Prediction of potential genes in microbial genomes Time: Sun Jul 3 03:53:18 2011 Seq name: gi|227860919|gb|ACLH01000001.1| Corynebacterium aurimucosum ATCC 700975 contig00001, whole genome shotgun sequence Length of sequence - 40534 bp Number of predicted genes - 40, with homology - 40 Number of transcription units - 15, operones - 6 average op.length - 5.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 123 - 869 534 ## cauri_1336 hypothetical protein + Prom 900 - 959 2.6 2 2 Op 1 . + CDS 1000 - 1950 706 ## cauri_1335 hypothetical protein 3 2 Op 2 . + CDS 1950 - 2933 534 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 4 2 Op 3 . + CDS 2924 - 3085 214 ## gi|262182351|ref|ZP_06041772.1| hypothetical protein CaurA7_00020 5 2 Op 4 5/0.000 + CDS 3126 - 3935 742 ## COG1189 Predicted rRNA methylase 6 2 Op 5 17/0.000 + CDS 3932 - 4843 489 ## COG0061 Predicted sugar kinase 7 2 Op 6 4/0.000 + CDS 4882 - 6558 1231 ## COG0497 ATPase involved in DNA repair 8 2 Op 7 . + CDS 6585 - 7769 1193 ## COG4825 Uncharacterized membrane-anchored protein conserved in bacteria 9 2 Op 8 . + CDS 7769 - 8728 837 ## cauri_1329 putative secreted protein 10 2 Op 9 3/0.000 + CDS 8729 - 9367 509 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 11 2 Op 10 . + CDS 9409 - 10287 659 ## COG4974 Site-specific recombinase XerD 12 2 Op 11 . + CDS 10371 - 11447 742 ## cauri_1326 hypothetical protein + Prom 11471 - 11530 2.8 13 3 Op 1 3/0.000 + CDS 11613 - 12491 801 ## COG1192 ATPases involved in chromosome partitioning 14 3 Op 2 21/0.000 + CDS 12501 - 13298 709 ## COG1354 Uncharacterized conserved protein 15 3 Op 3 12/0.000 + CDS 13315 - 13929 398 ## COG1386 Predicted transcriptional regulator containing the HTH domain 16 3 Op 4 7/0.000 + CDS 14017 - 14934 901 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 17 3 Op 5 7/0.000 + CDS 14946 - 15644 272 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 18 3 Op 6 . + CDS 15637 - 17250 1760 ## COG1160 Predicted GTPases + Prom 17322 - 17381 2.7 19 4 Tu 1 . + CDS 17463 - 18848 1188 ## COG2704 Anaerobic C4-dicarboxylate transporter 20 5 Op 1 19/0.000 - CDS 18856 - 19464 310 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 21 5 Op 2 . - CDS 19461 - 20636 716 ## COG4585 Signal transduction histidine kinase 22 5 Op 3 . - CDS 20573 - 21367 486 ## cauri_1316 putative ABC transport system, permease protein 23 5 Op 4 1/0.200 - CDS 21381 - 22238 465 ## COG1131 ABC-type multidrug transport system, ATPase component - Term 22350 - 22383 -0.6 24 6 Tu 1 . - CDS 22426 - 23268 322 ## COG0500 SAM-dependent methyltransferases 25 7 Tu 1 . + CDS 23544 - 24362 387 ## COG3509 Poly(3-hydroxybutyrate) depolymerase + Term 24487 - 24516 -0.4 26 8 Tu 1 . - CDS 24385 - 25467 356 ## COG2189 Adenine specific DNA methylase Mod + Prom 26017 - 26076 1.6 27 9 Tu 1 . + CDS 26164 - 26370 391 ## cauri_1311 hypothetical protein + Term 26431 - 26467 8.0 + Prom 26509 - 26568 2.2 28 10 Tu 1 . + CDS 26609 - 28018 1138 ## cauri_1310 hypothetical protein 29 11 Tu 1 . + CDS 28225 - 28767 397 ## COG2764 Uncharacterized protein conserved in bacteria - TRNA 28783 - 28856 73.9 # Pro GGG 0 0 - Term 28735 - 28773 9.3 30 12 Op 1 1/0.200 - CDS 28945 - 29343 183 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 31 12 Op 2 . - CDS 29351 - 30535 993 ## COG1073 Hydrolases of the alpha/beta superfamily 32 13 Op 1 1/0.200 + CDS 30599 - 32917 2186 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 33 13 Op 2 4/0.000 + CDS 33005 - 33436 475 ## COG1716 FOG: FHA domain 34 13 Op 3 4/0.000 + CDS 33553 - 34308 814 ## COG0789 Predicted transcriptional regulators 35 13 Op 4 4/0.000 + CDS 34434 - 35024 457 ## COG1259 Uncharacterized conserved protein + Term 35102 - 35134 6.1 + Prom 35148 - 35207 2.7 36 13 Op 5 . + CDS 35299 - 35895 719 ## COG0789 Predicted transcriptional regulators + Term 35953 - 35982 -0.8 37 14 Op 1 . - CDS 36049 - 36867 666 ## cauri_1301 hypothetical protein 38 14 Op 2 . - CDS 36925 - 37779 455 ## cauri_1300 hypothetical protein 39 14 Op 3 . - CDS 37776 - 39068 821 ## COG0513 Superfamily II DNA and RNA helicases 40 15 Tu 1 . + CDS 39178 - 39993 404 ## cauri_1298 hypothetical protein + Term 40136 - 40180 4.0 Predicted protein(s) >gi|227860919|gb|ACLH01000001.1| GENE 1 123 - 869 534 248 aa, chain + ## HITS:1 COG:no KEGG:cauri_1336 NR:ns ## KEGG: cauri_1336 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 248 1 248 248 479 100.0 1e-134 MRFPQSPNLFRHSYNSVFLSDLKAVPYSRKNDNPSPYNLCPVFESEDGVPQMRAIRDGLV FFGAMVVIAGFIFSFGLLLNSFQVPGLLALLLAGLLLYFFFLVARHILLAFRINKAWKNG WIDFYPVLFGSFFCDKQGRKTGKKGHFYVAKALVVALNGESRMLEVLVEGLSPDRMIKEG ATMARDRQGLRLDAIHNNGWTFWSVVRGKPLEHGSVEHGLSASQVAVGLDRVRHSWPLEE LQFFLDFS >gi|227860919|gb|ACLH01000001.1| GENE 2 1000 - 1950 706 316 aa, chain + ## HITS:1 COG:no KEGG:cauri_1335 NR:ns ## KEGG: cauri_1335 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 316 1 316 316 483 100.0 1e-135 MSESISRDHSRDREGSSEGNRGHNRSGGRKFEKRGGASGRRQERRGDRRDERRGGRDGAN PRRDNRRNDSKSHGCDKNKASHPQRSGYREERINRRMTDPDLPSDIDITDLDPSVLQDLS SLSKENSEAVAKHLIMAATWLDDDPQLSLRHARAAKDRAGRVSVAREMNGIAAYRAGEWK EALAELRAARRISGGPGLMAVMADCERGLGCPEKAVELWRSEDAKELAPEDIIELAIVAA GARLDMGQADSAVVTVQRAQPTKDAKGVSACRLAYAYANALLEAGRKDEAREWFQHAIEI DEGDWTDAAERLAECK >gi|227860919|gb|ACLH01000001.1| GENE 3 1950 - 2933 534 327 aa, chain + ## HITS:1 COG:Cgl1376 KEGG:ns NR:ns ## COG: Cgl1376 COG0647 # Protein_GI_number: 19552626 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 1 326 1 327 328 348 58.0 9e-96 MSILKTHDSLLLDLDGTVWEGGQALQCVVDVINSCGIPAVYVTNNASRSPQTVADMLGEI GLDADAHRVVTSAQAVIKIAREDLPAGAKVLVIGAESFRALARDAGFIVVDSADDRPAAV LQGMDKSVGWEQLSEGALAINQGAKYYASNLDTSLPTERGMAVGNGSLVAAIVSTTGVEP VSAGKPEPAMFTQAAKLVNSSKPLAVGDRLDTDIVGGNNAAMDTFHVLTGVSRELALIEA TPEERPNFIGAGFHELSLSEAQARPGAQGGFRARFDGYDIVLQGGNEKSTSVEALRTVLE VAWAGAEPPRYIQPRSEAAERVVSTWR >gi|227860919|gb|ACLH01000001.1| GENE 4 2924 - 3085 214 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262182351|ref|ZP_06041772.1| ## NR: gi|262182351|ref|ZP_06041772.1| hypothetical protein CaurA7_00020 [Corynebacterium aurimucosum ATCC 700975] # 1 53 1 53 53 72 100.0 1e-11 MAVKPHDPRAVLAPETLDASITEILTEPAETLEEELAQLDRAHTVLRDALQDN >gi|227860919|gb|ACLH01000001.1| GENE 5 3126 - 3935 742 269 aa, chain + ## HITS:1 COG:Cgl1378 KEGG:ns NR:ns ## COG: Cgl1378 COG1189 # Protein_GI_number: 19552628 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Corynebacterium glutamicum # 5 269 4 273 273 374 75.0 1e-103 MPPQRRRLDAELVRRKIARSREQAVEMIKAGRVTVGGFKATKPATVVEPEVSIKVEASEG DDWASRGAHKLLGALAAFDVDLKGKRVLDAGASTGGFTDVCLRRGAAEVLSVDVGYGQLL WRLQNNERVTVLDRTNIRNLTLEQTNGPCDAMVGDLSFISLKLVLPAIVECMADGAWLLP MVKPQFEVGKDRIGAGGVVRSPELRAEVTKDVAVFAQELGLSVKGVAASPLPGPSGNVEY FLWLVKDGLSTPEDKLDVLIDTAIKEGPQ >gi|227860919|gb|ACLH01000001.1| GENE 6 3932 - 4843 489 303 aa, chain + ## HITS:1 COG:Cgl1379 KEGG:ns NR:ns ## COG: Cgl1379 COG0061 # Protein_GI_number: 19552629 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 4 302 2 308 320 399 69.0 1e-111 MSRTSAAEGTTRREILLVPHASREDNLAATHRAAELLQEAGIKVRVCGADTVLPGLQHVR HTPAAAEGCELVLVLGGDGTFLRAADMARAVDVPVLGINLGHVGFLAEWEAESLDRALVR VIEQSYDVEDRLTIDVAVFDAEGKLRERSWALNEASIENLNRSGVLDAILEVDGRPVSAF GCDGVLISTPTGSTAYAFSAGGPVLWPSLDAILVVPNNAHALFTKPLVVSPDSQVAVESA SATTPAVVILDGFREISMPPGSRVEVVRGERPVRWVRLDQQPFTDRLVSKLRLPVEGWRG PRH >gi|227860919|gb|ACLH01000001.1| GENE 7 4882 - 6558 1231 558 aa, chain + ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 550 1 578 593 550 58.0 1e-156 MLVDISISDLGVIESSAAELSQGLTVLTGETGAGKTMVVTGLRLLAGCRADASRVRDGAS KAAVEGHFSSDSPAVAALVEDAGGEPDENGEYIASRTVSAAGRSRAYLGGRSVPAATLGE FASHLITVHGQNDQLRLLSADQQLAAIDRFEPSIEKSRSAYTEAFRQWRALAKDYQHRME SRREMAQEVDRLQFAIKEISDLEPEPGEDAELVALIKRLQDVDALREGAATALSALDGGE GFGDEDTAVNLVGAAESALTGASDAELTRLGERLSEVTTQLTDIAAELTTYLSDLPADPN LLEESLQRQQELKLLTRKYAADIDGVLAWRDAAEAKLATLDTSTEALEALKKEVMEAEKT MVAKAEALTAARTKAAKKLGAQVTEEIHGLAMPNSTLTAAVKKAKYSKTGADEVEFQLNG KPLASAASGGELSRVMLAMEVVLASGDGTTLVFDEVDAGVGGRAAVEIGRRLARLSTTNQ VICVTHLPQVAAYADSHLHVSKEKFTSGVADLTPEERVEELARMLAGLDDTETGRAHAQE LFDRAQAEVETFRAPSTH >gi|227860919|gb|ACLH01000001.1| GENE 8 6585 - 7769 1193 394 aa, chain + ## HITS:1 COG:Cgl1381 KEGG:ns NR:ns ## COG: Cgl1381 COG4825 # Protein_GI_number: 19552631 # Func_class: S Function unknown # Function: Uncharacterized membrane-anchored protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 394 4 397 397 470 61.0 1e-132 MSLFSRNTDLPGEHGALRDCTPGGKGMKKFSAGDFAVINAANISRQEAQTLVDMKPAAVI NVAEFSTGSIPNYGPHMLLDADVTLVEGVGQDFVSNFKDGKKARLTEDGAIYSGDTQLSS GTVVTRDRAEKNFASAQQELIDHMEAYFGNSIEFIHSEGPLLIDGLGVPDAGSDMAGRKV LVVSPSEEHRKKLTLLRNFIREYEPIIIGVDSAADTLVELGYQPHFIVGNPSEVSSETLR SGAQVILPAEPDGTAEGLERIQDLGIGAMTFPAATDSATDLALLLADYHEAQMIVQVGGA LDLDDIFANESNATPAALLCHMKAGTRLVDADAVIDLYTAPNSGAMGWLWALLGILVALA AVILIVGLGGDESFLQNLIDTWNNFALSVQGWFK >gi|227860919|gb|ACLH01000001.1| GENE 9 7769 - 8728 837 319 aa, chain + ## HITS:1 COG:no KEGG:cauri_1329 NR:ns ## KEGG: cauri_1329 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 319 1 319 319 486 100.0 1e-136 MVSPKSFVVAGLGFGAALGIALGTLVIAPNMDSAPGPGGESTDEVREKYSELVLDHNIAE AQLDSADSVMGELGRFVVDGSLFQRPVMVLSMPDADDADVKAVKDLLGSADSTDAGSIKL TDKFLAQDSADKLLSLVTSTLPAGAKLDKKKVDAGTHSGQALAAGLLMDAKTTEPLASVE DRATLLRALRDAGYIDYKDGTILPAQAVVVVGGGLVPGDDENSAAKKYAIDNTVKFLEGF DSVDTAMVYAGRVQSAGDDGVLDKLRAAKTEISTVDSIDHPVSQMATVLAVKEQLDGGKG VYGSAANAEGAAPALPKDL >gi|227860919|gb|ACLH01000001.1| GENE 10 8729 - 9367 509 212 aa, chain + ## HITS:1 COG:Cgl1384 KEGG:ns NR:ns ## COG: Cgl1384 COG0494 # Protein_GI_number: 19552634 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 2 212 10 223 223 246 61.0 3e-65 MSHEFRTVGSELLVDAPIIAVRRDDVVMPGEVVAQREIVEHLGAVAVVALDESNRVAMVE QYRHSVAKRLWELPAGLLDVKGEDELSGAQRELQEEAGLAAEEWAVLTDLVTSPGFCEEA VRVFLARGLSSVEKLAAEGDEEADMSFAWVPLEEAVERILAGEIVNSIAVAGLLAAYACV QEGRAARSVDAPFELRPQSLAQRRPGPDLKKL >gi|227860919|gb|ACLH01000001.1| GENE 11 9409 - 10287 659 292 aa, chain + ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 2 292 13 304 304 354 64.0 1e-97 MHLMVEKGASKNTVSNYRRDINRYVDWLAESGITDLRRVTRAHVENYLVFLRESLAQSSA SRALIVARGLHKFALAEGMIEEDVAAEVSPPKRAQALPETLSVQDVEALLNAIPTDESAT PIDIRDRALLEMLYGTGARISEVISLSVDDVTGEGPASVRDILVLSGKGDKQRLVPLGSH AVTAVENYLVRARPVLATGASHSLFLNTRGKALSRQSAWAAIKTAAQRAHLSTKISPHTL RHSFATHLLEGGADVRTVQELLGHSSVTTTQIYTHVTADSLREVWRTAHPRA >gi|227860919|gb|ACLH01000001.1| GENE 12 10371 - 11447 742 358 aa, chain + ## HITS:1 COG:no KEGG:cauri_1326 NR:ns ## KEGG: cauri_1326 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 358 14 371 371 583 100.0 1e-165 MALAFALTVAPLSGILAGPVSGKGEIAGFGAAVAHAQDATIPVPAGQTTTVSLPVPVDVN VASDGWNVNASGGTATVTAPAAGGQISVPVTYQGVTMTIVLVADAEVTAEDLNDAAESGD PESLGGGQQNPGGVDSPEDGGDPQGGTGGDEKEGGNDPATGGSAPATDGGGQGQERPPRT GRGWEGVDDSHTAYVNLESTIDGQTITAKLGFKQALDLYNRFKHLEDDGVTLRYLNAEGE FVEGVKREIDKGSRTMTLTYPEGTEPDNPFIMQFFNKDNQSAELVVTLTDPTRENASEVP PEQQLDSDGANGSDSEEQDSSGMGAGLLAAGIVGIGIIALIVGFVVKRRRSTSQEELS >gi|227860919|gb|ACLH01000001.1| GENE 13 11613 - 12491 801 292 aa, chain + ## HITS:1 COG:Cgl1387 KEGG:ns NR:ns ## COG: Cgl1387 COG1192 # Protein_GI_number: 19552637 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 3 291 1 289 290 464 79.0 1e-131 MTVSDEGLFEASEAQVGLTGRPLRELPEPEPLEKHGPATIISMCNQKGGVGKTTSTINMG ACLAELGRKVLLVDLDPQGALSAGLGLTHDQIQDTIYDVMLDSEVSVHSAIVHTGVAGLD LVPANIDLSAAEIQMVNEVGREHTLARALRPVRKDYDFIIIDCQPSLGLLTVNALACSQG VIIPMECEFFSLRGLALLTDTVEKVADRINFDLEIMGILVTMFDRRTRHAREVMDRVVEY FGDKVFDTVITRTVRFPETSVAGEPITTWAPSSQAAKQYRDLAKEVIERANS >gi|227860919|gb|ACLH01000001.1| GENE 14 12501 - 13298 709 265 aa, chain + ## HITS:1 COG:Cgl1388 KEGG:ns NR:ns ## COG: Cgl1388 COG1354 # Protein_GI_number: 19552638 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 7 265 63 321 321 357 74.0 1e-98 MTQPEITGFRIALGNFEGPFDLLLQLIQAKKLDVTEVALSEVTDEFVAYTRALGETADLD ETTEFLLIAATLLDLKAARLLPRGEVDDLEDLELLETRDLLFARLLQYKAYKQVADQFAQ WQRAAQRRYPRAVAMEERFSDLLPPVKLGHTPASFAELAAGVFRPKPPEEVATGHIHQVA VSVPEQAGKILTTLKLLGTGQWMSFDALTRDCTVSMEVVGRFLALLELYKAKAVDASQPE SLGPLELSWTGLDVDPAVVAAANWD >gi|227860919|gb|ACLH01000001.1| GENE 15 13315 - 13929 398 204 aa, chain + ## HITS:1 COG:Cgl1391 KEGG:ns NR:ns ## COG: Cgl1391 COG1386 # Protein_GI_number: 19552641 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Corynebacterium glutamicum # 20 203 11 192 192 206 67.0 2e-53 MDDTSSPAPSEAAPSNGQRALPLIPQLRSRLESILLVVDSPASVEELARVLDAEPTVVSD TLRAVERELTERGSGIDLRETPEGWRFYTRKENADAVEQFVLDGTQTKLSRAALETLAVI AYRQPVTRAQVAGVRGVNVDGVVRTLLLRGLIREIESPEPSVGHAHQYETTELFLELLGI DSLERLPDLAPLLPDIEQIDEDYS >gi|227860919|gb|ACLH01000001.1| GENE 16 14017 - 14934 901 305 aa, chain + ## HITS:1 COG:Cgl1392 KEGG:ns NR:ns ## COG: Cgl1392 COG1187 # Protein_GI_number: 19552642 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Corynebacterium glutamicum # 1 305 1 320 320 385 63.0 1e-107 MTPPARRDGTPEKKKRDSDMIVSNAKPARHQHVKKKATADSVARDLGADWLVEGKNKKNS QNQGERLQKVLAKAGVASRRHAEILIDEGRVEVNGQVIIKQGTRVDPNKDVIRVDGTRIN VNEETQYFVLNKPRGMQSTMSDDMGRPCVGDVVADRVVAGQRLFHVGRLDADTEGLLLLT NDGELANRLMHPKYEVTKTYLATVLGEADKKLIRQLREGIELEDGLAQADYVQIVDKNQG YSLVRVELHEGRKHIVRRMLKEAGYPVQRLVRTKLHTVQLGDMKPGSLRALNSNELTSLY KAVGM >gi|227860919|gb|ACLH01000001.1| GENE 17 14946 - 15644 272 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 6 217 35 279 863 109 34 3e-23 MPDQGLILAVDGPSGTGKSTTCRALAKQLEAKYVDTGAMYRVATLAVLRAGVDPADTDAV IAATADLPLEVSDDPDSTQVIFDGEDVSRVIREDEVTRNVSAVSAIPEVRQNLVELQRKL AAQAHRAIVEGRDIGTVVLADAPAKAYMTASAEVRAQRRHDQNLAAGIESDFDTVLADVE RRDAADSSRATSPLRPAEDAVLVDTSEMTREEVLDALIAVVKESAAKEASND >gi|227860919|gb|ACLH01000001.1| GENE 18 15637 - 17250 1760 537 aa, chain + ## HITS:1 COG:Cgl1394 KEGG:ns NR:ns ## COG: Cgl1394 COG1160 # Protein_GI_number: 19552644 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Corynebacterium glutamicum # 31 536 34 538 543 765 73.0 0 MTNEPQNPDLNPEQQPEDFETEFHYPVGKLEEEVVRDPHGGWAQKDFDSEDFDYEFDESE FGEADFGDEEEPAEGDAPLSEEEWEALSHAFGVGEEHTEENLCTVAVVGRPNVGKSSLVN RFLGRREAVVEDHPGVTRDRVSYVADWNGQRFFVQDTGGWDPNVKGIHAAIARQAEQAMD TADVIVFVVDTKVGITETDAVMARKLQRSEVPVILVSNKFDSETMYADMAEFYALGLGDP WPVSAQHGRGGADVLDEILRLFPEEPRHSSITSGPRRVALVGKPNVGKSSLLNKLTAEER SVVDNAAGTTVDPVDSLVQLDQRLWKFIDTAGLRKKVKNAQGHEYYASLRTRGVIDAAEV CIMLIDASQEVSEQDQRVLNMILEAGKALVIAFNKWDLVDEDRRYYLEREIDENLRHLPW VTRVNISAETGRALQKLEPAMIEALESWDQRVSTGQLNNWMREAIAANPPPMNNNRLPRV LFATQASTQPPTIVLFTTGFLDAGYRRYLERKFRERFGFHGSPVRIAVRVRERRQRR >gi|227860919|gb|ACLH01000001.1| GENE 19 17463 - 18848 1188 461 aa, chain + ## HITS:1 COG:Cj0671 KEGG:ns NR:ns ## COG: Cj0671 COG2704 # Protein_GI_number: 15792025 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 16 457 15 468 474 402 52.0 1e-112 MLASVIAPDSVLAIILQIIIILGALLLGTRYGGIGLGLISGIGLLLMVFVFGLAPGEPPV SVMLTIIAVIGCAATLQQAKGLEVMMQFAEKILRAHPERITILAPLTTWFLTVLCGTGHV VYTMFPIIEDIALKKGIRPERPMAVASTSAQMGITASPVSVATVSLASIIAENAGVIDKA YSIPQILMVAIPASLSGVILAALWSLRRGKDLDKDPVFQEKMKDPEFAARINESTGSLMN EVFSKEARRSVVVFLVAIACVVVLGAFEFLRPVFPGKDGELSPLSMNLVIQMIMLVAGAI ILLSCKVEPAKIASTPVFKAGMTAVFSVFGVAWMADTFFQAHIDALESNLGSVVEAAPWA YAVVLVIVSKLVNSQAAALVAIAPIGLQLGIDPAVIVGFYGAAYGYFILPTYPSDLACIG FDRTGTTHIGKFVINHSFIIPGAISVVTSCVVGSVLAQILL >gi|227860919|gb|ACLH01000001.1| GENE 20 18856 - 19464 310 202 aa, chain - ## HITS:1 COG:BS_yocG KEGG:ns NR:ns ## COG: BS_yocG COG2197 # Protein_GI_number: 16078980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 5 201 2 197 199 189 46.0 2e-48 MTVSIRVLIAEDQSLVRGALTALLNTEPDIEVVADCASGTEVAALVAKHSVDVALLDIEM PGMNGIDAAQTIAETGCRSLIVTTFGRSGYVKRALQAGVDGFLVKDTPPDELADAIRRVH SGLRVIDPQLAQDILFTPDNPLSDREAEVCRLLLRGLGSADIASQLHLSGGTVRNHVSAI MAKTRAGNRFEAARRAEANGWI >gi|227860919|gb|ACLH01000001.1| GENE 21 19461 - 20636 716 391 aa, chain - ## HITS:1 COG:DRA0009 KEGG:ns NR:ns ## COG: DRA0009 COG4585 # Protein_GI_number: 15807681 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 59 362 3 301 336 108 32.0 2e-23 MDSGIRRDVLASSQPRQEPSMMNSFKAHDAAFAAVWLIFLLPVLLQILFRPTTSAAQRFW AVAITVVFCMAYSLAFGTLHSYPHRWSYRRRVAAWWIILALLALAAIPSHGVWVVVFVPY LGALVSFTQPLRTASIIIALTGAVVGIPLWFYAEQRFIDFALILFGWPLLILTLGTLSQR EDTETALRHDLDLAQQREDIAADIHDLLGHTLTVINLKSEVARRLIDRDPSTAATELAEI GVLSRMSLAEVRSTVTRMKNPTFAGEIQAAHRILETAGITTHLPDTFTRPQSHEALFSWA LRELTTNVVRHSGATECWVTLGENSLQVTDNGGGFTEDAEQALTAGLTGLAGLRRRADDA GGDLIIRRSDGLTSVLLTLENTPEAKEFQQQ >gi|227860919|gb|ACLH01000001.1| GENE 22 20573 - 21367 486 264 aa, chain - ## HITS:1 COG:no KEGG:cauri_1316 NR:ns ## KEGG: cauri_1316 # Name: not_defined # Def: putative ABC transport system, permease protein # Organism: C.aurimucosum # Pathway: ABC transporters [PATH:car02010] # 1 264 1 264 264 482 100.0 1e-135 MNTRMASPNLAATLRYAGHDLKRLRRDLPTLFFSIGLPIIFYILFGAMQEYGDIEFNGGN VAALVMIGMALYAGATGAVGAAGSMIAENRAGWGRQLALTPLRPVQLGIAHFLNISVRAI LPIAAVFITGALTKANLQPDQWALSFLVTVACAIPFGFYGMACAMLIPSENTVSIASSSI VILAFAGNVFMPLKENLLDVGRFSPMYGAQALARWPLSEGAQMINGQQLFIEDPLWYAWV SIAVWTVVFVGMCLLLRNRDKNRA >gi|227860919|gb|ACLH01000001.1| GENE 23 21381 - 22238 465 285 aa, chain - ## HITS:1 COG:BS_yvfR KEGG:ns NR:ns ## COG: BS_yvfR COG1131 # Protein_GI_number: 16080462 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus subtilis # 3 276 20 294 301 183 37.0 3e-46 MPALHDVSLTIQRGEIVGLLGTNGAGKTTLIDLILGLTSPTSGTINVLGTSPKEAAKTGR IGAVMQSGGLLPDITVKETLELLGAAFPSHRPLKEIIERANLGDILSRRVRKCSGGEQQR VRFGLALLGDPELLLLDEPTAGMDAAARRHFWEAMHHEAESGRTIVLTTHYLEEADAFAE RIVMLNKGEIQADGSTEEIRRTNSTRIVRATFPDGLPDSLLSADLPGVVHLERTETGLTI TTRDSDAVARFLLTETAARDITIADRSLEDSFLELSHTSPASADL >gi|227860919|gb|ACLH01000001.1| GENE 24 22426 - 23268 322 280 aa, chain - ## HITS:1 COG:Cgl1397 KEGG:ns NR:ns ## COG: Cgl1397 COG0500 # Protein_GI_number: 19552647 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 21 279 4 262 271 275 55.0 7e-74 MSSLPSDPSDSLGTPSPHPLPEHYPSYRRASGKESPNFGTAQQRVHSAQAFQQGADAYHD ARPGYPPEVSQLISSAHTVLDVGAGTGKLTESLNNPVVYASDPSPDMTRVLARLGIPCWR ATAENTAAETASLDAITCAQTWHWVDVERACAEFDRVLRPGGKVLLVWNTLDVNADPWIL RLSRIMHSGDVHRPGFYPALSNPWTLRDELRLTWEHELSPEDLHSLMHTRSYWLRNGEKI HERMTHNLNWYLYEHMGFSPEQALSIPYRTDAFLLARHGE >gi|227860919|gb|ACLH01000001.1| GENE 25 23544 - 24362 387 272 aa, chain + ## HITS:1 COG:ML0715 KEGG:ns NR:ns ## COG: ML0715 COG3509 # Protein_GI_number: 15827302 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Poly(3-hydroxybutyrate) depolymerase # Organism: Mycobacterium leprae # 19 236 42 272 304 82 28.0 8e-16 MLVGPEPGHTKKVRLASGRSFLLHVPENYTPERSWPVLLSFHGYTDSPENMEQYTQFNAA HAIVAYPAGEKAAWAPAPYAATSAEEDLEFVRTLVDSLRSTYEVDDNAIYAAGLSNGGGF AAFLACRMPGTFRSVATVSAAYYEGIHTDCSDRPVGRLDIHGTKDPVVNYEGGVRHDTAY SSVAEVLGQDQRRNKCRGDVDSVRLTNGATRETWTACEAPLQHIRIEGGSHVWPGGNNDT KIEVGQGFATDAVLDFFGIPGRPEGTEEHGVA >gi|227860919|gb|ACLH01000001.1| GENE 26 24385 - 25467 356 360 aa, chain - ## HITS:1 COG:FN0416 KEGG:ns NR:ns ## COG: FN0416 COG2189 # Protein_GI_number: 19703758 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Fusobacterium nucleatum # 20 348 1 366 525 218 34.0 2e-56 MADNLAALNDFIARGLRADVIYIDPPYNTGKDFVYRDNFRQRRDMRSEHFGQWHAEWLSM MLPRLILAREVLADTGFILVSIGESECAHLRLILNEVFGEDCFAGQLIWKKGGTGKNDSK YAVLEHEYVLCYAKSSANNGFNVDMEAQTSTRYNHSDEKGNYSLVRLDSKTLGYLPSLDF PIVAPDGREYWPHQPEGKTKVARWRWGKDKVTEHYDELVFRRGFVYTKNYEKKGARPRSI LDGERFGVTRTGRRDAEEALGTTGVFDFPKPVRLIKHLISIAGGPDAVVVDFFAGSGTTA QAVVELNREDGGQRSFHLVQIPAPTEASSAARQTGFETVADICLARVRSLNVPFDHFTLT >gi|227860919|gb|ACLH01000001.1| GENE 27 26164 - 26370 391 68 aa, chain + ## HITS:1 COG:no KEGG:cauri_1311 NR:ns ## KEGG: cauri_1311 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 68 1 68 68 74 100.0 1e-12 MGIFDKAKDALNTDKGEQISDSALDKGADLAKRKLGEDKADKIDSARDQLDERIGNQGAE APKGDEQE >gi|227860919|gb|ACLH01000001.1| GENE 28 26609 - 28018 1138 469 aa, chain + ## HITS:1 COG:no KEGG:cauri_1310 NR:ns ## KEGG: cauri_1310 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 469 1 469 469 902 100.0 0 MITSVGVERGNRPSRQLLIEQAGRVIAKAGIDEVRLREVADQVDVPFAEAQALFASEAEL VDATKHSLNDALTSVVDLHLERLPENATAVDKLRATGLSYFSFAVEDPSAFAAFTAVHAT PRLGLTAEEFADPDGRAEKCPIMRILFELTEEAIKESGAPELDAKGTLLSALSIFSHLHG VTQLAAEGILRYLSPAAKKQTFSAVMDTLSVGLYPFFRGERIERTIPDGLVGEQPEALLT KAKDLPRATEEEQRSALLRGAVEEVLDRGVTGLHIGGAANRAGLRVQEAEHLIESDQELA SYLERFLDKINYEFIYRQVAALPEGSSAISKIKATGYGYVSHALYDPQGFDALIKIASGP IVPMSFEDDFLPNANKAVELKRDFSEFGQAFGFIMSLVREVIDEVDGPRTPWVLFTLVIS VWAGAHGLSMLSTKGPLRGYDPDFIFEVLTQYMDIEFGGIMRSLSGMDN >gi|227860919|gb|ACLH01000001.1| GENE 29 28225 - 28767 397 180 aa, chain + ## HITS:1 COG:Cgl1051 KEGG:ns NR:ns ## COG: Cgl1051 COG2764 # Protein_GI_number: 19552301 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 25 159 1 135 137 84 39.0 8e-17 MLGARGAGKHSARTVSLAEGYDRYMALNTTAYFSFPGNAREMLEFYHSVFGGELEILTYG EQLDNGVQFPFDPPRKAVAHATLQGPFTLGGGDDLQNSRDRVNPGDIGFTVESDSVEEAE KIYAALAAEGKPSMPFAQAPWGDYFGMVVDRFGVGFNITVPASAVNDNGLGNTKGWSEKL >gi|227860919|gb|ACLH01000001.1| GENE 30 28945 - 29343 183 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 13 132 4 133 134 75 35 6e-13 MIVLNPLDPAARCPCGTGLTFGECCSRYHAGTPAPSAEALMRSRFSAFVTGDEDYLLRTW DPETRPERLDLAETGIRFYRLDIIDTVAGGPLDQTGIVEFEAFYKGAAKGSQRERSSFRR QDGQWVYSSGEL >gi|227860919|gb|ACLH01000001.1| GENE 31 29351 - 30535 993 394 aa, chain - ## HITS:1 COG:Cgl1404_1 KEGG:ns NR:ns ## COG: Cgl1404_1 COG1073 # Protein_GI_number: 19552654 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Corynebacterium glutamicum # 18 264 1 251 252 302 66.0 9e-82 MVMQSVNVSLPSSTGTTMAGTIDFPDSPPQAFAIFAHCFAGSRHTPGAARVSKQLTNFGI ATLRFDFPGLGQSEGNFADTCFSQNVADIQAAADWLAKNYSAPQLLMGHSLGGAAALAAA NDIRSLKAVATIGAPFDPAHSVLHYADKIGQVDANGEVEVTLGGRALTISRLFLEDLADT NPEAYLPRLRKPLMVLHSPIDQTVGIDNAQNIFRTTRYPKSLVALDKADHLLTKQGAAAR AADLIGAWAEQFVVPENLPAAVADDSALAIPAVGTRMGVVVRHNNRSVSADRTKKNGGKG QGFTAEGLLMSAVAAASTQAIMAAGKAHKIDAKALESVSVTVTQESETRFARTVTLPASL TADQQRALGDAAAASTIDPLLTVDVTTTVRTTAG >gi|227860919|gb|ACLH01000001.1| GENE 32 30599 - 32917 2186 772 aa, chain + ## HITS:1 COG:Cgl1405 KEGG:ns NR:ns ## COG: Cgl1405 COG0653 # Protein_GI_number: 19552655 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Corynebacterium glutamicum # 10 772 1 763 763 1046 71.0 0 MTHKDGGVLMGAFDWFWKAMGAQSERNNKKSKAVVTAADSAVEDIANLSDTEVAATAREC VKDGKIADKSRFLAALAVASERKLGMRPFTVQSQAVLRLLEGDVIQMATGEGKTLVGAMA ATGFALTGKRVHLVTVNNYLAARDAEWMRPLVEFFGLTVASVTEKLGPEERRAAYLSDII YAPVNELGFDVLRDNQITSREQTVQARADVALVDEADSVLVDEALVPLVLAGNRPGEEST GHITNVVSRLREEQDYVIAEDGRTVALTDEGAARVERELGLDSLYSEENIGSVLVKVNLA LHAKALLIRDIHYIITEGKLQLIDASRGRVAELQRWPDGLQAAVEAKEGLEVSEGGRILD TITLQELMRRYPLVCGMTGTAVEATDQLRQFYDLHVSVIDRNKELQRFDEDDRIYASVDE KSRAIVNEIVAINSTGQPVLVGTHDVAESEDLAEALRERGITVNVLNAKNDEDEARIVAE AGDVGRVTVSTQMAGRGTDIKLGGADESDREAVVEKGGLAVLGTSRHRSSRLDNQLRGRA GRQGDPGKSLFFVSLEDDVVKQGGEDESLSARPDANGLIDSKRVRDFIAHCQRVTEGQLL EIHAQTWKYNQLLADQRIIIDERRAKLLDTDQAWRELAERAPERAVELGEVPAEARERAA REIMLYHLDLAWADHLELMDDVRESIHLRAIARETPIDEYHRIAVREFKDLAQRAVDDAL DTFKTVLIDSEGAHLEDHGLSRPSATWTYMVSDNPLSGGGNSVLKGIGNIFR >gi|227860919|gb|ACLH01000001.1| GENE 33 33005 - 33436 475 143 aa, chain + ## HITS:1 COG:Cgl1406 KEGG:ns NR:ns ## COG: Cgl1406 COG1716 # Protein_GI_number: 19552656 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 1 141 1 139 143 216 82.0 1e-56 MSENTGTPEPQAETTSVFRADLLKEMENGTAAGSDASVAGAENLAEGQALLVVKRGPNAG ARFLLDQPTTTAGRHPEADIFLDDVTVSRRHAEFRAKDGQFEVVDVGSLNGTYVNREPRN AQVLEVGDEIQIGKFRLVFIAPK >gi|227860919|gb|ACLH01000001.1| GENE 34 33553 - 34308 814 251 aa, chain + ## HITS:1 COG:Cgl1407 KEGG:ns NR:ns ## COG: Cgl1407 COG0789 # Protein_GI_number: 19552657 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 249 1 250 252 260 58.0 2e-69 MSAQKSTAAAAAASSVAKKTKPAKQKPMSIGVTLKHVQKQFPDVTVSKIRFLESEGLITP ERTAKGYRRYYQKDLDRLRYILTAQRDHYTPLKVIREQLDAMDSGQVTAIVSSQAEALIS AEQLRAPVVTRLTDADVADQAGTTQENIAKLVSVGLIKPDPAGFFDTDDVSIVSAAVALE SFGLEARQLKSLRNAARRQADMISQVATPVAHSKSDTAPQQAEELSQQMAALVLSLHGTL VKTELRDEFRP >gi|227860919|gb|ACLH01000001.1| GENE 35 34434 - 35024 457 196 aa, chain + ## HITS:1 COG:Cgl1408 KEGG:ns NR:ns ## COG: Cgl1408 COG1259 # Protein_GI_number: 19552658 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 193 6 187 211 92 28.0 5e-19 MTTEVLKFLGIHPVGPEGNLCALFYWEEADRHVPVWVSPIDGARVLQVLERHFNARPSTY ELLIAFAEQLDGIEHICVSEYRKGVFMVDLVDGTGEEHDARLSDALVLADHYGLPIHFEK DVLDEVAIYISDDDLKEYYGLEREAESPETFPEKRIRDFQERAAQQNTQEDDGFEQMMRD SGISEEDLLGGEEEED >gi|227860919|gb|ACLH01000001.1| GENE 36 35299 - 35895 719 198 aa, chain + ## HITS:1 COG:Cgl1409 KEGG:ns NR:ns ## COG: Cgl1409 COG0789 # Protein_GI_number: 19552659 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 24 198 17 191 191 277 80.0 8e-75 MSSKNNRSESSALPLDDSAANTYVQESLFDVGPDEELGYRVPIACQVAGITYRQLDYWAR TDLVKPSIRTARGSGSQRLYSFKDVLVLKIVKRLLDTGISLQNIRLAVESLRDRGVNDLA ELTLVSDGTTVYECRSNDEVIDLLAGGQGVFGIAVPGILKELSGTITSFPAERVVEEEDI DVVIGLDELAARRKRKTS >gi|227860919|gb|ACLH01000001.1| GENE 37 36049 - 36867 666 272 aa, chain - ## HITS:1 COG:no KEGG:cauri_1301 NR:ns ## KEGG: cauri_1301 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 272 1 272 272 399 100.0 1e-110 MARHSDGKNNYAFAPWVIIVAILAVLALAIGGFFLFREGDSSNSETVAADTTAEASPEET PTSTAAKTPESATSSESEHPSSAAPTTENKAPEDVAPNTLFLLDTSENLAPYFDAVSQGV AEAASAVGAKGSQVALWNYSSPISATATVGFRQNVAYGDAENVAFAVGQFGTGGVPQTRS AVVAALDNATDQTAGSGDNTRVVLITTGTQQDMGDASFAEAAKNARGEGVSLSVVHIGDA EKDAELEKLADVYSTISNPSDAQEVITSAAGA >gi|227860919|gb|ACLH01000001.1| GENE 38 36925 - 37779 455 284 aa, chain - ## HITS:1 COG:no KEGG:cauri_1300 NR:ns ## KEGG: cauri_1300 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 284 1 284 284 577 100.0 1e-163 MILQTTDWRAQMRKHEESADEFLRRYRHPGSYHPVYDFLFEYYPVRPSHLRRWHPGVGIT LAGDAPHSDWRYYRRTAEGVTLDTEAFFERRGGTVRYILDLLEKTTRNPTQFDCFGLHEW AMVYHTDTPRHGLPLRLGAEGTNEVVDKHRIKCTHYDAFRFFTEPARPLNLTVLTREGQP ENDQAGCVHVSMDLYKWAWKLGPLVPGDLFLDTFRLAVAARTLDMEASPYDCREWGFGVV PIETPEGKSEYVRRQRALADASEPLRARLVSQIRYALAATMRNH >gi|227860919|gb|ACLH01000001.1| GENE 39 37776 - 39068 821 430 aa, chain - ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 1 430 1 429 448 536 68.0 1e-152 MSTFADLGLPRDVVRVLDKQGITTPFPIQEAAIPDALSGKDVLGRGPTGSGKTFTFGLPM LSRLAASGVSRPAHPRGLVLAPTRELATQIQQRLEEPAAALGLRVLAVVGGVNINNHIRS LARPVDLLVATPGRAQDLIDQGKLFFDHVAIAALDEADQMADMGFLPQVRKLLKLTPEEG QRLLFSATLDGEVNKLVEQFMHEPVTHSTAPVEAAVDTMEHHLIFIGTREARNDVVLRLG ARKGKTIMFMRTKHGVDRQAKKLRRVGINALPLHGDKGQGSRTKAIEGFADGSVPVLVAT DIAARGIDIADVSLVVHVDPPAEHKAYLHRSGRTARGGESGTVVTLVTDEQRDEVAKLIA KAGVKHTDLDISDRANPASSPELAQMTGARKPKGEPLGPPHQQQPSRQRAGSQGQRRRNP RRRRGNAGQQ >gi|227860919|gb|ACLH01000001.1| GENE 40 39178 - 39993 404 271 aa, chain + ## HITS:1 COG:no KEGG:cauri_1298 NR:ns ## KEGG: cauri_1298 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 271 9 279 279 447 100.0 1e-124 MGMTNPFANPQQPPGGFGQNPQQGQPAHNQATPGFNNQNQRPNASGPAMPQPPEKKSSSK KVLWIVLAVVLVLAIIAAVAIFAAVSFFKDVAADFDEAPRDVAASDDAYWNSTYDADDVD RIRASEVSAPVPEPLIGLSDECYEDTSFFGQSDFLSLDVQWVPTISCIYGPDREFVAQYT ENTDAIRDTESVGLSDSIEDFTSARGSQIADFGEAEEYVIAEVLEDGNAVIEYVMDGYDD NGDEADLNDLATYLVGAGILELTPGGPPVDA Prediction of potential genes in microbial genomes Time: Sun Jul 3 03:54:30 2011 Seq name: gi|227860918|gb|ACLH01000002.1| Corynebacterium aurimucosum ATCC 700975 contig00002, whole genome shotgun sequence Length of sequence - 45408 bp Number of predicted genes - 40, with homology - 39 Number of transcription units - 21, operones - 7 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 236 - 266 3.0 1 1 Tu 1 . - CDS 274 - 1740 1663 ## COG0362 6-phosphogluconate dehydrogenase 2 2 Tu 1 . + CDS 1775 - 2221 370 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 2407 - 2443 -1.0 - Term 2053 - 2093 3.8 3 3 Tu 1 . - CDS 2225 - 3298 911 ## COG0598 Mg2+ and Co2+ transporters - Prom 3343 - 3402 2.1 4 4 Tu 1 . + CDS 3382 - 3984 488 ## COG0500 SAM-dependent methyltransferases + Term 4165 - 4200 -0.5 - Term 3918 - 3946 -1.0 5 5 Tu 1 . - CDS 3981 - 4817 754 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 4838 - 4897 2.0 - Term 4860 - 4897 7.1 6 6 Tu 1 . - CDS 4916 - 6259 1870 ## COG1252 NADH dehydrogenase, FAD-containing subunit - Prom 6286 - 6345 4.4 + Prom 6240 - 6299 2.4 7 7 Tu 1 . + CDS 6445 - 7737 890 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 8 8 Tu 1 . - CDS 7750 - 10671 515 ## PROTEIN SUPPORTED gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative + Prom 10630 - 10689 3.9 9 9 Tu 1 . + CDS 10781 - 11758 980 ## COG0385 Predicted Na+-dependent transporter + Term 11792 - 11839 9.2 10 10 Tu 1 . - CDS 12089 - 13459 1655 ## COG0477 Permeases of the major facilitator superfamily - Prom 13505 - 13564 1.6 11 11 Op 1 . - CDS 14090 - 14254 225 ## cauri_1286 hypothetical protein 12 11 Op 2 . - CDS 14267 - 14968 792 ## COG2353 Uncharacterized conserved protein 13 12 Op 1 . + CDS 14969 - 15427 -142 ## 14 12 Op 2 . + CDS 15467 - 15850 476 ## cauri_1283 hypothetical protein + Term 15881 - 15930 14.1 - Term 15865 - 15919 1.6 15 13 Op 1 . - CDS 15953 - 16594 471 ## cauri_1282 hypothetical protein 16 13 Op 2 38/0.000 - CDS 16618 - 17532 1172 ## COG0395 ABC-type sugar transport system, permease component 17 13 Op 3 35/0.000 - CDS 17536 - 18381 1139 ## COG1175 ABC-type sugar transport systems, permease components 18 13 Op 4 . - CDS 18569 - 19900 2040 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 20143 - 20170 -0.8 19 14 Op 1 . - CDS 20264 - 21508 1172 ## cauri_1278 hypothetical protein - Prom 21528 - 21587 1.5 20 14 Op 2 2/0.071 - CDS 21591 - 22721 1374 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 22812 - 22871 2.2 - Term 22840 - 22880 5.6 21 15 Op 1 2/0.071 - CDS 22928 - 23803 1123 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 22 15 Op 2 1/0.500 - CDS 23832 - 25310 711 ## COG0815 Apolipoprotein N-acyltransferase 23 15 Op 3 . - CDS 25319 - 25912 439 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid 24 16 Tu 1 . + CDS 25971 - 26810 538 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 25 17 Op 1 2/0.071 - CDS 26807 - 27571 432 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 26 17 Op 2 . - CDS 27571 - 28704 890 ## COG0006 Xaa-Pro aminopeptidase + Prom 28555 - 28614 2.2 27 18 Tu 1 . + CDS 28750 - 29379 287 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 29433 - 29462 -0.9 28 19 Op 1 4/0.000 - CDS 29387 - 32200 2198 ## COG4581 Superfamily II RNA helicase 29 19 Op 2 28/0.000 - CDS 32298 - 33287 734 ## COG0805 Sec-independent protein secretion pathway component TatC 30 19 Op 3 2/0.071 - CDS 33478 - 33741 386 ## COG1826 Sec-independent protein secretion pathway components 31 19 Op 4 4/0.000 - CDS 33824 - 34789 1157 ## COG2378 Predicted transcriptional regulator 32 19 Op 5 . - CDS 34782 - 35798 401 ## COG2378 Predicted transcriptional regulator 33 19 Op 6 . - CDS 35830 - 37212 1407 ## cauri_1264 hypothetical protein 34 19 Op 7 . - CDS 37260 - 37451 296 ## cauri_1263 hypothetical protein 35 19 Op 8 . - CDS 37488 - 39032 1618 ## cauri_1262 hypothetical protein 36 19 Op 9 1/0.500 - CDS 39029 - 40603 1655 ## COG0464 ATPases of the AAA+ class 37 19 Op 10 1/0.500 - CDS 40650 - 41486 786 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 38 19 Op 11 . - CDS 41525 - 42787 1192 ## COG1362 Aspartyl aminopeptidase - Prom 42854 - 42913 2.5 39 20 Tu 1 . + CDS 42864 - 43667 905 ## COG2887 RecB family exonuclease 40 21 Tu 1 . - CDS 43695 - 45362 1943 ## COG2759 Formyltetrahydrofolate synthetase Predicted protein(s) >gi|227860918|gb|ACLH01000002.1| GENE 1 274 - 1740 1663 488 aa, chain - ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 12 487 6 483 484 774 81.0 0 MVDMTQTAEKTDLAQIGVVGLAVMGSNLARNFARNGNTVAVYNRSSEKTRALISEHGDEG AFIPSETVEDFVASLERPRKAIIMVQAGAATDAVIDQLTEAMDEGDIIIDGGNALFTDTI RREKEVAAKGRHFVGAGISGGEEGALNGPSIMPGGPAESWETLGPILESIAAEVDGTPCV THIGPDGAGHFVKMVHNGIEYADMQVIGEAYQLLRYGAGMEPAEIAEVFREWNAGDLDSY LIEITAEVLAQQDSETGAPLVDVIVDAAGQKGTGRWTAINGLELGVPITGIAESVFARAL SSATAQRAAAQEGQLPSGTIAELSVDKAEFVEDVRRALYAAKLIAYSQGFDEIKAGSEEF GWNVDPRDLATIWRGGCIIRAKFLDRIREAYDNNADLPALILDPYFKGELENLIDPWRRV VVAATQLGLPVPVFSSSLSYYDSLRAERLPAALIQGQRDFFGAHTFKRVDRDGTFHIEWS GDRSLTEM >gi|227860918|gb|ACLH01000002.1| GENE 2 1775 - 2221 370 148 aa, chain + ## HITS:1 COG:Cgl1418 KEGG:ns NR:ns ## COG: Cgl1418 COG2050 # Protein_GI_number: 19552668 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Corynebacterium glutamicum # 13 147 17 152 154 108 44.0 3e-24 MKHSEIFEKFVAVSQTRPLNDEELQLINSHPQGLAGLIGLRFTHISADEIRSEVDVVPDH HQPWGVANGGLFCTITESTASVGSLILAGKPVVGVNNNTDFLKPVAEGTVTAVATPLYKG RRTQLWEVKISQGDVLLAASTLRTMVVQ >gi|227860918|gb|ACLH01000002.1| GENE 3 2225 - 3298 911 357 aa, chain - ## HITS:1 COG:Rv1239c KEGG:ns NR:ns ## COG: Rv1239c COG0598 # Protein_GI_number: 15608379 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Mycobacterium tuberculosis H37Rv # 3 357 7 366 366 297 42.0 2e-80 MPSVPSPFKPRKKNTSDNSSPSFSVPVERAIEHCRVFIDGEALPGEFTPHSALQAVEEYG RGFVWVGLYEPLESQMTKVAAEFRIHELIVEDVVQAHQRPKLERYDDQLFVVARSVNYRD HDEVADKRQIISTGEIQMIIGDTFIITVRHSAKLPNLAYVIQDEQDLVEQGPISLAWKIL DMMVDRYSEICRLIAIEVDELEEEIFTPNSLPNIDRIYMFKREILEMKHAIVPLSPALRS MVADHKDLIPKTIRSYIRDVNDHQLVVQDHVAGFDERLTSLIDASVAKISMQQNSDMRTI SAVVGMWAAPTLVAGIYGMNFDVMPELHFPWGYYGAIGLMILVVAGMWWWFRRNNWL >gi|227860918|gb|ACLH01000002.1| GENE 4 3382 - 3984 488 200 aa, chain + ## HITS:1 COG:Cgl1419 KEGG:ns NR:ns ## COG: Cgl1419 COG0500 # Protein_GI_number: 19552669 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 1 193 1 193 194 230 58.0 2e-60 MPTWKEVTAANPAHSHNFARKWKTLRAQGKDIDGEARLIDAMSERHSRVLDAGCGSGRLG GELAKRGHTVLGVDVDPILIEHAVNDYPEARWEVGDLSEEEIPEDNFDIAVAAGNVMTFI ATEGREAALRNVFNALRPGGRFVVGYGEGRGWGFEDFLDLARSVGYRVDFIFASWDMKVF KENSTFMVAVLTRPGADLLG >gi|227860918|gb|ACLH01000002.1| GENE 5 3981 - 4817 754 278 aa, chain - ## HITS:1 COG:Cgl1428_2 KEGG:ns NR:ns ## COG: Cgl1428_2 COG0351 # Protein_GI_number: 19552678 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Corynebacterium glutamicum # 10 278 1 268 309 269 57.0 5e-72 MSQPALPRVLSIAGTDPTGGAGIHADLKSFESAGAYGMAVVTALVAQNTQGVRAIHTPPV EFLREQLASVKDDVTIDAVKIGMLGSVAITETVSDFISSLPASVPVVCDPVMVASSGDRL LEPEAERAVRELARRATVVTPNLPELAVLAGVAEPRTFDDALSVATTWAHETDTWVVVKG GHLDGAEADNATVSPSGEIARVPCPRIDTKNTHGTGCSLSSALAARLGAGASLNEALVWA TEWLHEAIEHADALHVGHGHGPVDHGHRLRRLAAEAHS >gi|227860918|gb|ACLH01000002.1| GENE 6 4916 - 6259 1870 447 aa, chain - ## HITS:1 COG:Cgl1430 KEGG:ns NR:ns ## COG: Cgl1430 COG1252 # Protein_GI_number: 19552680 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Corynebacterium glutamicum # 1 447 1 445 467 602 66.0 1e-172 MAQTPHRPSNGRHHVVVIGAGFGGINAVKKLKDADVEITLIDKKNHHLFQPMLYQVATGV ISAGEIAPSTRQILRHQDNVSFVNGEVTDVNIKDQTVTAELDGAVRTYGYDSLIVAAGAG QSYFGNDHFAEYAPGMKTLDDALEIRSRIISAFEKAELEEDPAKREKLLTFVIVGAGPTG VELTGQIAELAQRTFAGTYSNFGSSSAKIYLLDGAPQVLPPFGKRLGRKAQRTLEKLGVD VRLNAMVTDVTADAVTYKNMKTEEEVTIEAATKIWSAGVAASPLGKLIADQAGVESDRAG RVSVNEDLTVGEYKNVYIVGDMISLNRLPGVAQVAIQGGNHVGKLIEAKIDEESTANEAE PFEYFDKGSMAVISRFNAVVKLGKTEFAGFPAWISWLGLHIFYIVGFRSRTLVALHWLLN AFSRDRGNLEITQQQRVARNVIDRDLH >gi|227860918|gb|ACLH01000002.1| GENE 7 6445 - 7737 890 430 aa, chain + ## HITS:1 COG:Cgl1431 KEGG:ns NR:ns ## COG: Cgl1431 COG2230 # Protein_GI_number: 19552681 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Corynebacterium glutamicum # 4 430 8 438 438 410 48.0 1e-114 MYSHLASIDAAAWPGVATVPSPRLLRFKSDRAEAEFAQACSKAGIELEGEDPDVAVLHDA LFSRIADSGWLGLAESYMAGEWTTPDSDRLVKVLLRLLGVGYRPKAKELAVEASSPGELP LDVVKLYAGDSLSHSGGIFASGVPTTVREAVRSYSARVGSKEPKEHFVDVTSVTEPTHTD REDLGDAQRRAAQWLLDATRTGAGTHLLVYPATGLQVAVQAVARRATVDVLTGDTEQQAL FDEQLLLEGAADSVHVQGIETALPNPKQWRGRYDAIVSVEKLETLSPSERRRYVQMLDRS LVSGGRVALGSLFATEAVTPAARSAIQVLRAYIWPGLDYPTLEETHRLFDRRSTLRIIAQ THTGSHYLETLRYQRSFFDGRHREAAAAGFDQVFRRLWTFQFALREALLTLGMLDAVHVV ATHRNRGGRR >gi|227860918|gb|ACLH01000002.1| GENE 8 7750 - 10671 515 973 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative [Francisella tularensis subsp. holarctica FSC200] # 527 967 3 433 436 202 30 2e-51 MSKLLSPDSSRFSRPAGTTSQADAVPARFKNGSPADLVADMEAIVGQENVHGRLSDLVRF SSDAGPYRSIPNIVVSPRNAADLAALMKYCDTHDRHMTFRAAGTSLNGQAMGDDILVDIK THFGGMEVREEGRKLWSRPGVILGDAQAVLSRHGFMLGPDPGSTSVCTIGGVLADNSGGM RCSLERDSYHSIEELIFVLPSGTIVDTSRGDEAFRKQEPKLHADLLAFRDRLRANTEIVE FLRTKFSIRNTNGLRIDAFLDEDEPVHILKRLLIGSEGIFGAITESVIRTVKLPRVKATT WVELPNLRDAANYVHPIMETGAEACELLVAPVMRRSAEHYAHAPESWRDLDDDAAALLVE VGGSDEADLDKAMDRLRTVLADAPLLRPLEFLTTAEGMRGAWELRNGLYGLLGADRPNGT AYITEDVCFPPSQVGEAAADLLDLQAKYGYPESVMGHAAFGNLHFFFTPRFDVEEERESY AAFLDDLAKLVIDKYQGSMKAEHGTGVNMAPFLEHEWGTEAFALFWEVKNMIDPKGILAP NVKLTRDQTIHLRNFKSFPKVEAEINPCVECGFCEPVCPSRHATVTPRQRIVLRREMARQ QEGSAVLEQLQKEYQYDAVDMCAADGTCSIPCPISIDTGAVMKQLRAQQATPAREKVALT TAQRWELVEKLARAGIVSANKIPHKPLELGANMARNVVAPNLLPTVPGPLPQAAPRLPET PREGAGALYFPACINRIFGRPAGAAKDSVDLPRAIVELGRRAGQPVWIPEDVAGDCCGTP WSSKGYKEGFEYQAQKIVRDLWHWSEHGQLPIVVDAASCTHGLLDSVPEVLSPADRKLWE DLRILDVVEWLRDEIAPHLPIVKNMGSIAVHPTCSTNHMGMSQALVDLANLCGEAKVPEG AMCCGSAGDRVMLHPELVESATREERASLDAEHFDAFVSDNRTCEMGLEMISGRTYESIA VLLERASRPVVTP >gi|227860918|gb|ACLH01000002.1| GENE 9 10781 - 11758 980 325 aa, chain + ## HITS:1 COG:Cgl2276 KEGG:ns NR:ns ## COG: Cgl2276 COG0385 # Protein_GI_number: 19553526 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Corynebacterium glutamicum # 5 325 3 324 324 292 54.0 7e-79 MTNPRTEGETGEKLAVYIFPIVIIACAIVAFVSPSTFEPVGQYTSQLLMVIMFSMGLTLT IPDLSLVAKRPLPIFLGVICQFAIMPTSAVLVAKMLGLSDAATVGLILLGSVPGGTASNV MAYLAKGDVALSVAMTSVSTLVSPIMTPVLMLWLAGQTAEVDGAGMMWSLVQTVLIPVGL GLLLRVIASKAVDKVLPALPWVAIAGIGGVVMAVVSKSQDKLVTVGLVVFAGVAIQNLIG FLFGYYLAKIARQREAAARTTAIEVATQNSGLASALALQFFTPEAAIPGVVAAVWANVTG AIFSAIVRRKPIEDDAKAAEVAVTA >gi|227860918|gb|ACLH01000002.1| GENE 10 12089 - 13459 1655 456 aa, chain - ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 18 456 24 462 462 535 67.0 1e-152 MTAVSTTPEKTAAPAQQLTKRDRVRVAVASTIGTTIEFYDFYIYATAAVAVFPFLFFPKT EDPTVALLQSFATFGLAFIARPLGSLLFGHFGDRIGRKATLVGALLTMGIATFIIGILPT YQTAGIIAPALLALMRFCQGLGLGGEWSGAALLASETAKEGKRAFAAMWPQFGAPFGFLL ANGFFLTLVATMDYSRGDTTGTFMEWGWRLPFLASAVMVLIGLYVRLRLEETPVFQQAVD EGKKVKTPMVEAFRTAWKPMIIGTFVMVSCYTLFYLVTTWILSYGIGDKTKGLGLGIPYL EFLEIQLISIFMFIIGIPMSSMLSDKYGRKPILTITSLIMIAFGFSFPYFLGIAHADRNS VLGFLVVGMFIMGLIFGPMSAVLPELFPTNVRYTGSGIAYNVSSILGAAVAPFIATWLVS TYNVSYVGYYLVIVCFISLIAILMMQELKDQDLSQV >gi|227860918|gb|ACLH01000002.1| GENE 11 14090 - 14254 225 54 aa, chain - ## HITS:1 COG:no KEGG:cauri_1286 NR:ns ## KEGG: cauri_1286 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 54 1 54 54 71 100.0 9e-12 MNSRHLIPVLWIRLIVLAGFGIFIWIQDMKLLAAFSVLLVALTAVQLVIAYRQR >gi|227860918|gb|ACLH01000002.1| GENE 12 14267 - 14968 792 233 aa, chain - ## HITS:1 COG:Cgl1441 KEGG:ns NR:ns ## COG: Cgl1441 COG2353 # Protein_GI_number: 19552691 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 24 232 42 250 250 209 53.0 3e-54 MKSILGNRKLIVSIFVILIVASTALALGPLAFSLIMGRGVKTEPINADKVQAATTDVDGE WQVAQGSAHNHTSAGFTIDEILPADKRTTSGSTKHVTGQATIQNGIVEKARIAVGMSSLT TDKKVRDQNMKTKLFEVSKYPESTFTLTEPADVSAVPDDGSLVTVPLTGDLTIHGQTKSV TQDFQVVRDGDTIILGGDIPVNRLDYGIETPEMIAARISETGEINVRVTFEKK >gi|227860918|gb|ACLH01000002.1| GENE 13 14969 - 15427 -142 152 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSQFLKLTSQCDQFGTQFFHFFRTGAFRRRRGDVLGTASKLEEAVTKPVGPLRSQDDSV GWYGRPCDVVALFVRALLARGRAKLAWPSSAALGDLFAAPLAGSRAAPCWLSGLRILCTN HLTHLSPLNRGWEQRQWAVRYNDSSLGDMGRP >gi|227860918|gb|ACLH01000002.1| GENE 14 15467 - 15850 476 127 aa, chain + ## HITS:1 COG:no KEGG:cauri_1283 NR:ns ## KEGG: cauri_1283 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 127 1 127 127 191 100.0 8e-48 MADRVLRGSRMGAVSYETDRDHDLAPRQMVKYRTEDGDIYEVPFADDAEIPEEWMCKNGK LGTLVEGEGVESKPVKPPRTHWDMLRERRSIEELDELLTERIENLRSRRRAAARLLKEQK AQEEGEA >gi|227860918|gb|ACLH01000002.1| GENE 15 15953 - 16594 471 213 aa, chain - ## HITS:1 COG:no KEGG:cauri_1282 NR:ns ## KEGG: cauri_1282 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 213 1 213 213 380 100.0 1e-104 MNRMLGPESKFYAALSLFADLVIVNVLLVITCFPVFTGGMSLRTAHAVTGQMVREEGSRR GSAFVRGLLTRPGVNTAWWLICLAVTALAAYEFAIIAKADLGSIGLVLRAALISGLILLA CVSVWFFHLDAPGLSFRQRSAQAMMKAVGHLPRTLLAVLPGIVLVLYPVFFPAQWGGYLF FLAVLGPALAVYLAELVLQWPELNSQSSDSPSA >gi|227860918|gb|ACLH01000002.1| GENE 16 16618 - 17532 1172 304 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 1 304 1 304 304 532 98.0 1e-151 MTTSTSAQAVPASKKKDHQLPSDNKTRMSGGAKFVVYAILAFFTIVFLGPILFIFINSFK SKFAISSDPFSLPIGETWVGFENFMVGLTKQGFLEATLWSFVITILSVIVIVFFSAMTAY YITRVKTWWTNLLYYLFVVSMIIPFQMVMFPTVKIADMLHLNNPIGIVVLYLGFGSGLSV FMFAGFVKSIPLDVEEAAMIDGCGPLQNYFRVVWPMLKPTAITVAILNAMWVWNDYLLPY LVIGLSTRYKTIPVVIQSFVGSNGNRDMGAMMAMLVLAIIPIVIFYFSTQKHIIEGVAAG AVKG >gi|227860918|gb|ACLH01000002.1| GENE 17 17536 - 18381 1139 281 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 1 281 1 281 281 478 99.0 1e-135 MQATLKKYFPVFVLPTLLAFMIAFLVPFIVGFFLSFTKFTTITNAKWVGIDNYVKAFSQR EGFISAFGFTVLVVIVSVITVNIFAFLLAWMLTRKLRGTNFFRTVFFMPNLIGGIVLGYT WQTMINAVLSHYATTISADWKFGYAGLIMLLNWQLIGYMMIIYIAGLQNVPPELIEAAEL DGVNKWEMLRHVTIPMVMPSITICLFLTLSNSFKLFDQNLALTNGAPGGQTEMVALNIVN TLFNRMNVEGVGQAKAVIFVVVVVVIAYFQLRATRSKEIEA >gi|227860918|gb|ACLH01000002.1| GENE 18 18569 - 19900 2040 443 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 1 443 1 443 443 810 98.0 0 MKRLTRIASISMASMLAAASLVACSGSTDEEGDVYFLNFKPEQDAAYQEIAKAYTEETGV KVKVVTAASGSYEQTLKAEIGKDEAPTLFQVNGPAGFITWQDYMADMSDTEVAKQLTDDI PPLTTEDGEVRGVPFAVEGFGIIYNDEIFDKYIATSGAKIKSTDEITSYQKLKEVAEDMQ AKRDELGIEGAFASTSLTSGEDWRWQTHLANAPIWQEYQDKGVEDTNEIEFSYNKEYKNL FDLYLENSTVEKSLAPSKTVSDSMAEFAQGKAAMVQNGNWAWSQISETSGNVVKEDKIKF LPMYMGLPDEEKHGINVGTENYLGVNSEASEVDQQATKDFVDWLFTSDAGKEHVVKDLGF IAPFESYTAEDTPNDPLAQQVAEAIANKDLTTYPWNFQYFPSQQFKDDFGQDLSQYASGK LKWEDVVKHFKDNWAAEKESNWG >gi|227860918|gb|ACLH01000002.1| GENE 19 20264 - 21508 1172 414 aa, chain - ## HITS:1 COG:no KEGG:cauri_1278 NR:ns ## KEGG: cauri_1278 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 414 1 414 414 796 100.0 0 MKESMSITSSTYASALLTLPWDTPLEQWPDDLIAALPRGISRHIVRFVGINRGIVAVKEI GARTAHHEYKMLRELQRLGAPSVRPVAVITGRHPAEEEYGELTAALVTEHLEFSLPYREI FSRHLTVVEAEKLIRALSVLLVRMHLLNFYWGDVSLSNTLFRRDAETYSAYLVDAETGEF QPNLSESRRLYDVDIARVNIIGELMDLQAGECLDKSIDVIALGGLVESSYLELWTELTAE ESVDASEYWRVSERIDRLNQLGFDVGELKVTKDDSRQVVRIRPVVVDPGHYRAELLSLTG LSVEEHQAQRLLGSIQAYQAVECGPHVGLTQAAHLWMTHEYEPTIAAVPVEMLDKLEPAQ IFHEIVDHRWFLAQERGGDVTLPEATASYLASVLPARRDEARLLSTSPSDEDLS >gi|227860918|gb|ACLH01000002.1| GENE 20 21591 - 22721 1374 376 aa, chain - ## HITS:1 COG:Cgl2410 KEGG:ns NR:ns ## COG: Cgl2410 COG3839 # Protein_GI_number: 19553660 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 376 1 376 376 704 98.0 0 MATVTFKDASLTYPGAKEPTVKKFNLEIADGEFLVLVGPSGCGKSTTLRMLAGLENVTDG AIFIGDKDVTHVAPRDRDIAMVFQNYALYPHMTVRENMGFALKIAGKSQDEINKRVDEAA ATLGLTEFLERKPKALSGGQRQRVAMGRAIVRNPQVFLMDEPLSNLDAKLRVQTRTQIAA LQRKLGVTTVYVTHDQTEALTMGDRIAVLKDGYLQQVGAPRELYDRPANVFVAGFIGSPA MNLGTFSVKDGDATSGHARIKLSPETLAAMTPEDNGRITIGFRPEALEIIPEGESTDLSI PIKLDFVEELGSDSFLYGKLVGEGDLGSSSEDVPESGQIVVRAAPNTAPAPGSIFHARIV EGGQHNFSASSGKRLP >gi|227860918|gb|ACLH01000002.1| GENE 21 22928 - 23803 1123 291 aa, chain - ## HITS:1 COG:Cgl2411 KEGG:ns NR:ns ## COG: Cgl2411 COG0463 # Protein_GI_number: 19553661 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 64 291 1 228 228 436 95.0 1e-122 MSSTHESTLVIIPTYNEIENLPLITGRVRKATPEVHILIVDDNSPDGTGEAADKLAAEDS HLHVLHREGKGGLLGAYIAGFEWGQEKDYQVLCEMDADGSHAPEQLHLLLEEIQKGADLV IGSRYVPGGETVNWPANRELLSRLGNKYISVALGAGINDMTAGYRAFRRELLEHLDFEKL SNAGYIFQVDVAFRAIKDGFDVREVPITFTERELGESKLDGSFVKDSLLEVTKWGVSHRS EQISDFTSEVSKITSRTVKDMELGPKVSTAKNAVSDFVSEVSNLVKGTFKK >gi|227860918|gb|ACLH01000002.1| GENE 22 23832 - 25310 711 492 aa, chain - ## HITS:1 COG:Cgl1445 KEGG:ns NR:ns ## COG: Cgl1445 COG0815 # Protein_GI_number: 19552695 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Corynebacterium glutamicum # 4 492 6 518 545 474 52.0 1e-133 MCARLVLAALSGAVTYLSVEPRGWWAAGIIGVAMLVAALSPWRKPLHLGWAALIAVVHSA VLYLFTLPWIGELVGNMPYIALAIFLSLYSILLGIGGAALLRLNYGFALFPFFYVAVEML RSSVPFGGFAWVRLAWGQIEGPLANLAPWGGPALISFAVVCVAAGVVGLARAPRLACAFL AVPLLAGLIAAQGVNRPIHTTGTVTVAAVQGNVPRLGLDFAAQRRAVLDNHVRVTEQAAQ DGARPDIVMWPENSSDINPFANEDARALIDGAAHDIDAPILVGTLTRDEVGARNTMQVFN PDGSVGQHHYKKYLQPFGETMPMREFFRKITDLVDLAGDMKPGDGSGVVTMAGTAVGVAT CYEVSFDQAFRTAIDNGAQILTTPTNNATFSDSDMTYQQLAMSRLRALEADRAVVVAATS GVSAIVHPDGSVSQDSGIFEPAYLEEELPLREGRTFAVRYGSLLQWLMTIIGTVCALFAI YSTRLSGRRSAS >gi|227860918|gb|ACLH01000002.1| GENE 23 25319 - 25912 439 197 aa, chain - ## HITS:1 COG:Cgl1446 KEGG:ns NR:ns ## COG: Cgl1446 COG3030 # Protein_GI_number: 19552696 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Corynebacterium glutamicum # 1 195 1 183 191 138 42.0 8e-33 MVGCMPFLLFIAYILLETLAFWAVAEWIGVLWALLALALTMLFGMTIASWEVRRMMVSRI RQTEDGVYVMEDPNPGKTAGNVGLTMVGGILLSLPGFVSTIIGALLIFAPTRSIIRTLLA ASMFRKIEDMGVRVYEASPMAQHRDSYGSFGSFGAGATGSAMGGRGQADHTHEVLDEDEI RTWTQHVKPEDFEDGNK >gi|227860918|gb|ACLH01000002.1| GENE 24 25971 - 26810 538 279 aa, chain + ## HITS:1 COG:Cgl1448 KEGG:ns NR:ns ## COG: Cgl1448 COG0155 # Protein_GI_number: 19552698 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Corynebacterium glutamicum # 18 279 24 256 258 86 31.0 7e-17 MSLPESKHPESDTLRFHPAGGVVTPEQWLALGQAAREHGDGHVYLEEHSVISLRGIRDEQ VLGDVPLPNTDAHVLASPLSLHARRVAQRVADALAAAEGASPALSRDAVFGIDGGAGDLL SHGVAAGLQLSGASTGDGEDAGSARLIREGAATGPALDLEEAISQLVGYVLEVSNGLPEA LDSFAFSARTTTAQPVLPIGWLTDHTKPGRVDLGAGLQDGVLPGEYAGLIAQLGASISVT PWRGLVIHDLPEGDADVVLRVLAPRGFIFDANSPALGRP >gi|227860918|gb|ACLH01000002.1| GENE 25 26807 - 27571 432 254 aa, chain - ## HITS:1 COG:Cgl1450 KEGG:ns NR:ns ## COG: Cgl1450 COG1028 # Protein_GI_number: 19552700 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 3 254 2 246 246 280 62.0 2e-75 MGALLILGGRSDIGGELARRLCAGRPVVLAARGEHGMDELTSELLRNGAVSVHTLSFDAA DVSTHRSVIEQATALAGEEITTAVVAFGILGDQERAEHDEAHAFDIALVDYAAQVSMLTV LADVMAKGHIVAFSSIAGWRARRTNYVYGSTKAGLDAFCQGLADRLHGSDLALITARPGF VIGSMTEGMKPAPLSVTPGVVAQAVVKAIESSSGTQSSSDSRPVSRTLWIPRKLQLLAWI MKLVPRPIWRHMPR >gi|227860918|gb|ACLH01000002.1| GENE 26 27571 - 28704 890 377 aa, chain - ## HITS:1 COG:Cgl1451 KEGG:ns NR:ns ## COG: Cgl1451 COG0006 # Protein_GI_number: 19552701 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Corynebacterium glutamicum # 4 377 14 379 379 358 52.0 7e-99 MTDYASRLSRARAIAAAKNIDVLLVGTGAEFAYLTGSWVSSHERLTCLVIRPDAEPIIVA PSTDIESLQGVAAHLVGWSDGHDPYALALEGVRPSTVALGSSLTADHVLRFQSAIRGQLN PLSPSSTSSTDVPQVEYLLATEALAELFTRKDPDEVAELRAAAAAIDAVHAEVPRLLKPG RTEAEVAADLRELILREHREVDFIIVGSGPNGANPHYDYGDRELGAGDPVVVDIGGTLAS GYHSDCTRTYVVGADPSAAPTDFQEAYAVLEKAQAAGRAAARPGTTAQGIDRATRSVIEA AGWGEYFTHRTGHGIGLSTHEEPFIMEGNELELSQSMAFSIEPGIYVPGKWGMRLEDIVV TTESGYESLNQAPRGLR >gi|227860918|gb|ACLH01000002.1| GENE 27 28750 - 29379 287 209 aa, chain + ## HITS:1 COG:Cgl1452 KEGG:ns NR:ns ## COG: Cgl1452 COG0265 # Protein_GI_number: 19552702 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Corynebacterium glutamicum # 8 202 7 210 213 74 32.0 1e-13 MNSHPAAVKIRTRRSYCSGVLIDASLRPCTQQATRLVLTCAHFFRDDLDKGDHYKVSGGF NRRVVAARTIDGTDMALCLLDKPAPPRNLPGLAHSTPPFRAPVSTWGYGGRARRAQKRTG LFLLPFFRTWSVDFLTTVSPAGFVFNTNPAVKGDSGGPALVDGSVIGTQALILNPLGRNL KLATVALVAPHRAAIAAAATALLGREYED >gi|227860918|gb|ACLH01000002.1| GENE 28 29387 - 32200 2198 937 aa, chain - ## HITS:1 COG:Cgl1453 KEGG:ns NR:ns ## COG: Cgl1453 COG4581 # Protein_GI_number: 19552703 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 4 937 9 929 929 1294 70.0 0 MTLTHLDEFTQALPYSLDDFQIQGCQAVEAGHGVLVCAPTGAGKTVVGEFAVSLALRQGT RCFYTTPIKALSNQKYHDLVDAHGADAVGLLTGDVSINSSADILVMTTEVLRNMIYAGSG ALDRLTHVVMDEIHFLADASRGAVWEEVILNLEEHVSIIGLSATVSNSEEFGRWLTTVRG DTKVIVTDKRPVPLDQWMMVGRKIYPLFEPNSGGQVNTELARRIQRLEAGDTDSGRADYA QNRASFRARARHKGGGRSDRHSDRRSGAPRAQDRYRPLGRPEVLKELQAMEMLPAITFIF SRAGCDGALYQCLRSRMVLTSQEEATEIKAIVDTGVEGIPEEDLKVLDFKRWREALSRGF AAHHAGMLPAFRHIVEELFVKGLVRAVFATETLALGINMPARTVVLEKLVKFNGEAHVDL TPGQYTQLTGRAGRRGIDTLGNAVVQWAPAMDPTAVAGLASTRTYPLISTFEPGYNMAIN LLGMLGFDDSLRLLEKSFAQFQADGSVVEETREIERAEHRVRELRAQLDQAVDNLAPPAA DGEDPAELLMDYMRLRRALTDEEKSARSSKKEERNKEVAAVLARLQVGEVIAIATKKRPT LAVVITPANQTADPRPWVTTETGWSGRIDAAGIDNPPIVVGHMKLPRAAQKNPRRHTRFV KEAFKRDYYKRPKKMRTEPRNRPNKKIAQLRDALREHPVHNWPATDREQLAGVAQKLARR ERELHKLEAKVERATDTLGRTFERIVDLLAEMDYVEFEGYGEDREPVITDEGERLAKIHS ESDLLVAQCLKRGIWNDLDPAELAGVASLCVFENRKTTRGEPGAASDAMADAMDATWRIY TELVADEKRHNLPQTREPEPAFALAIHQWTAGAPLAYCMAAANESGAELTPGDFVRWCRQ VIDLLQQVAKTGYEDEIRRNARRAIDAIQRGVVAIGA >gi|227860918|gb|ACLH01000002.1| GENE 29 32298 - 33287 734 329 aa, chain - ## HITS:1 COG:Cgl1454 KEGG:ns NR:ns ## COG: Cgl1454 COG0805 # Protein_GI_number: 19552704 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Corynebacterium glutamicum # 1 290 1 290 314 349 58.0 5e-96 MTLVQHLQELRRRIVISLLAFVVGAIVGFIWYQHAPFGMSPLGEILRGPYCSLPEESRVS FSADGECRLLATSPFEMLMLRLKVGALAGTVLSSPVWLYQIWAFIVPGLHKNERRFTFLF VSTAVLLFVLGAVLAYVILSVGLEFLMGMGSEYQTAALTGERYFYFLLALLLIFGVSFEI PLLVVCLNLIGVLEYDHVKDKRRIIIVVIMIFAAVVTPGQEPFSMLVLAGALVVLVEIAF QFCRINDKRQKRQRPDWMDLDDETASSLDEGTGAIGAPTPVSASTSVSASSRPVSSRPVP PASTGETRVPQPEHKNTQPPQSGFFDDVL >gi|227860918|gb|ACLH01000002.1| GENE 30 33478 - 33741 386 87 aa, chain - ## HITS:1 COG:Cgl2993 KEGG:ns NR:ns ## COG: Cgl2993 COG1826 # Protein_GI_number: 19554243 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Corynebacterium glutamicum # 4 55 5 56 60 57 50.0 5e-09 MTVGPMEIGLIVLVIVLLFGAKKLPELARSMGRSMRIFKSEVNEMREENNSAQQQGQIAA SKKNDEDFWNSPEMQPRTSNPADGNQN >gi|227860918|gb|ACLH01000002.1| GENE 31 33824 - 34789 1157 321 aa, chain - ## HITS:1 COG:Cgl1456 KEGG:ns NR:ns ## COG: Cgl1456 COG2378 # Protein_GI_number: 19552706 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 1 316 1 322 327 188 39.0 1e-47 MVDQPRKLQSLVRSLNLIPYLRNHPGLTPMEAAEDLGMTPAELKDAIDRLFCSGVGRNTE DLIDLSFSYRDGIEIYNDQGLTQALRLTPTEAGALLLTLESLEAMPGLVDVSAVHSAAAK LREIMDEKTAAIYDSLATTDPEESEVQAALAGAVDKRRQVRFTYWSMSSNRTSERTVHPA RIFIVDGEPYLVAWDESVGEHRTFRLDRMSDVEVLDATATPRVRELDFNPDSPFGLDHTL VAELEIHQEFTWLAEHYDITLEEPLENGFIAATMPVGSEAWFSRFVLGQADRMRVVGPPK LIDAISQHRKRALERYTQLPD >gi|227860918|gb|ACLH01000002.1| GENE 32 34782 - 35798 401 338 aa, chain - ## HITS:1 COG:Cgl1457 KEGG:ns NR:ns ## COG: Cgl1457 COG2378 # Protein_GI_number: 19552707 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 14 321 4 316 324 228 46.0 9e-60 MPSADRTAARTPVRDRAIERLTNLTFALHGAAHQGGVPDRSAAWIRSHVEGYQSRSDEAF HKQLSRDILTLQRAGVPVVHSSGVEGSLYRLDPESYQLPPVDFTPEEAMVLGVAGGIGTP GGLSDFSLSAWTKLAASGASRDLSGAPIYTAVNDMTRLSPELVTGVITAVRAGLRISFDY HATPSAEAVRRHMDPWGLVNHRDRVYLVGWDVDRDAPRTFRATRVDNVRRSRAAATHLEP TAPLQELVVEALDRGDTVDALLEVPQGQAAELVDAGCRREDNLVELTGVQRDWLVRTAAG YAPDVVVIEPPEVRADIIALLSVGDTPSSASGEEARHG >gi|227860918|gb|ACLH01000002.1| GENE 33 35830 - 37212 1407 460 aa, chain - ## HITS:1 COG:no KEGG:cauri_1264 NR:ns ## KEGG: cauri_1264 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 460 16 475 475 899 100.0 0 MGIETEYGITASASNGQRVMSPDEIARVLFRPIVSKYSSSNIFSPNASRLYLDVGSHPEI ATAECDSLSQLIAYERAGDAMVNRMAVQAEETLADEGEKRAVYLFKNNVDSAGNSYGCHE NYLIGRHVVLKDLGKALLPFMITRQLICGVGMIRPAKGDDPACFVLSQRADQVWEGVSSA TTRSRPIINTRDEPHGDSKRFRRMHVIVGDSNMAEPTMALKVGSTLLMLEMLEAGFEVPN LSVLEPIQHIRAIALDPTGRTELPLEGGGSTTALAVQQELCTAAERWLEHREEAGTPTTE LARVVDLWKRTLQAIDTQDFSSVDREIDWVIKRSLLNRYRDRLGGDWAHPKLAQIDLTYH DIRPGRGLYSVLEQRGMVERWIDDAAIDAAIDTAPQTTRAKLRGEFLAVARELDAAVTVD WTRMKVNRPEPMTEEFSDPFVSEDPRLDGLLDYMRSHPGS >gi|227860918|gb|ACLH01000002.1| GENE 34 37260 - 37451 296 63 aa, chain - ## HITS:1 COG:no KEGG:cauri_1263 NR:ns ## KEGG: cauri_1263 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 79 100.0 4e-14 MSGQQSQINAGGGNGQGGDTPEFDAGQVSINSAGTDDLLDEIDGLLESNAEEFVRSYVQK GGE >gi|227860918|gb|ACLH01000002.1| GENE 35 37488 - 39032 1618 514 aa, chain - ## HITS:1 COG:no KEGG:cauri_1262 NR:ns ## KEGG: cauri_1262 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 514 1 514 514 980 100.0 0 MSRVLGTETEYGISTPSNPALSPIVTSTHAVVAYAALHTGARSRWDFREEHPLRDSRGFD LKRYHTVPVVDPNALGVANVVTANGARFYVDHAHPEYSSPECTNAWDAMLYDAAGDLILR RAGEAVASLTAQGTSVLATHDPCPPLKFYKNNVDGKGASYGSHENYQYSRDTDFEDIAQG LIPFFVARQVVTGAGRMGLGADGEEPGFQLSQRADYIEQEISLETTLNRGIINTRDEPHA VAEDFGRLHVIIGDATMSHTSTLLKLGMTSLVLDAIESGADFSDLRLAEPVEEVQRVSRD LTLTHQLALRDGRRLTALELLAVYRERVTATSEADEKVLAAWDEVVELLADNPLKAAHLL DWVAKYRLIKGYLDRGVAADDPKLALIDLQYTDIDPAKSLYHALVRKGQMRTLVSEEEIA AAADTPPADTRAYLRGHATRKFGEDVLAASWQSLTFRIGEAEGANSGTACVALDDTTRLG QDEVCALLESVDNAADFVDSLRQLGVRIEYPTLY >gi|227860918|gb|ACLH01000002.1| GENE 36 39029 - 40603 1655 524 aa, chain - ## HITS:1 COG:Cgl1461 KEGG:ns NR:ns ## COG: Cgl1461 COG0464 # Protein_GI_number: 19552711 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Corynebacterium glutamicum # 7 520 27 525 526 552 58.0 1e-157 MNDATHSQELGQQRRQIEQLAERNAKLAALLKDARTKLQQMLAEVDALAEPASTYGVFLG YSGRAHDSRRDAEVYTNGRAMRVKISPNLEPGSLKVGQQVRLGEGFVIVEACAPVNTGAL ATLQERLGTDRAVVINSSGEEQVILLAAALRDTVRAGDTLLVEPKSGVATERVHKTEVAQ LTLEEVPDVSYEDIGGLDEQISLIRDSVELPFLHPELYRKYDLQPPKGVLLYGPPGCGKT LIAKAVAHSLSVSLGATAPSYFLNVKGPELLNKFVGETERRIRLIFERARELASEPTEDG SQRPVIIFFDEMESIFRTRGSGVSSDMETTVVPQLLTELDGVEKLSNVIVIGATNREELI DPAIMRPGRLDIKIRVNRPTKQGAREIFARHFPESVPHEGDLSQLIDTAVEDLYAERPFV TLHFANADPRVLHYRDFVSGAMIANIVSRAKKLAIKEALDAATTSEGAQPAGITAAHLHQ AIAAEQAESEYVPTSANPEEWAKIVAGTSAGAHVTGVELMGVKP >gi|227860918|gb|ACLH01000002.1| GENE 37 40650 - 41486 786 278 aa, chain - ## HITS:1 COG:Cgl1462 KEGG:ns NR:ns ## COG: Cgl1462 COG2519 # Protein_GI_number: 19552712 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Corynebacterium glutamicum # 1 278 1 278 278 469 80.0 1e-132 MAYSGPFRYGDRVQLTDAKRRHYTIVLEEGGQFHSHKGIINHDDVVGMDEGSVIDSTLGS SFLLFRHLMVDHVLSMPRGAAVIYPKDSAQILVEGDIFMGARVLEAGAGSGALSMTLLRA VGPEGHVFSYEVRDDHLEYAVDNVTEYFGKQPEWWSPRLGDLADVTVEELGGPVDRVILD MLEPWEHLEKVRDILIPGGVFMTYVATVPQLMKVMEGIRELKCFTEPRAWESLVREWKVE GLATRPEHRMNAHTAFLIWTRRLADGVTPPRPQRRARK >gi|227860918|gb|ACLH01000002.1| GENE 38 41525 - 42787 1192 420 aa, chain - ## HITS:1 COG:Cgl1463 KEGG:ns NR:ns ## COG: Cgl1463 COG1362 # Protein_GI_number: 19552713 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Corynebacterium glutamicum # 1 419 1 419 420 513 62.0 1e-145 MSTTQDFLDFIAASPSSYHAAEEVARTLVDAGFSRQDESAEWSAAPGGHVMVRGGAVMAW FVPEGAGPDSGFRIIGSHTDSPGLALKPTPDFDSAGWQQVAVEVYGGVLLHSWFDRELTV GGQVVLRDGTRHLVNTGPLLRLPSLAIHLYRKDEFKPDRQRHMQPVLSVGTPETSVMGAV GKQLGVDPEDIASFNLITADAQRGEVFGAGEKLIAAGRMDNLSSVHASLRALLAAAKNAD SIEHKDILVMAAFDHEEVGSSSRYGAGGPILGDILTRTARALGANEEQRFQMFARSSCVS ADAAHSVHPNYAEKHDPTHHPIIGQGPVTKINGNQRYASDANTVALWESACRRADVPVQR FVGNNDVPCGSTIGPISATRLGIPTVDVGVPMLSMHSARELVGERDQLWLGNALEAYLVG >gi|227860918|gb|ACLH01000002.1| GENE 39 42864 - 43667 905 267 aa, chain + ## HITS:1 COG:Cgl1464 KEGG:ns NR:ns ## COG: Cgl1464 COG2887 # Protein_GI_number: 19552714 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Corynebacterium glutamicum # 2 267 12 277 278 414 76.0 1e-116 MPKRLALSPSRASDYKQCPLLYRFRAIDKLPEPKTKAQVKGTLVHAVLEKMHQLPREQRE YPAAVKMIKPEWAVMLESDPELRELVPEPEELDFFVEARELIKGYFQMENPQGFDAHECE MYVDTVLPNGVPVRGFIDRVDVAPTGEVRVVDYKTGKKPLPRYSQDAQFQMNFYALVYWR LLGTIPTQLRLMYLKVLDSMFLTPGPEELEYFERDLGELWAKIEGDGKTGDFRPKTSKLC GWCSFQDLCPAFGGTPPEYPGWPGQSS >gi|227860918|gb|ACLH01000002.1| GENE 40 43695 - 45362 1943 555 aa, chain - ## HITS:1 COG:SA1553 KEGG:ns NR:ns ## COG: SA1553 COG2759 # Protein_GI_number: 15927309 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Staphylococcus aureus N315 # 3 555 2 555 555 634 59.0 0 MTTQPSDVEIAQAHQLEPITDIAARAGIPAPALIPYGQHKAKVDITQVGDTPANGKLVLV TGVSPTPAGEGKSTVLIGLTDALTQLGKKAIVALREPSQGPVMGIKGGAAGGGYSQVVPM EDINLHFTGDFHAISAATNTLAAIIDNHIHQGNALNIDPRRITWQRCIDVNDRALRNVVT GLGGPAHGVPGETGFTITAASEIMAILGLATDLADLKKRLGDITVGYTYDQKPVTARELG AEGALTALMRDALNPNLVQTLGGTPAFVHGGPFANIAHGCNTLLATQTAMRFGDIVLTEA GFGADLGGEKFMDIKSRFGDLDVAGAVVVATIRSQKYNGGQPREELTTENLEALKKGVVN LERHVENLRKFGLQPVVALNLFWSDTEAEREFMRQWAADFKVALEEAEVWAKGGAGATAL AERLLDNLSEGSSRQLYDPSEGIEASIDTIATEIYRAERVEYSSKALKDLKYIKDNGWEQ FPVVISKTQYSFSDDPSQLGAPEGHVLHVRELQPRTGAGFIVALTGDVMTMPGLPKKPAA NNIDVAADGSISGLF Prediction of potential genes in microbial genomes Time: Sun Jul 3 03:55:14 2011 Seq name: gi|227860917|gb|ACLH01000003.1| Corynebacterium aurimucosum ATCC 700975 contig00003, whole genome shotgun sequence Length of sequence - 11435 bp Number of predicted genes - 14, with homology - 11 Number of transcription units - 5, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1256 1467 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 1344 - 1403 2.1 2 2 Tu 1 . + CDS 1291 - 1467 76 ## + Term 1517 - 1569 2.9 - Term 1460 - 1516 23.1 3 3 Op 1 1/0.000 - CDS 1561 - 3093 2139 ## COG1027 Aspartate ammonia-lyase 4 3 Op 2 3/0.000 - CDS 3185 - 4030 813 ## COG0040 ATP phosphoribosyltransferase 5 3 Op 3 1/0.000 - CDS 4095 - 4358 367 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 6 3 Op 4 . - CDS 4418 - 5143 592 ## COG0637 Predicted phosphatase/phosphohexomutase 7 3 Op 5 . - CDS 5144 - 5527 418 ## cauri_1251 hypothetical protein 8 3 Op 6 1/0.000 - CDS 5552 - 6796 1404 ## COG0215 Cysteinyl-tRNA synthetase 9 3 Op 7 . - CDS 6847 - 7698 922 ## COG1968 Uncharacterized bacitracin resistance protein 10 4 Op 1 . + CDS 7921 - 8805 845 ## cauri_1248 prolipoprotein LppL 11 4 Op 2 . + CDS 8852 - 9964 1239 ## COG0167 Dihydroorotate dehydrogenase - Term 9996 - 10038 3.2 12 5 Op 1 . - CDS 10050 - 10175 109 ## 13 5 Op 2 . - CDS 10187 - 10444 103 ## 14 5 Op 3 . - CDS 10468 - 11031 485 ## COG1881 Phospholipid-binding protein - Prom 11278 - 11337 80.3 + TRNA 11252 - 11337 58.1 # Leu GAG 0 0 Predicted protein(s) >gi|227860917|gb|ACLH01000003.1| GENE 1 2 - 1256 1467 418 aa, chain - ## HITS:1 COG:VC2699 KEGG:ns NR:ns ## COG: VC2699 COG2704 # Protein_GI_number: 15642694 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 37 418 54 434 451 392 64.0 1e-109 MVVVHILIVLAAIYLGARIGSIGIGMAGGLGVLLLGLTGVPVTREDIPFDVIGIIMTVIA AIAAMQRAGGMDYLVYLAEKFLRKNPKKITFYAPVVTWLMTVLAGTGHTAFSTLPVIVEV AKEGKVRPSRPLSIAVVASQMAICASPISAAVVLLAGLLEPMGVGYLQILAVLIPATFLS IFPAAWIANRSGAELEEDPVYQERKAQGLVKMPQGSHNYSPMQGAKTSVIIFLVAIVIVM LWATLTSSQVGLIEEPTLPRNEAIMTVMLTAATLIVMITKISAGDVLNTPVFKSGMSACI CVLGVAWLGTTLINHYMEDIQAISGSVIESAPWLLAIVLFFAAALLYSQAATTKALMPAA LALGVNPLTAVAAFPAVSALFILPTYPTLLAAVEMDDTGSTRIGKAVFNHPFIIPGTV >gi|227860917|gb|ACLH01000003.1| GENE 2 1291 - 1467 76 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGNSRGGQNTTMARELTVFILPYLCGFSEYSGPIVSVSTKARTSGWVLKEGVILGQV >gi|227860917|gb|ACLH01000003.1| GENE 3 1561 - 3093 2139 510 aa, chain - ## HITS:1 COG:Cgl1467 KEGG:ns NR:ns ## COG: Cgl1467 COG1027 # Protein_GI_number: 19552717 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Corynebacterium glutamicum # 1 509 1 525 526 779 74.0 0 MAKTTKKDAQAEAKETKDVKAQVEEKATNKSSKSTSSKKTRTETDLLGSVEVPSDAYYGV HTLRAIENFQISYVTINTIPDFIRGMVQVKKATAMANRRLHVLPKKKAEAIIWACDQILE EGRCMDQFPLDVFQGGAGTSLNMNTNEVVANLALEYLGEEKGSYDVINPNDDVNMSQSTN DAYPTGFRLGIYYAMEDLIERIDTLQAAFHAKGNEFVDILKMGRTQLQDAVPMTLGDEFK AFAHNLAEEQAILRDAQKRLLEINLGATAIGTGVNTPAGYRHQVTAALSEVTGLEIKTAR DLIEATSDCGAYVLLHSTIKRAAMKLAKICNDLRLLSSGPRAGLAEINLPPRQAGSSIMP GKVNPVIPEVVNQVCFKIFGNDHVVTMAAEAGQLQLNVMEPVIGEALFQSIRIMGNAVDT LREKCVVGITANADVCRAYVENSIGIVTYLNPFIGHHNGDMIAKESLKTGKGVKELVLEK GLLDEETLNKVLSVENLMHPEFRGQLYIDE >gi|227860917|gb|ACLH01000003.1| GENE 4 3185 - 4030 813 281 aa, chain - ## HITS:1 COG:Cgl1468 KEGG:ns NR:ns ## COG: Cgl1468 COG0040 # Protein_GI_number: 19552718 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 1 280 1 280 281 383 71.0 1e-106 MIKIAVPNKGSLSEAALEILKEAGYKGRGHNKSLNVVDEENGVEFFFLRPKDIAIYVAQG VLDLGITGRDLALDSRAKFNEVLALNFGGSTFRYAAPAGEEWDVAKLQGKRIATSYPNVV RDHLAANGIDAEVIRLDGAVEISIHLGVADVIADVVSTGTTLRQQGLEPFGEPIVTSEAV VIKREGEDVTADENVVLSRIRGILNARHYVMLDYNVAEEKLPNVEAVTPGLTGPTISPLA REGWVAVRVMVPRKLANQVMDSLEELGAEAILASDLRIARF >gi|227860917|gb|ACLH01000003.1| GENE 5 4095 - 4358 367 87 aa, chain - ## HITS:1 COG:Cgl1469 KEGG:ns NR:ns ## COG: Cgl1469 COG0140 # Protein_GI_number: 19552719 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Corynebacterium glutamicum # 1 87 1 87 87 114 71.0 5e-26 MKNFESLFEELSQKIAERPEGSGTVEAFDKGIHHLGKKIIEEAGEVWIAAEYQSDEELAE EMSQLLYWLQVMAHKRGLKLEDIYSYL >gi|227860917|gb|ACLH01000003.1| GENE 6 4418 - 5143 592 241 aa, chain - ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 15 238 4 224 231 219 52.0 4e-57 MTDTDQTARIRRPAAIFWDMDGTLTNSEPLWEEATFYLSETLGRRLTPTERLATVGATFE DTLAICADKAGVELQPGDSERYHMLMFDYVKSLFAERLEIFPGISELLGELKDAGMPMMV TTNTERYVADSAIAALGRDYFVDTLCGDEVPHGKPAPDMYAEAARRVGARPQDCLVFEDS AAGMRAAVAAGCSVIGLPEGEHVTVPEEVTVISELRGSGHHHLEGTTARDVYEWFQRLHS L >gi|227860917|gb|ACLH01000003.1| GENE 7 5144 - 5527 418 127 aa, chain - ## HITS:1 COG:no KEGG:cauri_1251 NR:ns ## KEGG: cauri_1251 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 127 1 127 127 190 100.0 2e-47 MTIRAEFQPTVDEFMSNLQSFATGDYLKEEEKEFWEAPFDAAVLPDLRFILESFLEALDK LPDDPDGGLLGAAVRPSVEKLAAFNRKNADAVLEPEEKEELTELIHSASAATGADDEALA QLPELDF >gi|227860917|gb|ACLH01000003.1| GENE 8 5552 - 6796 1404 414 aa, chain - ## HITS:1 COG:Cgl1478 KEGG:ns NR:ns ## COG: Cgl1478 COG0215 # Protein_GI_number: 19552728 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 414 1 420 420 550 65.0 1e-156 MQSWPVPHIDSVPGTPSPLHLYDSADGEVKRLNIKGETATMYVCGITPYDSTHLGHAATY LTFDLIYRQLLDNGYKVNYAQNITDVDDPLFERAERDGVDWRELGTSQINLFRSDMELLS VFPPQHFVGAMEAIDEITEMVQALLDAGAAYVVDDPDYPDVYASIEATKNFGYESNYSRE QMETFFAERGGDPERPGKRDPLDALIWRAHREGEPAWESPFGPGRPGWHIECSAIATNRL GSSFDIQGGGSDLKFPHHEFSAAHAEAALGVERMAQSYVHTGMIGLEGTKMSKSLGNLVF VHKLVEAGVDPSAIRLGVFSGHYREDRDWSDEVLHTAQERLERWRAASRNPGTVEEIKEV VHNVRLALAEDLDTQRAIAVLDQWAEQALGAAEASEEASDVLRTAVNSLLGVRL >gi|227860917|gb|ACLH01000003.1| GENE 9 6847 - 7698 922 283 aa, chain - ## HITS:1 COG:Cgl1479 KEGG:ns NR:ns ## COG: Cgl1479 COG1968 # Protein_GI_number: 19552729 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Corynebacterium glutamicum # 7 267 17 277 293 372 74.0 1e-103 MTTTATTDAMTWVQVIVLSLVQGLTEFLPVSSSGHLRIVSTLFWGQDAGASFTAVIQLGT ELAVIVYFAGMIWQILKGWFVGLVHKEQRGQDYRMGWMVIVGSIPIGILGVLGKDLIRDN LRNLWVTASMLVLFSFVFIIAERVGKKERSFEELTMRDAIVMGLCQCLALIPGVSRSGGT ISGGLFLGLDREVATRFSFLLAIPAVMASGLFSLGDAFGPTVGQSATGAQLLVGTLIAFV VGYASIAWLLKFVGSHSFEWFAAYRIPVGLLVMLLLGLGVLAP >gi|227860917|gb|ACLH01000003.1| GENE 10 7921 - 8805 845 294 aa, chain + ## HITS:1 COG:no KEGG:cauri_1248 NR:ns ## KEGG: cauri_1248 # Name: lppL # Def: prolipoprotein LppL # Organism: C.aurimucosum # Pathway: not_defined # 1 294 50 343 343 513 99.0 1e-144 MGTIVPFDAVSDLAAVGDILAVRTEDSLSVGSAADFEEDKATKLSVDQKCGDLTASEKHF LLACGQKVMLIDPHKPDSPQELAVDEEQPVTVVAEASSGEVFVGSKDSTTVGVYRDGERS TGITVEAGSDQLISVPVSDGADGIVRVLREDSTIQSLDWEKDRAGGRLRVGQGVGQISGG DGAVVVASDTVGKRVAIYTASDVIRLHQYGNTGGTPWGVAWDAGRKLAWVTTTDNNLLHA FTVSAGVPENVGTMDTVADARTIAVLGDGTLVTASASGEGLQFITDPELDTTSR >gi|227860917|gb|ACLH01000003.1| GENE 11 8852 - 9964 1239 370 aa, chain + ## HITS:1 COG:Cgl1482 KEGG:ns NR:ns ## COG: Cgl1482 COG0167 # Protein_GI_number: 19552732 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Corynebacterium glutamicum # 4 368 5 369 371 519 73.0 1e-147 MQYSALDRARHAAYQAALKGMFKLDPERIHGIINGGLAIFQAGGPLNRALGKVVPVNDPV LEQEVFGVRFPRPLGLAAGFDKNAAAADVWTPFGFGYAELGTITPKAQPGNPAPRLFRLK ADKAILNRMGFNNEGALAAARNLRKRRYNDVVGINIGKNKVTDAEHAVDDYRQCASVLGD LADYVVVNVSSPNTPGLRDLQAVESLRPIMEAVVESTSSPVLVKIAPDLSDEDIDAVADM AVEVGLAGIVATNTTISREGLSTPADEVAAMGAGGVSGPPVAERSLEVLKRLHARVGEKL VLVSAGGISTPEQAWERITAGASLLQGYTGLIYGGPDWIRDIHRGIAQQIHAHGLSTISE AVGSGLGWID >gi|227860917|gb|ACLH01000003.1| GENE 12 10050 - 10175 109 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIIASRALPGTVLTTMGQYVVFLYAVAAGLCAVIIRRTLR >gi|227860917|gb|ACLH01000003.1| GENE 13 10187 - 10444 103 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRNSDTNPTTDGVDIPAALRVGGAFMLLAAVLALFGLVSIFTDGGAPPLSGRGAASPSL VRRCLSAHSAPNAAISAAAASKSLR >gi|227860917|gb|ACLH01000003.1| GENE 14 10468 - 11031 485 187 aa, chain - ## HITS:1 COG:Cgl1487 KEGG:ns NR:ns ## COG: Cgl1487 COG1881 # Protein_GI_number: 19552737 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Corynebacterium glutamicum # 15 185 6 176 177 252 71.0 3e-67 MTKNTSDSVESYATDSRFPGPDPYAPLGDVPAFTVTSSDIDEGAEITERFRAPANISPQL SWSDVPEGTKSFAVTCFDPDAPTGSGFWHWAAFNIPADVRELPTGAGSAEDLGHEGVISL RGDSGQRVYYGPQPPAGHAPHRYLFAVHAVDVDRLDIDPDATPTVLGFNLFFHTLGRAIT WGWYEAH Prediction of potential genes in microbial genomes Time: Sun Jul 3 03:55:44 2011 Seq name: gi|227860916|gb|ACLH01000004.1| Corynebacterium aurimucosum ATCC 700975 contig00004, whole genome shotgun sequence Length of sequence - 20510 bp Number of predicted genes - 22, with homology - 20 Number of transcription units - 15, operones - 6 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 676 686 ## COG0586 Uncharacterized membrane-associated protein 2 2 Op 1 . + CDS 1002 - 1742 462 ## COG0398 Uncharacterized conserved protein 3 2 Op 2 . + CDS 1780 - 2352 367 ## cauri_1242 hypothetical protein 4 3 Tu 1 . - CDS 2349 - 3197 573 ## cauri_1241 hypothetical protein 5 4 Tu 1 . + CDS 3231 - 3998 553 ## cauri_1240 hypothetical protein - Term 3870 - 3915 1.2 6 5 Op 1 1/0.500 - CDS 3995 - 5113 796 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 7 5 Op 2 . - CDS 5140 - 6975 1643 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Term 7714 - 7747 1.4 8 6 Tu 1 . - CDS 7822 - 7980 89 ## 9 7 Tu 1 . + CDS 7974 - 8195 63 ## + Term 8297 - 8326 -0.5 - Term 8283 - 8312 -0.5 10 8 Tu 1 . - CDS 8325 - 8801 307 ## cauri_1237 hypothetical protein + Prom 8981 - 9040 2.1 11 9 Op 1 3/0.000 + CDS 9169 - 11985 4516 ## COG1048 Aconitase A + Term 12041 - 12095 13.2 12 9 Op 2 . + CDS 12156 - 12728 508 ## COG1309 Transcriptional regulator 13 9 Op 3 . + CDS 12777 - 13568 149 ## cauri_1234 hypothetical protein 14 10 Op 1 . + CDS 13671 - 14453 345 ## cauri_1233 hypothetical protein 15 10 Op 2 . + CDS 14506 - 15252 365 ## cauri_1232 hypothetical protein - Term 15203 - 15237 2.0 16 11 Tu 1 . - CDS 15249 - 15938 682 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 17 12 Op 1 9/0.000 + CDS 16018 - 16287 469 ## COG3830 ACT domain-containing protein 18 12 Op 2 . + CDS 16303 - 17667 1895 ## COG2848 Uncharacterized conserved protein + Term 17706 - 17736 2.7 19 13 Op 1 . + CDS 17739 - 18428 422 ## cauri_1228 HTH-type transcriptional regulator 20 13 Op 2 . + CDS 18511 - 19005 81 ## gi|262182460|ref|ZP_06041881.1| hypothetical protein CaurA7_00569 21 14 Tu 1 . - CDS 18984 - 19739 572 ## cauri_1227 hypothetical protein - Prom 19847 - 19906 2.1 22 15 Tu 1 . + CDS 20133 - 20291 126 ## gi|262182463|ref|ZP_06041884.1| hypothetical protein CaurA7_00584 + Term 20366 - 20412 8.0 Predicted protein(s) >gi|227860916|gb|ACLH01000004.1| GENE 1 1 - 676 686 225 aa, chain - ## HITS:1 COG:Cgl2389 KEGG:ns NR:ns ## COG: Cgl2389 COG0586 # Protein_GI_number: 19553639 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Corynebacterium glutamicum # 9 220 17 234 249 159 40.0 5e-39 MNFLHNVTSYMDAATLLEAFGPWVIGGIALVVFIESGVLFPFLPGDSLLVTAAILRDELH VSLWLLITVGMVAAIAGDQVGYWIGHRFGRGLFKQDARLLKLEYLITAENFFRKHGPLAL VLGRFVPIVRTFIPVAAGTAEMPYKKFIGWNVSGAVAWVLSMNLVGVFLGNIPGIADSIE KIMLLIIALSVAPIVIKGVHSYVVSKKKSTVVVEKEPTAEATTEA >gi|227860916|gb|ACLH01000004.1| GENE 2 1002 - 1742 462 246 aa, chain + ## HITS:1 COG:Cgl1494 KEGG:ns NR:ns ## COG: Cgl1494 COG0398 # Protein_GI_number: 19552744 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 237 26 257 258 201 48.0 1e-51 MKSGWVHSVGDFCTSLARSAWQSCRRWTWKRWAAVILTGTALVFLAVLVDVPSLAALRSW SQHLGPWFLIAFTGAYIVFTQFPMPRTVWTLAAGLLFGPWLGLVISLVALTISATVSLLI VRSLLGEWIRPYLTHPAVYAINARLDRRGWLAVASLRMVAGVPFSLLNYVAALTPISVLQ FSIATFIGSIPTTAIGVFFGDALTGKTSPYTIIGFVLAAALGIGGLILDTRLPLEPGMQR PVKRKG >gi|227860916|gb|ACLH01000004.1| GENE 3 1780 - 2352 367 190 aa, chain + ## HITS:1 COG:no KEGG:cauri_1242 NR:ns ## KEGG: cauri_1242 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 190 1 190 190 293 100.0 2e-78 MLAVHARYRGRSVRRADLVQRSAAALSTLEGIGEFEVLGVEDICAVAYSSSAVCDVVMAL LADGDWAIGIGVVPGEGAGDAETRAVATAAVKGSARAGHVYAKVDRRGRAQEAQDIAAAF ALLGFVLNKRTMEGREATSLVRGGLNQNEAAEELGISKQAMSQRLQAAGWAAETAGCQLA VNLIDRANSN >gi|227860916|gb|ACLH01000004.1| GENE 4 2349 - 3197 573 282 aa, chain - ## HITS:1 COG:no KEGG:cauri_1241 NR:ns ## KEGG: cauri_1241 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 282 1 282 282 550 100.0 1e-155 MSLNSRDPYGGDIFAGHARNKKTEYPEVPAEPGIVVEVRGDDFVGAVMGVDKTAWGPVVR LEDRHGTERVFKLVKGGFLLEGQPVTLTRYVEKQAPRKSNSGSRRVENLEAKVAAPSRIW VEGIHDAAVVEKVWGHDLRVEGVVVEYLEGLDNLEERLVEFQPGPGRRVGVLADHLVEGS KETRLTQTVGEHVLVTGHPFIDIWAAVKPERLGLRAWPEVPYGEDWKTGICRRTGWSDPK EGWSRVYNAVNSFRDLDSTLIGAVERLVDFVTTPELRKEDLL >gi|227860916|gb|ACLH01000004.1| GENE 5 3231 - 3998 553 255 aa, chain + ## HITS:1 COG:no KEGG:cauri_1240 NR:ns ## KEGG: cauri_1240 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 255 1 255 255 474 100.0 1e-132 MDMRAEVWSPVQNVAVWLGAWLWGHESTDNFLDALRELGGEHQGANGEPFLDVMSLLRRE TISIIEGGDREPLLRLILSGPGEAPALPAGSESARAAAKNPAGAIVVRTNDRDRHIVLVP SYSNRATQWMVIEETAALPSPAWLSPGEADALLSAATNESAALIEALGYRSDALPNPRLT VGTLSDFYDTPGLPTAVPGRAAKLFARADRVAAIIETVTDRIQDHSLDPQLLRLWHHIRQ ARMAGVAYALTDFAR >gi|227860916|gb|ACLH01000004.1| GENE 6 3995 - 5113 796 372 aa, chain - ## HITS:1 COG:Cgl1500 KEGG:ns NR:ns ## COG: Cgl1500 COG0276 # Protein_GI_number: 19552750 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Corynebacterium glutamicum # 21 363 8 348 370 432 61.0 1e-121 MTDTLRTAQGNALSTDSVPSSFDALLVLSFGGPEANEEVVPFLENVTRGRGIPRERLVEV GEHYFHFGGKSPLNELNREIIDNVAAELKARGHNLPVYFGNRNWHPFGTEAVEKMAADGV RNVAIFATSAWGGYSACRQYNEDIVALRKYVEDKNLPEMTFTKLRQFFDHPKFVEEMAAA VRDAYAQVPEEKLASTRMLFTAHSVPTAHDAVGGAEGDKHIYSRQVAEASRLVAEAAGVK DYDLVWQSRSGNPATPWLEPDIVDHTTVIHQEDGVDSVVVCPIGFISDHMEVIWDLDSEL KQAAEEMGVSVYRTRTAGPTTRFASLIVDLIDELEQGTEPDSLGDVTVQGCTVNGAPCAE GCCDIWSLHKQH >gi|227860916|gb|ACLH01000004.1| GENE 7 5140 - 6975 1643 611 aa, chain - ## HITS:1 COG:Cgl1501 KEGG:ns NR:ns ## COG: Cgl1501 COG0791 # Protein_GI_number: 19552751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Corynebacterium glutamicum # 472 611 465 604 604 191 77.0 4e-48 MATTSSFGFRRFKAAFAAIATTAALSTASSLTPAVAEEPEQLNIESLLSSDSPSIADLAG AIAQIEERIAQAEAEIGIQRETVNRALVDLNDARTKAAQARQGTTTARQELDDAQADVAD AQAKLDEVSRSAYRRANTSDAVTHAAGKDARSDMLERQSYLRLQSEKQQAVVSDLEKERT EKANKESQLRKTQRLAEERADKAADAESAAREQLSESEASIEESAAEREDLLSQLSSLHK ALNQAKGVDEDETASLETRYNVNDEALSMAEGFNAQDTTTVPADDSLEPTPEADSVPTAG PSASEAKNPTLQSQRSAPSVSAEDMDALSSAASTVANDPNVQELSSTSTASSAEEGATSG GSGSSFDPSGIDAETVALGIGAVGTVASLVAASQPGHNNSLSQDEIDALVEGSSKLFALQ GEGASTSEASDSASAASDEDTLESEVSGVLDPLDTTDSVTDKASESLGDASREAKIETLI ERATSQVGVPYAWGGGDANGPTQGIRDGGVADSHGDYNKVGFDCSGLVLYAFAGVGISLP HYTGYQYQKGTKIAPSEMERGDLIFYGPNGNQHVAIYLGDGTMVEAPQSGQNVSITPVRQ GGMAPYAVRLI >gi|227860916|gb|ACLH01000004.1| GENE 8 7822 - 7980 89 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLQVRCACNAVWSGVAYVKDGESVREGVSVTYGSRIDSRVDYCSIRSWTKP >gi|227860916|gb|ACLH01000004.1| GENE 9 7974 - 8195 63 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLLPRCDCDIAHCTLGLCPPHLSGTSPFVMSRNLSRGVSFGPRIARPPAEGSTLQWGGK MSAPPLTQLSWRT >gi|227860916|gb|ACLH01000004.1| GENE 10 8325 - 8801 307 158 aa, chain - ## HITS:1 COG:no KEGG:cauri_1237 NR:ns ## KEGG: cauri_1237 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 158 1 158 158 279 100.0 3e-74 MIPAGVDVDDIADQLSADGIAFSNPELALDDGLQTHIADSLQPNHGIAVVDVFPEKIPDL RDLATTLQEQTGLDTVILQAPMKVSAVSNSYDRATLEAAEDSLPAGLDQVTLLNDFYAVG DQFSVPWLLILTVAFGVAAVAGWASFRAATKKVEPAVH >gi|227860916|gb|ACLH01000004.1| GENE 11 9169 - 11985 4516 938 aa, chain + ## HITS:1 COG:Cgl1503 KEGG:ns NR:ns ## COG: Cgl1503 COG1048 # Protein_GI_number: 19552753 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Corynebacterium glutamicum # 1 938 5 941 943 1595 84.0 0 MTESLNSFGAKKTLEVNGKSYDYFDINAVEGLEKLPYSLKVLAENQLRYEDGKNVTKDHI NALANWDPSAEPDTEIQFTPARVLMQDFTGVPCVVDLATMREAISALGGKPDQVNPLNPA EMVIDHSVIVEAFGSTEALEKNVEIEYERNQERYQFLRWGAENFSNFRVVPPGTGIVHQV NIEYLSRVVFDNDGVAYPDTCIGTDSHTTMENGLGILGWGVGGIEAEAAMLGQPVSMLIP RVVGFKLTGEIPTGVTATDVVLTITEMLRQHGVVQKFVEFYGNGVKSVPLANRATIGNMS PEFGSTAAIFPIDEETIKYLELTGRPQEQIDRVEAYAKAQGMWLEQDAPEAEYSEYLELD LSTVKPSIAGPKRPQDRILLSEAKEQFRKDLPTYASGEVVADESTIEAKRMTAEGGDENS LVDVTGGLNKSRAGEGESAAKGGSGRQSNPVTVTSPNGGEYTLDHGMVAIASITSCTNTS NPSVMVGAGLIARKAAEKGLKSKPWVKTICAPGSQVVDGYFQRADLWKDLEALGFYLSGF GCTTCIGNSGPLPEEVSNAINEHDLAATAVLSGNRNFEGRISPDVKMNYLASPIMVIAYA IAGTMDFDFETQPLGQDQDGNDVFLKDIWPSPQEIEDTIQQAISRELYEADYADVFKGDD AWRSLDVPEGETFKWNEDSTYIRKAPYFDGMPTEPEPVQDIKGARVLAKLGDSVTTDHIS PASSIKPGTPAAQYLDANGVERQDYNSLGSRRGNHEVMMRGTFANIRLQNQLVDVAGGYT RDFTQEGAPQAFIFDACENYKAANIPLVVLAGKEYGTGSSRDWAAKGTNLLGVKAVITES FERIHRSNLIGMGVIPLQFPEGESHESLGLDGTETFDIEGIEALNEGGIPKTVHVTATKE SGETVEFDAKVRIDTPGEADYYRHGGILQFVLRQMVKA >gi|227860916|gb|ACLH01000004.1| GENE 12 12156 - 12728 508 190 aa, chain + ## HITS:1 COG:Cgl1504 KEGG:ns NR:ns ## COG: Cgl1504 COG1309 # Protein_GI_number: 19552754 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 184 1 185 188 220 63.0 2e-57 MPIMSDSELHRRRNDILVGARKCFAEHGYDGATVRRLEEATGKSRGAIFHHFGDKESLFL ALAREDAAREAEVVANNGLVEVMSEMLRHPERHDWLATRLAVTSMLRTDPSFAARWHEEQ EVLDKAVRARLESNAEKGRLRDDVSIDTLVTYLETFMDGFINRLALGDTKNLEQVLDLVE QSIRGSRAVH >gi|227860916|gb|ACLH01000004.1| GENE 13 12777 - 13568 149 263 aa, chain + ## HITS:1 COG:no KEGG:cauri_1234 NR:ns ## KEGG: cauri_1234 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 263 9 271 271 480 100.0 1e-134 MDHTPLQLPRTQCGISLNATPQLAPKEQRAHDAQPNPRIDNSGLREVIEEAGPLPGRLKP GDVATWVFTTIVVLFACSMVFAFIDDFLGPARHVISRFQLISFIPIFPLLIFLILLLIGV RRVATKVTRARRLRTAWRNGWVEYRPALIGELVYLRSKTEGPEDRERTYFYYSAPLLLLQ PDGTLAKAMSGEFRAANPNWLRSRGAALAEGSRIATVDTASSNGWTVAAYRTDGTSLEAE LSNGLTGRQVDAVLQFAEQRWVR >gi|227860916|gb|ACLH01000004.1| GENE 14 13671 - 14453 345 260 aa, chain + ## HITS:1 COG:no KEGG:cauri_1233 NR:ns ## KEGG: cauri_1233 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 260 1 260 260 531 100.0 1e-149 MTQSSIQLPRSPLKFDAASAGSLAPKELKEHDQQPNPNVDRSGIREAINSVGRPIGHTNL GAIIFGFIFISMGVMSLFFTVFHVLFLFVLFPGADGTNGGIPIASIINGLAALVFIFVGV MLVRGRWGRRTRLRTAWANGWVEYRPALIGELVYKRRVDYNDNTDYYYTAPILILQPDGS LTKAMTAEFVAPNPNWLKLRGRLLADGPLVATVDFNHNNGWSVVGYRADSDNPRLELQHG LRKKNIEAALSFAEQNWVKN >gi|227860916|gb|ACLH01000004.1| GENE 15 14506 - 15252 365 248 aa, chain + ## HITS:1 COG:no KEGG:cauri_1232 NR:ns ## KEGG: cauri_1232 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 248 1 248 248 414 100.0 1e-114 MSQQAIAPFDFPDHEYSERLIPRSSQKVSSPNPSFTTAAVARAIAAAGPLPGGSIAGWKS LRTNLIVAVVLLAIALSAFIGEDMSISSGWQGLAVAVFVLVLVVAAGRQIRSIRSSTWGA RRLRTAAENGWIEYYPALLSEIWQTDRHVPHADPTEYYYKAKVRLFLPDGTVQEIISDEF ESHTSPRAFREQGIAVVRFQSQATFERTTGWYIAAHLATKPFRQASLHNGLTREQVSAGL SAAASPAS >gi|227860916|gb|ACLH01000004.1| GENE 16 15249 - 15938 682 229 aa, chain - ## HITS:1 COG:Cgl1506 KEGG:ns NR:ns ## COG: Cgl1506 COG0702 # Protein_GI_number: 19552756 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Corynebacterium glutamicum # 7 229 5 223 224 208 53.0 8e-54 MTDTTTTARKKVLYIGGHGKVGLLAAPKLVDANLTVHSLIRNPDQVSDIEALGATAVVRD LTELSVDDWAELLADYDVVVWGAGNGGRAGAEVTWAVDRDAALASIAGLEKLAEEGKHTP AYVMISYIGATENTTDPSDESWYAYVESKKAVDNKLNLTDLNYLILGPAALTEKPSRGIT VLDNGAERTSDMTTSRELVAEVVAEVARRDSFPASPLEFIDGDGDVKNI >gi|227860916|gb|ACLH01000004.1| GENE 17 16018 - 16287 469 89 aa, chain + ## HITS:1 COG:Cgl1508 KEGG:ns NR:ns ## COG: Cgl1508 COG3830 # Protein_GI_number: 19552758 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Corynebacterium glutamicum # 1 89 1 89 89 86 64.0 9e-18 MIAIMTVTGVDNTGIISAVSTALAELNVNIVDVSQTLMSEYFTMILRVEFDENEVSIQQL QERMNTVGESIKQSIRVQSEALFTAMNEI >gi|227860916|gb|ACLH01000004.1| GENE 18 16303 - 17667 1895 454 aa, chain + ## HITS:1 COG:Cgl1509 KEGG:ns NR:ns ## COG: Cgl1509 COG2848 # Protein_GI_number: 19552759 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 454 14 462 462 691 84.0 0 MLNRFNTASILDTIEMIEKYRLDIRTVTMGISLLGCTRPTMEATAEAVYDLVTSRAAHLV EVCEGIEAELGIPIVNKRISVTPIALIVAGVEGNPVDVARALDRAAAATGVDFVGGYSAL VEKGATTAEKALIRSIPEALAETNLVCSSVNIASSRAGINMNAAAQMGRIIKEAAELTKD RSAIGCAKLVIFSNSVGDNPFMAGAFHGIEEPDCVVSVGVSGPGVVDRALGSLEGATLNE VAEEVKKAAFKVTRAGQLVGEMASARLGVPFGIIDLSLAPTAELGDSVAHILEHMGLDQV GTHGTTAALALLNDAVKKGGMMACSRVGGLSGSFIPVSEDKGMIDAVRTGAISIDKLEAM TSICSVGLDMIAIPGDTSAETIAGMIADEAAIGVMNHKTTAVRVIPAPGTQAGDEVNFGG LLGYAPVIPVNQVGNSTFINRGGFIPAPVHGFRN >gi|227860916|gb|ACLH01000004.1| GENE 19 17739 - 18428 422 229 aa, chain + ## HITS:1 COG:no KEGG:cauri_1228 NR:ns ## KEGG: cauri_1228 # Name: not_defined # Def: HTH-type transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 229 1 229 229 408 100.0 1e-112 MKISDVAAVAGCSVRSVRHLHEKGAVPEPARTSGNYRDYSVSDLASVLRARALIDAGVPI ADVTSPDALERSFIMLDERIARAQQQRERLRALSQAPKGTPEDIRDSLRQVIGDPAMLLL ELDSWDLMALTGVATSATWEQLRQNLADDDCLAALREGEALWRELGSLSPQDRGVASIVD KLQSILPRGLMRGIYPTLRPGNAPLTVADTPTKGAQSVALEALVGGLRG >gi|227860916|gb|ACLH01000004.1| GENE 20 18511 - 19005 81 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262182460|ref|ZP_06041881.1| ## NR: gi|262182460|ref|ZP_06041881.1| hypothetical protein CaurA7_00569 [Corynebacterium aurimucosum ATCC 700975] # 1 164 31 194 194 271 100.0 1e-71 MRGQTLIPTGAVALPHPPGRLQMLGFITAVLVVEMVVVHLLLPAGVLRIAALLLSLWAVV FVWGLIAAERIRPSYVTNELTVLRRGNTVFVEVPMALVRSKRADRTFESAIVIREGELTV GGPAGTDTLLLLSEPVQASPDRYPWQRALPTEVTKVRFYGTTSR >gi|227860916|gb|ACLH01000004.1| GENE 21 18984 - 19739 572 251 aa, chain - ## HITS:1 COG:no KEGG:cauri_1227 NR:ns ## KEGG: cauri_1227 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 251 15 265 265 499 100.0 1e-140 MSTAATLDSVIEPLLTGLVSKRPEVRVDWAYTELKEGIESGQWDSHLGQIRERLTGYLRT DKVWTKALSAQLLNVLAEAGHFHYEDYLTFRAWYVTEEDTRGIVKDIGPIMAVGYGADYV ETCVRKGLIPPVEAAAIISCRLRAPGGVWHDDEGVRLARAACTTIAKSTSPHILEIWIER LSDTVLAEGVRNGNRAVVENFTHFLKTTGNLIRSEPEKWGIDDERAQLTLPLIAELEEQL RNASDYREVVP >gi|227860916|gb|ACLH01000004.1| GENE 22 20133 - 20291 126 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262182463|ref|ZP_06041884.1| ## NR: gi|262182463|ref|ZP_06041884.1| hypothetical protein CaurA7_00584 [Corynebacterium aurimucosum ATCC 700975] # 1 52 34 85 85 106 100.0 6e-22 MGRVELRNVFGCDCGVESAVFKPQTNVETEAAHAYNAVFAYAELVWDTPMVC Prediction of potential genes in microbial genomes Time: Sun Jul 3 03:57:24 2011 Seq name: gi|227860915|gb|ACLH01000005.1| Corynebacterium aurimucosum ATCC 700975 contig00005, whole genome shotgun sequence Length of sequence - 111892 bp Number of predicted genes - 103, with homology - 100 Number of transcription units - 37, operones - 19 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 776 248 ## COG2801 Transposase and inactivated derivatives - Prom 862 - 921 1.5 - Term 846 - 881 3.1 2 2 Tu 1 . - CDS 925 - 2556 2006 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 3 3 Tu 1 . + CDS 2717 - 4717 1413 ## COG1299 Phosphotransferase system, fructose-specific IIC component 4 4 Op 1 4/0.000 - CDS 4858 - 5286 646 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 5 4 Op 2 19/0.000 - CDS 5287 - 5736 484 ## COG0822 NifU homolog involved in Fe-S cluster formation 6 4 Op 3 4/0.000 - CDS 5733 - 6980 1151 ## COG0520 Selenocysteine lyase 7 4 Op 4 41/0.000 - CDS 7061 - 7819 1128 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 8 4 Op 5 12/0.000 - CDS 7847 - 9037 1279 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 9 4 Op 6 3/0.111 - CDS 9038 - 10483 2012 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 10 4 Op 7 . - CDS 10506 - 11216 497 ## COG2345 Predicted transcriptional regulator + Prom 11174 - 11233 1.9 11 5 Op 1 . + CDS 11355 - 13121 1392 ## cauri_1214 alpha mannopyranosyltransferase 12 5 Op 2 45/0.000 + CDS 13128 - 14042 368 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 13 5 Op 3 3/0.111 + CDS 14103 - 14864 648 ## COG0842 ABC-type multidrug transport system, permease component 14 5 Op 4 . + CDS 14947 - 15960 974 ## COG1612 Uncharacterized protein required for cytochrome oxidase assembly + Term 16006 - 16055 14.2 15 6 Tu 1 . + CDS 16087 - 17055 933 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Term 17040 - 17080 12.2 16 7 Tu 1 . - CDS 17127 - 18071 840 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) - Prom 18272 - 18331 2.8 + Prom 18232 - 18291 2.1 17 8 Op 1 13/0.000 + CDS 18361 - 20472 2646 ## COG0021 Transketolase 18 8 Op 2 . + CDS 20517 - 21605 1388 ## COG0176 Transaldolase 19 9 Tu 1 . - CDS 21602 - 21817 108 ## + Prom 21641 - 21700 1.8 20 10 Op 1 5/0.000 + CDS 21735 - 23267 1559 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 21 10 Op 2 4/0.000 + CDS 23289 - 24221 859 ## COG3429 Glucose-6-P dehydrogenase subunit 22 10 Op 3 . + CDS 24277 - 25038 694 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 25081 - 25130 9.5 - Term 25067 - 25118 15.1 23 11 Op 1 9/0.000 - CDS 25155 - 25391 407 ## COG1314 Preprotein translocase subunit SecG - Prom 25492 - 25551 3.2 - Term 25495 - 25544 13.6 24 11 Op 2 13/0.000 - CDS 25576 - 26355 1153 ## COG0149 Triosephosphate isomerase 25 11 Op 3 26/0.000 - CDS 26398 - 27615 1600 ## COG0126 3-phosphoglycerate kinase - Prom 27665 - 27724 2.4 - Term 27718 - 27759 1.3 26 11 Op 4 1/0.333 - CDS 27861 - 28868 1487 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Term 29214 - 29272 -0.5 27 12 Op 1 12/0.000 - CDS 29360 - 30349 555 ## COG1481 Uncharacterized protein conserved in bacteria 28 12 Op 2 12/0.000 - CDS 30517 - 31536 761 ## COG0391 Uncharacterized conserved protein 29 12 Op 3 5/0.000 - CDS 31595 - 32476 649 ## COG1660 Predicted P-loop-containing kinase 30 12 Op 4 . - CDS 32532 - 34586 1547 ## COG0322 Nuclease subunit of the excinuclease complex 31 12 Op 5 . - CDS 34586 - 35209 524 ## cauri_1195 hypothetical protein 32 12 Op 6 18/0.000 - CDS 35296 - 35778 494 ## COG0054 Riboflavin synthase beta-chain 33 12 Op 7 15/0.000 - CDS 35826 - 37088 1224 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 34 12 Op 8 16/0.000 - CDS 37100 - 37738 514 ## COG0307 Riboflavin synthase alpha chain 35 12 Op 9 4/0.000 - CDS 37819 - 38748 459 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 36 12 Op 10 3/0.111 - CDS 38844 - 39521 878 ## COG0036 Pentose-5-phosphate-3-epimerase 37 12 Op 11 20/0.000 - CDS 39550 - 41145 1017 ## COG0144 tRNA and rRNA cytosine-C5-methylases 38 12 Op 12 26/0.000 - CDS 41142 - 42140 693 ## COG0223 Methionyl-tRNA formyltransferase 39 12 Op 13 4/0.000 - CDS 42229 - 42738 434 ## COG0242 N-formylmethionyl-tRNA deformylase - Term 42774 - 42820 4.6 40 12 Op 14 2/0.222 - CDS 42834 - 44876 749 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 41 12 Op 15 4/0.000 - CDS 44888 - 46111 1340 ## COG0192 S-adenosylmethionine synthetase 42 12 Op 16 10/0.000 - CDS 46227 - 47522 704 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Term 47535 - 47590 18.3 43 13 Op 1 25/0.000 - CDS 47651 - 47953 479 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 44 13 Op 2 . - CDS 47992 - 48561 467 ## COG0194 Guanylate kinase 45 13 Op 3 . - CDS 48570 - 48890 484 ## cauri_1181 putative integration host factor - Prom 49096 - 49155 4.6 46 14 Op 1 3/0.111 - CDS 49161 - 50009 719 ## COG0284 Orotidine-5'-phosphate decarboxylase 47 14 Op 2 24/0.000 - CDS 49993 - 53334 4314 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 48 14 Op 3 7/0.000 - CDS 53365 - 54528 1659 ## COG0505 Carbamoylphosphate synthase small subunit 49 14 Op 4 15/0.000 - CDS 54635 - 56005 1591 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 50 14 Op 5 8/0.000 - CDS 56050 - 57021 982 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 51 14 Op 6 . - CDS 57022 - 57612 647 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase + Prom 57621 - 57680 2.3 52 15 Op 1 . + CDS 57774 - 59171 817 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 53 15 Op 2 . + CDS 59200 - 59715 515 ## cauri_1173 hypothetical protein 54 15 Op 3 . + CDS 59708 - 60229 565 ## cauri_1172 hypothetical protein 55 15 Op 4 . + CDS 60277 - 60750 489 ## cauri_1171 hypothetical protein 56 15 Op 5 . + CDS 60747 - 61277 520 ## cauri_1170 hypothetical protein 57 16 Op 1 . - CDS 61281 - 62147 1061 ## COG2326 Uncharacterized conserved protein 58 16 Op 2 . - CDS 62161 - 62916 696 ## COG0730 Predicted permeases 59 16 Op 3 14/0.000 - CDS 62923 - 63399 315 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 60 16 Op 4 1/0.333 - CDS 63402 - 64004 441 ## COG0742 N6-adenine-specific methylase 61 16 Op 5 4/0.000 - CDS 64047 - 66143 1590 ## COG1200 RecG-like helicase 62 16 Op 6 1/0.333 - CDS 66147 - 67565 1002 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 63 16 Op 7 4/0.000 - CDS 67576 - 68223 375 ## COG0692 Uracil DNA glycosylase 64 16 Op 8 . - CDS 68220 - 69185 534 ## COG0611 Thiamine monophosphate kinase - Prom 69281 - 69340 2.7 65 17 Tu 1 . + CDS 69278 - 70192 840 ## cauri_1161 hypothetical protein 66 18 Op 1 4/0.000 - CDS 70222 - 71292 919 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 67 18 Op 2 . - CDS 71314 - 72312 815 ## COG0240 Glycerol-3-phosphate dehydrogenase - Prom 72451 - 72510 2.0 + Prom 72280 - 72339 2.0 68 19 Tu 1 . + CDS 72461 - 73459 1138 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 69 20 Op 1 . - CDS 73509 - 74393 775 ## cauri_1157 hypothetical protein 70 20 Op 2 30/0.000 - CDS 74469 - 75059 865 ## COG0066 3-isopropylmalate dehydratase small subunit 71 20 Op 3 . - CDS 75076 - 76518 1463 ## COG0065 3-isopropylmalate dehydratase large subunit - Prom 76567 - 76626 3.0 72 21 Tu 1 . + CDS 76567 - 77280 634 ## COG1414 Transcriptional regulator - Term 77273 - 77302 1.1 73 22 Tu 1 . - CDS 77333 - 78136 557 ## cauri_1153 hypothetical protein - Prom 78244 - 78303 1.7 - Term 78259 - 78293 0.2 74 23 Tu 1 . - CDS 78313 - 78579 238 ## + Prom 78589 - 78648 1.6 75 24 Tu 1 . + CDS 78708 - 79415 477 ## cauri_1151 zinc finger protein 768 + Term 79451 - 79494 13.0 - TRNA 79488 - 79563 59.5 # Glu CTC 0 0 - Term 79439 - 79482 13.0 76 25 Tu 1 . - CDS 79568 - 79786 66 ## - Prom 79867 - 79926 1.6 77 26 Tu 1 . + CDS 80274 - 80603 340 ## cauri_1150 hypothetical protein 78 27 Tu 1 . - CDS 81298 - 81933 353 ## gi|262182539|ref|ZP_06041960.1| hypothetical protein CaurA7_00964 - Prom 82177 - 82236 3.2 + Prom 81921 - 81980 3.8 79 28 Tu 1 . + CDS 82143 - 82409 283 ## cauri_1148 hypothetical protein + Term 82622 - 82657 -0.2 - TRNA 82654 - 82729 67.2 # Glu CTC 0 0 - TRNA 82786 - 82857 54.5 # Gln CTG 0 0 - Term 82953 - 83002 14.9 80 29 Tu 1 . - CDS 83032 - 84522 2001 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Prom 84603 - 84662 3.0 81 30 Op 1 . + CDS 84694 - 87063 2246 ## cauri_1146 hypothetical protein 82 30 Op 2 . + CDS 87079 - 88182 658 ## cauri_1145 putative surface-anchored protein 83 31 Op 1 . + CDS 88365 - 89681 1012 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 84 31 Op 2 . + CDS 89674 - 90573 727 ## DIP0439 hypothetical protein 85 31 Op 3 42/0.000 + CDS 90566 - 91294 252 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 86 31 Op 4 . + CDS 91291 - 92187 974 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 87 31 Op 5 . + CDS 92184 - 93527 942 ## cauri_1141 hypothetical protein 88 31 Op 6 . + CDS 93608 - 94711 987 ## COG1169 Isochorismate synthase + Term 94928 - 94966 5.1 - Term 94477 - 94514 1.5 89 32 Tu 1 . - CDS 94720 - 95538 989 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 90 33 Op 1 6/0.000 - CDS 95664 - 96281 571 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 91 33 Op 2 . - CDS 96282 - 98150 1043 ## COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains 92 33 Op 3 2/0.222 - CDS 98168 - 99187 1221 ## COG0473 Isocitrate/isopropylmalate dehydrogenase - Prom 99218 - 99277 2.3 - Term 99248 - 99295 15.5 93 34 Op 1 . - CDS 99323 - 100909 1793 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 94 34 Op 2 . - CDS 100954 - 101829 493 ## cauri_1134 putative secreted protein 95 34 Op 3 . - CDS 101867 - 103660 1549 ## COG3472 Uncharacterized conserved protein - Term 103709 - 103759 16.0 96 35 Op 1 15/0.000 - CDS 103773 - 104786 1637 ## COG0059 Ketol-acid reductoisomerase 97 35 Op 2 32/0.000 - CDS 104898 - 105413 622 ## COG0440 Acetolactate synthase, small (regulatory) subunit 98 35 Op 3 . - CDS 105419 - 107239 1895 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 107420 - 107479 1.6 + Prom 107377 - 107436 1.7 99 36 Op 1 . + CDS 107555 - 108088 573 ## cauri_1129 hypothetical protein 100 36 Op 2 . + CDS 108091 - 109944 2271 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 101 36 Op 3 . + CDS 109956 - 111224 1391 ## cauri_1127 hypothetical protein + Term 111429 - 111480 1.5 - Term 111184 - 111228 -0.1 102 37 Op 1 . - CDS 111335 - 111649 436 ## COG1846 Transcriptional regulators 103 37 Op 2 . - CDS 111646 - 111888 151 ## gi|262182564|ref|ZP_06041985.1| hypothetical protein CaurA7_01089 Predicted protein(s) >gi|227860915|gb|ACLH01000005.1| GENE 1 2 - 776 248 258 aa, chain - ## HITS:1 COG:Cgl0698 KEGG:ns NR:ns ## COG: Cgl0698 COG2801 # Protein_GI_number: 19551948 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 3 257 5 263 481 214 45.0 1e-55 MAIPLHKRRKVADFDPVRDGKTVTQFCKELGISRQTYHNIKHRIAQKGRAGIVPDSTAPK NPIKKFDEADKIAVVHARQQLMEQGLDYGPWSIYYFLFDTVGPDSTPSRSTIASWLHELG FVDANARKRPRSSYKRFARDLVGELWQIDGLVYRLFDHAHTHVTIYQIIDDASRFDVGTT AFALPENGTDARAVLAAAFAAYGKPQEILSDNGDAFATYHRGFLSATETWLASQGVLAIA GFAPTTQGKDERSHRTLT >gi|227860915|gb|ACLH01000005.1| GENE 2 925 - 2556 2006 543 aa, chain - ## HITS:1 COG:Cgl1517 KEGG:ns NR:ns ## COG: Cgl1517 COG0488 # Protein_GI_number: 19552767 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 1 543 1 543 543 863 84.0 0 MIVTNDFEVRVGARTLLDAPGQHLRVQPGDRIGLVGRNGAGKTTTMRILAGETEPYGGSV TRSGPIGYLPQDSREGNIEQTARERVLSARGLDEIKRRMAKQQELMETATDDKFRDKAIR KFSRLEEEYHTLGGYEADSECAQICDNLGLPQRVLDQQLKTLSGGQRRRVELAQILFAAS AGSGKSQTTLLLDEPTNHLDADSITWLRGFLSKHEGGLVMISHDVDLLEAVCNKVWFLDA VRAEADVYNMGFKKYLDARATDEARRRRERANAEKKAAALHKQAAKLGAKATKAAAAKQM LHRAERMMNELDDVRVADKVAHIKFPEPAPCGKTPMNAKGLTKMYGSLEVFAGVDLAIDK GSRVVVLGYNGAGKTTLLKLLAGVERTDGEGGIVSGHGLRIGYFAQEHDNIDPDKTVWEN TIEACPDAGQQDLRGLLGAFMFSGDKLEQPAGTLSGGEKTRLSLATLVSSRANVLLLDEP TNNLDPQSREQVLDALGTYTGAVVLVTHDPGAVKALNPERVIIMPDGDEDLWNDEYMEIV ELA >gi|227860915|gb|ACLH01000005.1| GENE 3 2717 - 4717 1413 666 aa, chain + ## HITS:1 COG:SA2434_2 KEGG:ns NR:ns ## COG: SA2434_2 COG1299 # Protein_GI_number: 15928227 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Staphylococcus aureus N315 # 142 476 1 335 371 355 57.0 2e-97 MSTSDTSKSPLILAITACPTGIAHTYMAAENLEAAAAELGYRIKIETHGSIGVEGTFSSQ DIEEADAIVIGADTVIAKDRFRGKRLAATGVDEAIKHPKELLTRALSAAKWEEKTSSEST PGNQREETSGSASGIRAVGETLYKALMNGVSHMIPFVVTGGLLIAVALSIGGTPTPEGLA IPEDSFWNTLNELGGLAFSLMVPILSGYIAVGIADRPGLAPGLITGLIATTGSLYGSEAG AGFLGGIVTGVLSGYVALGIKKIPVNRYIAPIWPIIVIPIFTTLIVGLIFIYLVGAPVAG AFEAMTEYLAEMEGSSVIVLGLVIGAMIAFDMGGPFNKTAFLFGGGMIAAGNAAPMGMAA TAIAVPPLAVGVATLFRRSWFNKAEKDAGIAAFFMGFFGITEGAIPLAAARPLQVIPANV IGGAVAGALAGAFGVADHVMHGGPIVAVLGAVDNVVGFFIALLIGVVVCASVMLLLIGLT HNRKARSKDESSGEQGAAGIAKEDASQSTIQEEPLLSVDTVSLDQDLGTNRKETIESLVQ LVSPRLSDPFVVITTALEREAKHSTGVGHGVAIPHARSAGVTVPTLAFARLSEGITWAEG EEPTTLVFLIAVPEDAGKQHLKLLSKLARAIMKDDFRTRLQSATSKQDAVDIISSALDPA TSPASS >gi|227860915|gb|ACLH01000005.1| GENE 4 4858 - 5286 646 142 aa, chain - ## HITS:1 COG:Cgl1522 KEGG:ns NR:ns ## COG: Cgl1522 COG2151 # Protein_GI_number: 19552772 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Corynebacterium glutamicum # 1 142 1 137 137 158 61.0 2e-39 MADNTETTGGSTDPYQDQNASFDGAAVKPEQTEEQIAKTFDITEYLRDVIDPELGINIVD LGLVYDVWLDDIDGKNTCVINMTLTSPACPLTDVIGEQIEDVIVGNKLAEAVQLNWVWMP PWGPNMITEEGREMLQALGFAV >gi|227860915|gb|ACLH01000005.1| GENE 5 5287 - 5736 484 149 aa, chain - ## HITS:1 COG:Cgl1523 KEGG:ns NR:ns ## COG: Cgl1523 COG0822 # Protein_GI_number: 19552773 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Corynebacterium glutamicum # 1 137 1 138 149 211 75.0 3e-55 MNLDSMYQDVILDHYKNPKFSGLREGQAEVHHVNPSCGDEITLRVKLSADGTTVEDVSYD AEGCSISQASTSVMAEEIVGIPLEEANAKLEEFDRMVTSRGEVEGDDEIIGDGVAFAGVA KFPARVKCALLGWKAFQAATVEALNELEK >gi|227860915|gb|ACLH01000005.1| GENE 6 5733 - 6980 1151 415 aa, chain - ## HITS:1 COG:Cgl1524 KEGG:ns NR:ns ## COG: Cgl1524 COG0520 # Protein_GI_number: 19552774 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Corynebacterium glutamicum # 4 413 11 420 421 622 75.0 1e-178 MPELDVNAIREQFPILSRTVRDGKPLVYLDSGATSQRPLPVWKAEEEFVLGTNAPVHRGS YQLAEEADDAYESARQAIAAFVGADRDEISFTKNATEALNEVAYVLSDERAGELFVGEGD TVVVTELEHHANLVPWQELCQRTGATLKWYSMTEDGRIDLDSLELDDSVKVVAFTHQSNV TGAVAPVAELVRRARAVGAMVVLDACQSVPHMPVDFHELDVDFAAFSGHKMCGPTGVGVL YGKQELLAQLPPFLTGGSMIEVVKMEGSTFAEPPTRFEAGTQMTSQVVGLGAAVKFLSEV GMDAIHAHEQNLTALALEKLAEIPGVRIIGPENTEDRGGAVSFIVDGIHPHDLGQVLDSH GVSIRTGHHCAWPLHRACQANSTARASFYLYNTEDEVDALIEAVRAARTFFGVSE >gi|227860915|gb|ACLH01000005.1| GENE 7 7061 - 7819 1128 252 aa, chain - ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 1 252 1 252 252 416 80.0 1e-116 MSTLEIKNLHAQVLPHEEDGEPTPILKGVNLTINSGETHAVMGPNGSGKSTLSYVIAGHP KYEVTEGEVLLDGENILEMEVDERARAGLFLAMQYPTEVPGVKMSQFMRSAVTAIRGEAP KLREWNKELTEAREKLSIDKSFAHRSVNEGFSGGEKKRHEVMQLDILKPKFAIMDETDSG LDVDALRVVSDGINSYQEETKGGILLITHYKRILNYVIPDFVHVFADGQIIKTGGAELAD QLEADGYEQFLK >gi|227860915|gb|ACLH01000005.1| GENE 8 7847 - 9037 1279 396 aa, chain - ## HITS:1 COG:Cgl1526 KEGG:ns NR:ns ## COG: Cgl1526 COG0719 # Protein_GI_number: 19552776 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 13 392 15 388 392 498 66.0 1e-140 MVASNEFNPADVTKGDQFTSFNVEDFPVPHGRDEVWRFIALRNLRGLHNGEFAPATAQKI NVVAPEGVTSETVAPDDERLGTAGAPADRVAAQAWSSMPEAQVVTVDAEAQLEKPVEITI TGAGEGVTSFGATSIHVGHHAEATIVLKYVGSGTHADNVEFVLGDGSQVTVVVDADWEND AVHLSHQIAKVGRDAVLRHNTAIFGGEIVRLAPRVVFDAPGGDAELLGVYFADAGQYFEN RLLVDHDVPNCRSRVFYKGALQGATAAQKAEAGSSSRTPEARTCWVGDVLIRKNANNTDT YETNNNLILTEGARADAIPNLEIQTGEIVGAGHAATVGRFDDLELFYLMSRGIPAAEARR LIIRGFFSEVISRIPVESLREDLESRVVDELAKINA >gi|227860915|gb|ACLH01000005.1| GENE 9 9038 - 10483 2012 481 aa, chain - ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 1 481 1 481 481 844 84.0 0 MTQAQPAPGLETKMSDDEIISSIGGYEYGWRDSDEAGQAAHRGLSEDVVRDISKKKNEPE WMLESRLKALRVFNKKPVPTWGPDLSGIDFDNIKYFVRSTEKQAQTWDDLPDDIKETYDK LGIPDAEKKRLVSGVAAQYESEVVYHKIREDLEAQGVIFVDTDTAVREYPEILQEYFGTV IPAGDNKFSALNNACWSGGSFVYVPKGVHVDIPLQAYFRINTENMGQFERTLIIVEEGAY VHYIEGCTAPIYNSDSLHTGVIEIIVKKGGRCRYTTIQNWSTNVYNLVTQRAKVEEGGTM EWVDGNIGSKVTMKYPSCWLTGEHAKGEVLSLAFAADNQVQDTGSKMVHMAPNTSSNIVS KSVARNGGRAAYRGLVQVNANATNSTANVECDALLVDNNSRSDTYPYNDIRNDHVTLGHE ATVSQVSEEQLFYLMSRGIAEEEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV G >gi|227860915|gb|ACLH01000005.1| GENE 10 10506 - 11216 497 236 aa, chain - ## HITS:1 COG:Cgl1528 KEGG:ns NR:ns ## COG: Cgl1528 COG2345 # Protein_GI_number: 19552778 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 8 229 9 228 228 231 55.0 7e-61 MTKELPRETRSTEGDTRRHVMLLLLKDGPVTASYLGERLGLSAAGIRRHLDILVEEGLTE VVHRRPSARPGQTAGRGRPAKHFRLTDQGRAQFGHAYDQLAAEALTALREAGGPEAVRHF AKARFERLVEDVTPLVEDEESVPEVARRLAEVLDAHGYAATVTSVGNGVQICQHHCPVAH VAAEHPELCEAEQEVFSALLGKHVQPLASIADGHGICTTNIPLTPVPPSAAEREEN >gi|227860915|gb|ACLH01000005.1| GENE 11 11355 - 13121 1392 588 aa, chain + ## HITS:1 COG:no KEGG:cauri_1214 NR:ns ## KEGG: cauri_1214 # Name: mptB # Def: alpha mannopyranosyltransferase # Organism: C.aurimucosum # Pathway: not_defined # 1 588 1 588 588 983 100.0 0 MNMERGYTQSGRLHRVIWGVRDELPRMGVPGSRSALLHQDFPGSTEVADHAALGDVHRRT ITQLRTLFSLRWLGTIGALLIALGGLGAGALPVVGNPYESLPFGSLMTRMLQSASALVFI GVGFMVTAWVCMAPLVGAPLRLRKNSASASTGSTPTEDPRFSHSPRVVTQSQMWRTWLGW VLPLLVTAPLFTQDIYSYLANGSIVLQGLDPYSAGPVQLLGADNDLARSVPFIWANSPSP YGPVALGLAAVVSWLTNDSIIWGVVLHRVFSLFGIIAAGWAIARLATRCRVSPEAALWLG ILNPLTILHLVGGIHNESFMLGLALVGVELGLRAVNDEHDARWRVWALFLASGVLISCAG MVKVTGFIGLGFVGMAAARRRVDKHGIPPVRAVLGAGVTQLLVLAASIAAVTVITGIDIG WIFGQGGAATIRSWLSATTSVGVGAGSLGMLLGLGDHTEAILSVTRTVGVIIAGGFMIRM LFATYRGAIHPVGGLGVSTFVLVVFFPVVQPWYILWAVLPLAAWANRRFFRMAVMIYSGL MSFIVLPRGLGLPPGTVFVIYLAALVTFLALAAAGWVALRRSGVRVLD >gi|227860915|gb|ACLH01000005.1| GENE 12 13128 - 14042 368 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 3 302 2 306 311 146 31 5e-34 MTTSALVLDNVIKTYGDVNAVNGLSFRANYGEILCLLGPNGAGKTTTIEMCEGFKKPTSG HIEVLGLDPARNPDAVRSRIGIMLQGGGSYSGIKVKEMLELSASYNENPLDPEWLLDTLG LRGLAKNSYRRLSGGQQQRLSLALAIIGRPELVFLDEPTAGMDAQSRLAVWDLIRSLRAD GVTVILTTHLMDEAEALSDHVVIIDHGRLVASGTAASLTEATDIPQLNFDTATPVDLEAL REEGISAEAIRPLHYRLTSTVSPAVIADLATGLAAQNVVLRNLHTSHRNLEEVFLDLTGR EMRS >gi|227860915|gb|ACLH01000005.1| GENE 13 14103 - 14864 648 253 aa, chain + ## HITS:1 COG:Cgl1531 KEGG:ns NR:ns ## COG: Cgl1531 COG0842 # Protein_GI_number: 19552781 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Corynebacterium glutamicum # 2 251 14 264 268 224 53.0 2e-58 MSTYAPGTFSPHPQRVGVATMARAQGAIESKLMLRHGEQQLLSIIIPLAILIGAAKLKDT TGHGVDEVFPMVLAVAATSSGFTGQAISLAFDRRYGALKRTGASGVPAWAIVVGKILGVL SMVVLQVLVLGTVAAILGLRVSVVGAAIGVLTLVLGVATFTALGLLLGGTFSSEVVLAVA NLIWFLLLGAVGWAMFSQGLGDNGVLTLVPTVAMAAGLDTALNGSFPGIELLVLVGWAAV ASFAAVRWFRFEG >gi|227860915|gb|ACLH01000005.1| GENE 14 14947 - 15960 974 337 aa, chain + ## HITS:1 COG:Cgl1532 KEGG:ns NR:ns ## COG: Cgl1532 COG1612 # Protein_GI_number: 19552782 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein required for cytochrome oxidase assembly # Organism: Corynebacterium glutamicum # 1 329 1 327 346 305 52.0 9e-83 MSTANISSPQRSTTPAAPSTGPSVKTQRIVALILLLCQGGITVSGSIVRVTGSGLGCVTW PNCHPGSLVPIQGAAPMLHQAIEFGNRLLTFVVAAAAIASIVVVHKAQRRKELKVYAWAG LAGVFVQALIGALSVVLKLSWWSVAIHFLPSMVLVWIAAMLFSRINEPDDGTPTRLFPAA VRTLAVVATIALSIVLLTGTFVTGSGTHSGDAGVGMEGRLGVDTYGMAIIHAVCMYVYLA LTLIVVFLLHRNGAPKVAKKAGWVLIACIVIQWAIGVTQFYLHIPRWTVPFHVGMSSVVT AFTALLWAHGLRRVENEDGSTANTAQNGDENVPAAQG >gi|227860915|gb|ACLH01000005.1| GENE 15 16087 - 17055 933 322 aa, chain + ## HITS:1 COG:Cgl1534 KEGG:ns NR:ns ## COG: Cgl1534 COG0604 # Protein_GI_number: 19552784 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 322 7 328 328 440 70.0 1e-123 MHAIQVTTTGGPEVLTYAEVDSPTPTKEQLLVDVSVAGVNYIDTYYREGIYNASVPFIIG LEGTGRVVHDPQGEIAPGTMVAWDHAFGSYAEQVCVPRDRVVAVPDEIPSAVAGSMLLQG MTAHYLTHGVYQLGEGASCLITAGAGGVGLILTQMAKSLGATVYSVVSTDEKEELAYGAG ADCVFRYSSGLAEQVRRHNGGRGVDVVYDGVGKATFNESLEVVRPRGTVALFGAASGPVP PMDPQLLNKHGSIFLTRPSLGAWTSQEGEFQMRAQAVVQAVIDGDLDFRISAEYPLAEAA QAHRDLQERKTTGSIVLRVRED >gi|227860915|gb|ACLH01000005.1| GENE 16 17127 - 18071 840 314 aa, chain - ## HITS:1 COG:Cgl1535 KEGG:ns NR:ns ## COG: Cgl1535 COG0109 # Protein_GI_number: 19552785 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Corynebacterium glutamicum # 1 314 14 323 323 383 65.0 1e-106 METIKAYFALTKPRIIELLLVAAIPAMLQAQRGFEAVSSNFWLIVSTIFGGWMGAAAAHT FNNVVDYEIDQKMQRTRARPLVRKTISRRNAAIFAWVMLALSVFWLGVLAHSWLAAFFVL LTNFFYVIVYTKFLKMRNSQNIVWGGLAGCMPAMVGWAVIRDNAPAGEPDRWWQAVVLFL IIFFWTPPHTWALAMKYKEDYRKAGVPMLPVVAGEVEVTRQIVWYTIGTVIVTFLIIPAA SWIYLVAAVASGAVFLWMAIRLHQGVKKGAKVKPMRLFIYSNNYLSVLFIGLSIDAVVGW EPIGRMLGWSAALF >gi|227860915|gb|ACLH01000005.1| GENE 17 18361 - 20472 2646 703 aa, chain + ## HITS:1 COG:Cgl1536 KEGG:ns NR:ns ## COG: Cgl1536 COG0021 # Protein_GI_number: 19552786 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Corynebacterium glutamicum # 1 699 1 700 700 1023 76.0 0 MSHEKLSPELQAMVQRRYPSDWSDLDTRAVDTVRVLAADAVQNCGSGHPGTAMSLAPLAY TLYQRVLNHDPADVHWAGRDRFVLSVGHSSLTQYIQLFLGGFGLEMEDLKSLRTWGSKTP GHPEVHHTDGVEITTGPLGQGLASAVGMAMAARKERGLFDASAPAGDSPFDHYVYVIASD GDLQEGVTAEASSLAGTQKLGNLIVFWDDNRISIEDDTNIAFNEDVAKRYEAYGWHVQTV ESGEDVEAIEAAAAAARAETSRPSFIRVKTVIGYPAPNKMNTGGVHGAALGEDEVAATKE VLGFDPAQSFHIDEEVLAHTRELTARGAQKHAEWQEKFDAWAAAHPEEKKLFDRLQAREL PADFATELPTWEAGESLATRKASEAAIQALAASLPEMWGGSADLAGSNNTVIKGAESFGP ESITTDAWTATPYGRNLHFGIREHAMSAIMNGIALHGNTRVYGGTFLIFSEYQYPAVRLG ALMSTDTYYVWTHDSIGLGEDGPTHQPVETLAALHAIPNLSVIRPADANETAQAWAAALE YKAAPKGLALSRQNLPVLEGTKEKAAEGVRRGAYVLVEASKVTPDVILLATGSEVQLAVE AAKQLEAEGTATRVVSAPCLEWFDEQDASYRESVLPSSVRARVSVEAGISMPWHKYTGSF GRTVSLEHFGASAPAAELFEKFGFTAEAVAEAARESLNAAQAD >gi|227860915|gb|ACLH01000005.1| GENE 18 20517 - 21605 1388 362 aa, chain + ## HITS:1 COG:Cgl1537 KEGG:ns NR:ns ## COG: Cgl1537 COG0176 # Protein_GI_number: 19552787 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Corynebacterium glutamicum # 1 361 1 359 360 491 74.0 1e-139 MTHIDDLARLGTSTWLDDLSRERLDSGNLRELLDTKSIVGVTTNPAIFAAAMSSGNSYDT DIAALKEKSATADEAVYSLAIDDVRNACDVFTEIYEKSGGRDGRVSIEVDPRISADAEAT LEQARELWAKVARPNLMIKIPATDGSLPAISDALAEGISVNVTLIFSVERYAQVIAAYKE GIKRAAAAGKEVSTIHSVASFFVSRLDTEVDKRLELTGSDEALALRGKAGVANAQRAYAL FRKEFKEGGEDLPADANPQRPLWASTGVKNPDYPATLYVSELAGPETVNTMPEKTIDAVL EQGNLHGDTLTDSAAQAEQVWSQLEAVGIDFADVFAVLEKEGVDKFVDAWEALLASLTDR LA >gi|227860915|gb|ACLH01000005.1| GENE 19 21602 - 21817 108 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPEGPAIRGRRLSFALRNGLTHALVVLTKYPFGLCELSPTAQHSDPRPVDHSCVAIFGAR VAIEQSLFAVV >gi|227860915|gb|ACLH01000005.1| GENE 20 21735 - 23267 1559 510 aa, chain + ## HITS:1 COG:Cgl1538 KEGG:ns NR:ns ## COG: Cgl1538 COG0364 # Protein_GI_number: 19552788 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Corynebacterium glutamicum # 2 510 5 514 514 844 78.0 0 MSTTSAWVNPLRNAKDKRLPRIAGPSGMVIFGVTGDLARKKLLPAIYDLANRGLLPAGFT LVGYGRRDWDKQAFCDYVREAAEAGARTTFNEHVWEHLAKGIEFVQGNFDNEGFDKLSAR LAELNASRGTGGNWAYYLSVPPEFFSDICHQLERVGMADSTDNSWRRVIIEKPFGHDQNS ARQLNEIVNAVFPESSVFRIDHYLGKETVQNILALRFANQIFEPMWNAHYIDHVQITMAE DIGLGGRAGYYDGIGAARDVIQNHLLQLLALVAMEEPSSFDPEALQAEKIKVLRATNAVH PLNKTTARGQYSAGWQGSEYVKGLREEEGFDPESTTETYAACTLEVNSRRWAGVPFYLRT GKRLGRRVTEIALVFKTAPHQPFDQGQADSLGQNAVVIRVQPDEGVTMRFGSKVPGSTME VRDVNMDFAYAEAFTEESPEAYERLILDALLDESSLFPTNEEVELSWSILDPIIEYWSNI GQPEQYRAGTWGPESADRMLRRRGHSWRRP >gi|227860915|gb|ACLH01000005.1| GENE 21 23289 - 24221 859 310 aa, chain + ## HITS:1 COG:Cgl1539 KEGG:ns NR:ns ## COG: Cgl1539 COG3429 # Protein_GI_number: 19552789 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Corynebacterium glutamicum # 1 306 1 314 319 263 48.0 3e-70 MIIPLPDTTTRKISKKLVEMQEHYTLTTGRVLTLIVMTEEGDDLDNLLTSVRDASHEHPS RVIVIASGSLEEETRLDAELRVGGEAGASEIVVMHLHGALADQAEAVVTPLLLPDTPIVA WWPTACPPAPAEVPIGALAQRRITNVAFGSGVDQYDLHVLSSGYKPGDSDMSWGAITLWR GIVASALDRHPHEPVNSVEISGAEHHAAVDFAAGWLLDALSVPVTRRISECEAGAFPITS LVFRRPTADITVTAVDAATVKVSVPGSPESLVSLAVRSEAEVLSEELRHLDSDRTYAHAL RALARVHYSV >gi|227860915|gb|ACLH01000005.1| GENE 22 24277 - 25038 694 253 aa, chain + ## HITS:1 COG:Cgl1540 KEGG:ns NR:ns ## COG: Cgl1540 COG0363 # Protein_GI_number: 19552790 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 1 253 1 235 235 248 57.0 5e-66 MVTLRRVSDIDELISSAALAFIETVAAIQAPGGGLHKDGVARVVLTGGGAGIGVLRELAR LHEAAQQQGSDYPALAVDWTRVHVFFGDERNVPVSDPDSNEGQAREALLSKVGIPEQHIH GYDLGAVSMEHAAQAYEGEIRDFAPEGFDIHLLGMGHEGHINSLFPHSEAVYEDTDHAFA VHDSPKPPSERVTLTYPAINRSQRIWFLVSGEEKAEAASHLVAGAAAEDWPAAGARGTEE TLLFVSEDAAQQL >gi|227860915|gb|ACLH01000005.1| GENE 23 25155 - 25391 407 78 aa, chain - ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 1 73 41 113 117 72 61.0 1e-13 MILALEIILVIAAILMSVFVLLHKGKGGGLSSLFGGGVQSNLSGSTVVEKNLDRYTVVMV VIWLACIVALNLLQAFSG >gi|227860915|gb|ACLH01000005.1| GENE 24 25576 - 26355 1153 259 aa, chain - ## HITS:1 COG:Cgl1548 KEGG:ns NR:ns ## COG: Cgl1548 COG0149 # Protein_GI_number: 19552798 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Corynebacterium glutamicum # 1 246 1 246 259 366 77.0 1e-101 MARTPLIAGNWKMNLDHKEAIGSLQKFAFSLPKEYYEKVDVAFMVPFTDIRTVQTLVDGD DLQFTYGAQDISKHESGAYTGEVSGKMLSALGCSWAVVGHSERRQYHGETDQLVAEKAAA ALANGISPIVCVGEPLNVREAGTHVDYVVTQTRNSLQGLSAEALSKTVIAYEPVWAIGTG KVASAEDAQEVCAAIRELVRELGGDEVAEGIRILYGGSVKVDSIAEIVGKPDVDGGLVGG ASLKGEEFAKLAANAAQGA >gi|227860915|gb|ACLH01000005.1| GENE 25 26398 - 27615 1600 405 aa, chain - ## HITS:1 COG:Cgl1549 KEGG:ns NR:ns ## COG: Cgl1549 COG0126 # Protein_GI_number: 19552799 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Corynebacterium glutamicum # 1 403 1 403 405 587 77.0 1e-167 MAFKTLDDLLAEGVSGRHVLVRSDFNVPLDDEGNITDSGRITASLPTIKALIEGGAKVIL SAHLGRPKGEVNPKYSLAPVAEALSEALDQYVALAGDVSGEDAHERANGLNDGDVLLLEN VRFDPRETSKDEAERGTFADELVALAADNGAFVSDGFGVVHRAQASVYDVAKRLPAYAGK LVQKEVETLAAVAEKPEHPYVVVLGGAKVSDKLGVIEALAGKADKVIIGGGMCYTLLAAQ GYNVQDSLLQEDQIDNCKELLERFGDKIVLPVDLVAATEFDAQAENKVVALDGIPEGWQS LDIGPESVKKFDEVIASSKTVFWNGPMGVFEMEAFSKGTAGVAQSIIDATAKNGSFTVVG GGDSAASVRLLGLDEEGFSHISTGGGASLEFLEGKELPGVKVLEA >gi|227860915|gb|ACLH01000005.1| GENE 26 27861 - 28868 1487 335 aa, chain - ## HITS:1 COG:Cgl1550 KEGG:ns NR:ns ## COG: Cgl1550 COG0057 # Protein_GI_number: 19552800 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 335 1 334 334 509 79.0 1e-144 MTIRVGINGFGRIGRNFFRAVAQGNNDLEVVAVNDLTDNATLANLLKYDSVLGRFDGEIE HDDESITVNGRKIAVSAERDPKNLNWGEHNVDIVIESTGFFTDGEAAKAHIEAGAKKVII SAPGKNVDATFVYGVNSDEYDAEKHNVISAASCTTNCLAPMAKVLHEKFGIEKGLMTTIH AYTGDQRIQDAPHRDLRRARAAAVNMVPTSTGAAKAVSLVLPELEGKLDGYAMRVPTITG SATDLTFQASRDVTAEEINAAIKEAATGEFGETLGYTEDPIVSTDIITDSHGCIFDAGMT KVSNGNFVKVLGWYDNEWGYTSQLVRTTSLVASKL >gi|227860915|gb|ACLH01000005.1| GENE 27 29360 - 30349 555 329 aa, chain - ## HITS:1 COG:Cgl1551 KEGG:ns NR:ns ## COG: Cgl1551 COG1481 # Protein_GI_number: 19552801 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 328 2 326 327 350 65.0 3e-96 MSASLTDQVKEELTAVSVPRQSARAAEVAAILRFAGELNITGDRVMYEVELESKSVATRL VTALDELFSISASTHLAGPAASSKKSRVQVRITTGAKELTRRLGLVTRSGHPVVGLPPQV ISGSVADNEAAWRGAFLAQGSLTEPGRSSALEVTCPCQEAALALVGCARRLGVVAKTKET RGADRVVVRDGDAIGALLTRMGAQETRLAWEKKRIQREAHDTSRRLDNFDDANLRRSARA AVTAAARVERAMVILGDDVPEHLADAGRLRVQHREASLEELGRLADPPMTKDAVAGRIRR LLSMADKRAKELGVPDTTKAVTEELFEES >gi|227860915|gb|ACLH01000005.1| GENE 28 30517 - 31536 761 339 aa, chain - ## HITS:1 COG:Cgl1552 KEGG:ns NR:ns ## COG: Cgl1552 COG0391 # Protein_GI_number: 19552802 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 5 316 20 331 341 352 60.0 7e-97 MTSLPTHMASLGGGHGLYQTLLAARRTGAEAISAIVTVADDGGSSGRLRREMDIIPPGDL RMALAALSSDSEEGQMWASTLQHRFQSTGAMAGHAVGNLLIAGLTEVLGDFQAALDAVGR LTHSAGRVLPAVNLPLDIEADVAGLDDDPRIMRSVRGQVAVASTVGQVRRVRIIPEKPQA NPETIAALRDADLITLGPGSWFSSVLPHVLVPEIVNAITSSDALRVVVLNLSAEPGETQG FSAERHLHVLAQHAPNLRVDKVIVDGSGLPNESERVFVQRAASVLGATAVFRDVCQADEN GNSLNKHCPDKLAQVLAELYTDYAAQRDSSAGAPGTHRS >gi|227860915|gb|ACLH01000005.1| GENE 29 31595 - 32476 649 293 aa, chain - ## HITS:1 COG:Cgl1553 KEGG:ns NR:ns ## COG: Cgl1553 COG1660 # Protein_GI_number: 19552803 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Corynebacterium glutamicum # 11 292 27 308 309 390 64.0 1e-108 MEAMTLFDSPPILITGMSGGGLTSAAKVLEDKGYYVAHNIPPKAIVDLLKLCASPESPVS KIAAVTDVRSRLFPGSLAETLDELEQLDMKPTLLFLDARDDVLIRRFDSVRRTHPLQDGE TLKAGIQRERAAVQSIRERADIIIDTTNLSVHDLRRAIEASFGEMGHELQHVTLESFGFK HGSPRDADLVVDVRFLPNPYWVPELRGYRGTDEPVADYVLSQDAAEPFIDHFITMFDSML AGYRHEGKNFITVGIGCTGGHHRSVAVTEEIARRLRERGDLDVSTLHRDIARD >gi|227860915|gb|ACLH01000005.1| GENE 30 32532 - 34586 1547 684 aa, chain - ## HITS:1 COG:Cgl1554 KEGG:ns NR:ns ## COG: Cgl1554 COG0322 # Protein_GI_number: 19552804 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Corynebacterium glutamicum # 1 684 1 695 696 985 75.0 0 MADPSKYRPAPGSIPTDPGVYKFRDENRRVIYVGKAKNLRARLSNYFQDITQLHPRTRQM VLTAASVEWTVVASEVEALQLEYTWIKRFDPRFNVMYRDDKTYPMLAVSVGESIPRAFFY RGPRRKGVRYFGPYSHAWAVRESLDLLTRIFPMRTCAKGVFNRHERLGRPCLLGYIGKCD APCIGRVSPEEHRETVNQLISFMNGNTAPVRKRVTQRMEEAAENLEFELAARLRDDLGAI DKLMEQQAVVLPDGTDADLIAFSSDELEAAVQIFHVRTGRIRGQRGWVVERSGDQATTDV VEEGQADPGLPALIQNFLIQFYSDAVERQRQEAAEDAKLERRGVDQESHAEPRQGNAIPR EILVQALPEEAEEVKIVLEELRGAQIDVRVPQRGDKRALLETVERNAKEQLKQHKLKRVG DLTARSAALQELQEALGMDSAPLRIECTDISHIQGTDVVASLVVFEDGLPRKSDYRRYRI KEAAGDGRSNDVGSIAEVTRRRFKHHHDDKRAVPDEELENTTFAEEMVREEAASQTKRSS YPPQLFIVDGGAPQVAAAQAVFDELGIVDVTLIGLAKRLEEVWVPGDDEPVILPRNSQAL FLLQHLRDEAHRVAISYHRQQRSKRMRSSVLDAVPGLGPQRRTDLVKHFGSVKKLKEASV EEIAEVKGFGPKLAQTVFDHLHAS >gi|227860915|gb|ACLH01000005.1| GENE 31 34586 - 35209 524 207 aa, chain - ## HITS:1 COG:no KEGG:cauri_1195 NR:ns ## KEGG: cauri_1195 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 207 1 207 207 405 100.0 1e-112 MTDPQVPLGHEEREQSAHANKSSQSLRPPASSSAGGAQRMSEEQLLAYTSADPFAQTSSK PWEYEATSPFLRKVAIIWIILVMAAHLFMGFTVGLSFTGATVTTIDKFAFPGVGVVISIL SWLALTRPRLRANSDGVEIRNILGTRFYPWQVIYGLSFPEGSRMARIELPDFEYVPVWAL QSGDKQDVITKVRSFRDLEARYMPQDD >gi|227860915|gb|ACLH01000005.1| GENE 32 35296 - 35778 494 160 aa, chain - ## HITS:1 COG:Cgl1556 KEGG:ns NR:ns ## COG: Cgl1556 COG0054 # Protein_GI_number: 19552806 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Corynebacterium glutamicum # 1 154 1 154 159 189 69.0 1e-48 MSKEGLPTPKDVSGKGLRVAVVTATWNAEICDQLHRRALETAEAAGAIVTPLRVVGALEL PVVVQAAARTHDAVVALGCVVRGGTPHFDYVCDSVTQGLTRIALDESTPVANGVLTVNDY EQAVDRAGFADSAEDKGAEAMQAALETVHTLRTLDESNLK >gi|227860915|gb|ACLH01000005.1| GENE 33 35826 - 37088 1224 420 aa, chain - ## HITS:1 COG:Cgl1557_1 KEGG:ns NR:ns ## COG: Cgl1557_1 COG0108 # Protein_GI_number: 19552807 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Corynebacterium glutamicum # 1 211 1 212 214 299 75.0 9e-81 MSAADSAFSLDSVDQAIADIAAGKAVVVVDNEDRENEGDLIFAAELATPELVAFMVRYSS GYICAPLLPEDCERLNLPPMLAVNQDVRQTAYTVTVDLANGSTGISATSRCDTIRRLADP SSEPSEFTRPGHVVPLAARPNGVLERDGHTEAAIDLARLAGLRPAGVLCEIVSEEDPTDM ARSPELRRFADAHGLTMISIEQLIEWRRHNEQQVRREVETRLPTEYGEFRAVGYSNDVDK REHIALFVGDVESYSGAEDVPVRVHSECLTGDVFASQRCDCGPQLQESLRAVQEAGRGIV IYLRGQEGRGIGLVNKLKAYRLQDEGMDTVDANVEQGLPEDAREYSVAGQVLRDVGVKSV NLLTNNPHKGEGLQGFGIDATARTALATPATAENISYLRTKRDRMGHDLPQVAEWDQKHS >gi|227860915|gb|ACLH01000005.1| GENE 34 37100 - 37738 514 212 aa, chain - ## HITS:1 COG:Cgl1558 KEGG:ns NR:ns ## COG: Cgl1558 COG0307 # Protein_GI_number: 19552808 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Corynebacterium glutamicum # 1 201 1 193 211 238 64.0 8e-63 MFTGLVEEIGRVDSVEPQGDAVRLGIAASTVLSDAQLGDSIAVNGVCLTVAELGEGTFTA DVMKESLNRSSLGELEVGAPVNLERAVLPTTRLGGHIVQGHVDGTGTLLSRTPSEHWEVL RFSLPAELARYVVEKGSIAVQGTSLTVSALADGQGEPDAEAFFEVSLIPTTLRDTVFGSM KPGARVNLEVDVVAKYVEKMVHPNAHRVGTEG >gi|227860915|gb|ACLH01000005.1| GENE 35 37819 - 38748 459 309 aa, chain - ## HITS:1 COG:Cgl1559_2 KEGG:ns NR:ns ## COG: Cgl1559_2 COG1985 # Protein_GI_number: 19552809 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Corynebacterium glutamicum # 118 307 1 187 188 186 53.0 5e-47 MGAVILDSAGQVVGVGATQPPGGPHAEVMALRDAGDKARGGTAVVTLEPCNHTGRTGPCA QALIDASVAAVYYLHPDPTPQAGGGSTTLRRAGITVGQLSAPTERADALEPWLGAVALGR PHVTLKFAQSLDGFTAAVDGSSQWITGEQAREHVHRDRTQRDAILIGTGTALADNPSLTA RFPDGSLRPQQPRRVVIGSRNVSHGGKTNLERLGFEHYASPQEALAELYTTGARDILVEG GAGLATSFMELGFVDRIQAYIGNVVLGEGRGVLTSAVSSNLAGAQRWRRCAVTELGEDLL VEYRKDEKL >gi|227860915|gb|ACLH01000005.1| GENE 36 38844 - 39521 878 225 aa, chain - ## HITS:1 COG:Cgl1560 KEGG:ns NR:ns ## COG: Cgl1560 COG0036 # Protein_GI_number: 19552810 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Corynebacterium glutamicum # 8 223 6 218 219 306 71.0 2e-83 MSAHSPGPIISPSILAADFTRLGEEVEAVANADWIHVDIMDGHFVPNLSFGPDITATVDG ITSQTLDVHLMIEDPEKWVETYAKAGADCIIFHVEAVADKDAAIALARKIRDLGVRAGFS IKPGTPIEPWLDALEHFDEVLVMSVEPGFGGQSFMPDQLDKVRTLRAAIDERGLNVLIEI DGGISAETIRSAAEAGCDAFVAGSAIYKQADKAAAVEELRRLATL >gi|227860915|gb|ACLH01000005.1| GENE 37 39550 - 41145 1017 531 aa, chain - ## HITS:1 COG:Cgl1561 KEGG:ns NR:ns ## COG: Cgl1561 COG0144 # Protein_GI_number: 19552811 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Corynebacterium glutamicum # 2 528 6 510 511 523 58.0 1e-148 MSGGFRSRSKSGDPAARTERSEQQRGGGRTTARGGTNRQAKVKREHRGGQRHHNRRDGHS ASFMSAARRCGVDVPRAVAFEVLQRVEADDAFANLTLPKAVSANNLSGRDAAFSTELTYG TLRSEGVLDAVIATCASRGLEAIAPDVLTALRMGTYQVLYTRVEAHAAVDTTVRLVEAAG HEKAKGFANGIMRTITRTPAHEWLDKLAPQEEVAAVAFRHAHPEWIARSFGRALGLLDTG DSKLNAEQTTELERALEADSERPLVHLVARPGEISAEELALITGCEEGHYSPYAVYLEQG DPGSLEPVRQKLAAVQDEGSQLIARAVTEAELIGEDTGRWLDLCAGPGGKAALMGAIARI EGAEVDAVEVSPHRATLVEKTVGDLPVRVHRADGRAPGLSAGFDRVLVDVPCSGLGALRR RPEARWRKTESDIAELNQLQSELLESALEFVRPGGVVVYSTCSPDLRETRGIVDAALERH GAGAEVRIEELDARDVLPEMGDLGSELSAQMWPHRHGTDAMFFAVLRRVAD >gi|227860915|gb|ACLH01000005.1| GENE 38 41142 - 42140 693 332 aa, chain - ## HITS:1 COG:Cgl1562 KEGG:ns NR:ns ## COG: Cgl1562 COG0223 # Protein_GI_number: 19552812 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Corynebacterium glutamicum # 1 314 1 306 315 414 69.0 1e-116 MRIIFAGTPEPAVVALQKLIESHHEVAAVITRPDARRGRGRSLHPSPVKALAEEHGIEVL TPTTLKQGTEDGDALRARLAEIAPEAIPVVAYGNLITEDLLSLPKHGWVNLHFSLLPTWR GAAPVQAAIAAGDERTGATTFRIDQGLDTGDILATMEETIRPTDTADDLLTRLAYAGGDL LVETMNGLEDGSIIPQPQEGEATYAHKIATEDARIDWTAKVDVIDRHIRAHTPGPGAWTL LGESRLKVGPVSVVEPAELGELSDTTALTSLQPGEVHVAKKEVMVGTGSTPVRLGQIQPP GKKMMNAADWGRGLSSQASQAAEGGQVEVKFS >gi|227860915|gb|ACLH01000005.1| GENE 39 42229 - 42738 434 169 aa, chain - ## HITS:1 COG:Cgl1563 KEGG:ns NR:ns ## COG: Cgl1563 COG0242 # Protein_GI_number: 19552813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 1 168 1 168 169 222 63.0 3e-58 MTVREVRLYGDPVLTTRAEEITEFGPSLERLAQDMLETMEDAGGVGLAANQIGVTKRIFV FDCSHFQHGLRGAVINPEWEAVGEEMQLGTEGCLSIPGISQPTERFSTVRLRGYDPQGRP VSMLASGLMARCIQHETDHLDGVLFLQRLSDELRKESMKTIRQAEWFNS >gi|227860915|gb|ACLH01000005.1| GENE 40 42834 - 44876 749 680 aa, chain - ## HITS:1 COG:Cgl1564 KEGG:ns NR:ns ## COG: Cgl1564 COG1198 # Protein_GI_number: 19552814 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Corynebacterium glutamicum # 4 680 5 688 688 815 62.0 0 MPKKTPAAQQPVARVLPLLGVAHLDREFDYLIDESDSQAAQPGVRVRIRFNGRLVDAILL SRASDSDYAGSLRYIDRVISPYAVYTPTMSALIESLAARYGGVRSDIIRTAIPARHAKAE EADVDTPWEELGTAEHPDLSAWSGYQHGESFVDSVLSGHIARAAWQIAPGEDWAGALAAL GTSVALQGGGVLMVVPDQRDLDCLEAAFRRHVSAKQITVLAHSTGPQARYRRYLSALTGQ ARIVIGTRSAAFAPVKDLKLAVVLNDGDDNLVDNLKPYAHSREVLSTRSAQEGCSLILAG HARTAEAQLLVESGWAHDLLPSDTALEKRRPNILAVGAYGINLARHMQGGTTAVSGPAFQ ATRAALDRGEPVLVQVPRKGYAPILACGHCASPARCRHCNGPLGLPSAGASRDESTDSAA LPTCRWCGRVDAHYRCSECGSPRLRAIVLGSERTAEEMGRAFPNTRVIQSGGATILDEIP AGPALVIATPGAEPRIAEGGYYGAALLVETGALLGRQDLRATEDTLAKWAAAATLVAPAR DGGAVIVAADEQLPLVGFLSRWDMVGAAAVELQARREVRFPPAVHMAAVDGADASLDAFL ELAELPEHAELLGPVPLPPGVSLPGDYDHERGGEPQRLLIRTPLGPRSELGQALRRANSV RSARKDVLPLRITVDPINIG >gi|227860915|gb|ACLH01000005.1| GENE 41 44888 - 46111 1340 407 aa, chain - ## HITS:1 COG:Cgl1565 KEGG:ns NR:ns ## COG: Cgl1565 COG0192 # Protein_GI_number: 19552815 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Corynebacterium glutamicum # 8 407 6 406 407 612 79.0 1e-175 MTDKAAQAVRLFTSESVTEGHPDKICDAISDAILDALLEEDPDAHVAVETLVTTGQVHVV GEVRTSGYVEIPQIVRKTLVEIGFTSSDVGFDGHTCGVNVAIGEQSQEIGAGVDASTEVR SGTFEDDDQYGAGDQGLMFGYATNETPEFMPLPISTAHHLSRRLTHVRKEGIVPSLRPDG KTQVTFAYDENDVPTRLETIVISTQHDPEVTQEWLAEQLRTHVVEWVVNDADLSQYYTED TELLINPSGSFILGGPMGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAMR WVAKNIVAAGLADRAEVQVAYAIGRAKPVGLYVETFGTAHEGLSDADIQAAVNKVFDLRP AAIIRELDLQRPIYRQTAAYGHFGRTDVELPWEDTSRADDLRRAAGL >gi|227860915|gb|ACLH01000005.1| GENE 42 46227 - 47522 704 431 aa, chain - ## HITS:1 COG:Cgl1566 KEGG:ns NR:ns ## COG: Cgl1566 COG0452 # Protein_GI_number: 19552816 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Corynebacterium glutamicum # 24 423 11 412 420 502 66.0 1e-142 MKDVQKIPDSSELRPAPTKSAGGRRILIGVAGGIAAYKACHLIRDFKERGDDVRVVPTEA ALNFVGAATFEALSGNPVSTTVFDAVDEVQHVSLGQQADAVVIAPATADLIARLACGRAD DLLCASVLVATCPVIIAPAMHTEMWLNPATQDNVATLRRRGITVMEPAHGRLTGTDTGAG RLPDPEQIAEFARTIIAGHRVDHNWQGRKVVISAGGTQENLDPVRYLGNRSSGRQGFALA EIAAQRGADVTIVAGNTEALPIPSGASVVRVTSTRDMQEAMNREAADADIIIMAAAVADY RPASVADSKMKKGAADDDLASLELVENPDILKGLVQRRENGEIKREAIIVGFAAETGDET TSVLEYAQQKFKKKGCDVLMANEVGEGKVFGQATSAGWILRRSSDPVVVAPGSKQVVAAQ ILDVVNEMLEK >gi|227860915|gb|ACLH01000005.1| GENE 43 47651 - 47953 479 100 aa, chain - ## HITS:1 COG:Cgl1567 KEGG:ns NR:ns ## COG: Cgl1567 COG1758 # Protein_GI_number: 19552817 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Corynebacterium glutamicum # 1 99 1 95 95 140 76.0 7e-34 MTNVTTPANSEAVKPEPVFDPPTGITDPPIDELLGKVSSKYALVIFAAKRARQINSYYQE QDEGVFEFVGPLVTPEPGEKPLSIALREIDAGLLDHEEGN >gi|227860915|gb|ACLH01000005.1| GENE 44 47992 - 48561 467 189 aa, chain - ## HITS:1 COG:Cgl1568 KEGG:ns NR:ns ## COG: Cgl1568 COG0194 # Protein_GI_number: 19552818 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Corynebacterium glutamicum # 24 189 1 166 167 234 71.0 9e-62 MADETARGRLVVLAGPSAVGKSTVVSRLRDDVDNLYFSVSMTTRQPRPGETDGVDYFFVS PEAFQEHIDAGDMLEWAEIHGGLQRSGTPAQPVQEAMAAGRPVLVEVDLAGARNVKAAMP EAETVFLAPPSWEVLVERLTGRGTEPQDVIDRRLHTAETELAAQKEFDHIVVNEDLDEAV AAISAILRG >gi|227860915|gb|ACLH01000005.1| GENE 45 48570 - 48890 484 106 aa, chain - ## HITS:1 COG:no KEGG:cauri_1181 NR:ns ## KEGG: cauri_1181 # Name: cihF # Def: putative integration host factor # Organism: C.aurimucosum # Pathway: not_defined # 1 106 1 106 106 119 100.0 4e-26 MALPKLTDEQRKEALAKAAEARKARAELKAALKRGETNLQEVLEKAETDEIIGKTKVSAL LEALPKVGKVKAKEIMEDLEIAQTRRLRGLGDRQRRALLERFGYGE >gi|227860915|gb|ACLH01000005.1| GENE 46 49161 - 50009 719 282 aa, chain - ## HITS:1 COG:Cgl1570 KEGG:ns NR:ns ## COG: Cgl1570 COG0284 # Protein_GI_number: 19552820 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Corynebacterium glutamicum # 10 280 2 272 278 298 59.0 1e-80 MTQPTRKTPSFGERLVAAGAERGRLCVGIDPHPHLLEAWGLSVDVDGLRTFTLRCVEAFA ETAAVVKPQVAFFERFGSRGFAVLEEALAGLREHGCLSLADAKRGDIGSTMAGYAQAWLG EDSPLRSDAVTVSPYLGVGALSPVFDLAEAAGRGVFVLAATSNPEAVALQSLSVDGRSVA QRVVDELAQRNASAVGTDNTVGALGVVVGATLEAPPALDQLNGPVLLPGVGAQGATPADV RQLTAAAPELGFANVSRAILSVGPDVADLRKAVLDTASEFRF >gi|227860915|gb|ACLH01000005.1| GENE 47 49993 - 53334 4314 1113 aa, chain - ## HITS:1 COG:Cgl1571 KEGG:ns NR:ns ## COG: Cgl1571 COG0458 # Protein_GI_number: 19552821 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Corynebacterium glutamicum # 1 1109 1 1109 1113 1827 84.0 0 MPKRNDINHVLVIGSGPIVIGQACEFDYSGTQACRVLKEEGLRVTLVNSNPATIMTDPEF SDHTYVEPIEPEFIEKIFQKEKEEGNPIDAVLATLGGQTALNAAVQLDRLGILKKYDIEL IGADIDAIERGEDRQKFKDIVASIGGESARSRVCHTMEEVHETVAELGLPVVVRPSFTMG GLGSGLAFNEEDLERIAGGGLAASPEANVLIEESILGWKEFELELMRDGDDNVVVIASIE NVDALGVHTGDSVTVAPALTLTDREYQKMRDQGIAIIREVGVDTGGCNIQFAVNPDDGRI ITIEMNPRVSRSSALASKATGFPIAKLAAKLAIGYTLDEVRNDITGVTPAAFEPTLDYVI VKAPRFAFEKFPGADDTLTTTMKSVGEAMGIGRNYISGLNKVMRSLEGKPSGFWTKPDEY FAGERATDVEAVLKDLERPTEGRIYDVELALRLGATVEQLHEHSHIDPWFLAELEALVEF REELVSAPVLDAELLRRAKVFGLSDAQIAALRPEFAGEDGVRSLRWSLGIRPVYKTVDTC AGEFEAQTPYHYSAYEMDPNAESEVCESSEKTKGKVIILGSGPNRIGQGIEFDYSCVHAA LELSRKGYETVMVNCNPETVSTDYDTADRLYFEPLTFEDVMEVYHAEAACGEVAGVIVQL GGQTPLGLAERLTAAGVPVVGTSAAAIDLAEDRGEFGKVLAEAELPAPAFGTATSFEEAR QVASNIGYPVLVRPSYVLGGRGMEIVYDEDSLRDYIERATEITSDHPVLVDRFLDNAIEI DVDALCDGEEVYLGGVMEHIEEAGIHSGDSSCALPPMTLGPEDIEKVRESTRRLAHGIGV KGLMNVQYALKDDTLYVIEANPRASRTVPFVSKATGVPLAKAAARVMLGASIAELREEGI IPSTYDGGSLPLEHPIAVKEAVLPFNRFRRPDGQLLDTLLSPEMKSTGEVMGLADNFGAA YAKGEMAAFGELPTEGTVFVSVANRDKRTLIFPIQRLAYMGYTIVATAGTAQMLRRNGVE CEVARKVSEATEGEESIVDQILGGKVDLILNTPAGSAGARHDGYDIRAAAVSVGVPLVTT VQGVTAAVQGIEALRRGDLKVRALQELEHDPAN >gi|227860915|gb|ACLH01000005.1| GENE 48 53365 - 54528 1659 387 aa, chain - ## HITS:1 COG:Cgl1572 KEGG:ns NR:ns ## COG: Cgl1572 COG0505 # Protein_GI_number: 19552822 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Corynebacterium glutamicum # 1 387 11 391 393 557 73.0 1e-158 MTSTTTTPAILVLADGRTFRGFGFGATGTTLGEAVFTTAMTGYQETMTDPSYNRQIVVAS APQIGNTGWNDEDNESHDDKIWVAGLVIRDLARRVSNWRAARSLPEEMEKQGIIGIGGID TRTLVRHLRNHGSIKAGIFSGEAAQRDVEELIAEVKNQPSMVGLDLSAEVSTDEVYTFPA VGEKRFTVVAYDMGVKTATPKNFAERGIETIVVPANTPFEEIKQYNPDGVFVSNGPGDPA TADTMVGIVRDILAAKYPFFGICFGNQILGRALGMETYKLKFGHRGINVPVRNQLTGKID ITSQNHGFALASPSGKEDPAGEEFDTDFGPAVVSHTCLNDNTIEGVALKDGMAYSVQYHP ESAAGPHDANPLFDQFIELMTEKSPNK >gi|227860915|gb|ACLH01000005.1| GENE 49 54635 - 56005 1591 456 aa, chain - ## HITS:1 COG:Cgl1573 KEGG:ns NR:ns ## COG: Cgl1573 COG0044 # Protein_GI_number: 19552823 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Corynebacterium glutamicum # 2 443 6 438 447 667 77.0 0 MTTYPDTGVLSAPAAGTLLITNVRPYGEGEPTSLLIKDGVIEAISAAADAGGVTPAVEAD RTIDGGGNVLLPGLVDMHVHLREPGREDTETIETGSRAAAKGGFTAVFTMANTSPVTDQP IIAESVWAKGQARGLCDVHPVGSITKGLEGKTLTEFGMMARSDAKVRMFSDDGKCVQDPQ LMRRALEYAKGLDVLLAQHAEDHRMTEGASAHEGEVAARLGLRGWPRVAEESIVARDALL ARDYGNRMHICHASTKGTVELLKWAKEQDIPLTAEVTPHHLLLTDDKLVTYDGVFRVNPP LREESDTLALRQALLDGLIDVVATDHAPHGSEDKCVEFEHAKPGMLGLESSLAVIAKLFV ATGLADWRFVARVMSERPAEITRLPGHGRPIAVGEPANLTIVDPEHEWVSDSTRLASKSE NNPYEGEEFGARVAYTILRGAVTYDLAAESASEAAE >gi|227860915|gb|ACLH01000005.1| GENE 50 56050 - 57021 982 323 aa, chain - ## HITS:1 COG:Cgl1574 KEGG:ns NR:ns ## COG: Cgl1574 COG0540 # Protein_GI_number: 19552824 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Corynebacterium glutamicum # 1 323 1 312 312 491 77.0 1e-139 MKHLINIADHSAEEILGLMDEADRFREALEGREVKKLPTLRGRTVFTLFYENSTRTRSSF ETAGKWMSADVINLSASTSSVKKGESLKDTGLTLASIGADAIIMRHPSSGAAQQLAGWVA PEGQGPSVINAGDGSHQHPTQALLDAVTMRQRLHLGADRSAAGTGFEGLKVTIVGDCLHS RVVRSNVDLLSTLGAEVTLVAPPTLLPFGVDTWPVRVSHDFDAEVPEADVVMMLRVQAER MNGGFFPSHREYASLYGLSKDRAAAMKKDAIIMHPGPMVRGMEINYAVADYDNTAVLQQV NNGVHVRMATLFTLLTNGENAGI >gi|227860915|gb|ACLH01000005.1| GENE 51 57022 - 57612 647 196 aa, chain - ## HITS:1 COG:Cgl1575 KEGG:ns NR:ns ## COG: Cgl1575 COG2065 # Protein_GI_number: 19552825 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 12 187 10 185 192 254 78.0 9e-68 MSETGTHAESNELLSSKDVARTVARIAHQIIEKTALDSSDSPRVLLLGIPSGGVPLAQRL AEKIEEFSGVEVPWGSLDITLYRDDLYARPHRALQPTTVPDGGINGATVILVDDVLYSGR TIRAALDALADIGRPDIIQLAVLVDRGHRQVPIRADYVGKNIPTARDEDVTVYNADIDGR DAVVLTRFTAQPGKEA >gi|227860915|gb|ACLH01000005.1| GENE 52 57774 - 59171 817 465 aa, chain + ## HITS:1 COG:Cgl1576_2 KEGG:ns NR:ns ## COG: Cgl1576_2 COG1090 # Protein_GI_number: 19552826 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Corynebacterium glutamicum # 149 446 1 298 359 350 58.0 4e-96 MSFTTQHVVPAPREEVWQWHTRPGALARLTAPFGFMTPLQQAESLADGTSILGFPGGLKW VARHDLSRYQPRRSFADVCINAPFRSLANWRHEHFFEDHPEGTLITDKVDTRIPTGPVES IFAYRQQQLIEDFRFAQRLGALNVEPRTIAITGTHGTIGTAVAAQLGTLGHTVIPLVRSN PGAGERLWRPTLPAKDLLDGVDILIHLAGEPIFGRFNTAHKEAIRDSRVGPTHLLAQLAA ETPSVTAMVCASAIGIYGPDRGDEELTEDSERGEGFLADVVTAWEDACAPAREAGKRVVN LRTGIVQSANAGILPLLRALFSTGLGGSFGKGNMWNSWVGQDDLSDMFVRAALDPAWSGA INAVSPNPVLNRDYVDALGSLLHRPTVIPIPSVGPALLLGKEGARELALANQKVLPTRAE ALGHTFRYPDIAPALAHELGGEKLVEAPTCAPEADGSGSVGAGKD >gi|227860915|gb|ACLH01000005.1| GENE 53 59200 - 59715 515 171 aa, chain + ## HITS:1 COG:no KEGG:cauri_1173 NR:ns ## KEGG: cauri_1173 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 171 1 171 171 330 100.0 1e-89 MTDTTNHDDAQQRQLEPDTPIDEVSLERIAEIFESEGLEYRIEEQKTQDGQTVNLLRTGF SNAAIAFQLVGSSLIVDSVWRGSVPASEGPALLMHINAWNQDHFTPTFRFFEAPDNALAV SGARDLDVAHGASRNQLGAFVMSTLDAVLQSFEWIEQQYPQLVTWKEHNHD >gi|227860915|gb|ACLH01000005.1| GENE 54 59708 - 60229 565 173 aa, chain + ## HITS:1 COG:no KEGG:cauri_1172 NR:ns ## KEGG: cauri_1172 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 15 173 1 159 159 241 99.0 6e-63 MTNPTTPTAEDPHALPEVTLDRIIEAMRTFDIELEPVSGRDDAATANLNGLPCMFAVLES VAIVRCDVPTDVNYAKADAGLFLAANQINSVAMGARAVIADFDGMLLVRTEADIPCAAGM TDEQLAAALRASVDGVINAQNAMVAAAEEMAKLGSESAAQAGEGAEGAQGEQQ >gi|227860915|gb|ACLH01000005.1| GENE 55 60277 - 60750 489 157 aa, chain + ## HITS:1 COG:no KEGG:cauri_1171 NR:ns ## KEGG: cauri_1171 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 18 174 174 248 99.0 8e-65 MCELIDADYALIEASPEPEADADAAADSAESARRVLQTGVPHIAVHCELDAEGEVLSAFA SWEGTLPAHLEPEVAAVVAELNWASVAPTLSFLVEEDAKGNTEIHLGANRAMGVGEGLSL AQLGHFLLSSLASFAEFFDVVAQRFPQAVTWDKEEQA >gi|227860915|gb|ACLH01000005.1| GENE 56 60747 - 61277 520 176 aa, chain + ## HITS:1 COG:no KEGG:cauri_1170 NR:ns ## KEGG: cauri_1170 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 176 1 176 176 302 100.0 4e-81 MSQDSNQNQNASASSDPFDILSGSPLATVGRDRVLSVLNGAELDMAATAHPEDATTAVAR LNDLDWVITVEEGLVRIESVLSTQLDADMLPIFHVLCNEFNSGAFDGRALVGLVEDEVEL RGDACFVTTAGLNEDQLFHALNLGIINAQEALLSVLDAFNAAARELASDVDGTESD >gi|227860915|gb|ACLH01000005.1| GENE 57 61281 - 62147 1061 288 aa, chain - ## HITS:1 COG:RSc0138 KEGG:ns NR:ns ## COG: RSc0138 COG2326 # Protein_GI_number: 17544857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 22 271 20 263 275 210 44.0 3e-54 MVESMAKFKIEDALALRAGKNFQIDSVDASATPGFDGDKAALDARFSKYDDELYELQERL FANGRSYGEDAPAVLIILQGMDTSGKGGAIRHVLSTFDPQGTTTVGFGKPTEEELEHDFL WRIRKHDPQPGQIVAFDRSHYEDVLIQRVHEWVDEEEVDRRIEAIRDYELELTAKGVKVI KIFLHLSKEAQNENLLERTEREDKFWKYDPADVEERAYWDEYMAAYQDAIRRTDENYAPW YVIPTDNKKYARMALKFLIVDLLRHLDLEWPAPDFDPEVERQRIKDAD >gi|227860915|gb|ACLH01000005.1| GENE 58 62161 - 62916 696 251 aa, chain - ## HITS:1 COG:Cgl0132 KEGG:ns NR:ns ## COG: Cgl0132 COG0730 # Protein_GI_number: 19551382 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 1 249 1 251 252 128 37.0 1e-29 MSVLAIPLVVLLTVIAGSCLQRVSGMGLGLIGGPILTLFLGPVEGIMVINVLACLNAILT TYSMRENVDWGKWLRIGPFMVLGSIPAALLIARIDTAALLVLVGAALLIALAVVVFGRKF VPQMSGTGPAISAGIVGGFTNTLAGVAGPVITVYAQAARWPKEVLAPTLQPCFFIGGLSS VLTKFFLGSGGFEGLHWLVWPCGVVGMCVGILLGKKIAGRVSRDKAHKLSLWLASLGALS ALLRGLFTLGA >gi|227860915|gb|ACLH01000005.1| GENE 59 62923 - 63399 315 158 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 6 156 7 159 164 125 42 7e-28 MPTHAVCPGSFDPITLGHVDVFNRASELFDKVTVLVTGNPDKPSGLFSVEERVDLIRRTV SPEIEVDWWGGLLVDYTSAHGIDTIVKGLRSSLDYEYELPMAQMNRRLSGIDTVFLLTDE KYGYISSSLCKQVAQYGGDVTGMFPDHVAAAVMERFRG >gi|227860915|gb|ACLH01000005.1| GENE 60 63402 - 64004 441 200 aa, chain - ## HITS:1 COG:Cgl1296 KEGG:ns NR:ns ## COG: Cgl1296 COG0742 # Protein_GI_number: 19552546 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Corynebacterium glutamicum # 2 186 4 190 194 245 70.0 4e-65 MTRIIAGEARGRTIKVPEAGTRPTSDRAREGLFSSLNVRWGFIDSRVLDLFAGSGALGLE AASRGAEEVVLVENNAAAVKVIRHNIGVVKHPRVEVREMKASSYLATAPRGYFDMVLADP PYEFDDVDGLLAAIEPALDDDAIVVIERHVDSPHTQWPEGFEPTGQKLKKRTFGIARFDM AIYHRSADSSKTDTTGTQED >gi|227860915|gb|ACLH01000005.1| GENE 61 64047 - 66143 1590 698 aa, chain - ## HITS:1 COG:Cgl1294 KEGG:ns NR:ns ## COG: Cgl1294 COG1200 # Protein_GI_number: 19552544 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Corynebacterium glutamicum # 1 698 1 707 707 722 54.0 0 MLGWQDDRALTEILAKKDAAAFKRAFGYTTCGELLSHYPRDYIRHNKDVGLGGAEDGDHV TITGVIEDLRVKHTSKAMVFILYMDSGVQASFFNAHYVQRVLGRGMRVMLSGKLKYFRGY PSLQHPDFLILDPGRYQESLLDSTTGQGTGSLKKLSQFGSLETFLQREWIPVYPASGKVT SWYIMGAIHKVLEHTPPIPEPLDYRMMVTLDQAVREIHEPGDNGPERAIQRLKYNEALSV GLVMALRQRDVKARTATPMPAILEGYRDELLSGLPFALTDGQRRVIGEIDADLCGTAPMM RLLQGEVGSGKTLVATCAMLQAVDAGKQAALLAPTEVLAAQHGASISASVPDGVTVTVLT GSMKTAEKRKALLEIVSGEADIVIGTHAIIQDSVEFFDLGLVIVDEQHRFGVEQRDSLRT KTREGTSPHLLVMTATPIPRTIAMTVFGDLAVSTLKELPGGRKPILSAVVPEWKPEWVRR AIERIREEVDKGHQAYIVCPRIEGEGGVETMSLQLRNLPLRGLRVEMLHGKMPDKDQVME SFARGEIDVLVATTVIEVGVDVPNATVMLIRESENFGVSQLHQLRGRVGRGGNESVCLLH TTAEPDSKSFRRIKAIADTPSGFDLAELDLQQRHEGDILGTLQSGTKRTLKLLDLINDRD IVERTHSDAAALVERNPELAEELTHNLSADEQGFLEKN >gi|227860915|gb|ACLH01000005.1| GENE 62 66147 - 67565 1002 472 aa, chain - ## HITS:1 COG:Cgl1293 KEGG:ns NR:ns ## COG: Cgl1293 COG1461 # Protein_GI_number: 19552543 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Corynebacterium glutamicum # 6 424 40 479 567 259 44.0 8e-69 MSYPAELDARGLHEWAARTVEELQRRRVEINALNVFPVPDSDTGSNMAHTMESALAEANK GEVDVAEALAIGSVRGARGNSGMVLSQVLRGVADATTDSRVDGAVLADALTLAVTLVDRA LAAPVEGTIITVLRAAATAASQAAGESGAELHGILLAAVEAASKALAETPSQLPALREAG VVDAGGTGFVILLECLLAQVTGHAPVSQPLTRSVPLRSEESAAREPQAGEVLAEIEALFF FEGSLSDIEEALAPLGNSLVIARATETSASVHIHSAEAGAVIEKAYALGKVSNLRLEALP QAGQAASCEDSAGGGGTHRRIFAAVPEGAARELFEKAGADVVKPGEELQSAGEEDLFLPN GCGGDPGKATVIPTDSLVAGLAALSVYAPSSAQTDDVLAAMKDAAGSMRVAYPDRESVAG ILEACRTQLGYGGEQITVLTGLEIEEEELARELGVDVVVLHVPGLRTEIGVE >gi|227860915|gb|ACLH01000005.1| GENE 63 67576 - 68223 375 215 aa, chain - ## HITS:1 COG:Cgl1292 KEGG:ns NR:ns ## COG: Cgl1292 COG0692 # Protein_GI_number: 19552542 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Corynebacterium glutamicum # 4 215 9 249 249 227 56.0 2e-59 MSHIDTSHIHYSWMPHIRQALEDNLPRIEREIGAEFLPPAEDVFAALSMPLEDVRVLIVG QDPYPTPGHAMGLSFSTRSGVPAPRSLKNIYAELGDDLGIPGRADGDLRAWFEQGVLLLN RVLTVAPGQAGSHRRLGWEAITEAAIRALAGRDIVAILWGRDAQACQAFLPGTECITSPH PSPLSARRGFFGSHPFSRANAALEARGVPAVDWRL >gi|227860915|gb|ACLH01000005.1| GENE 64 68220 - 69185 534 321 aa, chain - ## HITS:1 COG:Cgl1291 KEGG:ns NR:ns ## COG: Cgl1291 COG0611 # Protein_GI_number: 19552541 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Corynebacterium glutamicum # 8 320 16 329 329 350 60.0 2e-96 MTVGLSHTLDQAGERHVIHEIVTAAPSALNGDDAAVLYPAAPNSRTVAATDMMVEGRHFR RDWSTAAEIGQKAIVRNFADIEAMGARPTAALLAIAAPGDTPVDFVRGIAQGIAERCAVY NAELVGGDLTRSESLIINVTALGSLGGSGAALTLDGARAGQKLVAHGKIGYSGAGLALLQ RYGRALPPELEEFWPLVDAHCAPSLTPGRGVIARATGSTSMTDNSDGLVRDVGHLAQRSG VHIDLDRGAIAPDPLLAAAGALLDIDPWEWVLTGGEDHTLLATTYKSAPSGFREIGRVMR GTGVTIDGEEPRYNGGWEGFA >gi|227860915|gb|ACLH01000005.1| GENE 65 69278 - 70192 840 304 aa, chain + ## HITS:1 COG:no KEGG:cauri_1161 NR:ns ## KEGG: cauri_1161 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 304 1 304 304 523 100.0 1e-147 MDTQFNRTAIYISLGISIAMVFAVIFGAKYVFTSAAQQPVALPPTPSEAADSPECAAVVD ALPDKLMGYPRVDLVDPAPAGAAAWAQSSEDKVTLRCGVDLPQQFTDYSRTVESDGESWL QVIDATPGSNLTTWYSTKHTPAIAVTTSSEDAQDDAPEGLKEAFKQLEKKSQKANPAPLS QLQAGPDSMCPALEKALPETLAEGYERRTDVGDKNTWVYSAPGQEEIVVRCGVASPENYR AGVQLQQVNDVPWFEDTTLAEGTTAGTWFALGRAEDLALSAPQDAANSALVRLSDALVAA TPSQ >gi|227860915|gb|ACLH01000005.1| GENE 66 70222 - 71292 919 356 aa, chain - ## HITS:1 COG:Cgl1289 KEGG:ns NR:ns ## COG: Cgl1289 COG1181 # Protein_GI_number: 19552539 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Corynebacterium glutamicum # 7 355 9 358 360 403 60.0 1e-112 MTEAKPVRVAVVYGGRSSEHSVSCISAGAIMEHLDPEKYEVVPIGITREGTWTQGNRAGL NIVDGRLPEVELHDELALSLNPATRGRIHNVTRHEHYTEVDVIVPVLHGPYGEDGTVQGL FELSGIPYVGAGVLASAVGMDKEFTKKLLVAEGLPVAPQEVLTGEATLDDLQKERLGLPV FVKPARGGSSIGVSKVSAWEDLEAALTLAYESDDKVLIEPEISGAEVEVGVLERPDGSLQ ASVPAKILGTTESEEGFYDFDAKYIDEGVSAAIPAPLSEELTAELRQRAIEAFRALGASG LSRVDFFVSDYSYCINEVNTFPGFTPISMYPQVFAAVGVGYAELLDTLIQTALARS >gi|227860915|gb|ACLH01000005.1| GENE 67 71314 - 72312 815 332 aa, chain - ## HITS:1 COG:Cgl1288 KEGG:ns NR:ns ## COG: Cgl1288 COG0240 # Protein_GI_number: 19552538 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 332 1 332 332 422 69.0 1e-118 MANVAVMGAGSWGTTLAKVFADAGNDVRLWARREELAEAINTRHENPDYLPELPLPESIK ASTDPATALQSADIVIFGVPSQTLRGNLEKWAPLLPEEATLVSISKGVEKATLNLMSEVI ADAAGVSSDRIAVLSGPNLAKEVAQEQPAATVIACSDAARAEAVQHAAAAPYFRPYTNTD VIGAEIGGACKNVIALACGMAAGKGLGNNTMATIITRGLAEITRLGVKLGADPFTFSGLA GMGDLVATCSSTLSRNRTFGYRLGQGGTLEEATAATNGQVAEGVISSDSIFRLAQRADVE MPITQAVYGVCHRGVTVDDMIVALMGRTKKAE >gi|227860915|gb|ACLH01000005.1| GENE 68 72461 - 73459 1138 332 aa, chain + ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 3 166 27 193 194 233 68.0 6e-61 MPKAKNMHETDKDIRSEVFISGRHQEIPVDPADEFKRTTLAAGAVLWRGDPHDPEVALIH RPHYDDWSLPKGKVDPGESLPTTAAREIFEETGYSVRLGKLIGKVAYPVQGRTKVVYYWL ARVLDGEYTPNEETDELRWMKIDEASSLLSYDVDAQVLGKAQKRLRLAPTTRVLYVRHAR AHQRRSWEGDDDLRPLDKKGRRQAEMLVPMLTPFHPTAIYSAPPQRCQHTAAPLADELGM DIAVNKAFGDDVFADSPEDARAAFQRVVDGGGVPVIVSQGLTIPGILESYAPKFLKKSID ELKFKKASVWVLSFNDGELTGADYLASPLPVR >gi|227860915|gb|ACLH01000005.1| GENE 69 73509 - 74393 775 294 aa, chain - ## HITS:1 COG:no KEGG:cauri_1157 NR:ns ## KEGG: cauri_1157 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 294 1 294 294 535 100.0 1e-151 MSNPYQGFSGESGNQFGGVGGYGGYDYRDAAGYGHQLPGSYGYQQSGSYGEHQPGAWSGN PPGGAPAQPIDAMDIVGQSFKGYLKQPVSGMLAMLVHLIISFALLFVPGTVLGGVFAAME ESGTDIEPLVPTVGIPLMVVMGLAAFAYLFWLMANLFNGSRKIADGEKVTFRDYFRFGQL NGCAGVYACFFIVVMLGSIAGGFPGLILYGLLWPAPVIKADNPDKPLMDCFREALDLIME NLGQSLLFILVCSLISSLLVFIPIVGFLAAYPIWALGMVLFTRAMQRRPAARWE >gi|227860915|gb|ACLH01000005.1| GENE 70 74469 - 75059 865 196 aa, chain - ## HITS:1 COG:Cgl1285 KEGG:ns NR:ns ## COG: Cgl1285 COG0066 # Protein_GI_number: 19552535 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Corynebacterium glutamicum # 1 195 1 197 197 274 70.0 8e-74 MEKFVTHTGVGVPLRVSNVDTDQIIPARYLKSVKRTGFADGLFSNWRSDENFILNQEPFK EGSVLFAGPDFGTGSSREHAVWALAEYGFKAVFSSRFADIFRGNSGKAGLLTGLMEQEDI ELIWKQLESGETETTVDLEARTVTVGGNSYTFEIDDYTRWRLMEGLDDIGLTLRNEGDIE AFESTRPGFKPRVVAS >gi|227860915|gb|ACLH01000005.1| GENE 71 75076 - 76518 1463 480 aa, chain - ## HITS:1 COG:Cgl1284 KEGG:ns NR:ns ## COG: Cgl1284 COG0065 # Protein_GI_number: 19552534 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Corynebacterium glutamicum # 2 472 11 481 481 785 82.0 0 MTEKLTLAEKVWRDHVVRKGEGGEPDLIYIDFQLLHEVTSPQAFDGLRLAGRTMRHPELH LATEDHNVPTVGIKTGNLLEIKDEVSRTQVSTLRKNCEEFGVRLHSMGDAQQGIVHTVGP QLGITQPGMTIVCGDSHTSTHGAFGSIAMGIGTSEVEHVMATQTLSLKPFKTMAIEVSGE LAEGVSAKDLILAIIAKIGTGGGQGHIIEYRGEAIRKMSMEARMTICNMSIEAGARAGMV APDETTFEYVKGREFAPQGEDWDAAVEYWRTLPTDEGAEFDTVVEIDGSALTPFVTWGTN PGQGLPLSAVVPDPEECGDDGEKAAVEKALAYMDLTPGTPLRDIQIDTVFLGSCTNARIE DLRAAAEVVKGRSIAADTRMMVVPSSAVVKAQAEEEGLDKIFTDFGAEWRTAGCSMCLGM NPDQLKPGERSASTSNRNFEGRQGPGGRTHLVSPAVAAATAVLGHLAAPADIVDAAVAGA >gi|227860915|gb|ACLH01000005.1| GENE 72 76567 - 77280 634 237 aa, chain + ## HITS:1 COG:Cgl1283 KEGG:ns NR:ns ## COG: Cgl1283 COG1414 # Protein_GI_number: 19552533 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 3 227 8 235 235 199 51.0 3e-51 MGEYSAVSGIKVLDRAVAIMMAATNRPSTLNELCETTGLPRATAHRLATALEAHRILTRT PDGKWGAGPALPGNRDRIIETAGPIMEELLDATGESVQLYELSGTTRTCIATREPEIGLH NVVPVGRQLPLTSGSAARIFAAFADVHVEDAIFSAHDVELARTNGYSESIEERESNLASV SAPVFDGAGNFIAVLSISGSAERFRPSPAEKFADVLVSASHRLSAALSNGAPNNGNR >gi|227860915|gb|ACLH01000005.1| GENE 73 77333 - 78136 557 267 aa, chain - ## HITS:1 COG:no KEGG:cauri_1153 NR:ns ## KEGG: cauri_1153 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 267 1 267 267 486 100.0 1e-136 MMKKSPQRLLSRFVSGFGSVVGACSLAIALATPATAVEGVPVRQGQKVAAADGTLCSVGY VEASRAWTSAHCGLNGEQMYNEAGQHVGTLRWFKPSGAAGHDLAYIQFAGGTYSAGNPLT GDGMAPVPGEGATVCFDGQSASRQCGTAVRGPGIFPGMNYAVDVSLAPGDSGGAVSVPDQ PGVVGIYQGITQTNREGRTVTFSNYARMPHADELARLPHQGWVPRRPNREPGNPVRVVQE KGEALSSTSSAGPEGLRGLAMYFGLSI >gi|227860915|gb|ACLH01000005.1| GENE 74 78313 - 78579 238 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIMRCVAVAIVQVVHVIAVRDSYVAAALAVLVIVVLVNGVLGCLALVPVAFMLAVDVAI VDVVSVIAVRECDVAAAFAVGVRVLVVN >gi|227860915|gb|ACLH01000005.1| GENE 75 78708 - 79415 477 235 aa, chain + ## HITS:1 COG:no KEGG:cauri_1151 NR:ns ## KEGG: cauri_1151 # Name: not_defined # Def: zinc finger protein 768 # Organism: C.aurimucosum # Pathway: not_defined # 1 235 1 235 235 375 100.0 1e-103 MTSTRSLRPVAAFAAIAAVGFLTVGCSTSADMAAPSTPGEVSGEPTFENTYPAFQPLNDD AELHVPDSADEGAPAGPEPTLPDTATDQPAGQAQQPDTQAQGVQGAQPGAGQHQTAQDSK MATYNSLSGQLPQGEANGAAVNVHGTPATVCQMGDGYNIAFVMAGANTSCDFARSTAGRL MTLAPSSQDDLRAYIPAQVTVNSSVTQQNYSLACNIDEHEVIRCTGGNNAEVLIV >gi|227860915|gb|ACLH01000005.1| GENE 76 79568 - 79786 66 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNKCSGPSSPRHASGITTDSIRAQALRANVSIAAESGNEVRDFICVKGASTCRFVQPFG DPIVFSKSATDS >gi|227860915|gb|ACLH01000005.1| GENE 77 80274 - 80603 340 109 aa, chain + ## HITS:1 COG:no KEGG:cauri_1150 NR:ns ## KEGG: cauri_1150 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 109 1 109 109 213 100.0 2e-54 MSKETPNQSPDLDPVIHPINCLRICAALYSTGATAGRQMKHSKLAEFSELPADTLSKQLK HLEGHDFISRTREYGSTRAKDAVWVALTEAGTQAYVQHVQTLKAMVEGL >gi|227860915|gb|ACLH01000005.1| GENE 78 81298 - 81933 353 211 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262182539|ref|ZP_06041960.1| ## NR: gi|262182539|ref|ZP_06041960.1| hypothetical protein CaurA7_00964 [Corynebacterium aurimucosum ATCC 700975] # 1 211 1 211 211 345 100.0 2e-93 MPLQQTALLIPDVIATGLKTGELIRSGSVVRNTAGQIVKHLAEVPIEPNTAVKAVEAVRV AAGHGAELTRKYPVVAGTIGLTALAAGVTVAALSVRANRARKAKIQERVNVEDRFAAVST AWIKAAEAGAVTSEIVSEVQAAWEEYDASNKEWHTQPNELAVSLMQLVRTWNIQNGLRKN LPATTDSSTDDVVVDFSAHLAAQREFLTATA >gi|227860915|gb|ACLH01000005.1| GENE 79 82143 - 82409 283 88 aa, chain + ## HITS:1 COG:no KEGG:cauri_1148 NR:ns ## KEGG: cauri_1148 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 88 1 88 88 158 100.0 7e-38 MVNVRLFVTDFEGMIMKTIYKTNQWKGYGKQNYYWNEYRLDGDTVHKIKCNRFKYFDGDE SVWETEEKEVESWAKDDPDMPDWLHKYL >gi|227860915|gb|ACLH01000005.1| GENE 80 83032 - 84522 2001 496 aa, chain - ## HITS:1 COG:Cgl1263 KEGG:ns NR:ns ## COG: Cgl1263 COG0008 # Protein_GI_number: 19552513 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 6 493 2 489 493 788 79.0 0 MTKPTSDVRVRFCPSPTGTPHVGMVRTALFNWAYARHTGGTLIFRIEDTDAARDSEESYQ AIIDSLNWLGLGWDEGVNVGGPDEPYRQSQRMDIYADVLQKLKDGGYVYPAYSTNEEVQE RHKAAGRDPQLGYDNFDRDLTQEQIDAFEAEGRKPVWRLRMPDKDWSWTDLVRGEMTFKS ETQPDYVVARSNGAPLYTLVNPVDDALMGVTHVLRGEDLLSSTPRQLALYEVLVELGIAK KTPEFGHLPFVMGEGNKKLSKRDPQSNLFNHRDNGIIPEGMLNYLSLLGWSLSADQDVFS VDELIANFDVHDVLGNPARFDQKKLEAINADHIRLLKPEDFAQRLRDYLTEYTDFPADYP EEKFAFAADLVQTRIKTLSDAYGLMSFLTTPDAELELDEKAARKNLKEEAVQPLEVSIAK LEELGEWKTDEIEKVLSAALIDDLGLKPRKAYGALRVAISGQQVSPPLFESMELLGKEST LTRLKAAQALTPWSAE >gi|227860915|gb|ACLH01000005.1| GENE 81 84694 - 87063 2246 789 aa, chain + ## HITS:1 COG:no KEGG:cauri_1146 NR:ns ## KEGG: cauri_1146 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 789 1 789 789 1484 100.0 0 MARTRYVALLTCATLLFSPATAVAGPDDGKHVATQTHIDSPKAFWEGNALNLKSHSASSD HDLADTVTWVGKGWNQNGTNQYQFTVPEDPALAFVGKPGETYYMAPASVQGSLDPVWMGF GADTELPVDDFRDNIASLDLLSVDGPGDVEMFGYYPGPGGLQRFFGTTEGAPHSAWLTSG THTHNYTVFSKPGRYELTYQTSARGKDGSLITSKPTTTSIQVGGQRPADEKTPSLKERFD QASTGDASQKDYRLSITPKKTGDKDGDERLSSIDFSGGSDGTLTLLIDGYFLTDLAVKNG KAHFDEFLGPEDSTIQAVYTPEDGSPRWVSEELAYSENAELSTTSKTSAESWTETTNPRQ LFSGEEVSLSDTGLSARVVPEGEDATRIILEAADKNLEGYVHGGFFSKGSSLPDIGFDGT ITRGRAEFVVGADANFNGNTVRLDILPHPSITQESGSITLTDNFAFGQKYEGVGKLGAGA QAPAPAPDNPPKPDAGEHTGTCADKVVLDRGHVDIAVTRDGDEFLTRLKDETALVDKKTV ERPLDDVVLAVHDNALRSRPAALKGKDFDYLGKEKFFLLPQTQEQSIIWPGYNTQALNYK DYKDGKVTLNIKPVEMPEGAQVGLFTTEGFGNVFTQLINSAEGDYSIETTFASHTHTNWA FTKPGIYKLEVTYSATTTEGKDISSAPQTLTVAAGDAAIKDCVKSKEGKEGEDTPKPGNE KPGDKPGDKKPGDNQPGGQKDKTSSLPKLEGLWGLVLPVVLAIIFQGFLNFYNDHRDQIA ARFTGLLPR >gi|227860915|gb|ACLH01000005.1| GENE 82 87079 - 88182 658 367 aa, chain + ## HITS:1 COG:no KEGG:cauri_1145 NR:ns ## KEGG: cauri_1145 # Name: sapD # Def: putative surface-anchored protein # Organism: C.aurimucosum # Pathway: not_defined # 1 367 1 367 367 594 100.0 1e-168 MHSTPSRAAQGLNVRQNSALLKASAAVFTIVAALFVAVLGSPAAARADSELIESGHVDAF YVSAPGGQLTLSMKEDVTGSGVVRPGNDVILKVAEKAWSEATERIDGIAMPTYYLPQTQD SSLLWPGWDTQAAQSAGYKDVNFEFVEVTGPGDIFIFETAGFGDIQPVTNAGELDLVSGD VINQAYPAHRHVNWAFSEPGIYTMTVQAESNGDTSNQVTYTWDVGDGDAAPQESGDEEPA TDNGDDGTEEHHEAELGDASPEQPASSASGTRSGGGNAGGGTRAAGTRNAKQQASSKERK ERGERKERKPSHRSTGAADGENVDTVAAAGYYDSGQNLLPWGIGILGLGMLVLGLALARL ALMKGRD >gi|227860915|gb|ACLH01000005.1| GENE 83 88365 - 89681 1012 438 aa, chain + ## HITS:1 COG:BH0516 KEGG:ns NR:ns ## COG: BH0516 COG0803 # Protein_GI_number: 15613079 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus halodurans # 260 425 127 294 300 85 30.0 2e-16 MTTLIPAGKDPHTFEPSLRSVRDIANADVLLSNGFLLEPQNLLKSLRESSDVPVTEVADQ ASTRGAKLVPLVENVALDAVWLGLRVRNAAPGTTSVDMRLLDVEGPGDVAAYVVSTFGTP EPLFNSADGIDQHNDSTTLPANAHTHVSWTFNKPGIYRLSFGATDSSPQEFTVAVGVSTP AGMRALDAGHVDITADMATGKLDLEDQGESFDPNTTVLSIPNSALQQIPPDPSYRFLGRP GDETYLLPQAVLGKHIHGEVDPHLWHNAANVISFTEVIAEQLAQTDPSHGAAYRARAQDY IAQLRDVDAEVRQLISAIPERNRHLVTPHHGYAYLEQGYGIDIAGFVSPNPAIEPSPRDV IALRRTLENLQLPAVFVEPTQQASADVIREAADSLGVAVCPIYGDTLDDAVPTYLGLMRF NAHSLNRCLGSTTKESHV >gi|227860915|gb|ACLH01000005.1| GENE 84 89674 - 90573 727 299 aa, chain + ## HITS:1 COG:no KEGG:DIP0439 NR:ns ## KEGG: DIP0439 # Name: not_defined # Def: hypothetical protein # Organism: C.diphtheriae # Pathway: not_defined # 13 268 4 260 298 226 48.0 7e-58 MSNRTLRIFTMPLAAALSAAALAFAPSAAWAGDLAQVVSSDEEVAAPGTAAAIDHGHVDL GLLLNEGQAEFLARDDSAETPVWRQPDDVVFQVGDNALLTLPEDKAFSFVGAEPGSQVWV VPQTEQADVPWLGWNTQAPSLEENVERGVTMEFLGHQGPGEFSLFLQNGGFEEPQLLWST ATGDSEGFWVDLGTHTHANWVFTEPGIHQVRVRMSGEGAGDSAGTEVAAEATLTFAVGDD TDVAQAQATEWDPNADSSADSASASASVPVWIWALAGVGVLVLIGAIIAVVRAKGGQRD >gi|227860915|gb|ACLH01000005.1| GENE 85 90566 - 91294 252 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 16 240 16 250 311 101 30 1e-20 MTSPFISVTDLSVSLSGRRVIDAANLTVRPGEFIGLLGPNGAGKTTLMRAILGLIPFTGS IDVTTSLGYVPQRHDVEWDFPISVSKAVLSGRTGLVGWFRRAGRADKEAARRAIELTNLE EFARRPIAQLSGGQRQRVLIARALACEPEVLLLDEPFTGLDAPNTEELLLLFDKLTADGT SVVMSTHNLSEAAHSCSRLVLFNRGIIADGPAETLRMNSQPWSDTFGVSASSPLLSAIGV AA >gi|227860915|gb|ACLH01000005.1| GENE 86 91291 - 92187 974 298 aa, chain + ## HITS:1 COG:DR2283 KEGG:ns NR:ns ## COG: DR2283 COG1108 # Protein_GI_number: 15807274 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Deinococcus radiodurans # 13 270 4 262 268 157 43.0 3e-38 MIDISLIEFFQDLTNPHLDFLARAVGISILAAIVCGVVGCYVVLRGMSFIGDAVSHAVFP GLAIAFVLQGSVLLGGAVAGCTVAVLIACFSQRRTVREDSVIGIFFAAAFALGMVIISRV DGYTASLTSFLFGSLTGVSRADLYTAFTVTVLIVATVLLLGPQLTATCLDKETARAMGLP VFALDIVLYLCVTGAVVISVGTIGNVLVLALLITPAATARLLCDSLGSMMIAAAAIGSMG SFFGIYLAWAIDLPAGATIVLLLTACFLVAWVLSPLVHSRRASASTSTSHTPKETLSA >gi|227860915|gb|ACLH01000005.1| GENE 87 92184 - 93527 942 447 aa, chain + ## HITS:1 COG:no KEGG:cauri_1141 NR:ns ## KEGG: cauri_1141 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 447 1 447 447 746 100.0 0 MNILSMTRINYRPLALTAAAALALSSPTLILTAPPAIAAEQASDTSCDADSLHAFSRGHQ DLALVGDSGALSFIARDDESGKDYASGEFYVEVGSNAAFDESAGSDIPSSGWQIPQTQDP NIPWLGFNTSYLDEATAADATLSLTLHSGPEGGRMVGFQNSLGADPTVLFDSENPDITWD YPDHFHSHTGIIFSEPGAYAATFTFTLNDGSEHSIDVPFLVGGADTSELCQLKWGSGEGG SGGSGSPKNRPQQLAKDINDTSKAIAQLDKTMDKTFKEADTFFKGGKPSDAKNAKEEKNT ERSTRASARKETKPQKETGSKEPTAANSATAQGRSPAPNATAHTAQGQRDSAQRGTPRSS SAADAKDSTRSAASNRERNARKEAAAQRPTSDAPEQYADGENIQAMSYGAPMVGFWAGFL AGMGSLALLLGIGLFIAVQFFRPRKRD >gi|227860915|gb|ACLH01000005.1| GENE 88 93608 - 94711 987 367 aa, chain + ## HITS:1 COG:Cgl1262 KEGG:ns NR:ns ## COG: Cgl1262 COG1169 # Protein_GI_number: 19552512 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Corynebacterium glutamicum # 6 367 10 376 376 466 68.0 1e-131 MCENRPSTAPDFLLSRATGSVRTQGSVATFSDVNAAVSALRSGTAPMVVGALPFHKGDPA ALTVPRSIIREEGPLEPHAYYRSGTLNARVTGFDPEPEEHLRRIEAAIATIEASKLDKVV LARAVDIEFNAPVDPLLVAARLIDLSSHRDGFIADLTPAGRPGAMFVGSSPEVLIKKQGS TVTAFPLAGSAPRQADKARDIKAGQDLHNSAKDLREHAFVVDHIRRILQPLCETLDAPTA PQLTSTNEMWHLGTPIAGTLKDSDITALELAELVYPTPAICGTPTEAAQALIETAETDRG FYAGAVGWCDDSGDGEYMVAIRCAEVAGDGLSARAWAGGGIVVDSDPTAELQETTAKLRT ILRALNL >gi|227860915|gb|ACLH01000005.1| GENE 89 94720 - 95538 989 272 aa, chain - ## HITS:1 COG:Cgl1260 KEGG:ns NR:ns ## COG: Cgl1260 COG0179 # Protein_GI_number: 19552510 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Corynebacterium glutamicum # 4 269 1 265 268 355 68.0 4e-98 MAVMRLGRIAHTEGICFAIIDGPADAPLDQLVAKEISGTPFTPPEPTGREWPLSEVRLLA PTLPTKVVALGRNYADHVAEVFKESAEHLPPTIFIKPSTAVIGPGAPIKIPEFATNVEFE GELAVVISKVSKNIDPEKWRDHVVGYTICNDVSSRDLQFQDGQWARAKGIDTFCPLGPWI ETDLDCINLDDQKINAYLTHDGKREQKQDSNTDQMIVKMGHIIAEISQSYTLLPGDVITT GSPAGTAPMVPGDTIEIEIPGVGSLANPIERA >gi|227860915|gb|ACLH01000005.1| GENE 90 95664 - 96281 571 205 aa, chain - ## HITS:1 COG:Cgl1259 KEGG:ns NR:ns ## COG: Cgl1259 COG0847 # Protein_GI_number: 19552509 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Corynebacterium glutamicum # 14 202 25 216 218 223 60.0 2e-58 MWSPWSRRADWGAPGLSTPLDDLNLLAVDMETTSLDPRRGKIVSIGWVPVNGGVIDLSGA GYTVVRGAQVAEDAHVHLLTQEVIDAGEELDSAVAQLRQALQGRALLAHFAALEVGFIEA ASREVFGQRPRLSVVDTFALERRHMERMGTYPRGEDLRLPRVRARYGLPRYGSHNALSDA LACAELYLAQRGRTRAVTLGDVAQR >gi|227860915|gb|ACLH01000005.1| GENE 91 96282 - 98150 1043 622 aa, chain - ## HITS:1 COG:Cgl1258 KEGG:ns NR:ns ## COG: Cgl1258 COG2905 # Protein_GI_number: 19552508 # Func_class: T Signal transduction mechanisms # Function: Predicted signal-transduction protein containing cAMP-binding and CBS domains # Organism: Corynebacterium glutamicum # 1 622 5 622 622 691 57.0 0 MSVEIDEVTSFLAQHEPFSRLPEEELTALSSQLSMIYLRRGDIPIKMGEENAHLHIIRTG AIDVVGEDNVLLDRRESGLTFGYSTLQGEPVSAYEMVAVEDSLVFTLEQEAFSQLAERNP DIARFFSAQSRQIRAAARELTDSAPTDVLRTPLRELIRTDVLTAPAATTIREAALLMTEH GVSSLLVVESGEETDKRLTGILTDRDLRTRVLAAQRDPAAPVGEIMTPQPLTVSADAPAM EALLHMAERGIHHLPVVKEGALQGIVTQSDVTRLLHNDPVYLAADLSRRSSVAELNGAFN EATRLAGRFVERGSTPAEASSLVTLAADAVARRLCTLAEEELGPPPVEYAFVAVGSQGRR EMALASDQDNALVLADDFDAAEYGEYFARLSSFVCQGLADAGQVLCPGDMMAMTAQWRMT RSQWIDTFRRWIRDPQPKALLNAQIFFDFRVLYGSEALGRDVHTAAVEMGQGATRLHAHL ASLAARREPPLTLFRGLVVERDGDYANTLDIKKGGTAGIVQMARLFALASGSTVVDTRQR LREAAGNAVSRQGAQELLDAFDYLRSLSFQHQARQLREGQQPDYHIDPKGLGRMEREHLR DAFRAIKSMQNALATKYPVRNI >gi|227860915|gb|ACLH01000005.1| GENE 92 98168 - 99187 1221 339 aa, chain - ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 1 339 1 340 340 521 80.0 1e-148 MKLAVIGGDGIGPEVTAEALKVLRAVRQDVEVTDYDLGARRYLRNGELLSDADFASLREH DAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYPTSTSPLANPGDIDFVV VREGTEGLYCGNGGTLREGTEHEVASEVSQNTRFGVERVVRDAFQRAMGRRKHVTLVHKT NVLVNAGGLWQRTVNEVAQEFPEVTVDYNHIDAATIYMVTDPARYDVIVTDNLFGDILTD LAGAVTGGIGLAASGNIDASGANPSMFEPVHGSAPDIAGKGIADPTAAILSAAMLLRHLG DEENAVRIEEAVAADVSARGDAQARTTEIGDRIAAALSA >gi|227860915|gb|ACLH01000005.1| GENE 93 99323 - 100909 1793 528 aa, chain - ## HITS:1 COG:Cgl1254 KEGG:ns NR:ns ## COG: Cgl1254 COG0111 # Protein_GI_number: 19552504 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Corynebacterium glutamicum # 3 527 6 530 530 724 77.0 0 MSKPVVLIADKLAESTVDALGDTVEVRWVDGPNRAELLAAVPEADALLVRSATTVDAEVL AAAENLKIVGRAGVGLDNVDIPAATERGVMVVNAPTSNIHSACEQAIALLLATARQVPAA DQSLRQGEWKRSSFKGVEIYGKTIGIVGFGHIGQLFAQRLLAFETTVIAHDPYANPARAA ALGVELVSLEELMSRSDFVTIHLPKTPETAGMFDAELLAKAKKGQIIINAARGGLVDEAA LAESIKSGHHRGAGFDVYASEPCTDSPLFELPQVTVSPHLGASTVEAQDRAGTDVAASVL KALAGEFVADAVNVEGGKVGEEVSGWLDLTRKLGLVAGNLLGAAPVAIEVEACGELANEE VSALGLSAVRGVFSGVVSETVTFVNAMKIAASRGVTVDVKTNVESKGHRSSVRVKVIGPN GKVSQLTGALTGIDGVEKIIRINGRGVDMRATGRNLFFSYKDAPGALGTVGTKLGAAGIN IVAAALTQGKDASDAVLILRVEREVPEELVDEINAALGATCRQLVLNA >gi|227860915|gb|ACLH01000005.1| GENE 94 100954 - 101829 493 291 aa, chain - ## HITS:1 COG:no KEGG:cauri_1134 NR:ns ## KEGG: cauri_1134 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 291 4 294 294 553 99.0 1e-156 MLLLGMTALGVVGCSSLGRGEPVLTQDITALPESEIDLARASEENRLRLIDPQFANEVTV VGDRWGIDSARLFFKESNTLILAEETDAAALRAATLSVSQRVPMVTYDASIRPQISQLLN DLDVDQILVIGNVPWARQNGQREVIHDPGNTKALGEYTAFRFDSKVVMNRERMVDNIARL DSSTKTELKAAWEPLPQHLTKEKMPAIPAQARRDAQMAPVIVATKDSPLANVVNATAYGG TVFVMEDPDPTATKAGAAITAGLSDGPIVALGPEFGSVTEFTHKITQGWKE >gi|227860915|gb|ACLH01000005.1| GENE 95 101867 - 103660 1549 597 aa, chain - ## HITS:1 COG:Cgl1252_2 KEGG:ns NR:ns ## COG: Cgl1252_2 COG3472 # Protein_GI_number: 19552502 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 237 596 1 364 369 413 56.0 1e-115 MGFSTPSYDLNDLFARIDRGDIQLPDFQRSYAWDEDRIRSLIVTVLRGYPLGAFMALDTR NEAMRFRPRPLAGAPNTGVNPGLLLLDGQQRLTTLYHCFRGEGFVDTTDFRSKKVSRKYF VDLHKATSEDIMPDEAVFAINQHGELRSHFAPDLDDSLNSREAAVQACCIPVSALLSEEG TSMLFELAAANDGANRDVVAAFNNRILRPLSGYTVPMIRLSRETASAGIGSIFAQVNSAG LQMDVFDLLTAVFASEDPDFHLAEDWAGVEKQLRAFPALDGIGRNEFLSAVSLLVSGEKG NAGGQREDILQLSLAEYRKASQTLVITFREVAEFLAERCILSLEQVPYSEQIIPLAVILA RLAEKKGVLSSQDAWDRLNQWFWSGVFGELYGSSAVKLRAARDVDEVTAWVAGDTEDVPK TVRDASFRESRLFSVGEHDGVWHGLYALLMARGAKDWRTGRPFNRHSFEELQPGFFPVFP LRWCERHGVSGVLANSVLNRTPMGKRTEVVIDGHSPERYLPRVQSKSIMEDAEFDSVLAS HELEPELLTAKTVHQFFADRRERFVGIVEYALNKQVVRDVDEANLSGGEEGPQAFAR >gi|227860915|gb|ACLH01000005.1| GENE 96 103773 - 104786 1637 337 aa, chain - ## HITS:1 COG:Cgl1243 KEGG:ns NR:ns ## COG: Cgl1243 COG0059 # Protein_GI_number: 19552493 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Corynebacterium glutamicum # 1 337 1 335 338 521 81.0 1e-148 MAIETLYDSDADLTIIQGRKVAIIGYGSQGHAHAMNLRDSGVEVAIGLREGSKSREKAEE AGFKVLTNAEAAKWADVIMLLAPDTSQAAIFTEDIEPNLEDGNALFFGHGLNIHFGLIKP AENITIGMVAPKGPGHLVRRQFVDGKGVPCLIATEQDPKGEGRELTLSYAAAIGGARAGV IPTTFKDETETDLFGEQAVLCGGVEYLIMNGFEVLTEAGYEPEMAYFEVCHELKLIVDLI VEGGIKNMNYSCSDTAEFGGYLSGPRVIDASVKERMKDVLTDIQDGTFVKRLVANVEGGN KELEDLRAKVNSHPIEQTGSQLRDLMSWVKNPLDATA >gi|227860915|gb|ACLH01000005.1| GENE 97 104898 - 105413 622 171 aa, chain - ## HITS:1 COG:Cgl1242 KEGG:ns NR:ns ## COG: Cgl1242 COG0440 # Protein_GI_number: 19552492 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Corynebacterium glutamicum # 1 171 1 171 172 239 76.0 3e-63 MAKDDITRHILSVRVQDIEGIISRVTGMFTRRGYNLISLVSARTETEGINRLTIVVDASE VVIEQVTKQLNKIVPVLKVVELEEENTIARAIMLVKVAADNSNRPQVVDAVNIFRARIVD VSPESVVVEATGTPGKLQALLDVLEPFGIRELVQSGNVALGRGPKAMAPSK >gi|227860915|gb|ACLH01000005.1| GENE 98 105419 - 107239 1895 606 aa, chain - ## HITS:1 COG:Cgl1241 KEGG:ns NR:ns ## COG: Cgl1241 COG0028 # Protein_GI_number: 19552491 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Corynebacterium glutamicum # 3 605 15 616 626 881 73.0 0 MTASTPPQRAPERITGAHAIVRTLEDLGTELVFGIPGGAVLPLYDALFESTKLRHVLTRH EQGAGHAAEGYAQASGKVGVMIATSGPGATNLVTPLADANLDSVPVVAITGQVGSSLLGT DAFQEADIRGVTMPITKHNFIVTKAEDIPSAIAAAFHLASSGRPGPVLVDIPKDVQNALM EYSGPVMPDLPGYKPTTTPHPRQITQAVQRIARAERPVLYVGGGVIKAEASRELREFAEL TGIPVVTTLMALGAFPDKHPQHMGMPGMHGTVPAVAALQRADLIIAVGARFDDRVTGDTD TFAPHAEVIHADIDPAEIGKIREVAVPIVGDAREVLLRLTKAYANDAELDAPRIGPWMEY LGDLQSRFPRGFEPTADGLLNPQEVIQQLSAIVGPEAIYCAGVGQHQMWSAQFLDFEQPR SWINSGGAGTMGYAVPAALGAKAACPEREVWAIDGDGCFQMTNQELTTAAVEGFPVKVAV INNGNLGMVRQWQTLFYENKYSHTKLREHDEYVPDFVKLSEALGCESIRVTTAEEIGPAI ERARSINDRPVVIDFIVGQDAQVWPMIGGGASNEEIQYALGLRPLFDENESAAEEPADIH ESLEEA >gi|227860915|gb|ACLH01000005.1| GENE 99 107555 - 108088 573 177 aa, chain + ## HITS:1 COG:no KEGG:cauri_1129 NR:ns ## KEGG: cauri_1129 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 177 1 177 177 361 100.0 8e-99 MTSSHPQNASSRAEHPTAETFKPTREHLLGIGILAAIAFLSIGWAPKYLFWILIFPVLAI WWVLRARTTVDSTGIHITYGFRGPKHIEWKDFQGIGFQRSKAYARTTKGDNFNLPGVTFN SLPRLAAASNGRIPDALSAGRDAADDKVVIVHRDGQQILLTKEEYAEYLEKHPELKD >gi|227860915|gb|ACLH01000005.1| GENE 100 108091 - 109944 2271 617 aa, chain + ## HITS:1 COG:Cgl1238 KEGG:ns NR:ns ## COG: Cgl1238 COG0129 # Protein_GI_number: 19552488 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Corynebacterium glutamicum # 1 613 1 613 613 972 79.0 0 MYPLRSKVTTVGRQASGARALWRATGSKESDFGKPIVAIANSFTQFVPGHVHLKNVGDIV ADAVREAGGVPKEFNTIAVDDGIAMGHSGMLYSLPSREIISDSIEYMVNAHTADALVCIS NCDKITPGMLNAALRLNIPTIFVSGGPMEAGKAVVVDGVAHAPTDLITAITASASDAVSD EGLTRVEESACPTCGSCSGMFTANSMNCLTEALGLALPGNGTTLATHSARRDLFEQAGRT IVDLCRRYYGEEDDAVLPRSIATKEAFSNAMALDMAMGGSTNTILHTLAAAQEGEVDFTL EDINEISYRVPCLSKVAPNGTYHIEDVHRAGGIPAILGELRRAGHLNLKVHTALYDNAEE WLDDWDIRGGKATEAALELFHAAPGGVRTTEPFSQSNRWDELDTDAANGCIHDAERAFSS DGGLVVLRGNLAPNGAIVKAAGVEEELWTFTGPARVVESQEEAVSIILKKEVQPGDVIVI RYEGPAGGPGMQEMLHPTSFLKGSGLGKACALITDGRFSGGTSGLSIGHISPEAAHGGLI GLVENGDPITINIRERQLTLDVDEEVLERRRATEEQREKPWTPKERNRPVTKALRAYANM ATSADRGAVRVVDGYVN >gi|227860915|gb|ACLH01000005.1| GENE 101 109956 - 111224 1391 422 aa, chain + ## HITS:1 COG:no KEGG:cauri_1127 NR:ns ## KEGG: cauri_1127 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 422 1 422 422 759 100.0 0 MNFATNAARRTLLTAAGLIVGLVGVIRHVLHTDFPVDMIIYREGVRAFMEGRSVYSEPMY AGDLALPFIYPPFGALVMVPLTAFDWMSDSLAGDIMIVLSDGLVFACLYAIFRALKVPHL WPTVAIAWAAAMFFEPIRLNNGFAQINIVIMALVIFDLIPRKRKLPQGWLIGLAAAIKIT PLAMLLYFLLRREWKPILTAFASAVLATLLAAVYRWEAFVEFFTSKLLDMGKGADFGVAT DYQSNSSLKGVIQRLFTSQEAMDNHGTLINMLWLVAALTVIGLGSALILVQMRRGLLVDA HLTTATTMLLISPVSWSHHWVWLSLIVPVLVYRAWSWRNSTWVAGSLLAVLAAWAGMLLT VPPKWWFGDSIDVHVMPLYQKFLVDDFVWLALLSWILYAICLKVQGIPTDKPQTELATAP AS >gi|227860915|gb|ACLH01000005.1| GENE 102 111335 - 111649 436 104 aa, chain - ## HITS:1 COG:CC3387 KEGG:ns NR:ns ## COG: CC3387 COG1846 # Protein_GI_number: 16127617 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 4 104 5 94 98 65 36.0 3e-11 MSDLDPIIHPLNRFKICATLNAFGATQGGEVNREMKFAMLRDRTELSDATLSKQLGALEQ AGYVTRFREYGTSRAKDSVWVALTEQGKIAFDGHLAALKALAEG >gi|227860915|gb|ACLH01000005.1| GENE 103 111646 - 111888 151 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262182564|ref|ZP_06041985.1| ## NR: gi|262182564|ref|ZP_06041985.1| hypothetical protein CaurA7_01089 [Corynebacterium aurimucosum ATCC 700975] # 1 80 2 81 81 154 98.0 2e-36 MALALYYRKGVRDSMRQKVDPHASRSITWRYFAGLGFMILPALFNPFVEGHIVASCVAGV LCSLAAFWMLHTGALNRMSR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:00:03 2011 Seq name: gi|227860914|gb|ACLH01000006.1| Corynebacterium aurimucosum ATCC 700975 contig00006, whole genome shotgun sequence Length of sequence - 71483 bp Number of predicted genes - 73, with homology - 71 Number of transcription units - 27, operones - 17 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 185 149 ## cauri_1124 hypothetical protein - Term 204 - 267 11.2 2 2 Op 1 . - CDS 318 - 1313 1120 ## COG2259 Predicted membrane protein 3 2 Op 2 . - CDS 1342 - 2226 788 ## COG0583 Transcriptional regulator + Prom 2185 - 2244 2.8 4 3 Tu 1 . + CDS 2297 - 2986 905 ## COG1279 Lysine efflux permease + Term 3020 - 3056 -0.0 5 4 Tu 1 . - CDS 2983 - 4407 1789 ## COG3949 Uncharacterized membrane protein - Prom 4452 - 4511 3.3 - Term 4456 - 4493 3.1 6 5 Op 1 . - CDS 4593 - 5648 1072 ## COG1064 Zn-dependent alcohol dehydrogenases 7 5 Op 2 . - CDS 5704 - 7209 2136 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 8 5 Op 3 . - CDS 7253 - 8851 1592 ## COG2985 Predicted permease 9 5 Op 4 . - CDS 8889 - 9920 1306 ## COG0205 6-phosphofructokinase 10 5 Op 5 . - CDS 9931 - 11340 961 ## COG0477 Permeases of the major facilitator superfamily 11 6 Tu 1 . + CDS 11368 - 11691 355 ## cauri_1114 hypothetical protein + Term 11702 - 11749 12.0 + Prom 11830 - 11889 3.0 12 7 Op 1 . + CDS 11909 - 12148 254 ## cauri_1518 hypothetical protein 13 7 Op 2 . + CDS 12208 - 13197 803 ## cauri_1112 hypothetical protein - Term 13274 - 13321 10.0 14 8 Op 1 31/0.000 - CDS 13353 - 14837 2138 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 15 8 Op 2 . - CDS 14840 - 15142 385 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit + Prom 15229 - 15288 3.5 16 9 Tu 1 . + CDS 15353 - 16012 668 ## cauri_1109 hypothetical protein - Term 15730 - 15770 -0.6 17 10 Op 1 . - CDS 16019 - 16777 724 ## cauri_1108 HMP-PP phosphatase (EC:3.6.1.-) 18 10 Op 2 . - CDS 16774 - 17544 589 ## cauri_1107 putative hydrolase 19 10 Op 3 . - CDS 17541 - 19565 2176 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 20 11 Op 1 . + CDS 19693 - 20364 924 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 21 11 Op 2 1/0.444 + CDS 20428 - 20943 424 ## COG0640 Predicted transcriptional regulators 22 11 Op 3 . + CDS 20943 - 21941 787 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 23 11 Op 4 . + CDS 21951 - 22211 202 ## cauri_1102 hypothetical protein 24 11 Op 5 . + CDS 22221 - 22499 289 ## cauri_1101 hypothetical protein 25 11 Op 6 . + CDS 22496 - 22891 250 ## cauri_1100 hypothetical protein 26 11 Op 7 . + CDS 22964 - 23173 264 ## cgR_1315 hypothetical protein 27 11 Op 8 . + CDS 23180 - 24094 808 ## jk1323 hypothetical protein - Term 23936 - 23978 -0.8 28 12 Op 1 . - CDS 24091 - 24999 875 ## cauri_1097 hypothetical protein 29 12 Op 2 . - CDS 25000 - 26085 1239 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 30 13 Tu 1 . + CDS 26190 - 27032 751 ## COG0421 Spermidine synthase + Term 27252 - 27289 0.4 31 14 Op 1 . - CDS 27029 - 28183 1401 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 32 14 Op 2 . - CDS 28180 - 28296 58 ## + Prom 28257 - 28316 2.9 33 15 Tu 1 . + CDS 28382 - 28777 366 ## cauri_1093 hypothetical protein 34 16 Op 1 3/0.111 - CDS 28789 - 31212 2239 ## COG2898 Uncharacterized conserved protein 35 16 Op 2 . - CDS 31181 - 32434 1202 ## COG0627 Predicted esterase 36 16 Op 3 2/0.111 - CDS 32525 - 33661 1116 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 37 16 Op 4 29/0.000 - CDS 33661 - 34620 1383 ## COG2025 Electron transfer flavoprotein, alpha subunit 38 16 Op 5 1/0.444 - CDS 34632 - 35432 1140 ## COG2086 Electron transfer flavoprotein, beta subunit 39 16 Op 6 2/0.111 - CDS 35467 - 36618 905 ## COG0500 SAM-dependent methyltransferases 40 16 Op 7 3/0.111 - CDS 36639 - 37466 974 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 41 16 Op 8 . - CDS 37562 - 38410 205 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 38450 - 38509 2.0 + Prom 38373 - 38432 2.2 42 17 Tu 1 4/0.111 + CDS 38462 - 40474 2306 ## COG0366 Glycosidases + Term 40489 - 40549 14.2 43 18 Tu 1 . + CDS 40581 - 42701 2495 ## COG0296 1,4-alpha-glucan branching enzyme - Term 42572 - 42605 -0.9 44 19 Op 1 . - CDS 42793 - 43191 350 ## COG0394 Protein-tyrosine-phosphatase 45 19 Op 2 . - CDS 43239 - 44816 2254 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 44839 - 44898 2.3 - Term 44901 - 44950 -0.9 46 20 Op 1 1/0.444 - CDS 45022 - 45945 1124 ## COG3118 Thioredoxin domain-containing protein 47 20 Op 2 . - CDS 45942 - 46250 369 ## COG0011 Uncharacterized conserved protein 48 21 Tu 1 . + CDS 46249 - 46473 85 ## + Term 46620 - 46661 -0.8 49 22 Op 1 . - CDS 46545 - 47237 802 ## COG1637 Predicted nuclease of the RecB family 50 22 Op 2 . - CDS 47261 - 47746 340 ## cauri_1076 hypothetical protein - Prom 47779 - 47838 3.0 - Term 47826 - 47874 6.1 51 23 Op 1 42/0.000 - CDS 47933 - 48301 495 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 52 23 Op 2 42/0.000 - CDS 48312 - 49760 1995 ## COG0055 F0F1-type ATP synthase, beta subunit 53 23 Op 3 42/0.000 - CDS 49764 - 50747 1220 ## COG0224 F0F1-type ATP synthase, gamma subunit 54 23 Op 4 41/0.000 - CDS 50804 - 52444 2178 ## COG0056 F0F1-type ATP synthase, alpha subunit 55 23 Op 5 38/0.000 - CDS 52505 - 53320 1049 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 56 23 Op 6 37/0.000 - CDS 53327 - 53899 825 ## COG0711 F0F1-type ATP synthase, subunit b 57 23 Op 7 40/0.000 - CDS 53945 - 54187 454 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 58 23 Op 8 . - CDS 54285 - 55097 791 ## COG0356 F0F1-type ATP synthase, subunit a - Prom 55226 - 55285 2.0 - Term 55477 - 55521 8.1 59 24 Op 1 . - CDS 55544 - 55978 469 ## cauri_1067 hypothetical protein 60 24 Op 2 4/0.111 - CDS 55995 - 57170 888 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 61 24 Op 3 10/0.000 - CDS 57181 - 57858 782 ## COG0009 Putative translation factor (SUA5) 62 24 Op 4 32/0.000 - CDS 57912 - 58796 184 ## PROTEIN SUPPORTED gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase 63 24 Op 5 1/0.444 - CDS 58821 - 59897 1594 ## COG0216 Protein chain release factor A 64 24 Op 6 . - CDS 59897 - 61837 2455 ## COG1158 Transcription termination factor 65 25 Op 1 . + CDS 62305 - 64059 1917 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 66 25 Op 2 1/0.444 + CDS 64109 - 65248 954 ## COG2896 Molybdenum cofactor biosynthesis enzyme 67 25 Op 3 5/0.000 + CDS 65259 - 66476 867 ## COG0303 Molybdopterin biosynthesis enzyme 68 25 Op 4 . + CDS 66602 - 67087 509 ## COG0315 Molybdenum cofactor biosynthesis enzyme 69 25 Op 5 . + CDS 67094 - 67660 528 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 70 26 Op 1 . - CDS 67647 - 69026 1360 ## COG2132 Putative multicopper oxidases 71 26 Op 2 . - CDS 69007 - 70206 969 ## cauri_1055 hypothetical protein - Prom 70228 - 70287 6.1 + Prom 70184 - 70243 6.5 72 27 Op 1 . + CDS 70301 - 70561 309 ## cauri_1054 hypothetical protein 73 27 Op 2 . + CDS 70584 - 71306 763 ## COG0725 ABC-type molybdate transport system, periplasmic component Predicted protein(s) >gi|227860914|gb|ACLH01000006.1| GENE 1 2 - 185 149 61 aa, chain - ## HITS:1 COG:no KEGG:cauri_1124 NR:ns ## KEGG: cauri_1124 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 61 1 61 71 112 100.0 7e-24 MSEQDVRDALAFEEQQQVAAAKRPPIWLSLFASAAYGVWFAYMWIKDDVHPIVPISGLVL V >gi|227860914|gb|ACLH01000006.1| GENE 2 318 - 1313 1120 331 aa, chain - ## HITS:1 COG:Cgl1237 KEGG:ns NR:ns ## COG: Cgl1237 COG2259 # Protein_GI_number: 19552487 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 11 331 19 352 352 179 37.0 6e-45 MSDKTPDKATDFDDDIPTYTGKDSVKDSTPEAEPVEAADKPKKSSLFQRPGRAEPQVIKP KKAEEPAVEAEPEVKTETFESASRDSLSFDSAAAETETTAFPRAEAMAEPDAQTTAMPVS ATATESTATETYEEVPSTVAVADPAVDSEVAAVEKKPEPARRGTIDFGLLFVRLVLSVYL LVAGASTFFKLGGNEGLSGLEKEFGEYTMAAALAIGVPTVQLIAGAFLLLGLVTPLAAMF GLIVTGFSAIHGLNASGAGLDVFAWNESVWLGLVLFVIAVALQFTGPGFISLDFNRSWTR RPLATSWIFIVIGVAALVAIWWFGAGVNPLS >gi|227860914|gb|ACLH01000006.1| GENE 3 1342 - 2226 788 294 aa, chain - ## HITS:1 COG:Cgl1234 KEGG:ns NR:ns ## COG: Cgl1234 COG0583 # Protein_GI_number: 19552484 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 280 1 284 290 300 55.0 3e-81 MNPLHTETLLAIIDEGSFEGAATVLGITPSAVSQRIKALEVSTGRILLRRGTPVTVTEAG EIVAQAARRMALVQAEADARLTERLSRVPLTVAINSDSLATWFRPVIQQTAQRGEAALRI RIEDEARTLAMLRRGDVLGAVTREQTPVSGCESTYLGTMRYFAVAAPALAETFEDWETLP IVGFGPNDATLDDAMRERFIDSHVLRARVSQIPSSESYVEAVRYGLGWGLVPRLQAQPLL ETGELVLLDDFPLDIDLYWQRWRLESEVLADLTADVLDAGRAVLATRRADKDAP >gi|227860914|gb|ACLH01000006.1| GENE 4 2297 - 2986 905 229 aa, chain + ## HITS:1 COG:Cgl1233 KEGG:ns NR:ns ## COG: Cgl1233 COG1279 # Protein_GI_number: 19552483 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Corynebacterium glutamicum # 1 229 4 235 236 165 43.0 8e-41 MSVLLAGFALGLSLIIAIGPQNAYIIKMGIKRDHVGPILLACLLSDVILITGGTAGVGVL VERFPTALVVVKYLGAAYLIYFGFTCFRDAFKKQQDALVIEETTPVAQVVDENSGNAGAP GTSVLTKIRPRVRSKSWVKPVLGALALTWLNPLAYVDALVMLGSIANQYGDQRWVFAGGA ILASAVWFPSLGFGAYKLSHVLAKPTTWRVVNIVIGCVMLALTAKLLFL >gi|227860914|gb|ACLH01000006.1| GENE 5 2983 - 4407 1789 474 aa, chain - ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 6 398 5 394 400 352 47.0 8e-97 MSYKNVVGIALSFIGLLVGAGFATGQEVVQYFTSFGIPGMWGILVAGLVMTLAGTVFLQL GSYFHASEHNQVFRNITHPIISRILDVAVILTLFAVGFVMLAGAGSNMQQQFGWPAWVGS LLMLVMVLITGMFDVDKVSQVIGLLTPTIIIAVLFVGIYTLLHMPENVDAAITASAAIES PIPNWLISALNYNGLALILAVSMSLVIGGDNISPREAGVGGIVGGAVYAVLMAIAGFSLL MNAENVGDSDIPMLTLVDNVHPTLGVIMAIIIYLMIFNTAIGMFYALGKRLSSGNESKYR IIFIAGCLAGFAVSFAGFKSLMQYVYPVLGYMGIVLVAILVVGWMRSLGKIKDEGLRRER IRALLHLKLHPDSEYDAARYDDEIGQQIADSNMDDEALFEDLVSDVVEELDSDEELDFDR EEWEENRNDHSYYTEREAVEQDRSDEEIKAWVEETGAVGDPAEDEELPEESTKN >gi|227860914|gb|ACLH01000006.1| GENE 6 4593 - 5648 1072 351 aa, chain - ## HITS:1 COG:Cgl0330 KEGG:ns NR:ns ## COG: Cgl0330 COG1064 # Protein_GI_number: 19551580 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Corynebacterium glutamicum # 1 350 1 349 353 532 78.0 1e-151 MTISTKALQKTGPNEPFEVVTIQRREPRADDVVIDIKAAGICHSDIHTIRNEWGEAHFPL TVGHEIAGVVSAVGEEVTKFKVGDRVGVGCLVNSCGECEQCEAGMEQNCLKGGVGTYNST DVDGTITQGGYAEKIVVNQDFVLRIPDSLDFDVAAPLLCAGITTYSPLARWNVKEGQKVA VVGLGGLGHMGVQIAAAKGADVTVISRTSRKAEEAAKLGASRTLATTEEEDFFRKHRGEF DFILSTISAEYSLEDYLGMLKPRGIMSVVGLPPEALPLRLSRLVGGGKVLTGNNIGGITE TQEILDFCAEHGLGAVIEKVGVDEVDAAYERVVAGDVKFRFVIDTATFAEY >gi|227860914|gb|ACLH01000006.1| GENE 7 5704 - 7209 2136 501 aa, chain - ## HITS:1 COG:Cgl1230 KEGG:ns NR:ns ## COG: Cgl1230 COG0064 # Protein_GI_number: 19552480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Corynebacterium glutamicum # 1 501 1 501 501 843 85.0 0 MTAAMYDLMDYDEVLEKFEPVMGMEVHVELNTETKMFSTSPTNFNAAPNSNVDPVSLGLP GALPVVNSKGVEGAIKIGLALNCKIAESSRFARKNYFYPDQPKNYQISQYDEPIAYDGYL DVVLDDGTEWRVEIERAHMEEDTGKLTHLGGADGRIHGATTSLVDCNRAGIPLIEIVTKP IIGAGERAPEVARAYVSALRELVAALGVSDARMDQGSMRVDSNVSLRPVGQEEFGTRTET KNINSLRSVEQAVRFEMQRQAQVLVDGGEIVQETRHYQETDGSTSKGRPKETAEDYRYFN DPDLPPVIVSREWVEEIRQTLPEMPWIRRARIQEEWGLKDEEMRDLVNAGALDLIIETVE AGTTPDEARSWWVSYLTGKANEAGVELSTLGITPAQVARVVELVKEGKLTTKLARQAVDG VLAGEGDVDEVVAKRGLEVVRDDGAIEKAVDDALAANPDIVEKYKAGNKKVTGAIVGAVM KATQGKADPGQVNKLIAKKLS >gi|227860914|gb|ACLH01000006.1| GENE 8 7253 - 8851 1592 532 aa, chain - ## HITS:1 COG:Cgl2162 KEGG:ns NR:ns ## COG: Cgl2162 COG2985 # Protein_GI_number: 19553412 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 5 531 1 537 539 250 35.0 5e-66 MTSVLAFLADQPVLLVFLLIGLGMALGGIKTRGISLGAAAVLFLGIAFSAAASAAGVEAS VPPILGMFGLVLFAFGIGNNSGVSFFKSLKTATGPVLSMIVVFIIAALAAWGLGTYVFGL SSATIAGTFAGAVTNTPALAAASETTGDPGSATVGYAVSYLFGVIGMLAATVLVLRDAGN DDDTLSPVTRQHMQILRETSVAEIADIGNGEVQVTRLRRVGSNVIVLPKFFDVLHPGDVV TLVGAPEDLDNIIEHAGRESPQILNDDRHELDFRRITVSEHNLAGLTIAELNNQLADRWG ARISRVRRADNDQVAIPEHIVELGDRVRVVGSKKSLREISTFLGDSSQGLTDINPVSLGL GMALGVFVGHLEIPLPGGSSFSLGAAAGVLIVALIMARIGRIGNTVTALPHSANTILSEL GLLLFLAQAGTNAGGEIAGAFTGGAWWKILLLGMIITTLVATGFALVMRRFLRVGATKTA GAMAGAQTQPAVLAFVNNRTNTDQRVALGYAMVYPAAMIAKILITHGITLLG >gi|227860914|gb|ACLH01000006.1| GENE 9 8889 - 9920 1306 343 aa, chain - ## HITS:1 COG:Cgl1221 KEGG:ns NR:ns ## COG: Cgl1221 COG0205 # Protein_GI_number: 19552471 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Corynebacterium glutamicum # 1 343 4 346 346 540 79.0 1e-153 MRLAVLTSGGDCPGLNAVIRAVVRTASNEFGDTVVGYEDGWVGLMEDRRRDLYDDAEIDR ILLRGGTILGTGRLHPDKFKAGLDTIKANMADAEVDALIAIGGEGTLKGAKWLSDNGIPV VGVPKTIDNDVNATDYTFGFDTAVSVATDAIDRLHTTAESHDRILIVEVMGRHVGWIALH AGMAGGAHYTVIPEVPFDIADITKAMERRFQMGEKYGIVCVAEGALPKEGTMDFEEGGVD QFGHQTFNGIGQVIGDEIKKRTGYDVRTTVLGHIQRGGTPTAYDRVLATRYGTHAARAAH NGQSGMCVALHGENIDLVPLEDAVGKLKVVPAKRYANAQALFG >gi|227860914|gb|ACLH01000006.1| GENE 10 9931 - 11340 961 469 aa, chain - ## HITS:1 COG:Cgl1114 KEGG:ns NR:ns ## COG: Cgl1114 COG0477 # Protein_GI_number: 19552364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 13 429 2 417 449 333 45.0 5e-91 MVARLRSMKLAATPISEKQAWLAMAALSLGFFMSLLDQSMIAVALSDVRREFNADVNQVL WVSAIYLLAVVVPLLFTGRLGDIYGQKRMFQLGNGLFGLGALLCALSPSVEFLIAARALQ GLGASIQMPQTMAVINRIFPRERRGRALGAWGVVGSLATLAGPLLGGLVVAAFGWQAVFW IHIPFVIAAIALSGLWVPALPTTPGRVDFVSVWASFIALTCFVFAVQQGPETGWPWWIWA FLAVGVLGMVIFVRLQSVRGMAALVPLVLFKDRNYSVGSVAIVSMGFMAASMMIPIMMWL QVEQGMSARDAGLIVTPMALVSLCVSPLAGILADKLHPRRLAVVGFGILISTFILLWFLM HAGVSAWWLSLPCAALGAGQSFIWGSNAATTMRDIDAHLMGAASGVYNTSRQVGSVIGVA GVSAVMQVAGAANSLVLIVAILAVGCVSSLFFRDTLHAGGGTARLQRSE >gi|227860914|gb|ACLH01000006.1| GENE 11 11368 - 11691 355 107 aa, chain + ## HITS:1 COG:no KEGG:cauri_1114 NR:ns ## KEGG: cauri_1114 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 107 1 107 107 144 100.0 1e-33 MGMIDIKKPQDVSTAATVTLGLIGGWLTARETGIRPLGGVVLAAAGVWAGRSWWAKTNPA TTAGLAALYTGAFGLSHPLAKKIGSWPAVLTVTAASAGAAYALSDAQ >gi|227860914|gb|ACLH01000006.1| GENE 12 11909 - 12148 254 79 aa, chain + ## HITS:1 COG:no KEGG:cauri_1518 NR:ns ## KEGG: cauri_1518 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 8 79 1 72 423 116 91.0 3e-25 MLISGETMTTTATRPPTFFFSITNPNNPHAIARAKARRATYDTWQAAMPSLDADINTTAL SLVAAWSLPEGHIKSGLRA >gi|227860914|gb|ACLH01000006.1| GENE 13 12208 - 13197 803 329 aa, chain + ## HITS:1 COG:no KEGG:cauri_1112 NR:ns ## KEGG: cauri_1112 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 8 329 1 322 322 620 100.0 1e-176 MIAIDQPMSALTALTGKTLDFIDTILADFFTPSKPNQAFPTRSQIRRKVRDICKTLDDSI AYRDTRPKDTYRFSSNGTSAWLELQVGEDAGIKLDAFIHTTAAKENITVPEAVIKLLSGE IKPPATVVLHTYKARDIDDAPTYIEGFGWRAEPMPHDKTRDLTEEIKEADGYQPGLIMRK IVEGRDGTCRVGGCNEPAFLSQLDHRHNWAEGGPTHPKNLACLCQSHHNMKTDGTLNYLL DPYSGDVIWLFEDGTWTITEAEGPLAPKQKRWAQTVAQHITATRKRVREEAQHLKQKLDD YAQQQAKAQAEAEDADNTDTDASTDDIPF >gi|227860914|gb|ACLH01000006.1| GENE 14 13353 - 14837 2138 494 aa, chain - ## HITS:1 COG:Cgl1218 KEGG:ns NR:ns ## COG: Cgl1218 COG0154 # Protein_GI_number: 19552468 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Corynebacterium glutamicum # 11 494 14 497 497 748 83.0 0 MPQFIAPTEGITALTAAELAEKIHSRELTSREVTQAFLDRIAETDGELNAFLHVGAEEAL AAADAVDKSLDAGEEPASALAGVPLALKDLLVTTDAPTTAASKMLEGWVSPYDATLVTKL REAGIPILGKTNLDEFAMGSSNENSAYGPAHNPYDTERTPGGSGGGTAAALASGQAPLGI GTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLIAAASSLDQAGPTARTVLDTALLHEIIA GHDSFDATSVDKPVAPVVAAAKEGANGDLSGVKVGLIKQFERDGWQPGVMEAYHAAVEQL KSQGAEIVEVDCPHFDDALAAYYLIMPCEVSSNLARFDGMRYGLRVGDDGTHSAEEVMSL SRAAGFGPEVKRRIMLGTYALSVGYYDAYYLQAQRVRTLIAQDFERAFEQVDVLVSPTTP TTAFKLGEKVEDPMEMYNFDLCTLPLNLAGVCGMSVPSGMASDTNLPTGLQIMAPAFKDD RLYKVGAAYEAGRK >gi|227860914|gb|ACLH01000006.1| GENE 15 14840 - 15142 385 100 aa, chain - ## HITS:1 COG:Cgl1217 KEGG:ns NR:ns ## COG: Cgl1217 COG0721 # Protein_GI_number: 19552467 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Corynebacterium glutamicum # 1 99 1 99 99 107 73.0 5e-24 MSDISRDEVAHLAKLSRLALSEEELKQFAAQIDEIVDSVSAVGKVEAEGVEPMSHPHSVH APMREDVVVRTLTAEQALDQAPAADDDRFMVPQILGGGDE >gi|227860914|gb|ACLH01000006.1| GENE 16 15353 - 16012 668 219 aa, chain + ## HITS:1 COG:no KEGG:cauri_1109 NR:ns ## KEGG: cauri_1109 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 219 1 219 219 381 100.0 1e-104 MSYLVRVLLPDTPGSLGLLANAMGSIEANIRSVDIVENFPDGTVMDDIVLDLPQTTMADE IITAAQTVEGVEIDSIRPFSGRVDRRGQIHVLAKVASQRNVTAAMKEVCAAIPKALTSNW AIVSANDEKISRIAASDAAPADDGSIPTDLNITSARVLNPEKDTWIPESWTLIESALAAA PLVGTKYVVVMGRVGGPDYLASEVEHLGDLGAILGAFLT >gi|227860914|gb|ACLH01000006.1| GENE 17 16019 - 16777 724 252 aa, chain - ## HITS:1 COG:no KEGG:cauri_1108 NR:ns ## KEGG: cauri_1108 # Name: not_defined # Def: HMP-PP phosphatase (EC:3.6.1.-) # Organism: C.aurimucosum # Pathway: not_defined # 1 252 1 252 252 507 100.0 1e-142 MKIAALDMDGTVYVNEDITEAVKEAITAWRDAGNLAISATGKSIANARNTLEPFGVELDY HVLYNGTVITDGDYCILHEEHLPSDIVQAVINRYTGLPLNIYLTGLSGADQVAWDGLAGR ESSMVANTEVVDPGDVAKRSTVLMSLWIPGNAELRREVDEWVRANCAVESSFNCDFYDIM PPGHNKGEGLTRLLDHLGHEEAELYTFGDSFNDLSMHSIATESFTFPGTQIADEVDHVVP DVAAGLSLLLDR >gi|227860914|gb|ACLH01000006.1| GENE 18 16774 - 17544 589 256 aa, chain - ## HITS:1 COG:no KEGG:cauri_1107 NR:ns ## KEGG: cauri_1107 # Name: not_defined # Def: putative hydrolase # Organism: C.aurimucosum # Pathway: not_defined # 1 256 1 256 256 528 100.0 1e-149 MKLAAFDLDGTIYFDGHMPEEVPEAIAQWRAAGNLAVVATGKSPYSARRALEPFGVDFDY YLLCNGTVITDGSYELLYENHVPPEVVRAVYERVRDIPKLDLYCTRLEGPDGHLVRNVEG VHNPIISEPVPVSPERIEKEVFPLVAAWTPGDPELQKEIAQWVTDRFPVGTAMNRNFFDI TPSGHDKGFALTWLLEHLSRERSEIELITLGDGHNDLPMHALADVSLTFPWAHPEIQKAC TAVVDSSMKGLIHYGA >gi|227860914|gb|ACLH01000006.1| GENE 19 17541 - 19565 2176 674 aa, chain - ## HITS:1 COG:Cgl1215 KEGG:ns NR:ns ## COG: Cgl1215 COG0272 # Protein_GI_number: 19552465 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Corynebacterium glutamicum # 3 674 4 678 680 927 69.0 0 MSDAVDIQREWSELAQEVRKHRELYYNGEPSIPDADFDELFQRLLALEAEHPELQTPDSP TQQVGAAPEGAVDIEHLERLYSLDNVFSAEELQDWLDRTPAEAYLTELKIDGLSIDLVYR DGKLVTAATRGDGRVGEDITANARVIPDIPHELTGTDEYPVPSLVEVRGEVYMRPDEFEE INAARREDGKPTFANPRNAAAGGLRMKDPEDVKKRRLHMVCHGIGARERFQPTSQHDAYK ALEAWGFPVSPYTQRVTTAKEVQERVTYWEEHRHDAYFEMDGLVIKVDDLASQRALGATS RAPRWAIAYKYPPEEVTTKLLNIEVGVGRTGRVTPFAIMEPVFVSGSTVSMATLHNQFEV KNKNVLIGDTIIIRKAGEIIPEVLGPVLDKRDGSETEWVFPENCPACGTKLAPQKEGDQD WRCPNTRSCPAQLAARLEYLASRKALDIGELGEKAAADLISSGVLEDEADLFDLDEQALL KSSVYTTQKGALNASGKKLLENLKTARQAEFWRVLVALSIRHVGPIAARALATRFGSMEV LRAASVEELADTDGVGTIIAESFKQWFEVDWHDNIVQKWTAAGVTMEEESSDKPAQTLEG ITVVVTGTLENFTRDSAKEAIITRGGKASSSVSKKTNYVVVGENAGSKEQKARDLGLTIL DEEGFTRLLETGEA >gi|227860914|gb|ACLH01000006.1| GENE 20 19693 - 20364 924 223 aa, chain + ## HITS:1 COG:Cgl1214 KEGG:ns NR:ns ## COG: Cgl1214 COG0847 # Protein_GI_number: 19552464 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Corynebacterium glutamicum # 2 221 13 231 237 278 61.0 8e-75 MNFDATRMLSFDLETTSVKPKEARIVTSALVRIDGREVDKREMLADPGVEIPEEAAKIHG ITTEKARAEGRPHEEVLKETVDSIYQAWDEGLTLIVYNAAYDLSVLRALTGDFTVNGPVF DPFVIDRVKDKWRKGKRTLEEVSAHYGVELSNAHEATADALAAARVAWKQVRQHFPELAQ MDSNELMEYQAVEWYKDRESFKKYLEGRGRDASDVSTAWPMIS >gi|227860914|gb|ACLH01000006.1| GENE 21 20428 - 20943 424 171 aa, chain + ## HITS:1 COG:Cgl2362 KEGG:ns NR:ns ## COG: Cgl2362 COG0640 # Protein_GI_number: 19553612 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 55 171 48 165 165 111 47.0 7e-25 METKVEARLAELEARVAALEGRTNAADARPTPATNEEDSTYWLVDALAPNEQLPDGSVIF GGYINVGKRTYAYQWQRPTNFVTDESWAENLERLSALAHPVRGEILRRLLAAPATPAELV EEDIVSSTGTAYHHLNALAHAGWTTKSGGEYSIRPARVIPLLTIITASEDH >gi|227860914|gb|ACLH01000006.1| GENE 22 20943 - 21941 787 332 aa, chain + ## HITS:1 COG:Cgl2363 KEGG:ns NR:ns ## COG: Cgl2363 COG1680 # Protein_GI_number: 19553613 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Corynebacterium glutamicum # 8 314 16 319 342 194 35.0 1e-49 MRRISLAVIAAIAVASILLIAGPQRIALAKDKTGDEALAAQLEEHSESGFHNITAFTLQD GKATFAGLGSDEHTEVEIGSVTKMFTGELAHQLVEEGKLRTDTTVGEVLDVGDAPVADVT VRELLDHTSGLPAVAKANVLSFFASTITGSNPYEGETVEDIVDAATKAELKDRGEESYSN LGYGLLGHMVETAAGQPYEQMLKERIFEPAGMTETYLMTPGSVPDDAPRGLTATGRHAEP WEMEGSAPAGAIRSTASDMAKFAEWFMDNGDTDYGWQPPSKDNAGYWHNGGTYGYSTMLI IEPETKRAAFANNDSLAGTEDLAQALFDELAP >gi|227860914|gb|ACLH01000006.1| GENE 23 21951 - 22211 202 86 aa, chain + ## HITS:1 COG:no KEGG:cauri_1102 NR:ns ## KEGG: cauri_1102 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 124 100.0 2e-27 MFLTVALAVITASELWAALKALRKPLSTTNHIVTAAITILAILFVGYAMPWHTSVSFGWW YALVAACSLHIGAVAWRAGAPKNPSV >gi|227860914|gb|ACLH01000006.1| GENE 24 22221 - 22499 289 92 aa, chain + ## HITS:1 COG:no KEGG:cauri_1101 NR:ns ## KEGG: cauri_1101 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 92 1 92 92 149 100.0 3e-35 MHIACTIMTGMTKPKTTNVQIRDVNTDVVDILKMRADRKGISLSSYLRETLEKVASRPSL EEKLEELSQREPVQLKKDFDVVAAIREARDAS >gi|227860914|gb|ACLH01000006.1| GENE 25 22496 - 22891 250 131 aa, chain + ## HITS:1 COG:no KEGG:cauri_1100 NR:ns ## KEGG: cauri_1100 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 131 1 131 131 242 100.0 4e-63 MTLLVIDASAAIEFLLKRDALQRHSTAYPEADFIAPSHMPLECLNVLKRLERAGAIDSAT ASFLANDVMEFNIELISVGDIANHVWSRRHTFSIYDSAYVAVSNIFEAPLLSRDTRLMAA WPNSINLDSLP >gi|227860914|gb|ACLH01000006.1| GENE 26 22964 - 23173 264 69 aa, chain + ## HITS:1 COG:no KEGG:cgR_1315 NR:ns ## KEGG: cgR_1315 # Name: not_defined # Def: hypothetical protein # Organism: C.glutamicum_R # Pathway: not_defined # 6 69 8 71 383 82 60.0 6e-15 MSPHENPFRPTFGVPPLFWVGRTAVLDTFRAALDSQPGSPGRSLIISGARGIGKTVLLNE IEDIASSRG >gi|227860914|gb|ACLH01000006.1| GENE 27 23180 - 24094 808 304 aa, chain + ## HITS:1 COG:no KEGG:jk1323 NR:ns ## KEGG: jk1323 # Name: not_defined # Def: hypothetical protein # Organism: C.jeikeium # Pathway: not_defined # 1 298 73 389 390 199 40.0 1e-49 MRASGRSSMVDELVDTTIPRIMDKLAPADKHKVNRVGIGGVATIGIQHNTEEAYKPTLNT RLRELLGMLKGTGVLLTIDEVQDADAEDLTSLAVTYQDLVRDELDVAIVAAGLPQGVNRL LDLPGVTFLRRAQKFVLGPLSSANAEVAFTETASQSGLEFTDDAVAAAVRLSRGYPYMVQ LVGSLAWGKAQREGGSRIEERDVTAVSAEAISVLGAQVHQPATLSLPPAQRLFLEAMSAV MEDGTAEIKNIAAHQDRTVRSLSATRQRLIDADLIEPTAHGQLQFVIPYMEAYFTATDSL GRVD >gi|227860914|gb|ACLH01000006.1| GENE 28 24091 - 24999 875 302 aa, chain - ## HITS:1 COG:no KEGG:cauri_1097 NR:ns ## KEGG: cauri_1097 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 302 1 302 302 564 100.0 1e-159 MTGFALGPMPGTSIAEAADIIMGETELPAIPQLPERGLGSDAVGRTASMLEAISIDRGPR SWRMTARPQLLTRRTGDRLERDLDEVQEVWGESVPRVKVQALGPWSLGASIELSDGHRVL TDRGAFTELSESLLHGVHAHAADVARRFHGEVVVQLDEPLLADVVAGRIPGTTDFDTIPA VPDEVAFDLLQSFDADYLHAPPLWSLARAAKTFLTTFHGLDTPRHLDGLGEHLNAGHRIG LGIEGSDSRAEAITLARHLDRIGMPRELLIDHFDVYPVKASARSLRSVSETAGILTRDAG DL >gi|227860914|gb|ACLH01000006.1| GENE 29 25000 - 26085 1239 361 aa, chain - ## HITS:1 COG:Cgl1211 KEGG:ns NR:ns ## COG: Cgl1211 COG0482 # Protein_GI_number: 19552461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Corynebacterium glutamicum # 1 361 1 364 365 536 73.0 1e-152 MRVLVAMSGGVDSSVAAARAVEAGHDVIGVHLALHKDAQQTREKARGCCSLEDSADARRI CDKLGIPFYVWDFSEEFKEAVIGDFVDSYARGETPNPCLRCNEKIKFAALLRKGMALGFD AVATGHYATIDSDGYMRRSLDENKDQSYVLGVITKEELDHCFFPIGDTPKPQIREEAKRH GFSTAAKPDSYDICFIPDGNTQAFLGRSIGLRPGMIVDTEGNELKEHDGAWNYTIGQRKG LDIKTPTADGSPRYVTDIDAATGTVTVGSRADLAVTHIEADRLKYLHPAMEGDFDCEVQV RAHGSVVPCHAHVDREADRMTLELNEPLSGVARGQAAVLYLPSPDELGDIVLGSGTICGT E >gi|227860914|gb|ACLH01000006.1| GENE 30 26190 - 27032 751 280 aa, chain + ## HITS:1 COG:Cgl1208 KEGG:ns NR:ns ## COG: Cgl1208 COG0421 # Protein_GI_number: 19552458 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Corynebacterium glutamicum # 3 277 12 292 314 331 59.0 1e-90 MGRKRKTTSSIAGTYEISTGELIVEADPFRDGAFILNINGVPSSHLIPEEPRTLEFEYMR WIAAAVENLAPGKRLLHLGGGGCSLPRYFADLWPDSHNTVVELDAKLAELIRELADIPSA PRVKIRAGEAREVTEGFPPNRFDVIIRDVFAGDTTPKPLTTQEFFQHAHATLCPGGLYVA NCGDHSDLQGAKAELAGMAEVFAHVAVIADPPMLKGRRYGNIILIGSDTELPADGSPEAA ALAKPLLSGAVPAHFRDESWTRRFFKGAAPRRDTVATNND >gi|227860914|gb|ACLH01000006.1| GENE 31 27029 - 28183 1401 384 aa, chain - ## HITS:1 COG:ECs2905 KEGG:ns NR:ns ## COG: ECs2905 COG3757 # Protein_GI_number: 15832159 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Escherichia coli O157:H7 # 23 237 59 270 275 122 36.0 1e-27 MSHARRLVTAAVTAVAAVALSVSTAVAIPSYAPSGVDVSGNNHASLRGIDWDAVKSDGQS YAFVKATEGVGFVNNHFVRDANAAAAAGLKVGAYHYARPAGDAKQQAASFASQIALVPTQ TLPPVLDIEVDEGLSAKQLEEWIDTFMTELKSLTGRTPMLYTYKYFWMGQMGNTTRFSEY PLWLAAYQDTAPEPVGGWDKLAFWQRSGSGRVAGIETDVDMNLFNGTEAQLHSFSGGNYI DFGGILDDLVIPGVDLGDDAGVLIAGILALAAGAVAVPAVADAAKDAGMDVDPTGLIKQA EKLLNDGAINADDLKDMSNNDASVGDLAIFLDNAQHLQDVDADNVSQQDVENADRAARSA GHAAGVALPAFDSKQVADLLNSLR >gi|227860914|gb|ACLH01000006.1| GENE 32 28180 - 28296 58 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLLGAAVEDRVRDVAKEFKVSRVVSVTDVIETVVWLA >gi|227860914|gb|ACLH01000006.1| GENE 33 28382 - 28777 366 131 aa, chain + ## HITS:1 COG:no KEGG:cauri_1093 NR:ns ## KEGG: cauri_1093 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 131 1 131 131 220 100.0 1e-56 MDQPTAPKALEKSQESGPPPRRGLAKVFNEKLALWGSLIILCGWALGFLSLFVADAVEEP ASALIGSFGIFTFIGLCFAAPVLASLFAFLAFKSLSSDEPPARRRTAVFALVLALLSIVP IIVYFGPKFMF >gi|227860914|gb|ACLH01000006.1| GENE 34 28789 - 31212 2239 807 aa, chain - ## HITS:1 COG:Cgl0941 KEGG:ns NR:ns ## COG: Cgl0941 COG2898 # Protein_GI_number: 19552191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 49 781 41 784 804 610 47.0 1e-174 MEYKMQIFSANNLRHLARRTPVTWGLILLMWGLVIVTYAVPGLAGITQTIGLTGRTFGAV VALTLMALAFVLPSEYRLGSVRTLAVGIAAQLISVPVAYVAAHGIEEIGLNRWGDDLLSS TDLSPIGFIVGTAGFASAWMPRLWQRRVRLSILALTLTMALYGGTLSDVLGVSATVLSIA AGIAWSVFVPRTSAQRPAAFHRASVPERRVLTALILGVVAIGPAFVALDPLAEGPFSPVT RLMWSFNSAAYHATELCQTDPTSQACQAALDVARVHGVGPAIASVMPLIIQLVLCFGLIR GRRLAWLLSVLTQVLVIAVLLAQLWDFSQEGLVLYGVNLAAVVLPWATCLLMLIWNRRVF HIHESADALGQAAGKIAAAFALTAALWGVGALFFKDGFVEPATADTILAELPLRYAPPVV ATLLPLKLAPTTWLTWALYEWAGTLFWMYAAWVAYRMFATPANPEAAEARERARAILEQG SGDHLSAMTLWKGNRYFFNDSNYVAYRVHNGIALSLGEPVGNEPEATAAAFEEFAREQGW RPAWYSVRENFTRPGFRRLEVAEEAVLDTANTEFKGKKFQNIRTARNKAGKEEVTTLWTE WKDLDLATRNKIAELSEEWVSDKALPEMGFTLGGVNELREEGTKLLLALGEDGTLHGVTS WLPVRENGTVVGYTLDVMRRADHGFKGAIELLISEALIIAASEGCAWISLSGAPLAGTPE EPGLLDVLLTRLGEEMEPLYGFRSLAASKRKFQPEEHKWYLAYNDELALPAIGLAVVHAY VPDMRAADAARAVKTWLAERRQALREP >gi|227860914|gb|ACLH01000006.1| GENE 35 31181 - 32434 1202 417 aa, chain - ## HITS:1 COG:Cgl0942 KEGG:ns NR:ns ## COG: Cgl0942 COG0627 # Protein_GI_number: 19552192 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 36 400 37 424 426 333 46.0 3e-91 MNNFIQSVLGLPLTDPVNGGIYIAIVVISALLIAWRLRKRDFVSFLLAAVIATVAFFVLK HWDVPFHLFVAGLVPIAALISLIHHAGRRVLMAVIAAFSTLAVAGLANMEYQSYPDIGSL DPTPVAQEMDYAQFKAMKSSDSAAIVHLDLPGTNSGFTARQATAYIPPAYWTQPERKLPV LVLLHGNPGGPEQWFGSGEAAETADAFQRANGGLSPIVLAVDATGSETANPICADTSAAK VMTYLTTDVPTGIKSAFRVDENQQHWTVTGLSYGGTCSLQILTNHPEAYGQAVDISGEAE PTIGNHAATVSKFYGGDESAYQAANPAHLLEVKKYPDNQAIFIAGNRDNNAVNALSQLND AARAAGMRTFYTTRPGGHSFEVWRPALREVFAWVARRGGLADLTDPFDGVQDADLQR >gi|227860914|gb|ACLH01000006.1| GENE 36 32525 - 33661 1116 378 aa, chain - ## HITS:1 COG:Cgl1203 KEGG:ns NR:ns ## COG: Cgl1203 COG1104 # Protein_GI_number: 19552453 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Corynebacterium glutamicum # 4 377 5 371 376 401 62.0 1e-111 MPRYLDYAATQPMRQCAIDAWVSASGALNPGASYASGRKARSVLDDARETVAELLGCEPI EVIFTSSGTEADNIAIQGLFRAAQSAAEERSKRIVSTPIEHPAVLETVEKLRAEHGASVD LLPVDSTGHVSDLSALDTQAALATCMWANNETGAIQPVADITERAAAQNTPVHIDAVQVA GKLPINFHELGATTLAASAHKFGGPRGIGLLLARRTPAPLPLAFGGGQERGIRPGTVDVA SASALAAALRESVAEMEQENTRLTALRDKLQAGIEDSIDNVIINSAEPTLASHLHVSFPG TDGDSLIMLLDAAGIEASAGSACHAGVNRMSHVLEAMGIDEEHGRGSLRFSLGRMTTEED IDATLAELPEIIRRARSV >gi|227860914|gb|ACLH01000006.1| GENE 37 33661 - 34620 1383 319 aa, chain - ## HITS:1 COG:Cgl1202 KEGG:ns NR:ns ## COG: Cgl1202 COG2025 # Protein_GI_number: 19552452 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Corynebacterium glutamicum # 1 315 1 317 317 310 61.0 2e-84 MSHVYVLVEHEAEQLSPVTGELITAARALGTVSAVVVAKDAATAASFDAELGNLGAAQVV QATAADYEQRIVTPEVDALHALAANNPAPIVLAATPTNNEIAGRLAARLGSGALVNVDGI NADGSAHHTIFGGSYETSSTATGSVVYTLRPGSVVAEPQPVTAAPAPFELPASTAKDVTV TSFTPAEKTARPELTSAKVVVAGGRGVGDKFADVVEPLADALGAAVGATRDAVDEGFYDP AFQIGQTGATVSPNLYIGLGISGAIQHTSGMQTSETIVVVNQDQDEPFFQIADLGVVGDL HEIAPALAKELEARKGAGN >gi|227860914|gb|ACLH01000006.1| GENE 38 34632 - 35432 1140 266 aa, chain - ## HITS:1 COG:Cgl1201 KEGG:ns NR:ns ## COG: Cgl1201 COG2086 # Protein_GI_number: 19552451 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Corynebacterium glutamicum # 1 264 1 262 262 253 56.0 4e-67 MPVIVALVKHVPDTWSTKTLEADHTLDRTSVDNVIDEVNEYSVEQALRLRDDNADAGYEV VALTMGPAAADEALRKALAMGADHAVHVTDDALAGADALATAWVINAAINKVAEKFGEVQ IITLGNNSSDASTGLIAGLLAEYRQLPALTELKAASLAGATATGTREDVHGHWELSANLP AILSFTDKADKPRFPNFKGLMAAKKAEVTTLAVADLGIDGVPSTTTVTASAQRPARTAGE VIAETDPAVAAAKVADFLAAKNLIEG >gi|227860914|gb|ACLH01000006.1| GENE 39 35467 - 36618 905 383 aa, chain - ## HITS:1 COG:Cgl1200 KEGG:ns NR:ns ## COG: Cgl1200 COG0500 # Protein_GI_number: 19552450 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 1 373 1 384 387 363 56.0 1e-100 MSYTLDEVSFLRAHATAIDAAAADLEGTKKAHLRDVAKLQAHFGDYGRAVAELIQARSSG KLPGQWLMDHDSAQQATPPAVAAYRAQFLQERNVDVVHDLTCSIGTEGQAYRPGTYVGSD LDVSRVAMAQHNIEHPVFRADALTTTTTAQVCIADPARRQGGTRITRLDQLLPPPADLLA THGEMAIKCAPGIDHSEWEGLACVVSLDGGVKETCLYTPGLGTGKRAVVLSTTPDGIHTD VIDDDVAEHELPEAGPISRFLIDPDGAIVRAGLVRHYAAREGLHQLDPRIAYLTGDRLPH GTSGFEFIEMVPMKKLKAAMAAHDVGSLEILVRGQDVNPDQLRKKLKLKGSTAKTLVVTR IGTKGVAVLCGPRVVSTEGNYAP >gi|227860914|gb|ACLH01000006.1| GENE 40 36639 - 37466 974 275 aa, chain - ## HITS:1 COG:Cgl1199 KEGG:ns NR:ns ## COG: Cgl1199 COG0494 # Protein_GI_number: 19552449 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 19 274 5 265 266 237 49.0 2e-62 MSQSIHDSLDAIDPGETTGFNGARLAATVLLLRDTAEGLRVWIQERVRTMRNYPGHVVFP GGGVDPRDFPPRTWDSGELWAGRSVVSMARRMGVTKYKAHALVFAAARELFEEAGTLLAI REDGLVSDASRYHRERELLETHEISFTEFLEHNGMRVDADMLLPWSRWAGEDNNHWFDTF FFIGVLPEGQEPDGDTGEADDAGWFDPQLVLDGWRAGLVRLAIPTWAQLKRLTSYATVKE VMDDASFSDLRPIIGDPRDDERYREYFTTFPVDRI >gi|227860914|gb|ACLH01000006.1| GENE 41 37562 - 38410 205 282 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 44 254 24 224 305 83 27 3e-15 MVPVNTPEQLSQQDPELMETDEDWLIDFRGVELRRGGRTLVGPVDWQVELDERWVIIGPN GAGKTSLVRMAAAEEFPSAGVAFLMGERLGKTDMRDLRAAIGISSAAVQHRIPDNERVDD LVVSAGYAVLGRWREDYQDMDFSRADDILEQVGAAHLSERTWGTLSEGEKKRVILARALM ANPELLILDEPSAGMDLGGREDLVGYLGDLALDADAPAIVMITHHVEEIPYGFTHAMLLD EGKVVAKGLINSVLTSENLSKAFHQPIQVDRIGERYFARRVR >gi|227860914|gb|ACLH01000006.1| GENE 42 38462 - 40474 2306 670 aa, chain + ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 3 670 1 675 675 893 65.0 0 MGMTQRLGIDDVRPSLSGNAASKAVVGEVVPVTALVWREGHDAVAATLSVWNTESPSTSA VTMTVDPEDQDRVHGVFTPATPGRWFFRIDAWSDPMSTWRNAVVKKMEAGQSARELSNDL LHGAELFEEAAIQCPSDKAELLFQASKELKDDTVDVDKRVRTALSEEVAEILHHHPLRHL LVEGDIHEVLVERRDALYNSWYELFPRSTGGWDDEGNPVHGTFKTTAQALERVAAMGFDT VYFPPIHPIGKVHRKGRNNSVVAEPGDVGSPWAIQDHSTTHPELGTMEDFKELVKKTADL GLEVALDLALQASPDHPWAKTNPEFFTVLADGTIAYAENPPKKYQDIYPLNFDSDPDAIY AEIYRIVMIWVEAGVTTFRVDNPHTKPANFWNWLISKVHITHPEVIFLSEAFTRAPRLFG LAKAGFTQSYTYFTWQTSKHELTEFAQMHVEQADICRPNLFVNTPDILHESLQTGGRAMF AIRATLAATLSPLWGVYSGFELYEHQAVKPGSEEYLDSEKYELRPRDFQAALKSGDSLES YIRLLNVIRRENPALQQLRTLRFHNTDNEAIIAYSKADPATGNVVLVVVNLDPRNAQEAT VFLDLAAVGRHPGDHFTVQDTISGAAYEWSDRNFVRLEPLRDVAHVFILPPAHHDLQERI AWRRVKDYRA >gi|227860914|gb|ACLH01000006.1| GENE 43 40581 - 42701 2495 706 aa, chain + ## HITS:1 COG:Cgl1196 KEGG:ns NR:ns ## COG: Cgl1196 COG0296 # Protein_GI_number: 19552446 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Corynebacterium glutamicum # 1 705 9 730 731 923 63.0 0 MNIPASDLERLNHCRHHAPHDFYGWHDGTVRTRRPGAEAVELVTATETVAMRAVGDDIWE APLAEEADYRLRITYPGQPAFEVADGYHFLPTLGTLDQHLIGEGRHERLWEVLGANLKSY TTDMGVVEGTAFAVWAPNAEGVAVVGDFCGWNPTQYPMRCLGSTGIWEVFIPGVGEGECY KFAVHGKNSPRIDKADPLAKRTIAPPETASVVARSSFKWSDEEWMSKRTGDLDVPMSVYE LHVGSWKVGANYNTLREELIPYLIEHGFTHVELLPVAEHPFGGSWGYQVSGYYAPSARWG SPDELRALIDELHNAGIGVFVDWVPAHFPKDEWALGRFDGQALYEHPDPRRGEQADWGTY VFDFGRNEVRNFLVANALYWAEEFHVDGLRVDAVASMLYLDYSREEWLPNIYGGRENLEA VQFLQETNATLNRNHPGVLTIAEESTSWPGVTAPTHEGGLGFSLKWNMGWMNDTLEYFKH EPIHRRYHHGELTFSMVYAYSERYVLPFSHDEVVHGKGSLWERMPGDDWNKAAGLRALYG YMFSHPGKQLMFMGQEFGQTTEWAEGHSVDWSNLEGWGNEWHHGIKRLVRDLNAVYKQQP ALWTQDFTQDGFQWVKADDSNNNMLGYVRYGKDGSALLAVCNFSGSSVPNYDLWVPRDGE WELLINTDDAVYQGAGNDLAHRVRSEGNHVQLHLPANSVQWYAFRG >gi|227860914|gb|ACLH01000006.1| GENE 44 42793 - 43191 350 132 aa, chain - ## HITS:1 COG:Cgl0264 KEGG:ns NR:ns ## COG: Cgl0264 COG0394 # Protein_GI_number: 19551514 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Corynebacterium glutamicum # 1 126 1 127 129 93 48.0 1e-19 MTSVLFLCNTNRGKSQMAAALAKKHAPDWEVHSAGVKTTEQHREQGVNAEAQASLAKVGA DMEGTPTLLDADLASSVDHVIIVGDADYDGMAERWEIEDPSVRGLEGEERMDALRDDIDA RVRAFLDTHAQD >gi|227860914|gb|ACLH01000006.1| GENE 45 43239 - 44816 2254 525 aa, chain - ## HITS:1 COG:Cgl2326 KEGG:ns NR:ns ## COG: Cgl2326 COG4166 # Protein_GI_number: 19553576 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 3 524 6 524 525 625 59.0 1e-179 MRKLLGVIGATSLAFTLAACGSDSSDSAGGSNYVRVLGTEPQQGLIPAMTNENGGGRIVD MLYSGLVYYDAEGNVHNEMAESIDQEGEKTYKVTLKPDLKFSDGSAVTAATFVDTWNYAV ANEQLNESFFSSIKGYGEGVKEMEGLKVIDERTFTIELTQPESDFPSRLGYNAYFPVPAA ALEDPQGFGESPVSNGPYKIKEWNHNQNLIIEPNPEYKGDRAAQNDGIEFAFYADSSAAY MDLLANNLDVLEAVPSSAFGSYEQDLAGRQETKPAATYLEMSIHVETPHFSGEEGTLRRK AISMAINREEIAETIFHGTRTPAREFTSPVLNGYNDSLPGSENLDYNPEAAKKLWAEADK KYGAFEGTFPINYNTDGDNKDWADAVANSISNTLGIQAVGNPYPDFKSFRDAYRTERMDG AYRTAWFADYPSMGNFLGPNFTTGVASNDSKYSNPEFDELIVKANGAANEEEAAKLYNQA QELLLRDLPSIPLFYPNVVGGWSENVEDVTFNWKSLPVYYAVKKN >gi|227860914|gb|ACLH01000006.1| GENE 46 45022 - 45945 1124 307 aa, chain - ## HITS:1 COG:Cgl1191 KEGG:ns NR:ns ## COG: Cgl1191 COG3118 # Protein_GI_number: 19552441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Corynebacterium glutamicum # 1 307 1 307 307 263 54.0 3e-70 MTGPYVGGALDLGAIKQQAEAKAKAQEQGTTGASAGVQPFFEVTEQNFENDLVRRSAEVP VIALIGSPRSPASEQLKKDFEEMAAAGGLKFIVGYINADVVPQVAQVFGVQNLPTTVAIA AGQPVTNFEGGQPRENLEQWVAAIVDKLGPQLKGLPKQEEAGEGPAEEVADPRLSLAEEA LNRGDFDSAIATYEEILAAEPDNVEIKQARDTTLLLKRLDPANRSEDPIAAADAAPEDVS KQLDAADAEVVAGAPDRAFERLIEAMKRTAGDEKEQLKTRLLELFGLFDSGDPRVLAART KLASALY >gi|227860914|gb|ACLH01000006.1| GENE 47 45942 - 46250 369 102 aa, chain - ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 101 17 117 117 123 71.0 7e-29 MIVAFSVAPTVVGDESAEMSAAVAEAVRVVRASGLPNETNSMFTIIEGEWDEVFAVIKEA TDAVRAVSPRTSLVIKADIREGVTGQITQKVDSVNRYLEENK >gi|227860914|gb|ACLH01000006.1| GENE 48 46249 - 46473 85 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPAILPPVPAVPVPMATIIGAPTGVPWPRHDVRHPGRDVVVASRTYVVLLGGGTTNVPHE EWLPMGPVRTGNGL >gi|227860914|gb|ACLH01000006.1| GENE 49 46545 - 47237 802 230 aa, chain - ## HITS:1 COG:Cgl1188 KEGG:ns NR:ns ## COG: Cgl1188 COG1637 # Protein_GI_number: 19552438 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Corynebacterium glutamicum # 1 230 1 230 230 376 80.0 1e-104 MRVVIAQCSVDYVGRLDAHLPMADRLILIKADGSVSIHADDRAYKPLNWMTPPCTFEESA IEDIDGEDTGEKLWLVENPKGEQLRITIAQIHQEIDMDLGEDPGLVKDGVEAHLQELLAE HIETLGEKYSLVRREYPTAIGPVDIMAKNSKNEFVAVEVKRRGGIDGVEQLTRYLELLNR DDLLAPVHGVFAAQEIKPQARTLAEDRGIRCVVLDYQELRGIESNELRLF >gi|227860914|gb|ACLH01000006.1| GENE 50 47261 - 47746 340 161 aa, chain - ## HITS:1 COG:no KEGG:cauri_1076 NR:ns ## KEGG: cauri_1076 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 161 1 161 161 317 100.0 9e-86 MNSQVLQGLSILLGLCALVVLVFLILAAVRFFTVRSRGTSILLRQLPSKDSHSWRHGLVR YDGEYMDFFKLRSVMPRANKRFNRLDIELGSTRPMDDDEASFMPSGHQIIRISIDGRDYE IASDAHGIMALNAWVESAPSKRQEKMDYHQMRQRATRLPKK >gi|227860914|gb|ACLH01000006.1| GENE 51 47933 - 48301 495 122 aa, chain - ## HITS:1 COG:Cgl1186 KEGG:ns NR:ns ## COG: Cgl1186 COG0355 # Protein_GI_number: 19552436 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Corynebacterium glutamicum # 1 119 1 119 124 147 63.0 7e-36 MADITAELVSVERLLWTGKATMVTAETTEGEIGVLPGHEPMVGQLIDNGVVTIHPVDGER LVAAVQGGFLSVSENKITVLADWSIWASEVDEAQAQEDLKSERELTRSRGDAALRATRRL NS >gi|227860914|gb|ACLH01000006.1| GENE 52 48312 - 49760 1995 482 aa, chain - ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 1 481 1 483 483 870 92.0 0 MTTALQEQNTQSSATAGRVVRVIGPVVDVEFPRGGLPALYNALTVEVTLEAVAKTVTLEV AQHLGDNLVRAVSMAPTDGLVRGAAVTDTGKPISVPVGDVVKGHVFNALGDCLDQPGLGR DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKGGKIGLFGGAGVGKTVLIQEM ITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVALS GLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQER ITSTKGKSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRGIASKGIYPAVNPLTSTS RILEPSIVGERHYEVAQRVIGILQKNKELQDIIAILGMDELSEEDKITVQRARRIERFLG QNFFVAEKFTGLPGSYVPLADTIDAFERICNGEFDHYPEQAFNGLGGLDDVEAAYKKLTE KK >gi|227860914|gb|ACLH01000006.1| GENE 53 49764 - 50747 1220 327 aa, chain - ## HITS:1 COG:Cgl1184 KEGG:ns NR:ns ## COG: Cgl1184 COG0224 # Protein_GI_number: 19552434 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Corynebacterium glutamicum # 1 327 1 325 325 431 73.0 1e-121 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEAAQPYARELSNVLNKLAAHT SLDHPMLREREDAKVAAILVVSSDRGMCGGYNNNIFKKAAELEALLKSEGFETVRYVTGN KGVGFYKFREAEVAGSWTGFSQDPTWEKTHDVRRHIIDGFVAGSNGQAKTREGINVEGET VRGFDQVHVVYTEFESMLTQTARVQQLLPVVPVIEEEDYNMGESALSDAEPNNQITPDYD FEPDADTLMEALLPQYVSRLLFAMFLESSASESAARRTAMKSATDNATELVKDLSRVANQ ARQAQITQEITEIVGGAGALAESAESD >gi|227860914|gb|ACLH01000006.1| GENE 54 50804 - 52444 2178 546 aa, chain - ## HITS:1 COG:Cgl1183 KEGG:ns NR:ns ## COG: Cgl1183 COG0056 # Protein_GI_number: 19552433 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Corynebacterium glutamicum # 1 546 12 557 558 869 82.0 0 MAELTISSDEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGLPSVMANELLEFPG GVIGVAQNLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDG MGPITAEEDRVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTA VCIDTILNQKANWESGDKNKQVRCIYVAIGQKGSTIAGVRHTLEQHGALEYTTIVAAPAS DAAGFKWLAPFSGAALGQHWMYQGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYPGD VFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLF NQGVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAYRDLQAFAAFASDLDPASKAQ LERGERLVELLKQSESSPQPVEYQMVSIFLADQGIFDVVPVEDVRRFEKELHDHLNSATP QVFEQIQGGTALTDESKDALVAAAKDFTPSFRTTEGNNLGTEAPVDPLAADDVNKTELNV SRKTAK >gi|227860914|gb|ACLH01000006.1| GENE 55 52505 - 53320 1049 271 aa, chain - ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 1 271 1 271 271 297 66.0 1e-80 MKAASREALATVESKLDEFLSGDRSVATATQAGQDLFEVVRVLDGDRELRVALTDDASTS EERKSLVQTLFGGKVSPVALQVLQEAAAAQWSTPRDIARGLIILGRRALLRGAEFEGKLG QVEDELFSLSRVLDREGELTQLLSDRTATSDRKVGLLASVLYGKVTMVTEALALQAIGRP EQNPIDDLAGLADTAAKLQGRTIARVTSAGELNDSQRAALAEKLGKIYGRAMSIHSEVDT SLLGGMTIRVGDEVIDGSTAGKIARLRAQMA >gi|227860914|gb|ACLH01000006.1| GENE 56 53327 - 53899 825 190 aa, chain - ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 1 190 1 188 188 214 71.0 7e-56 MNNVIYYLAAEGSETLPLESGNSILLPKMYDLVWSIIPFTIILIVFWKLVLPAYNKMLQE REDRIEGGLKRAEAQQAEAKAALEKYNAQLADARAEAAEIREQARERGKLIEAEAKEAAE EESRRILTAGEKQLEASRAQVVSELRSDIGQNSINLAEKLLGGELSDATKQSSTIDNFLS ELDTVAPAGK >gi|227860914|gb|ACLH01000006.1| GENE 57 53945 - 54187 454 80 aa, chain - ## HITS:1 COG:Cgl1180 KEGG:ns NR:ns ## COG: Cgl1180 COG0636 # Protein_GI_number: 19552430 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Corynebacterium glutamicum # 1 80 1 80 80 103 91.0 8e-23 MNEIILAQAADESTLKGLGAIGYGIATIGPGLGIGILVGKTVEGMARQPEMAGQLRTTMF LGIAFVEALALIGLVAGFLF >gi|227860914|gb|ACLH01000006.1| GENE 58 54285 - 55097 791 270 aa, chain - ## HITS:1 COG:Cgl1179 KEGG:ns NR:ns ## COG: Cgl1179 COG0356 # Protein_GI_number: 19552429 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Corynebacterium glutamicum # 1 270 1 270 270 383 78.0 1e-106 MKGEFHAPELDPEFFPGHVTDDGDVVDLLFADFANGWFALDRIMLVRLFMAAILVLLFVV AFRNPKLVPKGLQNVAEHAIDFVRIHIAEDILGRKEGRRFLPILATIFFGVLFWNVATIV PALNISPNARIGMPIVLAAVAYIAMIYAGAKRFGFGKFIKSSVVIPNLPPALHVLVVPIE AFSTFVMRPVTLALRLMANFLAGHLILVLLYSATNFFFFQFNGWTAMSGLTLVAAVLFTI YEIIVIFLQAYIFALLTAVYIELSLHADSH >gi|227860914|gb|ACLH01000006.1| GENE 59 55544 - 55978 469 144 aa, chain - ## HITS:1 COG:no KEGG:cauri_1067 NR:ns ## KEGG: cauri_1067 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 144 1 144 144 212 100.0 4e-54 MTDSTTSEELSPYDDHRRPLKRALRLGVIGLVVVTIASLAIWGGVRGLPGIWGVLVGAAI GGGFVLFTAASVLLTARTTPSTTMAVVLGGWLLKVVILIMVLLLIKDLEFYDTMALFVTV LLALAVTLGTEVWGVITSNVTYVS >gi|227860914|gb|ACLH01000006.1| GENE 60 55995 - 57170 888 391 aa, chain - ## HITS:1 COG:Cgl1177 KEGG:ns NR:ns ## COG: Cgl1177 COG0472 # Protein_GI_number: 19552427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Corynebacterium glutamicum # 5 374 7 376 382 431 69.0 1e-120 MAGTGVPLRELALVIFVAAAFTYLTTGLVRTFLVRSGQVAEIRLRDSHSQPTPQLGGVAM FTGFAAAVYLAGQLPALTRGFMPVTPEMNAVLWSAAAIVVVGVVDDLLELSALVKLIGQL VAAAIMSGLGLTWTLLFLPFGDGTTVILDQVQGTLLTTFFTVLLINAINFVDGLDGLAAG LGMIAGGAILVFSLTVLHDLGGTVSAYPPAIIAAALVGVCAGFLPHNFEPSRIFMGDSGA MLIGLLLAAASTSASGKINMSLYGTVDIVALMSPVIVVIAAVFIPVLDLVWAVIRRVSQG RSPFAADKAHIHHRLLSLGHTHRRTVLVLYLWVSAVAFGAVSFSIVPAPVAAVLAVFALL VAFGVTLIPLRQGKIGRRPRSTSVVLETDPS >gi|227860914|gb|ACLH01000006.1| GENE 61 57181 - 57858 782 225 aa, chain - ## HITS:1 COG:Cgl1176 KEGG:ns NR:ns ## COG: Cgl1176 COG0009 # Protein_GI_number: 19552426 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Corynebacterium glutamicum # 4 217 3 216 216 313 74.0 2e-85 MQGQIYNCADAAEREEGMALAVKAAKSGRLVVMPTDTLYGLGCDAFDNDAVASLLATKHR GPDMPVPVLVGSWDTVKGLVASLDDTAQTLIEAFWPGGLSIVVPQAPSLPWNLGDTRGTV MLRMPLHPIAIELLREVGPMAVSSANISGQTPPTTAIAAKQQLGKAVTVYLDGGEAEVGK PSTIIDLSGPHPYLLREGALSAEQIGEVIGVSAESLRTRPGSQSS >gi|227860914|gb|ACLH01000006.1| GENE 62 57912 - 58796 184 294 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3] # 61 252 80 261 302 75 25 7e-13 MTFHTYKEALRDATERLRAAGVPSPEWDARLLAAHLIHCGHMDIPLDEAPMPGFDVAYGA LVGRREAREPLQHILGVAWFGALELEAGPGVFIPRPETEVLADWGVKFLTKLNSGETTRF NSQVPRVVDLCAGSGALALYVAHYVPQAEVWAVELADAALAYIRRNVARHAPDLQLVQGD VTDSEILPALHGTVDLVLTNPPYVPETPDLDPEVYQDPHEAVFGGVDGMETITAMIPTIA ALLRPGGRVGIEHDDETSQQVQEALRAHGGFSDIEVLKDLTGTARFVTAERGVQ >gi|227860914|gb|ACLH01000006.1| GENE 63 58821 - 59897 1594 358 aa, chain - ## HITS:1 COG:Cgl1174 KEGG:ns NR:ns ## COG: Cgl1174 COG0216 # Protein_GI_number: 19552424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Corynebacterium glutamicum # 1 358 1 358 358 463 75.0 1e-130 MSNQVSLVDDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQD LADAKEMAYEDHEFQSEVDRLEPLVVQLEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEA ALFAGDLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEG GVHRVQRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNT TDSAVRITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVR TMDRSERIRTYNWPENRITDHRIGYKANNLDSVLDGDMQDLIEALQAQERAERLEAEG >gi|227860914|gb|ACLH01000006.1| GENE 64 59897 - 61837 2455 646 aa, chain - ## HITS:1 COG:Cgl1173_2 KEGG:ns NR:ns ## COG: Cgl1173_2 COG1158 # Protein_GI_number: 19552423 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Corynebacterium glutamicum # 254 645 3 395 396 594 83.0 1e-169 MSDTDKTAAQDLASLKLPELRKLAAERGLRGVSGLRKGDLITALTTGQVPARGAKAAAEG EAKDAQPRRAARKASRPAGAADQAPEQPEQDKKRQQDQPQQQSENSRKGEDGAQESERKD SHDEQRYESRSQARRARRNRARRQEREAREESKGNGNDNGAEGNNAKSDNNGKSEDNQSR GGKNSENGDHDNGGNGHNGGNNGGGQNNNRRDNHRNDDDNNGGGGRRNRRNRRNRRGRDR DGGGNGGNDLQIREGDEVQVVGGILEVVDNNVAFLRTTGYRAASSDVFVNNNLVRRLGLR SGDALTGKVKVSGPTHTHGNGRNRRKYNQLVEVDTVNGLDPSTAKERPDFAKLTPLYPNQ RLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPECYLMV VLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTSVAELAIERAKRLVEQGKDVVVLLDS ITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGST GDTVIFEEFKGTGNAELKLDRAISERRIFPAVDVNPSGTRKDELLLVPEEARIMTKLRRI LSGLDSFAAIDLLIKQLKKTRSNGEFLMQVASSAPMAADTDEEDYK >gi|227860914|gb|ACLH01000006.1| GENE 65 62305 - 64059 1917 584 aa, chain + ## HITS:1 COG:Cgl1172 KEGG:ns NR:ns ## COG: Cgl1172 COG0318 # Protein_GI_number: 19552422 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 1 571 11 584 585 805 68.0 0 MLSTMQDIPLSLTRILEYGSTVHGQTQVVTWHSANPGNEREETTFADIGARAAAFAHALH DTLGITGDERVGSLMWNCAEHLEVLFGTACKGAVFTPLNKQLMNDQIRHIINHAEVRVIV ADCRLAEQLAQVLEGVDCVRAVVFTGVDKPRTALPGNIEIYSYEQLLDGRSTVYDWPVLD EHTAAALCYSTGTTGAPKGVLYSHRALYLEGMQLRSSDSLCVTHGETFLCCIPIYHVLSW GVPFAAWMTGTPLVLPDADVSPATLAKIIAATSPRVAHGVPTIWIQLFVHYLKNPPERMT LTEIFAGGSPVPPQLIKSWEERYGVDVVHVWGMAETTTVGTVARPPSGASGEARWAYRIS QGRFPAALEYRVVNDGHVVNTTDRNAGEIQVRGNLVTGSYYHSPTSEDGGAAHEFRGKDV EDAASKFTADGWLRTGDVGFVNEDGFLTVEDRARDVIRSGGEWIYSVQLENLIMANPVVL ECAVIGYPDKQWVERPLAVTVLAAGISPTIETAERLRNGMRSELPSWMLPEYWTFVKSID KTSVGKFDKKDLRAHLAEGEYNIIRLKGPGEAQRLDTGEDDGED >gi|227860914|gb|ACLH01000006.1| GENE 66 64109 - 65248 954 379 aa, chain + ## HITS:1 COG:Cgl1171 KEGG:ns NR:ns ## COG: Cgl1171 COG2896 # Protein_GI_number: 19552421 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Corynebacterium glutamicum # 44 379 2 337 337 486 71.0 1e-137 MSAQRSQPSPPAAAPLALPLPRVRGAGTPPTDLPAPGPDGRRALVDRYGRQARDLRVSLT DRCNLRCTYCMPAEGYEWLPTEHTLSDEETIRLIRLAVDKLGIQQVRFTGGEPLLRGSLE KIIAATKALTTDEGRSPTVALTTNGLGLDKRLPGLQRAGLDRVNISLDTLDPELYARLTR RDRLADVLTSIEAALAADMDPVKINAVIMPGVNESAILPLARFCLERGAQLRFIEQMPLG PQEEWARSRMVTAEDILARLAEDFELTPAKKPRGSAPAALWSAVSRDDSLPIGHIGVIAS VTRPFCGDCDRTRLTADGAVRNCLFGNSETSLRDLMRSGASDEKIATAWAGEMWRKLPGH GVDDEGFLQPDRPMSAIGG >gi|227860914|gb|ACLH01000006.1| GENE 67 65259 - 66476 867 405 aa, chain + ## HITS:1 COG:Cgl1170 KEGG:ns NR:ns ## COG: Cgl1170 COG0303 # Protein_GI_number: 19552420 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Corynebacterium glutamicum # 9 394 6 390 403 203 38.0 6e-52 MTRTGTDLSIEEYFDRLHSLVCALPSERAALSQGRVLAEPLVARLPLPAHDNSAMDGFLI PQPSSPDSLTVPFTLPVVGDVPAGSPAQTPPPGTALRIMTGGPVPAGFDGLVIPVEDTDI PPGPGPLPETVTVHRLPGRNHIRRRGSHVEAGHQLAGAATLVDASLIAAALSASVDTAVL HRTPRVTVIATGEELLNGQLPDSNGPMLDALLSTTGPVDIARTVCGDSPVELRRRFDAAA ADSDLIVTTGGVSAGAFDVVRAVVEDAVERGSYWFGHVNQRPGAPQGHALWDGVPVVCLP GNPVAAFVSAHLYLTPLMRSLRGLPRPTGVLDRPHLTAVAGADFPHPHRPLIQPCSIAMA GSITAFPPPGPRMRSHHVAALPGTQGFALLTSPVTTGEQLTVYPY >gi|227860914|gb|ACLH01000006.1| GENE 68 66602 - 67087 509 161 aa, chain + ## HITS:1 COG:MT0887 KEGG:ns NR:ns ## COG: MT0887 COG0315 # Protein_GI_number: 15840277 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 2 154 14 166 167 132 50.0 4e-31 MKFTHLNEAGSAYMVDVTDKQPTVRSATAQGEVACSPEVLTALREGAVPKGDVLAVARVA GIAAAKKVPDLLPLAHTIGVHGCAVDIELREDHVFIEATVRTADRTGVEMEALTAVNVAA LALIDMVKGVDRSAYIRRCGITAKSGGRSGDWSRELPGEEG >gi|227860914|gb|ACLH01000006.1| GENE 69 67094 - 67660 528 188 aa, chain + ## HITS:1 COG:Cgl1169 KEGG:ns NR:ns ## COG: Cgl1169 COG0746 # Protein_GI_number: 19552419 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Corynebacterium glutamicum # 4 177 3 175 187 129 49.0 4e-30 MSGVIILAGGRGTRMGGVDKASIILAGERLIDRLLRQLPYDAPVAVVSPYHLGMPQVCEK PLFGGPAAGIAAGHAALAGAAESTTAILAVDAPDSPQMLPALEQALESSGADVAVATIDG IMQPLCALWRTEALTHALHEFGNPRNKSVMRLLGLAKNITVVEGTAAVRDIDTLDELRAR RERRATQR >gi|227860914|gb|ACLH01000006.1| GENE 70 67647 - 69026 1360 459 aa, chain - ## HITS:1 COG:NMB1623 KEGG:ns NR:ns ## COG: NMB1623 COG2132 # Protein_GI_number: 15677473 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Neisseria meningitidis MC58 # 185 459 76 346 390 132 34.0 1e-30 MSSAPVKQEHSEKKWASWLIIIVSLLAVIGLAVFNSATGKQDPATVASADAVTVDVSVDG MAFVPSAIDVAAGSHLVVNFTNTGDQVHDLKIGREETGRVEPGETVQLDAGVIEESVEGY CTIAGHKMQGMTFMVNVDESSSGEHDHAGASESTGSAGAPATVPSAAERMAAREGFEAFD ASLAPAKGELHEETWVMTEEEMEVAPGVRQTRWLFNGQAPGPTLRGKVGDKFRITIKNEG SMGHSVDFHAGEINPDKNMKTIQPGESLTYEFVAHRAGIWMYHCSTMPMSLHIANGMAGA VVIDPRGEDALADVDAEYIMTASEVFLASAGKEAEGANAQRVSDGDYDLTAFNYYPNQYD EGLAPLRAKVGDTVRIWLVNLGPDLPLSFHVVGEQFDTVYKEGAYLIKGAKDSGSQALDL LPAQGGFVEMTFNEPGTYSFVNHLMTNAEKGQHGQFIVE >gi|227860914|gb|ACLH01000006.1| GENE 71 69007 - 70206 969 399 aa, chain - ## HITS:1 COG:no KEGG:cauri_1055 NR:ns ## KEGG: cauri_1055 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 399 4 402 402 578 100.0 1e-163 MSLRDVSLASRRRWHTIAFSLVAFWIVAGVGITVANIWGAPVVWWDLIHPFTLGALTTAI LVFSTHFTEALTRTPAVGFRGVGARVGLVQVGLVLLLVDRAGYDWGVLADIGSALVIAAV AWHLWVLWTTLRGSLSGSFAVTVPFYLAAACFMIFSVVLVILAAHGVGNYSLLVAAHSRG MVWGFALLTILGTVITLLPTLTRTPISAVARARCSRALTVHCVGLAVAMLADASGLTRAA GMAQLLTVLAAVLIIQPVLAGALGGEKTTASVSAMAGLVWMLALCAGDAAATIAGAYPRA VTLLLMPAFVGAGLLQLVTGVLHHMLPILAGAARPARGHLAGFLRVGLINLGGVLSLLGI AGVSFAGLIMMGLGLIANIVALVWAVSSPQGEVHVKRAR >gi|227860914|gb|ACLH01000006.1| GENE 72 70301 - 70561 309 86 aa, chain + ## HITS:1 COG:no KEGG:cauri_1054 NR:ns ## KEGG: cauri_1054 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 155 100.0 4e-37 MNLPLVDASKGPSIPTLNASEIPHAVRHGAIHGALGTLNVGESMILIAPHDPLPLLKEVD QREESFTREYLKKEPKEVHIKFTRTA >gi|227860914|gb|ACLH01000006.1| GENE 73 70584 - 71306 763 240 aa, chain + ## HITS:1 COG:Cgl0215 KEGG:ns NR:ns ## COG: Cgl0215 COG0725 # Protein_GI_number: 19551465 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 30 226 51 254 268 92 36.0 5e-19 MRRLKIAVAGLAAALTITGCASSSDEPLQVFAASSTRVLNDELSGVSETPLVFNNGGSSA LVQQINEGAPADLLLTASRETMDNATAQGTVDIPVALASNVMVMVVPKGNPLGLRSAADL DSSARLVLCDPSVPCGAISTRIMEANNWDLHASSLEGQVADVLGKVASGEADAGWVYSTD AAANEDVEAIPLDQAEDFRNEIMGAVVSDSPRHEEAQEVLSLLESDFDSTWEKYGFTPVN Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:01:22 2011 Seq name: gi|227860913|gb|ACLH01000007.1| Corynebacterium aurimucosum ATCC 700975 contig00007, whole genome shotgun sequence Length of sequence - 8962 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 4, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1599 835 ## COG4149 ABC-type molybdate transport system, permease component + Prom 1633 - 1692 1.8 2 2 Tu 1 . + CDS 1717 - 2415 507 ## COG2345 Predicted transcriptional regulator - Term 2186 - 2224 -0.9 3 3 Op 1 13/0.000 - CDS 2421 - 3344 1231 ## COG0083 Homoserine kinase 4 3 Op 2 3/0.000 - CDS 3362 - 4687 1588 ## COG0460 Homoserine dehydrogenase - Prom 4729 - 4788 3.3 - Term 4759 - 4796 4.3 5 3 Op 3 4/0.000 - CDS 4839 - 6176 1639 ## COG0019 Diaminopimelate decarboxylase 6 3 Op 4 . - CDS 6189 - 7850 2311 ## COG0018 Arginyl-tRNA synthetase + Prom 7916 - 7975 1.9 7 4 Tu 1 . + CDS 8087 - 8960 1089 ## COG1620 L-lactate permease Predicted protein(s) >gi|227860913|gb|ACLH01000007.1| GENE 1 1 - 1599 835 532 aa, chain + ## HITS:1 COG:Cgl0214 KEGG:ns NR:ns ## COG: Cgl0214 COG4149 # Protein_GI_number: 19551464 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Corynebacterium glutamicum # 6 217 62 278 279 129 41.0 1e-29 THDLLRVSLSAAALSTLLSTFLGTCLALWLQQLRRVSHLVRLVVYLPLALPPVVGGLALT ALLGRRGLLGPALEQTGLHVSFAFPGVVAAHLFVTLPFVVVAVDSALRQLDPEVVASARG IGLSPSTILRHIILPAILPAVFTGGALAFARSLGEFGTTITFAGSLPGSTRTMPSGIYLE REVSADNAYALSAVLIGIAILTLTAAGMPLLLRRRREQAVRALQPMDPDALRAATAPLTP PHDLSVTVGDTTTTFRGGRVTAVVGPNGAGKTTLMRFTSGRLQGAQTNTERVIMLSQNPG LPPTATVAQALTMVTKDPRRTEELLKAAGLQELGHVSELSGGQAAQVALLRALAARPEVL VVDEPFAAMDVESAARWRHLLRMSAADRTTVIVTHSRVDLTTLADDIAVMEAGEVISQGP AERLLEQPTTRFMAELAGVNVLRGSFRGDTFAPDRNGEHWAAFPQTALRFDPIGAQRATS LRATIVADLGNTALVDIDGQRVTVGQPACTNAPGEAVPVALDASALTVYTRT >gi|227860913|gb|ACLH01000007.1| GENE 2 1717 - 2415 507 232 aa, chain + ## HITS:1 COG:Cgl1159 KEGG:ns NR:ns ## COG: Cgl1159 COG2345 # Protein_GI_number: 19552409 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 5 228 3 227 230 199 46.0 5e-51 MSTFSTQSPRSSTELFPDTMKLSPKQREVLSVLQKFPQGARAAEIAKKMGMHVNTARGHL DELVNAGAVRVVTAPAQGRGRPSLIFQVRVPDNRSVAEEYVTLISVLIKALAAKEQLNDY ASEQARELGREWAKTTASSHGAEALGSLHRMMREMGFDPVTSAEQFDQEGRTDVELHACP FVTAGVEPSPFVCAIHDGYLEQAAADSGGRLNLKLIPKSGNGVCRINVEKSS >gi|227860913|gb|ACLH01000007.1| GENE 3 2421 - 3344 1231 307 aa, chain - ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 1 305 1 305 309 422 76.0 1e-118 MSIDIEVGTKVTVQVPASSANLGPGYDTLGIALSLYDTVEVEVTRSGLEVEIFGEGAEEL PRDGSHLVVKAIRSALKAADVEVTGLRVVCTNNIPQSRGLGSSASAAVAGVAAGNGLAGF PLSEEQVVQLSSAFEGHPDNAAASVLGNAVVSWTTVPVDGRSLPEYRAATLEVHPSIKAT ALVPDFHASTQAVRRVLPSHVTHADAAFNVSRTAVNVAALTAYPDLLWEGTRDRLHQPYR ADVLPVTAEWVNRLRNRGYAAYLSGAGPTVMVLHTEPIEEAILDDAREQNLRVLELEVAG PVSVERG >gi|227860913|gb|ACLH01000007.1| GENE 4 3362 - 4687 1588 441 aa, chain - ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 9 439 13 442 445 540 71.0 1e-153 MTTTNRSKKPEGEPVGIALLGFGTVGAEVFRLVQENADAFAHRIGGPVEIRGVAVHNKNK LRPGVPEELLTDYAKALVLRDDIDLVVEVIGGIDFPRELVLAALNAGKSVVTANKALVAA HADELAEAADRADVDLYFEAAVAAAIPVVGMLRRSLAGDKIQRISGIVNGTTNFILDAME STGASYEDALAEATRLGYAEADPTADVEGHDAASKAAILASLGFYTRLTFDDVYCEGISK ITADDITAANQAGYSIKLLAICERLVDEETGAESVNARVHPTLVPKEHPLASVSQSYNAI FVEAEAAGSLMFYGNGAGGNPTASAVLGDVIGAARNIVHGGRAPGENTYANLPIAEFGEV ETRYHVDMEVEDRTGVLSAISGVFARHGVSLRTVRQEDGDATARLIVVTHAAKEAVLEDI VAALGELDEVKAVHSVIRLGV >gi|227860913|gb|ACLH01000007.1| GENE 5 4839 - 6176 1639 445 aa, chain - ## HITS:1 COG:Cgl1154 KEGG:ns NR:ns ## COG: Cgl1154 COG0019 # Protein_GI_number: 19552404 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Corynebacterium glutamicum # 3 443 6 444 445 581 67.0 1e-165 MTDFNSLPAHVWPRNAARGSDGVVSIGGVSLTELAEEYGTPLYVFDEQDFRSRCRDMAQA FGGPDHVHYASKAFITKRIVRWVDEEGLCLDVASLNEAKLALAADFPPERMTAHGNNKED EYLELCVNEGIGHVVLDNAEELSRLNSIAAAAGRVQPVMIRVKPGVDAHTHEFIATAHED QKFGISLSTGAAFEVARTVLESANLKLVGLHCHVGSSVFNADGFKLAAERVLSLYKRIHS ELGVALEELDLGGGFGIPYMEYEEALDVATLAKDLLDAVERTATELGIKPPFVLVEPGRS LVGASAVTVYRVGTVKDVETGKADLPMRRYLSVDGGMSDNIRPALYGSEYDVRVVNRRTQ GEPVDSRIVGFHCESGDILVNERRFPSDITTGDLLAFATTGAYQYMMASRYNGALRPAVV SVRDGKASLMLRRETMEDLLALDVD >gi|227860913|gb|ACLH01000007.1| GENE 6 6189 - 7850 2311 553 aa, chain - ## HITS:1 COG:Cgl1153 KEGG:ns NR:ns ## COG: Cgl1153 COG0018 # Protein_GI_number: 19552403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 553 1 550 550 793 77.0 0 MNPEDLSVLIKNTAAAVLTEHELDASVLPETVTVERPRNPEHGDYATNLALQVAKKAGAQ PRELAQWLADALAGNDAIDEASIAGPGFLNIRLAAAAQGAIVAQVLNAGADFGSNTTYQG KKINLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFARS LVAAAKGEPTPEDGYGGGYIKEIAQGVLEQNPGALDGSDAEVQEAFRSAGVEMMFAQIKE SLHEFGVDFDVYFHENSLFESGAVEKSIQKLKDNGKLYEAEGAWWLKSTEYGDDKDRVVI KSDGNAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYIARLRASAQALGYDPDAVEVLI GQMVNLVRDGKAVKMSKRAGTVITLDDLVEAIGVDGARYSLVRSSVDSSLDIDLGLWASQ SADNPVYYVQYGHARICSILRKAAELGFDTAALADAPLDLLTHDKEGDLIRTLGEFPEVV ATAATLREPHRIARYAEELAAVFHRFYDQCQVLPKAGEETEPIHSARLALASATRQVMSN ALTTVGVSAPEKM >gi|227860913|gb|ACLH01000007.1| GENE 7 8087 - 8960 1089 291 aa, chain + ## HITS:1 COG:yghK KEGG:ns NR:ns ## COG: yghK COG1620 # Protein_GI_number: 16130875 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli K12 # 13 281 12 276 560 199 44.0 3e-51 MSTFNITTDAIAGNVGLTALVSTLPLIAFFIMLLGLKARAHTSGAVALLVAVLIAIFGMG MPTGMALSSAMRGGLFGLFPIVWVIITAIWFYEVTVASGRFNDLRKTFDLLGDGDIRIQA ILIAFCFGGLLEALAGFGAPVAITATMILALGVKPLKAATTVLIANTAPVAFGAVGIPVT TAGSVGGRTAEQTADIAGLISLQVLLIAAVVPFFILFILDGMRGVKEAGPAAAVIGISFA IAQWAAATFFAYQLTNVVACIVSLGAGFIFLRVWKPKGVDSLRERMELPAQ Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:01:23 2011 Seq name: gi|227860912|gb|ACLH01000008.1| Corynebacterium aurimucosum ATCC 700975 contig00008, whole genome shotgun sequence Length of sequence - 884 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 777 1162 ## COG1620 L-lactate permease Predicted protein(s) >gi|227860912|gb|ACLH01000008.1| GENE 1 1 - 777 1162 258 aa, chain + ## HITS:1 COG:BS_yvfH KEGG:ns NR:ns ## COG: BS_yvfH COG1620 # Protein_GI_number: 16080472 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Bacillus subtilis # 44 258 358 563 563 148 40.0 1e-35 EVTDLNGSRIWMALLPYAVVTAVFAIATAWPAIFGFLQLDVAWPLLDGTVFDAEGQAMDT AFTFNVLGNPGTLLLISGIIVAVIYMSFNENGRYKLEASAPLAKFGEVISRMKFSALTII LVLALAYTMNYSGQTISIGQFVASVGGIFALFSPVLGWIGTAVTGSDTSANALFANLQVT AAERIGVNPDLMLAANTSGGVVGKMISPQSLAIAATAVQMEGEESRIFKAVVGYSVAFLA VVCVIVFLMSNVLGFLVP Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:01:35 2011 Seq name: gi|227860911|gb|ACLH01000009.1| Corynebacterium aurimucosum ATCC 700975 contig00009, whole genome shotgun sequence Length of sequence - 37737 bp Number of predicted genes - 30, with homology - 29 Number of transcription units - 16, operones - 6 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 86 - 235 86 ## + Prom 34 - 93 2.5 2 2 Op 1 17/0.000 + CDS 207 - 992 1014 ## COG0247 Fe-S oxidoreductase 3 2 Op 2 13/0.000 + CDS 992 - 2497 1866 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 4 2 Op 3 . + CDS 2494 - 3123 780 ## COG1556 Uncharacterized conserved protein 5 3 Tu 1 . + CDS 3228 - 4823 1747 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 4896 - 4930 -1.0 + TRNA 4962 - 5035 72.2 # Arg CCG 0 0 - Term 5134 - 5160 -0.6 6 4 Tu 1 . - CDS 5238 - 5678 371 ## cauri_1038 hypothetical protein - Term 5966 - 6019 14.1 7 5 Op 1 . - CDS 6065 - 6274 358 ## cauri_1037 hypothetical protein - Prom 6371 - 6430 2.4 8 5 Op 2 . - CDS 6455 - 6748 415 ## cauri_1036 hypothetical protein 9 5 Op 3 . - CDS 6814 - 7323 557 ## COG1846 Transcriptional regulators 10 5 Op 4 . - CDS 7348 - 9933 2468 ## cauri_1034 hypothetical protein 11 5 Op 5 . - CDS 9937 - 11061 1310 ## COG0420 DNA repair exonuclease 12 5 Op 6 6/0.000 - CDS 11126 - 11959 824 ## COG4279 Uncharacterized conserved protein 13 5 Op 7 . - CDS 11960 - 15154 3318 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family + Prom 15196 - 15255 2.8 14 6 Tu 1 . + CDS 15305 - 16837 2447 ## COG0591 Na+/proline symporter + Term 16875 - 16925 13.9 15 7 Op 1 . + CDS 17174 - 17716 559 ## cauri_1029 hypothetical protein 16 7 Op 2 . + CDS 17764 - 18207 717 ## cauri_1028 hypothetical protein + Term 18238 - 18276 6.5 - Term 18220 - 18269 12.4 17 8 Tu 1 . - CDS 18308 - 20317 2487 ## COG0513 Superfamily II DNA and RNA helicases - Prom 20554 - 20613 1.8 18 9 Op 1 5/0.000 - CDS 20688 - 21866 1508 ## COG1228 Imidazolonepropionase and related amidohydrolases 19 9 Op 2 . - CDS 21888 - 23564 2317 ## COG2987 Urocanate hydratase 20 10 Tu 1 . - CDS 23924 - 24823 315 ## cauri_1024 hypothetical protein - Prom 24903 - 24962 1.9 - Term 25028 - 25063 6.5 21 11 Tu 1 . - CDS 25073 - 26626 2167 ## COG2986 Histidine ammonia-lyase - Prom 26708 - 26767 1.9 22 12 Op 1 . - CDS 26809 - 27537 576 ## COG1414 Transcriptional regulator 23 12 Op 2 . - CDS 27574 - 28920 1713 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 29058 - 29117 3.1 24 13 Op 1 . + CDS 29284 - 30699 1592 ## COG1113 Gamma-aminobutyrate permease and related permeases 25 13 Op 2 . + CDS 30702 - 31670 1179 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 26 13 Op 3 3/0.000 + CDS 31704 - 32096 352 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 27 13 Op 4 . + CDS 32093 - 35209 2189 ## COG1061 DNA or RNA helicases of superfamily II + Term 35354 - 35407 -0.8 28 14 Tu 1 . - CDS 35502 - 36686 1034 ## COG0477 Permeases of the major facilitator superfamily + Prom 36681 - 36740 2.8 29 15 Tu 1 . + CDS 36832 - 37353 386 ## cauri_1015 hypothetical protein + Term 37528 - 37554 -0.6 30 16 Tu 1 . - CDS 37546 - 37713 84 ## cauri_1014 putative transposase Predicted protein(s) >gi|227860911|gb|ACLH01000009.1| GENE 1 86 - 235 86 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQVENNAIRIRVCSLVCLFAACPVLGTAMLYSDAGYQDSRSGHFSSLYL >gi|227860911|gb|ACLH01000009.1| GENE 2 207 - 992 1014 261 aa, chain + ## HITS:1 COG:DR1907 KEGG:ns NR:ns ## COG: DR1907 COG0247 # Protein_GI_number: 15806907 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Deinococcus radiodurans # 1 244 1 242 247 255 52.0 7e-68 MRIALFSTCIGDSLFPDAHKATALILSRLGYDVVFPEEQTCCGQMHINTGYQEQTLGMIR TYADAFADPSIDYVVSASGSCVGAVREQHEMIADRFGTSADVDGAKKAAGKTLDLPEFLV DVAGVTNVGAFFPHRVTYHPSCHGLRFLKLGDRPYQLLKEVEGIDLAPLPNAEECCGFGG TFALKNAEVSAAMVGDKTRHIRETEAEYVTGGDSSCLMNIGGALARQRSGVRAIHLAEIL ASTKEHPWTPTSAAYSKEKML >gi|227860911|gb|ACLH01000009.1| GENE 3 992 - 2497 1866 501 aa, chain + ## HITS:1 COG:DR1908 KEGG:ns NR:ns ## COG: DR1908 COG1139 # Protein_GI_number: 15807655 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Deinococcus radiodurans # 16 356 4 343 347 403 57.0 1e-112 MTSFLDTTPPRAPEGYGNLRGSKAFVPLAHVGLNNATQRRNLHHATTTIRDKRQHAVDET PDWEQLRDAGSALKDDVAVRMGELLLQFEEQVTKRGGIVHWARDAKEANEIIEGLIRETG ETDVVKIKSMATQEIALNEHLEEAGIHAQETDLAELIVQLGEDKPSHILVPAIHRNRAEI RDIFVNEMPNTDDSLKAEPAELAEASRQFLREQFMKAKVAISGANFGVAETGTINIVESE GNGRMCLTLPETLITVMGIEKLVPTFQDLEVFLQLLPRSSTAERMNPYTSMWSGVTEGDG PQNFHIVLLDNGRTAALSSPKGHEALKCIRCSACLNVCPVYERAGGHAYGSVYPGPIGIS LTPQLTGMKDHNDPSASLPYACSLCGRCDEVCPVRIPLSQVILENRYQKVTNATPPVEEK LFQVVELVWKNPKIWNQITHMVALGRVLGGFNGVIDKLPLFMSGWSEVRDTAVPPKKSFR QWFDTDEAQELLAQAKKEGIK >gi|227860911|gb|ACLH01000009.1| GENE 4 2494 - 3123 780 209 aa, chain + ## HITS:1 COG:DR1909 KEGG:ns NR:ns ## COG: DR1909 COG1556 # Protein_GI_number: 15806908 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 9 208 18 211 212 108 37.0 7e-24 MTTAKEEILNRISAAQKQAGLPDHVDIPREYQKEGTLNEEELRDMLVDRLEDYKADVHVT DESGLNSTLVGILKERGCSNVVYAPGMDAGLLDGFEGTITPDDNAKDPRELDAVDAVVTE SHVTSAQTGTIVLESNETCGRRALTLVPDRHVCIVRKDQIVYGVPEMVSRMNPERPATWI SGPSATSDIELSRVEGVHGPRDLIVVIVK >gi|227860911|gb|ACLH01000009.1| GENE 5 3228 - 4823 1747 531 aa, chain + ## HITS:1 COG:Cgl1152 KEGG:ns NR:ns ## COG: Cgl1152 COG0596 # Protein_GI_number: 19552402 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 29 526 5 500 502 427 46.0 1e-119 MRLSRVLGSVLGPVAVAAGLVAAPAVAHADQPTIKWGPCPEGVTEERAECGHVTAPTYHD APEKGTIDVGLIRLKATGNRQGTLFTNPGGPGGDAYGWVSSAAWPEEIKQGYDIIGVQPR GLRESGEVNCTSSEVGGNPLAQLTKIGAITRDDCEKNTPGYTDSLTTENTAKDWEVVRQA LGEEKINIAGLSYGTFLGSTYATLYPQHTDKVVLDSGMNPNMAWNQIFASQQAGYENALH DFFAYVAKNDATYHAGKTPLKAYERWSQIVAKEAGVRPTVLPPNAQIGDLPPGLEFAGQP GANVMTATGELRVQAEHLAGKVRNPQAVQASSQTLSATRELLPRPETWDALAKHIGGVEP INFEEQAAQQPQQDPEKAQQQLVNAMSMQNIIMCNENTAPTDPTLIPAFLWSNYVTIDPF TLFNSMYASGAGCGGRAPVNTPIAVSGANLQTKPLQIQATGDPQTPYAFYRGLSDPMQSR VVTVHGPGHGHFAMGNKAVDQIVVDYLRTGEVHTADAPGFFDQPQTQEQPA >gi|227860911|gb|ACLH01000009.1| GENE 6 5238 - 5678 371 146 aa, chain - ## HITS:1 COG:no KEGG:cauri_1038 NR:ns ## KEGG: cauri_1038 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 1 146 146 238 100.0 5e-62 MDSRIYVRYLNGPLLWLGIIVGLAVVAAVVPTMVDSTWAAILFGALVLAATVACILMRVK IVVSDDDVAVSILGIFAKRIPLSDITGASVGPETGLKEGAGPRVVDGAPAYIVSGPTVRI EQGRSSLLASAKNPEEVAADIKARLR >gi|227860911|gb|ACLH01000009.1| GENE 7 6065 - 6274 358 69 aa, chain - ## HITS:1 COG:no KEGG:cauri_1037 NR:ns ## KEGG: cauri_1037 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 69 1 69 69 125 100.0 7e-28 MSVERDLAQEQREAAARDKADGWVSVFVEWIPSMLLSVVMVGAMMLGMYYVEHGTLDITQ PIVNQHITQ >gi|227860911|gb|ACLH01000009.1| GENE 8 6455 - 6748 415 97 aa, chain - ## HITS:1 COG:no KEGG:cauri_1036 NR:ns ## KEGG: cauri_1036 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 97 1 97 97 159 100.0 3e-38 MMGQELFEHPQRQYATYGITPLKELSAQVGPVEDLEELTEEQATALEAALEQHPEGALTF DDASQLWIIGAEDDIERMFQDREDFVEALNNNEDPGV >gi|227860911|gb|ACLH01000009.1| GENE 9 6814 - 7323 557 169 aa, chain - ## HITS:1 COG:Cgl1145 KEGG:ns NR:ns ## COG: Cgl1145 COG1846 # Protein_GI_number: 19552395 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 6 150 5 149 162 156 53.0 2e-38 MTADTRWLTESEQDLWRHILASIRKINRGMEETLLACSDISAAEFAVLVSLSEAPEHTLR LRELCSALDWDRSRASHQITRMEKRGLVCKEKCAGDARGVEVVMTKAGQERLEAAVPEHV ESVRRMVFDHLEPDDVPALLRFCKGVLSENNLPGYDGFVPDERLGLHAD >gi|227860911|gb|ACLH01000009.1| GENE 10 7348 - 9933 2468 861 aa, chain - ## HITS:1 COG:no KEGG:cauri_1034 NR:ns ## KEGG: cauri_1034 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 861 1 861 861 1127 100.0 0 MMQLHSVELNNVRGVEHLEVKDLPETGVVVIGGPNEAGKSTLVEAIDFVLTEKHTANSKP VRALQPAGRDVGPEVTLEATVGPYRFRIRKRWVKKRTSELHVFSPRPGQWTGAEADGELD RILSEHVDRALLDALFVRQDDPHQGIAAVGIPSLTAALEEETGASSAAEDSELLTRIEAE YKEYFTAKTDKPAGDYKSAIAALAEAEEKHAAAEAALRELDGVVERYEAAELKKAEAEAA LPAAAEECERRDGELLAARAAQEKVTAQEAAVTRAAEAVTRAEAEAERRKAVVAEHAAAV NAAERATAAVMEARERAEEEAAARRKLEEERAEVHQRYEAVREERQRARRAQQRAERAAL GTRLETLNKLEETLASRRRELAATPDVPNLQALEDAAREVTVQERLRAAAAAKLYFSGEG SFSVDGEERALESGTELAVELREGTTLKVGDITARYVAGAGDSGEEGVEKARAELARLLE DAGCEDLESARATHEKHADLASAADTAVRELAAALGGENLGELRARFEAGAADADGTEVD GGTTDSAAKLRELDIVEQEEEELRRKLDELDRALAPYRENKAGAALEVAMVRAEEATAQR DAQAAALEAVRAQLSDAEVSAAIEAARTELAKEKAALEEMSTVDVDTAEQLARGAHTHVD SLNAAVNAAVGDMREFNGLITMHSGAAEDAEKAAAELEVARERHAAIERRANAARYLRTL MLRHRDAARQRYAAPFVAALNGLARTVFGGDVDFELSEELKVQARSRNGETVSFDALSGG AKEQLSILTRFAIAQLVSGEPVPVVIDDALGSTDSQRLQLMAALFSKAGKNTQVIVLTCM PQRYSWVPGRMDLDMERLTSA >gi|227860911|gb|ACLH01000009.1| GENE 11 9937 - 11061 1310 374 aa, chain - ## HITS:1 COG:Cgl1140 KEGG:ns NR:ns ## COG: Cgl1140 COG0420 # Protein_GI_number: 19552390 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Corynebacterium glutamicum # 16 370 1 362 365 325 52.0 8e-89 MAAVTFIHTSDFQLGMTRWFLNPAAQSRFDDDREAAVLRLGELATETGAEFIVVAGDVFE HNALSKSTLLRAKDMFKRLPVPVYLLPGNHDPLVADSIFFNSFADNVHVIADSEPIEVRL GVEIVGAPYLSKRANYDLVRRALEPLQPLEKGAVRIAVGHGQVESRAGVGEDSDADTIDL AFVEECLDKGVIDYLALGDTHSTESLGRSGKVWFSGSPETTAFDDRERDSGNALVVTVEG DQVDVVKHRVGRWDFRAIDADVDSLEEVEAFLAELETVPEKIRTAVKYSLRGTVGLSAQA RLEQGLAEKEEVFASLKPRERTMDLHLAPSEEELSELSLSGYAADALAELLEDLDNPTAR DAANLLFRLSAKGA >gi|227860911|gb|ACLH01000009.1| GENE 12 11126 - 11959 824 277 aa, chain - ## HITS:1 COG:Cgl1139 KEGG:ns NR:ns ## COG: Cgl1139 COG4279 # Protein_GI_number: 19552389 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 9 272 10 264 284 208 43.0 1e-53 MAPKNPEDNNVIYANFGTRKRVSTPEEVNRVDRVRTMQPAATRLLNFVNQQTDSGRIRRG RQYATEGHVVGLDVRNGAVHGKVAGSQNEPFAVLIQVPYRNNEDIGRLSEMFARTPNSVA KAREGMLADASLDILIAEYPDDLRFSCTCPDPEYVCKHVVAVADRLAARMDADPSVIFAL RGLDFARLEQAVMEQAKAASEDSFSASAASEISAEERNALFWEGRELPPLPEPKTAPAVD DSDPELLRKAMRSVSHTNIDLLRAVSDVEDLYYHLTH >gi|227860911|gb|ACLH01000009.1| GENE 13 11960 - 15154 3318 1064 aa, chain - ## HITS:1 COG:Cgl1138 KEGG:ns NR:ns ## COG: Cgl1138 COG0553 # Protein_GI_number: 19552388 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 42 1063 1 1030 1034 1238 61.0 0 MYGLTGVTPLYNETVTIAYLGRIRELSATPTPKRRAAKLAPMASYLLHGLWLPVSGLSLW IEQVEGHKIIMPSAVPEGTFPDVVDSILSKKTFRNRARVSLRTPKGKDVSLMVPMAMFAP DEAVETLAKLEYLDTDSQAATPEQRATIAPDLLWLIRAYRGLYRFVRAGRVTIRLSYQAG EWYPMWQLASGLGERSWLAEMLASAPGILSINNRALSDDLADELTHWIAYTQLRPQIDAP RAAPWHDFAQALLKTAPVKKGRAQLLRGLNEWKDSITSVDLQLVFLVEEPPNENVSVEDA AWPIRLLVRSGTDSPLPVRQEQLDRGSVEKLREARRHAFDVAPRLKYNSAPASRNAGDWD VYLTTEQLVDFVTHDAAALRKAGFTVLLPKSWSHMETKAKLETTEVRDPADAATKAHIGM EKLFSYDWKLSVGDTQLTDAEMQELISSKSGLIRLRGEWVMADTQALNKISQYMRELADT ARKRALKELEQLAATAEMARQLEQSGWEELVAEVERRRKEFNEGEQEEAVTLADLREMAL KSMAEDPVAFTGSEWHTSLLGGLDSTAPDRVEIPDTVHAELREYQRRGVDWLYWMSRNNI GAVLADDMGLGKTLQLLSLLAVEKAAHEAEGEAEAWKPTLVVAPTSVVGNWAREAKRFVP DFKVMVQHGTGRLKGEELVTAAQNADIVITSYGTVSRDFLTLSKVEWDRVVLDEAQAIKN ASTRSSKAVRAIPSRHRVALTGTPIENRLSEMRSILDYCNPGILGSASFFRNHFAKAIER EGSDVMAERLRLLTGPFILRRLKTDPNIIDDLPEKSEQIITVRMTDEQAALYKALVNDVE QALAKKKKGISRRGLILASLTRIKQICNHPAHFLADGSPVTIKGKHRSGKVEELMRIIDQ AIESSERALIFTQYKAFGDVLQPYLSEQLGCEIPFFHGGVSKNRRDQMVEEFQAEDGAPV MLLSLKAGGTGLNLTAASIVVHMDRWWNPAVENQATDRAFRIGQQRNVQVYKMITAGTLE ESIQDILDGKTQLAGAVVGEGEGWLTELSPEQLADLMSYREQEK >gi|227860911|gb|ACLH01000009.1| GENE 14 15305 - 16837 2447 510 aa, chain + ## HITS:1 COG:Cgl1137 KEGG:ns NR:ns ## COG: Cgl1137 COG0591 # Protein_GI_number: 19552387 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Corynebacterium glutamicum # 1 510 11 522 524 630 69.0 1e-180 MIIYLLAMAAIGFWSYKQTDEYDDYVLAGRGLHPFVAALSAGASDMSGWLLMGLPGALFL TGMSELWMAIGLLIGAWANWKWVAPRLRSYSEIAGNSITVPSFFENRLHDKSRLLRIIAA AIIIFFFTFYVSSGMVAGGRYFESSFGGDYMVGMLVVAAVTVFYTFVGGFLAVSYTDTVQ GLLMFASLIIVPIMVLFSLDNPGDIFSFAAENPYATGGVIENPNYFSLFSGVSAAVIIGN LAWGLGYFGQPHIIVRFMALRKPSDARAGRFYGVSWMGISLIGAIFVALSGTVFFTETNH SITDQENYETIFLDMAQVMFHPLFAGLVLTAVLAAIMSTMSSQMLVVSTSLIEDLYLIFA KKKPRQEVLINLSRTAVVAIAVIAAVLAINPSDSILGLVGFAWAGFGSAFGPLVLLSLYW KRLNSTGAIAGMITGAVVAIGWGMSPLGDTLYELVPGFISALLVTVGVSLATKAPDEKVT QEFEEASRLAKLVEENDDLDFEEAAEKVQK >gi|227860911|gb|ACLH01000009.1| GENE 15 17174 - 17716 559 180 aa, chain + ## HITS:1 COG:no KEGG:cauri_1029 NR:ns ## KEGG: cauri_1029 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 180 1 180 180 341 100.0 1e-92 MNLRAAYIGFLSIATVAYGGYHLLPGPDLGVATVPARVEAPGYDRDDFGGWAPGTRDNVK EAQTIGGTLYDPYARAPAPARVEVDHVFPLSAAWDLGASAWPRDKKMAFANDPLNLVATA RNLNQAKSDSLPADWLPPADRCDYSQRLAAVARKYQLPLPSRDYAVMRYQCRFDFISQHR >gi|227860911|gb|ACLH01000009.1| GENE 16 17764 - 18207 717 147 aa, chain + ## HITS:1 COG:no KEGG:cauri_1028 NR:ns ## KEGG: cauri_1028 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 147 1 147 147 191 100.0 6e-48 MTSLLIFLHAFAAILLVGTVCISTSVFPAQLAKAGAGDASAAGAAGILNKITSTYGYISA IVPVIGLAVFLTDLATYKSEVQFHIALLLSVIAWVILLVVVIPKQNQAMAAIANPGSADV TKLKKQLSMFSGIFNLLWVICAILMYV >gi|227860911|gb|ACLH01000009.1| GENE 17 18308 - 20317 2487 669 aa, chain - ## HITS:1 COG:Cgl1130 KEGG:ns NR:ns ## COG: Cgl1130 COG0513 # Protein_GI_number: 19552380 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 1 623 1 662 732 753 66.0 0 MSITDNATGGVNEPEEFNKSESQENSQGGEALDASQVSNQDTGAANNPEDTGAEETSAND NSQGFAHLGLPDDVQEAVSKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALP VLSQIDTEARYPQALVLAPTRELALQVADSFQSFADHLGRIEVLPIYGGQAYGIQLSGLR RGAQIIVGTPGRVIDHLEKGSLDISQLRFLVLDEADEMLNMGFQEDVERILEDTPEDKQV ALFSATMPNSIRRLSKQYLNNPAEVTVKSERRTNDNITQRFLLTPHRHKMDAFTRILEVI DYDAIIVFCRTKHATEDVADSLKEAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATD VAARGLDVDRITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERV TNARLEEMDLPTADEVNAKRKEKFFASIGASQQDKQFDFFRDMVREYSAAENVAMDDIAA ALAVQLQGGTDFLLKERPVSKKDRRERDRFERDGRGRDRGDRGRDRGGRERDRGPRRPDG DFETYRLDVGKRQNVRPGAIVGALANEGGLSSKDFGRITIAVGHTLVDLPKNLDPAVLER LKDTRISGQLIKIQKDTGRPPRRNYDDDRGRGGYGGRGRGGRGERGGYRDRDRGGHGCDR GGRRGGWRD >gi|227860911|gb|ACLH01000009.1| GENE 18 20688 - 21866 1508 392 aa, chain - ## HITS:1 COG:FN0740 KEGG:ns NR:ns ## COG: FN0740 COG1228 # Protein_GI_number: 19704075 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Fusobacterium nucleatum # 45 392 60 410 413 202 34.0 8e-52 MSTLFTGISELRTVSEAGTLADASLIANTDGTIAWIGPASEAPAADEKVDLGGRAVLPGW VDSHTHMIFDGDRSAEFEARMAGESYQAGGIAVTMDATRSAGEERLEKLLVERIAAARRG GTTTLETKTGYGLNTASEVEAARVAARHVDDVTFLGAHLVPPGAEAETYLDEVVGPMLDG VAEHVQWIDVFCERGAFDEEQSRRVLEAGKARGLGVRVHGNQLGEGPGVALAVELGAASV DHVNYLSDADVEALASSETVATLLPACDLSTREPLAPGRKLIDAGATVAIASNLNPGTSY TSSMNFCVTTAVLQQHLTLDEAIAAGTLGGATALRRQDVGEGKDAKGRPAKGSLVVGAAA DLHVLDAPSAIHLAYRPGMPMTFKTFVGGREV >gi|227860911|gb|ACLH01000009.1| GENE 19 21888 - 23564 2317 558 aa, chain - ## HITS:1 COG:PA5100 KEGG:ns NR:ns ## COG: PA5100 COG2987 # Protein_GI_number: 15600293 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Pseudomonas aeruginosa # 6 552 11 554 559 694 60.0 0 MSEPREVRAPRGTEITAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRAARSWEAF DAIVESLKDLESDETLLVQSGKPVGIWKTNEWAPRVLIANSNLVGDWANWEHFRKLEDEG LMMYGQMTAGSWIYIATQGILQGTFETFAAVAKKRFNGTLAGTFTLTGGCGGMGGAQPLS VTLNGGACLIVDVDETRLKRRQSKRYLDEVVTDLDEALKLVLDAKENKKPLSVGLVGNAA EVFPEVLRRQRAGEFTVDIVTDQTSAHDPLSYLPTEITVEDWHNEAKADPTTFTKKAREA MAAQVQAMVEFQDEGAEVFDYGNSIRDEARKAGYQRAFEFPGFVPAYIRPLFCEGLGPFR WAALSGDPEDIKVTDQALKELFPDNEHLHNWLDAAEEYVEFEGLPARICWLGYNERHKAG LLFNDLVKEGKIKAPIVIGRDHLDSGSVASPYRETEAMLDGTDAVADWPLLNAMTAVSSG ATWVSLHHGGGVGMGRSIHAGQVTVADGTELAAAKLRAVLTNDPGMGVIRHVDSGYTRAK EVADERGVRIPMEFKARD >gi|227860911|gb|ACLH01000009.1| GENE 20 23924 - 24823 315 299 aa, chain - ## HITS:1 COG:no KEGG:cauri_1024 NR:ns ## KEGG: cauri_1024 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 299 1 299 299 585 100.0 1e-166 MNNEQLFNFLDQHLIDLRKLPNDDPRWKKVHAGKVAKMAWCFVLPMMHWHELKPWQKETA KAYVLGLTLPKATLVGKSAALIHGIPLVVPPAEWEATLPSNSVPPRAKANARYRRMDLRG NETVVHGIRVSTLERTAIDIARFYGFEEGLVAVDAVRARNVGQFGINETLGAMGRVKGVA AARRAVAESVNCAESPWESYARALILAADYPELRWVKAQYVIEKYRADLVINGWLVIEID GNVKYRNEIEEVIRAEHRRQQAILNKGYIVLRFSPEQLSSRPDYFQETVGKHLARGPRL >gi|227860911|gb|ACLH01000009.1| GENE 21 25073 - 26626 2167 517 aa, chain - ## HITS:1 COG:FN1406 KEGG:ns NR:ns ## COG: FN1406 COG2986 # Protein_GI_number: 19704738 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Fusobacterium nucleatum # 16 517 12 511 511 373 41.0 1e-103 MSNSYPSTVTVGIGALSIEEVVAVARYGAPVEISQDALEEIASTRERVEELAQDPTPVYG ISTGFGALARRHIPEEMRAQLQLSLVRSHAAGTGPEVEQEVVRALMLLRLSTLCTGRTGV RPVVAQTYAAVLNANIHPVVREYGSLGCSGDLAPLAHCALALLGEGEVRVDGGDITPAAE ALAAAGIEPLKLREKEGLALINGTDGMLGQLCLAITDLRELAKAADIATAMTVEGLLGTL VVFADDLQQLRPHPGQADAAANILQVAEGSEILAAALEEFKKKQVQDAYSVRCAPQVAGG FRDTLAHTALVAERELAAAVDNPVVAKDGRVVSNGNFHGAPVAYALDFLAIVVADLASIS ERRTDRFLDVARNRGLNAFLADDPGVDSGHMIAQYAQAGIVSELKRLANPSSADSIPSSA MQEDHVSMGWSGARKLRKAVDGLQRVLAIEILTAARAIDMREGQPAKGTGAVIDALRQTV QGPGTDRYLSPEIEETVRLVKEGALVAAVEGAVGKLR >gi|227860911|gb|ACLH01000009.1| GENE 22 26809 - 27537 576 242 aa, chain - ## HITS:1 COG:YPO1714 KEGG:ns NR:ns ## COG: YPO1714 COG1414 # Protein_GI_number: 16121974 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 26 238 32 256 263 73 24.0 3e-13 MSTSRVPAARNALEILRLLSTIDVPISAARIRSELDLPRSTTYHLLKEMVDAGFVVHLPE NQTYGLGLAAYSMAAAYATQQPLVRATQGHLERIASSVGGSGHLSRLAGSEILYLNEVRA PGALSLVTERGVRLQAQRTASGRAMLALLPEAEWKAAFFPGSLGFGEYKEILRQVRERGW AEEVEVVARGQASVGVAVVDHVGRPAAALAVTFPVGTADATDVAQQLHAAAQQVAKRMYG RR >gi|227860911|gb|ACLH01000009.1| GENE 23 27574 - 28920 1713 448 aa, chain - ## HITS:1 COG:SA0308 KEGG:ns NR:ns ## COG: SA0308 COG3314 # Protein_GI_number: 15926021 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 12 447 4 435 437 381 47.0 1e-105 MNSEDAIVDAFYESDDDAPSKKGIWRLFVYSAIGAFVFFFPISYDGKKSIPLDHMVTIIR TYADVLVSWFILALALYGTVRSIVNKNWREGPLQAVFTALNVVGLVVSFLMVIGKLPGVL GNEDIVPFLWNSIATPVGLIVPIGGAFLALLISYGLLEFVGVFMQPIMRPLWRTPGRSAI DAVASFVGSYSLGILITDRVYQRGGYTAREASIIATGFSTVSAAFMVIVAKQLDLMDMWG IYFAVSLVVTFLVTAITVWIPPLSRIPDDYVDGVEPDPEKPVKGNFFKAAWREALLALDR APSLGVAIWENLRDGVRMASAIVPSIMSVGLIGLLLANFTPLFDWLGYLFYPFAWLVQLP EPELAGKAAAMGIAEMFLPATAVAGSESMVLKFVIGVVAISAIIFFSALVPCILATKIPI KLWQIVVIWFERVVLTIIITTPIAFLVT >gi|227860911|gb|ACLH01000009.1| GENE 24 29284 - 30699 1592 471 aa, chain + ## HITS:1 COG:Cgl1129 KEGG:ns NR:ns ## COG: Cgl1129 COG1113 # Protein_GI_number: 19552379 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Corynebacterium glutamicum # 10 451 13 456 468 586 73.0 1e-167 MAETTTKRPGLKHRHLHFIALGSAIGTGLFYGSAGAIQAAGPSVLLVYLLGGAVVYFLLR ALGEMSVHHPVTGSFAEYARTFLGPWAGYITGWMFAFEMVIVALADLTAIGVYMQFWFPG SPKWVWVAATLLLVGGANLATVKAFGELEFAFTIVKVGAVIAMILGGVAVLVFGLSTAET TGPANLVNDGGFFPNGVSGMVASFILVLFAFGGTEIVGVASAEAEDPAKSVPKAVNTIPV RILLFYVLAILVILMINPWRSITGEESPFVQIFSTLGVTWAAAALNVVVITAAVSAINAD LFGAGNVLTGLARQNLAPKVMAKKTRGVPVMTMIILLIVMIIGTGLNALIPDNVFEVIAS LATFATIYVWLMILLAHVASRRQMPTAERASLEYTVPFWPWGQYFSIAFIIFTFGIMVWQ EQYRPALATGVIFILLMTAIFYLTGRRSAAASSPQGTAPQDTAQQGTDAKG >gi|227860911|gb|ACLH01000009.1| GENE 25 30702 - 31670 1179 322 aa, chain + ## HITS:1 COG:PA3175 KEGG:ns NR:ns ## COG: PA3175 COG0010 # Protein_GI_number: 15598371 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Pseudomonas aeruginosa # 11 310 3 310 311 232 45.0 6e-61 MNTVDAPAYSPAPEWSGRSDGPGPEHARWHSVVRPLDVAKPQAQPGIALLGFASDEGVER NHGRPGAAAGPAALRSALGSLALHHTHALYDAGTITTQGTDLEGSHERLSDAVETLSRAG HLPIILGGGHETAFGSHRGAFRALGPLQIINLDAHFDLRTADVPTSGTPFKQISELVGRE DFDYSVLGISRPNNTPVLFDEASALGVTVVLDEELLTMDRAELRETVEDICAGTKPIHLS IDLDVLPAHQAPGVSAPAGLGVPVNIIRELALTIAATGRLALVDVVELNPTFDTDNHTAK LAARLIDDIVTAHFSAATKANS >gi|227860911|gb|ACLH01000009.1| GENE 26 31704 - 32096 352 130 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 130 1 130 131 142 53.0 1e-34 MSSPIRVVGAVFVDGNRFLACRKAAGKSLAGMWEFPGGKIEEGETPKQALAREIEEELSV IATVGDKVTTTVYEYDFATIELTTFLCTIESGDLTLSDHDAIRWVSPAEAQELDWAPADI PAVKLVSSRL >gi|227860911|gb|ACLH01000009.1| GENE 27 32093 - 35209 2189 1038 aa, chain + ## HITS:1 COG:FN1974_2 KEGG:ns NR:ns ## COG: FN1974_2 COG1061 # Protein_GI_number: 19705270 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Fusobacterium nucleatum # 285 720 8 418 761 249 34.0 2e-65 MSSDSLLPFGIYETPVTARIQERIEETKRARPTAALGIAHESTKDVNPRFAAAVSQHFAK ALEHKLTELSKPEERVALINGLAQHLGVDESISAEELLYAIYRSELEEAPKLPEVSLNSS ALFTNSVDDTNMSVEIAREIRTADSVDLLCAFIKTSGIAVISDELEYLRDRQIPLRVITS TYCGATEAAAVRRLVEDYGAEVRICYEHKTTRLHAKAWLFRRQSGFDTAFIGSSNLSRSA LVDGWEWNVRGSRSSTPEIIEKFIKTFDSYWYDTHFKAFDPDQDYERLKEALDSAKFLES KPGEKLELSGLRVEPYPYQEEMLEALDSEREVHDRHRNLLIAATGTGKTVVAALDYRRLS EKLGRRPRLLFIAHRREILTQAQRTYREVLSTAGFGELLVGDKQPDEWDHVFASIQSLHS RRLSKIAPEHFEVVVIDEFHHAEAPTYRAVLDYLQPRELLGLTATPERGDGENVQKYFDY RVAHELRLWDALRLQLLAPLHYYGVDDDTDLTSLTWNRGKKDYQVSELSEFYIKAGEKRT RFIINEINRRIFDLSDMKALGFCVSIAHAEYMAEQFTQFGIPSLAVSSKLSVDERRRAIE QLRQGTIKTIFAVDIFNEGVDIPAVNTLLLLRPTQSPVLFAQQLGRGLRLHEGKNACTVF DFLGVQHEEFDFEQRFKVLTAARGKNLAKEVEQGFPTAPPGSNITLDRVTTERVLKNIKR LARNSVKKIRALISDYGTTDLASFINSSGVPVEDIYRRKGITWTTLLRDEKLLPSSPTNK HEEFLLSRIRVLLHINDPHRVAVYSLLVSPDGPNEKEMTPEQTRYATMLVLALWANSNTR VPESLDEALHIIRVCPSFIAEVTQVMQLTLDRSRVIPEKSTNSVLETHADYSLAELVGAL DDGPLRKLANLPREGVRRFDASNTDLFLVTFQKDDNVSASTNYRDYPLAPDRLHWESQST TSLKSAMADRYIRHHELNGNIIIATRFTKRNKVDTASAYTFLGNVDYVTHRGEKPIQFEW SLRRDMPKQLYAAGRTVA >gi|227860911|gb|ACLH01000009.1| GENE 28 35502 - 36686 1034 394 aa, chain - ## HITS:1 COG:Cgl1113 KEGG:ns NR:ns ## COG: Cgl1113 COG0477 # Protein_GI_number: 19552363 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 1 380 21 401 405 377 59.0 1e-104 MVTAGFIIALGYGLIAPLLPQFIVSFDVSMAAAGLVVSVFSASRLVFAPAAGFLIDRVGT RRVYVTGLFTVAVTTGLVGVAQEYWQIVALRTIAGIGSTMFTVAAMGLIVRLAPPSIRGR CSATYATSFLLGNVIGPLVGASLSFLGFRWPFFIYGVGVAIAALVVWILMPSVNEADERR RHLTPMRLEEAWEDTAYRAVLTSNFAQGWINMGVRVAVLPLFAAAIFANGASTSGVALAA FAAGNAIVLQFSGSWSDRVGRRPLIVAGLVGSALFVGTLGLATNIVSLLILSALSGAASG LIAPSQQAAVADIVGSKRSGGQVLSTFQMAGDFGQILGPIVIGLLADKYGFETAFGFCAV VAAAGVVAWIFGRDTLGERKGILHGLRRRYRPRR >gi|227860911|gb|ACLH01000009.1| GENE 29 36832 - 37353 386 173 aa, chain + ## HITS:1 COG:no KEGG:cauri_1015 NR:ns ## KEGG: cauri_1015 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 64 173 1 110 110 186 99.0 4e-46 MKNYSSIHQSVPSPSTLSPGELTTEILYHHHETLRSMESIIRHPRSLARPTPQWRPPSKV LPPVAIEGRESLPLTFTVSRHRVGERAKARVLGYGEKRVPSYLITVRITDPTGRPVTPSL AEAWVRALVPEELVSAVHEISSSSAATFVWLVDSTYTPVHSPLSLFEGFSQAA >gi|227860911|gb|ACLH01000009.1| GENE 30 37546 - 37713 84 55 aa, chain - ## HITS:1 COG:no KEGG:cauri_1014 NR:ns ## KEGG: cauri_1014 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 55 426 480 480 108 100.0 6e-23 METRSGQSIKRLVRTLKKYRSFELVVGGETIHAAVPLPPDITATIQAITGRELPH Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:02:23 2011 Seq name: gi|227860910|gb|ACLH01000010.1| Corynebacterium aurimucosum ATCC 700975 contig00010, whole genome shotgun sequence Length of sequence - 8934 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 94 - 138 -0.2 1 1 Op 1 . - CDS 149 - 1000 550 ## cauri_1013 hypothetical protein 2 1 Op 2 . - CDS 1063 - 1938 1173 ## cauri_1012 hypothetical protein 3 1 Op 3 . - CDS 2015 - 3736 1526 ## COG2272 Carboxylesterase type B + Prom 3763 - 3822 1.9 4 2 Op 1 . + CDS 3852 - 4619 1053 ## cauri_1010 hypothetical protein 5 2 Op 2 . + CDS 4773 - 8474 5692 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes + Term 8523 - 8577 17.6 Predicted protein(s) >gi|227860910|gb|ACLH01000010.1| GENE 1 149 - 1000 550 283 aa, chain - ## HITS:1 COG:no KEGG:cauri_1013 NR:ns ## KEGG: cauri_1013 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 283 1 283 283 474 100.0 1e-132 MPDKKASRSQRLCVGSALVCAALAWVLSLNSSYGSGDYVFGSVLSTSVWGLTLLGALLFL AAQWRSLGHHAVLNPLLAVAVNLVLSSLIFNVNIPLYLDMMGTAFVAIVYGPVLGVGTAL LTACLASINNPLLLVYLPVAVVVAYLFGWLARRGAFKRMLVMMLTGAGVGVVAGLLTALC SLLLPGEYGQSGPVKLMALWELILHDGRLAVLLQSLSSDVIDKTFTALVVCVAIRLAPQY ILRLYDYPETRPSRDRVLTEDRFTLSLDEEPPRNLLGRIQRYF >gi|227860910|gb|ACLH01000010.1| GENE 2 1063 - 1938 1173 291 aa, chain - ## HITS:1 COG:no KEGG:cauri_1012 NR:ns ## KEGG: cauri_1012 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 291 20 310 310 328 100.0 2e-88 MSFFEDIASALDGEGIESRVNDDVMFVPITSDLEIQFVEIDPILPAANVYIAAADVDEDD EDFEAVLVSVAFSVEDAVEAVSRHIATDQVVTVLRDLLEGTDERIAELEFLQDEFNPNLV VAEVANDSELRVLVETIDGVPSAIVRFLSFDFDEEELDELEDEAISKLWEFDSPEDMSEE ERVAIFGDAEDEDGGLAPIIEVPAEALELGTYTDFDRLFDVLSLVSDQALDWEAQLVSID DSDFDEPEVYDIFGADDEDDDDVLFDDDDDDDDDYDEDEAEDADSDGDSED >gi|227860910|gb|ACLH01000010.1| GENE 3 2015 - 3736 1526 573 aa, chain - ## HITS:1 COG:Cgl1109 KEGG:ns NR:ns ## COG: Cgl1109 COG2272 # Protein_GI_number: 19552359 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Corynebacterium glutamicum # 106 567 2 458 481 554 58.0 1e-157 MSEFEPSPSREVSAAAARLLAESLHARARAAQEAARTALADDLTVLTTGGWVRGCIEEDL RPDRPISAPVRSWRGIPFGADTSGANRFMEPRPATAWEGIRDCREFGHVAPQPVYSWTDR IEGAEDCLTLDVVRPHHTGSPNTPSGFKAGEKLPVVVYLHGGSFIVGSSHMLMLRGFEFA AQMNVVYVSVNFRLGALGYLDLRSLGGEACANPAVADQVLALEWVRENIAAFGGDPDNVT LMGESAGGAAVLTLMAVPHAEGLFHRAIAQSPPIGMIHSRAQSVFWARELVHKMALPRDT TADDLRREDFADLVRSGQSMMWRAGELLYLNSCYAPTVDGDLIPQHPIEAFENGNQHPVP LLVGTNSGEASFGKFLFQRPSARERAALRLLASFDPESAPDVIAAYGGAVSRRDFGDLLT DALFWAPTVRVASEHARRHPTWMYRFDFAPAALRWLGLGAMHSMELSNIFGDPGASRVSF LNSIAKPSEMEDVTGAMQAQWGEFIRGGAPLDNWPHYRAPQRSTMVFDVEPRVEEAPMEG RRQAWEAYDMLEWGTGRPEILKELGFLLDEESY >gi|227860910|gb|ACLH01000010.1| GENE 4 3852 - 4619 1053 255 aa, chain + ## HITS:1 COG:no KEGG:cauri_1010 NR:ns ## KEGG: cauri_1010 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 255 1 255 255 429 100.0 1e-119 MLDKVFGKDDKGKAVSRREGSVDQAGTAESVGSLEVDEANRITKGFLGAIDKIVSVQSSV IINYVEGVKKRNPDASPAELQELIDKHFMNIITGTGAAAGASAAIPGIGLVTGAATIGAE SLVFLEAAAWYILASAHLRGDNIRDKERRRALVLVVLTGSQGSALVDTFVGDATSLSGVT SAATLSRFSGPTLSGLNGRLTKLFMKQATKKLKWAWVSKLLPMGVGAVLGTTANRKLGRQ VINHAGTQLSPLQGE >gi|227860910|gb|ACLH01000010.1| GENE 5 4773 - 8474 5692 1233 aa, chain + ## HITS:1 COG:Cgl1105_3 KEGG:ns NR:ns ## COG: Cgl1105_3 COG0567 # Protein_GI_number: 19552355 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Corynebacterium glutamicum # 371 1232 1 854 855 1412 78.0 0 MSNSSIYGPNAWLIDEQFQQYSKDPNSVDKEWREYFEANGAPKPAAQSKAANAQSSTPTQ KKSAAQAAPKKNQAEEKASSAPAKAAKKTEKKSESPLDRIKEAPEPGSRVLKGMFKAIAK NMDESLEIPTATTVRDIPVKLMWENRAMINDHLKRTRGGKISFTHILGYALVKAVQIHPD MNVRYELQDGKPTVVQPEHVNLGLAIDLPQKDGSRALVVAAIKEAENKTFSEFIDAYQDI VDRSRKNKLTMDDFSGVTINLTNPGGIGTRHSIARLTKGSGSIIGVGSMDYPAEFAGTSA DRLADLGVGRLVTLTSTYDHRVIQGAESGEFLRTVGQLILDDAFWDELFESMGVPYQPFR WAADVPNTGVDKNTRVMQYIEAYRSRGHLLADINPLGWKQPGLPWPDHRDLDLATHGLTI WDLDRTFNVGGFGGKETMTLREVVTRLRSAYTLKVGSEYAHILDRDERGWLQEQIEAGMP KPTNSEQKYILQKVNAAEAFENFLQTKYVGQKRFSLEGAESLIALLDSIVDTAAGQDLDE VVIGMPHRGRLNVLFNIVGKPLADIFGEFDGNYKGGQMGGSGDVKYHLGAEGEHLQMFGD GEIKVTLAANPSHLEAVDPVMEGIARAKQDILDKGAEGHTVVPIMLHGDASFTGLGVVQE TINLSQLRGYTTGGTVHVVVNNQVGFTTTPDSGRSTHYATDLAKGFDCPVFHVNGDNPEA VVWVGKLATEYRRRFGKDVFIDLVCYRLRGHNEADDPSMTQPQLYDIIDDHKSVRERYTE ELIGRGDLSDEEAEAAARDFHDQMESVFADHKKAEEAGPKEQTGITSSQELTRGLDTSIT AEELAEIGDAYGTPPEGFEYHKRVAKVAKDRQKSSREGGIDWGWGELIAFGSLANSGKVV RLAGEDSRRGTFTQRHAVAFDPRTGEEHNPVAHLAKSKGNGGKFMVYNSALTEFAGMGFE YGYTVGNPDAVVAWEAQFGDFANGAQTIIDEYVSSGEAKWGQLSSLILLLPHGYEGQGPD HSSARIERFLQLCAEGSMTVAQPSTPANHFHLLRRQALGEMKRPLVVFTPKSMLRNKAAT SSVEDFTEVKKFQSVINDPNFVDIKGKKVGDTDKVKTIMLVSGKLYWELAKKKEADGRDD IAIVRVEMLHPIPFNRLREAFEAYPNATQIRFVQDEPANQGPWPFYNEHLRDLIPDMPEM VRVSRRSQSSTATGNAKVHQIEQKNLLEEAFDV Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:02:56 2011 Seq name: gi|227860909|gb|ACLH01000011.1| Corynebacterium aurimucosum ATCC 700975 contig00011, whole genome shotgun sequence Length of sequence - 54185 bp Number of predicted genes - 50, with homology - 49 Number of transcription units - 27, operones - 11 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 119 - 153 7.0 1 1 Op 1 . - CDS 217 - 5094 6512 ## cauri_1006 putative surface protein 2 1 Op 2 . - CDS 5055 - 5483 391 ## cauri_1005 hypothetical protein 3 1 Op 3 . - CDS 5449 - 6162 487 ## cur_0492 putative cell surface protein precursor - Prom 6291 - 6350 4.4 4 2 Tu 1 . - CDS 6553 - 7329 839 ## cauri_1004 putative secreted protein - Prom 7410 - 7469 2.7 5 3 Tu 1 . + CDS 7480 - 8628 1495 ## COG0489 ATPases involved in chromosome partitioning + Term 8661 - 8716 9.4 6 4 Op 1 . - CDS 8636 - 9184 497 ## COG1826 Sec-independent protein secretion pathway components 7 4 Op 2 . - CDS 9252 - 9701 216 ## cauri_1001 hypothetical protein 8 4 Op 3 . - CDS 9796 - 10461 859 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 9 5 Tu 1 . + CDS 10612 - 11271 815 ## COG4122 Predicted O-methyltransferase - Term 11278 - 11329 17.1 10 6 Tu 1 . - CDS 11355 - 12572 1533 ## COG0448 ADP-glucose pyrophosphorylase - Prom 12719 - 12778 2.1 + Prom 12568 - 12627 1.6 11 7 Op 1 . + CDS 12738 - 13892 1095 ## COG0438 Glycosyltransferase 12 7 Op 2 . + CDS 13904 - 15361 1269 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 15385 - 15420 7.2 - Term 15604 - 15647 -0.1 13 8 Op 1 . - CDS 15752 - 16639 950 ## COG0500 SAM-dependent methyltransferases 14 8 Op 2 . - CDS 16649 - 16816 183 ## cauri_0994 hypothetical protein 15 9 Op 1 . - CDS 16948 - 17244 319 ## cauri_0993 hypothetical protein 16 9 Op 2 3/0.111 - CDS 17248 - 17985 767 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 17 9 Op 3 2/0.333 - CDS 17989 - 18831 924 ## COG0294 Dihydropteroate synthase and related enzymes 18 9 Op 4 2/0.333 - CDS 18828 - 19598 1048 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 19 9 Op 5 . - CDS 19606 - 20694 1195 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 20 10 Op 1 . + CDS 20786 - 22144 1621 ## COG1113 Gamma-aminobutyrate permease and related permeases 21 10 Op 2 . + CDS 22163 - 23134 1424 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 23147 - 23185 5.0 22 11 Tu 1 . + CDS 23223 - 24653 1553 ## COG1113 Gamma-aminobutyrate permease and related permeases + Prom 25300 - 25359 1.5 23 12 Tu 1 . + CDS 25445 - 26290 361 ## cauri_0985 hypothetical protein + Prom 26304 - 26363 2.0 24 13 Tu 1 . + CDS 26407 - 27042 556 ## cauri_0984 hypothetical protein - Term 27172 - 27217 -0.3 25 14 Tu 1 . - CDS 27239 - 27802 594 ## cauri_0983 hypothetical protein - Prom 27849 - 27908 1.6 - Term 27836 - 27892 6.0 26 15 Op 1 . - CDS 27911 - 28669 647 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 27 15 Op 2 4/0.111 - CDS 28718 - 29803 1201 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 28 15 Op 3 . - CDS 29807 - 30130 449 ## COG1146 Ferredoxin 29 15 Op 4 . - CDS 30181 - 30573 284 ## cauri_0979 hypothetical protein 30 15 Op 5 1/0.444 - CDS 30570 - 31436 884 ## COG2120 Uncharacterized proteins, LmbE homologs 31 15 Op 6 3/0.111 - CDS 31429 - 33030 1045 ## COG0747 ABC-type dipeptide transport system, periplasmic component 32 15 Op 7 . - CDS 33115 - 35025 2667 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 35200 - 35259 2.4 + Prom 35016 - 35075 3.5 33 16 Op 1 . + CDS 35287 - 36006 830 ## cauri_0975 putative secreted protein 34 16 Op 2 . + CDS 36006 - 36542 700 ## COG2306 Uncharacterized conserved protein 35 16 Op 3 . + CDS 36585 - 37505 1071 ## COG2354 Uncharacterized protein conserved in bacteria - Term 37376 - 37416 2.5 36 17 Tu 1 . - CDS 37509 - 38306 857 ## COG0428 Predicted divalent heavy-metal cations transporter 37 18 Tu 1 . + CDS 38401 - 39243 805 ## cauri_0971 hypothetical protein 38 19 Tu 1 . + CDS 39524 - 39682 101 ## 39 20 Op 1 6/0.000 - CDS 39692 - 39991 189 ## COG3093 Plasmid maintenance system antidote protein 40 20 Op 2 . - CDS 40000 - 40281 163 ## COG3549 Plasmid maintenance system killer protein - Term 40288 - 40331 8.1 41 21 Op 1 7/0.000 - CDS 40472 - 42253 1437 ## COG3276 Selenocysteine-specific translation elongation factor 42 21 Op 2 . - CDS 42263 - 43549 861 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] - TRNA 43575 - 43665 26.1 # SeC(p) TCA 0 0 43 22 Tu 1 . + CDS 43701 - 44678 1089 ## COG0709 Selenophosphate synthase + Term 44707 - 44770 2.0 44 23 Tu 1 . - CDS 44668 - 45642 633 ## cauri_0965 hypothetical protein 45 24 Op 1 16/0.000 - CDS 45759 - 46802 1108 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 46 24 Op 2 5/0.000 - CDS 46812 - 49409 3002 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 47 24 Op 3 . - CDS 49518 - 50084 576 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 50129 - 50188 2.1 - Term 50146 - 50193 6.2 48 25 Tu 1 . - CDS 50208 - 51041 1215 ## COG3861 Uncharacterized protein conserved in bacteria - Prom 51249 - 51308 3.7 49 26 Tu 1 . + CDS 51512 - 52582 1110 ## COG0095 Lipoate-protein ligase A + Prom 52593 - 52652 1.7 50 27 Tu 1 . + CDS 52700 - 54070 1743 ## COG1301 Na+/H+-dicarboxylate symporters + Term 54082 - 54136 1.1 Predicted protein(s) >gi|227860909|gb|ACLH01000011.1| GENE 1 217 - 5094 6512 1625 aa, chain - ## HITS:1 COG:no KEGG:cauri_1006 NR:ns ## KEGG: cauri_1006 # Name: aap # Def: putative surface protein # Organism: C.aurimucosum # Pathway: not_defined # 13 1625 1 1613 1613 2394 99.0 0 MGNTQVFDSSNSLTRYNKANVIDSKAFSLDDTEYHSPKYDKTDASIISGVDSATGPIATE PQKVTFTQTPDLIKDLVKKKGDGGFEAKVTLDEKYVFDGWSVEMDEDYNVTVTAPENPKP GSFAQPKITVEYSNGSTDVLQLLVVVDPNNTQVTDLVRPGLSKGKLNEEITAQVGTKSIM KGHKPVHPAKFEIDQSTVPEGWTVTVDDTGKVTAKADDTVTPGSIITPKVKATYPDQTTD EIETQFQAIVDIKIPTYDTVTGQPNASVSLTPEIPERGLSGNTTDEAPTRYTFEDGTNQT TLTSKDGKTWTVFVDEKTGEITTTIPKGAQEGDILNVPVQAHYSDEGKQKPQTVVGTVVV IKGDIKANYNVQTTAPGQEVKHQVVDTPDGSTFSFGNKNGKPVLTQEVNGWKYTIDPNTG EVSSTPPADAKPGDKNTVTVTVNAPGGLTTQAPVTTVVKLTNSWESEPVVPSQTVYPGGT ATSPIGVEKPADINLAADKPFTIDPNGKGLEATGENNKFGNPTYKMKTANGDWIVGLDDK GNVISTAPETAKPGDKIDVPVIVTYEDGSKDNTTATVNVIDVPKREVPFQVEYKYDDTVP AGTYKVENKGEPGEEKMNLDGTWERTQEPKNEVVVVGTKPAESAKDVTWTVPIPFPTEVR ENPDLKPGETKVVQEGENGEKTYTAKFTAKGSEAQVAEEETTKEAKPRIIEYGPGIAPSE LVTKTEKPIPFDTKVVFDDTLAAGEQKIDQKGELGTEVETSTQKLVDGKPSGDPVVTSER TKEPTEQIIRVGTKTTGKNTETVKSEVPFGVKIEFDPNLPAGTSEVVTEGKPGEKTVTIT RDITNSQPGDPQVTEEITKQPVDQVIKVGTKPSEASEKVTWTAQVPFEVETRPNPELKPG EIKVVQKGVPGEKTYTADFSAKGDQATVAPEEKQTKDPVNEIIEYGPAAEDTTVVTKVEK PVPFETEIVFDDSLEEGQQKVDQQGELGTEVVTSTQKIVDGKPSGDPEVSTERTKEPTKQ IIRVGTKTTGKNTESVETEVPYDVKVVYDPSLKPGESKVTQEGKPGKKKVTIERDIVNSK PGDPKITEEIIEKPVEKIVTVGTKPAEATNKATWVAPLPYDTIVRVNPELKPGEMKVVQK GEYGEKEFTADFTAKDNTSTVNTTERVTKQPVEQIIEYGPKIDDSEVVTKLEKPVPFETE IVFDPNLKAGEQVVDKQGELGTEVVTSTQKIVDGKPSGEPTVTTERTKEPTNAIIRVGTK AGPVSDKVEWTEKTPYETEIRVNPDLQPGETKVVQEGTPGEIKHTVTLTVDNGEVSKEES SEEISKPSPRIIEVGPAENQTELTDKHTEEIPYETIIEYDPNLEAGKVEEDQPGVNGEKE VSKTWKLVNGEPVGDPETTETVTKEKQDRKIRVGTKCNCDKPTDPDTPDNPDNPDKPDTP DNPDNPDEPGKPDEPGKPDEPGKPDEPGKPDEPGKPDEPGKPDTPDNPDKPGTSSIPNLS SLWPLIPLVIIPPVLAHFFKPPHLPELPTKPAKPVEPLKPEEPKAPEAPKAPSAENQPTS EQTPSAQPSQASQPSATTSTPASSKSTSSGKLANTGANVLGLIGVALALIAGAALILRPS RRKDS >gi|227860909|gb|ACLH01000011.1| GENE 2 5055 - 5483 391 142 aa, chain - ## HITS:1 COG:no KEGG:cauri_1005 NR:ns ## KEGG: cauri_1005 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 142 48 189 189 274 99.0 1e-72 MNPWPSENIECNPITVSWESFEKHVIVPGEQTKVGKINVPAVANGGTDDSMSRMVVEAYD GNGKFIGTTDPAASGGTQNLRIDEATGEIFFTWPEYRGTDLATDKNVNFSVLAKPRTVDQ LQAAGENNNEWVTLKYSIAPTR >gi|227860909|gb|ACLH01000011.1| GENE 3 5449 - 6162 487 237 aa, chain - ## HITS:1 COG:no KEGG:cur_0492 NR:ns ## KEGG: cur_0492 # Name: surB # Def: putative cell surface protein precursor # Organism: C.urealyticum # Pathway: not_defined # 1 213 1 212 1628 254 66.0 3e-66 MNAPRSGSARRRSSRKGVAALSAITLALSGLSITSFNTVVPEANAATLSGGIRDKSGAVE KDAQKASDLPAGSCTVSESTTEGSQAGFSWYTSEPSATSPSKTRWGLSVSFDNSKDRTFA DWGFTNNGRMGAYLDAAQIPALNAGQTLVDKVVTHKADEILGITASGPQRPLNLNAKLTD AKVKQFAEATATDPVRYAWQGNYKQDNPQGPRAKGHPGNQLILYGHREPVAEREHRM >gi|227860909|gb|ACLH01000011.1| GENE 4 6553 - 7329 839 258 aa, chain - ## HITS:1 COG:no KEGG:cauri_1004 NR:ns ## KEGG: cauri_1004 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 258 1 258 258 469 100.0 1e-131 MRLILMPRLIARSRTFARVVGVALVGVVGASLSACSGYEPKPEPNPVNSAPITIMIDPTS HEQRVLAEIYRQTLRDEGRAATVSQKPMLVRQGGEHVSGVSTNGNFFVGCTGEFLSVYNP EEARAISKDYVAAKEEGTKDEDFLERTHVALMASLPPEVSVVEPAGAEGCPNSKPELPQN YVVVYQDGLFNRDEKLEVASFTKFLTAQDLDEVVQKVEDSEDFEATVRAWMEANLMQNLN EEGDSNSSGGSDLVHEES >gi|227860909|gb|ACLH01000011.1| GENE 5 7480 - 8628 1495 382 aa, chain + ## HITS:1 COG:Cgl1099 KEGG:ns NR:ns ## COG: Cgl1099 COG0489 # Protein_GI_number: 19552349 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 6 378 2 373 374 447 68.0 1e-125 MRVMTSAITESSVRDALTRVDDPEIGRPITELGMVKSVAVNGPDVDIELYLTIAGCPMKG TIESNTRAAVAELDGVGNISISMTPMSDEQRKELKQKLRGGQAEPEIPFAKPESTTRVFA VASGKGGVGKSSVTVNLAAALVNKGLKVGIVDADIYGHSVPSLLGSTAGPTVLDDEMLLP PISHGIKHISIGQFVEGNAPVVWRGPMLHRALQQFLADVFWGDLDVLLLDLPPGTGDVAL SVAQLIPNAELLIVTTPQAAAAEVAERAGSISQQTRQRVAGVIENMGAMVMPDGSTMDIF GSGGGSVVAERLSVLLGHEVPLLSSIPLDPSLRAAGDAGTPIVISAPDSPATAAINKVAD SIAVRSDSLVGKKLGLGVTRKG >gi|227860909|gb|ACLH01000011.1| GENE 6 8636 - 9184 497 182 aa, chain - ## HITS:1 COG:Cgl1098 KEGG:ns NR:ns ## COG: Cgl1098 COG1826 # Protein_GI_number: 19552348 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Corynebacterium glutamicum # 1 138 1 136 156 94 50.0 1e-19 MFSSIGWVEILVIVLLGLVIIGPERLPGVIMDVRAAIYAARKAIANAKAELNGEMSGLGA EFNDLRVPLSQAAEWTRMGPRGVITKALFDGDDSAWDDFNPKKMAEDIKKNTSPYEHDAD MNNQPAQPAPEQNTGRPTFDYSQVYPDLGAQQTAGEKAKTTQPPRGGNAPTGEGSSSWED VT >gi|227860909|gb|ACLH01000011.1| GENE 7 9252 - 9701 216 149 aa, chain - ## HITS:1 COG:no KEGG:cauri_1001 NR:ns ## KEGG: cauri_1001 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 149 1 149 149 264 100.0 8e-70 MKAEGHSGDGHSLSLSGFFTEAQAKVRDKAKARAQRADTIGHLGPEAVVAFVDGEMPAKY AHRVRIHLVHCPECRAEIHHQRNAAEWVRECSVESHVKAPDSLMAKLAGIAHQGPGPGPD AEAPAHQPRQDFLDKVEMVVRAIRHNQRG >gi|227860909|gb|ACLH01000011.1| GENE 8 9796 - 10461 859 221 aa, chain - ## HITS:1 COG:Cgl1096 KEGG:ns NR:ns ## COG: Cgl1096 COG1595 # Protein_GI_number: 19552346 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Corynebacterium glutamicum # 30 220 22 212 213 318 85.0 5e-87 MTTQQREFEHAHRSTDFSATGSHDASGETEELTGTAAFDAGQAEMPSWGELVAEHADEVY RLAYRLSGNQHDAEDLTQETFMRVFRSLDKYQAGTFGGWLHRITTNLFLDMVRHRSKIRM EALPEDYERVPGTDMTPEQAYTVANLDPALQSALDNLAPDFRVAVVLCDVVGMSYDEIAE TLGVKMGTVRSRIHRGRSQLRAALEKEAQTNADTRSLLRTR >gi|227860909|gb|ACLH01000011.1| GENE 9 10612 - 11271 815 219 aa, chain + ## HITS:1 COG:Cgl1095 KEGG:ns NR:ns ## COG: Cgl1095 COG4122 # Protein_GI_number: 19552345 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Corynebacterium glutamicum # 7 218 2 212 213 246 63.0 3e-65 MVFFVTTTAYDAMRTYIESTSEVSEVLAGARAHAEEYGLPAPDEATGQLLSTLAAISSGT TSRPQAVAITPAASVVGLYLLAGMPENGILTCIDPEAEHQASAKRTFREAGYSPSRGRFL PSRPLDIMGRLANDTYQVIYAEVPALDMPALLKAAWPLLHQHGTLVLANALLDGTVADPS RTDRDTAAAREADEYARSLEGAAVTRLPYGAGLTLITKL >gi|227860909|gb|ACLH01000011.1| GENE 10 11355 - 12572 1533 405 aa, chain - ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 1 390 5 394 409 619 78.0 1e-177 MRSLPNVLAIVLAGGEGKRLFPLTEDRAKPAVPFGGSYRLIDFVLSNLVNAGFLKIAVLT QYKSHSLDRHISQAWNLSGPTPQYIASVPAQQRRGKRWYNGSADAILQSLNLIYDEKPDY VIVFGADHVYRMDPAQMVEEHIATGLDCSVAGIRVPRSEASAFGCIQADGMGTITEFVEK PENPPATPDDPNMTYASMGNYVFTTQALIDALLEDEKNEDSAHDMGGNIIPYFVEREQAH VYDFMANEVPGSTERDHGYWRDVGTIDSFYEAHMDMISVHPIFNLYNRSWPIHSTDDSNF PPAKFVQNGIAQSSMVAPGCIVSGGTVRNSVLASDVHVADGATVEGSVILPGVRIGRGAV VRHAILDKNVVVSDGAIIGVDRERDEERFKVSEGGVVVVGKNVKV >gi|227860909|gb|ACLH01000011.1| GENE 11 12738 - 13892 1095 384 aa, chain + ## HITS:1 COG:Cgl1093 KEGG:ns NR:ns ## COG: Cgl1093 COG0438 # Protein_GI_number: 19552343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 7 384 2 385 385 582 73.0 1e-166 MRAGIFSKEYPPEIYGGAGVHVAELTRFMREIIDVSVHCMGSERDEKDVFVHGVDPALKE ANAAVQTLSTGLRMANAASDIDVAHSHTWYTGLGGHLAGRLYGIPHVVTAHSLEPHRPWK REQLGGGYEISSWSEKNAMEYADAVIAVSAGMKDSILDAYPRIDADKVHVVLNGIDTQVW QPGESAVLDKLGVDKQRPIVAFVGRITRQKGVKHLLKAAQNFDADIQLVLCAGAPDTPEI AAETETLVEELRAQRDGVFWVKDMLSREEIKQVYSGADVFVCPSIYEPLGIVNLEAMACG TAVVASNVGGIPEVVVDGETGVLVNYDVNDEATFEADLAAAVNRVAADKELAQRFGSAGR QRAIEEFSWATIAQQTVDIYRSLM >gi|227860909|gb|ACLH01000011.1| GENE 12 13904 - 15361 1269 485 aa, chain + ## HITS:1 COG:Cgl1092 KEGG:ns NR:ns ## COG: Cgl1092 COG1621 # Protein_GI_number: 19552342 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Corynebacterium glutamicum # 1 473 1 460 498 444 49.0 1e-124 MTHKETHHRPELHFVPDSGILDAPAGIVRDGHTWHLFHQYRPDAGQPARWGHSTSEETAF EWLDCDDVLAPVGGELSLRAGSVAEGKDALNLYFTSVTSVGTSVRLARYTDYADECIVSD DPSALDPDVVRFGEAVGAHTNYDRFRSPSVVPDWAKEDREEGHDGWLMLALTGHSDAPVP VILDSPNGESWTLLGPLSFEGDPGFEEGEVPATSPIPPVVSPRLVRLRDEVDRDIYDVLF VTLEREGRDVSGYIVGRLDGTVFTVAKGFQRVDFGHDFSRPRNTNTTTGTIPQECRYDRA VILGLLNGNGRGDDATKHPTWEAEGWANSLSLPRAVTLQGGVLYQTPAEGLPDAVKLSDY AQSWTGVLEVPTGSSVTVTLKDGSGDTAAVIRHTGEEISLDRSMSKAFDNYFKDSAPAVA QLAEGDSDTLTVIQDGASVEVFVDGGLVAMSSRVYFDGGCSAIEVSTDGEAVIEQSWSRK GTKRS >gi|227860909|gb|ACLH01000011.1| GENE 13 15752 - 16639 950 295 aa, chain - ## HITS:1 COG:Cgl1091 KEGG:ns NR:ns ## COG: Cgl1091 COG0500 # Protein_GI_number: 19552341 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 1 292 1 285 288 344 61.0 1e-94 MLSHIVDILADPADGSALQGADNFSRLVSETGHSYDVAKQGYVTLAAGAGLKHQGDDAAM VTARETYLAMGHFAPFVEAVTGAVQDSLETQDAAEHAAGLNADTAPALLEVGAGTGYYLA HTLDSIEGARGVGLDISTHAAKHLAKSHERVGAVVADVWERLPLKDDSIHAISVVFAPRN PAEFQRVLAPGGEVIVLTPQAGHLDELREPLGILGVEEGKVERLYAQAEGFLEQAADPVD ISFPIVLDKASIAAQVGMSPSARHISPEDLAERMASLPQTLTVTAHARLDRLRSA >gi|227860909|gb|ACLH01000011.1| GENE 14 16649 - 16816 183 55 aa, chain - ## HITS:1 COG:no KEGG:cauri_0994 NR:ns ## KEGG: cauri_0994 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 55 1 55 55 75 100.0 9e-13 MAAMKPRTTGGEMEAVEESRKIVMRIPSDGGGRIVIELSKEEAAELGSLLVAVSS >gi|227860909|gb|ACLH01000011.1| GENE 15 16948 - 17244 319 98 aa, chain - ## HITS:1 COG:no KEGG:cauri_0993 NR:ns ## KEGG: cauri_0993 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 98 1 98 98 174 100.0 1e-42 MLSWILLIVVLIALVIIGTWAWGSLVGRGPVMEAPDKAVDTDYENLRALDEGRFDDLRFD VVARGYRQDQVDALLSAVERRLQVAPATSSDASSEPSA >gi|227860909|gb|ACLH01000011.1| GENE 16 17248 - 17985 767 245 aa, chain - ## HITS:1 COG:Cgl1088 KEGG:ns NR:ns ## COG: Cgl1088 COG0463 # Protein_GI_number: 19552338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 7 241 1 235 238 293 65.0 3e-79 MSDSVSVVIPALNEERTVAHVVRACLADDPLEVIVIDADSTDETAARAAAAGARVCNWRD VVEEPPQPGKGESLWRGVAAARGEVVVFIDADLESARPGMVTALNEPFVDPHVQLVKARY ARSLNGQPTGGGRVTELSAKPLLRMFFPELAHIDQPLGGEYAIRREAALGLPFVAGYGVE AGLLIDVAKRFGPYAIAEVDLGTRAHRNRPLNELSPMADVVSRTILSRAGVVGPVAQRPP LLGKI >gi|227860909|gb|ACLH01000011.1| GENE 17 17989 - 18831 924 280 aa, chain - ## HITS:1 COG:Cgl1087 KEGG:ns NR:ns ## COG: Cgl1087 COG0294 # Protein_GI_number: 19552337 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Corynebacterium glutamicum # 7 280 4 277 277 363 74.0 1e-100 MTPAPHLARVMAIVNRTPDSFYDKGATFELDPAIQRAEQALDDGASIIDIGGVKAGPGEH VDAAEEIERVVPTIAELHRRRPEALISVDTWRAEVAEEAIAAGAGLVNDTWAGWDPELIE VAGHHKVGYVCSHTGGVTPRTRPHRVHFDDVVADVISETTRLAERAADLGCPEELTFIDP THDFGKNTFHGLELLRRIDEIVATGWPVLMALSNKDFVGETLDRAVDQRVAGTLAATAWS AARGVAAFRVHEVGPTLDVIRMTAAIQGQMAPLATTRGLA >gi|227860909|gb|ACLH01000011.1| GENE 18 18828 - 19598 1048 256 aa, chain - ## HITS:1 COG:Cgl1086 KEGG:ns NR:ns ## COG: Cgl1086 COG1611 # Protein_GI_number: 19552336 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Corynebacterium glutamicum # 2 242 8 246 256 361 70.0 1e-100 MTPEQLRTLRGPLLVRTAGEQSSTFDQRLLQSGADHEWQHADPWRVLRIQGEFVDGFDAL AKLPKAVTVFGSARTPEDDPNYQLGVALGRRLVEAKYAVITGGGPGIMEAANRGAHEAGG LSVGLGIELPHEQGLNPYVDLGLNFRYFFARKTMFLKYSQAFICLPGGMGTMDEFFEVMC MVQTGKVTNYPIVLMGTEYWSGLVEWMKKTLAEGGFISPEDLDLFLVTDDIDEAVAHILA AHKVMSDKRLREQENK >gi|227860909|gb|ACLH01000011.1| GENE 19 19606 - 20694 1195 362 aa, chain - ## HITS:1 COG:Cgl1085 KEGG:ns NR:ns ## COG: Cgl1085 COG0624 # Protein_GI_number: 19552335 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Corynebacterium glutamicum # 3 360 9 367 369 439 63.0 1e-123 MTLNLFSDPIELTKALVDIPSPSHHEQAIADAVEEALRGLDQSKVEVERYGNTVCARTNR GFESRVVLAGHIDTVPLADNVPHTMSEDGSIMYGCGTVDMKSGMAVYLNAFAQLYDSDEL KHDLTVIAYEGEEVATEFNGLGHLQKDHPEWLHGDLALLGEPSGAIIEAGCQGTIRVRVT AHGTRAHSARAWLGSNAAHTLAPVMLNVANYQPRDVEIDGCTYKEGLNIVHLESGVATNT IPDEAWMFVNFRFAPDRSSEEALAHLMEVLGEHENITVEVDDIAGAALPGLGQPAARALV DAVGGNVRAKYGWTDVARFSEMGTPAVNFGAGDPGFAHKKDEQVPVTQITEVSTALLNYL KG >gi|227860909|gb|ACLH01000011.1| GENE 20 20786 - 22144 1621 452 aa, chain + ## HITS:1 COG:Cgl1083 KEGG:ns NR:ns ## COG: Cgl1083 COG1113 # Protein_GI_number: 19552333 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Corynebacterium glutamicum # 14 438 1 426 445 427 61.0 1e-119 MAAATQLKTRHLTMMGLGSAVGAGLFLGVGLGIQVSGTSVLISYAVAGVLIALVMWMLGE MAAARPSLGAFSTYAGQAFGPWARFTLGWIYWFMLVMVMGAEITGAAAIVSNWFGVDPWI PALVAVVLFAIVNFAAVGGFGEFEFWFAIIKVATIVAFLGVGVLMALGILPGMDLSVAGH NFTENFLPNGGPGFAAGLLAVAFAFGGIELVTIAAAESEDPAHNVATAVRAIIVRIMVFY IGSILVITLALPFSSIQDADVAADSPFTLVLAAAKIPFAAGFMEAIIALALLSAFNAQIY ATSRLVYDMAKDHSAHHVFLKTNNSGSPIYAVVLSIIFAFASVALQYWNPPGLLAFLFNA VGGCLLVIWCFIVASYIKLHPQMKANGELTTLRVPGFPWLPWLTALALVGLTILMLFDAS ARNQVLAVLILTVALVVIFHLLPGNSRRTAEA >gi|227860909|gb|ACLH01000011.1| GENE 21 22163 - 23134 1424 323 aa, chain + ## HITS:1 COG:Cgl1082 KEGG:ns NR:ns ## COG: Cgl1082 COG2171 # Protein_GI_number: 19552332 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Corynebacterium glutamicum # 1 323 1 297 297 362 63.0 1e-100 MTSASARGLATITHDGTVLDVWFPAVHTDISVEASGTERLEEVPQQFADLVGPDEERGVA RIAVETSIKDLDEAPADTYDAYLRLHLLSHRAVKPHGLNVDGIFGKLANVVWTNYGPCAV ADFQMVRGRLASRGPVVVYSVDKFPRMVDYVVPSGVRIGDADRVRLGAHLAEGTTVMHEG FVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGKEVISIGERCLLGANS GVGISLGDDAVVEAGLYVTAGTKIAVFGKIAEALGLSEGDTIKGSKLSGVSGVLLRRNSV TGAVEAVEWKSEAVALNEDLHKN >gi|227860909|gb|ACLH01000011.1| GENE 22 23223 - 24653 1553 476 aa, chain + ## HITS:1 COG:Cgl1083 KEGG:ns NR:ns ## COG: Cgl1083 COG1113 # Protein_GI_number: 19552333 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Corynebacterium glutamicum # 26 458 1 437 445 433 59.0 1e-121 MLKVTAQNDSSSRSLGSGLKVRHLTMMGLGSTIGAGLFLGTGVGISAAGPAVLLAYLVAG FLAILVMQMLGEMGTVIPASGSFSEYAEHGIGRWAGFTQGWIYWLATVAVLGAEITGAAG FIGAWFNCPPWIPAAVCVALFGTINLLRVRLFGEFEYWFAFIKVAVIISFLVIGALLIFG LLPGHTFIGTSVFLADGFMPNGLGGVAAGLLAVAFAFGGIEVVAIAAAESEDPEKSLVNA VRTTITRISVFYLGSVLVITFLLPYSSLGSAQSAAESPFTMVLDRAGIPGAAAIMEVVIV LALLSAFNAQIYASSRMMHSLASRGEAPKLFAATDRRGVPTAAIALSVILSAVMVVLNYA DTGWLLSFMLNAAGASLLIVWVFIAVSQLRLRPQLEAIHPLPVRMWAYPYLTWFALALFA AIAVLMLSDASARIQLFSAATMFAVLAIAGVINAKARGISPTARLPLPTAEELETR >gi|227860909|gb|ACLH01000011.1| GENE 23 25445 - 26290 361 281 aa, chain + ## HITS:1 COG:no KEGG:cauri_0985 NR:ns ## KEGG: cauri_0985 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 12 281 1 270 270 501 100.0 1e-140 MKAWTTAELREMGLSKEAIRRKLRAGKLFRVHRGIYSDEWSPLAVARALAHGLSRIHFTG KTAREIHLGRKLTFPLEAEGPRTLKGKNFRVTHSRLSATTKVNDLPVVQVLWAARRLASA CGQLLEEHYRGKTGPERLSKDQRRMRRIPRRLKETIRHTPIGADSVPERQLSRRLRADGI FPEHNALIANYRFDLKMGKLIVEVDGWEHHKHSRAFQADRSKQNAAVAHGYTVLRFTADD IRYHLDDAVLLIKTTLEQLKGRKPKLPAVVMQPFWEWHVCM >gi|227860909|gb|ACLH01000011.1| GENE 24 26407 - 27042 556 211 aa, chain + ## HITS:1 COG:no KEGG:cauri_0984 NR:ns ## KEGG: cauri_0984 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 211 1 211 211 410 100.0 1e-113 MSQADLAERAGVSRQTIANIERGNYSPSVYLALGICRELGKPSKKSLEMNNMINALANYT LNEIERASHDEFERETCYKALTISASPTMFLELVAAAILAWVLPGQMSMLCFLAIAPSVI GNAIGTAWLRKRVATPLAGRNWAAMAVYFIPVIAIFTGVAYNAYAPADGHNPTAYLAGTA VGAITVLILAPFIRRLQHRCDQERLDAELDD >gi|227860909|gb|ACLH01000011.1| GENE 25 27239 - 27802 594 187 aa, chain - ## HITS:1 COG:no KEGG:cauri_0983 NR:ns ## KEGG: cauri_0983 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 187 1 187 187 345 100.0 7e-94 MADLSFARFASNLGQFIKFGLVGGSGALVNIAVSILAAKCGLSWFGATPHDAMFNLFGTQ FHVRWFMFFSTIAFLVANTWNYQLNRMWTFKSVNKVSWLRGFFPFLITGIGAYLVTLAVQ YLLMNPTSPLQLPPHIFDDTTGFRTMYYWANAISIVVAMPINFIFNKLWTFRSTPKKAVV VHETEPA >gi|227860909|gb|ACLH01000011.1| GENE 26 27911 - 28669 647 252 aa, chain - ## HITS:1 COG:NMA1085 KEGG:ns NR:ns ## COG: NMA1085 COG0564 # Protein_GI_number: 15794033 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Neisseria meningitidis Z2491 # 35 250 73 301 307 138 39.0 8e-33 MLTGIVPATPTYWAGEAGDSAFSPGTRLEPGTVLPGPTLAWYHPSVPSEEPILFDYRVVF EDGDLIVADKPHFLPTTSNGRIVRETLQTRLRVDLNEDSIVPLHRLDRLTSGLVLCSRNP RTRAAYQQLFQKRVVVKHYRAQVAAPFSFDGTVRLGMRRVRGERQVRVDSTGTPTVTRVR ASGTTADVWPLTGHTHQIRVVLNHLGHPIVGDDTYPVDRGLDLYDFSTPLLLSHVALSFS DPVTGRKREFQL >gi|227860909|gb|ACLH01000011.1| GENE 27 28718 - 29803 1201 361 aa, chain - ## HITS:1 COG:Cgl1079 KEGG:ns NR:ns ## COG: Cgl1079 COG0436 # Protein_GI_number: 19552329 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Corynebacterium glutamicum # 2 360 3 367 367 455 65.0 1e-128 MSRTPLGHTLPDFPWNSLADAKKKAQAHPDGIVDLSVGNPVDPVAPGVQLALSAAAEAPG YPQTQGTPELREAIAKALQRRYNMNVDAVLPVIGTKEAIAWLPTLLGMRGETVAFPTVAY PTYEVGVLLAGAKPLRADEDFEDASLVFINSPSNPTGRVLGVEKLREIVAWARANNAIVA SDECYMGLGWDDENPPVSILDPRVTDGDNTRLIAMHSLSKSANMASYRAGFFAGDAQLIA ELLELRKHAGLIVPGPIQAAMVAALDDDPSEALQRQRYAARRVDLMRALTGAGFRIEHSE AGLYLWATRGENCRKTVDWLAERGILVAPGDFYGPAGEQYVRIGLNGTDERIAAAVARLA E >gi|227860909|gb|ACLH01000011.1| GENE 28 29807 - 30130 449 107 aa, chain - ## HITS:1 COG:Cgl1078 KEGG:ns NR:ns ## COG: Cgl1078 COG1146 # Protein_GI_number: 19552328 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 104 1 104 105 181 96.0 4e-46 MTYTIAQPCVDVMDRGCVEECPVDCIYEGKRMLYIHPDECVDCGACEPACPVEAIFYEDD VPDEWLDYNDANAAFFDDLGSPGGAAALGPQDFDVPMIAALPPQNQE >gi|227860909|gb|ACLH01000011.1| GENE 29 30181 - 30573 284 130 aa, chain - ## HITS:1 COG:no KEGG:cauri_0979 NR:ns ## KEGG: cauri_0979 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 130 1 130 130 225 100.0 4e-58 MTERAIRTDFSRGEQVGGLVWLVLGALCSLTLEVVYLTARVPWPGETGMAFPITILIAFW FNGVLTRTARLWSENPYIAGVPGLAWVGGFLAFMLGAAMGDSSLLPNNILSLLLFAAGIA GSVWPFFASE >gi|227860909|gb|ACLH01000011.1| GENE 30 30570 - 31436 884 288 aa, chain - ## HITS:1 COG:Cgl1076 KEGG:ns NR:ns ## COG: Cgl1076 COG2120 # Protein_GI_number: 19552326 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Corynebacterium glutamicum # 4 280 5 276 290 259 54.0 5e-69 MIKDLAGYRVVAVHAHPDDEVLFTGGTLADLSARGAQVTVITATLGEEGEIIGEPYQGLA ETGQLGGFRAWELKHALDALGVEGIQLGGFGHFRDSGMEGSPAHENPRALVNRVDEATEL LHGHLAVLRPHAVLTYGPDGGYGHPDHIAVHKAVHAAAEPEQRIWWAVFERTAHYRGLEA VTPPEGWSLPDKEYLDNFTNADCDITYELTDAALSAKRAAMLAHATQIWLADGSLTPVNP HAVQVGLKDPAQVPAAYALSNLLTMPLLRQEFYQLGQGEPQDSLLGEK >gi|227860909|gb|ACLH01000011.1| GENE 31 31429 - 33030 1045 533 aa, chain - ## HITS:1 COG:Cgl1075 KEGG:ns NR:ns ## COG: Cgl1075 COG0747 # Protein_GI_number: 19552325 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 19 532 2 480 483 334 41.0 3e-91 MDGFLPRLGVILAAALLTACQANPGPPPVVDEDDRSATPTNSSTTAPPREAAPEEDALPK RSTVSIGVDPLRGGLNPHLVVNNSELVNQIAELVLPSAFHGTEMDTDVLESAEEIEAPEG VAMRVRYTIAAPAQWSDGTPISGSDFYYLWSQITRTPGAKNVSGYRAIEAVRTSGNGRVV TVDFSHRVEVWHKLFAHLMPSHLLEDRDFASVLADGIPASAGRYLVESMDRGRGIITLNR NDRFWGEDPANIDVIQLRAVRDTAQAVNMLRSRQIGFADFTPQQTTLENLSLLSNVNTGV VIRQRQLRLEMSAAEGALNEQPQRRALASLLDTDQIARLATGRASELEPGHNPFGSNAEL APLRERAGRKPVRIGVDPQNPTALAAATTIVDVLQAKAIDAEVVTERLTTITSDLLPAGK VDAVVAWDENGSDAMSLANYFVCATPTRPAATLSGFCPDNSAESALGILSGELDSEAAEE RVEQLNKEEVLFVPLLNEVRVHALGKGIVGPGQSIKDWDSGLISAPQWRKDDD >gi|227860909|gb|ACLH01000011.1| GENE 32 33115 - 35025 2667 636 aa, chain - ## HITS:1 COG:Cgl1074 KEGG:ns NR:ns ## COG: Cgl1074 COG1217 # Protein_GI_number: 19552324 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Corynebacterium glutamicum # 1 636 1 637 637 978 79.0 0 MSNTEFRNVAIVAHVDHGKTTLVNGMLEQSGAFGDHGEHSDRVMDSNDQERERGITILAK NTAIHRKGLGKDGGDLIINVIDTPGHADFGGEVERGISMVDGVVLLVDASEGPLPQTRFV LTKALEAKLPVIICVNKTDRPDARIDEVVTEAQDLLLEIAAGLEDEEAAAAAEELLDLPV LYASGREGKASTENPGNGNVPNADDLQALFDVIYDVLPEPSAKVDAPLQAHVTNLDSDDF LGRIALLRIYSGTIKKGQQVAWMHYDEEGEMHTKTVKVAELLRTVGFQRQPDTEAIAGDI VAISGISDIMIGDTIADVEHPEPLPRIKVDEPAISMTIGVNTSPMAGQGGGDKLTARMVK ARLDQELIGNVSIKVLPTERPDAWEVQGRGEMALSVLIENMRREGFELTVGKPQVVTQVI DGKTMEPYEMLTIDSPSEHQGAITQLLAARKGQMQSMDVREGDWVRMVFRIPARGLIGFR TQFLTETRGSGIANSISDGLDVWAGDIKARPTGSLVADRSGQITAYALQQLADRGDFFVE PGMEAYEGMVVGANNRDEDMDINITKEKKLTNMRSATADATVTLAKAKTLSLDEALEFCG TDECVEVGPKVLRVRKVELSATDRKRAAARAKQLNK >gi|227860909|gb|ACLH01000011.1| GENE 33 35287 - 36006 830 239 aa, chain + ## HITS:1 COG:no KEGG:cauri_0975 NR:ns ## KEGG: cauri_0975 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 239 1 239 239 394 100.0 1e-108 MAFSEQHSSRSARRGVAGLTAAVMMGLLSITPAHAGAPDLSSLVSIPQSSNPLDSLGRPT PETQERVRAFAAQPWIPQEARSAILTALNFTAGEGGEGGVAMPEGNNPGFRQFYWPTVSA QCIGGQGDSVGSAIAVPGPTDMPAPGAGEGEAVFLFTALGTPTAAEEQGDMRVQWFNLDT FQFGTTPLFNNGINTDGPTTVSGRATTGKGTVVAVLSGAVNTAESSCSFPPTAAYLEVN >gi|227860909|gb|ACLH01000011.1| GENE 34 36006 - 36542 700 178 aa, chain + ## HITS:1 COG:Cgl1072 KEGG:ns NR:ns ## COG: Cgl1072 COG2306 # Protein_GI_number: 19552322 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 3 178 2 179 179 273 75.0 2e-73 MSTDLHPVKQETFNTADNINVDPKGFQREVDTYRVTDFGLYMARGANHPRFGYLESWLLP ELGLRANIFHFREGVDVHQDFYIDIADIDVDGDVWTTRDLYVDLVSTSGEPVDVLDIDEL AAATSNGLISAEEAERAMERTLAAVEGITRYGDDAMNWLRTLGMDLTWAEDVELVPAE >gi|227860909|gb|ACLH01000011.1| GENE 35 36585 - 37505 1071 306 aa, chain + ## HITS:1 COG:Cgl1064 KEGG:ns NR:ns ## COG: Cgl1064 COG2354 # Protein_GI_number: 19552314 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 299 1 306 318 294 61.0 1e-79 MAGGLFALLDDVALIARSAASSVDDVAALAGKTSMKAAGVVVDDAAVTPQYVQGVKPQRE LPMIWRITKGSLINKLVIILPIALILSWIAPWALTPILMCGGTYLCFEGAEKIFHSVFHR GEKEEKPAEERGPEAEDSLVKSAITTDLILSAEIMVISLNEVMDQPFWLRLGTLVTVGVL LTLGVYGAVGLLVKMDDIGVALLKRHDGDSALGTALVKGMPIVLNIIGIIGTAAMLWVGG