVNEALELDIPVYCVPHAYLDEAGTGCNLLISQGANILVDEDDLR LIF >gi|312953956|gb|AENW01000058.1| GENE 158 165844 - 168090 2966 748 aa, chain + ## HITS:1 COG:L0298_1 KEGG:ns NR:ns ## COG: L0298_1 COG0550 # Protein_GI_number: 15673212 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Lactococcus lactis # 2 572 26 587 589 530 52.0 1e-150 MKNLVIVESPSKSKTIEKYLGGDYHVVSSKGHIRDLATSGKGGLGIDVENDFEPTYKVSS DKRAVVKELKDLAKKSDHVYLASDPDREGEAIAWHLANVLDLNMEEENRIIFNEITKHAV VEAFEHPRTIDQDLVKSQEARRMLDRIIGFKLSKLLQSKIKSKSAGRVQSVALRLIVERE NEIRAFKSEEYWTLAANIEKDGKMFSASLNKIDGKKADLKTQEEVNAVIERCCHDFIVSS IEKKVRKKEARMPFITSTLQQEASTKLGFGAKKTMQIAQKLYEGLPLAGGVSEGLISYMR TDSTRLSDQFVKDAESYIEETYGKDYKGRARQKNSENAQDAHEAIRPTSILNTPARVKEY LTNDQYKLYKLIYARTLASLMAPSKSNVVNVQIVSDGCEFSANGSILTFDGYLKIYSDYE TVKDEMLPIMEEQETLKDVELEGKQHFTEPPLRYSEARLIKDLEEKGIGRPSTYAIIIDT LQARGYVSLERPSEGSKTKVFIPSEQGELTDTKLQEFFSGIINVSYTANMEHHLDEIAAG ERNNIEEVRTFYNEFEPLLQNAYENMEKKELERTGEKCPDCGNDLVYRIGRFGKFISCIN FPECRYTKGEDEDENAVEEVCPKCGSKMVTKKGRYGSFLACSNYPECKYIKSNKTKEEPE PTGEMCPDCGHELVRRKSRFGTTFIGCSNYPKCRYIKKEPKKEKAEGDDKAAPKKKAAAK KTTKKVVKKAVKKSVKKAVEAEAEGSES >gi|312953956|gb|AENW01000058.1| GENE 159 168090 - 169385 1684 431 aa, chain + ## HITS:1 COG:BS_gid KEGG:ns NR:ns ## COG: BS_gid COG1206 # Protein_GI_number: 16078676 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Bacillus subtilis # 4 428 6 433 435 566 63.0 1e-161 MDKVTVVGAGLAGCEAAWQLVKRKIPVRLVEMRPKTSSPAHHSENFAELVCSNSLRSDSL NNAVGILKEEMRHLDSIIMESAKATRVPAGSALAVDRQAFSRRITEQLKQHPLIEVVQEE VTQIPDGPCIIASGPLTSDALSKAIQEYTHADYFHFYDAAAPIIEKDSIDFSKAYIKSRY DKGEAAYINCAMSREEFDAFYEELIHAETAQLHEFEDETYFEGCMPFEEMARRGRQTLLF GPMKPVGLERPDGTTPYAVVQLRQDNAVASLYNIVGFQTHLKWGEQKRLLSMIPGLENVS IVRYGVMHRNSYLCAPKVLRPTYQHVQRDDLFFAGQLCGVEGYVESAASGLLAGMNMANL MREKAVVELPNTCVIGSMAHYITHASERYFQPMNANFGIMRLLEKVKKKERKEAFANQAL SVIDTYKKEFD >gi|312953956|gb|AENW01000058.1| GENE 160 169385 - 170293 919 302 aa, chain + ## HITS:1 COG:BH2465 KEGG:ns NR:ns ## COG: BH2465 COG4974 # Protein_GI_number: 15615028 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Bacillus halodurans # 2 299 6 303 303 240 42.0 2e-63 MEELLARFLQYMDSLNSGSVHTRAAYQRDIREFISFLQEEGIEELQDADRIIVMNYIASL REKPGVSGEMKNSTIARKLSSLRSFYRYLNEYVGITQNPFLYFKTPKRAKRIPEFLFYDE MDTFLSSFDLDTPDGLRDRAMFELMYACGLRVSEAASLRLYDIDLHDRILTIHGKGNKQR IVPFYALAGELLEHYLQEVRPQWMKEEHDIVFINQRGKGLTTRGIQYRMQLAADTCSLSV HVHPHMFRHSFATHLLDNGADLRVVQELLGHASLSTTQVYVHVTQERLKKAYTHAHPRAQ EK >gi|312953956|gb|AENW01000058.1| GENE 161 170265 - 170474 166 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHTRVHKKSKKTIEKNNECDIINNGANTHTTHIMDSAARASRRSVCVNDKLLPRGSDGGV TESEDISCQ >gi|312953956|gb|AENW01000058.1| GENE 162 170465 - 171418 901 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237734605|ref|ZP_04565086.1| 30S ribosomal protein S2 [Mollicutes bacterium D7] # 6 280 1 275 282 351 62 1e-95 MSVVTMRKLLESGVHFGHQTRRWNPKMKPNIYASRNGVYIINLEKTLEQLDTAYAAMKDI AEKGGKVLFVGTKKQAQAVVVEEALRSGSFFVNQRWLGGLLTNYRTIQKRVKRLVEIEEM EANGTLDLYPKKEIAQVKKQKARLENFLGGIKEMKKLPNAIFVIDPKEEHNAVAEAKKLG IPVFAMVDTNCDPETVDYPIASNDDAIRSVKLITTLMADAIVEAKGGLLSVAHNIDENEN DVTMKDVIINVEEQIAENERRRRQRNEERRNRRPYDRNRNGRNAKAPYQRRENVRPAADS RPANNDSARSEAPKTAE >gi|312953956|gb|AENW01000058.1| GENE 163 171455 - 172342 549 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 2 288 4 275 283 216 43 9e-55 MITAALVKELREKTGAGMMDCKKALTECDGDIAKSIDWLREKGIAKAAKKNDRIAAEGLT RVGVEGNTGVIFEVNSETDFVAKNEQFLELLETVKNALIANKPADLDAALACTVNGETIA DLVTTATATIGEKISLRRMAVVEKADDEVFASYMHMGGKISALAVLKGADEKVAKDMAMQ IASMNPQYVSRDDMPVEVVEHERKVQTEIVKNDEKLASKPEKVLAGIIEGKVSKNLKDAC LVEQEFFLNPDQKVGQYLKEHASTVASFIRYAVGEGIEKREDNFAEEVMSQAFGK >gi|312953956|gb|AENW01000058.1| GENE 164 172541 - 173254 1005 237 aa, chain + ## HITS:1 COG:L70624 KEGG:ns NR:ns ## COG: L70624 COG0528 # Protein_GI_number: 15673992 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Lactococcus lactis # 2 232 6 237 238 293 67.0 1e-79 MYKRVLLKLSGEALSSPGNSFDPKILASLAKELKQVHELGVDLAIVVGGGNFIRGKMAET MGIERVQADYMGMLATVINALAVQSALEQEGVPTRVQTAIEMQKVAEPFIVRRANRHLEK SRVVIFGAGTGNPYFSTDTTAALRASEIGADVILMAKNGVDGVYNADPKTNPDAVKYDTL TYMDLIQEGLAVMDTTATSMCMDNDIDLVVFNMNEHGNILKAVQGDITGTVITKERK >gi|312953956|gb|AENW01000058.1| GENE 165 173259 - 173801 738 180 aa, chain + ## HITS:1 COG:BH2424 KEGG:ns NR:ns ## COG: BH2424 COG0233 # Protein_GI_number: 15614987 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Bacillus halodurans # 2 180 4 185 185 154 52.0 9e-38 MEILNHAEEKMKKAVAVLEEDLKTIRTGIAHASLLDHVQFEYYGSPTPINQVASVKVVEG RQLVIKPYDRGTLKDIERAIQTSDTGLVPQSDGEVIRLNVPALTEERRKELAKSAHKMGE EAKIAIRNIRRDANDAVKKDKELTEDLKKDAQEKIQKLTDKIGKSIDSAVDTKAKEIMKV >gi|312953956|gb|AENW01000058.1| GENE 166 173973 - 174677 820 234 aa, chain + ## HITS:1 COG:SPy1965 KEGG:ns NR:ns ## COG: SPy1965 COG0020 # Protein_GI_number: 15675763 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Streptococcus pyogenes M1 GAS # 6 232 16 247 249 266 53.0 2e-71 MDTRIIPQHIAIIMDGNGRWAKKRGLPRTAGHKQGAENIRKIAIACNTMGVKALTCYAFS TENWKRPQDEVDYLCKLPKLFFNRYLAELKKNNIKVTFLGEIERFPDETRRVITTAVEQT QENTGLILCLAVNYGSRREITLAAQRYAQDVQQGKVSPEIDEDAFGSYMMTADMPELDLM IRTSGELRISNFLLWQLAYAELIFTPVAWPDFSQEELNRAIDEFNHRNRRFGGL >gi|312953956|gb|AENW01000058.1| GENE 167 174679 - 175452 837 257 aa, chain + ## HITS:1 COG:lin1353 KEGG:ns NR:ns ## COG: lin1353 COG0575 # Protein_GI_number: 16800421 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Listeria innocua # 1 243 1 251 262 109 33.0 4e-24 MKTRIITALLIILCVVPPLVYGGWLIDLLIAFIIVAGGIELLNLKEQDAKWPLGIKTLAI VAVFVLVLSDERLHVALLGVSALIFLSIPVFTDRFHAKDGFLCIAYVTFFFAIARCFLHI YGTNRMYVWFIIIATYACDTAAYFCGRFLGKHKLNVRISPKKTWEGSIGGWLFGALLSFA FAWFMIDTMTPLQMMIASAILTVTGQIGDLAFSAIKRNFGIKDFSDLLPGHGGVLDRVDS LVFNFICFDLILVVLML >gi|312953956|gb|AENW01000058.1| GENE 168 175449 - 176615 1360 388 aa, chain + ## HITS:1 COG:lin1354 KEGG:ns NR:ns ## COG: lin1354 COG0743 # Protein_GI_number: 16800422 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Listeria innocua # 1 377 1 376 380 372 49.0 1e-103 MKKIMLLGASGSIGTQTLDVVKHHSSEFEIIGLSVGYNMKKLAEILDALPKVRQVCVAQE ADMEDMQKRYPSHSFCFGDAGLKQLAANPDYDVLVNAVVGFRGLVPTLTAIEHDKTVALA NKESLVAGGPLVKRALKEHPVALYPIDSEHSAIFQCLQGNALKEVDKLIITASGGSFRDR SRAELADVTVKEALQHPNWDMGGRITIDSATMMNKGFEVIEAHYLFDIPYDAIDVVIHRE SIIHSMVQYHDHAIMAQLGTADMRLPIQYALSYPSRLEMKNAEPFDFQRTFALHFTPASE ERYPLLKLAFAVGRIEGNLGAVMNGADEEAVALFLDGKIGFLDIERYIIKAVEAAAYIAH PSLEEVIESDAWAREFVHRAWKGGMCTV >gi|312953956|gb|AENW01000058.1| GENE 169 176612 - 177670 1342 352 aa, chain + ## HITS:1 COG:AGc2553 KEGG:ns NR:ns ## COG: AGc2553 COG0750 # Protein_GI_number: 15888706 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 351 47 407 409 185 33.0 1e-46 MSNIVNIIYFILILSVIIIVHELGHLIAAKRFGVYCKEFSIGMGPVVYQKQVGETAWSIR ALPIGGFVAMAGEEDDDEAEELDIPYERTLNGIKPWKQIVVMAAGAVMNVLLAWVLFIGI TAYQGAVSVPGKALVASVQENSAAEKGGMKAGDEIIRVKNGNEVLEPKTFNDVVEFIQYY NGDTEFTVLRDGKQVTLHFTPTYVKDESKYILGVLQQNEIKEISLLESIPYGTEKMVDSV TTIFESLGKLVQGVGLKNLSGPVGIYQVTAQITQTGLLSTIALIGLLSVNVGIFNLLPIP ILDGGRIFIVLIETLIGRKLNERIQSAIMMAGLLMIVGIMVLATWNDISRLF >gi|312953956|gb|AENW01000058.1| GENE 170 177918 - 178406 314 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGACWTAPVRAESERGSEMDSFAYTRNYDNIALFDKHTRRFTFILGDGGIYSYDAIKKA RKSLEYVGTPLENAFANIGRIGPGNAFSSGSEKVQVRVKLFFTDGTFTYGYVSKETVQKG SLQYHKEIAKAEKVVKVLNTIARKNRKEDANQDFLIKIRRIK >gi|312953956|gb|AENW01000058.1| GENE 171 178511 - 179638 1142 375 aa, chain - ## HITS:1 COG:SPy0210 KEGG:ns NR:ns ## COG: SPy0210 COG5279 # Protein_GI_number: 15674407 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain # Organism: Streptococcus pyogenes M1 GAS # 2 366 7 400 410 80 23.0 5e-15 MKRYGIILLTSLILLGCSATQKAEEKEQKDPAVELKQTSIQNSKAINEDTCYKYQRSLLH ENLQDDYDRLYGALLHHESSVLLDCSMPYVMKLFDAVTFDHPELFWSNYEYNYKESDDKE SVTLYPSYAYDQEETANLQKQVDAVAAEILQKAEAKQTDYERVKLLYDWIIDRSDYVNKE ENNQNMLSVLLDKKAVCAGYSKSFKYLLDQLHIPNAIILVQVIENPEEYHVINMVQMDKQ WYYLDPTFGDIKIEKSYNNYRYAYFAMTSAEVENIYAPQQVIKQTAAYKDSFFYQRDAYL KGYDENQIIAIIASNINNPDPCLAIKCDSRQTYEQVKQLLRSQHIFDLFQSAGYNPQEFE YYSLDENYCFFLNYW >gi|312953956|gb|AENW01000058.1| GENE 172 179709 - 179975 233 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167755666|ref|ZP_02427793.1| hypothetical protein CLORAM_01181 [Clostridium ramosum DSM 1402] # 1 86 1 86 86 94 54 4e-18 MPQIQSQKKRVKTNNKRNLAVSAQKSALRTSIKKVLAAVDAKDAAAAAAAYNEASSKLDK AVAKGIHHKNYATRQKSRLAKAINAIAA >gi|312953956|gb|AENW01000058.1| GENE 173 180080 - 180955 1266 291 aa, chain + ## HITS:1 COG:no KEGG:Thit_0885 NR:ns ## KEGG: Thit_0885 # Name: not_defined # Def: spore protease (EC:3.4.24.78) # Organism: T.italicus # Pathway: not_defined # 5 286 2 309 321 174 37.0 2e-42 MAEPYQIRSDFADEIISADIQSKTYEHIEKKNDYIRSNYIKVLCDENELGKHKGDYVSIE CRDLDDHVVRENMIDAIQENLQHMSDNMHVTLKKILVVGLGNRFITSDALGPQAANEILV TAHLYEHEDPAYLKGTRNVAVLQPGVMGQTGLESLSIVQSVAQSYQPDLVIAIDALATRN IARINRVVQINNTGIQPGSGVGNHRMSLCEKSLHIPVIAIGVATVTSIGAILHETLEVSG EEKQHILQKIQDSNYLNLVVTPKSMDDELKHLVYIVSESLNRFLHPNYEQL >gi|312953956|gb|AENW01000058.1| GENE 174 181036 - 181992 1254 318 aa, chain + ## HITS:1 COG:no KEGG:GWCH70_2443 NR:ns ## KEGG: GWCH70_2443 # Name: not_defined # Def: stage II sporulation protein P # Organism: Geobacillus_WCH70 # Pathway: not_defined # 110 309 158 378 399 104 31.0 4e-21 MKSTCKLLVKVFVLIAFLYLTPFASGLKHCFRNADDLLNNFVYKQKTINSSLSLKDSLNV LSYNSNLTIPKEDISEVETTQDNPSVVPKTTDEQKDTSQSKDDGKNNKAENSDKKTEEKS EDKKVKSTGKRVYIYDTHQDESYKGGKTVLDAAAILAQKLEDRGIKVVLETNDFIRYRDT HGLTYNESYVVSYKYLNEALVNYGGFDMCLDLHRDSIPREASYINIDGKNYAKGMFVVGG LGKNAKTATKLSTTLTDTINAKKNGIMKGVMTREAYYNQEVAKNIVLMELGGDVNTFEEV SNSLDVIADGIHDVLTKE >gi|312953956|gb|AENW01000058.1| GENE 175 181999 - 182295 394 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400537|ref|ZP_06644682.1| ## NR: gi|293400537|ref|ZP_06644682.1| hypothetical protein HMPREF0863_00822 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 98 1 96 96 82 44.0 7e-15 MKRFLADAILICILVSIGSYINQQGSDDTRNLVQEQVESFESDVAQNRVVKAQNDPVALK DIEENRASQLAKSSSEAIVSTMKGCVQMFSDVFDGLLH >gi|312953956|gb|AENW01000058.1| GENE 176 182411 - 183322 1169 303 aa, chain + ## HITS:1 COG:BH2508 KEGG:ns NR:ns ## COG: BH2508 COG0223 # Protein_GI_number: 15615071 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Bacillus halodurans # 1 297 6 305 317 278 47.0 1e-74 MGTPEIAVSMLERLWSDGYRIIGVVSQPDKKVGRKQVLQMPPVKQAALAHDIAVYQPIRI RDDYEELMQLDIDLIVTCAYGQFIPSKLLEHPTYGSVNVHASLLPKLRGGAPIHKAIIEG HAESGVSIMRMVKKMDAGAVMAQSHVTIEDEDTMGSLYDKLAVSGAQLLSESIPKIIDGS AVFVEQNEAEATFAYTIQKEEEHVDFRRDVESVYNHIRGLIPAPCAYVLVNGKKLKFHKV RRLSKKGSAACGEIIGMVDGGYAIACADGLILADELQLEGKAKMEAKVFFNGSGKNLIGC IVE >gi|312953956|gb|AENW01000058.1| GENE 177 183498 - 183659 140 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVRDYMNKIEVLNFYDELTNDQKQSFMMLMDTLGVLCEKRSREDNISVRESML >gi|312953956|gb|AENW01000058.1| GENE 178 183960 - 185768 2299 602 aa, chain + ## HITS:1 COG:BS_lepA KEGG:ns NR:ns ## COG: BS_lepA COG0481 # Protein_GI_number: 16079605 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Bacillus subtilis # 3 602 11 610 612 903 72.0 0 MDQKHIRNFSIIAHIDHGKSTLADRILEITDTVEQREMKEQLLDTMDLERERGITIKLNA VQLKYKAEDGQDYIFHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYL ALDNDLEIIPVINKIDLPSAQPDVVRKEIEDVIGLDTGDAPLISAKNGLNIKDVLEAVVR NVPAPSGDPHAPLQALVFDSLYDAYRGVIAYVRVKEGTLRVGDHIRFMASGAEYEVLEVG IRNPKEVKKDVLECGEVGWVCGSIKSIKDVRVGDTITHADHAANEPLHGYREMNPMVYCG LYPIDSSKYNDLRDALEKLQLNDASLQFEAETSQALGFGFRCGFLGLLHMDVIQERIERE YRIDLIATAPSVVYHAYLTDGSVLSIDNPSLLPDVQKIDHIEEPFVRASIMTPNDYVGPI MELCQRKRGNYKDMVYIDEGRMNVIYELPLGEIVFDFFDKLKSCTKGYASLDYELIGYQT NKLAKMDILLNGEIVDALSSIVHREFAYPRGRAICEKLKKLIPKQQFEIPIQAAINGKIV ARADIKSLRKNVLAKCYGGDISRKKKLLEKQKEGKKRMKSVGSVEVPQEAFMAVLSMDDD DK >gi|312953956|gb|AENW01000058.1| GENE 179 185859 - 186701 877 280 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915157|ref|ZP_02077370.1| ## NR: gi|160915157|ref|ZP_02077370.1| hypothetical protein EUBDOL_01165 [Eubacterium dolichum DSM 3991] # 3 278 2 280 284 110 32.0 1e-22 MFEETRKYTEEVYVSKEELAQRLDLTGVVLDAVWKQVEDYRALLRRSFCFDDLHADIVMT RALCAKLQQTTELLYRCPLQRPFSAAVQKSVLLAGNYPHWLYKAGELLALAPLPHGLVTF LEQEEEPLLLRIFFLSMFTGESAYLDCLLVHERCHAPFALAMEEQPNRTAAGDLSVRFLA FLDDIRLQISRSMLSLTETDVTACQTMQLQELLEQYPMLSEQQLMFYVDHRQPYRYYTIR QFMEYAGVCNETARCAMELLVKQHCYQRRKIGKKYVYYTV >gi|312953956|gb|AENW01000058.1| GENE 180 186711 - 187814 1002 367 aa, chain + ## HITS:1 COG:SP1409 KEGG:ns NR:ns ## COG: SP1409 COG0635 # Protein_GI_number: 15901263 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Streptococcus pneumoniae TIGR4 # 3 364 7 376 376 253 38.0 6e-67 MKAVYVHVPFCRDICAYCDFTRCRYHAGLADQWLIAVKRELQEKLAQVSVETVYIGGGTP SALNSRQLEQLLKLLAPYTTQVQEYTVEANVESLDEDKMKLLKRYGVNRISLGVQTLQPV LLSIIGRRHTREEVVERIRQLHQYGIHNISIDLIYGLPQQTMEMWQDDLQDIVQHFQISH ISLYALTIEEHSQFGRDGVENIDADVETDMYLYAVSYLKKHGFIQYEISNFAKPNAASLH NQMYWNYEDFCGIGCGASGKSGHIRYDNTRNLHTYLQKGSCPDIIELSRQDEMFEMLMMA LRMKKGMSLSLFRERFAADFETIYSAPLQKNIANGMLQVKDDHVRTTEEGMLLLHDVLVD FLSEETL >gi|312953956|gb|AENW01000058.1| GENE 181 187811 - 188839 1062 342 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0899 NR:ns ## KEGG: SSU05_0899 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_05ZYH33 # Pathway: not_defined # 10 325 23 337 347 119 27.0 2e-25 MKEAERKRKILYHQHLTSRCDAQTAARDVLALQAQFLRHAQMSLRLRTRDDSWKQWVKQS VKTRAFRGTLHLLDAEDRLLITSALWKDYEHRKYYMARYYTPQEEQLFCNAILDLLQQGI CGRRKIYTRLVAMGLDEKLCELACSSWDGLFAVLNIQGKVMFQHAASREFAYAPISLRSD LDACRKELVYRYLKGYGPVTLRDASYFFGWKKKELEAVLQKIHNVQMSDCNGSTVYELPE EIDAYPRIPTAVFLSGFDPLMLGYEKHENPFLPQRHLRRVFNLQGIVYPCFLYKGNVAGR WKLEKETLQLQPFEDFDALQRQQIEKAAKRLLQPARIIWADF >gi|312953956|gb|AENW01000058.1| GENE 182 188962 - 189228 332 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|220931633|ref|YP_002508541.1| ribosomal protein S15 [Halothermothrix orenii H 168] # 1 87 1 87 88 132 71 1e-29 MLLKSEKQAIMKEYARFEGDTGSPEVQVAVLTYRINQLTEHFKEHKHDYHSQRGLMKMVG RRRNLLAYLKNKDLNRYKELISRLGLRK >gi|312953956|gb|AENW01000058.1| GENE 183 189317 - 191494 1682 725 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 8 720 9 714 714 652 49 0.0 MAKQVFRLDFCGRGLTVETGEVAKQAGGAVLVRYDDTVVLSTATASKQAKEGIDFFPLTV LFEEKLYSVGKIPGGFLRREGRPSEHATLTARMIDRPIRPLFADGFRNEVQVVNTVLSVD QDCTPEMTAMFGASLALCVSDIPFNGPIAGVMVGRVDGEYIINPTPEQLEKSDINLTVAG TKYAVNMVESGAKEVSEEAMLGAIMFGHEHIKQLVAFQEEIAAAVGKEKMEVKLYTVDED IDREVRAQFEQAIRDAVSIEKKLERYGKIDELTEEAVAVFDAKEYENEAAKAKVLKQVKQ ICHSIEADEVRRLIIEDKVRPDGRKVDEIRPLDSQVDILPRAHGSALFTRGETQVLSVTT LGPMNDNQIIDDLTEVETKRFMHHYNFPPYSVGETGRMGSPGRREIGHGALGERALSQVL PSVEDFPYTIRTVAEVTESNGSSSQASICAGTMSLMAAGVPIKAPVAGIAMGLIMDEENG KYTVLTDIQGMEDHFGDMDFKVAGTSKGITALQMDIKVTGITREVFEEALAQAKVARAQI LENMMAAISEPREDVGTYAPKIEQFYIDPEKIREVIGPNGKMINKIIEASDDVKIDIEDD GHVVIYHMDRAAINHAADMIRDIVREAKVGDIYEGKVVRIEKFGAFVNLFPGTDGLLHIS KINHERVNKVEDVLNIGDTVRVKVTEIDDRGRVNVSAKALLPRPRTEKKEEDAKPAAAAE DNKEA >gi|312953956|gb|AENW01000058.1| GENE 184 191689 - 193080 1807 463 aa, chain + ## HITS:1 COG:lin1661 KEGG:ns NR:ns ## COG: lin1661 COG0624 # Protein_GI_number: 16800729 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 1 463 4 470 470 335 41.0 1e-91 MNWLTELETYKDAFIQDLRGLIAIPSVRDDKTKTANAPFGAGCRKALDYMLELGKREGFQ IKDYDGYAGVIAYGEGEESVGVLAHLDIVPIGEGWSRDPFGGDIVNGYMFGRGTLDDKGP AMAGFYALKMLKDKGIKLNRKVMLILGCDEESGMECMNYYTKHGELPTLGFTPDADFPVI YGEKGGLHVELSGTCDTVITSMHAGERSNIVIGQASAQVRDWKEEYLDAFLYYLRAFDLK GSVETLDNESAVLHMEGVFAHAAMPYNGVNAALHLLNFIGCTYGDKFAHDTYTMLKDWQG KPLGIDIDGAYMGFLTMNTGIVNIEHNEASIVIDIRYPNDADPKRIMKGFTDTAKKLDYA LDVTLKKNTKPLFVDPDSKLVQTLSSVYRDYTHDTFTPNMTIGGGTYAKKFDNFVAFGPE LPNREQPKDMFIGGCHQKDEAIRVEDLLRAVAIYTAAVEQLAK >gi|312953956|gb|AENW01000058.1| GENE 185 193099 - 193770 789 223 aa, chain + ## HITS:1 COG:BS_ytmQ KEGG:ns NR:ns ## COG: BS_ytmQ COG0220 # Protein_GI_number: 16080042 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Bacillus subtilis # 1 207 1 207 213 161 42.0 1e-39 MRMRKLPWAQDFLKEQEVVVPDASALAGAWKQTLKRAELHVEIGTGKGDYWVQMAQKYPD IAWVGVEKNINVAALAVRKYTQLEQQPDNMLYIQGDAEVIDTWFAQGEVDVIHLNFSDPW PKKRAHKKRLSNHAFIARYAHILKPDGEIQMKTDNSALFEYSLMEFQEEGWRLKEVSVDY RREEHAEDVITEYERRFLEKGQPIYRAVFVKNGKEKDAPFPEK >gi|312953956|gb|AENW01000058.1| GENE 186 193799 - 194128 473 109 aa, chain + ## HITS:1 COG:lin1650 KEGG:ns NR:ns ## COG: lin1650 COG0526 # Protein_GI_number: 16800718 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Listeria innocua # 5 107 1 102 103 121 59.0 3e-28 MKEYMTAIHSMEEFQEAAAKGGVSVFTFSANWCPDCRFIEPFMPKLVEAFSDYTFYYVDR DENIDICQALMVMGIPSFVAYKDGKESGRFVSKLRKTEKEINDFLAAQK >gi|312953956|gb|AENW01000058.1| GENE 187 194146 - 194859 994 237 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915063|ref|ZP_02077276.1| ## NR: gi|160915063|ref|ZP_02077276.1| hypothetical protein EUBDOL_01071 [Eubacterium dolichum DSM 3991] # 1 236 1 248 249 97 42.0 5e-19 MSVFKKLAGLLFEEADAEVLAEDELEPIEIKEKPKKATASPVVEEEKTHVQMESYFNPHA AAAKEPKKEEKKFVTIDLEEKPKEKEAIVLSEEPLRVKKPVKREEKKEFEFSPVISPIFG SSEEESKPKKKSAAPLPQRSKKKNPLGTIISPYYGVGELEEFEAKAQEKIEEKEKLKKEE LPQQEVEKYDLEEEINSVPLEDMIEKTPGEDGDDLMQISLFGESTPISSVDDASDKE >gi|312953956|gb|AENW01000058.1| GENE 188 194874 - 196178 1665 434 aa, chain + ## HITS:1 COG:lin1646 KEGG:ns NR:ns ## COG: lin1646 COG0773 # Protein_GI_number: 16800714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Listeria innocua # 3 427 4 424 447 410 48.0 1e-114 MHYHFIGIKGSGMASLATIVADRGDEVSGSDIEKYIFTQQPLEERHIPITSFSADNIHEG DTVIIGNAFNESNPEVKKALAMDTVKTYWYHEFLGSLAKEYTSISVAGTHGKTTTTGMLS HVMSLAAPTGYLIGDGTGEMPKDSRYFVLESCEYQRHFLAYKPEYAIITNIELDHVDYYK DMEDYCDAFEAFANQIQKGVVLFGDDAAVRSLHVKTEHLYYGLKDHNDVQAVHVKQHEDG MQFDVLYRKKLFAHFDLPFVGKPLLWNSLGVIAIGIMEGLSGELLQEGLQSFPGVKRRFT IEENGDNVYIDDYAHHPTAVKYMIEAARIKYPGKKVIALFKPDRYSRIYYFMDRFAEELN QADEVYLCHFPENAAREDGIDITISDLADKCEKATVINEDEEAARMLAQRGPAVYLFMSS KDIYKLKNIVKTFQ >gi|312953956|gb|AENW01000058.1| GENE 189 196229 - 196606 559 125 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400554|ref|ZP_06644699.1| ## NR: gi|293400554|ref|ZP_06644699.1| signal Transduction Histidine Kinase (STHK) with CheB and CheR activity [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 114 1 114 131 155 76.0 6e-37 MGLDQLLELTSSVASKALPICGVVVLIFLAVFVKHLIVLLKNANDAVVKMSKTLETTNRQ LETLDKPLNTLNELSETVDCVHEASKHAVRSTLVAVIENFSSIKDWVFAGMKKEDDRDEE DGVSE >gi|312953956|gb|AENW01000058.1| GENE 190 196609 - 197160 659 183 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160915066|ref|ZP_02077279.1| ## NR: gi|160915066|ref|ZP_02077279.1| hypothetical protein EUBDOL_01074 [Eubacterium dolichum DSM 3991] # 6 179 8 178 179 106 39.0 6e-22 MDNEREKEVEDLEQKAKFTIITMECDDDDENGRSKKILDDAAIQLQRLFQEMRDWLREHA DSMEVNERMERLKLETQKLLASTHDRLQRFSQREGVQAGSKKAAAAADKLAGYVQEGIQE VRQNEYVRRSVHAVADTVDTIRNDEQVKKGVRKLKKGTLKAAEAAFQGLKRVLDTDEDDS RKG >gi|312953956|gb|AENW01000058.1| GENE 191 197167 - 198162 1473 331 aa, chain + ## HITS:1 COG:BS_ccpA KEGG:ns NR:ns ## COG: BS_ccpA COG1609 # Protein_GI_number: 16080026 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 331 1 333 334 211 36.0 2e-54 MKRITIYDVAKEADVSLATVSRVINGSEVVREDTRIKVQEAIEKLGYKPNAIAQGLALQK TTTIALIVPEASYFYTGQIINGLIDVAKIYKYNIMLHTTTEGITEMNDIIENIIKSRVDG VVIFNDKLNKEELNQLTRYQVPIVVIGNKMSDDTVGSVYVDYANLVYEYASGCIKQGKKN IALVEDRKNPQMIKQLLDGLNRAFEEQGMKFESFIQIPKEYRSSYLFLKEYMKQGIRHDV VITYRDSQAMAVMNTAKEAGISIPDEMELICILDSKYNAMARPQISGFKIPDYDLGAVAM RLLTKMLHDENEVTDKEIELSYIYTPRKSTK >gi|312953956|gb|AENW01000058.1| GENE 192 198434 - 199666 608 410 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 10 407 16 414 418 238 36 1e-61 MKLFDELKYRGLINDVTSPQLEEKLNNGGLTFYIGTDPTGDSLHIGHYSSLLCAKRLKEH GHHPIMLVGGATGFIGDPKASGERNMLTKEVLEHNYQCLSKQIEALFGFEMVNNLDWTKD ISVIDFLRDYGKYFNVNYMINKETVKRRLDAGISYTEFSYMILQALDFLHLYEDKGCTLQ LGGQDQWGNITSGLELIRKKHGADVECYGLTMPLITKADGTKFGKSESGTVWLDKHKTSA YEMYQFLVNSEDEKVIDYLKKLTFLSKEEIDALEEKVKTEPHFREAQKTLAKEVVTFLHG EEEYNKALKITNALFKGNIKELDAGELQDALKGFEAAEIADELTLTDTLVQAGIASSKRE AREWINQGSIQINGDKVKDVEFIVSSKNAISKGRTLIKKGKRNYFVISQK >gi|312953956|gb|AENW01000058.1| GENE 193 199870 - 200610 679 246 aa, chain + ## HITS:1 COG:no KEGG:Athe_0978 NR:ns ## KEGG: Athe_0978 # Name: not_defined # Def: dipicolinate synthase subunit A # Organism: A.thermophilum # Pathway: not_defined # 44 238 74 283 292 73 27.0 8e-12 MIQVYDNLSRDFMVDRLDAQTDFLNLPQYQAVVFPVKGVDEFGYVRIQEQAIHIPHAFYE MQGKDCLLFCGIRNAVLDALPQRKIYYMLEESVIHENAVLTAEGVLNELISCICKSIYDI QVDIVGYGHCGQVIYDMLKNLHVRVRIIRRDCKKEGDFLPVRDWETCGDVIIHTATGVMI APSRMRSWKNKPVIIDISTPDLIDLKAAHEEGITVIKAGNLPGRFACISAGNIIAECIRG KLNNGK >gi|312953956|gb|AENW01000058.1| GENE 194 200600 - 201178 564 192 aa, chain + ## HITS:1 COG:BS_spoVFB KEGG:ns NR:ns ## COG: BS_spoVFB COG0452 # Protein_GI_number: 16078737 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Bacillus subtilis # 1 189 4 193 200 166 43.0 3e-41 MENKRILFGICGSFCNHAAVLEQLTALCERNDVTAVVSENVYTCSTRFFDKDVFMGKVKD VTKHDIIHTIVEAEKVGPANAYDIMVIAPMTATVAAKMAHGIYDHPVTLSAKAMIRNQRN IVFGIATNDGLGISGVNIFSLINMKHFYIIPFRQDAPFSKERSIVSDWELMEQTMDQALN DRQLQPILLGGR >gi|312953956|gb|AENW01000058.1| GENE 195 201182 - 202048 877 288 aa, chain + ## HITS:1 COG:lin1474 KEGG:ns NR:ns ## COG: lin1474 COG0329 # Protein_GI_number: 16800542 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Listeria innocua # 1 276 3 285 293 185 37.0 7e-47 MKKLMVALVTPFTRDNKVDYKSMDRILHRLLKEGCDGFIVCGTTAETPTLSHNEKLSILR HVIKRVKHRAEIWYGCGSNDTAATILACREAQKEAIDGVLLVTPYYSKPNAAGLYAHFDA LASAVDTNIMLYNVPARTGVELTYETIHALLEKHKNITALKQACSNLDMVRRLKQQHPDF LIYSGEDGFFDEGFDAGMDGLVSVMGHVCMKELRTFCDDERVDNRLRRRLYELAALTFTE ASPAPVKYMLHLQDECENILRLPMVAVSEAAENRIQEYFTKYRHRLED >gi|312953956|gb|AENW01000058.1| GENE 196 202075 - 202254 319 59 aa, chain + ## HITS:1 COG:no KEGG:GC56T3_0656 NR:ns ## KEGG: GC56T3_0656 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_C56-T3 # Pathway: not_defined # 1 59 46 104 104 65 54.0 7e-10 MVQIKVFDEEHEDDLTEVVNAWLQEHADIRLMDIKFSTAVSDFEEEQIYCFSAMVIFST >gi|312953956|gb|AENW01000058.1| GENE 197 202298 - 202462 97 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKKTEILCSVHNCVYNKDACCNAETISVCCDNCVHPNDCHETECKSFRCRCTK >gi|312953956|gb|AENW01000058.1| GENE 198 202748 - 203680 1109 310 aa, chain + ## HITS:1 COG:CAC0790 KEGG:ns NR:ns ## COG: CAC0790 COG0614 # Protein_GI_number: 15894077 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Clostridium acetobutylicum # 17 289 15 286 307 117 32.0 3e-26 MKKTIGMLCMLLVTLGFVSGCQGRQEASSSDKTITVRDAKGEVEIPAEPKRIVDLSGNSD ILSLLGYSVAGTANSDAYDYTQLPTYLQEPLQGAKILGYSMQDTMDIEGILELHPDLIII SGVQEKMYEQLKKIAPTLMVELAQTDWRQDVNTFARMMQQEDRAASWLKSYDEKAKKAGA AVRKANGEDTTYLALLASGGQLFVFDAAGIGSVLYEDMGLKKPANMPRQDSISLPVISYE GLADLDADHLIVVGTDADMKALKKNSIYKSMQAVKNNRVLELPSSPYFNIGYSSIGRDVF LDEVQSLLVK >gi|312953956|gb|AENW01000058.1| GENE 199 203682 - 204662 1054 326 aa, chain + ## HITS:1 COG:BS_fhuB KEGG:ns NR:ns ## COG: BS_fhuB COG0609 # Protein_GI_number: 16080385 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus subtilis # 6 324 60 380 384 193 40.0 5e-49 MRKRILIATASGILLLLLGIALSVLAGAKDIPFDDVLHALFDYQETLHDQLIRDVRLPRA LSALLTGGLLAASGVMMQGILRNPIAEPSILGITQGSVMFVAIAPMLPLLTAAGNFWTAL AGAGFSGLLVFLFAVKYAGHPDVSRILLAGSALSIFFLSAASLSALIQNRSQELAFWIAG GFRQADWGAVIGLGIVTLVCMGSFLLLSGKVNLLSLGDEAAISLGIDAAGLKKKVILVMI PLCAMCVAVAGNIGFVGLFVPHILRSMLSRDIRHTLPLSFLFGGVLMVFSDIAARTLSAP YELPVGLFTALLGIPVFLLLVRKECG >gi|312953956|gb|AENW01000058.1| GENE 200 204662 - 205669 873 335 aa, chain + ## HITS:1 COG:BS_fhuG KEGG:ns NR:ns ## COG: BS_fhuG COG0609 # Protein_GI_number: 16080384 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus subtilis # 3 331 7 334 336 234 41.0 1e-61 MRKRFWIVGFCLFVLLAAAALSIMVGSFAISPSDVLRTLLGGGSSTHAFAVFQIRLPRIV LAILVGSALGVSGAILQGITKNPLAEPGMIGINAGSALFVVLWISYGANAYYSSLSNVKV LFMPLLAIAGAFCTTAFLYAYSWRKGIRPIRFLLTGVGVNAGITAVISFYQLQMSRGDYN QVLMWTNGSLWGSSWRYILVSAPLILFLAGLVWTHSRTLDILSLGDEGATALGVSTRRTR ILFLAAGAALAALATAVAGNIAFLGLLGPQIALRITGMRHRLLLPLAALISSILLVVADM LARNLFSPLEIPAGILVSMIGIPYFIYLMMKLDRR >gi|312953956|gb|AENW01000058.1| GENE 201 205674 - 206474 262 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 230 1 231 245 105 29 2e-21 MLEVHNLYAGYDGYNILQDVSLQIPEGKITMMIGPNGCGKSTLLKTMAGIITPQKGEVLL NGVSLKGMKRRQVAKRLALLPQSPLVPEGLRVRELVQYGRFPYQKAMRSLNRQDLEIVAW AMKKTGVLVHADAYVNELSGGQRQRVWIAMALAQKTGILLLDEPTTYLDIAHQLEILELL RDLNREEQTTIILVIHDLNQAAKFADHVIGMKQGRALYCGKAQEVIREQQLLQLYDIHAK IVQDEEHGYPICMDYALHKHTDIPEH >gi|312953956|gb|AENW01000058.1| GENE 202 206721 - 207245 664 174 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400566|ref|ZP_06644711.1| ## NR: gi|293400566|ref|ZP_06644711.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 171 1 170 187 220 61.0 2e-56 MRKFPLWCLLCFLLLTGCGDAHKEEQESIKNYESYVDAVLNNKGSESKIIPFDYKLSVFK QKDNSYQYEIIISNPRVAMYNIQAIAVDPALDSNSNVYPCLGLLGDDAKTSFNMIPYQAN GARNFVSKIFLDGISEHDQFTLQVMVTWKDSKLVNTSRVFFTCNYAQKDNEANG >gi|312953956|gb|AENW01000058.1| GENE 203 207269 - 208921 1950 550 aa, chain + ## HITS:1 COG:BH3277 KEGG:ns NR:ns ## COG: BH3277 COG2244 # Protein_GI_number: 15615839 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Bacillus halodurans # 14 550 6 538 539 176 26.0 1e-43 MSKNMDVSKRKQSIIAGGLISSAGIFFAKFIGLFYAVPYNSMLGTADNLAYYGVAFNIYS YLLNICTAGFPFAIATLIAKYSTRGDYQTSLLIKKLSASLMTCFGFGMMIIVILFSSPLA ALVMPDEGDSVKTMQMVLILISFALFFVPLLSSIRGFYQGLKHMEIYALSQVLEQVARVA FLLSASAIAVYALHTDQVWALYFGVISTSISAILAIMHLKLYDKKQMRELKRLAKTQEVA GNNDRREILKELVFIAFPYLIVAILGYSDTIVNTLFLSKGLEAHGNTDAEILLISGSINY GVLKLMSIPMILAPGFSSAIIPHITTALTNHDLKLVRKNIRDCVDIVLYIGLPISFCLFV YAKPLYAILFPPADPKNLELLADILSWFSIEAFLNTIGPIFTALLMAVGLRRLNIRNLAI MMVVKFSVAYPLLKYFGYQGVVMSSILAMGIFIILDIYALTSRYKIRWKYTLHKLLVILL AMAALFAVARGCDLIGLKGYGSGRMLSLLQLAVNGSLAMLVYFGITYFFSIPQTILHLDL SRLLKRGRRR >gi|312953956|gb|AENW01000058.1| GENE 204 208926 - 209627 916 233 aa, chain + ## HITS:1 COG:lin2436 KEGG:ns NR:ns ## COG: lin2436 COG1187 # Protein_GI_number: 16801498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Listeria innocua # 1 231 1 232 233 196 46.0 2e-50 MRLDKYLAHAGLGTRKEVKLAIRKGRVSVNGEVCRKDDRKIQEGVDVVCLDKEEIYYEAV VYIMLNKPQDVVSATSDPTYETVLDCIDAFLPKDCFPVGRLDMDTEGLLLITNDGKLAHR LLSPKHHVEKTYLVDLAQPLQEGDQKKLENGSIVLDEEPVLPARVEILEDTQILLHIQEG RFHQVKRMLHAIGNEVVHLKRIAMGPLRLDEALASGEWRYLSEEEITALKNVA >gi|312953956|gb|AENW01000058.1| GENE 205 209624 - 210085 212 153 aa, chain + ## HITS:1 COG:BS_dfrA KEGG:ns NR:ns ## COG: BS_dfrA COG0262 # Protein_GI_number: 16079240 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus subtilis # 1 141 1 141 168 110 39.0 1e-24 MISIVVAMDANQLIGANHKMPWHCPADLAHFRQLTLHHHLLMGRVTYEHLPKRLDHRILH VAGHKPLSDSDVLPCSDVQALCREWKKKEEVLYVCGGAQIYAAAIAYADELWITRIEQSY TGDTWFPAFCIGDFRLLSNEQKEGCSIMHYRRR >gi|312953956|gb|AENW01000058.1| GENE 206 210106 - 211407 1724 433 aa, chain + ## HITS:1 COG:BH1533 KEGG:ns NR:ns ## COG: BH1533 COG0213 # Protein_GI_number: 15614096 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Bacillus halodurans # 1 432 1 432 433 435 56.0 1e-122 MRFVDLIEKKKQKQPLTKEELHFFITGYVRGDIPDYQVSALLMAIYFNGMNAQETAWLTE EMLYSGDVIDLSAISGRKCDKHSTGGVGDKTSLSLAPMVAACGAKVAKMSGRGLGHTGGT LDKVESVNGFQVMRTQEQFISQVNDIGLALIGQTATLVPADKKLYALRDVTATVNSIPLI ASSIMSKKLAAGSDTILLDVKFGEGAFMETSEKAKELAEAMIAIGSHFGKDVKALISNMN QPLGNAIGNALEVKEAIATLQGKGPEDFTQLCLEAGSIMLMQTGIARDEENARKQLLEVI QNGKALEKLVAMVAAQEGDVEQVLHPELLPQAKEILEVTSREEGYVKELHALELGTLAMK LGAGRMVKEDPVDPAVGIVLNKKDGDYVNKGDILAYVHINHPLPQHWLEDFYQTYVFTQV KVEKQKLIHDIIR >gi|312953956|gb|AENW01000058.1| GENE 207 211543 - 211788 270 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRGVLLLLHVKQRSALLLYGVGVLFMSCYTLLALDTYVFHVMQWFPGIIRYPLFSLYGI SYLLFALPGIFLHVGSSGNDV >gi|312953956|gb|AENW01000058.1| GENE 208 212043 - 212603 106 186 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|160913571|ref|ZP_02076261.1| ## NR: gi|160913571|ref|ZP_02076261.1| hypothetical protein EUBDOL_00047 [Eubacterium dolichum DSM 3991] # 24 173 11 161 173 89 34.0 7e-17 MGIKVCKSFFIQSLRITNIVITVLCLLSILTSCSKNEKIDPDEYIQSVYSEYEQLAKLEN PTEQMILLKSQDSYELVQFKKKGNSFTYNGGHITNAPYGLKSIKAEGKLYIIVFIDNTVV KADRFSIQLTASDKDEYLILSCPDLLKQDKYMIKLYVMNVAYDVAKFIKFYDKKGTLIPE EHIPDL >gi|312953956|gb|AENW01000058.1| GENE 209 213310 - 213642 536 110 aa, chain - ## HITS:1 COG:TM1287 KEGG:ns NR:ns ## COG: TM1287 COG0662 # Protein_GI_number: 15644042 # Func_class: G Carbohydrate transport and metabolism # Function: Mannose-6-phosphate isomerase # Organism: Thermotoga maritima # 6 108 17 119 121 75 38.0 2e-14 MKSEVEHYENRCGGKGTMHIERLLQSEEMGSGVKMYAKVTIDVDASLGVHQHIGDGESYY ILQGRALYDDNGIKRELQPGDVTFTPDQGFHGIENIGDEPLVFMALIIKA >gi|312953956|gb|AENW01000058.1| GENE 210 213632 - 214231 732 199 aa, chain - ## HITS:1 COG:lin0482 KEGG:ns NR:ns ## COG: lin0482 COG1309 # Protein_GI_number: 16799557 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 185 1 185 186 146 40.0 2e-35 MQEHLDTKRILAAALKQLTCRKSFDKITIADITQQSGYNRQTFYYHFRDKYELLNWIYTD DAQQVFDENLSFENWPKYISALLNHMRSEKDFYINTIRSDETCFEQFLFDLTKSIFHMAI VSLDQHHQINEVEMNFYSQFYSFGITGVIISWVKNDMRESAERVSANLKSLAQDSEKLAY SRYREAYTKITNEEEEHEE >gi|312953956|gb|AENW01000058.1| GENE 211 214342 - 215505 1271 387 aa, chain + ## HITS:1 COG:BH2276 KEGG:ns NR:ns ## COG: BH2276 COG0477 # Protein_GI_number: 15614839 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 1 382 2 382 392 82 20.0 1e-15 MKKQMRWLLYAMNFLAFFAISMVNTQMIPFLSKLGYTVVQRGYILAANAVVAIAGQFLFG YLCDRFQRVKVFFFAAYVLLTASSFAMFLVERQTFWYHVFTVALMGGMVKVIMGLDETWM LEIDQENYGRLRASGALGLTIGSPIAGYLVRHFHYKSLLISLGIVSVILCWLIYKAKDAE KKEGERIRMESVRQLLKNKGYLLLVLIYLLVYMIGTADQYVVIDKMLDIGADTTAVGIKW ALQSFMEVPLFLFSSKILERFQTKTLLYFGTFMYGVKFLLYGFSFQPWMIILTAALQLVT LPIIMLTSKVLVKEITPQKLFSSAQMFAMAVFIGVSGLITPLITSYLSKAFGYDWTLYIV AAFSIVPLLLIFCYVHYFQKKTVKRSS >gi|312953956|gb|AENW01000058.1| GENE 212 215744 - 216265 526 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400576|ref|ZP_06644721.1| ## NR: gi|293400576|ref|ZP_06644721.1| hypothetical protein HMPREF0863_00861 [Erysipelotrichaceae bacterium 5_2_54FAA] # 1 168 1 170 175 142 41.0 8e-33 MEFTMRKDIDEYSIEEQGRCVFRASYEKEGGLLSIYLKNMYGDDIMGFYQLRKWYSRFRP CMDFTVYEGDEQIGELKKSRDGYELIYHDVYYRFYCGMHAGRRVVICFDRAQQIAEFVLD DISTLRFKSTTQQALLSLLCVLMKAFLDQEQFSQEAFLHHYIGVYNDASATAA >gi|312953956|gb|AENW01000058.1| GENE 213 216243 - 217016 1024 257 aa, chain + ## HITS:1 COG:FN0048 KEGG:ns NR:ns ## COG: FN0048 COG0647 # Protein_GI_number: 19703400 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 8 257 2 251 252 209 43.0 5e-54 MHPLLRHKTLLLDLDGTMYRGDEVIPGAPLFIEALHTLQIPYYFLTNNAMRTHAQNREKM EAMGFQGLRDAQYFTSAMAAAAYVRHETKLQRVFYIGEDGMREALLEQGFTLCEEHVEAV FAGLDSNVTYEKLCRAFYHLQKGAVLIGTNPDRRLPHGDYFRIGNGAMVHMLEYCSEQTA WMIGKPHEPMLKEALRYAGIAKEDAVVIGDNLETDVAFGLRHGCTSVFVTSGVHSRLDCE QRCLHPDLIIDNLLELV >gi|312953956|gb|AENW01000058.1| GENE 214 217055 - 217621 607 188 aa, chain + ## HITS:1 COG:PM1613 KEGG:ns NR:ns ## COG: PM1613 COG1238 # Protein_GI_number: 15603478 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 15 141 24 153 191 61 32.0 8e-10 MNVQDFFIVWQDIGLILYSVLKAFLPLPSLEVILVPLVLHSPQKWLLYSLEGAVGTCIGG AIGYGIARILGKKVLYNIAAKEDVEHGEELMDRYGLLAVFIGGITPIPDFLLAYLAGFTS MRLLPFLLCDGFARLLRSLLVTLSLRYLGTVMNVDAFGTWFSLAIMLWLVWKWWKSRKKI QAQTTSRK >gi|312953956|gb|AENW01000058.1| GENE 215 217594 - 218241 694 215 aa, chain - ## HITS:1 COG:L120396 KEGG:ns NR:ns ## COG: L120396 COG2071 # Protein_GI_number: 15674032 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Lactococcus lactis # 20 198 26 215 236 115 36.0 5e-26 MKVLAVLMRIEKLDHAWKWFINKPYVDRVEALGWSLYPICSMAGIASALQVCDALLLPGG YDVQSYYLKEDRNEHVTTYAQPMDHLEFQVIDAFMCNEKPILGICRGMQTLNVYAGGTLL QHIDTQTHAPKQLHTVHSSSRSVLHQLYPQSFTVNSYHHQVAGRLGEGFYTSAFSEENYV EAMEHENGRILAVQWHPELMEDDQILPYFLDVVCA >gi|312953956|gb|AENW01000058.1| GENE 216 218287 - 219318 866 343 aa, chain - ## HITS:1 COG:BS_ytqA KEGG:ns NR:ns ## COG: BS_ytqA COG1242 # Protein_GI_number: 16080100 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Bacillus subtilis # 30 341 1 312 322 328 47.0 9e-90 MAESAGNEQIFHLFFTVCVILCYNTYGDIMSYNNPFPYSDDNKRYHTWNYYLKHRFHSKV FKVPLNANFSCPNRDGTCGVGGCTFCSALGSGDYAGDIHDDLFRQFDQGMQMMQRKWPAG IPMAYFQAYTNTYAPLPVLKATFDPFAQRDDIAAISIATRADCLENDKIAYLQSLCTDKE IWVELGLQSIHDDTAQHINRGHTYAQFLDCVERLSHTDLKIAVHLMNSLPGENKLQMLET AAALAKLPVHAVKIHMLHIMEGTRMAQEYRQSPFVMLSREEYIDIVIRQLELLPAEMIIQ RLTGDGVKEALITPLWTLKKVTILNDIDKEMKQRNTWQGKYNT >gi|312953956|gb|AENW01000058.1| GENE 217 219416 - 220099 655 227 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 17 222 18 209 215 92 32.0 5e-19 MDVNKKVVQCRKYPITYTLVTKQVKNINMRISSKGEVVVSANPFVPMDKIDDFVSSKVSW IVKHQKSMQERSQKSMIDDKHIILFGNSLKIRKTTGKYNHVSYDKDTLYVQCREQADPEK VIRQFLDKLCRDVFLDIATLTFRSLSDYHLEFPDVKIRDMKSRWGSCTPAKNSITLNRKL IHYPFEFIEYVVLHEFVHFIQPNHSKAFYNIIENYMPDYKTRMEMVN >gi|312953956|gb|AENW01000058.1| GENE 218 220118 - 220951 958 277 aa, chain + ## HITS:1 COG:BH3627 KEGG:ns NR:ns ## COG: BH3627 COG1307 # Protein_GI_number: 15616189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 277 4 283 283 118 31.0 1e-26 MVHIITDTSALFTVAEGNDMGVHVIPLCVSIQDEHYRDLCFDTSSFLEKVRSGGIPTTSQ PPIGDVLAAYEEHGDEEILNICMADGLSGTYQTALMAKEQAPNADSITVLNSQTLCGPHR YLVEKAVKLRDEGKKAADIVAALKESMAHEHSFLIPQDYSFLKRGGRLKPAAASIGGLLK LKPVMHAVEDGSRLDKFTITRTLSKAADSIISYFREHGVDAAYRISVSHADALADARFFI DRLKNAFPDTELELLKLSPAFITQGGPQCIAVQYIRK >gi|312953956|gb|AENW01000058.1| GENE 219 220988 - 221392 488 134 aa, chain + ## HITS:1 COG:no KEGG:GAU_3654 NR:ns ## KEGG: GAU_3654 # Name: not_defined # Def: hypothetical membrane protein # Organism: G.aurantiaca # Pathway: not_defined # 4 122 2 122 137 91 46.0 9e-18 MGKQNRRNRCLLVGYVVLVIAAGLLSRSTLPLPDWFREYGGDTLWSMMMYGIFALLFPEA RVKSLLIATLLFSYLIECSQLLDYDWLNTLRATPLRYLLGQGFVWSDLLCYSTGCILACS LDVMMLKRRHGIYG >gi|312953956|gb|AENW01000058.1| GENE 220 221385 - 222425 1523 346 aa, chain + ## HITS:1 COG:MJ0555 KEGG:ns NR:ns ## COG: MJ0555 COG1363 # Protein_GI_number: 15668735 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Methanococcus jannaschii # 4 340 5 350 350 185 32.0 9e-47 MDKEFLYDMLRTPSVSGHEIALQKKVIQHMEPVADEILTDATGDVISVVNPHAEAKVLLC GHIDEIGFLVTRICEDGMLKVTKAGGIHPVLYLGTHVQVVCASQVLPGVVVTNRTLESKE QVQVEDLFIDLGFDSKAECERYVSIGDPVCAASEFTELAQGKLAGRALDDRIGAFIILEA LKKAKQKQAACGIYAATTCGEETTMRGAYHVATRVQPSCALIVDVTFASDYPGVSGDASG TVKLGGGAVLCSNSMINKPLNAALAAIAEEHQLDVQWEVFAGKAGTDGDVVHFTNGGVPV ALISIPLRYMHSSIETASYQDLETIIELISEFLVRFDDSFSFDPFP >gi|312953956|gb|AENW01000058.1| GENE 221 222443 - 223216 757 257 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 241 1 240 258 144 32.0 2e-34 MRCADILHVIEEYYPLSYALDWDNCGLQTGRFDKDVQTIYIALDAGDAVIADAVINHADL LITHHPLLFNGIKQIHDQDFIGRRIIELIQKEMCCYAMHTNYDVLRMAEVAAQMLQLKKT KVLEATSEDGKGIGQYGMLPEAMPVFQLCEQIKQTFELQGVQVYGDVSRQVQRIAISPGA GNSMISHALYKQCDVLITGDISHHIGIDAVAQGLAVIDAGHYGIEHIFIQDMAAFLSEKL KGVKIISAPLCHPFTIV >gi|312953956|gb|AENW01000058.1| GENE 222 223240 - 223392 72 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQIYKRSLYSGKLKLRYGWILAAMSAQNGIRIRNKQRQGIQLKIHTAIAL >gi|312953956|gb|AENW01000058.1| GENE 223 223709 - 224428 276 239 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKIRGIGMLWMSVLCILFLTSCRDDNKAVKHASVEHEENVYEKIEAKDIRRVKISGNAR SIIIKQDADTAFKFQNADLNAAHTYDVRSSRNGDTLNISVMMKNGEEDNDVLGSFLIYLP RKEFDVIETAGEFKQIHINPIHSDIFLHADKSVVALHLEAAKLDHDIVLDGSETNAFKSV SVYFDTVPASIKMEVNPIQNGSIQDPQHILDNGRLVSGTEKPVIRIHAAKEINLYKENS >gi|312953956|gb|AENW01000058.1| GENE 224 224677 - 225672 899 331 aa, chain + ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 1 323 1 333 473 214 36.0 2e-55 MKSLDIYGTLGPSLHTQDALYEMLCMGMNGVRLNLSHVDLTDCEEWLYAYQKAQEQAGVQ AKLLIDMKGPELRVGRLREPVLLEERQTVELGKDIPIPVELLAHTAVQQRLLLDDGRILL EVKQVREDALLCTVLHGGVLKSGKSLALVNGHIELPTLTESDIRNLKAARQYGVTGIMQP FVRNAQDLITVKETLKSIGNPDLQVYAKIENMEGVAHLKELFPYCDQIVIARGDLGNAMP LWELPAVQKRIQDICRVHSMPYMVVTQMLDSMMEHPVPTRAEVSDIFHAVYHGASSIMLT GETAAGKYPREAMKYFSETAKSALVCREEVL >gi|312953956|gb|AENW01000058.1| GENE 225 225778 - 226794 1541 338 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 338 1 337 337 399 59.0 1e-111 MIITLKKDAPKAEVEKLIHTFENKGLSVTMIQGDNYNVFGLVGDTSKIDEKLVKAHPFVE NVTRIAAPYKKANRLFHPADTIVDVAGIKVGGNEKIVVIGGPCSVEGDTQIMDIAKEVKN AGGDMLRGGAYKPRTSPYAFQGMGTEGVKCMVHARETYGLPIVSELMSADKIDEFVGHVD LIQIGARNMQNFDLLKAVGRINKPVLLKRGLANTIEEWIMAAEYIMSEGNENVIFCERGI RTFETYTRNTLDLSVVPIIKEKTHLPIIIDPSHATGDWRLVESASLAAIAAGADGLIIEV HNDPENAWSDGAQSLKPERFGEVIRKGRKIAEVIGRSM >gi|312953956|gb|AENW01000058.1| GENE 226 226814 - 228079 1492 421 aa, chain - ## HITS:1 COG:CAC0897_2 KEGG:ns NR:ns ## COG: CAC0897_2 COG0169 # Protein_GI_number: 15894184 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Clostridium acetobutylicum # 3 247 7 265 273 161 38.0 2e-39 MRYGLIGEKLGHSFSKDIHERIADYTFDLIPLSKEEFKTFMEKKEFTALNVTIPYKKDVI PYLDEMDEHAKAIGAVNTIVNRDGKLKGYNTDFTGFLYMVKKHNVHMEGKKVLIIGNGGA SAAIQAVVQHESAGSMVIVDVVPGNGAISYDEMFSSHLDAEIIINTSPIGMYPRIGNAPI DISMFHKCEAVLDVIYNPILTRLCFEAQEMDIKRVNGLEMLIAQAKQSVEFFLDKSIDDQ IIDDIYQDMLRERCNIVLIGMPSAGKTTIGKMLENRMQKEFIDLDDIIIEKAGKSIPEIF EESGEAGFRAIETEAAIEVSKLNNKIIATGGGTIKHKVNMDYLRQNGITIFIDRDVDKLI SSDPNRPLSKSTDALEKMHAERLPLYQKYAAYVAVNNSDIESTVTEIEEAYRSILIDAVS D >gi|312953956|gb|AENW01000058.1| GENE 227 228382 - 229287 1079 301 aa, chain - ## HITS:1 COG:lin0491 KEGG:ns NR:ns ## COG: lin0491 COG0583 # Protein_GI_number: 16799566 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 291 1 291 297 323 52.0 4e-88 MNLNHLHYFRVLAKTEHYTQAANQLDITQPSLSHAIAALEKDLGCYLFEKQGRNIKLTKY GRIFYEYIDKGLQEVDLGERRLRELTSQENGWIDLAFIYTLGSHYVPHLLQSFLAQSQNR KIKFSLKQGNTTEILQGLKEEKYDVAFCSYVDNQPDINFLPIAQEEVVAIVSRSHPLAVH DSVDLARLKEETFVYYDRQSGIRPLLDSLFEQVGIEPNIICEVEEDSAVIGLVAINYGIA LVPNIAMLEQFPVKKLTITNPPHERYIYLATVKNRYLPPAVHTFCNFIVHHTSIKNPHTS D >gi|312953956|gb|AENW01000058.1| GENE 228 229449 - 231443 2504 664 aa, chain + ## HITS:1 COG:lin0492_1 KEGG:ns NR:ns ## COG: lin0492_1 COG1902 # Protein_GI_number: 16799567 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 1 363 1 364 364 498 64.0 1e-140 MGKYSSIFEPLTVKQMTIPNRIVMTPMGTNFGEQNGEMSFLHINYYEQRAMGGTGLIIVE NACVDYPCGSNGTTQLRIDHDNYIPRLYKLVETIHKHNTKIAIQLNHAGASAVEERIGMQ PVSASDVPNKKNGAAPRALSKEEILHIVDCYAKAAKRAQIIGFDAVEIHAGHSYLINQFL SPLTNKRTDEFGGSYENRARFARLVLEAVRKEVGAQFPIIVRISADEFLEGGNTLEDTLK LLEYFHAEADIIDVSCGLVDSIQYQIDANYLPDGWRSYMAKAVKEAYAKPVITTGNIRDP KVAEDILERGDADLIGMGRQMIADPSWTNKVHYGKEDTIRKCISCNIGCSGHRIGLNRPI RCSVNPSVNEGEEYRSWKVKKPCNVVVIGGGTAGLEAACTAAEVGCTTFLIEKEDHLGGL SVEISKIPDKKRLRDFPDYLIHRAEKLRNLITFTSTEATPSFVKMLKPDFIINATGSTPL LPPISGLRENIDASGSRVSGILGMIRQIDQYPKDLSGKKVCVVGGGAVGLDVVEFFAKRG AAVSIVEMLPVVGKDLDTVTKVGTYDMLEKHNVQVLTSTALQEVHPDHFVVKRNEQMETL DFDYGFVCLGMRAYSPVMEELKQTFADEDVELFNIGDSVRARRIIDGVAEGRNILNALKQ KEFL >gi|312953956|gb|AENW01000058.1| GENE 229 231482 - 232354 1227 290 aa, chain + ## HITS:1 COG:lin0493 KEGG:ns NR:ns ## COG: lin0493 COG0169 # Protein_GI_number: 16799568 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Listeria innocua # 1 286 5 290 291 421 70.0 1e-118 MAERISGHTELIGLIATPIRHSKSPKMHNEAFAKLGLDYAYLAFEVGNEELEDAVKGFKA LKVRGYNVSMPNKTVIGQYLDHLSPAAELCGAVNTVVNDNGVLTGHITDGIGYMRSLKDA GIEPAGKKVTITGAGGAATAIEIQMALDGVKEISIFNRRDEFWERAEQNVKNINEKTSCK ATLFDLADTEAFKREIEDSYLFANATGVGMKPLEGQMVIPDASFLRKDLIVTDVVYMPTE TELLRVAKEVGCKTMNGLGMMLYQGAAAFELWTGKEMPIDYMKEILDIKF >gi|312953956|gb|AENW01000058.1| GENE 230 232382 - 233560 1605 392 aa, chain + ## HITS:1 COG:lin2339 KEGG:ns NR:ns ## COG: lin2339 COG0477 # Protein_GI_number: 16801402 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 3 387 4 394 402 315 47.0 1e-85 MNKKYYPSAFILYLNYFIHGIGCSILGQAVIKEMLVAQWGQGMDAIGQVTMVAAALGLGR LISLPIAGPLSDKMGRKLSSLIGIASYAIFFIGVAMSPNMWVAYAAAILGGIANSFLDTG VIPACVEILEPRSSLATMLTKFFISAAQLLLPFMLGALAGASLSYNVLLYISGIAILVIG VLVIFAPMPKAEKAAGEKAPGLLENIRNSHFSAESIALIVIGFTCTATFQLWLNCAQTFA KDLAGVSDPSMMQTYYSFGSLAAIIVTAGLVSRIKGVRFLFVYPLITLITLVLVYMTRSE TMCYIGAALVGYSAGGVILQLVTATANDLFPHIKGTITSIVMIMSSLSNYTILSVAGTMD SAQILMMNIVITVIGVLLALFVNLRFQKLAGK >gi|312953956|gb|AENW01000058.1| GENE 231 233635 - 234147 702 170 aa, chain + ## HITS:1 COG:BH2672 KEGG:ns NR:ns ## COG: BH2672 COG3090 # Protein_GI_number: 15615235 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Bacillus halodurans # 1 150 1 150 183 85 40.0 6e-17 MKIIRWLDDNLEEALLIALLVTMTLLMGLQVFSRYILNASLSWSEELTRYLFIWSGFLSI SYCIKKWISIKIDQVILMFPKPVYVVAQLVLNVILFALFAFLAWHAVTYLQMSIASAQKS PALGLPMPFVQAAPLVGFTLAAVRALQQIVLEIGNIRYFITCGKIKERGE >gi|312953956|gb|AENW01000058.1| GENE 232 234152 - 235444 652 430 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 4 428 7 425 431 255 33 1e-66 MLAMVIMILFIVLLLVSVPISATLSAVSLAPSLLDPNFHISAEYIIRAMLGGIDSFPLLA VPMFVLSGILMAKGGVSKKLFDVFSYFLGEHTAGMPCAVIVTCLFYGAISGSAPATVAAV GSMTIPLLIRMGYDKVFVTAIVAVAGGLGVIIPPSIPFILFGMASGASVGKMFMAGIIPG ILIALLLMLYALYYCKKHGEDKEKIHAEVSVLHEKGFVKVFLDSFWALLTPVIILGCIYS GIASPTEAAVISVFYALIISMCIYRTLKFRDLKGVLVEAIRTFAPILFILSAAVAFSRII TLLQIPEMAGDFILSTFSGKVAVLLVINVLLLIVGMVMDTSPAILILTPILIPITNSLGI DPIQFGIIMVVNLAIGFVTPPIGINLFVASSLTDVPVMQIAKKAMPLIVFFLIALLAITF IPQISLLLVS >gi|312953956|gb|AENW01000058.1| GENE 233 235458 - 236462 255 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 [Algoriphagus sp. PR1] # 54 320 50 313 328 102 26 1e-20 MKKILFALFTFSLLLSGCAQKIEDPAEASAAYPWIIATDSPKDTVTGLFAHKFAEEVEWL SNGSIHMQVYENGTLGSDRELIESCMGQDIPFVLQNTAPQTNFMSKLAIFDLPVAYTDIK ELRNTLDDPDLMSMINKVYREKGFRLLAMGDQSFRVMTTNRKIQSIDDFKGQKIRTMENP YHIAFWQSIDANPTPMTFSEVYIGLQQGTIDAQENPYEVVVSGKIYEQQDYIVQTNHLPH LLSLIVNDEFYQSLSSEDQKIVDKAAENARNYARQQADERVNDRLNIITGSGTTIIELED SMIDQLREKAQPVYENIKAQTGDALYEAYTKRMQ >gi|312953956|gb|AENW01000058.1| GENE 234 236471 - 237232 838 253 aa, chain + ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 1 253 1 252 252 288 60.0 8e-78 MNTVNVRNIVIGEGIPKICVPIVGKTKEELLSEVEVLKSVPVDVVEWRMDWFEEVECCEK AVAMLQVLREAMPEMPILATFRSKKEGGELEISTAAYVELNKAIIDSGNADLIDVELFTG EAQVKELIAHAHDKGVRVIMSNHDFDKTPSYNEILTRLKAMQTLGADIPKIAVMPTCKAD VITLLQATNDMHENFADRPIITMSMAGTGVLSRLCGEVFGSALTFGAAKKASAPGQMGVE DLKTVLSLLHKSL >gi|312953956|gb|AENW01000058.1| GENE 235 237547 - 238389 1104 280 aa, chain + ## HITS:1 COG:PAB1737 KEGG:ns NR:ns ## COG: PAB1737 COG0543 # Protein_GI_number: 14521153 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pyrococcus abyssi # 1 264 1 264 278 298 57.0 7e-81 MYKVIEKEILNPTVTKMVVEAPAVAKKALAGQFIILRVHEDGERIPLTIADYDREKGTIT IIFQIVGKTTMLLNQLNVGDSILDFVGPLGKPSHVDGYKKVCVIGGGVGCAIAYPTAKAL HENGTEVTVITGFRNKDLVILEEEFKQVSTHAYLVSDDGSTGVKGLVTNVLEDLINKGES FDEVIAIGPLIMMKFVCQLTKKYGIKTVVSMNPIMIDGTGMCGGCRLSVGGETKFACVDG PDFDGHLVDFDEAMSRGATYRDFEAHARDAACNLMNKEVR >gi|312953956|gb|AENW01000058.1| GENE 236 238391 - 239776 1727 461 aa, chain + ## HITS:1 COG:MA3787 KEGG:ns NR:ns ## COG: MA3787 COG0493 # Protein_GI_number: 20092583 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 7 461 15 469 469 520 60.0 1e-147 MPNMSLKKVEMPVQDGEVRRNNFEEVALGYTKEMAMEEAQRCLHCPTKPCISGCPVAVNI PDFIEQVKEGNFEEAYQIIHETSSLPAVCGRVCPQEKQCEAKCVRGVKGEAVAIGRLERF VADWHRENVKDELKKPESNGHKVAVVGAGPAGLTCAGDLAKKGYQVSVFEALHVAGGVLM YGIPEFRLPKAVVQTEIEGLKQMGVDIQTNMVIGRSESVDDLFDAGYESVFIGSGAGLPS FMNMPGENLKGVYSANEFLTRCNLMKAYKDGVDTPIQHPKRAVIVGGGNVAMDAARCAKR LGVEEVTIVYRRSMDELPARKEEVEHAMEEGIVFKLLTNPVRVLGNEDGWVCGMECVSME LGEPDASGRRRPVEIKDSNFVLDVDCMIMAIGTSPNPLIRSTTEGLETNRKGCLIADDNG ATTREGVFAGGDAVTGAATVILAMGAGKTAAAAIDDYIQNK >gi|312953956|gb|AENW01000058.1| GENE 237 240131 - 240373 306 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293400596|ref|ZP_06644741.1| ## NR: gi|293400596|ref|ZP_06644741.1| conserved hypothetical protein [Erysipelotrichaceae bacterium 5_2_54FAA] # 14 79 28 93 94 65 48.0 1e-09 MKSKRNKLIIGGVAVIVAMFLLSLFLPAFQPFAKAGALVIYALVNYVQIKEMKRNGQDIE KPALFTAAVLIIVGYLLFFT >gi|312953956|gb|AENW01000058.1| GENE 238 240671 - 243070 3137 799 aa, chain + ## HITS:1 COG:BH3281 KEGG:ns NR:ns ## COG: BH3281 COG0495 # Protein_GI_number: 15615843 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Bacillus halodurans # 1 799 1 806 806 1141 68.0 0 MNYNHQEVEKKWQSYWLNNKTFACDAWDFDKPKCYVLDMFPYPSGNGLHVGHPEGYTATD IVCRMKRMQGHNVLHPMGWDAFGLPAEQFAITTGNHPAEFTKMNIDHFREQIRALGFSYD WDREISTTDPSYYKWTQWIFLKLYDKGLAYVDEIPVNWCPELGTVLANEEVIDGKSERGG FPVIRKPMRQWVLKITEYAERLLEDLELCDWPTSTKEMQINWIGKSKGANVVFKIKDTKK EFTVFTTRCDTLFGATYCVMAPEHPYVDEITTKEQKEAIDAYKTACATKSDLERTELNKE KTGVFTGAYAINPVNGKEVPIWISDYVLASYGTGAIMAVPAHDTRDWEFAKKFGIDIIPV LEGGDVTQEAYTEDGVHINSGFLDGMGKQEAIDTMIAWLEEHACGCAKTTYKLRDWLFSR QRYWGEPIPIIHMEDGTTRTVDIDELPLELPETKNFKPSGSGESPLAHCEDWLNVEIDGV KGKRETNTMPQWAGSCWYYLRYIDPKNDDAIAAEELLKHWLPVDLYVGGAEHAVLHLLYA RFWHKVLYDCGVVPTKEPFQRLFHQGMILGENNEKMSKSRGNVVNPDDIVESHGADALRV YEMFMGPLEAALPWSTTGLDGARRWLDRVWRLYTDYDKFTEANDGKLDKVYHATVKKVTN DVETLNLNTAISQMMIFINECYKAESIYVEYAKGFAKMFACFAPHMGEEIWSTVFGGCGT ITYEPWPTYDEAKLVEDVIEVIVQVNGKLRGKFTTEAGSDEEAMKKQALEISAVAAQIEG KTIRKIIVVKGKVVNIVAN >gi|312953956|gb|AENW01000058.1| GENE 239 243393 - 244259 924 288 aa, chain + ## HITS:1 COG:BS_yitT KEGG:ns NR:ns ## COG: BS_yitT COG1284 # Protein_GI_number: 16078176 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 18 282 12 277 280 154 31.0 1e-37 MRIQNKELSGAIVTLGCVLLSALLQTYVIQSMMQPMGLLSGGFTGLAILLDRIAGVAGFP FSVSAGILMLNIPLALLCYRGLSKRFTFYSSIQFVSSSIFLQLFHFQPIFHDLLLQVLFG GFLYGFSAVIALRGNASTGGTDFIALYVSNRLGKSIWSYVFIGNTILLCISGLLFGWLYA GYSIIFQYITTRTIEMFYHRYERVTLEIMTRNKDEVRDAYIRRYEHGMTIIPAYGGYSHN RIYLLRTVVSAYEVYDIIQLVRKTDPDVLVNVIKTEQFYGSFYQQPLE >gi|312953956|gb|AENW01000058.1| GENE 240 244413 - 245654 863 413 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1526 NR:ns ## KEGG: CDR20291_1526 # Name: vanTG # Def: serine/alanine racemase # Organism: C.difficile_R20291 # Pathway: not_defined # 67 370 7 289 712 111 27.0 4e-23 MTWKKRNIIIITMNFLALLLYMTTMLQRENPFGHTLTVILLAASGSLLVIRMETHMAFHA QTKQLQYQNLDLFRFLSSIIIIVLHVRPFFTVSYEIDMAINNIIGRICVPFFFFISGYFA AKQEQKKPDYIRSYIRSMIPVYLLWSAVYLPWSLSLAAPYIQQVSGLLCTIGLPTAIQNL LLLLLVPLAVIVALLYSGVYYHLWYFPALLLSMLVLRWWKRKYSLRGLLTVSFVLLLFGA TETYYGFCGQFFQSLLHYYYAVFFTTRNFLFFALFYVTLGYWMGKQEQPASSLCFLKLLL SIAALVGEGMLLQTTQRLDSNILLACVPLVYYLFSCLLYTNIHVPQLSEIPFRAISKYYY LVHPLMILFVHAWFPQVDSFWMAVAKVVCVLCCTHICTLLLIHMKKRYPAVPL Prediction of potential genes in microbial genomes Time: Sat May 14 03:28:00 2011 Seq name: gi|312953855|gb|AENW01000059.1| Clostridium sp. HGF2 contig00070, whole genome shotgun sequence Length of sequence - 111170 bp Number of predicted genes - 97, with homology - 90 Number of transcription units - 42, operones - 20 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 522 466 ## - Prom 548 - 607 5.7 2 2 Op 1 . - CDS 904 - 1062 178 ## COG1592 Rubrerythrin 3 2 Op 2 2/0.000 - CDS 1065 - 1985 560 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 4 2 Op 3 10/0.000 - CDS 1964 - 3436 1756 ## COG0682 Prolipoprotein diacylglyceryltransferase 5 2 Op 4 2/0.000 - CDS 3446 - 4390 1143 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 6 2 Op 5 . - CDS 4396 - 7218 3385 ## COG0178 Excinuclease ATPase subunit - Prom 7300 - 7359 5.7 + Prom 7169 - 7228 5.5 7 3 Op 1 . + CDS 7390 - 7920 384 ## 8 3 Op 2 . + CDS 7978 - 8460 604 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 9 3 Op 3 . + CDS 8447 - 9196 676 ## Elen_0591 hypothetical protein + Term 9338 - 9366 2.1 - Term 9358 - 9405 -0.9 10 4 Tu 1 . - CDS 9500 - 10354 1171 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 10375 - 10434 4.9 - Term 10439 - 10467 -1.0 11 5 Tu 1 . - CDS 10470 - 11324 1184 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 11410 - 11469 7.1 12 6 Tu 1 . - CDS 11473 - 13611 2229 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 13723 - 13782 4.5 - Term 13891 - 13952 7.1 13 7 Op 1 . - CDS 14095 - 15252 1301 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 15273 - 15332 2.2 - Term 15317 - 15354 4.1 14 7 Op 2 . - CDS 15365 - 17779 2846 ## COG0058 Glucan phosphorylase - Prom 17804 - 17863 11.8 - Term 17945 - 18004 10.0 15 8 Tu 1 . - CDS 18081 - 18725 312 ## - Prom 18793 - 18852 5.6 - Term 18954 - 18987 0.1 16 9 Op 1 7/0.000 - CDS 19189 - 20136 689 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 17 9 Op 2 1/0.000 - CDS 20155 - 20556 335 ## COG2246 Predicted membrane protein - Prom 20595 - 20654 5.5 - Term 20675 - 20718 -0.9 18 9 Op 3 40/0.000 - CDS 20820 - 22697 884 ## COG0642 Signal transduction histidine kinase 19 9 Op 4 . - CDS 22690 - 23391 712 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 23416 - 23475 5.0 - Term 23459 - 23498 5.1 20 10 Tu 1 . - CDS 23508 - 26054 871 ## COG4485 Predicted membrane protein - Prom 26093 - 26152 4.1 - Term 26187 - 26236 12.4 21 11 Op 1 5/0.000 - CDS 26246 - 27346 508 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 22 11 Op 2 5/0.000 - CDS 27351 - 29939 1715 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 29975 - 30034 5.7 - Term 30036 - 30075 9.3 23 12 Op 1 1/0.000 - CDS 30118 - 33570 2540 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 24 12 Op 2 . - CDS 33585 - 33977 494 ## COG0615 Cytidylyltransferase 25 12 Op 3 26/0.000 - CDS 34028 - 34864 709 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 26 12 Op 4 . - CDS 34877 - 35695 468 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component - Prom 35849 - 35908 5.9 - Term 35956 - 36012 5.2 27 13 Tu 1 . - CDS 36072 - 38045 1142 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 38066 - 38125 7.2 28 14 Op 1 . - CDS 38223 - 39032 554 ## Phep_1535 LmbE family protein - Prom 39061 - 39120 8.1 29 14 Op 2 . - CDS 39127 - 40128 886 ## COG0240 Glycerol-3-phosphate dehydrogenase - Prom 40165 - 40224 7.0 30 15 Tu 1 . - CDS 40231 - 42090 1984 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 42188 - 42247 4.3 31 16 Tu 1 . + CDS 42357 - 42440 85 ## + Term 42460 - 42500 8.2 - Term 42448 - 42487 8.4 32 17 Tu 1 . - CDS 42493 - 44187 2134 ## COG1109 Phosphomannomutase - Prom 44296 - 44355 7.5 - Term 44488 - 44539 0.6 33 18 Op 1 . - CDS 44634 - 44801 59 ## - Term 44807 - 44867 9.6 34 18 Op 2 . - CDS 44875 - 45141 286 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 45174 - 45233 5.2 35 19 Tu 1 . - CDS 45269 - 45718 545 ## COG1683 Uncharacterized conserved protein - Prom 45777 - 45836 5.8 - Term 46142 - 46185 4.0 36 20 Op 1 . - CDS 46191 - 46634 465 ## COG2105 Uncharacterized conserved protein 37 20 Op 2 3/0.000 - CDS 46603 - 47244 681 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 38 20 Op 3 6/0.000 - CDS 47260 - 48195 1071 ## COG3817 Predicted membrane protein 39 20 Op 4 . - CDS 48188 - 48865 836 ## COG3819 Predicted membrane protein - Prom 48939 - 48998 8.9 40 21 Tu 1 . - CDS 49014 - 49760 672 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 49780 - 49839 4.6 - Term 49955 - 50008 6.4 41 22 Op 1 . - CDS 50070 - 51254 1447 ## COG0628 Predicted permease 42 22 Op 2 2/0.000 - CDS 51270 - 53246 2567 ## COG0556 Helicase subunit of the DNA excision repair complex 43 22 Op 3 2/0.000 - CDS 53236 - 54717 1757 ## COG0793 Periplasmic protease - Prom 54750 - 54809 6.8 - Term 54993 - 55025 -0.2 44 22 Op 4 28/0.000 - CDS 55035 - 55937 1104 ## COG2177 Cell division protein 45 22 Op 5 1/0.000 - CDS 55930 - 56619 367 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 46 22 Op 6 2/0.000 - CDS 56681 - 58078 1266 ## COG0739 Membrane proteins related to metalloendopeptidases 47 22 Op 7 28/0.000 - CDS 58075 - 58971 806 ## COG2177 Cell division protein 48 22 Op 8 2/0.000 - CDS 58964 - 59653 332 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 59714 - 59773 6.3 49 22 Op 9 . - CDS 60265 - 61131 954 ## COG1284 Uncharacterized conserved protein - Prom 61154 - 61213 7.4 - Term 61868 - 61927 12.0 50 23 Op 1 . - CDS 61933 - 62298 250 ## CDR20291_1764 hypothetical protein 51 23 Op 2 . - CDS 62376 - 62549 121 ## gi|210612983|ref|ZP_03289548.1| hypothetical protein CLONEX_01750 52 23 Op 3 . - CDS 62614 - 63477 768 ## COG1484 DNA replication protein 53 23 Op 4 . - CDS 63474 - 64208 369 ## CDR20291_1762 phage protein - Prom 64241 - 64300 4.0 54 24 Tu 1 . - CDS 64322 - 64720 202 ## CDR20291_1761 hypothetical protein + Prom 64765 - 64824 5.2 55 25 Op 1 9/0.000 + CDS 64847 - 65125 351 ## COG3077 DNA-damage-inducible protein J 56 25 Op 2 . + CDS 65122 - 65412 275 ## COG3041 Uncharacterized protein conserved in bacteria + Term 65421 - 65461 9.1 57 26 Tu 1 . - CDS 65520 - 66845 453 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Prom 66918 - 66977 2.1 58 27 Op 1 . - CDS 67153 - 67443 348 ## CDR20291_1757 hypothetical protein 59 27 Op 2 . - CDS 67471 - 67932 338 ## CDR20291_1756 rna polymerase, sigma-24 subunit, ecf subfamily 60 27 Op 3 . - CDS 67943 - 68395 275 ## CDR20291_1755 sigma-24 (FecI) - Term 68403 - 68450 9.1 61 28 Tu 1 . - CDS 68499 - 68912 355 ## CDR20291_1754 rna polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily rna polymerase sigma-70 factor) - Prom 68996 - 69055 2.9 - Term 69247 - 69287 8.0 62 29 Op 1 . - CDS 69388 - 69759 257 ## COG1321 Mn-dependent transcriptional regulator 63 29 Op 2 34/0.000 - CDS 69762 - 71261 348 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 64 29 Op 3 . - CDS 71272 - 72000 346 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 65 29 Op 4 . - CDS 72000 - 72587 544 ## DSY4896 hypothetical protein 66 29 Op 5 35/0.000 - CDS 72606 - 74354 191 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 67 29 Op 6 . - CDS 74351 - 76099 230 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 76136 - 76195 4.8 - Term 76136 - 76193 14.7 68 30 Tu 1 . - CDS 76416 - 77033 453 ## COG1309 Transcriptional regulator - Prom 77090 - 77149 7.8 - Term 77148 - 77201 12.2 69 31 Op 1 . - CDS 77222 - 77578 339 ## CDR20291_1745 hypothetical protein 70 31 Op 2 . - CDS 77605 - 79485 1227 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 71 31 Op 3 . - CDS 79482 - 80930 678 ## COG3883 Uncharacterized protein conserved in bacteria - Prom 81009 - 81068 6.5 - Term 81024 - 81083 17.1 72 32 Tu 1 . - CDS 81167 - 81682 74 ## - Prom 81706 - 81765 9.7 - Term 82108 - 82142 -0.8 73 33 Op 1 3/0.000 - CDS 82159 - 82833 519 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 74 33 Op 2 3/0.000 - CDS 82849 - 84285 1146 ## COG1070 Sugar (pentulose and hexulose) kinases 75 33 Op 3 . - CDS 84282 - 85271 1167 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 76 33 Op 4 4/0.000 - CDS 85287 - 86339 1144 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family - Prom 86366 - 86425 3.5 - Term 86460 - 86517 5.1 77 33 Op 5 . - CDS 86540 - 87745 1202 ## COG4857 Predicted kinase 78 33 Op 6 . - CDS 87769 - 89100 1405 ## COG1757 Na+/H+ antiporter - Prom 89305 - 89364 4.3 + Prom 89262 - 89321 7.4 79 34 Op 1 . + CDS 89436 - 90203 713 ## COG1349 Transcriptional regulators of sugar metabolism 80 34 Op 2 . + CDS 90222 - 91388 1050 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 91393 - 91442 5.1 - Term 91477 - 91535 7.0 81 35 Tu 1 . - CDS 91547 - 93277 1200 ## HMPREF0424_1190 glycosyl hydrolase family 25 - Prom 93299 - 93358 6.8 - Term 93484 - 93508 -1.0 82 36 Op 1 6/0.000 - CDS 93533 - 94516 1133 ## COG1186 Protein chain release factor B 83 36 Op 2 . - CDS 94633 - 96981 2823 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 97175 - 97234 5.5 84 37 Tu 1 . - CDS 97294 - 98049 551 ## BC2635 triple helix repeat-containing collagen - Prom 98138 - 98197 8.9 - Term 98142 - 98196 1.6 85 38 Tu 1 . - CDS 98204 - 98401 228 ## COG1278 Cold shock proteins - Prom 98442 - 98501 6.8 - Term 98677 - 98720 7.2 86 39 Op 1 . - CDS 98731 - 98928 264 ## COG1278 Cold shock proteins 87 39 Op 2 . - CDS 98956 - 99696 503 ## Sez_1546 ComF operon protein C ComFC 88 39 Op 3 . - CDS 99621 - 100775 894 ## COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) - Prom 100836 - 100895 4.6 - Term 100807 - 100857 8.4 89 40 Tu 1 . - CDS 100934 - 101944 963 ## COG1087 UDP-glucose 4-epimerase - Prom 101970 - 102029 8.1 - Term 102114 - 102160 -0.8 90 41 Op 1 . - CDS 102202 - 103200 1138 ## COG2222 Predicted phosphosugar isomerases 91 41 Op 2 13/0.000 - CDS 103237 - 104067 1127 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 92 41 Op 3 13/0.000 - CDS 104057 - 104827 1054 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 93 41 Op 4 9/0.000 - CDS 104913 - 105389 560 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 105427 - 105486 2.3 94 41 Op 5 . - CDS 105555 - 105974 469 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 95 41 Op 6 . - CDS 105988 - 106809 903 ## COG1082 Sugar phosphate isomerases/epimerases 96 41 Op 7 . - CDS 106799 - 109555 2608 ## COG3933 Transcriptional antiterminator - Prom 109590 - 109649 4.2 + Prom 110030 - 110089 5.0 97 42 Tu 1 . + CDS 110169 - 111152 627 ## Predicted protein(s) >gi|312953855|gb|AENW01000059.1| GENE 1 3 - 522 466 173 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRITGIGIMVCMLLHYLLPVYAADSIQTEFERFLSFVHEHPQGGTFEMQGDMIINADII TSREITIYTNGYQVRIEHNIDGDSNVNIDNFNNDAAWGFVDKEKTLTIEGSGKNRPLVYM NTGVSAFGLRIHSTEGTALEIAGGEGLYAKYTDKKNYISAEGENAIGVLNKNP >gi|312953855|gb|AENW01000059.1| GENE 2 904 - 1062 178 52 aa, chain - ## HITS:1 COG:alr1174 KEGG:ns NR:ns ## COG: alr1174 COG1592 # Protein_GI_number: 17228669 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Nostoc sp. PCC 7120 # 3 52 182 231 237 62 52.0 1e-10 MAKYVCDICNWEYDEAAGLPDQGIAPGTKWEELPEDFKCPLCGAPKEMFTQL >gi|312953855|gb|AENW01000059.1| GENE 3 1065 - 1985 560 306 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 5 296 2 296 306 220 41 3e-56 MERRYDLIIIGAGPAGMSAAIYGSRAGLKTAMLEMGAPGGKLIKTAEISNWPGIIETNGA KLASDMFEHSTSFGAEYLYGNVIRVEDGAYKKIICEDGTEYEAKAVIVATGTQERMMNVP GELENVGRGVSYCAVCDGAFFRDQEVVVIGGGNSALEEANYLTQFASKVNIIIRRDVFRA DSIVQNAIKDNPKITVVTKHVPVRVVDDGMRVTGLVIRNVDTNVETEMKTHGIFPYIGLD PATSFLEGLGILDERGYMIVDENCETKAKGIYGAGDVIAKKLRQVVTATNDGAIAAQHAF HEIKGI >gi|312953855|gb|AENW01000059.1| GENE 4 1964 - 3436 1756 490 aa, chain - ## HITS:1 COG:L5776 KEGG:ns NR:ns ## COG: L5776 COG0682 # Protein_GI_number: 15672601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Lactococcus lactis # 8 238 12 239 261 218 48.0 3e-56 MTIFPDMKTVLTIGSLQVTWYAVLILSGAFLAYFLSLRQFKKWGYKEEVFENFFLMMLPI AIIGARLYYVIFEWNNLYAADPIRIFYIWEGGLAIHGGVIAGTIFGWFYFRRYQYNGLRI MDVVFPNMMLAQAIGRWGNFINQEAYGGVVNASFYDHFPAFIRDHMYIDGAFRQPTFLYE SVGNLIGFVLITVVYKKHGRKKRGDLAFAYLAWYGMIRFFIEGMRTDSLMLGGLRVAQLV SLLGVLIGILGILGVWDKVFKNIYPFKKHKPAVIFDLDGTLVDTKELIYKSFEHTFAQYK PGYTLSEEEKQSFLGPTLKQSFLRYFKEEQVDEIIACYRAYNHEHHDEFVKPIPHVKETL EYLKANDYPLAVMSNKLQDIVRMGLKQFDLESYFEIILGGADVERPKPDPIGILTACEQL HVPHDDVVYVGDAPTDIEACKKMGAFSVAFVYEESRAQEMQLCKPCAIIRDMSDLITIIK EDHEWSDVTI >gi|312953855|gb|AENW01000059.1| GENE 5 3446 - 4390 1143 314 aa, chain - ## HITS:1 COG:BH3590 KEGG:ns NR:ns ## COG: BH3590 COG1493 # Protein_GI_number: 15616152 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Bacillus halodurans # 7 313 4 309 310 236 40.0 3e-62 MEEQNIVKVRTLVENFDFIQITGDDASLERPIVIADTNRPGLELAGYFENSQQKRLVILG DKEIAYIATMSVHKQRKSFDFITNEQTPAIIVTKGHKCPDVLKRYAKRKNFPIFLSSSPT YRLIVDIVAFLDEQLATSMCIHGGLLSIYGKGVLIRGESGMGKSEIALELIKRGHLLVAD DRVDCYRIHNKIVGKAPELLREMLEIRGIGVINVSRMFGVSSVLPKAEINFQVNLEPWKA DQDYDRVGIEEKKHENILGIDIPKIVVPVREGRSMAVIIESAVTNYMLSVMGMDSAKEFE QRVLDYIEKNKNEQ >gi|312953855|gb|AENW01000059.1| GENE 6 4396 - 7218 3385 940 aa, chain - ## HITS:1 COG:BH3594 KEGG:ns NR:ns ## COG: BH3594 COG0178 # Protein_GI_number: 15616156 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 1 939 1 940 957 1226 63.0 0 MNHDYIDIKGARENNLKNIDIRIPRDKFVIMTGVSGSGKTSLAFDTVYAEGQRRYVESLS AYARQFLGNSEKPDVDSIEGLSPSISIDQKTTSNNPRSTVGTVTEIYDYLRLLYARVGIP YCPTHNEPITSQTIKQMVDRIMEIEDKTRLTILSPIEHGKKGTHRDLFEHLRKEGYIRVR VDGEMKLLEDVESLEKNKKHNIDVVVDRIVKGSDRSRLHDSLETALKLSDGLAVVTYNEE EILFSSNYSCKYCGFNIPKLEPRLFSFNAPFGACDHCKGLGITQKVDVDYLIPDRTKSIR QGGIIYYKNIVGTENLEWQRFKALIDYYKIDIDKPIKDLKKSELDILLYGSKDLISYRLA SRSGNVMKKTEFIEGVCTLIERRYMETSSTMSREWYATFLAEAPCPICKGRRLNEQALSV RVGGINIYEWTTMSVKQAIEFMKQLELTQQQKDIAKLILKEIADRLGFLSNVGLGYLTLD RLAGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIDTLKNMRDLGNSL IVVEHDEDTMRASDYVIDIGPGAGIHGGNVVAAGTPKEVMANENSLTGQYLSGKRKIEIP AKRRKGNGKKLEIVGASENNLKNVSVKIPLGTLTVVTGVSGSGKSSLVNEVLSKGVMHAL GRTRIRPGKHKKIKGIENIDKLIDISQDPIGRTPRSNPATYTGVFDDIRDLYTQTPEAKM RGYEKGRFSFNVKGGRCEACQGDGILRISMHFLPDVYVPCEECGGKRYNEETLQVTYKGK NIYDVLEMSVEEAIDFFSNMHKIKHKLQTLKDVGLGYIKLGQSATSLSGGEAQRVKLASE LQRKATGKTLFILDEPTTGLHTHDVKKLLEVLQRIVENGDTVIVIEHNLDVIKSADYIID IGPEGGDEGGTIIASGTPEQIIKVENSYTGQYLKKVLEKG >gi|312953855|gb|AENW01000059.1| GENE 7 7390 - 7920 384 176 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKKVMLASLLAIGLAAGVGTQIHAQDTAYLCGGYHSHMHSAADGCLRTLKEQQAARDAA AKRQAEAAQRQAQATRKQNASTTPASNTTVQPEAVSTANANSSQQPGSQTAQQVADTASN PCPYHENCDGIHQHSENCDGTHQLNENCNNGMQGYHHSEGRGQGAHHGNGNGHHGR >gi|312953855|gb|AENW01000059.1| GENE 8 7978 - 8460 604 160 aa, chain + ## HITS:1 COG:lin0443 KEGG:ns NR:ns ## COG: lin0443 COG1595 # Protein_GI_number: 16799520 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Listeria innocua # 3 156 17 182 182 79 28.0 3e-15 MKSEEEIQNAIELYADMVQKICVLHMKQRADAEDVFQTVFLKYAQSEPFRDREHEKAWLL KVTMNACRERFRGWFHKHADLQTEVEACADLSEASYFLLDTLNQLPPHYRDVLYLFYYEG YKVREISEIKGKNENTIHTWLKRGREALREKLGGELDDFR >gi|312953855|gb|AENW01000059.1| GENE 9 8447 - 9196 676 249 aa, chain + ## HITS:1 COG:no KEGG:Elen_0591 NR:ns ## KEGG: Elen_0591 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 73 220 89 235 271 77 31.0 4e-13 MIFDEFDGIHASDEIKQKTLHNVMKQRSRKKRTGMTAALTLCVTCLLVVLFQPWRLMEAS PAPAPAPTLAVYSYVTLDINPSMEWKLDEQQRVVRVTAYNKDADNILTELQLEGVQLDTA LRMLLDNEQFSAYMKTGFLEVSVYSENSSVSLDLEQQINQQLEEVVPQNQFHCSHLDDDT HQEAQQHHMSAGKYRVIDEILRHDSAKSVEELQKLSMKELYSVLERYDPSAVPEGCHGRQ MRKGHHHGS >gi|312953855|gb|AENW01000059.1| GENE 10 9500 - 10354 1171 284 aa, chain - ## HITS:1 COG:lin2658 KEGG:ns NR:ns ## COG: lin2658 COG1307 # Protein_GI_number: 16801719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 2 272 4 274 283 127 32.0 3e-29 MKIAFVTDSGTGKSVGELAQAEIYSVPLQVSCDNKNYQDLEELGIDEIYALMKDGKMLST SLPSLGKIEELFQGLKQQGYDMIFAVPICSGLSGTINAMEMIAQQQGIAFDYVDCHVTAV VQEYMIKLAKQLHEAGKSIEQIKEVLQHIVHTTNTILLPSDLQHLKRGGRLTPLAATLGG LLKIKPILKINEETSGKIDVLDKVRTMHKAMDRVIEIMKREHVDDSYLITVAHADDEAEA LVYMDKLKQAFPNATHQIIKLVSVVGVHTGRGCQAVQYFKQIKE >gi|312953855|gb|AENW01000059.1| GENE 11 10470 - 11324 1184 284 aa, chain - ## HITS:1 COG:SPy0865 KEGG:ns NR:ns ## COG: SPy0865 COG1307 # Protein_GI_number: 15674893 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 275 1 275 282 144 31.0 2e-34 MKIAIVTDSGSGLTKQQAGELGIYYLPLQIIIQDKMFLDGENITVEEIYEYLRNGEMPTT