HIVVKGLSEFGAEQPYGFIHHVTESINNGALAWLADTGLSMLCGFILGAVIVSIVMAVKA TAERVK >gi|227860909|gb|ACLH01000011.1| GENE 36 37509 - 38306 857 265 aa, chain - ## HITS:1 COG:Cgl1400 KEGG:ns NR:ns ## COG: Cgl1400 COG0428 # Protein_GI_number: 19552650 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Corynebacterium glutamicum # 1 265 1 268 268 293 65.0 2e-79 MDLATIAFAFSLVLLSGLSTSIGGALAVGKREPGPKFMAAALGLSAGVMLYVSFMEILPE ALKKLESTLGDEARATWTMMGAFFAGIAIITIIDRLVPEEINPHEPATTEEEARRKRLIK TGMFTAFALAIHNFPEGFATFLSGLEAPEIAIPVAVAIAIHNIPEGIAVAVPLRSATGSR KKAFWWATLSGLAEPLGALIGFALLMPFIGPMTFGISFAVIAGIMVFISLDELLPTAEET GEHHCAIYGLIAGMAVMAVSLALFI >gi|227860909|gb|ACLH01000011.1| GENE 37 38401 - 39243 805 280 aa, chain + ## HITS:1 COG:no KEGG:cauri_0971 NR:ns ## KEGG: cauri_0971 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 280 1 280 280 422 100.0 1e-117 MALYPLAPSYFGVEHVAILEHVNLSTALSIPGLAQQPALVDVSLLPDPTTGGWRVRSDFG FLGALDGEESAEYPALNRLRTAAMTPATHATVEIVDGEVEVAVAVGLDPWMIPANNQPAG TALLSGGHGALVRVAEGELTAHQLREMGTEQLIVTLALLDGTVLATHDNLVLGPCAELSD TPALAAAFAAATQSGASLAARAYVAAGRIAVDLPLDPTDPTHSAELFAPAVPPLPLDPDN PAVPPALDPDADWEFTAPADPLASPLPAGPRAFASPKDTF >gi|227860909|gb|ACLH01000011.1| GENE 38 39524 - 39682 101 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEHLATRQERYADRDFVIWAEDSWGSDDPDLGSRRSIRSASGGRPQSNRSRY >gi|227860909|gb|ACLH01000011.1| GENE 39 39692 - 39991 189 99 aa, chain - ## HITS:1 COG:Cgl1005 KEGG:ns NR:ns ## COG: Cgl1005 COG3093 # Protein_GI_number: 19552255 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Corynebacterium glutamicum # 1 99 1 99 99 149 71.0 1e-36 MSTKLYPPIHPGEVLNEDFIEAFGITQHKLAVEIGVPPRRINEIVHGKRGITADTALRLG RYFGIEPQYWLNLQSRYELEVAEDAVADEINGIRPLGAA >gi|227860909|gb|ACLH01000011.1| GENE 40 40000 - 40281 163 93 aa, chain - ## HITS:1 COG:SMc02476 KEGG:ns NR:ns ## COG: SMc02476 COG3549 # Protein_GI_number: 15966812 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Sinorhizobium meliloti # 1 93 1 92 92 98 55.0 3e-21 MIQSFGNRDTELVWLREASPRIDPRIHKTSNRKLHQLDAAVSLNSLRVPPGNRLEALKGD RKGTFSIRVNQQWRITFRWTEAGPADVVIEDYH >gi|227860909|gb|ACLH01000011.1| GENE 41 40472 - 42253 1437 593 aa, chain - ## HITS:1 COG:PA4807 KEGG:ns NR:ns ## COG: PA4807 COG3276 # Protein_GI_number: 15600001 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Pseudomonas aeruginosa # 1 582 3 623 641 236 34.0 7e-62 MATAGHVDHGKSSLVKALTGMEPDRWEEEKRRGLTIDLGFVWTRLDSGADVAFVDVPGHE KFLGNMLAGVGPASVVLFVVAADEGWQAQSTDHRDALRALGIEHGVVALTRADRADTARR AEVAAQVRAELAGTALADAPVVEVSAKTGEGVEKLRAELDRVLAGMPTSDPQARVRLWVD RAFSVKGAGTVLTGTLAAGTVSVGDEMELGGQLVTVRGVHSENTSVDSAGPVTRVALNLR GVAADEVHRGDALLSPGRWRVLDTVDIRRTFGTEMAELPQNLVVHIGTVGVGARLRPLGG EFARLTLESPLPLTLLDRFVVRSPGGRHVAAGFEVVDVHPAELSRRGDAKKRAAELEVLE PTNPSEWLKRCGYAAHEELVRDGFSVGEKPAGVIEFAQWWIAARQVTAWKNALLRAVDEH RAANPLSPGLTKAAAMDTLHLSEPSLLGLAVAAAKLESADGVLRVPGQALNLGAAERGVA ELERRLRAETFAAPEAADLKELGLGSKELAAAERAGRVLRLAKGVVLLPSAPREALEVVS TLEQPFTLSEARQALGTTRRVAIPLLEHLDATGATRLVDGKRFTFGPGTKEPK >gi|227860909|gb|ACLH01000011.1| GENE 42 42263 - 43549 861 428 aa, chain - ## HITS:1 COG:aq_1031 KEGG:ns NR:ns ## COG: aq_1031 COG1921 # Protein_GI_number: 15606324 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Aquifex aeolicus # 69 412 68 434 452 261 42.0 1e-69 MTTDPRRFIPKMDEILQYPAVQDAQHRLAPHSVRAIIDAVLADARRGSLAPSQIEGELAD RLEVAQPHSLRRVINATGVIIHTNLGRAPLPPAAVDALVAAAGYTDVEMDLDSGQRSRDR GRAAIDAVLAACPGAEDALVVNNGASALLLATAALAPGKEVIISRGELIEIGAGFRLPEL IESTATRLREVGATNRTHLADYERAMGEDTGAILKVHPSNFVISGFTSSVSVAELRALTD LPLIVDIGSGLLSPDNALPAEPSASEALRDGADLVLFSGDKLLGGPQAGVLVGQKEAIAA CKKHPLARAVRIDKLRLNALEASLATYSNAVQDALHIDPQRHRERTEKVAAAVGGEVVEH AGRVGGGGAPEVPLPGWAVALPEELARPLRLGEPPVVARVNQGRCLVDVRCVPEAQDAEL IAALRAVI >gi|227860909|gb|ACLH01000011.1| GENE 43 43701 - 44678 1089 325 aa, chain + ## HITS:1 COG:YPO2164 KEGG:ns NR:ns ## COG: YPO2164 COG0709 # Protein_GI_number: 16122396 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Yersinia pestis # 4 302 6 307 348 258 47.0 8e-69 MTDIKLTSFAAGGGCACKIPPGELESAVAGLVGTADPNVLVGLDDGDDAAAVRIPNGLAV ISTADFFTPMINDPYDWGRVAAANALSDVYAMGGTPITAINLVGWPREKLGLDVLREVLR GGMDVASEAGISITGGHSITAPEPTYGLAATGIVHPDKIMRNDAAEAGLPITLTKPIGVG ILNNKHKATGEVSQAAVDSMTTLNRDAAAAAVAAGVRAATDVTGFGLLGHLYKMCRASGI GAELDFSAVPAVDGAMEALAEGFIPGGSRRNLDWVRPHLDSDLSEEDLVFLADAQTSGGL LVIGEVPGYPVIGRTVTGEARITIR >gi|227860909|gb|ACLH01000011.1| GENE 44 44668 - 45642 633 324 aa, chain - ## HITS:1 COG:no KEGG:cauri_0965 NR:ns ## KEGG: cauri_0965 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 324 41 364 364 497 100.0 1e-139 MAEDFEFSSYYGKPVVTAPPWEWPIGGYLFLGGVAGGSAMLAAGAQATGNAPLKRSTRLT AFSAASVGSVFLVLDLGRPERLLNMFRVFKVTSPMSIGSWILGSFASAAALPAVVEADEL VGGVLPKSLRRLLDKAAGPAGAVAGVLGGPLAGYTAVLLANTSNPTWNDAKKHLPYVFVS SASAAASGAAMVFTPVENAGAARVLGITAAATDLAATRVMEANMEPEPLRPLHEGTPGKL MKASEALIAAGGVGTAIASVTKSRAVSVVSGLALLAGSACTRFGVLNAGLEAVKDPSTSI GPQKRRAEARRQAEGLTHSTVTSG >gi|227860909|gb|ACLH01000011.1| GENE 45 45759 - 46802 1108 347 aa, chain - ## HITS:1 COG:HI0007 KEGG:ns NR:ns ## COG: HI0007 COG0437 # Protein_GI_number: 16271982 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Haemophilus influenzae # 20 345 35 286 312 151 32.0 2e-36 MANILTEKADRHGYESYQRMAFFTDTSVCIGCKACEVACKEWNRNPVEGYAVTGNSYDNT GGLGANTWRHVAFIEQNNERIEQAREEGRRLVALGMPTASAPSVTPDTDDFRWLMSSDVC KHCTNAGCLDVCPTGALFRSEFGTVVVQDDVCNGCGTCVAGCPFGVIERRDDGGVTLKAD KTATVDYDVPDHAGVNVLAKLKQLKPQGPDHMPGQAMPIKNLGVAQKCTMCYDRLKIGEQ PACAKTCPTDSIQFGPYEEMLAAAKERVRVLHEQGLTEARLYGANSQDGVGGTGSIFLLL DSPEVYGLPPDPRVPTADLPQMYKTAVKAIGGMALAVAGAFMLGGRK >gi|227860909|gb|ACLH01000011.1| GENE 46 46812 - 49409 3002 865 aa, chain - ## HITS:1 COG:fdnG KEGG:ns NR:ns ## COG: fdnG COG0243 # Protein_GI_number: 16129433 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 2 792 234 1001 1015 539 39.0 1e-153 MAECHPVGFQWVVEAKKRGARIIHVDPRYTRTSAFANRHIGIRGGTDVVLLGAIIKYVLD NDLYFHDYVVDYTNAASIISPDFKDTEDLEGLFSGYDAEKGKYVTDSWQYVQKPEGSSWN VEKDMTLEDPNTVFQILKRHYSRYTPEMVEETCGISPEDFYYLADSIAQNSNPERTTCFA YALGFTQHTLGAQFIRTAAILQLLMGNVGRPGSGIMALRGHASIQGSTDIPTLFNSLPGY LPMPHVDQETWADYLDSFRQEDQKGFWQLGENYAVSLMKSYWGDAATKENNWGFDLMPRL SGAHSTYETLLAMLRKEVEGYFVFGQNPAVAQSNGGMQRRGLASLKWLVVRDFQEIETAS FWKDSPEVKNGELKTEEIATEVFLMPAATHVEKSGTFTQTQRMVQWRFQATPPPGQARSE AWFFYHLGKKIRERLANSTDPRDLPIKSVTWDYTEDEHGDPSSDEILREINGYYLDGPKK GQLLPSFTEMRADGSTSGGCWIYTGVYKDGINHAAKKVPGSEQNEVALEWGWVWPANRRI LYNRASAKPDGTPWSERKKYIWWDEDQGKWVGDDVPDFPVTKRPDYVAPVDAVGPDALDG DDPFIMQPDGLGWLFAPKGLSDGPLPTHYEPQESPVHNALYKQQQSPTRLTIKRADNLSR PEPGERGAEVFPFVFSTYRLTEMYTSGAMSRRLPYLAELQPGLFCEVDKELAAKRGLVNG EWATIVSPRGVIEAQVLVTDRMEMLTINGEDFHQIGLPYHYGESETTEVAGDGANDLLGL TLEPNVFIQNSKVGACDIQPGRRPRGEARVKLLREYQERAHLTVESGNRILDVSDAFTTE STASAENTGDDSTAGNEADYEGKES >gi|227860909|gb|ACLH01000011.1| GENE 47 49518 - 50084 576 188 aa, chain - ## HITS:1 COG:aq_1039 KEGG:ns NR:ns ## COG: aq_1039 COG0243 # Protein_GI_number: 15606330 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Aquifex aeolicus # 20 188 26 198 1015 115 35.0 5e-26 MSRFSPLNWPVVRQIRNKDAFGRDVSTQSAKSEDLRGRTVDADRVVQSVCPYCAVGCSQR VYVKDDRVIQIEGDPDSPISRGRLCPKGSASEQLINSSTRITTIKYRAPYATEWQELDEE TAMDMIADRFVEARARHWEDVDKQGRRLNRTMGIAGLGGATLDNEENYLIKKLFTATGAI QVENQARI >gi|227860909|gb|ACLH01000011.1| GENE 48 50208 - 51041 1215 277 aa, chain - ## HITS:1 COG:all5315 KEGG:ns NR:ns ## COG: all5315 COG3861 # Protein_GI_number: 17232807 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 4 270 22 277 288 69 29.0 7e-12 MGKNIKDLFNATAYDKAGEKLGSVKEVFVDEQSGQPTFVEVNHGLFGMSSSLVPLRGHDF TGDELKLAFSKDRIENAPDFDSDKPLTPEAQADIFKHYDLENAQDVTTYRDERDERAGVA GAGVAGAGVAGAGAGAHAKDETAATSSNLSNNEGEVIRSEERLDVNKERVATGEARLRKY VVTDTETVEVPVEREEVRVERTPISEADAANYTGTIGDNGAEEASVTLHEERVNVEKKTV PVEKVNLSKETIKDTETHTEDLRKEQIDTDGITETRK >gi|227860909|gb|ACLH01000011.1| GENE 49 51512 - 52582 1110 356 aa, chain + ## HITS:1 COG:Cgl1050 KEGG:ns NR:ns ## COG: Cgl1050 COG0095 # Protein_GI_number: 19552300 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Corynebacterium glutamicum # 6 355 4 351 352 484 67.0 1e-137 MNQTKHFELKVPGGKLLVVDLDIDTNSTVTAAKVSGDFFLEPEEAYEALAPALVGITTAT STEDIQSRLDAALARIDSPVALHGFDTHHLAVTVKRALSGGTDFTDHSWEILRPGVLPTP VNVALDEVLLNEVAEGKRGPTLRFWEWEDRAVVFGSYQSYANELDQEGVDKHGIIPVRRI SGGGAMFMEGGNCVTYSLYAPDSLVAGYSYEASYEYLDQWVLAALGKLGVNAWYVPINDI TSDGGKIGGAAQKRRKGAVLHHTTMSYDIDADKMMEVLRIGKVKVSSKGLASAKKRVDPL RRQTGVPREEIIDTMAREFATRYGAVDAELSDDSLAAARRLVDTKFLNEEWTKRIP >gi|227860909|gb|ACLH01000011.1| GENE 50 52700 - 54070 1743 456 aa, chain + ## HITS:1 COG:Cgl2499 KEGG:ns NR:ns ## COG: Cgl2499 COG1301 # Protein_GI_number: 19553749 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Corynebacterium glutamicum # 1 451 1 457 462 498 72.0 1e-140 MSDTSSRASSRTLPSWATGFGAQVIAGLIIGLILGFIASGMESEWLSDTLSGVGGAYVQL LKVMVPPLIFAAVVTSVANLRKVANAASLAISTLVWFAITAFFSVLAGIFVALVMKPGVG TTVDASTAADPSNVGSWTAFLQQLVPANFFGLKASLSDGEVSLSFGALQLLVISLALGIA AVKAGKAADPFLRFTESFLKVIQVVLWWIIRLAPIGTAALIGKAVATYGWDALSSLGKFV LAMYVGLALVIFVVYPAVLVFNRIPVVGFYKRVWPVFSLGFVTRSSMGVMPVTQRFTERA MGVPREYASFAIPLGTTTKMDGCASVYPAIAAIFIAQFYGIDLSPTQYLLIIFVSVIGSA ATAGTTGATVMLTLTLSTLGLPLAGVGLLLAIEPIIDMGRTAVNVTGQSLCATIVAKRAG IQDEAVWDAAGNGVSHIMNEDQDADELESQPVNTTA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:04:25 2011 Seq name: gi|227860908|gb|ACLH01000012.1| Corynebacterium aurimucosum ATCC 700975 contig00012, whole genome shotgun sequence Length of sequence - 38717 bp Number of predicted genes - 38, with homology - 38 Number of transcription units - 21, operones - 12 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 189 - 1451 956 ## cauri_0956 hypothetical protein - Prom 1496 - 1555 2.4 - Term 1631 - 1675 8.2 2 2 Op 1 5/0.000 - CDS 1722 - 2912 1182 ## COG0477 Permeases of the major facilitator superfamily 3 2 Op 2 2/0.167 - CDS 3014 - 4309 1236 ## COG0277 FAD/FMN-containing dehydrogenases 4 2 Op 3 . - CDS 4294 - 5466 772 ## COG3616 Predicted amino acid aldolase or racemase - Prom 5511 - 5570 2.2 + Prom 5466 - 5525 4.2 5 3 Op 1 . + CDS 5557 - 7104 1668 ## COG1012 NAD-dependent aldehyde dehydrogenases 6 3 Op 2 . + CDS 7122 - 8087 391 ## cauri_0951 hypothetical protein - Term 8009 - 8036 -0.9 7 4 Tu 1 . - CDS 8089 - 9000 876 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 9145 - 9204 3.7 - Term 9177 - 9211 8.2 8 5 Op 1 . - CDS 9229 - 9762 678 ## COG0693 Putative intracellular protease/amidase 9 5 Op 2 . - CDS 9927 - 11141 938 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 10 5 Op 3 . - CDS 11173 - 12258 1451 ## COG0012 Predicted GTPase, probable translation factor 11 6 Op 1 . + CDS 12306 - 13799 1351 ## COG0628 Predicted permease 12 6 Op 2 . + CDS 13806 - 14906 829 ## COG1322 Uncharacterized protein conserved in bacteria 13 6 Op 3 . + CDS 14984 - 15685 438 ## COG1113 Gamma-aminobutyrate permease and related permeases 14 7 Tu 1 . - CDS 15682 - 16671 331 ## PROTEIN SUPPORTED gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog 15 8 Op 1 14/0.000 + CDS 16795 - 18036 1007 ## COG1570 Exonuclease VII, large subunit 16 8 Op 2 . + CDS 18093 - 18380 455 ## COG1722 Exonuclease VII small subunit 17 8 Op 3 . + CDS 18381 - 18737 448 ## cauri_0940 hypothetical protein + Term 18786 - 18831 -0.9 18 9 Tu 1 . - CDS 18748 - 19338 494 ## cauri_0939 hypothetical protein - Prom 19460 - 19519 1.7 + Prom 19419 - 19478 2.2 19 10 Op 1 2/0.167 + CDS 19540 - 20559 1534 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 20 10 Op 2 . + CDS 20658 - 22058 2016 ## COG0114 Fumarase + Term 22074 - 22118 3.0 21 11 Op 1 11/0.000 + CDS 22387 - 23010 613 ## COG1309 Transcriptional regulator 22 11 Op 2 . + CDS 23004 - 24578 1934 ## COG0477 Permeases of the major facilitator superfamily + Term 24611 - 24652 7.0 - Term 24597 - 24638 8.2 23 12 Op 1 . - CDS 24659 - 25792 831 ## cauri_0934 hypothetical protein 24 12 Op 2 . - CDS 25874 - 26449 733 ## COG1247 Sortase and related acyltransferases 25 12 Op 3 . - CDS 26521 - 27879 1185 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH - Prom 28008 - 28067 1.9 - Term 28115 - 28166 17.1 26 13 Op 1 . - CDS 28214 - 28852 1064 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis 27 13 Op 2 . - CDS 28979 - 29680 495 ## COG0583 Transcriptional regulator 28 14 Tu 1 . + CDS 29707 - 30099 480 ## cauri_0930 hypothetical protein + Term 30158 - 30198 6.7 - Term 29974 - 30009 1.1 29 15 Tu 1 . - CDS 30096 - 31397 1881 ## COG0112 Glycine/serine hydroxymethyltransferase 30 16 Tu 1 . + CDS 31594 - 32520 973 ## COG1072 Panthothenate kinase + Term 32723 - 32770 2.2 31 17 Tu 1 . - CDS 32535 - 33122 487 ## COG0020 Undecaprenyl pyrophosphate synthase 32 18 Op 1 . - CDS 33327 - 33620 261 ## PROTEIN SUPPORTED gi|19552214|ref|NP_600216.1| hypothetical protein NCgl0949 33 18 Op 2 . - CDS 33624 - 34514 634 ## COG2120 Uncharacterized proteins, LmbE homologs 34 19 Tu 1 . + CDS 34607 - 35098 441 ## cauri_0924 hypothetical protein 35 20 Op 1 . + CDS 35216 - 35737 814 ## COG0782 Transcription elongation factor 36 20 Op 2 . + CDS 35787 - 36041 426 ## cauri_0922 putative secreted protein + Term 36066 - 36104 6.4 - Term 36056 - 36092 1.4 37 21 Op 1 . - CDS 36132 - 37952 672 ## cauri_0921 hypothetical protein 38 21 Op 2 . - CDS 37976 - 38647 -100 ## gi|306835712|ref|ZP_07468718.1| hypothetical protein HMPREF0277_0975 Predicted protein(s) >gi|227860908|gb|ACLH01000012.1| GENE 1 189 - 1451 956 420 aa, chain - ## HITS:1 COG:no KEGG:cauri_0956 NR:ns ## KEGG: cauri_0956 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 420 1 420 420 796 100.0 0 MTTAAATRPSTAFFSITNPNNPHAIARAAARRSIYDTWQAAMPSLQADINTTALSLVAAW SLPEGHIKAGLRAIHRLDSLPKVKAIQDTHCLLDIESLIAIDQPMSALTALTDETLDLID TVLADFFTPTKANQAFPTRSQIRRKVRDLCKTLDDSIAFRDTRPKDAYRFSSNGTTAWLE LQVKEDTGIKLDAFIRKTAAQHDLTIPEAVIKLLSGEIKPPATVVLHTYQACDIENAPTY VEGFGWRQEAMPHDKTRDLTGDIPEADGYQPGIIMRKHVEGRDGTCRVGGCEEPAFLTQL DHRHNWADGGPTHPKNLACLCQGHHNMKTDGTLKYLLDPYSGDVIWLFVDGTWTITEAEG PLAPKQKRWAQTVAQHITATRKRIREEAQHLKQELDDYAQQAKAKAEAQTDTDSGEDIPF >gi|227860908|gb|ACLH01000012.1| GENE 2 1722 - 2912 1182 396 aa, chain - ## HITS:1 COG:Cgl1466 KEGG:ns NR:ns ## COG: Cgl1466 COG0477 # Protein_GI_number: 19552716 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 6 386 14 400 403 307 51.0 3e-83 MSQTSSESQSLITPTFVFAWLVNFAQFSVFYLLVTIMALYAVEQFQASDTAGGFASSAFV VGATIARLFSGYIVDAAGRKRSLVVSLIVVTVAMALYFPAQSLPLLFAVRILHGFGYAVA STAVMAVAQSVIPDHRRAEGTGYFALGTTLATAFGPAAGLAIVHNAGYNTVFLVALTLTV VAMGLGLIVKAPAQERRSVSFSLGNIVHPAVAPFGVFILLVGVAYTGIITFLNGYSAQAG LEKGASYFFLAYAVVSLILRFVLGKLQDRRGDNIIIYSSLVFFIAGLAVLASAVADWQII AAGALVGIGYGSILPAGQAIAVRLVPMHEMGAGISTFFLLLDLGIGFGPILLGQVISATG YSAMYWMLAALLLVASVVYFSVHGRKDIARGDVRYE >gi|227860908|gb|ACLH01000012.1| GENE 3 3014 - 4309 1236 431 aa, chain - ## HITS:1 COG:MT1821 KEGG:ns NR:ns ## COG: MT1821 COG0277 # Protein_GI_number: 15841239 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 5 431 1 427 428 244 32.0 2e-64 MDTPMTTTFSNWAGSVTTKPQELVQPSRIDEIPGIISRSRSVRAVGAGHSFTPIAAGEET MLNLDHVSGLVSVDKQRKRVRFLAGTRLRDVPALLRPFGLALANQGDVDPQSLAGAISTS THGTGINYTGFAGTVTGLTLIDADGNTRTYSIDEDPELLRLVVVSVGALGVVVEVEMQCV DAFDLLAEESGIAFDELMDNWEELSRDVDHFESYWFPHTDRAMVKANTRLEPNGERRSRL KALIDDELIGNGAFAAALTLGRLIPGTIPMLNKFATSVISHNRYRSAAHDVFVSPRRVRF HEMEYAVPLADGPATVREIRRFIDEQDWRIGFPMELRTTAADDVALSTASGRESMYIAFH IPRALNPQDYMPKLEPIFRAAGGRPHWGKMNSLSRNDFAQLYTRFDEFCQLRENMDPEWK FGSPYLRKLFG >gi|227860908|gb|ACLH01000012.1| GENE 4 4294 - 5466 772 390 aa, chain - ## HITS:1 COG:Rv1769 KEGG:ns NR:ns ## COG: Rv1769 COG3616 # Protein_GI_number: 15608907 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid aldolase or racemase # Organism: Mycobacterium tuberculosis H37Rv # 27 389 35 413 414 235 43.0 1e-61 MPILATTPQAQVRAAVEPLVRSGESPAPVGVIDLAAFDYNAAQMLTRSGGLPIRVASKSI RSVAALRRALEHEGYRGILAYSVPEALHLVEEGFRDIVVAYPSVNRKALRELAADDIARE SITIMVDSVELLGLLEGTLRVAIDIDCTLHLPGAVIGPRRSPVRTPDQVSVLAREILRRG HRLVGLMAYEGQVASVADGLPGPVGAVKRWLRTKSMADLAPRRRACVEAAREVADIEFVN GGGTGSLQESAAEGTLTELAAGSGFYTPAIFDDFTGINHKAAAFFVCQVSRVPAPGWATV NSGGWIASGPPAKDRVPLPVWPAGLSYSSTEGAGEVQTPLHGADLNVEDLVWFRHAKAGE MTENVDRLLAVGNDGVDVWDTYRGQGWTLR >gi|227860908|gb|ACLH01000012.1| GENE 5 5557 - 7104 1668 515 aa, chain + ## HITS:1 COG:MT1772 KEGG:ns NR:ns ## COG: MT1772 COG1012 # Protein_GI_number: 15841194 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 38 490 33 491 518 385 46.0 1e-106 MKTFTQTRLPQRVLNFLDTDPTRDVCGTGEQHQAHAPFTGEELFSFPVATAGDVEKAVNY ARAGVGQGDRAAILLRLHDLVHENEELILDLIQAENGKSRSHAYDELMDLYNCARFYAVN IRKAFGADRHPGALPVLTKTRTQHYPLGVVGLISPWNYPLSLGVGDVLAALSAGNAVVHK PDSQTTLTAILLRRLAIEAGLPEAAWQLVPGRGAEVGDALVPLVDGLSFTGSTKAGKSIA TQAAGRLIPTMLELGGKNPMLVLDDAPLKPTAQGAVRTAFSSSGQLCMSAERAYVHESVV EEFLAELQNALDQQVLGAAFSDAATIGSLTSQRQLDAVKAHVEDAVSKGATVVYGGKARP DLGPYFYEPTVLTGVTPEMDLYATETFGPVLAVYAVSSDAEAIQLANDTTYGLSASVWSG NSRRAWKVASQLEAGMVNINEGFAAAYGSIAAPGGGVKESGLNHRHGITGMRLWANERTV AEQRLHPLAPSEYISPERFRQLVSTGMQLMKTFRL >gi|227860908|gb|ACLH01000012.1| GENE 6 7122 - 8087 391 321 aa, chain + ## HITS:1 COG:no KEGG:cauri_0951 NR:ns ## KEGG: cauri_0951 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 321 1 321 321 613 100.0 1e-174 MKELTRDELLARRLIAQGLAPSAARPTLASALDVAEHLLALQGQTYDAGIRALSLRAGCD EQKVLEDISHFRVVRCWPQRGTLHFMPAADVRWMSRLLYPRVASSQKSRRPSLGLSEEMF ETCSEALHNAATSPLTRAQVYELFAEAGVDPTEGRGSHLLRAFGGAGDLVQGPKAGSQET FLHVDALPTVQREPEEPLAELARRYVEGHGPVSAADLQTWSKLSKSQAAKALTSAVARPM RHDGQDFWMAPWQEDVTAGEIDAALKIRLELPAFDEYLLGYAHKEWIVPDEIRDDVLTKN GLSWPWVMEGGRGVASLRYAR >gi|227860908|gb|ACLH01000012.1| GENE 7 8089 - 9000 876 303 aa, chain - ## HITS:1 COG:sll1263 KEGG:ns NR:ns ## COG: sll1263 COG0053 # Protein_GI_number: 16330736 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Synechocystis # 17 291 12 285 310 244 50.0 2e-64 MSSLSSEQLLLERFMKLSIAAAVVTIVLKVIAAAVTGSVGFLSDALESGVNLVAAVVGFI AIKIAAKPADANHQFGHGKAEYVSALVEGAMIFVAAAMIIYTAIRRLLHPLPLEQPSVGL LLSLIAAVVNLVVGVMLVRAGKQYRSSTLQADGQHLLTDVWTSVGVIVGIGAVALTGWLW LDPVIALAVGINILWTGYKLLKESLSSLLSESLPKEEHAQLDALLNELEDHHQVSFTSRR TVAAGRQRLVYLTMDVPGEWTVLHSHTIADRIEDAIDELFSGAEVFIHVEPAGTVHRRVL RML >gi|227860908|gb|ACLH01000012.1| GENE 8 9229 - 9762 678 177 aa, chain - ## HITS:1 COG:DR1199 KEGG:ns NR:ns ## COG: DR1199 COG0693 # Protein_GI_number: 15806218 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Deinococcus radiodurans # 3 177 6 185 190 155 46.0 4e-38 MAELDNKTIAIIATDGFEDSELTSPLEAVKKAGATVCVLAPEAGKITGKNGTEIDVDATT AASTGEAFDGIILPGGTDNADMLRLDKSAVEIVRNHVTEERPLGVICHGAWILTDADVLK GRTLTSFPSLQTDLRNAGATWVDEEVHCDQGLVSSRTPDDLPAFNAKLVEEFAEGQH >gi|227860908|gb|ACLH01000012.1| GENE 9 9927 - 11141 938 404 aa, chain - ## HITS:1 COG:Cgl2031 KEGG:ns NR:ns ## COG: Cgl2031 COG1473 # Protein_GI_number: 19553281 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 3 395 4 419 421 299 42.0 5e-81 MSIAHILDRAAEVTQWQEALYKDLHQHPELSMEEERTRGVIADKLREFPGVEVLEFGGGV VGILRNGEGSTVLERADFDGLPITEDTGLDYSATGEAMHACGHDAHVAGLLGATEALAKA TDAWSGTFVALFQPGEETAEGAQSMVNAGLTDKVPTPDVAFGQHIFIDKNAPAGSVLIAP GPVLSTATSLTVTVYGHGSHGSMPHLSVDPVVLASSIVLRLQTIVSREVDPHQFAVLTVG ALQAGSKANIIPDSATLRINIRAYDEDVRAQIVEAIHRIVKAECRAARSPCEPEFAQSDN YPLTVNDEDVTEKVRAQLIDVLGSDNVLDMEPWTASEDFSRIPDAFGAPYCFWGFGGRTD GASIPNHNPRFAPELQPTLTTATQALIAAAYAYLGNQRKDVLKE >gi|227860908|gb|ACLH01000012.1| GENE 10 11173 - 12258 1451 361 aa, chain - ## HITS:1 COG:Cgl1003 KEGG:ns NR:ns ## COG: Cgl1003 COG0012 # Protein_GI_number: 19552253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Corynebacterium glutamicum # 1 358 1 358 361 543 84.0 1e-154 MSLTLGIVGLPNVGKSTLFNALTRSDILAANYPFATIEPNVGLVELPDSRLNRLAEIFSS ERILPATVSFVDIAGIVEGASKGEGMGNAFLANIREADAICQVVRAFADENVIHVDGEVN PAHDISVINTELILADLQTIEKALPRLEKEARKNKDLAETVEETKKAQAILEDDRTLFAA SKNNEIDLALLRELHLMTAKPFLYVFNSDEAVLTDDAKKEELRQLVAPAECVFLDAQTET DLLELDEAEALELLESVGQEEPGLATLAKAGFATLGLQTYLTAGPKEARAWTIKQGSAAP QAAGVIHTDFEKKFIKAEIVSFDDLDAAGSMAEARNAGKVRQEGKEYIMQDGDVCDFKIG G >gi|227860908|gb|ACLH01000012.1| GENE 11 12306 - 13799 1351 497 aa, chain + ## HITS:1 COG:Cgl9099 KEGG:ns NR:ns ## COG: Cgl9099 COG0628 # Protein_GI_number: 19552249 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 45 431 45 431 490 443 58.0 1e-124 MSSDQPSPNASSSEFAAAEAALGGRFDDSVDAASLNAVSPHPPGNQVDRSVVVSEVIKSA SLWALRLTIIGIFLYASFRMLGNFWRGILPVLIALIICTVLAPIASAMRRKGLPSALAAA VTILVSFTAVGALFMFIAPDFARQSQTLYLQTVEGIQRLQLWAQGPPLNLDADEIGGYID EIALWLQRQAGSIAGSVFTGIGTATSIVVTLFIIVVLTFFFLKDGHNFLPWLRQATGRRT GWHLTELLTRVWSTLGGFVRAQAVVSAVDAVFIGLGLALIGVPLAMALAIITFIAGFIPF VGAIVAGALSVTIALVSLGFTKALLVLGLVLLVQQLEGNVLSPWLQSKAMNLHPVIVLIS VTVGSALFGLIGGFLAVPAAATIAVVYRYFQDMMMLQSGERTAEDLEFSTVAGFLIGRYT QQQGDHKREQWLSIPDHAAPEGAAEDVAHNGTSTLDQKLEANVDVDADFSERDGGARAGI KRAISALEQMLQSKGKD >gi|227860908|gb|ACLH01000012.1| GENE 12 13806 - 14906 829 366 aa, chain + ## HITS:1 COG:CC0271 KEGG:ns NR:ns ## COG: CC0271 COG1322 # Protein_GI_number: 16124526 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 33 353 66 400 429 184 36.0 2e-46 MSGTHAMMTGMTSSLPVVLLFLGLIIGAALGWLARAYSAQSAQPSEEHRALQESQRRQAE LAPLEKAMDRLGLQIQEIEEDRATSLAALSSQVQAVTRTSTRLSDRTDKLVGALRSPNVR GRWGEVQLERVVELGGMRKHVDFDSQVSARINGSLVRPDLVIHLAGGRSIVVDAKVPLSA YLDAMETEDPEERAGYLRRHAHLMRSHVQALASKDYIEAFSPTPQFVVLFVPADTFVDAA LSIDAELLEFAFERNAVIATPSTLFALLRTVAVSWQHEEISDKAREVQRLGRDLYTRLNT LNEHYDKVGRGLERAVEAYNASLASLDSRVGVTARRLKDLDVPARVDRLPVEPRSVGSWP RRAQNE >gi|227860908|gb|ACLH01000012.1| GENE 13 14984 - 15685 438 233 aa, chain + ## HITS:1 COG:Cgl0998 KEGG:ns NR:ns ## COG: Cgl0998 COG1113 # Protein_GI_number: 19552248 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Corynebacterium glutamicum # 1 223 1 200 254 87 33.0 3e-17 MPLSRALLVALVVTLVALAVSGILGSVGLPFALIFGLGSLAVTWLVETRGLYMTVISLPL LYALGTVVGGFINSTAGLPEGASPFSKTAILTTAFPLLQHFPVLIVTVVACALLAVLRLW RSDSHAKDLEAEAQEKRRAEVASDRRSRSERLSVAELLAREATGSGRVRERDREERRRIQ AEERAKRRQASPDADEREDFRRAAAESAENARRARERSQRSSQPLEENLYDED >gi|227860908|gb|ACLH01000012.1| GENE 14 15682 - 16671 331 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168184863|ref|ZP_02619527.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / ribosomal protein S1 homolog [Clostridium botulinum Bf] # 18 293 3 272 644 132 29 4e-30 MSATFDTVGAMTETAKKVLLAAPRGYCAGVDRAVETVEKALEKYGAPIYVRKQIVHNRFV VESLAERGVIFVEEASEAPEGAHLVFSAHGIAPSVRKEAQERKQLTLDATCPLVTKVHKE AQRFERDGYQILLVGHEGHEEVEGTAGEAPDVTHLVDGLEGVDKLPDFLHEEKLIWLSQT TLSVDETIQIVNKLRERFPHLENPPSDDICYATQNRQESVKAIAPKCDLMIVVGSENSSN SKRLVEVALEAGSKTSHLVDFASEIDEAWLEGVNTVGVTCGASVPELLVREVLEFLDERG YNDVEQVTTSTETITFSLPRELRPARTAR >gi|227860908|gb|ACLH01000012.1| GENE 15 16795 - 18036 1007 413 aa, chain + ## HITS:1 COG:Cgl0996 KEGG:ns NR:ns ## COG: Cgl0996 COG1570 # Protein_GI_number: 19552246 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Corynebacterium glutamicum # 6 413 10 417 417 561 73.0 1e-159 MNQPANSAETPWPVGKVNDQVKGWIERLGFLWVEGQITQLNMKPTWKLSYITLRDVEQEK SVQLTCNTSLIRNAPSPLKDGDRVVVYGKPAFYAGRGSFSLWVTEIRHVGIGDLLARVEM LRQKLRQEGLCDPSRKLPLPYLPKKIGLITGRGSHAERDVLSVAQDRWPAVQFNVINTAV QGATAVTQVIDALRTLDADPEVDVIIIARGGGSVEDLLPFSEEALQRAVAEARTPVVSAI GHEPDHPVLDDVADLRAATPTDAAKRVVPSASKEYALISEARSRMAAALRGWVDRERRGL ENIRSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVSALGPSAT LERGYAIVQVLPRDGSGPEVVTSYTQSPPGSQLRIRVGDGSITAAAMASQAAD >gi|227860908|gb|ACLH01000012.1| GENE 16 18093 - 18380 455 95 aa, chain + ## HITS:1 COG:Cgl0995 KEGG:ns NR:ns ## COG: Cgl0995 COG1722 # Protein_GI_number: 19552245 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Corynebacterium glutamicum # 3 78 5 79 81 96 75.0 1e-20 MTDTIGAGQPGQDAFPPVEELSYEQARDELIETVKILELGQMGLDESLKYWERGEALAKA CEAHLDGASKRVEEALRKNAEGTDSAAHNEEAGED >gi|227860908|gb|ACLH01000012.1| GENE 17 18381 - 18737 448 118 aa, chain + ## HITS:1 COG:no KEGG:cauri_0940 NR:ns ## KEGG: cauri_0940 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 222 100.0 3e-57 MKIYGYPGDRVDFVSKSGGAGSMVFGDSRQLAEEFFGPPHTANSEEIGYFSGSIVLRFSE NRLSEIAVFPGKSLHEKVDVYLGKTRLSGLDPESLTSAAGDSVEVEWDGTTLQSVTFR >gi|227860908|gb|ACLH01000012.1| GENE 18 18748 - 19338 494 196 aa, chain - ## HITS:1 COG:no KEGG:cauri_0939 NR:ns ## KEGG: cauri_0939 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 196 1 196 196 357 100.0 2e-97 MASEDKPKIFEDARDITLTVGVILIMMFLAVGATGLCSINPEKSGPVQNVDAATFLEMEA RGSGAVIREPDMPEGWQPTAARRKQMGGESGAVVSWLTTNDGYVESAQTQLALGDVPGAY DSNYRANSERREVAGQDVEILSSDDKDVRPLWITDLGDARLVLTGSASDADYEAALTAFT EAEPLQIAEDGSVISE >gi|227860908|gb|ACLH01000012.1| GENE 19 19540 - 20559 1534 339 aa, chain + ## HITS:1 COG:Cgl0990 KEGG:ns NR:ns ## COG: Cgl0990 COG1494 # Protein_GI_number: 19552240 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Corynebacterium glutamicum # 9 332 9 332 335 478 80.0 1e-135 MSDNTSYIPDRNLAMELVRVTEAAALASGRWVGRGQKNEGDGAAVDAMRKLINSVEMNGV VVIGEGEKDEAPMLFNGEKVGTGQGAEMDIAVDPVDGTRLMAEGRPNAISVIAAAERGTM YDPSAVFYMKKIAVGPEAVGAIDLNESVEWNVKSVAKAKGIKPADLTVVVLDRPRHDDLI RQIREAGAKVRLIMDGDVAGAIATCQDSNSIDIMMGIGGTPEGIITACAMKCMGGEIQGK LWPKDEEEAEKARKAGHDLDRVLTTNDLVSSENCYFAATGVTNGDMLRGVSYRPNGATTR SLVMRSKSGTIRYVDSIHKLAKLQEYSVVDYTNPHDKES >gi|227860908|gb|ACLH01000012.1| GENE 20 20658 - 22058 2016 466 aa, chain + ## HITS:1 COG:Cgl0981 KEGG:ns NR:ns ## COG: Cgl0981 COG0114 # Protein_GI_number: 19552231 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Corynebacterium glutamicum # 3 465 5 467 469 700 80.0 0 MTEYRIEHDTMGEVKVPVDALWRAQTQRAVENFPISGRGLEDAQIRALGLLKAACAQVNK DSGKLDAEKADAIIAAATEIAEGKHNDAFPIDVFQTGSGTSSNMNTNEVIASIAHKNGVE IHPNDHVNMGQSSNDTFPTATHVAATEAAVNDLIPGLKVLHDSLLAKAKEFADVVKSGRT HLMDATPITLGQEFGGYARQIELGIERVEATLPRLGELAIGGTATGTGLNTDAEFGGKVT EELKKLTGIDQLSEAKNHFEAQAARDALVEFSGAMRTVAISLNKIANDIRMMGSGPLTGL AEIHLPDLQPGSSIMPGKVNPVLSEAATMVVSQVIGNDAAVAFGGSNGHFELNVYIPMMA RNVLESSRLLANVSRVFAEKCVDGIEANEERMKKFAESSTSIVTPLNSKIGYENAAKAAK HALNEKITVREAVIDLGFVDGENLTEEELDERLNVLTMTNRDRDNF >gi|227860908|gb|ACLH01000012.1| GENE 21 22387 - 23010 613 207 aa, chain + ## HITS:1 COG:Cgl0375 KEGG:ns NR:ns ## COG: Cgl0375 COG1309 # Protein_GI_number: 19551625 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 19 147 6 140 202 78 36.0 7e-15 MQEELSLREQKRLKTRLRIEDAATLLVDEHGFAAVTVEEICEKAGISRRTFFNYFDSKDS AVLGNPSQEFSQEQKSYLLETPTENIFKLAVDLIKEHLIGQHANREIAERRRRISRDADA AAASLSRKRAKSNEVLELLTQRLEKEPTLKTMPDVSPHTEALLIASTIREAFWLATTSPD FSCDIPFEQRFDSALALINNYSKGLSW >gi|227860908|gb|ACLH01000012.1| GENE 22 23004 - 24578 1934 524 aa, chain + ## HITS:1 COG:Cgl0376 KEGG:ns NR:ns ## COG: Cgl0376 COG0477 # Protein_GI_number: 19551626 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 38 522 64 547 549 509 56.0 1e-144 MVATAKPSVANTDNGKPENNLVLVFSALVLTMLMSSLGQMIFASALPTIVGELGGVDHMS WVISAFLVTMTIAMPISGKLGDMMGRKWLYIGGIATFVIGSTVGGFANSMNLLIIGRAIQ GFGAGFMMISSQSIIAEVTTARERGKFMGIMGGVIGLSSVLGPVLGGWFTDGPGWRWGLW MNIPLGLLAMTVCVLVLHLRVGDTDLRKFDALGATFIAITTASLILMTTWGGTQYEWSDP VILTLAVIVVIGAVITVFVEKRAKEPLIPVLLFKNRNMVLTTAAGMVLGLAMFGVLGYMP TYLQMVHTLTPTKAGLMMIPMMLGMIGTSTTVGFVIARTGHYKRYPIIGLAITAGALFWM SKLTVDTSLTQLGAEFLVFGIGLGFVMQVLVLIVQNSFPVALVGTATAANNFFRQIGSAM GASLVGSLFIHNMKDELAANMPAAIASMGNAGAPFAEKFSAEGGGSSSLTPSMVAQLPDP IRDVILNAYNDGLTPVILLMVPMAIIALLLILPVREEHLKETID >gi|227860908|gb|ACLH01000012.1| GENE 23 24659 - 25792 831 377 aa, chain - ## HITS:1 COG:no KEGG:cauri_0934 NR:ns ## KEGG: cauri_0934 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 377 1 377 377 640 100.0 0 MSFRTSVLALSTAVAVSTGAFAAPVATAATYPSAGSVPVAELDVNLPNGALAYVFAEPVM QSDIDLVTRQVRELRGKAWDDNLPFNGGTLRQAASAAGYRTRDAYVNSISWDRGLEHAAM QRAAEENLDFNHLRLPGVPPFGVIDNLWAGENLTTSGMSEAIASWSTDKYQGASEWDMLI RSNGKFNDRTGHLYSIIDPTHVTFAQAQVGEVTAGFFSNRDMSGEPARISGRHAFPIAVS ESEVNGAELMTTGGTSVGSEGRLGLTIDGIQGAKLGVPVASPSSSDPEVLEVNEDGTYTA KSEGTATVTFNTYALHNGQPRLSANQVTKTVKVTKKSLLGSSSSGGSEVGTIVGIIAGLL ALIGVAAQVARQFGILR >gi|227860908|gb|ACLH01000012.1| GENE 24 25874 - 26449 733 191 aa, chain - ## HITS:1 COG:Cgl0974 KEGG:ns NR:ns ## COG: Cgl0974 COG1247 # Protein_GI_number: 19552224 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Corynebacterium glutamicum # 9 184 3 178 179 228 60.0 4e-60 MSDNAKDKKKDFRIRPFNAADYPQMREIYEQGLNTGHATYETRSLTFEEFKNVKIMSSVF VAVEEDDDSKVLGWVCAAQASTRTVFHGVVEDSIYLSKEAQGRGIGGALLDQLIEVCRDL HKWAIHSWIFPENEGSAGLHKSRGFVKVGTYSHMAKMTYGELAGQWRDTDVYELLLPKPE EKKAEANQKRK >gi|227860908|gb|ACLH01000012.1| GENE 25 26521 - 27879 1185 452 aa, chain - ## HITS:1 COG:MT1127 KEGG:ns NR:ns ## COG: MT1127 COG1875 # Protein_GI_number: 15840534 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Mycobacterium tuberculosis CDC1551 # 18 449 4 427 433 585 71.0 1e-167 MTNPSVLTEQPHEAAVATKTYVIDTSVLLSDPWALRKFAEHDVVLPIVVISELEGKRHHP ELGWFARQALRFLEDLRATYEALDQPLPVNAAGGTLRVELNHQDQSLLPVAFRGPEGDHR ILACALNLQHEGKVTVLVTKDVPLRVKAGAVGLQADEYHAQDVVLTGYTGMAIVPTSAEV IDELYGEGEVLIDGSVTTAGTRVEDLPVHCGVTLQAGGQSALGRMTAEGTVRLVRGDTNV FGLQGRSAEQRVALDLLVDPCVGIMSIGGRAGTGKSALALCAGLEAVLERGEHRRIVVFR PMYAVGGQSLGYLPGSESEKMNPWAQAVYDTLEGLVSENVMEEVQDRGLLEVLPLTHIRG RGLHDSFVIVDEAQSLERNVLLTVLSRLGRGSRVVLTHDVAQRDNLRVGRHDGVQAVIEK LKGHELFAHVTLQRSERSAIAELVTDLLEGEN >gi|227860908|gb|ACLH01000012.1| GENE 26 28214 - 28852 1064 212 aa, chain - ## HITS:1 COG:Cgl1439 KEGG:ns NR:ns ## COG: Cgl1439 COG5479 # Protein_GI_number: 19552689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 2 211 9 202 205 84 41.0 2e-16 MKKMTRRFAAGIAAATLSLGVVACSDAEDAAKEAGDAAQSAASDATDAAGSAAQDAKDSM KDSESADPSDAEGAEDADSSEADSADSEGGAEGDKESVSTANGDVEVPADFAQAIKEKAA EWGAPESIETTDKGSVATFAKDKLLAFAEGEGTQPIIGKIAETWNEEGGLESKVGLPTAP EQAEGNGWVQEFTNGTISWLQGESGEYEATIN >gi|227860908|gb|ACLH01000012.1| GENE 27 28979 - 29680 495 233 aa, chain - ## HITS:1 COG:Cgl0973 KEGG:ns NR:ns ## COG: Cgl0973 COG0583 # Protein_GI_number: 19552223 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 232 1 219 224 196 50.0 3e-50 MLRLVFATGTEPGKWFRRYRDSHSPESLVTVDADDAMAALLAHEADLALTRLPDPRVDDG FHVVRLYVEAPGIAVPKDSVYAEVGEDISPEDVAEEIVNFRIAQDGSVDVSALRTALQVV AANVGVAIAPRPLLKVLSKTQVVALGLEDPSVARTEIALVWRREDDGDEIQDFVGVAKGR TRNSSRNTAEKRSARDKAKAKQERRKAQGKSHKGSISKPLPKRYRGSQQRKRK >gi|227860908|gb|ACLH01000012.1| GENE 28 29707 - 30099 480 130 aa, chain + ## HITS:1 COG:no KEGG:cauri_0930 NR:ns ## KEGG: cauri_0930 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 130 154 283 283 211 99.0 8e-54 MVSVTDTPNSETPTNETQQPSGTAMRAQTAAKKLGIYLPATPEEFQANAVTHAQLRDLQE NPPEWLATLRREGPHPRPVVAQKLGISVTALKKNEMDRPLTTAEIKELLSAMPEWLEAAR KAHAEERSEA >gi|227860908|gb|ACLH01000012.1| GENE 29 30096 - 31397 1881 433 aa, chain - ## HITS:1 COG:Cgl0969 KEGG:ns NR:ns ## COG: Cgl0969 COG0112 # Protein_GI_number: 19552219 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Corynebacterium glutamicum # 8 433 9 434 434 714 83.0 0 MTTTNNSDVRYQEMRDLDPEVFDAISGEIARQRDTLEMIASENFVPRAVLQAQGSVLTNK YAEGYPGRRYYGGCEHVDVVEDLARDRAKALFGADFANVQPHSGAQANAAVLASLIQPGD KIMGLSLAHGGHLTHGMKLNFSGKLYDVAAYEVDPETMRLDMDKVREQALAEKPQVIIAG WSAYPRTIDFEAFRSIADEVGAYLWTDMAHFAGLVAAGLHPSPVPHSDVVSSTVHKTLGG PRSGLILAKQDFAKKINSNVFPGQQGGPLMHVIAAKAIALKIAATEEFKERQERTLEGAR ILAERLTAEDCTKAGVDVLTGGTDVHLVLADLRNSELDGQQAEDLLHEVGITVNRNAVPN DPRPPMVTSGLRIGTPALATRGLDAAAFTEVADVIGTALANGKNADVAKLRARVEKVAAD FPLYDGLEDWKLV >gi|227860908|gb|ACLH01000012.1| GENE 30 31594 - 32520 973 308 aa, chain + ## HITS:1 COG:Cgl0968 KEGG:ns NR:ns ## COG: Cgl0968 COG1072 # Protein_GI_number: 19552218 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Corynebacterium glutamicum # 3 308 17 323 323 480 79.0 1e-135 MARMTDASPYLDFDRDTWRALRKSMPQVLTANEVEKLRGIGDRIDLTEVAEVYLPLSRLI HMQVEARQKLTAATEAFLGNPPTHVPFVIGVAGSVAVGKSTTARLLQVLLERWESHPKVD LVTTDGFLYPTAYLKEHGLMQRKGYPESYDRRALMRFVTDVKSGKPLVTAPLYSHVSYDI VPGEFQEVRQPDILILEGLNVLQTGPTLMVSDLFDFSVYVDARVDDIEKWYIDRFLKLRH TAFREPGAHFASFADMTDEEAYVQAREIWQSINLPNLIENILPTRVRASLVLRKGSHHLV DRVRMRKL >gi|227860908|gb|ACLH01000012.1| GENE 31 32535 - 33122 487 195 aa, chain - ## HITS:1 COG:Cgl0966 KEGG:ns NR:ns ## COG: Cgl0966 COG0020 # Protein_GI_number: 19552216 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 1 195 31 225 225 275 65.0 4e-74 MISWCQGTDIEVVTIYLLSTENLKRSEQEVQLLFDIISDVVTHLSQGDLDCQIRLVGHLD LLPEQVTAKMQCAAEATEDHQGVIVNIAVGYGGRQEIVDAVQSLIRSESEKGLSAEEIAE NVTAEAITGNLYTKGLPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYWPAFRRVDFL RALRDYSQRSRRFGR >gi|227860908|gb|ACLH01000012.1| GENE 32 33327 - 33620 261 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19552214|ref|NP_600216.1| hypothetical protein NCgl0949 [Corynebacterium glutamicum ATCC 13032] # 13 94 22 103 106 105 59 5e-22 MNALYFAAHDVALLAQGSQSGPVGPEFGKASPIGLLILALMGVAVLFAGWNFHRRYSRFR RRTMFAQDHGIDPFDDEAVDAAMKEAGILDNSKKSIF >gi|227860908|gb|ACLH01000012.1| GENE 33 33624 - 34514 634 296 aa, chain - ## HITS:1 COG:Cgl0963 KEGG:ns NR:ns ## COG: Cgl0963 COG2120 # Protein_GI_number: 19552213 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Corynebacterium glutamicum # 7 290 1 280 285 426 72.0 1e-119 MSTKRLLAIHAHPDDESSKGAATTAKYAAEGAEVLVVTCTGGERGDIINPAMDRPGVLEN MGSIRREEMAEAAAALGVQHRWLGHVDSGLPGNPLAPNIKDLLPDGCFALKEDDEVAQEL VEIIREFRPHVIITYDENGGYPHPDHLMVYRASMLAWENAGDAAYHPELGEPWEPLKLYY THGFVYQRMKIFHDLLVEEGKVSPYEPMLARWDTAFGDIMARVTTQVECADYFQNREDAL RAHATQIDPAGAFLATPVSVQQEHWPTEEFELAKTRVSTALPEDDLFAGIPEVGEA >gi|227860908|gb|ACLH01000012.1| GENE 34 34607 - 35098 441 163 aa, chain + ## HITS:1 COG:no KEGG:cauri_0924 NR:ns ## KEGG: cauri_0924 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 163 1 163 163 312 100.0 3e-84 MSDAQPASRSARSQSRYGSTNSSPLTGGSWTNRALVLVFLGMLVAAIVFGVQYFRGQQKV NADISYVTHEILSDDSMRIWVDITRNRVEEPAYCIVQAFDYAKAEVGRREIAVPAGGESA QRVAVDIPTNHPAVAGGVYGCSGNIPSYLDTSTMDTAGEATDN >gi|227860908|gb|ACLH01000012.1| GENE 35 35216 - 35737 814 173 aa, chain + ## HITS:1 COG:Cgl0961 KEGG:ns NR:ns ## COG: Cgl0961 COG0782 # Protein_GI_number: 19552211 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Corynebacterium glutamicum # 1 171 1 171 174 226 82.0 2e-59 MAEQQKQYITPETKAKLEAELQALIDHRPVVAAEINERREEGDLKENAGYDAAREMQDQE EARIKQISEVLANSTTERTAVQEGVAHIGSVVHVYYNGDEEDRETFLIGTRAAASDNKDL ETYSEQSPLGAALLGAAEGETREYTAPNGKTLSVTVVSAAPYDSAKAATPRKS >gi|227860908|gb|ACLH01000012.1| GENE 36 35787 - 36041 426 84 aa, chain + ## HITS:1 COG:no KEGG:cauri_0922 NR:ns ## KEGG: cauri_0922 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 84 1 84 84 82 100.0 4e-15 MKKFTRFAAAGLVFSAGLTLAACHPPSEQDSTEKVDTGATFTGEAPGSGAAASSEAAAET EVAETGVAGTEVAPAGYTTAPVQQ >gi|227860908|gb|ACLH01000012.1| GENE 37 36132 - 37952 672 606 aa, chain - ## HITS:1 COG:no KEGG:cauri_0921 NR:ns ## KEGG: cauri_0921 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 111 606 1 496 496 701 100.0 0 MIINQENLNQEVDAINNLGQNLSLATQRVHSPLDGGFSTVTGLSEVGAIHQRVLATDPGS ARNSLEGFRGQVSWLGEALQTELASFESQDELTSRGLDVADAGGGGGASSMPIVSQPDPG YSPFGFTVPIVDPGASIMGLASNLFSTRFWDVSEANARWGALSGEVADIVAGLERSAASL ESENDSEATTRAAQKIREVAQAGTHFIANANVMQQKLFGFQAQLVNVQPEAIALAFEVAA IPDPVARAAAERAALTYMQGVLQQQVISAMPYQHALMDAAPPSGGGDTSTHFGAVAGDGN RYNTDGVAWPQKIAEAIQSGAVGPGSFDVANGQIQGLEGVGMGPEDIAKFHGELQNRGRG ILSDLGFGEALAPIDAAEVNTSAASAGIGALNPVHGTMTGATTAPGGAPYAAGGLNGLGS VGLAEGRGSQLPGGIAGLNGRLPEASANPTTSAAGLGGLNSSFGGPQTGTHPVLGGLPGA GTGAGQQREGRASLSSSGLLGSNAGSGAVGMGGVAGPGGAGAVGNAGGVVGAAGGAHGAK SGVGNARGAGMRMMPLMGGMARGGDGERRIKSVTTQVERDPNRRDLLGEAPAVLPGVIGD WAREEN >gi|227860908|gb|ACLH01000012.1| GENE 38 37976 - 38647 -100 223 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|306835712|ref|ZP_07468718.1| ## NR: gi|306835712|ref|ZP_07468718.1| hypothetical protein HMPREF0277_0975 [Corynebacterium accolens ATCC 49726] hypothetical protein HMPREF0277_0975 [Corynebacterium accolens ATCC 49726] # 1 218 1 231 237 65 28.0 4e-09 MKRIGGLVLMAVCIGVLSNCASPLGLGARDHGDNPGDFHNFPGDNTGGGSGDSGVADATA TRSREDQASRGEPRAGGGVLPPLGEFDRTVPGFQVFDPCTTETQAVFEDLGLVSTGSVKR QTGYRSCQFEAQDQGGSKASVTVASRDFTISEVRSAFPDGVEATGEEAKSIYLVEESFIT NATCTGYMETVQGTISISWTNLSDAISIADNCKNVERLASAAI Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:05:45 2011 Seq name: gi|227860907|gb|ACLH01000013.1| Corynebacterium aurimucosum ATCC 700975 contig00013, whole genome shotgun sequence Length of sequence - 68392 bp Number of predicted genes - 61, with homology - 58 Number of transcription units - 35, operones - 14 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 696 - 754 18.5 1 1 Tu 1 . - CDS 776 - 1597 922 ## COG4760 Predicted membrane protein - Prom 1697 - 1756 2.8 - TRNA 1835 - 1911 65.4 # Leu TAA 0 0 2 2 Op 1 4/0.000 - CDS 1990 - 2952 1268 ## COG0248 Exopolyphosphatase 3 2 Op 2 4/0.000 - CDS 2969 - 3517 471 ## COG1507 Uncharacterized conserved protein 4 2 Op 3 11/0.000 - CDS 3552 - 4130 568 ## COG2919 Septum formation initiator - Term 4191 - 4226 5.8 5 2 Op 4 3/0.000 - CDS 4292 - 5569 1936 ## COG0148 Enolase 6 2 Op 5 . - CDS 5712 - 6503 640 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 6698 - 6757 1.9 + Prom 6596 - 6655 3.3 7 3 Tu 1 . + CDS 6743 - 7165 689 ## cauri_0912 hypothetical protein - Term 7067 - 7106 6.4 8 4 Tu 1 . - CDS 7162 - 7779 552 ## COG1694 Predicted pyrophosphatase 9 5 Tu 1 . + CDS 7861 - 9348 2162 ## COG0531 Amino acid transporters 10 6 Op 1 . - CDS 9345 - 9827 465 ## cauri_0909 hypothetical protein 11 6 Op 2 3/0.000 - CDS 9827 - 13465 4324 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 12 6 Op 3 . - CDS 13441 - 14085 292 ## COG1309 Transcriptional regulator - Prom 14244 - 14303 69.7 + TRNA 14236 - 14310 45.3 # Gln TTG 0 0 - Term 14215 - 14285 21.8 13 7 Tu 1 . - CDS 14305 - 15030 517 ## COG2860 Predicted membrane protein 14 8 Op 1 . + CDS 15102 - 15578 -101 ## gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein 15 8 Op 2 . + CDS 15629 - 16312 -201 ## Ctu_10250 hypothetical protein + Term 16404 - 16453 1.6 16 9 Tu 1 . + CDS 16630 - 17124 -475 ## gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein 17 10 Tu 1 . + CDS 19110 - 19601 -269 ## gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein 18 11 Tu 1 . + CDS 20214 - 20711 -350 ## gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein 19 12 Tu 1 . - CDS 21620 - 22111 349 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 20 13 Op 1 . + CDS 22415 - 22561 61 ## 21 13 Op 2 . + CDS 22618 - 22875 87 ## 22 14 Op 1 . - CDS 23247 - 23963 233 ## cauri_0902 CRISPR-associated protein 23 14 Op 2 . - CDS 23980 - 25134 1007 ## cauri_0901 CRISPR-associated protein 24 14 Op 3 . - CDS 25169 - 25837 299 ## cur_1971 CRISPR-associated protein 25 14 Op 4 . - CDS 25830 - 27575 644 ## cauri_0900 CRISPR-associated protein 26 15 Tu 1 . - CDS 27676 - 30348 496 ## COG1203 Predicted helicases 27 16 Tu 1 . - CDS 30496 - 30603 57 ## + Prom 30484 - 30543 2.3 28 17 Tu 1 . + CDS 30640 - 31002 295 ## cauri_0898 hypothetical protein 29 18 Tu 1 . + CDS 31305 - 31754 249 ## cauri_0897 hypothetical protein + Term 31798 - 31843 1.2 - Term 31598 - 31642 -1.0 30 19 Tu 1 . - CDS 31751 - 33457 1573 ## COG2132 Putative multicopper oxidases 31 20 Op 1 . + CDS 33456 - 34715 1170 ## cauri_0895 hypothetical protein 32 20 Op 2 11/0.000 + CDS 34781 - 36244 1826 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 33 20 Op 3 9/0.000 + CDS 36269 - 37243 1433 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 37349 - 37397 5.2 34 20 Op 4 22/0.000 + CDS 37448 - 38104 1075 ## PROTEIN SUPPORTED gi|227832720|ref|YP_002834427.1| 50S ribosomal protein L25 + Term 38125 - 38182 16.1 35 21 Op 1 . + CDS 38195 - 38743 415 ## COG0193 Peptidyl-tRNA hydrolase 36 21 Op 2 . + CDS 38749 - 39627 729 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Term 39763 - 39803 2.5 37 22 Op 1 . + CDS 39848 - 40156 265 ## cauri_0889 hypothetical protein + Term 40181 - 40211 1.2 38 22 Op 2 . + CDS 40232 - 41137 1463 ## COG2326 Uncharacterized conserved protein + Term 41323 - 41374 4.8 - Term 41316 - 41357 7.8 39 23 Op 1 1/0.286 - CDS 41374 - 42828 2307 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 40 23 Op 2 . - CDS 42893 - 43876 737 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 41 24 Op 1 . + CDS 43915 - 44595 672 ## COG0193 Peptidyl-tRNA hydrolase 42 24 Op 2 . + CDS 44637 - 45494 895 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 43 24 Op 3 . + CDS 45519 - 47150 2254 ## COG4108 Peptide chain release factor RF-3 44 24 Op 4 . + CDS 47227 - 48237 1083 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 45 25 Tu 1 . - CDS 48234 - 49733 1401 ## COG2610 H+/gluconate symporter and related permeases - Prom 49820 - 49879 1.7 46 26 Tu 1 . + CDS 49905 - 50417 306 ## cauri_0880 HTH-type regulator, TetR family + Term 50490 - 50522 -0.1 - Term 50319 - 50373 3.9 47 27 Op 1 2/0.143 - CDS 50386 - 51273 1058 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 48 27 Op 2 . - CDS 51286 - 52800 1884 ## COG1012 NAD-dependent aldehyde dehydrogenases 49 28 Op 1 . + CDS 53033 - 55672 1914 ## COG1042 Acyl-CoA synthetase (NDP forming) 50 28 Op 2 . + CDS 55669 - 56802 1054 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Term 57004 - 57036 -0.6 - Term 56723 - 56762 2.2 51 29 Op 1 6/0.000 - CDS 56862 - 57611 207 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 52 29 Op 2 . - CDS 57692 - 58900 1359 ## COG1960 Acyl-CoA dehydrogenases - Prom 59006 - 59065 2.9 53 30 Tu 1 . + CDS 58985 - 59689 462 ## cauri_0873 putative transcriptional regulator 54 31 Tu 1 . + CDS 59852 - 61582 1961 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Term 61607 - 61642 6.0 + Prom 61627 - 61686 1.9 55 32 Tu 1 . + CDS 61715 - 62215 359 ## COG1846 Transcriptional regulators 56 33 Op 1 12/0.000 - CDS 62349 - 63113 1037 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 57 33 Op 2 20/0.000 - CDS 63182 - 64243 993 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 58 33 Op 3 . - CDS 64281 - 65570 798 ## COG0183 Acetyl-CoA acetyltransferase 59 33 Op 4 . - CDS 65615 - 67180 1597 ## COG2985 Predicted permease - Term 67262 - 67296 0.2 60 34 Tu 1 . - CDS 67308 - 68177 766 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 61 35 Tu 1 . + CDS 68213 - 68390 149 ## cauri_0865 hypothetical protein Predicted protein(s) >gi|227860907|gb|ACLH01000013.1| GENE 1 776 - 1597 922 273 aa, chain - ## HITS:1 COG:Cgl0959 KEGG:ns NR:ns ## COG: Cgl0959 COG4760 # Protein_GI_number: 19552209 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 4 273 11 285 286 301 66.0 8e-82 MKGIGIRVRSSNPVMSSLSSSQSQTQVNPYGQNDNPFNQGNRSADRPLTVDDVVTKTGIT LGVIIVMAVLNFAIGELVNPGIAMILTLVGALGGFVTVLVSTFGKKFGSAAVTLIYAVFE GLFVGGFSLMFAGVSFGNSDGMALIGQAIMGTVGVFIGMLMVYKTGAVKVTPKFNKIMFG LIAGVAVLALGNMLGAIFFGFNPLRDGGMLAIIFSLVCIVLASLSFMTDFDQADRLIRQG APAQYAWGIALGLAVTLVWLYTEILRLLSYFRD >gi|227860907|gb|ACLH01000013.1| GENE 2 1990 - 2952 1268 320 aa, chain - ## HITS:1 COG:Cgl0952 KEGG:ns NR:ns ## COG: Cgl0952 COG0248 # Protein_GI_number: 19552202 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Corynebacterium glutamicum # 1 314 1 313 321 395 66.0 1e-110 MTRVAAVDCGTNSIRLLISEIQEDGKIRDISRTMEIVRLGQGVDATGEFEPEALARTRAA LENYVKQMKFEKVERVRMVATSATRDAKNHREFFDMTEELLGQVQPGARAEVISGEEEAL LSFTGAVGDLHSEEGPYCVIDLGGGSTEFVVGTIDGEILGSHSAQMGCVRLTERIMRNDP PTEAEIEIATDYVAERMAEVEKIVPIDKALTFVGCAGTFTTLSALAQGMERYDADSIHGS ELRFDALRVLTRQMIGLPSDVRALNPVIHPGRADVIGGGCVAVEGIMTMIERNSEARSFF ISEKDILDGIITGLAAKLLS >gi|227860907|gb|ACLH01000013.1| GENE 3 2969 - 3517 471 182 aa, chain - ## HITS:1 COG:Cgl0951 KEGG:ns NR:ns ## COG: Cgl0951 COG1507 # Protein_GI_number: 19552201 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 182 1 182 184 284 77.0 5e-77 MTVTDADLEVVREQLGRTPRGVVDIAYRTPDGAPAVIKTAPKLPDGTPFPTLYYLTDPRL TAEASRLEVAHVMKWMEQRLAEDEDLKKDYQAAHEHYLTTRNAMEDLGTDFSGGGMPERV KCLHVLIAYALAEGPGRVRFGTEAVAMAAEHGKLRGSAIPEDWPTVGDLGIDMAQFDFSN AG >gi|227860907|gb|ACLH01000013.1| GENE 4 3552 - 4130 568 192 aa, chain - ## HITS:1 COG:Cgl0950 KEGG:ns NR:ns ## COG: Cgl0950 COG2919 # Protein_GI_number: 19552200 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Corynebacterium glutamicum # 33 181 5 150 180 113 39.0 2e-25 MTRVISETRRAPHSTGAGPGYNGFPMARTISPRTKRRNTVPVHTRARDAQRTKRKKTPVQ PKGLDILGVGVIIAVVLVVLLSIAVPLRNYYHGQSEIARLESSIAAKQAHKEHLLTEIDK YNSEEYVKQEARRRFGVMDEGETAFRIMDPRMDSGDTVTSERREDTDDREWYTVLWDSVA EEAENQSEAPAE >gi|227860907|gb|ACLH01000013.1| GENE 5 4292 - 5569 1936 425 aa, chain - ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 425 1 425 425 698 87.0 0 MADIIHVMAREILDSRGNPTVEAEVFLDDGARGVAGVPSGASTGVHEAHELRDGGDRYLG KGVLKAVENVNEEIADELAGFEADDQRLIDQALIKLDGTENKSRLGANAILGVSIAAAKA AAESAGLPLYRYVGGPNAHVLPVPMMNIVNGGAHADSGVDVQEFMIAPIGAESFSEALRI GAEVYHALKSVIKSKGLSTGLGDEGGFAPEAESTKAALDLIIEAIKKAGFEPGKDVALAL DVASSEFFKDGKYHFEGGEHTAEEMAKVYEELVAKYPIVSIEDPLQEDDWEGYTKLTETL GDKVQIVGDDFFVTNPARLQEGIDKKAANALLVKVNQIGTLTETFDAVELAHRNGYRTMM SHRSGETEDTTIADLAVALNCGQIKTGAPARSERVAKYNQLLRIEQELGDAAVYAGRSAF PRFQG >gi|227860907|gb|ACLH01000013.1| GENE 6 5712 - 6503 640 263 aa, chain - ## HITS:1 COG:Cgl0948 KEGG:ns NR:ns ## COG: Cgl0948 COG2951 # Protein_GI_number: 19552198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Corynebacterium glutamicum # 10 261 2 253 254 314 62.0 8e-86 MTQGLRRIGGCGLGIVLAIILIISLVAWSLSFLDKPSPFRQLSPVPEDLPPVGGVEVPNI DVEGPGRTADKLTWWSDQLADATSIPDQALRAYGNAELIARQSWPNCNLRWNTLAGIGWV ESRHGTYNGNLFHRSSLDENGYPDPPIVGIPLDGTNNTTMVPDSDGGVIDGDSEFDRAVG PMQFIASSWEHLGRDANGDGVADPNQIDDAALGAAALLCFGDRDLSTPEGWRSAVLNYNQ SEDYLRKVAAAANSYAIEQPATS >gi|227860907|gb|ACLH01000013.1| GENE 7 6743 - 7165 689 140 aa, chain + ## HITS:1 COG:no KEGG:cauri_0912 NR:ns ## KEGG: cauri_0912 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 1 140 140 202 100.0 3e-51 MSIRRILATASAVVTLGAIAPATASAASLTELGGFLSQGIQSADCNTLRSTLTLIDQSTE GELLTPDTTRNQLSKNLTALGNSAELGPLAFAAVKYAGQTADRALECKIVKEDTIATGGT GLSSKIADYAPLLSSMIQKG >gi|227860907|gb|ACLH01000013.1| GENE 8 7162 - 7779 552 205 aa, chain - ## HITS:1 COG:Cgl0945 KEGG:ns NR:ns ## COG: Cgl0945 COG1694 # Protein_GI_number: 19552195 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Corynebacterium glutamicum # 1 203 1 187 195 148 48.0 7e-36 MTVLLLDPRWPTLIPMEAVGKLQGPVVFTDEVPVKVRWDFDQLLCGEDPAGHGVVVSTDP SHPQVRALIDAHAELILAPSLEEPMWQAREVMTRARRIGEWERDQTHETLLPYLEEESAE FAEAVREHASDAELLKELGDVFLQILFHAEIAARRGAFNLDDVAMSFVNKMRSRAPYLFD GSEDIVGVEEQERLWAEGKAREKKD >gi|227860907|gb|ACLH01000013.1| GENE 9 7861 - 9348 2162 495 aa, chain + ## HITS:1 COG:Cgl0943 KEGG:ns NR:ns ## COG: Cgl0943 COG0531 # Protein_GI_number: 19552193 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Corynebacterium glutamicum # 12 495 17 501 501 598 69.0 1e-171 MTTSNLTESPRTHSVTLWTLVALIIGSTVGAGIFSLPQNIASVAGPGAMLIGWLIAGVGM LSVAFVFQILAHRKPHLDSGVYSYVRAGLGDFIGFTSGWGYWLGSVMAQVGYATLFFNTI GHYVPFFDADHRWVSAIAVSLLSWGIFAVLARGIKQAAIMNMVTSVAKIVPILAFIVILA FVGFSWDKFTLDIWGKASDKSLFEQVQGIMLFTVWVFIGVEGASVYSKQARTRSDVGRAT VIGFISVLALLVSVSTLSFGVLTQEELAALPDNSMASVLTAAVGEWGGALISLGLCLSVL GAYVSWQMLCAEPIVMMAVDGLLPRKIGTVNIAGAPWVAQLISTLTIQLFVIVFFLNETS YNAMVQLATIMYLLPYIFSSLYLVLLAVRGKGLTHPHAGVRFDISGPEMSHRENRRHLFI GLVAFIYSIWLIYAADPVYVLLGALAVVPSMIPYVATRLYKKERVFNTFEWFVVALVIIG AVAAVWGLGTGRLVL >gi|227860907|gb|ACLH01000013.1| GENE 10 9345 - 9827 465 160 aa, chain - ## HITS:1 COG:no KEGG:cauri_0909 NR:ns ## KEGG: cauri_0909 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 160 1 160 160 277 100.0 1e-73 MDAANNHIGPSRANPRIIMMVVWMFAALFSIPVSLVIKFSGENGGWLTFILVMFGIFLVG FWVFLGLLPLFIRSDYASRLEWAWASMALAFIGFIVGNANLPDFGDIGPATVPTWWFGNE EAASITGGIFLVVSAIGHVLWLVSCIAYAVLSHRSAPEAF >gi|227860907|gb|ACLH01000013.1| GENE 11 9827 - 13465 4324 1212 aa, chain - ## HITS:1 COG:Cgl0938 KEGG:ns NR:ns ## COG: Cgl0938 COG1197 # Protein_GI_number: 19552188 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Corynebacterium glutamicum # 1 1209 1 1212 1214 1870 78.0 0 MLGGLLKVAASDPKLKGLASQVGEASLHITGIDQARPWAIGTLAHHAPVLVVTASGREAE DLTAELTAMLGDKVAYFPAWETLPHERLSPAADIVGKRARVLDLVGAGKAQVVVTSARGY CQPILSKVEGRAPIFLKEEDEHELSHILSELEFRAYKHVDMVAKRGEYATRGGILDVFPT TSDYPVRVEFWGDEITDIRQFSVADQRAIPEIEVGEVAIYPARELPITNEVAARARELAR KFGGNAALAELLTKVGEHIPAEGMEAVLAVLADVPFVTLPELLAAGTHVLLVAPEKIRTR IADLESTDAEFLAAGWEAAAMGADGPLAAEGLDTSASSYRSYESLETTCRNIEAPLWTFA PPGMFAAAESETLPLDFEPGPTPRGDITEIDAMMAQLLAHTTAGGRAAFIAPAQGAIKRM VERFAEKGIPTKVATPGWEPSPGEVTLYQALSHAGLVFPKVRKLKDAEALPLVVITETDL TGNRVGDIAGAKRRPAKRRNRVDPLALKQGDYVVHETHGIGKFLKMAERTVQSGDETSRR EYIVLEYAASKRGQPADQLWVPMDSLDLLSKYTGGEAPTLSKMGGSDWKNTKKKARAAVR EIAGELVELYAKRQAAPGHQFGPDTPWQAEMEDNFPFVETEDQMLAIDAVKEDMESTVPM DRVVVGDVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHADTFRERMQGFPVDIEV LSRFTSAKESKEILAGLADGSVDIVIGTHRLLQTGVQWKNLGLIVVDEEQRFGVEHKEHI KALKASVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPVLTYVGAYEDKQVAAAI RRELLRDGQVFFIHNKVADIEKKARELRDLVPEARIVVAHGQMNEDVLERTVQGFWDREF DVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATL TETSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAEQSGHIAGVGFDLYVRLVGEA VETFKALARGETPVVTDEGPKEIRIDLPVDAHIPESYINSERLRLEVYRKLAASKENADL AHVVEEMQDRYGPVPEPVERLLAVARLRHQARRAGVSDITVQGTRIKVHPVELADSKQVR LKRLFPGSNYRAAAKAIQLNFPKAGRNVTDPKLRDIELLQWMADFLASMFELERVDVSGA KTKKNVISVGEK >gi|227860907|gb|ACLH01000013.1| GENE 12 13441 - 14085 292 214 aa, chain - ## HITS:1 COG:Cgl0937 KEGG:ns NR:ns ## COG: Cgl0937 COG1309 # Protein_GI_number: 19552187 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 202 1 202 217 302 76.0 2e-82 MVRQRMTGRERREQLISIGRAAFAERGFDGASVEDIAARAGVSKPVVYEHFGGKEGLYAV VIDRELVALEKVVTDSLQTGSWRERIEQGVVALLTYVEEETDGFLILVRDSKPGEERSFS TLLNTAVNQIAHILGEAFEHRGLDPELAVLYGQALVGMVATTAQWWLDVREPSRETVAAH IVNLCWNGLSGMEAAPKLKGVSRWQRRCWAGCSR >gi|227860907|gb|ACLH01000013.1| GENE 13 14305 - 15030 517 241 aa, chain - ## HITS:1 COG:Cgl0134 KEGG:ns NR:ns ## COG: Cgl0134 COG2860 # Protein_GI_number: 19551384 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 2 228 5 232 239 244 58.0 1e-64 MIQDVDPLIHFLYQVFDLIGVVLNGIIGGTIARRREFDIIGFVFLALFSALAGGMIRDML ISHGPAAAISDPWYLTLACVGALIAFLTDLKGKAWEIFLEHADAVILGVWCTTGCVKALA YGMPFIACVFLGVLTAVGGGMVRDVASGQVPSVFGGSPLYAVPAVLTGIVMATFGHFDKF ALGMIISPFVGFGLAVMAYWRGWVLPRAGIAPLNYTAAQVASIARRAEIRGFRRGRRKRN S >gi|227860907|gb|ACLH01000013.1| GENE 14 15102 - 15578 -101 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255324885|ref|ZP_05365994.1| ## NR: gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] # 45 143 85 187 401 72 49.0 1e-11 MTRSTHRLQPSKASQSKNPSKDDSKFPATQIGDKGCSMGLAPACPIHTYLRGKHRSKYTD QWIPEGSSPFTRGALRTMSPCTVLVRLIPAYARSTRHRCLGLSIVGAHPRLRGEHSLPMT ARMFSLGSSPLTRGALTFSLRIRRLGGSSPLTRGAPVI >gi|227860907|gb|ACLH01000013.1| GENE 15 15629 - 16312 -201 227 aa, chain + ## HITS:1 COG:no KEGG:Ctu_10250 NR:ns ## KEGG: Ctu_10250 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 33 225 3 195 197 73 31.0 5e-12 MKTFAQEYSGWGSSPLTRGALAFLFPGEDGGGLIPAYAGSTEAREVPPDGPGAHPRLRGE HVTVPADIGRVKGSSPLTRGALFDAYTNVTKGGLIPAYAGSTMVWDGAKAVFTAHPRLRG EHDTEHFPLAPLWGSSPLTRGAPLKIVHDSSPMGLIPAYAGSTTRCPWLYRQSRAHPRLR GEHSRTSRAITRRVGSSPLTRGAPIDWLRDFADWGLIPAYAGSTALV >gi|227860907|gb|ACLH01000013.1| GENE 16 16630 - 17124 -475 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255324885|ref|ZP_05365994.1| ## NR: gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] # 4 155 147 298 401 100 51.0 4e-20 MDRAHPRLRGEHDFRAKAKRLGMGSSPLTRRARPVLPIGPWDPGLIPAYAGSTSSASRPA LARTAHPRLRGEHASETSPDSPTPGSSPLTRGAPPPVHDDEAWAGLIPAYAGSTPRKMSK RASARAHPRLRGEHTDDLGLGKGFRGSSPLTRGARAYQVALRDA >gi|227860907|gb|ACLH01000013.1| GENE 17 19110 - 19601 -269 163 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255324885|ref|ZP_05365994.1| ## NR: gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] # 10 163 146 299 401 108 53.0 1e-22 MGIAKLGISGAHPRLRGEHDRESYSFLACSGSSPLTRGAPFNVTGDTERQGLIPAYAGST EAQRRSTSAWWAHPRLRGEHFHIIAHSVGRDGSSPLTRGARTQARKDMNSSRLIPAYAGS THNLAARKEVNRAHPRLRGEHLRFAHAGELGEGSSPLTRGARR >gi|227860907|gb|ACLH01000013.1| GENE 18 20214 - 20711 -350 165 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255324885|ref|ZP_05365994.1| ## NR: gi|255324885|ref|ZP_05365994.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] # 6 159 22 175 401 105 53.0 1e-21 MGVEIPIGAHPRLRGEHYRPATIPSTCWGSSPLTRGAPDRDIGQRVKCRLIPAYAGSTPP RELIRTRTGAHPRLRGEHASSRAAIASAEGSSPLTRGARDVATRQRGKRGLIPAYAGSTQ LIRNDLMAVGAHPRLRGEHHFARFYCAFRAGSSPLTRGARRRSIR >gi|227860907|gb|ACLH01000013.1| GENE 19 21620 - 22111 349 163 aa, chain - ## HITS:1 COG:ygbT KEGG:ns NR:ns ## COG: ygbT COG1518 # Protein_GI_number: 16130662 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Escherichia coli K12 # 1 121 145 265 305 107 41.0 1e-23 MKKVYEAESKRTGVYWNRRSYDPNDFDSSDPINQALTAASAALYGVAHAVIAALGFIPAL GIIHNGTDRSFVYDIADLYKAEISIPAAFDAVAAAKGNPSTEVRRHVRDYVVSHRLMPRM VKDLKSLFDIPDDELVSDVELMLWSELEVIASGVNWSEEETLS >gi|227860907|gb|ACLH01000013.1| GENE 20 22415 - 22561 61 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDAPLVHYRERIAITIHYTAFSVKKTDPVPYARQGLACDRDLMWRSH >gi|227860907|gb|ACLH01000013.1| GENE 21 22618 - 22875 87 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKSGAEQRRICDLQGATIAGRYNTDVASVPTFAEIKGPPLHDGCFIFYRPTCSFFRRHG VIGARSQRKTNLFRPRIEPLKLVIY >gi|227860907|gb|ACLH01000013.1| GENE 22 23247 - 23963 233 238 aa, chain - ## HITS:1 COG:no KEGG:cauri_0902 NR:ns ## KEGG: cauri_0902 # Name: casD # Def: CRISPR-associated protein # Organism: C.aurimucosum # Pathway: not_defined # 1 238 1 238 238 446 100.0 1e-124 MTSSLLLLLKAPLQSWGNESRYATRTTSQIPSKSGVLGMLAAAEGRRRTDGIEDLARLTF AVRVDQSGSLLRDYQTAQDWQRNPNASAKLVTRYFLSDAAFVAAIEAEDRGLLEGLAEAL NKPAFPIFLGRRSCPAPPNLVQGIDDIPAVESLQAHSTWHATKEYMKTCGEKVALPIYRD AKPGELGESLQDVPVSFDPRHRKYSWRTVVQRESAMVDNPLDASQLRPDPFMEAVMNA >gi|227860907|gb|ACLH01000013.1| GENE 23 23980 - 25134 1007 384 aa, chain - ## HITS:1 COG:no KEGG:cauri_0901 NR:ns ## KEGG: cauri_0901 # Name: casE # Def: CRISPR-associated protein # Organism: C.aurimucosum # Pathway: not_defined # 1 384 1 384 384 698 100.0 0 MSLVIDIHALQTLPPSLINRDDTGAPKSAIFGGVPRQRVSSQSWKRAIRNYFEKNVDPEF VGDRSKRLPEKIAKLVENHDGWDSERAIKQVSDLFKAAGISTEVDSKRIKELEKSDAEDK EELIKEASYPRTKYLIFLSPQQIDRAVRAIVDADGEKIKKAEAKVILDTQHSVDMAMFGR MIADDAAFNVDAAVQVAHALGIHSSAPEFDYFTAVDDLAEDGEETGAGMIGTVQMMSSTL YRFATVNVAGLTKNLASEENAKQAAVQFVDAFIKSMPTGKINTFANHTLPELVYVTVRDT RPVSLVTAFEEPVQATDDKNLRLAGAEALAKEEREFEENYGLKPLAAFAVGVSEARAPFA DIAETVTLPELSERLTAALDSSQS >gi|227860907|gb|ACLH01000013.1| GENE 24 25169 - 25837 299 222 aa, chain - ## HITS:1 COG:no KEGG:cur_1971 NR:ns ## KEGG: cur_1971 # Name: casF # Def: CRISPR-associated protein # Organism: C.urealyticum # Pathway: not_defined # 1 222 18 231 231 171 50.0 2e-41 MTNTSTSTDYPSTSTGPTLRQAVARTANDLQFAILRSPNHSQSAQARATLARLRKYASVP LNDQPLALEEVLLILHPPLSEKELGRGNAPSASESAAFHALVMFGIHMQSATTDAHVEGQ SFARACGRFFAQSESQSTKPRFDAMLVSRDEASRLIHIRSLITLLRGAKIGFDYGQFAQD LRILSARTSTQADQDRRQGVLLRWGRDFATGAFVKSTKATES >gi|227860907|gb|ACLH01000013.1| GENE 25 25830 - 27575 644 581 aa, chain - ## HITS:1 COG:no KEGG:cauri_0900 NR:ns ## KEGG: cauri_0900 # Name: casF # Def: CRISPR-associated protein # Organism: C.aurimucosum # Pathway: not_defined # 1 581 1 581 581 1106 100.0 0 MTDTSTFNLLDEPWIKCMDGTNQPVSLSIRDIFSGRGDAYKVVGDSPTQDYAVLRVLLAI FWRAHALELVESYADDNWEDFDWPEWFDELREQLVNEKRDDVVLEYLDGYEDRFDLLSPS APFMQVADLHTKSGATRPVSFIVPEAADDFFTMRTAEGRESLALDEAARWLIHTQAFDFS GIKSGAEGDPRVKGGKGYPIGTGWTGRTGGTIILGEGGILETLILNTPPSAVLDSQEGGA VSADTPVWEREPDTAAQRPGSSDDIGAVPHGAVDLATWQARRIRLFFEGDRAVQVLVSNG DRIPDAGKNVMGDPMTPYRYSPNQSKKGTPAYYARPYDPTRTMWRALDALIALEDDPGFD NGKNKAPKRPRNLSNLAALEADGYLDKSLLDLALVSMEYGPQESSVASTFIATIGLPLVV LRADETGRKVRNAVRTSAEKTGKAAISLGWFAGQLLVAAGGDYEFGSSTADRFYARLEPL FLTWMTGLISDNAEEWQIDWQKQVREQVLRDARELLRGAGTKAIVGREVDAGDSGKGRIV SAGSLYRQLHRRLDKDLPLTTSLTIPGTGASGNSHEDDSDD >gi|227860907|gb|ACLH01000013.1| GENE 26 27676 - 30348 496 890 aa, chain - ## HITS:1 COG:ZygcB KEGG:ns NR:ns ## COG: ZygcB COG1203 # Protein_GI_number: 15803278 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli O157:H7 EDL933 # 36 637 66 673 899 193 29.0 1e-48 MDFLTLPQHMVDSACAASFLYNSWLAASVKRYLAGELGIDEVGVESLYVWLAGCHDIGKS VKTFQRLLLESDKAHLVHAVSDAGLDIDLSVDEANFDKLPHGVASGEILSQWLCARGVRL PKANALAAVVNAHHGIANKPSTQVRALIEEYPESWKRVHKELLDAMTELCGADSVIEIVG RGNKLHQGVAEILTGLVVMADWMASNEHAFTLHVSGTQLERVEAAAAAIDVTMPWEPEKG DWRDIDAHFRCSFDWPEEYCARPVQRAVVEAAQQLEGPALVVIEAETGVGKTEAALAAAE ILGANSAAQGVFFAAPTMATANGLLERTIEWASNNSVDSVKSMYLAHSKNVLSEPYRQLK FSQIGKDSGEGGGVIASQWMSGRRLGLLSNFVVGTVDQVLMMALQQRFHMLRHVGLAGKV IIFDEVHSFDVYTSDYLQRTIEWLGYYGASVILMSATLPPDKRRSLVQAYSCASWPDEEP IGYPLLTLATRDSVEFHSVPPMPTNLEARIEYLDDDVEKLVTFAEQYLDKGGCALIICNT IARAQEAYRVLEGVYGDEVQLHHAGFVAWERVAKEDALREELGPDSHRGSGRPQRKIVVA TQVAEQSLDIDADVLVTDIAPMDLIIQRIGRLHRHTRPATDRPEKLQQPRVIIRGILKRQ PVPEFDSGAEFIYGQTLLLSTYAMLPEVFHRPDDIEGLVRAAYDKNFTPPVEWDEVWEKA QAQNLFAEDSAHSKSSTFRLPSPRRRTSYDALFSQLISDDAASGDERGAAQVRDAEPSVE VIPIRSTEYGYQPWGVEEEVLDGTELSYNVAFHLASSTVRLPTRMTRWESDFEAVVSTLE EATPAQWRSHFLLRGQLALPLDESDTAQLGRFTVTYSSKLGIEILSDGRK >gi|227860907|gb|ACLH01000013.1| GENE 27 30496 - 30603 57 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARHEAYIAIVKEQFSENNELANAIDAMLVLNHFL >gi|227860907|gb|ACLH01000013.1| GENE 28 30640 - 31002 295 120 aa, chain + ## HITS:1 COG:no KEGG:cauri_0898 NR:ns ## KEGG: cauri_0898 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 120 17 136 136 249 100.0 4e-65 MLNTITSPRQRGFLLSGTPNLRALGPGIVYVVNMASPLDFKRLELDSNTPIGPIFPANER CGIYVIEFDNGTKYVGQSIDVVKRFRNHTHGSNHHESWGDVVALSFAPAPSLELDILKNK >gi|227860907|gb|ACLH01000013.1| GENE 29 31305 - 31754 249 149 aa, chain + ## HITS:1 COG:no KEGG:cauri_0897 NR:ns ## KEGG: cauri_0897 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 24 149 1 126 126 257 99.0 9e-68 MSDYPSTAGGRYATLNTGILEFLVFPRNNILDHIPDLEPTFRDSFTLGTGFFNLLPSEGI DWDAEPDAIWISNSPRHLVMHYEYEVTSVEAFYFPIGQLEETFKALGPEVISDARKFAVT LMRNRPSNLFRRWHSSALVGRAYEKIVNG >gi|227860907|gb|ACLH01000013.1| GENE 30 31751 - 33457 1573 568 aa, chain - ## HITS:1 COG:Cgl0921 KEGG:ns NR:ns ## COG: Cgl0921 COG2132 # Protein_GI_number: 19552171 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Corynebacterium glutamicum # 31 528 4 493 513 565 56.0 1e-160 MTVILSPARSNPGSKVHLISILGGMSISARPTVSRRIFVQGSVLTVAGAAVMGLSACSTS GSKNQPEPLGYDSEPRALPIPPVEEGEVVDGTRVFKLTAQDGYSEILPGNDRTRTWGFNG AFLGPTLRARRGEKVRAEITNDLIEMTTVHWHGMKLPAYSDGGPHSPIEVGKTWKPEWEI IQPAATLWYHPHPHMATATHAYRGLAGMFLIDDDVADGLDLPQDYGVDDIPVVIMDAKFT DDGQIDEKSDNTLGLLGTTPLVNGITNARFDATTRRVRLRLLNGASMRFYTLELSNGPFH VIATDTGLLDAPVEVDSLFLGPGERAEIIVDLEPGKEVQLRSVPRKDNFGVPKDKDAADF GFQDSFDLLTISGPEESAPEPPALPETLDPAAAKTPSTEGLEEREFVLNTFMINGEQMDM ARVDTVIDHDAPEIWTVTNENSDWPHNFHIHNARFKVLEWDGDEKMDVFNSGWKDIVNLP PKVTARLLVEFGHFPDKTIPYMYHCHMLLHEDEGMMGQYVMVNKGEKPDVRVKPAALVFE QIATAHSAHAGQVVDSSRSPYATPEAKA >gi|227860907|gb|ACLH01000013.1| GENE 31 33456 - 34715 1170 419 aa, chain + ## HITS:1 COG:no KEGG:cauri_0895 NR:ns ## KEGG: cauri_0895 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 419 1 419 419 640 100.0 0 MASRSATSQGSSSSEESANARRFVWSNGLQGVGDQLLSGKTVLPWLFSVAGVPAFFTGLL VPLRESGSMLPQAALTPWVVSNPARKRLWVLGSVGQGLCAAIIAAAAGLVEGPLLGLIIC LALAALAVLRALCSLTGKDVQGRTISKGHRGVVTGRATQLGGAVTLITGVILAVLGELPR WGLAVMLAIGAATWFLAAAVFRTIEEPVPDDAGQKGLNRSWWTDTWKLYTQDSRFRSFVN VRALLLVSALSTSFIVVLSQSIGSQALSGLGGFVLASGLASLVGGRVSGVLSDKSSRLVM SWGAATAAIILLAIVACATWAPTEVSMWALPLGFFLVNLAHTAIRVARKTYVVDMAGEDK RTRYVGAANTMMGVILLVIGGISAVIALAGPSAAILFLACTGLFGAWRARALPEVSREK >gi|227860907|gb|ACLH01000013.1| GENE 32 34781 - 36244 1826 487 aa, chain + ## HITS:1 COG:Cgl0919 KEGG:ns NR:ns ## COG: Cgl0919 COG1207 # Protein_GI_number: 19552169 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Corynebacterium glutamicum # 8 467 9 468 485 625 74.0 1e-179 MAEVTNCAAIVLAAGAGTRMKSSTQKTLHEIGGRSLLGHALHAAAGLNPEHLVVVVGHQR DQVSPAVDAISEELDCAVSQAVQEEQNGTGHAVQCGLSALPEFDGTVIVTNGDVPLLRPE TLRQLHEAHTGEANAVTVLSMTLEDPTGYGRVLRADDGSVTAIVEQKDASEEQRKVREVN SGVFAFDGAVLRDALTKLNSDNAQGELYITDVLEIAREAGHRVGAHVAADPEELSGVNDR VQLAAAGRLLNRRMVEEAMRGGTTIVDPDTTWIGVNVTIGQDVVIHPNTQLWGATTIADG AEVGPDTTLTNIQVGAGASVVRTHGFDSVIGSNAQIGPFTYIRPGVIVGEEGKLGGFVEA KKTQIGRGTKVPHLTYIGDATVGDYSNIGASSVFVNYDGVNKHHTTIGSHVRTGSDTMFI APVTVGDGAYSGAGTVIKDDVPPGALAVSGGKQRNIEGWVQKKRPGTPAAEAAGKAQDAK ANDQTTN >gi|227860907|gb|ACLH01000013.1| GENE 33 36269 - 37243 1433 324 aa, chain + ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 1 322 1 322 325 559 83.0 1e-159 MTGKVTGSSKNMMLFTGRAHPALAEAVAKELKTDLVPTTARDFANGEIFIRFEESVRGAD CFVMQSHTQPLNKWLVEQLIMIDALKRGSAKRITAILPFYPYARQDKKHLGREPISARLV ADLLAAAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILTDYIKSKYPMDNLAVVSPDAG RVKVAEKWAHELGDAPLSFVHKTRSNTEANKTVSNRVVGDVEGKDCILLDDMIDTGGTIA GAVRVLKEAGAKSVVIACTHGVFSDPARERLSECGAVEVITTDTLPQSTEGWDNLTVLSI APLLARTIHEIFENGSVTTLFETH >gi|227860907|gb|ACLH01000013.1| GENE 34 37448 - 38104 1075 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227832720|ref|YP_002834427.1| 50S ribosomal protein L25 [Corynebacterium aurimucosum ATCC 700975] # 1 218 1 218 218 418 100 1e-116 MANTRPVLKAEVRSEFGKGFARRLRAAGKIPGVVYGHAVDVLHFAVDRLEMTALVRNHGV NAVFELELEGEQHLVMVKHIDQNVLTFNIDHIDLLSIKRGEKVEVEVPVVLEGEPAPGLM FIQDADVLLVEADVLNIPEEIVVSIEGLEDGTVVTAGEVSLPEGTTLAAEEDTVIVSISE PEVDEDVEAAAEAAEEGGAEAGAESADESASEEKKDEE >gi|227860907|gb|ACLH01000013.1| GENE 35 38195 - 38743 415 182 aa, chain + ## HITS:1 COG:Cgl0914 KEGG:ns NR:ns ## COG: Cgl0914 COG0193 # Protein_GI_number: 19552164 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Corynebacterium glutamicum # 1 181 1 177 180 248 66.0 4e-66 MGSVTSSPFLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASFSVHKKTNTDVAEARRG DAKVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGHN GLRSTTKSLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRA LD >gi|227860907|gb|ACLH01000013.1| GENE 36 38749 - 39627 729 292 aa, chain + ## HITS:1 COG:Cgl2964 KEGG:ns NR:ns ## COG: Cgl2964 COG0179 # Protein_GI_number: 19554214 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Corynebacterium glutamicum # 1 274 1 278 279 285 51.0 9e-77 MKLATLRTSFGTCAIRIDGPNVGTELDYEDVGELLASPDWHKAAQLSGEPVVFEDSDLAP VIPNPGKIICVGVNYAKHAREMGRELPTQSTLFIKFPEALTGPFDDVYVPDYATKKLDYE GELAVVMGRRAHRVSVKDALDYVAGYAIMNDYTLRDYQRATTQFHAGKSFYRTAGFGPWL TTADEWAPGKAARLVTTVDGEVRQDDNTDDLIFSVAELIAFCSSLYPLNPGDVIATGTPE GVGFARGEDAMLGDGCVTRISIDGLGAIENTTRFGEPPAAGGCGEDCTCHGR >gi|227860907|gb|ACLH01000013.1| GENE 37 39848 - 40156 265 102 aa, chain + ## HITS:1 COG:no KEGG:cauri_0889 NR:ns ## KEGG: cauri_0889 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 102 4 105 105 110 99.0 2e-23 MTETAVATGTDADDAQQPADTAAVGDAGNAVDSGKLTGDEAFEKALAHAGVDAQAVTEKE VDYDDGDDGKGPHWEIEFKANGQEHELGVDAASGAVTQHEVD >gi|227860907|gb|ACLH01000013.1| GENE 38 40232 - 41137 1463 301 aa, chain + ## HITS:1 COG:Cgl0893 KEGG:ns NR:ns ## COG: Cgl0893 COG2326 # Protein_GI_number: 19552143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 12 274 17 279 320 423 80.0 1e-118 MSSQSKKSATKPPKLDKQAYEDELKRLQAELVEMQQWVVETGARVVIIMEGRDAAGKGSA IKRITQYLNPRTCRIEALPKPTDREAGQWYFQRYIEKLPTAGEIVIFDRSWYNRAGVERV MGFCSQQEYVRFLHQAPLLEHMLIEDGIILLKYWFSVSDEEQLARFKSRRNDPLRRWKLS PMDLQSITRWEDYSRAKDEMFVHTDTPSSPWYTVESEDKKRSRINVINHILKTVPYQHVE QDVPEIPNRPELEAEYVRPPRNDFAYVPDVAADLERAKVNGDGSGKKQGKKKKSKKDKKK K >gi|227860907|gb|ACLH01000013.1| GENE 39 41374 - 42828 2307 484 aa, chain - ## HITS:1 COG:Cgl0913 KEGG:ns NR:ns ## COG: Cgl0913 COG0057 # Protein_GI_number: 19552163 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 478 1 474 480 721 75.0 0 MTSNAHIGHEDWNERLELAQEMIPLIHQLHRNNNVVTSIYGRLLIGVTDIDIIKAHRYAR RIAERELSTAETLPILKELCSMNLGTASIDLGRLATGFEESGSDNLRNYLEETLVDLVGA AVDKESTDVVLYGFGRIGRLLARILIAREAAYGGVRLRAIVVRKKGDMDIFKRASLLRRD SVHGAFNGTIAVDEENEVIWANGTKIQMIYANDPADIDYTKYGIDNAIVVDNTGVWRDRE GLSQHLQSKGVARVLLTAPGKGDLKNIVYGINHGDIEDSDQILSAASCTTNGITPVLKVI NDRYGVVHGHVETAHSFTNDQNLIDNFHKGDRRGRAAGLNMVLTETGAAKAVSKALPEFE GKLTGNAIRVPTPDVSMAVLNLELEKEADRDEVNDFLRNVSLHSDLRQQISYIASPEVVS SDFVGSTHAGVVDSLATISSGKHLVLYVWYDNEFGYSNQVIRIVEDIAGARPVVYPKRVD VSEL >gi|227860907|gb|ACLH01000013.1| GENE 40 42893 - 43876 737 327 aa, chain - ## HITS:1 COG:Cgl0912 KEGG:ns NR:ns ## COG: Cgl0912 COG2070 # Protein_GI_number: 19552162 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Corynebacterium glutamicum # 4 325 3 339 341 232 46.0 6e-61 MSQLLETITCPVLPAPMAGGPTTPELVAAADAAGSFSALGLGTCSVDVARETIAACAGTR FGVNIFHPQRALTETELAAAQSLAAEEGVVLGDVSLNFGWQDKLEAAVEGGAAVLWSMFG VFSEEEVARIHAAGAEAWTTVTTPEEAQAATARGVDVLCAQGPEAGGHRGVWDPSAEPDQ RPLEELVAAVHQVTDLPLIAAGGLRTAEDIATALAWPGVKAVSCGSAFLLSEESGTSEHN RGLLRRGGKTVSTRAFSGRYARGLETAYTRAHPKLPLVYPYLNALLKPRRAQLDADVDYC LVGVDVMKLRGGSVAEILAQLHPNGHE >gi|227860907|gb|ACLH01000013.1| GENE 41 43915 - 44595 672 226 aa, chain + ## HITS:1 COG:Cgl0911 KEGG:ns NR:ns ## COG: Cgl0911 COG0193 # Protein_GI_number: 19552161 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Corynebacterium glutamicum # 33 224 18 204 204 214 62.0 9e-56 MSAIRDFFTRLFGRADEAPNRKAKKAATPGLNPADLSAEWLIVGLGNPGAKYAATRHNVG YMAVDDLLAKSGDMLEPVTGHQLSAAQLELGGTKVVALRSHTYMNLSGDPIAPLAAQLGV AAENIIVIHDELDLPAGKVRIKKGGNENGHNGLKSLSERLGTRDYLRVRIGIGRPPKGGS IPDWVLAPVDASAELDSTIATAAEAARLIVAEGLNKAQQEIHSRSK >gi|227860907|gb|ACLH01000013.1| GENE 42 44637 - 45494 895 285 aa, chain + ## HITS:1 COG:CAC3484 KEGG:ns NR:ns ## COG: CAC3484 COG1028 # Protein_GI_number: 15896721 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Clostridium acetobutylicum # 15 203 5 208 291 91 34.0 2e-18 MSRTSHSLPSDHAPRTVVITGASSGVGAAAARILHQRRPQDSLVLVGRNPEKTQAVAEEI GADFHVADYESLGQVRRLAEELSQYPQIDALGNNAGGMFDGPFATADGFERTWQINVVAP FLLTSLLRDTLRASNATVVQTASLANMLYSAFDPGDPNTFEKFSAERAYGNAKLGDILLT RYLDSHGLTSVAFHPGILNTGFGHNSTSRTSKLYSTAAAQYVLGKADKGGENLAYFLSGT PGIHFNSGEYYNQKRKPGLQRPIAKKLSVARRIFDDLGRQLNVEW >gi|227860907|gb|ACLH01000013.1| GENE 43 45519 - 47150 2254 543 aa, chain + ## HITS:1 COG:Cgl0905 KEGG:ns NR:ns ## COG: Cgl0905 COG4108 # Protein_GI_number: 19552155 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Corynebacterium glutamicum # 2 543 8 549 549 899 80.0 0 MSIASEASRRRTFAVIAHPDAGKSTLTEALALHAHVINEAGAVHGKGNRKSTVSDWMEME KERGISVASSALQFEYAPEGHEGEPYMINLVDTPGHADFSEDTYRVLTAVDAAVMLIDAA KGLEPQTLKLFRVCKARGLPIITVINKWDRVGREPLELVDEIINEIQLQPTPLYWPVGIA GDFRGLAHINDDGEADEYVHFLRTAGGSTIAPEEHYSPDEAAAKEEEAWETAVEEAELLA ADGALHDQELFEQCVTSPLIFASAMLNFGVHQILDTLCAIAPAPRSRDSDPQAIEAATSA IDEVREVTDEFSGVIFKVQAGMDRKHRDNLAFMRVVSGEFERGMQVNHAQSGRSFSTKYA LTVFGRTRDTVDSAYPGDIVGLVNAGSLAPGDTIYTGKKVQFKPMPQFAPESFRILRAKS LGDYKAFRKGLDQLAAEGVVQILRNDTRGDAAPVMAAVGPMQFEVMQARMEVEYNVETIT EPIPYSVARRTDAESAPELGRQRGVEIFTRSDGELIALFGDKWKLAFIEKEHPELTIETL VAD >gi|227860907|gb|ACLH01000013.1| GENE 44 47227 - 48237 1083 336 aa, chain + ## HITS:1 COG:CC1841 KEGG:ns NR:ns ## COG: CC1841 COG1804 # Protein_GI_number: 16126084 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Caulobacter vibrioides # 4 335 5 334 375 323 49.0 2e-88 MSSPLTGLSVLFLGGIGPGPFAAMMLADMGAQVTRVVRPGNPPAVVPHSILYRGQEVLEV DLKDPVDVDKLRQRLTTTDILIEGFRPGVAERLALGPEEVQEINPALVYGRITGWGQSGP LAHTAGHDINYIAVSGALHPIAGSDGAPVPPVNFLGDFGGGSMYLVTGLLAGVLQAKNTG RGCVVDAAIVDGAANLTAMLHAFRAEGQWQDRGTNLLDGGAPFYSVYRTADDQWMAAGAI EPQFYELMVEGLGLTEELGQYEQNDRSAWPAMKEIIARRFAEKTQAEWIDIFRGGDACVT EVVSPEDVLEHPHLTARNTYVSAEGHTEPGPAPRFL >gi|227860907|gb|ACLH01000013.1| GENE 45 48234 - 49733 1401 499 aa, chain - ## HITS:1 COG:FN0815 KEGG:ns NR:ns ## COG: FN0815 COG2610 # Protein_GI_number: 19704150 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Fusobacterium nucleatum # 18 489 3 440 447 317 43.0 5e-86 MVISFIGVVLSLIFLVLMAYRGHSVVVVAPFAALIAVIFSGEPILATYTQIFMPAAGNFV TKYFPLFLFGAIFGFLMTSTGLARYLARGITALFGPKRAMFSTVVATALLTYGGVSAWVV AFTIVPIATALFKESGIPKRLMPGAIALGTITFALAGLPGSPQIHNAIPTSYFGTNVYAA PLFGLISSAIMLAAGTAWLEYRVRTLRAGGETFEPLDADGKVIETPEGIGDSGEETSVEI GGESFDTNSGGRVSTHARTETEPSVQVQGLLGLAPIAVVIVVNFAMVYGVSKVLDTSYLG EEKYGETNLDALLGIWSPTVALACAVFVIVAMFPKRAAESVKEFSDGAKNAILPCLTTAS EVGYGAVIAALAVFSVVKSNMMGISDNALVVSTVSTAVISGITGSSSGGLSITMQTLGDQ LAQLATEQGISLELMHRVTAMASVSFDSMPHNGAVLTMLIVCGMTHRLSYKDVAVVTIVI PLATLALMLGINVLIPGLS >gi|227860907|gb|ACLH01000013.1| GENE 46 49905 - 50417 306 170 aa, chain + ## HITS:1 COG:no KEGG:cauri_0880 NR:ns ## KEGG: cauri_0880 # Name: not_defined # Def: HTH-type regulator, TetR family # Organism: C.aurimucosum # Pathway: not_defined # 1 170 33 202 202 318 100.0 8e-86 MKDIAEEADVSVALIVKHFHNKEGLFEATVDFTASSAALFAGSFSELGRTAVVETLTAPH NAPYSMARTISVASGDYQTLGAIGKRIKSDLLDVLASRIRKESGSQYPSPELRAQSALAL LMGLSFMRRFGDTEFAAFSTEELIEYYAPLLQGILDGDQAFKTLPWNEPR >gi|227860907|gb|ACLH01000013.1| GENE 47 50386 - 51273 1058 295 aa, chain - ## HITS:1 COG:AGl1448 KEGG:ns NR:ns ## COG: AGl1448 COG2084 # Protein_GI_number: 15890846 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 294 11 304 304 268 52.0 7e-72 MTTIAFIGLGNMGGPMAANLAKAGHEVRGFDVVEEARDRAAEQGITIIDTAEEAAQGAEV VFTSLPNGGLVKQVLESVLAAHEDPKTYVDFSTIAVAEARELADTVSKAGSAFLDAPVSG GIAGAAAGTLAFMVGGTAEDFAKVKPLLDIMGKSVTHCGDIGNGQAVKACNNMILAVQQI VLAEALVLGERLGLDHQAFYDVVSNATGNSWSLSVNAPVPDIVPSSPANNDFKPGFAAAL MLKDLKLAMAAAEDTKTDTVLGRVAEEQYASFVDEGHGGLDFSAIITEVRSKEAS >gi|227860907|gb|ACLH01000013.1| GENE 48 51286 - 52800 1884 504 aa, chain - ## HITS:1 COG:Rv0753c KEGG:ns NR:ns ## COG: Rv0753c COG1012 # Protein_GI_number: 15607893 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Mycobacterium tuberculosis H37Rv # 4 504 5 509 510 659 64.0 0 MRTVYHYVNGETFEGTSGNTQPVLNPSTGKEQAAVALANKADVDSVIAESAKAQPGWAAL NPQKRVRIIMEWIRLIHENMDELATQLSLEHGKTFPDAKGDVLRGVDVLEFALGAPHQLK GEYSSEVGTGIDTYSLRQPLGVVAGITPFNFPAMIPLWKAGPALAAGNAFVLKPSERDPS VPVRLAELFIEAGGPAGVLNVVHGGKEAVDAILDSDTIKAVGFVGSTPIAQYIYERCAAT GKRAQCFGGAKNHAIVLPDADIDATADAIVGAAFGSAGERCMALSVVVPVGQDTADRLRD AILAKIPELKVGHCLDPEADYGPLVTAEARDRVHRLIAEGVEAGATLLADGRELDMSDKT FNEDSLADGFYSGPSFFDNVTADMSVYSEEIFGPVLVMVRAETLEEAVSYPNDHVYGNGV AIFTQNGGAARDFCKNVQVGMVGVNVPIPVPIAYHTFGGWKASGFGDLNQHGPDSFRFYT KTKTVTSRWPSDDSAGPQFTMPVM >gi|227860907|gb|ACLH01000013.1| GENE 49 53033 - 55672 1914 879 aa, chain + ## HITS:1 COG:AF1511_2 KEGG:ns NR:ns ## COG: AF1511_2 COG1042 # Protein_GI_number: 11499106 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Archaeoglobus fulgidus # 207 864 1 687 691 213 25.0 1e-54 MDHTEQPATTTPFGPGPTSWEADVILNDGDIATLRPITPADRDAIRAFYDRVSDQSKYLR FFGTHPTLTDDDLDRWLHTDGYDKVTLVMVERGNIVAVAGYSIVEQFLPARVGDVSFLVQ DSHHGKGVANILLEHLAEIGREGKVERFFAEMLTQNRRMVQVFVRAGYSAKPELEDGFIR VDFHIAPNENSRDVMERRELRAEANSIHRLLNPSSVAVVGTLSSQQLASAGFTGSLRNLH SVDELYDLAEPVDLVVIEFQGRGGADVMQAAAAAGAKGVVVISRSQNPNLSREEARDIVL AARDYGLRALGPAALGLINTDESVRLNASPAPMPRAGQVGLFTQSAGVATLALSHALQLG CGLSNFIAAGSFADVTGNDVMQFWSQDENTRICLLSLDSIGNPRKFFRILRRLALDKHVV VFLPSRALKSARHYAVEDLSAASPAALDEIIRYTGAMVVTRRDAMLDIAQLLARQPVPQG RRIAVISNSSGLTAQMEQAAWRFGLRPHALTVVDDPAPAITEQARRALEDPDIDMVLCAV VEVGEFILKDAHSSLSQLASTTTDTPLIASFVGFDVPDFRTAPGPEEPRQLPVFGTYADA IEALATIIDNERRRTLARPNPADEFATSTGLAEARKVVAEILVDSPTGRWATDEECARIL GAYGIDIVPWNPVNTLEEAIAAGHEYGWNVVLKCTSQMVRGRSELPTVVRDIHDEESMAR AWTTITQLTCDLHLGEDPAILIPVVQRMVTAGASLTLRAIEDPVVGPMISAGFSGLPSDL LGDVEWRVPPLRRTDALDMLSCLKASPLLAGYRGTKAAKLHRVEEVMMQLTQLKDDIAAL VDIELSPVIAGVKQTDVVGARMRIAPLGDVRDPLARSLS >gi|227860907|gb|ACLH01000013.1| GENE 50 55669 - 56802 1054 377 aa, chain + ## HITS:1 COG:BS_acuC KEGG:ns NR:ns ## COG: BS_acuC COG0123 # Protein_GI_number: 16080023 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Bacillus subtilis # 17 328 15 332 387 233 39.0 6e-61 MSQSKPLLFASEEMYRYSLGPQHPMGPDRVAAAMSLAQHFSVLEEFDIECPTPLNTSHLQ LVHSPDYIAATRAEVPSKRFGLGTEDNPISHGLSTVAARIAGGTLAAVRAVWEGRAPRAV NLSGGLHHAFADSMSGFCMYNDAAIAIQWLLANGAQRVVYLDLDAHHGDGVEKIFWDDPN VLTISVHESGLYLFPGTGYAHEIGGQGAEGTAVNVALPRGVTDEEWLQVVHAIVPPLLKK FRPDFIISQHGADPHRSDPLADLELTIDAMARAYRSVAVWAQQFAGGRWVALGGGGYRVD AVARAWTQVLAAAAGVELAASSRMPDGWEGSPTLGDEGACAAIGDFDPTKVMAEKPHAAL VQTTRAIFPYWGLPAYG >gi|227860907|gb|ACLH01000013.1| GENE 51 56862 - 57611 207 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 243 1 239 242 84 31 2e-15 MNLHEASAVVTGGASGLGAATAAALAEHGATVTVLDLSVPEEQHSGIDYTAVDVTDAAAV REAVLAAASSAPLRVAVNCAGICPSARIFGRKGPHDPELFSKTINVNLMGTFHVMTAAAE AMAQAEPLDEDGQRGVIINTASVAAFEGQVGQAAYAASKGAVAALSITGARDLASLGIRV NAIAPGVVATPMMEQITPEFREQLEATVPFPARLAKPEEFAALALSIAENPYINGETIRL DGALRMPPR >gi|227860907|gb|ACLH01000013.1| GENE 52 57692 - 58900 1359 402 aa, chain - ## HITS:1 COG:Cgl0288 KEGG:ns NR:ns ## COG: Cgl0288 COG1960 # Protein_GI_number: 19551538 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Corynebacterium glutamicum # 23 402 12 398 398 291 42.0 1e-78 MPPILGPQHPSGKHLEKIKYPHADIFAVADRLVPEEQARLAEIHEFLQTEIRPVVGEYWD REELPFDLLPRMAEMGLGEIELTNTSRLYRGLVYAEVTRADVSLSALVGIHNELVLGLID KLGSPEQKDTWLAGLRQFTKVGCFALTEPDHGSDIAGGLATTAERTAEGWVINGAKRWIG AGTFADFAITFARDTADDEIKAFIVELDRDGVTRSKISRKMGLRIMQNADLNFDNVLIPH ENLIPGAESFANVNDFLCYSRAWVGWQGAGLQLGIFDKAREYAVKREQFGRPIAKFQLVQ EQLSRILGNATASLAMMAQLAEVQEQGKLEMPFAALAKATTTRLARESAAAGRNIGGGNG ILTEYDLSKMMDDAEILFTYEGTYDINSLIVGRAVTGVSAFV >gi|227860907|gb|ACLH01000013.1| GENE 53 58985 - 59689 462 234 aa, chain + ## HITS:1 COG:no KEGG:cauri_0873 NR:ns ## KEGG: cauri_0873 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 49 234 1 186 186 335 100.0 6e-91 MGHFTLNGYDYTYFRTPHTVFYDQFSQHRTSPLQKSPSRPESTQTERHMTQPLTPRQREL FNALLQDFLAEGFESFTIDGATKRYQCSKSTIYALGPSRDAIIRRVLVSFFKEIARRTAV TKAPTYAQALEKYFSSMTIALEPASPEFMRDLASEPAAQEVFSLNTRRATETIHELLSHG VAAGEFTAEYTDFVSRLIQRSMTDIQQGFYSDTLAPAEAYHTLGQLILHGISRR >gi|227860907|gb|ACLH01000013.1| GENE 54 59852 - 61582 1961 576 aa, chain + ## HITS:1 COG:RSp1265 KEGG:ns NR:ns ## COG: RSp1265 COG0365 # Protein_GI_number: 17549484 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 3 573 2 561 562 624 54.0 1e-178 MTTVTEQFQAARDLLVSYQTDYEAACSNFEWPRFEHFNFALDWFDHLATAEDSKDREALV ICETDGSSTRRTFAEMSARSAQLANWLEAQGVQRGDRVMLMLNNQVELWECMLACIKAGF VLNPATAMLGAADLQDRTDRANISWVVANAEDAVKFQDVTGDFTVIQVGDEPEAQSAHPT LRYSDSFTGSEVYTPKQETKADETLLLYFTSGTTSKAKLVEHTHTSYPVGHLTTMYWIGL APGDVHLNVAAPGWAKHAWSNFFAPWIAGATIFLYNYARFDAAALMDKMEEEGVTSFCAP PTVWRMLVQADLGRMKTPPKKLVAAGEPLNPELISTISKAWHTDVRDGFGQTETTLQIAN TPEQKVKPGSMGRPLPGWEVVLKDPATDEIGDTGEICLKIDPRPVGLTVGYFNDPDKNAE VFRDGYYHTGDTAERDEDGYIFYIGRADDVFKASDYRLSPFELESVVIEHPAVAEVAVVP SPDPIRLAVPKAYVALANGYEPNAETAEAILKHCRDGLAPYKRIRRLEFYELPKTVSGKI RRVDLRKRETEIHSADGGETTASTEFADSDFPSLKG >gi|227860907|gb|ACLH01000013.1| GENE 55 61715 - 62215 359 166 aa, chain + ## HITS:1 COG:MT0762 KEGG:ns NR:ns ## COG: MT0762 COG1846 # Protein_GI_number: 15840145 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 2 158 7 164 165 101 38.0 6e-22 MDIIAEARRQWAQRYSAHSARGLATVSSFERAAHILRNGAEEALAPFGVSYSQFEVLAVL MWSRAGSMPMSKISSRLQLPPASLTHTVRKLEKDGLITRVSDPKDKRSTLVMVTDQGIVL ASAAGPALDRYFESIALPAREQDRVIAAANRIRRAAGEDVESPEAQ >gi|227860907|gb|ACLH01000013.1| GENE 56 62349 - 63113 1037 254 aa, chain - ## HITS:1 COG:BMEI1945 KEGG:ns NR:ns ## COG: BMEI1945 COG1024 # Protein_GI_number: 17988228 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Brucella melitensis # 3 253 42 292 293 307 63.0 1e-83 MAILTEKRGRVALITLNRPEALNALNNDTMLEVTHAVQEFDADGEVGAIVITGSDKAFAA GADIKEMSSKTATEMYTADWFAGWDVLTRARTPIIAAVNGYALGGGCELAMMCDFIIAGD KAKFGQPEVNLGVTPGMGGSQRLTRAIGKAKAMEMCLTGRMMAAEEAERSGLVARVVPAD ELLDSALETAQLIASKSFVATSQIKEQVNAVDELSLSQGIQFERRTFHALFSSHDQKEGM AAFVEKRDPDFKHA >gi|227860907|gb|ACLH01000013.1| GENE 57 63182 - 64243 993 353 aa, chain - ## HITS:1 COG:ML2401 KEGG:ns NR:ns ## COG: ML2401 COG1024 # Protein_GI_number: 15828291 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Mycobacterium leprae # 2 327 5 327 345 258 43.0 1e-68 MTNEIISEVRGHAGVLTLNRPKAINALNQTMIDEMTAVLQEWQDDDRVKLVILRGAGERG LCAGGDVAALYHDALEGGTAGAHFWKTEYELNYLISTYSKPYVALMEGIVLGGGIGVSAH ASHRIVSEDSRIGMPEVGIGYSPDAGGSYLLSRAADRLGRHLAYTAIHVGAAEAIDTGFA DYFVPKDKLDALVEQLVESGEPADIEKFSEEVGPGFGEDRAEMVEVYAAETAEETLARLQ ERAAAGGEGHWAAKATKRMSLNSPLGIRVTEESLNRNASMSFAETLTQEFWMSVNMQKHK EFVEGIRAQIVDKDRNPSWEYESIGAVPPDVVASILEHSEGNVEAPTFDTSEN >gi|227860907|gb|ACLH01000013.1| GENE 58 64281 - 65570 798 429 aa, chain - ## HITS:1 COG:ML1158 KEGG:ns NR:ns ## COG: ML1158 COG0183 # Protein_GI_number: 15827585 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Mycobacterium leprae # 41 428 5 393 393 329 51.0 8e-90 MQQYFGIMRAEIDPQGWRSAQSIGTIRVNFVQFGERNMDIVIVGAARTPFGKLLGGLAAL PATELGSHAIAAALAQAQVNPDDVDAVIFGQVLQAGVGQNPTKQAALGAGISPNAHTTTV NKVCLSGLTAIIDASRLLRSGEATVVVAGGMESMSNAPHLLPQSRKGKKFGSVELLDHME HDGLRAADLGISMGSLSEKYAERYPATRQEQDRCAALSHQRALQASEEGLFDTEIAPITV ASRHDEITFSRDEGIREGVTEESLAGLRPAFEPEGGITAGNSSPITDGAAAVVLTTREHA EKKGLPIMAVLRAPGQVAGPDSSLQEQPARALLQALERQGWSAKDLDHIEINEAFAAVVV HSARVLGIHPDDVNPQGGAIALGHPIGASGARLVVHAAHLLAESHARRAGVTLCGGGGQG EALLLEAVN >gi|227860907|gb|ACLH01000013.1| GENE 59 65615 - 67180 1597 521 aa, chain - ## HITS:1 COG:Cgl2162 KEGG:ns NR:ns ## COG: Cgl2162 COG2985 # Protein_GI_number: 19553412 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 8 519 7 535 539 206 29.0 1e-52 MLALFDGNIWLSIFFVALLGTLFGMIPFGPLRFGAAGTLFVGLAIGAFIDLDGTILSSLQ EMGLGLFIYMQGLSAGERFFKGFSEQLKHMITAAIAVVGAAAVALLAGGWMGLSPLLSVG VFSGATTSTASLAVAQQQTGEELPAVGYSLGYPVGVAVAILLVAFLLKQSWPGSKDKDNS AEEVFRSRTIRVTKDITYEELVERFEDQFVIATIRRGNTRTVAGDNPEIRKGDILRVLVT KAKKHELTAALGKRQPQVPFVDKRLVIENVVVSNTDIAGRTVEDLNLFQRFGGRIVHVQR GDEEFLASFDTHLDAGDRVAVIGDQDRMGDIRDYFGDSVQGYSQLNWIAVGGGLFLGYLI ALIVVPLPGGTSFELGFALGPLITGLVLGALHRTRRVPWKVPASINLALQQWGLVIFLAS VGLASSEAFQSTAFSWMGLKSMVLAAIITVVAVAIFAVANRFLGQSETRTAGGISGIFGQ PAVVNYATGMSTDSRIMTGYAATIVVAQIAKIVVIPLMLTF >gi|227860907|gb|ACLH01000013.1| GENE 60 67308 - 68177 766 289 aa, chain - ## HITS:1 COG:Cgl1119 KEGG:ns NR:ns ## COG: Cgl1119 COG4667 # Protein_GI_number: 19552369 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Corynebacterium glutamicum # 6 288 11 295 298 301 50.0 9e-82 MIDAKDTALVIEGGGMRNSYTAACIVKLLTEEVEFGWVGGVSAGSSHTVNFLSRDVSRSE ESFVDFAKNPSFGGLGSLLRGSGYFNAEFIYEKAADQDMPFDWEAFEANPAQMCISAARA DTGESVYWGREDIKTQEDLMVRVRASSTLPLIMPMRVIEGVPYVDGAMGESGGILIEQAE KAGFEKFLFLGSKPRGYVRPEVGRPAALRRVFRKYPAVAEAMIARPPRYNASKDRLLELE KEGRAQLFFPEDMQVASTERSVTKLRANYEAGRAQTYAEWSAWKEFLSS >gi|227860907|gb|ACLH01000013.1| GENE 61 68213 - 68390 149 59 aa, chain + ## HITS:1 COG:no KEGG:cauri_0865 NR:ns ## KEGG: cauri_0865 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 59 1 59 135 102 100.0 7e-21 MGLFSAVKDVIDRLGGSSTVRLASPDPHAVGVSLDHLSVHTASGLIILVTSPAGAQVLS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:07:57 2011 Seq name: gi|227860906|gb|ACLH01000014.1| Corynebacterium aurimucosum ATCC 700975 contig00014, whole genome shotgun sequence Length of sequence - 74321 bp Number of predicted genes - 77, with homology - 73 Number of transcription units - 41, operones - 21 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 228 189 ## cauri_0865 hypothetical protein 2 1 Op 2 . + CDS 235 - 780 549 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 3 2 Tu 1 . - CDS 918 - 1595 664 ## cauri_0863 hypothetical protein 4 3 Op 1 8/0.000 + CDS 1823 - 3019 1548 ## COG0451 Nucleoside-diphosphate-sugar epimerases 5 3 Op 2 . + CDS 3028 - 4191 1339 ## COG0438 Glycosyltransferase 6 3 Op 3 . + CDS 4191 - 5351 916 ## cauri_0860 hypothetical protein - Term 5300 - 5344 3.3 7 4 Tu 1 . - CDS 5359 - 6393 999 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Prom 6397 - 6456 2.5 8 5 Op 1 . + CDS 6500 - 7288 724 ## COG0561 Predicted hydrolases of the HAD superfamily 9 5 Op 2 . + CDS 7416 - 10247 1695 ## COG1835 Predicted acyltransferases + Term 10269 - 10317 13.6 - Term 10263 - 10300 10.1 10 6 Op 1 . - CDS 10320 - 10640 604 ## COG1359 Uncharacterized conserved protein - Term 10660 - 10708 10.2 11 6 Op 2 . - CDS 10740 - 11348 881 ## cauri_0855 putative secreted protein 12 7 Tu 1 . + CDS 11486 - 12400 215 ## PROTEIN SUPPORTED gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 13 8 Tu 1 . - CDS 12423 - 14258 2214 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 14317 - 14376 4.6 14 9 Tu 1 . + CDS 14352 - 15650 1334 ## cauri_0852 putative secreted protein + Term 15671 - 15700 -0.9 15 10 Op 1 6/0.000 - CDS 15696 - 16634 749 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 16 10 Op 2 4/0.182 - CDS 16631 - 17473 837 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 17 10 Op 3 . - CDS 17507 - 18655 1430 ## COG3583 Uncharacterized protein conserved in bacteria 18 11 Tu 1 . + CDS 18677 - 18832 65 ## - Term 18844 - 18879 2.0 19 12 Tu 1 . - CDS 18900 - 19724 766 ## COG0084 Mg-dependent DNase 20 13 Op 1 . + CDS 19749 - 20243 445 ## COG1247 Sortase and related acyltransferases 21 13 Op 2 . + CDS 20252 - 20755 726 ## COG1247 Sortase and related acyltransferases 22 14 Op 1 . - CDS 20937 - 21218 157 ## COG3093 Plasmid maintenance system antidote protein - Prom 21241 - 21300 2.5 23 14 Op 2 . - CDS 21307 - 22500 1070 ## COG2807 Cyanate permease 24 14 Op 3 1/0.273 - CDS 22505 - 24337 2616 ## COG0143 Methionyl-tRNA synthetase - Term 24346 - 24385 9.2 25 14 Op 4 1/0.273 - CDS 24426 - 26267 1903 ## COG1292 Choline-glycine betaine transporter 26 15 Tu 1 . - CDS 26573 - 27433 749 ## COG0313 Predicted methyltransferases 27 16 Tu 1 . + CDS 27460 - 29073 1298 ## COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase 28 17 Op 1 1/0.273 - CDS 29070 - 29759 415 ## COG5660 Predicted integral membrane protein 29 17 Op 2 . - CDS 29746 - 30159 343 ## COG2259 Predicted membrane protein 30 18 Op 1 . + CDS 30214 - 30717 172 ## COG0350 Methylated DNA-protein cysteine methyltransferase 31 18 Op 2 . + CDS 30742 - 31359 312 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Term 31198 - 31229 3.4 32 19 Tu 1 . - CDS 31400 - 32635 1290 ## cauri_0836 hypothetical protein - Prom 32728 - 32787 2.8 33 20 Op 1 3/0.182 - CDS 32804 - 33520 468 ## PROTEIN SUPPORTED gi|15608135|ref|NP_215510.1| ribosomal-protein-alanine acetyltransferase 34 20 Op 2 . - CDS 33539 - 34831 1352 ## COG0303 Molybdopterin biosynthesis enzyme 35 21 Tu 1 . + CDS 34758 - 34892 57 ## 36 22 Tu 1 . - CDS 34920 - 35849 968 ## COG1210 UDP-glucose pyrophosphorylase + Prom 35814 - 35873 3.3 37 23 Op 1 . + CDS 35920 - 36486 312 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 38 23 Op 2 . + CDS 36578 - 37222 424 ## cauri_0831 putative secreted protein 39 23 Op 3 . + CDS 37278 - 37559 123 ## 40 23 Op 4 . + CDS 37596 - 38024 735 ## COG1970 Large-conductance mechanosensitive channel + Term 38120 - 38163 -0.9 - Term 38034 - 38082 11.7 41 24 Op 1 . - CDS 38122 - 38382 118 ## cauri_0829 hypothetical protein 42 24 Op 2 4/0.182 - CDS 38382 - 38975 612 ## COG0521 Molybdopterin biosynthesis enzymes 43 25 Op 1 7/0.000 - CDS 39085 - 40530 1010 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 44 25 Op 2 40/0.000 - CDS 40663 - 42111 1234 ## COG0642 Signal transduction histidine kinase - Term 42146 - 42197 0.1 45 25 Op 3 . - CDS 42270 - 42968 755 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 43125 - 43184 5.0 - Term 43129 - 43178 16.1 46 26 Op 1 . - CDS 43225 - 43398 286 ## PROTEIN SUPPORTED gi|227832652|ref|YP_002834359.1| 50S ribosomal protein L32 47 26 Op 2 . - CDS 43414 - 43683 478 ## PROTEIN SUPPORTED gi|227504194|ref|ZP_03934243.1| 50S ribosomal protein L31 type B - Prom 43793 - 43852 2.9 48 27 Op 1 16/0.000 + CDS 44222 - 44458 402 ## PROTEIN SUPPORTED gi|227832650|ref|YP_002834357.1| 50S ribosomal protein L28 49 27 Op 2 3/0.182 + CDS 44461 - 44625 281 ## PROTEIN SUPPORTED gi|227832649|ref|YP_002834356.1| 50S ribosomal protein L33 50 27 Op 3 3/0.182 + CDS 44629 - 44934 514 ## PROTEIN SUPPORTED gi|227832648|ref|YP_002834355.1| 30S ribosomal protein S14 51 27 Op 4 . + CDS 44950 - 45204 421 ## PROTEIN SUPPORTED gi|227832647|ref|YP_002834354.1| 30S ribosomal protein S18 + Term 45279 - 45335 12.4 + Prom 45257 - 45316 1.6 52 28 Op 1 . + CDS 45445 - 46239 631 ## cauri_0818 hypothetical protein 53 28 Op 2 . + CDS 46328 - 47044 536 ## COG1309 Transcriptional regulator + Term 47146 - 47179 -0.6 - Term 46824 - 46857 -1.0 54 29 Tu 1 . - CDS 47062 - 47742 565 ## cauri_0816 hypothetical protein - Prom 47812 - 47871 2.2 55 30 Tu 1 . - CDS 47877 - 49181 810 ## COG0515 Serine/threonine protein kinase + Prom 48531 - 48590 1.7 56 31 Tu 1 . + CDS 48765 - 50012 783 ## cauri_0814 hypothetical protein + Term 50067 - 50104 0.0 57 32 Op 1 . - CDS 50036 - 50962 832 ## cauri_0813 putative secreted protein 58 32 Op 2 . - CDS 50995 - 51918 832 ## cauri_0812 hypothetical protein + Prom 52076 - 52135 1.6 59 33 Tu 1 . + CDS 52190 - 53023 472 ## cauri_0811 hypothetical protein - Term 53199 - 53238 1.0 60 34 Op 1 10/0.000 - CDS 53249 - 54781 1884 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 61 34 Op 2 . - CDS 54821 - 55426 462 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 62 34 Op 3 . - CDS 55468 - 57180 1164 ## cauri_0808 hypothetical protein 63 35 Tu 1 . + CDS 57574 - 58326 905 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 58361 - 58402 11.1 + Prom 58474 - 58533 1.9 64 36 Op 1 1/0.273 + CDS 58580 - 59122 584 ## COG1695 Predicted transcriptional regulators 65 36 Op 2 . + CDS 59119 - 59835 221 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 66 36 Op 3 . + CDS 59837 - 62533 1752 ## cauri_0804 ABC-type transport system, permease component + Term 62549 - 62592 8.4 67 37 Tu 1 . + CDS 62920 - 63675 851 ## COG0739 Membrane proteins related to metalloendopeptidases 68 38 Tu 1 . - CDS 63680 - 66205 2143 ## COG0210 Superfamily I DNA and RNA helicases 69 39 Op 1 . + CDS 66207 - 66323 59 ## 70 39 Op 2 . + CDS 66307 - 66690 442 ## COG1605 Chorismate mutase 71 39 Op 3 . + CDS 66758 - 67651 653 ## cauri_0800 putative secreted protein + Term 67667 - 67700 0.4 72 40 Tu 1 . + CDS 67753 - 69387 2350 ## COG0166 Glucose-6-phosphate isomerase + Term 69402 - 69444 5.0 73 41 Op 1 . - CDS 69551 - 70618 737 ## cauri_0798 hypothetical protein 74 41 Op 2 1/0.273 - CDS 70671 - 71084 500 ## COG3304 Predicted membrane protein 75 41 Op 3 . - CDS 71095 - 71916 888 ## COG0266 Formamidopyrimidine-DNA glycosylase 76 41 Op 4 . - CDS 71944 - 73212 1606 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 77 41 Op 5 . - CDS 73300 - 74286 719 ## COG1201 Lhr-like helicases Predicted protein(s) >gi|227860906|gb|ACLH01000014.1| GENE 1 1 - 228 189 75 aa, chain + ## HITS:1 COG:no KEGG:cauri_0865 NR:ns ## KEGG: cauri_0865 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 75 61 135 135 129 100.0 3e-29 VARSGEPAQLRGPQTTVHLLATAKEQRPVHDPKKGWAIPLSPAEREILSQLTAEPGDYEV SEALAVSIENIPKES >gi|227860906|gb|ACLH01000014.1| GENE 2 235 - 780 549 181 aa, chain + ## HITS:1 COG:Cgl0121 KEGG:ns NR:ns ## COG: Cgl0121 COG0663 # Protein_GI_number: 19551371 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Corynebacterium glutamicum # 2 178 6 182 186 221 71.0 5e-58 MLILPFQGHTPRIHRSAWIAPNATIIGDVTIGPDSSVFYGSVLRGDVGAIRLGARVNIQD NCVIHVEAAAPCVLEDDVTVGHMAMLHGTHVGAGALVGMKSSLLSGSTVGPGSLIAAGAV VLEGQDIPAGSLAAGVPAKVRRELSPEESAAFIPHAARYVDIAKDQAPLGDALSLDEVLY D >gi|227860906|gb|ACLH01000014.1| GENE 3 918 - 1595 664 225 aa, chain - ## HITS:1 COG:no KEGG:cauri_0863 NR:ns ## KEGG: cauri_0863 # Name: irp5 # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 225 9 233 233 381 99.0 1e-105 MPCTLARMLEAVLNAFADSVNALLIGILVAIGIMLPRGSYRKIAALVIVGDWFGVLTAAA VVMFVFVGIQDKVAAALESPLLGWGLVVIGIGLGLLAWRSKGEPNDMVQKILGPLRTPSA KTVAVGYAMGVIQSLTSVPFFYGLMHLAAGDFSNTVKYGGLFFYASFALSLPTVCGLFIA LVRAKPDSWAGCAFAWARENSATVALWSGYGVAAFLVIMGLVSLL >gi|227860906|gb|ACLH01000014.1| GENE 4 1823 - 3019 1548 398 aa, chain + ## HITS:1 COG:SMc03961 KEGG:ns NR:ns ## COG: SMc03961 COG0451 # Protein_GI_number: 15966498 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Sinorhizobium meliloti # 1 387 1 387 406 547 67.0 1e-155 MKVAILGGDGFCGWPASLYLSDQGHEVIIVDNLSRRAIDEELGAESLTPIASIDERLAAW TEVSGKTIGFRNLDVAQDYDGLLEFLNTERPDAVVHFAEQRAAPYSMKNSRTKRYTVDNN INATHNLLAAIVESEQAIHVAHLGTMGVYGYGTAGMKIPEGYLDVQVDAGENGVVKQQIL YPSNPGSVYHMTKVLDQHLFAYYAKNDELRITDLHQGIIWGTHTVQTQKDERLINRFDYD GDYGTVLNCFLIQAGIGYPLTVHGTGGQTRAFIHIRDMVRCIELALENPPARGESVKIIN QMTETHRVRDLAELLAKISGAEVAYVPNPRKESAENELHVTNDTFLELGLEPTTLSEGLL HEVEEVARKYADRADRSKIPAQSLWTRQQHAGVPSTEA >gi|227860906|gb|ACLH01000014.1| GENE 5 3028 - 4191 1339 387 aa, chain + ## HITS:1 COG:alr2265 KEGG:ns NR:ns ## COG: alr2265 COG0438 # Protein_GI_number: 17229757 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 1 373 1 369 378 313 42.0 4e-85 MRIAIVTEVFLPKIDGVVTRLTRTLDQLAAMGHEVRIFATGKAPATYAGFEVTRIPSLSL WVYPEIKFGLPSWKFFKEIRDFDPDVIHAVNPIWTAALGVFAAQRDAVPLVASFHTNVPE YVDALGIGWTRPLTEATLKYLHNQAAVNLCTSGPMVDKARKMGIRNVQLWPKAVDTQTYH PDRATAQMRERLTDGNPDAPLVTYTGRVSKEKDLERLDHVMQLVRAQLSDARLAIVGDGP ALEELKASFNPAHTVFTGYLSGEELAAAFAVGDVFLFPSATETLGLVALESFASGVPVIG TNAGGIPFVIEEGVTGHLIAPDANDEAWALATLGLLEDPARRETMGAAARREAEKYSWVE STQALLQAYEEAIEHPFRREENEVKEH >gi|227860906|gb|ACLH01000014.1| GENE 6 4191 - 5351 916 386 aa, chain + ## HITS:1 COG:no KEGG:cauri_0860 NR:ns ## KEGG: cauri_0860 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 386 1 386 386 657 100.0 0 MDSAQNLYSAGAFIQAGIDATFASRLGDVRDVEVNFTPADPAPEAQQSAQPDQDQRAVVR FSTGSGSYDFDGLRLATIQDGQLHWATGLTEQAPQPQFHGPQPDSALLRGLARRLVGDRP VLRVPQGEGEALVAVDFTELHPDPRVSILAGLERSGDVEGGVDERLAASELASYLGVAPA AAEGLARFHGTRIAALPHPSGQAVLSARDVLADAHFIATEHNFFLEARFPNLSADLDPGT SRTVVNSDYGSLTVPAHLIATLDASTDTFTWAWADELSSSMSAQAAANLRRFGYDNALPE LIRARVSIPEARSVRLPQLAMPVLGLWTLLPVQLPDGRQGLALTDAPAFHLPAPTPAATQ ATLNVAVPEGVDEHRARAAYQRARGL >gi|227860906|gb|ACLH01000014.1| GENE 7 5359 - 6393 999 344 aa, chain - ## HITS:1 COG:Cgl0895 KEGG:ns NR:ns ## COG: Cgl0895 COG1024 # Protein_GI_number: 19552145 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Corynebacterium glutamicum # 3 338 1 331 339 309 50.0 6e-84 MTMTDPVLVSVRNRTGVLELNRPKALNSLNPEMIDIIRRSLEAWAQDDEIEQVLIHSNSP KAFCAGGDVRHAREGIAEGKLEEVDAFFASEYLTNGDIAEFPKPYISVIDGVVMGGGLGI SLHGSHRVVTEKAFASMPEMNIGYVTDVGVAYAAQRMVGTRGVSSPGLAKFWGLSGYRMY AADMLWTGVATHVVKDAAELIEAAIERGIDPALEDLALPAPQQPAPLEQVAKDLEETFTL PTWEEISAELDKRPNIAGEVRRLMAAACPAAIVAANELYEAEAAVDDIREALLLELKLGM HMYRRPDFSEGVRAVLVDKTQDAAFDPATTEEVDAEEFRAVLNS >gi|227860906|gb|ACLH01000014.1| GENE 8 6500 - 7288 724 262 aa, chain + ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 4 260 17 275 277 198 45.0 1e-50 MLPQLVALDMDGTLLDAHGQLPADFAELQELAAHRGCELVPASGRQLATLKEMFPQGETF IAENGSVVMRGGDIIATFPLSEATVHSAREASAAMDVEHTVVLCAPETAYVARDASDAAR AEISKYYKAVTWVDDLDAVPDSNIIKIAIFCESGSEAHIYEPIVRAVPEDNVAVSGKVWL DVMARGVDKGAALVKLAELANVPITATVAFGDYLNDLEMLRAAGTAVAMENAHPQLKDLA DIIAPPNTDNGVSTVLRQLLRT >gi|227860906|gb|ACLH01000014.1| GENE 9 7416 - 10247 1695 943 aa, chain + ## HITS:1 COG:BS_yrhL KEGG:ns NR:ns ## COG: BS_yrhL COG1835 # Protein_GI_number: 16079768 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Bacillus subtilis # 332 928 9 633 634 317 32.0 5e-86 MVSRLAKGESSTSSPTPDSPSASQKPSSTSTTASKGSAATAKSTPAAKPTSASPFTAPAN TTKPGKPTTPAKPTTSDKNAAPNTQRPSAQRSAARPGRVRPRPAEDFTLDLSPSALPKAS AVKKAKLVKAREEADVASTGRRAPRRPLPRRSAPQPAAAKSPTAAKAQAPAPAPAPAAKK EKAPQPTKNPAQGEEGQKAHRAEAKKAKAPEQAKEPEKKKKKTVTPGPENEISRALARRS QSVGVLSTKQEKQEKRRSAKRPIAKESTAAAVAPAAATAAAADATTASAMATTAAAAPAT APAAAGASTSSTAAPSTTAPATTPRRRRARLRQIPGLDGLRGLAVLAVVIYHFFGDILPG GYLGVDMFFVLSGFLITSLLVREFNATGRISLKDFWLRRFRRILPAALVVLSICTAIVAL IGGDLAVGIRQQFLGTFFFVNNWTQIATSQTYFAPNEVQVFAHYWSLAVEEQFYLIWPLL MFGIFAISRRKPKRLPIAVSLILTIASAVAMALIFTPGEDPTRVYYGTDTHAFGLLIGAI LSLLLTSTDKDVDADSWPAANKGILAGTVGALALVAYLAQLVWMGADREFTYRGGLVLTS VLGAAMIWGVVRETGPLTRIFRTPVMRWLGQRSFSLYLWHWPVVMIIHAMSDAPSWLLGL LCLPLSCLLAEVTYQFVENPFRRAGFRPTWHAYWAARPSMEEIKASFGKALWPAVPVIVV LSLLGVGYALVTSEDKSELERELERMAQSNEQAASSAPAQPTETTKPKEKRAIPTGNEIS AIGDSVMLAASEALNERFPGISIDAAISRHYSAALPVVQGLKDSGQLRSTVFVGLGTNGA TFEGQMDELIDIVGSERTLVLVLPYGERDWMGPARAEIIEAATTHDNVYIADWCGVAQEN PAMLYDDGVHPLPEGAHLYADALYDALEQYADEEKNLTTVCSS >gi|227860906|gb|ACLH01000014.1| GENE 10 10320 - 10640 604 106 aa, chain - ## HITS:1 COG:Cgl0891 KEGG:ns NR:ns ## COG: Cgl0891 COG1359 # Protein_GI_number: 19552141 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 106 4 109 110 106 50.0 1e-23 MILINVQFHVKPEYADTFLEEIDWYTKACQAEPGCIDFKWFRDPEDKQRFLLLESYKDGT DVDHVNTEHFKRSCEELPKYLVETPDIINTHIPGKTEWDKMAEFSV >gi|227860906|gb|ACLH01000014.1| GENE 11 10740 - 11348 881 202 aa, chain - ## HITS:1 COG:no KEGG:cauri_0855 NR:ns ## KEGG: cauri_0855 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 202 1 202 202 328 100.0 1e-88 MYGTVEGMNSFRRVSRLSATAAVAASLAAALSVSAAQAAPATFSSAQPQELNQLSSQAAE QINSFEIELPAQAYDLAKQYNVQLPGFIKKPTPAVANELVGATHAHLLKQGHHEDANAKN IAQEWANQAAAGKVTFQDNAGDGLTHLEEGSGNIYKLTESEAKDRVNWLNRDVPVTKTDG TGFGVAQAFDGTHVYVAEYFFN >gi|227860906|gb|ACLH01000014.1| GENE 12 11486 - 12400 215 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 [alpha proteobacterium BAL199] # 11 299 11 305 312 87 27 2e-16 MLDVLTGFAIIFVVIGVGFFLGHRGVIGHGEARLQFNRTAFWAATPALIFSSVATSDTSA FTSPVVAVIAIASVATMALYGMLSALFFRRSGAETMAGAAAASYYNSVNIGLPIATYVIG DATFVVPALVLQMAVLSPFIIAGLNAQGTSLRSISSSVVSGLTAPVVIAAIAGFIVSAAD WQVPEVIMAPLELLGGASIPIILMSFGASLTGKGLLANDRLPTITATVLKLIVMPAIALA AGLALGLSGNELYAALILSALPTAQNVYNYAATYQSGETVARDTVFLTTFLSLPAMLAIA GFFG >gi|227860906|gb|ACLH01000014.1| GENE 13 12423 - 14258 2214 611 aa, chain - ## HITS:1 COG:Cgl0888 KEGG:ns NR:ns ## COG: Cgl0888 COG0488 # Protein_GI_number: 19552138 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 1 611 1 611 611 900 79.0 0 MANLINLENVTKSFGLKTLLDGVSLGVQTGDRIGIVGVNGGGKTTLLEVLTGIESPDSGR VSHNSDLRMAVVTQRFELEESLTIAQVIIEPLGLETFEWASNAKVRDVLGGLGIVDLGLD TPVGSLSGGERRRVNLAAALVQDLDIVVLDEPTNHLDVEGVQWLASHLLLRKLAIVVVTH DRWFLDTVATTTWEVHDGVVDAYEGGYNDWTFARAERARQADAIEQRRQNLARKELAWLR RGAPARTSKPRYRIEAAEALIADVPAPRDKVELMAFSKQRQGRVVIELEDAKVTTPDGRT LVDHLTWRLAPGERIGLVGVNGSGKTTLLRALAGEVELAAGKRIEGKTVRLGWLRQELDD LDPQRRLLDAVEDVATYVHLGKKELSASQLAERLGFSAKRQRTPVGDLSGGERRRLQLTR VLMAEPNVLLLDEPTNDLDIDTLQELESLLDSWPGTLVVISHDRYLIERIADNTYALFGD GKLTNLPGGIEEYLRRRQEMEAATARGVLDLGEASKDADEKSTEAAPAKRLSSQEERELT KKMNALERKMSKLDDKTAKLNEKMAHAAEKMSSGEGDSGELAKLDSELKAVAAEREELEM EWLELGEKLEG >gi|227860906|gb|ACLH01000014.1| GENE 14 14352 - 15650 1334 432 aa, chain + ## HITS:1 COG:no KEGG:cauri_0852 NR:ns ## KEGG: cauri_0852 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 432 1 432 432 797 100.0 0 MKKERLALCAALSATILTITACSSPDSEEASSPSSAEASNAHAEHGEGHSHDGFEAAEGE TEVAELPPRILLSHKNGLTTLDGETGEVIDSEELKAFLRLSDAGDNRHIMVTKGDSFLTF DTGRITKPHGDHKHYYAAQPQLLSAAIDAPHAGHVVHHDGFTALFSDGDGVARIYKTEDI GKEDANPVNIVETGAAHHGVAVPLKDGSVVTTKGTEDERHTIQHLDSSGKVLAETTECPG VHGEAAAGNGTLFFGCEDGPVVFDGTDFHKIDVSAYAGKDGYQRSGNSAGSEESNIILAD NKTDKDAEFERPTSVTLINTEDHSAKKVELGESYWFRSLARGPLGEALVLTTDGKLNVID PDSGEVTKQIDAISQWKENEEWQQPGPILKAANGYAYVTDANKQELVVLDLLGDQEPQRY KLDFKPVEMAVL >gi|227860906|gb|ACLH01000014.1| GENE 15 15696 - 16634 749 312 aa, chain - ## HITS:1 COG:Cgl0887 KEGG:ns NR:ns ## COG: Cgl0887 COG1947 # Protein_GI_number: 19552137 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Corynebacterium glutamicum # 14 306 5 296 311 206 48.0 5e-53 MSKPVNESPQLWQARAHAKVNLHLGVGEARADGFHELATVFQSLDVHDRVNYRWGEGCAV EVTGNHAKGVPASTENLAWRAVELVAQNLMLPAAGTLTMEKNIPAAGGMAGGSADAAAAL LLANQALSKEFGREPLSTERLYELAAELGSDVPFTLMGGTALGRGRGELLTPMLSRGRYI WAIITNAEGLSTPSVFRKLDELRAAGRGSTPHLDTEAVGQALVGGNPRELAAVMHNDLQP AALSLRPDLRKILETGEAAGALKGIVSGSGPTCAFLCEDEETAQEVVAQVCADNRGTRGL VTRGPATGATLV >gi|227860906|gb|ACLH01000014.1| GENE 16 16631 - 17473 837 280 aa, chain - ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 5 279 8 286 293 355 69.0 4e-98 MTQPHLLGPVEIRELAAELDVTPTKKLGQNFLHDPNTIRRIVAAADLSPEDRVVEVGPGL GSLTLGLLGEVEHVTAVEIDPRLAGKLPDTVAARAADFADRLSVVEKDALTVEAGELGEP TALVANLPYNVAVPVLLHLLEVYPSIRRVLVMVQLEVAERLAAGPGSKVYGIPSVKASFY GPVRQAGTIGKNVFWPAPKIESGLVRIDCTRPFDEALRPRLFALIDAAFAQRRKTLRAAL AGFYGSAAAAEEALRTADIDPRLRGEKLGVEDFVRLAEVS >gi|227860906|gb|ACLH01000014.1| GENE 17 17507 - 18655 1430 382 aa, chain - ## HITS:1 COG:Cgl0885_1 KEGG:ns NR:ns ## COG: Cgl0885_1 COG3583 # Protein_GI_number: 19552135 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 322 6 314 314 237 46.0 3e-62 MSPKKQIKRINNSRSLPLRMATGGVLGTLAVGGVVAVGAQKDITLDVNGETTELATFAGD VNAALEAAGVNVGGEDVVYPALSEQVSDGDSITVRTAKPVAVTIDGVEKQLSSTDLTVSD LLGGLDGIAPGAAITSGSKTVKEDETVTEGMNLEVTSPKIIKLSDGGSVSYASVAAKTVE DVLEARGITVGKDDRVSPALDTPVKAGTAITVDRVEISEEEKMEDFDAPANFVDDPELEE GTEEVREEGTPGSRTVTRKIVKVNGKEESNEIIKEDVRNEAVAAVIARGTKPKSTAPAVA EGSVWDALAQCEATGNWSINTGNGFSGGLQFTPSTWAAFGGTEYAPQAWQASREQQIAVA QKVQAAQGWGAWPACTSKLGLR >gi|227860906|gb|ACLH01000014.1| GENE 18 18677 - 18832 65 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLCARKAASRLWHLSWRALGAPAGNIKAGLTLNNDTVTELNDRNVFTRQDH >gi|227860906|gb|ACLH01000014.1| GENE 19 18900 - 19724 766 274 aa, chain - ## HITS:1 COG:Cgl0884 KEGG:ns NR:ns ## COG: Cgl0884 COG0084 # Protein_GI_number: 19552134 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Corynebacterium glutamicum # 1 274 1 274 277 366 71.0 1e-101 MSKKKPRPTPVPAEGLSQLIDAHTHLASCRDADADLVERARAVGVERIVTVGDGLAEAEK ALAAAQEFDNVYAACAIHPTKAHELDEAARVRLSEMAADPRCVAIGETGLDTYWIHHEPE RTAPLEVQEEALRWHAELAAKVGKTLMIHNREADEELMRVLGECAEVPKVMLHCFSSPLD VAKEALERGYVLSFAGNVTFKRNEEMRQAAALAPAGQLLIETDAPYMTPEPFRGARNEPS LIGHTYRCVAQARGQEVEELAAEVAETFAQVFGV >gi|227860906|gb|ACLH01000014.1| GENE 20 19749 - 20243 445 164 aa, chain + ## HITS:1 COG:BMEI0379 KEGG:ns NR:ns ## COG: BMEI0379 COG1247 # Protein_GI_number: 17986662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Brucella melitensis # 1 161 3 161 164 116 40.0 2e-26 MIIREATDADVPAMTATLNWAIRETHFIFRSEPATVEERTEYLHQLRRDKCPCFAAFEDD GTYLGWALYRPYRDPKVWQGCYETTIYVDPTAHGRGVGTRLLDAVVQHAREAEQVHTLLA LIVADNVASIKLHEKFGFATVGTLKEVSRKAGRWIDLTHLQLMV >gi|227860906|gb|ACLH01000014.1| GENE 21 20252 - 20755 726 167 aa, chain + ## HITS:1 COG:BMEI0379 KEGG:ns NR:ns ## COG: BMEI0379 COG1247 # Protein_GI_number: 17986662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Brucella melitensis # 3 162 5 162 164 99 36.0 2e-21 MHVRPAELADAPAISAIYNAASAAKPATNLVTWQESVEDREKWLAQMEEEGFPVYVAVDD DEIVGWATYFQFVTPAIYYGTAEDSIYIAESARGKGVGSELMDTLMDHAKENDYVETMIT YIVDTNESSIALHQKFGFVETGRMPNIHTKDGVRLGLVHLQRDFDRS >gi|227860906|gb|ACLH01000014.1| GENE 22 20937 - 21218 157 93 aa, chain - ## HITS:1 COG:Cgl1005 KEGG:ns NR:ns ## COG: Cgl1005 COG3093 # Protein_GI_number: 19552255 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Corynebacterium glutamicum # 1 91 9 99 99 133 69.0 9e-32 MHPGEILMEDFLKEMGITQHKLAVSIGVPPRRINEIVHGKRAITADTALRLAKYFGISPQ FWLGLQTHYDLDVAEDKILAELDDIAPLQAASA >gi|227860906|gb|ACLH01000014.1| GENE 23 21307 - 22500 1070 397 aa, chain - ## HITS:1 COG:Cgl0861 KEGG:ns NR:ns ## COG: Cgl0861 COG2807 # Protein_GI_number: 19552111 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Corynebacterium glutamicum # 12 395 10 396 400 276 44.0 4e-74 MGSAFRRSLALILLFVVVCLTALNLRSGIASVAPVLGQIQNFFGISSGQAGLLTALPGLC FAAMGLAAVPIARRAGLSRTLAGGTVALVAGLALRPWVSSFPLFVALTLCVVAGIALANV LLPAWIKQHGSGRTLVALMTTYTTMLGVSSALGPLSAVTQSTWQGALWIWCLPAVAQLVA WIVVLPQAGKDVAHGTIDEAGAQRPMFASPTAVAMLFFFGLQSTMAYVQMGWLPRMLVEK GVSENTASVSLAVIGVFNILGGVVMPWLISRLDRLAPVPVVLALCTCAGWGGVLVAADAA PLAWACLMGIGGMCFPLALALLTARTRSALTTARLSGFVQPGGYVLAGLVPLSVGVVRGA TGNWTAVLIGLMVLSLCMLVAGLRATTRVYIDDELAA >gi|227860906|gb|ACLH01000014.1| GENE 24 22505 - 24337 2616 610 aa, chain - ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 609 1 609 610 1031 80.0 0 MTETVVVNVAWPYANGPRHIGHVAGFGVPSDVFARFQRMRGNDVLMVSGTDEHGTPLLVQ ADKEGVTVRELADRYNRQIVTDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYENGYMIK ETTQGAISPSTGRTLPDRYIEGTCPLCGADGARGDQCDNCGNQLDPVDLINPVSKINGET PKFIDTEHFLLDLPAVKDVLEEWLKTREDWRPNVLKFSLNLLEDMRPRTMTRDIDWGIPI PVEGWEDNGAKKLYVWFDAVIGYLSSSIEWAHRTGNPDAWKDYWQNPQARHYYFQGKDNI TFHSQIWPAELLGYAGKGSKGGELHTYGELNLPTEIVSSEYLTMSGSKFSSSKGVVIYVK DFLAEFGPDALRYFIAVAGPENNDTDFTWDEFVRRINNELANGWGNLVNRTVSMAHKNFG EVPAPAALEQADKDILALAEETFTTAAEFLEQSKFKQAMTAIMHVVGEANAYVAAMEPWK LAKDETQRERLATVLWTALQVVSDCNVMLTPFLPFTAQKVHETLGRDGVWAAQPRIEDVV DDMPVELVGVNLPPENHPYPIITGDYSAQQAAWKRVDITPGTALQKPKPLVAKLDPELGE TGPEWAPVQK >gi|227860906|gb|ACLH01000014.1| GENE 25 24426 - 26267 1903 613 aa, chain - ## HITS:1 COG:Cgl0867 KEGG:ns NR:ns ## COG: Cgl0867 COG1292 # Protein_GI_number: 19552117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Corynebacterium glutamicum # 36 608 3 574 584 730 67.0 0 MTDSTNSDNVKDTEVSSAASQGQSSPAAVEEYRTVDERLEASSATSQLQDMLTNKAFDPA AEPAPVEEQENDEYGPGGIDSPIDWTIVGIAGLLVAAFVAWGLAAPESFATFSSNALSFV VNNFGWAYVLFGTVFVIFVICIAASKFGTIRLGKINEEPEFSTVSWIAMMFAAGMGIGLM FYGASEPLNYFKNGVPGHGENEVGTSMATAMFHWTLHPWAVYAIVGLAIAYSTFRIGRKQ LLSQAFVPLIGQRAADGAVGKIIDILAIFATVFGTACSLGLGAMQIQAGLQASGIIENPT QNVVIGIVLVLTLAFILSAMSGVGKGIQYLSNANMILAALLAIFVFIFGPTVSILNQIPG SIGNYLANFTEMIARTAESDNGTAGEWLSTWTIFYWAWWVSWSPFVGMFLARISRGRSVR EFCVGVLLVPAGVSTVWFAIFGGTAIHMEQKGNSISGESAEQELFNLLQNLPGGFIAGIV AALLLATFFITSADSASTVMGSMSQSGATTAKPWLSAAWGVLTAAVGLTLLLSSEDALSN LQNVTIVAALPFLFILVGLMFAIFKDLSNDVIYREYRESQAFQRKLARERRLHREFQREQ AYKARRRQHSHKH >gi|227860906|gb|ACLH01000014.1| GENE 26 26573 - 27433 749 286 aa, chain - ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 12 285 8 280 282 317 62.0 1e-86 MLGSMSLQLEPLPRGVILAATPLGNPGDASARLMQALGHADVIAAEDTRRVRNLAQALGV EIRGKVVSNFDHNEEERSRTLVAAARTGTVLVVSDAGMPLVSDPGHSIVTAAVEAGVPVT CFPGPSAVPTALALSGLGVGHFLFDAFPPRKPGPRKAWLESLVGEQRAIAFFESPHRLAQ TLGDASEILGADRRAAVCRELTKTYEEIKRGCLGELAEWAQENARGEITVVIEGGDAAPV SLETLVEQVRAEVKRGVRAKDACKQAAAGTAWSNRELYDAYLAARG >gi|227860906|gb|ACLH01000014.1| GENE 27 27460 - 29073 1298 537 aa, chain + ## HITS:1 COG:Cgl0865 KEGG:ns NR:ns ## COG: Cgl0865 COG1928 # Protein_GI_number: 19552115 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Dolichyl-phosphate-mannose--protein O-mannosyl transferase # Organism: Corynebacterium glutamicum # 1 536 1 519 520 624 62.0 1e-178 MSIATPTDRSGRRKRTRLSAARGAHTRPAPPAPRPYTWTRADTISTAIIGVLAFLTRFIG LTAPVSEGTPVFDEKHYVPQAWDMVTSWHNLFLGGIESNPGYGLVVHPPLAKQIIAISEA LFGYTPLGWRAMAALFGVGTVMLTMALARRLSGSWQVGFLAGLLAVCDGVLLVASKFGML DIFQVFFVVAAAWALARDHQQMRERLQAAFVSGTMGDSDFGPRFGFRWWRFTAGVFLGLT LSVKWSGLYYIMFFGLMSVFSDLALRRLYGVRRYIVGTLVRDTPAALASIVAVPVALYTW SWRAWFADETAVYRHAKVDGTIEEGSWLLHLPEPLAGWFYYHSSVLEFHASLTTSGGHSH PWDSKPWAWLVAARPILYYSATDISCGDGGSCRKMLYLFGTPAIWWLVIPAVLWGLWSLL VRRNRAFLIPLVGAAAGFLPWLAVFDRQMYFFYATAFIPFVIVLISLTLGQMIGRGRVLQ WRWLTGLFGSAMPLGTFLTVCYAALVVAMFAYFSPILYGYLIPDSWNSSMMWLPSWS >gi|227860906|gb|ACLH01000014.1| GENE 28 29070 - 29759 415 229 aa, chain - ## HITS:1 COG:Cgl0863 KEGG:ns NR:ns ## COG: Cgl0863 COG5660 # Protein_GI_number: 19552113 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 1 228 1 222 223 133 39.0 2e-31 MLTHEQVQAAISAQLDGEAPQLSPDVIEAHVSGCPECAAFRDKAAALTHSLSLVEPAGVP PQDLSEVILAGVEPEWQRASSTRQASLTLARVSLGVLALVFLVWAVVVVVSASGLTTLSS EGTLAEGADPGRAHLLMEAAALRFGLASGLAFAAWRPASAPGLLPVACTMFAFLCGFTMR DFALGSVAAGQVYILIGTGLATASLGWAWAADRGFLLRDVYRTLSASPR >gi|227860906|gb|ACLH01000014.1| GENE 29 29746 - 30159 343 137 aa, chain - ## HITS:1 COG:Cgl0862 KEGG:ns NR:ns ## COG: Cgl0862 COG2259 # Protein_GI_number: 19552112 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 135 1 135 135 154 69.0 6e-38 MNRPAVRDAALLIFRAVLGVIFVAHGVDKMFFSGMDEITGQFSALGVPQPHTSAYLAAFA EMLGGAALVVGLLTTFVAGALALLMACALYFVHMGNGLFAADGGVEYPLVLIVSLLMIVV FGSGRASVDGVLSRADA >gi|227860906|gb|ACLH01000014.1| GENE 30 30214 - 30717 172 167 aa, chain + ## HITS:1 COG:Cgl2947 KEGG:ns NR:ns ## COG: Cgl2947 COG0350 # Protein_GI_number: 19554197 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Corynebacterium glutamicum # 8 163 7 156 158 119 45.0 2e-27 MHVWTSLDSPLGRLTLVGSARGLSQVYFPDESPNLSGLRRLTDRSDSTWPSVKVLVAATQ QITEYFAGTRRDFELLLDVPPSPETFRDRAQRALRDIPFGEHWTYSRLAAAAGSPQAARA AGSACASNPLPIVVPCHRVVPASGGLGSYRGGVAAKRLLLEHEAGNQ >gi|227860906|gb|ACLH01000014.1| GENE 31 30742 - 31359 312 205 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 21 190 3 175 185 124 38 1e-27 MTSTQMANDTRLVYDATGLGRPAWAMTSPLLKEYYDTEWGMPVHEESALLERLCLEGFQA GLSWELVLRKRDAFRTAFVGFDADLLASFGEEEVERLMNNPGIIRNRLKINAVLANARAT VALREQGGLDEFLWSFLPEETIAPESEEDIPKYTKEALDMSKALKKAGFKFVGPVTCFSL MTAIGMVDAHLLGSHRRGSSGVWSA >gi|227860906|gb|ACLH01000014.1| GENE 32 31400 - 32635 1290 411 aa, chain - ## HITS:1 COG:no KEGG:cauri_0836 NR:ns ## KEGG: cauri_0836 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 411 1 411 411 669 100.0 0 MMTAVPIILVIVLWLFILAPLLLRSQRPMSHTGEAFEETRVLFEGDSGSVPGRRKPRLGK EDIRMSSQAEAQAGAEEADYELVEAEGVSEDSQSGPVETAATDAAEQPDVADTIDGEVVE AEDAEEDFELAAEPEHDANKEHDLDNDIESVESNAAEVFTVPANASVAEDAYGLDDAYTS PVDLMYPGAIDSLGQTPEDFNAEETDGADDAPEPEETTAVDGESIDVAETNSADAETNGS DTELSAEELAFAQRRLGRGGWDPVKEKEASATRYQRRQRTLIGLAVAVVATVCLGIVVGG WTWWLAGIAGVVTTVYLVALRAQVRREQELLRRRVYHLRRARLGVRNAENPAESLPPNLR RPGALILEIDDESPDFDYLPVYSEDDSDGGFDGPHPSPRQRRDDLAARRVG >gi|227860906|gb|ACLH01000014.1| GENE 33 32804 - 33520 468 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15608135|ref|NP_215510.1| ribosomal-protein-alanine acetyltransferase [Mycobacterium tuberculosis H37Rv] # 48 236 13 201 203 184 50 9e-46 MLDPFGTAAGRFSTPASGEVNPDHPGWPEATPAVRLRESRVFPRGATVRLRPLLRRDGES WRRQRIGDRDFLKPVEPTLPTSWDAAHSQSAWWNHLIFLRDSARAGTVVPLVIDVDGQFR GQLTIGNIQHGGVSECWIGYWVHSAVHGAGVATAACALGVDHAFYRVGLHRVTATYLPEN PASGKVLHSNGFRDEGFLRRNLHIDGAWRDHHFLALNREDFASGAVERLRATGRLSGA >gi|227860906|gb|ACLH01000014.1| GENE 34 33539 - 34831 1352 430 aa, chain - ## HITS:1 COG:Cgl0858 KEGG:ns NR:ns ## COG: Cgl0858 COG0303 # Protein_GI_number: 19552108 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Corynebacterium glutamicum # 1 428 1 417 419 545 73.0 1e-155 MRSVDDQMAFILDAAMTPEPVRIAIANALGLKCAEEVQANQPLPGFPQAAIDGYAVRAVD VGGEKALKARTRHDAEDADAPASETEVERSLPVVGEVPAGSRQPLRLQPKQAVRVYTGAP LPTLADAVLPLEWTDRGRKRVTSHRPVRSGDFVRRVGDDIQPGDVAVSSGTILGPAQIGL LAAVGRSKVLAYPRPRVTIVSYGKELVDVDREPGLGQVFDVNSYSLAAAAKEAGADVHRV GIAAGEPRRVREALETYLARSEVLVISGAVGGAGSEEIREVLDELGDVDTSRVAMHPGSV QGFGLLGEERIPTFLLPSNPVSALVIFEVFVRPLIRLSLGKRSGQRRVVRARVLNHMESR PGRRGYIRARLMRDADTSDYLVEGLGGAAGAPAHLLAGLSEANAMIRIPEEVTEIRPGDV VDVLFLTQRS >gi|227860906|gb|ACLH01000014.1| GENE 35 34758 - 34892 57 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAMRTGSGVIAASRMNAIWSSTERMYRLPLLWGMWGLKGWKLLE >gi|227860906|gb|ACLH01000014.1| GENE 36 34920 - 35849 968 309 aa, chain - ## HITS:1 COG:Cgl0857 KEGG:ns NR:ns ## COG: Cgl0857 COG1210 # Protein_GI_number: 19552107 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 1 309 1 310 315 380 67.0 1e-105 MTIAHEDSHTGIATVVVPAAGMGTRFLPATKTVPKELLPVVDTPGIELIAEEAASVGAQR LAVITAPNKQEVMRHFEEFPDLVETLDARGKDEQVAKVKRAAQLIHPISVEQEKPLGLGH AVGLAESVLEDDEEFFAVMLPDDIVLPATVMGEMARVRAALGGSVLCAFEVSREETYNYG VFDVEDTNAPGVKKVVGMVEKPDPADAPSNLVATGRYLLDRKIFDALRRIKPGKGGELQL TDAIELLIKEGHPVHVVVHQGKRHDLGNPGGYIPANVDFGLRDEKYGPALYKAIKKIVED YEEENGLKD >gi|227860906|gb|ACLH01000014.1| GENE 37 35920 - 36486 312 188 aa, chain + ## HITS:1 COG:Cgl0856 KEGG:ns NR:ns ## COG: Cgl0856 COG0212 # Protein_GI_number: 19552106 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Corynebacterium glutamicum # 3 188 2 188 190 120 41.0 2e-27 MTTSPKDALRSSLLNARRERTSEQRADDNAAWCAGVRELLTPAMRIAAYHPLGAEPGGPN FVETVAALCKEVYLPISGKNGELLWTLYVGPEAMRPGALGIAEPVGQRHSSDILAQLDLI LAPAMAVSESGMRLGKGAGYYDRALTPLPTGHPPVVALVHSTEVREVPFEEHDRPVDGIL TERGMRWL >gi|227860906|gb|ACLH01000014.1| GENE 38 36578 - 37222 424 214 aa, chain + ## HITS:1 COG:no KEGG:cauri_0831 NR:ns ## KEGG: cauri_0831 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 214 1 214 214 280 100.0 3e-74 MSFLHVLRTPGHQRSVILRRVTAAVLLVAAAASALASTREQPRVVVMARDVAAGETLALS DVSVARVPSSALPATALGSNPDDAVGRVLVAAASTGEILTSTRLLSSDLIADFGMEDGHL IPLTLAEPEIARNLHHGDTVNIVSTDDGSDDISAPTRGSTIARGARVVSVGTGEDDARTH TLLVALPAEAAEAVAAASLAQPLTVVIVGDRAHS >gi|227860906|gb|ACLH01000014.1| GENE 39 37278 - 37559 123 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRKLCLLYPHPLRRYSFCVIPAPYFGGNACLERSTVVFSTPVIPRFLFSKHSYVSSQDS LSTRPLLVPFLLGAIHLNNTRTLTTRTATQARD >gi|227860906|gb|ACLH01000014.1| GENE 40 37596 - 38024 735 142 aa, chain + ## HITS:1 COG:Cgl0854 KEGG:ns NR:ns ## COG: Cgl0854 COG1970 # Protein_GI_number: 19552104 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Corynebacterium glutamicum # 1 129 1 131 135 144 62.0 7e-35 MLKGFKDFIMRGNVIELAVAVIIGGAFTAIVTSVTDSLIQPLINSFGSPEVAGLGFQITD NPKTFVDFGAVITAIINFLIIAAVVYFGIIAPINAITERAKRRQGVDPEEPAPTTEQLLA EIRDLIAAENGGTTTNKPGSNF >gi|227860906|gb|ACLH01000014.1| GENE 41 38122 - 38382 118 86 aa, chain - ## HITS:1 COG:no KEGG:cauri_0829 NR:ns ## KEGG: cauri_0829 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 101 100.0 1e-20 MTEPTPRSPRPRRRRVQRPSTAENYDRSFDVPSGPASHTPASAAAGSDELRTVNFDGDTQ GPGGDDDATGEAFYRENMPPHFGTTQ >gi|227860906|gb|ACLH01000014.1| GENE 42 38382 - 38975 612 197 aa, chain - ## HITS:1 COG:Cgl0853 KEGG:ns NR:ns ## COG: Cgl0853 COG0521 # Protein_GI_number: 19552103 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Corynebacterium glutamicum # 24 197 23 195 195 192 69.0 3e-49 MADNTDATELLGRDASRELDDVTEPDDAFLIASEQEQSVQAPRRALVVIVTDHPDEAAQD TSRLAGELLAEAEFTVDGAVIVRSKKSKIRQAIETGVVGGVDLVLTIGGTGVGPRDKTPE ATRAVLDQMVPGVAQALRSSGQACGAVDACTSRGISGVSGSTVIVNVASSRAAVRDGMAT LTPLVHHLVDQLQKSSV >gi|227860906|gb|ACLH01000014.1| GENE 43 39085 - 40530 1010 481 aa, chain - ## HITS:1 COG:Cgl0852 KEGG:ns NR:ns ## COG: Cgl0852 COG0265 # Protein_GI_number: 19552102 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Corynebacterium glutamicum # 73 481 43 441 441 336 56.0 7e-92 MDNPMDNPQNSDGRGQAQQRGEASSAGSESNGWNQPRTNSWESGRPAPYGGQQGQGNRSL FGAQPSQAPYGAQAPYGGASYGFGQPNQSSQQLQNPTQPYAGQQGAGVHGVQPGRDQKNK RKVGLGTALAMMLVAAVAAGGVTGAVVGAAGKDKSSTSTVNEVLERQPVANSTGQEPADG SVEEVASKVLPAVVSIYSITRSGGAEGSGSIISPDGYVLTNHHVVAGADQGGRLEVTMND GSRHSATFVASDATTDVGVIKIDDANDLPYLQFGDSDAAAVGQEVVAVGSPLGLNATVTS GIVSAKNRPVRASQEGGESSLIDAIQTDAAVNPGNSGGPLVDMEGNIIGMNSMIASLSRG SSSEGGSIGLGFAIPSNFAKRMADELINNGRVKHPTLGVKVRAQSETQGAEIVDVEPDSP ADKAGLKSGDVVTRVNERLIESSDALIAATRSQEFGATVTLEVKSRDSEDARKVEVTLAS E >gi|227860906|gb|ACLH01000014.1| GENE 44 40663 - 42111 1234 482 aa, chain - ## HITS:1 COG:Cgl0851 KEGG:ns NR:ns ## COG: Cgl0851 COG0642 # Protein_GI_number: 19552101 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 1 425 22 445 455 360 46.0 4e-99 MTFVTYWLVAASMTASVDKQIMQQADVLMQQAQDPAFVENIDQEIATFKLYNPSTRVSIS PPAVAFSYGDALPVGGDFKSDGDTMESSIRTLGGERVLAKYQEGGATVVLAKDLGPTEDI VSAVGSALLIIVAFGVLLSVFAGLVVSKTGMEPIARLKRAADYVTQTNDLRPIAVESNDE MSQLTVSFNRMLSALQHARVQQSQFVADAGHELKTPLTSMRTTIELLMMLNKSGGGFGIS EEDRRDLEEDVMAQMSELSTLIGDLVDLAREDATEKEPEPVELHEVLEHSLNRAKRRRPD VDFRVRFIPWVLDGDPFALGRATLNLMDNAAKWSPATGTVRVSMRQVAEDKVRLRVDDSG PGIAPEERDKVFERFYRSAEARAMPGSGLGLAIVKSVIERHNGDITIKESADGGTRMEVI LPGHPTEGDAMVDGLEEHPNEFQFDSTTAQQATGQPQETSGDHSENHNDRGRIFAERWFN QG >gi|227860906|gb|ACLH01000014.1| GENE 45 42270 - 42968 755 232 aa, chain - ## HITS:1 COG:Cgl0850 KEGG:ns NR:ns ## COG: Cgl0850 COG0745 # Protein_GI_number: 19552100 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 229 1 229 232 319 75.0 2e-87 MKILVVDDEQAVRESLRRSLKFNGYEVILAADGVQAVEMVHSEHPELLILDVMMPNMDGL EVCRTLRSEGWDRPILVLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLVRRAA AESIAKKQPVETQLSFEDLKLDADTREVTRGERQISLTRTEFALLRLLMENPRKVLSRNT ILEEVWGYDFPTSGNALEVYIGYLRKKTEESGEPRLIHTVRGVGYVMREAIA >gi|227860906|gb|ACLH01000014.1| GENE 46 43225 - 43398 286 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832652|ref|YP_002834359.1| 50S ribosomal protein L32 [Corynebacterium aurimucosum ATCC 700975] # 1 57 1 57 57 114 100 1e-24 MATPKFKKSRANTHSRRSQWKADNVALQEVTIDGQTVRIPRRLVKAAKLGLVDVEQF >gi|227860906|gb|ACLH01000014.1| GENE 47 43414 - 43683 478 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227504194|ref|ZP_03934243.1| 50S ribosomal protein L31 type B [Corynebacterium striatum ATCC 6940] # 1 89 1 89 89 188 100 6e-47 MKKDIHPDYHPVVFKDAGTGHSFLTKSTATSDRTVEWEDGNEYPLIVVDVTAESHPFWTG AQRVMDTAGRVEKFNQRFGAMARRKKKNA >gi|227860906|gb|ACLH01000014.1| GENE 48 44222 - 44458 402 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227832650|ref|YP_002834357.1| 50S ribosomal protein L28 [Corynebacterium aurimucosum ATCC 700975] # 1 78 1 78 78 159 100 4e-38 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID RDGIESVVAKIRARGEKI >gi|227860906|gb|ACLH01000014.1| GENE 49 44461 - 44625 281 54 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227832649|ref|YP_002834356.1| 50S ribosomal protein L33 [Corynebacterium aurimucosum ATCC 700975] # 1 54 1 54 54 112 100 4e-24 MARNDIRPIIKLKSTAGTGYTYVTRKNKRNNPDRITLKKFDPIVRKHVEFREER >gi|227860906|gb|ACLH01000014.1| GENE 50 44629 - 44934 514 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227832648|ref|YP_002834355.1| 30S ribosomal protein S14 [Corynebacterium aurimucosum ATCC 700975] # 1 101 1 101 101 202 100 4e-51 MAKKSKIAKNEQRKEIVARYAERRAELKAIIKNPNTPDEERLEAQFELNRQPRDAARVRV RNRDSADGRPRGYLRKFGLSRVRMRGMAHRGELPGVRKSSW >gi|227860906|gb|ACLH01000014.1| GENE 51 44950 - 45204 421 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227832647|ref|YP_002834354.1| 30S ribosomal protein S18 [Corynebacterium aurimucosum ATCC 700975] # 1 84 1 84 84 166 100 3e-40 MAVKRNNHKKFRMEQTRRPKKNPLKAEGIEKVDYKEIKTLRLFISDRGKIRSRRVTGLTP QQQRQVATAVKNAREMALLPFTSR >gi|227860906|gb|ACLH01000014.1| GENE 52 45445 - 46239 631 264 aa, chain + ## HITS:1 COG:no KEGG:cauri_0818 NR:ns ## KEGG: cauri_0818 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 264 1 264 264 462 100.0 1e-129 MPLHESLTDLSELATHCHAPAHARGLLEEAQDLLRNATAHRGDGVELAAWFSRVVTDIVR SPGLASPVRLTGAAARGDLLPSLPITWLGKDDQLEQIITEAGLPCGAVQDLASAHADAGL PLGAGGEEELYAAAVSQRPAPLKLVDGLPDRSADVSIRLSLLAPVSAIARWAAPAPRPTP DRLAIGVERELLTSAEAEGLSLAWGTGIALELGRWYEGVDQHSVVLADLPPLDRTAYGSA CRTVSAAIESIVTRHGSVVSCSED >gi|227860906|gb|ACLH01000014.1| GENE 53 46328 - 47044 536 238 aa, chain + ## HITS:1 COG:Cgl0840 KEGG:ns NR:ns ## COG: Cgl0840 COG1309 # Protein_GI_number: 19552090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 217 1 217 222 247 66.0 1e-65 MAGSVGRPRKNSPRRRGNTAREEILDASSELFTTQGFATTSTHQIADAVGIRQASLYYHF PSKTDIFLTLLNSTIEPSLELADELAASDAAPAQRLWSLVAAESRLLLTSAWNVGRLYQL PVANSPEFGEYHEQRDRLKEHFRTAAAGIVGEDDPRLELPFHIALSVIEMRPNDGNAPFD ASQRVPEQSAMLADAALAVLGATPPENAEATTLELLKNRNDSISSAAAAAADRKKSSR >gi|227860906|gb|ACLH01000014.1| GENE 54 47062 - 47742 565 226 aa, chain - ## HITS:1 COG:no KEGG:cauri_0816 NR:ns ## KEGG: cauri_0816 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 226 16 241 241 451 100.0 1e-125 MSPQQPLPQQNAPQGPRLRIDDLIGGVMVMSPGQEVIVGRAGDFRVGEEDLSLHRQLFQL WYGGQGWMICNVGSHIPLRIELRGVTGFSRIDLGPRSVAAVPPGPSRITFETPECPYELY IDVENSNYSRRTKREQDVDEERTRTRHVPNDEQEELLRLLASYLKKPGSTDADIPSVREI AEELGWTEKKTNHKMDRLVDNLRADGEKAYKPYKTFLAHYAIRHGR >gi|227860906|gb|ACLH01000014.1| GENE 55 47877 - 49181 810 434 aa, chain - ## HITS:1 COG:MT2149 KEGG:ns NR:ns ## COG: MT2149 COG0515 # Protein_GI_number: 15841579 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 15 220 19 211 589 104 37.0 4e-22 MQWLTQQKRYTNVYLLGEGGMGQVFHATDPDLSRELAVKVLLDDVRDEASRARFHNEMKA LTKIGSHPGVVQFYSKESTPRGDDVMVMAFIDGKTLGHAIRERAHQGRGFSVAEVVYYLK PIASALDYMHHELHPGWVHRDIKPANILLRKNPGSLPPAVLSDFGISIEEGQSRLTKIGH IVGTEKYLAPENNGNAYGDDDMSARADDYSLALIAFEMLTLHHLKDTMPRSEWEGQRRIP DLSSDAFAELLAGDTSRVVSEVQTVLNKALNSVPMQRYARAKDFIAALGDVSQTRPAQRA AAPAADAPRIAPTPQPSPRPEQPRNAGSAGQPSQFGQHPQPSQRWPEPSASFGSVERARP TGFVSPSNPIASSGTVSPSAPVTPAMPGSTVQRRSTSQRANHKPPAKDNSNALIITVTVV VIILIFVVTWAIVA >gi|227860906|gb|ACLH01000014.1| GENE 56 48765 - 50012 783 415 aa, chain + ## HITS:1 COG:no KEGG:cauri_0814 NR:ns ## KEGG: cauri_0814 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 194 415 1 222 222 379 100.0 1e-103 MHPPGMQLMVHIIQRRGNWFEVIHNLSHAKSPALVGPLTDSMPQGFAVYEGHNHHVISAR GGLLGIKLNYPWVAADLGECLHFIMETGAGGFITDIIQQHLDGEFTGKVRIRGMKDLPHA AFTQQVHVGVALLLGQPLHEVGISHCPIGPYALGSMMLPCPIAPKWRVLKRGSVQCCKAG YATCCSLPFSKDPMTTPGFGTNHHEHKTPTPVSGQSHQPQSEQRNLVPIICAIAILIALV IAGLVIWYDVRSTSQQTPNTSDTSEQTAPQEEAAAPEETATQEDGEADEAEAPSEQAPGT SVSAGAADVPEGLTAAGWSDYPEARCQQGEDMIFAAHGTDPDSHIVICEKQDSLFYRGVW SSGAAFGPARGEGDSFSATILDPTSGDDTGSVLNIRGTDYDIDGEAGEFEDYWPR >gi|227860906|gb|ACLH01000014.1| GENE 57 50036 - 50962 832 308 aa, chain - ## HITS:1 COG:no KEGG:cauri_0813 NR:ns ## KEGG: cauri_0813 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 308 1 308 308 472 100.0 1e-132 MRRHSPAQLRRRMAVLAALVGIAGASLSACTIGDVSTPETSTPASSPQPTLPDSGAEVSD GPAADSALDKEPTVINATDLQEAVDAIAADNPGTGIAVAGSGTVAAAGNTGPLPAWSTVK VPLAIAAERAGVADPDTVSRAITYSDNAAADSLWEALGGGEQAAQATQAIIGTTEVPATP PRPGFSAFGQTQWSVSEQAEFIAALGCHEGADPILAAMGQPDPAQNYGLRALEGAVMKGG WGPAEEGSYEARQMGLITLGGHTVAVAIYAAAPSGDYGEAQQMLSRVVKQLATAEVDWPD ARCQQGAV >gi|227860906|gb|ACLH01000014.1| GENE 58 50995 - 51918 832 307 aa, chain - ## HITS:1 COG:no KEGG:cauri_0812 NR:ns ## KEGG: cauri_0812 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 307 1 307 307 460 100.0 1e-128 MTDSDRNHGFGAQYPQGNSGQPQPSRKDTHPETADFEAPLTQQRPLPPQSYPQNTGNNQS YAHSGERNYSNPFAASGASGQYGQQQQFQTQHFASQQVPQDGSGQYDQQPAGYPAGYSQE SSGRGSSSNSGKFVLIAVLILAVVLVMAALAYIFFFKHADSHSQAGSPLTTAQLTEQNES AQEDAESAGSEENSEETTEQTTTTSQSHKRPEYPDLPEGAIPANDAARNNEPGGNFNSVY RGTVVTTESFANVVRDEYVKHYVETHEFDATIKAYSPVTEITYTMDCSDNGEFVTCTGGN NAVVLIL >gi|227860906|gb|ACLH01000014.1| GENE 59 52190 - 53023 472 277 aa, chain + ## HITS:1 COG:no KEGG:cauri_0811 NR:ns ## KEGG: cauri_0811 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 277 1 277 277 379 100.0 1e-104 MTFPTGPSGTPPRNSGSSGFGSPAPGFGHPGAPGGANGPHQSGPGGSPSGFGNTPPFGGQ SASPSSQPFGGSAPTPPSPPQPTTYTAPQPPKGTGRFSGAIAALIALLVILAVILGVGAW FIWGRESSGSSHTAASSEPTSTATLPGTPLATSGRIDTDLEADGVVIARTFFPDSYVSRS GSTNIADVQLAESHSQLNAVFGFSDDRENTDVASATVTVNGADGAELASFEVPAEEALEM PINIADHQALRFTFTYKDANGNPADNTGFAVASLHAQ >gi|227860906|gb|ACLH01000014.1| GENE 60 53249 - 54781 1884 510 aa, chain - ## HITS:1 COG:Cgl0838 KEGG:ns NR:ns ## COG: Cgl0838 COG0138 # Protein_GI_number: 19552088 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Corynebacterium glutamicum # 1 510 1 520 520 710 73.0 0 MSEDPKNIKRALISVYDKTGLEDLARALDNAGVEIVSTGSTAKKIADLGIDVTPVEKLTG FPECLEGRVKTLHPRVHAGILADTRKEDHLKQLEELEVEPFQLVVVNLYPFRETVASGAD FDGCVEQIDIGGPSMVRAAAKNHPSVAVVVDPARYGDVADAVANGGFTLEERRGLARDAF LHTADYDAAVSAWFVDQLSDGDVTTPLRYGENSHQSATVTRIGTTGLANAKQFNGKEMSY NNYQDADAAWRAAWDHERPCVAIIKHANPCGIAVSEESIAAAHRAAHACDPMSAFGGVIA VNREVTVEMAEQVKEIFTEVIVAPSYEEGAIEVLKAKKNLRVLQAEHEAPKEEVKYISGG MLTQEPDTYQAEGDNPANWTLAAGEALNESDLAQLEFAWRSVRAVKSNAILLAKDNATVG VGMGQVNRVDSAKLAVERANTLADGANRAEGSFAASDAFFPFADGLEVLLEAGVKAVVQP GGSIRDEEVIEAAKKAGVTMYFTGTRHFFH >gi|227860906|gb|ACLH01000014.1| GENE 61 54821 - 55426 462 201 aa, chain - ## HITS:1 COG:Cgl0837 KEGG:ns NR:ns ## COG: Cgl0837 COG0299 # Protein_GI_number: 19552087 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Corynebacterium glutamicum # 15 190 9 183 197 207 63.0 1e-53 MTTPHQPAATARLNVVVLVSGTGSLLQAILDGQDEHYSVVKVIADVPCQGIERAQAAGIA TEVVEMGADRTDWNKRLVAAVDTAQPDVVVSAGFMKILGKDFLDRFEGRTINTHPALLPA FKGAHGVRDALAYGAKVTGSTVHFVDAGVDTGSIIAQEPVRVLPEDDEASLHERIKVVER ELIVDVLRAMRVEGETLSIQL >gi|227860906|gb|ACLH01000014.1| GENE 62 55468 - 57180 1164 570 aa, chain - ## HITS:1 COG:no KEGG:cauri_0808 NR:ns ## KEGG: cauri_0808 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 570 7 576 576 801 100.0 0 MNKNTSPQSRSSARPRAHVRGRGDGAEHSERGHRRDRRDPAQRIKGIESDKARARRAQAP TTLRGRIRRMLIVVGVPHLVVVLGILVVAIAALLLTSSPSAWLNTIVGEAWMVFNLAPIR AGGIDVGFVPALPALLLAWLVGRRVRAAVKDRVSINDLLVLSACVLVVPLVLTFIAWLML WDAGKVYDVSPPELYRVLPRMLLLHAVALIGGMGPRLWKALAKRSGIPRVFVDAARIGLS YLGYLVAAGLVLVVVLWGFGWSRQAEMLASYPVLNALGTIGLFLVSIVYLPNAAVAAGAV LSGSEMHIGEGTSVSLFSGHVVPLPPLPLAAAVPPSISPWFAVLLVVPAIAAVAAFARRR ALVSFQVVLVATITVAVTALVAIYGVSGTLGVYGYTGPEVWTAVGLSSLWCLVVGCAFAA AQAVTAWRARRATAPVTEPEASAAAEDVEEVTEDSTSAAQEEHEQEQAALDDDIGVDTDT DTDIDADTEDEADVEAKTDTEEADPEVEADAETEAVPEADVSDAEIVETGDVDVDTQAEV EDEAVADEDGDAERAPETEESEEPEGSVKE >gi|227860906|gb|ACLH01000014.1| GENE 63 57574 - 58326 905 250 aa, chain + ## HITS:1 COG:Cgl0835 KEGG:ns NR:ns ## COG: Cgl0835 COG0739 # Protein_GI_number: 19552085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 9 249 7 237 237 233 56.0 3e-61 MRSKTQRSAGRHRKITTSQTTKGRLAVMTVAAGAVSTAGVGGAAAGTIQSAGTGETKAQS IDYTLQADTDPLKDAQAAVEDAAPQILSIAETKPVADLATQLDKAIQAADARAAADEANR APSVARPAEGTFTSGFGPRWGSFHSGIDIANAVGTPILSVMDGTVIDSGPASGYGQWIRI KHDDGSMSVYGHMQTLDVAVGERVHAGQKIAGMGSLGFSTGSHLHFEIHPTGEGAVDPIP WLAERGVNIS >gi|227860906|gb|ACLH01000014.1| GENE 64 58580 - 59122 584 180 aa, chain + ## HITS:1 COG:Cgl0834 KEGG:ns NR:ns ## COG: Cgl0834 COG1695 # Protein_GI_number: 19552084 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 169 1 167 169 131 44.0 7e-31 MSVKHSVLALLSEEPATASHIKTRFAETFDNLWPLNMGQVAQTLSRLERDGLIATDGKLT GPTGRRATSYAITPIGREELSQWWMSTLHNDAIERDELVLKVSLAARRSDVDVIAVLDAQ RFATVRQLRELNRQASELPAERSAQRLAVERQIFDLESLSRWLDRVESLANPTATEEAPR >gi|227860906|gb|ACLH01000014.1| GENE 65 59119 - 59835 221 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 12 213 1 194 305 89 30 4e-17 MTPDSIPTSQHMPFPLELENITCVFGSGARQVTALDSVNLQLKPGELVAVMGPSGSGKST LLNVAGLLQPPTSGPVLLDGADASQLSKAKAAIARRRHLGLVFQHFNLVSSLTVGENVSL PLELDGLSPAQCREAAEEALSEVGLDGTIDRFPEEISGGQAQRVAIARALIGPRKVLLAD EPTGALDTSTGEEIMKVLRARIDAGASGILVTHEPRFAGWADRVVMVRDGRLTGEEVR >gi|227860906|gb|ACLH01000014.1| GENE 66 59837 - 62533 1752 898 aa, chain + ## HITS:1 COG:no KEGG:cauri_0804 NR:ns ## KEGG: cauri_0804 # Name: not_defined # Def: ABC-type transport system, permease component # Organism: C.aurimucosum # Pathway: not_defined # 1 898 1 898 898 1634 100.0 0 MSGINAATRPTRRDLKLHPWRTLAAVMLIALPVALVIGMALFDNSSGRLSAALSSPERTL QISAEHPEISYEDVPGLAADVLPGGLSVSPVTAFSSTSLIHNGKSASSWVDQFDAENPPE PAQEAVDKFNLGPNQAVLSRSTAHKLDASVGDVITVRTSALSGDHQVTVAAIAPENYDFV TSPTLNDALSDPSFQINTSWVIVGDTTLTKEDADRAHEAGLEIWAPELRDTDRPDSESDS FGGILSSILFVLFFFGLYAIAGLLILFLLAPVFTLATGRNTRLYALMSSQGALPRHIMFA VMAYGLLMGLIGATIGAIVGLTVSWVWWTARYPDFAARPPFLAIALAWLVAVAGCVIVSI VPAWLAQRGALSTAIQGAAPDRLLRFRRWMAIGPAFLLLLVLFSFSPWGGYIPTVLALFG VIAVAASAPALVFLCSLLSRRGPLALRLAGRGLTRRSMHALPTSIALVSVAFVASLFGVG IMTDSAKSTAEEKLVMPPTSALIEETTFDQPAQVSTPEERAAIEAIQQTTTARSYPFYAF PSWTTSFSLPEDDTFYELTTEFDYQCEQVDFSKPVERAVFVDNQGRRTDDSEEARQECAH ELMTSFPYNPLIYQSRMVQTDSSQLELWQFDSEEDRRAAAQTLDVGGIVLPHSSHVGNNT RGTATVKTYNRIDSPEPSGTQDADLPVVEALPTAARDVVLISQQAAEKLNMEPFYVGQAL AFDEPPSESEREELRDLTASASQSQYSLSFAVSTPESFRYYLGLGMGIVCLIVLTLIIAN AASSMRQESTVLQSIGAHPSLMAKVAAWQTWMLATVSMFFGVIAGHLGTYFFADSSGFVF STPPYGLRPQDYFTPDWWQFLAVLIVPLLAAALAAAVNRSDKTGPLTARDRSESRSLT >gi|227860906|gb|ACLH01000014.1| GENE 67 62920 - 63675 851 251 aa, chain + ## HITS:1 COG:Cgl2447 KEGG:ns NR:ns ## COG: Cgl2447 COG0739 # Protein_GI_number: 19553697 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 127 251 69 191 191 164 64.0 2e-40 MKRTLSALAAVAVTTATVTAPAFAAEPAASVDVSDGSSQGPTAGDIEVKEDSKADLFKAF SGLIVSTAGALNGASTPEINSTQDGFDIVLDPSSIPGLAEAFAPQGDHSGLTPMRGQDAN GNTVVFPTSGTFTSGFGPRWGSFHNGIDVANPVGTPIYAVMDGEVISSGAAQGFGNWIRI QHDDGTITVYGHMPGDQLLVNVGDRVTAGDQISVIGNEGHSTGPHLHFEVHPGGGAAVDP VDWFSERGILI >gi|227860906|gb|ACLH01000014.1| GENE 68 63680 - 66205 2143 841 aa, chain - ## HITS:1 COG:Cgl0831 KEGG:ns NR:ns ## COG: Cgl0831 COG0210 # Protein_GI_number: 19552081 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 34 841 4 763 763 1123 70.0 0 MNNNSPFRPRSSSAPSTDASAGGFSPVPGPNADTPSGQASDPLLEGLNPQQEEAVTHSGS PLLIVAGAGSGKTAVLTRRIAYLMRERGVAPWQILAITFTNKAAAEMKERVGQLVGPVAE RMWVSTFHSICVRILRNNAQLVPGLNTNFTIYDGDDARRLLTMIAKDMQLDLKKYSARVL ANQISNRKNELISPEQARAEAERTKNPFEITVASVYEEYQRRLRAANSVDFDDLIGEVVR IFNQHPQVVEFYRRRFKHVLIDEYQDTNHAQYALVSALVGRGELPPDAPELCVVGDSDQS IYAFRGATIRNIQEFERDYPQAHTILLEQNYRSTQTILNAANAVIAKNEGRREKNLWTAH GQGEQIVGYVADNEHDEARYIASEIDSLADKGTAYSDIAVMYRTNNASRALEDIFVRSGI PYKVVGGTRFYERREIRDLVAYLRIMDNPDDTVSLRRIINVPKRAIGDKAQAQIALHAEN LGVSFGAALRDAAAGKVAGLGTRAVNAVSKFNEMMEGVRAQIPGMVNEVTGQPDLGELLN ALLDATGYRAELENSNDPQDGARLDNLNELVSVAREFSSEAANEMAFLGADAEEAPELSE GEAAPGSLQAFLEKVSLVADADQIPDHESGVVTLMTLHTAKGLEFPVVFLTGWEDGQFPH MRSLGDPKELSEERRLAYVGITRAREQLYLTRAILRSSWGNPVTNPASRFLAEVPEDLID WRREEPDSSLSSAWGGDDSYQYGRTFGSDSGFFGSRGGGYGSRGAASSPSQRSRKPAPAT SMPKNNHLNLVVGDRVNHAKYGLGTVIEASGTGARATVTVDFGSAGKVRLMLIGGVPMEK L >gi|227860906|gb|ACLH01000014.1| GENE 69 66207 - 66323 59 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSNLLAPPDIAFPHHFLPAKTDVTTHNSPLLERGGTI >gi|227860906|gb|ACLH01000014.1| GENE 70 66307 - 66690 442 127 aa, chain + ## HITS:1 COG:Cgl0830 KEGG:ns NR:ns ## COG: Cgl0830 COG1605 # Protein_GI_number: 19552080 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Corynebacterium glutamicum # 32 127 6 101 101 145 81.0 1e-35 MVAQSEDMSASQSGPPGSGLGPEHQDPNVVDNGLDIRMPSGTDDPLSDAEIQRYREEINR LDRVILDAIKRRTDISRTIGKTRMSSGGTRLVHTREIAILNEFRSELGEEGPAIASALLR LGRGKLG >gi|227860906|gb|ACLH01000014.1| GENE 71 66758 - 67651 653 297 aa, chain + ## HITS:1 COG:no KEGG:cauri_0800 NR:ns ## KEGG: cauri_0800 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 297 1 297 297 568 100.0 1e-160 MRFFSRLAPTLAAATSAFALTACSGSSSHVATITTTTLNLPAIGDSGRAQNSGTNRGSEE VLDSDSLWDNTTEIPQAERPDPRVDLAQPEAAEYFMTAGVLTPGVAIYNADSSGRCSAGH FVGDGERLFILTAGHCGDQGDTFFYKDRAGDNVKIGEMVLEARNTNTDRINSADIALIEV SNPAAQVSTSPALNAPLAGWMPLEDVALTKPTICRAGSTRGVSCGNFIDRHEDQGLFTFG NDSAPGDSGGPVYASIDGKLWAVGVLSFGNDQDPSDVEVGAMEIGNTMKQFDLKLYA >gi|227860906|gb|ACLH01000014.1| GENE 72 67753 - 69387 2350 544 aa, chain + ## HITS:1 COG:Cgl0828 KEGG:ns NR:ns ## COG: Cgl0828 COG0166 # Protein_GI_number: 19552078 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Corynebacterium glutamicum # 2 544 3 540 540 827 76.0 0 MDITAQPQWAALTSLFESKKDLNLRELFANSTSRAADFSFDAAGLHVDLSKNLIDEEVLN ALVDLARAADVEGRRDAMFAGEHLNNTEDRAVLHTALRLPVEKDLSVDGQDVAADVHETL GRMRDFATALRSGTWLGHTGHTIKKVVNIGIGGSDLGPAMAAKALRSYEVAGISAEFVSN VDPADLAATLDGLDAGSTLFIVASKTFTTQETLANAHAARRWLIEQFDGDESAVAKHFVA VSTNAEKVAEFGIDTQNMFGFWNWVGGRYSVDSAIGLSLMCTIGPLDFMRFLEGFHAMDE HFRTAPLEQNVPALMGLLGVWYSNFFGAQTHAVLPYSEDLGRFPAYLQQLTMESNGKSVR RDGTAVSAGTGEIYWGEPGTNGQHAFFQLMHQGTKLIPADFIGFARPKEDFPTADGTGSM HDLLMGNFFAQTKVLAFGKTAEEIAAEGVDDALVPHKVMPGNRPSTTILAEELTPQTLGA LIALYEHIVFTQGIIWDINSFDQWGVELGKQQANDLAPAVSGKEEAASGDVSTDALISWY RNHR >gi|227860906|gb|ACLH01000014.1| GENE 73 69551 - 70618 737 355 aa, chain - ## HITS:1 COG:no KEGG:cauri_0798 NR:ns ## KEGG: cauri_0798 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 355 5 359 359 728 100.0 0 MGDLETYFSYRNSGISLVELAVGGEKRLRALGASPADAAELARLNHIYFGATKFTGKQRQ ARARAAEQRHDLATLSLIESYTKKLKNQLHAWNLRVKLAGTPAHNIPAVAAKRLKELKPK RVPTPGVRMTYRADGPHSLTITDDPMTVTEMRGVLESINQDNLLEAANHVFFTKSHGGTK PAVFTSVVVTLDKLDKIVSGDGDDIVLELTNGGRMTGTEFLNYKFAEIGYVTLIHPTIGP VWLHRMKRLAGFEQRMMASAEHPTCARKGCNKPADYAQVHHLIPWKAGGTTDPPNLTMLC AYHNGINDDDPEKPTGAGYVFRLRGDVDYIPPWGEPITAQVAYQTAQHGLGPPDS >gi|227860906|gb|ACLH01000014.1| GENE 74 70671 - 71084 500 137 aa, chain - ## HITS:1 COG:Cgl0825 KEGG:ns NR:ns ## COG: Cgl0825 COG3304 # Protein_GI_number: 19552075 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 137 1 136 136 170 66.0 6e-43 MKIILNIIWLATGGLVLALGYFLLGILACIPVVTIPAGVASMRMANFALWPFGRSVIQPV KGTGGMSRFSNVVWFLVAGLWLAIGHVTTAAAQAVTIVGIPVALANLKMIPVTCFPFGRK IVDSDEIPFGWESMIKL >gi|227860906|gb|ACLH01000014.1| GENE 75 71095 - 71916 888 273 aa, chain - ## HITS:1 COG:Cgl0824 KEGG:ns NR:ns ## COG: Cgl0824 COG0266 # Protein_GI_number: 19552074 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 1 271 1 253 256 331 61.0 8e-91 MPEGDSVLQLSNRLQFMEGRRVTSSSLRVPRYATVRFDGLVCEEVWPYGKHLFMDFGGEL ILHTHLKMEGTWAIHYAGDRWRKPGHSARVVLQMENTPRDIELVGHWLGLVEVFPSREFE QHMAHLGPDILAPEWLEGGFEEAVHRIESRPERSIGAALLDQRNVAGLGNEYRAEVCFLA GVHPATPVALVDVPQILTISRRLIWANRDSPVRVTTGVKRAGETTYVFGRNRQRCRRCGT LIEKSTLGGVDAGGDEGELERVIWWCPHCQPRR >gi|227860906|gb|ACLH01000014.1| GENE 76 71944 - 73212 1606 422 aa, chain - ## HITS:1 COG:Cgl2855 KEGG:ns NR:ns ## COG: Cgl2855 COG1304 # Protein_GI_number: 19554105 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Corynebacterium glutamicum # 3 402 2 400 420 419 54.0 1e-117 MRLKRQLPNVSELKNLMRFEAPNLDRRAARLAEAADVWDLRKIAKRRTPKAAFDYVDGAA RDEVSYRESRDFFRDVRLMPNVLNGANDISLSTEIAGEPAALPFGIAPTGFTRFMHAEGE DAGSQAARDAGIPFTLSTMGTRSVEEVAASQGNSGRRWFQLYLWKDHSACQELIERAAAN GYDTLVVTVDTPVAGQRLRDTRNGMRIPPRLTAGTVFDAAWRPEWWFNFLTTDPVTFASL TSTTGTLGELVNTMFDPGLNFEDLAWIRKQWTGKLFVKGIVNPEDARKVIDLGADGIVVS SHGGRQLDRVVNTLQALEAVRAEVGPDVEIIYDSGIMSGVDIAIALSLGADFVLIGRAYL YGLMAGGKEGVDRVIELLAEEFKNTLQLLGVKKIEDLSRQHVVTPWEPGALAFGEGRNTP VE >gi|227860906|gb|ACLH01000014.1| GENE 77 73300 - 74286 719 328 aa, chain - ## HITS:1 COG:Cgl0823 KEGG:ns NR:ns ## COG: Cgl0823 COG1201 # Protein_GI_number: 19552073 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Corynebacterium glutamicum # 3 251 1235 1452 1478 263 61.0 3e-70 MGRTSFAQAHNVSSAPTAPDVVGRWSLAVAAATDATSRSIAHGEAWLDRYGVLTRGSVVA EDVLGGFALAYKVLSGFEESGKAMRGYVIEGLGAAQFSTPAVIDRLRGVDDSPDVTGWPS GTREPQTYVLAATDPANPYGAALPWPTTDAGESAARPTRAAGALVVLMDGLPVAHLTRGG KTLTTFFNALPEGIERTEVLAAVLAGLNELVAAGRLNKLVVEKANGRPIFESKLGGELRA LGAALTPKGVRITGSAHTASSGRAGQHGQSGEAARSAEPYRPARRGGRRAVEAMEELSFD DPEDSTESGGPSTTPGSPGGFRPRRRRR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:10:08 2011 Seq name: gi|227860905|gb|ACLH01000015.1| Corynebacterium aurimucosum ATCC 700975 contig00015, whole genome shotgun sequence Length of sequence - 14858 bp Number of predicted genes - 13, with homology - 12 Number of transcription units - 8, operones - 3 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 3946 3611 ## COG1201 Lhr-like helicases 2 2 Op 1 1/0.000 + CDS 3945 - 4739 1095 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 3 2 Op 2 16/0.000 + CDS 4775 - 5581 998 ## COG0207 Thymidylate synthase 4 2 Op 3 1/0.000 + CDS 5581 - 6126 560 ## COG0262 Dihydrofolate reductase 5 2 Op 4 . + CDS 6126 - 6419 443 ## COG0695 Glutaredoxin and related proteins + Term 6570 - 6622 13.2 + TRNA 6491 - 6563 73.7 # Arg CCT 0 0 - Term 6409 - 6451 3.5 6 3 Tu 1 . - CDS 6647 - 6745 102 ## - Prom 6928 - 6987 3.1 + Prom 6890 - 6949 1.9 7 4 Tu 1 . + CDS 7138 - 7638 509 ## cauri_0788 hypothetical protein + Prom 7791 - 7850 1.8 8 5 Op 1 . + CDS 7935 - 8360 228 ## cauri_0787 putative ABC transport system, permease protein 9 5 Op 2 . + CDS 8357 - 9826 226 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 10 6 Op 1 35/0.000 + CDS 9969 - 11582 237 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 11 6 Op 2 . + CDS 11575 - 13347 234 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 12 7 Tu 1 . - CDS 13493 - 13726 262 ## cauri_0783 hypothetical protein 13 8 Tu 1 . - CDS 14672 - 14857 205 ## cauri_0781 hypothetical protein Predicted protein(s) >gi|227860905|gb|ACLH01000015.1| GENE 1 1 - 3946 3611 1315 aa, chain - ## HITS:1 COG:Cgl0823 KEGG:ns NR:ns ## COG: Cgl0823 COG1201 # Protein_GI_number: 19552073 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Corynebacterium glutamicum # 