SMPPMGLVEELFIQLKAEGYEAVIAVPLSGGLSSTSSVMQAVAKEHQVNLHVIESYTTCN IQRYLAISASQLVEQGHDLETIVERLRASAADSGTLIIPDDLQHLKRGGRLTPLAAALGG LLKIKPILRLDRESEGKVDVYDKVRTMSKAQSKAISTFQERGLNEAYTLTVLHSGAPKEG EKLKAMMEEAFPGLDVYYGLIGAVISAHTGVGCLGIQYIRKVEM >gi|312953855|gb|AENW01000059.1| GENE 12 11473 - 13611 2229 712 aa, chain - ## HITS:1 COG:BS_amyX KEGG:ns NR:ns ## COG: BS_amyX COG1523 # Protein_GI_number: 16080045 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Bacillus subtilis # 5 675 6 677 718 465 34.0 1e-130 MRQEKYYEAYLDDYDKVIVFMSRNSYEGVSNKFYLKDDQGHLFDLHIQSIETTQNNYNKY TLALYDPIEIGVEYQVMHQHARGVVLEYSGIVKTERFDEQFFYDGNDLGYTYDRDQTAFA LWAPTASRVKLEVCKNNRLYTYEMKRTDKGVYRYTILENLENATYVYLVRVNGVWRESID PYGTASIENSRRSAVVDLDKIRVRDVPLPKMTSACDAIIYETSVRDFTMQKGIGVTMPGK FRGFVEENEITKQQCSGFSYLKTLGITHIQLMPVTDFGSVDENYPLMHYNWGYDPVQYRV LEGSFSTEPANPYGRMFELTKLIEECHKQGIRVNLDVVFNHVYDKETHAFENTVPNYYFQ MNENGDFSNGTYCGNDVDSRRNMCHKYIVDACTYLVRTYHIDGFRFDLMGILDVATINAV YEACKALNPDFMVYGEGWDMPSFLDSGKRASISNNAQMPYVAHFSDRFRDVVKGRTNTNE VSVKGYCTGAVYLLDIMKNCLSGSCTNIGMEPMFTHPRNAVNYVECHDNMTSWDKLKECC KEDSKEVRIARAKMLMAAVLLAQGIPFIHSGQEFARSKHGLPNTYEESDEINKLDYLRRN QYQDMVKITKDLIRIRKEHPILRYSMKEDVEQHVSFSDIAQKVLLYKIRDEHDDMVIIFN PTGEYFSYEFEAAYPLLYYNGASEDILIKKVNIEPYSTIVFSRNDFLKPGIR >gi|312953855|gb|AENW01000059.1| GENE 13 14095 - 15252 1301 385 aa, chain - ## HITS:1 COG:FN1186 KEGG:ns NR:ns ## COG: FN1186 COG1473 # Protein_GI_number: 19704521 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 32 380 2 353 359 233 36.0 7e-61 MKEQLKHYIQEHMEEYKYLVNDLYEHPEIGNQEFRSMRVLCKMLRKEGFEVTEEYVVPTG FLGVWNSGKPGPVIAYMCEYDALPEVGHGCGHNLIAGMSLAAGCALKSILSNIGGEVRII GTPAEENFGGKVSMAAAHVFDDVDAALMLHPDTKNSLGGRTLAIYPLRFEFFGQNAHACT PQNGKSALDAAVMSYMSINLLRQFAEPNTFIHGVIAHGGEAANVIPAYASLEYYFRGETM EYVKELCEKAKACVEGACTMSGCTSRITTYECPYDDCVINYTLADMLKDEYEDFGYTWEG VDEVAQGSSDVGSVSYCCPTLQGYIKIADSCVNGHSREMAAATISQQGSRALFDGALALA DIGRRLIMEPDTMEKAWKELKANRK >gi|312953855|gb|AENW01000059.1| GENE 14 15365 - 17779 2846 804 aa, chain - ## HITS:1 COG:CAC1664 KEGG:ns NR:ns ## COG: CAC1664 COG0058 # Protein_GI_number: 15894941 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Clostridium acetobutylicum # 5 804 2 808 812 787 51.0 0 MANEFKNKNEFKEEFQRRIIERYGRSFEQAHITEKYMILGEMVRDYASIHWNASKNVVSE KQEKQMYYFSMEFLMGRLLTNNLMNLGIYEIAKEGLAELGQDINELEDLESDAGLGNGGL GRLAACFLDSLASLNLAGHGNCIRYEYGLFKQKIVNNEQVEVPDQWLSLGNVWEVRKPKH AVNVNFGGHVDMWMGEDGKAIVNHVPSLIVRAVPYDMPIVGQNTNLTNTLRLWSAEVADD ACDASSLNEYVNEVREICRNVYPDDSTEHGKILRLKQQYFFVAAGLNNIIESHMSTYHTL DNFSEKVAIQLNDTHPVLCIPELMRILMDDYKYDWDQAWDITKNTMAYTNHTVLSEALEK WPIQYVQDLLPRVFMIIEEIDRRFKYEVSHDMGRSDLMNECCVLKDGQVHMANLAIIGSH SVNGVAALHTKILKEDVMKNFHDIYPNKFNNKTNGITHRRWLLYSNPQLSNLLEKTIGPD FKANPERLQDLMKYVDDKDLQKEFMDVKMERKKILAAYIKDTLHIDIDVNSIFDVQAKRL HAYKRQLLNVMNIIDLYFRMKQDPSFRIYPRTFIFAAKAAPSYTFAKEVIKLIHYVADKV NNDSDVSPYMKVVFIPNYGVSIAEILMNAADVSEQISTAGKEASGTGNMKFMMNGAITLG TMDGANVEIVEKVGYDHAEIFGLRADDVALVKHENTYDVWRKYNENANIQKVVNSFVDST FSNDPKDFKQIYNELMFKNDEYLLLADFEAYSHAQKNIEERYRNKEEWAKTCLINIAQSG YFSSDRTIKQYADEIWNIEPVNMK >gi|312953855|gb|AENW01000059.1| GENE 15 18081 - 18725 312 214 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKKHKLAAVVLGIAAVCTIGIIATQYSSKEEYVSLQGSALSSPTDRVVIAGDKEYVVGA DGFEPGYYDVSTKEPVKTNAFNLGVNQTILNIRYYNHNKISLSQGSSVIMTRSKFEPLKF HDDIAVLNNTTGAFRCGEEIEAGTYKVSVEGKHKNAEIFFQVEMNTENKWEAVDNVQVKN KKSAILKIQGNEYLDIINFYPEYGDFKIYIKKVE >gi|312953855|gb|AENW01000059.1| GENE 16 19189 - 20136 689 315 aa, chain - ## HITS:1 COG:SP1606 KEGG:ns NR:ns ## COG: SP1606 COG0463 # Protein_GI_number: 15901446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 3 315 2 313 320 267 42.0 2e-71 MKLSLVVPCYNEADNVELFYEKVEATFRNETFDYEYIFINDGSRDQTYVKLKELVKTYPD AHINIINFSRNFGKESAMYAGMKESVGDYTVIIDADLQQDPAYVLRMMQILDEDDNLDSV AAFQEKRREGKILRGFKSAFYHMINRVSQVEFVDGASDFRLLSRPMVDAILSLPENNRFS KGIFSWVGFHTYYMAYDVQDRVNGQSSWSFWKLFKYAIEGFVSFTTMPLRIATVFGITFS GLAFLYLIVVLIQKLIMGITIPGYATTICLILLIGGIQLFCLGIMGEYLARTYMETKRRP IYVQRNKIDYKERTK >gi|312953855|gb|AENW01000059.1| GENE 17 20155 - 20556 335 133 aa, chain - ## HITS:1 COG:lin2694 KEGG:ns NR:ns ## COG: lin2694 COG2246 # Protein_GI_number: 16801755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 7 128 17 142 145 86 41.0 1e-17 MDEKKKNIIELLNYVVVGGLTTLVNFVVYFFCTHIQLHYLIANVIAWIFAVLFAYIANRK YVFKSEGNDQKAEFLQFVSLRAVTLVVESLLLFVCIQLAAMNENIAKIFVSIVTVIGNYV FCKFMIFKPKTQE >gi|312953855|gb|AENW01000059.1| GENE 18 20820 - 22697 884 625 aa, chain - ## HITS:1 COG:BS_yrkQ KEGG:ns NR:ns ## COG: BS_yrkQ COG0642 # Protein_GI_number: 16079695 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 329 619 137 427 432 117 26.0 5e-26 MNKKKNGWFLKTYVLLTVAFITFFTVYAFRYDVLDSLYKKGYVEFETKESMEKKLKPVIE EKYIYPENINDVTNKLNELFPDYDYHIWSTIYGEKKKVQVYETGYDYIEETQHYRETIDI TFARGILSVQIHPKITSYLNAYRLFCLVNAIIISFIMIILYRYEQKNSKLKTVLYHLWNK PKLHRLHKLSTELLLVSIGTILFVSFMLVFLYIGRDVPIAFMRELQLYEHALDEQAAVIQ EKLRNIDISKGNNKEIEKILKNNLPDTTYSFIEVIPNKKDKIYEYSYMNEMYENNDLYIL NHTYASTAHINYNYIMENDQGFVQLRINYYPYLNYTLPYLIVSVILSFSYLLIFLQLFIR NKIKAIQIIQKDTSILAGGDWSHSFQYYGSDEIGQLSDELRSMQKSFYDNMQNEKKARKA NQELITTLSHDLRTPLTSLLGYLELIRYREGSVEMKREYLDRSLLKVEQIRSLSNKMFEY FLVFEKEESLNLEVQPLSNLLNYIRENIEFMQQDDMKITYTLEDEHYQIACNIEMLQRAM DNLFSNMHKYADHSATAIVRGICEGNQYQLYMSNQIRIDDEKVESNRIGLKSVEKIIMMH NGTMNIDVKENTFTVVLELPLVIAE >gi|312953855|gb|AENW01000059.1| GENE 19 22690 - 23391 712 233 aa, chain - ## HITS:1 COG:BS_yrkP KEGG:ns NR:ns ## COG: BS_yrkP COG0745 # Protein_GI_number: 16079696 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 5 232 4 228 231 217 48.0 2e-56 MEQSRILVVDDDKEIREIIRVLLTQEGYDVSEARNGREALEYMNDHIDLYILDIMMPYMD GYELCEQIRKHSNAPILFLTAKGTQKDKAQGFFKGADDYLAKPFSYSELLVRVKAMLCRF MVYQGKQAEIEKRYRILQIRDIRIEERDEAVYVKGEKIAMTDLEYQLLHFMATHRNQTFS AEELFVSVWNEPYFTSANNTLMVHIRNVRKKIEEDARNPKYIKTIWGKGYRFE >gi|312953855|gb|AENW01000059.1| GENE 20 23508 - 26054 871 848 aa, chain - ## HITS:1 COG:BS_yfhO KEGG:ns NR:ns ## COG: BS_yfhO COG4485 # Protein_GI_number: 16077927 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 100 838 71 814 819 90 21.0 9e-18 MKKNDIRYMAVLGILIVLITGVLFTLLQSKQLVYGSITDWLSQHVAFAEYFRENFYQTGQ LYPDFSLQLGAGQNMAEFIYYGLLRPEILLSYAFPMIKMSTYIMISSIALTITSTELFYY WIRKQNISQHAAFFASVIFLCAGPMLFHTHKHVMFINYMPWLILTFIGIQRYLQKRKSAL MMIGIVLMILESYFYSVSALFMCGIYAIYEILRMQKKIDYLESLKTIGRLMGQVLIGVGI SCFILLPTVIMMFSHTREAIQSPTLMELLKPDMDISALTYTGFRSNAYSAGMCVIALAAV VYFIFRNSKEKRALGIMTLLITILPLFCYILNGLQYVREKSLIPMIPLIGYMIAEMLSEM ENKPSRRLLWILPFLFLPYFFIELEKLKLLYLIDAFFCSGIFILYTVTRKKYIFGIYLLF PLLLTMPTNKVENFVKQSQLSKFENTDKKAQVKAALDQDSSLYRFDDLHYALRTCNQVLD SRMYKTSLYSSNRNQDYSYFTDKVMGMPGPSTNNATVTAEKNSFFQSLMSVKYLYGKGTV PLHYSILSGDKNGYVAVNENVLPMGYATSDLLSKQQFQDLKYPYSMEAVYNNAVVERADV KEWKSSLQEVQLSYKLLHMDDSVTVKKLKNGYQLTVSKKSTINLRLDQSIDGQLLILDLP ITEIKKPSRTVVGIEINGIVNKRGSNSDMYGNNRNNFRYVLDRDKPWRDITLKLEKGAYT IQNPKAYLMDGSVLTERHKSIDALKGERMSGNNVLKGEIDVRDDGYFVTSIPFDKGFTVR LDNKEIAYEKVNTAFVGFPIKKGHHTVEITYQMPGKSAGIMVSILSLLIATALYLKQKVS MQRLKQKK >gi|312953855|gb|AENW01000059.1| GENE 21 26246 - 27346 508 366 aa, chain - ## HITS:1 COG:L152603 KEGG:ns NR:ns ## COG: L152603 COG1887 # Protein_GI_number: 15672909 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Lactococcus lactis # 1 359 1 365 371 259 38.0 8e-69 MGLKKLILHMVLWFCYQLAKCLPVRQNRITFVTLTSQILTGDFKLLDEELKRYPDIEIRY ILTKFEKTIKGDLLYFLNCIKQVFLINTSKVVILNDNNYVVSHFKRSQVRVLQVWHACGA VKKFGNEIDRQYEIKNYDYVLSTSDQWKPVYAKAFGVNEHQVLPLGIPRTDALFSKACRL AYRNELLEKYPVLQGKYVILYTPTFRGNIIKGLRHVDLDLSSLIEKLPDHYAVMYKMHPL LRDVDLGSGERILNVTDEELNHLYTVADCLITDYSSILFDFSIMEKKVILYTPDLAEYGE TLGFNIDLKSIPFPVCQTAESLTKELCTKDYDKKSIKAFKDTYFMYQDGESTKRVSSFIC QQLKQS >gi|312953855|gb|AENW01000059.1| GENE 22 27351 - 29939 1715 862 aa, chain - ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 7 210 5 211 344 146 40.0 2e-34 MSKSVDVSVIVPVYNVEKYIRVCLDTLVHQTLSNIEIIVVNDGTKDDSQKIIDEFSSLYP DKIIALKKENGGLSDARNYGLEHASGAYVGFVDSDDYTDIEMYQKLYEKAKQENADIVVC GYYGVQEQNGQFRHFQKGNLQEFDKSLQENPRLLYMNSTYAWNKLYRRELFIKTGIRYPK GCLYEDMAVTWTLFLHANKISKVDEPLYYYILKREGAITATYSSKTLQMFQSMELVNTYY KEQNAFNQYQDILCFLNLKHMLLRFQDFPGYHNLSLKKTMIKTGFQHMNRNFKNWKANSI FFEDVYKNRKIKYMVPYKAFWYLFMFVPKSALTCMKTVKKTVSKLKRLVSKRSYITRYAY HAYCKKHPVIKGQVLIESFQGKTVSDSPFYIAQQLQKQVDKIYIATTEKNRQEHKQLLKE HGLETAILVPVYSKAYQMALATSEILVNNVTFPPYFIRRDEQVYLNTWHGTPWKTLGKKM KNGIQDMSNIQRNFLQSSMLLFPNVFTKQRMIEDYNLTNLFTGLSYTAEYPRNLVFHEHE KTIAIKKRYGSEKLEMIAYMPTWRGLTSTALEIAGYAEELKKILQVLDETLNDDQMLYVN LHSLVKDVIPIQGYQHICSFPEGVDNYEFLMGCDMLITDYSSVLFDFALTKRPVILFVYD AEEYARDRGMYFSVQDLPFVKAETLKQLQEYITKQKSVEISKAAWNAYADVFVSKAAFDP AVCLKKVPVDSITDYADNKNKERTVYFIPKIKRLQDIQYLKEAAEDHSAIAVLDRQDFTP LTQKLLYQEFHECLDYIVMDVRMQLSPKEELKRLLHRFPGMEAYRREFQRILPNIKVKEC VDFKKSRYTFGMKKYIDSQNRR >gi|312953855|gb|AENW01000059.1| GENE 23 30118 - 33570 2540 1150 aa, chain - ## HITS:1 COG:lin1074 KEGG:ns NR:ns ## COG: lin1074 COG1887 # Protein_GI_number: 16800143 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Listeria innocua # 781 1150 2 384 384 280 37.0 1e-74 MSAKYKVSVIIPIYNVAEYLEECLESMVRQTIDSLEVIMVDDGSTDISGVIAQEYAKNYD NFFYYLKENGGLGNARNYGIQFVHGDYIIFLDSDDIVPDGAYEAMYKKAVETGNDMVVGD VQRFNSRKKYNSGLHRKAFRDAYDKTTILETPQLIYDTTSWNKLIKFSFWKEHDFKFPEK ILYEDIPVTMPLHFYANAVSVLNEIVYLWRERDGANKSITQNRTEMKNFTDRVKIMHMVD DFYNAHVSDDHALYMKDYKWMSVDLKLYIQEMLTADDEFIDYAMDVIREYMKDFRKDSFQ DLQAIDRMKYHLIETGNKKRLLELLAYEKGAYRTLKIKRKKVNGEMHYIGDFPFHDFPEE YYDMTKELRLYPETRSLQQVYWNDNKLIVKGYSFIQRLTCSSKHAQQLKANLLNVATKES VSVPLTVCKANGVRGRHGLKVDKSNRKARYYNYKWSGFEIEIDFSRPEIQKIANGILKVE LQYDREGIHTSFYAGGPVSGSDARPKYLNVKDTKVLPYYNLGYDLCLNCESLDVKVQQLT VTDHELIVKTQLSKETLICKSDDAVNELKVKQENDMQSAVLDLNAFHADHGVIMAKGGKA LSSNDLRLSRYAFTTDQLIRVYSDDAGYMNLAGEPHRSVLTRLYWAEEQIGMEVETRLSN ADKLKTAYFELKGESSSLTMPPVTGKINVQGSSVTAAAIIPICDDAFTKNMVADKWKTYI IYEFEDGSVQKHTIAADAVAQLSRKPYKDYYYSVYPNMDLDMIVKVTRKWKWYESNKLRR KFVELFIYPMLRMLPVRKKRIVFEGWWGQKFHCNPKAFYKYMDKEHPDYTCIWSLVDERT PIEGNGIRVRRKSLRYHYYMATSKYFVNNVNFMESFKKRKKQVEVQTMHGTPLKTLGLDV PGELPTEEARQKFIKKCSRWDYLVVQSSKAESITSSCYAFKKEFLKTGYPRNDVLFAKNN EKDITDIKKKLGISPEKKVIMYAPTWRVRNQFNMKIDIQELKKQIQDDYVLMLRIHPFAV KGLKEDLLDEFVINVSNYPSVEELYLASDIVITDYSSVMFDYAILNRPMLFFTYDLEDYR DTLRGFNFDFVAEAPGPLLKTSDEVIQSIVNIDKVAQEHDEALQKFRKKFCEYEKGTASE QIFQRVMQNQ >gi|312953855|gb|AENW01000059.1| GENE 24 33585 - 33977 494 130 aa, chain - ## HITS:1 COG:aq_1368 KEGG:ns NR:ns ## COG: aq_1368 COG0615 # Protein_GI_number: 15606564 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Aquifex aeolicus # 2 127 6 130 168 168 72.0 3e-42 MKKVITYGTFDLFHIGHLNLLKRAKALGDYLIVAVSSDDFNLREKGKVCQIKDVDRMEIV KAIRYVDEVILEENWEQKKLDVQKYDVDVFVMGDDWEGKFDFLKEYCEVVYLPRTEGISS TMIKSELKQK >gi|312953855|gb|AENW01000059.1| GENE 25 34028 - 34864 709 278 aa, chain - ## HITS:1 COG:SA0593 KEGG:ns NR:ns ## COG: SA0593 COG1134 # Protein_GI_number: 15926314 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Staphylococcus aureus N315 # 12 264 4 263 264 231 46.0 1e-60 MVKSIYDSSANAVEMRNVSKIYKLKKKDGKKSENERFFALKDITLNIPKGDVVGILGTNG SGKSTLSVILSGISDIDGGEMEINGEQALISINTGLNNQLTGLENINVKGALLGLTKKRI REITDGVIEFAELGDFLYQPVKKYSSGMKARLGFSISLALNPDIFIVDEALSVGDKGFAQ KCLNRMKKLRDEEDKTILFISHSLPQVRDFCKSGIWIEGGKLVETGDIDTICDHYAAYVD KLNKLSDKEKKAMLEEKFKERLIIDEKTSLLDKLFHKL >gi|312953855|gb|AENW01000059.1| GENE 26 34877 - 35695 468 272 aa, chain - ## HITS:1 COG:lin1062 KEGG:ns NR:ns ## COG: lin1062 COG1682 # Protein_GI_number: 16800131 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Listeria innocua # 3 272 2 267 267 160 32.0 2e-39 MFKSIRYVLNENFSNLYRIFCIAKYELLADMRDSKFGIFWNFASPAIQVFTYWLIFGVAW NKKPIGDIEYLPWLVVGYAAWWFVQPCIQNGCSAVFSKTNVITKMKFPVSVLPATICAKE FFNHGCMLLIAFVTLAIHGFFPNIYWFGLLYYALCAFAFVEAVSLILSVLTMLWRDIRKL ITSLMRMLMYFSPVIWECHFGNHVPYHELLNKIMKLNPVYYIVNGYRDSIFYNKTFLDHP AQTLYFWAVVIILFVIGCALMYKFKRKFIDMI >gi|312953855|gb|AENW01000059.1| GENE 27 36072 - 38045 1142 657 aa, chain - ## HITS:1 COG:CAC0946 KEGG:ns NR:ns ## COG: CAC0946 COG2333 # Protein_GI_number: 15894233 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Clostridium acetobutylicum # 1 424 5 317 320 86 24.0 1e-16 MRKIGISILVLFLALGMNIASPFQKNVIQAAENTGFEIHTISVGNADATLIRCGGQTMLV DAGYSTEAEEKGNSFKNPLSSYLMGNNKVSKEQSDAFRNNVKQLIAENPDNTVTKYLESQ GIQTVNTQEGSADKGKSGLDVMIATHPHYDHIGGFIPVMNRYFGVNTRMFWGAPFETDSY YEAYQSELMDAQLAREDDGLVDPFMSFGGPRAGDYFMLGEGDEQARVLFLTSADPAEGTS IDAINNSSLVIRIDYKNASFLLTGDLQREGQKKLIASAPALLTQLQEMAKRDDNLKDLLQ CKNILQVDYLKLPHHGYLNLGDLPDDSEVSGNYEFFEQVKPSIAVASTNGRTGNNLNALP AERTRRDLSYADIYSTADNGTIVVKSDGNHLTTSAKPMEKIYKAQTPQNLKVDVQEDQVL LSWSPVARPTEYRVYYQTDDSKAWHWLSCQQDTVYTFKKGKPGKAYRFVVRTADKYKEGW RFSTAAYSQEFTYPGKTEGFYQLSRRVKVFSSPNASKYYRYDPFKKKWLGSMKNYNNKPL LLTREYVNDEGTSYWSAYYNGKWIGYVNSYALKNNVTKDTYFGWGSNNTRKFNTPNPQKY WLYNAPSNKWVRRMTKYKNQNFTIKRSLARPDGSLYYSCYSKGKWIGYINSWGFQNQ >gi|312953855|gb|AENW01000059.1| GENE 28 38223 - 39032 554 269 aa, chain - ## HITS:1 COG:no KEGG:Phep_1535 NR:ns ## KEGG: Phep_1535 # Name: not_defined # Def: LmbE family protein # Organism: P.heparinus # Pathway: not_defined # 74 184 1 114 213 64 32.0 4e-09 MRKRNKRKYHLRIAAVVILLLAITNTATYRITEQYIQGKENVKEIAYKGSNTVSIKNVTK KLNPASFKIDRQLVKQIKNVMIIAHPDDETLWAGDHIMKDRYLIICLTNGNNKIRKKEFE KAMELTGNYGIILNYPDNPKHVKNNWKKVKDPIRNDIDYVLNYKKWDSIVTHNPDGEYGH IQHKFTSMIVTNECVKLGLTGKLEYFGKFYKTNYLLNHTIPGALDLQDAQAKENLMSEVY LSQGYAHRIFNHMVPYEKFIRYKDWYFGF >gi|312953855|gb|AENW01000059.1| GENE 29 39127 - 40128 886 333 aa, chain - ## HITS:1 COG:lin2050 KEGG:ns NR:ns ## COG: lin2050 COG0240 # Protein_GI_number: 16801116 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Listeria innocua # 2 330 5 334 338 301 49.0 1e-81 MKAVVVGSGSWGTGLAQVLCDNNEDVMIYGNCESEIRDINENHQNAKYFAGVELNPALKA TTDIQVVKDADVIVLSIPTIAVESVCKEIDALLDHKVVVVNTSKGFHPETFDRMSDVIRR NISAEHLSSVVSLIGPSHAEEVVIRMLTTICAVSQKEADAQKIQKLFSNDYLRIYTGTDE IGSEIGVAVKNAIALASGVLYGLGYGDNTRAALITRGLMEMTRYGVALGGKKETFMGLTG IGDLIVTCTSKHSRNFQAGYDIGKHNSAKYFWDNNTKTVEGVRTAKAVHENAKRLGIDMP IVNEIYQVLFEDKNPEDSARDLMLRDLKSEINF >gi|312953855|gb|AENW01000059.1| GENE 30 40231 - 42090 1984 619 aa, chain - ## HITS:1 COG:BS_glgB KEGG:ns NR:ns ## COG: BS_glgB COG0296 # Protein_GI_number: 16080150 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Bacillus subtilis # 9 616 14 627 627 526 43.0 1e-149 MKNKIMDRYYKGCALDAYELFGAHLCEERGKKGVRFTVYAPHAQGIQVIGSFDDWSCKGH QMRRKDDKGIWSLFVAEAKEGDMYKYRVTQATGRIVDKMDPYAFYSELRPNTASIVTNLD YKKWSDEKWLAQRTKNFDKPVNIYEMHLGSWKKDEDQEWVNYKDIAKELIAYVKENNFTH IELMPLNEYPFDGSWGYQCSGYFSATSRYGSAQELMYLINACHRANIGIIMDFVPVHFVR DDFSLSYFDGTPLYEYEKACDADSQWGTANFNLWREEVRSFLMSAAAFWIDKYHVDGLRM DAISNIIHWHGNKDLGENEGALHFIKRMNYHLSEAYKGVMLIAEDSSDFANVTKATQDGG LGFDYKWDLGWMNDTLKYLEKDPIYRKWHHNNITFSMAYFYSERFIMEFSHDEVVHGKKT IVDKIWGSYEEKFAQLRTLYLYMFTHPGKKLNFMGNELAHFREWDEEKQCDWDLLKYPMH DAFHRYFAKLGELYSKTPALYETEYDWTSFQWIDADNADENMFSYLRKNENSYYIVILNF SPNAYKKHAFGVPEKGVYHELLNTEQDIWGGEITELGKMKAVEKECNKLPYTIEVDVPAF GGVLLELKKSKKPVKKAVK >gi|312953855|gb|AENW01000059.1| GENE 31 42357 - 42440 85 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLSLLALTILTIALLSTRNYLLHSYR >gi|312953855|gb|AENW01000059.1| GENE 32 42493 - 44187 2134 564 aa, chain - ## HITS:1 COG:BH1106 KEGG:ns NR:ns ## COG: BH1106 COG1109 # Protein_GI_number: 15613669 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus halodurans # 6 563 7 574 578 521 46.0 1e-147 MVKDIYEKWLNHPNLDPSYKEVLEQMDEGQINDAFYTTIEFGTAGMRGLLGPGTNRINLH TIRKANVGFAEYICANGEDAMKRGVAIGYDNRHMSKEFAMDSAKVLATYNIASYVFESLR PTPELSFAVRHFNCFGGIMVTASHNPKEYNGYKLYDEKGCQLVPALAQQVIDRVNAVEDE LAIMAEPSAEQEKLITVIGKDVDEEYYKNVLSIQLNPDINKDDVKIIFTPEHGTANIPVK EVYTRAGYHFVAVEEQCSPDPDFSNTPTPNPEEAGSYELAIEYAKREDADIILVCDPDAD RMGVGVKHDGEYKLLTGNQSGAVLIEYIFSQLQAKDRMPNNPVMFNTVVTSDLGEKIATK YGVATEKTLTGFKFIGEKVAKYEITNEKQYVFGYEESYGSLIKPFVRDKDAPQACLMLAE AACYYKAKGKTLVDVLYDLYAELGFYEESQTSLKLEGQAGAQRIQEILATLRKTSVEIIN DVKVIRFEDYKESKIIENGKEEELCGFTKSDVLKYYLEDGSWIAIRPSGTEPKCKFYYCI KGTSLDNAHEKTLAFQNAMAEMIK >gi|312953855|gb|AENW01000059.1| GENE 33 44634 - 44801 59 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEVSLKKQYTAVVRMQEYHFWWNAGIFYRMYLTCILIIDEDAVSSRDSNVRKPYP >gi|312953855|gb|AENW01000059.1| GENE 34 44875 - 45141 286 88 aa, chain - ## HITS:1 COG:BS_ptsH KEGG:ns NR:ns ## COG: BS_ptsH COG1925 # Protein_GI_number: 16078454 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus subtilis # 1 84 1 84 88 82 52.0 2e-16 MKQITVSVIDPVGLHARPATVAVNAASKFKCEVNVSFKGREVNMKSIMGVMSLGIPTQSE ITISCNGDDEDAAIAAIEEVLRAQKIIG >gi|312953855|gb|AENW01000059.1| GENE 35 45269 - 45718 545 149 aa, chain - ## HITS:1 COG:FN1602 KEGG:ns NR:ns ## COG: FN1602 COG1683 # Protein_GI_number: 19704923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 143 5 148 156 116 42.0 1e-26 MKYAVSSCLLGVNCKYNGGNNASSELIDYLKEHEVLQVCPEVLGGLPTPRACAEISGEYI MNTEGEDVTAQFKKGAALALAQIHEFQPDLVILQPRSPSCGKGIIYDGSFQNRLVEGDGM FARLLLDEGIPVMTCGEFLEEVKPLSTKG >gi|312953855|gb|AENW01000059.1| GENE 36 46191 - 46634 465 147 aa, chain - ## HITS:1 COG:SSO2192_1 KEGG:ns NR:ns ## COG: SSO2192_1 COG2105 # Protein_GI_number: 15898969 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sulfolobus solfataricus # 12 141 1 124 187 65 36.0 2e-11 MSKRQEAPSVRMKLFVYGSLRMGLYNYELYLKGKSQFLGYGYVIGELYSLKERSYPALLP GNSRILGEIYEVDEAAARAVDALEEYVPGSSENEYEKINTQILDEQGRQLDILPVYWYHV EKPGNRELLDEIIQEHDFTAYCKAKAN >gi|312953855|gb|AENW01000059.1| GENE 37 46603 - 47244 681 213 aa, chain - ## HITS:1 COG:FN1728 KEGG:ns NR:ns ## COG: FN1728 COG2039 # Protein_GI_number: 19705049 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Fusobacterium nucleatum # 2 213 3 214 214 282 66.0 3e-76 MKILVTGFDPFGGEPINPAIESVKLLPATIEGAEIIKLEIPTVVHKSLQVIREAIQKHDP DMILSIGQAGGRSDLTVERVGINIDDCRITDNEGNQPIDEPVFADGDAAYFSNLPIKAMV NEIRKNKIPASISNSAGTFVCNHVLYGVRYMIEKEFAGKKSGFIHIPYLPQQVVDKPGQP SMALEVIVKGLTCAISAMIHNETDVKTTGGTIC >gi|312953855|gb|AENW01000059.1| GENE 38 47260 - 48195 1071 311 aa, chain - ## HITS:1 COG:SPy0507 KEGG:ns NR:ns ## COG: SPy0507 COG3817 # Protein_GI_number: 15674612 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 5 311 4 307 308 239 45.0 5e-63 MTDFLTNIAPEIFYALCGLVCLDAGWRAFRKNDKAKYGTALFWVLVGVIFILGKWIPSTI TGGILVVMGILTVSGQVRIGTFRDVSVEEKEKESRRIKSWIFLPAVTVGLMALVMSFVRI DGAALDGAVMVGIACLVSFVLAVIICRPKVNETRENTTKQLMQVGASCLLPQLLGALGTL FTEAGVGDVISTMISSVVPSGNILIGVIIYCLGMVIFTMIMGNAFAAFSVITLGIGIPFV IAQGGNPVVVGALGMTCGFCGTLLTPMAANFNIVPTAVLETRNKWTVIRAQAPMAFAMIV VHIVLMLLLAF >gi|312953855|gb|AENW01000059.1| GENE 39 48188 - 48865 836 225 aa, chain - ## HITS:1 COG:SPy0508 KEGG:ns NR:ns ## COG: SPy0508 COG3819 # Protein_GI_number: 15674613 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 180 1 180 227 187 53.0 1e-47 MEYLKLIGIVIIVLGFALKFDVLATVLLAGLVTGIVAGMDIPHILSILGESFVSNRLMSI FLIIFPVIAIIERYGLKERAAYLIGKIKNASAGKVLAIYMLVRTAASAFNVRIGGHVQFV RPLILPMSEAAAKVSKQSDLSENEVEELKGHAAAVENFGNFFAQNCFAAASGVVLIQGTL SMYKEVTLPSIAMASIPVMVITVAFTFVQVFLFDRKVKKAGARHD >gi|312953855|gb|AENW01000059.1| GENE 40 49014 - 49760 672 248 aa, chain - ## HITS:1 COG:RSc2009 KEGG:ns NR:ns ## COG: RSc2009 COG3022 # Protein_GI_number: 17546728 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 247 1 255 257 167 38.0 2e-41 MKIMLSPTKQMKPVNREPLQLPHFINDSEVICERLKQLSADELRTLMKINEKIAVENVQR YQNMTFSLAGSPALYTYNGLQFKHMGVENFSQEDAAYAQNCIRILSGMYGVLRPMDAIQP YRLEMQTRLPIGECRDLYAYWGDRLAHFLLQEEGEKPCIINLASKEYSKAVYPYLCEEST YTVTFLIEKAGRLKTESTQVKMARGAMVNWIITQRISTAEELIAFHADGYAYHKELSKAQ ELVFMKRK >gi|312953855|gb|AENW01000059.1| GENE 41 50070 - 51254 1447 394 aa, chain - ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 17 372 11 378 383 159 32.0 6e-39 MFTEKNKKINRLTLKHVLFLITYTIALIWIMLHLNEVFDTVSMIIGMLRPFIYGIMMAFV FNIPMKFFLKKLPDNLGRWKKALAAVCSLLIIFGILAFIVRIVMPQVIESIASLANSLPG YIEDAQKTITSMIEKQQIPQDVLKQVDTYSAQLQDTLVNLLKNGIPHLLTMASGFASSLA NVFMALVIAVYLTVSKDKLLEQSHRFLYAFTSSRANAFVLRVAHLTNTTFSAFITGQLVE AVIIGVLCYIGCLVLGFPYAPILGVIIGCTNIIPIFGAIFGVVLCALLVAFVNPLQGVFF VIFGICLQQFESNLIYPRVVGTSVGLSGLWVLFAITVGGGLFGFAGMLLGLPTFSVIYSL LREEMNRRVRLKRENSSVELPVSEDLPEQSEDMI >gi|312953855|gb|AENW01000059.1| GENE 42 51270 - 53246 2567 658 aa, chain - ## HITS:1 COG:BS_uvrB KEGG:ns NR:ns ## COG: BS_uvrB COG0556 # Protein_GI_number: 16080570 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus subtilis # 6 656 5 658 661 836 65.0 0 METKLFDLVSDYQPQGDQPKAIQELVDGIQKGKKQQVLLGATGTGKTFTISNVIAKVNKP TLVFAHNKTLAGQLYSEFKEFFPNNRVEYFVSNFDYYQPEAYIPSSDTYIDKNATTNMEL DMLRMAAVNSILERRDTIIIASVACIYGASNPEQYREMFFSIRVGDIIDRKELMGKLVAR QYTRNDMDLLRGTFRVRGDVIEVAPGHTDSFILRIEMFDDEIERICEVDPLTGKVLNAYT VYVVYPASGYATKQEIINRAANTIEEELADRLQVLENEGKLLEKQRLEQRARYDIEALRE FGVCPGIENYSRHIDGRKPGERPYTLFDYFPDDFLLVVDESHVSLPQIRGMYNGDRARKE TLVNYGFRLPSALDNRPMRFEEFEKMINQAIFVSATPGNYELEQTKGEIIEQIIRPTGLL DPVVTVRPTQGQIDDLVDEIRTRIEKNERTLITTLTVRMAEDLTSYLKGMDFKVAWLHHE VKTIERTEIIRDLRKGKYDVLIGINLLREGLDIPEVSLITILDADKEGFLRSERSLIQII GRAARNAHGQVIMYADKITDSMQKALDETARRREIQIAYNEKHGITPKTIIKPIHEVVRS KETQEMTAKYIGKKAKVSKKDKEKLLANLEKEMREAAKVLDFERAAELRDILLELRNS >gi|312953855|gb|AENW01000059.1| GENE 43 53236 - 54717 1757 493 aa, chain - ## HITS:1 COG:lin1965 KEGG:ns NR:ns ## COG: lin1965 COG0793 # Protein_GI_number: 16801031 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Listeria innocua # 53 489 62 494 496 213 33.0 6e-55 MAEKKVVRYKLVRHKWPDEIQAEKKRRQRRMCIVATCIVCFFGGFFLNSTLHQTAAASRD EFQKLEEIYSIMSDKFYFGKNQKNLNQKLIDGAISGLVDAGGDIHTSYLDNEQTESFTGS MEGSFVGIGIQFYGVDDSTFIIDEVLKNSPAEGAGFLMGDQIYAIDGTVCRNMTTSDVKA LITNSKSDEITLEIIRENRHKKIKVKKATVQDSVYSSVNGKTGILELDTFAETSGEEVKS HLESLKKDGCENLILDLRDNTGGYLKSAQEIASYLLPDNTVIFREETKDGTKEDYKTISG YEQYKYKKIVVLVNGDTASAAEVLTAALREHLGATVVGEKTYGKGTVQVPLTFKDGTMFK YTTAEWITPKGEKINGKGITPDVQVKLDEAFYTSAPVLKKEVYKPDTVSAAAKSAQIYLK FLGYAVDRTDEYFSYASGEALKQYQKDKGMKVTGNIDADTLTSLLSSCALKWHSEEAVLD TQMKKAVELTNGN >gi|312953855|gb|AENW01000059.1| GENE 44 55035 - 55937 1104 300 aa, chain - ## HITS:1 COG:lin2649 KEGG:ns NR:ns ## COG: lin2649 COG2177 # Protein_GI_number: 16801711 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Listeria innocua # 5 297 3 293 294 216 38.0 6e-56 MIRFFKAFPKFIKTAFLSIFRHIAMSLSASSAVTITLILFSAFLMIAGNVSLFTNSIEDD LQIHVVLKADVKTQKKIDEAKDGLEKISGVRRVTFSDKDNELELMIKEKGKEFEMYRGKD NPLCNAFFVSVKDANQIKAINAQIEQLPFVKQSVYGGNSVSKMISVLNTIRSGGLVFVGL LTLLALFLISNSIKLTIYARNAEISIMRNVGAANWYIKVPFMIEGMLIGLMGAVLPCIFT YFGYQYFFDMLNGQIITSLFTLQPIMPFTLQICGILLLGGMLVGLVGSFFSTTKYLRWKR >gi|312953855|gb|AENW01000059.1| GENE 45 55930 - 56619 367 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 217 1 218 245 145 36 6e-34 MIVMENVSKEYKNGVHALRDINLAIDDGEFVYIIGPTGSGKSTLIKLLDGEEIPNSGTVM VENINVGKLKHSRVPVYRRNIGVVFQDYRLLPRLTIFENIAFALEVIGMKKVDIRRRVRE VLELVSLEDKAKAFPNELSGGQQQRATIGRAIANHPKVLIADEPTGNLDPDKSAEIMELL EKINEVEKTTVVMVTHDSTIVDRFKKRIICLEEGYVVADIMKGGYLKHD >gi|312953855|gb|AENW01000059.1| GENE 46 56681 - 58078 1266 465 aa, chain - ## HITS:1 COG:Cj1087c KEGG:ns NR:ns ## COG: Cj1087c COG0739 # Protein_GI_number: 15792412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Campylobacter jejuni # 213 413 55 249 300 67 27.0 5e-11 MKMKKLMITGCVAAMLFLVPSQKNSWLYAADFEGNEEAWLNKCSVAQESEAAAQQCAAFK EYYAGLSSSLEGEVSSLDKKISAIKSNIEEITSVMKQLQSLIDKLDKNIEINKANIRTIE GQISKLNVEIKKKQKDIDQRNKIITDRMLDEQAVTGTNMDVEVIMGSKDLVDMIRKVDGL QRITDSDQVEIKKLQKDKAELDHQKSEKNRLKADVEAKKAENEKNKKETEKVQKQKKKLL EEYRKQEAELNEKMRSVQVDIASIQNNIININTSVAGKLDFSGNGALMMPVRGGSVSAGT WYYPDGGVHLGLDIATSIGTSLVAPADGIILYADNPAPTNGGFLNNWIGYPAGGGNTIQM LTQAGGTTYAISFFHLSREGFAVSGGSQVKKGQLLALTGHSGNSTGPHCHIEVINLGKMS ISSAISQFRSSADFAWGCGWGNGALSRTCGVSGAPCREKPENIFG >gi|312953855|gb|AENW01000059.1| GENE 47 58075 - 58971 806 298 aa, chain - ## HITS:1 COG:lin2649 KEGG:ns NR:ns ## COG: lin2649 COG2177 # Protein_GI_number: 16801711 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Listeria innocua # 6 295 4 293 294 211 35.0 2e-54 MISFIQSLPKHFMTALRNLGRHMAMTLSSASAVAVTLTLMTLFLVLAANMNSFADHVETN LKIHASIDSLQKQDEIEHMEKLIKGISGVKTVEFSSKEDELNILIEESGSVFERYKERNP MPNVFIVEVEKATDIPQITKTLNNMEGIEKAQYGGESIQDMIDTFETIRYGGAVFILALG VLAIFLITNTIKMTIYTRQTEISIMRNVGAGNWYIKTPFMFEGMLIGMIGALIPVILTIF GYGFLYDFFGGQFMSSMFVMQKPYPFTLQIAGVLFLSGAVVGIIGSFLAATKYLRWRR >gi|312953855|gb|AENW01000059.1| GENE 48 58964 - 59653 332 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 217 1 218 245 132 36 7e-30 MILLKNVSKSYRNGVHALRDINLEIDEGEFVYIIGPTGCGKSTLIKLLDGEELPDAGEVY VAETNVGKLRHSRVPFYRRNIGVVFQDFRLLPKMTVFENIAFALEVLALDKVTIRRRVRE ILELVSLQDKAKSFPDQLSGGQQQRATIARAIANHPKVLIADEPTGNLDPEKSMEIIELL DKINKVEGTTIVMVTHDSTLVNTYKKRTIALEDGFIVADIAKGGYIHHD >gi|312953855|gb|AENW01000059.1| GENE 49 60265 - 61131 954 288 aa, chain - ## HITS:1 COG:CAC0848 KEGG:ns NR:ns ## COG: CAC0848 COG1284 # Protein_GI_number: 15894135 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 282 8 285 292 170 35.0 3e-42 MQNHNKKDQIIEIISIVMGNLIIAAGVTFFILPLDILSGGVAGIAVALQPIFNLSPRLVI NGLTIGLYLLGAALLGKRFALKTVVSTIVYPLFISVLGMLWSDVQVTSNPLLASIYAGVC TGIGIGLVYRVGGSTGGMDIPPLIINKYTKIALPTLVMCIDGATVLLGASVYGVEAAMIG LVSVWVCGQLIDKVITMGSHEAKNVMIISDKFEEMMQVIYQNINRGATILHAEGGYTRTS KPVIMMVVVKKQFSELNHIITEVDPEAFVIVSDVNEVQGEGFTYQEQL >gi|312953855|gb|AENW01000059.1| GENE 50 61933 - 62298 250 121 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1764 NR:ns ## KEGG: CDR20291_1764 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 121 14 134 134 243 99.0 1e-63 MLYTEKEKHEIERVKEVFAEHLRQSPDFELLWSDKVGYVWLAIGVNPVYVDTGIRIESAA DLCYRCLDDVATDVLYMTGNDHALEAADPLELAEIKRRWEPYINQLPDYAYLCKDLLNGK M >gi|312953855|gb|AENW01000059.1| GENE 51 62376 - 62549 121 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|210612983|ref|ZP_03289548.1| ## NR: gi|210612983|ref|ZP_03289548.1| hypothetical protein CLONEX_01750 [Clostridium nexile DSM 1787] # 1 57 25 81 81 87 96.0 2e-16 MQVADAATASRAPENTPAMVKKIGKTTYKVHVHFSNTSTETMSDKIKRMLKNEIQQM >gi|312953855|gb|AENW01000059.1| GENE 52 62614 - 63477 768 287 aa, chain - ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 36 282 27 281 282 142 31.0 6e-34 MIEITAEIRALIDKAAAGVELAGDEYIDPADGLIHCKKCGGQRQTVVPCFGKSGYFMPRC ICQCQREAEEQRKAAEERQRRMERIKRRKAQGLQDRYLYDYTFANDNGKNPLMDKARAYV ENWKEAYKNNTGLLLFGDVGTGKSFFAGCIANALLDRDVPVLMTNFPTILNRLTGMFSED RADFIASFDEYDLLIIDDLGVERSTEYAMEQMFFVIDSRYRSRRPMIITTNMKLSELKNP PDLAHARIYDRILERCAPILFDGKNFREENAGATRQAAKDIVNSKQD >gi|312953855|gb|AENW01000059.1| GENE 53 63474 - 64208 369 244 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1762 NR:ns ## KEGG: CDR20291_1762 # Name: not_defined # Def: phage protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 244 1 244 244 403 97.0 1e-111 MSDNRKYYYLKLKENYFDDDSIVLLESMQDGVLYSNILLKLYLKSLKHGGRLQLDEDIPY TAQMIATITRQQIGTVERALQIFLKLGLVEVLDSGTFYMSNIELLIGQSSTEAERKRAAR LQNKALSAPRTNGGHLSDIRPPEIEIEIEKEIEIKREIEKGRSARAYGRYQNVFLTDEEM ADLQASFPTVWGQYIEKLSEYMASTGKRYQSHAATIRRWAGEDAKKAGTPSRNRDYSVKE DETV >gi|312953855|gb|AENW01000059.1| GENE 54 64322 - 64720 202 132 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1761 NR:ns ## KEGG: CDR20291_1761 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 132 1 132 132 234 95.0 7e-61 MKNNKSEPIPVMDYRQYRRVRRLVHECCNYIDGNCIALDDGEECVCVQSISYSLLCRWFR AAVLPQDKELETALFHRLNAKKCAICGALFTPGSNRAKYCPECAARMKRINAAKRKRKQR EKCHALGAEKPL >gi|312953855|gb|AENW01000059.1| GENE 55 64847 - 65125 351 92 aa, chain + ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 7 59 5 57 87 58 50.0 4e-09 MAGNTTNISIRMDADLKAQADALFTELGMNLTTAFNIFVRQSLREGGIPFEVRLEQPNKE TVAAMLEAERIAKDPSVKGYNDLDELFADLKR >gi|312953855|gb|AENW01000059.1| GENE 56 65122 - 65412 275 96 aa, chain + ## HITS:1 COG:SP0276 KEGG:ns NR:ns ## COG: SP0276 COG3041 # Protein_GI_number: 15900210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 8 94 4 92 92 94 52.0 5e-20 MKETKYTVKYTTSFKKDYKRAIKRGLKIELLEQVVALLAMGEPLPDKNRDHDLSGDWAGH RECHILPDWLLVYRIEDDVLVLTLARTGTHSDLFGK >gi|312953855|gb|AENW01000059.1| GENE 57 65520 - 66845 453 441 aa, chain - ## HITS:1 COG:mll0964 KEGG:ns NR:ns ## COG: mll0964 COG0507 # Protein_GI_number: 13471082 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 2 221 39 239 1015 144 40.0 4e-34 MTHDYTRKGGIVHAEIMLPAHAPPEFADRSILWNSVEQIEKARDSQLAREIEAALPRELS GEQQLALVRAYVKDNFVDKGMCADFAIHDKGTGNPHVHIMLTLRPLKENGQWGAKCRKAY DLDENGQRIPDGKGGWKNHREDTTDWNDKGNVEIWRAAWAAYTNRALESAGRPERIDHRS YKRQGIDKIPSVHLGPAASQMEKRGIRTDKGEVNRQIAADNKLLKEIKARITRLYNWSKA EAEKPEGQQPSMIDLWEAQQQLKRPDTRTGKIRALQESAALFSFLQANGIQSMQQLHEKI ADMNTRYYDLRGKIVKAERRIAILTERGEMWEQYNQYKSIHKQLAKVKPEKREQFEQRHS RELILYDAAARYLKELKDSGEAITPKAWQWEIDQLTAGKQTDTLAMKSMREDLKAVERLR KTAEQLSRQERDKSHDRGPER >gi|312953855|gb|AENW01000059.1| GENE 58 67153 - 67443 348 96 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1757 NR:ns ## KEGG: CDR20291_1757 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 96 4 99 99 150 98.0 1e-35 MDEKITAHPQKEEREKVLKEIRQLENRKKILENKQRNEERRVRTRRLIERGAVLEGIFPL APDLSGAEVKAFLIALSHLPGAAELTANLPKSGDTP >gi|312953855|gb|AENW01000059.1| GENE 59 67471 - 67932 338 153 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1756 NR:ns ## KEGG: CDR20291_1756 # Name: not_defined # Def: rna polymerase, sigma-24 subunit, ecf subfamily # Organism: C.difficile_R20291 # Pathway: not_defined # 1 153 13 165 165 276 99.0 2e-73 MQTINLKQYYPFCKEDIFVEVSDEIVEAFLLDKRAEAARERKMFRYKAFYSLDCNDGIEN AAIGWAQPSPEDYLIEKEELAEYEELIRRLYEAISSLPPMQARRVHARYMLGMKVKDIAA MEGITPSQAGKSIHAALRRLRRYFARQKWTVNL >gi|312953855|gb|AENW01000059.1| GENE 60 67943 - 68395 275 150 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1755 NR:ns ## KEGG: CDR20291_1755 # Name: not_defined # Def: sigma-24 (FecI) # Organism: C.difficile_R20291 # Pathway: not_defined # 1 150 1 150 150 255 92.0 3e-67 MKTINLRWMYPHYRHDEFVDVTDEIWTAMYQAQRKMENYERRKVYHCAYYSLDAYSWLEN YALEHSRSPEDILLEREEMTTRLHLIAALPVALAHATPAQARRVYTYYMGGIKQPEISRR EGVHSSKVSVSIRRGLRNMRRCYDDLFQTE >gi|312953855|gb|AENW01000059.1| GENE 61 68499 - 68912 355 137 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1754 NR:ns ## KEGG: CDR20291_1754 # Name: not_defined # Def: rna polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily rna polymerase sigma-70 factor) # Organism: C.difficile_R20291 # Pathway: not_defined # 1 137 1 137 137 254 97.0 9e-67 MEVTINYNGQAVAVEVTLEVYEFLDRADHKTENLFHEQRRHWDGREFDEYIITTEGVGVY GETPEEYLCRMETLHELMAVLDTCTEAQRRRFLLYALDGLSLAEIGVLCGCSKVAVYQSV EAVRKKFINFFENRLNE >gi|312953855|gb|AENW01000059.1| GENE 62 69388 - 69759 257 123 aa, chain - ## HITS:1 COG:CAC1469 KEGG:ns NR:ns ## COG: CAC1469 COG1321 # Protein_GI_number: 15894748 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Clostridium acetobutylicum # 3 116 1 115 122 103 49.0 6e-23 MKLHASGEDYLETILVLQKKLGMVRSVDVAQHMEVSKPSVCHAVATLRDGGFLTMDEDHF LHLTDVGCEVAEKIYERHCFFTEQLIAAGVDPKTAEADACRIEHIISDESFSRLKEVAEQ EQT >gi|312953855|gb|AENW01000059.1| GENE 63 69762 - 71261 348 499 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 477 8 499 563 138 27 1e-31 MIEFKDVAFQYEQGSSKGKIENINLTIHDGEVVLICGESGCGKTTLTRLINGLIPHYYEG TLTGQTIVEGIDVKNVSLYALSGVVGSVFQNPRTQFFTVDTTSEIAFGCENLAIDADEIN SRIEKTVGALKIEDLLNRSLFALSGGEKQKVACASVSAMEPDIFVLDEPSSNLDIKSIRE LKDVLRKWKAQGKTIVIAEHRLYYLMDIADRILYMQGGQIKENLSISDFKKKSTGELHAL GLRTLQSEDFSKMQSTVCATKQLYIRDFEVSYKNASGGKKKKRKVLDISDLMIPQGSVVG VVGNNGAGKTTFANNLCGLLKTAKGCMSMNGKTYMANQRIKTCYMVMQDVNHQLFTESVM DEILLSLDNSDEEKAAHEAESIMESLHISEFRDAHPMSLSGGQKQRVAIASAIASDKQVI VFDEPTSGLDYRHMKKVAENLRELSSLGKTLFIVTHDPELIAECCNYFVFIENGKVLWSD GWNRISRERLQRFFAFEGD >gi|312953855|gb|AENW01000059.1| GENE 64 71272 - 72000 346 242 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 17 228 3 212 226 75 28.0 1e-13 MKPELLLSVDSERRFWLDPRTKLYMLVIFSIVMIDGKTDGISFWLKPILALVTFFLLLSG SRKKVAIIYLIVFVVSWMVNIFLVPYMGLIGTIIISLLAQFGTRWFPSAMMGYYLLSTTK VSEFVLAMQRMHIPEAFIIPFSVMFRFFPTISEEAGSIGNAMRMRGITGKNFFKNPQAVL EYRIVPLMMSVVTIGNDLSAAALTRGLGNGKKRTSICKIGFHWKDFALMIIVTAALLVFL LF >gi|312953855|gb|AENW01000059.1| GENE 65 72000 - 72587 544 195 aa, chain - ## HITS:1 COG:no KEGG:DSY4896 NR:ns ## KEGG: DSY4896 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 6 194 5 192 193 158 46.0 9e-38 MDKKKLNAKDFINIGIFTVIYFVMFFITGMLGYIPIFAVIIPLVLGILGGIPFMLFLTKT GKFGAATIMGTLVSVLCFLMGQSWISIPFGIVFGFLADLIFKAGEYKSWKHTVLGYCVFT EWVVGSMLPMWIMRDTFFEAYRSKGGTDEYINAVMGLTANWMLPVVIVLGLVGGVIGAYL GKAILKKHFVKAGIV >gi|312953855|gb|AENW01000059.1| GENE 66 72606 - 74354 191 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 336 557 7 226 311 78 27 2e-13 MIRSFRKFFEFAGRQSRNWYLGLFYEIIRCILEALQFAALLVVLDGLVRDNITAQTALLA FGIMLVSVIGTIIFWYLAHGKEGEGSYRMCEDKRIQIGNRMKYMPMGYFNSHSLGNLTSV STATMSDLESMSFAIIVRTLVGVIHASIFSVAMCYFSWKISLIFLAGVILFMVINTMLLR CSKRLSPVRLETQTEFMDAVLEYIQGMGVVRAFHMAKQSNTTLEKSIDETQKKNQLIERQ RIPYIAAEQVVLRIASAAAAFCSIALFINGTLELTYCLIILVSAFMIYSQLESAGEMFFM LSMIDASIDRVEEINQSPQIDIDGKEQAPDRLDIEMQDVSFSYGDKKVIDHVSLTIPQGT TTAIVGPSGSGKTTLVNLIARFWDVDSGSVRIGGIDVKDYKLDSLMKNISMVFQNVYLFP DTIENNIKFGSPNATHEDVVKAAKAARCHDFISALPEGYQTVIGESGATISGGEKQRISI ARAIMKDAPIIILDEATANVDPENEAELQKAIEALTQGKTIIMIAHRLKTVKNADQIIVI DRGKISQQGTHDELIKQAGIYADFVGMREKAIGWKIKADSLA >gi|312953855|gb|AENW01000059.1| GENE 67 74351 - 76099 230 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 339 559 2 226 245 93 30 5e-18 MDQSQGGNPFGRLIEFARPHKTGYIVSVVLAVLGVAFGIVPYFATARMTIELLSGNRDLS FYMVWCLISGGCFVLKAILMGISTRASHEATFEVLSEARRKIASKLTRVPMGYILNTPSG QLKNGMVERIEQLEVPLAHVIPEMTSNLLVPIAIIVYLFVLDWRMALVSLITIPVGMMCY MGMMKEYPKKYGEVVKAGNHMSATTVEYIGGIEVIKAFNQADNSYQKFTDAVHANADLIL DWMKDTQKYSAIMMSVWPAALISVLPVGCLFYMSGSLSAATFITVTVLSLGIAGPLVAAM FFTDDIAKIGTVMGEIDGILNQPELVRPERKCDLQNLDIALENVHFAYEEKEVLKGIDLT IPQGKITAFVGPSGSGKSTIAKLIASFWDVTGGLITIGDKSVKEISNDQLNDLISYVSQD NYLFNDTVRNNIRMGKPEASDSEVEQIAKDSGCHEFIMNLEHGYETVVGGAGGHLSGGER QRIAIARAMLKNAPIVILDEATSYTDPENEAVIQEAISRLTKGKTLIVIAHRLSTITDSD QIVVVKDGTIQAKGTHEELLKECSLYHTMWTAHMDAKEVKTA >gi|312953855|gb|AENW01000059.1| GENE 68 76416 - 77033 453 205 aa, chain - ## HITS:1 COG:alr0810 KEGG:ns NR:ns ## COG: alr0810 COG1309 # Protein_GI_number: 17228305 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Nostoc sp. PCC 7120 # 10 64 19 73 205 60 50.0 3e-09 MASRVEGFDEKILACAKEEFLEKGYTDASIRTIAQNAGVSTSTIYTRYSDKEGLFRFLVE PAAKGLKELLRQSFSDFSSLTGHEQNEKFMEYSDRGFEAVIAYIYEYFSEFKLLITGAPG NYYQEFLEGLVQLDTDCTKKFLIQVGSKALAEGRVTDGFLHVVSSAFYSGIFEVVIHDMP MKEAKNYINELRTFYGNGWKEYYRK >gi|312953855|gb|AENW01000059.1| GENE 69 77222 - 77578 339 118 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1745 NR:ns ## KEGG: CDR20291_1745 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 115 1 115 117 171 76.0 8e-42 MNELTYTRCGDYYIPDLKLSEQPEAPIGKYGRMRRRYLKEHRPGLYSSLILSEKLYPHLL EIDRAAHERMDAMLPRMMEAAGVTEELKACDPMRWVGLMNTLKAQVEEILYSELILEN >gi|312953855|gb|AENW01000059.1| GENE 70 77605 - 79485 1227 626 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 4 297 6 301 301 282 52.0 1e-75 MRNEKITPLYERLSRDDELQGESNSISNQKQMLEDFARRNGLPNPMHFTDDGISGTRFDR PGFLAMMEEVETGRVEAIVIKDMSRLGRDYLKVGQVMEILRQRGVRLIAINDGVDSLKGD DDFTPFRNIMNEFYARDTSRKIRSVFKSKGMSGKHLTGTVIYGYLWDEKREHWLVDEEAA EVVRRIFSLTLEGYGPYQIACKLSADRIEIPAVHLARFNEGVNRSKPVKDPYGWGSSTIV NILKKREYLGHTINFKTRKHFKDKKSHYVSEDEWTIFENTHEAIIDQQTFDLAQKIRSNV RRYPNGWGEAAPLTGLLYCADCGGKMYVHRTNNGRRISQYTCSNYTKVPCGTLCPTQHRI NESAVLTLVSDTLRAIAEYSRNDRTEFIHTVQETQVAQQSADISKKRRRLAAAQKRAGEL EKLICKIYEDNALGKLPDARYRALDAQYAKEQDALEIEIAELEKAVTGYEQSQKSAEKFI ALIDKYENFDTLTNTMLNEFVEKILVHERSRKGSQDTTQEIEIYFNFLGRYIPPALQPVP LTPEEQEELRKKEERKDRLHQNYLRRKANGKQKEWEERYTAKRKAQVEAAKAAIRAEDME KGIFTTISQLPRQEPRKATLPASAAV >gi|312953855|gb|AENW01000059.1| GENE 71 79482 - 80930 678 482 aa, chain - ## HITS:1 COG:BH3600_1 KEGG:ns NR:ns ## COG: BH3600_1 COG3883 # Protein_GI_number: 15616162 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 55 283 42 263 325 64 21.0 5e-10 MLHKQKGFILALFAAGILFISNHDFMYAENFEGKEDEMNAKCEVIKNSETQGLCRQYKQY LQNKSNNLDNEIKEIKNQISKVKGNIDKIAPLIKENNEKIEQYDKQIHKVQLNIETMQNS IEDMNAKISEKENDIKERDQQMRERLIEMQAYTGSNYYIDFLMGSSSFVDLLRRTEIVGE LNTYENEQISILNKEKQKLNEDRAIVKEQKELLIEQQNNIKDDKLRVETLNNVKQELLNG YHKQESKLSAQKRQIQMAQTSLPKIDLAIAEEFDKPKKPDTAKPDNNTNNDIKKPDTQTP QEPVVPNQPNDTSNNDSFLVPLSYGWHYESGTWHYPGGGGHMGMDFSTGGTINIPVQAPA AGVILHTYSGCGNGYSNCGIPIGGGNNVLLLTKKGNTIYAMPFYHMTSIAVTPGQKVSQG QVLGYSGDSGWSLGNHCHVEIIRVGNMSMSEVIYALSDFLIMILSWLVKQSLRAFLFQEV QP >gi|312953855|gb|AENW01000059.1| GENE 72 81167 - 81682 74 171 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKIGKMVLMMMLAMPMLGINVTAATTENPDGRAVMNPCDDILQPGEYAQFSPRNSGMTS YRVDKVDAAKDLIYNNKLKAWLPAWSLTEVYQNSVGGTGSLDQILRVGEYFHPDGKFAQI HNLGFYVYANNASANTVKLKFKDKWGKDVYVWVNAGPLYEHNPNNKNGSCN >gi|312953855|gb|AENW01000059.1| GENE 73 82159 - 82833 519 224 aa, chain - ## HITS:1 COG:FN1417 KEGG:ns NR:ns ## COG: FN1417 COG0235 # Protein_GI_number: 19704749 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Fusobacterium nucleatum # 1 216 1 218 222 196 48.0 4e-50 MLMEKERQEIVDYGKKMSSAGLSKGTSGNISAYDPVCGYMAISPSGLDYFETAAEDIVIL DLNGNLIEGSRKPSSEHALHATIYKLHPDARGVVHAHSTYCTTFACLKQPIEAVHYLLAG AQTSCVPCADYATYGTEALAEKVSEATGEGLAMLLANHGMVACGPSLSKAFNVAENVEWV AEIQWRTMCVGKPAVLSKEEIDVVIESFKTYGQVEEGATGKGGY >gi|312953855|gb|AENW01000059.1| GENE 74 82849 - 84285 1146 478 aa, chain - ## HITS:1 COG:BS_yoaC KEGG:ns NR:ns ## COG: BS_yoaC COG1070 # Protein_GI_number: 16078916 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Bacillus subtilis # 2 471 5 475 487 316 34.0 7e-86 MKHYMIVDIGTGNSRVALVREDGALICVKTFENIYYIDEAYEDAQYFDPSFWKRNILGLC REIIHMYPNITIDAISSSGARESIVLINRKQEDFYGLPNIDNRGRAWMAEIQKDGIYEKT GRWVTEDFPAAKLMGLSKRRKEIFDQVQTFTSLSEWIGYVLCGKLAIEPSQACETQLYDI GAQQWSEELIKRFKLEQLTMPPLLNAGSLLGFMREDIKEQLGIAYDIPFLIGGADTQVAV LGAGMQEGDIAVVSGTTSPVVTLRTERYCDPQERCWTDSWLKGSMYQMETNPGVTGLNYQ RIRNLLFDGVSYEDLEAALKEVNNIKCTASFSSLDFEHACGYKNGGFFMRPPFRADLHRI DLAWALVGDIACSIFYQYRQLLQMLPIQHDKILGCGGGFQSDMLCQHLSDLTQKALVLPD HFHQASIMGCVAVCNSYWNIHTDTNERSYKIYKPQKGSLIQEYYEIWKTNRDRVNTTV >gi|312953855|gb|AENW01000059.1| GENE 75 84282 - 85271 1167 329 aa, chain - ## HITS:1 COG:BS_yoaD KEGG:ns NR:ns ## COG: BS_yoaD COG0111 # Protein_GI_number: 16078917 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Bacillus subtilis # 1 326 12 341 344 281 43.0 1e-75 MKVYVRAPMSEIRLRELQELFEEVVYDPWNKTGERFYEKEMLEALKTVQPDILITELDRI TEAVVSNYKGLKVIGDCRANPANIDIEACSAHGIPVLCTPARNATAVAEMLVGMLIAYMR KLLPATAWVRDGQWIEGTTPYYTWMGNELHGKHVGFVGFGAVGKAAAHLLDAFGCSISYY DPYVSDTPYTKCELQELFAACDVISIHLPVLPATEKLISRDLLYTMKPDAVFVNTARSAV VDMEALQDMAREKRIKGILLDVLNSEPPLPDDLKIIENDNVLLTPHICGATYEVTDHQSD IITERLKAWKKQEQLERIVYNYHSLKMPL >gi|312953855|gb|AENW01000059.1| GENE 76 85287 - 86339 1144 350 aa, chain - ## HITS:1 COG:FN1413 KEGG:ns NR:ns ## COG: FN1413 COG0182 # Protein_GI_number: 19704745 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Fusobacterium nucleatum # 1 350 1 349 349 418 61.0 1e-117 MERQDKGLAYLLQYEHVAWFENGMVRILDRRIYPSVIRYVECKDYREVVQAIRDMVTQSA GPYTAAGMGMALAAWQIRNADQKEQKEFLKTAAEDIATARITTANRYRVITSGCLQAAYA AIDRGENAVEAIIQRTLESLNRRYATMEKVAEYLVDQIPEKGRVLTQCFGETIVGMMCRV AQRRNRQVEFYHAETRPYLQGARLTSSVCHEMGFSSTVITDNMVAYAMENKGISLFTSAA DTIAGDGHIANKVGTMQIAILAKYFHIPYFVTGIPDADKRSKADIIIEERDPQQVLCYRG INNTLPGVQAIYPSFDITPPYLIDGVITDKGVYSAYDVAAYFEEDVSQFY >gi|312953855|gb|AENW01000059.1| GENE 77 86540 - 87745 1202 401 aa, chain - ## HITS:1 COG:FN1412 KEGG:ns NR:ns ## COG: FN1412 COG4857 # Protein_GI_number: 19704744 # Func_class: R General function prediction only # Function: Predicted kinase # Organism: Fusobacterium nucleatum # 4 380 3 381 384 410 55.0 1e-114 MNNYEHHMLLDVEEVKCYVTSKLQYFQKDEVLQAEEIGDGNINYVFRVWNPDSGKSIIIK QADKFLRSSGRALDVYRNKIEAEILKLEGMLAEGFVPKVYAYDETMCVLAMEDISAYKNM RKELMEGRFFPHFAENIAEFLARTLLPTTDLVLDRAVKKDNVRLFLNKELCDITEDLVLT EPYDNYKNRNIVLPENEEFVKEFLYENEQLKADVAQLRDSFMNHAQALVHGDLHSGSIFI NEQGIKIIDPEFAFYGPMGYDIGNVIGNLFFAWARIQFIEPRHTEFITWCSHTVADTIDL TMEKLSKVYEQCVECPLYRTKEFKQHYLRDVMSDSLGYAGTEIIRRVVGDSKVMEVTSIK ETDKRVAFERALLKMGIWLIRNRKVIHEGMEVSEQFNMICS >gi|312953855|gb|AENW01000059.1| GENE 78 87769 - 89100 1405 443 aa, chain - ## HITS:1 COG:FN1414 KEGG:ns NR:ns ## COG: FN1414 COG1757 # Protein_GI_number: 19704746 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 15 431 1 417 419 383 55.0 1e-106 MKNEKKGSFLGLLPLIVFLVAYMGTGLGTGSFDNMPLMTGIAIASGVALLLNKRDKKTPF EEKIALYCKGGGEETLILMVLIFLLAGAFGGVAKGMGAVDSIVNMGLTILPGNLILPGIF LIGCLLSFSMGTSMGTVAALMPIAVDISNKTGINVCLLAGAVVGGAMFGDNLSFISDTTI AATRTQEVSMKDKFKANILMVLPAVVINVILLAIQSGGDVSLGNIGSFSFVNIIPYILVI ALSLVGLNVVVVMIIGILSGVIIGCFNGGFTLIQSLTIIHDGAIGMEDMALIAVMVGGMV ELMKHFGGMDFLMNQLTKGAKSSRGGELSIAALVSLLDIATTNNTISIIAAGPIARDIAD NFHISRSRVASILDLFSSAFNGLLPYAGQLLVAGGLANVSPTAIMGYNWYSMLMIVFGIV FIIIGFPKFKDIRTKKEQVEKEA >gi|312953855|gb|AENW01000059.1| GENE 79 89436 - 90203 713 255 aa, chain + ## HITS:1 COG:BH1553 KEGG:ns NR:ns ## COG: BH1553 COG1349 # Protein_GI_number: 15614116 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus halodurans # 1 239 1 235 251 129 35.0 4e-30 MLKLERQLFIEKELHEKGSVLVSELSKVLDCSEETIRRDIKEMEAAGKLNKIHGGAYLPD KYDKGVPIELRESFFASEKEQMADKAVDIIKDHSVIMLDSSTTCLKLAEAIISSGKCITL ITNSLRISSLFHSQSSNVNLICLGGQLHRATASFTGYRTTDTLKQNFADITFISCPALHL QHGLSDNNLNEAEVRKHMLENSHYKVLIVDHTKFDSISDVLFYDLAGVDLLITDQPLSET WEEYCRKSSIEIIYS >gi|312953855|gb|AENW01000059.1| GENE 80 90222 - 91388 1050 388 aa, chain + ## HITS:1 COG:FN1415 KEGG:ns NR:ns ## COG: FN1415 COG1979 # Protein_GI_number: 19704747 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Fusobacterium nucleatum # 1 387 1 384 385 273 38.0 6e-73 MRNFTYHNPVRILFGDHALDQLSDLFREFHVSNLLLVYSGDFIKELGIWDAVRKACVQSG IAFYEEGGVVPNPKIELVRELITLGKEKKIDFVLAVGGGSSIDTAKAVAAGIPYEHDVWD FFEYAAVPETAVPVGVITTIPASGSECSNCSIISNGLHKCGIEYDCIIPKFAIMNSEYTR TLPAYQTSAGIADILSHMLERYFTNTEHVDTTDYMLEGTMQALMVNARRLMKKPDDIHAR SEVQCLAFIAHNNLLDIGRESDWGAHRIEHELSAQYGITHGEGMAVVTIAWARYMAAHHP DKLAQLASRIFGVDPFVYTKEDMAYILADRLEEFFRSLHLKTTLHEMGIDDAHFEEMANR ATNNGKDCVGHYVALNKQIFVDILKMAL >gi|312953855|gb|AENW01000059.1| GENE 81 91547 - 93277 1200 576 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_1190 NR:ns ## KEGG: HMPREF0424_1190 # Name: not_defined # Def: glycosyl hydrolase family 25 # Organism: G.vaginalis # Pathway: not_defined # 94 313 89 302 662 159 43.0 2e-37 MRKLLVTLLAAGLCLTGVHAQETENTDGTVTNTDTNEIKTVTADTYQPIGEMEGAENAAM GDGTPQQPQTQYRSRSANARLIAPVWGMNGTTKTFTYTKNGQSVVVENPKQVVDVSEHDG KINWEKLKSEGIDGAILRIGWGVGYTDEYFDYNISECKRLGIPYGLYLYSYAYDANFAYA EADSTIERLQGYDLTDMSYPIYYDIEAFKAYNHDGATRVPPKDVKTYESIIKTYVDKMNS AGYSGKVHVYSYRSYCQKQLNSAYILGLTSWIAEYGSYLAFDNPYYTGDSGWQYTSEADF EGITPENVDVSMFTNTLLSLQTQSPANLTATVEGTNIKLTWDKVPYNTRYRVYYQTTDDG EWNYLTSQTGTSYTFKTGTSGASYRFVVRTANLINGEYKFSQASFSNRLTYPQKKAQGFY NLSRRVRVFSSPNAANYNRYDPFKKKWMGSMKNYNNKPLLLTREYVNEEGTSYWSAYYNG KWIGYINSYALKNSVKKDTYFGWGDNNARVFNTPNPQKYWLYNAPADKWVKRMTGYRNQK FTIKRSLARADGSLYYSCYIGDKWIGYINSWGFQNQ >gi|312953855|gb|AENW01000059.1| GENE 82 93533 - 94516 1133 327 aa, chain - ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 6 327 44 365 366 418 64.0 1e-117 MTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSALIGLEETHDLLKEDYDDEIFELF EAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKK GFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFAS LDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVAICQNGRS QHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRT SCETSDVQGVMDGDLDAFIFAYLKTQI >gi|312953855|gb|AENW01000059.1| GENE 83 94633 - 96981 2823 782 aa, chain - ## HITS:1 COG:BH3606 KEGG:ns NR:ns ## COG: BH3606 COG0653 # Protein_GI_number: 15616168 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Bacillus halodurans # 13 781 14 786 838 829 57.0 0 MANFIERLLNGEKKTLHNLEKTAEQVMALANDMEALSDDALKEKTQEYKHRYEEGETLDS LLVEAFATSREAARRTIGEYPYKVQIMGAVAMHQGDIAEMKTGEGKTLTSTMCVYLNALS GKGVHVVTVNDYLAGRDAEWMGQIYRFLGLSVGVNSRPLTPSQKRDAFNCDITYTTNSEL GFDYLRDNMVTDVKDRVLRGLHVAIVDEVDSILVDESRTPLIISGGAKKTANLYLQADAF AKRLKGDDFEIDEKTRQIMLSEKGVSVAERYFKIKNLYDVDHTQLVHHITQALKANYIMK NEVEYVVQDDEIVIVDQFTGRTMPGRAYSDGLHQAIEAKEGVSIKEETSTLATITYQNFF RLYDKLAGMTGTAKTEEEEFLDIYNMRVIEIPTNRPVQRIDYPDAIFANPRLKFAALVKE VKELYEKGQPVLVGTISVETSELVHELLRKERIPHEVLNAKNHAREAEIIAKAGRPKSVT IATNMAGRGTDIKLTDESRALGGLVVLGSERHESRRIDNQLRGRSGRQGDPGYSRFYVSL KDELMIRFGGDKFEKLFESMGDAQIESKMVTKSISQAQKRVEGYNYDVRKQLLDYDDVLR KQREIMYEQRNFVLENEDVHGIVRDMIDRVIDSVVDANVDHTRHDESVDYAGVLQGLELL GLEEKDNLKLEEIQGKEKNDVTTYCAEKIFTLYDDKIKDIRDEFKQFEKTIVLRNMDRNW IEHIDMMDKLRNGIHLRSYAQNNPLQAYIQEGYEMFEEMQARIAREVVFFALKVQVERKV EN >gi|312953855|gb|AENW01000059.1| GENE 84 97294 - 98049 551 251 aa, chain - ## HITS:1 COG:no KEGG:BC2635 NR:ns ## KEGG: BC2635 # Name: not_defined # Def: triple helix repeat-containing collagen # Organism: B.cereus # Pathway: not_defined # 22 108 63 154 295 72 59.0 1e-11 MLYDENEYYDSCDCCCDCCCEGPRGPRGFRGATGSIGPTGPTGIGITGPTGATGVTGSTG ATGPAGIGPTGPTGATGNTGSTGPTGPEGSGADCLCVQQMINILLQIIQLYPNDTVVVAM ESGNNASGRAGSLLPSPDYGLLQLTNAQGVPQEAVSICRIASVRITSAVYNEAITYLPAP VPAPTGCSAACENAVRSYLPVGTSGVDINAGGQTVGQGTVIRNEFAMVVLVGPNNSDPTF VSACKAEIITK >gi|312953855|gb|AENW01000059.1| GENE 85 98204 - 98401 228 65 aa, chain - ## HITS:1 COG:BH3610 KEGG:ns NR:ns ## COG: BH3610 COG1278 # Protein_GI_number: 15616172 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Bacillus halodurans # 1 64 1 64 65 72 59.0 2e-13 MRGKVKMFNQEKGYGFITLEDGKDVFFHYSQLMMEGFKTIDADAEVEFDLVETDRGLQAH NIVKA >gi|312953855|gb|AENW01000059.1| GENE 86 98731 - 98928 264 65 aa, chain - ## HITS:1 COG:CAC0807 KEGG:ns NR:ns ## COG: CAC0807 COG1278 # Protein_GI_number: 15894094 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Clostridium acetobutylicum # 1 65 1 65 65 80 63.0 5e-16 MKGKVKWFNAEKGYGFINGEDGKDIFVHYSHIQQEGYKSLEEGQEVTFDTVDSDKGLQAR NVEKA >gi|312953855|gb|AENW01000059.1| GENE 87 98956 - 99696 503 246 aa, chain - ## HITS:1 COG:no KEGG:Sez_1546 NR:ns ## KEGG: Sez_1546 # Name: comFC # Def: ComF operon protein C ComFC # Organism: S.equi # Pathway: not_defined # 55 213 27 181 193 73 29.0 7e-12 MHKKNKRYRALHTGITEDEQGGFKMKEEWCRLCMEEITNQQSLFEFLRQDSLLCGACRHE LAVLNKTVKLNGIKLHIAYVYNDFLENMIFQYKEGLDTALRDVFFHDIMKKINAKFRHYT IVLLPSSEEKTIERGFHPVKDMLHACRLKTIEPFYKTCNHKQSLQSFENRKNISQVIKMK PDIVLPKTRLLLVDDVVTSGNTLLCAYDLLQEHRYKIEVLALCANPRFVESCEKKDLKRK GMFSIL >gi|312953855|gb|AENW01000059.1| GENE 88 99621 - 100775 894 384 aa, chain - ## HITS:1 COG:L0318 KEGG:ns NR:ns ## COG: L0318 COG4098 # Protein_GI_number: 15673072 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) # Organism: Lactococcus lactis # 1 380 57 435 440 211 35.0 2e-54 MQCLRCGNTEKRYFYKDAKGWYCRKCIMFGRIGVGELPERKNVCRKPIHTAYQLKYPLTP AQKRCASEIVMYLNHHQDVLVYAACGAGKTELVMEAIKQSLAKGCRVGFAISRRQVVLEI RERMQDAFKNLNVIAVCEGYTEVTEGDLIICTMHQLYRYHAAFDLLIMDEVDAFPYRGNA VLKQIAIHACIGNRLYLTATPDEEMLSDVKQGKLQMVELFQRPHGYPLIVPDVKAALPSI QLYQLIRFLKRQKKEAAQTLVFVPTIALAEQMSRWLRIVFRCTSFTSKTKDKEKILKRFH EKRYECLIATTVLERGITIKGVHVVIYHADHPVFNEASLIQMIGRVGRNIEMPTGKGLFL CTRKTRDIERCIQALQRMNRGDSK >gi|312953855|gb|AENW01000059.1| GENE 89 100934 - 101944 963 336 aa, chain - ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 328 1 327 339 442 62.0 1e-124 MKILVTGGTGFIGSHTCVELIEAGNEVVIIDNLYNSQADVVDKIENITGKRVAFYEADCC DEATLEKIFSEHKIDAAIHFAGYKAVGESVQKPIMYYQNNLMSLLALCKVMGKHNCKRIV