43 1308 1 1226 1478 1646 71.0 0 MSKNVLAKFRPQVAGWFQDVFAAPTPVQEQAWEAISGGANALVVAPTGSGKTLAAFLWAL NSLVEREGQTALPLSNEPSREGAHDGVRVLYISPLKALGVDVENNLRAPLNGIARTAERL GLEVPDITVGVRSGDTPQAGRARQVRKPPDILITTPESAYLMLTSKAAGILKTVDTVIID EIHALAGTKRGVHLALTLERLGLIAGEFQRIGLSATVRPLSAVANFLGSDRPVDIIAPPA KKRWQLDVHVPVEDMSDLPTPEQGSPIGEATVDDPLGITEGPQDAMRVHAQRKEEGGAGD SALPTAKSIWPFIEEELYAEIMEQRSTLVFVNSRRTAERLTSRLNELYAQEHDPESLSPA TRRDPAQLMKQVDVAGKAPAVIARAHHGSVSKDERALTETMLKEGTLKAVVATSSLELGI DMGAVELVVQVESPPSVASGLQRVGRAGHSVGAVSRGSFYPKHRADLVQSALTVARMEEG LIEEMHAPRNPLDVLAQQTVAAVVASASAGTSEGLEADEWYDTVRRAWPYKDLAREVFDS VLDLVSGVYPSTDFAELKPRVVYDRVTGVLTPRPGAQRVAVTNGGTIPDRGMFGVFLVGT GEAGSAPRRVGELDEEMVYETRVGDIFTLGATSWRVEEITRDQVLVTPAPGHTGRLPFWN GDSAGRPYELGKALGAFRREAHADPSVVRDADENARRNIAAYLHEQNEATGLIPDEKTLL LERFTDELGDWRVLLHTPFGRPVNAAWALAVGQRVAERTGMDAQAVAGDDGIVLRLPQGE QDPDASLFLFDADEIADIVTEQVGNSALFASRFRECAARALLLPRRNPGKRAPLWQQRQR AEQLLDVARNYPSFPIILEAVRECVQDVYDLPALTEVMRELAHRRIRIAEVTTEQPSPFA SSLLFNYTGAFMYEGDSPLAEKRAAALALDPALLAKLLGTVELRELLSAEVIAEVHAQLQ RTTVERQARTTEEVADLLRVLGPIPVEEFGAHATVPLSALDSLGARIMRVRTNGREHVAQ ALDAPLLRDGLGIPVPPGIPAQQATITDALDQLVSRWARTRGPFVARDVQEAFGLSAAVA HSTLNGLDSILAGHYRQGVEEQEYCAAEVLKVIRSRSLAAARAATQPVSPAAFGRFLPDW QQVAAVGRRPVLRGVDGVFAVIEQLAGVRLPASAWESLILPARVGDYSPTMLDELTASGE VLIVGAGKAGSNDPWIMLLPADYAAQLAPQVSAEEAGVSMLQTQLLEALQGGGSYLISDI QPQLSGTAEEVREALWGLVEAGLVSPDSFAPIRAHLAAGGPAGRAAHRARAGHRA >gi|227860905|gb|ACLH01000015.1| GENE 2 3945 - 4739 1095 264 aa, chain + ## HITS:1 COG:Cgl0822 KEGG:ns NR:ns ## COG: Cgl0822 COG1218 # Protein_GI_number: 19552072 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Corynebacterium glutamicum # 13 264 1 252 252 383 73.0 1e-106 MPYCIARANLVTMTVEISDSRLTNSLADGCGEILKGVRNGGLLRGLALGDAGDEAAQEWI SRVLEQHRPKDGVLSEEAADDLSRLKKDRVWIIDPLDGTKEFATGRQDWAVHIALVENGT PIHAAVGMPDMGVTFKSSDVRAVTGPLSKKFVVSRNRPPKVADYVAEKMSFETVGVGSAG AKAIHVLLGDYDGYIHAGGQYEWDQAAPVGVALAAGLHCSRLDGSPIKFNNEDTFIPDLL ICRPELAEEILEHAAAYAEANGGY >gi|227860905|gb|ACLH01000015.1| GENE 3 4775 - 5581 998 268 aa, chain + ## HITS:1 COG:Cgl0821 KEGG:ns NR:ns ## COG: Cgl0821 COG0207 # Protein_GI_number: 19552071 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Corynebacterium glutamicum # 5 268 3 266 266 450 78.0 1e-126 MATMIETPYEDLLRRVLEEGAPKGDRTGTGTLSLFGAQLRYNLAESFPLLTTKKVYFHGV IGELLWFLRGDSNVKWLQENKVRIWNEWADEDGELGPVYGVQWRSWPTPDGQHIDQIQVA LDTLKNNPDSRRNLVSAWNVSELDKMALMPCHLLFQLYVADGKLSMQVYQRSADMFLGVP FNLASYAALTHMFAQQAGLEVGELIWTGGDCHIYNDHIEQVKEQLSRQPREYPQLKLHKA ESLFDYDFDDFEVIGYDPHPTIKAQVSV >gi|227860905|gb|ACLH01000015.1| GENE 4 5581 - 6126 560 181 aa, chain + ## HITS:1 COG:Cgl0820 KEGG:ns NR:ns ## COG: Cgl0820 COG0262 # Protein_GI_number: 19552070 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Corynebacterium glutamicum # 1 151 1 139 152 158 52.0 4e-39 MLGAIWAQSLDGVIGDGVVMPWHVPEDLKHFKEVTMGAPVIMGRKTWESLTPKFRPLPGR DNIVLSRREPGEWSAGATVVDNLDAALHATLDDAWIIGGGQLYSSALDRVDTIELTLMGV QVGDAYGADAVLAPSVPEEFSLSADSDWLTSESGHLTIPGQPPSELPMKYRFLTYDRKAA A >gi|227860905|gb|ACLH01000015.1| GENE 5 6126 - 6419 443 97 aa, chain + ## HITS:1 COG:Cgl0819 KEGG:ns NR:ns ## COG: Cgl0819 COG0695 # Protein_GI_number: 19552069 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Corynebacterium glutamicum # 13 95 3 79 79 89 56.0 2e-18 MSTNVATPETTEHVTIFFADWCPFCAKLIKNLDRTETPYELVNVEADSPDTADINAWIES VNDGNRIVPTVLYSDGTHATNPSASEVRAKYAELAGE >gi|227860905|gb|ACLH01000015.1| GENE 6 6647 - 6745 102 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVCIDNHVDVKIAITGAQIAAYTLTEEKIYYN >gi|227860905|gb|ACLH01000015.1| GENE 7 7138 - 7638 509 166 aa, chain + ## HITS:1 COG:no KEGG:cauri_0788 NR:ns ## KEGG: cauri_0788 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 166 46 211 211 296 100.0 2e-79 MIGFAGPQFMFIGWFIAAIANGIVLALYAARTPKMGAFTLVGGINGLAFMLTGHYFWTLL GSIILGFIADLIITKSHLSIAKSFPIAYSVFCVWISMPFIPLILDTDSYYVDIADQMGQE YADAMSDIFQPWTIGVLAICALIVGFIGGKVGVRVSRKHFESAGLL >gi|227860905|gb|ACLH01000015.1| GENE 8 7935 - 8360 228 141 aa, chain + ## HITS:1 COG:no KEGG:cauri_0787 NR:ns ## KEGG: cauri_0787 # Name: not_defined # Def: putative ABC transport system, permease protein # Organism: C.aurimucosum # Pathway: ABC transporters [PATH:car02010] # 1 141 101 241 241 214 100.0 7e-55 MSIGTFGLLTLTPSTLTSALRDLRLPGWATIPPAVFLRVLPIIVAEAKAIRDAMVLRGLQ PGVKSWITQPTQSSAMLIIPLLGAVVRAGDELAASALVRGLGGPARPTTTADLSFKLVDA TALAGLGLVVASVWLPTEVHL >gi|227860905|gb|ACLH01000015.1| GENE 9 8357 - 9826 226 489 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 284 487 2 216 245 91 31 3e-18 MNERSIATSVDAHNVSFTYPLGARPGIQGVSDVSFSVSPGQCLLITGDSGSGKSTVLKLI NGLIPHFNPGELLGTITIIKDDQAFTPAEEPLSRAIEFSASVFQNPRTQFFTESVNAELA FGLENLGVDPKEIESRIQSAVELLGINDLRGRRFKELSGGQLQTVACACALVSPGSLVLL DEPTSNLSMESIDILARVLHRLKELGTTIIIADHRLFFLKDIADQVIYLTQGKITRSFRA QEFYALDEPERKQLGLRSLHHVPLPASVPVPPTLENADPQRSGLELSNICFSYGAHEVLN IDHAFFPSGEVTALIGPNGAGKTTLARIICGLASPKRGGSLRLNSKRVGAAARRRAAYMV MQDVGRQLFAATTEEEVTLGLAKKKRDHIDVNEILHRLDLAGMAQRHPQSLSGGQRQRLA IASAQAEQAAIYIFDEPTSGVGWRQLQSISALLRSLAASGAVVIVITHDHEFIQESVTRI IDMTDINKN >gi|227860905|gb|ACLH01000015.1| GENE 10 9969 - 11582 237 537 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 310 529 121 338 398 95 32 2e-19 MQTTIYFAQFLALISSVLAVAPYVALVALGNALIDGNTDDVASIVKWLLAAFLGQLFFYF LALAITHFADAKLVGINRRRIITAIAKAPLSWFSQTNSGKVRKAVEDDTLTLHTLTAHAP VEKVAAIFTPLALLVYAFILDWRLGLLSIATVPIFLAIQAYSMKDMGTKTAEMDNYLGEV SATAVEFSEGISVVKAFGTVGKAHARYREAAQKFAEFYYEWVRPLLRVSAISESVVAVPV LILINLGVGSLLIAGGYVTVAEVIATTLIALVLPGTIQTVGQMMWSYQLAGNAALRLDEV MTISHVKEGQKSLDANSQDMEVEFHKVSFSYAPDTPVLQDFSAQLNAGTVTALIGPSGSG KSTAATMLARFQDPDSGTITINNVDIRDLTFDSLYRTVAFVLQDPHLLRMSIRENIRLAR PEARDEEIWQAAEAAHIAADIRALPAGLDTVVGEDTSLSGGQQQRISIARAIITNAPILI LDEATAATDPDCEAEIQAALATLVRGKTVLVIAHKPESIQGADQIICLKPMKDNSHV >gi|227860905|gb|ACLH01000015.1| GENE 11 11575 - 13347 234 590 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 260 567 204 511 563 94 29 3e-19 MSNATTPVSSRLRDPLLTRSVKKLQSPVGHKLNKRYACLSLIVGVLDGLAVLTLVPLTKA LDGDTTIAPWMWTLLAIALVAFALRFFATMASYHTALDFIRAAHTTVGDKLATLPLGWFV PANTGGLSRLVSDRFMVAAETIAHIQGTIYRDSAALVTLLVGACFWNPKLGLVLLIIAPL ALVVMQLAAWIREKASNRALGPSKELSQRIVEFANRQPALRAAGQSQVFAPLEQALEIDH KARIRELWVSTLALLLNGIVVQIFIVALIMVSADLAVEGALSPLETIAIIGISLRFTRTL EQLGSSFVGLDAGRIALTETELITDAPSLPEPTTPRPGDGSGSVELRNVTFGYGDKPVLV DIAFHARPGTVTAIVGPSGSGKTTIARLISRFWDVDSGAVMVDGVDIRELGTEQLMSRLS MVFQDVYLFDDSLIANIRVGRPDASDEEVFRAADLSGVTSIANRLGWHTPVGEGGRLLSG GERQRVSVARALLKQAPIVLFDEATSALDAENEANILAAMDELREQSTFIVIAHKLDTIK SADQIVVLDEHGQVSQLGTHSELSDVPGIYRHFWQQRKAARGWKISSGRD >gi|227860905|gb|ACLH01000015.1| GENE 12 13493 - 13726 262 77 aa, chain - ## HITS:1 COG:no KEGG:cauri_0783 NR:ns ## KEGG: cauri_0783 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 77 1 77 77 128 100.0 9e-29 MLIGLGLEAVGVLILVLLMGPDTNGWIIAAPLTLYGLGLGFASAQLTGTMLRDTPVDDSG QASATQTTVRLGQWCRP >gi|227860905|gb|ACLH01000015.1| GENE 13 14672 - 14857 205 61 aa, chain - ## HITS:1 COG:no KEGG:cauri_0781 NR:ns ## KEGG: cauri_0781 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 4 61 1 58 58 94 100.0 1e-18 TVGMQISHGILTVLGKESNEISSIAGLSHIFITVGLTVFLVNLGWAIKEPDAGSANASVN A Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:10:32 2011 Seq name: gi|227860904|gb|ACLH01000016.1| Corynebacterium aurimucosum ATCC 700975 contig00016, whole genome shotgun sequence Length of sequence - 32177 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 23, operones - 6 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 301 - 341 1.7 1 1 Op 1 . - CDS 393 - 749 399 ## cauri_0778 hypothetical protein 2 1 Op 2 . - CDS 761 - 1144 221 ## cauri_0777 hypothetical protein - Term 1275 - 1315 4.1 3 2 Tu 1 . - CDS 1331 - 3607 2925 ## COG1409 Predicted phosphohydrolases + Prom 3569 - 3628 1.6 4 3 Tu 1 . + CDS 3695 - 4123 479 ## cauri_0775 putative redox protein, regulator of disulfide bond formation 5 4 Tu 1 . - CDS 4155 - 5156 781 ## cauri_0774 hypothetical protein - Prom 5272 - 5331 3.8 + Prom 5164 - 5223 2.4 6 5 Tu 1 . + CDS 5282 - 6208 1274 ## cauri_0773 putative secreted protein + Term 6432 - 6464 0.6 7 6 Op 1 . - CDS 6232 - 7254 556 ## cauri_0772 putative lipoprotein 8 6 Op 2 10/0.000 - CDS 7304 - 8950 2405 ## COG4147 Predicted symporter 9 6 Op 3 . - CDS 8954 - 9298 496 ## COG3162 Predicted membrane protein - Prom 9525 - 9584 2.6 10 7 Tu 1 . - CDS 9735 - 10592 962 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 10687 - 10746 3.3 11 8 Tu 1 1/1.000 - CDS 10755 - 11111 513 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 11178 - 11237 2.3 - Term 11209 - 11242 1.1 12 9 Tu 1 . - CDS 11284 - 12576 2003 ## COG0372 Citrate synthase - Prom 12635 - 12694 2.0 + Prom 12448 - 12507 1.6 13 10 Tu 1 . + CDS 12728 - 13858 1673 ## COG1932 Phosphoserine aminotransferase + Term 13924 - 13969 4.3 + Prom 13918 - 13977 3.0 14 11 Op 1 . + CDS 14013 - 15182 1419 ## cauri_0765 hypothetical protein 15 11 Op 2 . + CDS 15196 - 16026 767 ## cauri_0764 hypothetical protein 16 12 Op 1 1/1.000 - CDS 15978 - 16799 900 ## COG0566 rRNA methylases 17 12 Op 2 . - CDS 16844 - 18247 1891 ## COG2252 Permeases - Term 18315 - 18357 8.0 18 13 Tu 1 . - CDS 18374 - 19021 369 ## cauri_0762 hypothetical protein + Prom 18980 - 19039 1.6 19 14 Op 1 . + CDS 19060 - 19917 727 ## COG3823 Glutamine cyclotransferase 20 14 Op 2 . + CDS 19929 - 20516 793 ## cauri_0760 hypothetical protein - Term 20595 - 20630 -0.5 21 15 Tu 1 . - CDS 20664 - 21044 548 ## COG1278 Cold shock proteins - Prom 21206 - 21265 4.2 + Prom 21476 - 21535 1.6 22 16 Tu 1 . + CDS 21573 - 22235 1033 ## cauri_0758 resuscitation-promoting factor RpfA + Term 22289 - 22341 14.7 - Term 22282 - 22323 10.3 23 17 Tu 1 . - CDS 22336 - 23385 1046 ## cauri_0757 hypothetical protein 24 18 Tu 1 . + CDS 23377 - 24006 380 ## cauri_0756 HTH-type transcriptional regulator - Term 24020 - 24072 0.6 25 19 Tu 1 . - CDS 24131 - 24316 312 ## cauri_0755 hypothetical protein + Prom 24276 - 24335 2.7 26 20 Op 1 . + CDS 24410 - 26512 2217 ## cauri_0754 hypothetical protein 27 20 Op 2 . + CDS 26550 - 28187 1892 ## COG1061 DNA or RNA helicases of superfamily II 28 20 Op 3 . + CDS 28192 - 28830 788 ## cauri_0752 hypothetical protein 29 20 Op 4 . + CDS 28831 - 29958 1268 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 30 21 Tu 1 . - CDS 30024 - 30647 406 ## cauri_0750 HTH-type transcriptional regulator - Prom 30719 - 30778 2.2 + Prom 30675 - 30734 5.5 31 22 Tu 1 . + CDS 30830 - 31540 565 ## cauri_0749 hypothetical protein + Term 31597 - 31645 0.1 32 23 Tu 1 . - CDS 31648 - 31998 229 ## COG0471 Di- and tricarboxylate transporters Predicted protein(s) >gi|227860904|gb|ACLH01000016.1| GENE 1 393 - 749 399 118 aa, chain - ## HITS:1 COG:no KEGG:cauri_0778 NR:ns ## KEGG: cauri_0778 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 244 100.0 1e-63 MNNKLTLTDAELIVEPLGLDKLWSLTGSITIPWEHVRGATHDPGMKHEPKGFRAPGLRSG QKLAGTFHADGGRQFWNVSGYENAVVIELKEEHFDRLIVSLDNPAECVARINEKAQAA >gi|227860904|gb|ACLH01000016.1| GENE 2 761 - 1144 221 127 aa, chain - ## HITS:1 COG:no KEGG:cauri_0777 NR:ns ## KEGG: cauri_0777 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 127 4 130 130 239 100.0 3e-62 MKLMGRPRKFNEKEVLSGAITLFGRSGFNAVSVDVVVNQLGLNRSSFYNLYGSKHGLFRA AAETVCAEAEGGRVSDAAKDFVVVALVEVAPVSKDLRELIQRACELCFDSSEALGKHVLA RAQETEH >gi|227860904|gb|ACLH01000016.1| GENE 3 1331 - 3607 2925 758 aa, chain - ## HITS:1 COG:BS_yvnB KEGG:ns NR:ns ## COG: BS_yvnB COG1409 # Protein_GI_number: 16080557 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 55 353 925 1202 1289 145 30.0 3e-34 MSLLALFTVIGRSMTSRRLLGTLVTASVAGTFLVAPASADESGEGLGSRFSIGVLPDTQF YSRYSTPETGNLAQARYGSEPFKVQTEWLVKNQDALNMDFATHLGDVVDQADVEGEWKVA DEAIKVLDDSNLNYSILPGNHDMAQDGSAHPFNDYFSAERAKAANPDTFQERHTAVNSDS EYHIFEAEGQKYLVLALGWRADDTALEWAQGVLDAHPDLPVILTSHEVLNIDGAGEVFYS DDYGQGLWDKFIKKNDQIFLTMGGHHHGAGYRVDKNDAGHDVIGILQDYQMAYQGGNGLL GVLEFDLSGNELEMTALSPWVAQKPAEELTQFDKLILDGTGDSYHVPLNFKERFAGFAPE WTIGDENDPDLGQKARDIAEEGYTPYTIPQDQLPEGPNDFVKADETVFHWRPGQTKNKDG KQLGDGAVATEGAIIPDAFGSDGAGDLVREGGPSNLGERITYTKDHHPLSSDSGSLYWSD PAGKAAMAEFRSKEGAEINKVDTSAGYTFESFVKIPKDFNGSEHGWGSALSRDSSIAELV DGSDDTDPTVMFGISNLRELRWWAEPKEGEGSTVWSHEVPTDEWMHIAVVNKSNSDTVEM FINGAPILRNAKGAEGLLPRDLQWVMGAGFDNRKPQDPWYGWIGETRLTQGVLDSDEWLT ARPAVKDEEPSSSATTSPSESTTEPSTPAKPTNTKEPSASDIGQAFFAGSSRGAKIILPI VAVIAAVGGAAYALIPTINRLFGLNIPQPKLPKIPGLN >gi|227860904|gb|ACLH01000016.1| GENE 4 3695 - 4123 479 142 aa, chain + ## HITS:1 COG:no KEGG:cauri_0775 NR:ns ## KEGG: cauri_0775 # Name: not_defined # Def: putative redox protein, regulator of disulfide bond formation # Organism: C.aurimucosum # Pathway: not_defined # 1 142 1 142 142 259 100.0 3e-68 MSNITKKYDVDVTRVDTGHYRATNAAGASLEFGQGEGLLSPVELLLAAVAGCSAVDVDVV TSRRTEPELFGVHVEGTRVNEDGASRLSDVNVEFSLRFPDTDAGRQAQSMVERLVRISHE KDCTVSRTVENPTNVTFRTTQP >gi|227860904|gb|ACLH01000016.1| GENE 5 4155 - 5156 781 333 aa, chain - ## HITS:1 COG:no KEGG:cauri_0774 NR:ns ## KEGG: cauri_0774 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 333 1 333 333 685 100.0 0 MAEELRMRFIQGDSVFRLNHQQFSDAEVQAVLRGYIENCRRNSQWILDTREEGNTLVVEH LFPVEEFIEANNDRLHIDEAFVESLPLAYPIVFEIRSGYLRVHKPLANEYGALLSDFIRG LWELLLQGQVKYLWDHGFAQCGGVGTIQLNAYGLLEPDEPLIGFYRVDVDMQHEAWVYIT PQGLILVFDDGDVLAFDKVDMRNPSIPSGVFSFSMIKVDVLRAGGNQTVRTALSPKDLGE LDQARADIRTMLSSPHQGQPRRMVDPNPLSWLVVEGEELGYMAQADLERYRRRRSDAGRN PFGDGSDTMQQAMGNPFAELWEENPSRKDNPFA >gi|227860904|gb|ACLH01000016.1| GENE 6 5282 - 6208 1274 308 aa, chain + ## HITS:1 COG:no KEGG:cauri_0773 NR:ns ## KEGG: cauri_0773 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 308 1 308 308 550 100.0 1e-155 MSLSRRSLIKAGALALTAGAIGSHAPAALAVGPALGTIIDFSAGVPSARAIKAAGHLGAI RYVSQRRPGADWMKGKPVTLAETKANAAVGLKTASIYQFGRADTADWLNGAAGAAVHAPQ AIAIHKAAGGPTGRPIYIAIDDNPTRAQYENQIRPYLKAFSTALSAAGYQTGVYGNYNVI DWCVNDRIGQFYWMHDWGSGGKIHPRTTIHQKAKNQATIDGVTCDINTVYANDWGQWTPG QGAVTSPKVKDIPTVPDNIPLPNITLPDPTGRGSSVSSDGITIAGSSISNDQVHGAVDIL NTVRKSMG >gi|227860904|gb|ACLH01000016.1| GENE 7 6232 - 7254 556 340 aa, chain - ## HITS:1 COG:no KEGG:cauri_0772 NR:ns ## KEGG: cauri_0772 # Name: lppW # Def: putative lipoprotein # Organism: C.aurimucosum # Pathway: not_defined # 1 340 1 340 340 529 100.0 1e-149 MFYSQPSHRAASARAGAALLACVLGAASLVACSPAHEEDSTAGGSAQTSARKPGPITHRK GQLQLAAVPDSVGQFLKGDESKAITYYRIETGMHMGSATEHQPRYALSLIKLYIATYVLE RGSFEDKYVALDMIADSSDESAAKLFEKYPRSIDVIAKEYGLESTSAGEDWGHSMTSTYD VVRFIVQLMEDDPTHPVLVAMSHADAVSADGYEQNYGTAKLSDVVGSKWGWSDSKDRHSS VSFGENFVVAASIEGSAQELTSYVRKEITGKNLVKGNNLNKEALANPGAVATRLTTSSAA PTATSTTATSAAATSSEPSSSAPSSQTTPRTSASKTPGAR >gi|227860904|gb|ACLH01000016.1| GENE 8 7304 - 8950 2405 548 aa, chain - ## HITS:1 COG:Cgl0810 KEGG:ns NR:ns ## COG: Cgl0810 COG4147 # Protein_GI_number: 19552060 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Corynebacterium glutamicum # 8 548 11 551 551 680 77.0 0 MQNITLAAAESSAGNPILNIAVFAAFLIVTMYVVLRAGKSTKEASDFYTGGGSFSGRQNG LAISGDYLSAASFLGIVGAVALNGYDGFLYSVGFFVAWLVALMLVAEPMRNVGRFTMADV LSFRLKQRPVRVAAAISTLFVSLFYLIAQMAGAGSLVAVLLDIHEFKWQAVVVGIVGILM IVYVLVGGMKGTTYVQMIKAVLLVTGVVIMCILTFVMLKGGFSSLFTQAIDMHANSAAIK EGGYEASQIMEPGLKYGKNLTTKLDFISLGIALVLGVGGLPHVLMRFYTVPTATEARRSV TWAIVIIGAFYLMTLVLGYGAAALVGPDRILAAPGGANSAAPLLALEIGGSIFMAVISAV AFATVLAVVAGLAITASASIAHDIYHSVIRNGESTEAEQVRVSQITVVVLGIVSIILGIL AMTQNVAFLVSLAFAVAASANLPTILYSLYWRRFNTAGAVASMYTGVISCLVLIFLSPAV SGTPTSMFPNADWSIFPLSSPGLVTIPLAFFAGWIVSIMTPPDNLEELSAEMEVRSLTGV GVEAPVDH >gi|227860904|gb|ACLH01000016.1| GENE 9 8954 - 9298 496 114 aa, chain - ## HITS:1 COG:Cgl0809 KEGG:ns NR:ns ## COG: Cgl0809 COG3162 # Protein_GI_number: 19552059 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 22 114 1 93 93 109 61.0 1e-24 MTDAPASINSRREPSPQEFVEMRDSSQFSKLRGTYRKFTFPMTVAFFVWYVLYVLAAVFA PDFMAIEFGGGWNVGLIFGLAQFLTTFIITYIYVNYANKNIEPQAAAIRQELEG >gi|227860904|gb|ACLH01000016.1| GENE 10 9735 - 10592 962 285 aa, chain - ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 4 282 20 292 294 240 43.0 2e-63 MEDMSVPQTTFNDDREMPLLGLGTYKMHGEELVRSVREAIDLGYRHFDTATLYENEEELG QALNAAMKAGDVTRDELFITSKVWHDHHGKDKVGQAFRESLDKLQLDYLDLYLIHWPWPQ GRLYVETFEEIARMQGMGQIASIGVANFYEETLQTLIDETGIVPVLNQVELHPGFTQPEL RQFHDSHGIVTEAWSPLARGIILNNPEVMAVAEKHDITAGQAVLAYLLSKGISVIPKSSR RERLEENFAAAEVELTAEDFAALDALDGKEGFGRMFKDPREFPGD >gi|227860904|gb|ACLH01000016.1| GENE 11 10755 - 11111 513 118 aa, chain - ## HITS:1 COG:Cgl0807 KEGG:ns NR:ns ## COG: Cgl0807 COG0545 # Protein_GI_number: 19552057 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Corynebacterium glutamicum # 1 118 1 118 118 167 76.0 3e-42 MEKPVIEPATEPAPQDLVIEDIVVGDGAEAQPGGFVEVHYVGVDYETNQEFDSSWGRGQS IEFPLTGLIAGWQEGIPGMKVGGRRKLVIPPEKAYGPAGGAHPLSGRTLTFVIDLIRA >gi|227860904|gb|ACLH01000016.1| GENE 12 11284 - 12576 2003 430 aa, chain - ## HITS:1 COG:Cgl0806 KEGG:ns NR:ns ## COG: Cgl0806 COG0372 # Protein_GI_number: 19552056 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Corynebacterium glutamicum # 1 430 7 437 437 736 81.0 0 MASEKNKVVLQYPGGEYEMDIKQSTEGDSGFDIGKLRNETGLVTFDPGYAATGSTESKIT FINGEEGILRHRGYDIADLAENATFNEVSYLLIKGHLPTEDELSKFNTEIRHHTLLDEDF KAAFNIFPRDAHPMAVLASSLNILSAYYQDQLNPLDEEQLDKATVRLLAKVPMLAAYAYR ASQGKPYMYPDNKLNARENFLRMMFGYPTEEYEVDPVVAKALDKLLILHADHEQNCSTST VRMIGSAQANLFVAIAGGINALSGPLHGGANQAVLEMLEDIQNNHGGDATDFMNRVKNKE KGVRLMGFGHRVYKNYDPRAAIVKDTAHEIIDHLGGDPMLDLAMKLEEIALNDDYFVSRK LYPNVDFYTGLIYRAMGFPTDFFTVLFAIGRLPGWIAQYREQLELNTKINRPRQIYTGET LRKVTPRSER >gi|227860904|gb|ACLH01000016.1| GENE 13 12728 - 13858 1673 376 aa, chain + ## HITS:1 COG:Cgl0805 KEGG:ns NR:ns ## COG: Cgl0805 COG1932 # Protein_GI_number: 19552055 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Corynebacterium glutamicum # 8 374 7 370 376 565 77.0 1e-161 MSNSELVLPADILPSDGRFGCGPSKVRPAQIEAITAGADTIIGTSHRKPAVKNLVGSIRE GLSELFSLPEGYEIVLSLGGATAFWDAATFGLIEKKSAHLSFGEFSSKFAKSAAAAPWLD APLVTEAEVGTAPDPKAADAEGADIIAWAHNETSTGAMVPVTRPHPDNAEQLVVIDATSG AGGLPVDMPDADVYYFSPQKCFASDGGLWLAAMSPAALERIEKINSSDRFIPAFLNLQTA VDNSRKNQTYNTPAVATLLMLENQVQWMNANGGLDGMVKRTTENSSILYNWAEARPEATP FVAEPSERSLVVGTIDFEDSVDAAAVAATLRANGILDVEPYRKLGRNQLRVGLFPAIDSA DVTKLIKAIDYVLDNR >gi|227860904|gb|ACLH01000016.1| GENE 14 14013 - 15182 1419 389 aa, chain + ## HITS:1 COG:no KEGG:cauri_0765 NR:ns ## KEGG: cauri_0765 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 389 1 389 389 578 100.0 1e-163 MREIFLAPSDSTDTSLVLRAEDGEEFFLEVTDELRELFAPADSAESESETAAEGSAAQEE DDATTATEDSSTASAQAERSTGLHTVMPASGGSPSSPQSQPTPQAQEIRLRPNEIQSRIR AGATAAEIAEELDVPESRIEPFAHPVLLERARIADVAKQAHPIREDGPAKLTLWEILATA FAARGHSLSEATWDAYRHQGEPWILRITWKTGLSANEAEWTFKQTMSSPATVEARNSVAA DLTDPDFVQPVRSLTSVGRGERYDEAIDGRDYAEDLEVNEDARAGAPGVTELSSYAGVGE DTDGYAEPSVLPSPHGGEHPADTANAEEASAATEESAQQSEEKETGVDEDFLQNPDPEPK PTKRRRKAVTPHWEDVLLGVRSSTKRPRN >gi|227860904|gb|ACLH01000016.1| GENE 15 15196 - 16026 767 276 aa, chain + ## HITS:1 COG:no KEGG:cauri_0764 NR:ns ## KEGG: cauri_0764 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 276 1 276 276 536 100.0 1e-151 MDTQSAVLTLWYVTAADPAEVLRGEPKADRGFGRKFLAQLNPSLPVTPIGQFPLNRSAEP GASEFYVGGYPGVTVVQTIIHDDQLILSQLSRTLREAVPATEIYAFASDPETGYAGFAHW TGSRLRRSLCGTRFNLYEDHGLPETFEAPFWAGEMDEPVGGISLPFEPLTITEAAQEFWL GIEVGEDGPDVDVVGYATDGRPEPKVDTPSPRRSVGEVATTSVAKLGLNDYDDYEEHDLE PESTGEEILRTAKHLGGLVRRYAVSTSRSLWERWRS >gi|227860904|gb|ACLH01000016.1| GENE 16 15978 - 16799 900 273 aa, chain - ## HITS:1 COG:Cgl0802 KEGG:ns NR:ns ## COG: Cgl0802 COG0566 # Protein_GI_number: 19552052 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 2 266 4 276 276 365 69.0 1e-101 MRFVIDDPTDPRLDDIRDLKHADKSGEGFVFGEGPLCVERLLASRFPVRCIIGFEGKLDT FLANHDVGDIPVYQVTRATLGEVTGFDMHRGLVAAADRAEAWTVDEVIEGARTLAIMEGV GDHENIGSLFRNAAGMDVDGILLGSGAADPLYRRSVRVSMGHVLRLPWARFDGGFTTWQR GLEQLREKGFRLVSLTPHPDAVHIADALEGADKVALLVGAEGPGLTEHAMRATNVRARIP MAEGTDSLNVATSAAIAFYERQRSQRLREVDTA >gi|227860904|gb|ACLH01000016.1| GENE 17 16844 - 18247 1891 467 aa, chain - ## HITS:1 COG:Cgl0801 KEGG:ns NR:ns ## COG: Cgl0801 COG2252 # Protein_GI_number: 19552051 # Func_class: R General function prediction only # Function: Permeases # Organism: Corynebacterium glutamicum # 26 462 1 448 453 479 70.0 1e-135 MNAAIDRYFKISERGSTVGTEVRAGVVSFFAMAYIILLNPLILGTSADSAGTTLGIPQVA AATALVAGVMTIAFGMIARYPFAMAAGLGMNTFVAVTMVSLNGLEWREAMGLVIIEGLII VLLAISGFRQAVFDAIPASMKAAMGVGIGMFIALIGFVDGHFVTRVPDAAMTTVPVSLGV NGSIATWPAFVFVVGLILSAFFVIRRVRGGLFIGIVITTIIAMIIQALTDSEDWGMATPE VPSSLGGLPDLSIVGQVDPISAFTKLGVVSTVLLIFTLLLTNFFDAMGTMNGLGKQANLV DEKGNLPNMKTALVVEGFGAVAGGAGSVSSNTVFADSAAGIGDGARTGLANVVTGVIFLL AMFLTPLYEIVPIEAAAPVLVVVGVMMAAQLKDIEWNRMEEAIPAFLTIVVMPFTYSIAN GIGVGFIAYALMATFAGKAKKVHWVMWLVAALFVVYFAMEPISSLLA >gi|227860904|gb|ACLH01000016.1| GENE 18 18374 - 19021 369 215 aa, chain - ## HITS:1 COG:no KEGG:cauri_0762 NR:ns ## KEGG: cauri_0762 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 215 11 225 225 428 99.0 1e-118 MTRKKKMHSPLLDSTAVNLARRAVEEVGEGDVGKHRGVAGVGRNVATHRFDAHVPGYPGW EWHAVVACAEGSRIPTVNEVALVPGGQALQAPEWVPYSERLRPGDLGPGDLMPPAPDDDR LDEGKLSQVGLTEAKERWRKKYGPNSDMASQAQLQCKTCAFYLELLPNYGVCANEYSADG KVVHATYGCGAHSGTTVREEGSEQERPFDDERPIY >gi|227860904|gb|ACLH01000016.1| GENE 19 19060 - 19917 727 285 aa, chain + ## HITS:1 COG:Cgl0799 KEGG:ns NR:ns ## COG: Cgl0799 COG3823 # Protein_GI_number: 19552049 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutamine cyclotransferase # Organism: Corynebacterium glutamicum # 13 284 1 254 258 229 47.0 5e-60 MTVMPLLHTDRALRALAAVLSAAALLAPLTSCSSQAAHEDVSSSTAGGTSPSASAPEHLG VTVLDTAPLPADTFTQGLEVDPDGNLLIGTGLNGKSRLLRFNPGTETPLEETTLEHTYFG EGITQTDAGIWQLTWKSGTAFLRDSTTFEELRRVHYDGEGWGLCNAGSELIMSDGSAELR HLDPQTFEELGPRTEVTLDGSPVDNLNELECVDGAVYANVWMSEDILRIDPASGVVTAVI DTANLNHVPSADPNAVLNGIARIPGTDEFWITGKLWDELYRVRFE >gi|227860904|gb|ACLH01000016.1| GENE 20 19929 - 20516 793 195 aa, chain + ## HITS:1 COG:no KEGG:cauri_0760 NR:ns ## KEGG: cauri_0760 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 195 1 195 195 317 100.0 2e-85 MATVKQARKKSLLQFLALIIAVAVIVVAVVLFQKWWNDRPGPEPADVTITATVGEDTLEV SPYIVCEPGTDCEEGEVPNLTVGPDDTLKLEIPEAIYNHEWSVLSIYDDPAANDSTAHGA NETTSLEIPGSVPPIEASTGERPQLKVVEISTLMIGRDANGEETPMHTVWSLSTMTDEEL KESKATGDAEAPAEK >gi|227860904|gb|ACLH01000016.1| GENE 21 20664 - 21044 548 126 aa, chain - ## HITS:1 COG:Cgl0797 KEGG:ns NR:ns ## COG: Cgl0797 COG1278 # Protein_GI_number: 19552047 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Corynebacterium glutamicum # 1 126 1 127 127 177 68.0 4e-45 MPIGKVKWYDADKGFGFVSNPGDEDVYVGRNVLPKGVDELHQGQRIEFDFAAGRRGPQAL RVKVLDVPRRRTPARKPEELASMLSDVMTLLETQVQPVLSQGRYPERKTGRQVAEILRAI AKDLDS >gi|227860904|gb|ACLH01000016.1| GENE 22 21573 - 22235 1033 220 aa, chain + ## HITS:1 COG:no KEGG:cauri_0758 NR:ns ## KEGG: cauri_0758 # Name: rpfA # Def: resuscitation-promoting factor RpfA # Organism: C.aurimucosum # Pathway: not_defined # 1 220 1 220 220 328 100.0 7e-89 MGRHSAKNKSIATKFAASTVAVGAAAAIMAPNAAAAPDSDWDRLAQCESGGNWAINTGNG YHGGLQFNAQTWQAYGGGEFAPTANLATREQQIAVAERTLAQQGWGAWPACSASLGLNSA PTPRNVSAAPAPAATQVKEETAPQAPAEAPKAVHEAAEEPTDELAVDALYTLIEDTATQY GLTIPASFTEQYKANRHDFNAFYSANRHVIDPLAQVLAAR >gi|227860904|gb|ACLH01000016.1| GENE 23 22336 - 23385 1046 349 aa, chain - ## HITS:1 COG:no KEGG:cauri_0757 NR:ns ## KEGG: cauri_0757 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 17 349 1 333 333 546 99.0 1e-154 MLHFVSETPCSIWRLEVSAVKSQEGKQPSVAVKSIVAIVGIPVVIGLMLWAFLAPTFASG PAGVPVAISAPEPMLEGISQKIESAAGDEAPEIVVKHSEAEVRDAVLQREAVGGLVISPQ GASEFTAAGNGAPYVTMIDGLAGQLEAQGMSVEKQELAPTTKEDPQASGIALLGLPLAFG GIISAVIATFAFRGKKWVKLGVLVGIALFGGLVATWMLHSVYGTLGGSFAAEWMAIAAGI LATSAVTAGLAGVMGAAGIGIGAVLTIFLANPLSGLATGPWLLPTGWSTLGQWMPIGATG HLVRSLSFFDGQGFGHAWWSLGLWIVVGLVLLACDWSRAKEDAAVEEKA >gi|227860904|gb|ACLH01000016.1| GENE 24 23377 - 24006 380 209 aa, chain + ## HITS:1 COG:no KEGG:cauri_0756 NR:ns ## KEGG: cauri_0756 # Name: not_defined # Def: HTH-type transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 9 209 1 201 201 350 100.0 2e-95 MEHSVPFGMMQAVRQDAAENKQAIVAAARQLLISEGPGVSMRSIAKKAGVGVATVSRHFP ERLSLLDAVTGAEVAHIKEEVDSHLQGFDEDPEGTWRDIIHRIASLNFAAVVQAAAAEVN TASFSDDDVQEIATQRKAELKSIYQPIVEPTRQAGLCPESLTPLELHIGIGLITRPLPRT PVSADYLSGIQAQLIDTLLDGLKAQARAN >gi|227860904|gb|ACLH01000016.1| GENE 25 24131 - 24316 312 61 aa, chain - ## HITS:1 COG:no KEGG:cauri_0755 NR:ns ## KEGG: cauri_0755 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 61 16 76 76 114 100.0 9e-25 MSNENKGFVSPAWPKNSPREHAITELTAPFAGASSPYGDDLILPMPAEKLNYVHPYTRIN R >gi|227860904|gb|ACLH01000016.1| GENE 26 24410 - 26512 2217 700 aa, chain + ## HITS:1 COG:no KEGG:cauri_0754 NR:ns ## KEGG: cauri_0754 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 700 1 700 700 1233 100.0 0 MTSPSHRARVTESYREWLSQLPDKDLRALLSNRSDVLSPAPKDFDALASRLTLPMHVADA LAASNAEQLATLEDIAQRGGEIAMVEDTNPAITKQLKERGLVFGDAPQVRIVTAVMGSLP TGWSLRNQVEFDEKDLATLAPEERRVLNALSTSDGMGYTTDTEPDINSEDPAKRLLARGF LERINAHSVRLPHSLARLLAGDTTPPIPTTPSGRAGTPEPDTKADDAGAAAGLEAVRSME RLIELLGSHPVALLKDSSVGVRPLNQLAKDLALEKEEVARLICLGHHARLLHRGEPDGLE GHFLAPTTGSQDWLEADLGEKWRILLDAWRTSPWASWAETRVLADDSIVRRLPRFRAFVL GVYAHSAVALDDEEFWEDLRFRFPLFASHTRTLTIEQLRAEAEWIGAVALGKATRVLGDS AAATSLVPKTVSEFIIQQDLTVLVPGPLEPDTHRTLASLADLESPGLASVYRISEATIRR GMDQGLTAQEMIDFLEAHSPTGVPQALGFAIGDVAKRHGTLRSGPALSYLRSEDPALLEL AVASVPGLRLLAPTVAVSQLRVGELLEKLRAKGLSPTAEDESGASLTVAPEPYLLPTPRP KAHKREPASVDQALQALQKSAQNPSAQKEEEPDPLTLARAAARFHADIVISYADKSGELR TVTVKPLSVEGGYIDALGAAGKPVRFPVHRISSVRFADRD >gi|227860904|gb|ACLH01000016.1| GENE 27 26550 - 28187 1892 545 aa, chain + ## HITS:1 COG:Cgl0793 KEGG:ns NR:ns ## COG: Cgl0793 COG1061 # Protein_GI_number: 19552043 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 3 545 6 548 557 855 79.0 0 MPGPLIVQSDKTVLLEVDHPQADEARAALAPFAELERAPEHIHTYRITPLALWNARAAGH DAEQVVDVLENYSRFPVPQALLIDVAETMSRYGRVRLLAHPAHGLILESDEPVILEELTR TKKVSELLGPRIDDNTIAVPPSARGRLKQELLKASWPADDRAGYVDGESHPIALSTEEVD WSLRDYQQYAADSFWSGGSGIVVLPCGAGKTIVGAAAMAKAQATTLILVTNTVAGRQWRD ELLRRTSLTPEEIGEYSGEKKEIKPITIATYQVVTRKTKGEYRALELFDSHDWGLIIYDE VHLLPAPVFRMTSDLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKELESAGYIA TADCVEVRVDMTQEERLLYATAQARERYRIAASASAKLRAVDKLLKKHEGQQALIIGAYV AQLEELGEHLDAPVIDGKTSTTKREKLFQQFREGELLTLVVSKVANFSIDLPEAALAIQV SGTFGSRQEEAQRLGRLLRPKKDGQEATFYTLVARESIDAEYAMHRQRFLAEQGYAYRLV DEVDL >gi|227860904|gb|ACLH01000016.1| GENE 28 28192 - 28830 788 212 aa, chain + ## HITS:1 COG:no KEGG:cauri_0752 NR:ns ## KEGG: cauri_0752 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 212 1 212 212 419 100.0 1e-116 MKIFKFEVNEDFAKKNNELLRDSARLRNSGLIMGLLIIIGGIAVYFGMEAVWRITLALGM VLFGIFCAVIGVLASRKVGSAQKLYDSYPLAPAVVAEVNERDMVLMALVNTNVDPKAPPR WGACLRTVTSIPGIKRTVGTKVPVAAVSGQRSSGDKEHWQQITPMPIAWGTPDAETVTIA RKSIPEDQWQRLERARKRLTDVKATKYDLLVL >gi|227860904|gb|ACLH01000016.1| GENE 29 28831 - 29958 1268 375 aa, chain + ## HITS:1 COG:Cgl0791 KEGG:ns NR:ns ## COG: Cgl0791 COG0436 # Protein_GI_number: 19552041 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Corynebacterium glutamicum # 3 371 7 381 387 418 61.0 1e-117 MTVERLQEFGETIFATMTALAVENDAVNLGQGFPDSDGPQRMLEIAQENIASGNNQYAPL RGVPELVDAIAETYSVPQDHVVVTAGATEAITATVLGLVEPGHEVIVLEPYYDAYAAAIA LADATRIPVPLKESGNSWDIDVDAVRAAVTDKTAMVIINTPHNPTGSVFSREALTELAEL CVEKDLLVLADEVYENLTFGTDHVSIASLPGMASRTVTVSSAAKSFNCTGWKTGWAIAEP KLLDGVIKAKQFTTFVSTTPFQPAVAHALRYEQEWLDGMVSELAECRSILVEGLKQLGFH VHDTGGTYYVVADISSTGLNGIDFCIQLPETRGVAAIPLAAFTDNPEPWKHKVRFAFCKR PEVIREAVRRLTAES >gi|227860904|gb|ACLH01000016.1| GENE 30 30024 - 30647 406 207 aa, chain - ## HITS:1 COG:no KEGG:cauri_0750 NR:ns ## KEGG: cauri_0750 # Name: not_defined # Def: HTH-type transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 207 1 207 207 362 100.0 7e-99 MSVERNTPITGTAAVIADAAIRVMVSQGLDALSVRNVATEAGVAPGTVQYQMGKRDGIIA KAFVRSLQRQESRALTQTDATDFHAAFLGRLAELLPIGPVQREDSAVWVIVGAAASTREW LADLYDAEVTKFRARVSEGLEAAQRFGKLARGLSPEQGARLVTALVNGLTIDYLNAPVDS SKQLLADLASGLALIVEPGSPKGQNGM >gi|227860904|gb|ACLH01000016.1| GENE 31 30830 - 31540 565 236 aa, chain + ## HITS:1 COG:no KEGG:cauri_0749 NR:ns ## KEGG: cauri_0749 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 236 1 236 236 349 100.0 7e-95 MSDFLPLAGLALVDSLSAGTLVIPIALIVIWRRVRLGLLGTYLATIATAYCGLGIALLLG FDAAVSRLSGVSETDWFRWVTLVLGAGLFIFGAFSPNPKKPAATQAAGPEVPKSRASRLA RGASLSASGMVGLALGAAVVEAATMLPYLGAMGIIQSMPFGFSGKVAIIAGYCIIMVLPA TLMAAIAGAAGPAIFPRLERAIRRLEYEAKVTLLWIAAIVGVYMAASSAQGLGLIG >gi|227860904|gb|ACLH01000016.1| GENE 32 31648 - 31998 229 116 aa, chain - ## HITS:1 COG:Cgl1846 KEGG:ns NR:ns ## COG: Cgl1846 COG0471 # Protein_GI_number: 19553096 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Corynebacterium glutamicum # 20 116 6 102 102 122 90.0 1e-28 MLGVSSALVITAMAVLLAILISETTSNTAGAAVTVPIVVPLAMARGVDPVIPAMAATFGA SFGFMLPISTPQNAIVYGSGCVCIARMIRTGISFDIIGGALIIFFLPTVAALVGIG Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:11:59 2011 Seq name: gi|227860903|gb|ACLH01000017.1| Corynebacterium aurimucosum ATCC 700975 contig00017, whole genome shotgun sequence Length of sequence - 6742 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 57 - 116 2.4 1 1 Tu 1 . + CDS 274 - 483 144 ## gi|262182943|ref|ZP_06042364.1| hypothetical protein CaurA7_03020 2 2 Tu 1 . - CDS 518 - 1072 429 ## gi|262182944|ref|ZP_06042365.1| hypothetical protein CaurA7_03025 3 3 Tu 1 . + CDS 1125 - 5603 3314 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 5630 - 5675 13.2 4 4 Tu 1 . - CDS 5934 - 6152 87 ## cauri_pET4482724 plasmid partitioning protein Predicted protein(s) >gi|227860903|gb|ACLH01000017.1| GENE 1 274 - 483 144 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262182943|ref|ZP_06042364.1| ## NR: gi|262182943|ref|ZP_06042364.1| hypothetical protein CaurA7_03020 [Corynebacterium aurimucosum ATCC 700975] # 1 69 1 69 69 129 100.0 9e-29 MTRRTGGRNHQSLGRVIAWYFLTFLGVMVGSMADDYEHATDETNDSPYSNPYDAAPANPG EYYDPSEQQ >gi|227860903|gb|ACLH01000017.1| GENE 2 518 - 1072 429 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262182944|ref|ZP_06042365.1| ## NR: gi|262182944|ref|ZP_06042365.1| hypothetical protein CaurA7_03025 [Corynebacterium aurimucosum ATCC 700975] # 1 184 1 184 184 303 100.0 5e-81 MCCEKGARTRRYRSTALSKAYRDSPLIASGYTELPAWCLCQEWSGTFAGIVGFMVTASRS LKKRQELRQHLEEGQRKLRDRKKSINSLLSLIDQRDELNEKIGEVSQSIIDLGEAKEFVR ELVDMSQRDFNAMLKTAQESSPSVNDSPREDESHTGDSECQDVDEAASAAEGAGGDGDHE KGGQ >gi|227860903|gb|ACLH01000017.1| GENE 3 1125 - 5603 3314 1492 aa, chain + ## HITS:1 COG:SMb21087 KEGG:ns NR:ns ## COG: SMb21087 COG0507 # Protein_GI_number: 16264414 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Sinorhizobium meliloti # 483 944 308 775 1539 128 28.0 1e-28 MTLRVVNSGTGYEYLLRSVATNDGPTDAPSLSKYYDAKGTPPGRWLGSGLAGLNTENVVQ GGEVTESQMAALYGEGLHPDADMKMSEGQKIKDVQLGRPFANFTNDVPVLVALRDAERRY RQTTGTLMGKQERAELVQNIGREFFIEEHGVEPQSGREIVNWVNGLKDNVRQSVSGFDLT FSPAKSVSVVWALSDEETARRIEKLHHQAVKEAMAWAEDNVFFTRSGKQGREQVKTKGVI ASEFKHYDTRAGDPDLHSHVLVSNKVQAEDGRWLSLDSKALHKQAQAISHRYDSILNTLL SNDMGYSFTARDHGVNKEPTWEIEGVSESLMESFSKRRRGAEPVYKRLVDEFVAARGTTP NSVEVGRLWQQAILETRDAKREPESLSELRAGWKNEVSARDNGQEELASIAQLSANSGHD ERPLFDAHEHLSGLIDDVLATVTRRRSYFRTSHVATAAGGKLQGYRFASLAERDLIHATV VEAIVRDKAIALNDFDVLELPESLKNTAGQARDTRADSELFTTQDILDTEDKALAALNEP VAAFAPSRAIDEALDGHEREAGFRLNAGQESMARYLLTCGTLAATGVGPAGTGKTASMRL VANVWANEGRNVIGLAPSAQAADVLSEDLGFDAFTIDKLTYTWRGNHPTKPGHSLKDLPV SINAGDMIIVDEAGMASTPNIGSLLEIAEEAGAVVRFIGDHKQLGAVENGGLFGAMVNAA ERTDNQLSEVVRFGGDREQSATSLRLREGDRSTFDFYSERGWVNGGARSDMLDKAAADYL ADISSGKTSLLIAATNRDVAELNETIRAHYIAHSVVDTTVEAQLSRGEKAGLGDTILARK NQTFYDDETATSTRINNGTLMTVTGIAENGSITARNQTTGDELCLPADYVHDNVQLGYAA TVHRAQGSTVDCTRAVIDHHVDRAGLYVALTRGKIANHIYAVTEHQLDELAEDGHYHYQG IDHAPSARDVFDKAISRDTTPKAAREVIAEVVDEQTSPDRMMGLWLMGKDEATNDFIDAY LPDWIDTLPGDLSRKIETSDDGTEPIRHGWVKLIDAGIDPRTVMDAATRDIDNAHDPARL IRYRLDEQLRLRDTGKRNQLPPVSGQTDIELDTWLRTHNPYDRAETTRLTGKEHNLNRLN QSVLVEHARFASSKVESLTWQEASITTRLHEDKDAAANEVQADYQQVVLDAGRIRAYEQA MADHSAALREEETARADIEHQRLLAEDYTRPVAERAYDHDVDGYGTYQQRINHAHKRLEQ AQQRRKLAQQAIEDTGANLPEAGLWEEICYRADDTEEWDKRLNAAVQHDSEHVHKLQQRL DSIRREKMDFADRADIATRLRAEEIPNDVADHAGYIADEVNLLAAQRTYELRRLGVDEPA QEAIRDMVAETIAAAYEPDNDETHHDEQDAAAQNTVEEEQPAPETTTENENADNTQDEDT SRLNEGARASMDFIASLGLDDAPHITTTHSNNHDNEEQTPTDDLEEEQSPEL >gi|227860903|gb|ACLH01000017.1| GENE 4 5934 - 6152 87 72 aa, chain - ## HITS:1 COG:no KEGG:cauri_pET4482724 NR:ns ## KEGG: cauri_pET4482724 # Name: parA # Def: plasmid partitioning protein # Organism: C.aurimucosum # Pathway: not_defined # 1 72 127 198 198 127 100.0 1e-28 MGIPTAVVLSNVDRREKLLDEVHAELEGDETAALADTVIPTRAATRRVFGTKPSSTKVWD SLAREVVAAFED Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:12:19 2011 Seq name: gi|227860902|gb|ACLH01000018.1| Corynebacterium aurimucosum ATCC 700975 contig00018, whole genome shotgun sequence Length of sequence - 10510 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 9, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 81 - 245 150 ## cur_1917 transposase for insertion sequence - Prom 331 - 390 3.8 - Term 685 - 735 -1.0 2 2 Tu 1 . - CDS 952 - 1470 159 ## COG1846 Transcriptional regulators - Prom 1498 - 1557 6.2 + Prom 1448 - 1507 4.5 3 3 Tu 1 . + CDS 1630 - 2310 271 ## COG0135 Phosphoribosylanthranilate isomerase 4 4 Tu 1 . + CDS 2748 - 2960 239 ## COG0035 Uracil phosphoribosyltransferase 5 5 Tu 1 . - CDS 4097 - 4237 72 ## gi|262182952|ref|ZP_06042373.1| hypothetical protein CaurA7_03065 + Prom 5741 - 5800 2.7 6 6 Op 1 . + CDS 6038 - 6808 46 ## cauri_pET4482718 hypothetical protein 7 6 Op 2 . + CDS 6818 - 7048 157 ## Ctu_21130 4-oxalocrotonate tautomerase 8 7 Tu 1 . + CDS 7527 - 7982 -21 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis 9 8 Op 1 . + CDS 8630 - 8899 129 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 10 8 Op 2 . + CDS 8909 - 9556 133 ## COG2910 Putative NADH-flavin reductase + Prom 10089 - 10148 2.0 11 9 Tu 1 . + CDS 10183 - 10359 106 ## cauri_pET4482714 hypothetical protein Predicted protein(s) >gi|227860902|gb|ACLH01000018.1| GENE 1 81 - 245 150 54 aa, chain - ## HITS:1 COG:no KEGG:cur_1917 NR:ns ## KEGG: cur_1917 # Name: tnp7109-58 # Def: transposase for insertion sequence # Organism: C.urealyticum # Pathway: not_defined # 1 54 396 449 449 102 87.0 7e-21 MICNIEDKRAAKRAKQAKRAVECNGYTEGAKANGWKQAIDQLAVAYPDRFADYL >gi|227860902|gb|ACLH01000018.1| GENE 2 952 - 1470 159 172 aa, chain - ## HITS:1 COG:mlr3448 KEGG:ns NR:ns ## COG: mlr3448 COG1846 # Protein_GI_number: 13472981 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 1 159 1 160 164 94 37.0 6e-20 MLRDQRPSALIEQWIETRPDTDIRGMLVTSRIIHLRQALEDVLSDCHESVGLRGWEFDVL ATLRRQRPGVRLTHKELSDLAMVSKSAISQRIDRLVDRGLVRRVENPDQRREVFVELTEQ GYLLVERVIDEHASLCSEFISPLNDDEYEQLNGLLDKLLIRSEQAPGYPSNL >gi|227860902|gb|ACLH01000018.1| GENE 3 1630 - 2310 271 226 aa, chain + ## HITS:1 COG:MA2988 KEGG:ns NR:ns ## COG: MA2988 COG0135 # Protein_GI_number: 20091806 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Methanosarcina acetivorans str.C2A # 5 217 36 255 261 89 30.0 4e-18 MDPVIQVAGIHDIEEAKLAIESGANWLGIPLRLPSGKDDISEEDTKHLIEQLGSQAKFVL ITYSSSAEELTSLVKELNFDAVQLHGDISVEEVQALRDMNPSIQILKSLVVKQDNHSQLL STVREMEDVVDMFLTDTYNPDTGAKGATGLQHDLTVSKKIVESTRKPVIIAGGLNPTNVA EAIAFVRPAGVDAHTGLEGKDGRKDRHLVEKFSEESRRQFKELDEE >gi|227860902|gb|ACLH01000018.1| GENE 4 2748 - 2960 239 70 aa, chain + ## HITS:1 COG:SPAC1B3.01c KEGG:ns NR:ns ## COG: SPAC1B3.01c COG0035 # Protein_GI_number: 19115697 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Schizosaccharomyces pombe # 1 65 151 215 219 62 41.0 2e-10 MDRLMLAGVSESSIISVNYLASPDGIKYAEENHPQATFVVASIEQKLDANGFMLPGIGDF GDRFFSKTYP >gi|227860902|gb|ACLH01000018.1| GENE 5 4097 - 4237 72 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262182952|ref|ZP_06042373.1| ## NR: gi|262182952|ref|ZP_06042373.1| hypothetical protein CaurA7_03065 [Corynebacterium aurimucosum ATCC 700975] # 5 46 1 42 42 69 97.0 8e-11 MGLVVVGYFVKFNAISAQFDLIISSSNKDELTIRVATDEISCFISR >gi|227860902|gb|ACLH01000018.1| GENE 6 6038 - 6808 46 256 aa, chain + ## HITS:1 COG:no KEGG:cauri_pET4482718 NR:ns ## KEGG: cauri_pET4482718 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 256 1023 1278 1278 526 100.0 1e-148 MWPGLGGLPLNLRKLAGSVNLNGRVLGIQAQGLNEGEEILKDLDEVARKDIQLLPKNAEL NLIGYSFGARVAIKAATQLAQMGRQVRSLTLLCPGNPTLAPDNSIEQTGSRDSSVDNPEF LGMLLSVFNSPLRADDFRSARRSCQTIEDAIKFIHAKNKDISYGQVSRIVRLVATQYQFE YTFDEIEHYQPVCPTLVVKAKGDKYSSIDALLSANGEFMKSIEVEVDHYEILKPPFVTTL GNTIRDFQHYSSTVNK >gi|227860902|gb|ACLH01000018.1| GENE 7 6818 - 7048 157 76 aa, chain + ## HITS:1 COG:no KEGG:Ctu_21130 NR:ns ## KEGG: Ctu_21130 # Name: pptA # Def: 4-oxalocrotonate tautomerase # Organism: C.turicensis # Pathway: Benzoate degradation [PATH:ctu00362]; Dioxin degradation [PATH:ctu00621]; Metabolic pathways [PATH:ctu01100]; Microbial metabolism in diverse environments [PATH:ctu01120] # 1 74 1 74 76 65 43.0 9e-10 MPHIEIYHFPNSMSDSDRSALADEVTEVIAAHFPTKPGKVSIRLNSIDERDWEEAVVEKM LIPQRATLIREPDYLA >gi|227860902|gb|ACLH01000018.1| GENE 8 7527 - 7982 -21 151 aa, chain + ## HITS:1 COG:SA0301 KEGG:ns NR:ns ## COG: SA0301 COG2313 # Protein_GI_number: 15926014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Staphylococcus aureus N315 # 1 136 165 300 307 79 33.0 2e-15 MDIPKTSEVLESLGVPVVGFGTSEFPAFYCRKSGAFLESFSQDPIEIATAAATHIETVGP GGFLILVAPSKEIALDDELVEKAVQRSLINASSQGVRGKAITKFVMRAIDSETDNRSQTA NFDVMVEVVNAAAQIARSLKPEFFLDSVAKK >gi|227860902|gb|ACLH01000018.1| GENE 9 8630 - 8899 129 89 aa, chain + ## HITS:1 COG:AGc468 KEGG:ns NR:ns ## COG: AGc468 COG0697 # Protein_GI_number: 15887623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 72 210 281 287 56 50.0 1e-08 MGYLWLSLVGGLLTYWAWFSGLAKVSAVSAGFLPLLSPLVATLLGLVILGESLSTIQWLG FLLCLCTILLSQLQPSQFLSFLKFKDSSS >gi|227860902|gb|ACLH01000018.1| GENE 10 8909 - 9556 133 215 aa, chain + ## HITS:1 COG:SP1627 KEGG:ns NR:ns ## COG: SP1627 COG2910 # Protein_GI_number: 15901463 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Streptococcus pneumoniae TIGR4 # 3 210 1 200 209 84 29.0 1e-16 MKMHILILGANGQVGAVLSRLAISRGHSVSGVTRSSTPDFLSGPGTQLIHGDAYDKNFLT SVASGVDVVVNATRPSPGREAELVQGSINVAEVCHDLGVRLVVSGGAGSLPVSDDEGAPR TINTEFVQDAWRDIAVASTNQFDTLMESLPDSDWTYVAPPANLIDGPELGNYRLSFSSLV QNQDGVSELSWRDFADLLLNEIESPSGHRIVTGGY >gi|227860902|gb|ACLH01000018.1| GENE 11 10183 - 10359 106 58 aa, chain + ## HITS:1 COG:no KEGG:cauri_pET4482714 NR:ns ## KEGG: cauri_pET4482714 # Name: ymaE # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 58 210 267 267 123 100.0 2e-27 MWSYPNLLPLGRTEVDRMVDRFPPTNASKAFDNFGRSVTGDIDNIFRLSAQNHNSHLV Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:12:37 2011 Seq name: gi|227860901|gb|ACLH01000019.1| Corynebacterium aurimucosum ATCC 700975 contig00019, whole genome shotgun sequence Length of sequence - 10968 bp Number of predicted genes - 16, with homology - 13 Number of transcription units - 11, operones - 5 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 551 - 1051 -84 ## + Term 1281 - 1312 1.6 - TRNA 1131 - 1205 54.2 # Val AAC 0 0 + Prom 1305 - 1364 4.6 2 2 Op 1 . + CDS 1432 - 1686 128 ## cauri_pET4482712 hypothetical protein 3 2 Op 2 . + CDS 1686 - 2315 450 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 2379 - 2410 -0.1 + Prom 2404 - 2463 4.4 4 3 Tu 1 . + CDS 2557 - 2796 265 ## gi|262182962|ref|ZP_06042383.1| hypothetical protein CaurA7_03115 + Term 2856 - 2900 11.1 5 4 Tu 1 . + CDS 3265 - 3414 169 ## cauri_pET4482709 hypothetical protein + Term 3420 - 3467 12.3 - Term 3364 - 3402 2.8 6 5 Op 1 . - CDS 3501 - 3650 81 ## 7 5 Op 2 . - CDS 3707 - 3934 82 ## cauri_pET4482708 hypothetical protein 8 6 Tu 1 . + CDS 3933 - 4103 68 ## COG3316 Transposase and inactivated derivatives + Term 4212 - 4255 3.1 9 7 Op 1 . - CDS 4556 - 4804 76 ## 10 7 Op 2 . - CDS 4817 - 6661 1009 ## COG0477 Permeases of the major facilitator superfamily 11 8 Op 1 . + CDS 6766 - 7170 62 ## COG0640 Predicted transcriptional regulators 12 8 Op 2 . + CDS 7262 - 7486 200 ## cauri_pET4482704 hypothetical protein 13 9 Op 1 23/0.000 - CDS 7487 - 8398 204 ## COG2801 Transposase and inactivated derivatives 14 9 Op 2 . - CDS 8395 - 8733 368 ## COG2963 Transposase and inactivated derivatives - Term 9392 - 9430 4.0 15 10 Tu 1 . - CDS 9442 - 10392 711 ## cauri_pET4482701 replication protein - Prom 10630 - 10689 2.4 16 11 Tu 1 . - CDS 10769 - 10918 162 ## gi|262182973|ref|ZP_06042394.1| hypothetical protein CaurA7_03180 Predicted protein(s) >gi|227860901|gb|ACLH01000019.1| GENE 1 551 - 1051 -84 166 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVKDDFPESLATRSIVEVAVLSEYQNMDIGQKLVEQAEKAFVEAGATISLLYVDSRSPE STHRFWKKMGYTPGDPNKKGEYCTGLPPEASTMAKLRSGRAGTAYYRYLESPRKLQVAKT PSTQSQPEATTVEVAETPRSWLRQRPLSISLLTAIIVVVSVLFWIL >gi|227860901|gb|ACLH01000019.1| GENE 2 1432 - 1686 128 84 aa, chain + ## HITS:1 COG:no KEGG:cauri_pET4482712 NR:ns ## KEGG: cauri_pET4482712 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 84 1 84 84 144 100.0 2e-33 MLSSDGFHIESHIDSVPALARVKDLHGGLSSGQQALGRIVQALLANADGLDGIQLYALSD AIESYRDAVIAQENAAFKPSRGED >gi|227860901|gb|ACLH01000019.1| GENE 3 1686 - 2315 450 209 aa, chain + ## HITS:1 COG:Cgl1671 KEGG:ns NR:ns ## COG: Cgl1671 COG1961 # Protein_GI_number: 19552921 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Corynebacterium glutamicum # 15 195 1 181 184 206 60.0 2e-53 MGKSSGSHGQRVGYIRVSTVEQNNQRQKELLNTSGSIDRFFEDKISGRTKTERPGLRECM AYVRDGDELVVSSIDRLARSLTDLRGIVDELTDKGVTVTFLHENLSFSKDTSDPRADLML SILGSFAEFERAIIRERQAEGIALAKKAGKYKGRKPALNPQQVAEIKQRVLAGESKASLA REFGVTRPTVYRALKKRLKQREIRVNNVA >gi|227860901|gb|ACLH01000019.1| GENE 4 2557 - 2796 265 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262182962|ref|ZP_06042383.1| ## NR: gi|262182962|ref|ZP_06042383.1| hypothetical protein CaurA7_03115 [Corynebacterium aurimucosum ATCC 700975] # 1 79 1 79 79 126 100.0 6e-28 MKLSWALWWTVTLIEVLSFIALSAFLLVRSEDAAGAQQTIELRLLNVAIPIFTYLIPFVL QVVWFILNKRAEKKVTHRP >gi|227860901|gb|ACLH01000019.1| GENE 5 3265 - 3414 169 49 aa, chain + ## HITS:1 COG:no KEGG:cauri_pET4482709 NR:ns ## KEGG: cauri_pET4482709 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 49 1 49 49 70 100.0 2e-11 MGKHSLDTPGRKRKDLDATKLSRLDVAIKVITLATVTVKLIAVTLHMGL >gi|227860901|gb|ACLH01000019.1| GENE 6 3501 - 3650 81 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPKHMFRHMAGLSDAQRRANDYADFCPQQRKRSYAPVWEYCETFARPLA >gi|227860901|gb|ACLH01000019.1| GENE 7 3707 - 3934 82 75 aa, chain - ## HITS:1 COG:no KEGG:cauri_pET4482708 NR:ns ## KEGG: cauri_pET4482708 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 31 75 1 45 45 67 100.0 1e-10 MAVIISRRSSYCPNFATAPYAALGGSISAAMILVPSFLFTQAGLSRELAALLIAFGLLAL WTTIFGLRLNARTSR >gi|227860901|gb|ACLH01000019.1| GENE 8 3933 - 4103 68 56 aa, chain + ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 39 1 39 236 78 89.0 3e-15 MGIFSGRHFPRDIILWAVRWYCRYGVSYRDLEEMMTSAGRAGRSHHDLPLGPEIRP >gi|227860901|gb|ACLH01000019.1| GENE 9 4556 - 4804 76 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHHRRRSKKPPVERVLCSETGKREYEGAVAKLGGEPRTLLSSSPGQHYGPACLDILEDP VDDHRVRVRLPVGKHRALPFPQ >gi|227860901|gb|ACLH01000019.1| GENE 10 4817 - 6661 1009 614 aa, chain - ## HITS:1 COG:mll2542 KEGG:ns NR:ns ## COG: mll2542 COG0477 # Protein_GI_number: 13472297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 161 580 1 423 505 282 40.0 1e-75 MNGDRQRLRGHYDEDFYWERVDRNLGWLGDTTEEQRERQERLLAVPSYDALNFHPSPLPR YAGLAPFYWMAENHETQGGVSAVRTTAGLDEGPSSPSNSSRSPGGDGQGDPGHALRRVLA PVRSGAADTAGPVLPDLGSRPEQAHLLRPPARRGFAGVSRMTAHRRTALVATLLGFFIVM LDTTIVNVALAEIGTDLDTTVGSLQWVVDAYTLVFAAFLLTAGAACDRLGARRVYLAGLV VFAVLSAVCALAPTGGFLVAGRAVQGVGAAAIVPGSLALLSAVYDDPKERARAIGLWGGA GGVAAAIGPVLGGALVSTIGWRAVFWVNLPIVAIGCLLTLWAIPALTGSRARRVDLPGQV LSVLTLVAVTYAVITAGEHGWSPWQVGALIAGGVFLALFIIAERRHPDPMLPMALFTRAR FSVAAMVGLALNISFFGQLFVLSLFFQQYLGYEPWQAGLALAPQACSAVVASPLGGRAVA RWGAFPTMLTGLVVGTIGFSSLVLLTAETPYVVVAVLTFTAGFGMAFAMPAATSAAVASA PPEHVGIAGGVINAARQTGSVVGVAVLGGMVASGAFLTGFHTAVAVAGGVFGAAALVVAA TIISHLQEPVTPEV >gi|227860901|gb|ACLH01000019.1| GENE 11 6766 - 7170 62 134 aa, chain + ## HITS:1 COG:BMEI0150 KEGG:ns NR:ns ## COG: BMEI0150 COG0640 # Protein_GI_number: 17986434 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Brucella melitensis # 11 130 27 143 243 89 43.0 1e-18 MVARVFPEAVPDISTVASALADSSRAAMCAALMDGRAWTVGELGRYAGLARSTASEHVDV LVTHGLVHDIRQGRHRYIRLAGEDIARVVESLGVVARSPLPTPHSLSASRANANLREGRT CYQHLAGKLGGAPG >gi|227860901|gb|ACLH01000019.1| GENE 12 7262 - 7486 200 74 aa, chain + ## HITS:1 COG:no KEGG:cauri_pET4482704 NR:ns ## KEGG: cauri_pET4482704 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 74 166 239 239 146 100.0 3e-34 MLDTGRSCMDSTERRFHLAGPLGTGICKTLLDKEWLSRRGRTRAVRLTPAGRAALNDAGI SLNGPEPRKVDTGI >gi|227860901|gb|ACLH01000019.1| GENE 13 7487 - 8398 204 303 aa, chain - ## HITS:1 COG:Cgl2704 KEGG:ns NR:ns ## COG: Cgl2704 COG2801 # Protein_GI_number: 19553954 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 303 1 298 298 400 66.0 1e-111 MNRFRFVDDHRDLYEVKRLCQVLKINRSSYYAWKSAAPARRQRLVDDAVLGAQIKTTFNA ENGCYGAKRVTAAINSDPVNDRGKGGRLNHKRTARLMRQMGLFGFTRKRRVKTTTSSKRA PRFPDLLQRRFTADRPNAVYVGDITYLPIADGSNMYLATVIDCYSRQLTGFAIADHMRTE LVEEALTMARKVRGSLDGAIFHSDHGSVYTSDQYRRLCVRFGVTQSTGAIGTSADNSLAE SFNASLKREVLQDESVFTSQLDCRQDVFRWCTRYNTKRLHSWCGYRSPNAFEDAGLATLT IAS >gi|227860901|gb|ACLH01000019.1| GENE 14 8395 - 8733 368 112 aa, chain - ## HITS:1 COG:Cgl1688 KEGG:ns NR:ns ## COG: Cgl1688 COG2963 # Protein_GI_number: 19552938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 112 1 98 98 100 55.0 5e-22 MPRKTYTERFKRDAVSLYESTPGATINAIASDLGVNRNSPRSWLDAFGTRTKTNANGEKV ASLIAASDSATAASGLSDAERIRVLERENAKLREEREILRKAAKYFAEETNW >gi|227860901|gb|ACLH01000019.1| GENE 15 9442 - 10392 711 316 aa, chain - ## HITS:1 COG:no KEGG:cauri_pET4482701 NR:ns ## KEGG: cauri_pET4482701 # Name: repW # Def: replication protein # Organism: C.aurimucosum # Pathway: not_defined # 1 316 1 316 316 630 100.0 1e-179 MQPRDERRAKLEAVKELARRQEHDAAQELLQAQDVGYTSKLFVQALFPYRKAENNERVVE TAQGIISVYSRRGLPYGKYPRLIMAYVITRAVENAGRLKEGKIDEQEARRVPLGHSMNHF LQAIGVLGRGTGGATGNLKNIREQILRIAGSTITVESDDGVHAQGSNTQILDGWNLWFDP RDPNQGSFIESELVLTEKFFNHIAESPIPIDLNVLRQLTKPRAMDLYIWLTLKQYWLAKN NREAYTFTWDMIAANFSTKELETSQDVASFRRNFKSAISDILKAWPEAGIGAGTDGVTVT RTAPSVQQKPPRPELD >gi|227860901|gb|ACLH01000019.1| GENE 16 10769 - 10918 162 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262182973|ref|ZP_06042394.1| ## NR: gi|262182973|ref|ZP_06042394.1| hypothetical protein CaurA7_03180 [Corynebacterium aurimucosum ATCC 700975] # 1 49 1 49 49 69 100.0 7e-11 MAITAMLPKLEESHWNQVAADFEEKTINNLFNQIMLNGLKDEPEEQEQE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:13:20 2011 Seq name: gi|227860900|gb|ACLH01000020.1| Corynebacterium aurimucosum ATCC 700975 contig00021, whole genome shotgun sequence Length of sequence - 943 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 35 - 301 82 ## + Prom 77 - 136 2.8 2 2 Tu 1 . + CDS 351 - 524 70 ## + Term 674 - 708 2.8 3 3 Tu 1 . - CDS 432 - 929 315 ## COG1484 DNA replication protein Predicted protein(s) >gi|227860900|gb|ACLH01000020.1| GENE 1 35 - 301 82 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSCSISAVLVAHSPLDSMQVADSGLWALDDAHAAGLCFRVCTFGCFWTWGSGGLITQHCR WFSVAVNELVTVRPPCCFGGLEDTERDR >gi|227860900|gb|ACLH01000020.1| GENE 2 351 - 524 70 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFRRPGTAGFRVVGTGAGPTESARLFALFVQFYWGGGFAHVEVSDMDSVAVVEAAYE >gi|227860900|gb|ACLH01000020.1| GENE 3 432 - 929 315 165 aa, chain - ## HITS:1 COG:SMa0776 KEGG:ns NR:ns ## COG: SMa0776 COG1484 # Protein_GI_number: 16262872 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Sinorhizobium meliloti # 6 156 89 239 245 91 33.0 6e-19 MRQLKRIAATNWRENPTNIHILAPTGTGKTYIACAIGIAACKAGYSVAYYRLGQLVDMLA VFSPTDQNYLDKMRKLINVDVLIIDDFMTISINQRGQEDLTKIIFDRDGRLPTLISSQSA AAYWVETLPDRVGADSLVSRLNNGHRIHIGDFDMRKATAPIELDE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:13:32 2011 Seq name: gi|227860899|gb|ACLH01000021.1| Corynebacterium aurimucosum ATCC 700975 contig00022, whole genome shotgun sequence Length of sequence - 1357 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 784 353 ## cauri_0198 putative transposase Predicted protein(s) >gi|227860899|gb|ACLH01000021.1| GENE 1 1 - 784 353 261 aa, chain - ## HITS:1 COG:no KEGG:cauri_0198 NR:ns ## KEGG: cauri_0198 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 261 138 398 399 533 100.0 1e-150 MRLLDEIAPPQLVTCDGDSGGLKALRHLWPDTPVQRCIVHVKRNIQRATGLHPTSPMGKA LRRLSFELLAVDNLDEAAEWTAKLHQFGTVFSAQLKAKTYVKDVPFEQIPKSKRGNKKWW YTHDVHRGIYLQLKKMSQHGHLFAYLTQAKEGQRLERTTNSLEGGVNSQIKKLMHAHRGL RDEQQRIACDWWLYLHTQLPGDPVEIARQQNWGQDALAKAQTLANQETQATSGHEDGRPA TYDSAIDTAYNHSMGIRKGHI Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:13:37 2011 Seq name: gi|227860898|gb|ACLH01000022.1| Corynebacterium aurimucosum ATCC 700975 contig00024, whole genome shotgun sequence Length of sequence - 1162 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 233 - 1160 984 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases Predicted protein(s) >gi|227860898|gb|ACLH01000022.1| GENE 1 233 - 1160 984 309 aa, chain + ## HITS:1 COG:Cgl2240 KEGG:ns NR:ns ## COG: Cgl2240 COG0635 # Protein_GI_number: 19553490 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Corynebacterium glutamicum # 46 308 1 263 332 375 69.0 1e-104 MDPFGLYIHVPFCASRCGYCDFNTYTPGELGGDLTSDYLVALEKELEMAAVQVDREAETV FIGGGTPSLLGAEGLGRVLSKVRDTFGLAPGAEVTTESNPESTSPEYFAGLLDAGFTRLS LGMQSASPGVLAVLERAHTPGRAFDAAREAIAAGFEHVNLDMIYGTPTEEDADVALTLER ALETGVDHISAYSLIVEDGTRMARKVSKGLLPAPDEDVLARRYEMISSTLEAEGFEWYEV SNWAKPGGECQHNRIYWVDGNWWGAGPGAHSHLGNERFYNVKNPRTYIKAVGEGELPIKE REQLTEADR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:13:38 2011 Seq name: gi|227860897|gb|ACLH01000023.1| Corynebacterium aurimucosum ATCC 700975 contig00075, whole genome shotgun sequence Length of sequence - 1687 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 144 - 203 2.8 1 1 Tu 1 . + CDS 332 - 1540 679 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|227860897|gb|ACLH01000023.1| GENE 1 332 - 1540 679 402 aa, chain + ## HITS:1 COG:Cgl1010 KEGG:ns NR:ns ## COG: Cgl1010 COG3547 # Protein_GI_number: 19552260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 402 1 402 402 630 79.0 1e-180 MTYDYVIGMDVGKYFHHACVLDIDGTQVLSKRINQNEKSLRALFSAFSAHDHKVLVVVDQ PNNIGRLTVAVAQELGIDVRYLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLR SVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCYPQFEQALRGQIIHRKWVLH LLARYGGPTKIKRLGKAKATAFARRYKARNPEPVLDAIFAAISEQTVAIAGAHYAEMGVA MSAKDALLKLEHRTQIEQEVIELINDIPHTQILLSMPGIGPKTAAQILMTAGDMTDFPTA GHLASYAGLSPRTNQSGTSIMSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRR EGKRHNAAVVALARRRLNVLYAMMRNHKHYHDPAPSQEDLAA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:13:39 2011 Seq name: gi|227860896|gb|ACLH01000024.1| Corynebacterium aurimucosum ATCC 700975 contig00078, whole genome shotgun sequence Length of sequence - 3636 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 128 59 ## cauri_0280 fatty acid synthase (EC:1.1.1.100 1.3.1.10 2.3.1.39 2.3.1.41 2.3.1.85 2.3.1.38 3.1.2.14 4.2.1.60 4.2.1.61) + Term 172 - 223 17.1 2 2 Op 1 . + CDS 487 - 1077 170 ## DIP2317 DNA-binding protein 3 2 Op 2 . + CDS 1016 - 1765 340 ## COG3177 Uncharacterized conserved protein 4 2 Op 3 . + CDS 1779 - 1916 63 ## - Term 1851 - 1889 9.3 5 3 Tu 1 . - CDS 1903 - 3063 1519 ## COG1690 Uncharacterized conserved protein Predicted protein(s) >gi|227860896|gb|ACLH01000024.1| GENE 1 3 - 128 59 41 aa, chain + ## HITS:1 COG:no KEGG:cauri_0280 NR:ns ## KEGG: cauri_0280 # Name: fas-IB # Def: fatty acid synthase (EC:1.1.1.100 1.3.1.10 2.3.1.39 2.3.1.41 2.3.1.85 2.3.1.38 3.1.2.14 4.2.1.60 4.2.1.61) # Organism: C.aurimucosum # Pathway: Fatty acid biosynthesis [PATH:car00061]; Metabolic pathways [PATH:car01100] # 1 41 2949 2989 2989 77 100.0 1e-13 ARDAKVMIDGYGLVDADKAAEISMLLDADARLGSNGEFSSV >gi|227860896|gb|ACLH01000024.1| GENE 2 487 - 1077 170 196 aa, chain + ## HITS:1 COG:no KEGG:DIP2317 NR:ns ## KEGG: DIP2317 # Name: not_defined # Def: DNA-binding protein # Organism: C.diphtheriae # Pathway: not_defined # 1 178 1 178 411 170 51.0 4e-41 MAKTVELEWIPADGSGLSRRAKQGGKYHAFVPDPLAGMSLKLPSELSRRIVRIEREIHNL GMRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAV ARNVAILDTINTDLAYKDELVLDDIVAMQTALVAEKPLQGVRTTQNWIGGSDYHPIDAAF VPPASYTSPRTPRRSH >gi|227860896|gb|ACLH01000024.1| GENE 3 1016 - 1765 340 249 aa, chain + ## HITS:1 COG:VNG6349C KEGG:ns NR:ns ## COG: VNG6349C COG3177 # Protein_GI_number: 16120251 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Halobacterium sp. NRC-1 # 6 199 216 398 424 84 33.0 1e-16 MRLLSPPPPTQVPGLLDDLIEYFNGADHAALVQAALVHAQFETIHPFPDGNGRVGRAMIH ALLQRRGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISFFVEAAQVATTKAAEL ADSVAALEAEWMDKVNHHRTAQGSKRALKSNSTEFQLLKKLPAMPLVTVSIVKSELGISS TSTARDALDSLTDAGILRKKVIGAGGLLGYFADDVFMLVDDAERQLASTQFNTRLSPPTG RAVPALRDK >gi|227860896|gb|ACLH01000024.1| GENE 4 1779 - 1916 63 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVTHFVSLHKAKRRADATLQEGTSESLKGTVTKNDGPIMAQVRCP >gi|227860896|gb|ACLH01000024.1| GENE 5 1903 - 3063 1519 386 aa, chain - ## HITS:1 COG:Cgl2945 KEGG:ns NR:ns ## COG: Cgl2945 COG1690 # Protein_GI_number: 19554195 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 5 386 6 383 383 513 65.0 1e-145 MRLHNFASIVEDKTVAQAQLVADLPFVHPHVALMPDAHFGKGSSVGTVFGTLRAVIPAAV GVDIGCGMIAVRTHLTHAEIQDFALEDLRTAVEDSIPLSPGNYNGWIMDPRTEARTRELS QLAQDTGVDLGHSKNWRQQLGSLGGGNHFIELCLDESDRVWLFLHSGSRGVGNKIAQKHI KAAQRHCEKHWIQLADKDLAYLVEGTEEFDSYIADLHWAQHFALLNRDEMMDRFLDCVAT WSGADREALELERINCRHNYTQRENHYGKNVWLTRKGAIKADEGDRGLIPGSMGTASYVV EGKGYPPGLKSASHGAGRVMSRTQAKARFTEADLAARMEGIVYRPGAEFVDEIPDAYKDI DRVMADAAQLVEVKHTLRQILNVKGT Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:14:02 2011 Seq name: gi|227860895|gb|ACLH01000025.1| Corynebacterium aurimucosum ATCC 700975 contig00080, whole genome shotgun sequence Length of sequence - 34916 bp Number of predicted genes - 36, with homology - 35 Number of transcription units - 20, operones - 9 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 267 - 1235 583 ## cauri_2427 hypothetical protein 2 1 Op 2 8/0.000 - CDS 1253 - 2053 909 ## COG1131 ABC-type multidrug transport system, ATPase component 3 1 Op 3 . - CDS 2050 - 2424 254 ## COG1725 Predicted transcriptional regulators - Prom 2622 - 2681 3.4 4 2 Tu 1 . + CDS 2651 - 3868 925 ## COG1432 Uncharacterized conserved protein 5 3 Tu 1 . - CDS 3975 - 4790 1073 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Term 4847 - 4897 13.1 6 4 Tu 1 . - CDS 4948 - 5313 525 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 5362 - 5421 2.9 7 5 Op 1 . + CDS 5461 - 5661 317 ## Tbis_3354 heavy metal transport/detoxification protein 8 5 Op 2 1/0.111 + CDS 5667 - 7838 2012 ## COG2217 Cation transport ATPase 9 5 Op 3 . + CDS 7850 - 9184 1336 ## COG0477 Permeases of the major facilitator superfamily 10 5 Op 4 . + CDS 9174 - 9677 328 ## COG4767 Glycopeptide antibiotics resistance protein + Term 9765 - 9817 -0.1 11 6 Tu 1 . - CDS 9679 - 11103 1589 ## COG0305 Replicative DNA helicase - Term 11588 - 11659 19.5 12 7 Op 1 1/0.111 - CDS 11748 - 12200 735 ## PROTEIN SUPPORTED gi|227834260|ref|YP_002835967.1| 50S ribosomal protein L9 13 7 Op 2 24/0.000 - CDS 12247 - 12837 831 ## COG0629 Single-stranded DNA-binding protein 14 7 Op 3 . - CDS 12889 - 13188 487 ## PROTEIN SUPPORTED gi|227834262|ref|YP_002835969.1| 30S ribosomal protein S6 15 8 Op 1 . - CDS 13327 - 13509 91 ## cauri_2441 hypothetical protein 16 8 Op 2 3/0.000 - CDS 13506 - 14909 1352 ## COG5650 Predicted integral membrane protein 17 8 Op 3 . - CDS 14925 - 17012 2358 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 17181 - 17240 2.8 18 9 Tu 1 . + CDS 17005 - 17226 65 ## 19 10 Tu 1 1/0.111 + CDS 17748 - 18227 594 ## COG1846 Transcriptional regulators + Prom 18229 - 18288 4.0 20 11 Op 1 . + CDS 18311 - 19294 715 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 21 11 Op 2 . + CDS 19306 - 19788 568 ## cauri_2447 hypothetical protein 22 12 Tu 1 . - CDS 19795 - 20724 1136 ## COG1054 Predicted sulfurtransferase 23 13 Tu 1 . - CDS 20947 - 22443 1910 ## COG4868 Uncharacterized protein conserved in bacteria - Prom 22476 - 22535 2.4 + Prom 22362 - 22421 1.8 24 14 Op 1 . + CDS 22521 - 23336 783 ## COG0266 Formamidopyrimidine-DNA glycosylase 25 14 Op 2 . + CDS 23347 - 24945 360 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 + Term 25038 - 25077 -0.3 26 15 Op 1 . - CDS 25107 - 25931 937 ## COG5522 Predicted integral membrane protein 27 15 Op 2 36/0.000 - CDS 25985 - 26665 276 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 28 15 Op 3 . - CDS 26635 - 27630 1254 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 27591 - 27650 2.2 29 16 Op 1 19/0.000 + CDS 27743 - 28912 1050 ## COG4585 Signal transduction histidine kinase 30 16 Op 2 . + CDS 28887 - 29507 773 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 31 16 Op 3 . + CDS 29508 - 30518 945 ## COG2072 Predicted flavoprotein involved in K+ transport + Term 30684 - 30719 -0.5 - Term 30371 - 30413 10.6 32 17 Tu 1 . - CDS 30522 - 31094 506 ## COG4767 Glycopeptide antibiotics resistance protein - Prom 31286 - 31345 1.7 33 18 Tu 1 . + CDS 31181 - 32146 1102 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 34 19 Op 1 . - CDS 32177 - 32341 310 ## cauri_2459 hypothetical protein 35 19 Op 2 . - CDS 32367 - 33986 2233 ## COG0733 Na+-dependent transporters of the SNF family - Prom 34068 - 34127 3.9 + Prom 34065 - 34124 2.0 36 20 Tu 1 . + CDS 34329 - 34914 696 ## COG3573 Predicted oxidoreductase Predicted protein(s) >gi|227860895|gb|ACLH01000025.1| GENE 1 267 - 1235 583 322 aa, chain - ## HITS:1 COG:no KEGG:cauri_2427 NR:ns ## KEGG: cauri_2427 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 322 7 328 328 484 100.0 1e-135 MALSWISFFYALWIVILPVLGMDRGQGWAIGYSLLMALQLYLVQPDFSRYLTFGLSTRVW NGHRRINASLALLLLLVSAPWAFPWWTLIAPTAVWIFCMAKRVEPSRLTTSSLIVGSDGD SSTGWFSASPVSQIVLRPQARAWMWAAFGIAIATAINIVVSKLWDKGVGIVGAIVTLIVL PLVADAVRSSMKDAVTYGVPRAAWSTATLLCTAIPVGLGAVTDVVTLMWTGSLAGFTIVP LAMAAVLVSFAITDKETWPYTAATAGAIAAVLLAWLLKSDIPVWWPLAGMGVLYLVWAAV LPRMAQKVNVFTPGLMGWFGVR >gi|227860895|gb|ACLH01000025.1| GENE 2 1253 - 2053 909 266 aa, chain - ## HITS:1 COG:BH3493 KEGG:ns NR:ns ## COG: BH3493 COG1131 # Protein_GI_number: 15616055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 234 19 271 283 135 32.0 1e-31 MISTPHFTFDDGLTHGLVGPNGIGKTTLMRKISGQLGGSGIKVDGDKPYDNEKVLNKIVL MGIDNPLPEGWNMKKIFTVASLRWPTWDKERAEELVERFELPMKNYSGLSRGQKSAASFI VAVASGVPYMLLDEPYLGLDAAKREVFYDVLREEHGRTIIVSTHHLNELSGLLDTVALMG ESPLSGPIDEFIEGVVQLTGSAETLDRALGRLQLPVLERESSAVADRALVDARPNHTANV FAMAQEMGLRATEVSLEQAVLALGEA >gi|227860895|gb|ACLH01000025.1| GENE 3 2050 - 2424 254 124 aa, chain - ## HITS:1 COG:Cgl2882 KEGG:ns NR:ns ## COG: Cgl2882 COG1725 # Protein_GI_number: 19554132 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 7 123 4 120 121 151 67.0 2e-37 MDNSAQPLFRQIAVLIEDAIIEGTLAEGAQAPSTNELAAFHSINPATARKGLTLLVDLGI LEKRRGIGMFVTSGAADLIRARRRQDFAAEYAAPLIDEAVHLGYTRQQLHDLIDLVAESR GLYS >gi|227860895|gb|ACLH01000025.1| GENE 4 2651 - 3868 925 405 aa, chain + ## HITS:1 COG:Cgl2883_1 KEGG:ns NR:ns ## COG: Cgl2883_1 COG1432 # Protein_GI_number: 19554133 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 44 171 1 128 128 221 78.0 2e-57 MLERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSSLGSMIENQVGNRIHRQYWYD GIPDTGPHRYQRALRVCDGVQLRTGQLIEWGERRTQKAVDTRLVADMIVSAMKGQVTDFV LVSGDADMIPGVQEAVNNGVRVHLYGFGWDSMSSALRHACDSTTILDPREDFADAMELEV LEGPLPPTIREPQNSEDVGEEVSDAASELAPECEEPTEAQAAFPSAPKPGPATPSAAAQD VAATAAHPESAAPSVPAEDEEPSQPGTAAQESADEEPEAGTDAPKPAPKPAAPKPSMMAP RRKLRSKYVPLPEEVWSSAGFQSPFDVGQQYASWWFDNAASADQRDQAHLLSGGGLPPEI DRPLLQFACETLHEYTLTETQRVNLRDGFHSGIRGVLINIRRQDS >gi|227860895|gb|ACLH01000025.1| GENE 5 3975 - 4790 1073 271 aa, chain - ## HITS:1 COG:Cgl2884 KEGG:ns NR:ns ## COG: Cgl2884 COG1842 # Protein_GI_number: 19554134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Corynebacterium glutamicum # 1 234 1 238 291 159 57.0 4e-39 MANPFSKGWKYVMASFDQKIDENADPKVQIQQAVEGAKEQHRQISEHAAEIIGRKTQLEM QLNRLVKTQKDYQDQTRRALELADASEDPQKAAEYNQAAEVVASQLVAVENELANLKSQH EAASQAAEQAKAQQQQSEARLKEQLAQVDQLLSQADQAAMQEKNAEALDSMNELKPDDST PTLDSVRAKIEKRYADALGAQELHQAAGGSRIQEISAAGHDMAAASRLDEIRAEMAKNKE IEGSPFASDQALEAGTETGAGSESDTAEGKQ >gi|227860895|gb|ACLH01000025.1| GENE 6 4948 - 5313 525 121 aa, chain - ## HITS:1 COG:Cgl2917 KEGG:ns NR:ns ## COG: Cgl2917 COG0526 # Protein_GI_number: 19554167 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 120 1 120 124 175 71.0 2e-44 MATIDITEDTFQETISGDGITLVDAWAEWCGPCKRFGPVFEKASEEHPDATFAKLDTEAN QELSAKLQIQSIPTLMVFRDGILVFREAGALPPAALEDLIGQVKALDMDEVRAQVESQKA E >gi|227860895|gb|ACLH01000025.1| GENE 7 5461 - 5661 317 66 aa, chain + ## HITS:1 COG:no KEGG:Tbis_3354 NR:ns ## KEGG: Tbis_3354 # Name: not_defined # Def: heavy metal transport/detoxification protein # Organism: T.bispora # Pathway: not_defined # 1 66 1 66 66 64 65.0 2e-09 MSTTTYTVTGMTCGHCELSVKEEISEISGVTDVTADHTTGAVTVTGEGFSDEQVAAAVAE AGYELA >gi|227860895|gb|ACLH01000025.1| GENE 8 5667 - 7838 2012 723 aa, chain + ## HITS:1 COG:Cgl0382 KEGG:ns NR:ns ## COG: Cgl0382 COG2217 # Protein_GI_number: 19551632 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Corynebacterium glutamicum # 7 719 19 750 755 802 62.0 0 MTTSLTLGITGMTCTSCSSRVERKLNKLDNVEATVNFATESASVSYDPATTTPADLIDVV EGAGYGAFTMDGEGEEPASTAEDARESEASDILQRTLLSAALSLPVMLLSMVPALQFQHW QWACLMLTTLVYVIGGAPFHRATWANLKHGAATMDTLITLGTTAAFGWSLYALFFGDAGM PGMTMHMTLRSNDAQMDHIYLESVGMVITFLLLGRWFELKAKGRSSEALTTLLTMGAKEA TVLRDGTETRIPASELHVGDVFVVRPGEKIATDGVVLSGHSAVDESLLTGESMPVEVSPG STVTGATINASGRLEVRATRVGSDTVLAQMGALVTAAQTSKAPVQRLADRIAAVFVPIVI GIALLALVAHLLFGGIAPAFVAAVSVLIIACPCAMGLATPTAILVGTGRGAELGILIKGP EILESTRQIDTIVLDKTGTITEGQMSVGAIQSTAGHTQQDVLRLAAAAEQGSEHPIARAI RTAYDGELPTAEDFHELPGQGIEATIEGAHVRVGRPPAGYEGTGTQVGVYVDDTLAGSIE LQDRIKESSAAAIAAMHKLGLTPHLLTGDNAGAARAVARAVGIDDANVTAEVMPADKVDT IARLQEQGRTVAMVGDGVNDAAALAQADLGIAMGAGADVAIEASDITVMNNDLRSVAEAV RLARSTLRIIKGNLFWAFAYNIILLPVAAFGLLNPLLAGLAMALSSVFVVTNSLRLKSFT PEE >gi|227860895|gb|ACLH01000025.1| GENE 9 7850 - 9184 1336 444 aa, chain + ## HITS:1 COG:Cgl2919 KEGG:ns NR:ns ## COG: Cgl2919 COG0477 # Protein_GI_number: 19554169 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 8 443 2 438 439 541 72.0 1e-154 MNRLDHRSISRTERLDRLPVTGKHKRLLFGSGIGWALDAMDVGLISFIMAALAVHWGITP TQSSWLASVGFIGMALGATFGGLLADKFGRRHIFALTLLVYGLATGASALATGLTLLIIL RFFIGLGLGAELPVASTLISEFAPLKVRGRMVVLLEAFWAVGWILAAVIGTFVVGASESG WRWALALGMVPALYALYVRLHLPESVRFLESKGRHEEAEEIVASFEAEVDEADIDRTTPA PTYSEEDVTATSIWSKSLRGRTLALWTIWFCVNLSYYGAFIWIPSLLVADGFSLVKSFSF TLIITLAQLPGYAAAGWLIEVWGRRSTLAIFLVGSALSAGFFGFANTEAMIILAGCLLSF FNLGAWGALYAIGPELYPTALRGRGTGAAAGFGRLASILAPLIVPPLIAVAGTGSLFALF AAAFGLAAVAALTLPEFKGRTLAQ >gi|227860895|gb|ACLH01000025.1| GENE 10 9174 - 9677 328 167 aa, chain + ## HITS:1 COG:Cgl2952 KEGG:ns NR:ns ## COG: Cgl2952 COG4767 # Protein_GI_number: 19554202 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Corynebacterium glutamicum # 5 167 4 175 190 158 53.0 5e-39 MLNRVALGAWIAVMAALTTLKPFYQIGYLWKPENQRVRDLRLVPLDEFSGGTWFGPLFEY AGNTAFFIPFGMLVFSMCRSIKATAAWGFALSLALETVQYAFTLGRTDIDDLIFNTIGVL IGAAFARLCGERFFPVWRWLALAAAAVFLVLVILGPRLGDPNAVVDL >gi|227860895|gb|ACLH01000025.1| GENE 11 9679 - 11103 1589 474 aa, chain - ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 4 474 8 510 510 633 67.0 0 MTNASFDDDQVPPPPEPVEEEPRRSYRQEEPKRYGEFRQPPADREAEQGVLGAMLLSPNT VMEVIEELEPEDFYYPAHTLIYQAMIDLYAAGTDIDAVIVAARLDRYNNLERVGGAPYLH TLLATVPTAANARYYAEIVAEKAVLRKLVDAGTRVVQLGFQGSEDMEIESVLDRAQQEVF AVAQKKTTEDYRALSDLIDPTIDELAALQQNGVESGVPTGFIDLDNLTNGLRAGQMIIVA ARPGVGKSTLAMDFMRSASLQHNKTSVVFSLEMSASEIVMRLLSAEAEVKLSDMRGGRVS TEDWAKIDDTLNRIQDAPLFIDDSPNLTMMEIRSKARRLKQQHGLDLIVLDYMQLMSSGK KVESRQQEVSEFSRQLKLLAKELEVPLIAISQLNRGPESRTDKKPQLADLRESGSLEQDA DMVMLLYRPDSQDRDDPRAGEADIILAKHRGGPIDTVKVAHQLHYSKFVNMAHG >gi|227860895|gb|ACLH01000025.1| GENE 12 11748 - 12200 735 150 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227834260|ref|YP_002835967.1| 50S ribosomal protein L9 [Corynebacterium aurimucosum ATCC 700975] # 1 150 1 150 150 287 100 5e-77 MKLILTAAVENLGAPGEIVEVKDGYGRNYLLPRGLAIVATRGAEKQIEGIKRAQEARAIR DLDHAREIRTQLEELKDVNVPVKTSESGKLFGSVSAEDIVNAVAAAGGPKLDKRIVVLPK GLVKKTGNYQVELKLHADVIGKVNFSVVAA >gi|227860895|gb|ACLH01000025.1| GENE 13 12247 - 12837 831 196 aa, chain - ## HITS:1 COG:Cgl2925 KEGG:ns NR:ns ## COG: Cgl2925 COG0629 # Protein_GI_number: 19554175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Corynebacterium glutamicum # 1 196 1 225 225 200 60.0 1e-51 MAQGDTNITVVGNIVADPELRFTPAGAAVANFRVASTPRRYNQQTSQWEDGEAMFLTCNV WRQAAENVAETLTKGMRVIVTGRLRQRSYQTREGENRTVFEIEVDEVGPSLRYATAQVNR KSGNGGGNYGGGQQQGGANYGGGNQGGFSGNQGGFSGNQSQSSAPQQSQQSAPSNDPWNS APQAGSFGGADAEPPF >gi|227860895|gb|ACLH01000025.1| GENE 14 12889 - 13188 487 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227834262|ref|YP_002835969.1| 30S ribosomal protein S6 [Corynebacterium aurimucosum ATCC 700975] # 4 99 1 96 96 192 98 3e-48 MRSVRHYEVMIILDPNQDERTVTPSLDKFLEAIRKDGGKVEKVDVWGKRRLAYPINKKEE GIYAVVELECESHSVLELDRRLNLNDSILRTKVLRTDSK >gi|227860895|gb|ACLH01000025.1| GENE 15 13327 - 13509 91 60 aa, chain - ## HITS:1 COG:no KEGG:cauri_2441 NR:ns ## KEGG: cauri_2441 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 60 1 60 60 78 100.0 7e-14 MTMTILGIISITLGFICVLSAYYLFQRSQDRTWPIVLGLLALLFLTVIPAGSAIFVAATH >gi|227860895|gb|ACLH01000025.1| GENE 16 13506 - 14909 1352 467 aa, chain - ## HITS:1 COG:Cgl2929 KEGG:ns NR:ns ## COG: Cgl2929 COG5650 # Protein_GI_number: 19554179 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 14 466 18 474 486 521 57.0 1e-148 MSHHTTSQIVSLSSESMTRNAVDALGGPTGRFARSAYSGWWTPLRVAITLAWTFLAFGFL SKATCAGSRRGEDGLISLNWDGNRQYTAFCYNDIVPLYGGRGLDQPGFPYAYSWVEGDLT RYMEYPVLAGLFQGAVGWLARTTYPAVEWLGMADVSWYFGLTAFIMSLVWVGTVVMVFQL TGNRAWDTILMAASPLVVIHAFTNWDIPSVAFMAGALLAVTKRKNWLAGILIGLGTAFKL WPLFILGAFLVLAIRHKRWAPFFKMFAATAVTWLVVNLPVALAYPEAWGEFFRLNQERGA DWTTIYALLSRVTGVGFEADFLNTFSLVAFLACCAAIAIMGLKTPRAPRVAEMIYLIIMA FLIFNKVWSPQYSLWLVVPALLALPRWRLIFSWALADALLWPILTWHMLGAENKGLPHEM LDIAVITRDGFIIAIGVLIIRQMWGKSEDKVRAAHGGRDPLAGDFAR >gi|227860895|gb|ACLH01000025.1| GENE 17 14925 - 17012 2358 695 aa, chain - ## HITS:1 COG:Cgl2930 KEGG:ns NR:ns ## COG: Cgl2930 COG0744 # Protein_GI_number: 19554180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 3 665 41 697 720 731 60.0 0 MGIPALLFGFAYTQYDVPEPEELQPSQISTIVAGDGETQLAKLVPPEGNRRQVTLDEIPD YVEGSVLAAEDREFWTNSGFSFTGLGRAVLGKLTGDSTAGGGSTITQQYVKNTLVGDEYS YVRKIRELIYSVKMTNEWSKEEILNAYLNTVYFGRNAYGIEAASNAYFNKDAKDLTVEEG AMLAGLIQSPSVLDPWVDEERSQARWNYVMDGLVEMGELDSAERSQMAFPETRDPGEYSA YTEAPGAYGHIKNQVTGELARVGITEDQLATGGLKVTTTIDMTVQNASTDAAHEQLAVLQ EDARAAAVTIDPATGAVRGYFGGDDSNGWDYANSPLQTGSVFKIMALAAALQQGIDLNTY YSSAPYQLPGSQTVTNVGGGCGSCSIAEALKNSYNTSFLRLQDDLENKMQDTADMAHALG VARSLPGIEKTLTENGGTPYEGVVLGQYQSRPLDMATAMATLTNQGVWHQPHFVQKVENA AGEVLYENPTDGGERRVSANVANNVISAMQPIAAWSNGALAGGRPSASKTGTTQLGDTGT NKDAWMVGSTPQLATAVWVGTADNTSAIFNQWGGIMYGSDAPTKIWKSILDTSLANVEQQ SFPQAYPIHYGVGSWGSGYVYDPSQSTTWNQAPASPENEGDEEAPAEDGENHDEGRGETP GRPAQPEQPAQPAEPEVPSLDDILNGDGLDQLLGQ >gi|227860895|gb|ACLH01000025.1| GENE 18 17005 - 17226 65 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPTKTNKTVSTIHGQRRLELDECRALREGLFLLLPDFRPEVSFSVTDPCPHQSCTETVNI CSLPARTGKPKLP >gi|227860895|gb|ACLH01000025.1| GENE 19 17748 - 18227 594 159 aa, chain + ## HITS:1 COG:Cgl2932 KEGG:ns NR:ns ## COG: Cgl2932 COG1846 # Protein_GI_number: 19554182 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 10 152 5 147 157 112 46.0 3e-25 MSEETIESPVPYEDALEVARQIQPALNKLMLIFQRTTEGTSLTTSQVSIMNQLRMRGPSR VSTIAQAELIRMPTASNALYQLERQGFVERHRDEKDRRGVLVALTQLGESELTIVSRQRA AALAEILRWLDPEDIKDADTLVNLISKLADVYRPIMEGK >gi|227860895|gb|ACLH01000025.1| GENE 20 18311 - 19294 715 327 aa, chain + ## HITS:1 COG:Cgl2933 KEGG:ns NR:ns ## COG: Cgl2933 COG0589 # Protein_GI_number: 19554183 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 21 319 5 312 314 269 46.0 7e-72 MAKNSSHPAEGPCSPDDQLPPLRVLVSWSPSSTGTEAIEFAAWLARSTSVRIRVVSTISQ PLTVTSLSKLSGSYKKWFKKERATCERAVKQALHAAGVDKDQLDKNVSVLLAGPSRPQLL EQAAEDFKASVILLGANQSAPKGRFFSGSTADALLHYSPLPVGLIPRGIKLSKHGVTRIN FAFTDLGSADDPALLHAACIAQRGGIPLRILAFSAKGLVDVPLEYSPTFPSDAPNWREHS LSLLDRAHDFIADAYPELSVTTAIGSGHGWSGAVDSLKWKKGDLLCLGSSPMGPIERVFI GSTATELLPHLGVPVLVCPSTYDKEAR >gi|227860895|gb|ACLH01000025.1| GENE 21 19306 - 19788 568 160 aa, chain + ## HITS:1 COG:no KEGG:cauri_2447 NR:ns ## KEGG: cauri_2447 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 160 1 160 160 320 100.0 2e-86 MAAEHPENDLTSDADYTNLPRPEPRNFDELADEPDPLAVAEANRRSSRQALCFMILILVG SVLYALLLAGIFKVAGTTTDCLQAEYAAWLCTRTQRTVFATTTLIIPFIGMIGCAVIMVR KLKAYVRWRGWMAIFWVMAGNFMIWCINDIQILLAPVLEN >gi|227860895|gb|ACLH01000025.1| GENE 22 19795 - 20724 1136 309 aa, chain - ## HITS:1 COG:Cgl2936 KEGG:ns NR:ns ## COG: Cgl2936 COG1054 # Protein_GI_number: 19554186 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Corynebacterium glutamicum # 1 308 1 303 312 489 73.0 1e-138 MTIGKILLYYCFTPIEDPTAIMLWQRSLCEKLGLKGRILISEHGINGTVGGDMDACKRYV RETREYPGFKKMEFKWSEGGAEDFPRLSVKVRDEIVAFGAPGELKVDENGVIGGGVHLKP EEVNKLVEERGEEVVFFDGRNAMEAEIGKFKNAVVPDVRTTHDFIAELESGKYDWMKDKP VVSYCTGGIRCEILSALMKNRGFNEVYQIDGGIVRYGEKYGNDGLWEGSMYVFDKRMHHE FGQGLEDPGFIQLGHCVHCGKGTNTFHNCINEDTCRKQVLICDDCIQHVETQHCGRPDCA EVAASQAQA >gi|227860895|gb|ACLH01000025.1| GENE 23 20947 - 22443 1910 498 aa, chain - ## HITS:1 COG:Cgl2942 KEGG:ns NR:ns ## COG: Cgl2942 COG4868 # Protein_GI_number: 19554192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 498 2 495 495 699 70.0 0 MGRAIGFDREKYIELQSEHINARRKEIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAM LERIKDDVEILVCINAKDIERQKMRGDLGILYEDDVLRLVDVFRDRGFLVNNIVMTQLED GNSQAEAFIERLERLGLTVARHRIIPGYPANIDLIVSEDGLGKNDYVETTRDLVVVTAPG PGSGKLATALSQVYHENLRGVPAGYAKFETFPIWNLPLDHPVNLAYEAATVDLNDANVID HFHLSAHGESTVNYNRDVEAFPLLKSLLERLTGTVPYQSPTDMGVNMVGFCITDDEVCRE ASQQEIIRRYFKTLVEEARNGLDTTQSERAAVVMAKAGIKSTDRPVVLPARQKAEETQGP AAALQLHDGTIITGRTSPLLGCSAAALLNALKHLAGIDDELHLLSPESIEPIQTLKTKHL GSQNPRLHTDEVLIALSVSAAKDENARRALDALKELQGCDVHTTTILGSVDEGIFRNLGV LVTSDPVFARKSALYQKR >gi|227860895|gb|ACLH01000025.1| GENE 24 22521 - 23336 783 271 aa, chain + ## HITS:1 COG:Cgl2944 KEGG:ns NR:ns ## COG: Cgl2944 COG0266 # Protein_GI_number: 19554194 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Corynebacterium glutamicum # 1 268 1 268 269 356 61.0 3e-98 MPEGHVIHRLARTLNADFRNKPLAVSSPQGRFATEAALVDASPLSLAEAFGKHLFVHFDT DNPRHVIYIHLGLIGSLRFEPSADVWGQIRLRIDNGTTAANLRGPQFCTLITEEEYQAKV AKVGQDPLRKDADPDTLWDRVHASRRSIGAMLMDQGLFAGVGNIYRAEALFRQELSPFIP GNQLDRAEFDAIWSDLVDLMDYGVEHGRIDTVRPAHTPEAMGREPRKDDHGGEVYVYRRA GLPCHVCCTEIREQVMQGRNLFWCPTCQPAR >gi|227860895|gb|ACLH01000025.1| GENE 25 23347 - 24945 360 532 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 27 466 34 455 500 143 29 2e-33 MRPAYTVAAVRAAEKRLLKQQSHEEQLMKLAAAAVAEAASVMLEERPGAVLILAGSGGNG GDGLYAGAALASRGVSVHALVPERCHEEALAAFRSAGGAVLSADALPSGSALVIDAIAGL GSARGLSGTALSLYREATAAGATVLAVDMPTGVDADTGVCAADAVRADITVTFGSPRLGH ALAAECGQVVVSDLFLPGAPSFAATLAELDEPAAFIAHEPSVPTPFTWQSGELDLPDGRA SRPWPVGCTGPIVDPTPGARSDKYSGGVVALAAGSDIYPGAGILCTTAAVRATPSMVRFI GDNSITCLLPELVCHPDVSSAGQAQAWVVGPGRGTDAAAATELRKVLAQGLPTVIDADAL TLLARNTSLRQKATEHPMTILTPHEGEFSRLYEATFGSAPDASAGWAAALHELAEELHSI ILLKGRLTRVTAPGQPIYSFNAGHSFAATPGSGDALSGILGAVVAQLFASPSTETGADPT ARTITEVLHAGAIHAHAAAIAAETPDGFAPCSASQIAAAIPQAIARLVNAKR >gi|227860895|gb|ACLH01000025.1| GENE 26 25107 - 25931 937 274 aa, chain - ## HITS:1 COG:Cgl1060 KEGG:ns NR:ns ## COG: Cgl1060 COG5522 # Protein_GI_number: 19552310 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 10 230 3 215 241 122 35.0 7e-28 MIRPRKPRVSPTDYPRMQQWTALHALMLSITVVACGVFIVAARRIKGTSRETFIRRMVGW ALLVAGTAWTVISLDPKQFDIRESLPLHLCDVLRPILALGLITGNEHALTLTYFWGIILN PQAIITPDVFYYFLPRWLRFGTYWFFHIVALAVPLVLTFGLGYRPTWKGYRFAVKVTPVW MATAMAVNAKTDGNYGFLNHAPGSPSIINLLGPWPGYIAAETLAVAAAWAGMTWPWENTS LRRGTVAVGPRGLMRKSVGTASGILRRATVRFGK >gi|227860895|gb|ACLH01000025.1| GENE 27 25985 - 26665 276 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 220 260 500 563 110 34 9e-24 SARRPRRQCLMTTTASSPALSLRDIVVTYPDGQSRTTALDGVSLDIKPGELTAVIGESGS GKSTLLSVAAGLIEPDSGTVEMHGTRGLIFQQANLLAALTAREQLLIIDHMEGRKPRGDR ADELLSFVGLEGFGNRRMNQLSGGQRQRVNIARALMGQPSVLLADEPTSALDSKLSREIA KLLRGVTDDFDTATLFITHDRRLLDYADTVVEVKDGKLSEYSELAA >gi|227860895|gb|ACLH01000025.1| GENE 28 26635 - 27630 1254 331 aa, chain - ## HITS:1 COG:lin2726 KEGG:ns NR:ns ## COG: lin2726 COG0577 # Protein_GI_number: 16801787 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 328 1 359 362 117 27.0 4e-26 MFLALREIVTARGRFFLIGGVVALITLLLVMLSGLTQGLSKQNTSALEALGEQNPYVTFS TEDPSFTESEIFAEDVPTSGIPLGTSQTKLEGHGGVAVIGLPAGTQIPGSGTVIPEEGMV LSQSIDDALNAPSRGTLGGVDLDVNAVVEDEYYSHSPVVWVSTETWQKVSHSPEDMVGVA VLSHEPTDTSVSMSKALSGLPAYSSERGSLLTMQAFLYGISALVTIAFLSIWTIQRTRDL SILRALGASVKYLLKDAIAQAAIILAIGVGVGALVGWLLGLAAQGAVPFEVSAMTVIVPA LGIWLLGIAGAFLATRRVSKINPLDALGGNA >gi|227860895|gb|ACLH01000025.1| GENE 29 27743 - 28912 1050 389 aa, chain + ## HITS:1 COG:Cgl2871 KEGG:ns NR:ns ## COG: Cgl2871 COG4585 # Protein_GI_number: 19554121 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 12 376 37 411 444 117 31.0 5e-26 MMMSNKLWTVGLHAMFGFLLVFGVLRAWADERLDARVLGLSIALAVVYTCFVIVGSRTIT RPVPTTLWLAALCLLWIGLMVHAQDFMWLEFPLVFVFIHALPFWPGIVASVILWAVAAFV PAWIHPQFWTAAAAIGPFIGTCFAVAVYHAARRVQAEAAHHEAVAKQLRETQEELAASEH QAGRLEERERLSREIHDTVAQGLSSIVLLSRAAKNTSTQQDVTEQLALIEKVAQDNLAEA RRFVKELAAPASSIDKELRTLVDELQAQAKGLGLRTYFGLKLTGSADVPTEFSHVILRAA REGLTNVMKHADADRAVVTLGSFKDEITLDVADDGRGIEGPRGFGLTGLEQRVRSVGGSV QVESSPAGTALAVRIPTGGSSNGQRDAHR >gi|227860895|gb|ACLH01000025.1| GENE 30 28887 - 29507 773 206 aa, chain + ## HITS:1 COG:Cgl2870 KEGG:ns NR:ns ## COG: Cgl2870 COG2197 # Protein_GI_number: 19554120 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 1 205 1 212 212 171 50.0 8e-43 MVNVMLIDDHPVVRAGLRAILNAFPDIEVVLEGSDGSAVEKLADADGPHIDVVVCDIQMP DVDGIAATRRVRELDGPPVLILTTYDTQADILAAVEAGALGYLLKDAPEDTLHTAVLDTA AGKRTLAPEVTNLLAERLAQPETALSPRELEILQALSTGASNKQIAQRLFISEATVKTHL IHVYQKLGVETRTAAVSAARERKLIQ >gi|227860895|gb|ACLH01000025.1| GENE 31 29508 - 30518 945 336 aa, chain + ## HITS:1 COG:BH3677 KEGG:ns NR:ns ## COG: BH3677 COG2072 # Protein_GI_number: 15616239 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Bacillus halodurans # 1 317 1 334 350 149 32.0 1e-35 MHTYDCIVVGGGQSGLATGYYLRRQKLDFLVLDANASPGGAWQHVWDSLTLFSDAQSSTL PGWPMPSYPGFPPASHVVDYLTRYEQRYDLPVRHGVAVERVLDDAPFFRLLTTHGEFRAR TVVAATGTWSAPFIPFYPGEFQGRQWHTANYPGCGPFLERGHNNPVAVVGAGNSGAQIAA ELALAGVDTTWFTAHPPRWMPDDVDGRVLFTRNRQRMLAKLRGEPDPGPETELGDIVMVP PVLKARDSGILNATGMFSSLEELNREGFSDLIWATGFRPALRPFPGLLAEGKPTVEGFFP VGYGSWTGPGSATITGVSPYARQVAGDVAKLVRTPS >gi|227860895|gb|ACLH01000025.1| GENE 32 30522 - 31094 506 190 aa, chain - ## HITS:1 COG:Cgl2953 KEGG:ns NR:ns ## COG: Cgl2953 COG4767 # Protein_GI_number: 19554203 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Corynebacterium glutamicum # 45 159 58 171 203 95 40.0 7e-20 MTGIEAQHSRNRLRPAPDPYPHLRRDSFLVTALSLMVVMLATVGKPFMDIPGVVDGSAHA VRQVNTQLFGGFENASVWYGAWTDLVGNIALFMPLGAALYVVGRNLSGIKWGLGGAMLIG LMASLCIESAQYIFALGFSDVDDLLYNTVGSVLGAVLMARLRREGQTKVLRRLGFLLALA AVVLLAMVTL >gi|227860895|gb|ACLH01000025.1| GENE 33 31181 - 32146 1102 321 aa, chain + ## HITS:1 COG:Cgl2485 KEGG:ns NR:ns ## COG: Cgl2485 COG0604 # Protein_GI_number: 19553735 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 16 321 32 339 340 322 55.0 9e-88 MSTLIVTRTDSGVTHSFQEQPLLGEGDTLVDVQFSSLNYKDAMALEGDKGVMRIDPLVPG IDAVGTVAETSDSRLSPGQLVVACGDGLGEFRHGGYTTRQRVNAEATIPVPQRFSAHDAA AIGTAGYTAAICVNQLHTHGTTQGHILVTGATGGVGSVAVQLLKSAGYEVTAVTGRVDSQ SDYLTALGADHVLDRAALSETGRPLQKALYDGAIDTAGSTVLANVLAQVRWGGVVAATGM AAGPDLPASVLPFILRGIVLAGGNSVDAPREVREAAWQLLDEHLDLNMLNSITETVPLSD VATAATELRAGSRHGRTVVEI >gi|227860895|gb|ACLH01000025.1| GENE 34 32177 - 32341 310 54 aa, chain - ## HITS:1 COG:no KEGG:cauri_2459 NR:ns ## KEGG: cauri_2459 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 54 1 54 54 93 100.0 2e-18 MTTSAILLFILFVVVIWGGLVVSSIWLARSDDDTTGELGNAPGTGDESLSHRVH >gi|227860895|gb|ACLH01000025.1| GENE 35 32367 - 33986 2233 539 aa, chain - ## HITS:1 COG:Cgl1001 KEGG:ns NR:ns ## COG: Cgl1001 COG0733 # Protein_GI_number: 19552251 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Corynebacterium glutamicum # 2 513 7 518 563 551 60.0 1e-156 MTTLTTHKTRSTRDTFNTRFVFLMAAIGSAVGLGNIWRFPYVAYENGGGAFLIPYMVALL TAGIPILWFDLAIGHRFRGSAPLAFRRISSRWEGIGWFKVGVNFFIAIYYAAIIAWAALY TIKSVTQAWGDDPAEYFMGDFLQAEPEATYSGHIVPSILGVMILVWIVCIATLATSINEG IGKLTSIFLPVLAVMFIILVIRAFFLDGAAEGLNAFFTPDWSVLSNPSVWIAAYGQIFFS LSIGFGIMITYASYLKPRTNLTNTGLVTAFANSSFEVLAGIGVFATLGYMAAQQGVAVDE VASSGIGLAFIAFPTIINLMPLGGLFGVLFFGSLFLAGVTSLISIMEVVVSAVADKFNIS RRVSAITVGGAMAVLSCFLFSTSSGLVTLDIMDKFTNNLGIVFGAICALVVVGWVTGRRR EIQQHLNAVSQFKVGGFWQFLTFIATPLLLVYFLVNEIITIAREGYEGYSSTQIGLFGWA ALGIILLASFLMPLVAFRGNKYLDGMETSDYGVPVGGRPAGTPNPLATANTATQTADDK >gi|227860895|gb|ACLH01000025.1| GENE 36 34329 - 34914 696 195 aa, chain + ## HITS:1 COG:Rv0785 KEGG:ns NR:ns ## COG: Rv0785 COG3573 # Protein_GI_number: 15607925 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Mycobacterium tuberculosis H37Rv # 3 192 16 197 566 195 50.0 4e-50 MKETNSVTGSVIIVGSGLAGMVAGYEALKGGKHVIFLEQENRNNLGGQAFWSLGGLFYVD SPEQKMMRVKDSEELAWRDWANSADYDPVTEDDRHDFWGAKWGREYVRFAANEKRGYLKS LGLNVLPTIGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREPLLKAEEQGQVEFHF RHRVDELVVENDDAG Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:14:23 2011 Seq name: gi|227860894|gb|ACLH01000026.1| Corynebacterium aurimucosum ATCC 700975 contig00081, whole genome shotgun sequence Length of sequence - 2379 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 67 - 1020 1268 ## COG3573 Predicted oxidoreductase 2 1 Op 2 . + CDS 1048 - 2331 1343 ## cauri_2462 hypothetical protein Predicted protein(s) >gi|227860894|gb|ACLH01000026.1| GENE 1 67 - 1020 1268 317 aa, chain + ## HITS:1 COG:mll5046 KEGG:ns NR:ns ## COG: mll5046 COG3573 # Protein_GI_number: 13474209 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Mesorhizobium loti # 2 316 237 549 552 340 57.0 3e-93 MWPTERWGECPNELVTGVPAHVDGRGIDIAQQAGASVVNTDRMWAYTEGMTNWNSIWPGH GIRIIPGPSALWIDAEGNRLPTNLFPGTDNLAALAHIGQTGHGYSWFVLNKAIVDKEFIF SGSEQNPDLTDKEFKKLAGKLGPGTHVAVKAFMDNGIDWVVEDNLEDLVAGMNQISPEGS PTIEVTQLKKVLEDRDSQLDNPFSKDAQVNYLRVARGFLGDKLIRVAPPHRILDESKGPL IAVRLKFLTRKTLGGLETNLDGQCLNPDGTVLPGLYACGEASGFGGGGMHGKNALEGTFL GGCIHSGKRVGEALARG >gi|227860894|gb|ACLH01000026.1| GENE 2 1048 - 2331 1343 427 aa, chain + ## HITS:1 COG:no KEGG:cauri_2462 NR:ns ## KEGG: cauri_2462 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 427 1 427 427 848 100.0 0 MNLARNVRIDVENPFFTTSRFVAAPAELTVGEMMIIVHAALGLEPSHPGILVGEEGTPID VLSIIDQDFFETFREVAHYHPSDGAWNISISVADSSRVVMGLPALIAGEGPDLMSELGSA EAMFKVVLDVQATMAYMAVPTDSMERIFALFPNYTLDQIHQRLTTFFPPAVAQRLATMGT EAANLEGGTKPALPGDLPLDPFRSTPFEDIPVPSSEMLEEWRADIHAAYPELRPDYELPA LDAATAAHVGQRIREYLEVIEEFPRLTGAGYLKQAAVARLKEGLNSPNDFDEVKREDYHQ PLLNLRGFLTDLDWIKTTTTDIKLTKYGRKAMSDPLWATQVVLNNIPYAYAEPEGIPQLS FELVHLFRGEWEFNPEYDYTHAITRDLLFTLGVIEDDSTFPDITDGCEGFLGAIITKVRQ ELNQELD Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:14:36 2011 Seq name: gi|227860893|gb|ACLH01000027.1| Corynebacterium aurimucosum ATCC 700975 contig00082, whole genome shotgun sequence Length of sequence - 20458 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 9, operones - 4 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 470 - 862 487 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 864 - 926 4.5 2 2 Op 1 . - CDS 931 - 3780 4352 ## COG0495 Leucyl-tRNA synthetase 3 2 Op 2 . - CDS 3864 - 7589 2865 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 7633 - 7692 2.6 4 3 Tu 1 . + CDS 7752 - 8015 110 ## 5 4 Op 1 . - CDS 8071 - 8607 330 ## cauri_2471 putative excisionase 6 4 Op 2 . - CDS 8667 - 9608 689 ## COG1715 Restriction endonuclease 7 4 Op 3 27/0.000 - CDS 9608 - 10306 158 ## COG0732 Restriction endonuclease S subunits - Prom 10441 - 10500 1.9 8 4 Op 4 . - CDS 10746 - 12347 1678 ## COG0286 Type I restriction-modification system methyltransferase subunit 9 5 Tu 1 . + CDS 12319 - 13083 883 ## cauri_2475 hypothetical protein + Term 13103 - 13144 9.1 - Term 13423 - 13459 -0.9 10 6 Op 1 . - CDS 13500 - 14234 331 ## cauri_2476 hypothetical protein 11 6 Op 2 . - CDS 14238 - 14819 107 ## gi|227506253|ref|ZP_03936302.1| conserved hypothetical protein - Prom 14957 - 15016 1.7 + Prom 14897 - 14956 1.5 12 7 Op 1 . + CDS 15073 - 17604 2530 ## cauri_2477 hypothetical protein 13 7 Op 2 . + CDS 17634 - 18284 658 ## COG2258 Uncharacterized protein conserved in bacteria 14 8 Tu 1 . - CDS 18259 - 19674 492 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Prom 19850 - 19909 3.2 15 9 Tu 1 . + CDS 20173 - 20458 237 ## cauri_2480 hypothetical protein Predicted protein(s) >gi|227860893|gb|ACLH01000027.1| GENE 1 470 - 862 487 130 aa, chain + ## HITS:1 COG:SP0892 KEGG:ns NR:ns ## COG: SP0892 COG4096 # Protein_GI_number: 15900775 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pneumoniae TIGR4 # 19 129 970 1091 1091 57 27.0 6e-09 MDRDTRKAAVMDLADELGNLVAVSPALEEQLGVGLPRFVRTIIGLDESAARSAFADMMDG ARLNSVQLAFMNQIIGGLVHNGIVTVAELFEAPYDDYGSPFDVFDGNVATIHDIKERLER IEHSVDEVSS >gi|227860893|gb|ACLH01000027.1| GENE 2 931 - 3780 4352 949 aa, chain - ## HITS:1 COG:Cgl2961 KEGG:ns NR:ns ## COG: Cgl2961 COG0495 # Protein_GI_number: 19554211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 949 1 952 952 1532 78.0 0 MTNPSDNTTHRYTPELAAQIESAWQQYWKDNGTFNAPNPVGPLAEEGKELPAEKMNIQDM FPYPSGAGLHVGHPLGYIATDTYARFNRMLGKNVLHTLGYDAFGLPAEQYAIQTGTHPRT TTEANINNMRRQLGMLGLGHDPRRSVASTDPEFYKWTQWIFLQIYNSWFDEEQQKARPIS ELIKELEVGKRTTKDGRYYADLTKEEQRQALDEFRLVYLSNSTVNWCPGLGTVLANEEVT AEGKSERGNFPVFRKNLRQWMMRITAYSDRLLDDLELLDWPEKVKSMQRNWIGRSRGAEV SFHAEGYNIDVFTTRPDTLFGAEYVVLAPEHELVDALLSPIPYEDDVDKRWTFGHDDPKE AVEAYRASIAAKSDLERQENKEKTGVFLGTYATNPVNGKQIPIFIADYVLTGYGTGAIMA VPAHDTRDYEFATVFGLPITEVVAGGDITKEAYTESGQAVNSANDSLDINGMSKDEAIAT IIPWLEEQGVGREKIQYKLRDWLFARQRYWGEPFPIVYDEAGQAYPLPESMLPIELPEVE DYKPVSFDPDDADSSPQPPLAKAREWVEVELDLGLGDGPKTYYRDTNVMPQWAGSSWYQL RYIDPTNDEIFCDLENERYWTGPRTEEHGANDPGGVDLYVGGVEHAVLHLLYARFWHKVL FDLGYVSSKEPYRRLYNQGYIQAYAYTDSRGVYVPAAEVEEKDGKFYYNGEEVNQEYGKM GKSLKNSVAPDDICRDYGADTLRVYEMSMGPLDTSRPWATKDVVGAQRFLQRLWRLAIDE NSGELSTTDAELSEDDLKHLNRTIAGVRDDYENLRLNTVVAKLIEYVNYLTKAYPKGAPR AAVEPLAQLVSPVAPHIAEELWKRFGHEGTITYEAFPEFDEKYLVDDEIEVPVQINGKVK ARVMVPADADQATVVGIAKDDERIAELTAGKNVVKEIYVPGRMVNLVVK >gi|227860893|gb|ACLH01000027.1| GENE 3 3864 - 7589 2865 1241 aa, chain - ## HITS:1 COG:MA2418 KEGG:ns NR:ns ## COG: MA2418 COG4096 # Protein_GI_number: 20091249 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Methanosarcina acetivorans str.C2A # 253 1209 151 1106 1146 676 41.0 0 MVTPTPPSHPNTGRNSVQGGPIRSTNFGFVRYVWPTAYEECLKVERFVDADPVISCFYAR KVLERVVNHIWAFRSLGDTRYLSLAEMTRDRGFLQYVKNETMLRKMTILRKSGNDAAHAD DMEGKQAPATSQKARAVVAHLYDLMAWAVRYHSANPKAAPGPQATFDTSLLGQSAADASG IHVAGRSQAQTAAYLKKLAQQDEELKKNRLLLDEAQEAAREAEEKRLREAAQFELKRRSA EVRAKADLADAQEQAEAERAAAQQVEEKLAAKIEALEAKLAEQEAAAAERAGAGAQPDAP LAIGEAETRRQLIDPMLEVAGFSGDSVTRELELHGMPNTSGVGYADYVLWDDDRTPLAVI EAKKSMESMSVGSQQVKLYADCIEREYGIRPVMLCTNGYHIDLIDDAANLPGSGAGYPAR EVEGFPTAQQLRRMIGRRTMRTLLSETPVDTDIAGGGARAYQLEAIRAVTETLEARRRRQ ALLVMATGTGKTRVAVATAKLLRQAGWVGKVLFLADRTALVNQAHKAFVSMYAESTPVNL IKNPEQVGDVYVTTYNTMMNLIGDDGDKPARYGPFDFDLIIVDEAHRSVYNRFKRILEYF DAYVVGLTATPKSEIDHDTYALFEMEDKTPSFEYGLDEAVADGNLVPFKTARQDSLFLRR GMAYDELSPEEQLAWDTSDWGTDEDGGRLDPPGQVSSAEINRYLFNKDTIRKVLKTVVEN GIRVGGDQLGKTIIFARTQRHAELIKQVFDATFPEYSRTGASVITTHTKYAQSALDDFAD PDGDVNIAISVDMLDTGVDVPEVVNLVFFKPVYSPTKFWQMVGRGTRLRPDLFGPGMDKT HFLIFDFCGNVDEFFKGEARESVIGRPRSLSEKLFDARVGLLAQLDKHAKAPEMRAELAD SLHASAASIPLGHIMVRPSDKETLLRYRERSAWDELSEEKAEQLRRHIAHLPLDTMKDSE TAKRFDLVILKLQVGLLDHSPEFAALRERVERMANDLMAVSSTIPMVAERRSFLERALDP EWWNNVTVEDLETIRIGMRSLIQFVPKGKRNAVTLDIQDEMGELTIDDEMPARLPGTGSY PTQLEQRLRELLQEHANDLAMIKLRSARTLNAEDVAALEAMVAQAGGGSGGSTESVDKLR ERMGGDSIPAFIRRLVGLDEAAVREQFADLLSNTSFNAAQIRFIKMLVDVLVHNGGVAYE EIFQPPFDEEGSVIDIFHNKTDVIVDLRKRLERIEATAQAT >gi|227860893|gb|ACLH01000027.1| GENE 4 7752 - 8015 110 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNCELSQSPPITGETVINTDRTQPIARVVPVLHPNSRVQQLVAAGILSHTPAPYSPLTT TAPEPDTTSYLPSKTDVVSLLGREDRV >gi|227860893|gb|ACLH01000027.1| GENE 5 8071 - 8607 330 178 aa, chain - ## HITS:1 COG:no KEGG:cauri_2471 NR:ns ## KEGG: cauri_2471 # Name: not_defined # Def: putative excisionase # Organism: C.aurimucosum # Pathway: not_defined # 1 178 1 178 178 291 100.0 8e-78 MNEVRNHRPHTTVPPQDLEAMLDVSKFLERLEGPPALVGSDGQAVDLPEEALGVLSEAVR AMQQGKAITVAPVDQLLTTQEAADFLGISRPTLVKKLEDGSIAFERTSGGKHRRVRLVDV LQYRDEQRAERRKALRELVSEAQRAGAYSAGTDDADAEDIALSLKGARKEAAEKARRG >gi|227860893|gb|ACLH01000027.1| GENE 6 8667 - 9608 689 313 aa, chain - ## HITS:1 COG:alr7132 KEGG:ns NR:ns ## COG: alr7132 COG1715 # Protein_GI_number: 17233148 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Nostoc sp. PCC 7120 # 1 312 1 302 305 206 40.0 4e-53 MAILKWHGYMVPVLHVLASDGQVFKRSVLIEEAAVRVGVTDEERLETIPSGQPLYENRVG WALTFLKKANAIISPARARFQITDFGRDLLARYPEGMTEKQLRAEIAGTEAELTWRGPSQ GSKAVHKANSDKQSDLPEVESELDPLEQVETGVSRNNELVAGDLLTRLHENEPAFFEQAV LDLLMAMGYGGTQGKATRTQLSNDGGIDGIIDQDALGLSRIYVQAKRYGLDKSIGRPDIQ AFVGALQGAQADRGVFLTTAKFSDRAQEYADAVASRVVLIDGNRLAELMIRYGVGVQVKR TVALVEVDEDYFE >gi|227860893|gb|ACLH01000027.1| GENE 7 9608 - 10306 158 232 aa, chain - ## HITS:1 COG:PAB2150 KEGG:ns NR:ns ## COG: PAB2150 COG0732 # Protein_GI_number: 14520513 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Pyrococcus abyssi # 2 232 172 424 427 90 25.0 2e-18 MVPLPPLDEQRRIAAILDEVESAIVAAKSQLSELSAIPFWMGDRKFELVALSELVDIRSS LVDPTSEPYMDMPHIAPNNLSSGSDDFVGVKSAVEDRVTSGKYAFQAGDILYSKIRPYLN KVSIAAYDGVCSADMYALVPRNRTQTDWIVWQLRSSRFLAYAASSSGRASIPKINRKALG AFKVQIVEPAVLEQFNREQNVKKTIENSVRKKLYLLQELQSSLSTRAFQGEL >gi|227860893|gb|ACLH01000027.1| GENE 8 10746 - 12347 1678 533 aa, chain - ## HITS:1 COG:SP0886 KEGG:ns NR:ns ## COG: SP0886 COG0286 # Protein_GI_number: 15900769 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pneumoniae TIGR4 # 10 529 1 496 497 418 44.0 1e-116 MAATATLKYMITGALKNNVDRIWDTFWSGGISNPVSVIEQFTYLLFIKDLDERQVQIDKR RALGDPTATEDIFDASQQDLRWRNLIEDRDIARRKATIINKVFPFIKEMGGTGFQEHMAN ASFEIESEATLSRVMELIDQLHFSNKDMKGDLYEYMLDKLSTSGTNGQFRTTSHIIELLV ALMEPTPQQRIIDPACGTAGFLVAANDWIAHHHRADLFNKDTRTTFTNEGLTGFDFDKTM VRIAAMNMFMHGFEEPNISYRDSLQQLPTTFDEAFDLVLANPPFAGSLDKDAVDPKLKSV TTAKKTEILFVHRFLQLLKPGGRAAVIVPEGVLFGSTKAHKALRKTLVEDQRLDAVIKLP SGVFKPYSGVSTAVLCFTRTDSGGTDEVWFYDVTADGYSLDDKRTPLLDAPLLGPSPASH IQDLSDPALADDPTPVTLTDEQLKLNNLPDVVARWHSRTTDERERARTDYSFTVPKEEIA QADYDLSMNRYKEIVLEVEETRDPMDIIAEIEELDRDITQGLANLKTMLSEGK >gi|227860893|gb|ACLH01000027.1| GENE 9 12319 - 13083 883 254 aa, chain + ## HITS:1 COG:no KEGG:cauri_2475 NR:ns ## KEGG: cauri_2475 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 95 254 1 160 160 306 99.0 4e-82 MYFRVAVAAIETAIWEGSARVARKDDPSLIPLMDTPVGYRLGSTQSDPFGRLMKRLISLA AACAAAITLSSCSTDSPVPSEASKSAASSTDIQQVPAEEILAEFDLEGLDGQEIVDKLDR QSKDERNSDLLASVRPNELILATEQGQASLPLPEDKFYLSIAPYLSHTHDCFNHSLTTCT GELSQEDIHVTITDDEGNELVNEDTTTFDNGFIGYWLPADKKGTITIEQDGKTGEVPLDT SDEGGTCVTTLQMA >gi|227860893|gb|ACLH01000027.1| GENE 10 13500 - 14234 331 244 aa, chain - ## HITS:1 COG:no KEGG:cauri_2476 NR:ns ## KEGG: cauri_2476 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 244 1 244 244 474 100.0 1e-132 MRRATSRVRWEHHERPHVSELGTDRALFRLTKQLPDLVWNAAALEGNTFTLPEVRTLLDG VTVGGKALAEQQQILDLSEAFNLLHELVLKEECAVDKATSNALHAVLARNEALDAGLFRG EGHVEGDGGGVRLMDGGFIPFDPADELGEAHADLLVSLQGLENPVEQALAYFCSATRSQF YFDGNKRTARLVASGLLMSNGYAALNIPNARRLEFNLALDELFRSDDATTLMDFLYDCLE ESSQ >gi|227860893|gb|ACLH01000027.1| GENE 11 14238 - 14819 107 193 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227506253|ref|ZP_03936302.1| ## NR: gi|227506253|ref|ZP_03936302.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] conserved hypothetical protein [Corynebacterium striatum ATCC 6940] # 1 193 47 238 238 291 83.0 2e-77 MRVLGYEVSVSVHRMSDAAAATAARVLLGELISEDPDVKGWIDRFVQWGDAPGEDGDYQA LIERAGWASNPYGRRGALHFLPSNPITIASAVDASGQPWAMSGAFAAQRRSKQSAGRAEK PHSTLIWCTNPAEIVPSLPTRIRASAEPVSGGITLVPAAGEELTGATKESGIHYVSPHQH SIDVCAENYVGGA >gi|227860893|gb|ACLH01000027.1| GENE 12 15073 - 17604 2530 843 aa, chain + ## HITS:1 COG:no KEGG:cauri_2477 NR:ns ## KEGG: cauri_2477 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 843 5 847 847 1559 100.0 0 MSAEIYSLPTTPVVTTDIIEQGPRISLRRGSNILMLELPATYPEADLTDPRWVVKSHFID RPHSVREFATEEPLEVGIPGPFTRIEVTLRDGDEDLIETVTFTGITEDAPFIVYDRTTLI APQGTLEAAEPLGIWAGWEVGPLPDQVKVPQREPVDVAKHGDFEWDFDVAILPNARGLDN EPVFTKSPRVHLIAEGEWRIDLTYAPLGGEQEEISEQTFDAGIAEPFPGDLYEDPWVGRY KVSLWHDEELVDVRFISLAEGLHMRATNDGPRGMDFRIIDALGAHSAFSYTLASPPKKPI ALEKGLRTFEDTEVSRREVVASEAGYELEFDVWPEALFSRVKRIGLEPTEHSDKPVIFAG QLDQDDMFTVHSPRPLPLAKFVTIDGRQKIKELARTSKTTQAVTSLAVPNAALANAVRKQ PSAELFLMWSTLSYEDYLDSLPAEERAAHEARSLERRIVEYEASASTSLIYAALATVRKS PFVSRGLLDADANIVIEQNAEPPAEVVGWAWPLAEPTVAPTQLTPSEEGFELPADLAEQG SLLVDVRELRSSSNLAAPARPSSASIVITPEGSPAALASKDWTPEQLWGTFRALHVLSQR SPNPKLQAMFDSTIDRLRAQPEAAVHALARTGVSVNQQARSLARTRLFHSPLEATAESGV DSYLDLLLDPSASENPELTALRESGADGLTRPMLLNAATIHSPTPPVDDLMGEAGRVAAL RECFANNGALDALGTIDHLRKDATALASLVQNAGVDMSVSHTLIALGAFASGNTADELNA AAWMPYISYAFALASRAAANDIIMESPLLKEDMPMLADVLPLAPRLFFYDLVTAEALFHN RDL >gi|227860893|gb|ACLH01000027.1| GENE 13 17634 - 18284 658 216 aa, chain + ## HITS:1 COG:Cgl0198 KEGG:ns NR:ns ## COG: Cgl0198 COG2258 # Protein_GI_number: 19551448 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 3 210 5 209 211 245 58.0 4e-65 MKVISTNVAVRRPEPHGRHEYTGIDKQPRPFLDLEIPGPNYGDGSGVVGDSIGDHAHHGG AEKAVYAVAREELDYWEGTLNRVLRDGYFGENLTTEGISWPNMLINQRIQVGECVLEVSI PRTPCATFSGWMDEPGWLKSFTERGDCGSYLRIIEPGRITPGNEITLIGRPDHDITMGMA FAAKMGDKELARRVVDAGCLAPVHHDQLVKRLQPRG >gi|227860893|gb|ACLH01000027.1| GENE 14 18259 - 19674 492 471 aa, chain - ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 3 365 51 418 563 109 29.0 1e-23 MPSGGLIILGVNEKEGFVVTGIENPSEMEAALASQARHAITPPATVHTDSVAIDGTHVVI AEVTGLPIIDKPAIYRGEAYLRMADGDYRMSASELRMMDVAKLHAEEAVSYDTTIVEGTS LADLDSDVVQDFLVQARKKNRRLSGLTQDEDVLRALAVTTATGELTLAGLYALGFYPQGH FPSLAVTVAQRLPNGSKHGRVLGLETFEGPVPVLLNSVMGWVRQRLAAVRRYREDGSMVE VPELPLPAIREAVANALVHRDLGPNTLGAGKSIDVRLLPDKMVISSPGGLRDLTVEQLKS RDLARQEINQRLYRLCRYLKADDGSFVIEGEGGGVQLMLDAAREQGLPEPDLIDSGVQFT VKMWRPDTRGEARIWEPLRKEESGTGPERRVDAPVTLERLGVNAPRVAEALRTAAQPLSI GEIETATNLTRAQVRYALKSLVKARFVRMDGTRGSQATTYEWLANRGAADA >gi|227860893|gb|ACLH01000027.1| GENE 15 20173 - 20458 237 95 aa, chain + ## HITS:1 COG:no KEGG:cauri_2480 NR:ns ## KEGG: cauri_2480 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 95 1 95 115 145 100.0 7e-34 MEFSPELTSRAARIEREILDLNRHAASGQLESVARLLMRSEAISSSRIEGIAPNVDKVVL AELAQKEEVRGFKESAEEVARNLTVLRSIEKSFAT Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:15:27 2011 Seq name: gi|227860892|gb|ACLH01000028.1| Corynebacterium aurimucosum ATCC 700975 contig00083, whole genome shotgun sequence Length of sequence - 23204 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 11, operones - 6 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 113 - 694 316 ## cauri_0012 hypothetical protein + Term 802 - 859 3.1 2 2 Op 1 . + CDS 1149 - 1766 149 ## COG3177 Uncharacterized conserved protein 3 2 Op 2 . + CDS 1844 - 2353 222 ## COG3554 Uncharacterized protein conserved in bacteria 4 2 Op 3 . + CDS 2385 - 2828 61 ## COG1186 Protein chain release factor B + Term 3028 - 3068 0.2 5 3 Tu 1 . - CDS 2883 - 3191 223 ## COG3093 Plasmid maintenance system antidote protein - Prom 3355 - 3414 3.0 + Prom 3357 - 3416 2.5 6 4 Op 1 . + CDS 3454 - 3654 115 ## cauri_2486 hypothetical protein 7 4 Op 2 5/0.333 + CDS 3682 - 4041 410 ## COG0640 Predicted transcriptional regulators 8 4 Op 3 . + CDS 4038 - 5930 1100 ## COG2217 Cation transport ATPase + Term 5989 - 6036 1.0 9 5 Op 1 . - CDS 6085 - 6861 594 ## cauri_2489 putative zeta-toxin 10 5 Op 2 . - CDS 6864 - 7127 225 ## cauri_2490 hypothetical protein 11 5 Op 3 . - CDS 7158 - 8567 1868 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 8624 - 8683 2.8 12 6 Tu 1 . + CDS 8566 - 9639 795 ## COG2207 AraC-type DNA-binding domain-containing proteins 13 7 Op 1 . - CDS 9636 - 10967 895 ## cauri_2493 amine oxidase (EC:1.4.3.4) 14 7 Op 2 4/0.333 - CDS 10986 - 12497 1380 ## COG0531 Amino acid transporters - Prom 12664 - 12723 1.8 - Term 12664 - 12713 12.2 15 8 Op 1 1/0.667 - CDS 12738 - 14225 2126 ## COG1012 NAD-dependent aldehyde dehydrogenases 16 8 Op 2 5/0.333 - CDS 14235 - 15020 675 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 17 8 Op 3 . - CDS 15005 - 15790 885 ## COG3971 2-keto-4-pentenoate hydratase 18 9 Op 1 2/0.667 - CDS 15951 - 17027 1605 ## COG0346 Lactoylglutathione lyase and related lyases 19 9 Op 2 2/0.667 - CDS 17075 - 18589 2352 ## COG1012 NAD-dependent aldehyde dehydrogenases 20 9 Op 3 . - CDS 18606 - 19268 399 ## COG1802 Transcriptional regulators 21 9 Op 4 . - CDS 19265 - 20740 1614 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - Prom 20774 - 20833 2.4 + Prom 20733 - 20792 1.9 22 10 Tu 1 3/0.333 + CDS 20865 - 22229 1709 ## COG0477 Permeases of the major facilitator superfamily + Prom 22249 - 22308 1.8 23 11 Tu 1 . + CDS 22453 - 23203 981 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases Predicted protein(s) >gi|227860892|gb|ACLH01000028.1| GENE 1 113 - 694 316 193 aa, chain + ## HITS:1 COG:no KEGG:cauri_0012 NR:ns ## KEGG: cauri_0012 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 193 22 214 214 357 99.0 1e-97 MESQLVAYIDESSALKPPDRQEYMVCAAIIDTQDLEKIREELRPLRLPGQVKLHRTDERN SRRRKIVDTLSEIDSMQAIITHQSEVSKKTERHRRKCLEQMYFELSEMHVHNVTLESRQE AQNRRDVAHIVALQGQGQSAGIRLRHVRGGDDPLLWIPDAVLGALNTVHLGEEQYWEKLH EKVVLNRPTPDSL >gi|227860892|gb|ACLH01000028.1| GENE 2 1149 - 1766 149 205 aa, chain + ## HITS:1 COG:AGpA556 KEGG:ns NR:ns ## COG: AGpA556 COG3177 # Protein_GI_number: 16119611 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 38 171 107 241 393 75 37.0 9e-14 MICLKLATRTSSFQVEVDATPADCGVANINYERKPLTVPDTRNTGTNYADSRYQLPQIDT TEPTISVGLLEKLQRELMGEKGSIPTGLRTIQNWIGGSNHTPIGAEFIPAPPRLVHDLVD DLCLYLDGASHGALIQAAIAHAQFETIHPFADGNGRVGRALIHGILLRRGLTEYTILPVC LVLGTWSKSKATCLFAPSSVGKSSP >gi|227860892|gb|ACLH01000028.1| GENE 3 1844 - 2353 222 169 aa, chain + ## HITS:1 COG:mlr0268 KEGG:ns NR:ns ## COG: mlr0268 COG3554 # Protein_GI_number: 13470535 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 12 168 44 182 183 65 33.0 3e-11 MTASGVQYGDGYEATWELRAAENWVTERVSVNVEGDGWGRSLELFRSEQGVWSAETNEEG AQLEDLPSPGIVQSADLKAALDCALGLCPLTNTMPIRRLTLLETQVPKTQLIMAWIDIPS LQVIASDQYYSSVDSETVRYESGTRGVDVELEVDGGGVVVHYPDLARRV >gi|227860892|gb|ACLH01000028.1| GENE 4 2385 - 2828 61 147 aa, chain + ## HITS:1 COG:AGc57 KEGG:ns NR:ns ## COG: AGc57 COG1186 # Protein_GI_number: 15887394 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 144 20 153 156 90 46.0 1e-18 MNDLTIAPGPGIPGGLVIVAADLTERFAKSSGPGGQGVNTTDSKVQLSVDIATCSSLSDA QRRRVLHNHEHRLDGTVLTVTASTQRLQVRNRAEARERMAALLREALAPPPPPRRRTKPT RSSVRRRLEAKKRRSELKSTRRRPQIP >gi|227860892|gb|ACLH01000028.1| GENE 5 2883 - 3191 223 102 aa, chain - ## HITS:1 COG:Cgl1005 KEGG:ns NR:ns ## COG: Cgl1005 COG3093 # Protein_GI_number: 19552255 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Corynebacterium glutamicum # 8 98 7 97 99 131 64.0 3e-31 MTTTDKLPPVHPGEILMEDFLKGMGITQHKLAVSIGVPPRRINEIVHGKRAVTADTALRL AKFFEMSPQFWLGLQAQYDLDVAEDKILSEIERIQPVQAVSA >gi|227860892|gb|ACLH01000028.1| GENE 6 3454 - 3654 115 66 aa, chain + ## HITS:1 COG:no KEGG:cauri_2486 NR:ns ## KEGG: cauri_2486 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 66 31 96 96 119 100.0 5e-26 MGAWKHVKVVRDGVDVNVKILENLAAHVAPALGGSRTTKDQSSAIPSTNSCRSQDLRATV SSVHFE >gi|227860892|gb|ACLH01000028.1| GENE 7 3682 - 4041 410 119 aa, chain + ## HITS:1 COG:Cgl0882 KEGG:ns NR:ns ## COG: Cgl0882 COG0640 # Protein_GI_number: 19552132 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 112 1 112 119 171 78.0 3e-43 MLTIASRLDVMNRLGRAMADPTRSRILMTLLDGPGYPAEISQSLDLTRSNVSNHLSCLRD CGIVVAEPEGRKTRYEIADPHLAAALEALVNATLAVDENAPCIDTECSVPGCGEKGTDA >gi|227860892|gb|ACLH01000028.1| GENE 8 4038 - 5930 1100 630 aa, chain + ## HITS:1 COG:MT2048 KEGG:ns NR:ns ## COG: MT2048 COG2217 # Protein_GI_number: 15841474 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mycobacterium tuberculosis CDC1551 # 3 629 134 756 771 508 56.0 1e-143 MSSACGCEHEPATEIEELDRPWWKDPELLLPIFSGVALITGLALDWSDLETPATVLYWLG LLLGAYTFAPGAIRNLVTKRKLGIGLLMTISAVGAVILGFVGEAAALAFLYSIAEALEDK AMDRAQGGLRALLKLVPQTATVLRDGTTAEVAAKDLEAGELMLVRPGERIATDGIIRSGR SSLDTSAITGESIPEEVAPGDEVPAGAINSAGVLEVETTAAGTDNSLTTLVDLVEKAQAE KGDRARIADRIARPLVPGVMILAVLVGVIGSLLGDPETWITRALVVLVAASPCALAISVP LTVVAAIGAASQFGVVIKSGAAFERLGGIRHLAVDKTGTLTRNQPEVTGVVPADGFDRAQ VLSFAAAVEQQSTHPLAAAIVAAEPEAPTALDISEEAGHGIGGTVEGRRVLVGSPRWIDA GPLKADVERMESEGQTCVLVTVDDALAGAIGVRDELRPEVPDAVQSLHDNDVEVSMLTGD NTRTARALAEIAGIDDVRAELRPEDKASIVAELSSKTPTAMIGDGINDAPALAGATVGIA MGATGSDAAIESADVAFTGHDLRLIPQALQHARRGSRIINQNIVLSLAIIIVLMPLAISG VLGLAAVVLVHEVAEVIVILNGLRAARAKR >gi|227860892|gb|ACLH01000028.1| GENE 9 6085 - 6861 594 258 aa, chain - ## HITS:1 COG:no KEGG:cauri_2489 NR:ns ## KEGG: cauri_2489 # Name: not_defined # Def: putative zeta-toxin # Organism: C.aurimucosum # Pathway: not_defined # 1 258 1 258 258 503 100.0 1e-141 MLKAADFPVDDTFKRRVLERRIAYLFRQPSAEPEVIYVAGQPASGKSSVIEMLTDDHVVL DSDELRKYHPALDEIMERDPLRMDVLTNGPVPYWMSSLIEDGRQHGHSLIIENTLSNPEF IAGEIAKFRSAGFRVRVVGLAVAQEVSRLGVVQRYLEAQRVSRYPRWTNEVSHTSGFKAI VPGLQAIAPLVDDLEIRTRDGRTLSGIEDIEAERATWFDSPAVRADWLARFDSCDLSGLE AEKLTHNLVADAERIRKL >gi|227860892|gb|ACLH01000028.1| GENE 10 6864 - 7127 225 87 aa, chain - ## HITS:1 COG:no KEGG:cauri_2490 NR:ns ## KEGG: cauri_2490 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 87 1 87 87 128 100.0 8e-29 MSTAKVPEIEYAAFDAMKEVASSLKAAYFRQQLATDSALEIEYWTAQEDFVQRTVSGVDN TDLDEIRAAAEFFARLLDELETRAKVA >gi|227860892|gb|ACLH01000028.1| GENE 11 7158 - 8567 1868 469 aa, chain - ## HITS:1 COG:BMEII0141 KEGG:ns NR:ns ## COG: BMEII0141 COG1012 # Protein_GI_number: 17988485 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Brucella melitensis # 125 390 7 271 271 307 57.0 3e-83 MTQFATYADLLNAITDENGRDILNPATGEVVGRAPENTVEDLNAAVETARAAQKDFAKLS DEERCALLTKAAAAIDANAEALVELLSREQGKPLNGPNARFEVGACSGWLNATASFEHPN YTAVDDDITATVNYRPLGVVGAIGPWNWPMMITIWQIAPALRMGNAVVVKPSEYTPLSVL GLLKVVNSVLPEGVLQVVSGAGEVGAALTTHEGVDKIMFTGSTATGKKIVEASAANLTRL TLELGGNDAGIVLDDADPKEIAGDLFWGAFINTGQTCAAMKRVYVPESLYDAVCEALIEV AKASPMGVGLEEENVLGPLQNKQQFDIVDKLVTAAKDSGARVLLGGDPDYDAPGYFYPTT LVADIDPDNALVVEEQFGPALPIIKYTGLDWAIEQANKLDVGLGSSVWSSNRERALEVAA QLEAGTTWINSHGAVDPRVPFGGIKSSGYGVEFGTEGLKGLAYPQIING >gi|227860892|gb|ACLH01000028.1| GENE 12 8566 - 9639 795 357 aa, chain + ## HITS:1 COG:CC2399 KEGG:ns NR:ns ## COG: CC2399 COG2207 # Protein_GI_number: 16126638 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Caulobacter vibrioides # 59 354 14 312 312 94 27.0 3e-19 MRSPCEEVVGPANKAQRNFCPRCYLHHIYRIDSECTQFVQKCASSHDMIPVMSASAVEQF DIASWRTASSESFGQLDVDAEDPSSFHATLRSTKVGDISLFDMCTSPHTVNRSKIATDET PFCKLSLQITGSSTMSQDGRTCELRPGDLALYVTQRPYTLHYPEEQNTLIVHFPQSFLDI SPAQIQRLTANPISRSHGLGAVAVPLFEQLAENLDLLKGPHATALVRSALTMLVSVLASD VADEPSAGTLLFNQATAYIEQHLGDSDLGPSTIAQALFVSVRHLHAKFSEQGLSVGSYIR TRRLEHIRRELVDPRHSEESISHISARYGLHDPSHLSRIFKAEFHKPPSAYRAAASD >gi|227860892|gb|ACLH01000028.1| GENE 13 9636 - 10967 895 443 aa, chain - ## HITS:1 COG:no KEGG:cauri_2493 NR:ns ## KEGG: cauri_2493 # Name: hpaY # Def: amine oxidase (EC:1.4.3.4) # Organism: C.aurimucosum # Pathway: not_defined # 1 443 1 443 443 880 100.0 0 MEKKNVIVVGAGFAGLTAARELQIAGIDYHIVEARDRIGGRAWTDDRLGRPLEIGATWVH WHQPHVWSEITRYGQDIIASPVVDTAYWYAGGELKSGTEAEMDAKLARPMEKIFENSREF FPEPHKPLLVLDEKFGASQELKDAFLAADQAGVLDALEDGDFTQEEKDLCNAYWSAGYIG YPEQGSSLMAKQWAALCDHRLSLVDEQTLRYKLVNGMRGIYGNIAKDLTGEIRLNTVVTA IEHGEDSATVTYADGTSETADAVIVTVPVGALGNITFTPGLPEGAQKTVEQKWNSTGFKA WIKIKGHHNIFGYAPQPAVVSVLRSEYFEDDDTTICVAFGSDHEKIDLESIEDAQKVVDQ WRPDLEVVGVTGHDWVADEYSGQAWATLRRGQFTEGWHHFRTSTSSLHFAGADWASGWRG VVVDGAIETGISTAREVINKLRG >gi|227860892|gb|ACLH01000028.1| GENE 14 10986 - 12497 1380 503 aa, chain - ## HITS:1 COG:BMEII0126 KEGG:ns NR:ns ## COG: BMEII0126 COG0531 # Protein_GI_number: 17988470 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Brucella melitensis # 24 471 23 466 497 205 36.0 1e-52 MDTSTQSPVLPARNVQPGHRAPNDQEGGLGAGRLGTTSLVFMIIAASAPLTVLAGGVPTN FAVSGLLGVPWSYLALGIILVFFAVGYGIMSSKIQNSGAFYAYVSEGLGNRQGIAAAILA LVSYNMMQVGLYGIFGFSLANLINGWFGTSISWWMAALVGWLLVAVMGVSNVDFSAKVLG VLVALEFLVVAGVSLLSLGVAPEGITAETMRPDQFFTDGIGVLLAFGIAAFMGFESGAIY SEEARNPERTVPKATYIAVGTIALFYAFSAWAFAQGVGPSVVIDKATEFGPDLVFVWLGD YSVFASNVANCLFVTSLIAALVAFHNAAARYFFSLGRSRVLPKKFATSSAKGAPIAGSLT QTTLAVVVVAGFAVAGNGSEMGELFPVLTLFTWLTNAAAFGLVFLLAVVSVSIMVWLNKQ EKGYNLFTRIIAPLVSACGLSAVFVLVLMNFPLMIGDTGPDALVWVMPGIIIVSGILGLV WGEYLKHKKPHIYAGLQDNLDQI >gi|227860892|gb|ACLH01000028.1| GENE 15 12738 - 14225 2126 495 aa, chain - ## HITS:1 COG:Cgl0050 KEGG:ns NR:ns ## COG: Cgl0050 COG1012 # Protein_GI_number: 19551300 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 7 493 3 489 490 700 76.0 0 MSENNKVNIDELLAKVPTGLLINGEWVEASDGSTFDVENPATGEVIATLASATSEDAKKA LDAACAVQDEWARTSTRERSNLLRRAFDLVQERKDEFAALMTLEMGKPLAESYGEVTYGA EYLRWFSEEAVRDYGRTLPAPEGTLRMVTRRKPVGPCLLITPWNFPLAMATRKIAPAIAA GCTMVVKPAKLTPLTTQYFAQTMIDAGVPAGVVNVVSGKSASAISEPIMADSRLRKVSFT GSTPVGKTLLKAAADNVLRTSMELGGNAPFIVFEDADIDQAVEGAMGAKMRNIGEACTAA NRFIVHESIADEFAEKFAKRIGELKVGNGLDEGVTCGPLVEQKALDNITALVDDAVAKGA KAIVGGKPGEGKGYFYSPTVLTNVPRDARVAQEEIFGPIAPILTFSDEKEAIEIANDTEY GLASYVFTEDSDRMWRIGDGLEFGLMGFNAGVISNAAAPFGGVKQSGMGREGGAEGLDEY TSLQYIAMRDPYANA >gi|227860892|gb|ACLH01000028.1| GENE 16 14235 - 15020 675 261 aa, chain - ## HITS:1 COG:PM1535 KEGG:ns NR:ns ## COG: PM1535 COG3836 # Protein_GI_number: 15603400 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Pasteurella multocida # 17 257 10 250 266 221 44.0 9e-58 MPIPVKLPPTFADVLEKAEQPLVGAWICSGSEAAAEIIASAGFGWTLIDGEHSPYGLETI LSLLRATDAYGLTRVVRVPVNNTALIKQYLDLGVQNLMVPMIDTAEEAEAAVAAMHYPPR GVRGVGSALARSSRWNGVENYLANASDTVSLTVQIESATAVENVEEIVAVEGVDNIFVGP SDLAASMGLLGQQTHPDVLEAVNHTFEAVRASGKKVGVNAFNLEQAQKYMASGASFALVG ADVQLLSGAARQLADKFHLGG >gi|227860892|gb|ACLH01000028.1| GENE 17 15005 - 15790 885 261 aa, chain - ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 1 260 1 266 267 291 54.0 7e-79 MLDEKQHIAIADELAQAEKDRTMVPLLTARFPGMSIEDSYAVQREWVRRGEENGRRLVGR KIGLTSKVMQEATGITEPDYGAIFEDQVYENGSTIEHAQFSNVRIEVELAFVLKEELKGP NCSIFDVLRATEYVVPALEILSSRIEMEGRTIVDTISDNAALGAMVYGGNPVDPADVDLR WVSALLYRNESIEDTGVAAAVLNHPAMGVAWLANKLHAHGDSLAAGDIILAGSFTKPMWV EPGDTVHADYGKLGSITCRFQ >gi|227860892|gb|ACLH01000028.1| GENE 18 15951 - 17027 1605 358 aa, chain - ## HITS:1 COG:BMEII0136 KEGG:ns NR:ns ## COG: BMEII0136 COG0346 # Protein_GI_number: 17988480 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Brucella melitensis # 8 303 18 311 331 249 44.0 6e-66 MADIQAPDILRCAYMEIIVTDLAASRKFYVDTLGLVVTEENENEIYLRTYEEFIHHNLVL RQGPVAAVAAFSFRVRSPEDLDLAEEFYKARGCEVRRNKDGFVKGIGDSVRVQDPLGFPY EFFYEVEHRERLAWSYDAHIPGALVRLDHFNQITPDVPAAVKYMEELGFRTTEDIRDEEG TVYAAWMRRKPTVHDTAMTGGDGPRMHHIAFATHEKHNIIAICDKLGALRESDRIERGPG RHGVSNAYYLYLRDPDGHRVEIYTQDYYTGDPDNPVVTWDVHDNQRRDWWGTPVVPSWYR DGSTVLDLDGNPVPLVAREDESELEATIGADGFSYTRKEDAEEMPEWKQGEYKLGHQL >gi|227860892|gb|ACLH01000028.1| GENE 19 17075 - 18589 2352 504 aa, chain - ## HITS:1 COG:DRA0220 KEGG:ns NR:ns ## COG: DRA0220 COG1012 # Protein_GI_number: 15807884 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Deinococcus radiodurans # 4 492 15 501 524 459 51.0 1e-129 MAINNDAAKPTDLPEKILHYINGEFVPSIDGDEFEVLDPVTNKTYIKAASGKPEDIDKAV AAAKEAFENGPWSKALPRERARVLNKIADIVESRADKLAAWESFDSGLPITQANGQAKRA AENFRFFADLIVAQADDAYKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAIAT GNSVVLKPAEFTPLSAQLWAGIFEEAGLPKGVFNLVNGFGEEGYAGDPLVKHPDVPLISF TGESRTGQIIFGNAAPHLKGLSMELGGKSPAIVFSDADLETAIDACIFGVFSLNGERCTA GSRILVQRDIYDEFVERYAAQAKRVKVGLPSDPTTEVGALVHPEHYEKVTSYIEIGKQEA TLAAGGERPEGFPEGNFVQPTVFVDVKPDARIFQEEIFGPVVAITPFDTDEEALELANNT KYGLAAYVWTSDLKRAHNFAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRSID FYTDQQAVHINLDKVHNPVFGKQD >gi|227860892|gb|ACLH01000028.1| GENE 20 18606 - 19268 399 220 aa, chain - ## HITS:1 COG:STM3357 KEGG:ns NR:ns ## COG: STM3357 COG1802 # Protein_GI_number: 16766652 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 11 206 13 198 221 75 30.0 7e-14 MTEPALPAGESKSQQAYNWISEKIRTREYEPGYRLVLATIAEELGVSVVPVREAIRQLEA EGMVTYERNVGASVTTYNREAYYESMDIVATLEANATAQSAQYLDAEDIARAREINQRMR ELDILHDPEEFTQLNKEFHSVLFSKCPNERMKNLVVDQWKQLEYHRVSTFRYVPERAQES TREHEQLLSLIEAGAEPAYIEKVARQHRLTTLSTYRKKND >gi|227860892|gb|ACLH01000028.1| GENE 21 19265 - 20740 1614 491 aa, chain - ## HITS:1 COG:PM1529 KEGG:ns NR:ns ## COG: PM1529 COG0179 # Protein_GI_number: 15603394 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Pasteurella multocida # 6 216 38 248 254 138 36.0 3e-32 MAVPEFLPVKPGKMIAVHVAFESRAAQRGRWPKTPSYFLKATSTLAESGGIVERPQGTEL LAFEGEIALIIGTPARNVSLEDAWKHVAYVTASNDIGLYDYKVQDKGSNTRSKSRDGYTP IGPELIDAQGIDPKGLRLRTWVNGEVVQEGTSSDEDLIFPLAQFVADLSQHMTLEAGDII LTGTPAGSSVIEPGDVVEVEVDVPGGVSSGRLKTTAKEVPASFDPQLGNLPYVDDKQRED AYGDRESAGLPPKDEGGLAPELKAALEKAPTAGLSAQLRKRGINQSVIEGVYPQATGTKM VGVARTLRFVAGREDLFKSHGGGLNEQKKVFDTVKEGEVIVIEARQESGSGTLGDILALR AKVRGAAGVVTDGGVRDYEAVKEIGLPVFTQGAHPCVLGRKHVPWDSDIAVSCGNATVLP GDIIVGDDDGVVVIPRDIAAEVAEDALAKEHEDEWVASQVETGASLDGLFPPTGANKEAY IAFRDGKAGGQ >gi|227860892|gb|ACLH01000028.1| GENE 22 20865 - 22229 1709 454 aa, chain + ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 10 432 15 436 438 245 34.0 1e-64 MSHTTVTPAISTAERRRVVAATTIGTAIEWYDYFLYAAVAGLVFNQLMFGPLEGGLATII SFLTVGLSFLFRPVGAFLAGHFADRLGRRVVLMVTLLAMGGATTLIGLLPTYETAGIWAP ILLITLRIIQGISAGGEWGSAVLMAVEHAPNDKRGLYGAGPQIGVPAGLLLSSGVLSIMN TIAPGDAFMSWGWRVPFLLSFVLILVGYLIRMGVDESPVFEEIAEREEEEATNPIGKLFK NFTPLVLVAALVFAGNGTVGYMTTGGYIQRYATDPDGPVALDRGDVLNAVTVSAFAWALT TLLAGFISDYIGRRKTYLLGFILQGIGAAALFPLVNTGSLGMLYGALLFLTVGLGLTYGA QSAMYAELFPASIRATGVSITYALGSVLGGAFAPMIAASLVEATGTTFAVSGYLVSASII GFICTFILRERKGIDLGAEHEAEQSQGHFIFSQR >gi|227860892|gb|ACLH01000028.1| GENE 23 22453 - 23203 981 250 aa, chain + ## HITS:1 COG:Cgl2625_1 KEGG:ns NR:ns ## COG: Cgl2625_1 COG0654 # Protein_GI_number: 19553875 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 249 1 254 403 277 54.0 1e-74 MQFHHNGYVSEDPRVHEPAGYGIDRVSELPDEMDVLIVGSGPAGMIAAAQLAMFPDVNTR IIERRPHRLELGQADGIQSRSVETFQSFGFAKEITEEAYEITEMSFWNPDPQDRSKIIRG ARPIDDEQGISEFPHLIVNQARVLDYFARYAHRAPGRITPDYGWTFVSLEVREGEYPVTV HLEDVDGNPRDVRAKYVVGCDGAKSRVRKSIGRSLKGDQANHAWGVMDVVVDTDFPDWRT KCAIHSQAGS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:15:51 2011 Seq name: gi|227860891|gb|ACLH01000029.1| Corynebacterium aurimucosum ATCC 700975 contig00084, whole genome shotgun sequence Length of sequence - 12198 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 4, operones - 3 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1038 1081 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 1071 - 1108 10.1 - Term 1140 - 1188 13.2 2 2 Op 1 13/0.000 - CDS 1213 - 2001 240 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 2 Op 2 9/0.000 - CDS 2005 - 2862 897 ## COG4120 ABC-type uncharacterized transport system, permease component 4 2 Op 3 . - CDS 2859 - 3785 1120 ## COG2984 ABC-type uncharacterized transport system, periplasmic component - Prom 3834 - 3893 1.6 5 3 Op 1 35/0.000 + CDS 4192 - 5691 1494 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 6 3 Op 2 13/0.000 + CDS 5688 - 6332 721 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 7 3 Op 3 21/0.000 + CDS 6332 - 7369 1098 ## COG0547 Anthranilate phosphoribosyltransferase 8 3 Op 4 13/0.000 + CDS 7347 - 8729 1383 ## COG0134 Indole-3-glycerol phosphate synthase 9 3 Op 5 37/0.000 + CDS 8775 - 9989 1122 ## COG0133 Tryptophan synthase beta chain 10 3 Op 6 . + CDS 9989 - 10819 382 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 10901 - 10960 2.7 11 4 Op 1 . - CDS 11097 - 11387 208 ## cauri_2513 hypothetical protein 12 4 Op 2 . - CDS 11384 - 12118 162 ## cauri_0093 hypothetical protein Predicted protein(s) >gi|227860891|gb|ACLH01000029.1| GENE 1 1 - 1038 1081 345 aa, chain + ## HITS:1 COG:Cgl2625_1 KEGG:ns NR:ns ## COG: Cgl2625_1 COG0654 # Protein_GI_number: 19553875 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 119 278 402 403 158 57.0 1e-38 PENDNHKVRSTPIEKIIEKANEIYSPYFIDVKMVAWHSVYEVGHRLVDAFDDNDDDPRVF LTGDACHTHSAKAGQGMNVSMQDGFNIGWKLGHVLDGRAPKELLTTYHGERQPAAQNLIN FDREWSTLMATPTEELDDPEAVEKYYVAAEEFAAGMMTQYEENLIVGTTQHQDLASGFPV GKRFKSFEVLRRCDAYPQHLGHQHTADGRYRIYAFADAPKAGENSTLSEWAEKLGPILDK FTPEGADENTYFDVKVIYQQTNHHDYEILDAPLLFRPRNGKFNIPNWENVFNALPGDKDI FDARGISRDGAVVIVRPDQYVGAVLPLDDPSAVEDYFSSALIKLK >gi|227860891|gb|ACLH01000029.1| GENE 2 1213 - 2001 240 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 235 1 225 245 97 31 6e-20 MLNIDKISKTFFPGTVNERRALREVSLELAPGDFVTVIGSNGAGKSTLLNSVAGRLIPDS GRISIDGKDVTNQPEHKRARKVGRVFQDPMAGTAPNLTIEENLSLAYLRGKKRGLGLGLN SARRAVFVEQLESLELGLEKRLGTKVGLLSGGQRQALSLLMAGFTNPKVMLLDEHTAALD PQRAELVTTLTKRIVEQGQLTTLMVTHNMAQALQVGNRLIMMHEGEIIYSADAEEKAKLT VEDLMAEFAKIKGATSDRTLLQ >gi|227860891|gb|ACLH01000029.1| GENE 3 2005 - 2862 897 285 aa, chain - ## HITS:1 COG:Cgl2197 KEGG:ns NR:ns ## COG: Cgl2197 COG4120 # Protein_GI_number: 19553447 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Corynebacterium glutamicum # 1 275 1 277 296 318 70.0 7e-87 MIGALELGLIYAVMAVGVYLTFRVLDFPDLTVDGSFTTGAATAGVLITNGVNPFLSSLAG FATGFVAGCITGLLHTKGRIDGLLAGILTMIGLWSINLRIMGSANVPLLTQDSVFTPLDA VMGTWAGVGLLAVGAVVLCLLIVWFLSTDLGLSLRATGDNQQMITSFGVSTDFTKILTLA LSNGLVGLCGALIAQYQGFADISMGIGLILVGLASVILGQAVLPQSRLWMAVVAVALGSV IYRLIIFAALQVGLNPNDMKLITALLVIVALLVPRMTRVRGKRKA >gi|227860891|gb|ACLH01000029.1| GENE 4 2859 - 3785 1120 308 aa, chain - ## HITS:1 COG:Cgl2198 KEGG:ns NR:ns ## COG: Cgl2198 COG2984 # Protein_GI_number: 19553448 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Corynebacterium glutamicum # 16 306 38 328 330 337 72.0 2e-92 MGCSSSSESASGDSGGGDSYSIGINQLVQHPSLDAAAEGFQEAFEEAGVDVEWDVQNANG EQGTAVSISQQMANANHDLYLAIATPAGQAMSKSIKDKPLLFTAVTDPVEAELVEALDKP GKNVTGTSDAAPIEEQVELISQLVPDAKTVGVVYSSAEVNSKVQVEQLTEAAKPKGIEVK SQTVTSVTEIPQAVEALGDVDAIYIPTDNMVVSGISSLIKVANDKTIPVIAADSGAVEGG AAATIGIDYKELGRQTGEMALRILQDGADPAETPVETASEYTYVINEDAVKAQGIEVPQE ILDKAETL >gi|227860891|gb|ACLH01000029.1| GENE 5 4192 - 5691 1494 499 aa, chain + ## HITS:1 COG:Cgl2971 KEGG:ns NR:ns ## COG: Cgl2971 COG0147 # Protein_GI_number: 19554221 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Corynebacterium glutamicum # 2 499 5 518 518 551 58.0 1e-157 MPFTAKRKVRYTPDASALFYALATPQDSLLLESADIESKKNLTCIAITKAALKVACRGQE VTATALTPAGHLLLDELRQDFRFRMSQDGEDSATFSFELSTEHDERARLRATSTADILRT LQFSQPYSGESLPFLGGGFAFDYIDTFEALPPVPDGPNEYPDYEFLVAEHVLTVDHLTQT AKIEGWGVDKHALEEELDRAAATGPITPEAPSPRETISARASIDDAAFRRHVERLQGNVH AGDIYQVVPSRAFSLDCPDAFAAYRTLRETNPSPYMFYVRGAEHELFGASPESNLKYTAS DRQVQLYPVAGTRPRGATHELDIRNELEMRTDSKEVSEHIMLVDLARNDLARVAVPGTRK VADLLQVDRYSRVMHLVSRVVATLHEDFDALDAYRACMNMGTLTGAPKLRAMELIRETEG TRRGSFGGAIGYLRGDGSMDNCIVIRSAYVKDGTAVVQAGAGVVRDSVPQSEADETVHKA YAVLSAIAQAHNANLEVIR >gi|227860891|gb|ACLH01000029.1| GENE 6 5688 - 6332 721 214 aa, chain + ## HITS:1 COG:Cgl2972 KEGG:ns NR:ns ## COG: Cgl2972 COG0512 # Protein_GI_number: 19554222 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Corynebacterium glutamicum # 4 204 3 205 208 265 66.0 7e-71 MNPHVVLIDNHDSFVYNLVDALAGYNTTVFRNTVPVEEVLAPQPDIIILSPGPGHPRDAG SMMQLIDASLGRIPILGICLGFQALLEHFGGTVEACGPVHGSSVPMTLTDAGAKHPLFHG LTTDSEPDNPNYVGRLVPVARYHSLGCANIPAQMRSLAETETAIGPVTMAAETLDGKALG LQFHPESVLTPTGPIIIERCIKQLSTQPTTKGTK >gi|227860891|gb|ACLH01000029.1| GENE 7 6332 - 7369 1098 345 aa, chain + ## HITS:1 COG:Cgl2973 KEGG:ns NR:ns ## COG: Cgl2973 COG0547 # Protein_GI_number: 19554223 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 1 345 1 346 348 457 71.0 1e-128 MTDNKALKILQEFLDISEPTLEQAIEVFTPLTVGEYDDIHIAALLTHIRTRGETFADVAG AARAFLNAGHPFPITGKGLMDTAGTGGDGANTINVTTGASLVASAGGVKMVKHGNRSVSS KSGSADVLEALGIPLNLDPDRAVRQLEASNFTFLFAPAYNPAVAHVQPVRKGLGISTLFN TMGPLLSPGRPEFQIMGIANPEQGQLIAEVFKDLGRTRALVVHGAGTDEIAVHGTTQVWE LRDGTISHYELTPEDLGISHHELADLAGGNGEENAKALRAVFAGTGEPAHHDAIAATAGA MFYLNGTTDSIHEGVTHADQLIKNGTVAAWLKKHEEANYGSADRA >gi|227860891|gb|ACLH01000029.1| GENE 8 7347 - 8729 1383 460 aa, chain + ## HITS:1 COG:Cgl2974_1 KEGG:ns NR:ns ## COG: Cgl2974_1 COG0134 # Protein_GI_number: 19554224 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Corynebacterium glutamicum # 6 252 1 250 250 334 68.0 2e-91 MALPTVLEGIVAKRRTHLPAIRERLAHVDLAALPRSKRSFYDALNGTNRFIMECKSASPS LGLIREHYEPGAIARIYSRYASAISVLCEPDRFGGDYDHMQTVALSTHLPVLCKDFIIDP IQVYAARYFGADAILLMMSIVDDETYAELKQLADSLGLDVLTEAITEEEVARATAFGIDA IGINNRNLHDLSIDLTRSERLSHHVPSGKVIVSESGIRDNQTVRHLGSHANAFLVGSQLT GTPDIDRAARELVYGHNKVCGLTTWSAAQAARAAGAIYGGLIFEEASPRNVSRETALDII AHEPDLNYVAVSRRTTGWEDLAIDGISALQIHAPYQGSTEAELELIESVRAAVGERQVWR AIDMTAPHGPALASALADAVDLLILDSATGGTGTSFDWTSVPDEVKAKSLLAGGLKPENL TEALRVGTAGLDINSGVEVNVRKDSALIAQAFHIIRHFTY >gi|227860891|gb|ACLH01000029.1| GENE 9 8775 - 9989 1122 404 aa, chain + ## HITS:1 COG:Cgl2975 KEGG:ns NR:ns ## COG: Cgl2975 COG0133 # Protein_GI_number: 19554225 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Corynebacterium glutamicum # 10 404 11 417 417 660 82.0 0 MTNDQDIRETILPAYFGEFGGQFVPESLIPALDQLEQAFVDAQNDPAFREELASYLRDYL GRPTPLTEATKLGGKARIFLKREDLVHGGAHKTNQVIGQALLAKRMGKTRIIAETGAGQH GTATALACALLDLDCVIYMGAKDVERQQPNVYRMELMGAKVVPVDSGSGTLKDAVNEALR DWTATFHESHYLLGTAAGPHPFPTIVREFHKVISEEAKAQMLERTGGLPDVVVACVGGGS NAIGMFADFIDEESVELVGAEPGGEGLDSGHHGATINNGTIGILHGARSYLMRNADGQVE ESYSISAGLDYPGVGPQHAHLAQTGRATYIGITDAEALEAFQILSRREGIIPALESSHAL AYALKRKDEDITILVSLSGLGDKDIDHVRRTLDTHPEFKITEDK >gi|227860891|gb|ACLH01000029.1| GENE 10 9989 - 10819 382 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 238 1 236 263 151 34 2e-36 MSRYEKLFSSLAARKEGAFVPFIMLSDPNPDTALAIVRAAVAGGADALELGVPFSDPVAD GPTIQASHIRALAGGATVDSAIEQIRRIRNEFPDLPIGMLIYGNVPFTRGLETFYSEFQE AGADSILLPDVPVREGAPFVAAAEKAGIDPIFIAPAQASEQTLQGVAQYSKGYIYAISRD GVTGTEKESETRGLDEVVNNVKRFGGAPILLGFGISTPQHVADAIAAGAAGAITGSALTK IVDAHLDEEGRPADGLAAAVTGFVSKMKAATKHAES >gi|227860891|gb|ACLH01000029.1| GENE 11 11097 - 11387 208 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_2513 NR:ns ## KEGG: cauri_2513 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 96 28 123 123 192 100.0 5e-48 MKTDGRAFYILDPVTGDVVWLFEDGTWAVTEATGPLAPASKVWARTIAEDVISHRRKMHE EAKALKVELDGGEMVEIFDRTDPADRYSSGHEDIPF >gi|227860891|gb|ACLH01000029.1| GENE 12 11384 - 12118 162 244 aa, chain - ## HITS:1 COG:no KEGG:cauri_0093 NR:ns ## KEGG: cauri_0093 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 202 84 285 425 259 61.0 5e-68 MQDAQFLLDMQALVAIDQVMAKLGNPISSVVAEIDSQLAAWLTPTKPNQLFPTADKIRRK VRDIAKVLDDSIAFRDRRKKNRYSLLTRGERASIELEVDSNVGIVIHETIKLAAKEHDVS MADALILLITGEIKPEVGKVVVHEYKSTDVEGSPVYVQGHGWTGEGVPASKTVTRDFSDA PEPCRGYQPSDATRKYVEGRDARVAPPAVIVLHGPANWTIGSTIPMVARRMHPIWLLFAS TTTT Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:16:11 2011 Seq name: gi|227860890|gb|ACLH01000030.1| Corynebacterium aurimucosum ATCC 700975 contig00085, whole genome shotgun sequence Length of sequence - 39180 bp Number of predicted genes - 41, with homology - 41 Number of transcription units - 16, operones - 8 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 264 112 ## cauri_0093 hypothetical protein - Prom 312 - 371 3.6 - Term 427 - 466 0.9 2 2 Tu 1 . - CDS 541 - 1776 1397 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 1856 - 1915 3.4 + Prom 1815 - 1874 3.4 3 3 Tu 1 . + CDS 1934 - 2398 432 ## COG5658 Predicted integral membrane protein + Term 2481 - 2529 2.2 + Prom 2413 - 2472 3.0 4 4 Op 1 . + CDS 2565 - 2846 256 ## gi|262183069|ref|ZP_06042490.1| hypothetical protein CaurA7_03682 5 4 Op 2 . + CDS 2898 - 3269 381 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 6 4 Op 3 . + CDS 3345 - 4304 745 ## COG0385 Predicted Na+-dependent transporter 7 4 Op 4 . + CDS 4311 - 4619 533 ## cauri_2519 hypothetical protein 8 5 Op 1 . - CDS 4757 - 4948 174 ## cauri_2521 hypothetical protein 9 5 Op 2 1/1.000 - CDS 4933 - 5649 581 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 10 5 Op 3 1/1.000 - CDS 5685 - 6284 682 ## COG1678 Putative transcriptional regulator 11 5 Op 4 . - CDS 6287 - 7720 1738 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 12 6 Op 1 . + CDS 7749 - 8351 486 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 13 6 Op 2 . + CDS 8348 - 10489 1445 ## cauri_2525 hypothetical protein 14 6 Op 3 . + CDS 10499 - 13741 3497 ## COG0728 Uncharacterized membrane protein, putative virulence factor + Term 13824 - 13867 1.4 + Prom 13858 - 13917 6.3 15 7 Tu 1 . + CDS 13962 - 14495 906 ## COG2353 Uncharacterized conserved protein + Term 14536 - 14590 16.1 16 8 Tu 1 . + CDS 14659 - 17187 3333 ## COG0308 Aminopeptidase N 17 9 Op 1 . + CDS 17327 - 17869 320 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 18 9 Op 2 11/0.000 + CDS 17924 - 18850 750 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 19 9 Op 3 2/0.000 + CDS 18858 - 19181 380 ## COG0526 Thiol-disulfide isomerase and thioredoxins 20 9 Op 4 . + CDS 19247 - 20431 1345 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Term 20498 - 20531 -0.2 21 10 Op 1 . - CDS 20591 - 21166 657 ## cauri_2533 hypothetical protein 22 10 Op 2 25/0.000 - CDS 21173 - 22228 1316 ## COG1475 Predicted transcriptional regulators 23 10 Op 3 15/0.000 - CDS 22235 - 23083 1054 ## COG1192 ATPases involved in chromosome partitioning 24 10 Op 4 . - CDS 23094 - 23723 686 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 25 10 Op 5 18/0.000 - CDS 23747 - 24736 1486 ## COG0706 Preprotein translocase subunit YidC 26 10 Op 6 16/0.000 - CDS 24746 - 25024 201 ## COG0759 Uncharacterized conserved protein 27 10 Op 7 . - CDS 25012 - 25380 203 ## COG0594 RNase P protein component 28 10 Op 8 . - CDS 25384 - 25527 232 ## PROTEIN SUPPORTED gi|227490374|ref|ZP_03920690.1| 50S ribosomal protein L34 29 11 Tu 1 . + CDS 26327 - 27967 1680 ## COG0593 ATPase involved in DNA replication initiation + Term 28013 - 28049 -0.5 30 12 Op 1 18/0.000 + CDS 28391 - 29725 1361 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 31 12 Op 2 5/0.000 + CDS 29731 - 30909 1012 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 32 12 Op 3 5/0.000 + CDS 30896 - 31444 380 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives + Prom 31475 - 31534 3.4 33 12 Op 4 . + CDS 31575 - 33620 2635 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 33637 - 33685 15.0 - Term 33630 - 33669 10.7 34 13 Op 1 . - CDS 33693 - 34139 487 ## cauri_0006 putative secreted protein 35 13 Op 2 . - CDS 34150 - 34596 569 ## cauri_0007 putative secreted protein 36 13 Op 3 . - CDS 34647 - 34907 141 ## cauri_0008 hypothetical protein 37 13 Op 4 . - CDS 34904 - 35164 192 ## gi|262183103|ref|ZP_06042524.1| CopG family protein - Prom 35205 - 35264 2.5 38 14 Op 1 . + CDS 35205 - 37793 3497 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 39 14 Op 2 . + CDS 37797 - 38144 406 ## cauri_0010 hypothetical protein + TRNA 38232 - 38308 98.7 # Ile GAT 0 0 + TRNA 38318 - 38390 87.3 # Ala TGC 0 0 - Term 38388 - 38434 7.5 40 15 Tu 1 . - CDS 38481 - 38747 102 ## cauri_0011 putative secreted protein + Prom 38534 - 38593 2.6 41 16 Tu 1 . + CDS 38833 - 39060 239 ## gi|262183106|ref|ZP_06042527.1| hypothetical protein CaurA7_03867 Predicted protein(s) >gi|227860890|gb|ACLH01000030.1| GENE 1 3 - 264 112 87 aa, chain - ## HITS:1 COG:no KEGG:cauri_0093 NR:ns ## KEGG: cauri_0093 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 6 87 2 83 425 101 58.0 7e-21 MGTTTNSSTSIPTAYFSHSNPHDPDCKAGQLMRRIEYEFWSSVQPPLDADSDTAFMRIGQ KTGKSLAHVARNVMGLIRLNELPKVKA >gi|227860890|gb|ACLH01000030.1| GENE 2 541 - 1776 1397 411 aa, chain - ## HITS:1 COG:Cgl2969 KEGG:ns NR:ns ## COG: Cgl2969 COG1301 # Protein_GI_number: 19554219 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Corynebacterium glutamicum # 8 392 3 385 412 440 64.0 1e-123 MTFKSVLNSLLFKIIVAIVLGIIVSQFAPEWFGRAFATYNGLFSNFLGFFIPILILALVA PAIAGLGRGAGKWLGITAGIAYGSTIVAGLVAYGLTQALYPTLLAGQTLNTEVSDIDAGA LEPYFTVEMPAPFEVMTALLLSFCIGVAMTTVKSDNLYAITKEFENVVIKVIWGFVIPLL PIYIFGMFLSLGMNGNIGTVLIAFTKVLLLAVVMTLVYLVLQYVIAGAIAGKNPFSALKN MAPAYFTALGTSSSAATIPVTLGATLKNGISKPVAGFVIPLCATIHLSGSMIKLTLYAFA IVFMADGMEADLGKALGFILLLGIMMIAAPGVPGGAVMVAVGLLQANMGFDDSMVALMIA AYIAIDSVGTAANVTGDGAIAMIVDRFARDKIEGLEAEVDSSAANEEAATP >gi|227860890|gb|ACLH01000030.1| GENE 3 1934 - 2398 432 154 aa, chain + ## HITS:1 COG:Cgl2970 KEGG:ns NR:ns ## COG: Cgl2970 COG5658 # Protein_GI_number: 19554220 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 2 146 6 162 170 101 38.0 6e-22 MLVVGIIFLILAAVLIVVGGLATLRKLPGNSVVGLRLAEIRKSKEAWDNAHAVAGPFWFL GGIALIFGGIIALRAEGWMWLIPALTFVVAVLALSIGSNMGARASYLWNQAHKEEEGCGD SCNCGNGGCGGEAPTVDVSAARAAAERADNMNKN >gi|227860890|gb|ACLH01000030.1| GENE 4 2565 - 2846 256 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183069|ref|ZP_06042490.1| ## NR: gi|262183069|ref|ZP_06042490.1| hypothetical protein CaurA7_03682 [Corynebacterium aurimucosum ATCC 700975] # 20 93 1 74 74 132 100.0 9e-30 MGERGGAVTRHDHRRTMDPMNRVANIRTFRIIAAAALSLSILGAGATYALASDTRTGHTV AGTIYNDVGTNYGAYDFSGSREEELPVWDGKLS >gi|227860890|gb|ACLH01000030.1| GENE 5 2898 - 3269 381 123 aa, chain + ## HITS:1 COG:Cgl2981 KEGG:ns NR:ns ## COG: Cgl2981 COG2146 # Protein_GI_number: 19554231 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Corynebacterium glutamicum # 8 118 1 111 116 125 59.0 2e-29 MTTCSRRLFLLGTATTFAGVYLAACGKEPSAEIAATEIPVGSAIIVDKVIFAQPTEGEFK AYSQTCPHQGSLITKIEGMTATCTSHYSSFDLSSGEVTGGPSPKPLTEYGVENNGGTIKN VSA >gi|227860890|gb|ACLH01000030.1| GENE 6 3345 - 4304 745 319 aa, chain + ## HITS:1 COG:Cgl2983 KEGG:ns NR:ns ## COG: Cgl2983 COG0385 # Protein_GI_number: 19554233 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Corynebacterium glutamicum # 1 317 3 317 326 390 69.0 1e-108 MIERLKRLDPLIVLILFAVAIAIVFPARGSFADGFDVFTNIAIALLFFLYGARLSTREAV NGIKHWKLHLTILAFTFVVYPIIGLALRPLTAFIPNDLYLGILYLTLVPSTVQSSVAFTS IARGNVPGAIVSASASNLAGVVITPLLVMALMGAGDGIHIDSSVFFEISVLLLLPFVLGQ LTRKWVGNLAASKATKVVDRGSIAMVVYAAFSKGMVDGIWASISVWQILFQIVFSTAFVF FMLWLTKIVSKKLGFSREDIIAIQFCGSKKSLATGLPMASVIFASGGTSLGLLILPLMIY HQVQLMICASMAARYARVE >gi|227860890|gb|ACLH01000030.1| GENE 7 4311 - 4619 533 102 aa, chain + ## HITS:1 COG:no KEGG:cauri_2519 NR:ns ## KEGG: cauri_2519 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 102 1 102 102 190 100.0 2e-47 MKKLYVRTTMTVPEVGTAIHIAELEEINAEACTMLRMIALAPNDAIVGAATPTASVGDAN IPQSVVPHPDTYDKYPDIDAELIDAFQFHSLWTEAIALYGDF >gi|227860890|gb|ACLH01000030.1| GENE 8 4757 - 4948 174 63 aa, chain - ## HITS:1 COG:no KEGG:cauri_2521 NR:ns ## KEGG: cauri_2521 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 77 100.0 1e-13 MPGGVTLGSIFAVLIPVGLVTVLLRWLPFGFVKALKGSQFISMLGFTMPVGVMTVLVVYT LFS >gi|227860890|gb|ACLH01000030.1| GENE 9 4933 - 5649 581 238 aa, chain - ## HITS:1 COG:Cgl3022 KEGG:ns NR:ns ## COG: Cgl3022 COG1296 # Protein_GI_number: 19554272 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Corynebacterium glutamicum # 1 230 1 233 237 262 59.0 3e-70 MRAEIIKAVRTCMPIAVGVVPLGLAFGVLMVQTGFDWWWTPIFSIVIYAGSMEFLAISMV TGGVTPAVAAVTGFMVNFRHIFYGLTFPRDEISSRLGRAYSTYALTDESYAVLSAFPRNS RPSGVFVFSVQLYCQVLWVGSGIIGAVAGQAIPPSVKGLEFALVALFIVLAIDSFQNNKD YSLPLSAAALGILASFLFPGQLLMVALSAYFVLLVVRYFSPRIDNALILRREPTCQAE >gi|227860890|gb|ACLH01000030.1| GENE 10 5685 - 6284 682 199 aa, chain - ## HITS:1 COG:Cgl3023 KEGG:ns NR:ns ## COG: Cgl3023 COG1678 # Protein_GI_number: 19554273 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Corynebacterium glutamicum # 2 192 5 195 201 237 58.0 1e-62 MYADRLFNALERNDPAPGQLLVAAPDVLAPHYNRSVILITEQHAGHTYGVDLTKRSEVAV FNVMPEWLPVVAKPQALYIGGPHNQQAAIGVALTKQGVDIEKQPALSRLAPRVALVDLRV GPDAVTELVEGMRFFAGHFEWGPGELDEEIDRGEWYVAPALPQDVVSSGSTDTWSDVMRR QAMPLPLFATFPRYIDEDN >gi|227860890|gb|ACLH01000030.1| GENE 11 6287 - 7720 1738 477 aa, chain - ## HITS:1 COG:Cgl3024 KEGG:ns NR:ns ## COG: Cgl3024 COG0617 # Protein_GI_number: 19554274 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Corynebacterium glutamicum # 4 474 17 488 494 657 69.0 0 MNFQDTQLIGVLARADATVSRLSGLLSGLVERFALHDAPLYLVGGSVRDALLGRLGNDLD FTTPARPDVVYSILEEWAETVWDTGIDFGTVSAAYKGQQIEITTFRSDSYDGQSRNPEVM YGDTLEGDLVRRDFKVNAMAIELRSDGTREFHDPMGGLDDLAKRILDTPDAPEISFHDDP LRMLRAARFAAQLEFDVAQRVRDAMIDMAGEIQRITVERVQVELNKLICGTAPWKGIDLL VDSGIADYVFPEIPALRMAPDEHAQHKDVYAHSLTVLRQAMEQEEEGPDLILRWAALLHD IGKPDTRDTTDGKVSFHHHEVVGAKLTRKRLRKLKFPKATTEDIGQLVYLHMRFHGFGDG QWTDSAVRRYVTDAGDLLPRLHKLVRADCTTRNERKARRLQRTYDQLEERIADIAAKEDL ARVRPDLDGNEIMEILGLEPGPEVGKAWSYLKELRLEEGPLEREVAIAKLREWWNSR >gi|227860890|gb|ACLH01000030.1| GENE 12 7749 - 8351 486 200 aa, chain + ## HITS:1 COG:Cgl3026 KEGG:ns NR:ns ## COG: Cgl3026 COG0494 # Protein_GI_number: 19554276 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 27 200 3 176 176 265 77.0 6e-71 MTKNTPGSKRRRRRGAGHRNHRTGRPQRTSTNRMTTRDETSAGGLVVSGLAEAVDEDGNV DLSQIYVALIGRLDRRGRLLWSMPKGHVENGEAKELTAEREVWEETGIHGKVFADLGMID YWFVSDGVRIHKTVHHHLLRFVDGIMNDEDPEVTEVSWIPVSELIEHLAYADERKLARIA HDLLPDLARKEAAAGKATPR >gi|227860890|gb|ACLH01000030.1| GENE 13 8348 - 10489 1445 713 aa, chain + ## HITS:1 COG:no KEGG:cauri_2525 NR:ns ## KEGG: cauri_2525 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 713 1 713 713 1251 100.0 0 MRWRAAAAIAALAVGCAVPVAQAQTPDTGITDSHYWLGSRGPDELELSLLSATEARVGET LKLQLRIHNPTESAVDDLQITSRRSTAVNSTTQARQELAAGSFPYYGATLGAGKLEPGES RELTVEVPTALGEDSTLAITEPGAYPLLFTLTGTRGGQAASFAEERTILDFQGEETAPDD EGEHSFSLVYPVTAEVDVVPGDTGGEELILESEQLAEQLSPGGRLDQLLDAYLQHDLHGS GCMALDPALVDAADRMSAGYTVNETRPSTAKHPTRLRDSWFSSADSDRGTPGAGAQDAAA WLEKLKKVDCRMLMPWANADTDAVAKVGNEWLTHEAVEQGADTIERILGAPLSTQLTAPA SGTSEHAMSVPLLVADNSEWAGKAATFDASLGALLAQTGSKPQTTGYSNPELRYDFSIDS EQARALTAGASISVASAQEETVAKLPNYQDPAAARSVMEAAQRLLDTGRLQPRPVTALEV EEGSGSPGSPYPDPSAFHDAEITQVTQQARYTDELMSIMVNDPSIAMTRYDFTAPLRHDL LTALSATGRSSLHGFPTSVTQSRSRLEKNADMLRELRASVSLIPPGNVYTRVSESSPLLI VAENGLPLPVDAHLAYDAPDGATLNTQNMIHIPAKGSITVSMTADLPSNADQTSLRLWLA TPSEHLISDPIDITVQTRAGIVSVYGVGAIAALALALAALFRLGKRKKKKSHG >gi|227860890|gb|ACLH01000030.1| GENE 14 10499 - 13741 3497 1080 aa, chain + ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 7 615 17 634 640 687 64.0 0 MTHEPMSGARRRIVTPSPPAPVPEKRAPSGVVAVDDELEDRSGLKGKSASTPSESAGEKN SDGAVVRATGSMAIATLISRITGFIRNVLIGSSLGPAISSAFTTANQLPNLITEIVLGAV LTSLVVPVLVRAEKEDADRGEDFVRRLFTLAFSLLATITVLSCIFAPQLTRMMLPEDGEV NAVQATSFAYLLLPQIFFYGLFALFQAVLNTKNIFGPGAWAPVVNNIISISVLVAYQLVP GSLHPDAPSPITDKHVLLLALGTTAGVVVQCLILFPYLKKAGINLKPLWGLDDRLKQFGG MAMAIVAYVAISQLGYVITSRVAAHADKGAPFTYQQAWLLLQVPYGVIGVTLLTAIMPRL SRNAADGDVKAVVRDLTLGTKLTFIALIPIVIFMTGFGIPIARGLFQYGAFDADAAELLG LTLSFSAFTLIPYALVLLHLRVFYAREEAWTPTFIIAGITLTKVVLSLLAPHVADSPERV VILLGTANGFGFVAGAVIGGFLLKRKLGSLGGRAVIATTVWSVLASIVGLVVAYAFNYGI NFVLPAEVPPFVYLLKLAVVGLVFVIVTGIVLSRSGLPEVINLGRQLQRIPGMSRFIKIE HAEAIEVEEPEQLEFQPIFSVDAFNSSPVPPPMSAGIVRGPRLVPGAPVSDGRFRLLKDY GSAPGTRFWKAREQATGRLVSLTFVDTTGEAPMAPATPAVAARRSAEVSRSTRRLAEMEL DAMAKNIDILSYRQGCLVVADWVEGTSLKTVSEDEDLDPRAVAHALAPLVRTTAAAHAAG LVLGIENRNRIRISTEGIATLAFPAVLHSNDEETDRSALASAISLLVESTSPTPEVLQEI ATDAEEGEDSDLEDIAHRLAAFAGDGDDGEETLQIPVEETPRKEDPSPAPGFGGRGYSGS GIIVLGVLATLFVVAMAALSVWILSQVGNEKTSPVVTKSESTTETTFPNVPPVLFKDVKT TSVPEGKEVSGSWSTKKADTGLLLSIDKPTQLRALPLQQSKSTGAKYEVYGVNTKDFDPT NPKAATLTELAHGTLTSARQDIELKEKPVAFDGALIVFTDMPKSGSVTLKEATLVGIPTN >gi|227860890|gb|ACLH01000030.1| GENE 15 13962 - 14495 906 177 aa, chain + ## HITS:1 COG:Cgl1144 KEGG:ns NR:ns ## COG: Cgl1144 COG2353 # Protein_GI_number: 19552394 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 176 1 177 179 198 66.0 4e-51 MTITAGTYALDAAHTTIGFVARHAMITKVRGNFNEFEGTLTVGENIADSAATATVKTASI DTKNADRDAHVKGEDFFDVEKFPEMTFTATKFDVNEAGEGTVTGDLTIKGTTKSVDFKVD EAGVAEDPFGNTRLGFEAKTSINRLDFGIDFNAPLKTGGVLVSEEIKIELEVSAIKQ >gi|227860890|gb|ACLH01000030.1| GENE 16 14659 - 17187 3333 842 aa, chain + ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 1 833 1 855 861 556 39.0 1e-158 MTTANLTHAEATARSAALRLSTYELHLDVTSAPTDADSYEVTSRITFTTTEPETFVDYLG KAVHAVRVNGEKVENTFDGGRVYLSNLPVGEELTVEITGSSYYSRTGQGLHRMHDQADDT TYLYSHLEPSDARRIFPCFDQPDLKASYAVHLTGPQGWQLLSNQPEVGREKTEGGEVAHF APTPLLSTYLTAFAAGPYVEKHSTWTAPDGSLEVELRAFARASMAEYLDDEILQVTAQGM DFFHSSFGYPYPWGKYDSIFVPEYNLGAMENPGLVTFTEHYLFRSAATRAQHAGRTNTIL HEMSHMWFGDLVTPQWWDDLWLKESFAEFMGADSSVHATEYAEAWVNFAGQRKNWAYLQD QLPTTHPIKAEILDVDAARQNFDGITYAKGAAVLKQLVHYVGRENFYAGARDYFQEHAFA AATFDDLLKALKKHTDRDLDAWSTAWLRTWGPDTLTPELHADGDKIHELAIAVEAEDTTR PHRLNVTLFDNSLNKYATLDVDLEGERTILDEASGLQAPALLLLNDGDHTYAKVRFDETS LETIRTRLSAVPDELSRAVIWTSLWNLTRDGEWPVRSYLDTVLNHAPAESNPTLLTTAFA NASYAIDHFVGEGVREEIRADYAERLWEVLQKAPDGSDAQLTFARAAIQALAATPEESGT QRLRALYDGSLDGLALDPDIRWAILRALAARDAVSAEELEAEKERDNTLTGAAAYLGASH AFPSAELKREVFDLVRTPGKYSNAEVDSLLAAFNAPRSAHLTEAFAQEYFDSLAKLWEEH PIEIANRLVRGLYPDLAMADAATSDFLSSERPRALRRVLLECQDALRRAQRVRACRAVIA AR >gi|227860890|gb|ACLH01000030.1| GENE 17 17327 - 17869 320 180 aa, chain + ## HITS:1 COG:Cgl3029 KEGG:ns NR:ns ## COG: Cgl3029 COG1595 # Protein_GI_number: 19554279 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Corynebacterium glutamicum # 6 179 42 215 232 156 46.0 2e-38 MSAQPTDRELVDAFIGGDTKAFSAIVEKHRARLTAMARRYTRNDDDAQDIVQEALLKASC NMASYRHDATLSTWLHRLVMNSGYDFLNHRSNRENASLDAEIIEDDRNYALAHNPSENLA ERITVAQAMETLRQDQREALYLTDVAGYPIDTVAKVQGVAPGTVKSRRARARQVLRAAID >gi|227860890|gb|ACLH01000030.1| GENE 18 17924 - 18850 750 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 3 299 1 298 306 293 48 1e-78 MTIHDVAIVGSGPAGYTAALYAARAELNPIVFEGFEYGGELMNTTEVENYPGFQKGIMGP ELMEEMRAQAIRFGADLRMEVVDSVELEGEVKKLHVGDEVYEARAVILATGAAPRYLGIP GESELTGRGVSACATCDGFFFKDHNIAVVGGGDSAMEEATFLTKFAETVTIIHRSENFRA SKIMLERAKENPKIKWLTNTTVERVLEKDGKVGALEVKNVLTGETSELDLTAMFVAIGHD PRSGFLNGQVETDEAGYVVVEQPSTKTSLPGVFACGDLVDDHYQQAITAAGSGCRAAIDA EHFLAENR >gi|227860890|gb|ACLH01000030.1| GENE 19 18858 - 19181 380 107 aa, chain + ## HITS:1 COG:Cgl3031 KEGG:ns NR:ns ## COG: Cgl3031 COG0526 # Protein_GI_number: 19554281 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 107 1 107 107 138 64.0 2e-33 MRNIKNVTTDSFRADVVEAGKPVVVDFWAEWCGPCKKLSPILEEVAEELGEDVSVVKVNV DEERTLGAMFQIMSIPSVLIFKDGEKVDEFVGLRSKADIVAQVKKQL >gi|227860890|gb|ACLH01000030.1| GENE 20 19247 - 20431 1345 394 aa, chain + ## HITS:1 COG:Cgl3032_2 KEGG:ns NR:ns ## COG: Cgl3032_2 COG0860 # Protein_GI_number: 19554282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Corynebacterium glutamicum # 160 393 1 235 236 334 70.0 2e-91 MNRVLRVGDQSVRVAEARATLARLGLMTDYQGTLSDWKKQKYSEADKHFDSELAEVLKAF QQSRGIVPSGDIDELTLRELRQASYTLGARVLAYEPGNVQVGDDVSQLQQQLQELGFYQE RIDGNFGARTYAALAEYQLNSGLRSDGICGPETINALNLLGRRITGGSAHNIQERERVRN AGPQLAGKRVVIDPSLGGFNKGRTVKGRFGDITEEEILWDLAERVAGRMIAAGMETIISR PRTDDPSIHDRADIANAFGADLVISLACDEYPTEKANGVATFYFGSESGNSSLIGETLSG FIQREIVARTELGNCRNHGRTWALLRLTQMPVVQVVLGYLTSPKDVAVLTNPDRRDDIAE AIVVSVKRLYLLDDDTAVTGTYRFDELLRAERSS >gi|227860890|gb|ACLH01000030.1| GENE 21 20591 - 21166 657 191 aa, chain - ## HITS:1 COG:no KEGG:cauri_2533 NR:ns ## KEGG: cauri_2533 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 191 1 191 191 341 100.0 9e-93 MFVQAVTEGVAINPLAARSIFWELKTTVADPAFEKEAWISATLLRCGECGFTVGDEATVF FCPPDLAPGAAKLPTSPVSEDAVLVSSLFVKSHRAAKGLEAVLLDATIMHLTSREASAVE AFGYRGAQAAEDLLRDKPGRIGLLPVETLESAGFMVVRDHPITPRLRLELPPAFDLLTAA AVEDLLARALA >gi|227860890|gb|ACLH01000030.1| GENE 22 21173 - 22228 1316 351 aa, chain - ## HITS:1 COG:Cgl3034 KEGG:ns NR:ns ## COG: Cgl3034 COG1475 # Protein_GI_number: 19554284 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 1 348 1 379 379 351 57.0 1e-96 MADKKAEQKPEQRQGGLGKGLAALIPSGPGAPSRKPRLGDSAADIILGASTGGAHGSAPK KVQGAPTIQQSSGSKKRQAKPSVIGATYREISVGDIMPNPKQPRTVFDEDDLAELVHSIK EFGLLQPVVVRPAEEGGFELIMGERRWRASSKAGLATIPAIVRDTKDDDLLRDALLENIH RVQLNPLEEAHAYQQLLEEFGVTQNELADRIGRSRPQVTNMIRLLKLPVSVQKRVAAGTL SGGHARALLGLPDAEAMELIANRIVAEGLSVRATEEAVTLYKRDGKPAEPTKKPAAPQPQ FFTDSAERLADRFDTKVTVTMGKRKGKMVVEFGDQEDFERILALIEGKESS >gi|227860890|gb|ACLH01000030.1| GENE 23 22235 - 23083 1054 282 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 4 274 35 305 307 399 73.0 1e-111 MTHPRLITIANQKGGVGKTTSAVNLAAALAEAGKKVLVIDLDPQGNASTAVGAEHTSGTK SSYEVLLGDCSAEDAMQHSPDNENLYCIPATIDLAGAEIEMVSLVRREFRLYDALHNGFL EEHGFEYVFIDCPPSLGLLTINAMTCAEEVIIPIQCEYYALEGVGQLLGNISMIREHLNE DLHISGVLLTMFDARTKLAEQVANEVREQFGAVVLGNVIPRSVRVSEAPGYGKTVIAYDP SSTGARAYSAAARELDKRGDYTPHPTTGAIGVSPEIFAELEG >gi|227860890|gb|ACLH01000030.1| GENE 24 23094 - 23723 686 209 aa, chain - ## HITS:1 COG:Cgl3036 KEGG:ns NR:ns ## COG: Cgl3036 COG0357 # Protein_GI_number: 19554286 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Corynebacterium glutamicum # 8 207 2 207 209 249 65.0 3e-66 MTESVSDTVPLDPSDVFGSRLPLAQKYHDSLATDGSTRGFIGPREVPRLWERHLINCAVV AEVMPEGATLIDVGSGAGLPGIPLAIARPDLNITLIEPLLKRSTYLNEVVDLLGLDNVTV IRGRAEEGPVKKAVKGADIVTSRAVAPLGKLAKWSLPLVRKSGEMIALKGSSVHEELERD AADIKRAGGGKAEVMTIHGTTIIRVPRVN >gi|227860890|gb|ACLH01000030.1| GENE 25 23747 - 24736 1486 329 aa, chain - ## HITS:1 COG:Cgl3037 KEGG:ns NR:ns ## COG: Cgl3037 COG0706 # Protein_GI_number: 19554287 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Corynebacterium glutamicum # 1 323 1 317 317 289 49.0 4e-78 MLNFIYWPISAVLWFWHWLLSFVLDSAWGGTWIIAIVLLTWTLKAIMVKPTITQLRSSRK MQEIQPQIQELRTKYANDQTKAAQEMQRIYKESGVRPVAGCLPMFAQIPMFIGLFHVLRS FDRTVAVAGGIGHPAGEAMSEEMNASIANYIFEPELVKQFVDAKIFGVPLVANLRLNSGL EIVKETTTMQAAVIIVPLIAIIAVLTHFNARMTLNRQEARRAAGKTATPQGQNAEMMQQQ MAMMNKMMLWFMPAMLVFSGFIWPIGLLFYMLANTVWTFFQTRIVYAKMDREEEEEAAAK AELKRTSAPKPGARKKDNRSKKQRRKNNN >gi|227860890|gb|ACLH01000030.1| GENE 26 24746 - 25024 201 92 aa, chain - ## HITS:1 COG:lin1778 KEGG:ns NR:ns ## COG: lin1778 COG0759 # Protein_GI_number: 16800846 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 19 89 3 72 88 80 54.0 6e-16 MGYLNSQGEEIPEARGFGRVLVHGVRFYQKHLSGLKMVSTCRFDPTCSAYALEAISIHGA LKGSGMALARLCKCGPWHPGGFDPVPTKQQLR >gi|227860890|gb|ACLH01000030.1| GENE 27 25012 - 25380 203 122 aa, chain - ## HITS:1 COG:Cgl3038 KEGG:ns NR:ns ## COG: Cgl3038 COG0594 # Protein_GI_number: 19554288 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Corynebacterium glutamicum # 1 117 1 123 133 110 55.0 8e-25 MLPAQHKLTSPRQFRRTIKGGRRAGTRTVVVHLRFNDGEDAIAATGPRFGLIVSKAVGNA VVRHRTSRRLRHVCMSLMRDGVKGTMLPANVDIVIRALPASGEATSERLERDIRKALSTW DI >gi|227860890|gb|ACLH01000030.1| GENE 28 25384 - 25527 232 47 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227490374|ref|ZP_03920690.1| 50S ribosomal protein L34 [Corynebacterium pseudogenitalium ATCC 33035] # 1 47 1 47 47 94 97 1e-18 MAKGKRTFQPNNRRRARKHGFRTRMSTRAGRAIVAARRKKGRAKLTA >gi|227860890|gb|ACLH01000030.1| GENE 29 26327 - 27967 1680 546 aa, chain + ## HITS:1 COG:Cgl0001 KEGG:ns NR:ns ## COG: Cgl0001 COG0593 # Protein_GI_number: 19551251 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Corynebacterium glutamicum # 1 545 1 523 524 624 65.0 1e-178 MSDPQAALRASWKAVVSDLLAQSEQPNSDVPNFSHSQRLNLQLVEPIMIGDGYALIAAPH ENAKTVIETELGEYITRALSQHMGRPCSLAVTIAAPPQPAPQEEPPAPAPQRPIQTEAPE HGMGHQTQAFQQPTQSTQPAPASQPETPNHHQPRSWEAAHSPASLDELAQHYSEQQSTAP SGYPEATGARIPREEPAHNPNREKSLNPKHTFENFVIGSSNRFANGAAVAVAENPARAYN PLFIWGGSGLGKTHLLHAAGNYAQVLHPGLRVKYVSSEEFTNDYINSLRDDRQESFKRRY RNLDILMVDDIQFLEGKESTQEEFFHTFNALHQANKQIILSSDRPPKQLTTLEDRLRTRF EGGLITDIQPPDLETRIAILMKKASADGTDVDRSVLELIASRFESSIRELEGALIRVSAY SSLVNEPISLEMAEIALHDLAPDSADRQITAAAIIEVTADYFNIDVDTLRGSGKKRAVAH ARQLAMYLCRELTELSLPKIGDQFGGKDHTTVIYADRKIRKEMTENRNTYDEIQALTQRV KNHNQR >gi|227860890|gb|ACLH01000030.1| GENE 30 28391 - 29725 1361 444 aa, chain + ## HITS:1 COG:Cgl0002 KEGG:ns NR:ns ## COG: Cgl0002 COG0592 # Protein_GI_number: 19551252 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Corynebacterium glutamicum # 54 444 4 394 394 526 68.0 1e-149 MCDSLAPGLTARPYREAQKVNDKILCFDADPVSWSELARIFHPQLEERLTTMEQSVSFRV AKDDLANAVAWVARSLPSKVTQPVLRAMLITADDNGLEFTGFDYEVSTRVRIAGMVDEPG RIAVAGKLLSDIVASLPNKEIEMTQEDNKVLLICGSSRFELPLIPLDDYPQLPVLPEVTG TINPQLFVEAISQVVAAAGKDDTLPMLTGVHIDINGSHVEMTATDRFRLAMRTFEWEPVS SDVQAKLLVPAKTLQETGRSLDTHLNIPVEIAVGTGENIAAEGLFGLHADNRETTTRMLD ADFPNVAPLLPKTHSAMASIEVAPLQEAIRRVSLLTDRNAQIRMEFSEGEVTLAAGADSG RASETLPCAFNGREDFVIAFNPSYLKDGLAVVHTNRVVFGFTEPSRPAIMIPEPEELPAA NEDGSFPTPETDFTYLLMPVRLPG >gi|227860890|gb|ACLH01000030.1| GENE 31 29731 - 30909 1012 392 aa, chain + ## HITS:1 COG:Cgl0003 KEGG:ns NR:ns ## COG: Cgl0003 COG1195 # Protein_GI_number: 19551253 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Corynebacterium glutamicum # 1 379 1 388 394 521 70.0 1e-148 MYIRDLDVRDFRSWPELTLRLKPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVAHDAPL VRQGAHNARISATAVNQGRELTAHLLIKPHAANQAQINRTRLKSPRELLGVVKTVLFSPE DLSLVRGEPAARRQYLDDIIASRTPRLAGVKADYDKVLKQRNALLKSASPSLRRGYSDSD GASALATLDVWDTQLSSLGAQVIQARLALVDELRELIPAAYAGLAPESRPAAIDYKSTVD ISDREVIEAMMLTELATKRQREIERGISLVGPHRDDLVLNLGTSPAKGFASHGETWSYAI SLRLAEFNLLRQDGTDPILILDDVFAELDAKRREKLVRLAAGAEQVLITAAVDEDLPGNL QPIERFTVTVRDTDEGRISEIAPYTAGGDEDD >gi|227860890|gb|ACLH01000030.1| GENE 32 30896 - 31444 380 182 aa, chain + ## HITS:1 COG:Cgl0004 KEGG:ns NR:ns ## COG: Cgl0004 COG5512 # Protein_GI_number: 19551254 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Corynebacterium glutamicum # 9 182 3 178 178 126 42.0 2e-29 MKMTEQDFDPVKALFERTRSNSKNPPKLNKPAPKMNVAPTSSEKQPKPYQRGRPSGPDGR RRRRSLEIPSLGAQIQREIGKRGWEHELAHGWVMGNWENLVGERIAAHTQPLTIKEQVVY VACDSSSWATELRYLQRPILQKIADRLGPDVVVKLHIQGPKQHRNYEGRQWVKPQGSQDT YG >gi|227860890|gb|ACLH01000030.1| GENE 33 31575 - 33620 2635 681 aa, chain + ## HITS:1 COG:Cgl0005 KEGG:ns NR:ns ## COG: Cgl0005 COG0187 # Protein_GI_number: 19551255 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Corynebacterium glutamicum # 4 681 5 684 684 1049 78.0 0 MAEQHAYDAGSITILEGLEAVRKRPGMYIGSTGARGLHHLIWEIVDNSVDEAMAGYADKV IVTLREDGGIEVIDNGRGIPVEMHASGVPTVQVVMTQLHAGGKFDSESYAVSGGLHGVGI SVVNALSTRVEADIKRDGKHWYQNFNNAIPDELVEGDNARGTGTTIRFWPDPEIFETVEF NYDTIARRLQEMAFLNKGLTIVLRDERAISKEQAELEEIAEAGDSAVSLTSLDEKEKSEE AGDGSEEKTSKKKEVTYHYPNGLQDYVEHLNKNKTAIHPTIVAFDVKGEDHEVEIALQWN QGYKQSVHTFANTINTHEGGTHEEGFRAALTSLMNRYAKEHKLLKEKDGNLSGDDCREGL AAVISVKVADPQFEGQTKTKLGNSEIRGFVQRSVNEHLNDWFDANPAEAKVIINKAVSSA HARVAARKARELVRRKSAGDLGGLPGKLADCRSKDSKRTELYIVEGDSAGGSAKGGRDSM FQAILPLRGKILNVEKARMDKVLKNAEVQAIITALGTGIHEEFDISKLRYDKIVLMADAD VDGQHIATLLLTLLFRFMPQLVEDGHVFLANPPLYKLKWGKGQPGYAFSDAERDEQLAEG LEQGRKINKDDGIQRYKGLGEMNAAELWETTLDPTTRVLRRVDLEDAQRADELFSILMGD DVAARRSFITRRAKDVRFLDV >gi|227860890|gb|ACLH01000030.1| GENE 34 33693 - 34139 487 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_0006 NR:ns ## KEGG: cauri_0006 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 236 100.0 2e-61 MTNLTQLLQSPTRNAVVADLATDADDTVSSLSGISGMAFKGALAAAKKADSKVLSKGINQ MLPELLNSLDAYWKEFEGSEQSDFGTYLDGRSAEVTEVIMNTADKAAEDVKAPGIARTYK SLRGKASSILEPNVATIGRVLQRHMGTV >gi|227860890|gb|ACLH01000030.1| GENE 35 34150 - 34596 569 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_0007 NR:ns ## KEGG: cauri_0007 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 212 100.0 3e-54 MPSKSLKKFLAAGLVATTLATAATPAASAKTADNNWQNNLNPDFEQGEAGSSLTGSTPID MTLIIGGSIAAAAALLKLVVDNVPALRAQVDEFAAQIGMAGSSGSSENNRLYEGGPDFDL ERLARTNGFPEIADQIAALKAGSSAPAQ >gi|227860890|gb|ACLH01000030.1| GENE 36 34647 - 34907 141 86 aa, chain - ## HITS:1 COG:no KEGG:cauri_0008 NR:ns ## KEGG: cauri_0008 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 117 100.0 2e-25 MNAEQLLLIARDFCQAYRVRVINFAALTAAAAASTATVEGIAVHGNRSAAAESLETVLRA VPALSGKNEEFARFCAEVYLSVAEVM >gi|227860890|gb|ACLH01000030.1| GENE 37 34904 - 35164 192 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183103|ref|ZP_06042524.1| ## NR: gi|262183103|ref|ZP_06042524.1| CopG family protein [Corynebacterium aurimucosum ATCC 700975] # 1 86 1 86 86 97 100.0 2e-19 MAQQWYHSDTIRAMAMTLRLTPEQDHALTLLASAQGTSKHEAVVRAIVAAAARALSDAAV QDTARRLLPGRAELEAEIRQARGGRQ >gi|227860890|gb|ACLH01000030.1| GENE 38 35205 - 37793 3497 862 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 1 829 1 829 856 1377 84.0 0 MSDNNGDLFDRIQPIDINEEMESSYIDYAMSVIVGRALPEVRDGLKPVHRRILYAMYDSG YRPDRGYVKSARPVSDTMGQFHPHGDSAIYDTLVRLAQPWNMRYPLVDGQGNFGSRGNDG PAAMRYTECRMTPLAMEMVRDIRENTVDFAPNYDGKTQEPTILPSRVPNLLMNGSGGIAV GMATNIPPHNLNELAEAIYWLLDNPNASEEEALAACMERVKGPDFPTAGLIVGDQGIKDA YTTGRGSIRMRGVTSIEEVGNRQTIVITELPYQVNPDNMISNIAESVVNGKIAGIAKIED ESSDRVGMRIVVTLKRDAVARVVLNNLYKHSQLQTSFGANMLSIVDGVPRTLRLDQMLSY YVAHQIEVIVRRTQFRLDEAEKRAHILRGLVKALDMLDEVIALIRRSPTVEEAREGLMQL LGVDEIQADAILAMRLRRLAALERQKIIDELAEIEEIIADLKDILAREERQREIVHDELE EIVEKYGDERRTQIVAASGDVSDEDLIARENVVVTITATGYAKRTKVDAYKAQKRGGKGV RGAELKQDDIVKNFFVCSTHDWILFFTNFGRVYRLKAYELPEAGRTARGQHVANLLEFQP EEKIAQVIQIQSYEDAPYLVLATQQGRVKKSRLTDYESARSAGLIAINLNEGDALIGAQL VNEGDDILLTSEQGQAIRFTADDDQLRPMGRATAGVKGMRFRGDDQLLSMSVVSDGQFLL VATSGGYGKRTAIEEYTPQGRGGLGVMTFKYTPKRGKLIAAISVDEDDEIFAITSAGGVV RTEVNQIRPSSRATMGVRLVNLADDVELLAIDRNVEDDGEEDAQAVAKGEKSVEDVKPEH LKLGEDSQQDEAGSKDADKDEE >gi|227860890|gb|ACLH01000030.1| GENE 39 37797 - 38144 406 115 aa, chain + ## HITS:1 COG:no KEGG:cauri_0010 NR:ns ## KEGG: cauri_0010 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 115 1 115 115 177 100.0 1e-43 MIGRELHLARISPMSAFRVGLAMSLVGLVAWLIAVCLLYVGLDQAGIWDSFNSLVGGVGG GFEVSFGLVVSAAALFGAIIAVLMTILAPIMAVIYNAIVDVFGGFKIRLQDEPHN >gi|227860890|gb|ACLH01000030.1| GENE 40 38481 - 38747 102 88 aa, chain - ## HITS:1 COG:no KEGG:cauri_0011 NR:ns ## KEGG: cauri_0011 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 88 1 88 88 175 100.0 6e-43 MLYSVAGPILPFASAQTAPSTDNADVITPYSINDDIDWGTAQPFEAEWQCRAEAVKRNLT PEFKFDFEFDTGYWRCTKHFSIWILHYK >gi|227860890|gb|ACLH01000030.1| GENE 41 38833 - 39060 239 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183106|ref|ZP_06042527.1| ## NR: gi|262183106|ref|ZP_06042527.1| hypothetical protein CaurA7_03867 [Corynebacterium aurimucosum ATCC 700975] # 1 75 1 75 75 140 100.0 5e-32 MDNDLGDEDFIKGLASILSELDREQFPVTFFWLSSLIHEVEDLSKAGEQLTVKRLAFNLV PVIGRLESEYRGKEI Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:17:15 2011 Seq name: gi|227860889|gb|ACLH01000031.1| Corynebacterium aurimucosum ATCC 700975 contig00086, whole genome shotgun sequence Length of sequence - 28474 bp Number of predicted genes - 28, with homology - 25 Number of transcription units - 12, operones - 4 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 75 - 124 -0.2 1 1 Tu 1 . - CDS 185 - 1063 949 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 1252 - 1311 76.1 + TRNA 1235 - 1307 82.2 # Ala CGC 0 0 2 2 Op 1 . - CDS 1352 - 1843 532 ## cauri_0014 putative N-acetyltransferase 3 2 Op 2 35/0.000 - CDS 1867 - 3522 241 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Term 3590 - 3617 -0.1 4 2 Op 3 . - CDS 3657 - 5231 1473 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 5 2 Op 4 . - CDS 5304 - 5507 323 ## cauri_0017 hypothetical protein - Prom 5591 - 5650 1.8 - Term 5541 - 5587 0.0 6 3 Tu 1 . - CDS 5674 - 6549 1350 ## cauri_0018 hypothetical protein 7 4 Op 1 9/0.000 + CDS 6889 - 7812 899 ## COG0685 5,10-methylenetetrahydrofolate reductase 8 4 Op 2 . + CDS 7809 - 10073 3266 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 10075 - 10110 0.6 9 5 Tu 1 . - CDS 10070 - 10738 516 ## COG1011 Predicted hydrolase (HAD superfamily) 10 6 Op 1 1/0.000 + CDS 10808 - 11338 923 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 11357 - 11404 14.0 11 6 Op 2 . + CDS 11410 - 12054 627 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 12101 - 12138 5.3 - Term 12092 - 12124 4.2 12 7 Tu 1 . - CDS 12171 - 12431 95 ## - Prom 12627 - 12686 1.8 13 8 Op 1 . - CDS 12975 - 13220 207 ## cauri_0024 hypothetical protein 14 8 Op 2 . - CDS 13272 - 13925 640 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 15 8 Op 3 . - CDS 13935 - 14147 311 ## cauri_0026 putative secreted protein 16 8 Op 4 . - CDS 14199 - 15275 807 ## cauri_0027 hypothetical protein 17 8 Op 5 . - CDS 15291 - 15566 462 ## cauri_0028 putative septation inhibitor protein 18 8 Op 6 7/0.000 - CDS 15635 - 17575 2197 ## COG0515 Serine/threonine protein kinase 19 8 Op 7 4/0.000 - CDS 17582 - 18994 1371 ## COG0515 Serine/threonine protein kinase 20 8 Op 8 19/0.000 - CDS 18994 - 20424 1498 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 21 8 Op 9 4/0.000 - CDS 20421 - 21773 1882 ## COG0772 Bacterial cell division membrane protein 22 8 Op 10 7/0.000 - CDS 21774 - 23099 1372 ## COG0631 Serine/threonine protein phosphatase 23 8 Op 11 5/0.000 - CDS 23096 - 23548 452 ## COG1716 FOG: FHA domain 24 8 Op 12 . - CDS 23593 - 24417 1000 ## COG1716 FOG: FHA domain - Prom 24633 - 24692 80.3 + TRNA 24608 - 24692 70.3 # Leu CAG 0 0 + Prom 24610 - 24669 80.3 25 9 Tu 1 . + CDS 24828 - 24959 56 ## + Prom 25529 - 25588 4.4 26 10 Tu 1 . + CDS 25617 - 26927 1145 ## cauri_0036 putative secreted protein 27 11 Tu 1 . - CDS 27128 - 27415 83 ## 28 12 Tu 1 . + CDS 27928 - 28474 334 ## cauri_0037 hypothetical protein Predicted protein(s) >gi|227860889|gb|ACLH01000031.1| GENE 1 185 - 1063 949 292 aa, chain - ## HITS:1 COG:lin0436 KEGG:ns NR:ns ## COG: lin0436 COG0726 # Protein_GI_number: 16799513 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Listeria innocua # 100 292 268 459 466 142 41.0 8e-34 MRRKSVLVRSLIALAAATALPGTAAAAELPQPVIQQPQLPQLPDVQKDLKQLEQDAYDAL PKELQNSPVFAGSSRPTAKPAPTGKQQSQSVADSTCSNCVAITYDDGPGELTAQLLDTLK AKDAHASFMVLAPSASTHPELLRRMKAEGHTVGNHTASHRELNKLSPSDVDGEIKAGAAA IKAATGENPRWMRPPYGATNGTVEAAAKANGQAQALWSVDTVDWKDRNSEHVCEAAVNGA QPGSIVLMHDIHATTVGAADCVIDGLRAKGLEPVSLDRLIPNPQAGKHYLTR >gi|227860889|gb|ACLH01000031.1| GENE 2 1352 - 1843 532 163 aa, chain - ## HITS:1 COG:no KEGG:cauri_0014 NR:ns ## KEGG: cauri_0014 # Name: not_defined # Def: putative N-acetyltransferase # Organism: C.aurimucosum # Pathway: not_defined # 1 163 1 163 163 317 100.0 1e-85 MGAMHLLSLTEADRTYLARINFLADTFGDEHKELPTGFEEGFDYYLGGWEPSRGGFIAWE GHVPAGGVWLNWGTAQRHGFGHVAEGIPELALAVEPRFRGQGVGTMLIDAAANLAREMGA PGISLSVAKDNDRAHRLYLHLGFEPVSERDGHIVLVKRFKAAE >gi|227860889|gb|ACLH01000031.1| GENE 3 1867 - 3522 241 551 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 302 537 120 359 398 97 30 9e-20 MMNLVSQVLGRVVDIIQGVEIPVLGTGRSAMLGALVVIAVGYLVEVTGRTVGRYLVTSTT RRLSVDLRTSALDSTLGAPVPAVMELGTGNIITRLSKDIDTVVMTISMMGDRLVLTLFML PLTALMMVFIHPAYALLFIAVSCLLYPFIRGTMRDIPAIANEVSSVEAYRNNVLLDTIRA LETLRQFSLKDWAHARMERYSWDTVQAWGDKVPLINRILGQGALAFAVLLLGSVLMSVPM VMWEWLTPGEATAAVLLVMRLEIHVFNILFFAGEIQHSVTSLGRAVALATLESSAGTKEL KDTPRLTSAPAITIDHLSYAYPGGARVLDDVSLTLSAGTTTALVGTSGAGKSTLAALVAG LQYPTKGTISLDGIDTATVPNTWITEHVALITQEVHLFSGTLREDLLLAKPDASDEELWQ ALNTVGLDEHSRWLPQGLDTKIGAGNEEIGAEAEQQLSLARMILRQPPVLIMDEATSEAG SEHAEVLEHAARAVTRGRTALVVAHRLDQAREADRIIVMEQGQIVEDGTHSELMDLGGRY ASAYAQWEHGK >gi|227860889|gb|ACLH01000031.1| GENE 4 3657 - 5231 1473 524 aa, chain - ## HITS:1 COG:Cgl1489 KEGG:ns NR:ns ## COG: Cgl1489 COG1132 # Protein_GI_number: 19552739 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Corynebacterium glutamicum # 7 521 1 520 529 441 48.0 1e-123 MTHYPRMRTWSWYLPDEPPSGEVSLTETTDFSRPGAATWRLLGAQRTGVIGIFVATLINA PLGALVSVIIGQTTQYAFSDPSWSTVALPLAATAILLFIAYICEATADAFTDLSQARTTH TLRLNLLDKLLGASTAGISPGRLLNTMDEDSHYIGQLKQILNFPLVMVGYLLGAVVSLAP ISWQVSAVLLVGAFATALASWATTKPLTKIAARRRQLENTALSLATDFAQGSRVIKGLGA KEISRQRFSDAAQDSLGAMLREAKLSSLMAWLRQMVPASFAVGILAWSSWETFEGRIAPG GMMAITMLVPPALTALGVSLGLLTENWARARASVERVGKLLGQLSTNTTEAAGTPVELSP GLHVWMPTTTEGRNTVDSWVRYLHEHGALCPPHRISVLEGTLQDNVDPLRSASATQLHDA LHASACEDIVIRLGGFGPHGELPTAPIGEAGLNLSGGQRQRVALARALAVDPEVLVLDNP TTGLDSLTLADVAKHVRELRAGKTTVIITSASTWAANADEVVEL >gi|227860889|gb|ACLH01000031.1| GENE 5 5304 - 5507 323 67 aa, chain - ## HITS:1 COG:no KEGG:cauri_0017 NR:ns ## KEGG: cauri_0017 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 67 1 67 67 122 100.0 5e-27 MSFESLIVKLKSGDTFYFPAGAVSGDPSTRVDNLRFAIENGTQFSSVDDFGVDREFNGYD VENYHLA >gi|227860889|gb|ACLH01000031.1| GENE 6 5674 - 6549 1350 291 aa, chain - ## HITS:1 COG:no KEGG:cauri_0018 NR:ns ## KEGG: cauri_0018 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 291 1 291 291 280 100.0 6e-74 MNPAALSTAISATSALVERLKERRDEKAREAYSVLETAAARMEERDGEWFPEARREAGAV TKAAHARLERTLEQLKERSEEATEKLSAAASEAQDKASKQWEKTQKQAEKKASKARKQAK KKASKAEKKAQKQSAQLQKKARRISGKDKKKGSKIWLISALVAAIAAIGGGIYYFFTQKK EKESTVPPRVEDFSSPSAPQGSTLVYTSTTEDDAKKESDLAEEGVVERDEELLGSLDEQL AKHREEETAIQDAVETEIEVSNADKKDADTSRITDDHESEGKHRLQTEDEN >gi|227860889|gb|ACLH01000031.1| GENE 7 6889 - 7812 899 307 aa, chain + ## HITS:1 COG:aq_1429 KEGG:ns NR:ns ## COG: aq_1429 COG0685 # Protein_GI_number: 15606607 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Aquifex aeolicus # 26 303 13 287 296 164 32.0 2e-40 MSPRLSASAPLDQISEDTPKELKRTALSFEVIPPRHDADAAKIDRLLATLAAYNPDYIAV TSSQRSGWLEGTAAFIEKISRDTAMRPLAHLACTAGTEEELVGWIDTLVDAGVRGLLALR GDLPEGGMPEGHLPHADSLVRLIRRWESDRVARLAAGRLAVGVACYPNGHAESATPDEDI DVLLAKQRLGADFAITQLFFDAEDYVRFAQRARLAGVRIPLIPGIMPMTSRARVERMCQL SGLAGPTKVLDQLAAATSPEEEKEIGMQITASLAKSVMNAGADGLHIYTHNNPDITTDLL NRIGVTP >gi|227860889|gb|ACLH01000031.1| GENE 8 7809 - 10073 3266 754 aa, chain + ## HITS:1 COG:MT1165 KEGG:ns NR:ns ## COG: MT1165 COG0620 # Protein_GI_number: 15840571 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Mycobacterium tuberculosis CDC1551 # 4 752 9 758 759 684 51.0 0 MTAPFPKATIEGYPRVGAHRELKRALESYWSGKIDAETFESAAHSLRLDTYARLKELGLT EDYAIPADVAYYDHVLETALTVGAAQGESLDNEFTLARGNKDTAPLEMTKWFDTNYHYIV PEITDEQAFSARPQRVLKIVEEARAAGYTVRPVLVGPVTLLALSKQAEGATKQPLDHLNE LVDSYLTVLAELHDAGVEWIQLAEPALVADLAAADDATLAAALKTAYGRILSAEKRPQVY LTTPYGSLNAGLDVITELQPEAVQVDLSVGTLALDNSYLERVAKLAEATHLSAGLVDGRN VWAANLRDLREKFETLGDNVSVTTSVSLQHVPHTVEAETSLPVDVATWFAFADEKIREVV ALSAGPLDAPEAYAQADRAVRTRAESSRTHDQAVQDRTAQLPEGQVQRQPEFAERNKAQE ALGLPQLPTTTIGSFPQTAEIRAARAAHRKGELSDADYTEALRNEVKSVIELQERLGLDV LVHGEPERNDMVQYFAELLDGFVVTENGWVQSYGSRCTRPPIVVGDISRPKAMTTEWAKF AQSLSEKHVKGMLTGPVTILAWSFVRDDVHQSVSADQLGVALADEVCDLEEAGIDIIQID EPALRELLPLREKDRKAYLDWAVRSFRVVSLQAKPETQIHTHLCYSEFGQIIDAVAGLDA DVTSIEAARSRMELLEDIDEKFHSEIGPGIYDIHSPRIPSVAEMAELIRAALKNVPVERL WVNPDCGLKTRGYEETEASLRNMVLARDEVRASL >gi|227860889|gb|ACLH01000031.1| GENE 9 10070 - 10738 516 222 aa, chain - ## HITS:1 COG:Cgl2850 KEGG:ns NR:ns ## COG: Cgl2850 COG1011 # Protein_GI_number: 19554100 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Corynebacterium glutamicum # 1 206 1 210 212 134 41.0 1e-31 MIRAILFDLDDTLMDHTAAMHAAVEEWLPGGHHERFAEIEKKWFAAYERGEVSHQGQRVE RCREFLGRPEMTEQEALAEYAKYLAAYEKHWQALGDALPTLQHVLSRGLKVGVLTNGARE MQEGKLKAGGLDLPGIELFPTVEMAKPKPHREAYLEACRRLEVEPSSTLMIGDSVTNDVE GARAAGLQALHFDRAGNGDIAALSELTAMGYFKRFKSKDLNL >gi|227860889|gb|ACLH01000031.1| GENE 10 10808 - 11338 923 176 aa, chain + ## HITS:1 COG:Cgl0034 KEGG:ns NR:ns ## COG: Cgl0034 COG0652 # Protein_GI_number: 19551284 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 1 175 14 188 190 241 76.0 4e-64 MAGMTQKTATATMHTNYGDIVIDLYGNHAPVTVENFIGLAKGEKDYTTQNAKGEQSGPFY DGAIFHRVIDQFMIQGGDPTGTGRGGPGYQFQDEFHPELQFDRPFLLAMANAGPGTNGSQ FFITVAPTPHLNNHHTIFGEVTDAASQEVVSKIAKVSTDRMDRPAEDVVIESIEIA >gi|227860889|gb|ACLH01000031.1| GENE 11 11410 - 12054 627 214 aa, chain + ## HITS:1 COG:Cgl0035 KEGG:ns NR:ns ## COG: Cgl0035 COG0705 # Protein_GI_number: 19551285 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Corynebacterium glutamicum # 6 208 18 223 229 131 39.0 1e-30 MKNYLKSAPATLVLMVLCIGAWCAAAIQGSSLSAPYYRSMLAQDWTLWGPEVSEHPTTVI TAGFMHLDAGHLLVNMVMLFFVGREVERALGSALYVVAYLISIVGSSAAVLWMDFGTPTV GASGALFALMGLLIGVYRSRGLDLRAPIVLVVANVIYSFVAENVSVWGHLGGLLTGLLLA PFLFRQRAWLRWLGIWLIGVIAAVAAALRAGLWG >gi|227860889|gb|ACLH01000031.1| GENE 12 12171 - 12431 95 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNATLSAATWWFSAVGSGFPHQIGLRHAKHPATGALLTPWVQSYPQGGDNSVENEFHSF SPHPVDKCFHASHSPHKNFEHNRLSC >gi|227860889|gb|ACLH01000031.1| GENE 13 12975 - 13220 207 81 aa, chain - ## HITS:1 COG:no KEGG:cauri_0024 NR:ns ## KEGG: cauri_0024 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 81 1 81 81 136 100.0 3e-31 MKTINGQPISEEQIDEWVTEAEKGYDVETLRTRGRKPRDNKAAKIVSIRLSPNEIAALDK YAAIHGWSRSQAIREALRKAT >gi|227860889|gb|ACLH01000031.1| GENE 14 13272 - 13925 640 217 aa, chain - ## HITS:1 COG:Cgl2707 KEGG:ns NR:ns ## COG: Cgl2707 COG2197 # Protein_GI_number: 19553957 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 3 208 5 201 206 118 37.0 7e-27 MSIRVFLVDDDELVRSTLRVYFQTTEDITVVGEATNGADCLAQLEEAKPDLVLADIHMPH MDGITLLKHLNSAPNPPTFLAVTAFDSDDTMLKILRAGGAGYILKNQRPRSIIEAVRAAV EGGTVVAPAAMHRLVDYIGEPATPRDPVAAAIESHELHDAEIAVLKLLLAGNSNSEIAAA THYSESAVKKHVSRLITIFGASTRLNLVTKILGGAGS >gi|227860889|gb|ACLH01000031.1| GENE 15 13935 - 14147 311 70 aa, chain - ## HITS:1 COG:no KEGG:cauri_0026 NR:ns ## KEGG: cauri_0026 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 70 1 70 70 71 100.0 1e-11 MRSSLAVAAAALVLFSAPIASAAETPVEATAETTATESTESTGFTFYKSFAGEFADHFRC STSPQRWWCG >gi|227860889|gb|ACLH01000031.1| GENE 16 14199 - 15275 807 358 aa, chain - ## HITS:1 COG:no KEGG:cauri_0027 NR:ns ## KEGG: cauri_0027 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 358 1 358 358 688 100.0 0 MSSSRFYSIAGVGCIILVMLTVTLDKNFLTPGALVLAGLGVSLTPLAIRRPLAAACGYGA LFAFAMWCPDWRSFLLLAWSPVIVGIVAFRTRWLWSVPPAVVYTYLVTTDPSINYLPDFD PLNLSIPFVLYAVSIVIGAALRKTRDQRLAAEHRAAEQREALMTALHDSVAATLTSVVMR SETLALTQSDPSAADSAEAIADDARRAMGEVRDLLRVMKNESVTQGVKSLEEDLDTMVSF LGSHGFQCEPQITVGKNGQLALPEKLSLVFSELAVNILKYARPESRVSIEATSTSKTIDV VITSVIAAQQSRQYMTTNLGLGEIARRVRRMHGSFGSGKEGDHWITRLTLPTAHLRKI >gi|227860889|gb|ACLH01000031.1| GENE 17 15291 - 15566 462 91 aa, chain - ## HITS:1 COG:no KEGG:cauri_0028 NR:ns ## KEGG: cauri_0028 # Name: not_defined # Def: putative septation inhibitor protein # Organism: C.aurimucosum # Pathway: not_defined # 1 91 1 91 91 139 100.0 5e-32 MPKSKITTEGSALPQSSSSATNRTPVKINSEGTPKWYIAIMLGLMLLGLLWLVVNYLAGE SIPFMQELGPWNYGIGFGLAIIGLLMTMGWR >gi|227860889|gb|ACLH01000031.1| GENE 18 15635 - 17575 2197 646 aa, chain - ## HITS:1 COG:Cgl0041_1 KEGG:ns NR:ns ## COG: Cgl0041_1 COG0515 # Protein_GI_number: 19551291 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 1 289 4 291 338 406 73.0 1e-113 MVSDRYHLRQSIGSGGMSEVYEAEDSVLGRTVAIKMLRPDMARDVNFRERFRREAQNSGK LNHPNIVAVFDTGEKDVDGLMVPYIVMEYVQGRTLRDIVREDGPMTVAEAARVLKPVAEA LQSSHEAGIIHRDIKPANIMLTNTGQVKVMDFGIARALDDSTSAMTQTSAVIGTAQYLSP EQARGKPADARSDVYALGCVMYETVTGRTPFEGETPFAVAYQHVQEDPTPPSELIDEELT ERERLGVDAVVLTAMAKHPADRYQSAWEMGDDLDRLAQGQLPEAARSHVNDEDHPTTMVA PVAAQHRAPVASTRPSEDEEAGSGLKWLAALLAASLVAIIGYFAWDFWDSSRQEAREREQ EQHEAAQRANMVTVPKVANRPRNEAVEELEKLGLLVTVNEEPSPDVPRGKVIRVNPAEGS ELQKNSSVTLTVSSGKEVTEVPDLTGMKLDEATTALEEAGLELNTDVEQVNDEAPAGEII SQNPAGGAQLSKGSKVRVTVSKGQKEVSVPDVSGMDRDRAVEMLSSMDFDVTVNSVDSEL PENQVLRVVEQGQKLPKGSQVTLEVSNSMLIQAPDITHSTQQEAESALRAKGWSGSLDVG ERIPTSNPIDSNKIGWASASRGDVIRKDETIQVRFWEFDPAALLPQ >gi|227860889|gb|ACLH01000031.1| GENE 19 17582 - 18994 1371 470 aa, chain - ## HITS:1 COG:Cgl0042 KEGG:ns NR:ns ## COG: Cgl0042 COG0515 # Protein_GI_number: 19551292 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 7 445 9 454 469 449 57.0 1e-126 MNSADNKEHLQALIGEDYQLQWIVGHGGMSTVWLADDVRNDREVALKVLRPEFSDNNEFL SRFRNEAKAAESIDSENVVATYDYRELEDNGRTFCYMALEYVRGESLADLLAREGALPET LALDVMEQASHGLSVIHHMGLVHRDIKPGNLMITQNGQVKITDFGIAKAAAAVPLTRTGM VVGTAQYVSPEQAQGYEVGPSSDVYSLGVVGYEMLAGKRPFSGDSSVSVALAHISQAPEP LSTSISAPTRELIGMALRKDPTTRFADGNEFTNAISAVRQGQRPPQPKSAALAPIAAEPS PSASTEMLANMAHPTTVRPAVSAPQTEERPAKQGGFGTGLLIAVAIAALVAIGFMAYRLW GNTTPTPQPTPTEVIVTETVEPETTEEEETEAPETVEITTVEEEPTQVTVTTTHSVIPSP PTTAQRTTQHDLPTLPTEETQPQVDDSPLPEPELDSQNNPTEESALQGGQ >gi|227860889|gb|ACLH01000031.1| GENE 20 18994 - 20424 1498 476 aa, chain - ## HITS:1 COG:Cgl0043 KEGG:ns NR:ns ## COG: Cgl0043 COG0768 # Protein_GI_number: 19551293 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Corynebacterium glutamicum # 1 474 1 473 474 457 56.0 1e-128 MNRSIRLVSLFALILTAVLLVNLTVVQAFSTDKYAHNPKNVRGYLEMRTTPRGQIFAGNT VLAQSTADAEGNYSRSYPADSPAFANITGYLSERFGASQLEASQNDILNGKDDSLLARNW LDILSGKPQKGANVEVTVDPALQQTAYDQLAGPGYNGAAVAIQPSTGKILAMASSPSFNV SDLLGDNAGEKWEQLQNQEGTPLVNHATQDTLPPGSIFKIITTAAGLNNGFEPNSTLTGA ASITLPDTVTELTNYGNQSCGGADSVTLQTAFALSCNTAFVQMSESIGADELRKYAEGFG VGEKYSLGVNTSAGALGELGDGAQVAQSAIGQRDVTMSALQAAIMAGTVANKGKRMEPYL VNRITDAQMNELRATTPRQAAEAINEETANTIKDLMFASERSTFGYDGNGFASKTGTAEH GEGLAPHAWYVAFDPDKDIAVGVVVKDGGHLGEGATGGQVSAPIGRAILRAYGGEQ >gi|227860889|gb|ACLH01000031.1| GENE 21 20421 - 21773 1882 450 aa, chain - ## HITS:1 COG:Cgl0044 KEGG:ns NR:ns ## COG: Cgl0044 COG0772 # Protein_GI_number: 19551294 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Corynebacterium glutamicum # 7 427 10 430 441 491 66.0 1e-138 MSKFFSRGTEFGLLVLATVVFAITLVSLELSQGNVLTLDVLYLIGGFIGVFAIAHLVLCF LAPYADQLMLPIVAVLNGTGLILLQRLDLANGGGLAVRQVMWTIVGLILFALVLVLLRDH RSLTRYSYILGALGLILLALPLVWPQPPGVDARIWLWLGPFSIQPGEFSKILLILFFAML LTQKRSLFTVAGYKFLGISLPRLRDLAPILVIWGIAIVIMGISNDFGPALLLFSTVLGML FMATNRVSWLLIGVILVGIGGFGIYQVSEKIQQRFSNFLDPLANYDSTGYQLSQALFGMS SGGITGTGLGQGHPDMVPVAHSDFILAGIGEEFGLVGLAAVLVLFAMLVSRGFRTALTCR DTYGKLVSSGLALTLAVQVFVVTGGISALLPMTGLTTPFMSAGGSSLMANYMLLAILLRI SNAARRPARELSSNAPTDTSMFPAVQEATR >gi|227860889|gb|ACLH01000031.1| GENE 22 21774 - 23099 1372 441 aa, chain - ## HITS:1 COG:Cgl0045 KEGG:ns NR:ns ## COG: Cgl0045 COG0631 # Protein_GI_number: 19551295 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Corynebacterium glutamicum # 3 440 2 450 451 426 53.0 1e-119 MTLSLTFTAVTDRGLVRENNEDSAHAGPHLLVLADGMGGHAAGEVASTTMVEHMASLERD PGDNDMLALLGAAAEDANAAIREHVDEHPETEGMGTTLTALLFNGSEFGVCHVGDSRGYR LREGKLTQITKDDTYVQSLVDEGKLDPEDVSSHPQKSLILKAYTGRPVEPTLFMLDAKPG DRLLLCSDGLSDPVTASTIEQALKQGTVEEAATTLRDLALRSGGPDNVTIVVAEVVEGEG DENAPMTVGAIQGVVPEPTHPDSSASRAAKLISPPKAQAAEEKPQEEPQRRPQRSRIGWK VIAGLAIIIVLVISGGLWMKSYLSNNYYVTANEDGVLTIQEGADYEVFGRPLHHTYQNAC LSKENALKLGHGACDGDFAPFTLKDLPESERAAVGNLPSGSYDEVQTQLSQLSDKALKPC PTSSKDGKDKDASKGNCREVK >gi|227860889|gb|ACLH01000031.1| GENE 23 23096 - 23548 452 150 aa, chain - ## HITS:1 COG:Cgl0046 KEGG:ns NR:ns ## COG: Cgl0046 COG1716 # Protein_GI_number: 19551296 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 1 149 1 153 154 168 58.0 3e-42 MDSIVLLSLRIGLLVLLWLFILVALNAMRRDANKAAGVYQASSPVKGSQKRREAPREIAI VDGPLRGSHMELGTLEDCTMGRAQDCDFVTGDDFSSGHHARLFRRGSEWFVEDLESRNGT FVGGVRIDQPERVGVGSDIKLGRTTVRLMA >gi|227860889|gb|ACLH01000031.1| GENE 24 23593 - 24417 1000 274 aa, chain - ## HITS:1 COG:Cgl0047_2 KEGG:ns NR:ns ## COG: Cgl0047_2 COG1716 # Protein_GI_number: 19551297 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 176 266 1 91 94 156 84.0 5e-38 MALLDKLAKLDSSLQRGLDNGMAFVFGGKVVPAEIEELLKQEAQDNLSRGDDGKLYSPNV MTVGVSSKDIENLSQDRGVPKDLADQLTRFIRNSGWSLAGPVIVRIAEESGLRTGQLRVS SFLDHEPTEETGFDAIFHHDHGQEDSMTQPHNADEAATTAFMAPTPNEPAPQGPAVTLML QDGSSRVYHVQEGSNILGRSNDADLRLPDTGVSRQHAEITWNGQDAVLVDLQSTNGTTVN DTPIENWLLADGDVITLGHSHIEVRITGLEGQGY >gi|227860889|gb|ACLH01000031.1| GENE 25 24828 - 24959 56 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METDWVSGTYGLALVVVNFVASKSNRLLRNLFASQMFPICQHF >gi|227860889|gb|ACLH01000031.1| GENE 26 25617 - 26927 1145 436 aa, chain + ## HITS:1 COG:no KEGG:cauri_0036 NR:ns ## KEGG: cauri_0036 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 436 1 436 436 791 100.0 0 MEQNKRVAGSALAALSALTLGVGMMATPPVAQAQSSSSSIVDEAGSSVNLGSEMGEVPER DAPVYRSGLPDVEPQGEPGTVLAEVPLDVNVGLSSASEQYRIAYTTVDQHGKPAVSTGAV YLPEGEKPEGGWPVLAWAHGTVGQSDECAPSINPLWPVEEEYLNTFLDEGYAIVATDYVG LDSPGFHSYLNGKVAAENVVDSVAAAHQMDATTDTEPVLADEWAVIGQSQGGGVALHVAH RATELSEDLEFDYRGGVATGAPAYVENLLLTFGPSFPPMPLPEIMGTYMLYVLASVYEAN PDIDFDSALTDEGRRMIAASEQSCLFEVGEAMEGVNLARAFKKPLREVPGADAAIREFLA TPVSGYDKPVFLGHGLFDSDVPTPIGVILNSSMWLRQFIGSPRNNRVVVRWYPADHVDTM NESTADSVPFLDGIMN >gi|227860889|gb|ACLH01000031.1| GENE 27 27128 - 27415 83 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRFATSRIGTPCFTAPTGVTSAIEPNAVCARAAGSDAAVPDSPAIRVAASTAAAQALAHA FPAVVCAALSGPVVALVRPISASCMSPAGAALNPR >gi|227860889|gb|ACLH01000031.1| GENE 28 27928 - 28474 334 182 aa, chain + ## HITS:1 COG:no KEGG:cauri_0037 NR:ns ## KEGG: cauri_0037 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 182 2 183 190 340 99.0 1e-92 MLHVAHRTTPLSQNLGLDYRGAIATGAPAYVEEIIIAAGPTFPPVPLPPALGTYGLYILA AVQEANPHIDFNPALSDEGRRMIAESKKSCFYEVRDAVDGTNLARAFTKPIRDVPGAEQA IRDFMATPVAGYDKPVFLGHGLQDMDVPTPIGLVLNSGMWVRQFVGNPRNNRVEVHWYPT DH Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:18:09 2011 Seq name: gi|227860888|gb|ACLH01000032.1| Corynebacterium aurimucosum ATCC 700975 contig00087, whole genome shotgun sequence Length of sequence - 6528 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 1 - 342 162 ## COG3328 Transposase and inactivated derivatives 2 1 Op 2 23/0.000 + CDS 389 - 709 175 ## COG2963 Transposase and inactivated derivatives 3 1 Op 3 . + CDS 932 - 1321 192 ## COG2801 Transposase and inactivated derivatives + Prom 1635 - 1694 2.3 4 2 Op 1 . + CDS 1751 - 5734 1146 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 5 2 Op 2 . + CDS 5794 - 6526 273 ## cauri_0051 hypothetical protein Predicted protein(s) >gi|227860888|gb|ACLH01000032.1| GENE 1 1 - 342 162 113 aa, chain + ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 9 113 1 110 416 65 38.0 2e-11 ADKAKIDAIERKLLANPEIAKLIDDLGTSTTDANDLVRGMLQASITRGLNAEMDAHLGYE SGDRSAKAAAGTDNHRNGTYSKTVDSNYGPVTVDVPRARAGTFLPTMVPKGSR >gi|227860888|gb|ACLH01000032.1| GENE 2 389 - 709 175 106 aa, chain + ## HITS:1 COG:MT0414 KEGG:ns NR:ns ## COG: MT0414 COG2963 # Protein_GI_number: 15839787 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 3 103 7 106 108 70 52.0 5e-13 MPRKYSVEFKEKAVHQIIEMVRLESCSLQRAYTEVGELLGVSHHTLRAWYRDSASVRDDS DASGGETMEEELKRLRRENRELKRANGILKTASAFFAAELDRPTTK >gi|227860888|gb|ACLH01000032.1| GENE 3 932 - 1321 192 129 aa, chain + ## HITS:1 COG:MT2881 KEGG:ns NR:ns ## COG: MT2881 COG2801 # Protein_GI_number: 15842353 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 1 129 66 196 294 107 46.0 5e-24 MNREGFHIGRDKTARLMKLAGVSGRRRGRTPVTTISPKTPDHRPDLVQRNFRAQAPGRLW VADITYVRTLSGFAYTAFVVDVFSRKIVGVATRSTMRTDALPMEALEHALTTAGRIHGNQ LIHHSDRGS >gi|227860888|gb|ACLH01000032.1| GENE 4 1751 - 5734 1146 1327 aa, chain + ## HITS:1 COG:Cgl2655_1 KEGG:ns NR:ns ## COG: Cgl2655_1 COG1020 # Protein_GI_number: 19553905 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Corynebacterium glutamicum # 30 640 13 635 636 537 48.0 1e-152 MPVKEGRILTYESSPRMSPVDHSEYAIFGTEDVPEPRTLVDIFEATVEAYPNEIALEASQ QLTYRELAQRVEAQVQRLNNIGVGPGARVGIRVPSGTLDLYIAILATLCAGAAYVPVDWD DPDSRADTVWEEADVTAVYGAELSLELQKESQEGVEQKAPTLGDDAWIIFTSGSTGKPKG VAITHRSAAALVDAESRMYLTDEPLGPGDRVMAGLSVAFDASCEEMWLAWRYGAALVAAP RDIVRSADALGKWITDHDITAISTVPTLASFWSTKSLEKVRLLIFGGEALPQELINRLAT PGRELWNTYGPTEATVICSGHRMVPMDSDTPVRIGRPTPGWQLAVIDPETEEPVRWGETG ELVVTGVGLGRYLDKEKDAKTYAPIPALEWQRAYRTGDLVVAETEGLIFAGRNDDQIKFG GRRMELGEIDRALAGAPGVLAAAAAKQKTPAGSDVIVGYIVPDGDISMADTRRHLATVLP GGIAPTLCFVDSLPTKTSGKVDRKALPWPLPDSDDFGSELPANLQWLAEKWSDQLGKIPM EEESNFFDLGGSSVAIAKLAVELRSDYPTLDIGALYENPTLSGMAEYVSGLKQSSGERRM PDKMPWWSGLFQTAVVCLIYVLNAARYIVGSLLVIWALKFFFNAAWVPGISFWPLAVGWF LLFSVPGKIAQITIVARLATAGIKPGVYSRGGWTHLRVWAAERFLTFLKLEPILGTPLAP LLFRLFGCTVGRGAQLATFPPVTGLAEIGDYATLEQEVDINGYWIDGDEVHIGRIAVGNG ARLGLRTFVNPEVRIGDYAEVLPGSSVSTDVPSGQLYGGSPLSHHGEAGLTWPGIHPERA AAEGTVAKVSTFGMRILYFLSLGWMSLLPVLAILPGLLVILPQVVKHERYEEVFPLLALW VPVFTLLTVLSWVTLVIFSVRLCSVFIKPGYFLQQSSTGWALWLTHSLLQKTLTSTYFLY AGWITPAFMRMLGARVGENTEISTVETIPHLTSIGNHCFLADHSLCTSARYRGGWVHVGT TVIGDGSFVGNSGIVGADHDLPTDSLIAVLSSTPERPARGSSWLGRSVRQIPRSQVSADK EQTFNPPHYLKFARAFVELFRFVPAIIAAYLDLFIVWVGTIVYMHWGMDAAGMRAVVLLS TPIVLAAGVIASLLPILVKWALVGKFRAGNHTLFSTFVWRGELVDNFTEMLAVPSLVRMS LGSPLFNWWARLMGTRIGKHVWCETWWLPEFDLITIEDRATVNRGTVLQTHLFHDRVMAL EKVHIKCGATLGANSFMLPGSALGERVTVHPGSLVLRQDEVPRDTIWQGNPISALDEPVE QLISKPN >gi|227860888|gb|ACLH01000032.1| GENE 5 5794 - 6526 273 244 aa, chain + ## HITS:1 COG:no KEGG:cauri_0051 NR:ns ## KEGG: cauri_0051 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 244 1 244 452 440 100.0 1e-122 MTGQNTPPETTQKRPAPGPTDVRPIWDGEKEKLPASISELIDPGPPTWSTDRAFGPRFSP NRIVGLDAARGVAIIGMIAVHILPPANEYTGEPTAIWKMCAGNSAALFAVLAGISVALMT GANNPHVGIKWRRSCVSLITRALLILGIGLVLDQFDIDVYNILPYYGLMFLLAVPLTRLR IWHLLSLSLLFAFIGPLVIFATNSRVVYLTTLNPGFYDVIETPLDVVITLLVGGTYPVVT WMAY Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:18:14 2011 Seq name: gi|227860887|gb|ACLH01000033.1| Corynebacterium aurimucosum ATCC 700975 contig00088, whole genome shotgun sequence Length of sequence - 1134 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . + CDS 838 - 1132 192 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|227860887|gb|ACLH01000033.1| GENE 1 15 - 629 211 204 aa, chain + ## HITS:1 COG:no KEGG:cauri_0051 NR:ns ## KEGG: cauri_0051 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 204 249 452 452 395 100.0 1e-109 MAVCRMNLKWLTTQVRLTVCGGLIAASSAIFTTFALDYGGGFAKLYGQTDGYGAHDILEI FKFGPDGHLPTDTAWWLAISGPHTETTPSIMLSAGVALFVIGVLLVISRTLSGLLFPLIT AGSMAMTLYVSHLLLFVPFLESIHEHAVIWFFAQIVSMMLLSSAWYFTVGKGPLESLMAM ICRRIGKMVVPPSPEPVNVPLQDK >gi|227860887|gb|ACLH01000033.1| GENE 2 838 - 1132 192 98 aa, chain + ## HITS:1 COG:Cgl2316 KEGG:ns NR:ns ## COG: Cgl2316 COG3464 # Protein_GI_number: 19553566 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 21 95 2 76 436 108 61.0 2e-24 MKMKVPTQPSKPTRDPCCEAKPTGNLVADTICRTAEIGLAITGAADAGPLTIIEATPVAV TGVCPDCGQPGKLRDHTTRRFVDLPVVGFPTRLHVTGA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:18:19 2011 Seq name: gi|227860886|gb|ACLH01000034.1| Corynebacterium aurimucosum ATCC 700975 contig00089, whole genome shotgun sequence Length of sequence - 635 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 141 - 377 125 ## 2 1 Op 2 . - CDS 471 - 626 75 ## gi|262183140|ref|ZP_06042561.1| hypothetical protein CaurA7_04045 Predicted protein(s) >gi|227860886|gb|ACLH01000034.1| GENE 1 141 - 377 125 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGPDGVGSVLGSGLIHHELVDENFVRIVVGYADIQGVRQLLQFGGHIWVTDPPEAVKITA DLASELAKRHSGTTIPES >gi|227860886|gb|ACLH01000034.1| GENE 2 471 - 626 75 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183140|ref|ZP_06042561.1| ## NR: gi|262183140|ref|ZP_06042561.1| hypothetical protein CaurA7_04045 [Corynebacterium aurimucosum ATCC 700975] # 1 51 4 54 54 66 100.0 5e-10 MRTEVLVQQFMGDVTFMQGASNTRVSGELNDQRQERKQVNFNHMESANMQE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:18:30 2011 Seq name: gi|227860885|gb|ACLH01000035.1| Corynebacterium aurimucosum ATCC 700975 contig00090, whole genome shotgun sequence Length of sequence - 3074 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 390 188 ## gi|262183141|ref|ZP_06042562.1| hypothetical protein CaurA7_04050 - Prom 530 - 589 2.6 2 2 Tu 1 . + CDS 749 - 961 91 ## cauri_0057 hypothetical protein + Prom 1289 - 1348 1.7 3 3 Tu 1 . + CDS 1532 - 1828 93 ## Shewana3_1247 hypothetical protein + Prom 2628 - 2687 2.7 4 4 Tu 1 . + CDS 2747 - 3007 158 ## Predicted protein(s) >gi|227860885|gb|ACLH01000035.1| GENE 1 3 - 390 188 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183141|ref|ZP_06042562.1| ## NR: gi|262183141|ref|ZP_06042562.1| hypothetical protein CaurA7_04050 [Corynebacterium aurimucosum ATCC 700975] # 1 129 1 129 130 218 100.0 8e-56 MFYVGMGGYQKQTILSPSDLPQSLRFDSDEMTAVGASISELETIVNAEAVPSIELPKKWV AMYAQLFEEGQASGFSMMVLERAMVQYSKLQFSQVLSRTRTEALKLSLELEKISPEMLSP EETSNDDLK >gi|227860885|gb|ACLH01000035.1| GENE 2 749 - 961 91 70 aa, chain + ## HITS:1 COG:no KEGG:cauri_0057 NR:ns ## KEGG: cauri_0057 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 70 1 70 70 135 100.0 8e-31 MKFFNSPSFTIRVQGQDYLSKELRLIILVDIIAISLNVDCTAQIEIDLTTHKRTPSFWTT DFLDGNPVLY >gi|227860885|gb|ACLH01000035.1| GENE 3 1532 - 1828 93 98 aa, chain + ## HITS:1 COG:no KEGG:Shewana3_1247 NR:ns ## KEGG: Shewana3_1247 # Name: not_defined # Def: hypothetical protein # Organism: Shewanella_ANA3 # Pathway: not_defined # 1 77 102 178 272 75 44.0 9e-13 MSFDGLFVSEEGKARWITKTNTLSEAKLRSEQFRTLLLGRDAHEQVLRHCRPELLKEDYY EAAFESIKGLAERLRLLLEWTWTQGSWPNQSSAEETRG >gi|227860885|gb|ACLH01000035.1| GENE 4 2747 - 3007 158 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPPYRVSAPGKFFGRWLASAFATYAYVYIRAYTYNDFFYLDTYLAITFSLKRFLLVKSVG AHSDYLFGNTAKCLLALKSTSYGLRR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:18:59 2011 Seq name: gi|227860884|gb|ACLH01000036.1| Corynebacterium aurimucosum ATCC 700975 contig00091, whole genome shotgun sequence Length of sequence - 33435 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 19, operones - 12 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 142 - 201 2.1 1 1 Op 1 . + CDS 259 - 552 216 ## gi|262183143|ref|ZP_06042564.1| hypothetical protein CaurA7_04060 2 1 Op 2 . + CDS 562 - 1038 157 ## cauri_0061 hypothetical protein 3 2 Op 1 . + CDS 1320 - 1736 212 ## cauri_0062 hypothetical protein 4 2 Op 2 . + CDS 1785 - 2198 326 ## cauri_0063 hypothetical protein - Term 2166 - 2202 1.1 5 3 Tu 1 . - CDS 2210 - 2743 195 ## cauri_0064 putative secreted protein - Prom 2763 - 2822 2.1 6 4 Op 1 . + CDS 2848 - 3675 632 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 7 4 Op 2 . + CDS 3675 - 3971 66 ## COG4357 Uncharacterized conserved protein + Term 4004 - 4028 -1.0 - Term 3866 - 3904 3.0 8 5 Op 1 . - CDS 3976 - 4479 659 ## cauri_0067 putative secreted protein 9 5 Op 2 . - CDS 4512 - 5828 1426 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 10 6 Op 1 . + CDS 5906 - 6886 1323 ## COG0502 Biotin synthase and related enzymes 11 6 Op 2 . + CDS 6886 - 7140 257 ## cauri_0070 hypothetical protein 12 6 Op 3 . + CDS 7152 - 8075 866 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 13 7 Tu 1 . - CDS 8072 - 8821 580 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold + Prom 8816 - 8875 2.1 14 8 Op 1 . + CDS 8989 - 10392 1455 ## COG0775 Nucleoside phosphorylase 15 8 Op 2 . + CDS 10446 - 10961 764 ## COG2236 Predicted phosphoribosyltransferases 16 8 Op 3 . + CDS 10961 - 12409 1411 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Prom 12440 - 12499 3.1 17 9 Op 1 . + CDS 12522 - 13004 751 ## COG1528 Ferritin-like protein 18 9 Op 2 . + CDS 13069 - 13455 270 ## cauri_0077 hypothetical protein 19 9 Op 3 . + CDS 13397 - 13966 402 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 14155 - 14191 -0.0 20 10 Tu 1 . - CDS 13963 - 15069 1025 ## COG1940 Transcriptional regulator/sugar kinase + Prom 15025 - 15084 2.7 21 11 Op 1 . + CDS 15138 - 15707 537 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 22 11 Op 2 . + CDS 15778 - 17439 2122 ## COG4805 Uncharacterized protein conserved in bacteria - Term 17418 - 17447 -0.7 23 12 Tu 1 . - CDS 17523 - 18593 1119 ## COG3180 Putative ammonia monooxygenase 24 13 Tu 1 . + CDS 18586 - 19362 789 ## COG0730 Predicted permeases 25 14 Op 1 . - CDS 19359 - 21548 1656 ## COG1643 HrpA-like helicases 26 14 Op 2 . - CDS 21541 - 22164 550 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 22239 - 22298 2.4 27 15 Op 1 . + CDS 22249 - 22800 727 ## COG0431 Predicted flavoprotein 28 15 Op 2 . + CDS 22806 - 23498 789 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity + Term 23561 - 23597 -0.9 - Term 23489 - 23532 6.2 29 16 Op 1 . - CDS 23546 - 25123 1660 ## COG1012 NAD-dependent aldehyde dehydrogenases 30 16 Op 2 . - CDS 25169 - 27418 2487 ## COG1292 Choline-glycine betaine transporter + Prom 27467 - 27526 2.4 31 17 Tu 1 . + CDS 27750 - 29525 1836 ## COG2303 Choline dehydrogenase and related flavoproteins + Term 29551 - 29590 9.1 + Prom 29583 - 29642 3.6 32 18 Op 1 1/0.182 + CDS 29705 - 30325 423 ## COG1280 Putative threonine efflux protein 33 18 Op 2 1/0.182 + CDS 30315 - 30623 226 ## COG2501 Uncharacterized conserved protein 34 18 Op 3 . + CDS 30623 - 31327 762 ## COG3324 Predicted enzyme related to lactoylglutathione lyase 35 19 Tu 1 . - CDS 31643 - 32713 558 ## cauri_0093 hypothetical protein Predicted protein(s) >gi|227860884|gb|ACLH01000036.1| GENE 1 259 - 552 216 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183143|ref|ZP_06042564.1| ## NR: gi|262183143|ref|ZP_06042564.1| hypothetical protein CaurA7_04060 [Corynebacterium aurimucosum ATCC 700975] # 1 97 1 97 97 150 100.0 2e-35 MNLNPVARFKSAQTQPTISVEDVERVRRQRRLAKTEEEYSDVRSQMRDLVAELRSTPVRN PKTTKIAGIIILVIGIIVGALLFYAAYLLWPGFVEDW >gi|227860884|gb|ACLH01000036.1| GENE 2 562 - 1038 157 158 aa, chain + ## HITS:1 COG:no KEGG:cauri_0061 NR:ns ## KEGG: cauri_0061 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 158 1 158 158 283 100.0 1e-75 MKDNSSETNDGTLTDRQTLLFLVGGIVCCFAYLLYGVALIVLASLVTLGSIAVGVFLILR SSESGDAKLRAVSGAIEQLSNDASFDISEELIAWDKLKYTKGIGTRIAGQDGVIEDMYRR LANAREELAQADTPVHRIEAVLAVDSVLAIAKELRTSE >gi|227860884|gb|ACLH01000036.1| GENE 3 1320 - 1736 212 138 aa, chain + ## HITS:1 COG:no KEGG:cauri_0062 NR:ns ## KEGG: cauri_0062 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 6 138 1 133 133 243 99.0 1e-63 MGNGIVRGSNGLEALTVEELLPFVYNWRDMDKEQRIYMWEGYEESIRSGEKQQTIRVDDP FHEGSAQIVFEKESGEVVTIPAEVTSVVSTQRRSLTEEQARRDGFGSLAELHEALDTHYP GLAGDDEVDVVEFTLRKA >gi|227860884|gb|ACLH01000036.1| GENE 4 1785 - 2198 326 137 aa, chain + ## HITS:1 COG:no KEGG:cauri_0063 NR:ns ## KEGG: cauri_0063 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 137 1 137 137 228 100.0 6e-59 MFGPASAQPPRLIDFPVLRLPFVEFVFVGLLVAVFFVDTQGTDAESGFLAVFVVLPALVF LGIAYLISLPMQRKEITDFRLDAVFVVIGVIGLFGWIGQMLIALPFLCCLPVGLSALIRR GIAFALWKKGKGPQLPE >gi|227860884|gb|ACLH01000036.1| GENE 5 2210 - 2743 195 177 aa, chain - ## HITS:1 COG:no KEGG:cauri_0064 NR:ns ## KEGG: cauri_0064 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 177 1 177 177 286 100.0 4e-76 MKRILPLAAALFVLSGCTSLDVESTLESETPPSTSTSVTETAEETPHPTLPAAEESAEDI GVDQPQEEVIGFTEAPGAAQPSPMEKSIDSCGDVSLHETGTTFFSDGTSGWTQQCADEMT AVNPPVQEAAAIYEAPAVQQNYVHPGAYCSGGSGVSKKGVPMTCAPASDGRMRWQSA >gi|227860884|gb|ACLH01000036.1| GENE 6 2848 - 3675 632 275 aa, chain + ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 39 265 78 304 324 99 28.0 5e-21 MKNGFLQRAFLAILLGTAAPVPAHAQTMETSAAQDLGINDPDCKPTGSVTEPVVLLHGTS ANAADWNDLIPKLTEQGMCVWAFDYGAEDVTYQNAYDYMKGIADLDASGREIAGHIEHIR EVTGSDKVNLVGFSQGGLHTKTFTQLYGSAEEVNRVVTIGANFHGTTWGDRAAPVNTAAK IAPDVVDFLGTSAGIQQLQGWDFMEDLNQLPDTAPSVTYTSIYSPADNTVTPNQTSELSA VPGADVANVESAPVDHGQLPHDPRVHEQIIWGLTR >gi|227860884|gb|ACLH01000036.1| GENE 7 3675 - 3971 66 98 aa, chain + ## HITS:1 COG:SPAC29B12.12 KEGG:ns NR:ns ## COG: SPAC29B12.12 COG4357 # Protein_GI_number: 19115901 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Schizosaccharomyces pombe # 8 97 17 110 113 75 45.0 2e-14 MTQIQGAIDAEGRCRHWHTLVDVIANKCHTCGGWFACSLCHAELTDHDFGPMPKDELCVM CGACGRTMTYAEYSAYKCPACGHAFNPGCALHAGTYFS >gi|227860884|gb|ACLH01000036.1| GENE 8 3976 - 4479 659 167 aa, chain - ## HITS:1 COG:no KEGG:cauri_0067 NR:ns ## KEGG: cauri_0067 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 167 1 167 167 249 100.0 2e-65 MWRMRNKLVLCSVAAAIGLSAPTASADMVDDYLAKVPAGQISCEQATKYYTNPSDYNSKK SQALAAANFHPRGGEIRDAVARADEAIARCGLNGGGGNTAPAQNAAPANNTAPANNTAPA NSGNNAPANNAFPTFPVTIGNFTFNVPDILAYLKTLVEGTPLAPLLP >gi|227860884|gb|ACLH01000036.1| GENE 9 4512 - 5828 1426 438 aa, chain - ## HITS:1 COG:Cgl2768 KEGG:ns NR:ns ## COG: Cgl2768 COG0624 # Protein_GI_number: 19554018 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Corynebacterium glutamicum # 4 437 2 441 441 577 66.0 1e-164 MDSTLYDDTLTLLQELIRNACVNDLTPDSGNEVRNADTLERFFAGTPVEIQRYESHPGRV TIVVTVPGDPDKEPLTLMGHTDVVPVDEPKWTKPPFEALIEDGKLYGRGAVDMLFITATM AAVTRDVAKHGNPGGTLAFVGMADEEARGGLGSIWMDKHHPEAYSVRNCLSETGGSHLPG ALGFNVGEKGAGQRRLHVHGDAGHGSTPFGKDFAIVKIGEVARRIAAAEPPVATDEVWQG FVKTFRFDPATEAALLDGSATAADYEKFGRLSAYAHAFSHTTIAQTVLRAGGAINVLPSH AYLEMDIRPFPGQTQEELDEFLREALGDMAEEVEIEHLITEDATQSSTDTKLWRCIEETA HEFFPDKEVLPVLATGGSDLRVARRRGGNAYGFALHAEDRDMASANSQLHSHDEHLYLED LDLTVKAYFSLVNRFLAR >gi|227860884|gb|ACLH01000036.1| GENE 10 5906 - 6886 1323 326 aa, chain + ## HITS:1 COG:Cgl0072 KEGG:ns NR:ns ## COG: Cgl0072 COG0502 # Protein_GI_number: 19551322 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Corynebacterium glutamicum # 2 326 6 330 334 459 67.0 1e-129 MSIVDIAREKALEQGIGLNEEELLQVLQIPDEQLEEIADIAHQTRLKWCGPDVSVEGIIS IKTGGCPEDCHFCSQSGLFESPVRAARLNIPELVEAAKKTAKTGATEFCIVAAVKAPDEN LLSQVAEAIPAILDEVDIEISLSLGTLTREQAQRLKDMGAQRYNHNLETSKSFFPNVVTT HTWEERKETLENVRAVGMEICSGGIIGMGESLEDRAEFAYQLAQIEPCEVPMNFLDPRPG TPFADYPLVPLGEALRAVAAFRLAMPSVTLRFAGGRELSLGDDGTEKGLLGGINAIIAGN YLTTLGKQIEKDVDMLGRIDLPIKAL >gi|227860884|gb|ACLH01000036.1| GENE 11 6886 - 7140 257 84 aa, chain + ## HITS:1 COG:no KEGG:cauri_0070 NR:ns ## KEGG: cauri_0070 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 84 1 84 84 167 100.0 1e-40 MKNSTELAAAVLAGEEPLFHPNTGKPLSEDFTLHPAAAAGLDVPRYCQLCGRRMVVQVRP DGWNAHCSRHGELDSDHLYEEALP >gi|227860884|gb|ACLH01000036.1| GENE 12 7152 - 8075 866 307 aa, chain + ## HITS:1 COG:Cgl0079 KEGG:ns NR:ns ## COG: Cgl0079 COG0846 # Protein_GI_number: 19551329 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Corynebacterium glutamicum # 113 307 1 195 195 256 63.0 4e-68 MDPAVAHAHQSALRSISRVVSEIAEPTPQQQALDAVTDQLRHGNVMVLTGAGVSTESGVP DYRGPNGSLSRHRPMTYQEFLHDPQASHRYWARAFVGWRVMQAAHPNRTHYALVELERAG LLKGVVTQNVDGLHEEAGQRNLIALHGDMQHVVCLSCGYEEARADYDARAATANPTYLQR WAVNKDDVNPDGDVALSEEAVEEFIMPGCVRCGSQRLKPDVVYFGEPVPTHKKDAAYAMV NASDSLLVAGSSLAVMSGFRFVLEAKKQGKRVATINGGPGRADDRVDTLWRTQVGPAFDA ILDELEL >gi|227860884|gb|ACLH01000036.1| GENE 13 8072 - 8821 580 249 aa, chain - ## HITS:1 COG:Cgl0080 KEGG:ns NR:ns ## COG: Cgl0080 COG1075 # Protein_GI_number: 19551330 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Corynebacterium glutamicum # 4 249 64 315 324 268 49.0 5e-72 MIPLPLGARRRARGVYEDDWSARPTAERPWPVVLIHGTCDSKGIWQVLADMLRAAGWVTF APDYGTRATGPLQESARQLDAYINAVRTVTGAEKVILVGHSQGGLLARYWMRMHDGAEFV RHVVCISAPNHGTTQGGIASPLFRSERQEEVARSLIDAWFGPAGMQQVTGSKIVEDTNRG SEVEPGVSYTCIATRSDAIVVPPNTCFLNGQQVRNIYIQDIERLAIIRHEDMPMDKRVCQ VILEELEQL >gi|227860884|gb|ACLH01000036.1| GENE 14 8989 - 10392 1455 467 aa, chain + ## HITS:1 COG:Cgl0095 KEGG:ns NR:ns ## COG: Cgl0095 COG0775 # Protein_GI_number: 19551345 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Corynebacterium glutamicum # 9 467 5 469 469 672 71.0 0 MTDLQHVHSVNEAVARLCELYDKSCALAREALASGDHDAYRHVVYPKITVHIRQWTPIDR SEPFGYVDQEGRYSAVISKPWLIRDYLIEQLTRLSNNYPCDLYVGQSDERIPPEYIRGTT HIPQDRGNIPRPTLDAVHDGIVDGAWKAFHGKDKPLFHFGPQRFDIACARIEHYTGIEVD TVQKYILFTNYAMHTTEFVKFGLRELAREDSRYTALVLPTGETIHPNDAVLLDVDELTLT SRYQMPRFDLITAGGDGITMINIGVGPSNAKTITDCLAVLRPEAWIMIGHCAGLDGRMRI GDLILGNAYQREDHILDGTVTTSNPIPAIPEIQRMLEAAVEEVYGKDNSLMRTGTVLSTD DRNWEWRTSRDLWEWLRHSTAVAVDMESCTLAANGYRYRIPYGTLLSVSDLPLHAVPKLP AQAQAFYSNSKEAHVMCAVRAVEALAENPERLRTRKLRRTVAEVPFR >gi|227860884|gb|ACLH01000036.1| GENE 15 10446 - 10961 764 171 aa, chain + ## HITS:1 COG:Cgl1433 KEGG:ns NR:ns ## COG: Cgl1433 COG2236 # Protein_GI_number: 19552683 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Corynebacterium glutamicum # 10 161 4 154 158 149 53.0 2e-36 MSTPEWWNPERENLTWEVFGEASRFLSQEIVDSGWFPDLIVGVARGGLIPAGAIGYAIGV KEMGAINVEFYTDIGETLPEPILLNPQLDTDSLKDKKVLVVDDVADSGKTLDLVVNLLEQ TASEVKSAVIYTKPTTIFEPDFSWKKTDQWINFAWSVLPVITRDGSFQEGH >gi|227860884|gb|ACLH01000036.1| GENE 16 10961 - 12409 1411 482 aa, chain + ## HITS:1 COG:Cgl1438 KEGG:ns NR:ns ## COG: Cgl1438 COG0659 # Protein_GI_number: 19552688 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Corynebacterium glutamicum # 29 479 2 458 462 501 64.0 1e-141 MPEASAGSFRAAFSSPARFRKEVFGGLAVALALIPEVLSFSILAGLDPKVGLFASVIMAM SIAVTGGRPAMVSAAAGSVAVVIAPLAHEHGLQYVLLTIWMAGILQVVMAVLGVAKLMRF IPRSVMLGFVNALGILMFTAQLSHLWNVPWLVYVLVALGLLIMVVWPRITTVIPAPLVAI VVVTVLTVIFGWQVPDVADQGELPTSLPGFVIPDVPFTRETFLLCLPYALGVALVGLMES LLTAKLVDDLTDTHSDKTRESVGQGIGNMLAAAIGGMGVCAMIGQTMINVKESQARTRLS TFLAGVFLLVLILVLGDTVGKIPMAALVAVMFMVSFHTVDWRSVRTIHRMPLSETLVMLV TVVGTLATNNLAVGVILGVLTASVAFARRVAHLVSVELEGNVYTVRGQLFFASSNDLVYA FDYTLPVDKVIVDFSEADIWDASTVAVLQAVESKYASRGIAVEFRGLDGVSLARYQRISD LG >gi|227860884|gb|ACLH01000036.1| GENE 17 12522 - 13004 751 160 aa, chain + ## HITS:1 COG:Cgl2474 KEGG:ns NR:ns ## COG: Cgl2474 COG1528 # Protein_GI_number: 19553724 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Corynebacterium glutamicum # 1 160 3 162 162 160 53.0 8e-40 MDEKLQTLLNAQVNNEHGAALIYTQLAYEMDNLSFPGMRDWFFKQAEEEREHAQKFAEHL LDRGYRVELEDIQVGSVKAATPLDAFEASLAHEQKVSEQIREIARTADAAGDLDSRGLIN WFLDEQVEEESSVSEIIDQLKLVGNDGSGLLRIDGSLAQR >gi|227860884|gb|ACLH01000036.1| GENE 18 13069 - 13455 270 128 aa, chain + ## HITS:1 COG:no KEGG:cauri_0077 NR:ns ## KEGG: cauri_0077 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 128 1 128 128 154 100.0 9e-37 MTTTRLMLICGALAGLVIALVGGTWLAATNMALGTFFFALAVMLGPFAGLALLLCAAAAS TALSRSLFSVGGLFLVGAISTLWAHGTLSLPLFVAGTLTGASAVWLHWAHGKFALRPLWR AHAARREL >gi|227860884|gb|ACLH01000036.1| GENE 19 13397 - 13966 402 189 aa, chain + ## HITS:1 COG:Cgl0120 KEGG:ns NR:ns ## COG: Cgl0120 COG1011 # Protein_GI_number: 19551370 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Corynebacterium glutamicum # 3 187 6 195 201 144 39.0 1e-34 MASLLFDLYGVLMRPAGNSELEDYLRPDNVEHFWSLYEEFRPAYDAGHLSDAQYWGRIRA LAGLAPFDVSHAIELDTEHLLVADEEMVRAVLGFIGQGHSVGILANVPAALGTRIRQTQP WLEECAAVTLSCDIGVAKPDPEAYLVAVDALGAQAKDTHFFDDRPDFVAGAQHLGLKAHL FTGITSIPF >gi|227860884|gb|ACLH01000036.1| GENE 20 13963 - 15069 1025 368 aa, chain - ## HITS:1 COG:Cgl0122 KEGG:ns NR:ns ## COG: Cgl0122 COG1940 # Protein_GI_number: 19551372 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Corynebacterium glutamicum # 18 361 18 386 388 265 49.0 1e-70 MRSGEFILDAMIKSGPVFTRPRTPAAKCLHIIRLNPVVTRSELVEATGLSQPTITRATAA LLGAGLIRQRTDLTQSRGRGRPTVPLEVADNDWMLAGIAVGTAFTHIAFFDTQGRTLREE DVATPVSRLSASDVIEHIIAGVNRLMAGLDRRLVSVGVTTSGSVNEAGRITAHNLGWDEM DIASRLEYQFGVPVVVSSVIPAILGSETQSTEMGAEKPVMVLYADDSVGAALTVGDEIVQ LDIDDPDSLATQAVLDVTGEESFPDVVANADDETRALLDDRARSLGATAAELLAEHKPDT LVVAGGAFSDDPAAPKLFASAVRQATDHPVELRMVPSHTEIVRACTRAVALDPLLRVPLD LGREAKAA >gi|227860884|gb|ACLH01000036.1| GENE 21 15138 - 15707 537 189 aa, chain + ## HITS:1 COG:Cgl2328 KEGG:ns NR:ns ## COG: Cgl2328 COG1611 # Protein_GI_number: 19553578 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Corynebacterium glutamicum # 1 186 10 195 195 187 48.0 8e-48 MDSVAVYCGSAAGNSEAYSQAAHHLGEELARRNLTLVYGGGDVGLMGIVADSCLAAGGTV IGVIPRQLVDYELSHQRVTQLEVVDTMAQRKTRMEELADAFVCLPGGVGTLEELTEVLTL QQLGNIDGPVGLVDVNGYWQPFTKMYSAMVQEGFVQKRFLDALVVNADPAEVLNEFASWV SPGSKWSNN >gi|227860884|gb|ACLH01000036.1| GENE 22 15778 - 17439 2122 553 aa, chain + ## HITS:1 COG:Cgl0137 KEGG:ns NR:ns ## COG: Cgl0137 COG4805 # Protein_GI_number: 19551387 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 553 1 553 553 669 62.0 0 MSFDQNAERQPSLLDASCDNFVHDLAQLTPTDATAWGIPGFDGELEDFSPEYYSSVADRT REMMADLDALDDTTDESDDDDDFDEVDYVTAAVLRDRLCLDLDLHHAGEDIRCLNNIASP VQTIRDTLMLMPKDTPEQLDALRSRLSKVSASLNGYKESLTEAASRGMVAPQRQISDVFV QCERLADAGSMLEDLGVEGPEVDAAKEAFGEFADWLSNELQPQAPSQDAVGRERYERFSK LFVGDTVDLDEAYEWGLDQVRSIKAEQEKIAHELYGSDVTVRAAMRKLNEEERYQLHGTD ALVEWMQSTADRVIKDLDGTAFDIPEAAKEIECCIDPAGTGGIFYTSPSDDFSRPGRMWW SVPAGQELFHTWQELTTVHHEGAPGHHLQIGAALTQPDLNLWRRAVTWNSGHGEGWALYA EALMAELGYMDDPGFRMGLLDAQRFRAARVVVDIGLHLGKPLPDCTASGVWDKSHVKTFM RENTAMDDANLSFEVTRYLGWPGQAPSYALGQRLWQQTRDAAVEQGMDVRDFHSQALALG SVPMSILRETILD >gi|227860884|gb|ACLH01000036.1| GENE 23 17523 - 18593 1119 356 aa, chain - ## HITS:1 COG:Cgl0138 KEGG:ns NR:ns ## COG: Cgl0138 COG3180 # Protein_GI_number: 19551388 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Corynebacterium glutamicum # 14 348 24 368 379 287 54.0 3e-77 MTIIKLDCMSVRARWAIVVPGSVALGAVFSYLHVPAAWILGAIVVSGAMALTTGKELSVN DRFYAVARGFIGMMAGIPLTLVPASTLIGFVPAAVTMSLITVLIGVAGGVLLHRSQPKDI SWETGILSMLPGGASLMPALASELGADYRYVALTQYLRLLTVSVSLPLVVSLLDAPAGEG VDMSVDGEVTWWVVLLTLAIAVVGEKLGKLVRLPAAAVLGPLILTVLVAQVIPAGHTLEP LYVFKIMAFMSIGWVCGGGLSVPALRAFAKQLPATILFIVVVIGVCALTALPLTAWLDIT YFEAYLATSPGALETVLALSAEGGAGPAVVAVQIIRLIIVLVIAGYLPQILGLFRR >gi|227860884|gb|ACLH01000036.1| GENE 24 18586 - 19362 789 258 aa, chain + ## HITS:1 COG:Cgl0140 KEGG:ns NR:ns ## COG: Cgl0140 COG0730 # Protein_GI_number: 19551390 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 1 256 1 256 260 271 70.0 1e-72 MVMGFGLSGWAILTIGAAVAGWIDAVIGGGGLVLIPLIMAVAPQLAPAAALATNKVAAVS GTASAAITLVKKVRPPKGELIRMGLIALLCSGLGATAAALMDKDVMRPVIIVLMVAVGLF VAFRPDFGSGEGNGIRGGWRTWAGLAAVAAIAFYDGIFGPGTGMFLIMAFTAIFSQNFLT SAAMSKVVNTCTNVGALVVFIVGGHVVWGLALVLAAANIIGAQLGARTVLGGGAKLIRYA LLTLVVVMSVYLAWQQWG >gi|227860884|gb|ACLH01000036.1| GENE 25 19359 - 21548 1656 729 aa, chain - ## HITS:1 COG:Cgl0142 KEGG:ns NR:ns ## COG: Cgl0142 COG1643 # Protein_GI_number: 19551392 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Corynebacterium glutamicum # 74 729 19 717 717 669 53.0 0 MFDLKAIGKGLPVLETIDSLPSDGHVVVQAPPGTGKTTLIPPALANQVEGKVLVTAPRRV AVRAAANRLQELSGQRIGYAVRGDSRKGQDVEFVTPGVLLRRLLRDPELEGISAVAIDEV HERQLDTDLVLGMCLELAQLRDDFRVIAMSATVDATRFSQLMGNAPIHSTEAVTYPLDIS YEPIPGRAAGDRDFWKGVAKVAARQHESTLVFVPGVREVNLVCDALSGHNVFPLHGRQTT QEQDAALYTREQRIVVATSIAESSLTVPGVRTVIDAGLSRVPKRDAQRGMSGLVTVSTSK SSADQRAGRAGREGPGTVIRCYSQEDYQHFSPHVIPEILSADLTQAALFMDCWGAGPDFP LLDQPPKAALADAHRTLDLLNAGEELALLPTHPRWGAALLKYGAGAARTIARLDDSDPKR LARLVPNKGPVDPGVVVASAFPEFVAKRVGDKEYLLASGTRARFFEDGHGWLAVAEVSLA QSGNAIIREAVPIAEKDALDIIGVTEETRAFLDGPTVRGVRVRAAGAIVLSETPVKVSGD EAVEALRNSGQGLNLFHFSDKAQNLRERMRHLHAAYGEPWPDVDGDDLSWLEPELHELAA GKRPDMYPALQRLLPWPEASRLDELAPERLPVPSGRAARIDWSGERPVVSIKLQECFGLA ESPEYCGHRVQFHLLSPAGRPLAVTDDLASFWSGPYAGVRADMRGRYPKHPWPEDPWNAV ATAKTKNRL >gi|227860884|gb|ACLH01000036.1| GENE 26 21541 - 22164 550 207 aa, chain - ## HITS:1 COG:Cgl0143 KEGG:ns NR:ns ## COG: Cgl0143 COG0110 # Protein_GI_number: 19551393 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Corynebacterium glutamicum # 8 205 7 201 228 176 49.0 4e-44 MSQENLADHGSFERMTSGQWFMPGVNEDVSAEHRRGFLLVKELNELHNTNPERAKEILRA LLSPESEVPGLHAPLNLEYGCNVTIGKGVFINFGATILAQAPVTLGDHVMIGPNCSLITV GHPVNDHEMRADGWEIAKPISVGRNTWFGANVTVLPGVTIGEDCVVGANTLITTDIPDKS LVLGQPGRVVRTLEDNENRWERQDLDV >gi|227860884|gb|ACLH01000036.1| GENE 27 22249 - 22800 727 183 aa, chain + ## HITS:1 COG:Cgl2851 KEGG:ns NR:ns ## COG: Cgl2851 COG0431 # Protein_GI_number: 19554101 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Corynebacterium glutamicum # 8 169 2 166 181 187 53.0 9e-48 MKGIFMAKIGIILGSTRDDRAGLAIAQWVTDLAQGRDVDYELIDLKAFDVPILTSSVVPM AANKNYEDPNVQAWSEAIDSCDAFIFVTPEYNHSVPGAFKNAVDSLGAEWVAKPIAYVGY SFSGGIRAVEAWRLIMANFSMKQLRTQLDISLNTDMKDGTFTPADFKAGIVENICAELEE ALF >gi|227860884|gb|ACLH01000036.1| GENE 28 22806 - 23498 789 230 aa, chain + ## HITS:1 COG:Cgl2154 KEGG:ns NR:ns ## COG: Cgl2154 COG4221 # Protein_GI_number: 19553404 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Corynebacterium glutamicum # 2 229 21 252 253 262 66.0 5e-70 MEKVAVVTGASSGIGEASARALAADGWHVVVGARRVERLEALANDIGGEAYALDVTSDES VAEFVSHLDRVDLLVNNAGGAKGLEPLVDTTIEDWQWMYEVNVLGTVRMIQTLMPKLRGG LIINMGSVAGWNVYEGGSGYNAAKHGVRVISRALRIEEHGVRVTELDPGRVATEEFSLNR FRGDAKRAAQVYDGELNLTAEDIAEAVRWVASLPEHVNIDTMTIKPRTQS >gi|227860884|gb|ACLH01000036.1| GENE 29 23546 - 25123 1660 525 aa, chain - ## HITS:1 COG:BS_gbsA KEGG:ns NR:ns ## COG: BS_gbsA COG1012 # Protein_GI_number: 16080158 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Bacillus subtilis # 26 522 3 488 490 508 52.0 1e-144 MSTQNTLFDPTQTELLKGVHADGAPKSLFINGQWEAAQNGDTRTIICPADGTTVGLVSEA SDEDTERAIKVARETFDKGEWATTPAAERGKLVIRVADFIREHKELFAQAESADTGKRYE ESLGDMDDIANAFEFFGTLAQHQAGRVVDPGDSNIRSRIDAEPVGVCGLITPWNYPLLQV SWKVAPALAAGNTFVLKQAELTPHTAMLLMTALKECGLPDGVGNLITGAGANCGNPLSKH PDVDMVSFTGGLVTGKIIAKNAAETVKRTALELGGKNPNVIFADANFDVAVDNALNGAFF HSGQVCSAGSRIIVEESLHDRFVNALVERANNIKIGGPTDEKAETGPLISAEHRDKVAAY VDKAREQGAKILTGGRIATSEDTNGQHGTGNTDLGAGVYYLPTIIDGATREMDCVHDEAF GPTVTIETFTTEDEAIAIANDTEYGLAGAVFTTDAGRAERVARALRHGTIWINDFHPYLP QAEWGGYKQSGNGRELGPTGLAEYQEHKHVYQNLSPAAWDQFGLQ >gi|227860884|gb|ACLH01000036.1| GENE 30 25169 - 27418 2487 749 aa, chain - ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 68 733 12 671 677 632 48.0 0 MAKHGPLDSGEPSTAHESNSLATQASDTPTQTKGTKRRIPRYQVRALVGSYKAETGDDVG AGEVPVPKTNWPVFAISGLLIIAMVLYAGFGRESAAETLAGVTGWIGNNLGWFYVLTATI AVVFVLYVALSKAGNIRLGPDHSRPKFNTFSWVSMLFAAGIGVDLMFFAVAEPVTMYMAP PVGEGETMEAAKEAVVYAMFHYGLTGWALYALMGMAFGYFAYRLNMPLAIRSALYPLIGK RVHGPIGSAVDVAAMLGTVFGVTASLGIGVVQLSYGIHLIFGFEQGFGLQAALIIIAITI ATLSAVSGVDKGIRFLSELNVYLAIALMIYIVVFGKTAYLFDAIVTNIGDYVSKFPSWTL ETFAFAEDQASTDAWMQAWTLFFWAWWIAWATFVGLFLARISRGRTLRQFIFGTLTFPFL FILMWMSFFGNTALDMVRSGDYPEFAENAINVPEQGFYDMLQEFPGSTIVIFLTTFIGLL LYITSADSGALVMSNFTSRITDNRQDGSRWLRIFWSVTVGALTLALLQIDGIATVQSATV VMGLPFAFVVYLIMFSLWKSLRLESIQADARSTALHGVISSRTEREPADSNRWKNRLDRA NTFPSKKEMDTYLRDTATYALEQVATHMRTRGYDAILLTSELPDVELPQLDLEVRLHNER KFRYQLFPVAAERPDFIEGGEDEYYRLEVYDMTGSLGYDVYGYSENQIINNVLDLYERHL AFLYMQQTQPGESDVSDGAEPERTWREDS >gi|227860884|gb|ACLH01000036.1| GENE 31 27750 - 29525 1836 591 aa, chain + ## HITS:1 COG:SA2405 KEGG:ns NR:ns ## COG: SA2405 COG2303 # Protein_GI_number: 15928198 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Staphylococcus aureus N315 # 22 565 9 551 569 717 63.0 0 MGILNKLTKKRSAKKVTDEVCDVVVVGGGSAGSVIAARLTEDKDIRVLVLEAGRPDSLWD LFIHMPSAFSFPIGAKNYDWMYESDPEPEMNGRRVYHARGKVLGGSSSINGMIFQRGNPM DYEKWGMNPGMEKWDFAHCLPYFNRMETAAAAEPNDPRRGHEGPLYLSRGPATSELFQAL FKSVQEAGYNLTNDVNGYRQEGFAPFDRNIKNGKRWSAARAYLYPNQKRENLEIRTRAFT TKVLFEGQKAVGVEYEWQGGVHRVYAEKVVLSAGAINTPQLLEVSGIGDRELLKKHGIDV VKHLPGVGENLQDHLEVYIQYETTKSTASSQPYLDKWRWPFMGLQWLLNKKGPVATSHFE GGGFVRSNENEDYPNLMFHFLPMAVRYDGQKADVKHGFQWHVGPMFSDTKGHVHIKSADI HEKPSILFNYLKTDQDRREWVEAVRVARSLLDTKAMEEVGAREFSPGPDVQTDEEILEWV RNDGETALHPSCTAKMGAESDPMAVVNPDTMGVWGVEGLYVADASVFPSVTNGNIYAPTM MVGEKAADLIAGRTPLAPNNAKWYKAKTDMPLYAEGEAVRDHKHSIKGADH >gi|227860884|gb|ACLH01000036.1| GENE 32 29705 - 30325 423 206 aa, chain + ## HITS:1 COG:Cgl0146 KEGG:ns NR:ns ## COG: Cgl0146 COG1280 # Protein_GI_number: 19551396 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Corynebacterium glutamicum # 3 201 12 215 226 128 40.0 7e-30 MGVWFAAMASPGPDVVQIIRLGARSTRAAVWAAIGSTTGLMIWTVASLAGLTALISAHPE ILVALQVAGGSYLLWMAFSAISSGIKERRAPATMNPQPRGFTPDGIIRLGTAYRMGLVSD LSNPKVLIFFGAIFANFIDPGMGLSANATVGSVLIVESLIIFVGVALCTRAVSKWMAKNS ASVDIFSGIVFALLGVIILAEGILAL >gi|227860884|gb|ACLH01000036.1| GENE 33 30315 - 30623 226 102 aa, chain + ## HITS:1 COG:Cgl0147 KEGG:ns NR:ns ## COG: Cgl0147 COG2501 # Protein_GI_number: 19551397 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 13 102 5 97 97 109 63.0 1e-24 MRFELGMLVNMLEVSIRGESIKLGQFLKLASLVATGGEAKELIEQGQVTVNGEVTKQRGA TLALGDVICVSDTCARVVEDDDDYFDEATADDDFDPEKWRNL >gi|227860884|gb|ACLH01000036.1| GENE 34 30623 - 31327 762 234 aa, chain + ## HITS:1 COG:Cgl0148 KEGG:ns NR:ns ## COG: Cgl0148 COG3324 # Protein_GI_number: 19551398 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Corynebacterium glutamicum # 1 222 1 251 284 204 50.0 1e-52 MPAFEAEVGMPYWITLASSDVKASEKFYSAVLGWEFEDGIARLQGLPIAEIVPGQDTWAT YFLSRDLEADCARVEQLGGKILALGAPLALVLDKSGAMFGLTQPELDRFVAGGEPGTPVW HELTVSEDFHSAMDFYGELFDWEIRGDEHYAVAEEEGAAFAGFWHAEGLPSFWQTYLGVR DIDQAAKAVVDNGGKIIREPHDSPFGRLCLIEDSTGAALTLCEVEDAPEEPIEL >gi|227860884|gb|ACLH01000036.1| GENE 35 31643 - 32713 558 356 aa, chain - ## HITS:1 COG:no KEGG:cauri_0093 NR:ns ## KEGG: cauri_0093 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 356 70 425 425 716 100.0 0 MGIYRLRELPQLKALQDTCYLLDLPALIAIDQVMAKLGQPSAEVVASIDTSLARWFTPTK PNQAFPTTSQIRRRMRDLVKVHDDSIAVEDTRPKNRYSILTRAQRATIELEVDSSVGVII HEAIKAAAEKHEVSMAEALILLITGKVEPEAARVVLHTYQANDVEDAPVYVEGHGWQAGN IPARAVTKRDLSTKPEASKSYGPSTMVRKYVEGRDGTCRAAGCGMPAWLCQLDHRINYTD GGPTHPDNMVALCQHHHNMKTDGRAFYILDPDTGDVVWLFEDGTWAITEPSGPLAPKNKR WARSVAQDIEGFRARKHREAQELKTELDKEQQEAVHHAHTEKAENKESEGGEEIPF Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:19:46 2011 Seq name: gi|227860883|gb|ACLH01000037.1| Corynebacterium aurimucosum ATCC 700975 contig00092, whole genome shotgun sequence Length of sequence - 39868 bp Number of predicted genes - 47, with homology - 44 Number of transcription units - 24, operones - 13 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 59 - 901 786 ## COG2339 Predicted membrane protein 2 1 Op 2 . - CDS 898 - 1389 526 ## cauri_0097 hypothetical protein 3 2 Op 1 . + CDS 1432 - 3348 2227 ## COG3590 Predicted metalloendopeptidase 4 2 Op 2 . + CDS 3362 - 4171 774 ## COG0657 Esterase/lipase + Term 4182 - 4208 1.0 5 3 Op 1 . - CDS 4175 - 7519 4082 ## cauri_0100 arabinosyl transferase C 6 3 Op 2 . - CDS 7551 - 9491 1907 ## cauri_0101 arabinofuranosyl transferase A 7 3 Op 3 8/0.000 - CDS 9530 - 10288 1088 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 8 3 Op 4 . - CDS 10303 - 11718 2186 ## COG0277 FAD/FMN-containing dehydrogenases 9 4 Tu 1 . - CDS 11867 - 12145 321 ## cauri_0104 hypothetical protein - Prom 12281 - 12340 1.7 10 5 Op 1 . + CDS 12182 - 12604 564 ## cauri_0105 hypothetical protein 11 5 Op 2 . + CDS 12613 - 13500 854 ## cauri_0106 hypothetical protein 12 5 Op 3 . + CDS 13533 - 13922 515 ## COG2246 Predicted membrane protein 13 5 Op 4 . + CDS 13925 - 14380 431 ## COG2246 Predicted membrane protein 14 6 Op 1 . - CDS 14377 - 15282 1063 ## COG1216 Predicted glycosyltransferases 15 6 Op 2 . - CDS 15343 - 15750 732 ## cauri_0110 hypothetical protein - Prom 15879 - 15938 1.6 - Term 15815 - 15851 6.3 16 7 Tu 1 . - CDS 15971 - 16273 422 ## cauri_0111 putative secreted protein - Prom 16500 - 16559 2.5 + Prom 16459 - 16518 1.8 17 8 Tu 1 . + CDS 16541 - 17134 290 ## PROTEIN SUPPORTED gi|237671477|ref|ZP_04531449.1| acetyltransferase, ribosomal protein N-acetylase + Term 17187 - 17214 -0.9 - Term 17032 - 17075 2.2 18 9 Op 1 26/0.000 - CDS 17137 - 17934 1177 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 19 9 Op 2 . - CDS 17947 - 18858 1158 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 20 10 Tu 1 . + CDS 18995 - 20206 1162 ## COG0520 Selenocysteine lyase 21 11 Op 1 . - CDS 20203 - 21159 1011 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 22 11 Op 2 . - CDS 21175 - 22071 668 ## COG0492 Thioredoxin reductase - Prom 22253 - 22312 80.3 + TRNA 22225 - 22312 71.3 # Ser TGA 0 0 23 12 Tu 1 . - CDS 22326 - 22610 111 ## gi|262183201|ref|ZP_06042622.1| hypothetical protein CaurA7_04350 - Prom 22666 - 22725 2.6 24 13 Tu 1 . + CDS 22609 - 22806 244 ## cauri_0118 hypothetical protein + Term 22831 - 22870 0.9 25 14 Op 1 . - CDS 22886 - 23155 214 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 26 14 Op 2 . - CDS 23165 - 23443 182 ## cauri_0119 hypothetical protein 27 14 Op 3 . - CDS 23480 - 24223 742 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 28 14 Op 4 . - CDS 24228 - 24959 686 ## cauri_0121 hypothetical protein - Prom 25036 - 25095 2.4 29 15 Tu 1 . + CDS 25358 - 25672 319 ## cauri_0123 hypothetical protein 30 16 Op 1 1/0.500 - CDS 25810 - 26835 1245 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 31 16 Op 2 7/0.000 - CDS 26832 - 27251 366 ## COG0314 Molybdopterin converting factor, large subunit 32 16 Op 3 3/0.250 - CDS 27241 - 27711 495 ## COG0521 Molybdopterin biosynthesis enzymes 33 16 Op 4 . - CDS 27708 - 28859 1254 ## COG0303 Molybdopterin biosynthesis enzyme 34 17 Tu 1 . + CDS 28900 - 29154 205 ## cauri_0128 putative molybdopterin converting factor 35 18 Op 1 . - CDS 29151 - 29522 387 ## COG1950 Predicted membrane protein 36 18 Op 2 . - CDS 29544 - 30602 1584 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 37 18 Op 3 . - CDS 30613 - 32286 2355 ## COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes 38 18 Op 4 . - CDS 32300 - 33781 1728 ## COG1113 Gamma-aminobutyrate permease and related permeases + Prom 33648 - 33707 1.9 39 19 Tu 1 . + CDS 33811 - 34965 979 ## cauri_0133 hypothetical protein + Term 35109 - 35159 10.7 + TRNA 35011 - 35102 51.9 # Ser GCT 0 0 + Prom 35013 - 35072 80.3 40 20 Op 1 . + CDS 35279 - 35584 141 ## + Prom 35702 - 35761 2.3 41 20 Op 2 . + CDS 35828 - 36265 348 ## gi|262183218|ref|ZP_06042639.1| hypothetical protein CaurA7_04435 42 21 Op 1 . - CDS 36845 - 37207 418 ## cauri_0136 hypothetical protein 43 21 Op 2 . - CDS 37204 - 37779 569 ## cauri_0137 transcriptional regulator, TetR family 44 22 Tu 1 . + CDS 38038 - 38313 74 ## 45 23 Tu 1 . + CDS 38437 - 38574 161 ## + Term 38581 - 38629 3.0 46 24 Op 1 . - CDS 38723 - 39115 499 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 47 24 Op 2 . - CDS 39136 - 39867 877 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family Predicted protein(s) >gi|227860883|gb|ACLH01000037.1| GENE 1 59 - 901 786 280 aa, chain - ## HITS:1 COG:Cgl0156 KEGG:ns NR:ns ## COG: Cgl0156 COG2339 # Protein_GI_number: 19551406 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 275 1 284 321 192 39.0 7e-49 MSKIFRVTLWVFIGVCLPAALINLLGSFIVAPLPGLISLLIGLAFTALGLYLWHLSPMWA SPAKGWATASVLWGAGTAVSLALLSALPFTSLTKGVGWEESMMSWSGAYPEEFAKALGVV FVLLSFRQLNRPWHGFLVGALIGWAFDVFENVLYASLGAVMHPTSDWIGMLQMWGLRLVA GPGLHMSLTAIAGFGIGWAIYAAHKTWWWRLGVGVGALFVSFCLHFAWNYMWDETWQLVT QYVVVALILYPAVITLGIRAHRLAKTDDTYSHSPGATSLQ >gi|227860883|gb|ACLH01000037.1| GENE 2 898 - 1389 526 163 aa, chain - ## HITS:1 COG:no KEGG:cauri_0097 NR:ns ## KEGG: cauri_0097 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 163 1 163 163 319 100.0 2e-86 MTSYRFPPARMTGPFFAVLGATLLVLGTPAVLSLALPEHEPEIEPVVLDDPEWRQPIDGV ECSVNYESVANQAWDCGDTLVEAYLTSDVDDDELALRRAVRATTFGSMPKEEVENHDGIL VLRTYTYIPVVAFSVAKDNLNYELIFSEGNPEELADQFMEAFK >gi|227860883|gb|ACLH01000037.1| GENE 3 1432 - 3348 2227 638 aa, chain + ## HITS:1 COG:Cgl0154 KEGG:ns NR:ns ## COG: Cgl0154 COG3590 # Protein_GI_number: 19551404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Corynebacterium glutamicum # 1 638 1 642 642 914 71.0 0 MKDLYQFVNGPWIESHVIPDDRGVDGTFHALRDEAEVLVHDIVKEDTGRPGIVYSSHMDV EGVNAAGTAPLSEDLDKLVAADPEELAHNLGVLEREGVGAPVTFWVEKDSGSEEAVAYII QSGLGLPDEAYYREEAHAETLADYEKHVAAMLGFLDPARLFGLGADAAAKRIVNLEKEIA AGHWDVVASRDAVKTYNPVDVAKLPSITRAILQGGGLPEHRAVAMMPSYFEHLEGLFTAG RMADWQLWATWRILLSRAPYLTEEIGKKNFEFYGTKLSGATEQRDRWKRAVGLAENMVGQ EIGKVFVDKHFPPSSKSEMDELVEYLTAAYRERISQLEWMTPATRERALEKLSQFKAKIG YPDTWRDYSDLEFSPKGADLVANVRAGNAWNHDYELAKIGKPADRDEWFATPQTVNAFYN PVVNDITFPAAILRPPFYNPEADAAENFGAIGAVIGHEIGHGFDDQGSQYDGQGNLNSWW TDEDRAAFEKLTAKLVDQFQGQVPKVLEGTDSAGVNGSFTLGENIGDLGGLGIAVVAYKN YCADKGLDINGQVAPFEAEGAEPELAEHEYTGLQRFFLAWARVWRTAIRPEMATQYLAID PHSPAEFRCNIIAENIDEFYEAFDVEGGLAPEERVIIW >gi|227860883|gb|ACLH01000037.1| GENE 4 3362 - 4171 774 269 aa, chain + ## HITS:1 COG:Cgl0151 KEGG:ns NR:ns ## COG: Cgl0151 COG0657 # Protein_GI_number: 19551401 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Corynebacterium glutamicum # 5 269 30 298 302 293 61.0 3e-79 MSEYQLSPEQQLEQLSSYMEVHYPLPDFRPPWAGGGSPDADRYCALLPDRIVQASMMVLG SAVDHSLPGTAFTEGVSVENSEVGAIFVPSEQNGRWAVSLHSGGWWRGDGKALEMQWRPE VAAAAQLSGTTIIDVDYPLAPEHTVAEMVQSVQAAVDYAREHGAERVTVWGYSSGGALAA LVPADALLLTFPDFGALAKLPEEIRGEYALDEAALPAAYSDILVQTATQDEIAERVEIPG AQTAEYVSMHRISTPAVARQRIKDSAEFL >gi|227860883|gb|ACLH01000037.1| GENE 5 4175 - 7519 4082 1114 aa, chain - ## HITS:1 COG:no KEGG:cauri_0100 NR:ns ## KEGG: cauri_0100 # Name: embC # Def: arabinosyl transferase C # Organism: C.aurimucosum # Pathway: not_defined # 1 1114 1 1114 1114 2212 100.0 0 MSDRKTSSLRAPQSLRLTAIIAGFIGFLCFVATPLLPVNQTQSSFDWPQQGSLQSINAPL ISVAPEEIDAEIPLEAVDKLRDGQDLLYGTVPPESKKASNRGMFVRAGEDGLSVTSLDEV IFSLTAEQVAKLPEDATLSIASTEDGTTVSVGKHKKTTEEDLRPQVTGVYTEIDDTPENL AELGDDLRIHVEINSRFTSSPTPLKLIAMWLGLAMVVISLVCLWRIDRLDGKRLGFMPET WKQIRPLDGVVAAVLGWWYVFGANTSDDGFILTMGRVSDHATYMANYYRWYGVPEAPFGA PYYDLVAWLAQFSSASIIVRLPSLISALIIWFVLSREMLPRFGARVNERRLAHWTAAFMF LAFWLPYNNGVRPEPIVALGVMLTWASFERAISSQRLLPAAVGTIIATITLAAGPTGLTA VGIFLVCLPALFRIMGTRAPEVTWPALIAPFLACGTAVMVAAFGDQTLASVIESTRVRSA VGPSLPWYSEFVRYSTLFEPSVDGSLTRRFAMFTMLFCLALIIYAFIKNHRVVGAEADPT KRLLAIMALSAFFLMFTPTKWTHHFGIYAGIAGVIAALGSVVLSQIAMRSPRARTFSIAA VIFLLAISLGGWNAWWYVSSFGIPWWDRTVQFKAIEANTVVLAIGMVVLAIGLYQSLVHS YRKNKAEADGTLAEFEAANAAKVSRWAGAMSAPIAVACILIVAFSCASFAKGYVAQADSY SVGKGNLASLRGDVCSLADATLVETNTNDSFLTPVTGELKDSLVDPKEDNFGFGPNMIKE DIEPENLNSASVGAIANTTGDDSAASNEQKELTESEEKATEVTDSSAGGVRGTLGVNGSE MHLPFNLDYTKVPVMGSYDESQRSTATITTQWYNLPEPGENTPILAVSAAGKIYHHDVNG VEQEGTELTLEYGTLKDGKVTNKGEAELSDVGATPKWRNLRIALDELPEEANVVRLVAVD DSTDEDDWMAFTPPRVPELATINSQFDSSTPALLDWSVALQFPCQRTFDHYAGVTEIPEF RILPDAAAQTSLTDFQSFSGGGALATAEAVNYSYEIPSYLNNDWARDWGAIEKYELRTNS QGEEPLKADIDQEIIQRSGLWKNSEMKIRPEGEQ >gi|227860883|gb|ACLH01000037.1| GENE 6 7551 - 9491 1907 646 aa, chain - ## HITS:1 COG:no KEGG:cauri_0101 NR:ns ## KEGG: cauri_0101 # Name: aftA # Def: arabinofuranosyl transferase A # Organism: C.aurimucosum # Pathway: not_defined # 1 646 1 646 646 1182 100.0 0 MTESPTMSSPTIEYEADRLSRRASLVGIAAAALGGGLVTLIGFFTFKTVSLPAFSTSMVT RALSTAGTALTVLLVGALCAWWVIGASPRPRWRTWLTTAVCYISPALLTLTSIGLPLSAS RLWLDGVQVDQVFRTQFLTRAAEASSYADMNYEGLPTFYPLGWFWMGGRLANLLNMPGWE VYQPWSLISLAVAGCILVPLWQRLSGSLPVATAIALTTMAVTLTIGAEEPYSAVIAMGVP AVAVLCSHAFYRASWFSTAAIAIYLGVSACFYTLYTGAVALTIVSLIALVTGVAERTWAP LVHLVTIAAGSLAIAAIAWGPYLYGVLHAAAPLESTAQHYLPEEGTQIPAPFLSLSVIGI LSLIGLIYLVMRIDEPEIRALSTALVGTYLWTLASMVMTLAGSTLLGFRLELIVVVLFAT AGILALADVRLMGLPTLYPEGFSEATNKRVTLAFAILMGLGGVYYAQQIPATNVTALDHA YTDTDGYGERADRYTSDSSANYGQIREFIDAQGYEANDTVVLTDEKLFMAYNPYYGFNAF TSNYANPLGEFSTRNLQIEEWASKSWEQTPEEFAKSLESAPWRGPDVLIFRGDLEEPGDG YKTHLAEDIYPNQPNVRYRAVFFNPEVFEEGWNTQQIGPFVVAARS >gi|227860883|gb|ACLH01000037.1| GENE 7 9530 - 10288 1088 252 aa, chain - ## HITS:1 COG:Cgl0190 KEGG:ns NR:ns ## COG: Cgl0190 COG1028 # Protein_GI_number: 19551440 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 1 252 1 253 253 317 68.0 1e-86 MLNAVGQAQHILLLGGTSEIGLGIVEEFLERGPAKVTLAARADSPRIADARATIESRGGD VEVIDFDATDFEGHGDVVNRAFERGDVDVAIIAFGTLGDQEELWQDQAKAVASAQTNFTA PVSLGVLLGQKFQQQGHGTIVAISSVAGMRVRRSNFVYGASKAGVDGFFINLGEALRGSG AKVLVVRPGQVRTKMSAEAGEAPLTVNVSDVAKATVKAVLDGKQSIFVHPLFEYVSLGFK FIPQAIFRKLPF >gi|227860883|gb|ACLH01000037.1| GENE 8 10303 - 11718 2186 471 aa, chain - ## HITS:1 COG:Cgl0191 KEGG:ns NR:ns ## COG: Cgl0191 COG0277 # Protein_GI_number: 19551441 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Corynebacterium glutamicum # 8 470 25 487 488 863 89.0 0 MELHTTEKSLHGWGRTAATTAHVLSTPDVDVIKTAVAQVAEDNADKPSHLRRGVIARGMG RSYGDPAQNAGGLVIDMQPLNKIHSIDPESGIVDVDGGVTLDQLMKAALPYGLWVPVLPG TRQVTIGGAIGPDIHGKNHHSAGSFGDHVTSMELLVADGRVLHLAPEGSEDDPSGDLFWA TVGGMGLTGIILRAKIKMTKTETAYFIADTDRTDNLDETVAFHSDGSEHNYTYSSAWFDV ISPEPKLGRSTISRGSLATLEQLEELAPKLAKDPLKFNAPQLMTVPDIFPNFTMNKLSLM AIGEAYYLMGAPARNQVKNLTQFYQPLDLIGEWNRGYGSNGFLQYQFVVPTDAVEPFKDI IRDMQKSGHYSALNVFKLFGPGNKAPLSYPMPGWNVCVDFPIKPGLGAFLDDLDKRVMEF GGRLYLAKESRTSAENFHKMYPGLEGWLKTRNDIDPTGVFASDMSRRLELH >gi|227860883|gb|ACLH01000037.1| GENE 9 11867 - 12145 321 92 aa, chain - ## HITS:1 COG:no KEGG:cauri_0104 NR:ns ## KEGG: cauri_0104 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 92 1 92 92 155 100.0 6e-37 MYSSKKEHLTPAQRAAQDERAEDDKRHGHFLATEHTSLPLNGFMTRLIAEELPILDSTSR GRVYEILRAYEGPEISSQEELPEEIREIMDLY >gi|227860883|gb|ACLH01000037.1| GENE 10 12182 - 12604 564 140 aa, chain + ## HITS:1 COG:no KEGG:cauri_0105 NR:ns ## KEGG: cauri_0105 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 1 140 140 264 100.0 7e-70 MTSPKQDNYALDDTLAGRITQAAAVGIMTAFPDWIKNKTALVFAYVLSFLGFGALVAITN AESHEDRPEPETPDVPVWAIPVAFGILLLGGWITVKTERSVVRFIRRRGVAKPWTVWGGI SAAIVFILSELEARELTARN >gi|227860883|gb|ACLH01000037.1| GENE 11 12613 - 13500 854 295 aa, chain + ## HITS:1 COG:no KEGG:cauri_0106 NR:ns ## KEGG: cauri_0106 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 295 1 291 291 578 100.0 1e-163 MVGHMSSKVTDLAQVRANRGDSARTLLCQVSNVRADAEVHRQIGFSDALTLEELHHILEI CFGLPHEDSPWHFFEHTEARGQRIDPSHTVREFLSREGEQVDYAWGLWDFEIVVVETYPR DSGTPEALCVGGSGSFQTPFDLTAVNAELTGQETIDEVLDLVASPVRALIERTRLCDFVP LLQALDLKREVSIEAEVFRQLRTLPREVTNEGKDAFWSMALALSCMGGRELTDSVAETSM AALGWVDDDGEELHGSAIRELCSASLKVLSSLGAYGENAVAPVDRLDIYRALVRG >gi|227860883|gb|ACLH01000037.1| GENE 12 13533 - 13922 515 129 aa, chain + ## HITS:1 COG:MT3897 KEGG:ns NR:ns ## COG: MT3897 COG2246 # Protein_GI_number: 15843411 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 127 17 140 142 77 45.0 6e-15 MKTQLVRFVSVGVFTAAIDYGLTLFLTYLGLHRSLAKAIGWVFGTIAAYVANARWTFGAQ VSGRTAGAVGLLYLSTFAVQNFLYWVLNAPLISLGFDGALKDTIAFVIAQGVATVTNFAI QRAFIFKGK >gi|227860883|gb|ACLH01000037.1| GENE 13 13925 - 14380 431 151 aa, chain + ## HITS:1 COG:Cgl0196 KEGG:ns NR:ns ## COG: Cgl0196 COG2246 # Protein_GI_number: 19551446 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 10 143 11 142 144 95 47.0 3e-20 MPGRAERLSRSNSLQAQGTKFAITGAIAALIDVSLTWLFQIGLGVFGDVASRTVGFSAGT FVAYLLNRRWTFNARASKRRFAAVFATYAMTYAINIVLYRWAFPFFDHTLDWPSSWALAV AFVIAQGTATLINFFVQRWVIFRSTRKSFEF >gi|227860883|gb|ACLH01000037.1| GENE 14 14377 - 15282 1063 301 aa, chain - ## HITS:1 COG:Cgl0199 KEGG:ns NR:ns ## COG: Cgl0199 COG1216 # Protein_GI_number: 19551449 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Corynebacterium glutamicum # 2 301 4 310 310 427 72.0 1e-119 MTATLSQAGTTAAVIVTHQRVELLRASLEQVVNQTHPVQWVIVVDNGAEAAVEDLLHELA GERAVYVPSETNLGGAGGFALGFLTALALGADAVWCADDDGRPADHHVLEELYRVAENNA LHEVSPAVCNINEPAKLAFPLRQGLVWRRYMSELEGDFLPGIASLFNGALISAEAMEIIG VPDYRLFIRGDEVEYHRRLVNSGLNFGTALTTSYLHPDGSDEFKPILGGKMHTQYPKGEF KRFFTYRNRGYLLWQRGMRKLLPQEFARFGWFFIVQQHDVKGFMEWLRLHNRGRKEDFRR P >gi|227860883|gb|ACLH01000037.1| GENE 15 15343 - 15750 732 135 aa, chain - ## HITS:1 COG:no KEGG:cauri_0110 NR:ns ## KEGG: cauri_0110 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 135 1 135 135 173 100.0 2e-42 MKRFTAAAVAAATALSLSIAPATAAEKGSSEVSEGEVFGYILKQGLKEAVGGDGYASSVN YGIEKGAEAISSKGSSTPEEIKEGLETAGSAKEYPVGTTAEILVGTSIAAIVLGLIAGVV NAVNSGLIKVPGFNA >gi|227860883|gb|ACLH01000037.1| GENE 16 15971 - 16273 422 100 aa, chain - ## HITS:1 COG:no KEGG:cauri_0111 NR:ns ## KEGG: cauri_0111 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 100 1 100 100 150 100.0 1e-35 MKRFAAGVVAAATALSLSTGVASAAGDPNAKNGSSNDAYTTGYVIGGILKEAAGQDGMTS SVENILENREDDQSRTPLFSSFKADAANGWTVGTTFDILW >gi|227860883|gb|ACLH01000037.1| GENE 17 16541 - 17134 290 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237671477|ref|ZP_04531449.1| acetyltransferase, ribosomal protein N-acetylase [Brachybacterium faecium DSM 4810] # 12 196 13 217 218 116 34 2e-25 MTERSVEEMWAPFRVSIHVGDLTLRVLRDSDIAAIHGVTAAEIFGEPLPEYTFPWLKQKP DPSFRWAHRAQMSPEEWSLDFGVHLGGEVIGSVDLRAQNFPDNHEVVTGSWLYHRLQGRG IGTQVRHAAAVFCFNYLGAHRLRSEWEPGNEASQAVSRKLGFAIEGNKAVLRKEDYQPGP EVTVAGMSEELREMLGY >gi|227860883|gb|ACLH01000037.1| GENE 18 17137 - 17934 1177 265 aa, chain - ## HITS:1 COG:Cgl0201 KEGG:ns NR:ns ## COG: Cgl0201 COG1134 # Protein_GI_number: 19551451 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Corynebacterium glutamicum # 1 263 1 263 263 433 82.0 1e-121 MVSIDTYNACVDFPIFDAKSRSLKKAMLSTAGGSIGKNDQNVVMVEALKDINLHLREGDR VGLVGHNGAGKTTLLRLLSGIYEPTRGAADVRGRVAPVFDLGVGMDPEVSGYDNIIIRGL FLGQTIKQMKAKMDEIAEFSELGDYLSMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGI GAVDAAFMAKARVRLQDLVKRSGILVFASHSNDFLAQLCDTALWIDHGQIRSVGEVSEVV GEYEGPEVGQYVRDLRKRFDNEENV >gi|227860883|gb|ACLH01000037.1| GENE 19 17947 - 18858 1158 303 aa, chain - ## HITS:1 COG:Cgl0202 KEGG:ns NR:ns ## COG: Cgl0202 COG1682 # Protein_GI_number: 19551452 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Corynebacterium glutamicum # 5 303 4 301 301 400 67.0 1e-111 MRARVKDVQDKKNLRDDVARMTSAPAPGEEPASRSMTMSAAFADLLQGARQRELWFKLGI QDIKQRYRRSVLGPFWITIATGVMAAALGLLYSMLFQIPVAEFLPHVTVGLIMWNFISGA IKEGSTVFIDNEGLIKQLPAPLSVHIYRLVWRQTLFLGHNLIIWLLLILIFPRHLGWEFF LFIPALGLFLVNGVWVAMFFGIIATRFRDVAPLLEALTQLLFYVTPIVWMTNTLKDQGGA VASRARIAEINPLYHYMEIIRAPMIGEPVAGYHWLIVIGCTVAGLLIAGLAMRQWRFRVS YWV >gi|227860883|gb|ACLH01000037.1| GENE 20 18995 - 20206 1162 403 aa, chain + ## HITS:1 COG:Cgl0203 KEGG:ns NR:ns ## COG: Cgl0203 COG0520 # Protein_GI_number: 19551453 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Corynebacterium glutamicum # 5 403 13 401 401 328 48.0 1e-89 MTEQYDVASVRGLYTGLSDGWTYLNAHAAPQIAERVASGVARSFRMSATVKPLEDAVGAH SAHHDPGELHAADMYASARRAVADLTGATAERVILGPSLPVLYQALGAALRPLLRRQSSV VLSRFDSPEFTSAFAQLGTDIRWAQPDLGTGELPAFQYADLVDGSTRFVAFSGAHELLGT VTPASEIIDSVHERSRAWVLVDVSSIAPYRLLDFDAIGADILGVDVGALGGPQMAALVFR DTAMFRRLDEIVVGPVSAGLAGGVGPLVDHLAELAGGERGSRRVRLTRSMQALSGYMEEL TGDLYSLLGTLPAVHILGVTGEAAADASDDRLPRLTFAVRDVPADVIHRRLFDNGLVTTI APHTPLLTEMGVEEVGGAVTVSLSPFSTYHDVEHLTRVVASLA >gi|227860883|gb|ACLH01000037.1| GENE 21 20203 - 21159 1011 318 aa, chain - ## HITS:1 COG:Cgl0204 KEGG:ns NR:ns ## COG: Cgl0204 COG0604 # Protein_GI_number: 19551454 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 318 9 326 326 363 65.0 1e-100 MKAIIQTNLEDPHSLELGETNKPQLQDGEVLVKVKAAGVNRADLLQARGHYPPPPGASEI IGLEVAGEVVDAGDTDIEVGSKVGALLAGGGYAEYVAVPKGQLLPIPSGYSFAEAASVIE VACTVWSNIAMEAELDKGQTILIHGGAGGIGTFAIQVAKQLGATVAVTAGSAEKLATCKE LGADILINYNEQDFAEELKNQCDVILDIMGAKYLKKNLIALAKGGHMVTIGMQGGTKAEL NMGVLLNKRLTLQGTTLRSRSLEGKAAIVADTVKNVWPWLEDGSVKHHLHATYALARAAE AHQALDSGKVTGKLVLEV >gi|227860883|gb|ACLH01000037.1| GENE 22 21175 - 22071 668 298 aa, chain - ## HITS:1 COG:AGc2995 KEGG:ns NR:ns ## COG: AGc2995 COG0492 # Protein_GI_number: 15888936 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 293 44 338 338 169 34.0 9e-42 MQTVDTLIIGGGAAGLQAALVMVRARRSILVVDSSTPRNRFAHEIHGVIALEGTPPLEFQ ERGKKQLRSYGVTIANATVDSVTDNDRTLTATLSNGETVAARSIIVASGVDDVHPDIPGL EENWGNTVLHCPYCHGFEVADKKLGVLCIGEFSLHHAALLRQWSKDITFFTNGMELTEEQ RADLTRRGLALVDGPVTAFQDGKVLVGSTPHAVDALFYMPVPHPHDEFLTDLNLERHSPP PAMGGSLIKVGPAGATSHPRVWAVGNVVNPPAQVAVAMGEANAAAIAVNAFLVEDDWI >gi|227860883|gb|ACLH01000037.1| GENE 23 22326 - 22610 111 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183201|ref|ZP_06042622.1| ## NR: gi|262183201|ref|ZP_06042622.1| hypothetical protein CaurA7_04350 [Corynebacterium aurimucosum ATCC 700975] # 1 94 1 94 94 160 100.0 2e-38 MLYLVPGALAGIVFYAILTAVSWAIGKAWPQRRLSAHSRLTIHCVAAVAFSIFLAVAGGG GNWATHLQISGFLLAGCVLSFVTAAQDKKQSLNK >gi|227860883|gb|ACLH01000037.1| GENE 24 22609 - 22806 244 65 aa, chain + ## HITS:1 COG:no KEGG:cauri_0118 NR:ns ## KEGG: cauri_0118 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 20 65 1 46 46 90 100.0 2e-17 MDSSPLGGNNGCGKEGGFVMSEDNYSAWVETDYLFGSPVNARRLLESYEQVLDGKAKEHD IDLDV >gi|227860883|gb|ACLH01000037.1| GENE 25 22886 - 23155 214 89 aa, chain - ## HITS:1 COG:asl4561 KEGG:ns NR:ns ## COG: asl4561 COG2026 # Protein_GI_number: 17232053 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Nostoc sp. PCC 7120 # 6 89 3 86 87 69 45.0 2e-12 MADSTYHITYKASAAKELRKLDRPTQRRLLAAIEDLAVTPRPDGVKKLKASDDLYRIRVG HYRVVYEILDGKLVVLVLRVAHRRDVYRK >gi|227860883|gb|ACLH01000037.1| GENE 26 23165 - 23443 182 92 aa, chain - ## HITS:1 COG:no KEGG:cauri_0119 NR:ns ## KEGG: cauri_0119 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 92 5 96 96 134 100.0 2e-30 MYKMYIRRMKTMSVASSQFRQSQSQILDEAQHTPVAITSRGSRVRAFVVSPSFFARAVEA LEDREDVQTAEIARGEAVEISHEDLKKELGLT >gi|227860883|gb|ACLH01000037.1| GENE 27 23480 - 24223 742 247 aa, chain - ## HITS:1 COG:Cgl0625 KEGG:ns NR:ns ## COG: Cgl0625 COG0846 # Protein_GI_number: 19551875 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Corynebacterium glutamicum # 1 244 6 255 258 298 58.0 4e-81 MEHLFERAHSILSDATHVEVFTGAGMSADSSIATYRDAQTGIWENVDPVAMASISAWRND PKPMFAWYLWRAQLAQRAAPNAGHRAIAAARGMTVTTQNIDNLHERAGSQDVVHLHGSLF AFRCTDCDTPYDEDIALPSEPVESITPPECPVCGGLVRPGVVWFGEALPDDEWAEAERRM STADALLIVGTSGVVYPAAGLPQIAHARGIPIVEVTPQPTDLSPLADVVVTATAAESLPR ILAGRIG >gi|227860883|gb|ACLH01000037.1| GENE 28 24228 - 24959 686 243 aa, chain - ## HITS:1 COG:no KEGG:cauri_0121 NR:ns ## KEGG: cauri_0121 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 243 1 243 243 457 100.0 1e-127 MRSRQYYVATAVVCALTLVYMLLRWDSVPDPIPVHFDGSGNPDRFEPKSFLNATVLVWIG VVFAIALPLCVPPISLARKTMDVPAESTLPFSEATAQRAELLTGKTSTFIAQTVLTMTAC VCLTAVCTVIPDIPFSGFLLVAAWIAFTVFIMIQGVRLTLTSAKAVKAIPTDDDEKVRNE ALRFAGGMGVYNEPTDPMCMAVFPTNPSKLQINTAHEPGRRYLWRMGIALTASIAFCVLI AVL >gi|227860883|gb|ACLH01000037.1| GENE 29 25358 - 25672 319 104 aa, chain + ## HITS:1 COG:no KEGG:cauri_0123 NR:ns ## KEGG: cauri_0123 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 104 1 104 104 162 100.0 6e-39 MEPYVGIVVMELAKKSSSSAQSFFREDFYIVYAESEEKARERVEAMANEQADGEDVKVRH IVDVAPALYGYVDRDCDLYSRHFANLEDYERFEMKLGGTDPLAD >gi|227860883|gb|ACLH01000037.1| GENE 30 25810 - 26835 1245 341 aa, chain - ## HITS:1 COG:Cgl0209_1 KEGG:ns NR:ns ## COG: Cgl0209_1 COG0476 # Protein_GI_number: 19551459 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Corynebacterium glutamicum # 3 226 7 236 259 269 66.0 7e-72 MSSRYARQETLWGTSTQERLRASTVAVIGAGGLGSPALLYLAGAGVGRILLFDDDTVSLS NLHRQVIHSTATVGQPKTESAAAALSALNPECTVEQFSRLTPDTALDQLRGADLIIDGTD NFYSRHLASWSAHELDIPHVWASLLGYDAQLTVFHSGHGPVYEDLFPTDPQVPSCSQAGV LGPVVGVAGSALAVEALKLLTGIGTPLIGTLGYYDSLAGTWEYIPVRANGATPARPDNPT DIREIPEDATLIDVRTSPERAASLIPGSQHLPLDEILAGHNPTLDPADLAVLYCASGLRS AQAVEALRARGFRNVYSLRGGIDAWQEHISELSAEADAEAS >gi|227860883|gb|ACLH01000037.1| GENE 31 26832 - 27251 366 139 aa, chain - ## HITS:1 COG:Cgl0210 KEGG:ns NR:ns ## COG: Cgl0210 COG0314 # Protein_GI_number: 19551460 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Corynebacterium glutamicum # 22 138 36 152 152 128 58.0 3e-30 MSTNFGLLGAHISAEPITAPDIATAETGAVVLFDGIVRNHDSGRGVKLLTYTAHPSAQQE IERVAGEVAAAFPAVRLWCAHRTGALEIGESAFIVAAASAHRKDAFEAASTCADRVKAEV PIWKEQLHTDDTTTWVGLE >gi|227860883|gb|ACLH01000037.1| GENE 32 27241 - 27711 495 156 aa, chain - ## HITS:1 COG:Cgl0211 KEGG:ns NR:ns ## COG: Cgl0211 COG0521 # Protein_GI_number: 19551461 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Corynebacterium glutamicum # 5 156 3 153 153 168 62.0 3e-42 MTRRALVIVASTRAAAGEYEDRSGPILVNFLREQGFDTPQPLVVADADIDSALATAFADA PSVILTSGGTGITPDDRTVEALTPHLDRELPGLAHAFYAHSAAIPTAALSRTVAGVSGRT FAMALPGSTGAAKDGCAVLEPVLHHIINQLEGINEH >gi|227860883|gb|ACLH01000037.1| GENE 33 27708 - 28859 1254 383 aa, chain - ## HITS:1 COG:Cgl0213 KEGG:ns NR:ns ## COG: Cgl0213 COG0303 # Protein_GI_number: 19551463 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Corynebacterium glutamicum # 2 383 3 394 394 309 48.0 6e-84 MRTYEEHLAAVRAALPQPRVVSTPLTSAFGRRSAATYRAEHNLPPFDNSQMDGYALSTCD GGAFTVGRTIAAGDPPGSLEHGTALPIMTGAKIPEGTATIVPVEHCEPPHFPEEGATVTV PAAPEQFIRRAGSDVQAGTTLINEHALLDAPSIATLASQGLAEVLTYAPARILICTGGAE IGGTGEATIPDSNAPMLAALAAQYGIDVAGFVRTNDDPSALRADLAEAVITHRPDVIVTS GGISHGKFEVIRQIFEKDGWFGHVAQQPGGPQGLSRLGEVPVVCFPGNPISTLVSFRLYL APVIGHAPAPFRAHLTEPAEGLNNREQFRRGILNISDGITQASFLGGTSSHLMSQAIGAT ALIRIPANTQLSAGDLVGVFPLS >gi|227860883|gb|ACLH01000037.1| GENE 34 28900 - 29154 205 84 aa, chain + ## HITS:1 COG:no KEGG:cauri_0128 NR:ns ## KEGG: cauri_0128 # Name: not_defined # Def: putative molybdopterin converting factor # Organism: C.aurimucosum # Pathway: not_defined # 1 84 1 84 84 122 100.0 4e-27 MVDIHYFAAARAAAGRAQDTAQAATLGELLDVLRARHTGSTEAGMSFAEVLERCTFLVDG ASATEDAVLADASRVDVLPPFAGG >gi|227860883|gb|ACLH01000037.1| GENE 35 29151 - 29522 387 123 aa, chain - ## HITS:1 COG:Cgl0218 KEGG:ns NR:ns ## COG: Cgl0218 COG1950 # Protein_GI_number: 19551468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 7 119 8 135 140 61 40.0 3e-10 MKTFINFALNVIAVAVAFWAVVAIVPGIDIVPATTQNFLLIAAVFIIVNEVVTPVLRFLG APLTCLTLGLFALVINGAVLLLVSALMDSLVIDGWGAAIIGAVVLAIVSSVVNFFTSPLR VRN >gi|227860883|gb|ACLH01000037.1| GENE 36 29544 - 30602 1584 352 aa, chain - ## HITS:1 COG:Cgl0219 KEGG:ns NR:ns ## COG: Cgl0219 COG0079 # Protein_GI_number: 19551469 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 54 346 1 284 288 339 63.0 6e-93 MIRPDLSSLPAYVPGKNAEHALKLSSNEATQEPLPGALKAMETAAAHVNRYPDMGAVEIR KALAENLGVTPEQVTCGAGSSAICQQLVQITSVPGDEIVFPWRSFEAYPIFAQVVGATPV KVPLTADHRVDLEAMAAAITDKTRLIFVCNPNNPTGSIITKEELDAFLAKVPKDVIVALD EAYIEYNRNDAVPLATDYVHTHDNVIGLRTFSKAYGLAGIRLGYAFGNAEIIEALSKVSI PFSVNSVAQAGAVASLAAQKELRERTDETVKQRDRLVEHFADFGVPESQANHIWFAADSI AKLGSPQEVAAQLAENDVLVRAFPEGVRVTVTTAEETETLLKAWDAAFGAEG >gi|227860883|gb|ACLH01000037.1| GENE 37 30613 - 32286 2355 557 aa, chain - ## HITS:1 COG:CAP0025 KEGG:ns NR:ns ## COG: CAP0025 COG3961 # Protein_GI_number: 15004729 # Func_class: G Carbohydrate transport and metabolism; H Coenzyme transport and metabolism; R General function prediction only # Function: Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes # Organism: Clostridium acetobutylicum # 2 546 4 551 554 417 39.0 1e-116 MQTTIGDFILDRLKAIGITEIIGVPGDFNLSFLEQIEASEGIRFVGACNELNAAYAADGY ARQRGVGCLLTTYGVGELSALNGIAGARAEHVPLVSLAGAPPQYATEFRWNLHHSLADGD FANMLDSFAPFTEVATRVSPMNVVEEFDRALHTCLREKRPVHIQIPSDITHLSIEVPDEP FSTELAPSDPERLNAAADYVLEHLAKAKDPIILIDQDTNRHGFTEKFRAIIDKAQLPYSQ LSSGKAILSERHPLFIGTYNGAASAPGVQERIEKSDFLVTTNPRFIEVNSGSFTHNLADA RVYNFGDQHLNADGEYFVGINTLELLDVLLDRIPEAGASTSAAFEPEPFEPNPDAPLTQE RIWPQMLGFIQEDDVVIAEAGTSNIGLGQQRMPEGVQYINSTIWGSIGFTLPCVLGSQLA NPKRRHVLFIGDGSFQLTAQELSTILRQDLKPIIVLVNNDGYTIERYILGMEREYNEIQM WDYTALPKAFMKDTTMESYVASTESELAKALDDIAAHPERGAFLEVRLDAFDAPKGLQAF GPQTADFDFGPRGPRNA >gi|227860883|gb|ACLH01000037.1| GENE 38 32300 - 33781 1728 493 aa, chain - ## HITS:1 COG:ECs0614 KEGG:ns NR:ns ## COG: ECs0614 COG1113 # Protein_GI_number: 15829868 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 38 478 4 448 458 383 45.0 1e-106 MTNKTVLRNNLLQLNDPCHTYTFMKGVFMTTTNNSVKAQDVVASDNTSADDGLQRGMKSR HLQMIAFGSCIGTGLFLGSGASIQEAGPGVIAAYAIGGFIIFLIMRMLGEMAVEHPVAGS FSAYAREYIGPIAGFVTGWNWWFTTIVVGMLELTAAGTIMDFWFPGIPHWLTALVALVIV TAINLVHVGAFAEAEFWLSLIKVAALILMIVVGAAIVFGLTPEPALGLSNITEHGGFFPN GATGMLFSLVAVFFSFGGIISIGTAAGEAQDPAKSLPKAINNVIWRILIFYVGGISIIVL LAPWNELDTSTSPFVRALSTLGITAAATGLNLIVLVAAVSVFNTMTFSGARMLRDLSRGG QAPPFFNSVSAKGVPVRALLFNSLLMGSAVLLNFLFEGKILIVLLAIIVGAELISWSAIA IAHLNFRKRCPDAAFRAPLYPIANYLCLGFFALIVALMFTLPDYRTGAIVLPCWIVTLAL IWLGKKRHDARNN >gi|227860883|gb|ACLH01000037.1| GENE 39 33811 - 34965 979 384 aa, chain + ## HITS:1 COG:no KEGG:cauri_0133 NR:ns ## KEGG: cauri_0133 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 384 1 384 384 706 100.0 0 MSKVPPPQLMNIQDIVDDCAQILQRSVEVTTPAIAVIAASAQIGAIDKNRAASILNRTPP PEPIPWMLSFGIQEAVLPVRLPANPRYDMLPRVVIPLRHEDRLVGYLWIIDEPALGDAPL VRLGSLTAPLARLIDERDAPLAARAQQLGELAREVLTGDPAALAGARERDLLPSDGELTV HRVLVEGDQRAVAVELARPLVRRPFLVADSHDSLVLIECRRDDKDTEALMEELQSAALVA GAEVVARGSAPTAPQARLMADVAKLCGQDLLRWEEAGAWRLLRGWELTSATVAEMSPDAA VLLDDLRNSYWHTLLTYFEHSRNVSATANALYIHRATLHYRLDRVREILGPGVLDDGWRC AALYVALKLHAALQGKNREAPFCP >gi|227860883|gb|ACLH01000037.1| GENE 40 35279 - 35584 141 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNIDPDESFVRIRLHEDSVVAEFTIAELCSFFGINGFDCLQRQFKAWYGLDAFAWDSKLK VHCEQIPFSKYFVLSKIHECYSLQPLPEATNGVVRWGMKKK >gi|227860883|gb|ACLH01000037.1| GENE 41 35828 - 36265 348 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183218|ref|ZP_06042639.1| ## NR: gi|262183218|ref|ZP_06042639.1| hypothetical protein CaurA7_04435 [Corynebacterium aurimucosum ATCC 700975] # 1 145 1 145 145 281 100.0 1e-74 MIDSQTGWFFVHASVKVIPVLGGKVLLGLNPRGDWELLGGWPDRGDLSLRETAQRELKEE ANLETLPDTLVDAFLLRDPKVENPVAIIAYGVTVSLNEGIDISESIEHEKLGLFGKDEIS GLQNLLPEYKTVILKYLEMGGNNKS >gi|227860883|gb|ACLH01000037.1| GENE 42 36845 - 37207 418 120 aa, chain - ## HITS:1 COG:no KEGG:cauri_0136 NR:ns ## KEGG: cauri_0136 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 120 1 120 120 173 100.0 2e-42 MILESSPAWPSLLLAAILLGDAALSLKPVPFIEACLSGVKLPKDWWWALIVIKYLAAAGL IAGLWFPGVGIATMVGVIAYFCAAAAAHVRAHFLGSAFWINCLGMLALSIGVLILTLALN >gi|227860883|gb|ACLH01000037.1| GENE 43 37204 - 37779 569 191 aa, chain - ## HITS:1 COG:no KEGG:cauri_0137 NR:ns ## KEGG: cauri_0137 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: C.aurimucosum # Pathway: not_defined # 1 191 1 191 191 340 100.0 2e-92 MFTEHVHPSRSAAKAGTDSKVLATAYDLFLTQGYATTSIRTIASEAGVSVGTVMGVGDKQ TLLIRTIGQHISELHDEIRGQSDSLLDVLKPFLQMFTGHEELSRAFGAALIQQGNQGEAL TALKTLLTDEITLRLGSRLNSDDAAEYSNLLYNVYLGFLIGWAAGLYDTEQLTSQAASSI ERLNTAFGVTQ >gi|227860883|gb|ACLH01000037.1| GENE 44 38038 - 38313 74 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAGRIAARYALLRALARIFGEVYTFVYGFHFLLPNLSTTCNSRGCPSSRPSSRERDKGM YCPKKCAPLVVLIAAVSVLAPVKALPQRVGF >gi|227860883|gb|ACLH01000037.1| GENE 45 38437 - 38574 161 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWKKILATIGVILMTLSVYVQWPYAVTIALAVLVIVLVFLPSGKK >gi|227860883|gb|ACLH01000037.1| GENE 46 38723 - 39115 499 130 aa, chain - ## HITS:1 COG:PA3470 KEGG:ns NR:ns ## COG: PA3470 COG0494 # Protein_GI_number: 15598666 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 1 129 5 131 152 77 39.0 6e-15 MIEVAAVVIRNPQGHVLTVRKKSSTKYQLPGGKPEAGEALVDAALREVAEEVGLTLDAES LNELGTFDAPAANEPGEAVVGTIFTCTRTVTTDEPHAAAEIGDTAWVNPTAPDRELAHLL RDRVFPALAG >gi|227860883|gb|ACLH01000037.1| GENE 47 39136 - 39867 877 243 aa, chain - ## HITS:1 COG:Rv0924c KEGG:ns NR:ns ## COG: Rv0924c COG1914 # Protein_GI_number: 15608064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis H37Rv # 1 240 181 424 428 190 50.0 2e-48 IGFLAGLAIAPPDPADVAGGLIPRLEGKDSILLAASMLGATVMPHAIYLHSSLTKQRYPD LEIPHVLAGTRADIAVALSIAGLVNVGLLVLAGSALYGVDGTETISGAHTAIASHLGPLA GVLFAIGLLASGLASTSVGAYAGSEIMDGLLHIKVPLLVRRLVTLIPALVIIGCGVDPTM ALVVSQALLSLGIPFAIIPLFRYAGSRDVMGEFAAKPWSMAVGWTLAALVIALNLALVLL PLL Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:21:38 2011 Seq name: gi|227860882|gb|ACLH01000038.1| Corynebacterium aurimucosum ATCC 700975 contig00093, whole genome shotgun sequence Length of sequence - 42938 bp Number of predicted genes - 34, with homology - 33 Number of transcription units - 15, operones - 8 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 439 582 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 506 - 565 6.6 + Prom 492 - 551 4.6 2 2 Op 1 1/0.000 + CDS 602 - 3142 2619 ## COG1511 Predicted membrane protein 3 2 Op 2 . + CDS 3142 - 5190 2233 ## COG1511 Predicted membrane protein 4 3 Op 1 17/0.000 + CDS 5311 - 6675 1032 ## COG0168 Trk-type K+ transport systems, membrane components 5 3 Op 2 . + CDS 6668 - 7360 724 ## COG0569 K+ transport systems, NAD-binding component 6 3 Op 3 . + CDS 7421 - 7783 357 ## COG2149 Predicted membrane protein + Term 7837 - 7877 3.2 7 4 Tu 1 . - CDS 7825 - 7962 103 ## - Prom 8088 - 8147 2.5 + Prom 8184 - 8243 3.3 8 5 Op 1 . + CDS 8317 - 9891 1640 ## COG0471 Di- and tricarboxylate transporters 9 5 Op 2 . + CDS 9934 - 11001 1040 ## COG0523 Putative GTPases (G3E family) + Term 11250 - 11302 8.1 + TRNA 11168 - 11243 87.2 # Arg ACG 0 0 + Prom 11169 - 11228 77.7 10 6 Op 1 . + CDS 11413 - 11892 387 ## cauri_0149 hypothetical protein + Term 11951 - 11987 6.3 11 6 Op 2 . + CDS 12009 - 12914 922 ## cauri_0150 hypothetical protein 12 6 Op 3 . + CDS 12914 - 14053 1071 ## cauri_0151 putative protease 13 6 Op 4 . + CDS 14065 - 14253 344 ## cauri_0152 hypothetical protein + Term 14390 - 14441 1.0 - Term 14573 - 14608 4.4 14 7 Tu 1 . - CDS 14691 - 15719 1121 ## COG0287 Prephenate dehydrogenase - Prom 15831 - 15890 2.7 + Prom 15676 - 15735 1.8 15 8 Op 1 . + CDS 15759 - 16262 718 ## cauri_0154 hypothetical protein 16 8 Op 2 . + CDS 16252 - 16740 469 ## COG0590 Cytosine/adenosine deaminases 17 8 Op 3 . + CDS 16833 - 17030 473 ## cauri_0155 hypothetical protein + Term 17053 - 17096 9.1 + TRNA 17123 - 17213 64.5 # Ser CGA 0 0 - Term 17007 - 17044 2.2 18 9 Tu 1 . - CDS 17261 - 17428 169 ## gi|262183241|ref|ZP_06042662.1| hypothetical protein CaurA7_04554 - Prom 17455 - 17514 2.3 19 10 Op 1 1/0.000 + CDS 17610 - 20042 2727 ## COG2409 Predicted drug exporters of the RND superfamily 20 10 Op 2 . + CDS 20049 - 21332 1557 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 21 11 Tu 1 . - CDS 21320 - 22045 545 ## cauri_0158 putative secreted protein - Prom 22126 - 22185 1.6 - Term 22162 - 22202 10.4 22 12 Tu 1 . - CDS 22226 - 22960 847 ## COG1738 Uncharacterized conserved protein - Prom 23109 - 23168 1.8 23 13 Op 1 . + CDS 23379 - 24062 566 ## cauri_0160 hypothetical protein 24 13 Op 2 . + CDS 24062 - 26917 2732 ## cauri_0161 hypothetical protein 25 13 Op 3 . + CDS 26988 - 30653 4884 ## cauri_0162 hypothetical protein 26 13 Op 4 . + CDS 30653 - 33490 2756 ## cauri_0163 hypothetical protein 27 13 Op 5 . + CDS 33514 - 35934 2216 ## cauri_0164 hypothetical protein 28 13 Op 6 . + CDS 35937 - 37610 1266 ## cauri_0165 hypothetical protein 29 13 Op 7 . + CDS 37629 - 38588 1069 ## cauri_0166 hypothetical protein 30 13 Op 8 . + CDS 38588 - 39598 1123 ## cauri_0167 hypothetical protein 31 13 Op 9 . + CDS 39595 - 40089 356 ## cauri_0168 hypothetical protein + Term 40093 - 40135 13.1 32 14 Tu 1 . - CDS 40118 - 41458 1249 ## gi|262183255|ref|ZP_06042676.1| hypothetical protein CaurA7_04624 33 15 Op 1 . + CDS 41517 - 42458 855 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 34 15 Op 2 . + CDS 42470 - 42805 523 ## cauri_0170 hypothetical protein Predicted protein(s) >gi|227860882|gb|ACLH01000038.1| GENE 1 1 - 439 582 146 aa, chain - ## HITS:1 COG:Rv0924c KEGG:ns NR:ns ## COG: Rv0924c COG1914 # Protein_GI_number: 15608064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis H37Rv # 7 139 30 162 428 159 65.0 1e-39 MEMPMRKTLISLTGPAFVAAVAYVDPGNVAANISAGSHYGYLLVWVLVVANLMAMFIQYH SAKLGLVTHRSLPEIMGERLSRRARLGMWAQAELIAAATDLAEVIGGAIALQLLFNLPLF AGALIIGAVSIILLIFQKKNQWFEGL >gi|227860882|gb|ACLH01000038.1| GENE 2 602 - 3142 2619 846 aa, chain + ## HITS:1 COG:MTH1858 KEGG:ns NR:ns ## COG: MTH1858 COG1511 # Protein_GI_number: 15679846 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanothermobacter thermautotrophicus # 1 722 1 631 631 252 25.0 3e-66 MRQSWKIFIRDVARLGRVPRAWIILIGLVITPALYSWVNIAAFRDPYGHTNNIKVAVVNE DKGANNELTGKIDVGSEVIEKLKKNDQIGWQFLERDEAEKALLEGDVYASVTIPEDFSEN LVSMLDGKFTQPQLVYRVNEKNNAIAVKITDTGAKGLDKQITAAFKEQVATVAAENVKDT GTDFERKVTRAMNNTSSAFGETAQEIDGNRENLARIQGKLDAAADSTLGAKSTVADVSAA LGDAQTALAEVSSLVDQAQGGIGDFTDQTTGAFVSGASAVADGTAQAQESIADVTAGLNQ AGDRFDYATQRANTAIDASAESIAQLKALRDSATLSPQVAKEIDDAIQRLDEGNESNRQL VGNLNALSKDTQAAADNVQASAEAINQAAADTKATSQTLRDTVTTAVPEINRAMSNLSSM ASALSSTLEAQKGTMQEADGLLDGVAQQLRATKDTLSDFDANLLALQDSLRAMQGDVGSL RAAMNSKVVQDVTGLDAEEIGKFFAEPIELKTETVYPVDSYGSAMAALFTNLSLWIGAFV LMVIFRVEVDKEGFDRVTVGQAYLGRFLLMALMVIVQAVTVTVGDLLIGVQTVNAPAFIL TGVLVGLAYLSIIYALSSSLGHLGRGVCVVFVIIQIPGASGLYPIELLPNFFHTIYPLLP FTYGIDAMRETIGGFYGNHYFKNMGVLAFMFILFFVFGLLLRKALAHFNAIFNRELRDTE LFDYENVQVVGSGYRIADVIQALDSRSGLKKDLDRRAHDWGYWLKLVAIAGVIGVVILIV VSGLLPDQKPLLLAIWTAWCFLIIIAAVTLDYLRISLKQSAELVTLDEDDIKHPARIGAD STEGDN >gi|227860882|gb|ACLH01000038.1| GENE 3 3142 - 5190 2233 682 aa, chain + ## HITS:1 COG:MTH1858 KEGG:ns NR:ns ## COG: MTH1858 COG1511 # Protein_GI_number: 15679846 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanothermobacter thermautotrophicus # 1 675 1 623 631 273 26.0 8e-73 MRGTLDLFVNDMRTACRNVMSTVMLVGLVVIPMLFTWFNVLASWDPFDNTSQLKVAVASK DTGYKSDLLPVPINVGDQVLNELRANEQLDWVVTTSDEAIEGTKSGEYYAAIVLPEDFST DMMNFYTDGSKPADLSFYTNEKKNALAPKITGQGAEGVSAQVAEAFTTTVGDVSFDLVTS LSDFLSQGDTKAVLDRMQARADGVQTQLDMAARTARSLAGLVDTAVPLMESAQRIADSAD LELPEIQSSSLNVSTDALQQSLDATSASYDVVRQRIDALYDDASASRADRVATLNTLAGQ VEGTITQYQNLHGHIEALPLPAGDKEKALSRIEEAIDAQRTLHARLTAAANAPEPTKPDL SSLDDAKKAVEGISTSGLRESLRALQDSLGQVSADLDTAKTPVTIDSSSLTDARDAVQKL ASGLQDKANKFGDLRKDIDSAAASGDLKKLADLIGSDPDALAHAIAAPVDVDRQAVYPVK SFGAGMTPMYTALALWVGALLTAVSVRTDVVDKDKYSPMQRFFGRFGMFAAVGLMQSTML ILGLIFFVGIEPAHPILMLLAGWVSSLIFMLICYTFVVSFANAGKALAVLMLVIQVSSSG GAYPLQVLPDWFQNISPWLPATYTIRALRAAIAGTYHGDFWLSLFALLLFAVPMLILGVV FHKPLEKFTNGWVETLDKTKLM >gi|227860882|gb|ACLH01000038.1| GENE 4 5311 - 6675 1032 454 aa, chain + ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 9 454 16 445 445 244 37.0 2e-64 MKRGHFLGPARLTAVGFVLLILVGTVLLMLPISANVPQWTPFLPALFTATSAVSLTGLVV EDTGTYWTPFGQVVIITLIQLGGLGIMSLASLSGMLLTGRISFKARRTIAAEGRAVAFGG IRRALVLTLVMTLICEAIVAVFIGVRLATEHGVAPGRAAWEGAFHAISAFNNAGFSTYSD SVISFAADGWILLPLAFALIIGGLGYPMLAEFVRRARARLTRWRGGTPRIHRMSMTARMT LGATAFLLLGGTVVFFLSEGSGVLHGMPLGQKLINAFFMSASPRTAGFNAIDYGEAHPLT LMVTDILMFIGGGSAGTAGGIKVTTACVLGAAMISEFLGREDTSIGHRRLPLSTFRQALA LTAAGMIVVAVGVATLRIWDPEFTADQVTFEVMSAFATVGLSTGITASLSAPSQLMLCLI MYVGRVGPTTFVAALAARTVSLRYRYPEERPFIG >gi|227860882|gb|ACLH01000038.1| GENE 5 6668 - 7360 724 230 aa, chain + ## HITS:1 COG:lin1022 KEGG:ns NR:ns ## COG: lin1022 COG0569 # Protein_GI_number: 16800091 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Listeria innocua # 22 167 7 153 219 135 46.0 9e-32 MANMFSALRREKTSINIPPVVVIGMGRFGSSLARELMEHGVEVLGIDAEEKHVREHAAYL TEAVTADTTDAEALRQLGVDEVERVVVAIGSDLEDSILTASNLVELGVGDIWAKADSDAH ARILRQLGVHHVIRPERDTGRRVAHLLGGRFEDFAEIATDYGVTAMTPPASISKGPLNLH QVWEEHNVQLISRCEGPGQWHPLIDGTELTHRDLIVVAGSPADLEAFSQS >gi|227860882|gb|ACLH01000038.1| GENE 6 7421 - 7783 357 120 aa, chain + ## HITS:1 COG:Cgl0103 KEGG:ns NR:ns ## COG: Cgl0103 COG2149 # Protein_GI_number: 19551353 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 3 94 4 96 122 91 51.0 3e-19 MTKARFPGSVYGTGEEPDPRFSMANERTFLAWIRTSLAFIAGGVALETFELPLNTTLTRV VSVIMLIVAIVLPAVAWFHWGASERAMRHARPLPASPALALIVGVVIIIGLMILVGELLA >gi|227860882|gb|ACLH01000038.1| GENE 7 7825 - 7962 103 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAELNGGQPQHNGHHYPDNQGGPWRNGTHDQQTYDEARKPRALPG >gi|227860882|gb|ACLH01000038.1| GENE 8 8317 - 9891 1640 524 aa, chain + ## HITS:1 COG:Cgl0226 KEGG:ns NR:ns ## COG: Cgl0226 COG0471 # Protein_GI_number: 19551476 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Corynebacterium glutamicum # 1 522 1 525 527 588 66.0 1e-167 MTTPQTHVSTAHTEGEDDRGVDRKDWRRMAIGLIVGLALAILVWFIFPSNAVDTVLESPG AKDDAEYTQGALRAVAAVTILMGVWWMTEAIPLAATALLPLVIFPLAGVGAIKEVGAPYA SATIFLFMGGFLIALALQRWNLHRRLALYVVKLIGTSPKRLILGFMVATGFLSMWVSNTA TAVVMLPIGTSVLALTAETVGGWDKQKKFATALMLGIAYSASIGSLGTLIGTPPNAFLNA YMADTWGVTLGFGRWMAVGVPLAAIFLLIAWFLLITIFQPEMKEIPGGRELIDEEIEALG PWTRPQIMTGIIFLLAAASWVTLPLVLKEFDNYDDAIVGIAAGILLFILPADNERRIRLL DWETANEMPWDVLLLFGGGLSLSAMFNQSGLSLWIGEMAKGLSVLPVVLIVAAVAALVLF LTEITSNTATAATFIPIMGGVAVGVGLTADGDVNVLLLTIPVALAATCAFMLPVATPPNA IAYGSGYVKIGEMIKGGLGLNIIGIFLITLTVYLLAVPIFGLAV >gi|227860882|gb|ACLH01000038.1| GENE 9 9934 - 11001 1040 355 aa, chain + ## HITS:1 COG:Cgl0672 KEGG:ns NR:ns ## COG: Cgl0672 COG0523 # Protein_GI_number: 19551922 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Corynebacterium glutamicum # 3 355 5 361 362 457 65.0 1e-128 MATPVTVLSGFLGSGKTTLLNHLLANREGRKLAVIVNDFSEVNIDAALVAGAGHLERGED RFVELSNGCICCTLREDLIESVGKLARSGRFDQIVIESTGISEPMPVAATFEWKFEDGAT LADVAPIDTMVSLVDASTFLSQLRRGRSLVSENIEATPDDDRTIADLLVDQVEFADLILV TKTDLVEAAETERVIATVRAMNPRARVVPVTNGVIDPALVLDAHLYDTVAAAAYHGYAEE LANPHTPETEEYGISSVVFRADRPFNRERLLKALRASTGLVRSKGYCWIDTDLRVAHAWQ QAGPNLQIMPASLWAANGVTPGTELVLIGIDFDHEATLQSFRDAVLSDAEVAALV >gi|227860882|gb|ACLH01000038.1| GENE 10 11413 - 11892 387 159 aa, chain + ## HITS:1 COG:no KEGG:cauri_0149 NR:ns ## KEGG: cauri_0149 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 159 22 180 180 298 100.0 7e-80 MIQAILSAILLFISSLFSGAGSSELPGSSGIAEAGSSQRNIITSTPAGLVTANAQQLEFV VNSEWKSAQQPDSFQVNFREQYLDFSCDNAGFHFESNEASEIDITWDLMSDNICFGPQSD GALIDFLQRPVTVKVDPDASATPERIYLVQDEKAIALSR >gi|227860882|gb|ACLH01000038.1| GENE 11 12009 - 12914 922 301 aa, chain + ## HITS:1 COG:no KEGG:cauri_0150 NR:ns ## KEGG: cauri_0150 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 301 1 301 301 457 100.0 1e-127 MSARARIVGLDIARSLAIIGMIILHMANLVWSAKVVLSGLPAAGFAIIAGTTMMILARDY SLRVFLKLVARGLIVMLIGVALLPVGGEIQVVLVVMGAAMALTAWVPPLATGWKVLLFAL ATAGATVLYAPYTLPQVYPLVAFLAYMVAGMLLYDVYLTRPTRTQIVTSAVAVVVTGIGL WQRFNPDIAGWLRFTGHTGVLGEILLSVAVTAVVLHLCLIIGRQLPRLTFPFAALGSMSL TIYILHILTARYWQAHVSLHNTMAALGFVLAFLLLSALWKKFCGKGPAERVVAWAIKEVA A >gi|227860882|gb|ACLH01000038.1| GENE 12 12914 - 14053 1071 379 aa, chain + ## HITS:1 COG:no KEGG:cauri_0151 NR:ns ## KEGG: cauri_0151 # Name: not_defined # Def: putative protease # Organism: C.aurimucosum # Pathway: not_defined # 1 379 1 379 379 610 100.0 1e-173 MVARKITAVVASSLVVGLGAAPAMALEFAQPAPHSEESVAVAALRMGKIGNFGDCTGTLV AEQWVLTARHCLESVNNEGSQARFGQGKETRVYDVDSWAVSPTIDAGLMHLTEPVKGIKP AKLADAVPTAGEKGHFYGWSSSSRMARKGQLPMAEMEVGELLSGGTPPASPDESGQKMTP VAPGEMATAPGDSGAMAPGDMAVPAPGGMVAPAPGSSDAPQVMKGGDMPEIAVGPDGAES IPAGELGGVGPMIAAAIMDVKSLNGEGMQGGDSGGPFFVNGRLVGVATAGTSNADPDLPS PTAAITSVVEVRDWIEDVTSGRDTDGVLNVENSPAPPATMQVSAPVALTAGVTGVVGLIV LAIASRLISRKSGAGRRTN >gi|227860882|gb|ACLH01000038.1| GENE 13 14065 - 14253 344 62 aa, chain + ## HITS:1 COG:no KEGG:cauri_0152 NR:ns ## KEGG: cauri_0152 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 62 1 62 62 112 100.0 5e-24 MKEKLVPCLIAGAILGVVLWLASGMLWLLPVGLVAGLAGYPLLGITRDESQARKRRDDTF RD >gi|227860882|gb|ACLH01000038.1| GENE 14 14691 - 15719 1121 342 aa, chain - ## HITS:1 COG:Cgl0227 KEGG:ns NR:ns ## COG: Cgl0227 COG0287 # Protein_GI_number: 19551477 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Corynebacterium glutamicum # 1 342 1 340 340 370 60.0 1e-102 MSSQDVQRPVCIIGLGLIGGSLLRDLAAARHSVYGYNHSTSGARTAIKQGYDVTDDLPAI LRRAEEDNALIVIAVPMDAVASVLDVIQEHAPSCGLTDVVSVKAEVRQLIVERNMESRYV GGHPMAGTSKSGWENSHTGLFNRAAWVITYDYAAECDARGERIPAEWENIFADVVRMTQM VHAEAVPVRVANHDAAVARISHLPHVLAETLAVVGDNGGILAQSLAAGSFKDGTRVAGTR PDLVRQMCETNSTALVQALDEALELLQDARDSLASEQPSIAALADAGFRARTRIEARSGA RKESVSPVKISSRPVLRLHPGAPNWVAQLRQTESLGGRIEIF >gi|227860882|gb|ACLH01000038.1| GENE 15 15759 - 16262 718 167 aa, chain + ## HITS:1 COG:no KEGG:cauri_0154 NR:ns ## KEGG: cauri_0154 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 167 1 167 167 256 100.0 3e-67 MSHDDLSFAITVTSAEGAWVIRPFKDDFTDVNTSIKAVRNLRSEGAAFALLCVEDDYFVV VRPVPGDVRMLLSDATYASEDDFAADFLDLRDIDIPDLDEDEWEDADPYGDGDFDIFADL GLDENQVGYIIDNDEDWPSDMLLRIAGELGFGDELEDFIDGLDSDDS >gi|227860882|gb|ACLH01000038.1| GENE 16 16252 - 16740 469 162 aa, chain + ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 13 154 14 155 159 171 60.0 7e-43 MTLKPAAGLVRAESRMRRALEVARTTPVGDIPVGAVLYDASGNELATGVNRREQLNDPTA HAEVEAIRQAVRVHGDGWRLEGCELVVTLEPCAMCAGAIQASRVSSVVFGAFEPKTGACG SLVEVLRAPGALHVPEVRSGVLEEECAELLTGFFGGLRGSSE >gi|227860882|gb|ACLH01000038.1| GENE 17 16833 - 17030 473 65 aa, chain + ## HITS:1 COG:no KEGG:cauri_0155 NR:ns ## KEGG: cauri_0155 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 65 50 114 114 84 100.0 1e-15 MGDFENKKDEFVGKAKEAAGNVSDNEKLENEGKADQVTSEAKQKASDAVEGVKDKANEVI GNLKD >gi|227860882|gb|ACLH01000038.1| GENE 18 17261 - 17428 169 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183241|ref|ZP_06042662.1| ## NR: gi|262183241|ref|ZP_06042662.1| hypothetical protein CaurA7_04554 [Corynebacterium aurimucosum ATCC 700975] # 1 55 1 55 55 93 100.0 4e-18 MSTFVIVAVAAILLIAIPAGMMSRRIHKRTEDHDPEARQAALDFQRDVDRGRAGF >gi|227860882|gb|ACLH01000038.1| GENE 19 17610 - 20042 2727 810 aa, chain + ## HITS:1 COG:Cgl0232 KEGG:ns NR:ns ## COG: Cgl0232 COG2409 # Protein_GI_number: 19551482 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Corynebacterium glutamicum # 1 796 1 800 801 904 61.0 0 MAKLLYHLGRWSYINRWKVIIAWIFIVAAAGGATLSLMKPMTTEYSISGTPAIDATRRAV ELFPENGNPANAPSVNLVFKAPEGQKLSDPQNKEAVEDVVHHIAEGLDIPEGSQQRWGNP LEVSPALQQQVIEQFTSMGLPEETARADADNLAMVNADETIAYTTFDFDAESPYSVDPAD KDVVHEAMDIGRAAGLEVEAGGAGFGDEIQVNSISEVIGLAVAFIVLIITFGSLASAGMP LISAVVGVGLGAMGVMIATHWMELNNLTPVLAVMIGLAVGIDYALFIMSRYRQERSRMDG PDAAGMAVGTAGSSVVFAGATVFIALFALLVARISFLTAMGLAAAGTVFMAVLVALTLVP AMLGLLGDKAFAGRIPGVAGNPTKRRPRRTKPTMGNRWVRTVQRVPGVVMALVVLGLGAL TAPVLHMELALPADTTSNPDTTQRKAADLLSEGFGPGINGPFLVIVDGANANPDSAALQP YIQGQEGEEDEQKKAALSSFMYSVQRLNQVGGVKHAQLVGVSQDMKAAQIMVSPTTAPTD EATVGTASALRTASAELEDATGAEIGMTGLTAVQLDITERLEGAMGPYLAIVVGLAIFLL LAVFRSILVPLVAGLGFLLSVGGAFGLTVLVWQDGLTGLVPAPGPLISFMPIFLIGVTFG LAMDYQVFLVTRMREHFSRYPQGSGGKYSKYNANDEATIAGFTAGARVVTAAAIIMISVF VAFISQPLPFIQIFGFALAAGVLFDAFLVRMSLVPATMFLMGHTTWWMPKWLDKLIPQLD IEGTALEEEWERKHAAASREAEDKAAQPVE >gi|227860882|gb|ACLH01000038.1| GENE 20 20049 - 21332 1557 427 aa, chain + ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 10 426 2 414 418 664 82.0 0 MTHPKPQLETDLSFDVKKELDLSGPAQPGKHGRTGVIHTPHGDIQTPAFIPVATKATVKT LTPEQIRLTGAQAILSNAYHLYLQPGHDIVDEAGGVAAFENWHGPTYTDSGGFQVMSLGV GFKKVLAMDVADLTDSDIRAAKKERMAQVDEDGVDFKSIIDGSTHRFTPEVSMQIQHGLG ADIMFAFDELTTLVDTRTYQEESVERTRRWAQRCLDEHDRLTLARGPQKPRQSLWGVVQG AQYEDLRRQAARGLVELSDRAEANGRRGFGGFGIGGALEKENLGTIVGWVCDELPVDKPR HLLGISEPDDIFTAVEAGADTFDCVAPTRLARRGGVYTLDGRMNLTNARFKRDFAGVDEE FGGYVSENYSRAYLHHLLKAKEFLAGTLCTIHNLEFMIRLVDNIRESIDGGYYEAYRDEF LGRYYAK >gi|227860882|gb|ACLH01000038.1| GENE 21 21320 - 22045 545 241 aa, chain - ## HITS:1 COG:no KEGG:cauri_0158 NR:ns ## KEGG: cauri_0158 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 241 1 241 241 423 100.0 1e-117 MHKHLRASFLPILGLATALSLVACSGTEEDPSPETTNHAAPETTAVSSEASPSAAPTPPP LNEGPAPALTGTFEMDGPATITGATYDSMPFVVPLNPAGPQETMVRWVQDWGESPATAEQ GTTYVLGHAWGQQKLVFNPFSEVVTANVDLSNPTAVEGLDGAQVQRFTTPTLNGSHIRMT SEGGAGREWIVDNAFLVDKEQLGSDADLMNTEVPGRIVLIACAVDGTSDLEYNVIVTGHL A >gi|227860882|gb|ACLH01000038.1| GENE 22 22226 - 22960 847 244 aa, chain - ## HITS:1 COG:Cgl0234 KEGG:ns NR:ns ## COG: Cgl0234 COG1738 # Protein_GI_number: 19551484 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 233 20 249 250 289 65.0 3e-78 MTTQSATATTTNGGESIRFIPVHSTLYPWLVAVFVVTFLISNINATKGVQLGPLITDGAF FLFPIAYIVGDVLSECYGFKSTRRAVYIGFAMALLAAVSFYIAIWLPAADFYEGQEAFAA TLGLVPQILLASLVGYVVGQLLNSFTLVKMKARSGEKGLIARLVASTVVGEFGDTLLFCA IAAPVIGIDSFSGFLNYVIVGFLWKTACEVIMLPLTTLVISWVKRREDYVPIDEADAPTA APSK >gi|227860882|gb|ACLH01000038.1| GENE 23 23379 - 24062 566 227 aa, chain + ## HITS:1 COG:no KEGG:cauri_0160 NR:ns ## KEGG: cauri_0160 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 227 1 227 227 306 100.0 3e-82 MTFGSPGSSPQFGGRPPQGADQPGAGSGFGAPGGAGGPGGFGAPNPAQNPAQTPAQKPSS GTDFGRGSGFGSAPGSPAGANPSSGAGGSFGAPGSSDGFGESSPAPDYRRQVAAPTSPTK GPWPLLIAAGVSAVIALILLVIAPLIASPTQTLFFVLAIGGWLLAGIVSFILLGLYTLKN TQRQAETFYVEDTTQTLLYRIIMGGSFVLVIVAAVEIAFYVGKAVGA >gi|227860882|gb|ACLH01000038.1| GENE 24 24062 - 26917 2732 951 aa, chain + ## HITS:1 COG:no KEGG:cauri_0161 NR:ns ## KEGG: cauri_0161 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 951 1 951 951 1585 100.0 0 MKKFTRVLALSAAMAITGFGGSLGAVAQDAPPPPEERPEGIGSESALSEVSQKNLSDFGS CIASEKSADLLFVLDQSASLVGYEGSQPTDADAFRVDATADIVKQLAHLGEDNGADINVK LAGFGSDYYSDPAEYGGWTNVSGNADALQGELDKFRKEDRVADLETNYGAAYKGALKELA SHQGSSCRGIVFFTDGKYYTDAEANDLQGAQDKLCEVNSSVTAFRNSNIRLFNVGLVPAA EAQDQVRQLTRMAEGEDCGQGAPNGAFFDAGEDPAALFAAFRNLIPTSGGVTKEGNFKDQ FDFVLDNSVSPVRLSAVPKNSVGEGDLIPTLTGPDGETVELTPDTTSVAGAKVSVTENNK LPGMVDIAMEKDGDSWAGAWTFGYKAAEGTDGEYLASVVMVPGLNLDLKTEDGAKVEGGI NSDQILKGQLVDGKGEPRALEGEGTLYAEFVPEDGTPVTLVENAPITDGQQVDIPLDKVE NAASGQLRTRVEITTKETGERPGSKLDPINAETPLTVTPVNMPTVGSAQTITMTEKEITV DVPVTGPGKVWVVDQTMDSDGGMLPAGVPSVAVSSQHNSEDSALELSKDEKATIPVTLSV EEMADGPLRVEPVINLQSAEDNQQMELPLTLQGSMTAPLSKSAFGLSFVLAVLLALLIPL AILYFMKWFSGRIPEKPRMFTKTIPVRREGANLVRTDTGRPFAVSKDEFQGAVPVEASAR SARLGSNDAKVKMGLSPFTAAHVEVQRDGTISGKGKKSGYRAVLPLAVQNTWFFIGNKKD RDSGEIVMTIDTLAQASAYDEMSKEISRQALQLFDQVEFPAEKAEKAQTPPQAGQPGQPV QQNQPGSQPPSGPPPQRGPQQGAPHPGGRQQAPQPGGFGQSQPSGPSPQNQPGHAEEPGR PGFGGAPHFGGGSGFGGGPSFGQPGQQRPDNPGNPGNNGGWPPAPGFGSQG >gi|227860882|gb|ACLH01000038.1| GENE 25 26988 - 30653 4884 1221 aa, chain + ## HITS:1 COG:no KEGG:cauri_0162 NR:ns ## KEGG: cauri_0162 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 1221 1 1221 1221 2445 100.0 0 MKKFLVVGCGGSGAKTLAFMMDQLKAELRSIDPDMTELPKAWQFVNIDVPLEEEAGPQKL PNVTQNGGHYVGIGARQNYNTFDEGVSSILGRAGKLGEIATWATRNPSTNDVKLADGAGQ YRAIGRMLTLPNLKKIRQSLKEAVDEMFTQEAIQELNRLNYKQTKLDTDTGDSQPVVLVV SSMAGGAGASMFLDVCRVLTTIPNVNPQGTLIFMYTPEIFADNKADDMAGAWPNSLAMFG EVVAAQMGNAYDHDRAIFEAFDMGTPPEGQTFGRIFPIGSKMGTTSARFGDGSAMSIYRG LGRALAGLMASTKASDNLVSYALTNTPAGDGGRRFFGWDRPDGTPWGRLPWGSLGYAQVS MGRDRFAEYSSQRLARSAFERLFNGHLDPQNPEAGEMQIAKKLEERLPSAFSSMTLDPSW AQGGQIDSGSVWNWLNSVFGGQAQQAADSAAKHLQNFIPVGQGRNVNEWREEFEGNMADP RNEQAIASVLNNAAYDIVYRYANFFSDGVLATVESELAAVGVPYVREMLSKITDVLTNSD LLLPCLFEYSGYYQNTRVLAKPEGADPILSPLTGKGQMTDPTPTVNALMGLYFNQFYSYA LMAIAHLLKDVLQDYADENLFHLKRELGDAHAVLEKAVSKRPETNKLADVRTDEVNSWPT ELDEVVETRFKGAENEIMLTDVNTFISDYRDQMLRTIQGQQSTSDVTNYEQAYPFAVRAV IRGEWESLDAAQAPNDTLAPQKRTNDAYSNRAGWVSKYLSRHPQSGESRESQRAHYHAKI RPTDLLERSRQWINRRDYEFQKFNSVDLRRYLTLTPDINEVEHAERQRRFIEAFQLALSY ARPLAAVNDDMVQRIHGKSVQYTYSFSDIPFAELGSAETGIASQLESVLSRPEIDGPSTV ALRNSLNMSDHVQHIEIFGSYPNYSPIVFSSMFNYIAKDIEKQDNFDGSWWSERRTRPLP AALPLTKTERQAMVAGWIIGRITGRVYISNADAANAAAHIFDDTDGGVNGWVDFPDPLLI SPRRMIKKSDWMSSVLESIFIAYAKVQETGRYGFASSLYPYQLLRGLFDDGLDFAHSGAS THPVVHRLAQFLASGEAPNRGVMGTSIQDRYESFVEELDKFTRGADHFVPGHTNSLPGQG RKEKPFAEVRSREVASHTPYYRDLALDVIEVVPVIRNYLNQAKTVAENPVAQPAPQVRSS DSGFGQDVAPEFNLNDLDDTF >gi|227860882|gb|ACLH01000038.1| GENE 26 30653 - 33490 2756 945 aa, chain + ## HITS:1 COG:no KEGG:cauri_0163 NR:ns ## KEGG: cauri_0163 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 945 1 945 945 1839 100.0 0 MTNVIFFGHGATADDIRSRLSDLRAVGLLQDFLWIDYAHPINGAVVRSFTEEGTARLSTL DDALRSFSGDVLLATIDPMDAAQPQDVAKLTEWVGAVDQRLIQASNLRVRLLLSALPRES VDIAPLQGWSNLVLSPEEGGTPASSRIRPIKRTANGFELAQFAAPAVASIFGLWRGMPEP AVLDPDTHRVIETGDRQRFRLVRAFHRTIDAGDIEDKVRKAVFDPGQRLPQPQVNNISRA VHYANPEQLTDQCAQMFINQEISPLVSAPTAYEELQSHKVSGWAALKDNLRLYWSTVVGK PQDWVEGQRGAMNKNAATFLQKMLYGADSSVEVVLAGHSGKGSGATSVDELRQASEHTMR VAREQQFSLGQEPQLSRTWEAYHDYALGLVDGSWRDSIDTKGLRNNQGNMYIVQYGGQSV QDVSASFEGFHPLMTSTLGYTHESQATVAPFDPVGAERFAADIEYTSQQTRNEAVSRKKH EFASWRAKNSTTFAWKVGQGLWEKLGHAQQKYRDAHAKARELQELANSFQARDFNAENKA LTRKLRTMWIVFFVVLALMTYMVAGRYNPDLPLGEYLQWFDWPWYVVGIILAVLLFLVCS WAVFTKAQREIFDYVQRRKLLNRNQEIAAQNLATASAEISRISNAYNQFLSWSALLGRAI YAPFGRKETSSDHLRTPQSGLPENARIAQAVLNRDDAVRMTDEIRSHIFQTEWAHRSLKS LLDDMNDTFERNRTGHSAVALNEMWGMAGLGSSTALDNLSRSLDHPYMQDRDLKQQEWQK VITDPRMARSLQQYLSRVTFREEGGSRVQSTAEFLDGMNQEKGALQAFSPNALTNAGGAE GYTEIDGSRTRIVEVDSQTALTSQLSRSVTVVQYGRITDFKYLIPDAASGAPSFKDSSDF SLDDLDDMDHMGFKSPGQSNSESPTAQPPFGRPEALDLSDLDETF >gi|227860882|gb|ACLH01000038.1| GENE 27 33514 - 35934 2216 806 aa, chain + ## HITS:1 COG:no KEGG:cauri_0164 NR:ns ## KEGG: cauri_0164 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 806 1 806 806 1392 100.0 0 MTHNQKPSIADVPLSELKSLHQLKRVNADDVRAAVSAPFRQFAEQIAAAYNGEAVEHPEL SAQARNAAVDQERAAQERAAQERAAQERAVQERAAQERAERERAAQAEAQARQREQAQRA AAAAGVAQTGSAAQPQPAQAAAQPHDFFAEWEALQAEEEQKTQVNEEDYITIPGFGIKAE YQFRQDPNWEAPGIEFEVEVPQEAALEQESQEEPGYGIEPEPEPEDSDQRHPVRLWWPEL EHAPDEVVFYRVVADDAEMVASPDAGDTLVYTKGTAYREHEPGETGLRHYAVWAYKGRDL RELVNSQPVFMGDTGVVFPPVNVQVSTIKGAIQVSWDLLPGHSSAMVYACRDSEKEKLSP RFEQDVDSSGRKATIPVQETGQTVVISLLGQAEFHGATEQSQDEVAVQRSVKLASELEKL ELSRCERRSEYGQDTIEVDWYSPKTGEVKIYLTPTAPQADLRTSAVPKTYVESALSSAIS ETRGVSEPGSFQTTTVPWPPDWYEVYITPVNFNDADAWVGESKVLQRVQSIEDDQFRLIE RVDSQLITFDWPKGATAVEYSTNREHDQIREEDYDLQGGIRLHLDQHGDTVRLKPYAVFA GKRTEGNERVIQYEGLRPVTYDFEVDSSQGQARVFLWSLGNGDKRQFSCQVVYRADRLPL FPEDGEALGIVETNLQSTTHVAHGLGPMRGQHPDFTVALGERIQRGGFIRLFAVEGFDSQ VDTSFDSFGGDDAFSGFSESYSDASSTLSASDKAVVVEGDVSYRLGLYPPVQNQAPNYEA QYEQQNYDQQNYGQDYSQDQYFQGGQ >gi|227860882|gb|ACLH01000038.1| GENE 28 35937 - 37610 1266 557 aa, chain + ## HITS:1 COG:no KEGG:cauri_0165 NR:ns ## KEGG: cauri_0165 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 557 1 557 557 1007 100.0 0 MGGAFSYASFSRANGRAGGWGVGQKAGDITQEELAELVSFVPTSLNNGTTIPDFPSAQQR AELVRRTAVFALTPEAEKWVTMVSVPAGLDATGRGGNVFTYTSISRTGTPPAPATVLFSP DIPAPFSIYEVDKVQIPEKISARGPLHSDVLLEEFLDGEFRYPEKLPAPFKAVAPNPNPS FNRALVSAMATVLNSRNGLVILVAPDNQAALWIAATAREVGEDGFGFSTFEKAAAINEFP LSTSTMLVVPPSEKQRLAETAIPGNPVVFALDEALPDVSSYAENAAEEAESAAPEPQQEQ AEQRTVTTPIAEENAATGSEPAQRDAQSFDDSWGQDSADFGAPIADSSPFALPGHGPAGT PPNPLDAPEPNTAQENPFATKAEAAPATASGGNANVPGLSAEEWHRLKEFDPRWWIEHLD THRGRSIQLAYLDKNSLGEGLDKLLMSAIVASWVFYFPRDFNLLAEDALQPWEDRELEHI GYLTATHFAGIIALDHCERYATGRVAMLLDGTTQLLAERSAPMQQRPGPSYFEPNTAWQH RGAALGEHGRNMGFHGR >gi|227860882|gb|ACLH01000038.1| GENE 29 37629 - 38588 1069 319 aa, chain + ## HITS:1 COG:no KEGG:cauri_0166 NR:ns ## KEGG: cauri_0166 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 319 1 319 319 558 100.0 1e-157 MAKYTLRDGESRRIGSDGILRVEAFEMGTGGASMELAILGEGVDAVRVHDLSIMVHSLPE RATIVVRPKRNGTFGLRSEVRLTVSNSSDSVTFPRVLIDAAEDSAERLAEVTPESGSYHL EAFGTTEGAGITDSAREVRSKMRRAELDVAGLDNVTVVVDGSASMQINVTPKIVEATAKY IDALSDAFRHFRATDGQDSIETHKVDELTRFIADVIDSGAERVGQRPWRLPTLTSTSSLV IYVTDSPVTSMLETQVPTVVLITSAIGRQELELARINGTPAHVAYAVIDGDVVKQLESGA NTELSELTDRVTAMLKERN >gi|227860882|gb|ACLH01000038.1| GENE 30 38588 - 39598 1123 336 aa, chain + ## HITS:1 COG:no KEGG:cauri_0167 NR:ns ## KEGG: cauri_0167 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 336 1 336 336 685 100.0 0 MSQARCPWTFKPLEDGVTVSPYTNRELPQGWTDAVTHCVAMAGARNSGKSLYTAVMIKQL KQLAHKHNRSVQAADESTRERYAEVYEKPLFEEMRAMDPTPSAVATDAYQRDPLIFELGK WPDEQGHERMNYLVFRDVAGEDLENPPENEADRENLAFFSHADLVIFLFDPLRVQQIQDF IHGLIPNIGELGADSLRVLDNLLALLDTDTPPPLAVTISKFDTVQKLEQVDDVRWKKLMA NRGSAFRRDTGWNFRDSDRWMVHLEAESLLRFLGANDLINKIYSAAPRGGSFFVVSALGE APTGRQLARSGIAPYRVLDPIRWLLSQRGVFAQDVS >gi|227860882|gb|ACLH01000038.1| GENE 31 39595 - 40089 356 164 aa, chain + ## HITS:1 COG:no KEGG:cauri_0168 NR:ns ## KEGG: cauri_0168 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 164 1 164 164 219 100.0 2e-56 MTFGSPQPPGTPPTGSPAAPAPDYRYGAVTDSVRQTRRAADMKAQWAPWPLKIAAVLEVF ITSYAVYNICRLIAFENSPAAVSRTDQLSTELGVLLAVLVLLVCALTTYVLHAQQSARIA LTVISAIVVLLIPASSVMPASIASAVVIVLLWLPANRQWFGGQA >gi|227860882|gb|ACLH01000038.1| GENE 32 40118 - 41458 1249 446 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183255|ref|ZP_06042676.1| ## NR: gi|262183255|ref|ZP_06042676.1| hypothetical protein CaurA7_04624 [Corynebacterium aurimucosum ATCC 700975] # 1 446 1 446 446 681 100.0 0 MASDATYPLLDSADAEKMLAFARAQAPGVSLPTDESAHIDEQINRVLADDRFLGSVEDAV PAAQYLEARETLRVAAGTIENIDDSLTIASLGALTGQPALVATGYTRVARAWLDNNNTEA AEKFAAKAAAAGDDTALNEIAAARTAASQKDFSESAPTSAEVSSGSASNTSSTDSNVSLA VLQERLESAKSGEASAVKGHAAEFVAINDAVTGGDFDGAGATMGDILRTILESAVGALWA SNSAADCERVATQSFTILSNARTDEEYQQLPAVMLARFYSDAAQHSSSDLEQRVACFAAA AREFQRCGDLDGELHALLKTVALDVRHSDPEEAYDILASRYVDSLKLQSLPVSAKWTVLY SESLRLQAQDMFKSTQVLLDFLDRHSVAEATTPSEQNAMAEVAELLGDRYSSADATDRAR KMYHLAFNLFAKANNVRALEELRKKA >gi|227860882|gb|ACLH01000038.1| GENE 33 41517 - 42458 855 313 aa, chain + ## HITS:1 COG:Cgl0237 KEGG:ns NR:ns ## COG: Cgl0237 COG0008 # Protein_GI_number: 19551487 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 7 309 2 293 293 389 67.0 1e-108 MDFLSPAGRYAPSPSGDLHLGNLRTALLAWLYARSSGRRFLVRVEDIDTQRSSRESAQRQ LEDLAALGLDWDGEVIYQQDRYAAYEAALAQLPTFECYCSRKDIQEASRAPHAIPGQYPG TCRDLSDAERKAKRAELAAQNRVPAIRLRADVSSFTIHDAFAGEYTGEVDDFILRRGGQP PADPSQGMDWAYNLAVVVDDAFQGVDQIVRGDDLLSSAPRQAYLAHKLGYPEPEFVHVPL VLNSNNVRLSKRDGAVTLRQLLADPGRELSDVIRLLSRSLGYDAEGINTAADLLERFIPD KLSREPFVWDGTV >gi|227860882|gb|ACLH01000038.1| GENE 34 42470 - 42805 523 111 aa, chain + ## HITS:1 COG:no KEGG:cauri_0170 NR:ns ## KEGG: cauri_0170 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 111 1 111 111 197 100.0 1e-49 MEAFEYAHLEDGLDYLYDFFEEDLEERVRAGRELLPAGMEDILGDSTLDDYVWLWIKEPG PNGFRQYLRDGGYGEAEVKEALLLARTEWGMNTPPHVEWLKEDGYEAPEFD Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:24:04 2011 Seq name: gi|227860881|gb|ACLH01000039.1| Corynebacterium aurimucosum ATCC 700975 contig00096, whole genome shotgun sequence Length of sequence - 689 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 689 100.0 # CP001601 [R:1486280..1487590] # 16S ribosomal RNA # Corynebacterium aurimucosum ATCC 700975 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium. Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:24:05 2011 Seq name: gi|227860880|gb|ACLH01000040.1| Corynebacterium aurimucosum ATCC 700975 contig00099, whole genome shotgun sequence Length of sequence - 589 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 588 229 ## COG4584 Transposase and inactivated derivatives Predicted protein(s) >gi|227860880|gb|ACLH01000040.1| GENE 1 3 - 588 229 195 aa, chain - ## HITS:1 COG:AGl6 KEGG:ns NR:ns ## COG: AGl6 COG4584 # Protein_GI_number: 15890093 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 185 260 433 530 113 36.0 3e-25 SNAISTADRNRKVNDTYQQFLEHYNTAALPTRARRPKDKANVEAAVKIVTHKVIHALEGH QCVDLDELNGKIVDLVDAINRSVPFRSQHISRRDLFEEHEQHLLADLPTTPWQHTEWKRA KVAPDFHITVATVRYSVPHQLVGRTVDVRITGQVLTVFDQGTTVATHQVSHKRGAYVTDY EHIPSGMDSTRGLWT Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:24:09 2011 Seq name: gi|227860879|gb|ACLH01000041.1| Corynebacterium aurimucosum ATCC 700975 contig00103, whole genome shotgun sequence Length of sequence - 5519 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 229 205 ## - Prom 275 - 334 80.3 - 5S_RRNA 25 - 146 100.0 # CP001601 [D:820535..820656] # 5S RNA # Corynebacterium aurimucosum ATCC 700975 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium. - LSU_RRNA 238 - 3334 99.0 # CP001601 [D:817347..820443] # 23S ribosomal RNA # Corynebacterium aurimucosum ATCC 700975 # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium. - SSU_RRNA 3832 - 5307 99.0 # AB269764 [D:1..1479] # 16S ribosomal RNA # Corynebacterium aurimucosum # Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium. Predicted protein(s) >gi|227860879|gb|ACLH01000041.1| GENE 1 1 - 229 205 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNNYHTVACVHYTVSDTTPANQICPVCLSVAYSSRETPGPIPNPEAKPANADGTATGRL WESKKPPTPNNNKQLN Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:24:24 2011 Seq name: gi|227860878|gb|ACLH01000042.1| Corynebacterium aurimucosum ATCC 700975 contig00104, whole genome shotgun sequence Length of sequence - 25084 bp Number of predicted genes - 29, with homology - 28 Number of transcription units - 18, operones - 7 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 176 - 235 1.9 1 1 Tu 1 . + CDS 462 - 1106 409 ## cauri_2426 hypothetical protein 2 2 Tu 1 . - CDS 1141 - 2130 202 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family - Prom 2282 - 2341 2.7 3 3 Op 1 . + CDS 2129 - 2269 184 ## gi|262183263|ref|ZP_06042684.1| hypothetical protein CaurA7_04672 4 3 Op 2 . + CDS 2316 - 3212 1063 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 3235 - 3288 1.5 + Prom 3268 - 3327 2.0 5 4 Op 1 . + CDS 3352 - 3612 373 ## cauri_2423 hypothetical protein + Term 3628 - 3670 9.6 6 4 Op 2 . + CDS 3681 - 4289 658 ## COG1309 Transcriptional regulator + Term 4321 - 4356 -0.9 - Term 4122 - 4156 2.5 7 5 Tu 1 . - CDS 4246 - 5232 828 ## COG0706 Preprotein translocase subunit YidC 8 6 Op 1 . + CDS 5298 - 6056 694 ## COG3764 Sortase (surface protein transpeptidase) 9 6 Op 2 . + CDS 6056 - 6208 134 ## cauri_2419 hypothetical protein + Term 6219 - 6256 0.6 10 7 Tu 1 . - CDS 6229 - 6783 450 ## cauri_2418 putative secreted protein 11 8 Op 1 19/0.000 + CDS 6782 - 7954 1026 ## COG4585 Signal transduction histidine kinase 12 8 Op 2 . + CDS 7991 - 8629 765 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 8721 - 8764 4.3 13 9 Tu 1 . - CDS 8626 - 8943 360 ## cauri_2415 hypothetical protein 14 10 Tu 1 . - CDS 9049 - 9681 1012 ## cauri_2414 hypothetical protein - Prom 9701 - 9760 2.1 + Prom 9656 - 9715 4.2 15 11 Tu 1 . + CDS 9758 - 11194 1053 ## COG2251 Predicted nuclease (RecB family) + Term 11370 - 11408 -0.4 - Term 11226 - 11252 -0.6 16 12 Op 1 . - CDS 11323 - 12615 1256 ## cauri_2412 hypothetical protein 17 12 Op 2 . - CDS 12627 - 13748 1010 ## COG0477 Permeases of the major facilitator superfamily - Prom 13815 - 13874 2.1 + Prom 13763 - 13822 4.9 18 13 Tu 1 . + CDS 13849 - 14745 754 ## COG0583 Transcriptional regulator 19 14 Op 1 . - CDS 14742 - 15698 1056 ## COG0003 Oxyanion-translocating ATPase 20 14 Op 2 . - CDS 15707 - 15964 277 ## cauri_2408 hypothetical protein 21 14 Op 3 . - CDS 15954 - 17621 1977 ## COG1966 Carbon starvation protein, predicted membrane protein 22 14 Op 4 . - CDS 17696 - 17863 64 ## - Term 17879 - 17925 8.8 23 14 Op 5 . - CDS 17961 - 18563 440 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 18679 - 18738 3.0 24 15 Tu 1 . + CDS 18727 - 19377 737 ## COG0225 Peptide methionine sulfoxide reductase 25 16 Tu 1 . - CDS 19402 - 21234 1392 ## COG4425 Predicted membrane protein - Prom 21297 - 21356 1.7 + Prom 21254 - 21313 1.6 26 17 Op 1 . + CDS 21384 - 22331 1486 ## COG0039 Malate/lactate dehydrogenases 27 17 Op 2 . + CDS 22331 - 23035 562 ## COG0584 Glycerophosphoryl diester phosphodiesterase 28 17 Op 3 . + CDS 23057 - 23986 1394 ## cauri_2401 hypothetical protein + Term 24033 - 24078 13.9 - Term 24020 - 24066 14.1 29 18 Tu 1 . - CDS 24092 - 25084 1113 ## COG1316 Transcriptional regulator Predicted protein(s) >gi|227860878|gb|ACLH01000042.1| GENE 1 462 - 1106 409 214 aa, chain + ## HITS:1 COG:no KEGG:cauri_2426 NR:ns ## KEGG: cauri_2426 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 19 214 1 196 196 380 99.0 1e-104 MDRVPAACLIREGQVVSRVKDVGHSLVLSEKPAPGWEEDGLSHFFAGRTVDVSESGSRAA RVRLRDGLQRIDFLPFGNESVRKTQVGLATLLYRAGAWELSKKFALAALSFVLLMFGPAI RDRLDPVIDPVAERVPDMHSRGELYGMVFEFLHIDHVIDVVASLFTPIGAVVAPVTGLAV AYAAGWKGARDADAWWEPAGRPLGNESEIPAFER >gi|227860878|gb|ACLH01000042.1| GENE 2 1141 - 2130 202 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 32 309 15 270 287 82 26 3e-15 MRQRISQKRRGATPLPIRDGLNPTHARVSDGPISAWDFIHNLITTQRHRHPEDNEAALQA RFDTNEVVRQDGSPLRPDSTLATNAVVYFYRMPAPETPVPYDIPILFEDEHLLVVDKPPF MATMPRARHITETATVRLRRKTGNNELSPAHRLDRLTSGILVFTKDRSVRGAYQTLFAER RVTKTYEAIAPLADVSPGTVWRSRMEKTPGELQGRIVEGEVNAITEVAAVEPIDKAPYES IHGSLPELAKYTLKPQTGKTHQLRLHMLQAGVPIIGDPIYPVIFPAEAEDMRIPMHLTAT HISFVDPLTARPREFFSQLPFETDHLLSP >gi|227860878|gb|ACLH01000042.1| GENE 3 2129 - 2269 184 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183263|ref|ZP_06042684.1| ## NR: gi|262183263|ref|ZP_06042684.1| hypothetical protein CaurA7_04672 [Corynebacterium aurimucosum ATCC 700975] # 1 46 1 46 46 71 100.0 2e-11 MDFNSILAPVIDFFSNGIGAVIRDIVVAAYNLLFPANADAATTPQV >gi|227860878|gb|ACLH01000042.1| GENE 4 2316 - 3212 1063 298 aa, chain + ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 1 295 1 295 301 429 82.0 1e-120 MAKEDIVVVAVDGSEASENAVRWAANTAVKRGIPLRIASSYTMPQFLYAEGMVPPKELFD DLQAETLQKIEEARAEAHKVAPDLKIGHTVAEGSPIDMLLEMSKDVTMIVMGSRGMGGLS GMVMGSVSASVVSHASCPVVVVREDNHVTESTKYGPVVIGVDGSEVSQKATDYAFKEADA RGAELIAVHTWMDMQVQASLAGLSAAQAEWAEVEKEQAELLTERLADFQEKYPDVQVKKV IARDRPVRALTEASEGAQLLVVGSHGRGGFKGMLLGSTSRALLQSAPCPMMVVRPDSE >gi|227860878|gb|ACLH01000042.1| GENE 5 3352 - 3612 373 86 aa, chain + ## HITS:1 COG:no KEGG:cauri_2423 NR:ns ## KEGG: cauri_2423 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 104 100.0 1e-21 MGLGLGFFGSIVVGIIAGWLAEKIMKRDQGLFTNLIVGVIGGLIGGGLLALFNKSVGDSW FLMIITATVGACILLWIVGAITGRKK >gi|227860878|gb|ACLH01000042.1| GENE 6 3681 - 4289 658 202 aa, chain + ## HITS:1 COG:Cgl2876 KEGG:ns NR:ns ## COG: Cgl2876 COG1309 # Protein_GI_number: 19554126 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 17 202 28 213 213 266 72.0 1e-71 MAEKKSRRNRPSPRSRLLESATRLFTTEGIRVIGIDRILREADVAKASLYSLFGSKDALV IAYVEALDEEYRADWQKRTEDATDPESKILAFFDKAIEEQPAMEFRGSHFLNAAGEYPRP ETDAERGIVAACVEHRTWIHSTITALLNTKNGYPSEEQASQILIFLDGGLAGARLTRDVA PLVTAKQLAIQLLSAPPADYSI >gi|227860878|gb|ACLH01000042.1| GENE 7 4246 - 5232 828 328 aa, chain - ## HITS:1 COG:Cgl2875 KEGG:ns NR:ns ## COG: Cgl2875 COG0706 # Protein_GI_number: 19554125 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Corynebacterium glutamicum # 1 277 1 302 422 177 35.0 2e-44 MISIFMYPVSGIMKLWHLLFSSFLDGSMAWILTIVFLVLTVRGIIAPLNWLSVKQGRIGA LIRPEMTKLEEQLNQADSVEEAVTILTQQRELNKRFQHNPAVGCFPIFLITPAFIGLYQV VLRVSGSTNEPVGMLTLDDVSSFRNSTVFGVPLTDFAREHHDLILPMLLAALVFTSLNTL ITLYRSYLTTRFDQKIPRRLLWFMALMVILIPWMLWSVAWNGPIPVTIIFYWGCTYLFTL LQTLVYEFILRRRYPLPEAVHELRRESIRRWRDKEEKKEKKAAKRRLKEDPKHKEEVAAA RKRHSAIVAEARKIIKSNNRPEAPTEAE >gi|227860878|gb|ACLH01000042.1| GENE 8 5298 - 6056 694 252 aa, chain + ## HITS:1 COG:Cgl2874 KEGG:ns NR:ns ## COG: Cgl2874 COG3764 # Protein_GI_number: 19554124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Corynebacterium glutamicum # 11 252 2 255 255 284 56.0 1e-76 MPHPTSRTRPTVGTVIGELMLTVGVLLLLFAFYESYWTNIKSGQMQDQANETLQEEWHNP RGGGHAPKLGEAFARLYIPAFGSDFAFAVLEGTNEDDLLRGPGRYTETQMPGESGNFAVA GHRVGKGAPFNDLGNLDTCDAIVIETETEWITYRVLPIDGVRGDCFSPEQQAKPEYQPVQ GRHITLPGDVSVLQPIPGAEGVEPSESLLTLTTCHPQFSNAERMIIHAMETDREAKAPGT DDNDRPAVLEEN >gi|227860878|gb|ACLH01000042.1| GENE 9 6056 - 6208 134 50 aa, chain + ## HITS:1 COG:no KEGG:cauri_2419 NR:ns ## KEGG: cauri_2419 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 50 1 50 50 70 100.0 3e-11 MYRALWNLLPGPTAVKAVLALALAVGVFFLLMEVIFPWVAAQMPYNDVAV >gi|227860878|gb|ACLH01000042.1| GENE 10 6229 - 6783 450 184 aa, chain - ## HITS:1 COG:no KEGG:cauri_2418 NR:ns ## KEGG: cauri_2418 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 65 184 1 120 120 234 99.0 9e-61 MRHSLLPSFAACVIGIGLATVGCSEAQDPTTSTHTTSPASEHNAGDGLPADATAEVSDWE DCPYLDTQWVADTNGQRMTRWGVDKRFSTPACVFWSYPEDPQATVLVRQMPSVEEARAVV DWAAPVEDTELTEFDGWSGGRGVFEDHTVYAVQKDNHAVVVWSNQLQTLKPQLIAQEAIK RLGL >gi|227860878|gb|ACLH01000042.1| GENE 11 6782 - 7954 1026 390 aa, chain + ## HITS:1 COG:Cgl2871 KEGG:ns NR:ns ## COG: Cgl2871 COG4585 # Protein_GI_number: 19554121 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 14 386 32 413 444 333 51.0 4e-91 MTSTLDQRSVESDALRNGIHVLTATLLVVAIFTTVRLPLWQGVLNLLLLVSFAVVYFGGS AYLEALPRVARYGWMVILTVLWLADLAVAPAAIYLVFSLYFVYLYVLEMIPGVICVIAAT VMTVLVQIPGGLSFGGIMGPAVSAMVTIAITYAFRALSSMNQELVKTRSQLVESERTAGM TAERQRIAHEIHDTLAQGLSSIQMLLHAADRDLDQEDIPKAQERIELARRTAADNLHEAR AMIAALQPAALSETSLGAAMTRMADNFAATGGVDVSVDVEGDTQQLPMKVEAALLRIAQG AMGNVVKHAHASKARVTVTYAPDEVRVDVVDNGQGFDVSAVENKPAGLGHIGLSAMRRRA EELGGEVVIESTPGSGTAVSVSVPLDNDVD >gi|227860878|gb|ACLH01000042.1| GENE 12 7991 - 8629 765 212 aa, chain + ## HITS:1 COG:Cgl2870 KEGG:ns NR:ns ## COG: Cgl2870 COG2197 # Protein_GI_number: 19554120 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 1 212 1 212 212 305 84.0 4e-83 MIRVLLADDHEIVRLGLRSVLEGAEDIEVVGEVATAEAAVSAAQAGGIDVLLMDLRFGAG IEGTRVMGGAEATAAIRYSMENPPKVLVVTNYDTDADILGAIEAGAVGYLLKDAPPVELL AAVRSAAEGDSALSPVVADKLMTRVRTPRTSLTPRELEVLKLVAAGSSNREIGVELMLSE ATVKSHLVHIYDKLGVRSRTSAVAAAREQGVL >gi|227860878|gb|ACLH01000042.1| GENE 13 8626 - 8943 360 105 aa, chain - ## HITS:1 COG:no KEGG:cauri_2415 NR:ns ## KEGG: cauri_2415 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 105 1 105 105 195 100.0 4e-49 MARREITQFFDDIDNKPLSEEELIVIRFSVDGKDYLLDVSQDNADKFHAALEPFVKAARH PVKKDTRRYKPADVRVWAAKHGYQVAERGKIPNDVILAYRNANNL >gi|227860878|gb|ACLH01000042.1| GENE 14 9049 - 9681 1012 210 aa, chain - ## HITS:1 COG:no KEGG:cauri_2414 NR:ns ## KEGG: cauri_2414 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 210 1 210 210 238 100.0 1e-61 MGIMKKIRKARREARAEIKAAKTRAKAEVKAADKAKHRQQKLLARQEKALIKSEEKGLKN RRKHEYKMAKKELERIKQGRFNKNNVKRYAGALRTAAPLLLPLLYRGITAAQREVEKKRA QKAGVSAEQLASFSGHGAPLKARTAGIRNSLKDAQLPAGFKRDVKERLNELDSAIDNAEY MTDQQRQRAHRSISGEIDSLNEEIQSKLRA >gi|227860878|gb|ACLH01000042.1| GENE 15 9758 - 11194 1053 478 aa, chain + ## HITS:1 COG:Cgl2866 KEGG:ns NR:ns ## COG: Cgl2866 COG2251 # Protein_GI_number: 19554116 # Func_class: R General function prediction only # Function: Predicted nuclease (RecB family) # Organism: Corynebacterium glutamicum # 35 470 3 462 471 395 50.0 1e-110 MKDVLVATDLVGCRYRLVQRRAHPEIPRTAVSQARAERHAAAIDAALSRLPKKGPGRFRR IDLEGDDFERALATLEALVRGYTHITNAVFSTSEWMVRVELLVRDGDKYSPVIVSDHRVA RPHEGSRTLVVPTHRLGLSEPLPAKYKIRHHAVDGYRLALAARGLEEVGLNSGRGAAIGQ DRSQAFVTDTSRFAIDEALAQPLPSGPRRVKECASCRFWPLCREELEARDDISLFLPGDR ANPYRERGITTVQGLIDASLGAPSALAAAWREDIPLLRRERVSVPRADVEVDVDMEAYLD QGAYLWGALLDGEYHSFVTWEPLGGRAEAENFAEFWEWLMGVRAEAHAAGKTFAAYCYSA HGENHWMRRSAQRFSTPNLQEVEEFISSEEWVDMFVHVRRSFAGTAGLGLKTVAPVAGFE WPEEFDGEESVNARRAALAGDTDARAQILRYNAGDVRATHAVREWMSDDAPGVLPLEP >gi|227860878|gb|ACLH01000042.1| GENE 16 11323 - 12615 1256 430 aa, chain - ## HITS:1 COG:no KEGG:cauri_2412 NR:ns ## KEGG: cauri_2412 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 430 1 430 430 754 100.0 0 MDKWSSRTWHRKASRPVSLWMMVFLLAGAIHTFIPNYRWVLIHLFTLGILSNSIVVWSQH LTEKFVQLKVPMSARPRQLARIYLLNTGVIFTLVGQLLTEFWDLHWVLTQIGATLVALAV SWHGMTLFMLWRRAESKRFRPVVAAYVASALFLAVGACLGAFLATHPSHPRLLIAHVAAN IGGFVGLAAAGSLTILFPSIWRTKGINPRMGLSFTLLGLGVIATLVGSIWNIPQVGLILY CLGWALSLQGWLVNVLTVLHDPRGRISFPALSVLFSSFWLLGGLIYFTTQHFFSSEPKIP MLALVVGFGAQLLIGVMGYMLPTTMGGGPSAVRAGLREYNRWGLGRSVFVNGGLALWLAT SSSLTMVAASLLCLGSLAVFPILTARAVKAQKAVLLKKAEGPAPTNTTDWDQAWVALAVL IILGGISLIV >gi|227860878|gb|ACLH01000042.1| GENE 17 12627 - 13748 1010 373 aa, chain - ## HITS:1 COG:Cgl2864 KEGG:ns NR:ns ## COG: Cgl2864 COG0477 # Protein_GI_number: 19554114 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 1 362 39 401 416 335 51.0 8e-92 MLFVGLAIFSCLYPTQAMLPTLVEDMGMSPTEAAMTISAATGALAICVIPVSIISERIGR GKLLLVSTIAATLIGMLVPLAPNPEILIATRALQGAVIAGAPATAMAWISEELESSYVAR AMGLYIAGTTIGGLTGRLIPTGLLELTSWRWALAGSSLVTLILAIIAAILLPYQQNFTPK EIHFRSELRAIFRHARDIRLIPLFIVAFVAMGTFVSLYNFLAFRLIDHFHLSPGLAGLVF LFYLTGTWSSARAGRLVSQVGHANTLLLSCLLFAVGIALCMGSLIPTLLGIVLFTIGFFA AHSTASGWVGHIATHDRAEASSLYVFFYYLGSSILGALAGVLFDSLSWTGFIAVYAALAA GIALLSWMVRKTG >gi|227860878|gb|ACLH01000042.1| GENE 18 13849 - 14745 754 298 aa, chain + ## HITS:1 COG:Cgl2863 KEGG:ns NR:ns ## COG: Cgl2863 COG0583 # Protein_GI_number: 19554113 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 284 8 298 308 283 52.0 3e-76 MNLEDVRGVVAVADHGLVGAAADSLGLSQSALTRRVQRIETAVGASLFERSGRRLRLNAR GRAFVDHARRMLLSEAAARDAVSRLMDPERGTVRLDFMHSLGTWMVPELLKAYRARHPHV DIRLHQGAARELVDRVAAGESDLALVGPRPISPGPLGWHQLKLQRLGLAVPEGHWAAGRN SVRMEDFRDEPFIGMLPGYGTRMLLDSLASEAGFSPRLVFESMELTTVAGLVAAGLGSAL LPLDDPYLKARNLIPIEPEAYRELGLVWREGDDAPPVEHFKDFVVARTAEGSSLVEAD >gi|227860878|gb|ACLH01000042.1| GENE 19 14742 - 15698 1056 318 aa, chain - ## HITS:1 COG:BH1795 KEGG:ns NR:ns ## COG: BH1795 COG0003 # Protein_GI_number: 15614358 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Bacillus halodurans # 2 314 11 308 313 195 35.0 9e-50 MFFGGKGGVGKTTLATATALRLAQEGKRVLLVSTDPAHNLGHIFGTTLGDVPTTIRPHLS VIEIDPARATEEHLEGVAKQMRRFMPERLHREVGRHVDLARHSPGTHEAAMLERIAQLVE EQQAGGEFEHIIFDTAPSGHTSRLMALPEIMAAYTDGLLARREKSDKFGAVVRGMTSAEK AVSASSQDPVDRRNQEIRSTLLKRRRRFERLRSELSDDATTSFFLVLTADRTPVLETAEF YAELSSHGVHCGGLLVNRRTPESTGGFLQQRRSSEDAALALLAEKLPGQPVHTLPWLPHE VSTPEALAALAAELPFGS >gi|227860878|gb|ACLH01000042.1| GENE 20 15707 - 15964 277 85 aa, chain - ## HITS:1 COG:no KEGG:cauri_2408 NR:ns ## KEGG: cauri_2408 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 85 12 96 96 169 100.0 3e-41 MLDKLKAFGRGLDEFYSAPYRRSFAKAQQEEDDLFMLLVLSEALGLPNPASYYTLELLPL MYEDFHAWHTRMGMERSPLNGISCC >gi|227860878|gb|ACLH01000042.1| GENE 21 15954 - 17621 1977 555 aa, chain - ## HITS:1 COG:BH1793 KEGG:ns NR:ns ## COG: BH1793 COG1966 # Protein_GI_number: 15614356 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Bacillus halodurans # 4 534 17 571 580 421 48.0 1e-117 MLAGYLLYSRFLASKVYQLSEGFSTPSHTMEDGVDYVPTNKYVLWGHHFTSVAGAAPIIG PAVAVIWGWLPAFLWVTLGTVFFAGMHDLGALWASQRHRGQSIGTLSGRYIGARGRALFL VVIFLLLLMVNAAFAVVISNLLISTPTAVIPTWGAILVALLIGQAIYRFRWNLTIVSIVG VAALYALMILGDRVPLALPETVLGIPDRGVWIILLFVYAFIASLLPVWVLLQPRDYINGL QLFVGLIILYGSFLVTRPEVVAPTVSDHVPDNTPGIFPLLFVTIACGAVSGFHGVVSSGT SSKQLDKETDARFVGYFGAVGEGLLALGTIVATTSGFKTAADWEAVYNEWNAGGVEAFVQ GGGALMNEGLGIPTSLSATILATMAVLFAATTMDSGVRLQRMVVSEAAELMGIKLSGLVA TIIAVGCALGLTFSTGVDGSGGMLIWPLFGTTNQLMAGLTLAIIVVILTQLRRPTWPVLL PLVFVTAMSLWAAVLQLKTLFQAGNWLLLVIDGVIIIAAIWVIAEAIAAISRARTAPQVV WNDEDIEPPLPVNAR >gi|227860878|gb|ACLH01000042.1| GENE 22 17696 - 17863 64 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGGDDLNPFCPTHPTLPYRVLEIKPTFTKRLWHNSHHLHMWMRITGLPFLLKSQR >gi|227860878|gb|ACLH01000042.1| GENE 23 17961 - 18563 440 200 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 6 198 5 200 201 174 49 7e-43 MAVYELPELDYAYDALEPHISAEIMELHHSKHHAGYVAGANAALEALEEQRNGEANADAI RALSKNLAFNLGGHTNHSIFWKNLSPNGGGEPTGELAEAINRDFGSFEKFKAHFSAIATG LQGSGWAVLGYDHVAGRLIIEQLTDQQGNISVNFTPLLMLDMWEHAFYLQYKNVKADYVK AVWNVFNWDDVAERYAAATK >gi|227860878|gb|ACLH01000042.1| GENE 24 18727 - 19377 737 216 aa, chain + ## HITS:1 COG:Cgl2861 KEGG:ns NR:ns ## COG: Cgl2861 COG0225 # Protein_GI_number: 19554111 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Corynebacterium glutamicum # 2 216 3 214 217 280 61.0 1e-75 MFLFTPEPKLVAAEDALPGRAEPVLDNPQPHAVLGTPITGPWKEGQKSLIIAIGCFWGAE KMFWETEGVESTSVGYAGGTTPNPTYYEVCRGLTNHAEAVQITYDPQRVSLRDLVVKALE AHDPTQGFRQGNDVGTQYRSAFYPETEEEREVIQQLVDSYAGKLADAGFGATTTEVTLLS ETDSGEYYLAEDEHQQYLHKVPNGYCPHHSTGVKCG >gi|227860878|gb|ACLH01000042.1| GENE 25 19402 - 21234 1392 610 aa, chain - ## HITS:1 COG:Cgl2849 KEGG:ns NR:ns ## COG: Cgl2849 COG4425 # Protein_GI_number: 19554099 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 20 598 29 592 592 465 43.0 1e-130 MRQLARRIALRTARTGLQAAIFSLELISDLTPGMRMTGRRRLPQNMWPGLFGAEVATWAA VSPSLLPRPWWVTAANVAIGQGAGHLAATTAAFAAKRALHHAGRRPQDRVGPTTRRFSYY LLGLGTFIAGIRSLRNQTEQARLVGKLNDRGPQSAALGMVAGTAGYGALLIVGEAAQLTV TQLSLQVQRWLPRWIAWPLAGGAVGFAAAVASDRMVWRRLLRKATIQGLALNKLVYPGSV MPWEPERSGSPWSHEQWTAVGSQGRVFLDRGPRAQDIKEVMHFDRAREPIRIYIGLIRGR GPHAAARHAVAEMDRTGAFHRDTIVLQMPSGSGWINNYSVSGYEFLTRGNCATVALQFDY LPSMFSYLVDKNLSRTFARELIAAVHARLELLPEDNRPKLYLSGESLGCYAIVENYETVE ELLAACDGAVFTGPPRMTSFMRRLHRERGSLERLPLVDGGRHLRFAAVPAHMEHDAFGEP YGPWERPRVAVGQHASDAIVWWDSKLIYARPNWIHEPTPQTLYADTFKNLRWHPFITFWQ VALDQINSLNVPGGHGHNYFEETFWYWDSVLGSQTRTQLTPELAERMRDFVERDQLNKPS DFRTHVRKQL >gi|227860878|gb|ACLH01000042.1| GENE 26 21384 - 22331 1486 315 aa, chain + ## HITS:1 COG:Cgl2848 KEGG:ns NR:ns ## COG: Cgl2848 COG0039 # Protein_GI_number: 19554098 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Corynebacterium glutamicum # 1 314 1 314 314 488 77.0 1e-138 MGNHVGNKVVLIGAGDVGVAYAYALVNQGTVDHLAIIDIDEKKLEGNVMDLNHGVVWAPS RTRVTKGTYEDCKDASMVVICAGAAQKPGETRLQLVDKNVKIMNSIVADVMKNDFDGIFL VASNPVDLLTYAVWKASGFPHERVIGSGTVLDSARYRYMLSEMDDVAPTSVHAYIIGEHG DSELPVVSSANIAGVSLSHRSEKDPGYNERIEKIFEDTRDAAYHIIDAKGSTSYGIGMAL ARITRAVIQNQAVALPVSAYLQGEYGHEDVFIGTPAIVDRSGVNRVIELALDEHEKERFE NSFNTLNTIKEEIFG >gi|227860878|gb|ACLH01000042.1| GENE 27 22331 - 23035 562 234 aa, chain + ## HITS:1 COG:Cgl2845 KEGG:ns NR:ns ## COG: Cgl2845 COG0584 # Protein_GI_number: 19554095 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Corynebacterium glutamicum # 1 228 1 232 253 236 53.0 4e-62 MKIVAHRGYSGKYPELSPLAFEKALELPIHGIECDIRLSSDGKVVVHHDPTLDRTTNGSG RVSRMTWEELRRLKIGGGQRMLLLDELLDMLGEKKHHLYIETKHPSGQGDILEEQMVLRL RYAGLLDDPRIHMISFSHRAIRRMAALAPHVDRIYLRRDWERHFNRPDILLSQPTGLGMS LLRGKLQPGAIGAHGLPTYMWTIDKPEDMKWAWANGVDILATNQPEVALHAIEL >gi|227860878|gb|ACLH01000042.1| GENE 28 23057 - 23986 1394 309 aa, chain + ## HITS:1 COG:no KEGG:cauri_2401 NR:ns ## KEGG: cauri_2401 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 309 1 309 309 529 100.0 1e-149 MAKKKKKNEQLPEGMSRRQAKLAARAAERAALEKDPRPFGGLAAEASLVALQEFVPSATA KLSVKGFDKDVYVATVLPGATAALIREEESGGEAFVGLQVQSHTHNPGRDLAFALNWVKN NAPGSTLESTAADGSQPELKELLEEDAELEINVYQDFAWWMPEGAQVPPQMAQALQRAND SVIESYQVGQEAEGFVGTAFWANAGGGKAHIRWVRPCDDENAFLNALARIAARGELNLGE NTKFAGVFRTHGLIAPVFDLDPEVAHDSYEVELSRVNKALEEEISNDANLDADERKQLQN IKSRQVTLR >gi|227860878|gb|ACLH01000042.1| GENE 29 24092 - 25084 1113 330 aa, chain - ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 43 330 1 288 288 384 65.0 1e-106 GPDAPPRSYSPQTPSRGRPTGRPHSRRKKVNPAKQAFGCLGWLVVIVLVSMVAFTLWTDS RLTRIDALPNEQVAQTSGTNWLLVGSDSRQGLTEEQQAELGTGGDVGVGRTDTIMLLHIP SSGKAQLVSIPRDSYVDVPGFGIDKVNAAFTYGGPQLLTQTVEQATGLHIDHYAEIGMGG LANVVDSVGGVEICVKEPINDPLAGIDLQAGCQKLRGPDALGYVRTRATAMGDLDRVERQ REFFAALLDKATSFSTIGNPFKAVSLVNHTADSFIVNEKDHVWHLARVALSMASGVETKT VPIGGFQDTVVGNVVLWDDAEAQALWDSMR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:25:11 2011 Seq name: gi|227860877|gb|ACLH01000043.1| Corynebacterium aurimucosum ATCC 700975 contig00105, whole genome shotgun sequence Length of sequence - 15087 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 6, operones - 5 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 411 213 ## cauri_2400 transcriptional regulator, LytR family 2 1 Op 2 . - CDS 504 - 1202 803 ## COG1266 Predicted metal-dependent membrane protease 3 1 Op 3 . - CDS 1199 - 2344 998 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 4 2 Op 1 5/0.000 + CDS 2386 - 3297 875 ## COG0077 Prephenate dehydratase 5 2 Op 2 . + CDS 3309 - 3956 654 ## COG0406 Fructose-2,6-bisphosphatase - Term 3768 - 3824 3.0 6 3 Op 1 . - CDS 4033 - 4380 508 ## COG3824 Uncharacterized protein conserved in bacteria 7 3 Op 2 . - CDS 4409 - 5524 1260 ## cauri_2394 putative secreted protein 8 3 Op 3 . - CDS 5598 - 6329 669 ## COG2188 Transcriptional regulators + Prom 6265 - 6324 2.4 9 4 Op 1 1/0.333 + CDS 6396 - 7658 1495 ## COG0172 Seryl-tRNA synthetase + Term 7665 - 7704 8.7 10 4 Op 2 . + CDS 7748 - 9493 1441 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 9535 - 9572 7.1 11 5 Op 1 4/0.000 + CDS 9824 - 11548 2235 ## COG0578 Glycerol-3-phosphate dehydrogenase 12 5 Op 2 18/0.000 + CDS 11623 - 12360 1012 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 13 5 Op 3 1/0.333 + CDS 12397 - 13944 2180 ## COG0554 Glycerol kinase + Term 13974 - 14018 13.1 14 6 Tu 1 . + CDS 14134 - 14979 714 ## COG0561 Predicted hydrolases of the HAD superfamily Predicted protein(s) >gi|227860877|gb|ACLH01000043.1| GENE 1 3 - 411 213 136 aa, chain - ## HITS:1 COG:no KEGG:cauri_2400 NR:ns ## KEGG: cauri_2400 # Name: lytR1 # Def: transcriptional regulator, LytR family # Organism: C.aurimucosum # Pathway: not_defined # 1 136 13 148 479 232 100.0 5e-60 MTYQGRDPEREARRAGEPHGDSRRAGFADSANPSRPYDPAGPRAAHAAGQDASEFVLGAD GQPLRDRYGRPVRRRPSTPRSTPSHNSARAQRPSPRRSRPEETRFDVDAYMAQHSPARPA PRQSAPTREPAAGAYR >gi|227860877|gb|ACLH01000043.1| GENE 2 504 - 1202 803 232 aa, chain - ## HITS:1 COG:Cgl2838 KEGG:ns NR:ns ## COG: Cgl2838 COG1266 # Protein_GI_number: 19554088 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Corynebacterium glutamicum # 21 231 1 212 219 228 59.0 6e-60 MTARSRLRAEILIVLTITFGISGVRAALRLTDSLLNPAPLNEQSVTINASQSATTLLDLA FQLCSAAVLFAWGALALYLISSPPRPQWRDGLHGAALAAVIGLPGLVLYYVALHVGWTKE IVPGAFDTGIEIPVLLIKSFANAWAEELVVVYWFMTRLKQSGWALPATLAASSILRGSYH LYQGVSAGFGNIIMGVLYGWYFHRTGKVWPLVIAHFLIDAVAFVGYALLFGA >gi|227860877|gb|ACLH01000043.1| GENE 3 1199 - 2344 998 381 aa, chain - ## HITS:1 COG:Cgl2837 KEGG:ns NR:ns ## COG: Cgl2837 COG0154 # Protein_GI_number: 19554087 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Corynebacterium glutamicum # 7 376 2 371 379 296 45.0 6e-80 MESTEFTLDKLREDLSGLSPAEHGFTYLDLECRPQSHGRLSGWILSVKDLNDVAGMPTTL GHAERAYVAEETDPLLQELIDAGALVVGKSAAPELGLRVDTEPVGLPHPDNPLYPGHTPG GSSGGAAVQVARGLLRAAHASDGGGSIRVPAAACGVVGFKPGGEDLSVQGFITRSIADTA TLHGFRPRARRARIGVLTDPLFAEVEVAPHMLRAVAEATATFEGAGFETVAISPYPQAAA TFEAFQHIFSRRLAGLDFAEGYAEWIRAKGRRVTDSEFAAARAHAAQLSEMLAQEWEVDA ILSPMLAFDPPRRGHFLALDHQANFDEQTRWSPWGSLFNVAQLPAISVPWPVRDHPPVGV HLGSLTLDDASLLGLAQVLHP >gi|227860877|gb|ACLH01000043.1| GENE 4 2386 - 3297 875 303 aa, chain + ## HITS:1 COG:Cgl2836 KEGG:ns NR:ns ## COG: Cgl2836 COG0077 # Protein_GI_number: 19554086 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Corynebacterium glutamicum # 3 303 6 312 315 310 59.0 3e-84 MSTTIAFLGPAGTFTEAAMQHFAADFAAPEGLPVSSPAEALSAVRSGAADYACVAIENSV DGPVTATFDALADGTRVQIYREVDLPVSFSILVRPGTSAQNLRTFSTHPVAYQQVCGWLE QNLPDVEYVPAASNGAAAQAVARGEVDVAAAPARAAEVFGLDSLAENVADVAGATTRFVL VGSAGKPTARTGNDRTSVIFTLPNEPGSLVGALQEFAHRGVDLSRIESRPLRTVFGNYRF HADLIGHIEDQPVAEALRALWLRAEDVVFVGSWPSVVALGEAPRDLARLHEADEWVAQAR TGQ >gi|227860877|gb|ACLH01000043.1| GENE 5 3309 - 3956 654 215 aa, chain + ## HITS:1 COG:Cgl2835 KEGG:ns NR:ns ## COG: Cgl2835 COG0406 # Protein_GI_number: 19554085 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 1 213 1 217 223 222 52.0 3e-58 MTGRIILLRHGQTFSNIDRVMDTRPPGAELTERGRGQAEDVGRELAELCAGRRVRFVCSI ALRAQQTAMLAARTYGEAVDERNVPVEVRTGLHEVFAGEHEMSGSEDTHREYMVALRGWL DGDESARMPGGESYVDVLERYQPVLEDLAAELEDDEDIVVVSHGAAIRVVTAHACGVDPD FAYTGYMPNCRFTLMEPQGQPFGQWTLKRWADTEV >gi|227860877|gb|ACLH01000043.1| GENE 6 4033 - 4380 508 115 aa, chain - ## HITS:1 COG:Cgl2834 KEGG:ns NR:ns ## COG: Cgl2834 COG3824 # Protein_GI_number: 19554084 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 115 1 114 114 123 55.0 1e-28 MYEVSEERFEEMVGEALDKIPDRFVNQMRNLVILVEEEHPENPELLGLYEGVMLTQRTAS HTGYLPDTISIYRQPLQAISNSEEELAHEVLVTVFHEVGHYFGFEEERLHELGWG >gi|227860877|gb|ACLH01000043.1| GENE 7 4409 - 5524 1260 371 aa, chain - ## HITS:1 COG:no KEGG:cauri_2394 NR:ns ## KEGG: cauri_2394 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 359 5 363 375 610 100.0 1e-173 MSTSSAWRSASAIRVVLVAAVAAAVFMASYGLFSGGPTGTNSAGHGSASSSADGSQAADP SAADGEAAPFTTASAGACVTWDIAPDGTATGFEQISCDKPHRFEVSAREDLSTYPTSEFG PNATRPDITRQNALRDELCEVPTVSYLNGKWDPNGRYDIASILPPAASWDQGDRTLLCGL QTTDANGVPQESTGKVSEVDQAVVAKPGECRKVDDKQALTTVPCQEPHQMETVSVINLAE KFPDGYPSDEDMDKFLSETCTQNAMDYLGGEENLYQSTLQPFWGAMNRETWESGSRSVNC SLIHIKDGHFSEITGSATGGREALSINGAPPTEQPKRNPLRDPNAQPGGENAEPAGANDA PATPEAAAPAL >gi|227860877|gb|ACLH01000043.1| GENE 8 5598 - 6329 669 243 aa, chain - ## HITS:1 COG:Cgl2832 KEGG:ns NR:ns ## COG: Cgl2832 COG2188 # Protein_GI_number: 19554082 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 5 241 27 263 266 332 68.0 3e-91 MAPHIITDGPVPKHAQLRDILSELCRTTLKPGDILPGERILEETYGVSRITVRRAIGDLV AEGRLRRVRGKGTFVAPNPLVSRLHLASFSDEMGYQKVQASSRILLGERSTAPSEVCDFF GTESTVAHTHLRRLRLGDGEPYSIDDGWYNSAFAPTLLENDIYNSVYAILDSTFKVPITE AEQTVTAVAAEEDIAELLDVSPGTPLLHITRLARSGDRPVEWCSSVYRTDRYRLTTHVSR ARM >gi|227860877|gb|ACLH01000043.1| GENE 9 6396 - 7658 1495 420 aa, chain + ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 418 11 428 432 691 83.0 0 MIDLKFLRENPDVVRASQVNRGEDPSLVDQLLAADEQRRAAIVKADQLRSEQKAFGKKIG QASPEERPALLEGSNELKEKVKAAGEEAAAAEAKVTELQYQLSNVVEGAPAGGEDDFIVL EEVGEKPQFDFEPKDHLELGETLGLIDVKRGAKVGGARFYYLTGDGAFLQLGMLMLAAQK AREAGFKLMIPPVLVRPDVMQGTGFLGQHSDEIYYLPADDLYLVGTSEVALAGYHKEEII DLSKGPLQYAGWSSCFRREAGSHGKDTRGILRVHQFDKLEMFVYCKPEDAEEMHQKLLNM EKDMLEAMELSYRTIDIAGGDLGSSAARKFDNEAWVPTQDTYRELTSTSNCTTFQARRLS TRYRDENGKTQYAATLNGTLATTRWLVAILENHQQADGSVVVPEALRPFVGKDVLYPVNS >gi|227860877|gb|ACLH01000043.1| GENE 10 7748 - 9493 1441 581 aa, chain + ## HITS:1 COG:MT3925 KEGG:ns NR:ns ## COG: MT3925 COG0204 # Protein_GI_number: 15843440 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 8 242 4 236 259 194 43.0 4e-49 MSAVTNFLYRQITHIGRGVTLAQGLKMRLSGEENIPDKGGAVIVCNHTGYMDFLFGAFLA YRKRRLVRYLAKASIFRTPVAGQLFQVMGHVPVDRIDGGASIVKGIELAKSGELVGVFAE GTISRSFEIRSMRNGAARIAHGAGVPIIPQVIFGSQRIWTKGQKKHLGRTKTPVLIKALE PYYTTGDFDADIAEVRRRMQEALEGLWADYEAEFGPMPAGEYWVPARKGGGAPTLEESEA QDSEVESERYRVRRLRDDLTNLKDRVSEATVELMRDRMALMKRANSEESGAELGDENADA TQESDGAQVESSAAEKGKERPRTAPETLEWIKENLNSVVEEAMRGVGEGRDKVTEVMAQL KSDVVEAQASMTASSKEIFAGSVVEQGLLSAATQSRIIVSRLPHRVKAQYSVVPRVIVAD QSALSMENGEISKRLQEALTQLRPQVEEFVVLSPQGEVLDAAAFGDLPQSCWRIACSEGA EGVQFNDAPGGVVVTASSPAEGLAAVAKKVGAEPADLLFFANEPGDETFAEGGEDIAVRM VALETAPIEVIKAAQAVTYSAERCGMAEVLEAMARLQQEKE >gi|227860877|gb|ACLH01000043.1| GENE 11 9824 - 11548 2235 574 aa, chain + ## HITS:1 COG:ML0713 KEGG:ns NR:ns ## COG: ML0713 COG0578 # Protein_GI_number: 15827301 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Mycobacterium leprae # 3 568 13 575 585 566 54.0 1e-161 MTTTSINSFNPEYFEKTWNDYSTEDYDIVIIGGGSVGAGAALDAATRGLKTAVLESQDFA AGTSSRSSKMFHGGLRYLAMFDFRLVAESLKERELNMSTLAPHLVKPLKFIFPLTHRGWE RVMMFGGFTLYDLMGGAKSVPMQKHLTRKGVLKVTPGLKEDAVVGGVRYYDTLVDDARHT MTVLRTAAEYGASVRTGTEVIGFEKDGRGRITAAKVRDLETGRETTVKGKAFINATGVWN DKIQDMAGAEGKFTVHASKGVHIVVPKDALDAEAALCFVTEKSVLFVIPWGEYWIIGTTD TDWEKGLSLPDPAPTKADIDYILDEVNQRVRDKITRDDIVGVYSGLRPLLSGKSDSTTNL SRNHAVARVAPGMVSVAGGKYTTYRVIGKDAVDLAAKELGTKVSESVTERTPILGADGYH ALANQIPALARRYNLSEDRIEHLLGRYGSLIGEVLAPAADDATLLESVPGAESYIWAEVR YAVTHEGALHIDDIVSRRLRVAIEFADRGVAAAQPIAEFVAPLLGWEQADIEREVSHFTK HTEAELAAEAALTDREANDILERAGSARATKEEA >gi|227860877|gb|ACLH01000043.1| GENE 12 11623 - 12360 1012 245 aa, chain + ## HITS:1 COG:SA1140 KEGG:ns NR:ns ## COG: SA1140 COG0580 # Protein_GI_number: 15926882 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Staphylococcus aureus N315 # 4 231 1 219 272 170 49.0 2e-42 MTGMDAFLWEFIGTALLLLLGNGVCAVVNLRTSGARGSDWIVIAMGWGLAVFIGASVADP SGGHLNPAVTIMLAVNGSLEWSLVPYYLLGQILGAMLGAFLAWATFKQLFDANNLDEAGN VTGANKNTGGIFFTAPAHPNNGWNAVTEFIATCVLLMFIAFGPAGGELGPLKYFAVAFVV VSVGLSLGTATGYAINPVRDLGPRIMYAFILPIKDKGSANWGYAWVPVVAPTLAAVAVGL LSMAL >gi|227860877|gb|ACLH01000043.1| GENE 13 12397 - 13944 2180 515 aa, chain + ## HITS:1 COG:Cgl2828 KEGG:ns NR:ns ## COG: Cgl2828 COG0554 # Protein_GI_number: 19554078 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Corynebacterium glutamicum # 5 504 8 507 509 688 67.0 0 MTTKSYVAAIDQGTTSTRCIIFNHDGEQVSVGQLEHEQIFPEKGWVEHDPEEIWSNTRRA VGEALANGDINVEDIAALGITNQRETTVVWDKNTGKPVYNAIVWQDTRTTDICKELAGDE GADKWRRRTGLIINSYPAGPKVKWILDNVEGARERAEKGELLFGTIDTWLLWNLTGGADG DNGQEALHATDVTNASRTLLMDIEKLEWDEELCKEMGIPTSMLPEIRPSLGDFRTVRERG SLSGVPIRAILGDQQAAMFGQGCFRPGSAKNTYGTGLFLLLNTGTTPKFSENGLLTTVCF QREGERPVYALEGSVSMGGSLVQWLRDNLQLIPNSASIENLAREVKDNGGVYIVPAFSGL FAPYWRPDARGVIVGLTRYANRKHLARAVLESTAYQTRDVADAMIADSGVEITELRVDGG MTMNELLMQFQADMLGVEVHRPKNVETTATGAAFAAGLDSGFWDDLSVLGAQQGDFKVWK PQREKEEVEALYRDWKRAIKRSLNWEDVDDDDVIA >gi|227860877|gb|ACLH01000043.1| GENE 14 14134 - 14979 714 281 aa, chain + ## HITS:1 COG:Cgl2829 KEGG:ns NR:ns ## COG: Cgl2829 COG0561 # Protein_GI_number: 19554079 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 10 281 7 278 278 260 49.0 2e-69 MASDVFSDRAPRLIISDIDGTLLDRNHRVPRRNREAVARAVAAGSEFALATGRPFRWIMP VLEQLTVRPVCVTSNGAVIYDSAEDRVLSAHELSPEALAETVEVATKVLEPHGGVGFGAE RAGGSVMDPVEELFVVESHYSENALFEGFGLVSVGELVSRPAVKLLIRNTAFSAPELYGL IAPHIDPELAHVTYSMSEGILEVAAPNVTKRRGIKWLAEHHGIAREEIIAFGDMPNDIEM LEWAGCGVAMENAHPDVVAAADAVTVAHHQAGVAKVLERWF Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:25:22 2011 Seq name: gi|227860876|gb|ACLH01000044.1| Corynebacterium aurimucosum ATCC 700975 contig00106, whole genome shotgun sequence Length of sequence - 1849 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 9 - 1103 177 ## cauri_2384 hypothetical protein + Term 1168 - 1213 -0.9 2 2 Tu 1 . - CDS 1202 - 1849 722 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis Predicted protein(s) >gi|227860876|gb|ACLH01000044.1| GENE 1 9 - 1103 177 364 aa, chain + ## HITS:1 COG:no KEGG:cauri_2384 NR:ns ## KEGG: cauri_2384 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 364 1 364 364 670 100.0 0 MGDLETYFSYRSSGLDLVGLAVGSVDDLRARGASLADAVELAGLHGAYFGPTRFTGKQRQ ARAAAVAQRHDVATLSLIESYTARVKKELDAWNLRVRLAGTPADRIPKVAKDRLKQLQPR RVPEPGVRLTYRKAGPHSLTITDSALRISEMRGTLESINPADLLDAAGRVFFEQSHGGTK PAVATNVVVTLDELDRIVRGEGDDIELVLTNGGRMTGREFVTYKFAEVGYVTLVHPTVGP VWLHRVRRLAGFEQRVMASAEHPTCAREGCNKPADYCQVHHLVPWQAGGATDPPNLTMLC AYHNGINDDDPDKPTGAGYVFRLRGGVDYVPPWAEPITSQPAYQAAQAALKQQANGDLPV PPDT >gi|227860876|gb|ACLH01000044.1| GENE 2 1202 - 1849 722 215 aa, chain - ## HITS:1 COG:Cgl2827 KEGG:ns NR:ns ## COG: Cgl2827 COG5479 # Protein_GI_number: 19554077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 22 212 470 689 692 67 30.0 2e-11 ATGASGSTSTDWGSGNTSTPDSSGSAPKNNAPSAPAPAAPAQEATSSLGDTEIPMSTVTA LVGLAGTLFAIMYARSDQQIDTDKTVNGLPVEQIPGIVTKVLSLSKNEGLKETWTAVLNA FGPALGLAVGGPDESAGIIYQLFQNGVVLSSEDTGTHALVGRIAKEWASGDNSATLGLPT SDEVPTGLGKEVRVQFQGGSIVYNPETEQIQVFTD Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:25:39 2011 Seq name: gi|227860875|gb|ACLH01000045.1| Corynebacterium aurimucosum ATCC 700975 contig00107, whole genome shotgun sequence Length of sequence - 35225 bp Number of predicted genes - 28, with homology - 27 Number of transcription units - 15, operones - 5 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1416 1490 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis - Prom 1449 - 1508 2.5 2 2 Op 1 . + CDS 1553 - 2755 1912 ## COG0562 UDP-galactopyranose mutase 3 2 Op 2 . + CDS 2837 - 3049 182 ## cauri_2381 hypothetical protein 4 2 Op 3 . + CDS 3126 - 3734 928 ## cauri_2380 hypothetical protein + Term 3808 - 3846 -0.3 5 3 Tu 1 . - CDS 3731 - 4123 416 ## COG3547 Transposase and inactivated derivatives + Prom 4711 - 4770 3.8 6 4 Op 1 . + CDS 4878 - 5069 159 ## cauri_2378 hypothetical protein 7 4 Op 2 4/0.250 + CDS 5143 - 7116 2641 ## COG1216 Predicted glycosyltransferases 8 4 Op 3 4/0.250 + CDS 7106 - 7633 471 ## COG0671 Membrane-associated phospholipid phosphatase 9 4 Op 4 . + CDS 7630 - 8637 1254 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 10 4 Op 5 . + CDS 8649 - 10394 1540 ## cauri_2374 hypothetical protein 11 5 Tu 1 2/0.250 + CDS 10539 - 11570 1515 ## COG0627 Predicted esterase + Term 11585 - 11622 8.4 + Prom 11611 - 11670 2.5 12 6 Op 1 . + CDS 11792 - 13786 2961 ## COG0627 Predicted esterase 13 6 Op 2 . + CDS 13795 - 14313 389 ## cauri_2371 putative secreted protein 14 6 Op 3 . + CDS 14368 - 15300 1122 ## cauri_2370 putative carbohydrate esterase 15 7 Tu 1 5/0.250 + CDS 15439 - 17298 2414 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 17316 - 17358 6.3 + Prom 17351 - 17410 2.1 16 8 Op 1 3/0.250 + CDS 17508 - 22289 6007 ## COG3321 Polyketide synthase modules and related proteins 17 8 Op 2 . + CDS 22286 - 23833 1825 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 18 9 Tu 1 . + CDS 24000 - 24101 123 ## + Term 24115 - 24147 5.0 19 10 Tu 1 . - CDS 24144 - 25157 552 ## cauri_2365 hypothetical protein - Prom 25218 - 25277 2.1 - Term 25160 - 25197 3.1 20 11 Op 1 . - CDS 25285 - 25632 487 ## cauri_2364 hypothetical protein 21 11 Op 2 2/0.250 - CDS 25633 - 26643 1092 ## COG0392 Predicted integral membrane protein 22 11 Op 3 . - CDS 26640 - 29093 3020 ## COG2409 Predicted drug exporters of the RND superfamily 23 11 Op 4 . - CDS 29101 - 29712 720 ## cauri_2361 hypothetical protein 24 11 Op 5 . - CDS 29712 - 30485 1060 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 25 12 Tu 1 . + CDS 30844 - 32664 2507 ## COG1274 Phosphoenolpyruvate carboxykinase (GTP) + Term 32679 - 32718 9.1 - Term 32667 - 32704 8.7 26 13 Tu 1 . - CDS 32719 - 33474 935 ## COG0500 SAM-dependent methyltransferases 27 14 Tu 1 . + CDS 33499 - 34590 838 ## COG0438 Glycosyltransferase + Term 34725 - 34758 2.1 28 15 Tu 1 . - CDS 34514 - 35224 566 ## cauri_2356 hypothetical protein Predicted protein(s) >gi|227860875|gb|ACLH01000045.1| GENE 1 3 - 1416 1490 471 aa, chain - ## HITS:1 COG:Cgl2827 KEGG:ns NR:ns ## COG: Cgl2827 COG5479 # Protein_GI_number: 19554077 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 31 441 6 451 692 360 47.0 4e-99 MAHTILGVTVHLKRRLVPAKSTWSTPVITTVTSIAVVAAAAVGGQTLIHTQEAGSGPIEV SSASESFGSGETVVVDDPAIAAQGEGEGPRAVKQFHRDETFSSFAVTWKGARDVAAFVRA KQPDGSWSEWYDMDSMSYNNDDPNATNGTELIFVGDTNDVQVSINNVDLVTGSNLDEEFT ETPVEDAALDDASFNVGDIAPVAETEELPVNSDVEGLEAVFMDGNAQEGEVIEPTAETDG MPRVVSRAGWGANENIRCKGADYDDGVKAIALHHTAGSNNYTRAQAAAQVRAAYKYHAQN LGWCDIGYNALVDKYGTIYEGRYGGLDKAVQGAHIGGFNRNTWGISMIGNYETAQPTEAL LESVTDLAGWKGAISGVDPTSRVSLRSEGFNGSRYPAGTSAPVYGLFGHSDVHFTACPGR YTIAQWPKIREAAHKKYRSIKSGASGSTSTDWGSGNTSTPDSSGSAPKNNA >gi|227860875|gb|ACLH01000045.1| GENE 2 1553 - 2755 1912 400 aa, chain + ## HITS:1 COG:Cgl2826 KEGG:ns NR:ns ## COG: Cgl2826 COG0562 # Protein_GI_number: 19554076 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Corynebacterium glutamicum # 6 400 7 401 401 685 83.0 0 MLMTAYDLIVVGSGFFGLTVAERAASQLGKKVLIVERREHLGGNAYSEAEPETGIEVHKY GAHLFHTSNKRVWEYCNQFTDFTDYQHRVFAMHDGTAYQFPMGLGLINQFFGRYYSPDEA RQLIKEQAGEFAVDEAKNLEEKAIALIGRPLYEAFIRDYTAKQWQTDPKELPAGNITRLP VRYTFNNRYFNDTYEGLPVDGYAAWLEKMAEHELIDVRLNTDWFDVREELREASPNAPVV YTGPLDRYFDFAEGELGWRTLDFDMEVLETGDFQGTPVMNYNDADVDYTRIHEFRHFHPE RADKYPKDKTVIMKEYSRFAEKGDEPYYPINTPEDRSKLEAYRKLAAAEARENQVLFGGR LGTYQYLDMHMAIASALSMFDNKLAPYFRDGQAITQERGH >gi|227860875|gb|ACLH01000045.1| GENE 3 2837 - 3049 182 70 aa, chain + ## HITS:1 COG:no KEGG:cauri_2381 NR:ns ## KEGG: cauri_2381 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 70 1 70 70 81 100.0 1e-14 MAQRKKKRADRSMWKMSPERLEEHLKLRSRATRIPDKKKEQSKKACRNTRRAFGRLWGTF CQRAELDQRK >gi|227860875|gb|ACLH01000045.1| GENE 4 3126 - 3734 928 202 aa, chain + ## HITS:1 COG:no KEGG:cauri_2380 NR:ns ## KEGG: cauri_2380 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 202 1 202 202 364 100.0 1e-100 MTSPNARRFDTLRQDLHADYGHEYTAQEIDSFLDATIERHEAGATLEEFIPVMVEREVRE HFGTHRIHVRFSAGADHALAQAAVALTKKYAGNALLVDAAVAHPENDPDSHMAHVLQERG MAEHPDRYVEDLRLVTIPDFIVYLGREVPRDEAGKDVKIWDIATAETVEETRELADDLGA RVLYMLNRLGIEPISEDAAVTA >gi|227860875|gb|ACLH01000045.1| GENE 5 3731 - 4123 416 130 aa, chain - ## HITS:1 COG:Cgl1010 KEGG:ns NR:ns ## COG: Cgl1010 COG3547 # Protein_GI_number: 19552260 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 129 1 132 402 234 87.0 3e-62 MAYDFVIGVDVGKYFHHACVLDPHGRQVLSKRINQHEGSLRKLFGQFLADNASVLVIPND IGRLTVAVTQDMGADVRYLPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDSLRSVD RVEEVFIQLI >gi|227860875|gb|ACLH01000045.1| GENE 6 4878 - 5069 159 63 aa, chain + ## HITS:1 COG:no KEGG:cauri_2378 NR:ns ## KEGG: cauri_2378 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 108 100.0 7e-23 MTIEVDFLLAPHEVGKDIKIWDIATAETVEETRELADDLGARVLYMLNRLGIEPISEDSA LTA >gi|227860875|gb|ACLH01000045.1| GENE 7 5143 - 7116 2641 657 aa, chain + ## HITS:1 COG:Cgl2821 KEGG:ns NR:ns ## COG: Cgl2821 COG1216 # Protein_GI_number: 19554071 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Corynebacterium glutamicum # 3 657 2 663 663 877 64.0 0 MWRTEDIVTANNTAAYEPVQRILLPKRGEPVDVRMLYLIESEQNRERLSWSGRTSVTIPA GEEASFETYFNAFPAAYWRRWSQLKSIVLVMDVEGEANISLYRSKQDGQRIAVANHVVTT GHHEFELPLKNFEDGGLLWFDASAVEDTVLSNAAWCAPHAPNPQLLPDGSEYPAQEKRVA VGIPTFNRPTDAVAALQALAEDPVVDGIIDYVLMPDQGNQHPADEPGYDEAVAHFGERFR EFRQGNLGGSGGYSRIMFEALENTDSPYILYMDDDIAIEPDSILRAVQAARYASKPFIVG GQMLNLQERSQLRTTGERVNRADFMWGAAEHAVYDHDFAKYPLRAIGDAQSHLDPKKYDS RALHRRVDVEYNGWWMCLFPRVVAESIGQPLPLFIKWDDTEYSLRAAAHGFPTVTWPGAA IWHMAWADKDDAIDWQAYFHLRNRLIVAALYHEGDARGITKSIFKSTLKHTMCMEYSTMA IQLEAMKDFLAGPDQLFDILESSLPRIAAIRKEFPDAVIIDSADQLPAPTGAPGVPTRNI GGRLGKIKKIPWLIKSAKHLVTKEDPAHHEAPQLNLTPEEARWFTLSRVDSATVSTAGGT GVAFRKRDRELALELVKSTRELLKEIEENFDDLRAEYRAALPELTSRESWRKVFDAQ >gi|227860875|gb|ACLH01000045.1| GENE 8 7106 - 7633 471 175 aa, chain + ## HITS:1 COG:Cgl2820 KEGG:ns NR:ns ## COG: Cgl2820 COG0671 # Protein_GI_number: 19554070 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Corynebacterium glutamicum # 5 174 1 167 168 164 58.0 1e-40 MPNKLSVAESHVLEKIQDTAFEVPGVLPTARGLSHFGEHALGWLALSGLGAAVNYQKPAR RRQWVAVGVGAFTAHAASVVIKRIVRRKRPDYDYVKVGVKTPSKLSFPSSHATSTTAFLV GAAHVLGTPAPLVGVPVMMASRMVLGVHYPSDTAIGALLGAATAEACHRYERKTA >gi|227860875|gb|ACLH01000045.1| GENE 9 7630 - 8637 1254 335 aa, chain + ## HITS:1 COG:Cgl2819 KEGG:ns NR:ns ## COG: Cgl2819 COG0382 # Protein_GI_number: 19554069 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Corynebacterium glutamicum # 1 331 1 330 332 474 75.0 1e-133 MSERPNRVDDGEQKVFHSEPHTSGIDTGRKRKPPKNLADGMVKALRPKQWVKNVLVLAAP AAAGAESLFHTRVLLDVLLAFIVFCMGASSIYLINDARDVEADRAHPTKRFRPIAAGVLP VNLAYAMAAVLIIGSIGLSFLATAGLQLAIVMAIYIGLQLGYCFGWKHMPVIDIALVSSG FMLRTMAGGVAAGIVLSQWFLLVAAFGSLFMASGKRYSEILLAQRTGAKIRKSLEGYTPT YLRFVWTLAATAVVMSYSLWGFQLSNESDGPASVWYQVSMVPFTIAILRYAADVDRGNGG APDEIALEDRVLQILALLWLACIAMAVYIMPAVMG >gi|227860875|gb|ACLH01000045.1| GENE 10 8649 - 10394 1540 581 aa, chain + ## HITS:1 COG:no KEGG:cauri_2374 NR:ns ## KEGG: cauri_2374 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 581 1 581 581 1035 100.0 0 MRKSDTRTVAALSALASVIVIGVFSFWGGFARRWISDDGLIVLRTVRNLEEGNGPVFNAG ERVEANTSTLWQYLILLVRWVTNAPLESIAVNLGLLLAVAAMVLGAWATARAFYRSGQFS APLVAPAGALVYLALPPARDFFTSGLEWGLSIFYLAGLWALLQHWAQSRTNTSAYWLALW AGLSWLVRPEFALYGGLAGLLLLAAHRNWKVWLGILGAALPIPAGYQFFRMGYYGLLTPH TAVAKSASSSAWDSGLNYLQDFVGPYALYLPVIVLAGAALWTFRAQLRPAALRSSTTVSY LMVGAAAVHVLYVLRVGGDFMHGRMLLLPLFAALLPVFVLPLKGLVSALAAAFCAVWAVV IVLRGHPTDWEAYEQPLSIVDERDFWTYATNREAGYPPRSAKDYLGMKFMRGYEEAGEKL VDGDALATIYVEDEEKDLLNWLTVPREPGRDEPPTIYLVNLGMTSMNAPLNVRVLDTIGL ATPMAARMPREEGGRVGHDKHLDVEWQAALTGADIEYLPPWYDKDKTRQARAALESPQVQ ELIASYSAPLTWERFRANLAFSLTSGRTLMLSDDPSDYPVH >gi|227860875|gb|ACLH01000045.1| GENE 11 10539 - 11570 1515 343 aa, chain + ## HITS:1 COG:Cgl2817 KEGG:ns NR:ns ## COG: Cgl2817 COG0627 # Protein_GI_number: 19554067 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 30 343 31 341 341 404 67.0 1e-112 MSSLSSGLRTRVLSVVAAIAVALGLVVTAGTQEASAANRDWLRGDATGACEWDRVGYWVQ RCDVWSQAMGRNIPVQIQPAKNGGNAGLYLLDGLRATESTNAWINDVNAARTYVDHNITL VMPVGGAGSFYADWNGPATYDLVKPVNYQWETFLTQELPAYLEGNFGVARNNNSIAGLSM GATAAITLAGKHPEQFRQALSYSGYLTTTLPGAQTFMRLALLDAGGFNINAMYGSIINPK RFSNDPFNLIPDLAANGTDVYVSAASGIPGPVDQQRYRPEHIAAGVALEGFANATTRLWE LKARAMGVRLQTDYPGQGLHNWEQFGYQLERSKPQVLNVMNAW >gi|227860875|gb|ACLH01000045.1| GENE 12 11792 - 13786 2961 664 aa, chain + ## HITS:1 COG:Cgl2815_1 KEGG:ns NR:ns ## COG: Cgl2815_1 COG0627 # Protein_GI_number: 19554065 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 14 406 2 402 402 433 55.0 1e-121 MPNTASTQPRRSAKDSGLRSPSAARKGLTIAALPTAVAVGFALLPIANAQSSSSSTEGIT DLLGSSNLSDSFAPSNPPQRTPVETEYPKIEGLPEGVSVSRVEYLTNRHLKVYIKSAAMP DKEQVVQIQLARDWYSSPDKKFPEVWALDGLRARDDESGWTIETNILSQYADRNVNLIMP VGGESSFYSDWQKEDNGTHYMWETFLMRELIPVLEKGYRSNGNRAVTGISMGGTAAMNLA ERNPWAFKYVGSFSGYLDTTTTGMPEAITAAQADAGGFTSTNMWGDLYSQDWIDHDPKLG IENLKDMKVYVSAGNGKDDYGQIGSVAKGQANLAGVGLEAISRMSTQTFVDYAKRAGVEP VVKFRPTGVHSWEYWQFEMTEAWPYIADSLGLDKSDRGADCTPIGAIAEATKSGIIGNCV NNEYDVADRGKAQDFQAGTAYWSPETGAHAVIGRIGARYSELGGPTSWLGFPKTGEEKTP DGRGRYVHFEHGSIYWTPETGAWPISKDLFDAWGKNGFEGGDLKYPVSEPRKVGEGEVQD FENGVLTRNPDGSTHIVHGAIGAKYKELKAAESELGYPVGEEKAVNGGFFQEFEHGNIYW SMDSGAHYILKGKIFDEWGKHGWEQGEFGWPTKDYASIPAGGLTQSFQHGVIREVMGQVQ ADKK >gi|227860875|gb|ACLH01000045.1| GENE 13 13795 - 14313 389 172 aa, chain + ## HITS:1 COG:no KEGG:cauri_2371 NR:ns ## KEGG: cauri_2371 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 172 1 172 172 201 100.0 1e-50 MRLFSARPTVAAGAAVLLAAGTLLSACGSATVDEGDATETSVAPLERSSAASDESSASKA SESSASASGSASAERTPGEEPEDRGAREISEIPSPAPAQGPDQDFLDAVAEKGVNVDGVE DQLVGAAQASCQGDAVTVPAVAGQLIEQGRTELSHEDVVQLITEQGNKLCAQ >gi|227860875|gb|ACLH01000045.1| GENE 14 14368 - 15300 1122 310 aa, chain + ## HITS:1 COG:no KEGG:cauri_2370 NR:ns ## KEGG: cauri_2370 # Name: not_defined # Def: putative carbohydrate esterase # Organism: C.aurimucosum # Pathway: not_defined # 1 310 1 310 310 577 100.0 1e-163 MRKTLTVLAVVVLLAVIGGGAVHFLNTNEEGEQGNLAEPGPSQEEGDTSPEQPDWCPRVE FISAPGTWESAADDDPINPGANPNSFMLSITNPLKEAYVPEDVKVWTLPYTAQFKNINAQ HEMSYDDSRNEGTSRLEGELTYMHDTCPNTKFILSGFSQGAVIAGDVADRISGGNGPVPA ESVAGVALIADGRRQDGVGINPGAHVGGVGAEIALQPVSTLIQGIVPGATMRGERANGFG ELADRTFQICAPNDSICDAPLDVSNGLERARDLIDANGVHALYAYNPDVIEGTTANQWVT QWAKDTIDAH >gi|227860875|gb|ACLH01000045.1| GENE 15 15439 - 17298 2414 619 aa, chain + ## HITS:1 COG:Cgl2812 KEGG:ns NR:ns ## COG: Cgl2812 COG0318 # Protein_GI_number: 19554062 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 1 617 1 615 620 733 63.0 0 MDLKALIGQFFDEKGNIALPPHLTLAGLAEHVYASEQQAGIPDRPVMRQWVYTDNPEGTP RDITRSQVNTRIKAVAARLQQVGKMGDRVAILAGNSPEYIFGFLGAMYAGMTPLPLYDPN EPGHTDHLRAVFGDANPSIVLTNNISAAANRAYFADRPASERPRIISIDSLPDSLAQSWV NPLETEEGKAALAALQTAPIDHPAFLQYTSGSTRTPAGVLLTNRNIMTNVLQIFTAVQIK MPARVVSWLPMHHDMGIILATFVTILGFNLEIMTPRDFVQQPKRWIDQLKRQPIDEQLQG TYAVVPNFALELAARYGAPAEGETLDFSNVDGIVIGSEPVTESAVNSFWEVFGKEEYGLR RDTLRPSYGMAEASLIVTTPQTPERPIISHFDRERLAAGEAVIVEKSADSVAYASCGQGV VAQHLTIVDPETKAELPDGRVGEIWLHGDNRAAGYLDRAEETASTFHNTLGERLAEGSRV PNAPEDNNWLATGDLAAIVDNQLYITGRLKDLIVVAGRNHYPQDIEGTVQEASGHVRADS IAAFSVEGGSTEELVLLIERADGANPADDAAASEAIRSAVSAHHGVTPAAIQWFNANEIK RTSSGKIARRVAKKSYLAS >gi|227860875|gb|ACLH01000045.1| GENE 16 17508 - 22289 6007 1593 aa, chain + ## HITS:1 COG:Cgl2811_1 KEGG:ns NR:ns ## COG: Cgl2811_1 COG3321 # Protein_GI_number: 19554061 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Corynebacterium glutamicum # 1 1316 11 1334 1334 1579 65.0 0 MTVEELRGWLRTWVAQTTGLSAEEITDTKPLENFGLSSRDAVVLSGELENLLGIKLEPTV AYEYPTIAQLAERLVNGASGAPAESAPRGASPRSASLAGGDIAVIGYAGRFPGAKNVDEF WTMLVEGRAGTGPLPVGRWSEYSSDPITSEKMEQQNTDGGYIEDIASFDAEFFGLSPLEA ANMDPQQRILLEVAWEALEDAGVPANQLRGTATGVYMGSTNNDYGMLITADPAEMHPYAM TGTSSAIVANRLSYAFDLRGPSLNVDTACSASLVAVNQAVKDLRVGAADTALAGGVNILA SPHASIGFSELGVTSPTSAIHAFSDDADGIVRADAAGVLVLKRLEDAERDGDTIHAVIKG TAVNSDGHSNGLTAPNPEAQVDVLERAYADAGIRPQDVDYVEAHGTGTILGDPIEATALG RVLGPGRQAANPTLLGSAKTNIGHSESAAGVVGLIKVIEGMRHGVIPPNINYAGPNRYID FDAEHLEVVEDPREWPEYSGQKVAGVSGFGFGGTNAHVVLTDYRGLTHQDAPQVAIGEDQ PVALPVSGLLPSRRAAAASDLADYIEAENPNLLSLARTLARRNHGRSRAVVVASSSEEAV KRLRQVSEGTVSVGIAAADSPSVHGPVFMYSGFGSQHRKMAKDMIEVSPLFKERLEELDV IVQRESGWSILELVHDDAQTYNTETAQVAITAIQIALTDLLDTFGVRPAGVIGMSMGEIG AAYAAGGITAADAMLIACHRARLMGEGEASLPEDQQGAMAVVELSAEEIDALPGSIEPAV YTGPGMTTVGGPREEVLALVERLEGEGKFARALNVKGAGHTSAVDPLLGELYAEIAGIET RPLHTTLFSSVDRGKVYRPGTVLHDEDYWIRMTRKPVYLQEAAEAAFAAGHMQIVEISPN PIALMGLMSTAFAAGKADAQLLYSLKRKVDPTESLLDLLGKLYVAGTPVDYTKVFGSGEF VDAPHTHFRRQRFWTNARPSSGVSGLPGARVSLPEGAVAFSTNADQAPSALAILEAAAEA VTPGAHIAASEEHLDLPAKGEVTTIVRRTLGGLSVAVHYVDGATTKLVAEGFASTLNLAE PTPTAKPSLPQAVTAPQFADPDVGVDAVRWDPATESVEERLALIVSESMGYDVSDLPREL PLIDLGLDSLMGMRIKNRVENDFQIPPLQVQALRDASLADVITMVEEAVSEQPGSAAQAP ADAAADAPSAPADSSAVSAKDAAESAEEATVGVGVAPRDASERMVFGTWATFTGKAAAGV TSALPQVSEEVAEKIAERLTERAGIEVTVQQVHEAEALENLADLVREGLETEVEGNIRVL READGPAVFMFHPAGGTTVVYQPLTRRLPADVAVYGVERLEGSLEDRAAAYIEDILHYAR GRKVVLGGWSFGGALAYEVAYQLQERAARGEDTAEVAFIALLDTTQPAHPAPKTLEETKA RWGRYAAFAKKTYGLDFEPPYEMLETVGEDALMAMLAEFLSSTDASEHGLSAGVLEHQRA SFVDNQILGSLDMGRWASVSVPVILFRSERMHDGAIELEPAYAEVNPDGGWGVIVKDLEI VQLPGDHLAVPDEPAIGIVGKHMDEWIEEKIRK >gi|227860875|gb|ACLH01000045.1| GENE 17 22286 - 23833 1825 515 aa, chain + ## HITS:1 COG:Cgl2810 KEGG:ns NR:ns ## COG: Cgl2810 COG4799 # Protein_GI_number: 19554060 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Corynebacterium glutamicum # 2 515 4 516 516 773 78.0 0 MTSTADKLADLRERLERAQDPGSERSRARRDEAGRSTPRQRIAALLDEGSFVETGALGKT PGDPDAIYSDGVVTGHGRINGRPVCIYAHDKTVYGGSVGVTFGKKVTDIMDLAIKIGCPV IGIQDSGGARIQDAVTSLAMYSEIARRQLPLSGRSPQISIMMGKSAGGAVYAPVTTDFII AVDGEAEMYVTGPNVIKEVTGEEISSHDLGSARQQELNGNVSVVVPSEDEAFDLVRDLLD HLPLTCFDESPVFDAPSDDEVAEDTELDSFMPDDTNAGYDMMDLLTQLGDDDDLIEIQEN YAPNVITAFGRIDGKAVGFVANNPMHSAGCIDADAADKGARFIRICDAYNIPLVFVVDTP GYLPGVDQEKAGLIHRGAKFAFAVVEATVPKVSLIVRKAYGGAYAVMGSKNLTGDINLAW PTAQIAVMGSAAAVVMIAGKQLEAAETPEQRAMTKKMFMDFYDETMTAPYVAAERGYLDG MIKPSESRLALRRALRQLADKQEKDLPKKHTISPL >gi|227860875|gb|ACLH01000045.1| GENE 18 24000 - 24101 123 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSSVLDLSGDIINLVIMLLNQAGVNVGALSSK >gi|227860875|gb|ACLH01000045.1| GENE 19 24144 - 25157 552 337 aa, chain - ## HITS:1 COG:no KEGG:cauri_2365 NR:ns ## KEGG: cauri_2365 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 337 1 337 337 680 100.0 0 MKLGDLLGVLARGMHVVSLCAGHTREEMLALGATPRIARQLEGLHRVYFGQTAFTAKQRR ARETDHALDTLLQIERHVSRVKNSRQAWDLRVELCGTPEGEIAGVAKRRLAELKPEPTPG VRVRRSTGGMHKLIITDRPRAIANLVGTLKATSEDLLKAVHEVFSGSGAPKPALHAHVIV RLEQLDKIVRGEGDDILLQATDGGTMTGAEFLHTTFDERGFVSLFHPVEGPVNVYHGSRF ANDKQRLLLSAEHPTCAWLGCTRPAAECQMHHIRRWQDGGPTNLDNLVPLCKYHNAINDD DPARPTYRGRIDRIEGRMAWLPPDGGPPVLLPSPVWE >gi|227860875|gb|ACLH01000045.1| GENE 20 25285 - 25632 487 115 aa, chain - ## HITS:1 COG:no KEGG:cauri_2364 NR:ns ## KEGG: cauri_2364 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 115 1 115 115 142 100.0 3e-33 MRVAPLIDVLALALFAILARLAHGGLSFSSWVDAFWPWTVGALVGWVIIMAAKLSGLWKE GVVVWLSAIIGGMALWMLVNGRLPHWSFLIVATVMSALFFFGWRAIAAFASRSRA >gi|227860875|gb|ACLH01000045.1| GENE 21 25633 - 26643 1092 336 aa, chain - ## HITS:1 COG:Cgl2808 KEGG:ns NR:ns ## COG: Cgl2808 COG0392 # Protein_GI_number: 19554058 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 5 326 9 333 361 260 44.0 2e-69 MKKNWLTWIISLLILAALAWFFRDQLDFISEGLRRLRHAEPFPVVLVVFFALLSIAGMAE VMKRLIGAGGVKVPLRETYAITLASNAWSTTLPAGPAFSALLTFQVQRRWGASVALCSYF LFLSSIISSMFLALIGLGGVFFLNADMALGSLITTVVLMLAALGGIFWLTSHPVTLERWL RKLRPGPKRDRAIQEVRNLGEVHLSRGPFAVVAGASLVHRLADMAALWASVWAVTGEIPW LRAGADDTTLAGVALAFLAAKLAGSAQVTPGGVGTVEAALITPLVATGLTVVHATSAAII YRLISFALITIIGWVIYFAHYARDGFSYAALNRKES >gi|227860875|gb|ACLH01000045.1| GENE 22 26640 - 29093 3020 817 aa, chain - ## HITS:1 COG:Cgl2807 KEGG:ns NR:ns ## COG: Cgl2807 COG2409 # Protein_GI_number: 19554057 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Corynebacterium glutamicum # 1 741 1 742 772 883 65.0 0 MFYSWGRFSYAHRKVIPLLIVGLILGLFVGFGTRLEERMSQEGWEDPGAASTSAAQIELE TFGRDNSGDVILLFDDPDAHAAEAKAFLDELQTQYPEQIDSVTSYFDKRNPNLITQDHST AFAAIGLKGDGEQTLKDFRAIEDSLHSSGLPVQVAGATAVADALDEGMAKDISRAEKAAL PLVGLLLLVVFGSVVAAFMPLVVGGLSILGSLGILSILAGFLQVNVFAQAVVTLLGLGLA IDYGLFMVSRFREELDKGRSTQEAVAITTATAGQTVVFSAAMVAVSLSGLFLFPQAFLKS VAYGSISAVGLAALLSVMVLPSLFGLLGPNIDKWTVRKTSRRGRRIEDTWWYRMPRWAMG RAGLMTTAICALLIALTLPVLGVKFGGINETYLPPNQDARVAQDQFNEQFPSFRTEPVKL VVKNATNEQLVDVVMQARSIQGLTEPMGPKTATVDGTTVLGAGIQDRDDYARIVHELENI EAPEGVELYVGGTPAMEVESLDALFDTLPWMALYVVLATFILMALVFGSFILPLKAIIMT LLSLGATLGILTLMFVDGLGSGLLNFTAGPLMSPILVLIIAIVFGLSTDYEVFLVSRMVE ARRRGASTDEAIAAGTAHTGGIITAAALIMIVVAGAFGFSDIVMMKYIAFGMIFALLIDA TIVRMLLVPAVMHLLREDNWWAPRFLTRLTHRLGGDNTPAAEPDLATASAAAPTPTAPAL NNEEAAPAKQAVPSTTVTTERDEPRSSAGSTGQAEKPVVPITPTAPVEKPGSRGEVEGTS ASRASEAAVRGDRSADTDAELIPFSELVKRLKSTDGR >gi|227860875|gb|ACLH01000045.1| GENE 23 29101 - 29712 720 203 aa, chain - ## HITS:1 COG:no KEGG:cauri_2361 NR:ns ## KEGG: cauri_2361 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 203 1 203 203 402 100.0 1e-111 MAGTYLLVWDAPNMDMGLGAILGGRPTAAYRPRFDAIGRWLVELAFDNDATPEAAVFTNV TPGGADVIRPWVEAIRNVGFAVFAKPKLHEDDDVDPDMVEYIKANRENLSGVIVASADGQ NFQHLLEQLNASGLPTCVLGFHEHASWALTHPDIEFVDLEDIEGVFREPLPRVNLDNLPP GGAWLQPFRPLSALLPERAPEHS >gi|227860875|gb|ACLH01000045.1| GENE 24 29712 - 30485 1060 257 aa, chain - ## HITS:1 COG:Cgl2805 KEGG:ns NR:ns ## COG: Cgl2805 COG0220 # Protein_GI_number: 19554055 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Corynebacterium glutamicum # 1 256 1 252 255 409 76.0 1e-114 MNSADSSQNPAAQMPHGRGLQTDFNAEFNNDLDYPRLGNVTFRRGTLTDNQNALFEEHWP QLGRLLADEPLDIPAWFGREGAKTIVEIGSGTGTSTAAMAPLEKDTNIVAVELYKPGLAK LLGSIIRNDIENIRMVRGDGIEVLMRMFAPESLDGIRIFFPDPWPKARHHKRRIIQSGTL NLFASRLKPGGVLHVATDHAGYTEWINELVEVEPSLDYKGWPWPECPILTDRQVITKFEG KGLDKEHVITEYLWEKK >gi|227860875|gb|ACLH01000045.1| GENE 25 30844 - 32664 2507 606 aa, chain + ## HITS:1 COG:Cgl2803 KEGG:ns NR:ns ## COG: Cgl2803 COG1274 # Protein_GI_number: 19554053 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (GTP) # Organism: Corynebacterium glutamicum # 2 605 3 608 610 1025 82.0 0 MTATIKGLVGELPTKNEKLISWISESVELFQPEEVVFVDGSQEEADRLAAELVEKGTLIK LNEEKRPNSYLARSNPSDVARVESRTFICTETAEDAGPTNNWAPPAAMKEEMTEAFRGSM KGRTMYVVPFCMGPISDPDPKLGVQLTDSAYVVLSMRIMTRMGQQALDKIGDNGDFVHAL HSVGAPLEPGQEDVAWPCNDKKYITQFPATKEIWSYGSGYGGNAILAKKCYALRIASVMA KEEGWMAEHMLILKLTNPEGKKYHIAAAFPSACGKTNLAMITPTIPGWKAEVVGDDIAWM KLREDGLYAVNPENGFFGVAPGTNYDSNPIAMKTMEPGNTLFTNVALTDDGDVWWEEMGE APEHLIDWHGNDWTPASTTKAAHPNSRYCVPITQCPSAAPEFDDWKGVKIDAILFGGRRA DTVPLVTQAFDWNHGTMIGALLSSGQTAAAEGKVGALRHDPMAMLPFMGYNAGDYLQHWI DMGEKGGDRMPAIFLVNWFRRGEDRRFLWPGFGENSRVLKWIVDRIEGNVDAVETVVGHT ARPEDIDLTGLDFDIEDVREALAVNPADWAGDMEDNKEYLTFLGSRVPSEVWDQFSALKE RVESAS >gi|227860875|gb|ACLH01000045.1| GENE 26 32719 - 33474 935 251 aa, chain - ## HITS:1 COG:Cgl2802 KEGG:ns NR:ns ## COG: Cgl2802 COG0500 # Protein_GI_number: 19554052 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 5 250 11 255 257 341 69.0 7e-94 MKRTRALATLRRSWRLLRSFRFEQTAPAIFYGGLAEDTAALVDALSRDQSLSLTGARVLD VGGGPGYFASAFAQRGASYVGLEPDVGEMSAAGIEVAQAVRGDGTRLPFADDTFDITYSS NVAEHIPNPWDMGEEMLRVTKPGGLVIVSYTVWLGPFGGHETGLWEHYVGGEFARDRYTH RHGHPPKNVFGTSLFALSAREGLDWARRESSRGSELVAAFPRYHPWWAWWVLKVPVLREF LTSNLVLVLRA >gi|227860875|gb|ACLH01000045.1| GENE 27 33499 - 34590 838 363 aa, chain + ## HITS:1 COG:Cgl2800 KEGG:ns NR:ns ## COG: Cgl2800 COG0438 # Protein_GI_number: 19554050 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 354 1 360 367 436 60.0 1e-122 MKILLLCWRDSTHPQGGGSERYLERVGEYLAAQGHEVVFRTARHMNAAKRERRNGVLYSR AGAKFSVYPRALLSILLGRRALRGADVVVDTHNGIPFFARLATRAPVVILTHHCHREQWP VAGPVLARLGWFLESRVVPALYRENTWVTVSEASKRDLEKLGIHGAHIIENGVDPLPSHV PTLEREADIHLVTLSRLVPHKQIEHAMDTVARIPGALLDVIGSGWWESHLREYARAHGVE ARVRFRGQVTEDYKHALLARADVHLMPSRKEGWGLAVMEAAQHGVPTVGYAFGLQDSVIH GKTGVLVQREEEFAPAVRMLVADPLLRHRLGNAARELAATFSWEKTGARFEELLEAEVRT RRR >gi|227860875|gb|ACLH01000045.1| GENE 28 34514 - 35224 566 236 aa, chain - ## HITS:1 COG:no KEGG:cauri_2356 NR:ns ## KEGG: cauri_2356 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 11 236 269 494 494 354 100.0 2e-96 AVAALAVLGATRLPRRELRPLAALAVLGMSLAVLGALAPGVTGFAVEHIPGAGLLRDSSK LTLLALPLAVAGIGALRQLPAALALCACLLQAPDAPKELAVLRPRETGIDRQLVEDLDGR LTFFADRPAMVPLDGGIALDPYSKAANKLDSGALTVDGINVDEPSPRYLAAAEAWGNRDL DRLEELGVGAVVEAGSIVATTNAQPAPAPWGLSAAWCALPLLATLRSARRFSPTKK Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:26:38 2011 Seq name: gi|227860874|gb|ACLH01000046.1| Corynebacterium aurimucosum ATCC 700975 contig00108, whole genome shotgun sequence Length of sequence - 37585 bp Number of predicted genes - 33, with homology - 32 Number of transcription units - 15, operones - 10 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 728 356 ## cauri_2356 hypothetical protein 2 1 Op 2 . - CDS 735 - 1709 1084 ## cauri_2355 hypothetical protein 3 2 Tu 1 . + CDS 1763 - 2950 1088 ## COG1835 Predicted acyltransferases - Term 2982 - 3018 -0.8 4 3 Op 1 . - CDS 3110 - 6385 2853 ## cauri_2353 hypothetical protein 5 3 Op 2 . - CDS 6426 - 6623 351 ## cauri_2352 hypothetical protein 6 3 Op 3 . - CDS 6655 - 7158 671 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 7 4 Op 1 . + CDS 7217 - 8266 1087 ## COG1472 Beta-glucosidase-related glycosidases 8 4 Op 2 . + CDS 8301 - 9992 2055 ## COG2720 Uncharacterized vancomycin resistance protein 9 4 Op 3 . + CDS 9996 - 11771 269 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 10 5 Op 1 . - CDS 11772 - 12458 29 ## cauri_2347 hypothetical protein 11 5 Op 2 . - CDS 12468 - 12656 161 ## cauri_2346 hypothetical protein 12 5 Op 3 . - CDS 12619 - 12879 133 ## - TRNA 12751 - 12824 78.6 # Gly CCC 0 0 + Prom 12764 - 12823 1.9 13 6 Op 1 2/0.000 + CDS 12912 - 13484 747 ## COG0717 Deoxycytidine deaminase 14 6 Op 2 . + CDS 13538 - 14872 1825 ## COG1004 Predicted UDP-glucose 6-dehydrogenase - Term 14620 - 14653 1.3 15 7 Tu 1 . - CDS 14802 - 16028 946 ## COG5438 Predicted multitransmembrane protein - Prom 16048 - 16107 1.8 + Prom 16004 - 16063 2.6 16 8 Tu 1 . + CDS 16141 - 17517 989 ## cauri_2343 hypothetical protein + Term 17542 - 17576 -0.9 17 9 Op 1 . - CDS 17612 - 18835 1475 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 18 9 Op 2 . - CDS 18846 - 19457 783 ## cauri_2341 hypothetical protein 19 9 Op 3 . - CDS 19477 - 20694 1530 ## COG0475 Kef-type K+ transport systems, membrane components 20 9 Op 4 . - CDS 20764 - 23397 2323 ## COG0247 Fe-S oxidoreductase 21 10 Op 1 35/0.000 - CDS 23507 - 25450 203 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 22 10 Op 2 . - CDS 25451 - 27169 168 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 27235 - 27294 2.2 23 11 Tu 1 . - CDS 27370 - 27786 420 ## cauri_2336 methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase (EC:2.1.1.74) - Prom 27823 - 27882 2.9 + Prom 27810 - 27869 2.6 24 12 Op 1 4/0.000 + CDS 27949 - 28731 887 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 25 12 Op 2 18/0.000 + CDS 28731 - 29627 1181 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 26 12 Op 3 . + CDS 29627 - 30919 1738 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 + Term 30926 - 30973 8.4 27 13 Op 1 . - CDS 30964 - 31587 781 ## cauri_2332 hypothetical protein 28 13 Op 2 . - CDS 31623 - 32477 558 ## cauri_2331 hypothetical protein - Term 32501 - 32527 0.3 29 13 Op 3 . - CDS 32569 - 33180 629 ## cauri_2330 putative secreted protein - Term 33189 - 33221 4.7 30 13 Op 4 . - CDS 33237 - 33725 468 ## cauri_2329 putative secreted protein 31 14 Tu 1 . + CDS 33837 - 34415 728 ## COG0775 Nucleoside phosphorylase + Term 34532 - 34587 2.2 - Term 34439 - 34478 -0.4 32 15 Op 1 . - CDS 34551 - 35786 1371 ## COG0628 Predicted permease 33 15 Op 2 . - CDS 35822 - 37585 2191 ## COG1012 NAD-dependent aldehyde dehydrogenases Predicted protein(s) >gi|227860874|gb|ACLH01000046.1| GENE 1 2 - 728 356 242 aa, chain - ## HITS:1 COG:no KEGG:cauri_2356 NR:ns ## KEGG: cauri_2356 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 242 1 242 494 362 100.0 7e-99 MTTSLATRTALGAWGVVLVLAVCWPFVLPGEFLWRDMVLLDRPALSAAAFGAGDLPARNA PQDGVLALFGGAWLARVFILGAASASAWVAGLWTCQRPQFSPWAAAAAMACAVANPFVIE RLLQGQWSLAVAAWLAPVIAWGCLSARPRVAWLALWAASLTPTGGLFGGLIAVACEREGR RRWLFAGGSVLLWLPWLVPSLAAGNPGTHGDPAAQAAAFAPRAEAYVGAVGSLLGFGGIW NA >gi|227860874|gb|ACLH01000046.1| GENE 2 735 - 1709 1084 324 aa, chain - ## HITS:1 COG:no KEGG:cauri_2355 NR:ns ## KEGG: cauri_2355 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 324 1 324 324 606 100.0 1e-172 MFLRSRLAQVTIAAAVFLILGSILPPLYNNQSRPLPRDLYITVHAEQDGVEFTRHTTTAP AEKDSVAHAESTTELTVDGDTFAHITEESLLNRESTYPVAGPNTTQHIDLSAFDLQVEDR IERDGISYFFPAGAEQRSYPFFDPLTQDAEPIDFLRDEKLDGIPTYVFHQDVAPVPLAEV FAFDNQRSGPAGDFYSPESLERYNLKPNSHVILEPFYAVSRTVWVEPTTGTILNEEEHPR VFWATDARQAQAMVDADDTQERALLDVPLSWSDSTRTERLDSVRRVIDTVKILSLVGWLG KAIGVALLAVAAAMFMRRHSAQSA >gi|227860874|gb|ACLH01000046.1| GENE 3 1763 - 2950 1088 395 aa, chain + ## HITS:1 COG:Cgl2797 KEGG:ns NR:ns ## COG: Cgl2797 COG1835 # Protein_GI_number: 19554047 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Corynebacterium glutamicum # 3 338 14 342 356 241 47.0 3e-63 MRFLPELEGVRALAALAVVITHVSFQTATGWAWAERLDYGVAVFFVLSGFLLWRRRHAHT AGQYLLSRVARLAPLYVVCVVAVLALLPDASPLTFPQVITNLTGTQLYIADGLVPGLTQL WSLCVEFAFYAVLPLLAWLLDRLSARPRVALIAGAGVLSLFWGFLSFVAGYESGDVNTQI WPPAYFSWFAVGMLAAEAEAAGVRVRAGRIVRPACWAVAAGCVWLASREWFGPQGLVHPE PGEFARRIAAGAVCGACIVVPVALAPRESWLSSAVMRALGRWSYGVFMWHVAVLAIAFPL LGVSAFSGAAWDFAVVLAFTVVVSCVLSAATYVLVEVPGRDLIRSLAFTRGRIAVPRSLP RQADNPAGSASASNASSGSLASPAGSDDSAGSVGS >gi|227860874|gb|ACLH01000046.1| GENE 4 3110 - 6385 2853 1091 aa, chain - ## HITS:1 COG:no KEGG:cauri_2353 NR:ns ## KEGG: cauri_2353 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 1091 14 1104 1104 1842 99.0 0 MVLVQPWGLTAADTKHDLVANPARFLAGALHTYTDTFTLGQLQNQAYGYLFPQGLFFLLA DPLPDWIAQRAWWFLVLAVGFLGFFRVARTVLPAAPGYAALVGSLLYALSPRTLTTLGAI SSETWPVMLAPWVLLPFLRPGRLCWRDAAPSVVAVACMGAVNATATLAACLPAGLILLWR RAGKTGLVWLAGCAAVSAWWIIPLLILGRYAPPFTGFIESAGVTTRWFNLAEILRGTTSW APFVDTERVAGNELATEPVFVLVTIGVAALGLVGLSRLPRLWGVMLLVGVAVLGTHAAWY LDALDGPLAALRNVHKFDPLVRIPLVLGVAAVVARVRLPRTLAPGRREAAGLLVCLVVVG ATAPAWAGRLLPKGAYEEVPAYWHKAADFMNSLDTRVLIYPPASFARQEWGWTRDEPAQP LLDVPWAVRDAVPLIPPEAIRGLDGAMAQIERDPTTAPFVLQRLGIGAVAVRHDLISGSA THIPGEVHTFGEVDVVVFDRDLSMNLAPTDPPRVAGGGESLALLSGPHELVSSDADIVTD TPTLRDRNYGTLSGPVSAPLAPDDPSTVRNRLRDYPSAGPLTQVVEHDGRVTASSSAADA SAFGGANPARSLTAAVDGENSTAWWPAPGDSGWLELHSDSTWTSPTLRLMTTGTTEVTIH NGDSKVTVTMEAYRARDIRVPGAKASTIRIEPQRRTGIAEASIVDQPTPRRIVTVPDTSP NAEQFLFQQDNEHILIRSFTAPRDMTVRVSGEKTVLIDGSPHTPNSTLDLSAGQHLVRTT GDWAALTDTASSLPAPLPINSDRPAPATGATPSAASGADHGYTPLAAGEPIEPADHHRLL ITGRAFNEGLRGELRSPSTAAISTPGSAQDAAPDSTPNSNSEPLALEPRSIDADTQAFLI PAGAGGTFHMSFAADRAYRVGLGLGGALAALTTALCLLVMARGPRSQAAAPASPTASAAS SGAYAAHDTTSTSPVADAALPVSSAASQMLSPARVAHSSTSARVLLALLIAATMALVAGL PGVAAAAAAWAITRWTTLRSDYLAGMLTLAAGAMLARAPWPAEGYAGDSLLVQLLCVAAI TCACLPPRSTP >gi|227860874|gb|ACLH01000046.1| GENE 5 6426 - 6623 351 65 aa, chain - ## HITS:1 COG:no KEGG:cauri_2352 NR:ns ## KEGG: cauri_2352 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 65 1 65 65 91 100.0 8e-18 MAFDSDSLNKRTLGPALGSAVVGVALGVVTILGIAQFSQADAVPNDNSVKASDAVMGGPE YGSRE >gi|227860874|gb|ACLH01000046.1| GENE 6 6655 - 7158 671 167 aa, chain - ## HITS:1 COG:Cgl2793 KEGG:ns NR:ns ## COG: Cgl2793 COG0589 # Protein_GI_number: 19554043 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 5 154 4 146 148 149 55.0 2e-36 MNNGETMLIAYDGSDRADRALEYAARLLRPTDVEILTAWEPSARQAARAVSRTGLHQSTV SPDSVEDDPAYEEALAICRQGIAKAETLGLRGHAHLVESVTTIQSAIVDAAQELDIDVIV TGTRALTGFRSLWNNSTAEYIVRNAGLPVFIVPPENDDEDDAAESDS >gi|227860874|gb|ACLH01000046.1| GENE 7 7217 - 8266 1087 349 aa, chain + ## HITS:1 COG:Cgl2792 KEGG:ns NR:ns ## COG: Cgl2792 COG1472 # Protein_GI_number: 19554042 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Corynebacterium glutamicum # 15 347 27 357 381 282 49.0 6e-76 MKKAMPALLLSAICALSACSTEPELSDAPPSETSAAASSDAAPQDAAPEDVRARAAAKLM PPALNYEDARAKLEAGVGGLFIPSWADPELLSDGPRGVNALREEMGRDFEVSIDFEGGRV QRFSEILGDYPSPQAMAEGHSPEEVEALATEIGHSLRAHGVTVDFAPVLDVDGGDLEVVG DRAFSTDPAAAGEYGAAFARGLQAAGVKAVFKHFPGHGRASGDTHLGEAVTPPLEELSGH EFVPFHTAIPQAPEAAIMMGHLVVPGLGEEPASLNPRAYQLAREELDFEGTIYTDDLGGM ASISENFSVPEAVAAALAAGADMPLWSTDEDINAVIDAAAEVVAQQERD >gi|227860874|gb|ACLH01000046.1| GENE 8 8301 - 9992 2055 563 aa, chain + ## HITS:1 COG:Cgl2791 KEGG:ns NR:ns ## COG: Cgl2791 COG2720 # Protein_GI_number: 19554041 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Corynebacterium glutamicum # 9 562 10 562 563 499 48.0 1e-141 MKKAIGHRQQRRKGLHVTLGVLVGLLLIAGIAYAWDVMANQHKVPRATSVGGVDISRMER TAAVEKLEQELGDVAAQPVDIRAGEKSSQLIPQDAGLSLNYQKAVDGIPDASLNPFSRLY SFIKPTQEIPVAVDVDEGQLSGELERVGNELKVEPEDGNLELIDGSLKETKPKLGQAVEE GELHEGVVKHWLDPEGVEVEPMVVEPQINDEAIEAMRTGDAARALDNPLTLKGENNTAGT LRKPEISQFVSIAAKDGELRLKVDKDRARELFQERMQGSEVPGTNAKISFSGNDKQITPS VDGSIIDWEKTFEGFEDRVSSEDDREWDADYKPDPADFTTEMAEKATFDETVSEFSTGGF SGASGTNIRLVAQQVNSAVVNPGETFSLNGYTGPRGTAQGYVESGIIIDGHAGTAVGGGI SQFATTLYNAAYFAGMEDVAHTPHSYYISRYPAGREATVYEGAIDLQFKNTSNHPVRIET DFGSDITVRFKGVKTVEVESINNGRWAKTEPQRKSVSEDCSPSSGAPGFTTSDTRVIKDL SGKEISRETTTTVYDPQPIVTCG >gi|227860874|gb|ACLH01000046.1| GENE 9 9996 - 11771 269 591 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 340 575 117 353 398 108 35 6e-23 MTRPMHTAVKDPADVDQLAQHPVKFGRVAGLFAPHRGTLLLVVTLIIATSGLTVVQPFLV RRTVDEAIPEHDTALLLWLVGGMLAITVVSQAIGVIQSFLSARVGHTIMHELRTQVFANL QRQSLQFFTNNRGGEIQSRLTNDIAAMRGMVTTTATSVASNLTMTVATLVAMVALSPTLS LLSLVVLPPAVWLTRRAAVLRRSLMEKNSRAQATLQQTISENLSVSGMRLAATLGAQERV YDGFEKTSRSLIRLELESQLAGRWRMALTQIIFGVMPALIYLVAGLRPGITIGTLIAFST LQTQIFRPITGLLNVGAQWVASMALFSRIFEYLDLEPELTEATQPAQLADASLTLHHVSY RYPGTDTDALSDVSLSIPAHTTTALVGHTGSGKSTVAALLARLADPTEGSVRLGGVDLRD IPPEQRAEVIGVVSQETYLIHGTVRENLLFAQPDASEEQMWAALNAARVDEVIAALPDGL DTLVGSRGYRFSGGEQQRLSLARTLLRQPQVLILDEATSALDNETERAIQEAVLGADATR LVIAHRLSTIRDADQIVVLDAGRVVERGTHAELLARDGAYAALLRAADEAS >gi|227860874|gb|ACLH01000046.1| GENE 10 11772 - 12458 29 228 aa, chain - ## HITS:1 COG:no KEGG:cauri_2347 NR:ns ## KEGG: cauri_2347 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 228 1 228 228 459 100.0 1e-128 MDAHHLANLANKFANDAKQLLDDCLPGPTIVAGEAFNSERKRFSFQLSKELKSKTSNAAP ALLEASYAMCENSSGKHLAVAASSFKICYRQSKKQPPIVRFEYERDAQNKPVSHFHFHSD SVALGLLLASTGQKDKAFQQQDIHSPMGGHRFRVCLEDVVELVIREFGIEAREGWEQHVI TGRKRFRESQKRAVIRSNPHLAVEVLCELGYDVPDIDHNGPTLAPAEW >gi|227860874|gb|ACLH01000046.1| GENE 11 12468 - 12656 161 62 aa, chain - ## HITS:1 COG:no KEGG:cauri_2346 NR:ns ## KEGG: cauri_2346 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 62 1 62 62 94 100.0 1e-18 MSAPIFTPRTTAELQKEREQLLQDLSPRTIDELRALRAIDEISIADEEILTRFEALAYVI GD >gi|227860874|gb|ACLH01000046.1| GENE 12 12619 - 12879 133 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASDGGGAKLYSDAQSALRRRSLMVELQLPKLLARVRFPSSAPFIYPAQAGFYFYSNTRV HCCIYATKHTERSPSVRAYIHSTNNR >gi|227860874|gb|ACLH01000046.1| GENE 13 12912 - 13484 747 190 aa, chain + ## HITS:1 COG:Cgl2789 KEGG:ns NR:ns ## COG: Cgl2789 COG0717 # Protein_GI_number: 19554039 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Corynebacterium glutamicum # 1 189 1 186 189 302 80.0 2e-82 MLLSDRDIRAAIAADAPERLSIEPFDAEMVQPSSIDVRLDKFFRVFNNSRYTHIDPKQEM PDLTSEVEVAEGDAFVLHPGEFVLGATLEKFTLPANLAGRLEGKSSLGRLGLLTHSTAGF IDPGFSGHITLELSNTANLPISLWPGMKVGQLAIFKMSSPAEAPYGSGVLGSKYQGQRGP TPSKSYLNFR >gi|227860874|gb|ACLH01000046.1| GENE 14 13538 - 14872 1825 444 aa, chain + ## HITS:1 COG:Cgl2788 KEGG:ns NR:ns ## COG: Cgl2788 COG1004 # Protein_GI_number: 19554038 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Corynebacterium glutamicum # 3 441 1 437 437 635 78.0 0 MRMTVIGTGYLGATHAACMAELDHEVLGVDVDEHKIAALKNGRVPFYEPGLPEVLERNIE SGRLGFSTSYDDAAEFANLHFLGVGTPQAHGSYAADLTYVKSVITELVPRLKGEHIIFGK STVPVGTAARLQEMADELAPEGASVEIAWNPEFLREGYAVKDTITPDRIVLGVGELAESN AEAVAREVYAQPLAQNTPFIVTDLQTAELVKVSANAFLATKISFINAVSEICEIAGADVV KLADAIGYDERIGRKFLGAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDAINMR RRDRVVDLAKQAFDGSVLGHRVTVLGCAFKPNSDDVRDSPALSVAGSLSLAGAAVTVYDP QGMENAKKVFPTLNYAASASAALKDSELVILATEWQEFRDLDPAEAGALVARRHIIDGRN VLSVDAWREAGWTVEALGRVLPAQ >gi|227860874|gb|ACLH01000046.1| GENE 15 14802 - 16028 946 408 aa, chain - ## HITS:1 COG:Cgl2787 KEGG:ns NR:ns ## COG: Cgl2787 COG5438 # Protein_GI_number: 19554037 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Corynebacterium glutamicum # 5 407 15 418 419 345 52.0 1e-94 MTNLSPWRTGLLGLLAITALATLAGLFILRPTSALTEHTSPDFSTTYALNHPQVEGTVET VDNHLCSDPHTGRAFDEAPLIPAEGDDTSCSRALIDLTSGADAGRKTQLVFYGVASDPTL HPGDEVILTVSSDGTYAFADFQRTGNLGLWAIIAAVIIIAFAAWHGLRALLGLGISLAIV FFYLIPSLIEGHSALPLALVTCAAILFLAVPLVHGVNWKSASALGGALVALALSGALGWA SISSTALTGSSSEDNLKLLLYMPGVSVVGVLLCGFIIGALGSLNDIAVAQASTVRELHAA DPTVGPGTLFTSAMKVGRDHIASMVYTIVLTYTGAALPLLMLITAAQRPALQILSSDLVA TEVLRSLLGAMALTLAVPLTTAIAAFTVPEGRDQAPRRSSRPRAKHRR >gi|227860874|gb|ACLH01000046.1| GENE 16 16141 - 17517 989 458 aa, chain + ## HITS:1 COG:no KEGG:cauri_2343 NR:ns ## KEGG: cauri_2343 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 458 1 458 458 792 100.0 0 MAGMNLVEAHLRSQAAGIELVAGIAGLSFEQLRAWGPESVARSLLALFDVYFAPTSFTRK QARAVSAARANGHDLPTLLLIERFAGRLKKQREAWDLRIELCGIAGDEKAVARYARKRIR ELNPPPAPKPGVTIRRGKELSKLTLTAPAALIEDLRPNIDEEDPVGSFTAAFREGRLARP VAQTLAVMELPEYATILGRLGDPSTPRPDSAAPAADGTPPTQPATTSTLRPDSTGAMPPT KSAAASSASDEPASDETFGHDISDPAAPDLGDIVIQLSNGAKITGQELIERELAEEGLVM LVDRVKGPVELHRTQRVASEKQRIMASGEQPTCAWDRCLCGADYSQIHHITEWRKGGETN PENLTPLCKYHNAINGLPGRGRIVREDGKIKWVPAGPRDPREPAHPHRAPRAQRIRENRQ ETVSTVASPSTSRRAQTAKPAESRTSTRSEPGSPAPPD >gi|227860874|gb|ACLH01000046.1| GENE 17 17612 - 18835 1475 407 aa, chain - ## HITS:1 COG:Cgl2785 KEGG:ns NR:ns ## COG: Cgl2785 COG0436 # Protein_GI_number: 19554035 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Corynebacterium glutamicum # 6 407 35 437 437 717 84.0 0 MTHNRIFDQSTKLQGVAYDIRGEVSTEAERMELDGHSILKLNTGNPAVFGFDAPDVIMRD MIAALPTSQGYSTSKGIIPARRAIVTRYELEDFPSFDVNDVYLGNGVSELISMVTQALLD DGDEVLIPAPDYPLWTAATSLAGGTPVHYLCDEEDDWNPSIEDIRAKVTEKTKAIVVINP NNPTGAVYSRETLQKIVDVAREYNLLILADEIYDRILYDGAKHISIASLAPDLLTITFNG LSKAYRVAGYRAGWMVLTGPKSHARGFIEGLDLLAGTRLCPNVPAQHAIQVALGGRQSIY ELTGEGGRLLKQRNIAYEKLNEIPGVSVVKPMGALYCFPRLDPEVYEIHDDSKLMLDILR AEKILMVQGTGFNWPTPDHFRVVTLPWASQLENAIERLGNFLVSYRQ >gi|227860874|gb|ACLH01000046.1| GENE 18 18846 - 19457 783 203 aa, chain - ## HITS:1 COG:no KEGG:cauri_2341 NR:ns ## KEGG: cauri_2341 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 7 203 1 197 197 333 100.0 4e-90 MTNPFSMRLSDAERTDAVNDLAQALGEGRLTMDEFEERTDAVMQATTRRELAEVFMDIPT KASSELKIYSQGEVARAYQSTRKPRLATAMVGSLGLLFGAIASFGALSGVTAALTGTGLL FLIPALWIMLYVAKVGPESWHQPSPRQIERQRMRELKAAGAEERAQMRALEQAQWAERRR QASEITGDAMNLAKRKLEQWNQK >gi|227860874|gb|ACLH01000046.1| GENE 19 19477 - 20694 1530 405 aa, chain - ## HITS:1 COG:BS_yjbQ_1 KEGG:ns NR:ns ## COG: BS_yjbQ_1 COG0475 # Protein_GI_number: 16078229 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 19 301 5 297 400 79 25.0 8e-15 MQTDVTYVLASGETNYTNSLVSFAWIMAVALLAPLVSHALGKKMPAVALLIFFGMLIGPS MLGLAHEDPGIGMLKELGVGALFLLAGFEIDLASLKSKEAATGLSTWLICMVVCGVGAYF LMDDIPGAIVMAIALTSTALGTITPMLKQDKLLGTRVGDSVVIHGAIGEVAPITAMALLL GTRSTWTTMLILLAFIAIAVAVAIMPFAITTLMPWFKDAFISGAGSTNQTIMRLIILILA ILMAVTAVFELDIVLGAFAAGIILNRIVPDEFHKGLENRLDVVFYSMLIPVFFVVSGMAI DWKVIVNEPLKVLGIPLLILVTRGLPVFLRENIHQTGSDVETTRERIQVALYAATGLPII VAVMTLAVDSGIVDSEIASIFIAGGALTVAIFPFLSGLVREKAEE >gi|227860874|gb|ACLH01000046.1| GENE 20 20764 - 23397 2323 877 aa, chain - ## HITS:1 COG:ML2501 KEGG:ns NR:ns ## COG: ML2501 COG0247 # Protein_GI_number: 15828353 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Mycobacterium leprae # 5 785 11 864 880 509 38.0 1e-144 MFGWVAIAASVPVWLYFFYRLTALFRFIRSGGPTQLNRTDRPLARLGRVLIEVFGHTHFK GRPLVNAAHWLVMVGFLFGAIVWFEAYIQTFAPDKGWPWLSDWPVYHFIEEVLAIGTVLG ICFLIGVRLKLGHTERGSRFYNSQVFPARLVEAIVLLEGLGMLAVKASAIATYGGGSPWA DFLTMRVAGVMQASPSMVQFFALVKLLTGLVFIACIARYFQWGVMWHRFMAFFNIFFQRN ADGEKALGAVPTPDLEDLEPGSWKMLLDASSCTECGRCQDLCPAWNTEKPLSPKKLMMDL RQGALDNYNPHEGLNVLAMAGTIDDDVLWACTNCGACVDQCPVDIEHIDHVADLRRFKVL AESDFPSELTGLFKNMETKGNPWGRNASERRAWIDEARADGIEVPIIGEDAEDFSDLEYL FWVGCAGTYDDKGRATTRAVVDMLHTAGVKFGVLATGETCTGDPARRAGNEFLFQVMAEQ NVATLNDAFAGVPKGQRKIITTCPHCFNTIRNEYPDFDGHFDVLHHTQLLNRLVREKLLV PVPRSPEDRKPVTYHDPCFLGRHNKVFDPPRELVEATGASLAEMDHNRDEAFCCGAGGAR MFIEEKLGKRINEFRSEQAVATGAEQIATGCPFCNVMLTGGVKSIAPETQVSDVALMLRS AIAPSGDLPAPREKAFLDTPRRLPVEDSDVPSPEATAAQSAPTSSPQAPTAAPSAPSAAS APQAPAAPTPPAAPSAPAAPTAPQAPSAPTVPTAPAVPSTPSAPAAPSTPQVPAAPTAPA APTAPSAPQAPAAPSAPAAPSTPKPLTAPSAPAAPKAPAAPSAPAAPKAPAAPSAPAAPK APAAPSAPQAPSVPDAPAAPSAPAAPKAPGASASKGD >gi|227860874|gb|ACLH01000046.1| GENE 21 23507 - 25450 203 647 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 410 632 132 354 398 82 28 3e-15 MTEQDNATLSEDTTAEIEEKTGENAPRKAKNFWPSAKRLFGLLAPFKAQLWAIAAMNIIC VFLAVAAPKVMGMATDVIFSGVISRQLPAGMTKEQAIAALRAGGQDKFADMASAMDLNPG FGIDFSKLGTIIGIVIAMYVVSSLFQWWQGFLLNSLVMKVVFDLRESIEAKLNRLPLNYF DTQSRGDLLSRTTNDADNIQSALQQAISQLFYNLLMVIGITVMMFTVSWQLALVALLALP LTAVVIAVIGSRAQKQFKAQWKATGDLNGQVEEAFSGHDLATVFGRIESMTEDFDKRNEE LFRSASLAQFLAGMMMPIMQFISYLSYVVIAVLGALKVASGNLTLGGAQAFIQYSREFNQ PLGQLGGMMQQVQSGVASAERVFEFLDAEEEPAEEPTSRLGGRAKGLVEFTDVDFSYDPD KPLIQDLSLRVEPGQTAAIVGPTGAGKTTLVNLIMRFYDIDSGTIRLDGVDTAEISRHEL RSQVGMVLQDAVVFEGTIMDNIRYGRLDATDEEVIAAAKATYVDRFVHSLPDGYDTKIDQ DGGAISAGERQLITIARAFLAQPALLILDEATSSVDTRTEVLVQQAMNALRADRTSFIIA HRLSTIRDADLIIVMEEGRIVEQGTHAELLDAHGAYWGLHQSQFRED >gi|227860874|gb|ACLH01000046.1| GENE 22 25451 - 27169 168 572 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 334 560 1 234 245 69 25 3e-11 MELVRILLSRSKPYTGYVIAVLLLQALSTAATLYLPSLNAQIIDKGVAQVDIDCIWRTGG IMLIVAFVQVLAAIAAIWFGSRTAMGLGRDLRSEVFRRVTRYSAEDMSNFGTATLITRGT NDVQQVQMVYMMMLNFMVAAPIMSIGGIIMAIREDAGMSWLVAVSVIVLLAAISAIIVRL MPLFRAWQGKLDVMNGTLREQIAGIRVVRAFTREEHESERFRTANRDLTNLSLKVGQLFI LMFPIITVILNVATGAVLWFGGHRVDEGLVEVGSLTAFLQYLLQILAAVMMGTFMAMMLP RAIICARRITDVLEHDPSIVEPANPLTPERSEGVVEFDNVSFQYAGAEAPVLHDVSFTAT PGTTTALIGATGSGKTTALSLIPRLYLPTKGRVLLDGTDIADMARGDVVKRVGLVPQKPY LFSGTVASNLRLGAPEATDEKLWNALRVAQADFVEDLDMHISQGGTNVSGGQRQRLSIAR MLVARPLVYLFDDSFSALDVLTDAAVRSGMREYTAEATTIIVAQRVSSIVDADQILVMDA GRVVARGRHEELLESSETYREIVESQKTSEVA >gi|227860874|gb|ACLH01000046.1| GENE 23 27370 - 27786 420 138 aa, chain - ## HITS:1 COG:no KEGG:cauri_2336 NR:ns ## KEGG: cauri_2336 # Name: trmFO # Def: methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase (EC:2.1.1.74) # Organism: C.aurimucosum # Pathway: not_defined # 1 138 1 138 138 266 100.0 2e-70 MQRVAIVGDSPAALSTAERLIRAGLCVDLYCERPAPFGLLRRFAGLSGAESAPAPCPQGT TPRLRLIGNVRVGYGPDADINHSDLNQLSASGDRHLVLLELMARGVAITTWEGLCQPTDD VEDWAAVTAQAQRAPVCF >gi|227860874|gb|ACLH01000046.1| GENE 24 27949 - 28731 887 260 aa, chain + ## HITS:1 COG:Cgl2755 KEGG:ns NR:ns ## COG: Cgl2755 COG0175 # Protein_GI_number: 19554005 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Corynebacterium glutamicum # 7 259 9 260 261 300 62.0 1e-81 MTEPINLLDRGDYRDPSISPEGTRDTAPLEPAVAQRNQELVEEWADKLYDASAETITEWA AEHAPGRLAVTMSMENTVLAELAHRAHLDADLLFIDTGWHFPETLEVAGDVAKRYADLPL VTVLPLLSPEEQDKIYGPRLYARDVAAYNRMRKVEPLNMAMDPYVGWVTGLRRADSEHRA SAPALSLDRTGRLKISPIITWDLDDTDAYIKEHDLIIHPLTLQGYRSIGCAPLTFPVGEG EDARSGRVFADGKTECGLHE >gi|227860874|gb|ACLH01000046.1| GENE 25 28731 - 29627 1181 298 aa, chain + ## HITS:1 COG:Cgl2754 KEGG:ns NR:ns ## COG: Cgl2754 COG0175 # Protein_GI_number: 19554004 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Corynebacterium glutamicum # 3 298 9 304 304 505 83.0 1e-143 MTLSPHLKDLENESLHILREVAGQFDKVGLLFSGGKDSVVVFELARRAFAPATVPFELIH VDTGHNFPEVIDFRDQLVAETGARLHVAHVQDWIDRGDLQERPDGTRNPLQSVPLVETIA ERGYDAVLGGARRDEERARAKERIFSIRDSFGGWDPRRQRPELWDLYNGGKMAGENVRVF PISNWTESDIWEYIGARNLQLPSIYYSHQREVFNRNGMWLTPGEWGGPREDEPLETRTVR YRTVGDMSCTGAVESTAASPDEVLAEISISTLSERGATRADDKLSESAMEDRKKEGYF >gi|227860874|gb|ACLH01000046.1| GENE 26 29627 - 30919 1738 430 aa, chain + ## HITS:1 COG:Cgl2753 KEGG:ns NR:ns ## COG: Cgl2753 COG2895 # Protein_GI_number: 19554003 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Corynebacterium glutamicum # 12 430 13 428 433 558 72.0 1e-159 MTTTLAPNVGALKQRDTLRLCTAGSVDDGKSTFVGRLLYDTKSVLADQVESMERSSADRG FDGMDLSLLVDGLRAEREQGITIDVAYRYFATDKRTFILADTPGHVQYTRNTVTGMSTSQ VVVLLVDARNGVVEQTRRHLNVAALLGVRHVILGVNKIDLVDYDEQVFRDIESEFNEVAA RLSITDSVAIPISALKGDNVVERSTTMDWYEGPTVLETLETVPVVTGRADDLDLRFPIQY VIREHASDYRGYAGRVKAGHVAVGDEVTLPGGHTSAVTAIDTTDGPLGSDEAARAGDSVV LRLADDIDLARGDLIAGSQRPEEVREFAATAVVLTDKELRAGQMVKLRYGTALVKARVAS VERILDLDGVADVEAPESAALNDIAFITVQTQAELPVEDYAARGAVGNFLLIDQSSGNTL AAGFVGQRLR >gi|227860874|gb|ACLH01000046.1| GENE 27 30964 - 31587 781 207 aa, chain - ## HITS:1 COG:no KEGG:cauri_2332 NR:ns ## KEGG: cauri_2332 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 207 1 207 207 396 100.0 1e-109 MAHYNLYSSLNLDPSADSATLASEIERRLSTTDQSNAALYDELSTAHSIFSRRDRREQYD RAIADPFGPEVDVARIREIATSGSGVQLMPQPSSAQASGSSNFNIDFSFPVEPSRQRAQS IQWCIVWGLLAFMWIISTIRGLGALAEVGNASGVELLYGADDYVDEASSAGAFFFMVAGG TPVYLMISEFIWSLRKTLGRKQVEKNA >gi|227860874|gb|ACLH01000046.1| GENE 28 31623 - 32477 558 284 aa, chain - ## HITS:1 COG:no KEGG:cauri_2331 NR:ns ## KEGG: cauri_2331 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 284 1 284 284 509 100.0 1e-143 MTNNNPWAPPSNEGPERPARSGSILIIALIVLLAVIAGVTWFLMSRSSSEPTEHEARFTQ VAPTSAESGSTNSKTLTTSVETSTTKPVTSKNTSQDRCGAAAEEIRNDIPRPMTLLCNDE WLYLATENSSSFYLFTWGGAEWTPYKNDGVDDTTSVKCWDADRLKADNAPTQITGDIPLC ADSTENIEAQETCDGRYILIVDSLLVPYGESPQSEIDRVKSHYAEVNIMPGTACSSLRSE HEGKQVYAAYYDAGHSVDEVCKLKARYGGNARSLNNDADFSDPC >gi|227860874|gb|ACLH01000046.1| GENE 29 32569 - 33180 629 203 aa, chain - ## HITS:1 COG:no KEGG:cauri_2330 NR:ns ## KEGG: cauri_2330 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 203 1 203 203 349 100.0 4e-95 MLRSASALAGAALMCLPLAACSQVEQGEADTPMFSAVRNSPTSVAAESPTEEAASPEPTS NQSPASKTEEPESCEDIDAEEAYQSGIGTIAPWNGFGWGRPSSSEFDPCADLSWLIIAIE GATASSPHHIMLFHKGEYLGTATAEPYGFFPTIERVNDAEIAVTYHWAREGETTAGRTGE THAGFRWDEGQQKVIMNGDVPPV >gi|227860874|gb|ACLH01000046.1| GENE 30 33237 - 33725 468 162 aa, chain - ## HITS:1 COG:no KEGG:cauri_2329 NR:ns ## KEGG: cauri_2329 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 162 1 162 162 313 100.0 2e-84 MFTPRVFAGAALLCMPLIACTTPEEAQASPVVCEAGNVQAAFDKNVAQVPQWHGHEWALV DSSHFDPCAALSWQTISIEGATASSPHHIMLFHYGEYLGTATAEPYGFFPDVEQVNGNEI SVTYHWPQEGDANAAPTGTSKANFRWDEAQNKVIMSGDVPPS >gi|227860874|gb|ACLH01000046.1| GENE 31 33837 - 34415 728 192 aa, chain + ## HITS:1 COG:Cgl2742 KEGG:ns NR:ns ## COG: Cgl2742 COG0775 # Protein_GI_number: 19553992 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Corynebacterium glutamicum # 8 185 4 181 186 170 52.0 2e-42 MENLSDRTLFVAAVDAEATHVPEGVPLLITGIGTVPAAIELTNALASAEVLPDRVINIGT AGALRDDLSGVFEISHVRKHDFHLEVLSDVSRYLLPEVIELETSGKLPTATLATGDAFIS DTPTRTRLAQDSALCDMEGYAIAAVCQKFGVPCTLLKQVSDTANEESYGSWASVLDRAAE ELAAAFGTVSAD >gi|227860874|gb|ACLH01000046.1| GENE 32 34551 - 35786 1371 411 aa, chain - ## HITS:1 COG:Cgl2741 KEGG:ns NR:ns ## COG: Cgl2741 COG0628 # Protein_GI_number: 19553991 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 27 411 71 455 476 390 58.0 1e-108 MSTTHDEDKPQAASSSDEEAALPVSKTDDKSRVLGRDAISLAKVCLVFIIVVAGVGLAGY LLKFIWVGLLPVILAILVCTVLFPVTNWLRAHKFPRALASITTLLGFLAIIGGVFAAMAP VVSSQGASLVSQAEGGLNKLVDMAKDLPFEIDAAKVQEVLDDAMTFIKGQASNIATGVIS GVSMASSIAMELAIMLFVAFFILKDGDKFLPWLRTYTGYSAGWHATELLTRVWNTLSGFI QAQAAVAAVDGLLIGLGLWALQVPLALVIGVVTFFASFIPVIGAVTAGALAVIIALVSDG LTKALLALALIIIVQQVEGNVLQPMLQSKAMGLHAAMVLLSVTVGSALAGIIGAFLAVPV AATIAVVFRYHQEMASLRAGEIDTEDIKIATSEGHEDVKELYEKLEASGAR >gi|227860874|gb|ACLH01000046.1| GENE 33 35822 - 37585 2191 587 aa, chain - ## HITS:1 COG:Cgl0099_2 KEGG:ns NR:ns ## COG: Cgl0099_2 COG1012 # Protein_GI_number: 19551349 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 1 577 174 748 763 504 50.0 1e-142 GEFISVAAYEANKTVTQTDPEISEAIDFCTYYAQSARLLESYAAEFTPHRVTVVTPPWNF PVAIPTGGIAAALAAGSAIIIKPAPQVVHCAKLVVEAFRAGLEAQGLDPDLVQLVFTDEG DAGRALISHADVDAVILTGASDTGKLFRSWKPELNIMAETSGKNALIITPSADPDLAIQD LYLSAFGHSGQKCSASSLVIFVGAAGESQRLRSQLVDAVKTLITGPGYEITTTMNGLAEA PGEKLLRGLTQLEPGEKWLVKPEKLNEEGTLWSPGIRDNVRPGSWFHVNECFGPVLGIMH AETLEEAIEWQNSTGYGLTGGIHTLDNDEIDYWLERVEVGNAYVNRGITGAIVQRQSFGG WKQSVMGPGAKAGGPNYVAQFGTWSEGPLRPFDVDISQPVAAQLRAFGELGFSEEDTAWL WRAAELDELAWQQEFGRQHDRAGLVCEANVFRYRPVLTPLQVRIASDAALRDVSRLALAA TRTGSPVRFSAAPEKAAELRGLGFKVDSVSADAFAREVAGLESGRVRAVGSVEPGIFEAA VESNSVVLNQPVLADGRRELLPFLLEQAVSVTMHRFGIIRQVSSIRA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:28:02 2011 Seq name: gi|227860873|gb|ACLH01000047.1| Corynebacterium aurimucosum ATCC 700975 contig00109, whole genome shotgun sequence Length of sequence - 41928 bp Number of predicted genes - 36, with homology - 36 Number of transcription units - 23, operones - 9 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1582 2297 ## COG0506 Proline dehydrogenase 2 2 Tu 1 . - CDS 1985 - 3097 957 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 3057 - 3116 2.5 3 3 Op 1 8/0.000 + CDS 3163 - 4188 403 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 4 3 Op 2 7/0.000 + CDS 4191 - 5192 277 ## COG4779 ABC-type enterobactin transport system, permease component 5 3 Op 3 . + CDS 5195 - 5992 265 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 6099 - 6143 1.1 + Prom 6020 - 6079 3.5 6 4 Op 1 29/0.000 + CDS 6222 - 8066 2978 ## COG0443 Molecular chaperone 7 4 Op 2 5/0.333 + CDS 8070 - 8735 1056 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 8745 - 8790 8.1 + Prom 8768 - 8827 3.1 8 5 Op 1 4/0.333 + CDS 8869 - 10074 904 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 9 5 Op 2 . + CDS 10087 - 10509 389 ## COG0789 Predicted transcriptional regulators + Term 10516 - 10546 1.0 + Prom 10701 - 10760 2.2 10 6 Tu 1 . + CDS 10847 - 12367 2272 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 12425 - 12458 6.1 11 7 Op 1 . - CDS 12399 - 13550 885 ## cauri_2316 hypothetical protein 12 7 Op 2 . - CDS 13547 - 13807 88 ## cauri_2315 hypothetical protein 13 8 Tu 1 . + CDS 13901 - 14719 908 ## COG0388 Predicted amidohydrolase 14 9 Tu 1 . - CDS 14752 - 15951 1024 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases + Prom 15990 - 16049 1.6 15 10 Tu 1 . + CDS 16120 - 17490 1859 ## COG0786 Na+/glutamate symporter + Term 17510 - 17550 9.2 + Prom 17613 - 17672 3.5 16 11 Tu 1 . + CDS 17696 - 19099 1666 ## cauri_2311 hypothetical protein + Term 19112 - 19167 9.4 17 12 Op 1 . + CDS 19361 - 21922 1876 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 21937 - 21984 7.6 18 12 Op 2 . + CDS 22018 - 22869 1033 ## COG2897 Rhodanese-related sulfurtransferase 19 12 Op 3 . + CDS 22934 - 24181 1300 ## cauri_2308 putative secreted protein + Prom 24226 - 24285 2.4 20 13 Op 1 2/0.333 + CDS 24330 - 24875 875 ## COG0461 Orotate phosphoribosyltransferase 21 13 Op 2 1/0.667 + CDS 24868 - 25542 412 ## COG0566 rRNA methylases 22 14 Tu 1 1/0.667 + CDS 25606 - 26805 1112 ## COG4833 Predicted glycosyl hydrolase + Term 26812 - 26843 -1.0 23 15 Tu 1 . + CDS 26988 - 28022 1702 ## COG0191 Fructose/tagatose bisphosphate aldolase + Prom 28381 - 28440 1.6 24 16 Tu 1 . + CDS 28528 - 29430 232 ## COG2207 AraC-type DNA-binding domain-containing proteins 25 17 Op 1 11/0.000 + CDS 29556 - 30590 854 ## COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 26 17 Op 2 3/0.333 + CDS 30621 - 31262 579 ## COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 27 17 Op 3 . + CDS 31259 - 32758 1177 ## COG0471 Di- and tricarboxylate transporters 28 17 Op 4 . + CDS 32803 - 34017 1423 ## COG4129 Predicted membrane protein 29 18 Tu 1 . - CDS 34060 - 34668 117 ## cauri_2298 hypothetical protein 30 19 Tu 1 . - CDS 34892 - 35152 317 ## pREC1_0019 hypothetical protein 31 20 Tu 1 . - CDS 35375 - 36295 747 ## cauri_2297 hypothetical protein - Prom 36384 - 36443 2.2 + Prom 36282 - 36341 1.9 32 21 Tu 1 . + CDS 36485 - 37576 1005 ## cauri_2296 putative secreted protein + Prom 37632 - 37691 1.9 33 22 Op 1 . + CDS 37726 - 39018 1967 ## COG0104 Adenylosuccinate synthase + Term 39044 - 39102 3.2 34 22 Op 2 . + CDS 39192 - 40538 1320 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Term 40613 - 40658 9.1 + Prom 41064 - 41123 3.0 35 23 Op 1 . + CDS 41187 - 41609 307 ## cauri_2293 hypothetical protein 36 23 Op 2 . + CDS 41603 - 41927 160 ## cauri_2292 hypothetical protein Predicted protein(s) >gi|227860873|gb|ACLH01000047.1| GENE 1 1 - 1582 2297 527 aa, chain - ## HITS:1 COG:Cgl0099_1 KEGG:ns NR:ns ## COG: Cgl0099_1 COG0506 # Protein_GI_number: 19551349 # Func_class: E Amino acid transport and metabolism # Function: Proline dehydrogenase # Organism: Corynebacterium glutamicum # 17 388 11 384 389 313 45.0 5e-85 MTNDAHTPVPESTDIDAALIDAAAAQAHSWLASTADEQDPATEQLADLLRNPDGVAFTMD FVDRVMRPEDDKVAAHALKSVTTTYDASFLGLINGSLVGLGGFFGPILPNLVMPLARMRM RQMVGHLVLDAESDALNKTLDKAAESGEQLNLNLLGEAVLGDDEARSRAERTLKLIKNPR VTYVSVKASSMVAQLNPWDIEGSLVRLKERLRPLYEAAARRPDKVFINLDMEEYHDLHLT VRLFTELLSEPEFTNLEAGIVLQAYLPDTFDALAHLAEFAKQRVAEGGSHIKIRIVKGAN LSMEHVQGEIHGWPAAPYATKDEVDANYYRLLDYILRPEFADCVRIGVATHNLYTAAFAY KLGTKRGVMRMMDSEMLQGMSPAQQTAVREAFEGRQILYTPVVHMEDFDVAVSYLVRRLE ENSAPQNFLYALFAPEEQALKDQEQVFREAVEQRWDTFAGPRRTQNRLEEAEQAAGRQAP RTGRFANEPDTDPALEANREWALKALATDPGEHGVEEVTETVVVDKH >gi|227860873|gb|ACLH01000047.1| GENE 2 1985 - 3097 957 370 aa, chain - ## HITS:1 COG:Cgl3014 KEGG:ns NR:ns ## COG: Cgl3014 COG0614 # Protein_GI_number: 19554264 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 50 368 27 340 342 322 49.0 8e-88 MYIRKKIVPRTPLLRLTAVGLTAAIALTGCASLENTNSNADASNPASSPSGKESGNSNSA SGNDSVATGGEGFAGAGEKSQSFGSDAAPGQFPRTVTHARGTTELKEKPQRVVVLESGEL DSVLALGMKPVGMTTSKGQNPVPDYMADKASDIETVGTINEVNMEKIASLNPDLIIGSQL RMDKYYDQFNSISPTVFSIRPGYTWKENFRLIGEALGEEVRTEQVMADYDKKIEEVKKAI KDGPASEDTTVTILRFMPGKVRLYGRLSLIGTVLDDAGLARPANQDIEELATEISPENID QADADYIFYCSYGDPAATGQDTAIATEAFQQLPAVKDGHAIEVSDDTWALGLGPLGAQKI AADLAEYLSH >gi|227860873|gb|ACLH01000047.1| GENE 3 3163 - 4188 403 341 aa, chain + ## HITS:1 COG:Cgl0493 KEGG:ns NR:ns ## COG: Cgl0493 COG0609 # Protein_GI_number: 19551743 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 12 336 16 342 348 180 41.0 4e-45 MLVIEQGVYAGKGSARRLGWLVVAGIAILGIGVALSLALGARSIPFSDVLAALRGQPGIA SSIVWERRLPRTLVAVCAGCALALAGAVLQIMTRNPLADTGVFGINVGASLAAAIALGWW GWQSPFAFSLAAIIGAAVTMLVVTAVGRGRAGDVDPLRLILAGVAIGAVCEGLSSALILI DPHSFARIRAWVTGSVDVASWTPVAITSGGLAVGVVLLIVFARHLPPLALGDEAAASLGI NLKMTRLGLIAAVTVLAATATAAAGVIVFVGLVIPHVVRLCGIYEERAQLAASAVVGPLF LLGADIVGRFLIAAELPAGVAVSLIGAPVLIALSHRAGRRL >gi|227860873|gb|ACLH01000047.1| GENE 4 4191 - 5192 277 333 aa, chain + ## HITS:1 COG:fepG KEGG:ns NR:ns ## COG: fepG COG4779 # Protein_GI_number: 16128572 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli K12 # 52 326 54 328 330 177 48.0 2e-44 MSVRSVLSFAGIVIVALAIAAYSLFSPGAGQDSAALWSVATNPNSTDFAATVVWQWRAPR VVAAIVVGMCLGIAGAIFQILTHNPLGSPDIIGFNTGAYTGVIAVSLAGFSSAFNIALGA LVGGTVTALLIMGLSFAGRLTGARLIVVGIGVTFFLSAINKWLILSGELEQSLGAATWAA GTLNAVSWGYVIPLGVLGGVACVAGLLLRGWCDALALGDSTASSLGLNVNRARVVMVLVG TVLVAVSTAIAGPISFIALAAPHMARLLSRPGRTPVLASGVLGALFLLAADLAGQRLFFP ITLPAGLVTVCAGGIYLAGLLLWQSRFARVKGR >gi|227860873|gb|ACLH01000047.1| GENE 5 5195 - 5992 265 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 13 238 2 228 245 106 29 2e-22 MNEQKVCDGAPGVRAERLSMSYGRTAPLILDSVDVSFPAGKFSAIIGPNGCGKSTLVKVL ARLETPSAGAVHIGQEDAALLSRRKYAQRVAVMSQQSVAPEGINVRELVARGRFAHQGFM GWRSQEDERAVSRALAEVGLEELEEAEVPALSGGQRQRAWLAMALAQETPVLFLDEPTSA LDIGYQHSFMKLMKELAGSKTLVAVIHDLAHVLRYADYVVAMKDGTVWDAGAPRDVINPA LIEDLYGLAVRVVNADGEPAIVPVG >gi|227860873|gb|ACLH01000047.1| GENE 6 6222 - 8066 2978 614 aa, chain + ## HITS:1 COG:Cgl2740 KEGG:ns NR:ns ## COG: Cgl2740 COG0443 # Protein_GI_number: 19553990 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 1 608 1 609 618 905 86.0 0 MGRAVGIDLGTTNSVVSVLEGGEATVIANSEGSRTTPSVVAFAKNGEILVGQSAKNQAVT NVDRTIRSVKRHIGTDWTIDIDDKKYTPQEISARTLMKLKRDAEAYLGEDVTDAVITVPA YFEDSQRQATKEAGQIAGLNVLRIVNEPTAAALAYGLEKGEQEQTILVFDLGGGTFDVSL LEIGDGVVEVMATAGDNALGGDDWDQRIVDWLVDKFKASQGVDLTKDKRAVQRLREAAEK AKIELSSSQSANINLPYITVDSEKNPLFLDETLSRTEFQKITQDLLDRTKTPFNQVIKDA GLSLSEVDHVVLVGGSTRMPAVSDLVKEMTGKDPNKGVNPDEVVAVGAALQAGVLRGEVK DVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKKSETFTTADDNQPSVQIQVYQGEREM ASANKLLGSFELGGIAPAPRGVPQIEVTFDIDANGIVSVSAKDKATGKENTIKIQDGSGL SQEEIDRMVKDAEAHAEEDKKRREEQETRNQAESTSYQTRKFMDENSDKLPEDLKTRVTE AADAVDEALKGDDIEAIKSAVEKLGTESQELGKALYEAQAAEAGAEGAAAGEAAGDPNVV DAEVVDEDDENKEK >gi|227860873|gb|ACLH01000047.1| GENE 7 8070 - 8735 1056 221 aa, chain + ## HITS:1 COG:Cgl2739 KEGG:ns NR:ns ## COG: Cgl2739 COG0576 # Protein_GI_number: 19553989 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Corynebacterium glutamicum # 4 207 8 218 218 163 56.0 3e-40 MTSPQDPGNPANTDPEATSAEAAEAAAAEAASADGVVDDATAGTAEAEAAVEDAARDIAD EDASAENSLEAQLAERTEDLQRLNAEYTNYRRRTERDRQAVIETAKAKVLADFLPILDDL ELARQHGDLNEGPLKAIADKLTGVLTNNQLTPFGAEGDAFDPEVHEAVQDLSTGDEQVVG TVLRRGYTVGERVVRTAMVIIADPAESADTAESPDSSDSAE >gi|227860873|gb|ACLH01000047.1| GENE 8 8869 - 10074 904 401 aa, chain + ## HITS:1 COG:Cgl2738 KEGG:ns NR:ns ## COG: Cgl2738 COG0484 # Protein_GI_number: 19553988 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Corynebacterium glutamicum # 6 396 5 392 395 446 64.0 1e-125 MNAKPEWADKDYYADLGVSSSATAEEIKQAYRKLARKNHPDANPDNPAAAEKFKQVAEAY DVLSDKATRKDYDQFKAMMRGGGFGRRGGAGFPGGFRSTHMGGPGAQEFDLSDIFGGSAR GASQGGGLGDIFGGVFNRGGGAGHAARPSRGADVETQITLDFREAAKGTTIPLQLSGEAP CTTCHGSGSKSGKLTTCSTCDGTGFTSEQRGTFGFSAPCADCDGTGQRAEDPCPDCSGSG TVHRTRSITVRIPAGVIDGQKVRLAGQGEAGPNGTPSGDLFVAVTVKPDKVFTREGDDLH VTVPVSFAELALGDTITVPTLDSPVRVKVPAGTPDGRTLRVKGRGVAKRGGKAGDLMVTV QVTVPSTLDAAASSALRSYAQAEKDSGFDPRAGWAGNTVAR >gi|227860873|gb|ACLH01000047.1| GENE 9 10087 - 10509 389 140 aa, chain + ## HITS:1 COG:Cgl2737 KEGG:ns NR:ns ## COG: Cgl2737 COG0789 # Protein_GI_number: 19553987 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 17 138 23 146 146 135 66.0 2e-32 MSKDRTNRSDTAQPKAMYVISVAAELSGMHAQTLRTYDRMGLVSPARTSGGGRRYSESDI ELLRKIQTLSQDDGVNLAGIKSIIELTAERDRLAAERDELQAEVERLRSQGRPSRGELVH VPRSTSVVMWTPRRNRRRDS >gi|227860873|gb|ACLH01000047.1| GENE 10 10847 - 12367 2272 506 aa, chain + ## HITS:1 COG:Cgl2736 KEGG:ns NR:ns ## COG: Cgl2736 COG1012 # Protein_GI_number: 19553986 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Corynebacterium glutamicum # 1 506 36 541 541 839 79.0 0 MTLYANPGTPDAIVNFRERYDNYIGGEWVPPVDGEYMDNITPVTGEVFCQVARGKEADIN LAIDAAEKAFETFGKTTPAERALLLHRIADRIEENLEKIAVAETWENGKAVRETLAADIP LAVDHFRYFAGAIRAQEGRLSQIDQDTVAYHFHEPLGVVGQIIPWNFPLLMAAWKIAPAL AAGNTIVMKPAEQTPASILLLIEIIEDLLPKGVLNIVNGVGEEAGVALSTSDRIAKIAFT GSTPVGKIINKAAADKVIPVTLELGGKSPSIFFADIMDKDDTYLEKCVEGFVMFALNQGE VCTCPSRALIHEDIADKFLEMAVERVKKIKIGHPLDTETMMGAQASQEQMDKITEYLEVG PKEGAETLVGGHVNKVEGLENGYYIEPTVFRGTNDMRIFREEIFGPVLSVATFKDFEEAI QIANDTNFGLGAGVWSRHQNTCYRAGREIQAGRVWVNHYHVYPAHSAFGGYKESGIGREN HLMMLSHYQETKNMLVSYSEEQAGLF >gi|227860873|gb|ACLH01000047.1| GENE 11 12399 - 13550 885 383 aa, chain - ## HITS:1 COG:no KEGG:cauri_2316 NR:ns ## KEGG: cauri_2316 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 383 1 383 383 638 100.0 0 MSASAALRAEAERMENSASELEVYISDSHHHWADLALFGAAADAARSALQRATDTLLEPA QQMSLAARILSLYAPLQERIEQLRARALQLAAIPAFAEPASVALGQLDALADVLDWACAR QLNALCTPEMAQPPSRLEDFSDLTLAELHAVQLTMASEEVRSLVAANPDITLLEASPGRL VALVDPEGIGTQAAQVSTFVGGVGSSDAASWPTAVERARAIARATSGPTVAWIGYSAPSS LARAAHEDPARRGATELGRFQRALRQRFPHAQHILLGYSYGSVVVGKAAQQDYVADDIVL VGSPGASVGAASQLHGRVWSARNTEDPIAVATGPRGGIHGPDPSSSAFGATPLPGASGLP GDHGSYWKDPAFLRGLGIIAQRF >gi|227860873|gb|ACLH01000047.1| GENE 12 13547 - 13807 88 86 aa, chain - ## HITS:1 COG:no KEGG:cauri_2315 NR:ns ## KEGG: cauri_2315 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 139 100.0 5e-32 MNHLDIDQAALPQIRSLFDHASPTVSPSLLEPPRTARALALLGARWEDARRASERSRKAR LEELESFVGVTQGFDSELSARLEGSE >gi|227860873|gb|ACLH01000047.1| GENE 13 13901 - 14719 908 272 aa, chain + ## HITS:1 COG:Cgl2733 KEGG:ns NR:ns ## COG: Cgl2733 COG0388 # Protein_GI_number: 19553983 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Corynebacterium glutamicum # 4 270 1 266 266 321 60.0 8e-88 MGRMKVAAVQLTSTGNVEENLAVALDKIREAADNGAQLIVLPEATTQSFDSGRLDTNAEG LDGPTATAVRALAEELGVYVVLGMFAPADTVQRGEKTINRVANVALIAGPGVLGGYEKIH TYDAFKYKESDTVRPGESLVAFDAGDLTVGVATCYDIRFPEQFKELARQGAQLIVVPTSW ADGPGKLEQWRLLSAARALDSTAYILAAGQARPGGETKAGEASGPTGIGHSVLVGPDGTR LAEAGYEPEILYGEVDPDAVAKVRESLPVLDS >gi|227860873|gb|ACLH01000047.1| GENE 14 14752 - 15951 1024 399 aa, chain - ## HITS:1 COG:Cgl2732 KEGG:ns NR:ns ## COG: Cgl2732 COG0543 # Protein_GI_number: 19553982 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Corynebacterium glutamicum # 11 362 16 380 385 121 27.0 2e-27 MRELGEHLRKHAEDYRDAVHGHFFATVAESRQVFALSMKDTHPSMAPALAWVLENMEDGE VRGDVAKRLARMGRDHRRHGFPPEIYPKFETSLVHGLQVLGLTPYQYDVATRTISHVCSI MRSAAQEADVAGLPPAHSAQVVAVEKPNRNTAVVRLESGMALDYRAGQHVPVTSQLTPGT WRPLTPAAPADDSGQLIFHLALAGEASSMLAKAQPGDWWTLGMPAGEPPQLDSDTTLISF GTGWAGARALLLDALENTLPSGLQVYAVAPSPGEHYDTEFQANLQALLPELKLRHIVREG QDPWLLGAQPAAHGFMPVVANEPMEPVLAEGTDRRFVLIGPADRVELARAALLAGGVAEE AITTDSWQRGHEWAASAAELDGWGDDWEAWAAWKKSQWA >gi|227860873|gb|ACLH01000047.1| GENE 15 16120 - 17490 1859 456 aa, chain + ## HITS:1 COG:Cgl2722 KEGG:ns NR:ns ## COG: Cgl2722 COG0786 # Protein_GI_number: 19553972 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Corynebacterium glutamicum # 3 448 2 446 449 480 62.0 1e-135 MEEFSAFTIMTDVGWISLLMVIGNVLRHQIKFVFQDLLLPAPITAGLLGLLLGPNVLGWI GFSDNLGDYTSLLIAVVFASMAFSMEMGGNMGKGARNMWGYSTMMFTGQWGLFIVLGLLL FKPTFDTPDWFGMMLPVGFTGGFGTAAAVGSALEGVGAEAASSLGFTSATVGTLAAIIGG IVAGNWGIRKGKVSHVPKQLPEELRRGYISRLEDRPSLGRATTNPSAIEPITLHVGFIAL TVMTAYGINKGISSVWENVSIPLFAMSMVVGLLFRAVMNMVGAKDYLDKDTVSSVSGAAT DYLIAFGVAAIVPAAVAAYWQALLLLFVLGTIYCIFFLMWFPAEFFGERWIERGIFGWGW ATATVATGIAILKIVDPKLKSGTLSEYGMAYIGFGPFEISWTIIAPLAVMYGFTAGFGWI SLGIAVVIYLVFKFTGMMPPRGTIFKEGIGHVGSEK >gi|227860873|gb|ACLH01000047.1| GENE 16 17696 - 19099 1666 467 aa, chain + ## HITS:1 COG:no KEGG:cauri_2311 NR:ns ## KEGG: cauri_2311 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 467 1 467 467 875 100.0 0 MHILYEGSPREVILESALHIGAAEGDEAITMESVAKLAELPVAEVRAEFPDREAIVHALP DYVTDRKVKFLEETLDAALGYADLFTKLTTFTEAYYEYAEREPELFRYLFEKKAYVSEDE WRALLQGNLSHNRTLDLIYENISLIAAEEKLKVGSDVCFQTVARLSAATLATVHGMAHLS VLGVLRHQHSVVRRFNLREVCKALIGTLFKAAEFLEIPDVRSPMQEYRALLAGFVPDRDI SLDISAIEDVQELSTERARMAVKERAIQLAAREGLQCVTIENVAEYFGVSDVFVASLVDN DFVLRESVEWETDRELEAHSLYLLERLPEGASAVDKLLCVAVAYFHYAVTFPERYSACIA AASGSVVPLSEDGEEQTQMGESFALLMRFAREALREAGYAPEDRLVYIKNLTLWAGADGM CHLASMGEFRDIDLEQKWSLYCFVTAVVLASFSYDLPEEQPQASQSA >gi|227860873|gb|ACLH01000047.1| GENE 17 19361 - 21922 1876 853 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 7 842 7 805 815 727 46 0.0 MSSFNPTTKTQEALQQALQTASANGNPDIRPAHLLAAILEQQDGIAAPVLKATGVDPDTV LKEARQLIDALPKAEGANMANPNFNRDALNVLTRAQELAGELGDEYVSTEVLLAAIAGSK TDAAELLTSRGATYDALKGAFPSVRGAARVTSENPEEQFQTLEKYATDLTARAREGKIDP VIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLLS LDLGSMVAGAKYRGEFEERLKAVLDEIKASDGQIITFIDELHTIVGAGATGEGSMDAGNM IKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYAAEPSVEDTIGILRGLKERYE VHHGVRIQDSALVSAAELSHRYITNRFLPDKAIDLVDEAGSRLRMEIDSSPQEIDELERI VRRLEIEELALKKESDAASKDRLTALQQELADEREKLGELKARWANEKKAIDDVQTIKEQ LEDLRRQAEIAERDGDLALASEINYGKMPPLEKDLAAAEEKAQQQHNTMLSEEVTPDTIA EVVSAWTGIPAGKMLQGETEKLLNMESVLGQRVVGQKEAVTAVSDAVRRARAGVADPNRP TGSFLFLGPTGVGKTELAKALADFLFDDESAMVRIDMSEFGEKHSVARLVGAPPGYVGYD AGGQLTEAVRRRPYTLVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTVIILT SNLGAGGTKEEVMEAVKRSFKPEFINRLDDVVMFEPLTSDLLSGIVDIQLKGLAERLSGR RLTLQVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAKKLLAGDIVDGDTVHVDVA DGGERLELAARTA >gi|227860873|gb|ACLH01000047.1| GENE 18 22018 - 22869 1033 283 aa, chain + ## HITS:1 COG:Cgl2717 KEGG:ns NR:ns ## COG: Cgl2717 COG2897 # Protein_GI_number: 19553967 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Corynebacterium glutamicum # 1 276 1 273 274 276 51.0 2e-74 MSILISPHELSEKIYRGDKTTILASLWAPGEGEAFNQFSSLHIPTAQYADAASAFVGLPG SKVGRNPLPQTEKIQEWIDLWGLEEDSEVVVYDEGRGLFAGRAWWTLRWAGIRNVRILDG GLSNWRAQSLPTLTGPGNLGMPSDFEVTTGSMPTATIDEVKEHKGLLLDVRTRNRFAGRR ENLDLKAGHIPGAVNLPERLFHTQDVTVWKSKEEILEILEQHGVTKENVDGAIIYSGSGN HSALTIAVLEHVGFTGLRHFVGGWSQWSANPKNPVERGDREHV >gi|227860873|gb|ACLH01000047.1| GENE 19 22934 - 24181 1300 415 aa, chain + ## HITS:1 COG:no KEGG:cauri_2308 NR:ns ## KEGG: cauri_2308 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 415 1 415 415 543 100.0 1e-153 MPFVLLSLAAVALVAGLIVLWLDHRQRAALSADETTTAADTAAPELTPDSPSEPALAEEP ALAEEPALAEEPEPAPEPDIITEPEPEPVAEPATEPTADAAEEPAAAEPSEEPAAEPQAA APSFAERAERAKYLVPGSARRERKAFGQQRGWEYLKHDSYLADEWTRGAAARGHEPRDIV AGTVRGHETLLFDMGAIPVMAMRTGAASDIVVDFRRAGEEIENLSEDLLYVREEEGFEVF SSDAGVGQRFIDTRVSTALNHLPAAVTAVWLEGEWVLAQTTRQARSAEWEELLEPLSLLA DAARVLPPRSEAAQVLRVDELDPSRDIPEPPQPEPTGPTAVPDRDDSLDAPTIQRPTEPV VMPSRTTSEARGTIDHSSLGADEVDAIADGHERPTHENNQARLPRRFDGGSSIFD >gi|227860873|gb|ACLH01000047.1| GENE 20 24330 - 24875 875 181 aa, chain + ## HITS:1 COG:Cgl2715 KEGG:ns NR:ns ## COG: Cgl2715 COG0461 # Protein_GI_number: 19553965 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 2 170 5 173 184 230 76.0 1e-60 MSLDQQKKQRLAELVKELAVVHGKVTLSSGKEADYYVDLRRATLQHEASRLIGSLLRELT ADWDYAAAGGLTMGADPVALSIMHADGRDIDAFVVRKEAKKHGMQRQIEGFNVEGQKVLV VEDTTTTGNSPLTAVKALRKAGAEVVGVATVVDRNTDAGAAIAAEGLEYRYLLGLEDLDL A >gi|227860873|gb|ACLH01000047.1| GENE 21 24868 - 25542 412 224 aa, chain + ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 22 224 2 206 206 322 79.0 2e-88 MPKPEEEAAAKGPTEWNEGRHGVGPWEGPLPEGPEAEKYDPELLAEGDRRNVVDAYRYWT REAIREDIDKRRHALHIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTD RYQHLMHHTDVSELMAWAADQDLTVVAIDNTPGCVPLETAELPERCLLLFGQEGPGVSPE AQDAAVMTCSIAQFGSTRSINAGVAAGIAMHAWIRQHADLSKAW >gi|227860873|gb|ACLH01000047.1| GENE 22 25606 - 26805 1112 399 aa, chain + ## HITS:1 COG:Cgl2713 KEGG:ns NR:ns ## COG: Cgl2713 COG4833 # Protein_GI_number: 19553963 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted glycosyl hydrolase # Organism: Corynebacterium glutamicum # 35 392 1 357 371 423 65.0 1e-118 MLEKWSHRADLAETAINERHAQAVWGLPRTNLAVVSWPPTTKESLFVHWHYWWQAHYLDC LVDAALRKNTKARRARIADTIRGIHVRNLRALTKNRYYDDKAWLALAIARAGELKKQRPY KKLGTLQHNIRDGIDTQVGVLPWREGETFLNVPSNGPGAIMLARMGRVDEARHIVDWIYD HLIDDDGFVMDGIRMRMDGQEIVRNIHPYCQGVVLGACLEIVLALREKTGLRSVEDIDSV HEAELAADMMDYTTRIRGLVQAVATGMATYTGVIDWQTGDGDGGLFKGILARYLADVAVR LPGDSPANRATKKLAARLVTASAESVWEHRLEVDGLPIFGSDWTADAKLPHNYGFGPSSL SQKMGIIRVAERDLSVQLSGWMLLEACTRIVKYKSESKK >gi|227860873|gb|ACLH01000047.1| GENE 23 26988 - 28022 1702 344 aa, chain + ## HITS:1 COG:Cgl2712 KEGG:ns NR:ns ## COG: Cgl2712 COG0191 # Protein_GI_number: 19553962 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Corynebacterium glutamicum # 1 344 1 344 344 574 87.0 1e-164 MPIATPEVYNQMLDTAKKGGFAFPAINCTSSETINAALRGFAEAESDGIIQFSTGGAEFG SGLSVKNKVAGAKALAAFAHEAAQHYGINVALHTDHCQKEVLDEYVRPLIAFSQERVDRG ELPLFQSHMWDGSAIPIDENLVIAQELLEKAHNANIILEVEIGVVGGEEDGVEAKAGANL YTSPEDFEKTVDALGTGEKGRYLLAATFGNVHGVYKPGNVKLRPEVLDEGQKVAVKKLGL EEGSQPFDFVFHGGSGSEKEKIEEALRYGVIKMNVDTDTQYAFTNPVARHMFANYDGVFK IDGEVGNKKVYDPRSYLKKAEQGMADRVVEACQDLHSVGKTVSK >gi|227860873|gb|ACLH01000047.1| GENE 24 28528 - 29430 232 300 aa, chain + ## HITS:1 COG:lin2267 KEGG:ns NR:ns ## COG: lin2267 COG2207 # Protein_GI_number: 16801331 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Listeria innocua # 50 209 123 288 292 81 29.0 1e-15 MSLEPREGTASAQALLIHLDTSYVASFNRGFIPQFSCCSTDFSGTHLGISELRKLSSQMM LEAQKVDSLSKEVAQESRLAAICAVLYRDFFEGDAPAARSADAERLQEMRRVIEYVDEHY QQKITLRNLADFAGYSPAYFSDLFSSVVGIPVSEYITRVRLAEAVQLLRRTDWPITDVAL AAGFPDNKALSLAFRRAFSKTASQYRKQLRSVEKTGVNVAAVDERFHEYFVSTTDSFVRD TLSEFAGESAEGRVAAEREQLQSLLAEVSQQAEKSGRHGAERDDAVDPVKAVILSERYWN >gi|227860873|gb|ACLH01000047.1| GENE 25 29556 - 30590 854 344 aa, chain + ## HITS:1 COG:STM3355 KEGG:ns NR:ns ## COG: STM3355 COG1951 # Protein_GI_number: 16766650 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain # Organism: Salmonella typhimurium LT2 # 49 341 4 296 299 355 55.0 6e-98 MTTTESEVLRGVPQRATRRAETPSTSTVPVEIEFAPSTKKPSELGHQFSPEVQLLIDRVA KFTDLVSKRLPDDVTERLRQLAEEEDQPMAKMIYKTMQRNQKLALDLDRPSCQDTGQIQI FARVGTEFPYLSELEPAMKEAIGIASETAPLRRNSVETFNEYNPGTNIGTKSPWLYTELI SGSDELELDVYLAGGGCSLPGQGKTLMPGEGYEAAMKFILDVMTSYGVNACPPMLIGVGI GTSIDTAGFMSKLALMRPVQSHNQNEVVAELEKNLETAINDLGLGPQGLGGKRSVMGVNI ENSARHPSVLSVAVNTGCWSHRRGTIHLDRDLNYRLLTHSGFEL >gi|227860873|gb|ACLH01000047.1| GENE 26 30621 - 31262 579 213 aa, chain + ## HITS:1 COG:STM3354 KEGG:ns NR:ns ## COG: STM3354 COG1838 # Protein_GI_number: 16766649 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain # Organism: Salmonella typhimurium LT2 # 6 213 2 205 205 283 64.0 1e-76 MSENTTAKTLTTPISQEDLQDIKAGDVIFLDGYIVTCRDVGHRRVVELGRELPLDLKGGA ILHAGPIMQKVEGTDRNGDEKYEVVSVGPTTSMRMEMFEYDFIEQTGVRLIVGKGSMGPN TEAGCKEFGALHCVFPAGNAVIAATEVEEVEESYWRELGMPEALWVMRVKQFGPLIVSID ANGNNLYTQKKEEYNARKETILEDLYEKVRYIK >gi|227860873|gb|ACLH01000047.1| GENE 27 31259 - 32758 1177 499 aa, chain + ## HITS:1 COG:CAC1590 KEGG:ns NR:ns ## COG: CAC1590 COG0471 # Protein_GI_number: 15894868 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Clostridium acetobutylicum # 31 499 17 476 476 381 43.0 1e-105 MSAVLPTDTPPEDHHAVAERPPSAEVHPIGLAIAVGVGVAVWLVPTPEGLQPNAWHLLAI FLATIVGIIIKAAPMGALSVVAIALCAGTQVLAPGEPGESMSLALSGFSNSTIWLIVSAF FVSRAVITSGLGTRMALCFVRLFGKSTLGLAYGLGLTDLALSPFIPSNTARAGGIVYPIT KSICLSSGSDPNDPSTFRRIGSYLALTGYNMNLAVSVVFFTGAAPNAMAAKFAANDNVSI TWGGWFLAAAVPAMVGVLLVPLVVYAMNKPELTKTPEAPAAAARDLAALGPMRRSEWVTL GVFLLMIVLWIFGGRLVSATAVAFLGLGILLLTSALTWKDMKSEKAAWDTLVWFSALVMM GTQLNELGFVGWFGDNVGSWVEGLNMGTLGTFALLTILYALAHYMFASGTAHTAAMFTVF FSVGLALGLPGVPLAVFLGAIPTIFGCLTHYGNGPAPIYYGSGYVDLGLWWKVGGVLGAL YVLIWLCIGIPWWMLLGLW >gi|227860873|gb|ACLH01000047.1| GENE 28 32803 - 34017 1423 404 aa, chain + ## HITS:1 COG:Cgl2711 KEGG:ns NR:ns ## COG: Cgl2711 COG4129 # Protein_GI_number: 19553961 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 19 404 8 388 389 358 51.0 9e-99 MAEETSSSSSTVKRVRKTTREQLRLVDKSLKARLTRIRNRLVFMLQCTLGAGLAFYVAHD FFGHDQPFFAPMAVIIILGLSGNDRLKRAIDMSIGGIVGVLVGTLLVDALGTGPIHMTII IGLALIIGSFVTSSQLVSNQIVIAAILIATILPPEEMGGLSRAIDAIIGAVIGLTMIVLI PSSPLRAGRSEVSKVLGITSLVLSDVAKGLEENDPETITEARDAVRGTQDDINNMLNATK GGAETARLSPFLWSTQRTVRSLERILTPVDNMVRGTRVLSRRALVLAEDGDQATAEQVEI IDELAEITMELSDLYTHQTAHERRVDEAQAIPEIVNRLRQLGARCSMDIAGEEAVLSAYA VLAQTRSIIVDLLMVCGMSRESAVAQLVPTSKHPAYPPEVWEED >gi|227860873|gb|ACLH01000047.1| GENE 29 34060 - 34668 117 202 aa, chain - ## HITS:1 COG:no KEGG:cauri_2298 NR:ns ## KEGG: cauri_2298 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 202 59 260 260 386 99.0 1e-106 MDPTVELKKILRLASWIDQDARLWLENLERVTKLAAQRTPKLNTAILGHADDSLFTFYQR VGAVILEASTPLAKVDYIGFYFSQKIVGIYPKVLDIEIASSWNKKTSDALKKSSDPEEKR LGKIMSHALSDPFVKSYPPENTYKVYHLSGSKHPSTLTTAEKQDIVHEASGRGSAFVKRP RYFQSSSLLAARVTSDLPSPSK >gi|227860873|gb|ACLH01000047.1| GENE 30 34892 - 35152 317 86 aa, chain - ## HITS:1 COG:no KEGG:pREC1_0019 NR:ns ## KEGG: pREC1_0019 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 3 75 1 74 354 82 52.0 4e-15 MPLTHKISWVSDARFAPYLEECGTVEEAWKLYELNAQIAAALSEVIHHTEVLLRNAMSDS LANAHPFDFGWNQDSFDISALSTIAS >gi|227860873|gb|ACLH01000047.1| GENE 31 35375 - 36295 747 306 aa, chain - ## HITS:1 COG:no KEGG:cauri_2297 NR:ns ## KEGG: cauri_2297 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 306 1 306 306 567 100.0 1e-160 MICALLDCGGHLTDAHTTALTETARHGVRIEYFRVAEVPSRQELKTIDALAKEILPEDPT PSLDEIAAQPDVSHLGAPGPAPQAPFLNESLRIVVIGNDAALSAVLTRMMRADYLWAEVG FVPTGEYSTAAMNWGLKTHETGQGLADQVAVVEEALSFALTAPVKPVPLIRNDAGLAVAG SATIAEWSNEEITGEIIVDDAILLRADRKKNVFGAKLVPMTDAPGIVAAKAVTSFEADAA PRRGLFARLRKPAQPGQLDPASVIQGRAVQAGGPSLSVSVDGVRAKRPVKRVTFYRHLRD LQIVRP >gi|227860873|gb|ACLH01000047.1| GENE 32 36485 - 37576 1005 363 aa, chain + ## HITS:1 COG:no KEGG:cauri_2296 NR:ns ## KEGG: cauri_2296 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 363 1 363 363 564 100.0 1e-159 MSARMTTLALVSTAGLLMSSCSFMGGSLIETEEPAFTEAAAESTTSSATTTSSKATSTSS SASSSSVNADCDEKQELEDTKLSKVLENEEAYVKGSTEKFEDVSVGEDEYDPCKFLSYVV LEGKFDGKDVKVPVFFSKGALRDEDALYITSSSLEVEEDGEGYTYESETDGDIVGVEGKV NKRPGTEATSMENSFDGVNSDIFFIDVKSETTDSADLAQDEEDLRGETLFDISADGWNLV CGIDASEKSIDCAHGDDGAWVVKSDKTNLPEDMEFDVVSLRPLEGETSFNQGGVDNLPTD GKKIESNGLYRIGVDDIEAQIAVVDDGVIISTPNNSRLMFTNDAIFIEEKDKGDGANSNT ETA >gi|227860873|gb|ACLH01000047.1| GENE 33 37726 - 39018 1967 430 aa, chain + ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 429 1 429 430 796 89.0 0 MAAIVIVGAQWGDEGKGKATDILGGKVDYVVKPNGGNNAGHTVVVGGEKYELKLLPAGIL SENATPVLGNGVVINLEALFDEIDGLEARGANASRLKISANAHLVAPYHQTLDRVQERFL GKRAIGTTGRGIGPAYADKVARIGIRVQDIFDESILRQKVESALDIKNQMLVKMYNRKAI EPEQVVEYFLSYRDRLRPMVIEAELELNQALDEGKHVLMEGGQATMLDVDHGTYPFVTSS NPTAGGAAVGSGIGPTRITTSLGIIKAYTTRVGAGPFPTELFDKWGEYLQTTGGEIGVNT GRKRRCGWYDSVIARYATRVNGFTDYFLTKLDVLTGIGEIPICVAYDVDGKRYDEMPLTQ SEFHHAEPIFETMPAWDEDITGCQTFEELPQKAQDYVLRLEELSGCRISYIGVGPGRDQT IVRHDVMQDQ >gi|227860873|gb|ACLH01000047.1| GENE 34 39192 - 40538 1320 448 aa, chain + ## HITS:1 COG:Cgl2702 KEGG:ns NR:ns ## COG: Cgl2702 COG0027 # Protein_GI_number: 19553952 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Corynebacterium glutamicum # 7 403 3 402 408 449 58.0 1e-126 MTTVGDIAGQIGTPLTGNATKVLLLGAGELGKQLVIAFQNLGLEVHAVDRYAGAPAQQLA HFSYIADIRDPYKVWELTERIKPDYVVPEVETVAVEALKRIEEFGTTVVPSARACELTQC RESVREVAESIGLPVTAYRFAESAEELQEAVGELGLPCIVKPDITTSGKGHVLLKDEEDV EETWSMVRHVSSEYKRVVVERFVDFDYEVTLLAVRSIDPATGKMATWFSEPIGHRHEKGD LVESWQPMAMSEDALANARSVAARISNELGGRGVYGVELFVAGDEVYFSSVSPRPLDTAM LTGYTQRFSEFELHVRAILGFPIDVTLVSPGAAVILHADAELDDVTFTGLDTALSYEETD VRLFGKPWAYAGRRMGMVATTAEDVETARDRAALAAGKITVGPNADRTVHGDSQPVEPTA TVVSDIEVIEVPEPVIDVDPKLMRSTDD >gi|227860873|gb|ACLH01000047.1| GENE 35 41187 - 41609 307 140 aa, chain + ## HITS:1 COG:no KEGG:cauri_2293 NR:ns ## KEGG: cauri_2293 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 28 167 167 264 100.0 1e-69 MVTVPWAKANAAEPTDFVPNMTLGAQAENPYVDHSWGELVWAGKPPRVAGNAERGNEAND VGWAWCIDTTIYGPMNTYSAYKAETAGKAPIPEGFRDAAINLAVKLRDATEREDKGAASR YSVYLAAVLGADQKTKLPQC >gi|227860873|gb|ACLH01000047.1| GENE 36 41603 - 41927 160 108 aa, chain + ## HITS:1 COG:no KEGG:cauri_2292 NR:ns ## KEGG: cauri_2292 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 108 1 108 939 191 100.0 8e-48 MLTITGEDRAYKAPGGFEWYPYFNGSPEEFKQLTGYGIETFRITDDYGFETDDYGFEFVA DPTVDIPAAPADSFITIVGPDGNLERGDLDAQRVMPPDQPGLPDDEGE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:29:10 2011 Seq name: gi|227860872|gb|ACLH01000048.1| Corynebacterium aurimucosum ATCC 700975 contig00110, whole genome shotgun sequence Length of sequence - 63079 bp Number of predicted genes - 59, with homology - 56 Number of transcription units - 23, operones - 12 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 795 851 ## cauri_2292 hypothetical protein + Term 865 - 911 12.1 + Prom 875 - 934 3.2 2 2 Tu 1 . + CDS 1009 - 1920 978 ## cauri_2291 hypothetical protein 3 3 Op 1 7/0.000 - CDS 1956 - 2783 1028 ## COG3711 Transcriptional antiterminator - Term 2800 - 2856 10.3 4 3 Op 2 . - CDS 2899 - 5007 2970 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 5140 - 5199 2.2 + Prom 5115 - 5174 2.6 5 4 Op 1 21/0.000 + CDS 5361 - 6725 1617 ## COG0280 Phosphotransacetylase 6 4 Op 2 . + CDS 6726 - 7946 1704 ## COG0282 Acetate kinase - Term 7890 - 7917 -0.5 7 5 Op 1 4/0.111 - CDS 7943 - 10531 3130 ## COG0515 Serine/threonine protein kinase 8 5 Op 2 . - CDS 10531 - 11622 950 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 9 5 Op 3 . - CDS 11622 - 13058 1600 ## cauri_2284 hypothetical protein - Prom 13124 - 13183 3.3 10 6 Op 1 2/0.333 + CDS 13143 - 13631 444 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 11 6 Op 2 . + CDS 13671 - 14609 1057 ## COG1131 ABC-type multidrug transport system, ATPase component 12 6 Op 3 . + CDS 14609 - 15373 1044 ## cauri_2281 putative ABC transport system, permease protein + Term 15399 - 15434 7.4 13 7 Tu 1 . + CDS 15451 - 16545 873 ## COG0477 Permeases of the major facilitator superfamily + Term 16705 - 16740 -0.9 - Term 16832 - 16864 0.6 14 8 Op 1 1/0.333 - CDS 16874 - 18337 1822 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 15 8 Op 2 3/0.222 - CDS 18344 - 19153 1053 ## COG0708 Exonuclease III 16 8 Op 3 3/0.222 - CDS 19159 - 20157 1088 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 17 8 Op 4 . - CDS 20157 - 20771 922 ## COG0242 N-formylmethionyl-tRNA deformylase 18 9 Op 1 . + CDS 20770 - 21042 341 ## cauri_2275 hypothetical protein 19 9 Op 2 . + CDS 21069 - 21833 979 ## cauri_2274 hypothetical protein 20 9 Op 3 . + CDS 21882 - 23018 1303 ## COG2170 Uncharacterized conserved protein + Term 23043 - 23082 6.5 - Term 23027 - 23074 10.9 21 10 Op 1 . - CDS 23185 - 24408 1289 ## cauri_2272 hypothetical protein - Term 24449 - 24488 4.6 22 10 Op 2 16/0.000 - CDS 24497 - 24877 466 ## COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit 23 10 Op 3 15/0.000 - CDS 24874 - 25146 372 ## COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit 24 10 Op 4 12/0.000 - CDS 25146 - 25664 661 ## COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit 25 10 Op 5 21/0.000 - CDS 25661 - 27457 2046 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 26 10 Op 6 6/0.000 - CDS 27450 - 27950 667 ## COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 27 10 Op 7 . - CDS 27950 - 30865 3325 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - Prom 30955 - 31014 3.0 - Term 31036 - 31087 17.3 28 11 Tu 1 . - CDS 31094 - 32461 1850 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 29 12 Tu 1 . + CDS 32558 - 34531 2701 ## COG1297 Predicted membrane protein + Term 34587 - 34630 9.2 + Prom 34616 - 34675 2.5 30 13 Tu 1 . + CDS 34823 - 36469 1526 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 36597 - 36634 -0.7 31 14 Op 1 . + CDS 36789 - 37073 63 ## 32 14 Op 2 . + CDS 37105 - 37296 380 ## cauri_2262 hypothetical protein 33 14 Op 3 . + CDS 37344 - 37478 265 ## + Term 37520 - 37559 10.2 + Prom 37480 - 37539 2.1 34 15 Tu 1 . + CDS 37633 - 38532 1404 ## COG2326 Uncharacterized conserved protein + Term 38577 - 38623 18.2 - Term 38563 - 38613 19.9 35 16 Op 1 1/0.333 - CDS 38638 - 42615 4663 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 36 16 Op 2 . - CDS 42616 - 43092 562 ## COG1846 Transcriptional regulators 37 16 Op 3 . - CDS 43153 - 43482 187 ## cauri_2257 hypothetical protein 38 16 Op 4 . - CDS 43492 - 43719 118 ## Glov_2138 hypothetical protein 39 16 Op 5 . - CDS 43780 - 44082 346 ## COG0607 Rhodanese-related sulfurtransferase 40 17 Tu 1 . + CDS 44185 - 46821 1771 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Term 46629 - 46667 2.2 41 18 Op 1 19/0.000 - CDS 46879 - 47535 776 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 42 18 Op 2 . - CDS 47539 - 48243 507 ## COG4585 Signal transduction histidine kinase 43 19 Op 1 . + CDS 48312 - 49028 287 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 44 19 Op 2 . + CDS 49025 - 50425 1426 ## cauri_2251 hypothetical protein 45 19 Op 3 . + CDS 50422 - 51354 1085 ## cauri_2250 putative nisin-resistance protein + Term 51571 - 51610 3.2 46 20 Tu 1 . - CDS 51388 - 51897 460 ## cauri_2249 hypothetical protein - Prom 52056 - 52115 2.5 47 21 Tu 1 . + CDS 51830 - 52021 65 ## - Term 52328 - 52399 18.2 48 22 Tu 1 . - CDS 52417 - 52890 799 ## COG0221 Inorganic pyrophosphatase - Prom 52923 - 52982 2.3 + Prom 52849 - 52908 2.7 49 23 Op 1 2/0.333 + CDS 52960 - 54246 1604 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 50 23 Op 2 10/0.000 + CDS 54215 - 55189 539 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 51 23 Op 3 11/0.000 + CDS 55179 - 55766 766 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 52 23 Op 4 4/0.111 + CDS 55816 - 58272 3483 ## COG0465 ATP-dependent Zn proteases 53 23 Op 5 4/0.111 + CDS 58262 - 58852 793 ## COG0302 GTP cyclohydrolase I 54 23 Op 6 15/0.000 + CDS 58858 - 59787 1088 ## COG0294 Dihydropteroate synthase and related enzymes 55 23 Op 7 17/0.000 + CDS 59791 - 60162 172 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 56 23 Op 8 . + CDS 60162 - 60632 634 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 57 23 Op 9 . + CDS 60636 - 61109 381 ## cauri_2239 hypothetical protein 58 23 Op 10 . + CDS 61115 - 62428 1282 ## cauri_2238 zinc metalloprotease (EC:3.4.24.-) 59 23 Op 11 . + CDS 62429 - 63077 692 ## cauri_2237 hypothetical protein Predicted protein(s) >gi|227860872|gb|ACLH01000048.1| GENE 1 1 - 795 851 264 aa, chain + ## HITS:1 COG:no KEGG:cauri_2292 NR:ns ## KEGG: cauri_2292 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 264 676 939 939 258 100.0 2e-67 QNQTVPKPTEETTPNNPGEETTPNEPGEETTPNQPGEETTPNNPGEETTPNQPGEETTPN QPGEETTPNNPGEETTPNQPGEETTPNNPGEETTPNQPGEETTPNNPGEETTPNEPGDEP SESTTETPDKGDGNDKDDNDGSSKKSDLPWWLLLIPGLGLIKLIIDGGNGGNGGDHDGGK GTSEVVEENGRGGDHGESTGDNAGEPSEQTGDNTGRDDREVTVLDTTPPEDAGMPLPSNA ERVEIKHVPSGATKLEPGMKDFIK >gi|227860872|gb|ACLH01000048.1| GENE 2 1009 - 1920 978 303 aa, chain + ## HITS:1 COG:no KEGG:cauri_2291 NR:ns ## KEGG: cauri_2291 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 303 1 303 303 472 100.0 1e-132 MADSEEPNGIPEYPAQGSGSESETEPTSSSAAVPSGGAHRKPEDGEKKGGKKALWAILAL IAIVLVIVQLVVYFGRGGDDDDAGDSAASSTVAEQSEEAAPTTNNDPFVDDSGEQDKEID AAPGEFRGFGAMSLGINDEFAAVDPIQVTDTGMLIPPRDVQRLGWYSASAVPGEAGPVGS SVITGHINYQGQGTGFAEKFTTLEQGQEFTVFIDGEERKFRVTEAPYRLPKGSGFPDVVN DTQGDNRLVLITCGGKFVGGELGYEDNIITVAEPVAPVEGGAEAPTDGAVDAPAEGAVEA PAA >gi|227860872|gb|ACLH01000048.1| GENE 3 1956 - 2783 1028 275 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 270 1 273 277 141 29.0 1e-33 MQLLRVFNNNVVLARRGAEDVIVTGRGIGFQAKPGTEVDPAKVVKVFVPDSGRDPDHLAA MIAGIPGEYVQLVIDAMHSVDMSEALRGKLTLVVAIADHIHGAVSRGKPVTYPLEAEVRH LYADDFALAQQLLTAINSGLHKPLAPDEAVAITLHLVNAGFAVGDLSGTYRMTGLIQQIL AVIGSHNDTELNSEDISVARFITHLRYLFVRMAEHQQLDSDDRQVATAISARYPDAVETA QMVANLIELRLDDTLTPDEVSYLTLHIARLEEASA >gi|227860872|gb|ACLH01000048.1| GENE 4 2899 - 5007 2970 702 aa, chain - ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 119 505 1 370 415 385 53.0 1e-106 MSTETRSAAEAILDGIGGAENITSFTHCATRLRFELADASKADKEALESIPKVMGAVPQG GRNYQVVIGGDVATVYDEINALPQMKNAGASAGQSNDDVKAAARAKSKGKVPWMDTFFEY LSDSFRPILGVLLGASLVIAFASVLDAFGVVDFRSPDKPASWFFVDAMWRSVFFFLPVMV AYNAGKKLRIDPWVPAAVMLALFTPEFLDLSENPAVQCVTNDTLGAEQCSIEIFGMTMQL QDYGGNVFVPLIMAAVAALFYKGFQKIIPSAVHMVFVPFLTMIVLIPLTAFLIGPFGVWA GNGIGAGLSWMNDNVPFVFALAIPMLYPFLVPLGLHWPLNALMLVNIQTLGYDFIQGPMG AWNFACFGATAGVLALSIRDHDNVMRQTSGSALLAGLLGGVSEPSLYGIHLRYKRIYPRM LVGCFAGGLTVALLTLGTNGITTDAFVFTSLLTIPVFTPMAKYAISIAVAFFVAFLLILF TDYRTPEERAEAKAAREAAEKAELDNADNADNAALADAPAATATAGAGAGAATATATKAD APAKAAEPAAGTTTDIASPANGKVVPMAEIDDPVFSAGTLGDGVGIVPEGNDVYSPVSGT IVSAMKSGHAYGIKTEDGVEVLVHIGINTVKMKGEGFAPAVKKGDTVKQGELLATVDFAK VTEAGYDTTIVLAVTNTKALSAVTPAGLNHASAGDTVITTTR >gi|227860872|gb|ACLH01000048.1| GENE 5 5361 - 6725 1617 454 aa, chain + ## HITS:1 COG:Cgl2696 KEGG:ns NR:ns ## COG: Cgl2696 COG0280 # Protein_GI_number: 19553946 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Corynebacterium glutamicum # 9 452 7 458 461 484 61.0 1e-136 MTAKSSRNSAFISVIGRGFDGLDVAAVAQELGATFAQVDDLGTTLSEVLENAPTGNLVLQ GTGVMDFDAKAAAALGLPFVLISAAPARAAELALNHARSVGATVVGALTDVSSVPGAISS LEEIEPYMSAELFQKQLLDQAREIGAHIVLPEGEDDRILEAAGELIKGKVAKLTILGDGN VEKRAQELGIDLSSVDIINHLESPLAEEFAADFAELRKQKGVTLEQARETMKDVSYFATM MVHKGLADGMVSGAAHTTAHTIKPSFQIIKTKPEASVVSSIFLMVMPGRLWAFGDCAVNP NPTPEQLGEIAIVSAQTAAQFGLDPRVALLSYSTGTSGAGPDVEKVGQAVEVARGIDSSV AVDGPLQFDAACDPGVAAKKAPESDVAGKATVFVFPDLEAGNIGYKTAQRTGGALAVGPI LQGLNKPVNDLSRGATVPDIINTVAITAIQAGVK >gi|227860872|gb|ACLH01000048.1| GENE 6 6726 - 7946 1704 406 aa, chain + ## HITS:1 COG:Cgl2695 KEGG:ns NR:ns ## COG: Cgl2695 COG0282 # Protein_GI_number: 19553945 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Corynebacterium glutamicum # 1 397 1 397 397 549 67.0 1e-156 MAYVLVLNSGSSSVKFQLVDPESSATDTPLVSGLVEQVGEPQGAVTVKTGGEEFKEELEI PTHSFGLDRAFSIMHEHGVGPTDVEVIAVGHRVVHGGRLFSEPQLIVDQIESMIEDLIPL APLHNPANLDGIRVARKLLPEIPHVAVFDTAFFNHMPPAAALYAINNDVASQYDIRRYGF HGTSHEFVSQQVPKLLDRDPGHVHQITLHLGNGASAAAIRNGRPIDTSMGLTPLAGLAMG TRSGDIDPGIIFHLSREAGMSIDEIDNLLNKRSGVKGIAGVNDFRVLRERINNEDQDAWL AYNIYIHQLRRFIGAYMIALGRVDAITFTAGVGENDTEVRQDSLYNLDMYGIDFDKEANL VRSKEPRMISTADSQVKVFVVPTNEELAIAQKSAGIAAMAREAGLY >gi|227860872|gb|ACLH01000048.1| GENE 7 7943 - 10531 3130 862 aa, chain - ## HITS:1 COG:Cgl2694 KEGG:ns NR:ns ## COG: Cgl2694 COG0515 # Protein_GI_number: 19553944 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 74 862 11 822 822 925 60.0 0 MSHRFSEDELDHLTPEEHETAEPEAPADATQAVRFDPFADDDDDYSEDHLLGTSPAKPGD PRTAASGADNTEASDRTAAVPFDPFADDFGEDEPAATGAVLSPAGQPGAHGSATNKPGDG EYVDSDNIAALIEELGQLRDRRKAEDPSQASRRRALDTFRQRRSTKRTDREVADGMATLP FVVPDDPTQALIDPQDAPRAAPPQLKPGDMVAGQYEILGVLAHGGLGWIYLANDHFVSGR IVVLKGMQSTNSAEETATAEAEREFLADITHPNIVKIFNFIDDPRVPGGFIVMEYVGGPS LKQRRNDQANDRFPVDTAIAYILEILPALDYLHARGVVYNDLKPSNIIVTEDQVKLIDLG AVSGIGAFGHIYGTQGFQAPEISTQGPSVASDIYTIGRTLACLTLKLPVEDGVYKPGLPS PTEEPLLRRYLSFYRLLLRATDPDPEQRFASVSELRDQLFGVLREVIALRDGIQHPAQHS VFSPQRTTFGTKHLVFRTDQLIDGIDRTVRITAPEVVSALPIPLVVRSDIGAPLLQGSSY TEPQEALETLRQAMQAPEYEESAEIPLGVVRAMIDLGYIGQAREWLTSIEERLGKDWRFH WYSGVTELLLDKYREAQAHFAHVLDVLPGEAAPKLAIGAVNELILQQLGFSEAALIDAAV ARACANLTTSLADLPNDAFEDQPGIWDHITDDPAHLRFNSLRLYGIVWATNPTTVSSAFG LARQLRAEHQVELAVATLDKVPNASRHHRMARLTTVLQLIVHDLSESRIRRAARRLEEIP QNEPRFLQIKIAVISAGLTFLRESDLKAAASPNDLFEFPFTQRGLRYGLADTLRALARQA PFARHRYALVDLANKVRPVTMF >gi|227860872|gb|ACLH01000048.1| GENE 8 10531 - 11622 950 363 aa, chain - ## HITS:1 COG:Cgl2693 KEGG:ns NR:ns ## COG: Cgl2693 COG0834 # Protein_GI_number: 19553943 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 32 339 29 335 344 290 53.0 2e-78 MRRRNPQRLAWTTALLLLSSAVALSGCEPEPPSTQDPILPSTANLDSTPGPPLPEDAIIE PAGAGEASKQSTEEAYGSYRPDDKKPEERVPDILARGRLIVGVDRSNNLLSYRDTASGEV RGFEVDIAREIARDIFGDPNKVDFRFVEASERARALNDRTVDIVIRTMTISPSRQREVSF SIPYMQTDARLLVLKNSGVESIADTAGMTLCATKGSTMVDAIRTHAPASDILETRAWGDC LMALQLGQADGIVVDDALLSGMLAQDRYTEIVGGPLESQSYGVAVRKPDGSYDSRPLIRQ VNSTLERIRKDGTWQRLFTTWLGDYMEQPVLPAPKYLDETPPATESQPTSPTSNPPGEKK EGH >gi|227860872|gb|ACLH01000048.1| GENE 9 11622 - 13058 1600 478 aa, chain - ## HITS:1 COG:no KEGG:cauri_2284 NR:ns ## KEGG: cauri_2284 # Name: glnX # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 478 1 478 478 860 100.0 0 MTGPATELREHSPESWGDHWLDEVTEPAAPAFSRPTQLAMSSFSGPARVLRRFYSFASTT PGKLFTVTVILTAALAAAGFSMSSSSAARHDDLDTLLTSTEPMSNAAHHLYTNLSLADTV ATTGFVQAGVEPEHNRNRYNEAIDAASVAATQAIVGTSAEDERVRELVTFIQRELPVYTA LVEKARVNHRAGHAVANSYMSNASALMRTQILPAAAELFTLTSEKVSQQQQRLTRPQWVP LSGLVAALIFLGLAQWWLWRLTRRRFNRGFVAATGLLFLALVWASASNFATWASGHQGFE TVSRPWDSLTASRIEAQQMRTSETLALVLRSSEQDMSVHFSSTVYSVDQALRDYEQALND DDFPSSDPSLIPRAKQAVEDWTSTHEKFTEDLAMGDYDGALYQATAIDPDGDPTAASAFN AVDSSLAALIDQARDAMRTYLVQGLNAMTMVSTGVLLATFGAIIAVWLGIRPRLQEYL >gi|227860872|gb|ACLH01000048.1| GENE 10 13143 - 13631 444 162 aa, chain + ## HITS:1 COG:Cgl2691 KEGG:ns NR:ns ## COG: Cgl2691 COG0494 # Protein_GI_number: 19553941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 11 155 8 161 167 156 58.0 2e-38 MCTRVNPELSGDGWSKGPGGVPVWGKFGAAGLFLVAGDQVLLQHRATWTNNGGTWGIPGG ARDKPESPERAALRETEEETGISPADVEVLGSLVTAGPFEEGWTYTTVLARTVSGQRLAT TANEESAELRWVPFNQMEELELLAPFREALPRLLKYWEENGS >gi|227860872|gb|ACLH01000048.1| GENE 11 13671 - 14609 1057 312 aa, chain + ## HITS:1 COG:Cgl2690 KEGG:ns NR:ns ## COG: Cgl2690 COG1131 # Protein_GI_number: 19553940 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 1 303 1 303 310 382 66.0 1e-106 MIEVAGLTKQYKSVRAVDDLTFQVEPGQVTGFLGPNGAGKSTTMRMILGLDKPTAGTALV HGKPYRELKNPLREVGALLDAKAVHANRTAANHLTWMAQANGIPTSRVDEVLGLVGLADV AGKKAGGFSLGMGQRLGLAAALLGDPGVLILDEPVNGLDPEGIRWVRSLVRALAAEGRTV LISSHLLAEMAQTADHLVVIGRGRLLANQRTYDFVKENSSSSVIVRSEHLREFGSALKEA GIFYHESADEEQRPTLVIPHQTTDYVGQLAYSTGVPLTELTLHRASLEEAYVAMTDRAVQ YQAEAPQEGVNR >gi|227860872|gb|ACLH01000048.1| GENE 12 14609 - 15373 1044 254 aa, chain + ## HITS:1 COG:no KEGG:cauri_2281 NR:ns ## KEGG: cauri_2281 # Name: not_defined # Def: putative ABC transport system, permease protein # Organism: C.aurimucosum # Pathway: not_defined # 1 254 1 254 254 452 100.0 1e-126 MFLNTVHSEWTKLRTTKSFWWTTVLIFLIVTGWTLLNSLNAGEAVLGISPLQERSLGSII LLMGMPIIMIQAAMVVTTEYRYRTQSLTFMANPKRWTVACAKLLLYGVIAAIIAFLGLVY IFVLADVTTNESAAEAFQPFASEDGKYMLWAFPLAAFGVVAFVQGLGMLLRQTAGTVAIC LILYLGLENIVRVLPLVGDKAIHFMPFTAFQNWAVNYVDENAPWSSVGFEALVFFGWAAV LWIVGVIVLEKRDA >gi|227860872|gb|ACLH01000048.1| GENE 13 15451 - 16545 873 364 aa, chain + ## HITS:1 COG:Cgl2686 KEGG:ns NR:ns ## COG: Cgl2686 COG0477 # Protein_GI_number: 19553936 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 1 349 33 382 398 245 49.0 9e-65 MPEIVAELGTTRSMVQLTISGFFIGMGVGQLVMGPLSDAIGRKRLLVAGAALALAASVLA AMAPTATVLVAARVLQGLGGGACTVLARAVVPDLVHGSAAAKAYSLLMALQGIAPAVAPV LGGVLAEPLGWRGIFWVLAGLHAVQLVLAVAIVPETAGGRSRAGLFRTVAGNYWAVLTNA RVWGYLVTMAFGFCSMFCYISASAFVVQDQWGFSPLGYSLIFGVNSVGLFAATLVNSRAM DSVSPAVMLRIGVTGVFVCGVLLLLSVLFGAPVWVCLTVLFACVAPTGFIMGNATALATG LMRPRAGSVSAIMGFGQSMLASAISPLMGWDSNAALTMAIGMVCCSFISLYGLVVSTRLA RGAA >gi|227860872|gb|ACLH01000048.1| GENE 14 16874 - 18337 1822 487 aa, chain - ## HITS:1 COG:Cgl2685 KEGG:ns NR:ns ## COG: Cgl2685 COG1502 # Protein_GI_number: 19553935 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Corynebacterium glutamicum # 1 487 1 500 500 600 60.0 1e-171 MNLNIDLSVWQFVLLLIDYGIKIIAIGVVPEGRRPSSSTAWLLAILVLPIVGLPLFLLMG SPYINRRRHRIQQEANALLSDVTASTPNHPSGRLSPEVESLIQLNRNLTGHPALIGHNKG LHASYEEAILAMARAVDRAEKYVLIEIYIQSWDEVTDVFFQSLARARERGVEVKLLLDQI GSLKYKGYFTLGKRLTEIDVDWRLMLPLQLHKGRFRRPDLRNHRKIVVIDGHTGFLGSMN MIKREYKTKDRAWIDYMVELTGPVVTSLAAVFAVDWYLESEEQLSLDMQPYDDAMTADSN HLQLVPSGPGYTTEPNLRMFNSVVHHAKEKLILCSPYFIPDESLLEAVTTACYRDVEVEL LVSAKADQFMVNHAQSSYYQALLEAGVRIFQFPEPFVLHSKFILADPNLPERDSLCMFGS SNMDMRSFGLNYESTMLVAKGDLIDDFTQLASNYKKVCHELTLEEWNERGLLRRYVDNVM RLTSALQ >gi|227860872|gb|ACLH01000048.1| GENE 15 18344 - 19153 1053 269 aa, chain - ## HITS:1 COG:Cgl2684 KEGG:ns NR:ns ## COG: Cgl2684 COG0708 # Protein_GI_number: 19553934 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Corynebacterium glutamicum # 1 262 1 263 263 303 58.0 2e-82 MRIATWNINSVRTRAQRAVDLLAKHDIDVLCLQETKVADAKFPREPFEEVGYHVTCHGLN QWNGVAILSKEEPEEVQTFFPGQPGFHKDPAKEQAREARAVSARVRGIEIWSLYVPNGRE ITDRHFDYKLDFLYSLARYAENRTQSKLLLTGDFNIAPWDEDVWDMSPFRGKTHVTEPER AAFQMLEEAGLVEVTRRFTEEDRWTYFDYKSLRFQKNEGMRIDFQLASEPLARLVEGAQV DMVERAGDKTSDHVPLIADFDVPDFASVR >gi|227860872|gb|ACLH01000048.1| GENE 16 19159 - 20157 1088 332 aa, chain - ## HITS:1 COG:Cgl2683 KEGG:ns NR:ns ## COG: Cgl2683 COG0454 # Protein_GI_number: 19553933 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Corynebacterium glutamicum # 5 327 8 333 335 375 60.0 1e-104 MSRIFRSDSVQVGERVVARRDFGGVHSDVIGHVLSLEPLVIRPQEVGGYPSSLDAVEIPP EQLKIIKRLSPRTVRNSDIRAVEVATAAAFPGKEHKWTSDGQWLMRAGDGVTGRSNSAIP LGPSAGFLPVPMEEIEAFYERHDLPVCLAFPERIGKPAEKLVAAEPEAWELEPEILVMVR DLEDLPEPEEVTFRIDAQPDSEWLDLYHFRGHALPPLALEYLRSHIEGTMGFGRLLSPAG ETIAITRGTLTESGDGTVWLGYSAVEVAEGWRRKGLGTALGAHMLAWGKAHGAEKAYLQV VAHNTAGIRLYEKLGFLEQHRHRYARRLTQVP >gi|227860872|gb|ACLH01000048.1| GENE 17 20157 - 20771 922 204 aa, chain - ## HITS:1 COG:Cgl2682 KEGG:ns NR:ns ## COG: Cgl2682 COG0242 # Protein_GI_number: 19553932 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 1 203 1 192 193 305 75.0 5e-83 MTIRPIVIHGDPVLHNPTEPVTEPIDSPELQELIADMHETMDAAHGVGLAANQIGVNKRL FVYHCPDTDGPDGTELPEGGMRRGCVINPVLETSEIPETMPADDGSEDEGCLSVPGEGFP TGRADWARVTGKNEKGEDISIEGYGFFARMLQHETGHLDGFVYTDVLTGRYKRQAKKAIK RNGWTEAGLTWLPGEDEDPFGHED >gi|227860872|gb|ACLH01000048.1| GENE 18 20770 - 21042 341 90 aa, chain + ## HITS:1 COG:no KEGG:cauri_2275 NR:ns ## KEGG: cauri_2275 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 7 90 1 84 84 119 100.0 4e-26 MAYSLSMHSLSDLDAAILEFESHAPRDIGAKEEAIRAQLDITPVRYHQRLNVLLDNPAAH ASYPLLVTRLRRLRDAREDVRRAARDNTPD >gi|227860872|gb|ACLH01000048.1| GENE 19 21069 - 21833 979 254 aa, chain + ## HITS:1 COG:no KEGG:cauri_2274 NR:ns ## KEGG: cauri_2274 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 4 254 1 251 251 307 99.0 3e-82 MTNVNPENSASSADRARHAADSESAAAAPASASKLPLRGVAMVLIAVAVMLGMWALYAMT SDGSEDTAQDAPANDAAVSGPATGGVEGDAVTGGAEGEADKNKDAAENERPADADANAEN ADQAGAEHKENREGNAEAGAAAGNADRPQAEIPVNVFNNSGRANYAADEAERLKTEKFKV AEVGNISGDVLVAPQTTIFFPQGDAAAENLAKEVAAQYYGGNVPAEAIAPYPAELTGDYT KGDAVVVVLAVPQA >gi|227860872|gb|ACLH01000048.1| GENE 20 21882 - 23018 1303 378 aa, chain + ## HITS:1 COG:Cgl2679 KEGG:ns NR:ns ## COG: Cgl2679 COG2170 # Protein_GI_number: 19553929 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 8 378 5 375 376 548 71.0 1e-156 MNIPEENFARSPEPTLGVEWEVALVDPVTWDLVPRGAELIDVVRASHPSVHLEKEFLQNT VELVTGVCRTVPEAMGDLQTSLSAVREAANSMDVRLWASGGHPFTDFRKNPVSAKESYSE IINRTQYWGQQMLLWGTHVHVGISHEERVWPIINALMTKYPHLLAISACSPGWEGLDTGY ASNRTMLYQQLPTAGMPYQFENWEQWKSYMRDQAISGVINHTGSMHFDVRPASKWGTVEV RISDAASNLRELSAIVALTHCLVVHYDRMIDAGEQLPTLQPWHVAENKWRGARYGMDALV ITSRETDERWIKDELADLLVELAPLSEELGCARELQLVQEIIDSGAGYERQRRLYEETGS WQKVVKATAEEMEQLLPL >gi|227860872|gb|ACLH01000048.1| GENE 21 23185 - 24408 1289 407 aa, chain - ## HITS:1 COG:no KEGG:cauri_2272 NR:ns ## KEGG: cauri_2272 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 407 1 407 407 721 100.0 0 MKKLQGVPTICAVLALGIAVMVYKFSQFDGPHSFIYILPFDLSIYRMAGEDLNAGGLLYD APYIFQFPFTYPPFAGLLFKVLPFFSKGALTIIWPALMFLAVLAIVVMIFRERGVKVTPA AVLVAVLLTALTPANEAMHGSLYYGQVNVFLMLLVALDFLPLKRRLPGVGIGLAAGIKLT PAYMGLALLFEKRWWAALGAVITFLVTVVLGFLFVPDAMDFWTDAMFNSSRVGEHANPGA KSLRSLMFRELGIDGGIWWLLAVIVVFALTCLALRTAYLRGNRSAAFALTGLSTCLVSPF SWYHHFVWTIPFVVMVFVSVNQALTARLSGKFGEQLAGLASVAALFVVSLPFMSVPVWFT MSTANLDAIESFQPWATSLWTLSCIAFIAVYAVWGFVAPRKRAAEKS >gi|227860872|gb|ACLH01000048.1| GENE 22 24497 - 24877 466 126 aa, chain - ## HITS:1 COG:Cgl2677 KEGG:ns NR:ns ## COG: Cgl2677 COG1320 # Protein_GI_number: 19553927 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhG subunit # Organism: Corynebacterium glutamicum # 1 119 1 119 126 117 58.0 4e-27 MSYALIADVLSIILILVGSILILAAAIGVARFGDTMARVHAIAKPQTTGLIFTILGAIIK VTGSEDFSVAERGDLGILVLLVLFAMITSPVTAQRTTRIARREGLYGTPDSMLRNEAPAA RSMRRK >gi|227860872|gb|ACLH01000048.1| GENE 23 24874 - 25146 372 90 aa, chain - ## HITS:1 COG:Cgl2676 KEGG:ns NR:ns ## COG: Cgl2676 COG2212 # Protein_GI_number: 19553926 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhF subunit # Organism: Corynebacterium glutamicum # 1 89 1 89 91 105 62.0 2e-23 MDTDVYNILLTVAAGFLVVAFLITTWRIVIGPNSLDRLIAMDGLVAMFQCALATYICWTL DTTVSNAMLVVALLGFISTVSVTRFRKRDS >gi|227860872|gb|ACLH01000048.1| GENE 24 25146 - 25664 661 172 aa, chain - ## HITS:1 COG:Cgl2675 KEGG:ns NR:ns ## COG: Cgl2675 COG1863 # Protein_GI_number: 19553925 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhE subunit # Organism: Corynebacterium glutamicum # 4 170 3 169 169 188 58.0 3e-48 MRFAGIKHRFRPWFMVWIIVMWCMLMGEVTVANLVGGLLASLFIVFALPLPAMPVAGISV SWGKLFIFMAQWFVELMEASIKVGWLAVRPQEVPKTAIVKLPMRVENEFVLALAVSLYNL QPGGTVSDIDIANRMLTIHLLNADSEEHLEREIAAVRKLEADMIAIFERSHP >gi|227860872|gb|ACLH01000048.1| GENE 25 25661 - 27457 2046 598 aa, chain - ## HITS:1 COG:Cgl2674 KEGG:ns NR:ns ## COG: Cgl2674 COG0651 # Protein_GI_number: 19553924 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Corynebacterium glutamicum # 5 561 1 556 566 723 71.0 0 MSETISPLVDLLLPYISYLIPLPIIIPALAAALAMLFARNAHAQRRIAFFSLLTLATVNA ALIFIADTTGIQTVQVGGWDAPVGITLVADRLSTVMLFTSSVVLFSVMWYAISQGVRDGT KDEPVAVFLPTYMLLTMGVNVSFLAGDLFNLYVGFEIFLVASYVLLTLGASPARVRAGVG YVMVSMASSLIFVLALAYIYAAVGTMNMAQIGIRMEDIPAGTRSAVFAVLLIAFGIKAAV FPLDAWLPDSYPTAPSLVTAVFAGLLTKVGVYAIIRARTSIFTAGGLDNLLMWVALATML VGILGAIAQSDIKRLLSFTLVSHIGYMIFGVALGTAQGLSGAIFYAVHHILVQTALFLVV GLIERQAGTSSLRRLGSLIYTAPLIAILYFIPAMNLGGIPPFSGFLGKIMLLQAGANEGS WMSWVLIGGAVITSLLTLYVMVLVWAKGFLRDRGDAPEGNLAMVRPSPLGEVTEYVELAD RDDVGRVPFGMLASTSLLVIASVSMSFLAGPISGVTTRAATSAQDDSIYRYAVLGDSAED PTRHLDPAERYEEGADSRKNRSEPIPDPEPVAPTTRTSPSATPSLPTSESKDEKEASR >gi|227860872|gb|ACLH01000048.1| GENE 26 27450 - 27950 667 166 aa, chain - ## HITS:1 COG:Cgl2673 KEGG:ns NR:ns ## COG: Cgl2673 COG1006 # Protein_GI_number: 19553923 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhC subunit # Organism: Corynebacterium glutamicum # 1 166 1 163 163 213 72.0 2e-55 MDANLMLLLAAGVLCGAGVYLLLDRAMTKMLLGILLLGNGANLFVLMAGGKAGSPPIDGR TSLPYGEEIADPLAQAMILTAIVISMALTGFILTLAYRQYRYRTADVIEDDTEDTAIAAM ASRPGNASAAPDHDASNDPTTGRNTKEGDKFGPEFFEAPVKEATDE >gi|227860872|gb|ACLH01000048.1| GENE 27 27950 - 30865 3325 971 aa, chain - ## HITS:1 COG:Cgl2672_1 KEGG:ns NR:ns ## COG: Cgl2672_1 COG1009 # Protein_GI_number: 19553922 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Corynebacterium glutamicum # 1 524 1 532 532 580 61.0 1e-165 MLTLFSALVITTIAAPFLLFYLGRRAFGLLAVMPAVGFFWVLQQLTTGALRDGNQLAYDL DWMPAAHLTISLRMDALSALFSLIILGVGALVLLYCWGYFDHSRRRLALFGSQMVGFATA MYGLVISDNFLLLYVFWEITSLLSFLLVSYYGERASSRRSAQQALMVTVLGGLAMLVGIT LLGRQTGEWSFSGIAATEDLANTPYLTVAIVLILCGALSKSAIAPAHFWLPGAMAAPTPV SAYLHSAAMVKAGIYLVARLAPSVHDISTWHLVVIPLGAFTMLLGGWMALKQRDLKLVLA YGTVSQLGFITAIIAIGSRETMQAGLALTFAHSLFKAALFMIVGAIDHSTGTRDIDKLAG LGKKKPALYILAILPAMSMAGIPPLLGFVSKEATLEAIMHEELLVGMPRNMLLVTVVVGS ALTMAYALRFLWGAFSSKGQEEPSEAVANMHHIGPFLWIPPTVLTLLTIFFGLLPLPLSH GITQHLDNTFGAKHASELALWHGFTIPLLLSVVIIVAGSLLHWQRQALTKAQFTYPALGS ADDSYDAVINALRQLSLRITASTQRGSLQFNLTVIFATLMVLPIVMLINGDITNVHMIVA ENPWQAIAAVVIIIAAIAATVLDNRLSGVILVGVTGYALSFIFALHGAPDLALTQLLVET IIMVLFMLVLRRMPANTEWKQEPKTGRLRAWLAVGVGLAVTVVGMFAINARREEPISQYM PELAKEIGHGANTVNVLLVDLRAWDTFGEITVLIIAATGIASLIYRTQSFTRSSRRPTLQ VTGRRWLAAGVESEKALNRSLMVDVSTRILFPSMMVLSLYFFFGGHNAPGGGFAGGLVAA LALILRYLAGGREELDEALPLDGGRTMAVGLLLSLSAVITPMLLGYPPLTTGYTKVGVPL IGDVSLPSALIFDAGVYLIVVGLTLYVLSSLGAKLDEEEEMRKQRARDRARSLARRAKGK EATATAEKGHA >gi|227860872|gb|ACLH01000048.1| GENE 28 31094 - 32461 1850 455 aa, chain - ## HITS:1 COG:Cgl2670 KEGG:ns NR:ns ## COG: Cgl2670 COG0624 # Protein_GI_number: 19553920 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Corynebacterium glutamicum # 4 454 10 455 457 480 57.0 1e-135 MTKISEFVSNDRDTIFQQLKELVSFNSVHNEPGLEEQTAKAAEWVHAALVDVGFTPEAIT TADGSTAIVAKRPGKEGAKTVLLYSHYDVVPAGNPEAWDSDPFTLTERDGRWYGRGAADC KGNVAMHLAALRALDANGGTDLNLTVLIEGSEERGGEGLSALIEERPELFAADAILIADA GNAKVGVPTLTTSLRGGSQINVKVSTLHSAVHSGQFGGAAPDAVKALMRALDSLTDEYGR TTIDGVDCAGTWPLAEGQDIAYSEENFRADAQMLEGTEVMGAKVPAGATAIADMIWARPA VTVTGFTSTPVAEAVNAVPATAEANINLRTPATMDPRATAEAVAEHLKKHVPWGAHIEVT ILEANLGFETDPEKPAVALLGECLGEAYGSETITQGMGGSIPLTVELQEKHPNAEIALFG VEEPQCTIHSANESVDPTEIEKIAIAEALFLQRFA >gi|227860872|gb|ACLH01000048.1| GENE 29 32558 - 34531 2701 657 aa, chain + ## HITS:1 COG:MT2465 KEGG:ns NR:ns ## COG: MT2465 COG1297 # Protein_GI_number: 15841909 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 8 656 3 649 667 567 57.0 1e-161 MATTTAEGSQSTLRELTLRGIIIGGLITLIFTAANVYLGLKVGLTFATSIPAAVISMAVL RRFAGHNVKENNIVQTIASAAGTLSAIIFVLPGLVMVGYWQGFSFVDTAAVCAIGGVLGV MYSIPLRRALVTGSDLPYPEGVAAAEVLKVGDSSGEDGEAAHEENAKGLRVIVFGGILSA FMALLAAMKAAASEVATYFKFGSGATTLGTSLSLALVGVGHLVGLAVGIAMLVGVVISYL ILLPILTGGEGLGDPAAIMETVDTVFSDRIRFIGVGTMAIAAVWTLIKITGPIAKGMAES FASSRNRKDGQQVAVEERDIPAPYVIGTILVLMIPIGLLLWNFVRGTDIHDHMGVLITVS VLFTLLVGLVIASVCGYMAGLIGASNSPISSIGIIAVIAAALLIAAVTRGTDAEPLSLVA YTLFTAAIVFGIATISNDNLQDLKTGQLVGATPWKQQVALIIGVLFGSLVIPPILQVMLT GFGFQGMEGAGEDALAAPQAALMSSVASGIFDSSLPWDLIGLGAAIGAVIIIVDECLRHF TDKYSLSPLAVGMGMYLPAAITIVVPIGAFLGYFYNRWAARQSKPDFVKRMGTLLATGLI VGESLFGVVNAGIIAASAGDSPLEIFEGGTAAKFVGVILFVGGIAAAYKWTAKKAAS >gi|227860872|gb|ACLH01000048.1| GENE 30 34823 - 36469 1526 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 546 3 546 547 592 58 1e-168 MAKIIAFDEEARRGLERGLNTLADAVKVTLGPKGRNVVLEKSWGAPTITNDGVSIAREIE LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPMGIKRGIE AATKKVVDSLLSSAKEVETQEEIATTAGISAADPAIGEKIAEAMYTVGNGSVNKDSVITV EESNTFGVDLEVTEGMRFDKGYISGYFATDMERQEAVLEDPYILLVSSKVSNIKDLVPLL EKVMQTGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKATLQDMAILTG GQVISEEVGLSLETAEIEYLGQARKVVVTKDETTIVQGAGSQEQIDGRIKQIRAEIENSD SDYDREKLQERLAKLAGGVAVLKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGV ALLQAAEVLDSLSDLTGDEATGVKIVREALSAPLKQIAQNAGLEPGVVADKVASLPAGQG LNAASGEYVDLMAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEPAGAGAGMPDA DAMGGMGF >gi|227860872|gb|ACLH01000048.1| GENE 31 36789 - 37073 63 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKGYRLLERKTLRNVVSFPLLIPVAFLKAQLERFLNCALRWREGDGALEYGLPRFRIGE TCGPKELDLLSSCVKILLVTPTEGVCKLQTPLGH >gi|227860872|gb|ACLH01000048.1| GENE 32 37105 - 37296 380 63 aa, chain + ## HITS:1 COG:no KEGG:cauri_2262 NR:ns ## KEGG: cauri_2262 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 115 100.0 7e-25 MDLSLVQTHLDNFVNTWEGWGKIAANLPTVLNNAVDIFFGLQGGEYEVGDAFSNTSSALL SSK >gi|227860872|gb|ACLH01000048.1| GENE 33 37344 - 37478 265 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSVLFDAFNLSSAIALDFSGIAAIMQPLVQVAKGASQLIGMFV >gi|227860872|gb|ACLH01000048.1| GENE 34 37633 - 38532 1404 299 aa, chain + ## HITS:1 COG:Cgl2657 KEGG:ns NR:ns ## COG: Cgl2657 COG2326 # Protein_GI_number: 19553907 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 299 8 306 306 523 87.0 1e-148 MADIKDDELPEIDLAQTDGYVVDDSDEDDPSLIMPDGSPVETWRENYPYEERMTRDEYES IKRALQIELLKWQNWTKETGQRHIILFEGRDAAGKGGTIKRFNEHLNPRGARTVALEKPS PRESTSWYFQRYIQHFPSGGEIVFFDRSWYNRSGVERVMGFCTESQHAEFLREVPMLENM LLGSGISLTKLWFSVTRKEQRTRFAIRQIDPVRQWKLSPMDLASLDKWDDYTRAKEEQFR YTDTEESPWITIKSNDKKRARINAMRYVLSKFEYTNKDHELVDQVDDKIVKRGRDQIGD >gi|227860872|gb|ACLH01000048.1| GENE 35 38638 - 42615 4663 1325 aa, chain - ## HITS:1 COG:Cgl2655_1 KEGG:ns NR:ns ## COG: Cgl2655_1 COG1020 # Protein_GI_number: 19553905 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Corynebacterium glutamicum # 25 658 2 629 636 865 71.0 0 MTEPDNLPSTGGRHALRTDEPEAPAMPEVPEHYLLGSEAAPARTLWDIVQTTAEHYPDAA ALDEGEILTYAELLADVSAWATELYASGVRRGDRIGIRMTSGKRELYLAILATLAAGAAY VPVDADDPDERAEMVFGEADIDGVFTDEGFRMLREGGAARPTFDEKDERDGAPFEEPRPE DTAWIIFTSGSTGKPKGVAVSHRSAAAFVDAEAALFLVDSPHGPLGPDDRVLAGLSVAFD ASCEEMWLAWGHGACLVPAPRSLVRSGMDLGPWLIRRDITVVSTVPTLAGLWPAEALDNI RLLIVGGEACSQELTDRLATEDREMWNTYGPTEATVVACAQRMLPGKPVSIGLPLKGWDL VVVDKHGVPVNIGEVGELVIGGVGLAAYLDPVKDAEKYAPLESMGWERAYRTGDHVRLEE DGLYFVGRVDDQVKIGGRRIELGEVEANVAALPNVYNSAVAVQKTPGGESVLVGYVSLDD PDAGFDHEAAHARLAETMPAALVPRICVMEELPIRTSGKVDKKALPWPLPGVGVEADGLN PTEQWLAELWVDTLGVSVEDVNADFFSLGGTSLAAATLVGRIRERFPTVAVRDLYDHPRL GSLAEQLAGAESVEDAGPAREVKPVGAGTRIAQTLIQIPVMTLAATTWLAWLLLSSNLAN LLGVEWAMTTPWWLVILLLVIFVTPIGRIPIGGFGARLITAGIQPGDYPRGGSTHLRIWA AERWADASGSRSIAGATWVNNYARALGVKMGRGVDLHSLPPVTGLLTLGKHAAIEPEVDL SGYWLDGDILRVGAIEVKEGARVGARSTLLPGTVVGKDAHVEAGSTVTARKKIKDGQRWS GSPAKKVGRSKHRFPSHAPKRRPWWVAIYGATSILLAFQPIVALAVGAAVVVALIALTEG SAFVGSIFFAPLGALAAFATFMLQTWLGVRILSLGIKPGVAPVRSAKGWRLWAIERLMDE ARTQLFPIYASQLTPAWLRSLGATIGKDVEISTAVMVPKLTEVKDGAFLADDTMIGGYEL GGGWMLTGETKVGKRSFVGNSGITGPGRKLSKNSLVAVLSSTPKKTKSGANWWGSPPERM RRVEAHVDGVEGESLTYNPGFGVKAARGAIETMRLLAPMTSAMLLAGTLASLYALADALG IAAAWALGGLILMVAGAIAMTITVAVKWICVGTQTAGDHPLWSAFVWLNELQDTFVEAVA APWFFSHTYGMGEINQGLRALGVTIGRGAWIDSYWFPETDLCFVGEGASVGPGTVVQTHL FQDRVMSLDTVTIKAGATLGSHSVALPASVIGSVATVGPGSLVMRGDQVPGSSEWQGNPI EPWKH >gi|227860872|gb|ACLH01000048.1| GENE 36 42616 - 43092 562 158 aa, chain - ## HITS:1 COG:Cgl2654 KEGG:ns NR:ns ## COG: Cgl2654 COG1846 # Protein_GI_number: 19553904 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 9 148 7 146 148 154 70.0 7e-38 MPSLNSVSIPTSLLESPSFQLERLRRRTREGVEAALQTQKTTLREYWVLTCLVAETASSQ SALSETLAIDASDMVRLLDSLESRNWVKRERDAKDRRRQIIASTKKGVKAHKELTVLVAK AEDEALDASTNKQLKHLRKLATAIIAADAPADAESSDA >gi|227860872|gb|ACLH01000048.1| GENE 37 43153 - 43482 187 109 aa, chain - ## HITS:1 COG:no KEGG:cauri_2257 NR:ns ## KEGG: cauri_2257 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 109 1 109 109 194 100.0 1e-48 MNLADKYTYQTAWSEEDGEFVATVLEFPSLSWLDTTAATAEAELRSVVEETLEDMQRNNE RIPEPFGQRSFSGKFNLRIPQSLHRDLTIEAEREGVSLNTLIVQKLASA >gi|227860872|gb|ACLH01000048.1| GENE 38 43492 - 43719 118 75 aa, chain - ## HITS:1 COG:no KEGG:Glov_2138 NR:ns ## KEGG: Glov_2138 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 1 74 11 78 87 78 55.0 9e-14 MRTSRTNVRFSELQLVCDFYFERQESAGNKRRGTSHVVYKTPWQGDPRVNIQEGRNGKAK PFQIRQVLAAIDRLP >gi|227860872|gb|ACLH01000048.1| GENE 39 43780 - 44082 346 100 aa, chain - ## HITS:1 COG:Cgl2653 KEGG:ns NR:ns ## COG: Cgl2653 COG0607 # Protein_GI_number: 19553903 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Corynebacterium glutamicum # 1 94 1 93 96 110 61.0 7e-25 MQNVQPTEVPENAQLIDVREDHEWNTEHAQGATHIPMGDLVERLDEIDPDRDIYVICHAG GRSMQVCQYLEQAKGWDVINVEGGTDGWKAQGCPMVYPNH >gi|227860872|gb|ACLH01000048.1| GENE 40 44185 - 46821 1771 878 aa, chain + ## HITS:1 COG:Cgl0970_2 KEGG:ns NR:ns ## COG: Cgl0970_2 COG0147 # Protein_GI_number: 19552220 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Corynebacterium glutamicum # 290 637 71 420 420 319 50.0 2e-86 MNSSTVALIPGDPSGRFFGSRVLVVDNFDSFTFNIVDYLVRLGAEVTVTPNTEPVPLTGY HAVVLSPGPGTPERAADIGFCAEVLKRAAVPVLGVCLGFQAMAQHLGARIVLAPKPVHGL VSSIHCAEDPLYAGIPSCHDVVRYHSLVVDELPAGMKALAHTAEGLIMAGCSEERRWWGV QYHPESICSDHGLRLFENFLAIACPEAIEAAATASTAGTTPAASLPSLHVEERHLTIDPL DVFDVLGGKGALLEFEGTSLIAPLGESVGLEALAEPPRFSRPAGCLGVPGVFGFLGYEAL GGLPTPHPHGLFRTLGVVAIQGQRVQLICEDSAASWLAQTWRLLERLAGHPVQQRRIDTS TISPLSCRDTAAAYKEKIRRAQELISAGETYEVCLTTSLEAAADLDPLALYQRLRQQVPA PMRSLLVLPELAVASASPERFLKVSGGVVCSEPIKGTRPRGHNPTADEQLRADLASNPKD HAENLMIVDLVRNDLTRVGIPGTVHAEELFVVRSFATVHQLVSTVSARLCPDASLIDVLR STFPGGSMTGAPKVRTMEIIRELEAAPRGVYSGAIGYLGCDGSADFAMTIRSIVLHSGRL HYGVGGAVLALSDPDAEWQEIVDKSAPLLKLCGQAFPGEHCYRFEAGELLPVPSLPEPVL IDSFRLEEGQVRGFELHCERFTAGTEALGMDSPRSFLHAVQEHLPARGRWFPRLEAGPSG FALRLRPLPEQRKTTRLHSATATVEYPHVKGPNLVLFSELREQDDTLLISDEGVVCETTT AALIAWDGDTMLTMDAPRLRSVTESLLVAAVGEEGSVEKRKLGLSDLAGLELWTLNALHG ITPVVQLDGKPQPAPDAARLEHWRSVLDSMCATIPRTQ >gi|227860872|gb|ACLH01000048.1| GENE 41 46879 - 47535 776 218 aa, chain - ## HITS:1 COG:CAC2254 KEGG:ns NR:ns ## COG: CAC2254 COG2197 # Protein_GI_number: 15895522 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 3 198 2 198 213 97 32.0 2e-20 MSLRIVVADDSAILREGLAGLLERRGHSIVGQADSAPALEAVVDKLRDELPDIVITDVRM PPGMGDDGLKAAVNLRNAYPGLPVMVLSQYVAPAYAVELFDSPDAGTGYLLKDRVSEVRD FLSSLDVVAQGGTVIDPTVAQALMSSGRSGLGELTPREREVLELMSRGKSNKDIAAELVL SSAAVAKHVSNIFTKLRLDPSEDNRRVKAILEYLSAHR >gi|227860872|gb|ACLH01000048.1| GENE 42 47539 - 48243 507 234 aa, chain - ## HITS:1 COG:RSc0289_2 KEGG:ns NR:ns ## COG: RSc0289_2 COG4585 # Protein_GI_number: 17545008 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 17 233 12 253 270 81 29.0 1e-15 MLKAVFRRKPQPTNHEQQQAQKIAQLTASRRAIADAYEVERARIERDLHDGAQQYLVAAS MKLGEALLDAPSEIAELLTAAKQDVDRGLHSLRATVHGIHPQVLQDHGLVAALADVSSSH GPHVSVFAPHPLPKLSASVLACGYFFGTEALTNAAKHAPGAPVSVLVTADASLKITVVDE GPGGAQVLQGHGLAGMAERLAAFGGEMTLSSPPGGPTRLACSIPLLLDRGQSGV >gi|227860872|gb|ACLH01000048.1| GENE 43 48312 - 49028 287 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 29 230 20 221 223 115 32 8e-25 MRALHGEMRDMAQTLSLTDITKDFGGGPVLAGISLDVETGELVAVMGPSGSGKSTLLHCM SGVLTPTHGSVRYGDEELSALGDGPRSRLRLRNFGFVFQDGQLLPELSNVDNVALPAMLN GASRGAARKRAMELLDQLGLGGLAERRPAQVSGGQAQRVTIARALVASPGVVFADEPTGA LDQSTGHEVMQMLTTIVRQSGASLVMVTHDPKVADWMQRRVEIRDGIIHDDRRLEVIR >gi|227860872|gb|ACLH01000048.1| GENE 44 49025 - 50425 1426 466 aa, chain + ## HITS:1 COG:no KEGG:cauri_2251 NR:ns ## KEGG: cauri_2251 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 466 1 466 466 794 100.0 0 MNTATLVFDLQRESIRARSGTGIVSLLAIVSLTIGSAIAFLVAGGTWMFWERAQHVEEAA PTLQEAFGNEMEAFLYPWFALALLACAFILPALFNLTAQAAVLGASGREQRLATLRLLGL SSRQVERMVIVETGLQAIIGIVLGGLISLLVAPVFTQVDFQMRSIAVSEILLPWWGYLAV AGVLFLLAIGAALAGMQRVRVSPLGVAKRQMPAAYRWWRVIVFLIIAGIGGVLLSGKAGP PTAMVIVVMFGMVMSINLISPFILQLGAHIMSLFPGNAHFVACQRVAGNARPAWKRSAAI GFFGYLTGFLVAAPLGSDALAMVLKEDPGMNVVFKDISTGVLLTLIFGFTLTTMSIILGQ VSGIFEDKELIRSLDLMGVPRGFQFRSGALTIMGPVVGLSFFGFLFGGSIAALMFFSSVE QSNVDVLGRMLMAFGFLAVGWLVTLLAIVLVEPLRGYVLRTGGRKE >gi|227860872|gb|ACLH01000048.1| GENE 45 50422 - 51354 1085 310 aa, chain + ## HITS:1 COG:no KEGG:cauri_2250 NR:ns ## KEGG: cauri_2250 # Name: not_defined # Def: putative nisin-resistance protein # Organism: C.aurimucosum # Pathway: not_defined # 1 310 1 310 310 518 100.0 1e-145 MKTVLKIFGGLFLVALIAVAAAVYFFGPSYGGALLGKPYFLFNASEKRINTAMVDTAAIS GIYGESEEFQRAREAFKEDPTNAELLDAAINAAGGKHSNVFSTEKEKAAESTEPSVDFKD GVLRAAVPSIGRHDDGQAYADTLAQGLTAHPEACAAVVDLRGNGGGDMGPMYAGLSPLLP DGTALSFVSRMGTSDVVIDGNSVTGGGTPTTTSGGKLDVPVAVLTDDETASSGEATLLAF RGLDNVRTFGEPTAGYASANVVLDYPDGRSLMLTTAKDKARTGEEFAEDPIAPDASESEL DGWLASHCSS >gi|227860872|gb|ACLH01000048.1| GENE 46 51388 - 51897 460 169 aa, chain - ## HITS:1 COG:no KEGG:cauri_2249 NR:ns ## KEGG: cauri_2249 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 169 109 277 277 343 100.0 1e-93 MAQEDAVAFIEAFFAGPHGRSRIETEQLDFRRLPKHTREVLEKAIVGADSKPERDLTRGL EPHVKVRNNVRVGPYRWDLLLEEHKVAIEVDGYAYHKGENRQRFEIDRQKLNDAIQRGYR PLHFTAATIEHHLDVAVHQVLAVIKGRGEFIPPPWKWHHYWRWEGERCG >gi|227860872|gb|ACLH01000048.1| GENE 47 51830 - 52021 65 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRERPCGPAKKASMKATASSCAIASIHCSGLQTFTPFMLPSALGRARLLRKYVLDAIVPA RRK >gi|227860872|gb|ACLH01000048.1| GENE 48 52417 - 52890 799 157 aa, chain - ## HITS:1 COG:Cgl2644 KEGG:ns NR:ns ## COG: Cgl2644 COG0221 # Protein_GI_number: 19553894 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Corynebacterium glutamicum # 1 157 1 157 158 241 78.0 6e-64 MSVEVTIEIPKGSRNKYEIDHETGKVHLDRYLFTPMAYPADYGFIDHTLGEDGDPLDALV ILPEPVFPGVVVEARVLGVFKMTDEAGGDDKLLAVVDDPRWERYQDINDVEQHIKDEIEH FFTRYKDLEPNKEVTGSGWGDKAEAEKILEEAKARFK >gi|227860872|gb|ACLH01000048.1| GENE 49 52960 - 54246 1604 428 aa, chain + ## HITS:1 COG:Cgl2643 KEGG:ns NR:ns ## COG: Cgl2643 COG2027 # Protein_GI_number: 19553893 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Corynebacterium glutamicum # 4 428 2 427 427 280 43.0 3e-75 MKAKHVWWSTAALVTAGAVAATAAVGVEVQRTYDHLDHGQPYKQEEPTTLVQPVEPGDID AAALKARLDELGKDKALATFGGQVIDTTTHEVLWEREPAKPLTPASATKVLTLAAATLAL DEEERLTTEVVTGEHEGEVVIKATGDVWLTDERLDELAEQIQQKMDTVTRVSIDTSIWAG PDQAPGWDDDNIDGGYVAPIQPAMLYGGRIGEKTGDVPRSREPALDVARALATRLGTDKA DIAASPENSEVIATTESEPLALRAQQAAKDSDNVMAEAIARELAVSQGTEASFEGATTAI LDELRGAGIDVNGVTLKDGSGLSRDNRIPAGLLAHIADQAVGTDELRPLLGYLPLAGGEG TLYERYHESPARGYVRAKTGTLTGTSALTGTAQGQSGRVYAFAFLVNDGEVTSARQAQDA LAAALHDF >gi|227860872|gb|ACLH01000048.1| GENE 50 54215 - 55189 539 324 aa, chain + ## HITS:1 COG:Cgl2642 KEGG:ns NR:ns ## COG: Cgl2642 COG0037 # Protein_GI_number: 19553892 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Corynebacterium glutamicum # 16 312 11 312 314 209 46.0 4e-54 MLSPLRSMTSKKPFWPRTSPNFLACRVAARAVVGEQPRAIAVGLSGGADSLALTAALLAE GHDVTALCVDHGLQEGSAAQARRAAEQARALGAGAEVLRVDVGKQGSVEAEARAARYRAF APWGEVAVAHTADDQAETLLLSVLRGKVAGMRERSAVEGVHVLRPLLSVRRAQTETACAE LGLEVWQDPQNQDASFRRVALRREILPRLQEIVGGDPVPALAQAAHDAALDDALLSTHPT TDCTALAALPEPKRRRAIAAWLREEGVEVTREAVRGIDALCTRWHGQGPVAVRSEKRGTR LEVARVGGKLSLLPRSAKERSRAR >gi|227860872|gb|ACLH01000048.1| GENE 51 55179 - 55766 766 195 aa, chain + ## HITS:1 COG:Cgl2641 KEGG:ns NR:ns ## COG: Cgl2641 COG0634 # Protein_GI_number: 19553891 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 1 194 7 200 200 270 74.0 1e-72 MHDNHDLAVPANPYGEDIKNVLITEDDLQARIQEMADRVSEKYSNTDEDLILVCVLKGAV FFLTDFARKLAIPSQLEFMAVSSYGNSASSSGVVRILKDLDRDIEGRDVVIVEDIIDSGL TLSWLIRNLQGRQPRSLEVVTLLRKPEVVKAELDLFDVGFDIPNEFVVGYGLDFAERYRD LPYVGTLEPAVYSND >gi|227860872|gb|ACLH01000048.1| GENE 52 55816 - 58272 3483 818 aa, chain + ## HITS:1 COG:Cgl2640 KEGG:ns NR:ns ## COG: Cgl2640 COG0465 # Protein_GI_number: 19553890 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Zn proteases # Organism: Corynebacterium glutamicum # 1 670 1 668 853 966 76.0 0 MKNKNIIRYGSIAGLVLILLYAFTFFSNDARSFKQVDTSVAMEQLSSKNVEEAQIDDREQ QVRLKLREPVTVEEQEGIEEVIAKYPARASEQVFNAVKDSGADKYQTKVTQDSFIGSMIS FLLPMLILFALLFWMMTRMQQGAGGMFGIGGSKAKELTKDMPTNTFADVAGADEAVDELQ EIKDFLDDPERYHELGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMF VGVGASRVRDLFKQAKQNSPCIIFVDEIDAVGRQRGSGTGGGHDEREQTLNQLLVEMDGF GDREGVILIAATNRPDILDPALLRPGRFDRQIPVTNPDLAGREQILRVHAKDKPLAKEVD VAQLAKRTAGMSGADLANVLNEAALLTARIGGNVITYDALEEATDRVVGGPRRQGKIISE HEKKVTAYHEGGHTLSAWALKDIERVYKVTILARGRTGGHAMTAQEDDKGMYTRDELFAR LVFAMGGRAAEELVFGAPTTGASSDIEQATKIARSMITEYGFSPDLGTVKYGKEQGDPFA YAAGGGSIDYSDAVAAKIDEQMAYLLDRAHQQAYDILSEHRDYLDKLAEMLLEKETLRRP DLEGIFEGIEPREAFDVFPNEDDRFPRQAGREPVKTPVELAQERGEELPKRMTLLDASRA ARERRQAELERAKENGDETAAATAAAPVEEIGFSFGQHAGDYVDPEKGNTFFGESDITEP TGRELSADEAASDGAQEETVAPEQAGPSHEDTQEIPRVPNAAAPQPESQPQPEPQPQPRE PERRGRHAKPEGHSWGAPGWGENEYRNNPYKDGQNNER >gi|227860872|gb|ACLH01000048.1| GENE 53 58262 - 58852 793 196 aa, chain + ## HITS:1 COG:Cgl2639 KEGG:ns NR:ns ## COG: Cgl2639 COG0302 # Protein_GI_number: 19553889 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Corynebacterium glutamicum # 3 195 7 199 201 305 83.0 5e-83 MSDNIPAQREFDHERAEAAVRELLIAVGEDPDREGLRETPARVARAYAEVFAGLHQDPTE VLHKTFAEEHQELVLVRDIPIYSTCEHHLVPFYGTAHIGYIPGTDGHVTGLSKLARLADM YAKRPQVQERLTSQIADALVEVLHAQSVIVVIECEHLCMAMRGIRKPGATTTTSAVRGGF KKNAASRAEVMSLIRS >gi|227860872|gb|ACLH01000048.1| GENE 54 58858 - 59787 1088 309 aa, chain + ## HITS:1 COG:Cgl2638 KEGG:ns NR:ns ## COG: Cgl2638 COG0294 # Protein_GI_number: 19553888 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Corynebacterium glutamicum # 1 284 1 284 284 340 71.0 2e-93 MAVSDLTVPGRTLVMGIVNVTEDSFSDGGRWINIDDALNHARHLVACGADMIDVGGESTR PGAVRVAAEEEERRVVPVIKALREEGIKTSVDTMRASVAQAAAEAGVDMINDVSGGAADP DMYRTMAATGLPVCLMHWRTVQFGSAAGVADHGGDVVRDVHESLAKLADNALQAGVSHDN IVVDPGLGFAKSPQDNWALLKALPEFLQGEFPLLVGASRKRFLAAIREDRGAESSPLLAD PATAAVTAISAQMGAWGVRVHEVEVSRDAVDVAAAWNAGAAYTGGAHASGSYANGADGGT VVSTSLGKA >gi|227860872|gb|ACLH01000048.1| GENE 55 59791 - 60162 172 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 3 120 2 121 278 70 31 5e-32 MADRIELTGLECFGYHGVFEEEKKTGQPFIVDITCWLDTAGIEDDLSRTVNYAELADVAA DIVEGPSRDLIETVAEEVAETAMQRFEILHAIEVTIHKPKAPIPRTFADVAVVARRSRKR MAG >gi|227860872|gb|ACLH01000048.1| GENE 56 60162 - 60632 634 156 aa, chain + ## HITS:1 COG:Cgl2636 KEGG:ns NR:ns ## COG: Cgl2636 COG0801 # Protein_GI_number: 19553886 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Corynebacterium glutamicum # 1 155 1 159 159 192 66.0 2e-49 MRAVLSIGSNMEDRRALLQTVFDEFAAETVAASPVFATPPWGVTDQDEFLNAVLIVDVEC TPLELLRRGQKLEEAAERVRVRHWGPRTLDVDIVQIDGVTSDDPELTLPHPYAHERAFVL VPWLAADEHARLNGTPVRELIAGLDEDEVAAVKEVG >gi|227860872|gb|ACLH01000048.1| GENE 57 60636 - 61109 381 157 aa, chain + ## HITS:1 COG:no KEGG:cauri_2239 NR:ns ## KEGG: cauri_2239 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 1 157 157 238 100.0 5e-62 MKRTSIGALVGVALFVAAAAAILTTRFYGSMLAIPATVSISLWAMAVVCGVLTLKVRNAK NDEHGIGLDNSQLNPMTIAQFLLVGKASAWTGAIVGGAYAGIAVYVVPRAGELVAAAGDL AGVVSSALGGAAMCVAGVVLERHCEVPPPTDAAQAVS >gi|227860872|gb|ACLH01000048.1| GENE 58 61115 - 62428 1282 437 aa, chain + ## HITS:1 COG:no KEGG:cauri_2238 NR:ns ## KEGG: cauri_2238 # Name: not_defined # Def: zinc metalloprotease (EC:3.4.24.