FSSSATVYGNPASVPIFEDFPLGPTTNPYGTTKLMIEQILKDLYISDNEWNIALLRYFNP IGAHKSGLLGESPNDIPNNLMPYIVKVANKELPYLHVYGNDYDTPDGTGVRDYIHVVDLA KGHVNAVNKVMEPIGVDAYNLGTGIGYSVLDVVNTFAKVNNIEVPYQIDPRRPGDIAQCY ASTEKALKELGWKAERGLEEMCADAWHFLQVEKEAN >gi|312953855|gb|AENW01000059.1| GENE 90 102202 - 103200 1138 332 aa, chain - ## HITS:1 COG:lin2106 KEGG:ns NR:ns ## COG: lin2106 COG2222 # Protein_GI_number: 16801172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Listeria innocua # 2 332 1 331 331 439 63.0 1e-123 MLLKFNEEWARSSVNGALAIRKDINRIVDEICAQGYRNICWLGIGGTWASGMQAAVHMKE QSEIETWAENASEYNTTGNKRVGEGTVVITSSVTGSTVEVVEAVKRMQAAGAKVIGFIDI DTTELAKLVDYEIVYPVNEQLKFFMVADRFMQNNGEFSDCDAMYAEFEAHLAQALIDVEK KADAFGQEFAKKHWNDPIHYFVGAGNQWGATYSYAMCYWEEQLWIKTKSITSGEFFHGMF EIITKETPVTVFIGEDAQRPLSERVAKFLPRICENYTIIDTKDYELMGISEGYRKHISHL VMHAVNNRIDAYMERETRHPMDIRRYYRRLDY >gi|312953855|gb|AENW01000059.1| GENE 91 103237 - 104067 1127 276 aa, chain - ## HITS:1 COG:FN0629 KEGG:ns NR:ns ## COG: FN0629 COG3716 # Protein_GI_number: 19703964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Fusobacterium nucleatum # 23 274 28 279 279 223 46.0 5e-58 MTSKSDKSIQKADITRMAFNQGSLGMEFSWNYERQMHIAFAMMMNKILKKVYAEDEEGYR DALTRHVEFFNITPQLAPFVGGIVASMEEMKSRGEVDGEAISSIKTALMGPLSGIGDSVF VGCLRVIAVGIGISLAQNGNMFGPIVYFLMYNIPAFIIRYFGAHFGYSIGFKYLQRMQAN GMMDKLLAAASILGVMVIGCMSKDMVWTTLNVELSKVGEEVTTLQSILDGIMPGLIGLGG TWMYFWLLKKKVNPIMLILGTMVLGIAGAYFGILAG >gi|312953855|gb|AENW01000059.1| GENE 92 104057 - 104827 1054 256 aa, chain - ## HITS:1 COG:STM0575 KEGG:ns NR:ns ## COG: STM0575 COG3715 # Protein_GI_number: 16763952 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 238 2 241 247 167 44.0 3e-41 MVQACLIGLIASLGVFGDQLGSLYINRPIILAPLVGLVLGNLHQGLIIGASLELFFMGAV SIGAYVPPDTIVGGVLATAFAISMGKGIETAVTLAMPIALVSQAIGNFCNVFNSVILRFT DRYAMEGKYGGVVATHWLIGMITIVRRFLLVFFAFYLGSEAVGSMINAIPAYVTDGMAAA AGLLPALGFAMLMRMTVNRQNVPYYFLGFALAAYMSVPVLGVAILGVILIVVKFDFMNLK GAAAGEAGVEVNDDDF >gi|312953855|gb|AENW01000059.1| GENE 93 104913 - 105389 560 158 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 145 1 145 153 159 56.0 3e-39 MIKLCRVDHRLLHGQVAFSWTNELSADCILIANDAVVHDEVFKTTMKLAKPSGVKLVIKN LEDSIKAINSGVTDKYRLLVVVKTIHDANVLSAGCPAVHSLNLGGTIRREGCRQISKAIF ISDRDEAELKELQQRGVSVFIQQLPAESPIALEHVLHQ >gi|312953855|gb|AENW01000059.1| GENE 94 105555 - 105974 469 139 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 139 1 140 140 123 39.0 1e-28 MERHYILASHGMFSQGIYDSIRIILGEKKHVHLITAYVKDGQDISDLIKETMKKIPTDAE IIACTDLFGGSVNNELMKYIGKKHFHLLTGMNLPMLMNLFLFSDEDADKLIRRLFTEAKT GIMYCNETVKGISSQEDEF >gi|312953855|gb|AENW01000059.1| GENE 95 105988 - 106809 903 273 aa, chain - ## HITS:1 COG:CAC3499 KEGG:ns NR:ns ## COG: CAC3499 COG1082 # Protein_GI_number: 15896736 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Clostridium acetobutylicum # 6 260 2 252 271 110 27.0 2e-24 MNFKDRLCAMNCHYRFYELEDFFQSVHKLGMHYVELWSGPMHYYVDARRHDSPEQLKKLC DRYQITIIGICPEQTNPKPNNIAVKQKHRQEEVLNYYRQMIDIACELECRQVLVTSGWCY YSEAVEEAWNRSVVMMKRITDYAKQRNVILALEALQPEESRLVNTIQDIRRYRNEVGSSC LKVCIDFGAMARMGHTPREYFEAFGSDIVHIHFVDGNPTGHLAWGDGSRDLKADLAVLEE YGYPGYLSLETATQRYYEKPWSAEMKTLKSFEE >gi|312953855|gb|AENW01000059.1| GENE 96 106799 - 109555 2608 918 aa, chain - ## HITS:1 COG:STM4534_2 KEGG:ns NR:ns ## COG: STM4534_2 COG3933 # Protein_GI_number: 16767778 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 464 908 13 458 461 198 28.0 4e-50 MNITTSKLQILEYLQKITRGLRMNELGGFTTISISSALNISRSLTSQYLNELVKDERIIK ISTRPVYYMDRSVLERKYQLELKSCEYLSLGELMKELHRNSPKLQDFQKAIGCDGSLQYP IAQLKTALSYPQGGLPVILHGEMGCGKSYLVRLTHEYCLNHMTSTRKEIPLLRKKAFRGE DKVRQMEELFGKGAVDGKAAERGLLEEADEGILCIEDASHLSEECQEKLADYLSRNKFTR MQDDQAQIESRVHLILSTSEDPHTAFCHSLLLSIPVICSIPSFQERNEEERLEFVIKFFQ EEQARLERTIYISKRLQHFLMSCHFESNIDELRRCIRTICANAFADCVSNQRMDICLYHL PVQLLDHLKVEKNSRDSDSLIRIDAVEKNAAGSKILIMWEQLLQAFEETCMDTHAFTSFL EQGQKALRYYYDILVFQETYYDGRLEAMEKIVIGVLNSVKLMKNINLPINCAYVLARMLV SAQKNTSSLHQWEQDHQKEIQRCLKKMAENMSNEYILTESIARQLHSNINMRLSEMNRIF LMLNINFYNRDIRSQDTVGIILSHGYSTASSIADAANSLLNSYTFEAIDMPLNTPVQEIS GKLNDFIEENPHLKNIILLVDMGSLEGIGEVIADSVNVGVINNISTSLALNIGMKIQQHY ELENLLETACAENQCNYKVLSEAKKEKAIVFTNDAGMVISEKLCRLFKNSLPRPIDLKMI SYEYDELMKNKAEDILFHRYDVVLMIKPYSLKLKKVNSVTLEDIMNFEHIEQLNQVFRPY LKEEEIEEFDRQLLKNFSMQSVMENITILNADKLLDYVSDSVSALQHTMGRKFQSKTIVG IYIHICFLVERLVTKTALEKYTDLSSFEKQHEDFIADVNRSFEVMLQHYHVRLPLSEIAY LFEYIENDVRKAGGEDEF >gi|312953855|gb|AENW01000059.1| GENE 97 110169 - 111152 627 327 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYIKDTILKSLAMANMDPVIIMDQAPLTHPSYATFSEAMVKEKKSTAEAEALWKLLIDGF RHQRELNKDAQKEAEAIKNTAQFNTLLIKYAIPEPLKSIYQDNFIYFSEKITNASTAKKQ EKAKENYMSFLRGVIRSTNPEFEQFAHKLRALLTISENRELALWSGGIDLSTFSYDKGRC PLEQTVLGNLLNNMPITTLWNLEAPLWNIISRTFVSQYTWLPVHVYFRVLDNASVLLRQE LPLMQKNNAALVIHWHPVFNYPKGMAEIGVHGEAITESGRGIDDMKAAAELLIAKLGAAS YKANKQAYERANSDYFDPTRPPFAVDE Prediction of potential genes in microbial genomes Time: Sat May 14 03:29:52 2011 Seq name: gi|312953836|gb|AENW01000060.1| Clostridium sp. HGF2 contig00005, whole genome shotgun sequence Length of sequence - 15727 bp Number of predicted genes - 17, with homology - 17 Number of transcription units - 8, operones - 4 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 181 - 240 3.3 1 1 Op 1 4/0.000 + CDS 334 - 1044 634 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 2 1 Op 2 25/0.000 + CDS 1056 - 1820 988 ## COG1475 Predicted transcriptional regulators 3 1 Op 3 25/0.000 + CDS 1836 - 2618 873 ## COG1192 ATPases involved in chromosome partitioning 4 1 Op 4 . + CDS 2631 - 3515 1185 ## COG1475 Predicted transcriptional regulators + Term 3633 - 3692 6.7 + Prom 3664 - 3723 11.0 5 2 Op 1 10/0.000 + CDS 3942 - 4847 832 ## COG0379 Quinolinate synthase 6 2 Op 2 13/0.000 + CDS 4869 - 6086 960 ## COG0029 Aspartate oxidase 7 2 Op 3 1/0.000 + CDS 6055 - 6912 506 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 8 2 Op 4 . + CDS 6925 - 7515 542 ## COG1827 Predicted small molecule binding protein (contains 3H domain) + Term 7517 - 7551 2.0 - Term 7499 - 7544 3.2 9 3 Tu 1 . - CDS 7575 - 8099 499 ## Cbei_2682 hypothetical protein - Prom 8308 - 8367 7.6 - Term 8464 - 8499 1.0 10 4 Tu 1 . - CDS 8542 - 8988 254 ## NT01CX_1193 spermine/spermidine acetyltransferase + Prom 9266 - 9325 11.3 11 5 Op 1 3/0.000 + CDS 9384 - 10100 717 ## COG2188 Transcriptional regulators 12 5 Op 2 . + CDS 10145 - 11596 1014 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 12090 - 12142 6.6 13 6 Tu 1 . - CDS 12180 - 12821 766 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Prom 12966 - 13025 7.1 14 7 Op 1 13/0.000 + CDS 13166 - 13648 600 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 15 7 Op 2 13/0.000 + CDS 13664 - 14410 901 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 16 7 Op 3 . + CDS 14407 - 15258 1178 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 15264 - 15307 7.9 17 8 Tu 1 . + CDS 15338 - 15725 575 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases Predicted protein(s) >gi|312953836|gb|AENW01000060.1| GENE 1 334 - 1044 634 236 aa, chain + ## HITS:1 COG:SA2499 KEGG:ns NR:ns ## COG: SA2499 COG0357 # Protein_GI_number: 15928295 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Staphylococcus aureus N315 # 8 236 4 236 239 225 50.0 7e-59 MSNIFHKEDFSKVLAKHGMILQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFL DSILPSFDMSIQGSFCDVGAGAGFPGIPLKIIYPELELTIVETLGKRITFLNALCDKLQL KGVTCVHERAEVYAKDHRESFDIVSARAVANLPLLSELCIPLVKKQGSFLALKGANGDEE YALAEKAIRLLGCEMKQRDVHTLSDGSQRINFVFVKTRPTPKKYPRPFAQMKKNPL >gi|312953836|gb|AENW01000060.1| GENE 2 1056 - 1820 988 254 aa, chain + ## HITS:1 COG:BH4059 KEGG:ns NR:ns ## COG: BH4059 COG1475 # Protein_GI_number: 15616621 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 9 254 32 281 283 205 51.0 7e-53 MKDTRIVDIDLVEPNPYQPRLEFDDEALMDLAQSIRENGLIQPITVREMDGRYQIIAGER RFRALKLNGAVDVPVLIMDANEVQMAEMALVENIQRENLSAIEEAKSYVEIMKYSGLNQS QLALRVGKSQSSIANKIRLLNLDEDVQEAVSTKKISERHARALIGLDEEKQHDALEKIVK KGMTVAQTEKMLKEQAQPKKEKKKVMLKGISKNIKIAINTIHQAVSMVNRAGTAAEINEE EHEDEVIITIRIPK >gi|312953836|gb|AENW01000060.1| GENE 3 1836 - 2618 873 260 aa, chain + ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 1 250 1 249 253 291 59.0 6e-79 MGKIIAVSNQKGGVGKTTTSINLAAGLGYLGNKVLLVDFDPQGNATQGVGAEVGEDKLSV YNLIMEDYKVEDIRKKLTSPPIDIVPASIALAGADLQMVKFEVGKEELLKNKLELIKDEY DFIIIDCPPSLGLLNTNALTAADSVIIPVQCEYYALEGVTQLLLTIRLVQQLFNRNLMIE GVVLTMYDARTKLSVEVQQEVRQHFKDRVYKNYIPRNVKLSEAPSRGMSIFEYDVRCEGA KAYAGLSNEVVKMNKKAKAR >gi|312953836|gb|AENW01000060.1| GENE 4 2631 - 3515 1185 294 aa, chain + ## HITS:1 COG:BH4057 KEGG:ns NR:ns ## COG: BH4057 COG1475 # Protein_GI_number: 15616619 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 10 288 5 279 288 220 49.0 3e-57 MPKKENSARLGKGLSAIFGEDVGNVLEDIQQGKTEVHEDSKFEVEVKDVKPNPYQPRKNF DDDKIQELADSIKLHGVFTPILVKKAVKGYELIAGERRLRASKVAGLKTIPAILMEFDDQ QMMEIALLENIQREDLNAIEEAQGYEKLIKKLGYTQEELAKRIGKSREHVANMLRLLKLP KSVQQYVIDKQLSMGHVRALLGLKDASQIEDVAKKAIQLHLSVRAVETLVKNMNEPKSAP EKKQRDINLDKVQDRLQSRFQTRVRIDEKQITIRYDGNEDLNRLLEMLGGIEEE >gi|312953836|gb|AENW01000060.1| GENE 5 3942 - 4847 832 301 aa, chain + ## HITS:1 COG:FN0008 KEGG:ns NR:ns ## COG: FN0008 COG0379 # Protein_GI_number: 19703360 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Fusobacterium nucleatum # 4 301 2 297 298 297 52.0 1e-80 MTKQEEIKQLKLEKDAVLLAHYYVPAEVQEIADYVGDSFYLSKVASKLTNKVLVFCGVSF MGESGKLLNPDKAVLMPDASADCPMAHMVTKAEIDDVRARYEDLAVVCYINSTAEIKSWS DVCVTSANAVQIVKKLPNQNILFIPDKNLGRYVAEQVPEKNVMLVKGYCPVHEEMKVKEI QELKQLHPLAEVLAHPECNASVLSIADYIGSTTGILKQAAASNAKEFIIATEIGVRYELE KQNPKKTFYFPKTEPVCMDMKKITLDGILHVLRTGENGAAVASNIAEPSKATLNRMLELA A >gi|312953836|gb|AENW01000060.1| GENE 6 4869 - 6086 960 405 aa, chain + ## HITS:1 COG:FN0009 KEGG:ns NR:ns ## COG: FN0009 COG0029 # Protein_GI_number: 19703361 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Fusobacterium nucleatum # 8 386 7 381 435 362 48.0 1e-100 MQSDMYYDAVIAGCGVAGLYTALNLPDTMRILMVCKGDMEECDSMLAQGGICVLPDEEDY TSYFEDTMRAGHYENNRESVDIMIRQSRPIIEELLRLGVRFEQNEDGSLRYAREGGHSRA RICFHKDITGKEITTALQKHVRSCSNITVMEHARMCDLLVEHGVCKGIALETKEQQVVHV HAEDTVLATGGIGGLYEHSTNYPSLTGDALRICKKHGIQLDHLDYVQIHPTSLYSRKKGR SFLISESARGDGAILLNKKGERFVNELLPRDVVSQAIFEEMKKDGTEHVWLSFQNVPKET IQSHFPNIQEACRKEGYDITKESIPVVPAQHYFMGGIHVGSHSETTMQHLYAVGETSCNG VHGKNRLASNSLLESLVFAKRAADNITVCRKGKKAYESNYDAACC >gi|312953836|gb|AENW01000060.1| GENE 7 6055 - 6912 506 285 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 17 278 18 283 286 199 42 1e-50 MNPITMQLVADKYIRLALEEDINGEDVTTCSVMPDYKEGEVQLICKEDGIIAGLQIFERV FTLLDPQTQVDFLVKDGDKVTNGQLMGKVHGDIRVLLSGERTALNYLQRMSGIATYTRNV ADMLEGSKTCLVDTRKTTPCMRVFEKYAVLVGGGKNHRYNLSDGVLLKDNHIDAAGGVKQ AIEAARRHAPFVRKIEVETENLDMVKEAVEAGADIIMLDNMTPAQMKEAVQLIDGRAETE CSGNITKENIELMKDLGVNYVSSGALTHSAPILDISLKHLSVLGE >gi|312953836|gb|AENW01000060.1| GENE 8 6925 - 7515 542 196 aa, chain + ## HITS:1 COG:FN0011 KEGG:ns NR:ns ## COG: FN0011 COG1827 # Protein_GI_number: 19703363 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Fusobacterium nucleatum # 18 181 6 168 169 121 43.0 7e-28 MDKKVADSPMATALTGSQRRKRILTMMRQSSRPLSGGALGRDTGVSRQVVVQDIALLRTE GYPIIATARGYILNETKKAVRLFKVCHTTEQISEELETIVDLGGSVEDVMVNHRAYGKMS APLRIRNRRDVAVLLENLKTGKSTPLMNVTAGYHFHHVTADSQEILDEIEEHLRQKHLLA EFLPYELEEESIPDIK >gi|312953836|gb|AENW01000060.1| GENE 9 7575 - 8099 499 174 aa, chain - ## HITS:1 COG:no KEGG:Cbei_2682 NR:ns ## KEGG: Cbei_2682 # Name: not_defined # Def: hypothetical protein # Organism: C.beijerinckii # Pathway: not_defined # 7 174 6 176 185 176 52.0 4e-43 MNKLWGHFKTITAHKLAVTKLCFRCGLYKQGLLHDLSKYTPVEFCAGVKYFQGNRSPIDY EKEVKGYSLGWLHHKGRNKHHWEYWLDNTVGGIRPVKMPLHYIVEMYCDRTAASRIYMKE NYHDGSAYEYFMNGYDNVIMHEETKAMLKMILEYQRDHGTDATVDFIRKEILKN >gi|312953836|gb|AENW01000060.1| GENE 10 8542 - 8988 254 148 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_1193 NR:ns ## KEGG: NT01CX_1193 # Name: not_defined # Def: spermine/spermidine acetyltransferase # Organism: C.novyi # Pathway: not_defined # 12 140 11 140 146 62 30.0 5e-09 MNIRYKRMESPHLDAVVKLYIDYYNTYEGGCWTYDKAYKRLHQLMTIEDALCFIQMADHA ISGFVMGYFKEFDDLTGYYLEEIVIARQFQGTHLGTHFLNEMEKTVKENGASFIELLSVN DEMHSYFYTKNGYRNAENMIFKCKHFTQ >gi|312953836|gb|AENW01000060.1| GENE 11 9384 - 10100 717 238 aa, chain + ## HITS:1 COG:lin0390 KEGG:ns NR:ns ## COG: lin0390 COG2188 # Protein_GI_number: 16799467 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 2 233 4 236 237 160 38.0 2e-39 MIPKYMQVYTEIKDAIQKGSYSANEMLPSGEEFAKQYACSVLTVKKALDRLVSEGVIVRK RGLGSFVKKCRTGPDRMQGVAVIGRDLIREEVTSVVEKFEVAACTTELADKMNIQAGEFV YEIERIRLYKQEPRVVEYTWMPLQIIPGLQRRDVETSIYAYIEKQLHKHIQGAHLSFQAV RPQALEKKYFHMNDNDFVCQVEELAYLDTSEIFEYSVARHLPQYFHFETNVIKELYDN >gi|312953836|gb|AENW01000060.1| GENE 12 10145 - 11596 1014 483 aa, chain + ## HITS:1 COG:lin0297 KEGG:ns NR:ns ## COG: lin0297 COG2723 # Protein_GI_number: 16799374 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 1 483 1 478 478 583 58.0 1e-166 MYFEKTAGFPDDFLWGSASAAYQIEGADREDGKGISNWDEFVKIPGKTFKGTTGAVAVDF YHHYKEDIARMAEMGLKTYRFSIAWTRIYPQGNGKVNEAGLAFYDNVINECLKYGIEPMV TIYHWDMPQALEEAYHGWENPQIIEDFVTYAVTLFERYGDRVKYWITMNEQNIFTSMGWM EGLHPPGKTDQLKLFYQVNHHANVAHARSVLELKKRFPHAMVGASFAFSPCYAIDCRPEN AMAKEDFDDLRNYWWLDIYGYGRYPKSAMKYLRSIDCAPDITEDEMRDIRQAASLIDFMG VNYYQTAVAEYNDIHGVGANHEVNTTGEKGTAKISGVPGLYKNPANPYLKTTDWDWTIDP MGIRMCCRTITSRYDLPIIISENGLGAFDKLEEDKTIHDPYRIEYLRAHIEELKKAVADG CEVLAYCTWSCTDLLSWLNGYQKRYGFIYVEREEDDASAALNRYPKDSFHWYAEVIKTNG QNL >gi|312953836|gb|AENW01000060.1| GENE 13 12180 - 12821 766 213 aa, chain - ## HITS:1 COG:CAC2973 KEGG:ns NR:ns ## COG: CAC2973 COG0800 # Protein_GI_number: 15896226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Clostridium acetobutylicum # 3 210 1 212 213 159 39.0 4e-39 MNMKKMNVTNRMYEAGALAIVRAETLDRACEIAEGCMKGGVPVMEMSYTLNNAGDIIQGL SEKYGDALCVGAGTVLDAETARHAILHGAAFIIAPNYNEEVAKMCNRYQIPYAPGCTTIT ECVDALSSGAAFVKAFPISDFYGPKLVKVFKTPIPDMPILASGGINLDNLTTWLENGVDV CGFGGLLTKGSSEDIAANAAKIHEIITSFRCSK >gi|312953836|gb|AENW01000060.1| GENE 14 13166 - 13648 600 160 aa, chain + ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 2 160 3 161 161 125 38.0 4e-29 MSIELTRVDFRLIHGQVITRWLTQCQINEIVTIDTALSKDAFMQEVFKMAAPKGVKITIV NVEDAVKRQQEGAFDKNRVMVLFKGVAELNAAVQAGLKLEKVQIGGLGGGPGRKAVNNAI TLDRADADTLLELEKMGIEIYFQTTPDYPSETLQKAVAKL >gi|312953836|gb|AENW01000060.1| GENE 15 13664 - 14410 901 248 aa, chain + ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 5 243 7 246 249 171 39.0 1e-42 MVIQAILVGILYWLSMGRASYFISFAFRKPVVLGVFIGLVYGDVQTGLLYGATIQLMYMG GIEAGGNIPSDQGLATCIAIPAAIANNLDPAAAVALAVPFGVLGVLINNVRRTINSFYNT KADKFVEDKQYDKLSIFSFVLPWLTNGVLYFTPVFIATLFGSSVVQAFINVIPEWAMNGL TNAGNMLPGLGFALTLVVMGKKKYLPFFVLGFFLYSVMGFSMLTGAVIALCLALIVSLFK QNDEEEVA >gi|312953836|gb|AENW01000060.1| GENE 16 14407 - 15258 1178 283 aa, chain + ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 17 283 21 286 286 196 38.0 3e-50 MSEAVNSVAAEEKKTIVTKKDLLKAWWKWTLAVEVPVSFDRMQALAFGYSMNKVLRKLYK DDPEELQAAMRRHTSMFNTNCDWGSIIHGITISLEEQRALGHDDISPEVIQSLKLGLMGP LAGIGDSVDQGIVATIPLAIFVPMALEGSVIAAFIPGLIYIAWSFGWSWFLFNKGYSLGK NSVLEILHSGAIKKVIDIASIVGLFMIGCLSASYIKVQTIVEFASDTSTVKLQEIIDGIL PNMLPFIVVMGMYLYITKRGPKYIRLMIYTMIIAIVLTFFHII >gi|312953836|gb|AENW01000060.1| GENE 17 15338 - 15725 575 129 aa, chain + ## HITS:1 COG:AGpA578 KEGG:ns NR:ns ## COG: AGpA578 COG0111 # Protein_GI_number: 16119626 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 115 5 117 317 85 38.0 2e-17 MKVLITPRGFANYGLDQVERMKSKGLDVHYNATGKAYTHEEFKALAKDADAIIVGVDKMD REMMEGCPNLKAVCKFGVGTDNIDLDYAKEHSIYVGRCVGSNSRSVAEHVLSMMFMEAKN LYTSVRDVK