-) # Organism: C.aurimucosum # Pathway: not_defined # 1 437 1 437 437 549 100.0 1e-154 MTSPHYAPEPQHESAPDDHPTTQFSAQLDSQPPTSAETSEISESGSKTDAGSIGLIVLVI LAVIASLVMLISGSANALKIALLASLWAAVLGFFLVVRYRRQAHEAKELLAVERAHAAST VTASGASTTDNSQVLAEIRSELEAIRAQIEEISGREWVYEPAALYAEARRIQELERKAGG AGVDERGDAPNVNFTQKSGGAPSADAVAGRLGTQPTHPVSNPLDNLLADNARGNAQQPAP KPAAKPAQQPTPKPAAKPTERPSAKPAGKPADQQGTRPAPSSFGAPQPSQHRPPAFRPMG EPQQKPQQKPQAPQPQPQAEKPQPKAEQPQARAEQKPQQSQPKAQSKPQPKAPEFKTDSF QAVQWNQGAAGAQHVKEDAGAAQQPHHRHRKPDVDSAQPDTRGRRRSDERREGAVSVAEL MARSKRRKEQQNKGDKK >gi|227860872|gb|ACLH01000048.1| GENE 59 62429 - 63077 692 216 aa, chain + ## HITS:1 COG:no KEGG:cauri_2237 NR:ns ## KEGG: cauri_2237 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 216 1 216 225 383 100.0 1e-105 MQAPRMRVAVWGNSRAGRNFAQRLEWAGHTVESLEDPAQLDRFDALIIAATARELEAAVG DVAKHVRPRQIVIHTSLLAGVEALDDLETRGCVTIAAAPLGDSYAVGTLDEVAETVIGLL LSEISQSAETVPEEQRAERAARLYYAEMLGALSVWAAIKAGIIENFMGSAFDLDAGDIID SYPAAVELGMARNYRDVARMVGEQEKIEELELWAVR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:30:58 2011 Seq name: gi|227860871|gb|ACLH01000049.1| Corynebacterium aurimucosum ATCC 700975 contig00111, whole genome shotgun sequence Length of sequence - 39703 bp Number of predicted genes - 39, with homology - 38 Number of transcription units - 22, operones - 6 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 720 743 ## COG0414 Panthothenate synthetase 2 1 Op 2 . + CDS 761 - 1708 836 ## COG1893 Ketopantoate reductase + Term 1710 - 1763 -0.8 3 2 Tu 1 . - CDS 1738 - 3834 3104 ## COG3211 Predicted phosphatase + Prom 3794 - 3853 1.8 4 3 Tu 1 . + CDS 4006 - 5580 2039 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 5606 - 5656 13.1 5 4 Tu 1 . + CDS 5723 - 6667 611 ## cauri_2232 putative secreted protein + Prom 6712 - 6771 2.1 6 5 Tu 1 . + CDS 6826 - 8238 1441 ## COG0477 Permeases of the major facilitator superfamily 7 6 Tu 1 . - CDS 8246 - 9502 1039 ## cauri_2230 putative serine/threonine protein kinase - Prom 9552 - 9611 3.1 8 7 Tu 1 . + CDS 9749 - 12529 2517 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 12568 - 12621 22.5 9 8 Op 1 . - CDS 12683 - 13573 882 ## COG1230 Co/Zn/Cd efflux system component 10 8 Op 2 . - CDS 13650 - 14510 799 ## cauri_2227 hypothetical protein 11 8 Op 3 . - CDS 14510 - 15070 333 ## cauri_2226 hypothetical protein - Prom 15227 - 15286 2.7 12 9 Tu 1 . + CDS 15203 - 16036 371 ## cauri_2225 hypothetical protein 13 10 Tu 1 . - CDS 16040 - 17266 1265 ## cauri_2224 putative secretory lipase 14 11 Op 1 . + CDS 17329 - 17499 258 ## cauri_2223 hypothetical protein 15 11 Op 2 . + CDS 17499 - 18815 1213 ## COG2966 Uncharacterized conserved protein + Term 18953 - 18984 -0.9 16 12 Tu 1 . - CDS 18781 - 19641 620 ## COG1194 A/G-specific DNA glycosylase 17 13 Tu 1 . + CDS 19683 - 20306 651 ## COG0288 Carbonic anhydrase 18 14 Tu 1 . + CDS 20414 - 21154 894 ## cauri_2219 hypothetical protein + Term 21384 - 21419 3.2 19 15 Tu 1 . - CDS 21141 - 22523 1297 ## COG1066 Predicted ATP-dependent serine protease 20 16 Tu 1 . - CDS 22640 - 23257 805 ## cauri_2217 putative secreted protein + Prom 23369 - 23428 3.3 21 17 Op 1 5/0.000 + CDS 23504 - 24088 799 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD 22 17 Op 2 19/0.000 + CDS 24060 - 24821 303 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 23 17 Op 3 2/0.143 + CDS 24814 - 25296 361 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 24 17 Op 4 7/0.000 + CDS 25344 - 26765 1656 ## COG0215 Cysteinyl-tRNA synthetase 25 17 Op 5 . + CDS 26807 - 27757 1250 ## COG0566 rRNA methylases 26 17 Op 6 1/0.429 + CDS 27776 - 28510 632 ## COG3910 Predicted ATPase 27 17 Op 7 . + CDS 28507 - 29157 447 ## COG3910 Predicted ATPase + Prom 29384 - 29443 1.9 28 18 Tu 1 . + CDS 29500 - 29562 78 ## - Term 29637 - 29675 -0.8 29 19 Op 1 . - CDS 29778 - 30617 876 ## COG3509 Poly(3-hydroxybutyrate) depolymerase 30 19 Op 2 42/0.000 - CDS 30627 - 31589 1021 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 31 19 Op 3 25/0.000 - CDS 31567 - 32268 742 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 32 19 Op 4 . - CDS 32269 - 33336 1222 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 33366 - 33425 2.8 33 20 Tu 1 . + CDS 33367 - 34494 1143 ## COG1609 Transcriptional regulators + Term 34496 - 34534 3.5 34 21 Op 1 . - CDS 34491 - 35234 782 ## COG1877 Trehalose-6-phosphatase 35 21 Op 2 . - CDS 35266 - 35790 350 ## cauri_2203 putative secreted protein 36 21 Op 3 . - CDS 35787 - 37208 1719 ## COG0380 Trehalose-6-phosphate synthase 37 21 Op 4 . - CDS 37211 - 37570 348 ## cauri_2201 hypothetical protein 38 21 Op 5 . - CDS 37621 - 39297 1651 ## COG2966 Uncharacterized conserved protein - Prom 39500 - 39559 79.6 + TRNA 39483 - 39558 81.7 # Thr TGT 0 0 39 22 Tu 1 . - CDS 39598 - 39702 75 ## cauri_2199 transcriptional regulator protein, TetR family Predicted protein(s) >gi|227860871|gb|ACLH01000049.1| GENE 1 1 - 720 743 239 aa, chain + ## HITS:1 COG:Cgl2632 KEGG:ns NR:ns ## COG: Cgl2632 COG0414 # Protein_GI_number: 19553882 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Corynebacterium glutamicum # 1 236 23 265 266 189 49.0 3e-48 AYRKTGKRVVLVPLGRDIHAGHLALVQAAQRVRGGIVVVAVDPETDISALDGVDVVWRYG EQSQRTRVLAPDHGMEDVSAELTRIVALTCALGPSDVFMGEKDYELLVATQQAFTDLHIA ARVQGVPSVRMPDGVVMSLRNADVAPEAREQASALSAALTAGAYAAESGAEEVVRVAREV LAAAGVEPEYVELRGRDLGEPPAEGDARLFIAATIGGVRLIDNAGVPLGIGFRNLEQRG >gi|227860871|gb|ACLH01000049.1| GENE 2 761 - 1708 836 315 aa, chain + ## HITS:1 COG:Cgl1065 KEGG:ns NR:ns ## COG: Cgl1065 COG1893 # Protein_GI_number: 19552315 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Corynebacterium glutamicum # 1 303 1 286 300 187 42.0 3e-47 MKIGILGAGAIGGYFGGKLKAAGHDVAFVARGETLRVLGETGVTLIDAHAEPASTEVIKV PAAQTFAEVKKLLGGLDVAIIASKALPGNETFGSAEDREALQGIPVVTTHNSVEIPYLAA EEFGEENILAGVARVYATRLGPAQIKRNPGPLALAFGPLSANAPESLRRTGEELAAALKE AGASSKFHDAALVDVWSKAMFVTPTGTLGALADKPIGYLCQEIPGQLEAFMREVEAVGRA LGVELPENVVEQTMEFARQQHPDSTSSMQRDIKEGLPNELDAQVGAIRRMGVKAGVATPL WDFAQEVLEAQLRTA >gi|227860871|gb|ACLH01000049.1| GENE 3 1738 - 3834 3104 698 aa, chain - ## HITS:1 COG:SMc02634 KEGG:ns NR:ns ## COG: SMc02634 COG3211 # Protein_GI_number: 15964842 # Func_class: R General function prediction only # Function: Predicted phosphatase # Organism: Sinorhizobium meliloti # 36 696 29 667 667 424 40.0 1e-118 MALNGRNLLANMFTSSRSSLTCTYKCGNACFGECENTSDNPYFGDQFPRRTALRAGGLAV VAVGGSSALAACAAPDDNGSAAGGSSNKTSEVKGSDIELTSAEGMHFEAVDANTKDEVVI PKGYEQTVLIAWGDPVIEGAPEFDVNNQTAADAEKQFGFNNDFAGLIEHPDDKNRMIYMC SHEYTTEPMMFPNYDPENPTEEQVKIGWAGHGHTILEVSKVKGSGELKREFGPLNRRITA TTPFTLVGPAKGTDLVKTSADPKGEKVLGTLNNCSGGVTPWNTMLSGEENFDQYFAGGDI KDEKAAESLKRFGIEEGPSDRKWEKYDDRFDVTKEPNEPNRFGWLVEINPLDPKSTPIKH TAVGRFKHEAGNIHITKDGTVVCYSGDDSRFEYVYKFVSSKKYKEGDLEHNMTILDHGTL YVAKMEGNSPEKEIDGSGVLPEDGAFDGSGEWVKLLTSDTENNKFESHVDGMSAEEVAVF TREAADKVGATKMDRPEDVEVHPETEKVYIALTNNKYRGATGENAKKNKEDAKEWAPVKE NKNGLVMELEDDHAGEKFTWNLFLVCGDPREASTYFGGFDKEKVSPISCPDNLAFDNHGN LWISTDGNALDSNDGLYAVTTEGETRGELKCFLTVPAGAETCGPIVDDDRVMVNVQHPGE ADDATFENATSHWPDGGKSTPRPAVVVVWKKDGKIGTE >gi|227860871|gb|ACLH01000049.1| GENE 4 4006 - 5580 2039 524 aa, chain + ## HITS:1 COG:Cgl2631 KEGG:ns NR:ns ## COG: Cgl2631 COG1190 # Protein_GI_number: 19553881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 11 524 14 525 526 805 79.0 0 MSEKKNTEVTDVPEQLRIRREKRARLLESGTEPYPVTVDRTISLRDLRQQFQVVAEGEEP AAEEGVTYLSAGEETDVEVAIAGRLIFMRNTGKLCFATLQDGDGTQVQAMLSLAEVGEER LAAWKSDVDLGDFISVRGRVIASRRGELSVMASEWTMAAKSLRPLPVSFADMNEETRVRQ RYNDLIVREEARKNAMTRVKVMRALRNYLEDQGFMEIETPMLQTLHGGAAARPFVTHSNA LDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDRSHSPEFAMLETYEAWGDYND CARTIRESIQSVARAVFGSTTVTLADGTEYDFGGEEWPEIEMYPSLNEALQRKFPGQPEV TIDSTVEELKALADVIGLDVPKNGGWGHGKLVEEIWEVLCEDQLEGPIFVKNFPVETSPL TRQHRSQPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDEEAMVLDED FLAAMEQGMPPTAGAGMGMDRLLMALTGLGIRETVLFPIVKPEH >gi|227860871|gb|ACLH01000049.1| GENE 5 5723 - 6667 611 314 aa, chain + ## HITS:1 COG:no KEGG:cauri_2232 NR:ns ## KEGG: cauri_2232 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 314 20 333 333 578 100.0 1e-163 MKKLLSILSASLMACAVASCSSTSEPASDEPQFQQNSASSASSESASSSSTEAAASSSAK PDKDKPGGLKERDPQDFMTGGDLATIPNPIPAVKSPDGRVLCLIHEEADAPNCKVEFADP PIYPGPVMQSWRANAVSYLGDRGFFPVWAIEFYTPTEVATLNEGETVSFDGGTFEALSGN KFVVKANGHHFTVEDDGQYYSDTFPAKPDANGMANTGAVCGESGTRGEETGLVYVQEDGT DCNDAMELLDEYANHDWQAGEGGNRGHLTTDLGHCSYGAPKLWEDTPENRLLGCSLDSGG SIVVITPRNMETMP >gi|227860871|gb|ACLH01000049.1| GENE 6 6826 - 8238 1441 470 aa, chain + ## HITS:1 COG:Cgl2629 KEGG:ns NR:ns ## COG: Cgl2629 COG0477 # Protein_GI_number: 19553879 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 6 469 13 476 481 410 57.0 1e-114 MAGRMSAEIPSKVVINLSILVLGAMVMILNETSLSVALPAIMADYGIPATSAQWLLTGFM LTMAVVIPTTGFLLERLTTRQIFIASAGLFLAGTVVAALAPSFIVLLLGRVLQAGGTALM IPTLMTVAMTLVPAQRRGTVMGIISVVISVAPALGPTVGGAILNHFTWHVIFWAMVPLIA LILVAGLWRLSDVGENRDTPLDGLSVILSACAFGGLIYGLSSIEKMLQGGAWVDIAVTVV GVIALVVFIRRQRRLALEDRALMDLRPFRVRNFTLAVIILVLSFGLMLGMVTVLPIYLQT TLGATAFATGLAVMPGGILQAFLSPIVGRLFDSYGPRPLMIPGSLFMVASLWLMATLGEN SAVWMVVGMHVVFSLGMCLMMTPLMTTALSSLPEKLYSHGSAIMNTFQQLAGAMGTAFLV VFLTRGTQAGVAAGMGPAAATAQGTHWAFLFAGVAGTAIAVIAPLLKRVN >gi|227860871|gb|ACLH01000049.1| GENE 7 8246 - 9502 1039 418 aa, chain - ## HITS:1 COG:no KEGG:cauri_2230 NR:ns ## KEGG: cauri_2230 # Name: not_defined # Def: putative serine/threonine protein kinase # Organism: C.aurimucosum # Pathway: not_defined # 1 418 1 418 418 736 100.0 0 MTMLPEFFTTQHQLRQKAVLDQGADSTLFLVEDPSHNELLVEIYNPENRGVLRQSGVVGQ LQHSAIAPIVGTGTMNNGQEFFVRRSLPGEQLANFTSSGIGAQHLSREEAVAVFAPLADA IDFLLQKGQNKFALRALNPRRIILTNNRSNAFFAAVGPATGSDSPKATAKEAIDRLAQLL AAAYPSFRAAGAYTSAAAVVDSLRNASAGTSNASAAGTGTSSPVAPQWQPEQHYAAAPQG EWGTQPQPPVPASAPAEDSAQRGSTSKSKVFAGLGVGLLLLALIGGLLWFFFGRPAWSEE EQALVDDHPGLISSRPGGEGFDGATCESREPEDGQDAKITCVRDGVGYSVARYGDVTKRD AAAPTQDAQELSNGQCTVHSYDVSDSEPVFYMSTEDSADAVLVWGEDAEKLRLNMPLC >gi|227860871|gb|ACLH01000049.1| GENE 8 9749 - 12529 2517 926 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 831 1 806 815 974 58 0.0 VMFERFTDRARRVIVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDV RREVEEIIGQGSQPHTGHIPFTPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGV AAQVLTKLGADLPRVRQQVIQLLSGYEGNEGEGNQSQGGAGPVGAGAGAGPGGRGGPGGS GERSNSLVLDQFGRNLTQAARDGKLDPVVGRDSEIERIMQVLSRRTKNNPVLIGEPGVGK TAVVEGLALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDI ILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATTLDEYRKHIEKDAALERRF QPVKVEEPSLDDTILILKGLRDKYEAHHRVSYTDEALKAAASLSDRYINDRFLPDKAVDL LDEAGARMRIKRMTAPEGLREVDDRIAEVRKEKEAAIDAQDFEKAAGLRDKERKLGEERA EKEKQWRSGDLEEIAEVGEEQIAEVLAHWTGIPVLKLTEKESNRLLNMEEELHKRIIGQD DAVKAVSRAIRRTRAGLKDPRRPSGSFIFAGPSGVGKTELSKSLANFLFGSDDDLIQIDM GEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHKEIYNTLLQVL EDGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGLGFTGSSENDAEAQYERMKNKVND ELKKHFRPEFLNRIDEIVVFHQLTQEQIVEMVELLIARVEKQLSERDMGIELTQKAKDLL AQRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIGAGEIITVDVEGWDGESKDNSSATF TFTPRPRPLPEDIFDKDLEETAVREADEELATEIDAETHGPDSDGSDTVTPDVLDESGSD SAEESHNDDGDDGNPPPAGAGAGQPL >gi|227860871|gb|ACLH01000049.1| GENE 9 12683 - 13573 882 296 aa, chain - ## HITS:1 COG:Cgl1251 KEGG:ns NR:ns ## COG: Cgl1251 COG1230 # Protein_GI_number: 19552501 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Corynebacterium glutamicum # 2 296 21 318 318 271 52.0 1e-72 MAHEHHDHDHSSTPLRALLAALSITGIVFFAELIGGWLAGSMALMADAMHMLSDAAGLII AVIAVLVGRRQASAQATYGYRRVEVLAALANAVMVLAISVWIVVEAVHRLQSPAEVQGKA MLIIAVIGLVANALSAWVLHRHRESSINVEGAFLHVLVDLLGSVAVIVAGIVVLTTGFVA ADVIASLVIAAMVLPRAWQLMRLSASVLLEQVPAGFDANVIEPVLRRVEGVADIHDLHLW SLDGVNVLTTVHIVRDGTVDTGPLLDAAQHVLREHGIEHSTIQIEPPEHESHETVC >gi|227860871|gb|ACLH01000049.1| GENE 10 13650 - 14510 799 286 aa, chain - ## HITS:1 COG:no KEGG:cauri_2227 NR:ns ## KEGG: cauri_2227 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 286 1 286 286 441 100.0 1e-122 MSRLAYPGSPDHLNGAEDTSHIKEGQTVADNGYRHFIKHGSLLDPGAASKSASGTASTSN PTAGKTGTHTDGPKQGLSVKKQLLLLPLVIAVIVVVAIGYVAAKDALFGDKSEDSAAPAQ PAAEAPADSGASDGDTAGETGGDTAGDAQSGLTSADQAPEPIADFVEVCTDYEVMFSYYG ADNSPAPEAKGINCSVDTTKAPEVGYVVFTDDPAATAAVRDGKPVLKAAEISAESTRGST FKAQRLEAMFTVQEILPDDKGIVEYMIKSDDPEVAKKALVDLGVAK >gi|227860871|gb|ACLH01000049.1| GENE 11 14510 - 15070 333 186 aa, chain - ## HITS:1 COG:no KEGG:cauri_2226 NR:ns ## KEGG: cauri_2226 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 186 1 186 186 339 100.0 4e-92 MTGPQIALTDRPDLGAALKRAGDSEIVHAAATAVVEGLGVDEIVLEAAATKASGVDGAAF ATNRRILVTADKKDPSHFEFLELDNLGNVTVLPYQDGWAVVAQLYNTYKVWSGFTEKAAR RVQFAAQWALTAGREARTEASRAVSSEELFKRWKENKHRLDRSSFEEHVESMRSLYTDID SRWWTK >gi|227860871|gb|ACLH01000049.1| GENE 12 15203 - 16036 371 277 aa, chain + ## HITS:1 COG:no KEGG:cauri_2225 NR:ns ## KEGG: cauri_2225 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 277 17 293 293 538 100.0 1e-151 MSSTFTPAKFDDTWIYRLTKFPWPEPAPSKDEVRRHSWGMVYKSNKAFATPLGVEAINAR AAKYYKTSLEQNWGVTGAQEAYQVIDALLEGGQHVEDDLVLPLAYAVKDVPERELDAEVE EKVEFIKDFFVAQGADPRRGEHKFRYLVRMLRSEGFAKAAAPALPTTTRAWDIIRIHNVG GPATELGWISPEEFLQISDKAVAALQRYFVSWADVAASFWWGRMIWASDGEPDVAAAMKD QSQRLTELLAHSDSPWVRVPLHDIQAEEPFSSLGGLH >gi|227860871|gb|ACLH01000049.1| GENE 13 16040 - 17266 1265 408 aa, chain - ## HITS:1 COG:no KEGG:cauri_2224 NR:ns ## KEGG: cauri_2224 # Name: not_defined # Def: putative secretory lipase # Organism: C.aurimucosum # Pathway: not_defined # 1 408 1 408 408 683 100.0 0 MKLISPRALLAALALAATALAPAVASAAPGTPVSSHPIDHVAAISGVKAEKISYESTLMD GRPTTVTGVIYEPSAAWNGPGERPTIVFAPGTRGAGDQCAPSNAAQSVGNLALGPANQVT LNMNYEYALYQYAAQQGVRVVTTDLVGLGTPGHHTYVNHVEEAHAVLDAARATLRHVNAP VDAPVGFAGYSQGGGAAAAAAEFAATYAPELNVKGTYAGAPPADLFEVMNAVDGSSIVHV LGYAINGYAERSPEFYNEIVTEMNPRGMHFLASAAHACIGDSIATWGFTRTSQLTKTGES FGELVRRKPAAAQMLAEQRLGQRALNAPMLVMNSPTDDLIPYEQSRTMAGNYCSLGGTVQ FEAADPVDVLPHSGANHAVGIISSVPRGVDYLIDRFRDEPAPTNCQVS >gi|227860871|gb|ACLH01000049.1| GENE 14 17329 - 17499 258 56 aa, chain + ## HITS:1 COG:no KEGG:cauri_2223 NR:ns ## KEGG: cauri_2223 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 56 1 56 56 85 100.0 5e-16 MGIYFRKRKKTGKNSWINVSGSGASMSTKVGPVTFNSRGGMWVNLPGGLNFRGRWR >gi|227860871|gb|ACLH01000049.1| GENE 15 17499 - 18815 1213 438 aa, chain + ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 20 262 35 271 277 65 24.0 2e-10 MTSHPNSDYVRMGYEADVVLRLGMMLMGAGTSGYRVLRGMKRAARALGFDRLDANVGVTQ ITCTFHRGREFRTVVAQQHSPAVDASRIEALEDLTHHRLYAGITTEELTEMLDSIESTVV KRWNRWFLAVAAAIACASFAVLNFFTPLAILLVALAAFCGQLTRAVLHGKHVHQLGCIVA AGTVASLVYFFTTEAVAAAGVADPSEFSSGYVAAVLFLIPGFPLFSALIDLARFDFEAGL SRLTYALTVITAATFTVALVSWTTELTPEPGIPDYAPVWYLAAAAASFLGISGFAFLFNS SRRMVLVAAAVGTVANLVRLVLIGVGATAYVGAFAGGLIVGLLGAVASTRAHLPRITTTV PASVIMIPGTSMFRTVYHLNVGNMDQALSNFATASMAVAAIGCGLILARLLTDRDWTFGH LIDFSHVPSAEGGTNPRR >gi|227860871|gb|ACLH01000049.1| GENE 16 18781 - 19641 620 286 aa, chain - ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 5 285 9 292 293 363 65.0 1e-100 MDTQAVVEWFDAHERPLPWREPGTSAWGVLLSEVMSQQTPVARVAPQWEEWMRRWPTPQD LAAASKADVLRAWGKLGYPRRALRLWECAKEIGEGEVPGDVDKLLALPGIGEYTARAVAC FHFGHNVPVVDTNVRRVYARAEDGRFLAPSPAKRELAQVEALLPKENGPRFSAALMELGA LVCTAKTPDCAACPIKSTCAWQLAGCPEPSEEEAARAKKRVQKFTGTDRQVRGLLLDVLR GSPHPVTQADLDAVWPDAAQRSRAQASLLEDGLMDVNDEGLFHLPH >gi|227860871|gb|ACLH01000049.1| GENE 17 19683 - 20306 651 207 aa, chain + ## HITS:1 COG:Cgl2616 KEGG:ns NR:ns ## COG: Cgl2616 COG0288 # Protein_GI_number: 19553866 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Corynebacterium glutamicum # 1 206 1 206 207 182 46.0 4e-46 MPLVDVPQNPQKVWEALQEGNHRLVTGNLIDVNQDAKLRAGLTQGQDPRVIVLACSDSRA PIEHVFNIGFGDAFVIRTAGHILDSAVMASLDYALENLKANLLVVMGHQSCGAVGAASDF LAGGDLPTGLQRPIIERVAAASMVAKRDGREERADFERENTAQTVSQIISDVPAARRLLD AGTLGIVGLRYLLEDSSVETVVLHGVK >gi|227860871|gb|ACLH01000049.1| GENE 18 20414 - 21154 894 246 aa, chain + ## HITS:1 COG:no KEGG:cauri_2219 NR:ns ## KEGG: cauri_2219 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 246 1 246 246 416 100.0 1e-115 MTEPSRTPKQLPREIYVRRRVAALVAILVLVIVLIWAATALFSGSEEPGAESQQAAASDT LATSQEATSAVETTESTAAEGSTEAPESTEPKEGEQDKEAPSSEAKPEELTVDPTKTTCS LQDLKVLAKTNEDSVPADKMPTFYLEVFNPTTADCSIDLDEEQLRFEVYKMGSNERVWAD TDCYASVETGKQTFKSGETRYFQADWSRKRSEPGKCTDREDAEPGAYFLHSVIGENYSPA LPFNLL >gi|227860871|gb|ACLH01000049.1| GENE 19 21141 - 22523 1297 460 aa, chain - ## HITS:1 COG:Cgl2612 KEGG:ns NR:ns ## COG: Cgl2612 COG1066 # Protein_GI_number: 19553862 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Corynebacterium glutamicum # 34 457 1 429 431 571 79.0 1e-162 MAKKVRPVHTCSECGFVSPKWLGRCPECGSWGTLQETAAAESGTAAQAAVSGRRPTGLTP TSPAVPITKVGASATKAINTGIGELDRVLGRGIVPGSVVLMAGEPGVGKSTLLLEVASRW AQLGRTALYATAEESAGQVRARAERTGALHETLYLAAESNLDVVFGHVEQLKPSLLIVDS VQTMHAAGVEGVAGGVAQSRAVTAALTTLAKTTGIPILLVGHVTKDGNVAGPRVLEHLVD VVLNFEGDRQSSLRLLRGLKNRFGATDEMGCFEQTAAGIREVADPSGLFLSHRGSTPDGS AVTVAMDGVRPILAEVQALTVDPVAKNPRRVVTGLDANRVPMVLAVLQARAGERTNDKDA YVATVGGMKIQEPATDLAVALATWSSLHEQPLPPKTVVIGEVGLAGEVRRVPNLDRRLAE AARLGYRYAIVPPGKVEVSGGMQVRQAATLSEAIAALKAD >gi|227860871|gb|ACLH01000049.1| GENE 20 22640 - 23257 805 205 aa, chain - ## HITS:1 COG:no KEGG:cauri_2217 NR:ns ## KEGG: cauri_2217 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 15 205 1 191 191 340 99.0 3e-92 MISFVIAIQWRTLTVQSLKSAARCGAIMSVTALSALALASCSAGHVAQTAEKVIAVDGAS ASSEDGKVAVRDVTIQVEPDTGETSLKFVAVNQGYKVDDVTLESVNVDGQDVPLEGVEPL PRDHALYADSQANLDRLPKDGKDKNITYVTTSLENEDYGFGGSRPVTFTFNTGTIEVDAT VSASPLQSGNYDRDPQSTEGYAENK >gi|227860871|gb|ACLH01000049.1| GENE 21 23504 - 24088 799 194 aa, chain + ## HITS:1 COG:Cgl2608 KEGG:ns NR:ns ## COG: Cgl2608 COG1329 # Protein_GI_number: 19553858 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Corynebacterium glutamicum # 1 166 1 166 198 236 79.0 2e-62 MEFKVGEVVVYPHHGAAKITAIETREMGGEELEYLVLQINQSDLVVRVPSKNVEMVGVRD VVGKEGLEKVFSVLREVDVEEAGNWSRRYKANQERLASGDINKVAEVVRDLWRRDQDRGL SAGEKRMLAKARQILVGELSLAKPVDEKKADTMMEEINATIERHRAAGLVEDKSITTDID NDVDLDDLSFDDED >gi|227860871|gb|ACLH01000049.1| GENE 22 24060 - 24821 303 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 19 239 6 222 234 121 35 8e-27 MTSPSTTKTNTRSTARVIALVAAAGQGTRLGAEVPKAYVELRGRTLLERSVRAMITSEFV DEIIVLVSPSMEGYAASILNRIDSDVPVRIVHGGDERADSVWAGLQAIPDEDAVVLIHDA ARALTPPGMIARVAKRVLDGATAVIPVLPVADTIKEVEGQTVLSTPDRSRLRAVQTPQGF NLAALRRANLDYWAQDPDFVATDDASLMEWHGERVETVQGDTFAFKITTPIDLVLAKAVT DEAEPTIFEVPSD >gi|227860871|gb|ACLH01000049.1| GENE 23 24814 - 25296 361 160 aa, chain + ## HITS:1 COG:Cgl2606 KEGG:ns NR:ns ## COG: Cgl2606 COG0245 # Protein_GI_number: 19553856 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Corynebacterium glutamicum # 1 160 1 160 160 261 82.0 3e-70 MTNPIIPRVGIATDAHQIEPGKPCWIAGLLFEDVDGCEGHSDGDVVSHALVDALLSASNL GDLGSFVGVGRPEYDGVSGAQLLRECRELLEKEGFIIGNAAAQLVGQSPKMGPRRKEAEA VLSEILGAPVSVSATTTDHLGFTGRKEGRAAVATAVVWRA >gi|227860871|gb|ACLH01000049.1| GENE 24 25344 - 26765 1656 473 aa, chain + ## HITS:1 COG:Cgl2589 KEGG:ns NR:ns ## COG: Cgl2589 COG0215 # Protein_GI_number: 19553839 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 3 471 2 459 460 725 77.0 0 MSTLRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQG YDVALVRNVTDIDDKILTKAAENNRPWWEWVSTYEREFTKAYNTLGVLPPSVEPRATGFV TQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSGNRVEEME QGETDNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGGEFDIHCG GLDLQFPHHENEIAQSHAAGDKFANYWMHNHWVTMAGEKMSKSLGNVLSIANMLEIVRPV ELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKFENVEKGEWTPAFEEAMNDDIA VPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVLGFDPLDEQWKDSGEESGAE AALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITITDTADGPTWSLAD >gi|227860871|gb|ACLH01000049.1| GENE 25 26807 - 27757 1250 316 aa, chain + ## HITS:1 COG:Cgl2588 KEGG:ns NR:ns ## COG: Cgl2588 COG0566 # Protein_GI_number: 19553838 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 1 312 1 310 313 445 76.0 1e-125 MARTHGRGGAGIRKTNKKGATKGSGGQRRKGLAGKGPTPKAEDRVYHAKHKAKLERERRN SGRHDKETAEMVVGRNPVIECLHAKVPATSLYIVQGTRNDARLSEAVAMCNTRNIPILEV QRHEMDRMTGNGMHQGIGLQIPPYKYADVHDLMDRARDAQEPGMFVILDNITDPRNLGAV IRSVAAFGGHGVIIPERRSASVTAVAWRTSAGTAARLPVARVTNVTRTVQDFQKAGYQVV GLDAGGEHTLDTYNGGTDPVVIVIGSEGKGISRLVRENCDAIMSIPMTDWVESLNASVAA GAVLSEFARQRRAAQK >gi|227860871|gb|ACLH01000049.1| GENE 26 27776 - 28510 632 244 aa, chain + ## HITS:1 COG:Cgl2766 KEGG:ns NR:ns ## COG: Cgl2766 COG3910 # Protein_GI_number: 19554016 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Corynebacterium glutamicum # 1 242 1 236 240 187 44.0 1e-47 MFLTSVRPAPELIGEGLPGVPEHMRRLGVLIAALPGGALRLPTPVTVVVGDNGAGKSTLL EAIAVGLGVNPEGGSRHARFATGDEDYPEWLICSRAHNPRDVYFLRGETFLNLSEYHHQI HSPENPDPLSDLPFLSHGQGLLALVERRFHSDGMIILDEPEDGLSYPRQVEVVTQLERLA AQGAQVILATHSPVFLSMQGATVYAFGDKGIAPVAPEATEAVHAAREFLADPLGTAAFLI GEGE >gi|227860871|gb|ACLH01000049.1| GENE 27 28507 - 29157 447 216 aa, chain + ## HITS:1 COG:Cgl2765 KEGG:ns NR:ns ## COG: Cgl2765 COG3910 # Protein_GI_number: 19554015 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Corynebacterium glutamicum # 5 211 4 223 244 182 47.0 5e-46 MRDFYVDAYAALDGGHGPEWVSSVPGFVALRRQGLDLRAPVTVLTGDNGVGKSTLAEGIA FEYGFPERGGIWGVQRSAGPINPLRRWASLRLGTAPKDGYFLRAEAHYNVGSTAMSHGES VMDVVQRSFDGRGLYILDEPESGLSLVRQMTLMAEIHRAAEAGAQFIVVTHSPIVAAIPG ARIVEITEDGFFLELRDVTQTLAFQSLREFLYASGC >gi|227860871|gb|ACLH01000049.1| GENE 28 29500 - 29562 78 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERDLYAIVNDIADHYNKVH >gi|227860871|gb|ACLH01000049.1| GENE 29 29778 - 30617 876 279 aa, chain - ## HITS:1 COG:Cgl2567 KEGG:ns NR:ns ## COG: Cgl2567 COG3509 # Protein_GI_number: 19553817 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Poly(3-hydroxybutyrate) depolymerase # Organism: Corynebacterium glutamicum # 11 277 10 265 271 171 39.0 1e-42 MTLERRSLELQDRTRTYLVYRPNDDVERQRDLLLFFHGSLQSANVIRRFTNGTFDDLATR HGMLAVYPTGVEQHFNDARATLPVAARELGIDDVAFTRAILDELRAEQEVGRVFLCGFSN GGQMVIRLLFDAPGLADAACVFASTLGAGANHAPTNPDSAYQPTPVMFVHGTGDRLAPYT GGTAGIDPKRTRGAVTGAQENAARFAELNHAAGPERTHLFPDTVVDRWEPADATGAPVEL VSVEGMGHVIPSGNELDPRLGKNTDSFIAAELVEEFFGL >gi|227860871|gb|ACLH01000049.1| GENE 30 30627 - 31589 1021 320 aa, chain - ## HITS:1 COG:Cgl2579 KEGG:ns NR:ns ## COG: Cgl2579 COG1108 # Protein_GI_number: 19553829 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Corynebacterium glutamicum # 6 294 3 290 293 311 71.0 1e-84 MGGSSLSKFIEDTHYLLGVDFVQSSLIACALLGILSGVMTSLIVLRQMSFSVHATSELAL MGAAAALLFGLNIGFGAIAGAIVAAIILAVLGLKGQQDSAIGVVMSFGLGLSVLFLHLYP GNAKTAMTLLTGQIVGVSSASVWLLAATTAIIVAVVALFWRPLLFASADPVMAQAAGVPV KSLAVCFAILVGLTAAQSVQIVGSLLVMALLITPGAAAVQITSSPLRAVVWSTIFAEVSA VGGLVLSLAPGLPVSVFVTSISFVIYLVCRGIGWARSRKAVRDDVAARRASQEHFRAATD RADAETHHTSTHDEHCAHQD >gi|227860871|gb|ACLH01000049.1| GENE 31 31567 - 32268 742 233 aa, chain - ## HITS:1 COG:Cgl2578 KEGG:ns NR:ns ## COG: Cgl2578 COG1121 # Protein_GI_number: 19553828 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Corynebacterium glutamicum # 1 233 1 230 230 276 63.0 3e-74 MLISFKNAAVEPLWSDMNLAVDRGEFIAVLGPNGVGKSTLLGTILGTRQLTAGSVGVTCR VGFIPQQRMFPQDLPLRARDLVSLSLAHGTLRNRRPARGRVDEVLAEVGATGIADRRVGQ LSGGQQQLIRQAQALANDPELILADEPLLSLDPARQQATVAKLDAWRHERGTSVLFVTHG INPVLGVVDKVLYLAPNGHTFGTVDEVMRSEVLSELYGSSVTVLNVDGRLIVV >gi|227860871|gb|ACLH01000049.1| GENE 32 32269 - 33336 1222 355 aa, chain - ## HITS:1 COG:Cgl2577 KEGG:ns NR:ns ## COG: Cgl2577 COG0803 # Protein_GI_number: 19553827 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Corynebacterium glutamicum # 16 354 7 312 317 213 43.0 4e-55 MTTSLSRRAFRRPTALLFAATLGAATLSACSSSGDNADGGSDAGSDKETIQVVASTSIWA DVAQAVVNTAQTDVNIDVHAIVSGNSVDPHHFEPTAADIARANEADVIIAGGGGYDAWLY QAVKNQDQIIHALPLTAHDHGDHDHGEHEHGEEHDHAHDHDEHAHDHDHAHEGETVTMDE AKKIAAEHPEQITNIDGNEHVWYDAAAIEKVATEVAELVNETNPEAKATADPLVERVEGL KARIEKLPQRNYAQTEPIADYIFKYTDATPEGYRKATVAESEPTAADLARFLEDIKQDKI DLLIFNPQTETDMTKRIRAAAEDKNIPVVEIGETPPEETNFLDYYEEVVNALEAV >gi|227860871|gb|ACLH01000049.1| GENE 33 33367 - 34494 1143 375 aa, chain + ## HITS:1 COG:Cgl2576 KEGG:ns NR:ns ## COG: Cgl2576 COG1609 # Protein_GI_number: 19553826 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 21 372 11 359 360 359 57.0 4e-99 MSNDNELKTGNLTVMSKRSTTLASLAAELGVSPTTVSNAYNRPDQLAPATRERILAAAAE HGYTGPDPTARSLRTRRQGSLGVLLTEHLSYAFEDMASVDFLAGMAEASAGASTTLTLIP AGPDTVGAPNDAHAAQLVGSAAVDGFVVYSVAAGDAYLDAVRRRGLPVVVCDQPTDSGLP FVGIDDRAAIAPAAQALVDASHTRIGILTIRLHRERLDGEVTAAQLAAADMHVQRSRVLG ALDVFAQAGLDPARIPVVTRHINDPRTAYAAAEELLTKYPDLTAVLCTTDSMALGVMAYA RDHGIAVPEQLSVTGFDGIAPALALGLSTVVQPNKEKGAAAGRMLAGLIEGRGEVPRVLL ETTFHPGRTVAPAGA >gi|227860871|gb|ACLH01000049.1| GENE 34 34491 - 35234 782 247 aa, chain - ## HITS:1 COG:Cgl2575 KEGG:ns NR:ns ## COG: Cgl2575 COG1877 # Protein_GI_number: 19553825 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Corynebacterium glutamicum # 2 246 5 249 256 201 47.0 1e-51 MIDALASAEHLAVVSDFDGTLAGFARNAYEVSPEQRSLDALAALAQLPNTTAAVLSGRHL EGLKQVCPLREPVLFGGSHGAESSWEDSVLTPEMEAHLAKKEAELKEIIARHPGAELEIK PFQRVLHLRALELQDPDAAAAAYAEGAALSADGFPKTEGKCVVEFSATQATKGTWIEALR QRVGATAVVFLGDDTTDEDGFAVLNQPPDLGVKVGEGDTQAALRVPDIWAVSDFLEELAA ARAQHSA >gi|227860871|gb|ACLH01000049.1| GENE 35 35266 - 35790 350 174 aa, chain - ## HITS:1 COG:no KEGG:cauri_2203 NR:ns ## KEGG: cauri_2203 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 174 1 174 174 333 100.0 1e-90 MTRRRTTAALTSVLSTALLALGVAGCASTEEEPTPRGDDRIVGKDWQVINLYTSPDAPSS LPADTAQVPHMSFGEHTAVGSTGCVSFTAEVSFHKDDKASTIWEGDVMRVEKATYESPPR SADCEGSVQWADSLMRNLIAEGHEFDFALNPNNQLVLTLRTDKVDSPIIRMASL >gi|227860871|gb|ACLH01000049.1| GENE 36 35787 - 37208 1719 473 aa, chain - ## HITS:1 COG:Cgl2573 KEGG:ns NR:ns ## COG: Cgl2573 COG0380 # Protein_GI_number: 19553823 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Corynebacterium glutamicum # 5 470 4 480 485 639 66.0 0 MSGRSNSFVVVANRLPVDLETAADGTREWKASPGGLVTALSPVLEEHQGCWVGWPGVADE APEPFTTDNGVLLHPVRLTNEDFEAFYEGFSNATLWPLYHDLIVTPIYNRDWWDTYREVN LRFANEVAAVAAENATVWVQDYQLQLVPGILRQLRPDLTIGFFLHIPFPSPDLFRQLPWR EELVRGLLDANLIGFHLESNARNFLELARTQGLTVEGEVSTREVTAHIVTNSGHSVGVGA FPISIAASEFAEGGDTGDVAQLRAELGNPAHVILGVDRLDYTKGILQRLTAFEELLETGA LNPEKVTFVQLATPSRERIDHYRATRSKVEEAVGRINGRFGRLGAPVVHYQHSSVPKDVL RRYYRLADIMLVTPFKDGMNLVAKEYVASHSDGSGALVLSEFAGAAAELTQANLCNPFDI ESIKRALLSAVKALEESPETMRERMTAMNQQVRQHDIALWSQSFLGALDQEQA >gi|227860871|gb|ACLH01000049.1| GENE 37 37211 - 37570 348 119 aa, chain - ## HITS:1 COG:no KEGG:cauri_2201 NR:ns ## KEGG: cauri_2201 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 65 1 65 119 101 100.0 1e-20 MPPKVTDTQPAADQTHAVEEETARAARRVVATYAEDFLDGVTLMSMLGVEPEGLVHRKVL AEQADAASKKSSKKATKKASKKSTKKTTKKATKKATKKATKKSTKKATKKATKKAAKKA >gi|227860871|gb|ACLH01000049.1| GENE 38 37621 - 39297 1651 558 aa, chain - ## HITS:1 COG:Cgl2571_1 KEGG:ns NR:ns ## COG: Cgl2571_1 COG2966 # Protein_GI_number: 19553821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 294 11 286 286 251 54.0 4e-66 MSVLSSLRQRLLYRSAPVATIDAAKAAPPPSPLAPVDLTDPAQVTGVMEIAARVGEILIA AGSANTDVQAQIHLVASSYGLHYCHVSILMNTITIHTSIGTGPDRHNLHVFRVAPSIAVD FTKLSAVDRLIRSIHSGATPPAMAEKILDDIDAMKNPYSKTTIVSAWGAMGGFIAVMLGG DLLVGVVTFLISALIMGTNMFLADYRLPPFYQNLVGGLLAVVPAAILYNIFAGFGIQILP SQIIGSDIIVLVAGLTLVQCLVDGITRAPVTSSAKFFEALMSTGAIIAGVGLGIQVASWL GFSLPPLATLAPPVYHQIPLLVLCGGIGSAAFALALGASWSEVTISGLTAAAGMVFYYFL VALLGVGAVVASGISAVAVGLAGGLLSRRYMMPPLITMIVGYTPMLPGLTLYRGMYAMLN EQLITGLTNLASALAIAGALAAGVVFGERVARRLRRPQYFRPYNSIKRLGTFSFSRATRL AQRALIPRVPLSPFAPRHNLPAPPPQYGPKPPTPAQQARFQQGDAVTDMWPVTTQFPAQR PTYTVPGKDDPSAPTNSQ >gi|227860871|gb|ACLH01000049.1| GENE 39 39598 - 39702 75 34 aa, chain - ## HITS:1 COG:no KEGG:cauri_2199 NR:ns ## KEGG: cauri_2199 # Name: not_defined # Def: transcriptional regulator protein, TetR family # Organism: C.aurimucosum # Pathway: not_defined # 1 34 106 139 139 70 100.0 3e-11 IANGLWVHDHLTGRPLPPQRRRALIDVALGHLAE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:31:58 2011 Seq name: gi|227860870|gb|ACLH01000050.1| Corynebacterium aurimucosum ATCC 700975 contig00112, whole genome shotgun sequence Length of sequence - 16265 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 10, operones - 4 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 63 - 1562 1677 ## COG0477 Permeases of the major facilitator superfamily - Prom 1707 - 1766 1.7 + Prom 1576 - 1635 2.2 2 2 Tu 1 . + CDS 1732 - 3477 2582 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 3 3 Op 1 . - CDS 3549 - 4658 842 ## COG2270 Permeases of the major facilitator superfamily 4 3 Op 2 . - CDS 4674 - 4838 237 ## COG2270 Permeases of the major facilitator superfamily 5 4 Tu 1 1/0.600 + CDS 4920 - 5693 677 ## COG0789 Predicted transcriptional regulators 6 5 Op 1 40/0.000 + CDS 5826 - 6530 863 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 7 5 Op 2 . + CDS 6542 - 7993 1109 ## COG0642 Signal transduction histidine kinase 8 6 Tu 1 . - CDS 8017 - 8445 511 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 9 7 Op 1 1/0.600 + CDS 8480 - 9754 1603 ## COG0151 Phosphoribosylamine-glycine ligase 10 7 Op 2 . + CDS 9794 - 11233 1919 ## COG0015 Adenylosuccinate lyase 11 8 Tu 1 . - CDS 11429 - 12235 908 ## cauri_2186 serine/threonine-protein kinase (EC:2.7.11.1) - Prom 12266 - 12325 3.0 12 9 Op 1 3/0.000 + CDS 12291 - 13157 1124 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 13 9 Op 2 . + CDS 13167 - 15275 2568 ## COG1770 Protease II 14 10 Tu 1 . + CDS 15394 - 16077 611 ## COG3233 Predicted deacetylase Predicted protein(s) >gi|227860870|gb|ACLH01000050.1| GENE 1 63 - 1562 1677 499 aa, chain - ## HITS:1 COG:Cgl2560 KEGG:ns NR:ns ## COG: Cgl2560 COG0477 # Protein_GI_number: 19553810 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 6 499 2 494 494 471 57.0 1e-132 MTDVHTKASAEALSTSAARRWTFFGVVSLGLLMIGLDNSILYTALPELSEQLHASSLQQL WIINAYALMLAGLLLGTGTLGDKIGHRRMFVIGLWVFGIASLAAALAPGAWELVAARAFL GLGASIMMPATLALIRLTFEDEIERNTAIGIWGSIAVVGAAAGPTVGGFLLEHFWWGSVF LVNVPIVIIALILTAFLAPPNVANPAKHWDFLSSLYALITLASLVLVIKSVASSHLNAML IGGALAACLIGAVLFTRRQHKLEEPLLTFDIFRSPIFSGGVLAAAGAMFGMAGLEMTTTQ KLQLVDLYSPLHAGLIISLIAIAALPMSALGGANLHRWGFLPIIAGGFLAMAAGIGCVVW GGTHEVFPAYLAGLFITGLGAGFVMSVSSTAIIGAAPASRSGMAAGVEEVSYEFGTLLSI AVTGSVLPMLYKAGLPEDIRDLGMDALHDPALAEAAGPAYADAYLATAAGLGVVMLIFAA VTGWCFRSNPTSGGADATH >gi|227860870|gb|ACLH01000050.1| GENE 2 1732 - 3477 2582 581 aa, chain + ## HITS:1 COG:Cgl2559 KEGG:ns NR:ns ## COG: Cgl2559 COG0028 # Protein_GI_number: 19553809 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Corynebacterium glutamicum # 1 578 1 579 579 846 75.0 0 MARNYATQLVETLEAQGVKRIYGLVGDSLNPIVDAVRQSSIEWVHVRNEEAAAFAAEADS LTTGNLAVCAASCGPGNTHLIQGLYDAHRNGAKVLALASHIPSRQIGSKFFQETHPEAIF QECSGYCEMVNSAEQGGVVLHHAIQSTMAGKGVSVLVIPGDVSTQEAEEDTFTSSVISSG RPVVYPDPAEAAALTQAINEAKTVALFVGAGVKNAREQVLALAEKIKAPIGHALGGKMYI QYDNPFDVGMSGLLGYGAAHEATHEADLLILLGTDFPYNDFLPDANVAQVDIDGSHIGRR TRIKYPVTGDVAATIENILPHVDEKKDRSFLDKMLKKHYDKLHHVVEAYTSGVEKHTPIH PEYIADLIDQQADEDAIFTVDTGMCNVWGARYITANGKREQIGSFRHGTMANALPMAIGA QAAHPGRQVITFSGDGGLSMLMGELLTVKLHNLPVKMFVFNNSSLGMVKLEMLVQGLPEH ETDHEHVNYAKIAEGAGIKHFRIEDPKDAPRLIKEALAYDGPALIDVVTDPNALSLPPTL TFEQLLGFSKAATRTVFGGGVGQMLSMAKSNLRNIPRPQDF >gi|227860870|gb|ACLH01000050.1| GENE 3 3549 - 4658 842 369 aa, chain - ## HITS:1 COG:Cgl2562 KEGG:ns NR:ns ## COG: Cgl2562 COG2270 # Protein_GI_number: 19553812 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 1 369 66 439 440 393 57.0 1e-109 MTVAGLVIFAVTPVMGQRSDRLGTRRRALGFWSLLTFLVMASLFFIRNDAPVYFWLGLIG LAVGSVTIQFAEVNYFAQLNQVATEDKVGRVSGLGWSAGYFGGIVLLLVCYFGFVSGEGG GLGLNTEGGWNIRLVALLSAAWFGLSAIPVLLRVPEIAPSGERTGGVAASYRELWRTVHT LWREDRNAFAFLFASAIFRDGLSAVFSFGAVLGVSVYGLSPGDVLIFGVAANVAAALGAV AGGLIDDHVGPKAIILTCLSILTLMAVIMFFAQGPTAFWICGLILCLCVGPAQASARGFL ARVAPPGREGEMFGLYATTGRAVAWLTPFLFGVFVSLIGQGDRGGVLAIGLVLLVGALVL IPVKDPANV >gi|227860870|gb|ACLH01000050.1| GENE 4 4674 - 4838 237 54 aa, chain - ## HITS:1 COG:Cgl2562 KEGG:ns NR:ns ## COG: Cgl2562 COG2270 # Protein_GI_number: 19553812 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 3 47 8 52 440 63 66.0 7e-11 MTQASKRTDRLTVAAWALWDWGSAAFNAVLVTFIFSVYLTDSVGQQIDSQFTPA >gi|227860870|gb|ACLH01000050.1| GENE 5 4920 - 5693 677 257 aa, chain + ## HITS:1 COG:Cgl2557 KEGG:ns NR:ns ## COG: Cgl2557 COG0789 # Protein_GI_number: 19553807 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 4 257 3 251 251 216 48.0 2e-56 MRNDYSIGDVAGILKVTTRTLRYWDDIGLLSPEWRTGGDHRLYTEDDVQRGMDILIYRSV GIELRDIAVLLDAPSSATLARLRTQHEALQKRRADVDAMLYAVERLIEETEMDKNLSPSQ KMRNLGDAWPQLQEEAHEKWGNSKEWAASAAAAESMGKKGWEEFSVDHENFAAELAEAAN AGVEAGSEEAKEIVDKHRALIAQWYPVSRSKQVILARMYCEDPRFDETYRGNAHYLRQLI EAQAQAEGLDLGNLVWD >gi|227860870|gb|ACLH01000050.1| GENE 6 5826 - 6530 863 234 aa, chain + ## HITS:1 COG:Cgl2556 KEGG:ns NR:ns ## COG: Cgl2556 COG0745 # Protein_GI_number: 19553806 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 234 1 235 235 371 82.0 1e-103 MDDSKDVKVLVVDDEPNIVELLTVSLKFQGFDVYSANSGNEALRIAREINPDAYIMDVMM PGMDGFELLGKLRAEGLDGPVLYLTAKDSVDQRIHGLTIGADDYVTKPFSLEEVITRLRV ILRRGNAVDDQDGSATMTYADLTLNDDTHEVTKAGEIVELSPTEFNLLRYLMQNREVVLS KSKILDNVWHYDFGGDGNVVESYISYLRRKIDTGDTPLIHTVRGVGYVLRTPRS >gi|227860870|gb|ACLH01000050.1| GENE 7 6542 - 7993 1109 483 aa, chain + ## HITS:1 COG:Cgl2555 KEGG:ns NR:ns ## COG: Cgl2555 COG0642 # Protein_GI_number: 19553805 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 31 480 36 485 485 435 53.0 1e-121 MSESTANTQDLESGSAPVRNSALRRRMQRPKALPLRTWLLVLMVLVSGLGLAMSSLAVSS IMRNVLYTRVDTELNDALSSWASNLDAAFYTPQDGSRRPPTDYVALAYYPDGSVVTTRPT AALPDARSVVVGGEPSTVRSIQGETEWRAVAKLKTDGSVVVVAKDMTTENSILKGLAMVQ VIIAALVMLIIALVGMWLIHRALRPLRVVEKTASQIAAGNLDKRVPEWPPHTEVGQLAAA LNVMLGRLQNSVVHAQEKEQQMRRFVGDASHELRTPLTSLRGYTELYRSGATKDPEFVFS KIDAESQRMSLMVEDLLALTRAEGSRLDMREVDMLELVLSVGSSARAAFAGRTINVNNEA SGIPMVNGDADRLHQVLLNLVSNGIRHGGEEASVTLTLRDDEEHVLIDVADDGKGISPED AAHIFERFYRADTSRTRDTGGSGLGLAIVKSLVEQHGGSISVDSELGSGSVFTVRLPKAA ASA >gi|227860870|gb|ACLH01000050.1| GENE 8 8017 - 8445 511 142 aa, chain - ## HITS:1 COG:Cgl2549 KEGG:ns NR:ns ## COG: Cgl2549 COG0537 # Protein_GI_number: 19553799 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Corynebacterium glutamicum # 1 132 1 132 136 197 73.0 4e-51 MSSVFTKIIEGELPARFVYRDEKCVAFLSIEPLRYGHTLVVPVEEVDKWTDLDPETWAHL NAIALEIGGAIKTAFDTPRTGYIIAGFDVPHTHIHLFPTEKMEDYDFAKAFAADATDPAA MDEAAARIRQHLGTDEDGRRDS >gi|227860870|gb|ACLH01000050.1| GENE 9 8480 - 9754 1603 424 aa, chain + ## HITS:1 COG:Cgl2548 KEGG:ns NR:ns ## COG: Cgl2548 COG0151 # Protein_GI_number: 19553798 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Corynebacterium glutamicum # 1 424 1 421 421 533 71.0 1e-151 MRILVIGSGGREHALLTGLKADPTVTDLHIAPGSPAHAKQATVHPEYSQVDDPARMVELA VDIAADLVVIGPEVPLVKGVADALRERGIAVFGPSASAAQIEGSKAFAKDVMAAAGVRTA RAEQLAPGTNDADIEAALDRFGPHFVVKDDGLAGGKGVVVTESRDAARAHVDAVHAAGNP VLLESFLDGPEVSLFCLVDGETVVPLLPAQDHKRAYDNDEGPNTGGMGAYTPLPWLPADG TQRIVDEVCVPVAKEMVKRGTPYTGLLYAGLAWGKEGPAVVEFNCRFGDPETQAVLALLK SPLGEVLNATATGRLASLAPLEWEEGYAVTVVLAAEGYPASPRKGDPITSPDLDDPTRVL HAGTTTGEGGYVSNGGRVLNVLGRGATLADARAAAYEVLDGIKLEGSFFRKDIALPAEKG QISI >gi|227860870|gb|ACLH01000050.1| GENE 10 9794 - 11233 1919 479 aa, chain + ## HITS:1 COG:Cgl2546 KEGG:ns NR:ns ## COG: Cgl2546 COG0015 # Protein_GI_number: 19553796 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Corynebacterium glutamicum # 4 479 1 476 476 757 83.0 0 MSDVAEKKNISNVLSARYASPEMAEIWSPEHKIILERQLWIAVMKAQKDLGVDIPAQAIA AYEAQVENVDLASIAQRERVTRHDVKARIEEFNALAGCEHIHKGMTSRDLTENVEQLQIL RSLELVRNKAIAVVSRIGEHAAQYQTLVMAGRSHNVAAQATTLGKRFASAADELLLGIER VESLLSRYPLRGIKGPMGTSQDMLDLMGGSEDKLAALETRIADHLGFSRVFNSVGQVYPR SLDFDAVSALVELGAAPSSLATTIRLMAGNETVTEGFKEGQVGSSAMPHKMNARSCERVC GFQVILRGYLTMVADLSGQQWNEGDVFCSVVRRVALPDAFFAIDGMFETFLTVLAEFGAF PAMIDRELERYLPFLATTRILMAAVRAGVGRETAHEVIKENAVAVALNMRENGGEQDLIE RLAADERLPLDAAALEAALSDKHAFIGAAESQVSQILGRIKAIVDQHPKAAAYTPGEIL >gi|227860870|gb|ACLH01000050.1| GENE 11 11429 - 12235 908 268 aa, chain - ## HITS:1 COG:no KEGG:cauri_2186 NR:ns ## KEGG: cauri_2186 # Name: not_defined # Def: serine/threonine-protein kinase (EC:2.7.11.1) # Organism: C.aurimucosum # Pathway: not_defined # 1 268 1 268 268 464 100.0 1e-129 MHSRMISLLTSAALVGGALSVPAAQAADISVRESDHGQWLCTMSASATDRELARDVREGY INTIRETSKQIQAQFPKLDFSAYTSRDISKAPGYAATVAALGKAGYTGADMVIIMVGASA PEDLVEDESVLLPKDAEYSINAAKSQAEKERAPLLSTGSDFSPKLRAALAENQAQEKEAV DAFNAAQMQSFAECVEELRSRGAQEGIQPVPELPISGKTTQQQTSSTGAAVLGIMAVLTA LMLGGYFTANGKSLGGFELPVLRIPGMV >gi|227860870|gb|ACLH01000050.1| GENE 12 12291 - 13157 1124 288 aa, chain + ## HITS:1 COG:Cgl2543 KEGG:ns NR:ns ## COG: Cgl2543 COG0152 # Protein_GI_number: 19553793 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Corynebacterium glutamicum # 4 288 1 289 297 415 70.0 1e-116 MYVMRPELSSYAHIASGKVRDIYEIDDSTLLMVVSDRISAYDHALEPAIPDKGRVLTATS KFFFDVIVFPNHLAGPLDDERIPEEVLGRAMVVQKLDMLPFECVARGYLTGSGLKEYQAS GSVCGVELPEGLTEASRLPEPIFTPATKAEQGDHDENVSFDVVVDKLGRERAEELREATL RIYAEAAALAEEKGIILADTKFEFGVDKHGTLVLADEVLTPDSSRYWPADTYEEGKVQPS FDKQYVRDWLTNSGWDKESTPPRLPDDVVQATRARYVEAFERLSGTTF >gi|227860870|gb|ACLH01000050.1| GENE 13 13167 - 15275 2568 702 aa, chain + ## HITS:1 COG:Cgl2542 KEGG:ns NR:ns ## COG: Cgl2542 COG1770 # Protein_GI_number: 19553792 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Corynebacterium glutamicum # 1 699 5 703 706 950 67.0 0 MNAPIAAKRPVTREFHGRSFVDNYEWLRAKEAPETREYLEAENAYTKERTAHLDTLTENI FTEVKSRIKQTDMSVPQRRGKYWYYGRTEEGKEYGYSCRIPVSEGSDPWTPPTIPEEGAP DGEQVLLDVNALAEGHDFFALGASSVSDSGDLLAYSVDVAGDERFELFIKDLRTGELLED RLEGIFYGATWVGEEFIFYTTVDDAWRPDTVWRHRVGTPQSEDVVVMREEDSRFGIGVGT TRSEKYIMIVSGSKTTNEAWVLEQDNPEGEFRCLWERETGVDYDVDHAVVAGTDYWVVTH NATGPNFALGYCPVADELPSLRDLTVLMPHDDSVRIEGVDCYRDQIVVGYRRGGIGRAAV MDVREGWTSLSELHFNEELYTVGVAGNPEWDAPVLRVSYTSFIQPAQLFDYRVATGEYTL LKEQEVPGGYDKDEYVAYRVWSKAPDGTEVPVSIVHRADLDRTQPNPTLLYGYGSYEANM DPYFSVFRLSLMDRGMIFAMAHVRGGGEMGRKWYDDGKMLAKKNTFTDFIAVADDLIARR ATTPSQLVAEGGSAGGLLMGAVANMAPDRFKAIEANVPFVDPLTSILMPELPLTVVEWEE WGDPYHDPEVYDYMASYSPYENIAPQKYPNILALTSLNDTRVLYVEPAKWVAKLRDVATG GEFLLKTEMAAGHGGVSGRYAKWRQAAFEYAWLINQATGAES >gi|227860870|gb|ACLH01000050.1| GENE 14 15394 - 16077 611 227 aa, chain + ## HITS:1 COG:Cgl2540 KEGG:ns NR:ns ## COG: Cgl2540 COG3233 # Protein_GI_number: 19553790 # Func_class: R General function prediction only # Function: Predicted deacetylase # Organism: Corynebacterium glutamicum # 1 204 1 204 229 267 67.0 1e-71 MHGHLLVSISSIFDDTRSQASDLLKQFDKAGVPVSLLVAPHIDGNWHLAKDAATQSWLRE QAESGRVLILNGFDQAVQGRRAEFANLDAHEARLRLKGATRQMARIGFEPTIFAPPRWRM SEGTLEVLPEFDFDFAASTRGIHDLRTGELHQARNLSFGEGFGSAKWWRRNIIRAAERSA QRGNTVRLSISGRNLDDRKVVADFLKAAERAIEAGASPADYSVFAPR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:05 2011 Seq name: gi|227860869|gb|ACLH01000051.1| Corynebacterium aurimucosum ATCC 700975 contig00113, whole genome shotgun sequence Length of sequence - 6164 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 103 - 131 1.0 1 1 Tu 1 . - CDS 133 - 2961 3446 ## COG2374 Predicted extracellular nuclease - Prom 3178 - 3237 1.9 + Prom 3097 - 3156 2.7 2 2 Op 1 23/0.000 + CDS 3191 - 3421 364 ## COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 3 2 Op 2 9/0.000 + CDS 3421 - 4083 713 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 4 2 Op 3 . + CDS 4112 - 6164 2626 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain Predicted protein(s) >gi|227860869|gb|ACLH01000051.1| GENE 1 133 - 2961 3446 942 aa, chain - ## HITS:1 COG:Cgl2538_1 KEGG:ns NR:ns ## COG: Cgl2538_1 COG2374 # Protein_GI_number: 19553788 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Corynebacterium glutamicum # 20 810 23 816 816 674 50.0 0 MHLTHIGSLAIAALVSTCIVAPQASAAADGSNAVISEVYGGGGNKGAAFTNDFIELYNPT SADLNLTGWSVEYLSASGNSGGKHELSGSLPAGGYFLIQEGGGDTGEPLPSPDAEGNLNL SGSKGSVKLYDASGAEVDLVGYGEASLSEGSPTKALNNSTSAQRDAEGTDTDDNSADFSA AAPTPKSGGSAAPQPDPTPTEPGATVTIPEIQGTGAESPLKGQNVTTQGVVTAVWQGEKS LNGFTIQTPGTGKTAPTEASEAVFVYTGGTGFYPEIGDSVEVTGTVDEYFGQTQIALSAG STLDDALSPVTPLALEALPEGDEEREKLESMLLKPGVHTVTDNYGLNRYGELGLAPGTEA LRQPTDIVSPGTQEQKDMEAANAAKYVILDDGSTRDFSRDGASTKLPYIMQNGSEVKTIR TTNQVEFADSGVILGYGHEQWRFQPTAMITGDSAAADLPITWDPARPEAPQVDGDYTVAA FNVLNFFINLGEDNGAKSYKDRFGNGVGSDSGTFRGAWSESAFNDQKGKILTALEGLDAD VIGLSEIENAANTVGGSYDDAVKYLVGELNSRAGSEKWDYVKAPANASADTDVIRTAIIY KKDRVKPVGEATLLEDARFKGTARTPLAAEFQPVSDRCAAEGPDSFVVVTNHFKSKGSVA NGDADTGDGQGNNPNVRNAHAQAVLDGLAKQPQWQEKATFVMGDLNAYSKEDAISVFRNA GYTIPVEELNAQEDWQDVASYQFSGRLGSLDHILANEHVDAQAAQTWNINSNEPIAMEYS RRNYTGGDVFEADNPYRSSDHDPVKVGFNLATVKRSADELKDCENPEEPDPSEEPAPSED PEPSDDDDKDVNKPTHSSGSSASERCLPTVLGLAIPAALAIPLAFLGVANTQFNIPGFEP VRKQIESMTRDIPREAQSAAGGLGLLAVLGIIGAACAPTESK >gi|227860869|gb|ACLH01000051.1| GENE 2 3191 - 3421 364 76 aa, chain + ## HITS:1 COG:Cgl2536 KEGG:ns NR:ns ## COG: Cgl2536 COG1828 # Protein_GI_number: 19553786 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component # Organism: Corynebacterium glutamicum # 1 75 1 75 81 103 81.0 8e-23 MARVVVNVMPKAEILDPQGQAVVRALGRLGVAGVSDVRQGKRFEIEVDDSVSAEQLEKVA STLLANTVIEDYEVIQ >gi|227860869|gb|ACLH01000051.1| GENE 3 3421 - 4083 713 220 aa, chain + ## HITS:1 COG:Cgl2535 KEGG:ns NR:ns ## COG: Cgl2535 COG0047 # Protein_GI_number: 19553785 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Corynebacterium glutamicum # 2 220 4 222 223 345 80.0 3e-95 MKIGVITFPGTLDDVDAARAARTAGADVVSLWHADEDLRGVDAVVVPGGFSYGDYLRSGA ISALAPVMRAVVEAANKGMPVLGICNGFQILTEAGLLPGALTRNQGLHFHCVDTYLEVAN AQTSWTSEFEQGQRILIPAKHGEGRFQADAETVERLEGEGRVVFRYTDNFNGSINGIAGI TNEAGNVVGLMPHPEHAIDLLTGPSTDGLGLFVSALKVVA >gi|227860869|gb|ACLH01000051.1| GENE 4 4112 - 6164 2626 684 aa, chain + ## HITS:1 COG:Cgl2534 KEGG:ns NR:ns ## COG: Cgl2534 COG0046 # Protein_GI_number: 19553784 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Corynebacterium glutamicum # 2 684 3 679 762 1038 77.0 0 MTVHNDTVEQAAAQPELEQPYRELGLKDDEYAHIREILGRRPTDAELTMYSVMWSEHCSY KSSKTHLRYFGETMTEEMGSKILAGIGENAGVVDIGDGNAVTFRVESHNHPSYVEPHQGA ATGVGGIVRDIMAMGARPIAVMDQLRFGPADAPDTKRVLPGVVGGISHYGNCLGLPNIGG ETVFDESYSGNPLVNALCVGTLKVDDLKLAFASGTGNKVMLFGSRTGLDGIGGVSVLASD TFEDGAERKLPAVQVGDPFAEKVLIECCLELYKSGIVVGIQDLGGAGLACATSELAAAGD GGMEINLDNVPLRAKDMTAAEILASESQERMCAVVTPENVEKFKEICAHWDVTCAEIGEV TTGKHLIIRHQGEVVVDAPAGTIADEAPVYDRPYARPEWQDALQEFKGVEKQDLTVALKK LVASPALCSRDFITEQYDRYVRGNTVQSHHANAGVLRIDEETGRGIAVSADASGRYTKLD PNMGTRLALAEAYRNVAVTGARPVAITNCLNYGSPENPDVMWQFRESVHGLADGAVELGI PVSGGNVSFYNQTGEEPILPTPVVGVLGVIDDVHKSIGNELGLVEEPEVLVLLGETKDEF GGSIWQQVSAREQGNESENGLNGLPPQVDLANEQRLADFFVGNEGVTAAHDLSEGGLAVT AFEMAKRSGVGLNLDLSKVHEDAF Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:17 2011 Seq name: gi|227860868|gb|ACLH01000052.1| Corynebacterium aurimucosum ATCC 700975 contig00114, whole genome shotgun sequence Length of sequence - 34733 bp Number of predicted genes - 34, with homology - 34 Number of transcription units - 22, operones - 9 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.500 + CDS 231 - 1847 969 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 2 1 Op 2 . + CDS 1847 - 2107 257 ## COG1937 Uncharacterized protein conserved in bacteria 3 2 Tu 1 . - CDS 2104 - 3141 1291 ## COG0627 Predicted esterase 4 3 Op 1 . + CDS 3026 - 3262 232 ## gi|262183514|ref|ZP_06042935.1| hypothetical protein CaurA7_05941 5 3 Op 2 . + CDS 3276 - 4085 729 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 4273 - 4310 0.3 - Term 4004 - 4051 0.1 6 4 Tu 1 . - CDS 4131 - 4754 612 ## cauri_2170 hypothetical protein - Term 4806 - 4851 11.8 7 5 Op 1 15/0.000 - CDS 4878 - 6962 2912 ## COG1960 Acyl-CoA dehydrogenases 8 5 Op 2 . - CDS 6991 - 8289 1515 ## COG0183 Acetyl-CoA acetyltransferase - Prom 8382 - 8441 2.7 + Prom 8334 - 8393 3.2 9 6 Op 1 7/0.000 + CDS 8475 - 9815 168 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 10 6 Op 2 . + CDS 9816 - 10745 661 ## COG2030 Acyl dehydratase + Term 10943 - 10995 0.3 11 7 Tu 1 . - CDS 10794 - 11816 914 ## COG1607 Acyl-CoA hydrolase 12 8 Op 1 . + CDS 11862 - 12266 143 ## cauri_2164 hypothetical protein 13 8 Op 2 13/0.000 + CDS 12277 - 13788 1368 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 14 8 Op 3 . + CDS 13810 - 14862 793 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase + Term 14893 - 14951 19.1 15 9 Tu 1 . - CDS 14981 - 15208 303 ## cauri_2161 hypothetical protein - Term 15365 - 15395 1.2 16 10 Tu 1 . - CDS 15397 - 16560 805 ## COG0354 Predicted aminomethyltransferase related to GcvT 17 11 Tu 1 . + CDS 16489 - 17376 721 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 17540 - 17579 0.0 18 12 Tu 1 . - CDS 17430 - 18104 903 ## cauri_2158 hypothetical protein - Prom 18297 - 18356 1.6 19 13 Tu 1 . + CDS 18168 - 19208 700 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 19354 - 19403 1.8 20 14 Tu 1 . - CDS 19205 - 20041 825 ## cauri_2156 putative secreted protein - Prom 20071 - 20130 1.6 21 15 Tu 1 . + CDS 20075 - 20989 602 ## COG0456 Acetyltransferases 22 16 Op 1 39/0.000 + CDS 21164 - 22273 1795 ## COG0226 ABC-type phosphate transport system, periplasmic component 23 16 Op 2 38/0.000 + CDS 22396 - 23442 1230 ## COG0573 ABC-type phosphate transport system, permease component 24 16 Op 3 41/0.000 + CDS 23456 - 24367 1264 ## COG0581 ABC-type phosphate transport system, permease component 25 16 Op 4 . + CDS 24421 - 25194 205 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 25221 - 25280 7.1 26 17 Op 1 1/0.500 - CDS 25337 - 26065 868 ## COG0704 Phosphate uptake regulator 27 17 Op 2 . - CDS 26131 - 27276 417 ## PROTEIN SUPPORTED gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase - Prom 27406 - 27465 3.3 + Prom 27370 - 27429 2.4 28 18 Tu 1 . + CDS 27453 - 28955 2312 ## COG0427 Acetyl-CoA hydrolase + Term 28972 - 29021 8.1 + TRNA 29047 - 29122 83.8 # Lys TTT 0 0 - Term 29114 - 29145 4.8 29 19 Tu 1 . - CDS 29198 - 29530 201 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 29740 - 29799 79.6 + TRNA 29614 - 29689 72.8 # Glu TTC 0 0 + TRNA 29723 - 29799 94.4 # Asp GTC 0 0 + TRNA 30043 - 30119 86.8 # Asp GTC 0 0 + TRNA 30137 - 30212 82.0 # Phe GAA 0 0 + Prom 30139 - 30198 80.0 30 20 Tu 1 . + CDS 30274 - 30567 260 ## COG2388 Predicted acetyltransferase - Term 30347 - 30399 1.7 31 21 Op 1 6/0.000 - CDS 30586 - 31158 759 ## COG1045 Serine acetyltransferase - Term 31159 - 31207 8.7 32 21 Op 2 . - CDS 31268 - 32203 798 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 32342 - 32401 1.7 + Prom 32324 - 32383 3.8 33 22 Op 1 . + CDS 32460 - 33299 733 ## COG2771 DNA-binding HTH domain-containing proteins 34 22 Op 2 . + CDS 33315 - 34589 1119 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 34611 - 34654 1.4 Predicted protein(s) >gi|227860868|gb|ACLH01000052.1| GENE 1 231 - 1847 969 538 aa, chain + ## HITS:1 COG:YPO3001_1 KEGG:ns NR:ns ## COG: YPO3001_1 COG0446 # Protein_GI_number: 16123182 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Yersinia pestis # 6 448 4 459 459 401 49.0 1e-111 MSHIPTTVIIGGVAGGMSTATRLRRNDEHRTIIILEASGHVSFANCGLPYYVGGVIPKRS SLLLQTPEALKQRFNLDVRVNTRVVSIDRDAKTVATEAGEVIRYDELVLSPGATPFLPPI AGIECAFTLRTVEDVDRIAAAVEDKKKAVIIGGGFIGLEMAENLHHRGLEVTLVEAAPQI MGPLDVEMAGIVAKHVRANGVRVLTNAQATEISETRVVLQDGQELEADIVIAAIGVRPAS ELAQAAGLEISERGGIVVDAQQRTSDPHIFALGDAATKKDFHSGADSLVPLAQTANRHGR LVADVITGRETASLPVLGTAIVGLFGLAAAATGWNERRARAEGKNVRVIHLHPANHAGYY PGAAQLHMKLVVDAENDAILGAQIVGEEGVDKRIDVIATAMRAGLSATDLADLELAYAPQ FGSAKDPINFAGFINDNIARGECTVQWHELQGRLDSGALLVDVRSPQEFAAGAIPGAVNI PLDELRERHGEIANHEDVIVHCQVGLRGHNATRLLNNLGYDVANLDGGYLTWVNGQEE >gi|227860868|gb|ACLH01000052.1| GENE 2 1847 - 2107 257 86 aa, chain + ## HITS:1 COG:Cgl0056 KEGG:ns NR:ns ## COG: Cgl0056 COG1937 # Protein_GI_number: 19551306 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 86 1 85 85 95 55.0 3e-20 MNLDPQEVKPSITRLKRARGQIDAVIRMLEAGEECESAITQLAAAAKAIDRAGYSIIATG LKQCYREEGADGIDAEKMEKLFLSLS >gi|227860868|gb|ACLH01000052.1| GENE 3 2104 - 3141 1291 345 aa, chain - ## HITS:1 COG:Cgl1002 KEGG:ns NR:ns ## COG: Cgl1002 COG0627 # Protein_GI_number: 19552252 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 91 336 152 404 411 134 33.0 3e-31 MLSFVSRSRRAAALVAAAMVALGTASASIGSASAQSSTIGEVSSRVTNPQPWLGDKAFIT AKRHMGGNHWVVDVWSPANHAVISNNVLLPEGDKPRPSFYLLPGVEGGQAGMNWMTHSDI RHWAVGKNVNVVMPLGGAYSLYTDWNAEDPILGVNKWNTYMTAELPPLIDAEFHGTGRDA IGGISSTGGAALDIAGHAPQRYKAAASYSGCPVRSGAIGFPTSTAMIAYGGGSSFNAWGL PGSPQWFEHDPNANPGRLRDVEVFVGSASGTPGPIDGTNSPAQLLGPRAVEMVANQCSEE FTRNARNAGVRVNRYFSPQGSHTFNLFSHQMKLSWDQTIARTIGA >gi|227860868|gb|ACLH01000052.1| GENE 4 3026 - 3262 232 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183514|ref|ZP_06042935.1| ## NR: gi|262183514|ref|ZP_06042935.1| hypothetical protein CaurA7_05941 [Corynebacterium aurimucosum ATCC 700975] # 40 78 1 39 39 65 100.0 1e-09 MVLDWAEAEPMLADAVPSATMAAATSAAARRERETKESIMWVVYGVSALELQISEEKLEE TFAPPLSATMLGRIVTGT >gi|227860868|gb|ACLH01000052.1| GENE 5 3276 - 4085 729 269 aa, chain + ## HITS:1 COG:Cgl2533 KEGG:ns NR:ns ## COG: Cgl2533 COG1272 # Protein_GI_number: 19553783 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Corynebacterium glutamicum # 34 267 19 252 254 280 65.0 3e-75 MRYAHDPHLRQGKAPTMNAPSAQKSSPQEFPVESGSVQENSTIEQLIQRTYWMADRGPRP LTRGWGHFFAAIASLIASTVLITFAWMTLPWWQGLAVTVYGVGVVGLFTVSALYHRWPWV TMRAVQWWRRADHATISVFIAATYTPLCAIVLEPTQALWMLTAAWVGAIMGVVLNLVWIN HPRWLDVVVYLVLGWLILPLLPNLWQSAGPAVVWLLFAGGVVYSVGALMYGFKWPGRNAR WYGYHEHFHTATIAAAVVHMVAIWMVVAG >gi|227860868|gb|ACLH01000052.1| GENE 6 4131 - 4754 612 207 aa, chain - ## HITS:1 COG:no KEGG:cauri_2170 NR:ns ## KEGG: cauri_2170 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 207 7 213 213 398 100.0 1e-110 MFSSSFPPSDDLLVSGTLRNDISLHLCHGHSRQDIHNDFIELLDDPSEWTTVRTDPFPED FDAIIDEVAAEYSQKVTEKSADAQRLDALRDELRQRNLAFSFDEGWDASDGAECGAEKAE EDDAAGYVYCHMQDIDRLIHTGDLFFGFGTMKTDAELSTPASVGEQLVEALRAVGFNPTW DGNPNARVLCQGLVVEFPLADDLTSSE >gi|227860868|gb|ACLH01000052.1| GENE 7 4878 - 6962 2912 694 aa, chain - ## HITS:1 COG:YGL205w KEGG:ns NR:ns ## COG: YGL205w COG1960 # Protein_GI_number: 6321233 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Saccharomyces cerevisiae # 121 489 133 506 748 178 32.0 3e-44 MALTKSSSDKKPVSPELNNQATTDAPKAEARSPHRLPTTPKLSVAAELAALLDGPHAAFR QELRTFLNDPELFPKADLSMAEQRQHTFENLSKVRDFGGFNHGLRSAHGGAGKPNLSTFT LEGLAWVDGSLAIKSGVQWGLWGGALDQLGTERHLDWINKAASLELPGCFAMTERGHGSD VQSLETTATFDPETDEFIINTPSDSAVKNYIGNAAKDGRAAVVFTQLITPDSDGRSHGVH AIIVPIRDENGNELPGVTLGDHGHKGGLVGVDNGTLRFDNVRVPRENLLNRFADVDEKGK YSSPIESKNARFFTMLGTLIRGRIGVSGAAGAATEASLDIAIRYANRRRQFEGATGAEKR LIEHRQHRRRLLIPLARTYALHLLYNQILERYQEQNDQQESGAWSVTEPTEEQKFASREM ESLAAAIKTAQTQHATRTIQECREACGGAGYMSENRLTTYRADSDVFATFEGDNTVLIQM VGKNLLTAYGRAMNDMSPWDTVKYAATTATDVVRRRYGFTTRLQSLVDRVNPSEASLFDA TYQAKLIDDRAQSILFSLVRRIQPARKADKVQAAAIVDQCQDHLIAAGWARVDTLLVQAM IEAEERLEEGSLARQVFEQLRHLFVFDTLVQHAGWYQEHNLIPAGRIKAARAAINDLVDS LAPWSIVLVDAFGVPPEVHNIPMLTEAGVDPLHI >gi|227860868|gb|ACLH01000052.1| GENE 8 6991 - 8289 1515 432 aa, chain - ## HITS:1 COG:PA4785 KEGG:ns NR:ns ## COG: PA4785 COG0183 # Protein_GI_number: 15599979 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 7 432 6 425 425 503 63.0 1e-142 MTNPPHRVAILGGNRIPFARSNTQYAHASNQDMLTSALDGLVARYGLHDERLGLVAAGAV LKHSRDFNLTRESVLGSALDSTTPAIDVQQACCTSLAAAIHVGDAIAQGRISAGIAGGTD TTSDAPLAVNDTLRRTLLNLTRAKTAAQRAQLVGSIRPSQLAPEQPQNGEPRTGLSMGDH AAITAREMNVSREAQDELALASHQNLHKAWEEGFFDDLTTGFLGVNRDTNLRPDSSLESL AKLKAVFGKRDAEQHGAQATMTAGNSTPLTDGASVALLSSEEWAVEHNIEPRAFLLDSET AAVDFVHGPDGLLMAPTYAVPRLLERNNLSLQDFDFYEIHEAFASQVLATLSAWEDETYC RERLGLQSALGSIDRAKLNVKGSSLAAGHPFAATGTRILATTAKILEENGGGRALISICA AGGQGVAAIVER >gi|227860868|gb|ACLH01000052.1| GENE 9 8475 - 9815 168 446 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 209 440 7 238 242 69 28 3e-11 MPHVTFAEKLINSPLAAKAGVPQGHPLRRHKAGEPALDGPIVIGGQGRIAEFLRSQLAVD YQVINSSAEAKRAALVFDATGLDTPEQLRELYDFFNPQMRNLLPCARLVVVGTTPEAADT IDARISARALEGFTRSLAKEMRKGGTVNLVWVDPAATAEVESTVRFFLSGKSAFVDGQVV RVSAQGQVPSVHSGGAQNWEQPLDGRLAVVTGAARGIGATIAEVLARDGASVICIDVPQA SEHLAKTANKVKGTALPLDVTDLQAADKIAQHAQERHGRAIDVIVHNAGITRDKLLANMN EGQWDAVLAVNLLAPVRITENLLESGSLAPGASVVGVSSMAGISGNRGQTNYATTKAGII GLVDALRPVLAENGSTINAVAPGFIETAMTAAMPTGPREIGRRLNSLQQGGLPVDVAETV AFFASPASAAVSGNTVRVCGQNLMGA >gi|227860868|gb|ACLH01000052.1| GENE 10 9816 - 10745 661 309 aa, chain + ## HITS:1 COG:ML2566 KEGG:ns NR:ns ## COG: ML2566 COG2030 # Protein_GI_number: 15828379 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mycobacterium leprae # 5 288 20 286 300 184 39.0 1e-46 MNVTTLNEIPDLPALYRSLMVGAVPIPGLGAGKRKVDDPQTAYRVAGVRVDTEHLARYCQ ATGLRLGNELPATYLYALAFPLAIKVMAAQDFPFPAVGVVHLSNRIEQQRPLRVDESCDV TVHAENLRPHRKGLVIDMVTTYSVDGEEIWRQTSVFLGQGTKFTKDTPLQVRTRPEAERF LDFPGDEVGTPTATLRFSAESTRVYAAASGDKNPIHVSTVGAKLFGFPAPIAHGMYTHAR MLSVLDGTLPGAVRISADFYKPVILPATTGVFVAPSVATNSEIGARTVTLRKAKDPSSLH VACHVEPLD >gi|227860868|gb|ACLH01000052.1| GENE 11 10794 - 11816 914 340 aa, chain - ## HITS:1 COG:Cgl2532 KEGG:ns NR:ns ## COG: Cgl2532 COG1607 # Protein_GI_number: 19553782 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 16 330 15 329 339 509 78.0 1e-144 MPPSSSEEKKPVPTGKSPSLTLRFMAAPTDLTIAGAQGIGGGRVLEWIDKAAYACAVQWS GTYCVTAYVGHIHFTRPIPSGHLVEVRSRIAMTGRSSMHIVNEVLSADPRDGIFTRACDC LVIFVAKDTETGKSVAVPPLIPDTTEHQRVWEAAESRIELRQAIEAEMEKQTYDGPSDAP RMVNRFLAKPTDVNWGGNVHGGTAMEWIDEAGAACTMEWSGEHTVAVYAGGIRFYRPIHI GDLIEVDARMMRTDTRSMQMSIHVRSGNPRGGREKLETAIHATVAYMGMDADWQPLAARQ FTPRTEEDKRLWEHAGILRELRGKYSPKPLVVAPQHQHID >gi|227860868|gb|ACLH01000052.1| GENE 12 11862 - 12266 143 134 aa, chain + ## HITS:1 COG:no KEGG:cauri_2164 NR:ns ## KEGG: cauri_2164 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 134 1 134 134 243 100.0 2e-63 MKKAVDVATTRAAVEAVEEWIRDPEGVEKPGRPALAKATRTTARLLEADAPGHSVELRVP PFVAVQCIAGPRHTRGTPPNVVETDPQTWLQLATGVLDWEQALHDGRVDASGSRSHEIAG CLPVIPLVFTGRNS >gi|227860868|gb|ACLH01000052.1| GENE 13 12277 - 13788 1368 503 aa, chain + ## HITS:1 COG:Cgl2530 KEGG:ns NR:ns ## COG: Cgl2530 COG0034 # Protein_GI_number: 19553780 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Corynebacterium glutamicum # 4 503 17 515 515 714 69.0 0 MVAEHVQSMTKPLSTDPSLDPEPREECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGI AVGDDDRIVVFKDMGLVSNVFDESILTSLHGNVAVGHTRYSTAGGKEWSNVQPMFGTSPS GVDIALGHNGNLVNYQELRAEAVERGLIKPQEESVSDSMCLSILLADGVSEDRSVFDSAL QLLPTVQGAYCLTFTDGHTLYAARDPHGVRPLALGRLNTGWVVASETCALDIVGAQFIRE IEPGELVAIDETGIRSERFAETKRHGCVFEYVYLARPDTNIKGRSVNATRVEIGRRLARQ YPAPDADMVIPVPESGNPAAVGYARESGLTFAHGLVKNSYVGRTFIQPTQSQRQMGIRLK LNPLREVIEGKSIVVVDDSIVRGNTQRALIRMLREAGAAEVHVRIASPPVKWPCFYGIDF ASPGELIANANPSDDPEEVAQTICTAIGADSLGFVSTDEMVAATQQPRNELCCACFDGEY PLGLPAGNPNAEAVRTLQGSTTN >gi|227860868|gb|ACLH01000052.1| GENE 14 13810 - 14862 793 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 5 332 13 338 356 310 49 1e-83 MSENTYAAAGVNIEEGDRAVELITPHAKRATRPEVMGGLGGFAGLFKLGDYKEPVLAAGS DGVGTKLAVAQAMDKHDTIGIDLVAMCVDDLVVCGAEPLFLQDYIAVGEVVPEKVAEIVK GIAEGCVQAGAALLGGETAEHPGVMGKDEYDVSATAVGVVEADELLGPDKVRDGDVLIAM KSSGLHSNGYSLARYVLLEQAGLPLDGYMEDLGRTLGEELLEPTRIYAKDCLALVSECAV STFCHVTGGGLAGNLERVIPEGLTAEVSRSTWTPGQIFKTISSVGKVALEEMEKTFNMGV GMIAVVAPEDRERALAMMTARHVEAWELGTVRVAEEGEPRVLMTGEHPGF >gi|227860868|gb|ACLH01000052.1| GENE 15 14981 - 15208 303 75 aa, chain - ## HITS:1 COG:no KEGG:cauri_2161 NR:ns ## KEGG: cauri_2161 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 75 1 75 75 87 100.0 2e-16 MGRGRAKAKQTKVARQLKYNSPEMDLDSLQRELASQNSKRSRDEDEDPYSEYADYEDYAD RWDSNEWDEDDSDAR >gi|227860868|gb|ACLH01000052.1| GENE 16 15397 - 16560 805 387 aa, chain - ## HITS:1 COG:Cgl2527 KEGG:ns NR:ns ## COG: Cgl2527 COG0354 # Protein_GI_number: 19553777 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Corynebacterium glutamicum # 37 386 25 372 373 371 56.0 1e-102 MAPHRPSKRFHNVDNRLFPALKAHRPDYALPSEGVSYSSPLLSRPGAAEFQGTTLVDASG VPWHYGNPLVEQRAVETGSAIIDRSHRRVIAVSGPDARAFLHNLLSQKLDDVDSGFSAGA LDLNIQGHVLHHMDLSFDGETFYLDVPTAQFESLRDFLTAMVFWSQVTVEEADAAVITVL GQPLQKPSAALVERSVQWPGCPRQDFLVPRQQLDAAVAELEKQGGSLAGLMAYTAERVRA REPELAGDLDEKTIAHEVPQWIRRNDDVPAFVHLEKGCYRGQETVARVENLGRSPRLLVM LYLDGSAPERPDSGADITLGGRRVGRLGTVVEDCDYGPIALGLIKRSALNHGDLNIGPVA ASVEPDSIPTDEGPKAGRAAVDRLRGK >gi|227860868|gb|ACLH01000052.1| GENE 17 16489 - 17376 721 295 aa, chain + ## HITS:1 COG:Cgl2526 KEGG:ns NR:ns ## COG: Cgl2526 COG0115 # Protein_GI_number: 19553776 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Corynebacterium glutamicum # 30 294 1 281 281 268 52.0 1e-71 MSLQRRKEPVIYVVEPFGGSVRRHMPNLPLVYWDDAAVTRGDGIFESLLVRNGKAANFHR HAERFRHSARALDLPEPPMHKWQEATELAIADFYGPDGAEGEKGSSREAKCTWTYTRGRA STGVPTAWVVVQEVPDAVVAQRETGVKVMSTPRLWQVAEELPAKTLNYAATMATLRLARE RGFDDVIFTDPDTGLVLEGATSTVVAVKGSKLRTPAGKGILPGTTQAALFEYASEQGYRC KAKELDLRYLEEADSVWLVSSVRTAVRVTRLDGKKLKAPANAEEIRALIDAALAR >gi|227860868|gb|ACLH01000052.1| GENE 18 17430 - 18104 903 224 aa, chain - ## HITS:1 COG:no KEGG:cauri_2158 NR:ns ## KEGG: cauri_2158 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 224 1 224 224 402 100.0 1e-111 MSEQTNSENQTENTHPENTKIDGNAAVNQAAEAWKDAASRNIPTVDVADNPLPDETANLR QGPSLHDGLLGLLPLVGVWQGEGQAHSTDGEQYAFGQQLIIAHDGENYLTYTSRTWKIDS EGKPVGPDVRESGFWRISLKDEIEMTYTSSNGINEIFYGSLFNERAWQLESASTMVTETG PTNLGPGKRMYGLMPNNNLGWVDERLVDGEMRPFMSAELTRVAG >gi|227860868|gb|ACLH01000052.1| GENE 19 18168 - 19208 700 346 aa, chain + ## HITS:1 COG:Cgl2524 KEGG:ns NR:ns ## COG: Cgl2524 COG1597 # Protein_GI_number: 19553774 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Corynebacterium glutamicum # 1 345 15 367 372 367 51.0 1e-101 MRVLLISNPNSTSQNSALFREVLPVIRDVEGLQLLARFTHYPGHAQDMVRGMTREDFDVI LVFGGDGTVNEVVNGLLGPADSANRPSPQEIPVLAVIPTGSANVFVRALGFPNTPVEAAH VLARMLERNTRRTVSLGVWNDRWFAVNAGFGLDADVLARVDRAREMGFSATPLRYLAVAF QAYQRARIRPPRISVRARSSAGETFAADDVPVMFTSNTNPWTFLGPLPVVTNPRNSFDQG LGLFGVSDLGGIDGLVGVLHLFGVDHRHWLNKVTDARTLHFEDAVAVDLVCPKPHRFQAD GESEGTFTEVHLESEADALEVFAPVDPAPPMHRNIRRILRDLVRIN >gi|227860868|gb|ACLH01000052.1| GENE 20 19205 - 20041 825 278 aa, chain - ## HITS:1 COG:no KEGG:cauri_2156 NR:ns ## KEGG: cauri_2156 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 278 1 278 278 497 100.0 1e-139 MTVIYLSRNLVRLAAVAGVVLTAWLADSAVAMHAEHTVAQQAKTSSQLENTPNVYIGGVP FTLGAFTKEIPYLEVKSSDVEVPKLGMVNASTTLRDITIRPEQLFSGELEGSPVSTYTRS ISLDGVALGRMLGITDLSIANPDDMSPTGGTSAEAELTGTLPGDNTKSTATVTLRLVGPE FRMSVYGTDDERLKKAFGLVLDTRQLPLPSQATSVKLHGGSITFEVQRRNITLKTAQLSP LEIDGSEEKAVEDAAQKAQDTANEVGSAPTTPPSWRQN >gi|227860868|gb|ACLH01000052.1| GENE 21 20075 - 20989 602 304 aa, chain + ## HITS:1 COG:Cgl2522 KEGG:ns NR:ns ## COG: Cgl2522 COG0456 # Protein_GI_number: 19553772 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Corynebacterium glutamicum # 3 302 7 292 292 237 47.0 3e-62 MNIETNTVPQNLDLAQRVEELAAAAETHDGVAPLSEQFLIGLRDDRLGHRHLLAIEGDEV LGVAALDGQTVELFVGVDNRGRGIGKALVDALPASPQIWAHGNLPAAQALAKRNEMDVVR RLLVMAIEGRDLRAAEEAPTTVDGLEIQTYTESVERFGREHVEAEWVRTNNEAFSWHPEQ GGWDLERLHRGMEAEWFDPADVLFLWDSHGGAHSAPTMAGFHWLKWHAEDTPAFGEVYVV GLAEDYRGRGLGGPLLTAGLQRMVEKGADKVILYVEADNDPAVKAYERLGFSIAEEHCVW AKSD >gi|227860868|gb|ACLH01000052.1| GENE 22 21164 - 22273 1795 369 aa, chain + ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 5 369 5 375 375 355 58.0 6e-98 MIRNFKRTAAIFGIVAATSTALVACSESNDSGSAEGGSEGSDVSGELVGDGASSQQNAMS YFQTAFSEDHPNASLSYNASGSGAGVEAFTNGQADFAGSDSALKEDDGEVEAAAERCGGN EAWHLPTTIGPVAIAYNLEGTEINLSTETLAKIFKGDITKWNDEAIAADNEGTDLPDEDI TVIFRSDESGTSANFQKFLKAATGDWDTEGKQFPDAVGEGANGSAGVADQVANIKGAITY VESGFADQKEADGVQKAKIDFGHGPVELNTESVNVALENLEFKETESEHNMVVDSDALFA SDDEGAYPLILTTYNIVCSAGYDEETSALVKAFFNTVLDHQDDQLASQGFIPVEGAHLDK LKAAVDALQ >gi|227860868|gb|ACLH01000052.1| GENE 23 22396 - 23442 1230 348 aa, chain + ## HITS:1 COG:Cgl2520 KEGG:ns NR:ns ## COG: Cgl2520 COG0573 # Protein_GI_number: 19553770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 34 347 40 353 355 413 74.0 1e-115 MADNNLTTAPEQTELSVPAAERLSTGGSEELATATSSSGVKRPGDRIFEFLSSASATLIT VMIAAIAGFLLWRAVPALGVNDGGILGFFTYGGRWETSDTSAMKFGIPTMFGTTVLISVF ALLLAMPVALAIAIFLSNYAPARLVKPLGFLVDMLAAVPSIVYGLWGWQVLGPALSGFYS WLESWAGGFFLFTVFDNSPSFATGRNLFTGGIVLAVMILPIIAATAREVFVQTPPGQIES ALALGATRWEVIRMTVLPFGMSGYIAGSMLGLGRALGETMALYMVVSPLVDFRFSLFDGG TTFAMAIALASAEFGNEMRAGAYIAAGLMLFLLTFVVNAIARAIVKKK >gi|227860868|gb|ACLH01000052.1| GENE 24 23456 - 24367 1264 303 aa, chain + ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 8 303 12 307 307 377 73.0 1e-104 MTTTANAKPASAGATFLDISSSRKATNTIATVVVWAAMILAMVPLVWVLWELFARGSGII FSADWWTTSQRGVMNSVAGGGAAHAIIGTFVQTILASIISIPIGIFTAIYLVEYSKGGWL ARTTTFMVDILSGVPSIVAALFIFAMWITLFGFGRSGFAVALSLVLLMIPIVVRNTEEML RVVPMDLREASYALGVPKWKTIARIVLPTALSGIVTGIMLAIARVMGESSPVLVLVGSSS IINWDAFKGSQSSLPLMMLDMYKAGAQPAVLDKLWGAALTLVILIAILNIAARVISAKFS VKK >gi|227860868|gb|ACLH01000052.1| GENE 25 24421 - 25194 205 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 19 212 21 207 223 83 31 2e-15 MSKLALNDVNIYYGDFHAVQNVNMQIPAKAVTAFIGPSGCGKSTVLRTLNRMHEVIPGAY VKGEVLLDGQDIYGSKVDPVSVRNTIGMVFQKANPFPTMSIEDNVVAGLRLSGEKNKKKL KEVAEKSLRGANLWDEVKDRLDKPGGGLSGGQQQRLCIARAIAVEPEVLLMDEPCSALDP ISTLAVEDLIHELKENFTIVIVTHNMQQAARVSDKTGFFSLEATGRPGHLVEFDDTTKIF ENPSKKDTEDYISGRFG >gi|227860868|gb|ACLH01000052.1| GENE 26 25337 - 26065 868 242 aa, chain - ## HITS:1 COG:Cgl2517 KEGG:ns NR:ns ## COG: Cgl2517 COG0704 # Protein_GI_number: 19553767 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Corynebacterium glutamicum # 27 240 1 214 218 215 54.0 7e-56 MRAAYREQLDNFSHDLIIMSTTVHKLMALASQALIKASLQPAEEAVSLRDELDEVRSRCE DRAVSLLALENPMAKDLRQVISSIYIVEDFYRMGRLSQHIATSARRRHPEPVVPADIMGY FEEYARLVLDMSAGLKDILITRDPELALRLTEDDDAVDDINQHLMRMLTQREWKGTVRQA VETSQLSRYYERFADHCAAAAGRIIYLATGLDPDRYMRKRDQEQREAELEARMAELERQF HN >gi|227860868|gb|ACLH01000052.1| GENE 27 26131 - 27276 417 381 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] # 3 329 28 337 353 165 33 4e-40 MTLAIGKIQLNSPVVLAPMAGVTNVAFRVLCREQEIEKTGTVSGLYVCEMVTARALVERN PKTLHMTTFDPQEQPRSLQLYTVDPEYTYKAAKMIVDENLADHIDMNFGCPVPKVTRRGG GSALPYKRRLFGNIVAAAVKATEGTDIPVTVKMRVGIDEEHKTHLDAGRIAVAEGAAAVA LHGRTAAQRYSGHADWGEIARLKEHLADTGIPVLGNGDIFKATDAHDMMKQTGCDGVVVG RGCLGRPWLFAELSAHLRGEPVPEEPTLGEVTRIMIRHAELLAQHEGEAQASRDIRKHIG WYLRGFPVGGQVRAGLSRVNSLNDLRELLAPWADSPALADDADGARGRQGSPAKVVLPEG WLDDPEDATVPEGAEIMHSGG >gi|227860868|gb|ACLH01000052.1| GENE 28 27453 - 28955 2312 500 aa, chain + ## HITS:1 COG:Cgl2515 KEGG:ns NR:ns ## COG: Cgl2515 COG0427 # Protein_GI_number: 19553765 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Corynebacterium glutamicum # 1 500 1 502 502 741 71.0 0 MSERIAYAPFEKLVMSADEAAKFVNHGDRVGISGFTGAGYPKALPTAIAEKAKAAHEAGE EFKIDVFSGASTAPDCDGVLAEANAIRFRSPYNSDPVLRGRFNDGSALYQDIHLSHSGQQ VEEGFYGDFQVAIIEAVRIDEKGNIVPSSAVGNNLEYIEAADKIIIEVNEWQSLNLEGMH DIYRIEKLPNRQPIPITKPADRVGTTYIEIPEEKVVAVVKTNAPDRNAPFKAPDEVSEKI AANFIEFLEGEVAAGRLEYDKFIMQSGVGNVPNAVMAGLLDSKFENIQAYTEVIQDGMLD LIDAGKMTVASATSFALSPEYADKMNAEAERYAKHIILRPQQVSNHPEVIRRVGLISSNG MIEGDIYGNINSTNVSGSRIMNGTGGSGDFTRNAYISTFVSPSVAKDGAISAIVPFVSHT DHTEHDTMVIITEYGVADLRGLAPKERVEKIIAVAHPDYRPLLEEYFERAKANKFQHTPH DLKTAFDFQVNFMEKGDMRG >gi|227860868|gb|ACLH01000052.1| GENE 29 29198 - 29530 201 110 aa, chain - ## HITS:1 COG:Cgl0381 KEGG:ns NR:ns ## COG: Cgl0381 COG1937 # Protein_GI_number: 19551631 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 10 110 6 100 100 102 60.0 2e-22 MPDQRDTCSCHEPGMHGYNSDDEQKARYLARLKRIEGQTRGIHRMIAEDQYCIDIITQIS AVTSALENVSLALLEDHIEHCVAGAAAEDGQVASEKLEEAMRAIRKLVKS >gi|227860868|gb|ACLH01000052.1| GENE 30 30274 - 30567 260 97 aa, chain + ## HITS:1 COG:Cgl2510 KEGG:ns NR:ns ## COG: Cgl2510 COG2388 # Protein_GI_number: 19553760 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Corynebacterium glutamicum # 5 92 9 96 96 94 54.0 7e-20 MTTSVAHQTDQSRFVIIVDGEEAGFAEYSDSATTREFTHTEIYEAFQGQGLSKPLIKAAL DDDSTLSRQVIPTCSAVARFIEKNPEYQRLTNREGSL >gi|227860868|gb|ACLH01000052.1| GENE 31 30586 - 31158 759 190 aa, chain - ## HITS:1 COG:Cgl2509 KEGG:ns NR:ns ## COG: Cgl2509 COG1045 # Protein_GI_number: 19553759 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Corynebacterium glutamicum # 9 190 1 182 182 311 86.0 6e-85 MVRMHILKMIREDLANAREHDPAARGDVENAVVYSGLHAIWAHRIAHRMWKRGWRGPARI LAQVNRFFTGIEIHPGATIGRRFFIDHGMGIVIGETAEIGDGVMLYHGVTLGGQVLTQTK RHPTIEDNVTIGAGAKVLGPITIGEGSAVGANAVVTKDVPANHTATGIPAKNRPRKKDER IKLVDPDYYI >gi|227860868|gb|ACLH01000052.1| GENE 32 31268 - 32203 798 311 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 306 1 305 308 311 52 3e-84 MAVYDNILDTIGGTPLVRLNRLTEGLDAEVLVKVESFNPANSVKDRIAKAIVDTAVESGE LKPGGTIVEATSGNTGIGLALVGAAQGYKVILTMPETMSNERKVLLRAYGAEIVLTPGAA GMKGAVEKANEIIAETPNAILASQFANEANPKIHEATTGPEIWEDAEGKVDAFVAGVGTG GTVTGVGRYLRSQNPDTYLVAVEPSDSPVLSEGKAGPHKIQGIGANFVPEVLDREILNEV LTATAEESVSTARKLATEEGLLVGISSGANVSAALKLAARDEFKGKTIVVVAPDFGERYV STILFEDIREA >gi|227860868|gb|ACLH01000052.1| GENE 33 32460 - 33299 733 279 aa, chain + ## HITS:1 COG:Cgl2507 KEGG:ns NR:ns ## COG: Cgl2507 COG2771 # Protein_GI_number: 19553757 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Corynebacterium glutamicum # 1 279 1 281 281 407 82.0 1e-113 MEPHRLKDDDEAVRAALSSLKTATGIPVTMYGTLLPDNRLQITQWVGLRTPALQNLVIDA NVGVGGRVVSTRRAVGVSDYTRATTISHENDRYIQDEGLHSIVAVPVTVQREIRGVLYVG VHSPVRLGDKVIEEVTMTARCLEQDLAVNSALRRADGGKGGAARGHVMNGAEWEQVRSTH SKLRMLANRVNDEDLRKELEALCDQMVSPVRVKQSTKLSARELDVLSCVALGHTNVEAAE EMGIGAETVKSYLRSVMRKLGAHTRYEAVNAARRIGALP >gi|227860868|gb|ACLH01000052.1| GENE 34 33315 - 34589 1119 424 aa, chain + ## HITS:1 COG:Cgl2505 KEGG:ns NR:ns ## COG: Cgl2505 COG0766 # Protein_GI_number: 19553755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Corynebacterium glutamicum # 3 417 1 415 418 655 82.0 0 MGVKDQFIVSGGARLQGTVKVDGAKNSVLKLMAAALLAEGTTTLTNCPEILDVPLMRKVL EGLGCTVEIDGHTVRITTPAELHSNADFDAVRQFRASVCVLGPLTARCGHAKVALPGGDA IGSRPLDMHQSGLEKMGARTRIEHGAVVAEADRLHGANIRLDFPSVGATENILTAAVLAD GETQLHNAAREPEIVDLCTMLKEMGAEISGEGTSTITIQGVDKLQPTEHEVIGDRIVAGT WAYAAVMTRGDITVGGIAPKHLHLPLEKLKSAGADVEDYVNGFRVRMNGRPSAVDYQTLP YPGFPTDLQPIAIGLSAVAEGTSIITENVFESRFRFVDEMLRLGADAQVDGHHVVIRGQE RLSSTHVWSSDIRAGAGLVLSALCADETTTVHDVFHIDRGYPNFVENLQALGATIERTQE EELY Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:41 2011 Seq name: gi|227860867|gb|ACLH01000053.1| Corynebacterium aurimucosum ATCC 700975 contig00115, whole genome shotgun sequence Length of sequence - 806 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:42 2011 Seq name: gi|227860866|gb|ACLH01000054.1| Corynebacterium aurimucosum ATCC 700975 contig00121, whole genome shotgun sequence Length of sequence - 603 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 603 291 ## cauri_0381 hypothetical protein Predicted protein(s) >gi|227860866|gb|ACLH01000054.1| GENE 1 3 - 603 291 200 aa, chain - ## HITS:1 COG:no KEGG:cauri_0381 NR:ns ## KEGG: cauri_0381 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 200 82 281 378 399 100.0 1e-110 VSKIKKTLDAWNLRAKLAATPAHRIPTVAATRLKELRSKRTAKPGVRITYRSEGPNTLSI TDDATTIANMRGVLESTNNTDLLKAANDIFFKESGGSKPAVRTQVIITLNELDQIINGDG DEIELNLTNGGRMTGKEFLTHKFAEIGYATIVHPLDGPINTWRLSRGANLNQRLTLHAEF HTCSRPGCNKPADYCHVHHL Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:46 2011 Seq name: gi|227860865|gb|ACLH01000055.1| Corynebacterium aurimucosum ATCC 700975 contig00122, whole genome shotgun sequence Length of sequence - 718 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 591 130 ## cauri_1501 putative transposase - Prom 632 - 691 1.8 Predicted protein(s) >gi|227860865|gb|ACLH01000055.1| GENE 1 3 - 591 130 196 aa, chain - ## HITS:1 COG:no KEGG:cauri_1501 NR:ns ## KEGG: cauri_1501 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 196 1 196 507 387 100.0 1e-106 MSPYIRTVKTASGATAVQVVWSEHRGSKKLQQVGSGHSPDQVEQLKAQARRLIDADQLTL DLGVEPSASRGTADDPVPVTAQRAGYLLDCIDACFNELGLAVATGDDQVFRDLVRARLIN PGSKFDSIETLAEVGVTSASYATIKRRLPGFATDAFGEGLTQVLAHHAGIGPGTFILYDV TTLYFETDTPDELRKP Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:32:51 2011 Seq name: gi|227860864|gb|ACLH01000056.1| Corynebacterium aurimucosum ATCC 700975 contig00124, whole genome shotgun sequence Length of sequence - 3555 bp Number of predicted genes - 10, with homology - 8 Number of transcription units - 2, operones - 2 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 377 358 ## cauri_1942 hypothetical protein 2 1 Op 2 . - CDS 425 - 652 143 ## 3 1 Op 3 . - CDS 637 - 867 155 ## cauri_1943 hypothetical protein 4 1 Op 4 . - CDS 864 - 1220 405 ## cauri_2013 hypothetical protein 5 1 Op 5 . - CDS 1217 - 1453 61 ## gi|262183553|ref|ZP_06042974.1| hypothetical protein CaurA7_06146 - Prom 1640 - 1699 3.6 6 2 Op 1 . - CDS 1878 - 2093 195 ## 7 2 Op 2 . - CDS 2096 - 2419 292 ## gi|262183554|ref|ZP_06042975.1| hypothetical protein CaurA7_06151 8 2 Op 3 . - CDS 2412 - 2810 449 ## cauri_2014 hypothetical protein 9 2 Op 4 . - CDS 2803 - 3198 295 ## cauri_1946 hypothetical protein 10 2 Op 5 . - CDS 3191 - 3391 296 ## cauri_2016 hypothetical protein Predicted protein(s) >gi|227860864|gb|ACLH01000056.1| GENE 1 2 - 377 358 125 aa, chain - ## HITS:1 COG:no KEGG:cauri_1942 NR:ns ## KEGG: cauri_1942 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 125 18 142 148 246 100.0 2e-64 MWCDFPDPDERTNLAIYVGDSPNHKGFCELIHEGQLGTLTIPENLTPRLDLPRAWAPDGQ PVPGEWEDGHVFVSYDDPDPWILKDAVSIEGLSEGGMSYYDAPPNGIEVKLDKFGEGEGK ARRWV >gi|227860864|gb|ACLH01000056.1| GENE 2 425 - 652 143 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGESMRPHKIRVSPRGVTLDGIPLIHSDEAPRVETLSPNLHRVHLAVYADSVQLDGDSHQ LPEATPIYDRIKGQA >gi|227860864|gb|ACLH01000056.1| GENE 3 637 - 867 155 76 aa, chain - ## HITS:1 COG:no KEGG:cauri_1943 NR:ns ## KEGG: cauri_1943 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 76 1 76 76 130 100.0 2e-29 MTPEDARYWLGDGTRPPIIPPYIAQQALETIAAMDYQEVDYRPPRFYTVDEPTEKGPDLG GHATRARRLTGPWEKA >gi|227860864|gb|ACLH01000056.1| GENE 4 864 - 1220 405 118 aa, chain - ## HITS:1 COG:no KEGG:cauri_2013 NR:ns ## KEGG: cauri_2013 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 229 100.0 3e-59 MTIKGFRINNKGHAALIAMRENNKQDEEVPAHYRIANELAEAGLLAEDLPKPSRGMGSGG AVWYLPGPIGDIRRMREHIVIFGHDCQEKSFRLVLNEAEADTIGRTILAASKHKEGEE >gi|227860864|gb|ACLH01000056.1| GENE 5 1217 - 1453 61 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183553|ref|ZP_06042974.1| ## NR: gi|262183553|ref|ZP_06042974.1| hypothetical protein CaurA7_06146 [Corynebacterium aurimucosum ATCC 700975] # 1 78 137 214 214 157 98.0 2e-37 MGHPLSGRNLDPGQLNRHGKRRCLACQRAHGAIQGRKQYKVIFKQLADLKYQDIINGTKT KIYLADLLAAAQYAKEEA >gi|227860864|gb|ACLH01000056.1| GENE 6 1878 - 2093 195 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNFDQALHILEAARRPGDLRIHPTDAVEALANAGLLMPEEKPAVNWYNGNNKPAPAGAT NTTRGPNPKSR >gi|227860864|gb|ACLH01000056.1| GENE 7 2096 - 2419 292 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183554|ref|ZP_06042975.1| ## NR: gi|262183554|ref|ZP_06042975.1| hypothetical protein CaurA7_06151 [Corynebacterium aurimucosum ATCC 700975] # 1 107 1 107 107 209 100.0 6e-53 MSKHSRAAKAIKFGIKRGYAPDQIATLLDKFGLLAEDLLEPSFVVKGVEHEYPVWDATHR FTVEAQSGSSDVKIRCYYDPGESLTLAQARTIRQALHAAENYAENQE >gi|227860864|gb|ACLH01000056.1| GENE 8 2412 - 2810 449 132 aa, chain - ## HITS:1 COG:no KEGG:cauri_2014 NR:ns ## KEGG: cauri_2014 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 132 1 132 132 246 100.0 2e-64 MDKDKLHRSLAHIAAGADKMAQAAHIITHGMKNGDSPARIARHLADYGLLTPGPPEPCIY PDTGEHEWHMDDGYVSVEGGIIHVIHDETNDDNEPDALMPDWAELRFSTTTKGRETAYAI LAACNHKDAQDE >gi|227860864|gb|ACLH01000056.1| GENE 9 2803 - 3198 295 131 aa, chain - ## HITS:1 COG:no KEGG:cauri_1946 NR:ns ## KEGG: cauri_1946 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 131 1 131 131 240 100.0 1e-62 MTDLSTANLKRLLAEATPGPWRAEVGAAGVPEGWDEHWLALHMGHNSMYDVGREPPAEEE YANFKLAALAPQLAQEVLRMREELRELRDQLKKRSEHYGKVELSTDPLDGIQLEDNYAED EISRILGDHDG >gi|227860864|gb|ACLH01000056.1| GENE 10 3191 - 3391 296 66 aa, chain - ## HITS:1 COG:no KEGG:cauri_2016 NR:ns ## KEGG: cauri_2016 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 66 169 234 234 135 100.0 5e-31 MAEEEWDDDKHYLAEAEHVSWGKMVMIYHDRFGSIRCAVKGEVYIAAREDLTPTGKRYTL TEVQDD Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:34:15 2011 Seq name: gi|227860863|gb|ACLH01000057.1| Corynebacterium aurimucosum ATCC 700975 contig00125, whole genome shotgun sequence Length of sequence - 142731 bp Number of predicted genes - 132, with homology - 128 Number of transcription units - 77, operones - 30 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 81 - 129 10.3 1 1 Op 1 10/0.000 - CDS 169 - 924 248 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2 1 Op 2 11/0.000 - CDS 921 - 1913 949 ## COG4605 ABC-type enterochelin transport system, permease component 3 1 Op 3 6/0.000 - CDS 1976 - 2977 856 ## COG4606 ABC-type enterochelin transport system, permease component 4 1 Op 4 . - CDS 3013 - 4044 1513 ## COG4607 ABC-type enterochelin transport system, periplasmic component - Prom 4094 - 4153 2.9 5 2 Op 1 4/0.182 - CDS 4218 - 5573 592 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 6 2 Op 2 . - CDS 5578 - 7248 2019 ## COG2978 Putative p-aminobenzoyl-glutamate transporter - Prom 7297 - 7356 3.3 7 3 Tu 1 . + CDS 7278 - 7448 77 ## - Term 7441 - 7477 0.0 8 4 Tu 1 . - CDS 7516 - 8166 346 ## COG0693 Putative intracellular protease/amidase 9 5 Tu 1 . + CDS 8370 - 9437 1360 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 9456 - 9502 10.1 + Prom 9973 - 10032 2.5 10 6 Tu 1 . + CDS 10086 - 11357 1192 ## COG0814 Amino acid permeases 11 7 Op 1 1/0.455 - CDS 11354 - 11710 323 ## COG3189 Uncharacterized conserved protein 12 7 Op 2 4/0.182 - CDS 11721 - 12224 708 ## COG0691 tmRNA-binding protein 13 7 Op 3 28/0.000 - CDS 12279 - 13181 955 ## COG2177 Cell division protein 14 7 Op 4 4/0.182 - CDS 13182 - 13871 326 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 15 7 Op 5 . - CDS 13905 - 15011 1466 ## COG1186 Protein chain release factor B - Prom 15034 - 15093 2.0 16 8 Op 1 1/0.455 + CDS 15081 - 15908 842 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 17 8 Op 2 . + CDS 15901 - 16674 902 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 16763 - 16808 14.6 - Term 16751 - 16796 14.6 18 9 Op 1 . - CDS 16815 - 18005 1266 ## cauri_0728 putative secreted protein 19 9 Op 2 . - CDS 18021 - 18155 61 ## 20 10 Tu 1 . + CDS 18195 - 18614 343 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 21 11 Op 1 8/0.000 - CDS 18716 - 19129 287 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 22 11 Op 2 . - CDS 19219 - 20265 991 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 20286 - 20345 3.2 23 12 Op 1 8/0.000 + CDS 20392 - 21495 1207 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 24 12 Op 2 . + CDS 21495 - 22538 1056 ## COG4779 ABC-type enterobactin transport system, permease component 25 12 Op 3 14/0.000 + CDS 22545 - 23456 1300 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 26 12 Op 4 . + CDS 23456 - 24238 229 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 24251 - 24297 3.4 + Prom 24278 - 24337 2.3 27 13 Tu 1 . + CDS 24435 - 25091 592 ## cauri_0720 putative secreted protein + Prom 25102 - 25161 2.3 28 14 Tu 1 . + CDS 25193 - 26371 937 ## cauri_0719 putative secreted protein + Term 26563 - 26600 1.7 - Term 26097 - 26143 2.6 29 15 Tu 1 . - CDS 26368 - 26754 350 ## cauri_0718 putative secreted protein - Prom 26868 - 26927 3.8 30 16 Tu 1 . - CDS 27118 - 29214 678 ## COG2375 Siderophore-interacting protein - Term 29620 - 29667 0.2 31 17 Tu 1 . - CDS 29687 - 30694 1241 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 30912 - 30971 2.8 32 18 Tu 1 . + CDS 31007 - 31315 254 ## cauri_0715 hypothetical protein - Term 31232 - 31272 -0.8 33 19 Tu 1 . - CDS 31323 - 32528 1125 ## COG2311 Predicted membrane protein + Prom 32493 - 32552 2.6 34 20 Tu 1 . + CDS 32588 - 33037 498 ## COG4762 Uncharacterized protein conserved in bacteria + Term 33172 - 33199 -0.8 35 21 Tu 1 . - CDS 33052 - 34014 786 ## cauri_0712 hypothetical protein - Prom 34049 - 34108 1.6 + Prom 34171 - 34230 1.6 36 22 Tu 1 . + CDS 34268 - 36094 1779 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain + Term 36129 - 36171 7.6 - Term 35954 - 36003 0.9 37 23 Tu 1 . - CDS 36214 - 37044 238 ## COG1712 Predicted dinucleotide-utilizing enzyme - Prom 37076 - 37135 4.3 - TRNA 37161 - 37237 86.6 # Met CAT 0 0 - Term 37297 - 37352 10.3 38 24 Tu 1 . - CDS 37395 - 40421 4121 ## COG1615 Uncharacterized conserved protein - Prom 40451 - 40510 4.3 39 25 Op 1 . + CDS 40500 - 41090 588 ## cauri_0708 hypothetical protein 40 25 Op 2 . + CDS 41111 - 41848 780 ## cauri_0707 beta-N-acetylhexosaminidase (EC:3.2.1.52) 41 26 Tu 1 . - CDS 41853 - 42929 326 ## PROTEIN SUPPORTED gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 - Prom 43062 - 43121 1.6 42 27 Tu 1 . + CDS 43023 - 44450 1652 ## COG5282 Uncharacterized conserved protein + Term 44630 - 44674 8.3 - Term 44360 - 44391 3.2 43 28 Tu 1 . - CDS 44447 - 44944 390 ## COG1451 Predicted metal-dependent hydrolase + Prom 44919 - 44978 3.4 44 29 Tu 1 . + CDS 45019 - 45849 451 ## cauri_0703 hypothetical protein 45 30 Op 1 1/0.455 - CDS 45856 - 47907 1965 ## COG0210 Superfamily I DNA and RNA helicases 46 30 Op 2 2/0.182 - CDS 47879 - 48613 468 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 47 30 Op 3 4/0.182 - CDS 48613 - 49725 1074 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 48 30 Op 4 5/0.091 - CDS 49768 - 52980 2957 ## COG0210 Superfamily I DNA and RNA helicases 49 30 Op 5 . - CDS 52973 - 56149 2241 ## COG0210 Superfamily I DNA and RNA helicases 50 30 Op 6 . - CDS 56153 - 56926 568 ## cauri_0697 hypothetical protein 51 30 Op 7 . - CDS 56956 - 57891 769 ## cauri_0696 hypothetical protein 52 30 Op 8 . - CDS 57930 - 58151 379 ## cauri_0695 hypothetical protein - Prom 58218 - 58277 2.7 + Prom 58119 - 58178 3.4 53 31 Op 1 . + CDS 58254 - 59642 1007 ## COG0513 Superfamily II DNA and RNA helicases 54 31 Op 2 . + CDS 59639 - 60925 1077 ## cauri_0693 putative secreted protein 55 32 Tu 1 . - CDS 60954 - 61412 555 ## cauri_0692 hypothetical protein - Prom 61631 - 61690 6.6 56 33 Tu 1 . + CDS 61462 - 61677 113 ## gi|262183613|ref|ZP_06043034.1| hypothetical protein CaurA7_06446 + Term 61900 - 61958 2.5 + Prom 61698 - 61757 3.2 57 34 Op 1 . + CDS 61991 - 62248 421 ## cauri_0691 WhiB transcriptional regulator + Prom 62254 - 62313 1.7 58 34 Op 2 . + CDS 62345 - 62419 75 ## + Term 62436 - 62488 13.2 59 35 Op 1 . - CDS 62537 - 62809 226 ## gi|262183615|ref|ZP_06043036.1| hypothetical protein CaurA7_06456 60 35 Op 2 . - CDS 62809 - 63423 687 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 61 36 Tu 1 . + CDS 63452 - 63955 581 ## COG2606 Uncharacterized conserved protein - Term 63886 - 63915 0.3 62 37 Tu 1 . - CDS 63966 - 64628 728 ## COG2135 Uncharacterized conserved protein 63 38 Tu 1 . + CDS 64627 - 65931 1134 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 64 39 Tu 1 . + CDS 66034 - 66945 670 ## COG1162 Predicted GTPases + Term 67152 - 67189 -0.3 65 40 Op 1 . - CDS 67016 - 67621 573 ## cauri_0684 hypothetical protein 66 40 Op 2 . - CDS 67675 - 67980 290 ## cauri_0683 hypothetical protein 67 40 Op 3 . - CDS 68066 - 68584 556 ## cauri_0682 hypothetical protein 68 40 Op 4 . - CDS 68585 - 68995 540 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 69029 - 69088 3.6 69 41 Tu 1 . + CDS 69217 - 69621 186 ## gi|227502895|ref|ZP_03932944.1| hypothetical protein HMPREF0276_1498 - Term 69412 - 69455 2.6 70 42 Tu 1 . - CDS 69690 - 70049 344 ## cauri_0680 putative secreted protein - Prom 70083 - 70142 4.5 - Term 70107 - 70148 10.1 71 43 Op 1 7/0.000 - CDS 70183 - 72735 3743 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 72890 - 72949 2.3 - Term 72915 - 72971 11.2 72 43 Op 2 . - CDS 73008 - 73652 403 ## PROTEIN SUPPORTED gi|229222868|ref|ZP_04347579.1| SSU ribosomal protein S30P - Prom 73750 - 73809 2.1 73 44 Tu 1 . - CDS 73823 - 74272 265 ## cauri_0677 hypothetical protein - Term 74445 - 74475 -1.0 74 45 Op 1 . - CDS 74525 - 76234 1347 ## cauri_0676 lipoprotein LpqB 75 45 Op 2 40/0.000 - CDS 76231 - 77880 1660 ## COG0642 Signal transduction histidine kinase 76 45 Op 3 4/0.182 - CDS 77974 - 78660 839 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 77 45 Op 4 . - CDS 78662 - 79282 728 ## COG0125 Thymidylate kinase 78 45 Op 5 . - CDS 79327 - 79680 522 ## cauri_0672 hypothetical protein 79 45 Op 6 . - CDS 79664 - 79798 86 ## 80 46 Tu 1 . + CDS 80050 - 81000 463 ## cauri_0671 DNA-directed RNA polymerase II subunit (EC:2.7.7.6) + Term 81008 - 81059 10.5 81 47 Op 1 . - CDS 81078 - 82307 1460 ## COG1482 Phosphomannose isomerase 82 47 Op 2 . - CDS 82317 - 83282 819 ## cauri_0669 hypothetical protein 83 48 Tu 1 . + CDS 83300 - 84028 765 ## COG0007 Uroporphyrinogen-III methylase - Term 83824 - 83853 -0.9 84 49 Op 1 1/0.455 - CDS 84038 - 85033 864 ## COG0730 Predicted permeases 85 49 Op 2 . - CDS 85026 - 85718 581 ## COG2138 Uncharacterized conserved protein 86 50 Tu 1 . - CDS 85981 - 87651 1866 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) - Prom 87673 - 87732 3.6 + Prom 87712 - 87771 4.5 87 51 Op 1 . + CDS 87881 - 88423 784 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 88 51 Op 2 . + CDS 88543 - 89232 974 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 89317 - 89390 12.6 89 52 Op 1 . - CDS 89430 - 90797 1726 ## COG1109 Phosphomannomutase 90 52 Op 2 . - CDS 90865 - 91308 444 ## cauri_0662 hypothetical protein + Prom 91280 - 91339 1.9 91 53 Tu 1 . + CDS 91402 - 91872 373 ## cauri_0661 hypothetical protein - Term 91863 - 91929 18.4 92 54 Tu 1 . - CDS 91956 - 92258 354 ## cauri_0660 WhiB transcriptional regulator - Prom 92361 - 92420 3.0 - Term 92658 - 92709 10.3 93 55 Op 1 3/0.182 - CDS 92739 - 93833 1313 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 94 55 Op 2 . - CDS 93890 - 94801 508 ## COG1216 Predicted glycosyltransferases + Prom 94707 - 94766 2.9 95 56 Op 1 . + CDS 94855 - 96507 1844 ## COG1316 Transcriptional regulator 96 56 Op 2 . + CDS 96600 - 97310 831 ## cauri_0656 hypothetical protein 97 56 Op 3 . + CDS 97335 - 98057 861 ## COG0730 Predicted permeases 98 57 Tu 1 . - CDS 98146 - 99147 400 ## cauri_0654 hypothetical protein 99 58 Tu 1 . - CDS 99259 - 100140 417 ## COG0583 Transcriptional regulator - Prom 100220 - 100279 1.7 + Prom 100163 - 100222 1.5 100 59 Op 1 . + CDS 100270 - 101916 2101 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 101 59 Op 2 . + CDS 101929 - 103266 1625 ## COG0814 Amino acid permeases 102 59 Op 3 . + CDS 103280 - 104320 1200 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase + Prom 104373 - 104432 3.9 103 60 Op 1 . + CDS 104469 - 105845 1831 ## COG1012 NAD-dependent aldehyde dehydrogenases 104 60 Op 2 . + CDS 105855 - 106628 827 ## COG4922 Uncharacterized protein conserved in bacteria + Term 106670 - 106718 19.1 105 61 Op 1 . - CDS 106840 - 108069 1406 ## COG0814 Amino acid permeases - Term 108092 - 108131 9.8 106 61 Op 2 . - CDS 108143 - 109471 1951 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 109549 - 109608 1.9 + Prom 109504 - 109563 2.5 107 62 Tu 1 . + CDS 109589 - 111034 1184 ## COG2508 Regulator of polyketide synthase expression 108 63 Tu 1 . - CDS 111050 - 112576 1141 ## COG2508 Regulator of polyketide synthase expression - Prom 112621 - 112680 4.9 + Prom 112592 - 112651 2.5 109 64 Op 1 . + CDS 112688 - 114013 1762 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 110 64 Op 2 3/0.182 + CDS 114050 - 115498 2365 ## COG2072 Predicted flavoprotein involved in K+ transport 111 64 Op 3 1/0.455 + CDS 115512 - 116492 1247 ## COG0657 Esterase/lipase + Term 116514 - 116558 5.9 112 65 Tu 1 . + CDS 116591 - 117901 1931 ## COG3949 Uncharacterized membrane protein - Term 117877 - 117916 -0.3 113 66 Tu 1 . - CDS 117966 - 119333 855 ## cauri_0639 hypothetical protein - Prom 119451 - 119510 2.4 + Prom 119397 - 119456 3.0 114 67 Op 1 10/0.000 + CDS 119624 - 121681 2824 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit 115 67 Op 2 . + CDS 121719 - 123734 2458 ## COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit 116 67 Op 3 . + CDS 123769 - 125487 1551 ## cauri_0636 Nif-specific regulatory protein 117 67 Op 4 . + CDS 125606 - 126724 1519 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 126765 - 126813 11.0 + Prom 126733 - 126792 2.2 118 68 Tu 1 . + CDS 126826 - 128340 1725 ## cauri_0634 hypothetical protein 119 69 Tu 1 . - CDS 128337 - 129518 1177 ## COG1960 Acyl-CoA dehydrogenases - Prom 129571 - 129630 2.2 120 70 Op 1 . + CDS 129606 - 130016 454 ## COG0824 Predicted thioesterase 121 70 Op 2 . + CDS 130092 - 131063 1137 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 122 70 Op 3 . + CDS 131067 - 131879 888 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 132032 - 132092 24.0 123 71 Op 1 . + CDS 132102 - 132482 445 ## COG2315 Uncharacterized protein conserved in bacteria 124 71 Op 2 . + CDS 132538 - 132984 437 ## cauri_0628 hypothetical protein 125 72 Op 1 . - CDS 133006 - 134241 1345 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 126 72 Op 2 . - CDS 134251 - 135843 1605 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 127 73 Tu 1 . + CDS 135985 - 137124 635 ## cauri_0625 hypothetical protein 128 74 Tu 1 . + CDS 137263 - 138615 1275 ## COG0477 Permeases of the major facilitator superfamily 129 75 Tu 1 . + CDS 138716 - 139048 262 ## COG1230 Co/Zn/Cd efflux system component + Prom 139265 - 139324 4.7 130 76 Tu 1 . + CDS 139459 - 140841 2217 ## cauri_0622 putative secreted protein + Term 140915 - 140951 8.6 131 77 Op 1 . + CDS 141027 - 142184 774 ## COG0627 Predicted esterase 132 77 Op 2 . + CDS 142260 - 142731 543 ## COG2610 H+/gluconate symporter and related permeases Predicted protein(s) >gi|227860863|gb|ACLH01000057.1| GENE 1 169 - 924 248 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 223 1 226 245 100 28 5e-20 MIKLSNVSKSYSGETNIGPIDLEIPSGGITALIGPNGAGKSTMLTMIGRLLDVDEGTIEV AGYDVSSTKSQDLAKILSILRQENHFITKLTVRQLVSFGRFPYSKGRLSAEDEEIVSRYI DFFHLRELENRYLDELSGGQRQRAYVAMVLCQETDYVLLDEPLNNLDISHSVEMMKHLRK AAKEFGRTIIIVLHDINFAARYADHICAAKDGSIVSFGSPEEIMRDEILTPIFETPITVI DGPDGLLACYH >gi|227860863|gb|ACLH01000057.1| GENE 2 921 - 1913 949 330 aa, chain - ## HITS:1 COG:Cgl0789 KEGG:ns NR:ns ## COG: Cgl0789 COG4605 # Protein_GI_number: 19552039 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Corynebacterium glutamicum # 2 330 43 371 371 370 67.0 1e-102 MGSFQSAAAARKYWIILVALIVAGLVFAFGLLAYDNPMDFGTRKWWLIARRRADAVTAMA IVAVCQSVATVAFHTVTNNRILTPSIVGFESLYVAINTATIFFLGATGLTQARNMGTFLV QLVLMVGLSLVLYSWLLTSRRNNMHAMLLVGIIIGGGLGSLSTFMQRMLTPSEFDVLTAR LFGSVNNAESEYYPIAIPMVLAVTLLMYLNSRQLNVLALGRDAATNLGVNHKVNAIYTLI LVSILMATSTALVGPMTFLGFLVATLAYQAAETYDHRFLFPMAVATAFAVLTGAYFLMQH VFYAQGVVSIIIELVGGSVFLLVILRKGKL >gi|227860863|gb|ACLH01000057.1| GENE 3 1976 - 2977 856 333 aa, chain - ## HITS:1 COG:Cgl0788 KEGG:ns NR:ns ## COG: Cgl0788 COG4606 # Protein_GI_number: 19552038 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Corynebacterium glutamicum # 1 330 1 328 333 370 69.0 1e-102 MTVKSSAPAEHSAISRRNSRGPVLTWKLGLGVLAVIALLLLSLMVGEYSILNNEDGWEMF FTTRIPRTVALVLAGAAMAMSGLVMQLLTQNRFVEPTTTGTTEWAGLGLLFSLILFPHSS VLVKMVISVVFAFVGTMVFFAFLRRVALRSSLIVPIIGIMLGAVVSAVSSYVALATDTLQ QLGIWFMGSFTSVYEGQYEVLWIVLLVLLAVYFYADKLTVAGLGEDIATNIGLNYQRMIL LGTGLIAVATGVVTVVVGSLPFLGLIVPNVVSMLRGDDLRSNLPWVCLLGIATVTLCDLI GRTIISPFEMPVSVILGVVGAIVFVVLIVRSTK >gi|227860863|gb|ACLH01000057.1| GENE 4 3013 - 4044 1513 343 aa, chain - ## HITS:1 COG:Cgl0787 KEGG:ns NR:ns ## COG: Cgl0787 COG4607 # Protein_GI_number: 19552037 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 11 341 3 336 338 323 56.0 2e-88 MFTLTRRASRKTAAKVAATLSVAALALTGCSSSQSEETAEPTESAAAGASTITLDDNFGS KEITLPVENPAVTDNRAFSILAQWDIDLAAAPLNLVPKSLRDTYNEDTVQVNLGSHKDPD LESLVAADPDLVWNGQRFEQYQEDIEKLLEDVPVVDFEPRDDEDFFDELKRHTEALGQVF GHEEDAAKLIEDFDAAAERAKKAYNPEQKVMAVNTSGGEIGYIAPGIGRVYGPVFELLGL TPALEVSNASDDHEGDDISVEAIAESNPDWILVMDRDSAISKEGEDVTPGEKLVKDNAAL QNVTAVKEGNVYVAPTDTYIDESIITYTEILNALADAFEKANA >gi|227860863|gb|ACLH01000057.1| GENE 5 4218 - 5573 592 451 aa, chain - ## HITS:1 COG:Cgl0102 KEGG:ns NR:ns ## COG: Cgl0102 COG1473 # Protein_GI_number: 19551352 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 7 446 11 462 462 477 56.0 1e-134 MNQRNNPSTAYLEAMEEGVAKRVASAAPPEKQGEDYPGQAKLWDAAAARAEVLRERAAHI VADLHAHPETAFEEHRSMAVLADIVEGHGFLTRRGVYGVETAFEASWQSADFEPERHPTV AILAEYDALPQIGHACGHNVIAAAGVTGFLAVTAVLDDAPAVSGRILLQGTPAEEGHSGK EYMIRGGSLEGVDAAVMIHGFGYDIGAHAWVGRRILRVRYRGVAAHASSQPFMGRNALDA ASLAYQGIGLMRQQMPPSDRVHAIMSGGDRPSIIPSEAEMTIYVRSLGTRTLMDLSTRVE EIVRGAALMAGVDVDVEWDEHPMTLPVRNNEALVDRWSATQARRGRTALPAGTVPDTVAA STDFGNVSHLVPGLHPMVQVSPTDVALHTEDFARWAATPQAVDAAVDSAAGLAQVTLDFL ADKEFRRAARQDFDREGPVAVSDLLAEKGEG >gi|227860863|gb|ACLH01000057.1| GENE 6 5578 - 7248 2019 556 aa, chain - ## HITS:1 COG:Cgl0101 KEGG:ns NR:ns ## COG: Cgl0101 COG2978 # Protein_GI_number: 19551351 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Corynebacterium glutamicum # 40 555 26 536 538 686 73.0 0 MNSPSNAAPQGGAGTTEKSKANPAKAEQKSSQQSGGGMLDRFLNGVEYIGNKLPEPFTIF LILFLITGVLSTIMAKMGVEIKVPGSDEIQPVKGLFTGEGLTWFTTTMGENYINFPPLVT VLPIMLAVGVAERSGILSALIRKLFGSAKPWLLPYAVGVIGVTASVMADAAFVIVPPLAA MVFKAAGRHPVAGLIGGFAAVGAGYSTALVPTSLDALFAGITTAVMDTLPNTEFAPVNAM SNYYFNVASSIVLGVLAGFIIDKVIEPRMWKQEVPTEEDIDPEDAAERGDRDENGEELTA ELRPAESKGLIWSGVATVILTAIILFAVLLPESPWRNEEGGFLPKSPLLNSIVFIVFAYF LVLGVVYGKVVGTVKGITDVVNMMIGALKDMMSFLILAFILGQFVALFAWTGIGTFTAVK GAAFLESIGLTGFPAIFAFIVLASCLNLLIISGSSMWTLMAAVFVPMFALLGYEPAFIQG AFRVGDSATQIITPLNPYMIVMLGFLQRYERDAGLGTLMSRLVPFVVPFFTAWAILLAIW FYVDLPLGPGNNVMIG >gi|227860863|gb|ACLH01000057.1| GENE 7 7278 - 7448 77 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHVTLLGKGYHGNVTWVTNIFAPRHFLFGQTPSDAASSPAAHLYTPTGSPQLRPR >gi|227860863|gb|ACLH01000057.1| GENE 8 7516 - 8166 346 216 aa, chain - ## HITS:1 COG:CAC2826 KEGG:ns NR:ns ## COG: CAC2826 COG0693 # Protein_GI_number: 15896081 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 7 203 4 201 201 164 43.0 1e-40 MDTEPLRIAVVLFEGFELLDVFGPVQLLQVVSEVTVVFAGPDGEPVASSQGVEVVPTISY ERVEPTDALLVPGGKGTRQLVEDESFLSWLRGVGAQAPWVASVCTGSAVLAAAGLLEGYA ATSNKRAFAWASSFGESVTWKPKARWVQDRNRWTSSGVAAGVDMTVALIAHLTSEVVAID AANFAEYEPHRDSGWDPFARINGLVPSSGGEAERRL >gi|227860863|gb|ACLH01000057.1| GENE 9 8370 - 9437 1360 355 aa, chain + ## HITS:1 COG:Cgl2726 KEGG:ns NR:ns ## COG: Cgl2726 COG2141 # Protein_GI_number: 19553976 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 352 1 345 347 428 62.0 1e-120 MKAFGFLSFGHYAFGGQRGPSAEKVAKIHLEIAQAADEIGVNNASFRVHHFVPQASAPMP LLGAVAATTKNIEVGTGVIDMRYENPLYLAEEAASLYQLSGGRVALGVSRGAPEVAERGW EAFGYKGEAPNGADVARAHLEAFMTAVDGNGFATAAPLDRQYPNMFQPGSALPVFPMAPE LRKHIFYGSGTHASAEQTAKDGLNLMSSTLVSETTAETLGEIQADQINRYRAAWKEAGHD WAPRVSVSRSIFPIVDGADMQRFGMQASGSDQVGVLPDAGASTFGRTYAAEPDKLIEQLK ADPAVMSADTLLITIPTGMGVDVNVKILENFATHVAPALGWQPNTEGPVTGYPID >gi|227860863|gb|ACLH01000057.1| GENE 10 10086 - 11357 1192 423 aa, chain + ## HITS:1 COG:PM0037 KEGG:ns NR:ns ## COG: PM0037 COG0814 # Protein_GI_number: 15601902 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Pasteurella multocida # 23 422 16 413 413 358 49.0 9e-99 MSTNTETTSSTQDAKRPASNTEWAISLFGTAVGAGILFLPINAGSFGFWPLLVATILIGP MTYFSHRGLARMICASPRQGEDITAVVTDYFGKSAGFIISVVYFCAIFPIVLIYGVSITN TVDSFIVNQLHGPSVPRPLLSFLLVGIMTIVFAFGQRMVLAVTQFLVYPLIFCLGALSIY LIPRWDIASFMEVGNNDWRVVGAVALIIPVLVFSFNHSPAISQFSLAMVAAHGREKSSEN ASRALALTAILLTVFTMFFVWSCTLTLGADGLSEAREQNLPVLSYLANVTGVPVLAFLSP IIAMIAIISSYFGHVLGATEGGNFLLRNAAPRATAKLSEKQLNSIMHGIIFVAAWVVAII DPSILGLIEAIGGPFIASILYLLPMYAINRIDALKQFRGRPSNVFVVITGLIAVGATVWS LFS >gi|227860863|gb|ACLH01000057.1| GENE 11 11354 - 11710 323 118 aa, chain - ## HITS:1 COG:Cgl0782 KEGG:ns NR:ns ## COG: Cgl0782 COG3189 # Protein_GI_number: 19552032 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 117 3 117 117 108 49.0 2e-24 MIYTVKVHDIIRGDEEPRGVAVLVDKLWPRGVAKERLHYEHWFKDVAPSPELRKWWGHDA DTFEEFARRYRAELDENDGKELEQLRQLAVAGDVTLLFAAKDREVNHATVLKAWLEER >gi|227860863|gb|ACLH01000057.1| GENE 12 11721 - 12224 708 167 aa, chain - ## HITS:1 COG:Cgl0781 KEGG:ns NR:ns ## COG: Cgl0781 COG0691 # Protein_GI_number: 19552031 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Corynebacterium glutamicum # 5 167 2 164 164 233 73.0 1e-61 MAKKAKKKKAAVDNNSTLATNRRARHDYTILDTLECGMVLVGTEIKSMREGKISLADAFA TIDDGEVYIRNLHIPEYSQGSWTNHSPKRTRKLLLHRREIDKLMGQVRDGNKTLIPLKVY LKDGRAKCELGLAKGKQDYDKREAIKRRDQDRDITRELGRRVKGINA >gi|227860863|gb|ACLH01000057.1| GENE 13 12279 - 13181 955 300 aa, chain - ## HITS:1 COG:Cgl0780 KEGG:ns NR:ns ## COG: Cgl0780 COG2177 # Protein_GI_number: 19552030 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Corynebacterium glutamicum # 1 299 1 299 300 332 57.0 7e-91 MNLGFVFREAFKGLGRNITMTIAMVITTAISVALVVAGVLVTQMTNDTKDIYLERVEVMV QLNEDISANDPQCKDAACAGLKKKLEADEDIESVSYRNREDSYERFVELFKETDPVMVEE TSPDALPAAFHVRLKDPTDTAPIDAIASDPAVSDIIDQQEEVRSAAGNLDAIRNATFVLA AVMALAAIMLIANMVQIAAYQRQRETAIMRIVGASRWVTHAPFIMEAVLGAVGGVVLAGV GVIVGKSTVIDPALKDLYHNQLLAPVTSGDVWTALPIVGLVAILCAALTAQVTMRAYVRT >gi|227860863|gb|ACLH01000057.1| GENE 14 13182 - 13871 326 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 4 217 223 130 36 5e-29 MITFENVSKVYPTSTRPALDNVSFEIEDGEFVFLIGPSGSGKSTFLQLMVRETNVSSGDI YFGDFHVNALKGREVNRLRQSIGYVFQDFRLLPKLNVYDNVAFALEVIGKRKARIAKQVP EVLDMVGLGAKQHRMPHELSGGEQQRVAIARAFVNRPKLLLADEPTGNLDPSTAAEIMAL LTKINRHGTTVVMSTHNARAVNEARQRVIELHNGTLVRDEKNAMYGEAV >gi|227860863|gb|ACLH01000057.1| GENE 15 13905 - 15011 1466 368 aa, chain - ## HITS:1 COG:Cgl0778 KEGG:ns NR:ns ## COG: Cgl0778 COG1186 # Protein_GI_number: 19552028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Corynebacterium glutamicum # 1 368 1 366 368 574 83.0 1e-164 MRPEQTARLEELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSA QQAKLRKLNSLRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGE YDEREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFV VHGEYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVD VYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQE ERAELDALGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIR WRMAQQEA >gi|227860863|gb|ACLH01000057.1| GENE 16 15081 - 15908 842 275 aa, chain + ## HITS:1 COG:Cgl0777 KEGG:ns NR:ns ## COG: Cgl0777 COG0483 # Protein_GI_number: 19552027 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 6 273 15 287 291 345 65.0 8e-95 MSDQPSLTEMIDAIIKTFIVAHADDTDAHLAQALVYNAGRLAWRLREQGVDIEQKTSVSD VVTDADFAAERFVAGVLEALRGEDGIVGEEGANRQSKSGRTWVIDPVDGTYNFASGSDYW CSALALVDADGVVLGAVHRPAMGYTWFGGRDHTTSLDGKDVAKLSDAPADKLCLSTYLHP TSMTDPNIAAAWEKVAPHFATVRMLGAGSVDLSCVADGTWGAWMQHSVKDWDWYPGQALV LAAGGAARKVEAGGVEWCIAGNKQVVDQMEEWLRG >gi|227860863|gb|ACLH01000057.1| GENE 17 15901 - 16674 902 257 aa, chain + ## HITS:1 COG:Cgl0776 KEGG:ns NR:ns ## COG: Cgl0776 COG0483 # Protein_GI_number: 19552026 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 1 256 1 259 260 320 66.0 2e-87 MGKYKEDLGLALEMAGHADAVTMHRFEAADLSVKDKPDMTPVSDADLACEKAIRDALKRS RPRDEVLGEEFGGEACYEGRQWVIDPIDGTKNFVRGVPVWATLIALLEDGEPVVSVISAP ALRRRWYAAKGGGAYRVFGGEPKRLRVSEVSNLEDASLAMSSLAGWGLHRDTFISLTDKV WRLRGYGDFWNYCLVAEGAVDIAAEPEVSLWDLAAPALLVTEAGGRFTNVRGEDGPHGGS ALVTNGTLHKAALSALS >gi|227860863|gb|ACLH01000057.1| GENE 18 16815 - 18005 1266 396 aa, chain - ## HITS:1 COG:no KEGG:cauri_0728 NR:ns ## KEGG: cauri_0728 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 396 1 396 396 707 100.0 0 MRKIPHLKKVLVGSAFAGAFFLGNPAAGAQELPTIPELDSAGIVDQVRADLASVGIETKP VDAELTDAIDTAVNGAAAQAAQDASAAAASAQNFPVAREVVDQAQLPVFPDAPAYTGADA ITGDPLTNPEPIGLLQEATQPEFVPKGTDPNYVWKNDSFSKLAAGKPQADYVLHRVPGSF YDAPQIPEESNTAMTEGKSLYGPGTPLYISEDTMCTLTAAGTDAQGRKVGITAGHCGNVG DPVSSADSWQVGPTGTLVTKNTYLDYSVIEFGSKAEVTRSYNGVTAYGVGGAAQPGEVAC KRGVATGTTCGMTFQHGKEISVNQVCAMVGDSGAPVFRDGRIVGSVSRGLFPGLPSCRTP WQGALHNPTVVSNTDAIVADLNRRGEVGSGFTLPEN >gi|227860863|gb|ACLH01000057.1| GENE 19 18021 - 18155 61 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEKRGHPKAVSNVTGWTQSHAVETHATVGVPSWVGLIDQYEKK >gi|227860863|gb|ACLH01000057.1| GENE 20 18195 - 18614 343 139 aa, chain + ## HITS:1 COG:CC1346 KEGG:ns NR:ns ## COG: CC1346 COG0494 # Protein_GI_number: 16125595 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Caulobacter vibrioides # 14 139 4 127 131 62 36.0 3e-10 MSENPTSPSSAADISEIVAIVLRDTHGRVLVIRATSTPEFVLPFGSIDSTLNPARAAQLI AHEAIRAVVDTSKLRRLATYISPAANDAPQTIHAHVYVYEEEISVAHPDKEIAELAWVDP AAPDVEIAPLLKERVFPAL >gi|227860863|gb|ACLH01000057.1| GENE 21 18716 - 19129 287 137 aa, chain - ## HITS:1 COG:Cgl1228 KEGG:ns NR:ns ## COG: Cgl1228 COG0614 # Protein_GI_number: 19552478 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 13 121 16 173 338 103 42.0 7e-23 MNSCPASVRVFGVVAVLALGLAACSSSAASASNSDNAAFPATISTKFGGVTIDEAPRRVV ALGWGDAELALSLGVQPDLLLILDVRSSGDRERYDTLSAIAPVVGIPEGADNWLTDRSTQ LEWWGRQQKACHQCCRR >gi|227860863|gb|ACLH01000057.1| GENE 22 19219 - 20265 991 348 aa, chain - ## HITS:1 COG:Cgl1228 KEGG:ns NR:ns ## COG: Cgl1228 COG0614 # Protein_GI_number: 19552478 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 51 344 41 334 338 270 52.0 4e-72 MPLRTSRTRRSAAVFLSLALVGWGAAACSSDPDSGAADNSVAASSASLAQSASADGDAAA YPVTVATKFGDVTVEEAPRRVVALGWGDAEVALSLGVEPIAAADWLSFGGDGVGPWVEHG YTQSPEILGTTDVNYEAVAALEPDLILDVRSSGDQERYDMLSAIAPVIGVSAGGDKYKTS RDEQLTMIGAALGKPAEAQEQIEQLQERISGIAADHPEWSGTTFAVLGRTATTWGAYNDG TNRADRLIELGFSLNPWVKSQSASAKNIPLSGETLSNADSEVVIAQAVSTDISTVETDPA WMGLPAVREGRAIVMPKELSQAFSLATAESTNYALDERVPLLEDIVPV >gi|227860863|gb|ACLH01000057.1| GENE 23 20392 - 21495 1207 367 aa, chain + ## HITS:1 COG:Cgl0493 KEGG:ns NR:ns ## COG: Cgl0493 COG0609 # Protein_GI_number: 19551743 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 21 367 21 348 348 223 45.0 4e-58 MTSTTLPTPAAGTPRAAGHSRRLLGLALLVAALAALVFASLALGAKATSISELTQAWPTA WEILRGHTDTAQAAGTVGSSVAEIAGILATMRIPRTVLAIVIGAALGLAGTLVQGLTRNP LADPGLLGVNAGAALFVAAGIFLFGLTSMQSHLFLAFLGAGLAALLVFGLSAGGIGRGDT LGLVLAGSALSAVLAAATSAIVYIDPNALDTLRFWQAGSVTGRGFDIITPALVPLAIGAV LALALGPTLNILNLGTEAAQALGTNVARANILGLVAITLLAGAATAAAGPIGFIGLVVPH VARGITGPDYKWVTPYSALAGACLLLGADIVGRLIMRPGELQAGIVIALLGGPAFIWLVR HRTVVSL >gi|227860863|gb|ACLH01000057.1| GENE 24 21495 - 22538 1056 347 aa, chain + ## HITS:1 COG:AGpA451 KEGG:ns NR:ns ## COG: AGpA451 COG4779 # Protein_GI_number: 16119542 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 344 38 367 368 180 36.0 3e-45 MKYLSLGKFSFLYHPRTQAWTAAIVVASALVWVISLGIGEFPLNPAEVIGVLAGGGNKLE RTVVIDWRLARSLVGLAVGAALGLSGAITQRIARNGLASPDILGINQGATVAAVAIMVFG GSAGAGGAFGAYVGIPLAAMAGGLATGAAIWMLSRRGRVDMFRLVLVGIGGNAFLHALVT YMLAATDLNTAAAAKVWMVGSLNGCTFEHLWPTLGMLVVCGLVLARIAIDLPALELGEDS AQALGAPLKKINAALLIVSVLLAAVTVSAVGPVGFVAFVAPQISARLARVGAPPLGTSAA MGAIIVCVSDLIARCAFGWEIPVGIITSVIGGPFLIWLLWQQTRTRK >gi|227860863|gb|ACLH01000057.1| GENE 25 22545 - 23456 1300 303 aa, chain + ## HITS:1 COG:Cgl1988 KEGG:ns NR:ns ## COG: Cgl1988 COG0614 # Protein_GI_number: 19553238 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 47 302 54 310 312 315 63.0 9e-86 MQRRNFLKITAGLGVAAFAAACSKQETAPSEQAATSAASSSAAEQHQRVIALNTGQLDNL LMLRILPVGAAKAKNLGVVPDYIRNRFGSDFDLDSIADCGLRANPDLETIASLKPTLICA NSRTDEAILEQLKAIAPVVTGKGGGENWNQDLLTIAEAVGKKDSAETLLAEYESNAKAWG EGLSSKPTVSFLRSKDDQFQLYGVNSMAGSVAADAGLPRPANQKQIEKAGQDISAEQLSE ADADWIFYGVNAGAADPSQAATWRSLKAVQANQAVSVDYESWYMNASLLSATIILQGLKD SIK >gi|227860863|gb|ACLH01000057.1| GENE 26 23456 - 24238 229 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 5 231 279 510 563 92 29 8e-18 MNARLSAHSVSVGYGDTVISRDVTLDIPDGQVTTLIGANGCGKSTLLRGLSHLLPLSAGS VTLDGKKLGDYSSRELATRLSMLPQSPITPAGVTVADLVARGRHPHQSWLQQWSASHSAA VDEAMALTNVFQLRDRPVDSLSGGQRQRVWIAMVLAQDTDIVFLDEPTTYLDLAHSIDVL ELVSTLNKEQGKTIVMVLHDLNLAARYSDNLVLMKDGSVTALGSPESTITPQALRDVFGL DSRVIEDPVTGGPLIVPERP >gi|227860863|gb|ACLH01000057.1| GENE 27 24435 - 25091 592 218 aa, chain + ## HITS:1 COG:no KEGG:cauri_0720 NR:ns ## KEGG: cauri_0720 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 218 3 220 220 260 100.0 2e-68 MKNLRALLSLSLLLPLAACSAGEEDSAAPSAVTTTVVHSANAPAGDDAADDVASGAAPGA SGTAPAPASSTIPPLPEGACATSQLSAEIANEQGAAGSLLVDIVLTNTSGEECTLTGFPG VSAVTGNDGTQLGPAALRETSTEAATVTLAPGAQARAGLKITNVGLLDAAACQPQDADGL RIYPPENTDSLYVAVPGLQGCAGEVDILSVQPITELSP >gi|227860863|gb|ACLH01000057.1| GENE 28 25193 - 26371 937 392 aa, chain + ## HITS:1 COG:no KEGG:cauri_0719 NR:ns ## KEGG: cauri_0719 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 392 1 392 392 642 100.0 0 MTTLPALLPQRTARAAVAAASAAALVASCSLPDTRREAAPSESAVAPDSSTATESASNPT ATSSTSSRATRSRTSPATSSRAASTRNWPVSLAEESCDSNAGVADTGAGEFVGKGEAPTA IVHFLSTEEPERGAPLKDFKVTQDSFDSCEPLSYIIASGNYEGEQVVFPIVFNWGHPLND SNGYFSGDGFDFTIGSDSVSFTTGDTPAHEAGKPVSVTFTAMDFGALKTELNAEDKHHIG IDLTQLSDAVDPADLDEFYEFDTNSGPVRCRFSISESECGFIDGDFSPAEAMNGPSNYFL KTHGETEVDLATFRDDSKDFLSDKKFEKVGDGTYEAGTLGHPIQAELKDGTLTLYFPDGA YVFEDGVLDFFNEDDLEAGTMRSAATSSARAD >gi|227860863|gb|ACLH01000057.1| GENE 29 26368 - 26754 350 128 aa, chain - ## HITS:1 COG:no KEGG:cauri_0718 NR:ns ## KEGG: cauri_0718 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 128 1 128 128 220 100.0 2e-56 MFRNNSLTRRAAMKTAAVLAASTLVLSGCSRGEDSSASNIEGNGNERIAAVGLGDSDTLL ALGIQPVWQQHAHRENVVINSGARFQDQGGIHKGEHAVVAAGTVVTKDVALRTIAGGVLA RYLRDIEG >gi|227860863|gb|ACLH01000057.1| GENE 30 27118 - 29214 678 698 aa, chain - ## HITS:1 COG:RSp0257 KEGG:ns NR:ns ## COG: RSp0257 COG2375 # Protein_GI_number: 17548478 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Ralstonia solanacearum # 16 268 23 262 277 102 32.0 2e-21 MARNSRDREIYPITIRELQVDDIEDITPGMRRITLTGEQLRAHSAFGVDAPPLVSDGFDD DIRIIFPDPATGERPHPITREDATVLWQEEVKDLFRTYTVRSFDASQGRLVVDFARHGQG LAEDWSARARPGDPLYIAGPKSCAALPTHTPWLLMVGDETALPAIARCIESLPAGYRAMA IIEVATRAHVQRLEFEAQVDIHWQVRDEGGDFVAKVTELYGEHPEWAAEPAAMPYVWAAG EAGRLKVIRRWVRALGIPRENVEITGYWRAMAPVQSEAGATATQAESAGQVTGTPSQGDS EGAETEAVTSHRNALVELHELTEMGSAILVRQAVGLGIFGLIDEGADRVDQLAEATGLQQ ELALRIARYLEAVGLVTLSADVALDSSAEDVADQRAVRIGLTTLGSELANPDSPVRDWIT GPAAAKTAALGQLGQALQNPADTGEHRWDYIVQTQPQLAVEEHEQAASSAQWSAPAAAEI LSTKLLARQDAGSLRCAVGGPAAAVYADEILRKIPQANAVVLGSFSEAEDDARISVGPTT AAMTEPEASAEEVMLRDIAPRRRDRARYSALHAPMVGRSGGDARRADWAGTVATLCEQVD AVVLVDPWRRWPAIELQQLVAAVLRSGAQLFLVTPVLQESGAEDHDYQEDLSRLVLYGSQ LPTARVIAKHLAAVGAVVRSKQPVGWSAQLFEVGRGGR >gi|227860863|gb|ACLH01000057.1| GENE 31 29687 - 30694 1241 335 aa, chain - ## HITS:1 COG:AGpA447 KEGG:ns NR:ns ## COG: AGpA447 COG0614 # Protein_GI_number: 16119539 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 53 308 35 292 326 89 28.0 9e-18 MKNSIVVRALSLAVLSTTLMLGACSSDTDGKAENTSSGANSAANSGDNASEVTIKHARGE DTYPVNPERVVAIGPAIDNLLAMGIKPSAVVVSAKDMNAPWRDGKLDGVEIIKQTDFKTL PKEEIAAAAPDFIVGDYWTISEDNYTQLSEIAPTLGGIGTEGEGIGWKSQLKELGKIFNK EDKAQEVIDQDEKVFTDAKSELPNIEGKTGVVSQFAQGSFGAVADPKDPGASFIYDLGMK FPEPLTDGSIEVKQGRVTLSPENVSALAADFMVIYNRTGDIAEVEKIPGYSDLPQVKSGA TLAGNEAVVAGLNTPTSLSRAWVLEQVKPTLKKLS >gi|227860863|gb|ACLH01000057.1| GENE 32 31007 - 31315 254 102 aa, chain + ## HITS:1 COG:no KEGG:cauri_0715 NR:ns ## KEGG: cauri_0715 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 102 1 102 102 192 100.0 5e-48 MESKTLTSLVFGNVVLESQMTKTIIVVYADDMRSWYFRPSPYTELKVPLDELQGKLSRER AELISERIFDGVKLELEESYSGGVDRAQKELCGWLLCEESAA >gi|227860863|gb|ACLH01000057.1| GENE 33 31323 - 32528 1125 401 aa, chain - ## HITS:1 COG:Cgl1866 KEGG:ns NR:ns ## COG: Cgl1866 COG2311 # Protein_GI_number: 19553116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 4 401 17 423 445 235 40.0 1e-61 MQEKQQRLIVPDLARGTALLGIAMANAVQSWVVNDWSIGPSSTVGGVRPGSTLDIFSAVF TAMFVRVRGLPMFCMLLGFGIGLIAASLQRKGYTIKESRRVLIRRYGLLAVFGLAHGFVL FDGDIMLVYGLMGIALAWCFTLSTRTLRRIAYWFFGGYAAFAGSGALGAYFGYFNPLPSS WPMTGDLVTFGDYFARNLRGEVAALGQVPIVFVGLVGAFLIGYVWAREGVLANVSAHRRT LITWVVIAGAVIVFVGLPWGLTAAGVLPIELEPVFFMLNQACGFLTGPGILAILALLTEK LNNRVPRWAYAFVALGKRSMSGYIAQSVLFIVLVTPAGFGLGADASVSGKLGIGLLVFVL TLLLAALLEAWGKPGPFEWAHRRLAYGPTGRIEPKSAPAPA >gi|227860863|gb|ACLH01000057.1| GENE 34 32588 - 33037 498 149 aa, chain + ## HITS:1 COG:Rv2616 KEGG:ns NR:ns ## COG: Rv2616 COG4762 # Protein_GI_number: 15609753 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 26 102 44 120 166 61 45.0 4e-10 MPEPLSYSSAEGFPQLHMSRVIDADFDIAADKLFRWGLQRSGLFRVRPSHATVEEGAEVG LGLGPWEFRCRVVDVFHEEGRCGFTYGTLPGHIERGEETFTLERLRDGRTLLLVDASSQP AHLTFLRPLLDIPRRALIRWFYLRALDER >gi|227860863|gb|ACLH01000057.1| GENE 35 33052 - 34014 786 320 aa, chain - ## HITS:1 COG:no KEGG:cauri_0712 NR:ns ## KEGG: cauri_0712 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 320 1 320 320 636 100.0 0 MTAEDDFYALKYSFDSVFTRPIIDFAESARPDSPTTSKLCGTPYLPEHAPYPEYDDEPMC FIAQFNFAEFEPLPGFPTSGLLQLFVPGEYGWGMELCNKYVATGERTSTPFARYLEDISA PHVGEVPEEVEDSGEHPAEEPLEATTIDGKLSELSVTENAHEFGRTAFWNNDLRALLRRG EDLVDVHTYGWDIITRRVIDGETTIEVTKLPGDTKDGQKELFDEIVARVEAEGFSVDPTA EESEERVNLEDGQCEVRLGGYATYWNPSKLPISDEHIALATVDNGGTFEWGDGGIGNFYI HPEDLAARNFDKVLFDWDCG >gi|227860863|gb|ACLH01000057.1| GENE 36 34268 - 36094 1779 608 aa, chain + ## HITS:1 COG:Cgl0992 KEGG:ns NR:ns ## COG: Cgl0992 COG2304 # Protein_GI_number: 19552242 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Corynebacterium glutamicum # 5 576 1 568 594 374 39.0 1e-103 MAPTMVVFDSSGSMITNDAGGQTRIDAAKDAARTFITEAGDDAPLGLVTYGGNTGEAPED EAAGCQDITVVTPPEAGNSEKMIAHMDGLQPRGFTPIGESLRKAAAELPKEGQRSIILVS DGVATCTPPPVCDVAKELKEQGIDLVINTVGFNVEPEAQQELQCIADATGGTYANASDAD SLAKELNRAAPRTFNAYESNLEEIEGGKTEGSPAKVDRDIEAFSTTLLPTEGKGHSAESE TFFTTPIAEGERVVISATTTQTPSINNFRKGGSFHLGIDAAELSCELDSASATDTSVNQY QTATLYSTQGGEEGCDSDQLAFSIQRKGDWKQDEELGVEVTITRFGEPDMDGQPDPAEEK TEPDTVTASGDPTEITPGTWFTDAAELTPQQPVRAQIVPGETHFYRMPVEHGQQLAGNIA MVEEADDFDNNGPGDALIVTAYNKARAQIDVEGSHATIQKDSKIDFSYPAPILFSNRYGG SHNDGAGGLGIEKVWQGGEQYIAVNYEKLLTDQEIDENTQLPVLTYDLVADAVGDPVPEP TFAPVKLETEKPSAPAEKDAKEDTENRAQEDDDSSLFSGFPFLLVGLGLLVLFGLVVALV VVIRSLNR >gi|227860863|gb|ACLH01000057.1| GENE 37 36214 - 37044 238 276 aa, chain - ## HITS:1 COG:MA0958 KEGG:ns NR:ns ## COG: MA0958 COG1712 # Protein_GI_number: 20089836 # Func_class: R General function prediction only # Function: Predicted dinucleotide-utilizing enzyme # Organism: Methanosarcina acetivorans str.C2A # 7 276 3 268 271 101 29.0 2e-21 MSASAPRVLLLGFGAIGRQLVTLFDPSEFEVSGFVRDAAPHRERGALGVSLHNDNLLELI DAHDIVVECAGVAAAKEHGPAVIARGKDLVLTSVGALADPDTRQALLSGPGKVHVTSGAI GGFDLWAALAESNAVDTVKIRTTKNAESLIQGWMNDAERAQLESPTEPFVLFSGRPSDAI AKFPGNVNVSVALAWATRGRGSSDDELLARSLERVSVELVASPNLIKTRHDIEVSGSAGA FSLVSESSPHPVNPKTSAITALSVAHTLRQAVGSLQ >gi|227860863|gb|ACLH01000057.1| GENE 38 37395 - 40421 4121 1008 aa, chain - ## HITS:1 COG:Cgl0762 KEGG:ns NR:ns ## COG: Cgl0762 COG1615 # Protein_GI_number: 19552012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 23 1006 1 967 967 1355 67.0 0 MELELASGLNRPTAPMKRPPKFLSWVVAIIAVLLFIGPMLVGFYTDWKWFGAIEYRGVFT KTLITRIVLFVLFGLVAAAVTYVAGLIVWRGRGDSMDMADFNSPVYQYRKSIESTMSVFL KVIPVLVGVVSGLLGQANWRTVMLFLNSHDFGVTDPQFNHDLGFYAFRLPVWSMLVNAFS MLVAVCFLIALVGHYILGGIRLGNRAAGVRGSLSKSARTQLAVTGGIWMLLQVAGYWLGR YELLYNQHSLFTGGSYTDINAYLPAKIILMIIGVFVAVAIFSAVVIKDLRIPGLAVVLMV LSSLVIGQGWPLIMERFSVNPNRQAKEAESISRNIESTRFAYGLTDDKVTYEENWGADDV ADDKVASDDSTISNLRLLDPDILAPTFTQMQQLKNFYGFPETLAMDRYEIDGELRDFVVA ARELDPNELQENQQNWINRHTVYTHGNGFIAAQANTVDEVARDAGSARGGFPIFTVADLQ TQAGKDAEGEGETKNAEESLGIKVDQPRTYFGPVIASAQDGMDYAIVGKTGDESVEYDTD TSTYTYDGKGGVDIGNIVDRTAFALKYQELNFLLSDRVGPESKLLYDRDPRERVEKVAPW LTTDSSTYPAVIDGRIKWIVDGYTTLDSLPYSQRTSLTETTQDAQNPTGTTQRLVNDQVG YIRNSVKATVDAYDGTVDLYEFDTEDPVLKAWEGVFPGVVKPEVEISDELRQHLRYPEDM FKVQRNLLAKYHVDDPGVFFNNDAFWSVPEDPTAGESQGLNQPPYYVLASDPETNKPSFQ LITSYRGLNRQFLSAHMAVSSDPDTYGDITVRVLPTNTQTQGPKQAQDAMMSSDQVARDR TLWQGSNDLKNGNLLALPVGGGEILYLEPIYSQRKGQESAFPKLLRVLVSYKGRVGYAPT IGEALEQVGIDPKAAQDITEIEGDSGKQTEKDEQSTDSEKKDAEDAKDSDASAPASAPKA SSEGEAIDAINKALDGVDKAKNGSFEEYGKALDELDKAVEDYRSLQSQ >gi|227860863|gb|ACLH01000057.1| GENE 39 40500 - 41090 588 196 aa, chain + ## HITS:1 COG:no KEGG:cauri_0708 NR:ns ## KEGG: cauri_0708 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 196 1 196 196 338 100.0 9e-92 MSSQPSSQPAVHRALNKAMREAVDFIHAEGWDAPPTLFALVPTELVAAQLGDVDDSSPLT LVVQELPEGIEPGSEHLADYVSRLAWPQEIAGVILAQEIMFKDTSDAALGDARPARLFSG VLRATALDGSSTADSESFDDDGAELTLLQLRPTEEELAEAGPFAEDDIQLRGGPNVAPGV IAALRYGLEQDPEEML >gi|227860863|gb|ACLH01000057.1| GENE 40 41111 - 41848 780 245 aa, chain + ## HITS:1 COG:no KEGG:cauri_0707 NR:ns ## KEGG: cauri_0707 # Name: not_defined # Def: beta-N-acetylhexosaminidase (EC:3.2.1.52) # Organism: C.aurimucosum # Pathway: not_defined # 20 245 1 226 226 345 99.0 1e-93 MAISAQLSGLGTQLIEESLVRLTSRFTAAASAVLATGCLLSACGKDDVPSPEPTPASEAT TAAAKKTSAPAPATSAEESETTTPATSESADSSEAEDESSTRSSADRKDKDKDASESAEP SGKFTDSVEQAYKIFGGLVPEEIFAQFDRCDPNGVTDSFNCSGSEVGQFQFFKSKTKASQ TTQVLTELRSSRVIEDSGNRVVGWSMLGNTAILTVVDNDEGLIMQQMISTDQDDPEERLK ELGLV >gi|227860863|gb|ACLH01000057.1| GENE 41 41853 - 42929 326 358 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 [Bacillus selenitireducens MLS10] # 13 349 11 348 350 130 28 5e-29 MKTPQNPRARRLSTLTWGAIPVVLTGALLSIDHIPGTDITLSVPYAAEGPGPTLDTLGEV EGKPVVNVEAPETFQPKGHLNMTTVSVRTNMTLAQALGLWLFTDDTIVPIENIIPQGKTD KEVQEANQQAFTQSESAATVAAMDYLDKPVRIEVAQVLDDGPAAGALDDADIITTVNGDK VTEPGQVQEKIQALQPGDEVELGIVRKGEEKTVRVTLGSHPEQGDMALLGILMTSVPTED ITVDYNLQDIGGPSAGMMFTLAVIDKLSSEDLTGGRFVAGTGTIGEDGEVGPIGGIVHKV SAAKEAGAELFLAPAKNCAEAVSRDTGDMVVAKVHTLDDAIEAMQDFAEGKPVETCEG >gi|227860863|gb|ACLH01000057.1| GENE 42 43023 - 44450 1652 475 aa, chain + ## HITS:1 COG:Cgl0758 KEGG:ns NR:ns ## COG: Cgl0758 COG5282 # Protein_GI_number: 19552008 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 40 441 49 452 475 503 68.0 1e-142 MSNGFGFSFPNNDDDDDNDRRDQNPFGAFGFSAGNGGLGDLLNQFGQMLSGMGSSMNSPE GAGPVNYDLAKRIAHQQISRDKEVSEQDRTAVQEAVRLAELWLDDATILPTASGTVTAWN SAQWLDETLPMWQRMVTPVAEHMNSAQLESLPEEAREMMGPMSSMMNSMSGMNFGMKLGH ALGDLAAQALTGSDFGLPVSPAGTTALLPHNIQAIARDLNVPGQEVLVYIGAREAARQRL FKHVPWLVERLVSSVEEYAMGLVIDTSHIEEATRELNLESGDPQAIQDAMSKLQGMDLSP RITSRNAGAASRLETLLALVEGWVEHVVTEALGERIPSTKAMTEAWAHRRSTGGSAEKAF SQVVGIELNTPKVEAAAELWRRATVAVGADKRDSAWDHPDLLPTAEHLENPASFIDGLLD DTPDEGFEAEFSKLEEMLRQQDAGDDASDNTSDSAGEDTDADGDDNKKDGPEEEN >gi|227860863|gb|ACLH01000057.1| GENE 43 44447 - 44944 390 165 aa, chain - ## HITS:1 COG:Cgl0757 KEGG:ns NR:ns ## COG: Cgl0757 COG1451 # Protein_GI_number: 19552007 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 5 164 2 161 162 200 66.0 7e-52 MSSNPEVRVIRSARRRRTVQARVVDGVLEVRIPAWMSAAEEREAVDGIVAKVCKKHTSSQ LSDDSLADRARTLNARFLEGRATVGSIRWVSNQKSRWGSCTTSTGDIRISDRLQDVPDYV LDAVIIHELTHTFIPGHGPDFWEWADRAPKAERAKGYLEAYQRFR >gi|227860863|gb|ACLH01000057.1| GENE 44 45019 - 45849 451 276 aa, chain + ## HITS:1 COG:no KEGG:cauri_0703 NR:ns ## KEGG: cauri_0703 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 276 1 276 276 516 100.0 1e-145 MSAQTYMLAPETTILEREPGMLQCGMDATRVGVFEAHPQLAGLLNRLRTPLTRQTIEKSI ENTGMSPSAARSLVEDLISYRVLWPAPRPQRVAVLGTSALANELRDVLLGDSFQPRSPLH SETPAEYISNVAGHLPIVAVDMLDGATEWAQALRNSPATWLPVSMIDARGIIGPVRIDGA GPCPLCAHLHRIESDELWHEVAHRAAAVEAPGDPIVRTAIVTHAVVIIRRLLGRPAPPGA PGGKPLAGELTEIDLYGLEQRRLLMEHPRCTYCAAS >gi|227860863|gb|ACLH01000057.1| GENE 45 45856 - 47907 1965 683 aa, chain - ## HITS:1 COG:Cgl0755 KEGG:ns NR:ns ## COG: Cgl0755 COG0210 # Protein_GI_number: 19552005 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 4 680 3 677 678 858 67.0 0 MRPDLSLLDEDQRAAATAPRGPVCILAGAGTGKTRTITYRIAHMVDQGFVNPQRVLAVTF TSRAASEMRERLNQMGVGGVQAQTFHAAARRQLKYFWPQVAGDLPWQLIDNKFSLVARAV RSLGLDNNKDTIRDFLGEIEWAKSSLISPEGYPGVIESTDREAPGDPAKVAEVFRRYEDM KATPDLMYLDFDDLLMHIAGAIENVPSVAEVFREQYRTFVVDEYQDVTPLQQRVLEAWLG ERDDLTVVGDANQTIYSFNGASPDYLLNFSRTYPQATVVKLQRDYRSTPQVTDLANEVIS KASGRAAGTRLELQGMREPGPEPTFKAYESEEIEAKEVAGQVLTLLNQGVKASEIAILYR INAQSEQFEQALADAGVVYQVRGGEGFFRRPEILEAIRVLIAATRRDDLPNDPVAVARAA FVELGLSATEPQGAQARERWQSLTALVDLIAQIVEDHEGIDLPGVLGELHRRSENKHNPT MEGVTLATIHAAKGLEWDAVFLVGLTEKLLPINHAIKSGDEHVEEERRLFYVGITRAREH LALSWALAKTTGSRASRERTRFLDGVVPGIEESQSSNRRYRPRRCRVCSGQLSSPAEKVL GRHEWCEYEGDEDVFNALRAWRASVAKDSQVPAYVVFSDATLQAISEALPANEAELLDIS GVGPSKLERYGAEVLQIIASSRG >gi|227860863|gb|ACLH01000057.1| GENE 46 47879 - 48613 468 244 aa, chain - ## HITS:1 COG:Cgl0754 KEGG:ns NR:ns ## COG: Cgl0754 COG2816 # Protein_GI_number: 19552004 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Corynebacterium glutamicum # 10 232 3 232 238 155 43.0 9e-38 MFLPVTETGLVPVSPQGQPVFLAKPAGEIVVAAGDIHAFLVESKAAERLGTLRDATFFNG QRDILKALHLIRNRREARFDPRTGRELSYPAPGAVGHDGERLVFPRLDPAVIGIIHHAES DRILLARNRHRPGFFSLIAGYVDPGETLEEAMIREALEETGRRVESVSYWGSQPWPPSGS LMVGFSAVTEDVQPVCDTDEELAEVRWVSRAELPELTIARKGSIAHTMIMEWFHGDETGS VPAR >gi|227860863|gb|ACLH01000057.1| GENE 47 48613 - 49725 1074 370 aa, chain - ## HITS:1 COG:Cgl0753 KEGG:ns NR:ns ## COG: Cgl0753 COG1226 # Protein_GI_number: 19552003 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Corynebacterium glutamicum # 12 361 3 352 353 429 63.0 1e-120 MPKHLGKRITSRFLSQVELTSQPDHALLDVITIPRTQSTSPWKQLARRVIWAMGLMVFVT IIVFFDGDGYSEDLSFLDAAYYSAVSLTTVGYGDIVPVTPTARFINLMIVTPARLLFLVL LVGATLSVLTDRARRTFEIQNWRKQLRNHTVVIGYGTKGAGAVAALIADDVPASQIVVVD NNRAALASAEHHGLVTIYGSGTKQDVLRIAGAQHASSVVVTPSTDDTAVLCTLSVRELNP KAKVVASVRESENRHLLLQSGADSVVTSAETAGRLLGLATVTPTVVEMMEDLLSPNEGFS VAERAVREFEVGSNPRHLADIVLAVLRNNELHRVDTADAYALKPGDRLLYIKHEMQQAAE DTDEDEDEGN >gi|227860863|gb|ACLH01000057.1| GENE 48 49768 - 52980 2957 1070 aa, chain - ## HITS:1 COG:Cgl0752_1 KEGG:ns NR:ns ## COG: Cgl0752_1 COG0210 # Protein_GI_number: 19552002 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 10 794 5 807 812 716 52.0 0 MPKNPAHHFSPEQLATALGKPFPPTQEQAAVIDGPLGPKLVVAGAGAGKTETMASRVVSL VANGLVRPEQVLGLTFTRKAAQQLEQRIRRQLLTLRSSGILAPGSPAAEAVENIAPNVST YDSYAGDLVREYGLLMPVEPNARIITEAERYAIAHEVVSNYTGSLSTDSAVATVTATLLK LAETMDGELKDPQDLYEHEDIFRKTAEDLEKSKRTKGEFGKDLQKYLDTQRLRLEYLPLV EALKKEQSERGVITFGEQMSIAATLAKNFPLLGEQQSARYRVIMLDEYQDTSHAQRILLR SLFGGEREGLSVTAVGDPMQSIYGWRGATAENLEAFVTDFPQPDGTPAPKDQLTTSWRNP STVLSLANDVASKLFSLSPGERPVDELSPKPTAPAGKVELGYFASEDEERAFIAEHLRRL YESTPEGEDFSAAVLVRTNRQSPLIAAALDEVGVPNEIFGLGGLLWQPEIQDLVAVATLL VRPQDTAAALRVLTGPMCGLGIADIQALHSRQRNLAGATEGRTRWNGGDPLDHLATQVEE ITAEGPDQVLGLADALADLGERDRYSAEGLERMEEVSSKLRYLRTYSLGKTLNDIVADIE LLFGLRTEVLASGKPGRATHLDAFADFVAGFHGDGLAGLLDYLELAKEKEDGLELGEVPL VRNRVQIMTVHKAKGLEWEHVCVVHADSSSYKAQAETFLTKIEKAPGDEDVIDVPEDAVT RSDFDKACTAFKEQNREFQAEEAARLFYVAMTRTESTLTVTGSGTNRLKGKSKKGPYSYL QLLADKHPELVGHWDIPETPVEEEEGSALQASFPSLSPQPEALNAAEAVRAAMEDLPPLR DGEVFGLWEQEASALIEEHKALQAPVVDVELPGELTASDMVAMSADPTQFARRQRRPIPF KPNSYAKRGTAFHAWLEDRFGAPALLGEDELPGSHDEPDHDLESLKESFLASEWAQRTPA FVEAPFEITIGDSVVRGRMDAVFQQPDGSWLIVDWKTGRRPQGAALASAQIQLAVYAEAW RRIHGVDTVRAAFYYVYENYLLEPDDLPAGARLAELLSSAVSTPPGLSLR >gi|227860863|gb|ACLH01000057.1| GENE 49 52973 - 56149 2241 1058 aa, chain - ## HITS:1 COG:Cgl0751_1 KEGG:ns NR:ns ## COG: Cgl0751_1 COG0210 # Protein_GI_number: 19552001 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 15 785 8 749 756 678 52.0 0 MKYSSESPTRTGVTLPPSPEVRLIPRSRRATSREWDVPLPQQGTWRVLGAAGSGVSSLLI DVVLAQLNVGADASGILVVAPSKESGSLLRRELAENLDDYAAQTSMVRSVHSLAFALLRQ SSEEELRLITGAEQDAVIRELLQGHAADRRGVWPEEMRPALEYVGFARQLRDLLLRAIER GLGPTDLEELGQRYGRPMWVAAGDFLREYERTQALAGSHSYSAAELVSQVLLRPELVREH PWHTIVVDDAQLLDPTSGQLIAELAKTARLTVIGGDPDQAVFAFRGANSEFLTTWKAENE LRLSSTHRRPSPACVSVVDSRGTLRDVLANTVRRRHLEDGVDWRDIAVIVRSTGDIGPAR RTLLSAGVPVHINPTDVVLAEQRLVKAVLLALRALENELEPVELEDLITGPVGGADPVTL RRLIRGLRRWKPEQRGMNTLRELLDGELPDFNNLLTEREEAILARIRGVLSAGRTALQEG AAVEEVLWEVWQATGLDTRLQAAALRGGAAGSQADRDLDAMMALFDAAGDYAERRPAASL ESFILYITEQELPTGVRDRRSALPNAVEILTAHGAVGREWDTVIVAGVQEGTWPSVGETG SLFGQEDLIDLLDRGITPGTPVSHVSGRLAEERRLFHVATTRHRHRLLIVAVDSPEGDVV EEPSRFIDEFLSARGVDVPGAQARREAGKRLARQAWPRELGLEVPEPSPVTLHSGASADE DIDPLDVSVLSVPAFVAQLRRCATDPEAGEAERSQAVRQLARLAEAGVPGAHPDQWWAAR DVASELPLRGSDTVSPSRVDALLSCPLNAVLGQLVEDDSANINLLRGNLAHAFLEALGRG ASTEPAKRLVLDAFDSLLEGPAWHREASLADFERLIDRTHSWVLSSSTSLEPVGVEVPVT VDIGPDVTIRGFIDRLAKAGEDYVVVDLKTGTKVPSADSAQNNTQLMTYQLALAHGELVT APVEPGGESQAVSIRTGDGLPRGGGVLVYPRSTTASVSTREQATKPPEELEEFAQALPSL VAELRGPDLTARENADCDRCPIRSICPVMNEGGLVTDA >gi|227860863|gb|ACLH01000057.1| GENE 50 56153 - 56926 568 257 aa, chain - ## HITS:1 COG:no KEGG:cauri_0697 NR:ns ## KEGG: cauri_0697 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 257 1 257 257 474 100.0 1e-132 MPLPPEPVLAAFNAEFHPRRTQGELVGPAWDNGIRVGDIVFAEARPWTGWSAKVREKLSL PGARIARPVLTADGRYTAAGWKATQFVEGQLRGRIDETVQMALCLDEALELAPLPTVDRR DDVFARAERAAWEESGEAYSDAELAQLPLVTAHMDVLGTTVFSGANPPALTDIVPSAAPR PVGWSAALVMVDGLIAGVVDDDICARFASVPGIQQLLLRAVAYRRYVNTLHPRSKATVRS NIERVEEALVSAASDTL >gi|227860863|gb|ACLH01000057.1| GENE 51 56956 - 57891 769 311 aa, chain - ## HITS:1 COG:no KEGG:cauri_0696 NR:ns ## KEGG: cauri_0696 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 311 3 313 313 580 100.0 1e-164 MENPADFKQHPHPVSAVERFAREYGWWRVVAIPVMVVITVWVLVDVFRSPAQEADVTAAR ETSASSTAASVSSRKGPDPANASAVAAAKDGLPAGGDFTEQGEETYRDAGPSTMHAGKGG KQTIRFSVEIENGIDTSAYGGDGAVVALVDATLADPRGWTANGDFEFIHVKADDNPDTHI RLTSLGTTAKLCGAQLESETSCHTTITGESAVNLNESRWVRGAKPFEGDLGNYRQYLINH EFGHAIGFAAHQACGGDGKLAPVMMQQTLSLNNAQLFEKEPNEVYPDEDVTCEPNPWPYP NPANSDHAKPE >gi|227860863|gb|ACLH01000057.1| GENE 52 57930 - 58151 379 73 aa, chain - ## HITS:1 COG:no KEGG:cauri_0695 NR:ns ## KEGG: cauri_0695 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 73 1 73 73 127 100.0 2e-28 MDIKFGFADTARELVIHAEGEREELTQTINNALADNSTLELKDTKGRSYIVRTERVVYVE IGTARAHTVGFAG >gi|227860863|gb|ACLH01000057.1| GENE 53 58254 - 59642 1007 462 aa, chain + ## HITS:1 COG:Cgl0747 KEGG:ns NR:ns ## COG: Cgl0747 COG0513 # Protein_GI_number: 19551997 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 23 424 1 406 408 568 72.0 1e-162 MLAPKSSRDSRESPTFAELGVAVEICDALADNGITRTFAIQELTLPIALNGQDLIGQART GMGKTYGFGVPLLDRVFDDADIPELDGTPRALVIAPTRELAIQVSGDLELAAANLPLSVV TLCGGRPYEEQITQIESGADVVVGTPGRLLDLCQKKHLSFDHVSVLVLDEADEMLDLGFL PDIEKILSLLHGNPHQTMLFSATMPGPIVTLARTFLEKPVHIRAESGDAQHTHSSTRKVT FQAHRMDKIAVLGKALQAEGRGRTIIFTRTKRSAAAVAEELAQRGFRVGAVHGDLDQKAR ERSLNTFREGTVEILVATDVAARGIDIEDVTHVINYQVPDDPMTFVHRIGRTGRAGHTGT AVTLVGYDELSKWQVINDELDLGQPEPPQWFSTSPELAEALDIPEAVADTVGPPTTVLGA PRRSNSRGESPRGDSPRSSTASARASRRTRSRTRKHRKGGRR >gi|227860863|gb|ACLH01000057.1| GENE 54 59639 - 60925 1077 428 aa, chain + ## HITS:1 COG:no KEGG:cauri_0693 NR:ns ## KEGG: cauri_0693 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 428 1 428 428 777 100.0 0 MSTEHGPESAKKPSSAKKAPVLRSTKADWLAVGAISAVCAIAIGGAVITAPIHKSELTPA VDAASDAETQTLDSVPDSLTDTFSVPNTVVPGQSRAISTKGLLITHDGDTLRASDTSGDT VWTYERRDADLCSLGTAWNKIVATYDVGNGCGDVVAIDAVSGQYSDTRSARNSEQVVPIV SNDRVGTVSAERIELWRSDLVRTVEYGDVEAKQEPNLQPHEDCAITSALTRTETMAVTES CPDFPDSTWLRIQNTTPEDARTPEISKDIEINNPGARLIAYGQEAAAVFLPGDAPRIVSY NFEGERLSSTDVEPSKSITNSASPFAPAVADLPHHMTWFDGERLYLFTPTELKVDHVLEQ AVGTGIAVGERLLVPTEEGIDVVDWATGKTERSIPVDRDGYTGPISLTLAGTAIVEQRGN TAVALTAS >gi|227860863|gb|ACLH01000057.1| GENE 55 60954 - 61412 555 152 aa, chain - ## HITS:1 COG:no KEGG:cauri_0692 NR:ns ## KEGG: cauri_0692 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 152 1 152 152 219 100.0 3e-56 MNKKQKQSSTTPARTAGGRAPGAVIAAAGIAVLQSIAVIIFGIFLVVRELTGAENDSMVS DSGAAGFVGLGTAIFVFIVFGFVIVASWAFVKGKRWGRGAIVLVEFILGAIAFQMFSGGS AALGVVTLASAAVVLYLLMMRREAAQWAESHF >gi|227860863|gb|ACLH01000057.1| GENE 56 61462 - 61677 113 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183613|ref|ZP_06043034.1| ## NR: gi|262183613|ref|ZP_06043034.1| hypothetical protein CaurA7_06446 [Corynebacterium aurimucosum ATCC 700975] # 1 71 1 71 71 127 100.0 3e-28 MLHAPTDILLSAYTVTMLIFSFPPSTFRGQREQSGFDAIQVTTLTPFAPLTQVEALLTGF LQDPIHNKCVN >gi|227860863|gb|ACLH01000057.1| GENE 57 61991 - 62248 421 85 aa, chain + ## HITS:1 COG:no KEGG:cauri_0691 NR:ns ## KEGG: cauri_0691 # Name: whiB1 # Def: WhiB transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 85 1 85 85 142 100.0 6e-33 MDWRHEAVCRDEDPELFFPVGNSGPALTQIAKAKLVCNRCPVASSCLKWALESGQDAGVW GGLSEEERRAIKRRNRSRGRARVSA >gi|227860863|gb|ACLH01000057.1| GENE 58 62345 - 62419 75 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKRGRKRKDRRKKSANHGKRPNA >gi|227860863|gb|ACLH01000057.1| GENE 59 62537 - 62809 226 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183615|ref|ZP_06043036.1| ## NR: gi|262183615|ref|ZP_06043036.1| hypothetical protein CaurA7_06456 [Corynebacterium aurimucosum ATCC 700975] # 1 90 1 90 90 147 100.0 3e-34 MERATGRNCGACNSPEVEALFRELFDESTSYARALEIREHLAQCDACQQRVESEEVIRAL VRKCCGGQAAPQSLRQRICVEITRTEITWG >gi|227860863|gb|ACLH01000057.1| GENE 60 62809 - 63423 687 204 aa, chain - ## HITS:1 COG:Cgl0743 KEGG:ns NR:ns ## COG: Cgl0743 COG1595 # Protein_GI_number: 19551993 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Corynebacterium glutamicum # 19 203 18 202 206 255 69.0 3e-68 MVGMATETTSEMLQKQRLFEEQALPLLDQLYGGAMRLTRNPQDAEDLIQETYLKAFSNFD SFKQGTNLKAWLYRIMTNAYINSYRKAKRRPVESSADELSDFQLYTTSGHDSTGLESAEV EALKQMPDSEISEAMNDLPEDYRMVVYYSDVVGLAYKEIAEVMGTPLGTVMSRLHRGRKL LRAALKDVAREKGIGRNHPEMEEK >gi|227860863|gb|ACLH01000057.1| GENE 61 63452 - 63955 581 167 aa, chain + ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 10 164 2 155 159 130 47.0 1e-30 MSKKTPRAATPALKLLEEAGIDHHVSTFEGGRENFGEAAAAALDVAPERIFKTLVIDLSA GKGPKRQLAVCVLPVTHQLSLKKAAAAFGASKATMAAPADASKSSGYIPGGISPLGHKHV LPTVVDETALLFDTIFFSGGKRGLDIEMNPEDLPRVLELSFADVLAD >gi|227860863|gb|ACLH01000057.1| GENE 62 63966 - 64628 728 220 aa, chain - ## HITS:1 COG:Cgl0741 KEGG:ns NR:ns ## COG: Cgl0741 COG2135 # Protein_GI_number: 19551991 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 25 212 20 207 207 208 57.0 5e-54 MCGRFVLFTESLLEEVGAWESITEVHAPEGLPPARYNIAPTQPIAIVRVAEETARVEPAR WGLIPHWKKNLDGPPLFNARAETVAQKPSFRDAFKAQRCVIPLDGYYEWKAGEDKKAKKQ PYYVTGPDGLLWAAGLWATGMERLSATMVTTDATEEMAWLHHRLPKFLTTEEIAPWLAGE ALLEPSSVCGFQARPADLAVGNVRNDYAELIDEPPATTLF >gi|227860863|gb|ACLH01000057.1| GENE 63 64627 - 65931 1134 434 aa, chain + ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 12 432 14 429 430 512 63.0 1e-145 MPFIMDYMSAFWSAPQSTGPLSWTQEVPGSKSMTNRALILAALADSPSIIYNPLVSRDTD LMKEALKAMGVGISEWGPHLRVTPGELHGATVDCGLAGTIMRFLPPVAALADGPVVIDGD PYARKRPMSTMTTALRELGVDIEGDNLPLSITPHGIPEGAEVTIDASASSQFVSGLLLAG ARYRNGISVRHEGGTVPSQPHILMTICMLREAGVHVLASEDNWVVRPGKIEGREWYIEPD LSNATPFLAAAAVSGGSVSILNWPEETTQPGDSFRGILEQMGAQVEYVPQAPCQDPYLQV TGPEEGLAGLRGVDLDMGDIGELTPTVAALCALASTPSTLTGIAHLRGHETDRLAALATE INALGGNVTELDDGLRITPAPLHGGQWHSYADHRMATAGAIIGLAVDGVEVEDIDTTSKT LPGFAKMWEAMIHG >gi|227860863|gb|ACLH01000057.1| GENE 64 66034 - 66945 670 303 aa, chain + ## HITS:1 COG:Cgl0739 KEGG:ns NR:ns ## COG: Cgl0739 COG1162 # Protein_GI_number: 19551989 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Corynebacterium glutamicum # 1 302 1 292 294 397 73.0 1e-110 MVITKDRGRWGVALDNDGPVVTAMRAREMGRTPIEVGDRVGVVGDTSGKKDTLARIVKLE ERTSVLRRTADDTDPYERIVVANADRLLIVSAVADPPPRSGFVERALIAAFAGNIQPVLC LTKTDLTDPTPFAQEFADLDVTVVEAGVDDGLEQVCAAIDGHVTALIGHSGVGKSTLVNR LVPDANRETGEVSAVGKGRHTSTQSVALRLPAEGSTPHGGWIIDTPGIRSFGLAHIDAEN VIEVFDDLAKAIEDCPRGCTHAGPPADPECGLDLSLEEGTASARRRDAVRGLLASLRTNV DWA >gi|227860863|gb|ACLH01000057.1| GENE 65 67016 - 67621 573 201 aa, chain - ## HITS:1 COG:no KEGG:cauri_0684 NR:ns ## KEGG: cauri_0684 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 201 1 201 201 316 100.0 5e-85 MSSSRLRRVVAASSLSVAVLAGGVAVPTAGAVSTTIKDEKCTITLSEEEASDLKNAESKE NDVDSSLLKNGLKISPKDAEKRARDVENQSDELYRALADYEAERELGDENAVKRAKNNIA VVEAFRGIAPEYVKALNACAKKEEFNKEEETGGNTSSNIDTGGAIILGVSGGLAVILMVL RAAGPFLKTVLPPQLAAMLPL >gi|227860863|gb|ACLH01000057.1| GENE 66 67675 - 67980 290 101 aa, chain - ## HITS:1 COG:no KEGG:cauri_0683 NR:ns ## KEGG: cauri_0683 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 101 1 101 101 150 100.0 2e-35 MKASRLASLVTAAALSTAALVAVPVAGAEEPAAPIAQEHADRSNPTPKNPDPDTGVTTPW LRILEGSSQGPVAIVIAILFGIISIGFAAYKEFGDYLPKLG >gi|227860863|gb|ACLH01000057.1| GENE 67 68066 - 68584 556 172 aa, chain - ## HITS:1 COG:no KEGG:cauri_0682 NR:ns ## KEGG: cauri_0682 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 172 1 172 172 298 100.0 5e-80 MSKDVRVFLPATFGMLAELEETGQLAARSGWGFALTPALREFYTEGDEEEIEYSAFLEAS MASLRLLAVGDEEKFPHRRVVISVDVDESVVTPKPDMGEPVVALNPATITKANLQAIHVD IEESEAATAKAIDAIDNADLGDEDAELAVGDALDNFMAFYDPTELPILVELL >gi|227860863|gb|ACLH01000057.1| GENE 68 68585 - 68995 540 136 aa, chain - ## HITS:1 COG:Cgl0737 KEGG:ns NR:ns ## COG: Cgl0737 COG1011 # Protein_GI_number: 19551987 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Corynebacterium glutamicum # 1 136 1 136 136 163 69.0 1e-40 MRGLIVDFVGVLDGTEEDVKRWRELFAAAKSNGVATAILSNDPGGPGAEHIREWEYRGIV DAVVLSGEVGAEKPDRAAFQAAADAIDLPINDCVMVDDSIVNVRAAVENGMVGMLYTVFD RTSVEVQAVFDIEGEF >gi|227860863|gb|ACLH01000057.1| GENE 69 69217 - 69621 186 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227502895|ref|ZP_03932944.1| ## NR: gi|227502895|ref|ZP_03932944.1| hypothetical protein HMPREF0276_1498 [Corynebacterium accolens ATCC 49725] hypothetical protein HMPREF0276_1498 [Corynebacterium accolens ATCC 49725] # 1 127 1 127 127 123 50.0 3e-27 MYTPIPGMSHLQLYVAPQHIRYEREPTARDLATREEIRGLIVIVLEVAAALRPLSHLNNP RFAPEITKHVRAWRKAQAAAESHGGMTLRSLHARSNGEFFGSVLLGSTRRAFTGAATGRY LRSFRLLSGGLHTH >gi|227860863|gb|ACLH01000057.1| GENE 70 69690 - 70049 344 119 aa, chain - ## HITS:1 COG:no KEGG:cauri_0680 NR:ns ## KEGG: cauri_0680 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 119 1 119 119 181 100.0 9e-45 MRRFSLRVGLSVFASATLLGGGAAASAVELAPEEQCQLASVLGSQSDNSLEDAELSSQDV VSTQCGAVSEPESLDEATAKLPVVGATMFGGISLALVSASAAFAGIDWTPILIKLGSLF >gi|227860863|gb|ACLH01000057.1| GENE 71 70183 - 72735 3743 850 aa, chain - ## HITS:1 COG:Cgl0735 KEGG:ns NR:ns ## COG: Cgl0735 COG0653 # Protein_GI_number: 19551985 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Corynebacterium glutamicum # 1 844 1 844 845 1326 80.0 0 MFGLSKLLRAGEGRTVKRLAKIADDVIALEDKFAALSDDELKAKTDEFKKRLADGEKMND ILLEAFATVREAAWRVLDQKHYKVQVMGGAALHFGNVAEMRTGEGKTLTSLLPAYLNALE GKGVHIVTVNDYLAKRDAEMMGRVHRWLGLTVGVILSEMRPAERKEAYACDITYGTNNEL GFDYLRDNMVRSLNDTVQRGHNYCIVDEVDSILIDEARTPLIISGPVDGSSQFYGVFSKL APKMREGIHYEVDHKKRTIGVLEEGVEFVEDQLGIENLYAPEHSQLVSYLNNALKAKELF TRDKDYIVRNGEVLIVDSFTGRVLAGRRYNEGMHQAIEAKEEVEIKNENQTLATVTLQNY FRLYDKISGMTGTAETEAAELHSIYGLDVVPIPTNKPNQRTDHSDRIYKTQEAKFAAVVD DIEEHVADGQPVLVGTTSVERSEYLSQLLSKRGIKHSVLNAKHHEEEGQIVARAGRPGAV TVATNMAGRGTDIVLGGNPEVILDEKLRERGLDPFEDEEKYQEAWDTEIDQERERSKRLG DEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGETRFYLSMRDELMVRFVGQSMEN MMNRLNVPDDVPIEAKMVSNSIKGAQAQVENQNFEMRKNVLKYDEVLNEQRKVVYATRHD ILEASDIKDNIREMINDTVSAYVAGATATGYVEDWNLDELWNALESLYGPTMTHEELVDG TEYGSAGEISAEQLRDALLSDANSEYDQLEEAVSAIGGESQMRNTERMIILPIIDQKWRE HLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNAMNDAVKEETVRQLFMLRKQFKAQE EASAAGEAEA >gi|227860863|gb|ACLH01000057.1| GENE 72 73008 - 73652 403 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229222868|ref|ZP_04347579.1| SSU ribosomal protein S30P [Nakamurella multipartita DSM 44233] # 16 209 1 209 210 159 43 5e-38 MSQQTNAQVTITGRNVEVPEHFQERVTEKLAKIERLDPTLTFFHVELQHEPNPRRESEAE RLQITATGKGHIARAEAKEDSFYAALETALGKMERSLRKVKVRRENVKSGHRAQKGTGQI AAELVAEAEAAKPAKEERYIDPYAETVEDVRPGQVVRFKEHPATPMSVDDALSEMELVGH DFYLFINEENNKPSVVYRRHAFDYGLISLTDADA >gi|227860863|gb|ACLH01000057.1| GENE 73 73823 - 74272 265 149 aa, chain - ## HITS:1 COG:no KEGG:cauri_0677 NR:ns ## KEGG: cauri_0677 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 149 28 176 176 227 100.0 1e-58 MKEHGHHAVRAHLGAVFAAGIDYLRARGDIPETGLLVPAPTRVSSARRRGGDPVAALCQA AAARLPGWAVVNALSTAESSADQSELSAVERADNMRTAVLLRPAARELVGKNVMLVDDVI TTGATLRASAARVWAIGGDVAGAIVLADA >gi|227860863|gb|ACLH01000057.1| GENE 74 74525 - 76234 1347 569 aa, chain - ## HITS:1 COG:no KEGG:cauri_0676 NR:ns ## KEGG: cauri_0676 # Name: lpqB # Def: lipoprotein LpqB # Organism: C.aurimucosum # Pathway: not_defined # 1 569 1 569 569 1070 100.0 0 MIPARRSLAVLSCVALTTLVGCSTLPHNTDPQVIGTFEPHERADDAVVEPRTDSEPDLLV RDFYSAVAIPTGNYAAARTFLASEIANSWDPTDTVLVVDSIDLVTSNMEDGALEYSVRGN IIGRLANGGAYVPDNSRLEATVRLRQFNGQWRITDLPTGAVIERTELRNRYRPQSLYFFG TTQRLLVADRRWLYSGKDSIASELVTLLLQGPSSDIAPATSTLIPKDATFLGINDGVYEF SGMSAMSQEERLKFASQLVWTLNNAEITNSVRATIDGSPLVDNMEEMTIDDFAEFNPEVA AQSVPKLYAVNDGSLLEVKGEGSTEVQGMAGQIHDIQSADISDEGMVAAVRKRSEKESQL AMGELGHGLKGSVKGETLARPTFEVGGQVAWTVVDGKHVVRVTRSPATGELSTAEVDTSA LENVEGEISVIRLSLTGARIAMIIDGSIYTGVVARATSGERRIVNIHQVGPELTGSALSV EWQTDGSLLVGTSASNSPVWRIEQDGSSATTLPTGNITAPVVAVASSPSTHYVTDAHALL QLPAGGSERSYWREVEGLQGVRSSPIIAR >gi|227860863|gb|ACLH01000057.1| GENE 75 76231 - 77880 1660 549 aa, chain - ## HITS:1 COG:Cgl0732 KEGG:ns NR:ns ## COG: Cgl0732 COG0642 # Protein_GI_number: 19551982 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 1 498 5 499 499 555 62.0 1e-157 MLVASTVVMIILAYALVSVLTQQLVSQKEDTALQELDRARVAVEQQIDATGTANSTQVRI NSARAALGQMSAQQPDAQAVYEPVIVVENSDGTATTSPEGYRIPDGMRELVGRGQVVQQY ATVDQQSGATYNALMVGTPIESDIPNTQVYLVLSMESEESTMALMRGLLSAAGVVVVVLL VGIAWLATQQVIVPIRSASRIAQRFAAGHLRERMVVNSDDEMGRLASSFNDMADKLSKQI TQLEEYGDLQRQFTSDVSHELRTPLTTVRMAADVIAEDAEEFNPYTKRSAELLIKELDRF EDLLADLLEISRHDAGVADLSTASLDIRSCLDSALSQVEHLAAELGVEVIVHAPEEPVAV ECDSRRVERILRNLLANAIDHSEGNPVTVDIGATEDAVGIAVTDSGVGLKEGQEELVFNR FWRADSSRKRHSGGTGLGLAIAREDAVLHGGTLDAIGYFGIGSRFRLVLPRTPGEAVESE PIALEVPGAPKPVEAEEQSALDVSTELGAPAVKAEPDNGIVWPSEREARGAEAPFNQDIV PDFDEEAQR >gi|227860863|gb|ACLH01000057.1| GENE 76 77974 - 78660 839 228 aa, chain - ## HITS:1 COG:Cgl0731 KEGG:ns NR:ns ## COG: Cgl0731 COG0745 # Protein_GI_number: 19551981 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 224 1 223 226 320 78.0 2e-87 MAPKILVVDDDPAIAEMLTIVLEAEGLEPIAVNDGNEAIPAFREHDPDLILLDLMLPGMN GVDICRAIRTESSVPIVMLTAKTDTVDVVLGLESGADDYITKPFKPKELIARIRARLRRI DGGTGEIIEVGDLLIDVPEHTVTRKGGEEISLTPLEFDLLLEMARKPGQVHTREALLESV WGYRHASDTRLVNVHVQRLRAKIEHDPEDPHIVLTVRGVGYKTGKVAE >gi|227860863|gb|ACLH01000057.1| GENE 77 78662 - 79282 728 206 aa, chain - ## HITS:1 COG:Cgl0730 KEGG:ns NR:ns ## COG: Cgl0730 COG0125 # Protein_GI_number: 19551980 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Corynebacterium glutamicum # 1 204 1 200 203 188 54.0 6e-48 MLISIEGIDGAGKNTITQRLREELACDVEVLSFPRYEDSIHAQLAQEALYGRMGDLTDSV YGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSARVGGELIVDWIYELEF ERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYERDAALQSRTAAAYRRLAEQ QWAGQWIATADADMIIQAVKELVGEQ >gi|227860863|gb|ACLH01000057.1| GENE 78 79327 - 79680 522 117 aa, chain - ## HITS:1 COG:no KEGG:cauri_0672 NR:ns ## KEGG: cauri_0672 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 117 1 117 117 142 100.0 4e-33 MSSWDEDIFADEANVDFLDELADLEDEEIVAAVDDACALAVSGEAQTEEEQRNALAAATI AAIWAGAPFSAGEVVEDYPFIRDLAGSGSENLNENALELIEGVEEDYDLEPFIEALS >gi|227860863|gb|ACLH01000057.1| GENE 79 79664 - 79798 86 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVEIGLDSGCAACPARESALATVDIRTQTPNSPEHKGENNELMG >gi|227860863|gb|ACLH01000057.1| GENE 80 80050 - 81000 463 316 aa, chain + ## HITS:1 COG:no KEGG:cauri_0671 NR:ns ## KEGG: cauri_0671 # Name: not_defined # Def: DNA-directed RNA polymerase II subunit (EC:2.7.7.6) # Organism: C.aurimucosum # Pathway: not_defined # 1 316 1 316 316 322 100.0 2e-86 MTSTPRRIVAFVVAGLLCAVAVGIAVWRMSAPDSVVSKPSAATAASSAPATSSSATHSYT TTASPTSTRSKQSQTQVAAPAEDPYLAPNAVVDRTEPAAPTAVYRPDNVSSLQNQQPQVT PNTQYPQAPLSTAPTAPPSEGSVTTAPESPAPGSPQPSSEPTQPPTTPESPTVVPQESPT EDHHASPQSSGQPQPQPGEPAPPRSEEPSDSPKSFNPRPAGFTHEAPVPDEKQKDPAEPR EAGKKPWEGTAPQGGNGVKAPGRETDTHRSNEAPTPAAPTDDAPVAEEPSAATPTAIAPA ESSPEPTAKPAFTESA >gi|227860863|gb|ACLH01000057.1| GENE 81 81078 - 82307 1460 409 aa, chain - ## HITS:1 COG:Cgl0726 KEGG:ns NR:ns ## COG: Cgl0726 COG1482 # Protein_GI_number: 19551976 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Corynebacterium glutamicum # 1 409 1 394 394 437 59.0 1e-122 MKLLTSAARNYSWGSRTLIPTLLGEPEAHSPVAELWFGAHPADPSTIGEEKLDEIIAADP QGQLGQRVADKYGAGLPFLLKILAAAEPLSLQAHPSKQQAEEGFARENAAGIDLTASNRN YKDDNHKPELIVALTEFYAMAGFRPLAQTRSLFAALECEELAHYEGMLDTDPAAEGDSLR ALFTTWITIPGAKRKELISAVVAAGERLRNTQAGEPWMATVMGTVAKLNEQYPGDIGVLG ALLLNHIILQPGEAIYLDAGQLHAYVSGLGVEIMANSDNVLRGGLTPKFVDVPELVKVLT YEAAKDPRVDLVDASETGNVQGAKAWSYPVPIEEFLLDRVELSGEESVEVDSDGPMILLC TSGSAALSNAEGESLNLSAGHAAWIPASDPAATVRGAGAEGTEVFIARV >gi|227860863|gb|ACLH01000057.1| GENE 82 82317 - 83282 819 321 aa, chain - ## HITS:1 COG:no KEGG:cauri_0669 NR:ns ## KEGG: cauri_0669 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 321 1 321 321 567 100.0 1e-160 MLGPMTSYDPETVGFFDIAHEGAQARVVAASVPELARVLGGLRPRSVVVLAADQVSRAAA YVAVGLGEPAEVPIMVSESLPRFTGALDVVVVAGDSPWAERALHTAARRGATTVLLNEIE DAPEDTIVIDTLPTAEGVSPVRVITAVHAVYAVLSEDPVLVSRRLEDIADAVDRELEALS PRRDSTTNPGRALREFVEGGRVIHSCGPDPYALSEERTRVHLGALVARMAGALWAAHGLG GTVVDAEGLGPILQTDPTDIFYDPFEAEEPLVPLRIVLWGQEEANLPHSFAAASADTSCG ELARALQLITRSYAATAYDVK >gi|227860863|gb|ACLH01000057.1| GENE 83 83300 - 84028 765 242 aa, chain + ## HITS:1 COG:Cgl1952 KEGG:ns NR:ns ## COG: Cgl1952 COG0007 # Protein_GI_number: 19553202 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Corynebacterium glutamicum # 3 242 11 250 250 318 68.0 6e-87 MSIHPVVLVGGGPGAWDLITVRGMRALQDAEVIVADHLGPTAQLDKLCDIDAKELIDVSK IPYRAQVAQERINEILVDNARQGRRVVRLKGGDPYVFGRGFEELTALTAAGIPVEVVPGV TSAVAVPALAGTPVTHRGVVHAFTVVSGHLPPGHPKSLVDWTALAQSGATLSVIMGVKNA AAIAAALIDASLSPHTPVRIIQEGSLDGERAFQCELAELGTTMEENSVAPPAVIVIGEVA GL >gi|227860863|gb|ACLH01000057.1| GENE 84 84038 - 85033 864 331 aa, chain - ## HITS:1 COG:Cgl2751 KEGG:ns NR:ns ## COG: Cgl2751 COG0730 # Protein_GI_number: 19554001 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 1 289 1 291 309 318 63.0 7e-87 MRSLILIAIAGAAAQLVDGGIGMGFGVTSTTILLLAGLGPATASAVVHTSELGTTLVSGI SHWRFGNVHWPTVLKLGVPGGLSAFIGATILSNLSLEAAEPVTSAILLVLGINLVWRFSR PRSSTSQETRQHSTPFLAGLGVVGGFVDASGGGGWGPISTSTLMTVGREQPRRIVGTVNT AEFLVTFGATAGFIVGLWEEIVANAAAVVALLIGGVITAPIAAWLISRINPTLLGGFVGT AIVTLNIPKALGWALAQQQILLLQVAALVLGVALTVWANQRRARSAQGEEGDSTSQQRTG SRVVETTEPTGREGAHAGSSAESEEERVRVD >gi|227860863|gb|ACLH01000057.1| GENE 85 85026 - 85718 581 230 aa, chain - ## HITS:1 COG:Cgl2752 KEGG:ns NR:ns ## COG: Cgl2752 COG2138 # Protein_GI_number: 19554002 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 10 224 4 230 241 124 43.0 1e-28 MTAPTATTALLTLSHGSRHPEAAANVMALTHAAGELAGVLATAAHLEFNDPPLDEAARCL AAQGIREAVVVPLLFTEGYHQRIDVPEALAQASAASGVRLHQARGLGTGEDMARLLAERV PEGTDTVVLYSVGSSDERANAAVADLARRVGELAGCTAKVAYATRGERQPVEPDGNQEVV VPLFVSPGLLLDRLDEEAEHGGREPRQVLPPLGKALAGIVSHRYSEVARA >gi|227860863|gb|ACLH01000057.1| GENE 86 85981 - 87651 1866 556 aa, chain - ## HITS:1 COG:Cgl2756 KEGG:ns NR:ns ## COG: Cgl2756 COG0155 # Protein_GI_number: 19554006 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Corynebacterium glutamicum # 2 555 4 560 561 882 75.0 0 MTTATKRPARAKKPEGQWKIDGTAPLNSDEKIKQADDALAVRQRVIDIYSKQGFCSIPAE DLAPRFKWLGLYTQRNQNLGGEMTSKLSNAELQDEYFMMRVRFDGGRADPAKLRAVGEIS RDYARSTADFTDRQNIQLHWIQIEDVPAIWEKLRSVGLDTLLGCGDVPRVILGSPVAGVA ADEIIDATPAIEEIKNDYLLRDEFHNLPRKFKSAISGNVRQDVTHEIQDVAFVGTEHPEY GPGFDCFVGGGLSTNPMLSQSLGAWIPLERVPEVWAGVARIFRDYGFRRNRNRARLKFLV AQWGIEKFRKVLEEEYLDAPLLDGLPLPVAPGNRDHLGVHRQQDGKFYVGVKPTVGHATG EQLIAIADVAEKFGISRIRTTPMKELLFLDVEEEDIPALSRALDETGLYSQPSEFRRGVI SCTGLEFCKLAHVTTKARAIELVDILEDTLGDLDVPVSIALNGCPNACARSQVSDIGLKG QIVTDADGNRVEGFQVHLGGALGLSPDWGRKLRGHKVVADEVPDYVIRLVNRYKEQREDG EQFRHWVLRADEEDLQ >gi|227860863|gb|ACLH01000057.1| GENE 87 87881 - 88423 784 180 aa, chain + ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 5 180 4 178 457 261 75.0 4e-70 MTQQPLKVAVIGAGPAGIYASDILVKKTGGNVQIDLIEQMPAPFGLIRYGVAPDHPRIKG IINSLHRVLDTEQIRLLSNINVGRDVTVSELEEYYDAIVFATGAVGDLGMQIPGSDLEGI HGAGEFVGFYDGNPRFERSWDLSATDVAVIGVGNVGLDVARILAKTGDELKESTEIPDNV >gi|227860863|gb|ACLH01000057.1| GENE 88 88543 - 89232 974 229 aa, chain + ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 1 228 220 451 457 308 67.0 6e-84 MVDPEDIDYDEASLKAREEAKSCDLVCQTLEGYAIREPKDAPHTLQIHLFEQPVEFIGEN GKVTAVKTERTALNGDGSVSGTGKFTEWPAQAVYLAVGYRSDAIEGVPFNKQKNVINNDG GHVVDLDGEVVPGLYTTGWIKRGPVGLIGNTKSDATETIGMLLADAEAGNLSHSREEDIV ELFESKGLEHLTWEGWKKLDAAERALGEAEGRERKKFVEWEEMVNHSRG >gi|227860863|gb|ACLH01000057.1| GENE 89 89430 - 90797 1726 455 aa, chain - ## HITS:1 COG:Cgl0724 KEGG:ns NR:ns ## COG: Cgl0724 COG1109 # Protein_GI_number: 19551974 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 455 1 458 458 667 74.0 0 MRTREQLNAVIKAYDVRGVVGEDIDENLVRDTGAAYAAILRGEGETTVAVGHDMRPSSPS LAAAFAEGAAAQGLNVIQLGLTSTDELYFAAGHLNCAGAMFTASHNPAKYNGIKLCRAGA VPVGQETGLEQIKDMLIDGTPAFDGEPGTVTEREVLPDYAAFLRGLVPLENSRPLVVAVD AANGMGGHTVPAVFEGLPFDVRDLYFELDGTFPNHEANPLDPKNLVDLQKFTVEQKADIG LAFDGDADRCFVVDEKGQPVPPSAICALVAERYLDKFPGSTVIHNLITSKTVPELIAEKG GKAVRTRVGHSFIKAQMAKEKAVFGGEHSAHYYFQEFWNADSGMLAAMHVLAALGEQDKP LSELMAQYSRYEASGEINSTVDDQKATTQRVLDELADKIESVDELDGVTVQLKGTDAWFN VRASNTEPLLRLNVEAKTAEEVQAIVDEVLAIIRA >gi|227860863|gb|ACLH01000057.1| GENE 90 90865 - 91308 444 147 aa, chain - ## HITS:1 COG:no KEGG:cauri_0662 NR:ns ## KEGG: cauri_0662 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 147 1 147 147 264 100.0 7e-70 MNSSRHCSRPGCGRPAVATLTYAYAQQTAVVGPLSEETDPHAWDLCEKHSARITAPQGWE MVRVDRIELDEDDDLTALAEAVREAGRVTTGLVDDSTAGSGADPIDYSATFDGADPRNSN HPVFRTRRVHDARQRRRAHLTVVPDAE >gi|227860863|gb|ACLH01000057.1| GENE 91 91402 - 91872 373 156 aa, chain + ## HITS:1 COG:no KEGG:cauri_0661 NR:ns ## KEGG: cauri_0661 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 156 1 156 156 281 100.0 7e-75 MSTPRPHIRPARHRHGRGARGPLLPHNTPRYRSSAERFDMAVLEAYAPIHNAFAEQLTGL DLAVDTVPRMRLSVDMTVMPDEVIADGPVPLGRIVPAGVDSDGQPTRARLVIFRMPVEER VHSAQEREELLSTVLTALVANYLNVDPGDIDPRFTW >gi|227860863|gb|ACLH01000057.1| GENE 92 91956 - 92258 354 100 aa, chain - ## HITS:1 COG:no KEGG:cauri_0660 NR:ns ## KEGG: cauri_0660 # Name: whiB2 # Def: WhiB transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 100 1 100 100 182 100.0 3e-45 MDNTTNNGAILRGGAAAEMSLDELFGAVEQEWQDQALCAQTDPEAFFPEKGGSTREAKRI CQACAVRDECLEYALEHDERFGIWGGLSDRERRRLKREIG >gi|227860863|gb|ACLH01000057.1| GENE 93 92739 - 93833 1313 364 aa, chain - ## HITS:1 COG:Cgl0720 KEGG:ns NR:ns ## COG: Cgl0720 COG1208 # Protein_GI_number: 19551970 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Corynebacterium glutamicum # 13 363 11 361 362 556 79.0 1e-158 MTESAPQWGSTADAVILVGGRGTRLRPLTIGTPKPMLPTANYPFLQHLLARIKEAGIEHV VLSTSYKAEVFEEYFGDGSELGLEIEYVVEETALGTGGGIRNVYDKLRQDTVMVFNGDVL SGMDLNGILDTHHSKDADVTMHLLNVADPRAFGCVPTDSEGRVTAFLEKTEDPPTNQINA GCYVFKKDVIETIPAGRVVSVERETFPQLLESGRLVVGHVDNSYWRDMGRPDDFVRGSSD LVRGIAHSPLLVGRTGESVVDESAGIAGGVLLLSGTAVGRGSVIGAGSRLDGTVVFDGAT IEPGAIINNSIIASGAHIGANAHIDNCVIGEGAIIGARCELQGGMRVFPGVSIPDAGVRF SSDA >gi|227860863|gb|ACLH01000057.1| GENE 94 93890 - 94801 508 303 aa, chain - ## HITS:1 COG:Cgl7019 KEGG:ns NR:ns ## COG: Cgl7019 COG1216 # Protein_GI_number: 19551969 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Corynebacterium glutamicum # 22 295 1 278 290 362 63.0 1e-100 MRALALGTLKFIVKNIQKPLAVVTVTFSPGRYLSDFLSSLRLATSLPTLTILADNGSTDG VPEAAAREHADVEFLDTGGNLGYGAGMNAGARFARAKGVDEEFFLIANPDVTFIEGSLDE LIACARRHPDAAAVGPRIVEPDGSNYPSARAVPTLLTGIGHALFGTIWPSNPWSRAYRDD ADMDSERPAGWLSGSCLLVRWEAFEQIGGFDERYFMYLEDVDLGDRFTRAGWRNIFCPTA VITHAKGHSTQAHRGAMLRAHHDSAYRFQADRHPHWYQAPLRAALWLGLRVRGLVLSACR DGS >gi|227860863|gb|ACLH01000057.1| GENE 95 94855 - 96507 1844 550 aa, chain + ## HITS:1 COG:Cgl0718 KEGG:ns NR:ns ## COG: Cgl0718 COG1316 # Protein_GI_number: 19551968 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 8 550 6 518 518 505 55.0 1e-143 MTSPNSPRAARHIQAAPSQSAPTAQRGSTPVKAVLAFLSAVVLVLSGVGYFTVGKLGNDI SSASNLALGNQGGFKDNSLDGAVDILLVGKDSRTDAKGNPLSEQELADLHAGVDEGEENT DTIMVIRIPNDGSRATAVSIPRDTYVHDEDFGNTKINAVFAQHKLAKMEELQQDNAEAEA AGEKAPHTDKEIEKESTEAGRSGLISMVHQLTDVSVDHYAEVGLLGFVLLTDAVGGVDVC LNDAVDDPMSGAKFPAGRQTLQGSEGLSFVRQRYDLPRGDLDRIVRQQAYMASLTSKVLD SGTLTSPGKLNKIADAVERSVVIDDGWDIMGFVTQLAGLAGGNVTFTTIPVTSITGVGDY GESVVTIDTAEVHRFMEDLAKSQEKAEEDEKSEDAATDEGNDNGEKPVAEDLNLHVLNAG NVDGMAGGIGAWLKNVGYAVERTANAQSGLYTESQIVAADANDERALALAEQLGGLPVTA NEELEPDTFIVVATDDYAGPKDDSAQEEEAAAEPDQGGETQQVGTPGDDFGTAEVSPEID AGGDGPRCVN >gi|227860863|gb|ACLH01000057.1| GENE 96 96600 - 97310 831 236 aa, chain + ## HITS:1 COG:no KEGG:cauri_0656 NR:ns ## KEGG: cauri_0656 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 236 1 236 236 414 100.0 1e-114 MELLQHLLSADASAPRLSVYNETDGTRMDFSAQTLENWTSKIANMLLEELDLEPDTGSRI LIDLPVSWQAAVIALGALAAGIPFDVTDGTAATEPHADDITVVFTSPEAYLKAAADAGAG SASTPLVDTVLVTQDPFGRGVVESGGELPLGTIDFGPTVRFYGDHFYGTTTPLPELFPTE LGAERVLSQGWTDSASFQRAVLEPLAAGGSAVIVAGLCSADRLEEIAANEKVTVRS >gi|227860863|gb|ACLH01000057.1| GENE 97 97335 - 98057 861 240 aa, chain + ## HITS:1 COG:SMa1368 KEGG:ns NR:ns ## COG: SMa1368 COG0730 # Protein_GI_number: 16263203 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Sinorhizobium meliloti # 20 237 23 240 241 102 34.0 6e-22 MFGWLYIFIGVLILVGTICQGTIGFGLGTIATPILALIKPELVPTLILLLAFVISTTTML KSRSAVSWDIVAISSIARIPGSLAGAWAIASLSHRGLSLFIGCAVIFAMTLSSLGWSPKH TTTNITVAGATSGFLGTSTSIGGPPMALVLKGYDPARIRGTLSGTFIIGSTISLAILGLN GQITSLQLTAAAAYLPVAILGLIAASYLNRFINATVLNRIVIVVAISAALALIVEGLVAA >gi|227860863|gb|ACLH01000057.1| GENE 98 98146 - 99147 400 333 aa, chain - ## HITS:1 COG:no KEGG:cauri_0654 NR:ns ## KEGG: cauri_0654 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 24 333 1 310 310 582 100.0 1e-164 MAAAQHSAVNRVTLGLNPPGGNDMRHGIVRDLSKGVLATRVRRGEVTRLAKGLYVWGRPE PLELLKLLQEHRPFLKATGTTAAQVLLGETVTFPLKLASVERMPASTFYVHSRVSVESFV TSSGIRILNPLVAMKSVSPEMGIRVFESIYSSKAGRARLDSHREALNVIPVVSQRMLDQA ALFTDSGAEVKVAKGLKRRGLKVECNVVIGHYTWDIVLPELKIAVEINGMKFHSQQESWL RDHWKNNEGALIGWLTLRYTGHCVAHHLDYVIDQIANARNPDFEKRYFKFIGFWHEGVLP PKPKPWEYSEHLGYLPPVPPEPPDFPGPPNCPR >gi|227860863|gb|ACLH01000057.1| GENE 99 99259 - 100140 417 293 aa, chain - ## HITS:1 COG:cynR KEGG:ns NR:ns ## COG: cynR COG0583 # Protein_GI_number: 16128323 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 6 210 8 212 299 79 32.0 7e-15 MVKAKYFLAVAEAGTVTAAAERLGITQPALSRQLRRFEEELDLELFMRAGSSLTLSDAAH ALIPTCRRLLAESARAGQAVEALRAGSIPALRVAATPTTISTLLAPFIEAAGQTIPLLTT TPVTHYDVFDALEGSADVVIATIPPGNDVASLALGTIPVRAWVPPTHPMALECAGSTSVE VRRLLQEKVALPSRRSVSRGVVDSFVGTAGCALGSHAECDDTATLSALARSGRAVALMTE LQPPRLVGFDVVDGEKTLGGVPLVAAWSPGHFAGQEIAQIARRFRSFIEGSLR >gi|227860863|gb|ACLH01000057.1| GENE 100 100270 - 101916 2101 548 aa, chain + ## HITS:1 COG:BMEII0351 KEGG:ns NR:ns ## COG: BMEII0351 COG0028 # Protein_GI_number: 17988696 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Brucella melitensis # 5 546 14 548 564 387 41.0 1e-107 MSHVGAAIAESLAAHNVTRAFLVPGESFLPVLDGLYDSSVKAIVTRHEGGATYMAEAHGK ATGQPGVAMVTRGPGAANAYVGIHTAWQDATPLVLFVGLIPTSDRDRESFQEFDPKAWFG TQAKQVFVLDDPSRASRVVAEAFFQAQQGRPGPVIVGLPEDILHQEYTGTIHPPIPVAEG ALSDDHLDLLSLELSRAERPLIFAGGPRWTPEAAEKITRFAEEHRIPIIQDFRAADRVPF DSPANAGWLGYGRDPRAAQLLEDASLVIEVGAVLGDVPTDGYTLRQSPQARNIAINPDTS LRGHSVALLEHIVASPVAFANTLDRLSIEGKDKRGEWFDNAHANHLDFATLPEPADYRPG KEGTAHMEAILAALHEQLPQDPIYTFGAGNHCIWAQQFLRSQVYPSQFSVRNGSMGYSIP AAVATKLQFPERTVVTIAGDGEYLMNGQELATALQYGAPFLIIVMSNGEFGTIRDHQKKH FPDRVSGTQLVNPDFAAVARGFGAHGELVTDDSQAQEAVARALRAIAEDGVPALINVITD QDHSLPID >gi|227860863|gb|ACLH01000057.1| GENE 101 101929 - 103266 1625 445 aa, chain + ## HITS:1 COG:PM0037 KEGG:ns NR:ns ## COG: PM0037 COG0814 # Protein_GI_number: 15601902 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Pasteurella multocida # 42 444 16 412 413 261 39.0 2e-69 MSSTNTPSTTSTPPTSDLKEGEHIVGDGVVAKQRPAASTASWIITLFGTAVGAGILFLPL NAGGFGFWPLVFATVFILPLVYFSHRTYARIVAGAPKEDHGKDILELVSQYLGKGQGIGF AVLYWITVFSTVLIYGVSITNAVDSFIVNQLGGPSIDRWLLATICVGVMTGGFAIGRKPM IWLAQVLVYPLIIALAITSIYLIPRWDLHSFIHFDDGADGWGQMLKGIFLILPVLVFSFS HMAALSQFAIDMQPQYGEKTEKRVSRTEFYTAILLVVFTMFFVWSCVLALGADGMNEALE QNIPVLSYFANVTGTPFMAYMAPIVVICAIVSSYFGHMLGTEEGTEYLLKNAAPKLAEKV SHRTLLNIIYLIAFVCTTLVAIFNPSIISMISVVSGVFVAFIVYLVPVYMFKKLDVYKNF RNDPWNYFVFGMGLLIMAVTIWDMI >gi|227860863|gb|ACLH01000057.1| GENE 102 103280 - 104320 1200 346 aa, chain + ## HITS:1 COG:Cgl0219 KEGG:ns NR:ns ## COG: Cgl0219 COG0079 # Protein_GI_number: 19551469 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 55 336 2 282 288 266 50.0 4e-71 MLRSDLSSFPEYKVGKDFPNALKLSSNEVPFPPAEDIIAAVADAARTTNRYQQPGCLELT NALCNYLGVPADNIFVSAGSTPILQATILASCQTGDEVIVPWRSFEAYPLYVRMAGAEPI LVPLTEDYHVDLEAVLDALTEKTKLIILCNPNNPTGTVITRGEFRAFMDRVPKDVVVLLD EAYWEYNDAPDTPDSVEEYQRYPNLLGVRTFSKAWGLAGMRVGYAVAGEEIINALRQLSL PLTVTAMAETAAVEVLKRHDELADAVEITKAQRDRVCAELGAEKSYGNFVWLPRADAAEV ETKMLDEGVVIRRYLDEGVRVSITDEAETTQFLEAWRRAGIEPWRG >gi|227860863|gb|ACLH01000057.1| GENE 103 104469 - 105845 1831 458 aa, chain + ## HITS:1 COG:DRA0343 KEGG:ns NR:ns ## COG: DRA0343 COG1012 # Protein_GI_number: 15808002 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Deinococcus radiodurans # 4 452 15 461 477 423 48.0 1e-118 MSGFRVENPATGEVLETFDHATDQEILAAVDGAHEAFLSWRDTPIEERAKLVTRVAELFE ERKDELAEIIATEMGKPVSEGLEEAEFSGAIFAYYADNGPKFAADEEIPVEMDGKGYIQR RPIGALLGIMPWNFPYYQVARFAAPNLMLGNTIVLKHATICPRSALAIQKIMDDAGVPKG VYTNVFATHEQAEKIIEHKELRGVSLTGSERAGAAVGSLAAKSLKKAVLELGGSDPYVIL DTDDVKQAAKDAWETRMYNTGQACNSNKRLIVMEDIYDEFVAELVELAKAMKPGTPQEAS ETVYTPLSSRSAAENLKDQIDRIVAAGATLHVGGELADEKSSYFSPAVLTDVPVGSDVYY EELFGPVATVFKVSSDDEALELANDTQYGLGGCVFSKDVERAEKIAQRLEVGMSNVNTYA AEGAEVPFGGVKNSGYGRELGPYGMDEFVNKRTYFVAN >gi|227860863|gb|ACLH01000057.1| GENE 104 105855 - 106628 827 257 aa, chain + ## HITS:1 COG:SP1862 KEGG:ns NR:ns ## COG: SP1862 COG4922 # Protein_GI_number: 15901690 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 14 257 15 254 254 72 26.0 1e-12 MTSLGNFVLEVHTALFDGHDTSVLDKHFADNFVEHSPLIANDAEGLKKFVADLGEGLKYT NARVIADEANGLVALHGRFDGIEDEPFVGFDIYRVEGDKIVEHWDNLVPLAEPNASGRTQ LDGATEIGDESVTEQNREFVIEFFTRSLIGGDYSGFIDNTRDDQFAQHSPDIADGAQNCV DFLTKLKEDGEGLEYERIHRTVAQGQFVLTHSEGSIAGARHSYCELWRVEDGKLVEMWDA ISEVPSDDEALHNHGIF >gi|227860863|gb|ACLH01000057.1| GENE 105 106840 - 108069 1406 409 aa, chain - ## HITS:1 COG:Cgl0474 KEGG:ns NR:ns ## COG: Cgl0474 COG0814 # Protein_GI_number: 19551724 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Corynebacterium glutamicum # 18 409 24 415 415 480 71.0 1e-135 MSNNISVPQKDESTAEFKPALSFVQGIALIFGTNIGAGVLSIPYAARNGGFLALVIALLI AGTLTTISMLYVAETAMRTKAPLQVSGLAEHYLGQWGRWLVFVAIIVNGIGALIAYAAGS GDLINNIFGLPPLLGTLIFFGFGSWVMYRGLHTTGAAEGAITAGMVIIIAVLCGWTILGP GIKAENLLVLHPFFIVPILNLAVFSFLAQYVVPELVQGMDPAKPQQTARAIVLGMVVTGF TLALVPFAALGLLGMEVTEVVTIAWGEALGPVAYYLANIFALAAMLTSFLAIGFTTMRNV LDIFHWEGVKGQRIVAVALTVVPPLVISIAGLGGFVAALSYAGGFAGAIMSVIPVMLLHA SRKKGDRDPGWNVGGLAHPLIQGTIIVVYVLAFIYSIISILGLVPAGWA >gi|227860863|gb|ACLH01000057.1| GENE 106 108143 - 109471 1951 442 aa, chain - ## HITS:1 COG:Cgl0472 KEGG:ns NR:ns ## COG: Cgl0472 COG0160 # Protein_GI_number: 19551722 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Corynebacterium glutamicum # 1 435 1 435 448 550 68.0 1e-156 MQELQYHIEQSRHLGQQVPGPKSAALDERRKNALPAGMAPSLPGYVVDADGGILADADGN RFIDLASGIAVTSAGASNPAVVAAVQEAVAHFTHTSFTISPYESYVAVAEKLNEVTPGDH PKKTALFNSGAEAVENAVKIARNYTGKRGVVVMDRAFHGRTNLTMAMTAKQSPYKNGFGP FAPEIYRAPMSYPLRDGLSGAEAAKKTITMIEQEVGAANLACVVAEPIQGEGGFVVPAEG YLAAIQKWCNENDVVFIVDEIQAGMMRTGTWFASDHEGIVPDMVTIAKGIASGMPLSAVT GRAEIMDAPQPGGLGGTYTGNPVACAAALATFKEFEEKDFGARAQNLEKVAREELEPILG DERVAEFRGRGAMLALEFVTAEGEPDSELVHKIADAAKAEGVLLLTCGLDHNVIRFLPSL AIPEDLWREALQVVVKQFNEYK >gi|227860863|gb|ACLH01000057.1| GENE 107 109589 - 111034 1184 481 aa, chain + ## HITS:1 COG:Cgl0471 KEGG:ns NR:ns ## COG: Cgl0471 COG2508 # Protein_GI_number: 19551721 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Corynebacterium glutamicum # 3 477 7 493 504 222 34.0 1e-57 MSEISFRWLTNQHSLNLRPLVEGKPAFSTIHASELADPTEFTSPGALMLTLGLVFRDDPE GFEHYAAALAAAGVHGIGFGTGLAFAEVPPALTRACSQHHLTLFEIPRATRFVSITTAVA QEQARLENNAHFTFHRQQERLNHAAVSGIQALIDEASNQLSAAVAVASSSGAVLSQRDAE QLSAASAAVEAAEQTGRGTGTSTSTGATITSTFGSAGRRWAVAARRSEKFDSYSRALIRH LSGLASLLLDHPDGNSHAILGALALDAQLAGVDSPALHAAFHLIASHDLTDVIYVTASTP SRLARIVSEIGKAEPHSFVRPEQDSALLMLPPGTATSHLFKKQSRYLRVSALRGVAWQEL NPALLSSLQSHARSLPLGTVAAFDSAAPTWLAEPGVSEALGARRAATVNRLAEHDAQHNT ELLATLRAFLVGNANLATAAAELGVHRHTVRARLDKVEQLCGVDLANPVTRAELLLLSID S >gi|227860863|gb|ACLH01000057.1| GENE 108 111050 - 112576 1141 508 aa, chain - ## HITS:1 COG:Cgl0471 KEGG:ns NR:ns ## COG: Cgl0471 COG2508 # Protein_GI_number: 19551721 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Corynebacterium glutamicum # 14 502 8 493 504 256 31.0 8e-68 MDTGVAVGLEEGSVSLRWFANQPDLGIEILHDCGRPFSVMHPCELRDPREFVGSGAVILL TGMAFEGKPEELSEYIHRVAEGGVTGVGFGVGLAFAEVPPAMVEAARECDISLFTVARRV PFVSVLARLHDELQRQREEGLELFIAQQGALNDAAIAGLDSLVDKTGRLLGAHCCLVDKD GRVFAQSSHPGLPPVDWAPVIADTRAQNFYAARRVGGWNVLAQRLADHGARSFGLLAVAR ESFGVNERALLKQAAGLAELTVKRPQELRRTQNELNSMAMAIQLGMDQPEDPMRRIFHMV GDAQGRVRPVLVKSEGERAHQRFIQALDARLQDHGRLLFEYTLDKSSSLLLFRGSRSMKN LQDLLRDIRGSKRIVVGQPMPWGELGVGAVRELESFAFGLQPGMLAGPESRTLSWTRDPR VKGAVHNRAEETWGKVRAHDAEHGTELAETLEVYLRAGGHVSRTAEELHSHRHTVRKRIA DLEDLLEVDLKDPLVAAELLILGVSVPD >gi|227860863|gb|ACLH01000057.1| GENE 109 112688 - 114013 1762 441 aa, chain + ## HITS:1 COG:Cgl0472 KEGG:ns NR:ns ## COG: Cgl0472 COG0160 # Protein_GI_number: 19551722 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Corynebacterium glutamicum # 1 438 1 438 448 536 65.0 1e-152 MQDLKHRLPQERNVSTAIPGPRSQELNAAREADVAAGVIPGYPSYITDGDGGVLVDVDGN TIVDFASGIAVTSVGASNERVVKAVAEAASHLTHTCFLNAPYQGFVDVCKKLNELTPGTH EKKTCLFSTGAEAVENAIKIARRYTGKNRVVVFDGAFHGRTNLTMTMTAKNKPYKQGFGT LAADIYRAPMSYPLRDGLDGKQAAARTLRYIEQYVGTEELAAVIIEPVQGEGGFVEPAKG FLPALQEWCTDNGVVFIADEIQAGICRTGSWFACDDEGIIPDLITTAKGVGGGIPLSAVT GRAEIMDAPDPGSLGGTYAGNPVACAASLAAFEEMEELDLASRAREIEAIIREELEPLLE LTTVAEVRGRGAMIAIELVDDNNQPNADLTAKVAKTCREQGVLILTCGLDGNVIRLLPPL VINESTLRDGLQVLAEAIRAN >gi|227860863|gb|ACLH01000057.1| GENE 110 114050 - 115498 2365 482 aa, chain + ## HITS:1 COG:PA2097 KEGG:ns NR:ns ## COG: PA2097 COG2072 # Protein_GI_number: 15597293 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 7 481 14 489 491 373 40.0 1e-103 MKIYDCIILGTGYGGLGMGAQLVRDEQKDFLILEAADEVGGVWRDNTYPGAACDTQALIY CYSYFLNLGVSRMFAGQDEMQGYLKALAKEFNLYDHIKFNHRITNAEWKEDLKAWEIEAN GETYYGRVFVGAWGQLSKPKVPNFPNREAFQGVQFHSAEWNHDVDLAGKKVAVIGNAASA VQLVPEVAKVAEKLSVFQRSANYILPRNQVIFTDEELKEFQENPDSYRAIRQEIHEVREE GFDRTRKGTDSAAEGVEQAMEHLRSQVNDPELVEKLTPTFAFGCKRILRSDDFYPTFNRD NVELITAGIEKFTETGIRTDDGAEHDFDVVIYATGFHSQEFQGDLPIAGRDGVDLRERWG NSPEAYLGMTVDGFPNFFMLYGPNTNLNHHSVVAMLEAQDRYISQAVAYLRENPEAALDV KKNVIDEFNTKIQKELEASAFSADCSSWYKNEEGRVINNWSGNVAEYYELTDKLELNDYE LV >gi|227860863|gb|ACLH01000057.1| GENE 111 115512 - 116492 1247 326 aa, chain + ## HITS:1 COG:SSO2521 KEGG:ns NR:ns ## COG: SSO2521 COG0657 # Protein_GI_number: 15899257 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Sulfolobus solfataricus # 70 326 63 308 311 151 34.0 2e-36 MHTLHDDFSGRPVAEDAWKALKPFRDGGAKSFHNFPIPQVRENYVASAHANPLHEEKEPA TTDFQVDQFQVRLYDPRPEAERGQETPAVLYMHGGGWLMGNLETHHSSVRRIAVLTGLPV VAVDYRLAPEHTYPAAIDDCRAAYRWLSNPEAEHGLTVTSIAVAGDSAGGQLAATLANEF VGEEDVAKLSSQILLYPITDCSRERTENGASYKRLEEGFPLASDTMRWFIDTFVTEEAQR TATDLSPLLLEELPEGLPPSLVITVDNDPLADEGIEYAGKLAKAGVDVTHKHLLGYHHGL FTSAGVIDRGEEELAVVAEFIKAAAN >gi|227860863|gb|ACLH01000057.1| GENE 112 116591 - 117901 1931 436 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 1 393 1 391 400 314 47.0 2e-85 MLKRSFGIAMAFIGVLAGASFASGREALQYFVAFGNMGIVGAIVAALAMTISGITILQLG SYHRAKEHTSVFNAVSTPIVSKVLDFATLTCLFCIGFAMFAGAGANLNQQWGWPVWIGAV LMLVLTLLTGLLDVDKVTIAIGAITPFIIVLLTIGTVYTVLTSNPDWSHLNDQAQTIPTT LPNWWVSSINNLGLNVIVVVSMMIVIGGNFLDAKEVGYGGILGGLCFLFLLAVLVGGLYV SVGPITEAEMPTLAMIEQIHPWLGVAMSVAIYGMIYNTSIGMFYAFAKRLTRGKPQHFYK VYVISVLIGFVLSFIGFSNLIGWVYPILGYMGIAIMFIIGFAWLKNRGELQSEADLRRRA RELLKKRFENDNHLSDEEMRELVAIARNSSIPESDFIKEIMTEVDSADLPEDMQIGDGKL HALITGKPIPRSKKKV >gi|227860863|gb|ACLH01000057.1| GENE 113 117966 - 119333 855 455 aa, chain - ## HITS:1 COG:no KEGG:cauri_0639 NR:ns ## KEGG: cauri_0639 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 455 34 488 488 867 99.0 0 MGLCAEGDGDVAGWLVLPQPEGSPRAIQRRLVDAAGVIFLDSEFDEQEVLDSVEGTGALL YGTDGITRQDIRRAVDELLRRQPNLASWRKLSTIGQLSPGLVNPAPESEILARFARFSGD SLLLLTVDGRVIAAAGELPARSIARSLSVVVNHSTTSMHVGRWKVFARWLDIAGESPSFD HGYWLIRGRQTSQDADFDDPAFAALEELLTASLMAQRNILRNHVAESSALMVALCDENSN REEVATTLRRRGFSEHAKMRLIVSDSIKDSYRSDVRDKAFAVAQDAGVPLVLGYVAGRTC VLTTQSGTETKIADVLFGSVGLSDGFDTVEEGPRAWLQALLAAVVVERKHSLHLQSMEFS QCSAIEKAAAYLGQRGLEDAVGQLDRAIGSIKDGEEIFHAYEAEGFSVARAAKVVGVHAN TVRHRLEALAERIRFSDADLVLWALWKALRPRMQR >gi|227860863|gb|ACLH01000057.1| GENE 114 119624 - 121681 2824 685 aa, chain + ## HITS:1 COG:MJ0964 KEGG:ns NR:ns ## COG: MJ0964 COG0145 # Protein_GI_number: 15669154 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Methanococcus jannaschii # 7 677 5 678 680 483 39.0 1e-136 MTETKPFRVSVDVGGTFTDVAIVNTETHELSVAKVPSTPDDPMKAVMNGLKSADVQLNQV EVFSHGTTVATNALIQRRFPPAALITTKGFRDVLEIRDGTKDELWDAYHDVPEPYIRRRD RYEVEERIDFDGAEVTPLDEAEARRIAGILRRKKIETVAICFINSHANASHEERMAEILR EELPDAAISTSSEILPEIFEHDRFSTTVANAVLAPLVSGYVNRLSRQLEEGGYDGDLLLL HSGGGSMTPEMVSRYPVRLAASGIAAGAIAVQDIATRCGYSNAIGLEMGGTSTDIALVYE GDIRITKQWQVEYGFPICFPSIEVGTIGAGGGSEAWIDEAGSLRNGPQSAGADPGPVCYE RGGTEATNTDANVTLGRLGTELIGGALKLNPDAAREAVNKTVADPLGLDTETAAENIVQV ANANMADAVRLLSIRRGYDPRDFVLVVGGGAGALHGAEVARDLSIPTVVVPPHPGVTSAQ GCLLVDIRHDITKMYQAPVDEVDTADLRKEFQALISEARERLHKEHVPEERMKFKLTASM RYRGQWRSLTVEIPESDNPLDDAVAMFHDEHEREYSFADREGAVEFYQIGLIAIGELENP PFKHYDVEEHEAELPETTRPVYFSAHGGWADVPIYHRPDLKAGAKLNGPAIIDQFDATTV IPPGDRAEIDEWSNIRIHIGKATNA >gi|227860863|gb|ACLH01000057.1| GENE 115 121719 - 123734 2458 671 aa, chain + ## HITS:1 COG:mlr9031 KEGG:ns NR:ns ## COG: mlr9031 COG0146 # Protein_GI_number: 13488192 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase B/acetone carboxylase, alpha subunit # Organism: Mesorhizobium loti # 21 603 6 582 585 270 32.0 8e-72 MTTTQTPPQKPSPSSSSRRTLDPVTFEVLKNAFATSVNLMSEQILRTCYSFVIYSRDFSS ALCDAEGNTVMQGDQDIAVHVGTLHFQCQAVLEEFGDDIHEGDVFAINDPYQGGTHMNDV SFLRPIFYEGTLLAFAQNKGHWADAGGSVPGSFDVSATNYYTEGLRITPVRVWSKGVFLK DVAKLLAGNTRSPEIVMGDLKAQAEATAVCEREIHRLVDKYSVDIVRTALREVQDYVEDI VSARVADLEDGEWSTTDYIDLDPAKEEGLVPIKVTMRIKGGRLSYSLDGSAPAVASFLNA GYGSAFSGIVAGTKTFFPDVPLNSGLYRAMDIDLGPEGTVVNAGMPHAVTGFCSGPFEKI MNAVFELWSQLMQERAMACAFNLEYLLIGGWDTRDAKKPQDKGEFFMWYDWMAGGWGGRV DRDGSSATAPVFGPGLAVQPVEGQERLSPVITSHHALVTDSAGPGKFRGGVGVSKGGVLT DANQTVMSYCCDRSRSVTWGIEGGLPSIPQGVWLNRGTPDEKYLGALFSNVPVGPGDTFE RPSAGGGGFGDALERDPQAVLEDVIDGYVSVGRAAKDYGVVIHAIDPEIDEYELDEEETT KLREELRSSRLDKLAEDPESVAERYNAGELDQLDLVRHYGVILDWATGELLPTTTQQYRE QMTKRSSSHWK >gi|227860863|gb|ACLH01000057.1| GENE 116 123769 - 125487 1551 572 aa, chain + ## HITS:1 COG:no KEGG:cauri_0636 NR:ns ## KEGG: cauri_0636 # Name: nifA # Def: Nif-specific regulatory protein # Organism: C.aurimucosum # Pathway: not_defined # 1 572 1 572 572 1067 100.0 0 MSLLGPVLSHLASGTRVPDELREQLAAEELGALRAIEETMRANHTWRVMSTKLLDVSHML NSGRESSDIFQAIVRHARSTIGTDVGYLSLNDEDTGFTKVLATSGVVTEEFRTINMPMGS GVLGIVAATNRPAWTYDHSADPNVTHVDYVDRAVEAEGIRGILGAPIRIAGRTIGALLVG DRHPRHYTHEEIAALEVLGSITSVALENAQVIESQGESVAELTRSQIALSRHVEELQWLN DVNTQLLHVLMNNASFEELERVLAESLDAPVMLWTTEGAPNTPPTSTFPVEFNGRALGTI GVDKELSDAELRVISHASAAFTAIALFAEALVDATARKVDDLVYAVALGNAGREEIARLR HLTGISLNSSVQLYFVGLHSAKSLPTRPQLEHLLPGNAAITHHDQHVCVLYQPDRAIDKA LAPLLSEFSDLTVSAIGFDGLDSARSAHDSAMAYLESALALGVQGRLVTEDTLGTVGLIL GADPQALSALSTRTIGPLVRYDAEHSTELTDTAHHYLLSGHSIPQTARAMFIHPNTVRQR LDRIAELMGDEWAVGQRGLDVFVALRAHALSR >gi|227860863|gb|ACLH01000057.1| GENE 117 125606 - 126724 1519 372 aa, chain + ## HITS:1 COG:MT0171 KEGG:ns NR:ns ## COG: MT0171 COG1062 # Protein_GI_number: 15839541 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Mycobacterium tuberculosis CDC1551 # 2 371 10 379 383 351 56.0 2e-96 MSDTITIRGAVLERSGDERPYADSKPITVSELELTAPGEGEILVKITAAGLCHSDLSVVN NNRPRPLPMLLGHESAGIVEEIGPGVTNVKVGDHVVMTFLPRCGECAGCKTDGKMPCEVG SKTNNEGTLIRGTRHLTRNGETVQHHLGVSGFATHAVVSELSVVPVGSDVPADIAAILGC AILTGGGAVLNEIDPKPEDSIAVVGLGGVGMAAIITAAALGVKEIVGIDMQKDKCEKALE IGATSAMTPQEAEESGKKFTAVVEAAGHPKALETAYKVTAPGGLTVTVGLPAPGSTITID PLVMTGEARRVHGCYLGSSVPSKDIPKYEQLWREGKLNAEALISDHIKLEDINTAMDRLS DGAALRQIIEFD >gi|227860863|gb|ACLH01000057.1| GENE 118 126826 - 128340 1725 504 aa, chain + ## HITS:1 COG:no KEGG:cauri_0634 NR:ns ## KEGG: cauri_0634 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 13 504 13 504 504 960 100.0 0 MAETTEATEPEEQGIGQASPHWKMGPFDVRLPFVHYRMEWPDFAQGLFMCVVDLGAIPLM TEALGMPYEAALAVVMLNGLLYLTHHLLGDPVVPGWITPAIPLLTVYIQTFPEGEERIWA LISFQLMLGIFSLTLGITGWASKVVRLIPSGLRAGIVLGAGIAAIISVFQEDGRFHSFPI TITIAVAVAFFLMYSRGFQALRQKAAGWRFLASLGILPAIFVAVFVAPLAGEAKWPDVEW GFSKPDFMTLWSEYTVFGIGLPPAHMFLTAIPTVLAAYIVVFGDVLQANAVLKEADHVRT DEAVVYSPSRAHLLFGGRNMLMSIIGPDVAMCGPLWAAMHVVIVERYKQGKRAMRTIFGG AGSFRWGTNVGLLLLPITSFVEPILPVGLALTLIIQGFVSVRVGIMESKNQKDLGIAGVT AGVLATQGAAWGFAAGIIMVLVVYGKDMFKDERDGTIRNFDEIDPKEGFADAQADFTELA ELNDLDADGRPIDPNAPKPKDTKS >gi|227860863|gb|ACLH01000057.1| GENE 119 128337 - 129518 1177 393 aa, chain - ## HITS:1 COG:MT0410 KEGG:ns NR:ns ## COG: MT0410 COG1960 # Protein_GI_number: 15839783 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 3 392 14 395 396 426 56.0 1e-119 MTDLLGIDALLSEEEKATRNRVAALVDEHIRPYVGQWYEDAVLPESIFPVLAEAGLFGMH LEGYGCAGRSAVEYGLAMQELEAGDSGIRTVVSVQGSLAMSAIYKHGSEEQKQQWLPQMA AGEIIGCFGLTEPTAGSDPAGMATMARYRSGEWVLDGAKRWIGLASVAGVAIIWAKVSEE DAATAGVEAGVRGFIVPTSTPGFKATPITRKLSMRASIQCDIELEGVAVPGDALLPKHPG LKGPFMCLNEARFGISFGALGAARDSLEVALEYAKERKQFDRSLASFQLTQQKLVDMAVE LNKGQLLALNLGRAKDAGTLEPYQISVGKLANCRTAIEICRQARTILGGNGITADFSPLR HAANLESVRTYEGTDEIHTLILGRVLTGEQAFS >gi|227860863|gb|ACLH01000057.1| GENE 120 129606 - 130016 454 136 aa, chain + ## HITS:1 COG:MA1423 KEGG:ns NR:ns ## COG: MA1423 COG0824 # Protein_GI_number: 20090283 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Methanosarcina acetivorans str.C2A # 10 133 4 129 151 64 29.0 4e-11 MRAPDNAIPITLALRWSDQDANAHVNNATVVTLLEEARVRAAATLTGPVATDSYAHVVRS LEVQYDAELTYADSIEARVWISRIGTTSYQVAHELIQDGTSCVFATATLVLIDVSARRPI ALPDDLRDRLRTHFSE >gi|227860863|gb|ACLH01000057.1| GENE 121 130092 - 131063 1137 323 aa, chain + ## HITS:1 COG:CC2990 KEGG:ns NR:ns ## COG: CC2990 COG2070 # Protein_GI_number: 16127220 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Caulobacter vibrioides # 2 314 3 316 325 386 62.0 1e-107 MISTRVTEMLGITHPIIQGGMQWVGRAELAAAVSNAGGLGVITALTQPTPEDLRHEIRRT RELTDKPFGVNLTMLPAITPPPYAEYRDVIIEEGVKTAETAGNNPKEHMPAFKDAGITVI HKCTSVRHALSAQKVGVDIVSIDGFECAGHPGEDDIPGLVLIPAAADQLDIPIIASGGFA DGRGLAAALALGAEGINMGTRFVASTEAPVHENVKQAIVERSELDTQLILRELRNSTRVA KNAVSDEVAERLAQGAEFGDIRHLVAGKRGRAVYETGDLDAGVWTCGTSQGLIHDVAPCS EIVSRISADAARIISSLTELVKD >gi|227860863|gb|ACLH01000057.1| GENE 122 131067 - 131879 888 270 aa, chain + ## HITS:1 COG:SMb21633 KEGG:ns NR:ns ## COG: SMb21633 COG1024 # Protein_GI_number: 16265300 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Sinorhizobium meliloti # 2 265 4 260 263 110 34.0 3e-24 MTDAILIHREGSALIAQINNSARRNAIAKEHCEALSAALADASSDPAIRALIITGDETAF CAGADIVAAAQAAAAAQAAGEAPNPAESTMLPQLNALVTEIQAAEIPVIAAVEGAAAGAG ASLAFACDLIVAGGESYFTLPFGKIGLIPDGGVSLTALASVGRHRALALALLQDKLGVAE AEAARLVAKSAPRGQALAAALQLVQRLHIAPRDALAKAKEAINRTALGQLEQQLSWEEPT QYAQMDSAGHKEGVMAFLEKRPARFNKQEL >gi|227860863|gb|ACLH01000057.1| GENE 123 132102 - 132482 445 126 aa, chain + ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 8 122 6 121 122 98 42.0 4e-21 MNTAVLDLHACATDRAMELPGAALTHPFGPDWDVFKVRGKVFLLLTAVTGKHQAILKAEP LDAEALRSEHSFITPGYHMNKRHWVSVHPDPQLTSELLAELVTDSYRLVVEKLPRSQRPI DPSTFG >gi|227860863|gb|ACLH01000057.1| GENE 124 132538 - 132984 437 148 aa, chain + ## HITS:1 COG:no KEGG:cauri_0628 NR:ns ## KEGG: cauri_0628 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 253 100.0 2e-66 MTDFDLIDETIAEYRRFERARARFDTEARREYGITGSHLSLLRLIDKKSPIPILQLRKEL GWQPATIGQAVKRLVRDELISIDDDPEDLRRRLCSITEEGRRFLLHVPLTGPARLRTYEF SEEELTTMKRGFETALKAFGYVPWSDED >gi|227860863|gb|ACLH01000057.1| GENE 125 133006 - 134241 1345 411 aa, chain - ## HITS:1 COG:mll1631 KEGG:ns NR:ns ## COG: mll1631 COG0624 # Protein_GI_number: 13471608 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mesorhizobium loti # 16 398 22 406 416 217 35.0 4e-56 MRATTNEQFLADFQAMSANGATPGGGVERQAASAGDNLNRAWFHEVLESLGARVIYDEIG NQYGLFELVPGAEYVGLGSHLDSQPLAGRFDGAYGVLAAAHAAGRVAQSGVKARYNLAVI NWFNEEGSRFAPSMMGSSVFVGTLALDRAHSATDLSGVTVAQAQEEAGWSPRGEAPKLAA YAEIHVEQGKELEAAGNTIGLVTATWGAKKFQAVVSGEQGHTGSTLMADRKDALFGASLI IASVERLTHEFDEGQLQASVSQLTLEPNSPVTIAREVRFNVDVRSPSTEVLDKAQARLQE IIAEAEEESRTSVELSPTHEWALNPYPEAGVELAREVVEELGYPHQEIYTVAGHDSTNLK EVVPTVMLFIPSVDGISHNEKEFTTEEDCVAGLDVLTHVAQRLVENGCGED >gi|227860863|gb|ACLH01000057.1| GENE 126 134251 - 135843 1605 530 aa, chain - ## HITS:1 COG:SMa0101 KEGG:ns NR:ns ## COG: SMa0101 COG1574 # Protein_GI_number: 16262503 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Sinorhizobium meliloti # 19 506 24 514 541 190 32.0 7e-48 MITRIDNAHILTQDPARPVTDAVAFANGRILAVGQAARDLPADQVCDAGGRTLSPGFNDV HSHTVWFGQTLLEVDLSQATTPEDVYSALHEAEPNPDGWVVAAGFRPSGLDAPVEIEQLD RVTGGAPLLIKHNSGHAYTVNTAALRAAGVDPANPPEVEGGEFVRDADGHCTGLLDENAM RAIQEVTLPESGEEIARALELATRRYLERGLTSVTDAGVAGGWIGHSPREIAAYQNATLH TRMQVMVTMDVLHEISGHASDGPGWGLDGGLRTGFGDEWLQVGPVKIFSDGSLLGTTAAL TENYACCSHHGYFQGDPEQMRTRALQAANSGWSLAIHAIGDAAVDFAIETLEEAIDKHGV PAMPHRIEHGGVVRLDQIERLRGKPIVVVPQPLFIQAFGDAMADALGPERTAWSYPGKRL LDASLILPGSSDQPVAPGVPLEVMQAFVERRTASGRDYGPKDRLTPAEALYAYTAGSAAA TGWAGHKGQVMPGQLADFVLLTQDPLNTDDLSTIDVAATIVGGELRYGSL >gi|227860863|gb|ACLH01000057.1| GENE 127 135985 - 137124 635 379 aa, chain + ## HITS:1 COG:no KEGG:cauri_0625 NR:ns ## KEGG: cauri_0625 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 379 1 379 379 686 100.0 0 MHEQRWHDIVAEVQGTIPRLVEDFLTAFSRSGRYGDSLVSADELRLTAFEVLARISDVLV GAMDEEELRAHAQSLGRRRAHQGVELATLIDAIQLDFTVLWEHLRRAAGADQEVLIDHVT QLHSVVTMYNLVVRDAYRLEEARGQHDVHRAHARHLERLFAAESLGTLGIAEITRALNLD ADCHFDVVVAHPTAAVELRALLHEPISSGKAFGHGVRGMFVAFWPSEQCPISHSAGRRTK ELADISGVLFRNVTGLAGARAAAHQAPHIFDATGPLNQLTEAPDALWAVAGDALADFTAS GMTELTQTIAELRLHHAPLYLTITTYLDCGSIKDSAEALHCHRNTVLNRLRHVNELTGLD ITRPKDAARALLALHRTAR >gi|227860863|gb|ACLH01000057.1| GENE 128 137263 - 138615 1275 450 aa, chain + ## HITS:1 COG:STM0212 KEGG:ns NR:ns ## COG: STM0212 COG0477 # Protein_GI_number: 16763602 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 27 434 11 421 433 246 36.0 9e-65 MTTHAAPAASAQSGAEEIKVDSKDVFRIASSAFVGTALEWYDFFLFGTAAALVFNELFFS GMSGTGATLASFATFGVGFLARPLGAVIFGQIGDKMGRRPALIISIVVIGVATGVIGLLP TFDSIGIWAPITLVILRLLQGVAVGGEWGGATTMAIEHAPAEKRGRYAAFVQIGSPAGTL LSSGAFALVLMLDDDAVSSWGWRVPFLIAFPFLAVALWTRSKAEESPVYKALEEEAEADE AAHQGSLKELFTQHSPQLCLASAAAFLGIGGFFVMSTYVLSYATTTLDFERQTVVNATLL GAVCQIFINIIFGRLGEKIGPGRVIGYGALATAIMAWPLWAMIDTGNAVLLTLAVCIGLS LVTITYSVSGVLLSEIFPANVRYSGVAISANIASAVSGLLPFLATALNASNDTPSSTPGI IILAATALITAFGGFAGERHRREDDVTIVD >gi|227860863|gb|ACLH01000057.1| GENE 129 138716 - 139048 262 110 aa, chain + ## HITS:1 COG:mlr2295 KEGG:ns NR:ns ## COG: mlr2295 COG1230 # Protein_GI_number: 13472104 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Mesorhizobium loti # 12 103 95 188 193 63 48.0 7e-11 MAIWKIVTGTVPEPLTLSGTAVAAVLINLLCAVLLLQLRHGSALTRGAWLAARNDVAANI LILGAGLLMLAWASPWPDIVVGLIIGTINLRAAAEVFEQARSEDPEIEEE >gi|227860863|gb|ACLH01000057.1| GENE 130 139459 - 140841 2217 460 aa, chain + ## HITS:1 COG:no KEGG:cauri_0622 NR:ns ## KEGG: cauri_0622 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 460 1 460 460 805 100.0 0 MTKRRRTAGLIAGLAIAGTALIAPAASAATQTESYPETPAVNAKLPIVHTSHGSDHMKAN VLNPRPVCNPWEDHRTVVYKVTDNFMPAGTISTTNQTKKDIPLQQDLSKSQSITLSVNGD RTETTSMNAGGKGSGKNSEGSFGLSHEIATKLGASASYSLSWEAGQSIGPYDVPPNHTGE ATYGFRVLNMTGTQQYCKPNGTWSTPTFWSAMQPMKNEVRVKLYDDIADSYAPNKDAQNT TDVNDPKVVEEEKSPEADAEVIKDNEVAPEEKAVSEAEGKKEEEADKKVQEDLDNGKTDE AKQKLDLKPVLTTSGAKHAGFAGTVALRLENVGTERYYGDFPAVQYRVDVKTAEGPKGVD RLITPRSSNGAHIRDLGFDEKTSTRSFEVTLANPINAGESARVANLDFGDGNTKEGRLKN YIEVTQISRLKGDNSTDNDQNVDSREITVKDTGKKAEGLF >gi|227860863|gb|ACLH01000057.1| GENE 131 141027 - 142184 774 385 aa, chain + ## HITS:1 COG:Cgl0342 KEGG:ns NR:ns ## COG: Cgl0342 COG0627 # Protein_GI_number: 19551592 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 92 382 56 361 365 103 28.0 7e-22 MHFSRTALAGLLSVGLILSPTHAQPAHAQAPDAMSSDIANIDQHSSALDPIALGPLAPVL FADNIFAAWGRLLQQVRIPTVAPEATRPPATTAPAQLRELRHIQDNVWELKAYSPAMDRV ITNDIILPLGGLENTQPRPTYYLLGGAGGGEDALWWDGGGASEFFRDKHVNVVSPRGAYG SMMSDWAQPHDTHGKYKWATYLTKELPQLIDAKFHGNGRDGIAGVSNSGGPALELATFDP RFKVAGSFSGCPSTTGILAQSFAWVSAAFYGTDPARSFGAPWDPAWAQHSPVLNLDHQKG RKTFVIVSRGGPADFDIDIEDSPLPALGLNERLDYWCSAYYAKRATAAGVDLDYYELPAG RHTWGLFRRELAISWATVGPALGVN >gi|227860863|gb|ACLH01000057.1| GENE 132 142260 - 142731 543 157 aa, chain + ## HITS:1 COG:Cgl2846 KEGG:ns NR:ns ## COG: Cgl2846 COG2610 # Protein_GI_number: 19554096 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Corynebacterium glutamicum # 5 157 2 154 463 181 76.0 5e-46 MNVTDTWEPTLGTGPLLGIAVAAIAVILVLVIHFKVHAFVTLVTVSALTALAAGIPLDGV VPTMTSGFGSTLGSVALLVGLGAMIGRLAETSGGAKTLADALVKLFGEAKAPLALGVASL IMGFPIFFDAGLMVMLPVIFAVARRLDGPVLAYGIPA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:37:39 2011 Seq name: gi|227860862|gb|ACLH01000058.1| Corynebacterium aurimucosum ATCC 700975 contig00126, whole genome shotgun sequence Length of sequence - 2597 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 910 678 ## COG2610 H+/gluconate symporter and related permeases + Term 952 - 997 1.5 2 2 Op 1 . - CDS 911 - 1402 459 ## COG3265 Gluconate kinase 3 2 Op 2 . - CDS 1478 - 1864 470 ## cauri_0618 putative secreted protein 4 2 Op 3 . - CDS 1918 - 2595 218 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) Predicted protein(s) >gi|227860862|gb|ACLH01000058.1| GENE 1 2 - 910 678 302 aa, chain + ## HITS:1 COG:Cgl2846 KEGG:ns NR:ns ## COG: Cgl2846 COG2610 # Protein_GI_number: 19554096 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Corynebacterium glutamicum # 1 301 163 462 463 282 60.0 5e-76 VFVPPHPGPVAAGEFFSANIGLILIFGLLIALPTWYLSGYRFGLHLGKKYPYRLEEAITG ALVSDAELPDRPASPASVISILLIPMVLIFGNTGLTTLGTAGVVDPSAAWVRFFIFLGQT PIALIITTLAAMAVLGLRRGEGKSAIEKTMESSLGPICSVILITGAGGMFGGVLRTSGIG DALADSMSGLGVPVILACYLIAVALRLAQGSATVALTTAAALMAPAVEAGGFSEIQLVLI TLATAAGSVFGSHVNDSGFWLVGRLMGMDVSTTLRTWTVNQALISSIGFGIVLIFYGAAA LF >gi|227860862|gb|ACLH01000058.1| GENE 2 911 - 1402 459 163 aa, chain - ## HITS:1 COG:Cgl2434 KEGG:ns NR:ns ## COG: Cgl2434 COG3265 # Protein_GI_number: 19553684 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Corynebacterium glutamicum # 4 163 8 166 167 185 56.0 2e-47 MRKHVVIMGVSSCGKSTVGELLAQHTGLPFRDGDDMHPAANIEKMASGQALDDDDRKPWL ESIGRFLADQEDGAIVGCSALKHSYRELIRAAAPDTVFVHLHGSYELLKERMSKRSGHFM PVSLLDSQFETLEELRPEEAGVVLDVSATPEELAAAAAQYLES >gi|227860862|gb|ACLH01000058.1| GENE 3 1478 - 1864 470 128 aa, chain - ## HITS:1 COG:no KEGG:cauri_0618 NR:ns ## KEGG: cauri_0618 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 128 1 128 128 228 100.0 5e-59 MKKFPLLAATAALFITTLSVPAANAELTQTERDQFRTDPVGAVAWQAIKGSSEYVRADGN TMMAASFFSMTQPGQSIGLPALQNCAERVGSSSPAGGVRYVAAALCATFDPQSRGEVQRG DFGYGPLG >gi|227860862|gb|ACLH01000058.1| GENE 4 1918 - 2595 218 225 aa, chain - ## HITS:1 COG:Rv2458 KEGG:ns NR:ns ## COG: Rv2458 COG2040 # Protein_GI_number: 15609595 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Mycobacterium tuberculosis H37Rv # 4 225 78 296 302 129 38.0 4e-30 VLGEDAEALLRRSVAVAREAVRVAVDKHTAHGDLLVAASIGPYGAGPGKGTDYDGAYDLR RGELQRWHARRIAVLADTDADFLLAETIPNVDEAAALLELLKAQPKPFALSITGAIAADQ AKLSQVIELANQSSRLGALGVNCVSPSQARAVVATLRAGTDKPLLACPNSGEVWDCTAHD WQPAPADAMSLPEAALQLRAAGVSVLGGCCRVGPAEIRQLRRAIS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:38:03 2011 Seq name: gi|227860861|gb|ACLH01000059.1| Corynebacterium aurimucosum ATCC 700975 contig00127, whole genome shotgun sequence Length of sequence - 69795 bp Number of predicted genes - 73, with homology - 70 Number of transcription units - 40, operones - 20 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 210 112 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) - Prom 285 - 344 2.1 2 2 Op 1 16/0.000 + CDS 488 - 1684 1498 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 3 2 Op 2 14/0.000 + CDS 1688 - 2560 958 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 4 2 Op 3 . + CDS 2627 - 3505 1046 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 5 2 Op 4 . + CDS 3570 - 4469 1394 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Term 4502 - 4551 11.4 - Term 4908 - 4955 1.1 6 3 Tu 1 . - CDS 4977 - 6509 1040 ## COG0591 Na+/proline symporter - Prom 6584 - 6643 4.0 + Prom 6543 - 6602 2.6 7 4 Tu 1 . + CDS 6750 - 7466 313 ## COG2186 Transcriptional regulators - Term 7403 - 7431 -0.0 8 5 Op 1 5/0.000 - CDS 7476 - 8186 99 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 9 5 Op 2 4/0.077 - CDS 8228 - 9169 210 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 10 5 Op 3 . - CDS 9201 - 10145 743 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 10183 - 10242 3.3 + Prom 10142 - 10201 1.9 11 6 Tu 1 . + CDS 10420 - 12282 1231 ## COG3472 Uncharacterized conserved protein 12 7 Tu 1 . + CDS 12388 - 12909 231 ## PROTEIN SUPPORTED gi|226867588|ref|ZP_03817223.1| acetyltransferase, ribosomal protein N-acetylase + Term 12966 - 13005 -0.2 13 8 Tu 1 . - CDS 12906 - 13373 383 ## COG4405 Uncharacterized protein conserved in bacteria - Term 13638 - 13673 0.1 14 9 Tu 1 . - CDS 13822 - 14022 107 ## 15 10 Tu 1 . + CDS 14006 - 14884 443 ## cauri_0605 hypothetical protein 16 11 Tu 1 . - CDS 14991 - 15098 64 ## - Prom 15173 - 15232 2.4 + Prom 15150 - 15209 2.5 17 12 Op 1 . + CDS 15295 - 16542 571 ## PROTEIN SUPPORTED gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 18 12 Op 2 . + CDS 16553 - 17869 1336 ## COG0814 Amino acid permeases + Prom 17980 - 18039 4.8 19 13 Op 1 . + CDS 18092 - 19366 1834 ## cauri_0602 putative secreted protein 20 13 Op 2 . + CDS 19403 - 19975 908 ## cauri_0601 putative secreted protein 21 13 Op 3 . + CDS 19979 - 20560 656 ## cauri_0600 putative secreted protein + Term 20767 - 20799 -0.4 22 14 Op 1 . + CDS 21317 - 21967 237 ## COG1373 Predicted ATPase (AAA+ superfamily) 23 14 Op 2 . + CDS 22024 - 22371 302 ## COG4898 Uncharacterized protein conserved in bacteria + Term 22550 - 22597 1.9 24 15 Op 1 . - CDS 22407 - 22688 259 ## gi|262183712|ref|ZP_06043133.1| hypothetical protein CaurA7_06963 25 15 Op 2 . - CDS 22642 - 23046 230 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 23270 - 23329 1.9 26 16 Op 1 . + CDS 23730 - 23930 156 ## 27 16 Op 2 . + CDS 23906 - 24463 251 ## HMPREF0675_3325 hypothetical protein 28 16 Op 3 . + CDS 24372 - 24707 223 ## cauri_0596 hypothetical protein 29 17 Op 1 . + CDS 25153 - 25779 477 ## cauri_0595 hypothetical protein 30 17 Op 2 . + CDS 26067 - 26828 1111 ## cauri_0594 hypothetical protein + Term 26848 - 26896 10.2 + Prom 27097 - 27156 4.6 31 18 Tu 1 . + CDS 27237 - 27602 444 ## cauri_0593 hypothetical protein + Term 27674 - 27715 8.6 + Prom 27717 - 27776 2.6 32 19 Op 1 8/0.000 + CDS 27826 - 28587 843 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 33 19 Op 2 . + CDS 28587 - 30134 1392 ## COG1984 Allophanate hydrolase subunit 2 34 19 Op 3 . + CDS 30159 - 31958 2105 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 35 19 Op 4 . + CDS 31981 - 32580 746 ## COG1802 Transcriptional regulators - Term 32717 - 32758 9.9 36 20 Op 1 . - CDS 32834 - 33613 887 ## COG4336 Uncharacterized conserved protein 37 20 Op 2 . - CDS 33604 - 34857 1526 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 34896 - 34955 3.5 + Prom 34978 - 35037 3.6 38 21 Op 1 6/0.000 + CDS 35076 - 35510 429 ## COG0183 Acetyl-CoA acetyltransferase 39 21 Op 2 20/0.000 + CDS 35480 - 36235 1036 ## COG0183 Acetyl-CoA acetyltransferase 40 21 Op 3 . + CDS 36236 - 38422 2365 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 38500 - 38537 5.9 41 22 Tu 1 . - CDS 38724 - 39305 199 ## cauri_0584 hypothetical protein - Term 39871 - 39923 9.1 42 23 Tu 1 . - CDS 40061 - 41302 1404 ## COG1960 Acyl-CoA dehydrogenases + Prom 41375 - 41434 2.0 43 24 Tu 1 . + CDS 41462 - 42019 651 ## COG1309 Transcriptional regulator 44 25 Op 1 . - CDS 42028 - 43077 1225 ## cauri_0581 hypothetical protein 45 25 Op 2 . - CDS 43070 - 43636 467 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 43552 - 43611 2.6 46 26 Op 1 . + CDS 43660 - 44700 840 ## COG0328 Ribonuclease HI 47 26 Op 2 . + CDS 44739 - 45212 611 ## cauri_0578 hypothetical protein 48 27 Tu 1 . - CDS 45209 - 45739 450 ## COG1434 Uncharacterized conserved protein 49 28 Tu 1 . + CDS 45714 - 46607 865 ## COG0524 Sugar kinases, ribokinase family + Term 46617 - 46658 1.9 50 29 Op 1 29/0.000 - CDS 46608 - 47108 699 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 51 29 Op 2 . - CDS 47134 - 48357 1228 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 52 30 Tu 1 . + CDS 48381 - 49100 943 ## COG3527 Alpha-acetolactate decarboxylase + Term 49117 - 49149 1.1 53 31 Tu 1 . - CDS 49097 - 49549 634 ## cauri_0573 hypothetical protein - Term 49657 - 49692 6.0 54 32 Op 1 . - CDS 49871 - 50761 1037 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 55 32 Op 2 . - CDS 50804 - 51460 450 ## cauri_0571 hypothetical protein 56 33 Op 1 9/0.000 + CDS 51509 - 52498 1378 ## COG3839 ABC-type sugar transport systems, ATPase components + Term 52569 - 52593 -1.0 57 33 Op 2 35/0.000 + CDS 52624 - 53913 1819 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 53931 - 53983 13.0 + Prom 53968 - 54027 3.8 58 34 Op 1 38/0.000 + CDS 54077 - 55054 1132 ## COG1175 ABC-type sugar transport systems, permease components 59 34 Op 2 . + CDS 55051 - 55872 1073 ## COG0395 ABC-type sugar transport system, permease component 60 34 Op 3 . + CDS 55872 - 56057 170 ## cauri_0566 hypothetical protein 61 34 Op 4 . + CDS 56054 - 57556 1874 ## COG0366 Glycosidases + Prom 57578 - 57637 2.2 62 35 Tu 1 . + CDS 57718 - 57981 393 ## cauri_0564 hypothetical protein + Term 57997 - 58038 8.0 63 36 Op 1 1/0.154 + CDS 58219 - 59832 1956 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 64 36 Op 2 . + CDS 59892 - 61223 1814 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 65 36 Op 3 . + CDS 61233 - 61427 370 ## cauri_0561 hypothetical protein 66 36 Op 4 . + CDS 61432 - 62028 708 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 67 36 Op 5 . + CDS 62098 - 62514 651 ## cauri_0559 hypothetical protein + Term 62742 - 62786 10.6 - Term 62728 - 62774 14.2 68 37 Op 1 . - CDS 62817 - 63968 1235 ## cauri_0558 hypothetical protein - Prom 64103 - 64162 2.0 - Term 64099 - 64136 7.1 69 37 Op 2 . - CDS 64165 - 65223 1523 ## cauri_0557 hypothetical protein - Prom 65323 - 65382 3.1 + Prom 65358 - 65417 3.2 70 38 Tu 1 . + CDS 65440 - 66372 766 ## COG2897 Rhodanese-related sulfurtransferase + Term 66390 - 66424 3.0 + Prom 66398 - 66457 6.4 71 39 Tu 1 . + CDS 66514 - 68286 2243 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit + Term 68391 - 68441 1.2 72 40 Op 1 . + CDS 68721 - 69161 89 ## cauri_0554 hypothetical protein 73 40 Op 2 . + CDS 69194 - 69751 707 ## cauri_0553 putative N-acetyltransferase Predicted protein(s) >gi|227860861|gb|ACLH01000059.1| GENE 1 3 - 210 112 69 aa, chain - ## HITS:1 COG:MT2533 KEGG:ns NR:ns ## COG: MT2533 COG2040 # Protein_GI_number: 15841982 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Mycobacterium tuberculosis CDC1551 # 5 67 6 68 302 76 57.0 1e-14 MALFDAPLLLDGGLGTHLEAQGHDISGPLWSARVLRENPTLLESAHADFFAAGAQVATTA SYQVTFDVL >gi|227860861|gb|ACLH01000059.1| GENE 2 488 - 1684 1498 398 aa, chain + ## HITS:1 COG:BS_opuAA KEGG:ns NR:ns ## COG: BS_opuAA COG4175 # Protein_GI_number: 16077367 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Bacillus subtilis # 4 390 10 396 418 359 50.0 5e-99 MAAITAKNLYKVFGKHAKKGVESLKNGSTREELREQGLTAAVIDASFEVEPGEIFVVMGL SGSGKSTLIRMINGLWDATSGEIFIGDQNLAAMSEDELRAVRRDRISMVFQSFALLPHRT VGENAAYGLEIKGVPKQEREAKADEALAMVGLEGWGDSMPDELSGGMQQRVGLARALAAD TDILLMDEAFSALDPLIRKDMQDQLIDLQASLNKTIVFITHDLNEAMRIGDHIAMMRDGR VEQVGTAEEILQNPVNNYVADFVKDVDRSRVLNAENIVERPQNTLNASQGPLTAQKLLRE SQNSWLVVLNADRTPAGVVWEEDIAKAVRTGDSELPLDSTTTHIVHEGQNIAELFGYAAD TTTPLLVVDGNGKFTGVIPRVTLLAAASSDIATTEEEN >gi|227860861|gb|ACLH01000059.1| GENE 3 1688 - 2560 958 290 aa, chain + ## HITS:1 COG:MA2146 KEGG:ns NR:ns ## COG: MA2146 COG4176 # Protein_GI_number: 20090989 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 6 274 3 273 276 233 49.0 3e-61 MDQNALPRIPVGDWVSDGIDWLTDNAAVLFDAFSAIMSFLIDGFSNTLLSVPGMIMLVIL ALLGWFFRSPKFAVGSALGFLLVMCMRQWDTMLETMSLVLIATLSATILAVPLGIWAAKS NTASAIIRPIMDFMQTMPAFVYLIPAVTFFSIGVVPGIFSTIIFALPPGVRMTELGIRQV DSETVEAGKSYGATNWQILKGIQLPLAVPTIMAGINQVIMLSLSMAVIAGMVGADGLGKE VVSAISTLDIAKGVEAGLAVVILAVFLDRLTAALGSLKSYPASILNLVRK >gi|227860861|gb|ACLH01000059.1| GENE 4 2627 - 3505 1046 292 aa, chain + ## HITS:1 COG:AGl1793 KEGG:ns NR:ns ## COG: AGl1793 COG2113 # Protein_GI_number: 15891012 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 288 20 297 304 151 31.0 1e-36 MLKNKIVAAVSVAALACGLASCSSAGEDKTLTLGYMPAWTDTVSGANLLKEQFTEAGYDV ELEELSDAAVFYTALDNGDIDIFPLAWSERTHKKYMDQYGENLEDLGIGYDKAESFFAVP TYMDDVNSISDLKGQADRFGGKIVGIEPGAGLTELSSNTVDAYGLEDEGYTLATSSTPAM LAELENAIDNQEDIVVTLWSPFWANSQYDIKRLEDPEGSMGEPENMHWLARDGFSEQFPD VVDYLGNLTLDQEQYESLENLIVNEYEDGDEDKAVQEWLGTHGDALPKLNDA >gi|227860861|gb|ACLH01000059.1| GENE 5 3570 - 4469 1394 299 aa, chain + ## HITS:1 COG:pli0045 KEGG:ns NR:ns ## COG: pli0045 COG2113 # Protein_GI_number: 18450327 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Listeria innocua # 1 296 1 285 289 147 33.0 2e-35 MFSRKILATVSAVALSASLVACSSDSSDSASDSGNDGDKGTITMGYIPSWTDGLSTAYLL QNKLEEAGYTVEHEQLNDAAVVYTALASGDIDIYPSAWSEFTHKQYMDKYSDKIEDYGAY YGNARLTWAVPEYMDDVNSIEDLKGQADRFGGQIVGIEPGAGLTKASQETIDGYELDGYN LSTSSTPAMLSELKSATDAEEDIVVTLWRPFWANAKFPVNDLEDPKGTLGDTEGLHWLAR DGFEEDNPEVAEWLKGLKLDDEQYGTLEDLVVNEYGEGKEPEAVQDWLDKNPDVVEDIK >gi|227860861|gb|ACLH01000059.1| GENE 6 4977 - 6509 1040 510 aa, chain - ## HITS:1 COG:SA0303 KEGG:ns NR:ns ## COG: SA0303 COG0591 # Protein_GI_number: 15926016 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Staphylococcus aureus N315 # 4 490 6 497 510 513 58.0 1e-145 MQSFGTLNWIVLLLYLLGMLLVGAYFARRAGSDQEEFFKAGGRIPGWAAGFSIYATTLSA ITFMSTPEKAYLTDWAYSAGNLAIFAIVPILIGYYVPFFRKLDVTTAYDYLEERFSVVLR ALGSLLFVLYHVGRIAIVIYLPTLAITSVADINPLVVAVFVGVLCVVYTFLGGMEGVIWS DVIQGILLLAGAAVVVLTAMAMTPDGFSGAVVNAAEEGKFYSADNFTTNAVFTSIPFIFI GNVLNSLHQYTSSQDVVQRYQTTPTIQATKKSLIVNGILALVTIPLFYGMGTALYNFYEA KGGLPEGVNTSAVVPYFILSELPAGIAGLLIAAILAAAQSTISSSLNSISACVVVDIYNR FSAKEASVTLSRCVIIAAGTFGLAVALYLIITNQSDLWDLFLAITGLFGVPLTAVFVLGI FTKSANSHGVLIGLICGAVAAYFAGKLDQGPFLVSIVAFVGTLGIGYMASFIFRKSDQHD ITGLTIYGKDLEYTRRKAVQTPVAQSEQDG >gi|227860861|gb|ACLH01000059.1| GENE 7 6750 - 7466 313 238 aa, chain + ## HITS:1 COG:Cgl2598 KEGG:ns NR:ns ## COG: Cgl2598 COG2186 # Protein_GI_number: 19553848 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 20 234 15 229 240 204 49.0 1e-52 MQTRTWGFSEAEHRPVSTTQQAVEGIKKFIRNNALKPGDSLPTESELCEELGSSRSSVRE AIRILTTLDIVDVRHGTGTFVSGTSLNALVQGLIFRATLDADDNLETLRNVVEIRQAIDL AIGQEIIAKLESSKLEQLSSIVDKMSAKRKQGLNFAEEDREFHQVLLSEIDNPIIRELND TFWQVHMNVIPLRKLEEPQDFSRTVRAHQDIVDALQNNDLKKYQESVLRHYEPLLTSL >gi|227860861|gb|ACLH01000059.1| GENE 8 7476 - 8186 99 236 aa, chain - ## HITS:1 COG:Cgl2596 KEGG:ns NR:ns ## COG: Cgl2596 COG3010 # Protein_GI_number: 19553846 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Corynebacterium glutamicum # 8 236 2 229 232 279 63.0 3e-75 MFRFKSSELAGRREEVRDMIRNSVIVSVQAPDGHPMRDTHTLTHVARACVEGGSRAIRCG GYGGIKDVEAIAAAVDVPVFGLTKEGSEGVYITPTVKSVRQLADAGAAVICADATDRSRP DGSSFCDLVEECHRLNVLSMADCSTPEEMQRAHQAGADIISTTLAGYTESRNKTEGPDLE CLAEGRRLCGKDAFVIGEGRFASRDDVAAGKRAGADAIIIGTAITDPAWITRSFNS >gi|227860861|gb|ACLH01000059.1| GENE 9 8228 - 9169 210 313 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 5 306 6 315 319 85 26 7e-16 MTSTLALDVGATKIGWGFVTDEDPTQAVALGKIPTQSAGVTPQEQIKKAIQLALEESSIT PTRIGIGSPGIIKAPEGLVTYNGDTIKNWAGTNLRAVAKEIVDLPCAVHNDVRVWAYGEL TLGAARDFQSGRVLYLSLGTGVGGAVSDSGRLLTGPTGSAGEFSELLCADFRGFADRAEN IMSGNSLAAYYEEFSTNSASERVQWKERDQLALPLEKVVERMNQGDELASRIIRGNSYGL GRAVAGLVSALDLDAVVLGGGVCQVGAAVEEPFRQAIEDFALKPNRSVAVRITESPATAP LVGAAAFARDNAF >gi|227860861|gb|ACLH01000059.1| GENE 10 9201 - 10145 743 314 aa, chain - ## HITS:1 COG:Cgl2594 KEGG:ns NR:ns ## COG: Cgl2594 COG0329 # Protein_GI_number: 19553844 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Corynebacterium glutamicum # 10 307 8 306 312 357 62.0 2e-98 MTSNTQHLRGVVPPLLTPFNEDYSVDTDTLKRQAERLIKAGVHGLFVLGSSGEVAFLTRE QRKEVIATVVEQAQGRVPVIAGVIDMTTPRVIEHIEDAVSLGVQGLVATAPFYVRTHDVE IAEHFRLLHEAAPETPIYAYNIPVSVHSVLDIATLISLAKEGVLAGVKDSGGNDGYTRAL ISARNKAGVKDFVVLTGSETTVDFAYLAGADGVVPGLGNVDPVSYVKLHELLVDGEYATA AELQSKICDLFTIVGVGDGTRMGGSSQGLGSFKAALHHLGVFPSGLMSRPHVALNDEEQA KIHEIVDAAQVIEP >gi|227860861|gb|ACLH01000059.1| GENE 11 10420 - 12282 1231 620 aa, chain + ## HITS:1 COG:Cgl1252_2 KEGG:ns NR:ns ## COG: Cgl1252_2 COG3472 # Protein_GI_number: 19552502 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 233 593 1 352 369 251 40.0 2e-66 MGFNTNMHQLSALMRSTENGEIQLPDFQRKYKWEDERVRQLLITIFRGHPLGIIMLLETG NSSVRFKPRPIESTEATATSEPKFLLLDGQQRLTSLTQALKGDGVVHTKDSRGKRLDRRY FINIQKSIEDPFELDEAVISVPADGVIRTNFNRDIVLDLSTMEKQHEAGYIPVSLLLDQM GLFEWFGKLGDTELMTAFSDGILRQVNEYKIPAIELDKQTDKAAVATVFEKVNVGGLPLN VFELLTAVFAGDAEYYEKYQHDFRLNDDWAETKELWKEHDVLHKVENTDFLQAITMLTTL DRSKHSSGGRKVGLSAKREDVLKLELNDYLTWRDALRQGFIWVAGFLADLHIYRFRDVPY PKQLVPLAAIAVVLGKEADKHHVKEKITQWFWSGVLGELYGSAIETRFVRDLEGVPAWAM GEETTAPRTVQDATFAESRLHSLRTRNAAAYKGIAALIMAQGSTDWVEGKQFGAFQYRDM AVDIHHIFPKDWCKKNGIDDERRESIVNKTTLSARTNRVIGGVAPSAYLSKVESESGFDA DGVDDVLRGHLISPEVLRSDNFDTFFERRRETLCTLIEGALKKTVQRDVSEGNAAEDSSF FEEEALEEPGQLVEEPVSEV >gi|227860861|gb|ACLH01000059.1| GENE 12 12388 - 12909 231 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226867588|ref|ZP_03817223.1| acetyltransferase, ribosomal protein N-acetylase [Actinosynnema mirum DSM 43827] # 1 157 1 157 176 93 36 3e-18 ITGLPMNHDFALHTPRLSMSVPTDADIDAVFAIHSDARTYEHRPELAMKTREEAVELTRA WQENWREKKLGYYVVSTLDGTTIGFTGVRHSEEAGEEVLNLYYRFAPESQGQGFAKEAAA AAIASARERFPQLPVVAIIDPSNEASIGLAFKLGLQHVPGAGVADDYEVYRLS >gi|227860861|gb|ACLH01000059.1| GENE 13 12906 - 13373 383 155 aa, chain - ## HITS:1 COG:SP0796 KEGG:ns NR:ns ## COG: SP0796 COG4405 # Protein_GI_number: 15900689 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 25 137 31 140 146 59 33.0 2e-09 MTQDALEPLSVLPRGEFAFPGPLRDALVTAILNGTKTTTTSLLAEYPHGYKPQEDVGNLE AVLDSHDNVVCVIRTTEVQVCRLADVNDEHALAEGEGYADASEWRAGHEQFWRSPEFVDY IGEIDINDDTQVVCQCFAVDGRYLVKGLEAWDAET >gi|227860861|gb|ACLH01000059.1| GENE 14 13822 - 14022 107 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPRMDTLRPLSCFPFLGQELDDVTTQAFNKTSCCSVTEREPTALERFVFEGVEKDSFPDA AWSDDE >gi|227860861|gb|ACLH01000059.1| GENE 15 14006 - 14884 443 292 aa, chain + ## HITS:1 COG:no KEGG:cauri_0605 NR:ns ## KEGG: cauri_0605 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 292 82 373 373 574 99.0 1e-162 MSILGIGGGLNRDTRAIAESTYSLCNALKDLLAYKRELDRKARQEPGGVLVTLDEMHHQR SQELIEFGATIQHLVREGEDISVVMAGIPTSIRPLLSGKLNSHGDANPVTFLRRANRIEL GRVSDSDVREALEEPLHSAATSWSQDALKTAVEACHGYPFMIQLVGQCSFREKERISDDG SEISIDSAQRGVATAQRKLSQLVHEPALSALSNVDRSFLVYMAQNDGPTKMSDIKARFNQ IDSYVGNYRRRLLDAEMITTTGHGEVDFALPYMRDYLRAHAASLIVEDFDSQ >gi|227860861|gb|ACLH01000059.1| GENE 16 14991 - 15098 64 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYCGGGVGALLLGLPTPHPSTTATTLAVAETADRQ >gi|227860861|gb|ACLH01000059.1| GENE 17 15295 - 16542 571 415 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP6-BS73] # 1 413 1 409 409 224 35 1e-57 MAASPLGVWSEVGKLHQVMVCAPGLAHERLTPSNCAELLFDDVLWVDEAKKHHAEFVAEL RSYDVEVLEMHKLLEETLDTPGGRDFILDYKLLDRNVGAGIGGELRHWFNEMPTARLAEL LIGGLPFAEIPKGLGHGTIDAMREVYGPSAFALRPLPNTQYARDNSAWIYGGVSLNPMRM PARHQETLLTRAIYNYHPRFAQADFKFWYGNTDEEPGLAALEGGDIMPIGKGIVLVGMGE RTTWQGVSQLAMRLFEEGAATKVIIAAMAKERASMHLDTVLTFLDADKVTAYPKVVDTIR PIVLHPSTSTAPFDVELPTESFLEVVAKALGIGAFEVIETGGDTYAAAREQWDDANNVVA IEPGVVVAYDRNKHTNAKLRAAGVEVVEIGSAELGRGRGGGHCMTCPIVREAVDY >gi|227860861|gb|ACLH01000059.1| GENE 18 16553 - 17869 1336 438 aa, chain + ## HITS:1 COG:YPO1321 KEGG:ns NR:ns ## COG: YPO1321 COG0814 # Protein_GI_number: 16121603 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Yersinia pestis # 7 437 2 428 433 250 35.0 4e-66 MTSPKADTTAQTTDSGDSTQSASTPPKSEGTALSWVLALFGTAMGAGILFLPLQAGAFGF WPLAFATVIVFPLVYFSHRTYARIVAGAPTQDYGLDILELVRKYLGRNTGLFVALMYSLA NIPTVFIYAISVTNAIDSFIVNQLHGPSINRWVLSVLCVGTLTGIFAIGRKPMLWLAQIL VYPLIISLAATSIYLIPQWDFHSFLDVDYKDGSWPNILLGAVLILPVLAFSFSHMAALSQ MSVDMQSTYGKNTEKRVSRIELYTAALLVIFTMFFVWSCVLALGADGMREASEQNIPVLS YFANVTGVHALAVLAPLIVIFAIVTSYFGTMLGAEESTAYMVRLLAPRTANRLNRRTLLT IVYVFIFITGTMVSVFNPPILNLIYLVGGVFDAILIFLLPVYMFHKVKEYKKFRHDPWNY FVFALGSVILGITIWDLF >gi|227860861|gb|ACLH01000059.1| GENE 19 18092 - 19366 1834 424 aa, chain + ## HITS:1 COG:no KEGG:cauri_0602 NR:ns ## KEGG: cauri_0602 # Name: tbp1 # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 424 1 424 424 787 100.0 0 MLIKGLRALAPLAAAAAFITPAAQAADIPPMPQAYPITNLYKSCSASGENITTPEWHFAE TGRRYLSDGTLQFKNTTDQDVPYTASIETGTNHKIEANSKAAMPSGWDTTAKSDIGLKLS NGWHDKETFGPITLKPGESFRVEYGVVEKDFISMFVGCNDDRLENIPGANVIRGKGPAER YAFAYIIKADGSISDLAIEIPSRSPGANSKPVEGNYTSVSGPSLEKIEDPKKDEIMQPTE ELQRDPSWPKEGETCKSGDKSWYPLDITAVKPTFRKPGYSTDFLNWSKGDYEYAPVTDFV VGAEHAPYTNWRGNRGDIPKGWLESVGAVKRAYMPVGTELEHIDLAPGERVRVEYGTTMT RIDYRELHCGKDGKYSLTSNYKQTTAPSGFWAEATITGKDGSTRTEDVTPDEYRELPVPT QTIY >gi|227860861|gb|ACLH01000059.1| GENE 20 19403 - 19975 908 190 aa, chain + ## HITS:1 COG:no KEGG:cauri_0601 NR:ns ## KEGG: cauri_0601 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 190 1 190 190 353 100.0 2e-96 MFKTKIASTTAAVAIACGLITAPAANALPARDLGPANPTTIGEQCSNPGDTGQTVNIKRT YFDGSAGSWTISNYNDEPLPVTRSITETKTKTWNVSAGVDFKLLDLINFTFSSSYTDSQS YEVGEQVGPYNIAPGNTAVLRAGWVVSDFEGQKTICGSDHTWQANGGTFTATLPKERHIE VSTRDNNDWG >gi|227860861|gb|ACLH01000059.1| GENE 21 19979 - 20560 656 193 aa, chain + ## HITS:1 COG:no KEGG:cauri_0600 NR:ns ## KEGG: cauri_0600 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 193 1 193 193 383 100.0 1e-105 MLKKSIASTCAALSLLMATPVAHAADFGGDFELPQRWNDDFQPGTHCSTPGENGTYVTAK RRWFKQTDATSVANRNAEPVPVSHTVTQARTQTIEVSGSIKGEGELAKVLTQTYGFHYVS EQHWKLNQKVGPYTLPANSQGKLVWGFTMLDTDGQDVRCNADQEWEAVGKPYSATVPEAR YSELQLGDAPVWN >gi|227860861|gb|ACLH01000059.1| GENE 22 21317 - 21967 237 216 aa, chain + ## HITS:1 COG:MT3393 KEGG:ns NR:ns ## COG: MT3393 COG1373 # Protein_GI_number: 15842885 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 214 52 265 269 147 35.0 2e-35 MSKDAAELYGIQFPDRLHSLLDKFAEQGTAELVAAHIGRALDIPQRSVPTYVTALSDVFL INQLPSWGTNLEKRAISKPKVFLSDTALATSLAGLEPEALEMNISSTLTGGICEAFVANE LLKQKAWSSIDYRLFHFRTSTGKEVDLVLESRSRDIVGVEVKAAMSIQPKDFAGLRHLQQ VAGDSFRAGIVLYTGKDVLPMGENLWAMPISTLWHG >gi|227860861|gb|ACLH01000059.1| GENE 23 22024 - 22371 302 115 aa, chain + ## HITS:1 COG:SMa0277 KEGG:ns NR:ns ## COG: SMa0277 COG4898 # Protein_GI_number: 16262600 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 3 114 4 115 116 144 58.0 4e-35 MSHRIFSVPFTDIYPHYVKKVERKGRTVSELHEVITWLTGYSVEGLERVREQKITLEDFF EQAPHLTPSRSLITGSICGHRVQDIEDPLMQNIRYMDKLVDELARGKAMEKILRG >gi|227860861|gb|ACLH01000059.1| GENE 24 22407 - 22688 259 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183712|ref|ZP_06043133.1| ## NR: gi|262183712|ref|ZP_06043133.1| hypothetical protein CaurA7_06963 [Corynebacterium aurimucosum ATCC 700975] # 18 93 1 76 76 144 100.0 2e-33 MTSKNAEFNVTWRENKSMPAYLIKYHRPTGALEVTEYESLIEGTRARHRLDQVNKDPDVE IVAIGAKNLESVRHTHARYFFREKTAPPYPFVA >gi|227860861|gb|ACLH01000059.1| GENE 25 22642 - 23046 230 134 aa, chain - ## HITS:1 COG:MT1412 KEGG:ns NR:ns ## COG: MT1412 COG2357 # Protein_GI_number: 15840824 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 64 137 205 273 71 52.0 3e-13 MREEPHSGYRAVHLHVMSEAGRAEIQLRTALQSQWANLYEMAGDLYGREIRYLEFGGKIP AEFEIETRALHELSEVVNRVEKLVDILTEPFEGNQPADTTQREARQLRRSMYKMLDKLIH DFEERRVQRDVEGE >gi|227860861|gb|ACLH01000059.1| GENE 26 23730 - 23930 156 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSLETCASDWAETIAAALEREFPAAMHHTSASTEDCDVRPASCTPVSTVVSTGTPASTC STQARY >gi|227860861|gb|ACLH01000059.1| GENE 27 23906 - 24463 251 185 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0675_3325 NR:ns ## KEGG: HMPREF0675_3325 # Name: not_defined # Def: hypothetical protein # Organism: P.acnes_SK137 # Pathway: not_defined # 1 128 59 197 335 65 33.0 8e-10 MQYSGTLLNEILGPESPKELSALLDDRLSTEALTTEYNYLLAHPGYEIPYGRAWLLQLAV IRPSEAMDKLVELTAQHCRDWLDSLNQPVRHGMHSNTAFNLFLILEAAEKLGLESLASSV REAAARLFWRRPQLPARMGAVWARFPVQRAIGSAAHVARAARLPTLVRRLSSPPRQSFGL SYTNP >gi|227860861|gb|ACLH01000059.1| GENE 28 24372 - 24707 223 111 aa, chain + ## HITS:1 COG:no KEGG:cauri_0596 NR:ns ## KEGG: cauri_0596 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 111 1 111 111 206 100.0 3e-52 MSRVLPDFPHWFDGFLPHRAKALDFLTQIPEVLDPTDGRLSHLYGLALTRAWMLVELAAH FDASVLSRAHTLAVSAHPQLVDGHFMSTHWLITYALRFQLAVEGRPVSELR >gi|227860861|gb|ACLH01000059.1| GENE 29 25153 - 25779 477 208 aa, chain + ## HITS:1 COG:no KEGG:cauri_0595 NR:ns ## KEGG: cauri_0595 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 208 120 327 327 399 99.0 1e-110 MFIGIVAALQLNKEPDAPAPEPTGVVTEPAAAIEPSPAVEMYIPAIDVRTDFEEGSCRIK DNKINPDSMNKACTYTAEDKPYSLPGTDAQDIVVIAGHTGAGVPAVFNNLYDSRADEHKA SLGDKLYLRTQNSGDQWLVYTATDLHDPSKDGLEQDESIWGADAQPGRLLTISCIQPANP LAAAVRNAVVGWQFEGVAETPEAATNQG >gi|227860861|gb|ACLH01000059.1| GENE 30 26067 - 26828 1111 253 aa, chain + ## HITS:1 COG:no KEGG:cauri_0594 NR:ns ## KEGG: cauri_0594 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 253 1 253 253 300 100.0 3e-80 MKRINRTLTAAVLAGSLALGGTAVASAQIPAPATLEVDGLVYEKQQDGSYLHRNKLGDEA LNTSMTAEEAEFIWEQQQAQQAAEEDVEVLDNQPPADGAENPEGEGNEGSTNEGEGSTEG EGSTNEDSSSNKSDFDKKQLAWLALPAALVIGGVTWYLAKDGKTYVKSQEAAQKDAPTAE EKAASEQMLQENKDEVIAQGGQIADSTAAQAPAQSRGISAETGSNTVARGLAALAFAAMI AAGAFAARRKFFA >gi|227860861|gb|ACLH01000059.1| GENE 31 27237 - 27602 444 121 aa, chain + ## HITS:1 COG:no KEGG:cauri_0593 NR:ns ## KEGG: cauri_0593 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 121 1 121 121 117 100.0 1e-25 MKRISRNLTAAALTGALALAGVTAAHAEEAGSSDINNSSSAGTEGNNGSSEQGGDNGSSD GDKGDKNKDGQSSFDDFKGKLSSKDGKPTELGIAAIVLGVLGALAALGPAAAQALGINLP F >gi|227860861|gb|ACLH01000059.1| GENE 32 27826 - 28587 843 253 aa, chain + ## HITS:1 COG:AGl1871 KEGG:ns NR:ns ## COG: AGl1871 COG1540 # Protein_GI_number: 15891052 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 251 4 250 255 231 54.0 9e-61 MSALHIDLNADLGETTAGNPVADDAAMLQLVSSANVATGFHAGDPHSIAGTLKAAAEAGV TVGAHVGYNDPAAFGRRFIDYAPAELADEVTYQIGALQALAQANGTQVAYVKPHGAMYNT IVHHEAQAHAVIDGIKAFGDLPVMLLPGGIAVDFAEKKGLTVIREAFADRNYNPDGTLVS RREANAVMGDEGDVVKRVLEVAETGSITAIDGSVLNVDAQSVCTHGDSPGAVELLRGVVK ELQARGIEIRSAI >gi|227860861|gb|ACLH01000059.1| GENE 33 28587 - 30134 1392 515 aa, chain + ## HITS:1 COG:Cgl0975 KEGG:ns NR:ns ## COG: Cgl0975 COG1984 # Protein_GI_number: 19552225 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Corynebacterium glutamicum # 226 514 3 292 293 190 41.0 5e-48 MQIHPVGTRALLIELEDLSQVMAWHAALDANPLKDQVDAIAAATTLLLTFATPNSAAAAA EKLQDFHPTAQAGEDPRFVEIDVLYDGEDLDEVAELMGMSREGLIDWHTSTEWLAAFGGF APGFTYCTPADPAQNFNIERRATPRTAVPAGAVGIAGGFSAVYPRVSPGGWQLLGTTSTP MWESDAHPPALVQPGDRVRYRAVSSLPDVVSTTPFGRRTPARLPRLEVLDAGLLTLFQDQ GRPGRGNLGVTPSGAADLAAAATANVAVGNPRGATVLENIGGIRLRALTDAVMCVTGAQS RVLLDDMPVHLARPVLVTAGSTVTVDPATVGLRNYIAIRGGIVADAELGSASTDVLSGLG PAPVRLGDVIGVLPRSTAMTDAQLSNPMRVREGAHGQTEGVLRCVLGPRDDWFTPESLEA FLATEWTVTAQSNRVGVRLVGPEGSVALSRARQGELPSEGMVAGSVQVPPSGEPVIFLRD HAVTGGYPVIATVLEEDIDIAAQLPPGATVRFELA >gi|227860861|gb|ACLH01000059.1| GENE 34 30159 - 31958 2105 599 aa, chain + ## HITS:1 COG:AGl1864 KEGG:ns NR:ns ## COG: AGl1864 COG4770 # Protein_GI_number: 15891049 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 599 1 575 576 551 53.0 1e-156 MISAVLIANRGEIAVRIARTARDLGIRSIAIYSEADAGALHTQVADEAYALPGNSAADTY MNIPALLDIAVRAGADAIHPGYGFLSENADFARTVAEAGLTWIGPSPESIELLGDKIAAR RVAEEVGAPLAPGTSDPIDDWQEARAFAEEHGLPIAIKAAYGGGGRGLKVVENLEDIEAA FNSAGREAKEAFGRAECYVEKFLTHPRHVEAQILADTHGNVAVLGTRDCSTQRRFQKLIE EAPAPALSDEQRTGIHEGARAICAKVGYTGAGTVEYIVSEDGTISFLEVNTRVQVEHPVT EMVTGVDIIAEQFRIASGDPLSFLSDAPASDTSSPSEAHASDASDPEMNGHAFEFRINAE DILNGFAPCPGTIVRFEPPTGPGIRVDSGVRSGSIVPPYYDSLVAKLLVWGPTREIALKR AQQALQEFDIEGVRTVLPFHRDMVSSQVLVDHGDADAAAGIYTDWLDHNYRPSAEATSAT VPVEAIYAQRTRVALEIDGKLVSVGFPTDMLSQGPVRGASASVASGASSSGNEVTCPYEA NLVAWNVEDGEAVEEGQAIATIEAMKMESAVKAPAAGKLSRAAKEGSRLEPGAVIATIS >gi|227860861|gb|ACLH01000059.1| GENE 35 31981 - 32580 746 199 aa, chain + ## HITS:1 COG:AGl1876 KEGG:ns NR:ns ## COG: AGl1876 COG1802 # Protein_GI_number: 15891054 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 199 38 241 249 80 29.0 2e-15 MLADSVASALRAAISEGEYMPGHQLSEVRAAERFECSRNTLRESFAMLASERIVERIPHR GVFIATPDGDFVRDLYLARAAIEPAAARYATFEDPGELVRLTESAVLTDAPRPLINQRFH KQLVAGLGSPTLDRSMSHLLARMRLTFLLTLERYPQIHDNHVQANIDLAHLIAQGEREAA ADACRADLMRAMESILRVL >gi|227860861|gb|ACLH01000059.1| GENE 36 32834 - 33613 887 259 aa, chain - ## HITS:1 COG:BS_ycsI KEGG:ns NR:ns ## COG: BS_ycsI COG4336 # Protein_GI_number: 16077475 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 7 258 3 256 257 287 54.0 1e-77 MGMMQTPAEVRAFARTHDMTTTAGHASGFMQANLIALPREYAFDFLLFAQRNPKPCPIVG VLEAGQFASELIPGGDIRTDIPAYNIYEDGQLTQTLDDASPFYSDDIVSFLIGCSFTFEN ALVENGISIAHIDQGRNVPMYRTTIPCAPAGAFSGPMVVSMRPILANQVSDAVRITSRYP GVHGAPVHVGDPAAIGIEDLSQPDFGEAVDIPEGTIPVFWACGVTPQAIVMNSRPSLAIT HAPGKMLVTDIPDRDFLIP >gi|227860861|gb|ACLH01000059.1| GENE 37 33604 - 34857 1526 417 aa, chain - ## HITS:1 COG:Cgl0978 KEGG:ns NR:ns ## COG: Cgl0978 COG1914 # Protein_GI_number: 19552228 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Corynebacterium glutamicum # 8 415 20 433 436 386 59.0 1e-107 MRLEPTNPSASREAAHNAPTEVQPPKGIGAMAGAMFLMATSAIGPGFLTQTSVFTVQMGA AFAFAIALSIIVDIAIQLNVWRVLAISGMRANELGNTVLPGLGWFLAILVFIGGVVFNIG NIAGSGLGLNAMLGIDARIGGLIASAIAIFIFLSKRAGVALDRIVAALGAIMILLMLYVA IVSQPPVGEALKNTVMPESIDFFVITTLIGGTVGGYITFAGAHRLIDSGLSGPENVGAIT RTSVLGIIVTGIMRVLLFLAVLGVVSTGVALSEDNTAADAFRHAAGEFGLRAFGVVLFAA GLSSVIGASYTSITFVTTQKVNPRTRNFLTVGFIVVCAILFAILNSAPQKLLIFAGAFNG IILPIAFAMVMWVAFKRHDLTHGVKQPMWLLIAGVLALVLEIFIGVKSISGIVDLWA >gi|227860861|gb|ACLH01000059.1| GENE 38 35076 - 35510 429 144 aa, chain + ## HITS:1 COG:RSc1637 KEGG:ns NR:ns ## COG: RSc1637 COG0183 # Protein_GI_number: 17546356 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 1 124 1 124 394 92 42.0 3e-19 MPQDIYIAGAARLPIGKFGGSLARLSLTELGSLAAEVAIERSGLSGADLDTAVASNVMPV VPKDLYLSRAIAKNVGMPDSSTAMGVNRLCGSGVQAVISAAQLLQSGDGSLALAVGAESM SNAPTPSKARALASAWVTANSTTG >gi|227860861|gb|ACLH01000059.1| GENE 39 35480 - 36235 1036 251 aa, chain + ## HITS:1 COG:RSc1637 KEGG:ns NR:ns ## COG: RSc1637 COG0183 # Protein_GI_number: 17546356 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 1 247 136 392 394 233 54.0 2e-61 MGDGKLYDWLTGALSCPFGTGHMGVTAENVAADNTITRERQDEFAAESQERAAKARAEGV HAEEIVPVGELDFDEGVRETDVEKLAKLKPVFVKDGTVTAGNASGINDGAAAAVLATAEE VTKRGLDPLAKIVSWSVAGVDPTRMGIGPVAAVPKALEKAGLSLDDIDLIESNEAFAAQA IAVQDQLGFDPAKTNIYGGAVAHGHPVGATGIILLTKLAYALRRESKRYGLVTMCIGGGQ GIAMIIENGAK >gi|227860861|gb|ACLH01000059.1| GENE 40 36236 - 38422 2365 728 aa, chain + ## HITS:1 COG:RP560_1 KEGG:ns NR:ns ## COG: RP560_1 COG1250 # Protein_GI_number: 15604414 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Rickettsia prowazekii # 3 361 5 383 423 221 36.0 5e-57 MSITKVAVIGAGSMGSGIAALCASAGMDVVLLDQNAEGAQKGVEIQLKRKGFHLPEFAER VRASDDYALLEDREWVIEAIFEDLGAKHSLYQAIEPHLSAEALLSSNTSTLPLASLLEGV PETRRDKFAITHFFNPPKVMRLVELIASGPTEAALRTTIEQTLGKIALECRDTPGFIANR VGCYWMAAGVARAREFDVSYELADASFGRAFGIPRTGIFGLLDYIGLQLVKPIWKSLETA LPAGDPLLDVPLGDDPFIEGLVSRGLTGRTGEGGFYRGRNEAINASYEYVPRSALSDPVV GLKDPREVMDTDSPGGRFARAVFLDTLAYCCEVAPSIADHVGLIDEGLTLGFGWKKGIFA LADAIGIDHVASAYGADVPSLVSAAAQAGGFYGEGSVLSSTGSRQELAPREGVVTLASLE TETIVSLDAGAVHAVSTSAGRMGIIDLHTPMNSLPTPALEVIRAALDAVSSANLVALVIG NDKPVFSAGADLASIAAAGESGSASRVESLIADGSKTLRALKFAPVPVVAAVRGVALGGG FETALACDRIVAHADTRLGFPERTVGLYPGWTGTISSLERIKAAGVEDYHQKAFDFIASA RNFSSAFEAQKAGFLSSDDVVLMSFDHVLARALCEAADLATSYTPPADASIEMYSGSPAL DRDWPIDGTTENDHVIVAKLAELYTGSGSLSFTEFCEREVEFDVPLVLLPANVERAKHMA ATRKPLNN >gi|227860861|gb|ACLH01000059.1| GENE 41 38724 - 39305 199 193 aa, chain - ## HITS:1 COG:no KEGG:cauri_0584 NR:ns ## KEGG: cauri_0584 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 193 129 321 321 371 100.0 1e-101 MAIPSEHILTNEGVRCTSVARTCLDIARLWSFAEGLMAMDCALRRRLVSVDELRRMAVEL GRVKGIAAAREAVKYASSLPEAPYESWARALIIEAGLGNKIRLQCELPGGFRPDLLVGDN LVVEIDGAVKYDGETFGKPTDAVIRAERQREKHIQNMGFVVLRFTPAELLQEKGRVVSEI RSALEGLQRRQSA >gi|227860861|gb|ACLH01000059.1| GENE 42 40061 - 41302 1404 413 aa, chain - ## HITS:1 COG:DR0551 KEGG:ns NR:ns ## COG: DR0551 COG1960 # Protein_GI_number: 15805578 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Deinococcus radiodurans # 33 412 30 413 414 281 39.0 1e-75 MEIRVTIVANRHSYCLFIGELTMSHNLFESTTDFLGVFDDLSASDAAGWKRAAQFREYSA PVINQHWQAAEYPLDLVQRLGDLDVMTDGLAVEGHEQMSTLGAGLALMEVTRADASMGTV IAVQAGLAMRSIAMLGSPEQQAEYLPQMASCSLLGAFGLTEPAHGSDSIALETTAVRDGD EWVLNGEKKWIGNGASGGITIIYARMEDGNVGGFIVPQEAPGYSASVIEGKLSLRAIHQA HITLTDCRIPASNQLPGCRSFKDVSRVLTATRIGVSWMALGSAVACYEIARSYVLERVQF GRELAKAQIIQQRLANMVLDLSQMMLTCREVSLRETAGTLAPEQASAAKLHNTRAARRIA ADARDMLGGVGILLENDIARHFADIEAMHTYEGTDTVQSLIMGKKITGFSAYK >gi|227860861|gb|ACLH01000059.1| GENE 43 41462 - 42019 651 185 aa, chain + ## HITS:1 COG:mll7734 KEGG:ns NR:ns ## COG: mll7734 COG1309 # Protein_GI_number: 13476418 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 4 182 10 192 213 78 28.0 8e-15 MANQRRRDQIAAAALDLFDQRGYHATGMEDIAKAVGMRASSLYNHFSSKQELLAEVTITA MEDLLRANAACLAGLSDPRDKLVATMKAHVIYHATHARRVRVVNNELTNLEEPHKSVVLQ LRRDYVARWMAVVNEGDFHAENLKIACWALIDMGIGVAQWFSPDGDYTAEALGDMYGQFA LRQLT >gi|227860861|gb|ACLH01000059.1| GENE 44 42028 - 43077 1225 349 aa, chain - ## HITS:1 COG:no KEGG:cauri_0581 NR:ns ## KEGG: cauri_0581 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 7 349 1 343 343 582 100.0 1e-165 MPNSLDMLRAANPVPDAALDDASLARSEDTLAKITKGRPTWTIAAASVAVLALIGGAFPL LNNSEPVASAAEILTQAGEAAATQPDAVDKGVTAKEYMKRVDTLGDATAITEYAVDAGGA VEVSSQGEVPGFDPQPSINPEDLVVATDRAGLEKLADSFPNHALGALELLLQPGLSSEQQ KIAYDMLADAEGNEVGTVEGEGEDQLVTVIRDSDRVSFSVLPATGQLVRVVGLVGPDVET TIDATAILDCVSVTGLEGPDRISLACADNNYLVNELDWQRWGADSAEAEGVAIENDCDPN CAEGKFSEDRVKVVVDKRVACGYHAEVYSRVRVQYPDGREEEQQIGCAP >gi|227860861|gb|ACLH01000059.1| GENE 45 43070 - 43636 467 188 aa, chain - ## HITS:1 COG:CAC1509 KEGG:ns NR:ns ## COG: CAC1509 COG1595 # Protein_GI_number: 15894787 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Clostridium acetobutylicum # 34 174 15 167 184 63 31.0 2e-10 MPICNARLSDATYSVSPRTIWSYLVSVLTLPGSRKREFSRLFREHYPAVLAYLRRRVPPS HAEELAADVFERAWAGFDSLRGTPLPWLYGIARNVMREFYRTRRETENLDDHELESYAGY DAVDANLDITRALMQLPHAEREILTLHAWEGLDHPDIAEVLGISRNNVRVRLHRARTHLS ELTGETDA >gi|227860861|gb|ACLH01000059.1| GENE 46 43660 - 44700 840 346 aa, chain + ## HITS:1 COG:Cgl0326 KEGG:ns NR:ns ## COG: Cgl0326 COG0328 # Protein_GI_number: 19551576 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Corynebacterium glutamicum # 1 345 1 338 340 320 54.0 3e-87 MEPLELSALTGTQSRTYGTRKITKDMISAPVHVAIALWDERWDSAENGTIDGWVIAVNTK KTRFVRKGQIQKGDIVEVAVREFEKATKNIRGRKWIVTGRRQAALRAALEERGYTVTGSF AEENRASKSASSVRRKQAGITARRAKKEGEAPRKKQVVKVETPKAHWWPNFSTASSWPEG ATVRIATDASSDTVFKGSMCFVASNGDYRLRTRRTTASTDELELESLTLALKYLLKVGAT KAIIESDSVAALEAVEQIRTKGSKAMRSRGVWRGLSSGSRSRFQQAWHDVEGVCEVTIRR VMGHAGDPLNRAADQIAYMGLRAIAHPMKQSRATLKEGIRKTLAKL >gi|227860861|gb|ACLH01000059.1| GENE 47 44739 - 45212 611 157 aa, chain + ## HITS:1 COG:no KEGG:cauri_0578 NR:ns ## KEGG: cauri_0578 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 10 166 166 279 100.0 2e-74 MSNPFDSNPFEEPAKPFNGRGANPFAEPARESYAEPSANPSVEPFADPISEPFSESFAEP ERAYAPAPMPDYSLEQHSMNGTIHSFSLFKGLLSLFSLLVGFTGITDGDVAMGIGFALPG AWYFLKTLQQKANPTTPQKRHWFVIWFIAIVLMFFGA >gi|227860861|gb|ACLH01000059.1| GENE 48 45209 - 45739 450 176 aa, chain - ## HITS:1 COG:Cgl0695 KEGG:ns NR:ns ## COG: Cgl0695 COG1434 # Protein_GI_number: 19551945 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 23 168 3 146 151 134 50.0 7e-32 MEPTTHMLMLTSMHAKLAGMQFPLLVLGARVESGVPGSLLRSRLDRAVVMARVLPEEPII VSGYGEAEPMARYLIERGVNPERIFLEPLATSTNENLERAHALCSDYSYFRVVTNDFHVL RTRLWAWHLGIRIRMHGVGTPRKDRPWNYLREVVATPHSLLRIVWRRVIARRRLVA >gi|227860861|gb|ACLH01000059.1| GENE 49 45714 - 46607 865 297 aa, chain + ## HITS:1 COG:Cgl2273 KEGG:ns NR:ns ## COG: Cgl2273 COG0524 # Protein_GI_number: 19553523 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Corynebacterium glutamicum # 3 297 5 300 301 314 65.0 1e-85 MSMCVVGSINADLVVHTARHPQPGETLLGSGGTITAGGKGANQAVAAARLGAQVSFVGAV GSDAYAAPAMHYLQASGVDLTHVEASEEVTGLAVITVDKQGENTIIVVPGANALVSDSFV TTHSSPITGSELILLQGEIPAEGFAKAIELAKGRVVVNLAPVIEVEKEALLRADPLLANE HEAGLILEQLGLSGQGAPAELAQRLREAGFASVVLTLGARGALVSEGTKLIEVPSPQVTA VDTTGAGDAFAGALCARLLHGDDLVEAATYAARVGAYAVTGEGAQASYPDLGSKLPS >gi|227860861|gb|ACLH01000059.1| GENE 50 46608 - 47108 699 166 aa, chain - ## HITS:1 COG:Cgl0694 KEGG:ns NR:ns ## COG: Cgl0694 COG0041 # Protein_GI_number: 19551944 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Corynebacterium glutamicum # 1 165 1 165 165 255 87.0 2e-68 MQPLVGLIMGSDSDWPTVKPAAEVFAEFGVPFEVGVVSAHRTPEKMLAYAKSAHERGLKA IIACAGGAAHLPGMVAAATPLPVIGIPRALKDLDGLDSLLSIVQMPGGVPVATVSIGGAK NAGLLAVRILSAGDPALVEKMAAYQENMAAEVEKKDENLRSQLLGE >gi|227860861|gb|ACLH01000059.1| GENE 51 47134 - 48357 1228 407 aa, chain - ## HITS:1 COG:Cgl0691 KEGG:ns NR:ns ## COG: Cgl0691 COG0026 # Protein_GI_number: 19551941 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Corynebacterium glutamicum # 7 406 2 386 387 489 66.0 1e-138 MSEQHKPLVTVYGDGQLARMMQPAAAELDIHLRVLASAPDKSAAQVIPDVVLGDYHDLDV LTAAAEGADAITFEHEHVPTEHVEALIADGLNVQPQPSALLYAQDKLLMRQKLAELGAPV PRFAAIESVEDARDFAALVDGHVCLKARRGGYDGHGVWFPSAKELEPLVEELLAAGTPLM AEEKVALTRELSVLAARRPSGEVKVWPVTESVQRDGICAEAFAPAPNLSPELAERAMQVG IKVATELGVTGVLAVELFAFATKQDAGCIIASASGAPGAVVEEDIAVNELAMRPHNTGHW TQDGCVTSQFEQHLRAVLDLPLGSTAALAPVTVMANVLGAEEDPQMPMPQRVREVMERYP QAKIHLYGKDHQPGRKIGHVNVVGEDVEETRGIAHDAAHFLVYAQWA >gi|227860861|gb|ACLH01000059.1| GENE 52 48381 - 49100 943 239 aa, chain + ## HITS:1 COG:BS_alsD KEGG:ns NR:ns ## COG: BS_alsD COG3527 # Protein_GI_number: 16080653 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Bacillus subtilis # 7 236 22 251 255 204 46.0 2e-52 MIVRHTIFQNSLMTALLDGIYDGEMTIGELLGKGNFGIGTFDALDGEMIILDGVCYQLRG DGTATVADLDQGTPFAVATNFVPRIKVAAPKGLKREELSAFIDEVEPSANYMYAVRITGR FSNVVTRTVVKQSKPYPPMAQAVGGDKELRFDDVEGIIGGFRTPVFEKGISVPGCHVHFI DAARTSGGHVLDYTVDEATIELCPGTDLDLRLPLTHDFRSANLAPDDLDQQLHTTEIKG >gi|227860861|gb|ACLH01000059.1| GENE 53 49097 - 49549 634 150 aa, chain - ## HITS:1 COG:no KEGG:cauri_0573 NR:ns ## KEGG: cauri_0573 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 150 1 150 150 275 100.0 4e-73 MCPMNLMQMGRGEVVRADMTAPFRTLLFPFLELVVITGVCWIAIGWCDYNGIDLALRNGL VAIWALLAAWRFVLPLVKARRKRFIVTNLRVIAREGKRVDSIPLTDIRGARRRRGGISLA LHGYDKPMYFPSIPKAKRVEDILNEQPVWG >gi|227860861|gb|ACLH01000059.1| GENE 54 49871 - 50761 1037 296 aa, chain - ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 4 292 12 267 269 168 39.0 9e-42 MTALDMDRIREALSDDFAVIDYTESTGSTNTDLMQAEKVADGTVLLANEQVAGKGRLGRQ WVSPAGSQLIFSVLILPESLEHLGTLPLAAGLAVTDSVEKAVLKWPNDVQIDGKKLCGIL AEAGPVGEAFKSAPKTEVSKAEVNKAEINKAEINKAEVNKAEINKAEVAPKTQSANPPSA RVVVGMGINVTLTREELPIEAATSLALEGLDTDRTQLAITVLKNLRHRITQWEQQDPQLM ADYRKVCSSIGQEVRLEAPTGDVIGTVEGVADDGRINVGGEYYSAGDVIHLRPADN >gi|227860861|gb|ACLH01000059.1| GENE 55 50804 - 51460 450 218 aa, chain - ## HITS:1 COG:no KEGG:cauri_0571 NR:ns ## KEGG: cauri_0571 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 64 218 1 155 155 267 100.0 2e-70 MKKFAPLLALLLVGCSSTESTESFAPLTTVSTGTVDASSASSETTTESSTSATKSSSEGP SPTMSSKESVASPTTSAAEAQRDTVFRAIFADTVDASEVRSQLVDNGRVDRSTMRASMKG MGLDVSDSELQEYGEWVCEWVTPATRYVLVTEGKPDNLGAQDRADYDKLIGDTVSFLADT RQITVTPEQVTHALPQAVLTTCLDDATARTILANPDYF >gi|227860861|gb|ACLH01000059.1| GENE 56 51509 - 52498 1378 329 aa, chain + ## HITS:1 COG:Cgl0707 KEGG:ns NR:ns ## COG: Cgl0707 COG3839 # Protein_GI_number: 19551957 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 327 1 331 332 469 73.0 1e-132 MAKVTFENVGITYPRAEKPTVKDLNLEIADGEFLVLVGPSGCGKSTTLRALAGLEPVSSG RILIDGKDVTGLEPGDRDIAMVFQNYALYPHLTVAQNMGFALKLAKMPKAEIKAKVEEAA KTLGLTEYLQRKPKDLSGGQRQRVAMGRAIVREPKAFLMDEPLSNLDAKLRVQTRAELAS LQQRLGTTTVYVTHDQVEAMTMGDRVAVLKDGVLQQVAPPRELYDAPANEFVAGFIGSPA MNIFDYNGGRVGVRPEKMFINKGPIGFQGTVEFVEELGSESFVYVMVGEQRFVARASDDV PQRGENVVLTFNPREAHRFDPETGQRVEA >gi|227860861|gb|ACLH01000059.1| GENE 57 52624 - 53913 1819 429 aa, chain + ## HITS:1 COG:Cgl0706 KEGG:ns NR:ns ## COG: Cgl0706 COG1653 # Protein_GI_number: 19551956 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 51 427 43 423 424 554 79.0 1e-157 MKKPFLPSSLRSVRRGVVVTTAALALTLAGCSSSDEGSSSSTGSDASTTDGDGRGPITFA MGKNDTDKITPIIEAWNAEHPDEKVELKELAGEADAQRETLVQSLQAGNSDYDVMALDVV WTADFAANQWLAPLTGDLEVDTSGLLEPTVESATYNDTLYALPQNTNGQLLFRNTELADK APEKFEDVASACEAIKDDASCLTTQLKQYEGLTVNTAGFIEGWGGSILDDEGNVAVDSDE AKEGLQALVDAYEDGTISKDSTATTEEETNLAFTEGKTAFAINWPYMYTNAEEAGVKFEV QPLVGKDGVGVSTLGGYNNGININSEHKATALDFMKFIINEENQKSFAEASFPPVLASIY DDESLVEEFPYLPALKESLENAAPRPVSPFYTAISKAVQDNAYAALTADKSVDDATKDMK AAIEAASQG >gi|227860861|gb|ACLH01000059.1| GENE 58 54077 - 55054 1132 325 aa, chain + ## HITS:1 COG:Cgl0704 KEGG:ns NR:ns ## COG: Cgl0704 COG1175 # Protein_GI_number: 19551954 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 12 323 5 316 344 436 75.0 1e-122 MAGAPATAQPRRQYLRVAALIAPALIALAVVIGYPIVRAVMLSFQGNKRLNPTTGVFEEG AFAGLENYLYWITNRCMSATGQATACPDGIIATDFWPALKITLFFTVVTVTLETILGMFM ALVMNGEYRGRGLVRAAVLVPWAIPTAVTAKLWQFMFAPDGIINALIGSRIAWTTDPFYA RLAVIIADVWKTAPFMALLILAGLQMIPRDVYDAARVDGASRIQTFFTITLPLVRPALMV AILFRTLDALRMYDLPVIMISASSNSPTATISQLVVEDMRQGHFNSASALSTLIFLLIFT VAFILVRFLGADVSGTARQKKEKKS >gi|227860861|gb|ACLH01000059.1| GENE 59 55051 - 55872 1073 273 aa, chain + ## HITS:1 COG:Cgl0703 KEGG:ns NR:ns ## COG: Cgl0703 COG0395 # Protein_GI_number: 19551953 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 6 273 11 278 278 421 84.0 1e-118 MKKLGHYLGILFIMFWGLAPFYWMVVTALRHKSHTFDTTPWPTHVTLDNFRDALATDKGN DFLNALGNSLIISLVTTAVAVLIGVFTAYALARYDFPGKGIVTGIILAASMFPAIALVTP LFQLFGNLEWIGTYRAMIIPNISFALPLTVYTLLSFFRQLPWELEEAARVDGASRGQAFR LVLLPLAAPALFTTAIIAFITTWNEFMLAKQLSTTATEPVTVAIARFSGPSAFEYPYAAT MAAGALVTVPLIIMVLIFQHRIVAGLTAGGVKA >gi|227860861|gb|ACLH01000059.1| GENE 60 55872 - 56057 170 61 aa, chain + ## HITS:1 COG:no KEGG:cauri_0566 NR:ns ## KEGG: cauri_0566 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 61 1 61 61 102 100.0 6e-21 MRRELLWDTALGFVGFFAFLALAQAVLNLFHPSPAIWPGLLAGALCLAEYLLWRAKRKDL R >gi|227860861|gb|ACLH01000059.1| GENE 61 56054 - 57556 1874 500 aa, chain + ## HITS:1 COG:MT0134 KEGG:ns NR:ns ## COG: MT0134 COG0366 # Protein_GI_number: 15839507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis CDC1551 # 2 488 42 556 601 522 49.0 1e-148 MTWHDNAIFYQALVGSYKDAHGEGVGTLRGVIEKLDYLKWLGVDCLWLSPFYASPLRDDG YDIADYYAIHPDYGTMEDFDELVAELHTRGMRLMTDLAFNHTSTDHPWFQASRTDPEGPY GDYYVWGDDPLRYPEIRIIFTDTETSNWAWDPERKQYYFHRFYSHQPDLNYDNPKVHEEV FKILSFWLDKGVDGFRLDAIAYLYERDGVGGESLPETVDFVEKVRAFIDENYPEAIMIAE ANQPPEETMEFYGTGNRFHMVFNFPVMPRLYQALALGDATPVYDIMAELPELPQGCQWGT FLRNHDELTLEMVDEDQRAIMYQHYLPDEQMRAHVGIARRLAPLLGNDYRKIELFYSLLM TLPGAPFLYYGDEIGMNDAPELPDRDAVRTPMQWEPGEGAGFSTSAQTRRPIVGGVGVSV EEQLADDSSLLHRLRGLIQQRKAHPKLGTAPFEAVETGQTGVLGFQRGELLCLHNFTDQT VDLGPVELGPYGYAWLPVEV >gi|227860861|gb|ACLH01000059.1| GENE 62 57718 - 57981 393 87 aa, chain + ## HITS:1 COG:no KEGG:cauri_0564 NR:ns ## KEGG: cauri_0564 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 87 1 87 87 155 100.0 5e-37 MNTLTGFLSAITNEFKSATGINLDTVHSAPLVSHIAEDLLKHGLIPATHKDIEESYATLT GTFPKEEDLVDAELFLYSLGWLAPTSE >gi|227860861|gb|ACLH01000059.1| GENE 63 58219 - 59832 1956 537 aa, chain + ## HITS:1 COG:Cgl0688 KEGG:ns NR:ns ## COG: Cgl0688 COG4799 # Protein_GI_number: 19551938 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Corynebacterium glutamicum # 1 537 1 543 543 862 79.0 0 MTISSHLSELDSLSADTTAGKIAELKRRREAAAQPMGEKAHEKVHAQGRLTARERLDYLL DEGSFVETDMLAVHRTTDFGMGKKRPLTDGIVTGWGTINGREVCIFSQDGTVFGGALGEV YGEKMIKIMELSITTGRPLIGLYEGAGARIQDGAVSLDWIAKTFYQNVKASGVVPQISVI MGACAGGNAYSPALTDFVVMVDEKSKMFVTGPDVIKTVTGEEVSQEELGGAGVHMHKSGT SHYTASSDEEALDWVHDLLTYLPSNNRQLTPVEPYEDLGEETVDDLVLDSIIPDSPNQPY DVKEIIEALTDDGDYLEIQADRADNVVTAFGRIEGRTVGFVANQPQVFAGCLDINSSEKA ARFVRTCDAFNIPIIMLVDVPGFLPGADQEHDGILRRGAKLLYAYAEATVPKITVTLRKA YGGAYCVMGSKGLGADVNLAWPTAQIAVMGAAGAVGFIYRKEIKAAHEKGLDVAELTKSF EREYEDHMLNPYKAAERGLIDAVILPSETRSAIAKNLRFFTDKNVARPARKHGNIPL >gi|227860861|gb|ACLH01000059.1| GENE 64 59892 - 61223 1814 443 aa, chain + ## HITS:1 COG:Cgl0687 KEGG:ns NR:ns ## COG: Cgl0687 COG4799 # Protein_GI_number: 19551937 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Corynebacterium glutamicum # 3 443 9 537 537 367 43.0 1e-101 MTDLKTTAGKIEDLSAKLTESRAPQGEVPAARSAIEALFDAGSFVETDALARHRSTEFGR EHIRPYTDGVVTGFGTVDGRKVCAYAQDASLFDGTMGEVYGEKVTKLYDLAIKTGVPIVA LVAGDKPRAQEGIVSSAMQARILARATTASGLIPQITAVYADSKEASLVAALSDVVIAPD GDLQADGEHEVNVAKRVLSYLPSNNRAAAPRTEATIVAGSVEENITDADHTLDTLVDDDG AVNLADVVTATCEDVFELGAQVRGVFTGFGRVEGRTVGIIANRDSFDAEAAAKAARFIRL CDAFNTPIIEFVDTPALDVEKAALAKLVHAYSAASVGKISVIVRRAHGTGYIAFGSKELG ADLSYAWPTAEIAVADAPALATELELSEEEAAAYLTPYQAAERGLVDSVITPAATRGSLI EGLRLLDRKIIPTLPKKHGNIVL >gi|227860861|gb|ACLH01000059.1| GENE 65 61233 - 61427 370 64 aa, chain + ## HITS:1 COG:no KEGG:cauri_0561 NR:ns ## KEGG: cauri_0561 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 64 1 64 64 115 100.0 5e-25 MTASLFTVLKGNPTDAEVAALTTVLSQLDSEARAKAADTRSERDLWGQPGDVFNPSAFRN VRYY >gi|227860861|gb|ACLH01000059.1| GENE 66 61432 - 62028 708 198 aa, chain + ## HITS:1 COG:Cgl0685 KEGG:ns NR:ns ## COG: Cgl0685 COG0424 # Protein_GI_number: 19551935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Corynebacterium glutamicum # 1 195 1 195 197 268 68.0 6e-72 MRLVLASQSPSRLSILRGAGVEPVIAPAHVDERAIEERLAGAEPAEIVCALAAAKAEAIA PDYPEDVVVGGDSMLLLDGSLQGKPHTPEATVERWHAQAGRAAELITGHCVLYGEERFVE ASRTTVHFAQASDADIEAYARTGEPLECAGAFTLEALGGWFIDRIEGDPSSVIGLSLPVL RRALYSFGLNVSEFWAQH >gi|227860861|gb|ACLH01000059.1| GENE 67 62098 - 62514 651 138 aa, chain + ## HITS:1 COG:no KEGG:cauri_0559 NR:ns ## KEGG: cauri_0559 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 138 1 138 138 254 100.0 1e-66 MEMKDMLAPPPIKLPADPGADSTSDLTAGIVAHPDSPLLWALLAEQELDKHKGAEPTAFI TAYAYARTGYHRSLDRLRGNGWKGWGPVPFSHEPNQGVLRAIAALGHAAKAIGEDAEYDR IRQMLSDADPESVATLLD >gi|227860861|gb|ACLH01000059.1| GENE 68 62817 - 63968 1235 383 aa, chain - ## HITS:1 COG:no KEGG:cauri_0558 NR:ns ## KEGG: cauri_0558 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 383 1 383 383 427 100.0 1e-118 MTNPNQFGENADNSDSNVGDNSFNGSNGANAGNDNFGSFGSYGSPQSNNDSSASGWNAQD SNSGFGWGGQAGYGDYSESSAETSSFGSASSQDSQPDTDREAKDSTFGSGFAASESASGS ANTESADHKSENHETRANHDSFGASYASYNTDSSAGAEHSAESTNSNQSYSSNGYGNDGF GGGAQTESNQGHGFGQQSSDGFGSQASHSNSTSGFDSYSQQNQGFGAQEQQGFGSQGQQS FGAQEQQGFGQQNSPFAASPQNNQYPQQAAQNGGSSKSTGFFKALFDFSFSSFVTLKFSS FIYMLLVILSAVFWVGTILFSFAFFADSFVVGILAFLGAVIGGGIAFLFYVIQFRLILEF FVANIRTAQNTGDLVAKADGDKA >gi|227860861|gb|ACLH01000059.1| GENE 69 64165 - 65223 1523 352 aa, chain - ## HITS:1 COG:no KEGG:cauri_0557 NR:ns ## KEGG: cauri_0557 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 352 1 352 352 725 100.0 0 MHKAIVVFEVEGGSDKQINGHRKDTMPIVDCIKDAGWHAEVVFYRPEWSEKLFEYVSENF DAYISRVNPGNIPGGEKGYFDLLTKLSDAGLVGMSTPYEMMAYGAKDALVKLNDTDLVPA DTAAYYDVESFHKTFPASLSYGERVLKQNRGSTGSGIWRVRLADEKLAESVEPGTALPLD TKIKCTEAVDNHTEERELGEFMDFCDQYIVGDNGMLVDMRFMPRIVEGEIRILLVGPDPV FVVHKKPAEGGDAFSATLFSGAKYTYQKPEEWQELVDMFAEVRPVIAEKLGGDNIPLIWT ADFMLADGENGEDTYVLGEINCSCVGFTSELDMGIQEKVAAEAIKRVEAKHA >gi|227860861|gb|ACLH01000059.1| GENE 70 65440 - 66372 766 310 aa, chain + ## HITS:1 COG:Cgl0681 KEGG:ns NR:ns ## COG: Cgl0681 COG2897 # Protein_GI_number: 19551931 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Corynebacterium glutamicum # 26 309 3 289 301 349 60.0 4e-96 MTTFRPSTLELKRTFPLNEKGRWTVAEFDPNPPFQEYAHPERLVSAPWLSARLGINGLHV IEVDEDSLLYDIGHIPTAIRINVQTELLDSATRDIISAEDFTELLRSKGIEREDTVVLYG DKSNWWAAFALWIFELYGHEDVRLLDGGRDAWMSEERDTSFMVPDSTTSSYPEVSREESS RIFVDELRSSTATVVDTRSPDEFCGEAALKNGTGESAYGTTLTHGHIPGAINLEWDRAVY PNGCFRALSELKVSYGELEPDTETVLYSHVGAQAAHTWFVLKYLLGFKAARVYDGSWAEW GNMVRMPVER >gi|227860861|gb|ACLH01000059.1| GENE 71 66514 - 68286 2243 590 aa, chain + ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 1 590 1 591 591 828 76.0 0 MAVETKNITKVLVANRGEIAVRVIRAARDAGIASVAVYAEPDADAPFVTLADEAFALGGQ TSAESYLDFSKILDAASKSGADAIHPGYGFLSENADFAQAVIDAGLTWIGPSPKSIADLG DKVTARHIAERADAPMAPGTKDPVASADEVEAFADEHGLPVAIKAAFGGGGRGMKVAHTR EEIKDLYESATREAVTAFGRGECFVERYLDKARHVEAQVLADQHGNVVVMGTRDCSLQRR FQKLVEEAPAPFLTDEQRASIHESAKRICREAGYYGAGTVEYLVGADGLISFLEVNTRLQ VEHPVTEETTGFDLVREQFRIAEGRELSISEDPAPRGHAIEFRINGEDAAAGFMPAPGTV VTYSEPSGPGVRMDSGVREGSVIGGQFDSMLAKLIVWGPDRATAIARARRALAEYRIEGL PTVIPFHQAILNDPAFTAEDGNFKVYTKWIEEEWVNELPEYTDTTETPEAEEQEAAQKFV VEVGGRRIEVALPGNLLLGGGNKRKKSKKRRGKGAAANVSGDTVTAPMQGSVIKVAVEEG QEVEEGEVVVILEAMKMENPVKAHKSGTVTDLKVSTGTQINKGEPILEIK >gi|227860861|gb|ACLH01000059.1| GENE 72 68721 - 69161 89 146 aa, chain + ## HITS:1 COG:no KEGG:cauri_0554 NR:ns ## KEGG: cauri_0554 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 98 243 243 264 100.0 8e-70 MRDGVEIDSNDKNRQSIAEALRRNHTKHASPGALVAELPFGFWRHLTDAAHEQLLWIPAL HKAFAPRTRRKEIEQHLARINRVRNRAAHNEPFISSRRRREALHAFRSILKVEDLLNPQV TRHTTATSTLLWTIENPPTPLEPLSE >gi|227860861|gb|ACLH01000059.1| GENE 73 69194 - 69751 707 185 aa, chain + ## HITS:1 COG:no KEGG:cauri_0553 NR:ns ## KEGG: cauri_0553 # Name: not_defined # Def: putative N-acetyltransferase # Organism: C.aurimucosum # Pathway: not_defined # 1 185 1 185 185 369 100.0 1e-101 MSVNDSEFGVRLAKEHDRTYLSRLLFLADVLGDEDAHIGDFHTPDVGLYIDEWSPHVDGG VIAVSSHRVPVGGAWLRYYTTEAKGAAYTGNPEADPFDESQWATDLDPEEIPELFIAVES RYRGLGAGRRLLRNACDLAEAQEAPAVSLWIEPENTGARKLYESEGFVDIDVPGRPDAHV MLKRF Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:39:51 2011 Seq name: gi|227860860|gb|ACLH01000060.1| Corynebacterium aurimucosum ATCC 700975 contig00128, whole genome shotgun sequence Length of sequence - 4077 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 410 - 459 10.5 1 1 Tu 1 . - CDS 480 - 3911 4491 ## COG1038 Pyruvate carboxylase Predicted protein(s) >gi|227860860|gb|ACLH01000060.1| GENE 1 480 - 3911 4491 1143 aa, chain - ## HITS:1 COG:Cgl669 KEGG:ns NR:ns ## COG: Cgl669 COG1038 # Protein_GI_number: 19551919 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Corynebacterium glutamicum # 8 1143 11 1140 1140 1642 74.0 0 MSDTAHKSFSKILVANRGEIAVRAFRAAFEVGSKTVAIYPKEDRNSFHRAFANEAVRIGN EGQPVKAYLDIDEVIRAAKKSGADAIYPGYGFLSERADLARACRDNGIKFIGPTPETLDL TGDKAAAVAAAQEAGLPTLKDSKPSTDVDKLAEYAKDFNFPVFVKAVAGGGGRGMRFIEN EAELKTKCAEASREAEAAFGDGNVYLETAVIRPQHIEVQILADSQGNVMHLYERDCSVQR RHQKVVEIAPAPTLDPELRDRICADAVKFCEHINYEGAGTVEFLVDEKGNHVFIEMNPRV QVEHTVTEEVTGVDIVKSQMQIAAGLSLEALGLKQEEIHITGAALQCRITTEDPSNGFRP DTGTLTQYRSPGGAGVRLDGATAVGAEISPNFDSLLVKMTCRGVTFEQAVARAQRALNEF TVAGVATNIGFLRALLREPDFVNTRVDTSFIPEHPDLLKAPPAVDESGRIIDYIADVTVN KPNGERPTTLRPFDKLPDLDFNFELPRGSRDDLLELGPKKWAEKIRKQDALAVTDTTFRD AHQSLLATRVRGTALVTAAEAVARMTPELYSVEAWGGATYDVAMRFLKEDPWVRLDLLRE AMPNQNIQMLLRGRNTVGYSPYSNDVCTGFVQEAAKSGVDVFRIFDALNDVTQMRPAIDA VLETNTTVAEVAMAYSGDMCSPDEKLYTLDYYLKLAEEIVNTGAHVLAIKDMAGLLRPES ASKLVMALRKEFDLPVHVHTHDTAGGQLATYYAAALSGADIVDGASAPLAGTTSQPSLSA IIAAFSNSSRDTGISLKAVSDLEPYWEAVRQLYQPFEKGIPGPTGRVYRHEIPGGQLSNL RAQATALGLEDRFEVIEDTYAAVNEMLGRPTKVTPSSKVVGDLALHLVGAGVDPADFEVN PTKYDIPDSVIAFLRGELGTPPGGWPPLRDKVLEGRAPGDVTVKPVPEEEKAHLASDDST ERRASLNRLLFPKQFEEFNEFRRTYGNTEALTDTVFFYGLEEGKDYIVHHFPEGSNDRAD LKPITLRLDAMGEPDEKGIRNVVLNVNGQIRPLKVRDNNVESTVATVEKADPSNEGHVAA PFAGVVNPTAKPGDEVKAGDQIAVIEAMKMEASISATKDGTIERVAIGAATKVEGGDLIA VIN Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:40:09 2011 Seq name: gi|227860859|gb|ACLH01000061.1| Corynebacterium aurimucosum ATCC 700975 contig00129, whole genome shotgun sequence Length of sequence - 57261 bp Number of predicted genes - 51, with homology - 49 Number of transcription units - 28, operones - 14 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 8 - 36 -1.0 1 1 Tu 1 . - CDS 146 - 544 418 ## cauri_0548 hypothetical protein 2 2 Tu 1 . + CDS 1381 - 2562 838 ## COG3328 Transposase and inactivated derivatives + Prom 2712 - 2771 4.7 3 3 Op 1 . + CDS 2837 - 3523 312 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 4 3 Op 2 . + CDS 3513 - 5948 512 ## cauri_0545 hypothetical protein + Term 5975 - 6026 -0.6 5 4 Op 1 9/0.000 - CDS 5945 - 7093 2017 ## COG0372 Citrate synthase 6 4 Op 2 7/0.000 - CDS 7143 - 8075 1342 ## COG2513 PEP phosphonomutase and related enzymes 7 4 Op 3 . - CDS 8076 - 9587 2374 ## COG2079 Uncharacterized protein involved in propionate catabolism + Prom 9620 - 9679 2.6 8 5 Tu 1 . + CDS 9757 - 11064 1244 ## COG3800 Predicted transcriptional regulator + Term 11135 - 11165 1.0 9 6 Tu 1 . + CDS 11188 - 11958 666 ## cauri_0540 hypothetical protein - Term 11914 - 11952 6.7 10 7 Op 1 2/0.333 - CDS 12007 - 13431 504 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 11 7 Op 2 . - CDS 13505 - 14686 1195 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 14712 - 14771 1.5 12 8 Tu 1 . - CDS 14805 - 15440 729 ## COG0035 Uracil phosphoribosyltransferase + Prom 15405 - 15464 1.8 13 9 Op 1 . + CDS 15502 - 15786 269 ## cauri_0536 hypothetical protein 14 9 Op 2 . + CDS 15786 - 16649 225 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein 15 9 Op 3 . + CDS 16661 - 17899 1624 ## cauri_0534 hypothetical protein 16 10 Tu 1 . - CDS 17910 - 18773 943 ## COG1816 Adenosine deaminase 17 11 Tu 1 . + CDS 18804 - 20024 963 ## COG1686 D-alanyl-D-alanine carboxypeptidase 18 12 Op 1 . - CDS 19999 - 20739 731 ## cauri_0532 hypothetical protein 19 12 Op 2 4/0.167 - CDS 20746 - 21828 1427 ## COG1295 Predicted membrane protein 20 12 Op 3 . - CDS 21891 - 22925 1379 ## COG0180 Tryptophanyl-tRNA synthetase 21 12 Op 4 . - CDS 22975 - 23172 246 ## cauri_0529 hypothetical protein 22 12 Op 5 1/0.500 - CDS 23232 - 24131 1198 ## COG0708 Exonuclease III 23 12 Op 6 . - CDS 24142 - 25386 1464 ## COG2814 Arabinose efflux permease - Prom 25528 - 25587 3.1 24 13 Tu 1 . + CDS 25560 - 27743 3714 ## COG2838 Monomeric isocitrate dehydrogenase + Term 27798 - 27838 9.6 + Prom 27926 - 27985 1.5 25 14 Op 1 . + CDS 28121 - 29488 1278 ## COG3182 Uncharacterized iron-regulated membrane protein 26 14 Op 2 . + CDS 29541 - 31592 2429 ## COG0339 Zn-dependent oligopeptidases 27 15 Tu 1 . + CDS 31757 - 32785 875 ## cauri_0523 hypothetical protein 28 16 Tu 1 . - CDS 33048 - 35702 2660 ## COG2352 Phosphoenolpyruvate carboxylase 29 17 Op 1 16/0.000 - CDS 35827 - 36606 481 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 30 17 Op 2 . - CDS 36612 - 37514 1318 ## COG0214 Pyridoxine biosynthesis enzyme - Prom 37566 - 37625 2.8 31 18 Tu 1 . + CDS 37596 - 38897 1025 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 32 19 Op 1 . - CDS 38941 - 39573 307 ## cauri_0518 anti-sigma-K factor 33 19 Op 2 . - CDS 39570 - 40178 246 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 34 19 Op 3 . - CDS 40186 - 40407 209 ## 35 19 Op 4 . - CDS 40423 - 40605 141 ## 36 20 Op 1 . + CDS 40586 - 42166 1254 ## COG0526 Thiol-disulfide isomerase and thioredoxins 37 20 Op 2 . + CDS 42177 - 42791 634 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 38 21 Op 1 7/0.000 + CDS 42929 - 44248 1832 ## COG2873 O-acetylhomoserine sulfhydrylase 39 21 Op 2 . + CDS 44241 - 45395 984 ## COG2021 Homoserine acetyltransferase + Term 45397 - 45424 -0.8 - Term 45388 - 45427 1.6 40 22 Tu 1 . - CDS 45430 - 45744 302 ## cauri_0511 hypothetical protein 41 23 Tu 1 . - CDS 45877 - 46731 1048 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 42 24 Op 1 . + CDS 46756 - 47226 458 ## COG0219 Predicted rRNA methylase (SpoU class) 43 24 Op 2 . + CDS 47274 - 49145 1607 ## COG0469 Pyruvate kinase + Prom 49165 - 49224 2.3 44 25 Op 1 . + CDS 49283 - 49531 277 ## cauri_0507 hypothetical protein 45 25 Op 2 . + CDS 49535 - 51469 1789 ## COG0370 Fe2+ transport system protein B 46 25 Op 3 . + CDS 51469 - 51729 128 ## cauri_0505 hypothetical protein + Term 51794 - 51834 2.0 47 26 Op 1 7/0.000 - CDS 51710 - 53110 1475 ## COG3428 Predicted membrane protein 48 26 Op 2 . - CDS 53107 - 53556 501 ## COG3402 Uncharacterized conserved protein - Prom 53640 - 53699 1.7 49 27 Op 1 . + CDS 53615 - 53875 231 ## COG1476 Predicted transcriptional regulators 50 27 Op 2 . + CDS 53883 - 54353 595 ## cauri_0501 hypothetical protein - Term 54308 - 54341 1.6 51 28 Tu 1 . - CDS 54359 - 57259 2483 ## COG0587 DNA polymerase III, alpha subunit Predicted protein(s) >gi|227860859|gb|ACLH01000061.1| GENE 1 146 - 544 418 132 aa, chain - ## HITS:1 COG:no KEGG:cauri_0548 NR:ns ## KEGG: cauri_0548 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 132 36 167 167 222 100.0 4e-57 MFDDNGSFLLAMFEFFIFFAWFMSLWWIFGDLFRSKDLGGFAKALWVVFILALPFIGMLA YLLVRGRGMTDRAVEARQELQQRQDEYIKSVAGGSAGSSPTDEIASAKALLDSGAITQQE FDQIKARALSSV >gi|227860859|gb|ACLH01000061.1| GENE 2 1381 - 2562 838 393 aa, chain + ## HITS:1 COG:SMa0384 KEGG:ns NR:ns ## COG: SMa0384 COG3328 # Protein_GI_number: 16262658 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 36 388 39 382 400 354 49.0 1e-97 MENSEIASLISELSSSADDASELVKGLLQASINAGLKAEMDAHLGYGHSDRKAKSQVETA QENNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPRMVPKGARRLTELDDMIISLYAGGM TVRDIQHHLATTLGVDMSPDTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDG HRVVNKACYMAVGVDMDGIKHILGLWIADNEGAAFWASVCADLANRGVQDVFIVCCDGLK GLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKAVSRALREVYTAANEDTARASLDA FEASELGRKYPQSVKVWRDAWERFVPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQ FPNDTAALKTLWLMICNIEQACRPASEESKARH >gi|227860859|gb|ACLH01000061.1| GENE 3 2837 - 3523 312 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 202 2 198 245 124 38 9e-28 MNSVTISNVHKYLGEGAQRTHVLKGASLEAGEGEFLGISGKSGSGKTTLLRAVAGLLPID EGSISVFDTCVSTAAPKELLALRRNTIGFVYQDDLLMNELTALENVMLVLAAAGFDETTA HDKACEALTQVGLAELAQRFPAEMSRGQCQRVGIARALSGKRRILLADEPSAALDSENSH GIFRLFKKLASTGTTVIATSHDPIMLDYCSTAYTLIDGQLGKAAPNAQ >gi|227860859|gb|ACLH01000061.1| GENE 4 3513 - 5948 512 811 aa, chain + ## HITS:1 COG:no KEGG:cauri_0545 NR:ns ## KEGG: cauri_0545 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 10 811 1 802 802 1454 99.0 0 MLNELITKVVHSSKRYRFGAAAIAVCLGLFAFAVSADLFMMLSPQQKAQSELGNNAVRVD VPVYTRAGVVEQTLPQLDSPERGFTTQLETYDLYVDSNPSASLVYKESHWEEQAPDFGLA LVQGHWPSAPGEVIVTEDVNLSLGENTTAFNGTLPLRIVGVVSNSFHSQEKAVYGASGTW NTIDADAYSMTSASVRPIVFGSEGTTPAELTDFISSQLETTNLVDRAALDDAFSTSLLTR ESLLATPPSGFADSYSFFFGLFAIVIPCALILFLWRVTYLVLHPLNRRFFELGISPFLLW KSNTSTLLRSALMYSVLGLVVGAGLAQCVRPFISGLAGLPDPGVLIPWKWLVLLLASSLA ALLIGGVATAPSTQPHPFWKDIPLPALSASFLRWSAIAIVLVAALFTVASALLGPDVFET WAPLPTMALCIVFSLFLARCPRTSRPYTPAGVALRFAEKHRQLIGTGLTLLVLCMGTAVF SSSMSASFTASENDSLTSTIAPNQAHILEKTDDGLSTRAESVQHLATALGVPAPVRVSYV QATLDMPAEMSGTFGVLSVESVRNVEQLLDRELTASEKEVLKTGALVRDHRFINQDHVSI NTSKNSGHSSLSALSMDFGPHWEKLAGGFILASTAQNLDAPAGRTQWVFTGLQEDQEKRF LDSAAQAHIPHELVLLPLIQTSSTPRAFYISLAAALLSALAVTFVFSRQLARATEAIETT FKVLGLDSSWHLRIVVLTTATLACAAIITGCLAGILPLAGMVYAMGDGLTFAIDWNALLV AAGAIALGAACGVGMTCLRYVQRPSSSATAN >gi|227860859|gb|ACLH01000061.1| GENE 5 5945 - 7093 2017 382 aa, chain - ## HITS:1 COG:Cgl0639 KEGG:ns NR:ns ## COG: Cgl0639 COG0372 # Protein_GI_number: 19551889 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Corynebacterium glutamicum # 2 381 4 381 383 496 63.0 1e-140 MSESPEIRKGLYGVVVDETAVSKVVPETNSLTYRGYPVQELARYCSFEEVAYLLWNGELP TQGELVRFSAREKALRHLDRHLIDLITSMPKSCHPMDVLRTAVSFIGSQDPEEYTKDSEH IRRTALELMAKLPTIVALDIRRRRGEGYIEPSRKKGFAENFLWMVFGEEEGSPALSRSDI EAFDKSLILYAEHSFNASTFAGRVVTSTMSDTYSAVTAAIGALKGPLHGGANEAVMKNFL EVGDPAKAEEWTLNKLKNKELVMGFGHRVYKNGDSRVPTMEAAFRELAKDHGQEQWVEMY EKMAKTMYENTSIKIQPNLDFPAGPAYHILGFDIEFFTPIFVMARITGWTAHIVEQNENN SLIRPLSAYNGKEQRSVPPKEI >gi|227860859|gb|ACLH01000061.1| GENE 6 7143 - 8075 1342 310 aa, chain - ## HITS:1 COG:Cgl0638 KEGG:ns NR:ns ## COG: Cgl0638 COG2513 # Protein_GI_number: 19551888 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Corynebacterium glutamicum # 1 309 1 307 307 455 76.0 1e-128 MAGLFGSTISNAGKRKSFREALNAPEITTLPGAFNPLTARLIQDIGGFGGVYVSGAVLAN DLGLPDIGLTTLTEVAQRAGHIARATDLPVLVDADTGFGEPMSAARTVAALEDAGLAGCH LEDQVNPKRCGHLDGKEVVPTDLMVRRITAAVNERRDENFIICARTDAAGIHGIDEAIER AKAYADAGADLIFTEALYSPEDFEKFRAAVDTPLLANMTEFGKTELLSAKRIEDLGYNAV IWPVSTLRVAMGATEEFLRDMQETGLQSEEWLERMQHRSRLYELVRYDEYNAFDQSVFTY SKDSYKPTFD >gi|227860859|gb|ACLH01000061.1| GENE 7 8076 - 9587 2374 503 aa, chain - ## HITS:1 COG:Cgl0674 KEGG:ns NR:ns ## COG: Cgl0674 COG2079 # Protein_GI_number: 19551924 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Corynebacterium glutamicum # 4 503 4 498 498 657 69.0 0 MINHEVRTHKSAEDFPIEEHLAYKIAKVAADSVEVPAETTEMIINRIIDNASVAVASATR RPVTSARVIAQAHPAQEGGATIFGVDGTYSAEWAALANGTAVRELDYHDTFLAAEYSHPG DNIPPILAVAQHKGLTGKDLIRGLATGYEIQVNLVKGICLHEWKIDHVAHLGPSVAAGLG TMLNLDVETIYQAIGQALHTTTATRQSRKGLISSWKAYAPAFAGKMGIEAVDRSMRGEGA PAPIWEGEDGFIAWMLHSPERTYTVPLPGGGEPKRAILDTYTKEHSAEYQAQAPIDMAFA LKKTLAEKGLKVEDIESIVLHTSHHTHYVIGTGANDPQKMDPNASRETLDHSIMYIFAVA LQDGEWDYETSYSDERKHRQDTIDLWHKISTVEDPEWTRRYHSNDLDEKAFGGKAVITFK DGTVIEDERAVADAHPLGARPFGREEYINKFKKLAAGKVSEEEQERFLAAAQNLENLTDL SELNVRLTDEAIATAPETSKGLF >gi|227860859|gb|ACLH01000061.1| GENE 8 9757 - 11064 1244 435 aa, chain + ## HITS:1 COG:Cgl0678_2 KEGG:ns NR:ns ## COG: Cgl0678_2 COG3800 # Protein_GI_number: 19551928 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 119 424 4 319 321 300 50.0 3e-81 MSKHYAGARIHALRKERHLTQAAMAKQLGLSTSYLNQLENDQRPLTVTVLMQLTQRFGVD ATYFAGDRDLRALAELRQLFPEASEATLTDLSGRFPELLPRLVDAAAHTPAETGPFEAVR DFFYDAHNYVHSLDIAAEELSDSLGDRVLRRGRLASVLQDEFGVTTRFSSSSPRRRTFHN RELHLRAGLTESQLVFEMALQYCLLAYPEHCAELVAELPGEEAQTIGTLGLAQYFAAAVT MPYTQFLATAEETRYDIDVIATAFGTGFETTAQRLSTLQRPGHQGVPFSFIRTDRAGNIS KRQSSTAFHFARSGGSCPLWVVHRAFETPNRITRQVASMPDDHTYLWIARFVQGQAQAWG TPRKEFVVGLGCDIAQAERVVYADALNLSPSEATPIGPGCAACPRPACPQRAFPQAGRPV SLDLNASPVSAYATS >gi|227860859|gb|ACLH01000061.1| GENE 9 11188 - 11958 666 256 aa, chain + ## HITS:1 COG:no KEGG:cauri_0540 NR:ns ## KEGG: cauri_0540 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 256 1 256 256 413 100.0 1e-114 MSNPYAAPQFSPEPTPEQPAPQKKKGGCLKWGAGAVAVFVLGGIALNAGSDSDHPTNTAA SEPSTSITAAESLESALSTPSLDINNAVADVETAGGNTGSDDNTVPAEHKNALRAAKRYL DFSSFSEAKLYDQLTSEYGSQFSPEAAQYAMDQLDVDWNAEALESAESYLDFSSFSKAKL YEQLTSEYGEKFTPEQAQYAVDTVNADWMAEAVEAAESYQELMPMSGPALLEQLTSEYGE QFTMEEAQHAVSTLGL >gi|227860859|gb|ACLH01000061.1| GENE 10 12007 - 13431 504 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 8 473 6 455 458 198 28 5e-50 MSQEAPRIVIIGGGPAGYEAATAGAKYGAHITLVEEQGPGGSSVLLDCVPSKSFIAGANI RTDFRRADDMGLNHQLSSLQLSLEALNGRVQALAANQSRDVRAGLEKIGVKVIDGRAAFS EDQHGVKGAAHKVDVTHKDGTTETLDADLVLVATGATPRILPGAQPDGERILTWQQVYDL KEEPEHLIVVGSGVTGAEFVSAFAEMGVRVTMVASRDRILPHDDADAADVLETVLAERGV ELEKNCRVETVSRTEDGNVVVKTQDGREIHGSHVIMSIGSIPNTKNLGLEHVGVATTPSG HIEVDRVSRTNVAGIYAAGDCSDLFPLASVAAMQGRIAMYHSLGEGVSPLRLKTVATAVF TRPEIAAVGFTQAEIEAGEVAARTIMMPLNTNPRAKMRSLQHGFVKLFCRATSGRVIGGV IVAPTASELILPIAVAVTNQLTVNQLADSLAVYPSLSGTITEAARRLVAHDDLE >gi|227860859|gb|ACLH01000061.1| GENE 11 13505 - 14686 1195 393 aa, chain - ## HITS:1 COG:Cgl0667 KEGG:ns NR:ns ## COG: Cgl0667 COG1473 # Protein_GI_number: 19551917 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 6 390 7 386 394 543 70.0 1e-154 MISDYVSEWFSNHRAEVIAWRRHIHRHPETSNNEVETTRFLSRTLREYGLEPHLFPETGL MVDIGPDTELGRLAFRADIDALPVTEVTGLEYTSEVPGVMHACGHDMHTTIALATACALA DLNREHPLDFGVRVIFQPAEEVWVGGATDVIEWGALEGVNSIFAVHVEPKLRVGRIGVRA GAITSATDVVEINVSGPGGHTSRPHLSADVVYALGKLLTDLPGLLSRRVDPRTGTVLVFG QVNSGYAPNAIPETGSVSGTMRTADIGIWRDMQTLFSELVEQVLAPLGVEHELVYHRGVP PVLNDDVSTALLASAAQAIDPQAVVQAPQSSGGEDFSWYLEKVPGSMARLGCWSGEGEQH DLHMGDLAPDERAIGVGVKLFGSVAEQFANVED >gi|227860859|gb|ACLH01000061.1| GENE 12 14805 - 15440 729 211 aa, chain - ## HITS:1 COG:Cgl0664 KEGG:ns NR:ns ## COG: Cgl0664 COG0035 # Protein_GI_number: 19551914 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 1 211 1 211 211 331 84.0 8e-91 MDIHVVDHPLAASRLTLMRDARSDNTAFRAALRDLGTMLVYEAARDLPVEHFDCVTPVAT AEGTRLQNPPIIVPIIRAGLGMIDPALSMIPDAQVGFIGMARDEETHEPVPYLEALPEDL SGRSVFVVDPMLATGGSLLHSLKLLADRGATDITAICMVSAQPGVDALANSGLPVRLVTA AIDPALNEDAYIVPGLGDAGDRLYGPRNIDL >gi|227860859|gb|ACLH01000061.1| GENE 13 15502 - 15786 269 94 aa, chain + ## HITS:1 COG:no KEGG:cauri_0536 NR:ns ## KEGG: cauri_0536 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 94 1 94 94 152 100.0 3e-36 MTSFDTFTIDTEHTRRLAHELATVSQASATPPPELPIDSVLGGFTGAFNSAMENLAARLA QVRADAGAVADSSFRMAREAEDADGVLANACGGL >gi|227860859|gb|ACLH01000061.1| GENE 14 15786 - 16649 225 287 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 135 270 212 337 348 91 39 1e-17 MLESALAHIARIQPAQLPDVSLPTVPDLTAAGPLAEIAHGDPRALLDTARQATEDLSTAR SALDAARGLIAATVRDLIGLGFELLQRGLPIALGLLIPNPATQAAARSALQALAMEYVGK AMLRVKQLAGELLQAAAPLIPIGQRAVRPSVRGPQEEGVVRHALTASSTASEGTTQGQAA VQAALSQLGTPYGWGGTGNGSFDCSGLTQWAWRQAGVELPRTAENQTVGRQVSADELQPG DLVVWDGHVAMYSGNGQMVEAGSPVQTNPLRTNNMGMAFKGFWRPTG >gi|227860859|gb|ACLH01000061.1| GENE 15 16661 - 17899 1624 412 aa, chain + ## HITS:1 COG:no KEGG:cauri_0534 NR:ns ## KEGG: cauri_0534 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 412 1 412 412 762 100.0 0 MNTRAIVPIKLSLSEGDFYTLWAPKWRQNGAEWQAFLGDDESVLLFNTEAEMLCFLESGT KHDLLDHPKWEVFNSQAADRVVPEKKHVYDLIGMPKHLAGRPSHENVSTVARCLEIAQAL AEVSAAEHTVIFFASHSILRNPARGADHYAGEQGMSEWSGVGRVIHSNWRSVIEDLDKVV KVVPSSDFTQDATTNAATRISAASEAAEEARKKAEEERKAAAESADPYDSSPWAAAGIDP VKITADQRTVYTLRTYLDGKPVFLGKWGEIFTFPSSKVLVRWIMENDDHDLAKVSTWEEV VAAANAGELEVTVHPDNQYSFYGIVRDIEKGPESVDTDQMSRCYEVCADAADWAGDDSIN SYMLQNPRFQDYLGYMLGSTEHAGYVPSKPYTEHAESWKGLEEMLTKRFSRF >gi|227860859|gb|ACLH01000061.1| GENE 16 17910 - 18773 943 287 aa, chain - ## HITS:1 COG:ML0700 KEGG:ns NR:ns ## COG: ML0700 COG1816 # Protein_GI_number: 15827296 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Mycobacterium leprae # 40 267 80 360 362 63 28.0 5e-10 MILMHDAPLISPENKDSGAEIFAGLPKVTLFAPLPTDASTPEELRAATHAVVQALADDHV VYAELRLRPSAFSFDAAEALAAAQEGLDVPGIDARLIVEGDASEAAVGVALTELSAAEKL RADFIPWERDVASYEEAVAAVQAGATRLVHATDLVDDFSADLDGVRPGKASAWVRDRRIA LTFAPLEELPAEELADHPLPLLQQLGFTCTVAGEKLSDVFLALSETFGYGLEEFFDLTIK AIENSFASEEDRQRLIEQQILPAYEELADPEFAEDASEVEEDSESSE >gi|227860859|gb|ACLH01000061.1| GENE 17 18804 - 20024 963 406 aa, chain + ## HITS:1 COG:Cgl0660 KEGG:ns NR:ns ## COG: Cgl0660 COG1686 # Protein_GI_number: 19551910 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Corynebacterium glutamicum # 30 370 56 406 436 347 54.0 3e-95 MKHVPALLTAIALAATPPAFAEEEESSSPTRTTAPDTDSCPHSLVPEEPTTTSERLAPGQ EAPTPLPAVEGAACGVTAPRGFRLNKDVVASAWMVSDLDTGEIIAMKDPNGRYRPASIIK ALLALVVIEELPLDQRITATLDDASVEGSAVGLGPDGVYTVEQLLQGLLMASGNDAAHAL AQAVGGDEEALEKVNAKAQEIGTRSTVAASYSGLDAAGMSTSAADISLIYRAAFANDTFA RIVDTEHVDFPGWGEMPGYELWNDNGLFLNDPDGIGGKTGYTEDAHHTFVGAINRDGRRL QAVLLDTTVEHGFRAWEQAQMLLDEASDVRPGDGVGLVDDFAAGKEEPSESVLTSPVPTT PSAPATSEATAGSSSFGDSQGWIGWLVAGLVALLVVVVATFSLLRR >gi|227860859|gb|ACLH01000061.1| GENE 18 19999 - 20739 731 246 aa, chain - ## HITS:1 COG:no KEGG:cauri_0532 NR:ns ## KEGG: cauri_0532 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 246 1 246 246 471 100.0 1e-131 MLPASFAPNLYAHFTLDSRATSRELGVQLAAADAHLEGLGYLPEDEEREELAVAARILCE PSSRAGYDQMMESGARLTWAQLDDYATTGRWSESYHASAPTAPAQDAPRATPGTRVILAV IDYVIAAIGASLFVSVGIFNSDVSEVWLTSVSAIITVAYYICFEVRVGATPAKLIAGYTV RDATTHNKLTWQQSIKRNWWRVASLVPLIGPLVAFFGALYVVTTIGAKNNLRGQHDILAN AEVVKK >gi|227860859|gb|ACLH01000061.1| GENE 19 20746 - 21828 1427 360 aa, chain - ## HITS:1 COG:Cgl0658 KEGG:ns NR:ns ## COG: Cgl0658 COG1295 # Protein_GI_number: 19551908 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 333 1 331 361 345 51.0 6e-95 MAPTTRPDEKKTDDYGIERAYADEPGAVDKVREKSGFIDHIMKMLDRYGSQGGNQFAAGI TYFSVLALFPIFMLTVAAAATVLANRPDLMQQLEEQITNAVSGDLGNSITELLHTAIEQR GAMYGIGGLTTLWSGLGWMNNLRIGISAMWMQDPTDAPGNFVTKKLSDLLGLIGLLVAMV IAFGVTAAGSSGLTQKIFEWVGIESFPGMGTVLVIAGIVIGLIANFLVFWWMVAFLPRTK VPTKSGLMGAAIGAVLFEAIKQLSTVIMSSAAGNPAGAVFGPVIVLMVVMYLVWRVVLYV SAWTATTEESLELLVPPVPDQAVIRVRNEIRQGPNTGVTLGAGAALGAAAAGAWALLRRK >gi|227860859|gb|ACLH01000061.1| GENE 20 21891 - 22925 1379 344 aa, chain - ## HITS:1 COG:Cgl0657 KEGG:ns NR:ns ## COG: Cgl0657 COG0180 # Protein_GI_number: 19551907 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 3 343 5 345 345 533 76.0 1e-151 MTDSTSASNSASRVLSGIQPTADSYHLGNYLGALKQWIDLQDSHEAFYFIPDLHAITVEQ NPEELRHRTVAGAAQLIALGIDPAKSTLFVQSHVPAHAELTWVLQCLTGFGEASRMTQFK DKSLKQGQDRTSVGLFTYPVLMAADILLYSPHYVPVGEDQRQHLELTRNLAERFNNKYGV VFRVPEAFIPEGSAKIYDLQEPTSKMSKSGANPKGIVNLLDAPKTSAKRIKSAVTDDLGV VAFDREKQPGVSNLLAIQSALTGESIPDLVDKYAGQGYGHLKVDTAEALEAFTTPLKARY DELMEDRGELERILAQGAERAMEIATPLVDKVYEAVGFLPARRG >gi|227860859|gb|ACLH01000061.1| GENE 21 22975 - 23172 246 65 aa, chain - ## HITS:1 COG:no KEGG:cauri_0529 NR:ns ## KEGG: cauri_0529 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 3 65 1 63 63 88 100.0 7e-17 MLMTRAIIYFVLGAILLALGIWWWTIVGPSFAFLGPIILQGVGGAFMVAGFAVMMDVISP TSRKI >gi|227860859|gb|ACLH01000061.1| GENE 22 23232 - 24131 1198 299 aa, chain - ## HITS:1 COG:Cgl0651 KEGG:ns NR:ns ## COG: Cgl0651 COG0708 # Protein_GI_number: 19551901 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Corynebacterium glutamicum # 1 298 1 303 304 372 64.0 1e-103 MSFTIASVNVNGIRAACKQRNENNPGMNAWLETTPADVVLMQEVRANPEQTQKALAPALE AGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEGVRVASLYLPSG DTDSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKANEKKSGHLP EERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVARRLHPEADG PYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEERWSDHSPLLVEYK >gi|227860859|gb|ACLH01000061.1| GENE 23 24142 - 25386 1464 414 aa, chain - ## HITS:1 COG:Cgl0650 KEGG:ns NR:ns ## COG: Cgl0650 COG2814 # Protein_GI_number: 19551900 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Corynebacterium glutamicum # 9 394 29 414 424 416 64.0 1e-116 MKAKNTRIQRRPVPRQTEISTTRRTIVMIAMALGAFAIGTTEFTSMGLLPLIADDFGITE DTASVVISVYALGVVVGAPVIAALTGKLPRRRLIILLIGFLLVGNLLTALAPNYGVLLVA RFIAGLPHGAYFSVANLAAVSMAPPGRQGFAMSMVGMGLSIATVIGVPAAQALGQGLGWH AAYFLVVAIAGLTMILLFFLFPHMTRMPQTDMFTELGALKNSQVLLTVFLGTVGFGGMFA VYTYITWTMTDVAGMDPSHTWIVLMAYGIGMTTGNVAGGWLADRNLEFGIIFALICMVGV SVTFYFVAHSAWAGTVVFGVLAFFGSILVPSLQLRLVNVAGDAQTLAAALNQSALNIANA AGAAIGGAVVGAGYSYNSTALAGAGLAVAGCLTWVITMWDKRRLAPSVKIIEQS >gi|227860859|gb|ACLH01000061.1| GENE 24 25560 - 27743 3714 727 aa, chain + ## HITS:1 COG:Cgl0644 KEGG:ns NR:ns ## COG: Cgl0644 COG2838 # Protein_GI_number: 19551894 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Corynebacterium glutamicum # 1 727 1 738 738 1095 78.0 0 MAKIIWTRTDEAPLLATYSFKPVVEAFASTAGIEVETRDISLAGRILAQFPERLGDKKVS DALAELGELAKTPEANIIKLPNISASLVQLKKAIAELQAAGYDLPEYEEAQEKYDAVKGS AVNPVLREGNSDRRAPIAVKNFAKKNPHKMGAWSADSKTNVATMDANDFRHNEKSVIMPE EDTLSIVLKTAEGEQTLLEKLPVLKGEVIDGTFMSAKALDEFLKAQVARAKEEGVLFSAH LKATMMKVSDPIIFGHVVRAFFADVFEKYGEELEAAGLNGENGLGAIYEGLDKLENGAEI KAAFDAALAAGPDLAMVNSHKGITNLHVPSDVIIDASMPAMIRTSGHMWNKNDEEQDTLA VIPDSSYAGVYQAVIEDCKANGAYDPTTMGTVPNVGLMAQKAEEYGSHNKTFKIPAAGTV EVRNSKGEALISHDVEAGDIWRACQTKDAPIQDWVKLAVNRARLSGMKAIFWLDPERGHD ANLIELVKKYLADHDTEGLDISIEDPVTATKISVERIRKGEDTISVTGNVLRDYNTDLFP ILELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQVQEENHLRWDSLGEFLALAESFR HEHNTNGNAKAGVLAAALDKATETLLDEGKSPSRKVGENDNRGSHFFLTLNWAKELAAQS DDAELAEAFKPVAEALEAKAGEIEQALLDVQGSPVDLGGYYAPNEEKLNETMRPVAAFNE IIDGLKK >gi|227860859|gb|ACLH01000061.1| GENE 25 28121 - 29488 1278 455 aa, chain + ## HITS:1 COG:Cgl2275 KEGG:ns NR:ns ## COG: Cgl2275 COG3182 # Protein_GI_number: 19553525 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Corynebacterium glutamicum # 9 436 33 459 475 242 35.0 1e-63 MSRTALRSFIQRIHFYGGMFVGPFILVAALTGCLYAMAPTLEKVVYRDVMTVPAVEHPVS LEEQIQAAQHEHSDMPVSQVWPATSPTDSTRVLVSDDSIDESLQRTVFINPATAKVIGDY PTYSGLGEMPLRRWISSLHESFHLGKVGELYSELAASWLWVMACGGLYMWWIRRRPKNKA TANATQRQPKRSARWKATRLHSTIGAWIFIGLLGLSATGITWSGLAGDNVDSLVERMNWK ATPIETALPGTTAETHEHTGHEGHEGHGVGGASSSSSVATEAERVLATGRAEGLTGPLRL YPPEDANSAWQVSERWVEWRTTSDAISVDGATGEIIDRQPFSSLPLFSKLSSWGIYLHMG IMFGLPLQIALLALGLSTAALVVLGYYMWWKRRPRFLPTAHFSWATTGLGALFAATVGVF LPLLGITLAAFLILDVILVNRATAPRKERTPVPVG >gi|227860859|gb|ACLH01000061.1| GENE 26 29541 - 31592 2429 683 aa, chain + ## HITS:1 COG:Cgl2248 KEGG:ns NR:ns ## COG: Cgl2248 COG0339 # Protein_GI_number: 19553498 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Corynebacterium glutamicum # 5 683 6 677 678 783 64.0 0 MTNPLLTPSTLPYQLPPFAEIKVEHYRPAFDEALALHDAEIASITDNPTAPTWENTVEAL ERSGQDLDRVMAVFGNLSGTDVTDEMEEIAADIYPRLSAHYDAIYQNEVLYARIKEATPP ADDAEGQRLHDHLLRTFARKGADLDAAGKARLSEINQRLSALSEEFGRNLMASTRERAVS FTEEELEGLPAERIASAKADAEALGREGFVIPLELPTVQSELSRLVREDARGRLYGASAS RGSENNIPGLIEAVQLRAERAELLGFATHADYVIAEETAATADAARTMLFDLAPAAAANA EGEQKLLAEEATLNGQGFSAADWPYWESKVRARDFSLDEDELRKYFPLDQVLEKGVFAAA ERLYGITVTPRDDLEGYAEGVRVWEVRDGDISHVGIDSHEDKGIGLLLTDYFGRPTKRGG AWMSEFVGQSRLLERKPVIVNVMGITKPTDGSQPLLSMDEVRTVFHEFGHALHGLLSDVR YPTFAGTNVPRDWVEFPSQINENWALDKNLVKEYARHVETGEPIPDELLDAISAASEFGQ GFATSEYLGASIIDLAWHSLSAADAAKLEATPEAVAEFEAEALRAAGLDNKLIAPRYRST YFNHIFAGGYSAGYYSYLWAEALDADGFEWFKEQTDLHAAGQKFRNVILSKGASRDFTEA YREFRGRDKDVAPLLKRRGLAGA >gi|227860859|gb|ACLH01000061.1| GENE 27 31757 - 32785 875 342 aa, chain + ## HITS:1 COG:no KEGG:cauri_0523 NR:ns ## KEGG: cauri_0523 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 342 11 352 352 705 100.0 0 MRLQTYFAALGRAIDLVAECAGLSESDLVALGAAPADATVFLSLHHTYFGHTSSTKKQRT AVEAARRRGHGLVTLQLIEHFVDKVRDHNKAWDLRVELCQTSAELVEKVARKRLRQMRKP RTYAERAKLTQHGNGLATLTVTADSLQLTGVFESIDQERPGESFLENLDGGGVKTEVATM AVLQLDDYAELLKGNTDKDGEEFIVRTTSGATMTGSQLVERALLDKGIIVAVSREHGPLD VFRFQRFATAKQRLALAAENPCCAWEGCKVPFEKCQIHHIKAWARGGPTNILNLVPLCPY HNGVNDDDPDAPPSRGHMDRIGGRVAWIPPYDAAPVFTSTFN >gi|227860859|gb|ACLH01000061.1| GENE 28 33048 - 35702 2660 884 aa, chain - ## HITS:1 COG:Cgl1547 KEGG:ns NR:ns ## COG: Cgl1547 COG2352 # Protein_GI_number: 19552797 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Corynebacterium glutamicum # 9 884 5 919 919 972 57.0 0 MSTPAPEQVREDIRFLGRVLGRVIAQQEGEDVFELVESTRRMAFDIAHGDAKPEDLVAIF RDLDITKVNLVARAFSYFALIANLAEDLDDESVEAPVSLRKTFAKLKEEGVAPADAASVI RGAHVAPVLTAHPTETRRRTVFDTQTRIKTLLKESHRGGDMAAIEKEMYLRMTLLWQTAL IRIARPTLEDEIDVGLRYYKLSLLDQVPALNRAIRHAMRETFGQQLPDSPVVRPGSWIGG DHDGNPFVNEHTLTYATRKAAATVLQYYADELGELERELSLSDRYSSSSKELGALADASH NDEKSRVDEPYRRAIFGIRKKVLARLEGEASPSAYASPEELKRDLDVIDRSLRQFNDDII ADDRLARLRSAVTTFGFHLSTLDMRQNSESFENVLTEIFAAARITPDYRALGEEEKVALL VRELQTNRPLLFPGTEKEFTEDTAKELGIFRAAARAVRDFGPKSVSHCIISMTGTVSDIL EPMVLLKEVGLGQVDVVPLFETIEDLKAGASILEKLWQMPVYREHLRSRGDVQEVMLGYS DSNKDGGYLQANWALYDAELALVELCVRHGVELRLAHGRGGAVGRGGGPTYDAILAQPKG AVSGSVRITEQGEVISAKYGAPETARRHLEAFISGALEASLLDTEPIADPERAYEIMREL ADLSGTAYRQLVDDPGFIAYFTQSTPLHEIGELNLGSRPTSRKQTTAITDLRAIPWVLSW SQSRTNIPGWFGVGSAVTAWVQQAGGDEEKRWEELRELYRTWPFFRSVFANMAQVMAKAE MQLARLYANLVDDKETADRIFGLISVEFERTREVYLKVTGNADLVSENQRQARSLKRRYP YLLPLNAIQLELLRRYRRGDDQFLVSKTIQVTMNGLATALRNAG >gi|227860859|gb|ACLH01000061.1| GENE 29 35827 - 36606 481 259 aa, chain - ## HITS:1 COG:Cgl0765 KEGG:ns NR:ns ## COG: Cgl0765 COG0311 # Protein_GI_number: 19552015 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Corynebacterium glutamicum # 4 254 2 189 200 197 47.0 2e-50 MRPLVGVLALQGGVEEHLAVLESLGVETRRVRLPQDLDGLDGLVLPGGESSTIDKLARSF GVAEPLRRAVEGGLPVLATCAGLIYSARELENPAPGQQTLGLIDVTVRRNAFGNQRFSEE RVVPVALQGPRPDAEISEVGAWGAESRDGEAYGIGPRSITLDIEASFIRAPIVTRVGEGV EVIATVPAPAPDTVTGGAAGEDSAACKDGAEHDGELTHPAAGHEAIVGVRQGRVTALSFH PEENGDSRLHAAWLASFAH >gi|227860859|gb|ACLH01000061.1| GENE 30 36612 - 37514 1318 300 aa, chain - ## HITS:1 COG:Cgl0764 KEGG:ns NR:ns ## COG: Cgl0764 COG0214 # Protein_GI_number: 19552014 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Corynebacterium glutamicum # 1 300 21 319 319 462 86.0 1e-130 MTEQKNEQGRATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRA QGGVARMSDPDLIEGIVNAVDIPVMAKARIGHFVEAQILGELGVDFIDESEVLSPADYVN HINKWDFGVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEAVKHLRTIKGEIARL QNLDRDELYVAAKELQAPYDLVAEVAETGKLPVVLFVAGGVATPADAALVRQTGAEGVFV GSGIFKSGEPAKRAEAIVKAATLYDQPAELAKISRGLGEAMVGINVNDIPAPHRLAERGW >gi|227860859|gb|ACLH01000061.1| GENE 31 37596 - 38897 1025 433 aa, chain + ## HITS:1 COG:Cgl0763 KEGG:ns NR:ns ## COG: Cgl0763 COG1167 # Protein_GI_number: 19552013 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Corynebacterium glutamicum # 5 432 9 451 453 390 54.0 1e-108 MSFRLDPSDTRALPVQIAEALRTQVAAGILLPGEQVPSTRSLARDLGISRGSVVTAYEQL TAEGYLTASVGSGTVINPHLPHGRTPQPHPAPRPSPAPPRVELTPGLPDTAGIITPEWRA AWRKAAVNPSGDLPREVAAHLRHMRGLTVDPAYVVITAGARDGLSVLLRALGGHLRVGVE SPGYPSLRRVPQALGHTLVDVPTDAHGVTVPTVDLDVLIVTPSHQHPYGGSLPAARRAEL VEWARSNDVLIIEDDFDSELRYVGQPLPALAALAPEHTVLLGTFSSVISPSIACGYLVVP PSLRSAVDRVREVFGQPVGAIPQAALANYLASGALRRHTGRMRRAYKRRRDLVQAALEDA PATLLPIHGGLHAVLLCDNAVVDRAASLGLTLTPLSDYWGGVAAEEGVVLGFGHLSDVEL AAALDLVKQALTS >gi|227860859|gb|ACLH01000061.1| GENE 32 38941 - 39573 307 210 aa, chain - ## HITS:1 COG:no KEGG:cauri_0518 NR:ns ## KEGG: cauri_0518 # Name: not_defined # Def: anti-sigma-K factor # Organism: C.aurimucosum # Pathway: not_defined # 1 210 1 210 210 311 100.0 8e-84 MSNTHEFSDETFDDFLDSLPEVEPPARMKDAIFAEIDGGEAAEVIELPRRRWRAFVAVPA AAAVLVAGVVAAPQLLQLGQPDAADSARVEAESPGEKSMHDIMGAEDLMQGNADVSGAQL DIVSSASMAKSGAMVDGQPQLADGMGAQVWAVSADGEMASAGVIGQDPHDGVWMPFDGAA VKVMVTEEPAGGSEQPTGRTLATVTLASAS >gi|227860859|gb|ACLH01000061.1| GENE 33 39570 - 40178 246 202 aa, chain - ## HITS:1 COG:MT0461 KEGG:ns NR:ns ## COG: MT0461 COG1595 # Protein_GI_number: 15839833 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 18 197 5 184 187 101 30.0 1e-21 MSAPLLEVSSTPVSAMSPDEHARLNHLLVQTAAADKHAFSALYDALAPTVYSVCLSVLRN PALAEEVAQDVFVEVWTSAAKFDPQRGNARSWVGRLAHGRAVDKLRSHVAAVHRDDRDAL LTQATYTEPLEDEALGHVEAQRLRRAIGEIGEPHSTAVALAFFNGLTHAELAESTGVPLG TAKTRVRDGVKKLKAILGREGR >gi|227860859|gb|ACLH01000061.1| GENE 34 40186 - 40407 209 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLVTTAAALAVAASGLVACNDTKEDMDMMPSSEMMAPSSDAMESDSMMTEEKMTEEME SDEMMAPSEEMTK >gi|227860859|gb|ACLH01000061.1| GENE 35 40423 - 40605 141 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSVDNMLCSFACGAVWVCNQFGAHVINGLPQTFLNPSNPRHGAAPNGEIQGPETPDPKT >gi|227860859|gb|ACLH01000061.1| GENE 36 40586 - 42166 1254 526 aa, chain + ## HITS:1 COG:MT2942_2 KEGG:ns NR:ns ## COG: MT2942_2 COG0526 # Protein_GI_number: 15842416 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Mycobacterium tuberculosis CDC1551 # 241 526 2 296 296 221 43.0 2e-57 MLSTLFIGFTGGLITGISPCILPVLPLVLAVSGGSRWRPWQVIGGLVTSFSLVTLFATTL LNALGLPADILWKVGIALLVLVGLGMVFPRVQEALEWPFQKLPKAGGLQAKARDKGGFVV GLAMGVVFVPCAGPVLTAISVAGATGTVDAHILLLCLSFALGVAIPLLAFALGGNEVGKR VDAFRSHQRGVRIAAGIVVIAMAGAISLGAPAWLQQKLPSINVDATPVEQDAPTAEGTPV PAFAGLTGWFNTDAPVDPRTSGKVTLIDFWAYACINCQRNNTHLTKLYAHYKDYGFDIIG IHAPEYAFEHEADNVRRAAREQGIEYPVAQDNDFATWKNFGNRYWPAHYLVDKHGMLRQS HHGEGDYAETERLIRELLLERDPSIALPEPIEAADANSAPRSPETYLGTARAQYFTNPDY HDGTHQFTTSEPPLGQYSLGGTWTLADQPITAGPHARLRLNYRAAWVQLVTSGSGTVRVH RADGSVRTFDITQDGTVDLVREPDNHTETIELEVSEGLSLYSFTFG >gi|227860859|gb|ACLH01000061.1| GENE 37 42177 - 42791 634 204 aa, chain + ## HITS:1 COG:MT0810 KEGG:ns NR:ns ## COG: MT0810 COG2220 # Protein_GI_number: 15840201 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Mycobacterium tuberculosis CDC1551 # 1 190 1 202 212 100 33.0 1e-21 MKISLHGQSAVAVEAPQGRIVIDPGPLSDLSCLEGAEAVLLTHAHGDHLDVDAVRASGLP VWGTQEAINAIGSGTAVHAGETFTVLGLEIHAVGGLHEEIHPNIPRPENLGYFFGGVLHP GDQWCVPKGRTVNVLLLPIAGPWVRGADAADYAMRIGARVTVPIHDAVLSDAGKQITDGM LQRAGVTGYQRPQVGESIDIQQAP >gi|227860859|gb|ACLH01000061.1| GENE 38 42929 - 44248 1832 439 aa, chain + ## HITS:1 COG:Cgl0634 KEGG:ns NR:ns ## COG: Cgl0634 COG2873 # Protein_GI_number: 19551884 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Corynebacterium glutamicum # 4 438 3 437 437 650 74.0 0 MSTKYDNSEVNEWSFATRALHAGQNLDGSTNARNVPIYQTTSYVFNDAEHAANRFNLSDA GPIYTRLTNPTQDALEERLASLEGGVAAVAFASGQAAETAAILNLASAGDHIVTSPRLYG GTSTLFTVTLKRLGIDVTLVENPDDPASWQDAVQPNTKAFYGETFGNPVADVLDIPAIAE VAHKNQVPLIVDNTIATGALARPLELGADIVVVSTTKFYTGNGSAIGGAIIDGGSFDWTV ERDGEPVFPYFVTPDKAYHGLKYADLGAPAFAIKARAGLLRDTGAAISPFNAWLTLNGIE TLQLRVEKHNANAQAVAEYLESHAKVTTVNYAGLDSSPYKATKEKLGYAYTGSVLSFDID GGREEAWAFIDALQLHSNLANIGDTRSLVVHPATTTHSQSDEAALKAAGITQATVRLSVG IEDVKDIIADLERGFAAIG >gi|227860859|gb|ACLH01000061.1| GENE 39 44241 - 45395 984 384 aa, chain + ## HITS:1 COG:Cgl0633 KEGG:ns NR:ns ## COG: Cgl0633 COG2021 # Protein_GI_number: 19551883 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Corynebacterium glutamicum # 5 384 1 377 377 523 66.0 1e-148 MVSAVPELAPEGELAVVPIGDFTTEAGAVLADAHVAYQRWGAFAGDPDGVNNVLVVEHAL TGDSNVADWWSDLVGPGKALDTTRWCVIATNALGGCNGSTGPKSLHPDGKPWGGRFPALS IRDLVEAEHDCLKELGISRVHAVLGGSMGGARTLEWSLLHPESVSAVCVIAVSARASGWQ IGIQSAQISAIERDPFWHGGNYYLTDKTPRDGLAAARRIAHLTYRGEQEIDERFGATAQQ GENPLGPHRQLNQRFAVNSYLDYQGAKLTERFDAGSYVVLTEALNRHDVGRGRGGLIKAL AASQVPTMVVGVDTDILYPYHQQEHISRNVNQLLAMAKIVSPVGHDAFLTETRQMNRILR NFLLLSAPNGLDVGPAYVGDEYYI >gi|227860859|gb|ACLH01000061.1| GENE 40 45430 - 45744 302 104 aa, chain - ## HITS:1 COG:no KEGG:cauri_0511 NR:ns ## KEGG: cauri_0511 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 104 37 140 140 186 99.0 4e-46 MSLANPHDAHLKPSALPSAIQWLAIGLFVVAVVVSGFYAVFEHWRRATLLLGGALMWLAV VRLTCDSSRVGVLAVRSRRFDACFTGILGAAMAFLAFSIDALGS >gi|227860859|gb|ACLH01000061.1| GENE 41 45877 - 46731 1048 284 aa, chain - ## HITS:1 COG:Cgl0629 KEGG:ns NR:ns ## COG: Cgl0629 COG0190 # Protein_GI_number: 19551879 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Corynebacterium glutamicum # 1 283 1 283 284 479 87.0 1e-135 MSATKLDGNLYRDEIFEDLAQRVAALKEKGITPGLATVLVGDDPGSHSYVKMKHRDCEKL GINSIRKDLPADVSQEELERVIEELNNDDACTGYIVQLPLPKHLDENRVLELIDPAKDAD GLHPINLGKLVLNEEAPLPCTPNGCIHLLRRFGVELDGAKVVIIGRGVTVGRPIGLMLTR RSENSTVTLCHTGTKDLAAETREADVIIAAAGKAHMLTADMVKEGAAVLDVGVSRVDGKL AGDVAEDVWEKAGYVSPNPGGVGPLTRAFLVSNIVERAEKLAAQ >gi|227860859|gb|ACLH01000061.1| GENE 42 46756 - 47226 458 156 aa, chain + ## HITS:1 COG:Cgl0628 KEGG:ns NR:ns ## COG: Cgl0628 COG0219 # Protein_GI_number: 19551878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Corynebacterium glutamicum # 4 156 6 157 157 213 66.0 1e-55 MSSLHIVFDNPVIPTNTGNAIRTAAVTGASLHLIEPLGFNFEDKHLKRAGLDYHDLADLK IHKDFDACMEALPDARVFAFTTHTEKWFTDVEYQEGDVLLFGTEPTGLPEEHAFHPRVTE RVRIPMMPARRSMNLSNAASTAVYEAWRQLGFRGAV >gi|227860859|gb|ACLH01000061.1| GENE 43 47274 - 49145 1607 623 aa, chain + ## HITS:1 COG:Cgl2847 KEGG:ns NR:ns ## COG: Cgl2847 COG0469 # Protein_GI_number: 19554097 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 1 618 9 617 619 566 50.0 1e-161 MPSLRPLLDSLTTRVEASSAAHAAQIARVDPVHRPGAVNLVRYMELRSQDAVELQEGLTA LGATSLSHPEPAVLERLHAARNVLDAFDGQAPTYPVQPIATAYADADDILDANTEALLGP TQEDTHARIMVTLPTEAAEDYELVLGFARAGMELARINCAHDDQAAWAKMVEHVHRAAEE VGREILISCDIAGPKVRTGSIEPGPQVIRVRGERTAAGELLSPATLVLHDAPSSTRAHGV AGEASPSAARPAVALEVDGEWLARLYPGSEVRFTEARGRSRVFTVESVEVGVAVLHGERN CYLAEGTVLNHGGEITRVHGVPALEQKIRLHRGEELVLSTSAEPARIVEGEVTTIGCTLP EVVGALEVGHRVIFDDGAIAGRVREVRENGAAREAVVTVEHAGPTGTNLAAYKGINLPDT DVPLPSLTEEDIEALRFVATHCDIAAVSFIRTPADVAFLYDTLEEIAAEQESEEMAQRVR DLGIVLKIETVPAYEQLGSVLLEGMRHAKFGIMIARGDLAVELGFEQMVQVPGRIMKVAE AAHIPVIMATQVLETLAKTGLPSRAEITDAGYALRAECVMLNKGPHITEAIQILDRMSRK LGQSRLKNRQRLRQVSSWTNPLA >gi|227860859|gb|ACLH01000061.1| GENE 44 49283 - 49531 277 82 aa, chain + ## HITS:1 COG:no KEGG:cauri_0507 NR:ns ## KEGG: cauri_0507 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 82 1 82 82 131 100.0 1e-29 MKLSECPRQTADAIPVGCTITLRAECISCTCDAALAVRLGELGIRPGATLTMGPRVAGGA RVVSVGSCRYAIDKATLQAIEV >gi|227860859|gb|ACLH01000061.1| GENE 45 49535 - 51469 1789 644 aa, chain + ## HITS:1 COG:lin2209 KEGG:ns NR:ns ## COG: lin2209 COG0370 # Protein_GI_number: 16801274 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Listeria innocua # 26 644 8 664 664 361 34.0 3e-99 MATTKPSCHGDPGGAVAPAGAPIIALVGSPNSGKSTLFNALTGAKAQTGNWPGTTVEVSR GAWKLGESTADLIDFPGTYSLDPLSPDEALTRAMLIDCPDDERPDAVVVVVDASAVARGL NVALQLAEQPYRLIIALTKTDVALNQGQTVDPVALAEATSIPVVVVDGRKREGVEKLREV VVDSLVAEPVRLREDTGLEGRFAELDAAAKASVSEVEHATPLSHRLDAVALHPVVGPLLF LAVMWLVFQITTTVAAPLQDGLETLISGPLSDWARAGLGAIGLGHPLITGLLVDGLIGGV GMVLTFAPLMALMFLCLAVLEDSGYMARAAVVTDRLMRAIGLPGKAFIPIVVGFGCNVPA ISATRVLGSPRHRIMTALLIPFTSCSARLVVFVMLSATFFPEHAGSVVFIMYVISIALLV LVGLALRKTLWRAVPEEALVIDLPTYQLPTARLALSVMWTRLKGFLQTAGGIIVSTVVVV WLLMAIPVGAAVHETTLGEPPAPEDSAYGAVSRTIAPAFAPAGFDSWSLAGPLVTGFVAK EALISTWAQTYAVDDVTDASAEEQSHSALSDRVRQDFDRASGGHPLAAVWAYMLFLLAYT PCVATIAAQRREIGWRWTLFGFGIQLATAWVLAVAAFQILRVFI >gi|227860859|gb|ACLH01000061.1| GENE 46 51469 - 51729 128 86 aa, chain + ## HITS:1 COG:no KEGG:cauri_0505 NR:ns ## KEGG: cauri_0505 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 133 100.0 2e-30 MSASPIHAVQQAIESGVRSRVAIAAQTGLEPGTVDVILDHLTASGVLDMEPLGSCPAGGC GSCSAASACAGPSSTRGPVLLKLRRR >gi|227860859|gb|ACLH01000061.1| GENE 47 51710 - 53110 1475 466 aa, chain - ## HITS:1 COG:Cgl0622 KEGG:ns NR:ns ## COG: Cgl0622 COG3428 # Protein_GI_number: 19551872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 10 459 5 464 471 376 46.0 1e-104 MKDRALIDADGYTRVHRLTPLLRFWSLILALVAVLAVNVNASMVSDVLSYVQGGHLGEVG RGTLLGIGAFVLVCTVIWLVSGIWWRKLGYKLTEDEIALRHGVISTSFRSARYERIQAVD VVESIIARLLGLAAVRVETAGGSSSVIKIEYLSKAKAEELRAELLRRTNKGSASEPAPET PAALIPEIPILRTIAAEALRLPTLVTALVIGGLLFLPGMWTALLPIIVGFVGRVWSLVDS SWTFTALHDAPANALNVSYGLADRRRQTIRISRIHGVRVSQPFLWRRFGWYEVHVSVAGY GAKGGGKQSGSTRILPVGTREQALELLALISDLDRAQIEDYARPEGHTQPTYTSPRRATW VSPVDRKQQSVTLVDSPLPVTIVHRGRINRRVMVIGTPHIQELTLKVGPLGHLAGVRTVR FDLVAGPVKMAGQDLTPADASELLTRLRSRRLPALESAPAPSGDEA >gi|227860859|gb|ACLH01000061.1| GENE 48 53107 - 53556 501 149 aa, chain - ## HITS:1 COG:Cgl6021 KEGG:ns NR:ns ## COG: Cgl6021 COG3402 # Protein_GI_number: 19551871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 149 1 149 149 179 64.0 1e-45 MNPVSPSLTKARYITNLSWDIILAALAAAAAYFWWDWLYWVAGALVAWALYELWLIPAQV KNLGWQETADELLVTRGKIWHTFTVVPYGRIQFVDVTAGPVERAMGLKKVKLHTASPSSD ATIPGLLAADADALRERLAVKARERMSGL >gi|227860859|gb|ACLH01000061.1| GENE 49 53615 - 53875 231 86 aa, chain + ## HITS:1 COG:DR2259 KEGG:ns NR:ns ## COG: DR2259 COG1476 # Protein_GI_number: 15807250 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 1 86 1 79 82 74 43.0 5e-14 MSPKKKPTRPLFNRVRVLRVERDMTRAQLAAAIGVNPQTIGALERGDHSPSLDLAFNICE VFDLPVEAVFSRNEFTPMSSEIYRKG >gi|227860859|gb|ACLH01000061.1| GENE 50 53883 - 54353 595 156 aa, chain + ## HITS:1 COG:no KEGG:cauri_0501 NR:ns ## KEGG: cauri_0501 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 156 1 156 156 259 100.0 3e-68 MSAPIPDSVKTRKRYSTLADLSTALIIASIPLQFWSAFTSLMVAALGTLLCALMTARLRT TINAADLPGTELDEYQMQQHLEARDDGLKFSLTALVILLPVTGLIAWGARAMPIMDGAFV SQLYLKIILLLIVWVPFSVARSLAGKMNRDELISKE >gi|227860859|gb|ACLH01000061.1| GENE 51 54359 - 57259 2483 966 aa, chain - ## HITS:1 COG:Cgl0620 KEGG:ns NR:ns ## COG: Cgl0620 COG0587 # Protein_GI_number: 19551870 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Corynebacterium glutamicum # 1 966 92 1055 1055 1357 69.0 0 GIALVDRDGFYGLMKFAEAAAKVGLPAVFGAELSLDPAPLTVLARTPEGYRRLSRLISRA HMEAGEKGVVSYPSLAEIGAQLQDECLFLVGWEWVEHFDLLVDGIKIDSMVLEYACTQLP EDADHHLLMDSLPVPRAIATARPAAAAREHARLAGAKQALSRRLALADASPNSHPMGSSW LRSGEQMARLLPERPELIAETVRVLEECSFTWEALAPNLPDFDVPEGHTEMSWLEHLTFE RAAARYATRPKEIRERAWEQMRYELGVVKQLGFPGYFLIVCDLVDFCKRENILCQGRGSA ANSAVCFALGITNAEPISAGLLFERFLSPDRDGPPDIDIDIESGRREEVIQYVYAKHGRE RAAQVANVITYRRKGALRDAARALGYPQGSADAWSKGIAPAPSDVESLADQFLGQPRHLG IHSGGMVLCDRPIADVVPVEWARMENRSVLQWDKDDCAAAGLVKFDLLGLGMLEALHHMM DLVEESTGRMVNLWELDLADSEVYDMLCRADAVGVFQVESRAQLSTLPRLKPRVFFDLVV EVALIRPGPIQGGSVHPYLRRRDGKEPVTYDHPVLEKSLGKTLGIPLFQEQLMQIAVDAA GFSGAEADDLRRAMGSKRSPAKMAALKQRFYEGLEETNGIVGEVADKLWAKIVAFAAYGF PESHSQSFASLVYFSAWFKRYYPAQFCVGLLRAQPMGFYSPQSLIQDARRHGVEVLPVSV NESGREARVVVGADGQTRIRLGLNLIKGLGDKAADRIEAAAPFAGVPDLSRRADLTVDHV EALAVAGALDVFGVDRRQALWQAGVAATERAGMLPGLSAIEAPFLPGMSAFELMAADVAS TGVTHNQQPMEQVRGELQSRGILAAADLPGVEDGTRVRIAGVVTHRQRPQTAGGVVFFGL EDETGLMNVMVSPGLWARDKVTARTAPALIVRGIVQNASGAVTVAADQLEPLAFGEALSR GSRDFR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:41:14 2011 Seq name: gi|227860858|gb|ACLH01000062.1| Corynebacterium aurimucosum ATCC 700975 contig00130, whole genome shotgun sequence Length of sequence - 7107 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 243 216 ## COG0587 DNA polymerase III, alpha subunit + Prom 209 - 268 2.7 2 2 Op 1 3/0.000 + CDS 408 - 1307 1559 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 3 2 Op 2 10/0.000 + CDS 1347 - 2252 1349 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 4 2 Op 3 32/0.000 + CDS 2360 - 3403 1426 ## COG1135 ABC-type metal ion transport system, ATPase component 5 2 Op 4 . + CDS 3400 - 4080 935 ## COG2011 ABC-type metal ion transport system, permease component + Term 4144 - 4202 19.6 6 3 Tu 1 . - CDS 4077 - 4619 414 ## COG4759 Uncharacterized protein conserved in bacteria containing thioredoxin-like domain 7 4 Tu 1 . + CDS 5023 - 5715 730 ## cauri_0494 putative secreted protein + Term 5765 - 5803 3.7 - Term 5544 - 5575 0.0 8 5 Tu 1 . - CDS 5721 - 7082 942 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair Predicted protein(s) >gi|227860858|gb|ACLH01000062.1| GENE 1 3 - 243 216 80 aa, chain - ## HITS:1 COG:Cgl0620 KEGG:ns NR:ns ## COG: Cgl0620 COG0587 # Protein_GI_number: 19551870 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Corynebacterium glutamicum # 1 78 6 90 1055 67 48.0 5e-12 MRFNGGEALPWSRVERILSGRPGPVPVSVDHLPQATDAPKVGHSAVPFAELHAVSSYSFL RGASEPEELVARAVDLGLWG >gi|227860858|gb|ACLH01000062.1| GENE 2 408 - 1307 1559 299 aa, chain + ## HITS:1 COG:Cgl0619 KEGG:ns NR:ns ## COG: Cgl0619 COG1464 # Protein_GI_number: 19551869 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Corynebacterium glutamicum # 1 296 1 293 299 297 56.0 2e-80 MSIRRVLAATSAAVIAATGLVACSSDSSDSAESENSGEAITKDSTITIGTTDANMEEWAV FQDLAKEAGFDVKLENFSDYNTPNQALDQGKLTTNKFQHLKFLAEYNKGNGTDLVPLAAT EIYPLAIYWKDHKDLADIEGQEVAIPNDSTNQGRAIGLLVQEGLVTLKEGSPLTPTPLDI DEKKSKVKVTPVDAAQTPAAYGEGKPAVINNSFLERAGIDPQSAVAQDDPDSTEAEPYIN VWAVRADDADNETLHELAELWKDQKVTDAVLKSSGDTAVAVDRSQEELQEILERLEEQV >gi|227860858|gb|ACLH01000062.1| GENE 3 1347 - 2252 1349 301 aa, chain + ## HITS:1 COG:Cgl0619 KEGG:ns NR:ns ## COG: Cgl0619 COG1464 # Protein_GI_number: 19551869 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Corynebacterium glutamicum # 1 301 1 299 299 285 52.0 6e-77 MRIRRLVAAAAASLVAATSLVACSSASSDFAAGTAEDPIIVGTTDAELPEWGVLKELAAK EGIEIEMKSFTDYATPNQSLAEGSTDTNKFQHLKFLAEYNVGNGTNLVPVASTQVYPMPL FWKGHDSIDGIEGQDIAIPNDATNQGRAINLLAANGLLVLKEEGKLTPDPADIDEAASKV SITPVAASQTPSAFGEGKPAIITNSFFKRAGINPADAVLYDDPENPNADPKILFDPYVNV WAVQEKDKDNEKVKKLAELYLSDEVKAAVQDTTGGTTIFVDKPQAELQEILERLEEEASS S >gi|227860858|gb|ACLH01000062.1| GENE 4 2360 - 3403 1426 347 aa, chain + ## HITS:1 COG:Cgl0618 KEGG:ns NR:ns ## COG: Cgl0618 COG1135 # Protein_GI_number: 19551868 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Corynebacterium glutamicum # 2 333 14 346 360 492 76.0 1e-139 MTEQQGAHRGTRIEFRNITKVFKNKKTTTTALDDVSLTVEPGEIIGIIGFSGAGKSTLVR MINGLDKPTSGQLLLDGTDVVPLPESKLRGIRRNIGMIFQQFNLMSSRTAAGNIEYPLKL QGVDKQERKKRVQELLEFVGLADKGDNYPEQLSGGQKQRVGIARALANNPSLLLADEATS ALDPTTTHEVLDLLRKVNRDLGITIVVITHEMDVVRSIADKVAVMESGRVIEAGSVYEVF SNPQTKVAEKFVATSLRNTPDVVEADDLLAHEGRLFTINLTEKSGFFGAAGKLADKGVSI AVVHGGITTLQKHSFGKITVRLNGPDAAIEDFYAHMQRTTDIEEIQR >gi|227860858|gb|ACLH01000062.1| GENE 5 3400 - 4080 935 226 aa, chain + ## HITS:1 COG:Cgl0617 KEGG:ns NR:ns ## COG: Cgl0617 COG2011 # Protein_GI_number: 19551867 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Corynebacterium glutamicum # 1 226 1 225 225 219 71.0 2e-57 MNVTYLAQANWDRLGSTLVDAIKDTLIMVATTLVLAGIIGLVLGILLYTTRPGGILQNKP IHFVINILVNFVRPIPFIILLAFVQPLTVAVLGSSIGREPATFVMVIAATFAVARIVEQN LVALDPGVIEAARAMGASPWKIITTVIIPEALGPLVLGYTFLFIGIVDMSAMAGYVGGGG LGDFAIVYGYRAFEWEVTVVATLIIIVLVQAAQFFGNWLSAKIMRR >gi|227860858|gb|ACLH01000062.1| GENE 6 4077 - 4619 414 180 aa, chain - ## HITS:1 COG:Cgl0602 KEGG:ns NR:ns ## COG: Cgl0602 COG4759 # Protein_GI_number: 19551852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein conserved in bacteria containing thioredoxin-like domain # Organism: Corynebacterium glutamicum # 1 167 121 282 287 167 52.0 1e-41 MLVCTHAKRDACCAIKGRPLAASLACEFEETVWETSHTKGHRFAPSVLLMPWGYSFGRLN VDAGRELVGKALHGEYFYPANRGSGLTTPQGQVAELAVARQLLDASETLHYGDLTVDAVD AARNGVVVRHRDGRAWDVELEEKEASGIVSSCGDEPKTSSYFAARRVRILRAASQDAARG >gi|227860858|gb|ACLH01000062.1| GENE 7 5023 - 5715 730 230 aa, chain + ## HITS:1 COG:no KEGG:cauri_0494 NR:ns ## KEGG: cauri_0494 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 230 5 234 234 372 100.0 1e-102 MHIIPRSATTLEVMPKHNLLRTAAPVAALVVSGALALQGCAPSSSPDGSSDGPTKTLDAT LSGASTSTATVTPTAPSPAAPAGLTPLGDANLEMKTLRPPAPSELVVTDVRVGKHEGFDR VVFEFVGDGSPGWFIDYTDAPAQQGSGNPIAYEGSTALDVSIDGTAYPFQLDMEDPNIGT IKGAGGLVTQVVSSGTFEARSQFVIGLNERHPYSVQVLRAPTRLVIDILN >gi|227860858|gb|ACLH01000062.1| GENE 8 5721 - 7082 942 453 aa, chain - ## HITS:1 COG:Cgl0600 KEGG:ns NR:ns ## COG: Cgl0600 COG0389 # Protein_GI_number: 19551850 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 3 452 66 526 526 432 56.0 1e-121 MEEANPDRDGVVFAEIAAGLDAVASSVEVLRPGLVIVDAGAAGRFHGSEAKAVEMLVDAT ARSHLDATVGVADEIATALIAARHRNLGAVVPAGQSREFLAQQPVGVLAAEVALGCAADV VHALEQLGVRTLGELASLPLRQVTTRFGEAGRRCHAVAAAAPDRRVTPELARPDLGVEQG FEEPLERVDAAAFAARQLAARLHGALEEAGVVCLRLRVAAEFEGGERLERIWRTQKALSE AATADRVRWQLDGWLSAARAGSAPGEGGGIVKLALEPVEVAPPGDGLLWGAGESAEQAKR VIARVQSQLGVDRVLQPRPAAGRGVAERIEYVPYGEQRDPQPEGTWPGRIPAPLPASLAH PAARIRLIDSSSKDIIVTAEALLSGEPAGLGWGRHRYRVTGWAGPWPVDSEWWEAGAAQR CARLQVVGENDKGQRAWLLVWAGGRWSVEATYA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:42:06 2011 Seq name: gi|227860857|gb|ACLH01000063.1| Corynebacterium aurimucosum ATCC 700975 contig00131, whole genome shotgun sequence Length of sequence - 68458 bp Number of predicted genes - 76, with homology - 76 Number of transcription units - 34, operones - 19 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 193 - 783 241 ## cauri_0492 hypothetical protein 2 2 Tu 1 . + CDS 834 - 1244 505 ## cauri_0491 hypothetical protein 3 3 Op 1 19/0.000 - CDS 1253 - 1906 695 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 4 3 Op 2 . - CDS 1909 - 3057 950 ## COG4585 Signal transduction histidine kinase - Prom 3161 - 3220 1.7 5 4 Op 1 . + CDS 3171 - 4226 1073 ## COG1983 Putative stress-responsive transcriptional regulator 6 4 Op 2 . + CDS 4238 - 5356 1132 ## COG2008 Threonine aldolase 7 4 Op 3 . + CDS 5390 - 6601 814 ## cauri_0486 hypothetical protein 8 5 Tu 1 . + CDS 6802 - 7038 124 ## gi|262183829|ref|ZP_06043250.1| hypothetical protein CaurA7_07548 - Term 7137 - 7171 1.6 9 6 Op 1 1/0.429 - CDS 7196 - 8764 2193 ## COG0519 GMP synthase, PP-ATPase domain/subunit 10 6 Op 2 . - CDS 8789 - 9715 884 ## COG0583 Transcriptional regulator - Prom 9748 - 9807 2.9 + Prom 9694 - 9753 1.9 11 7 Tu 1 . + CDS 9781 - 10785 1045 ## COG5006 Predicted permease, DMT superfamily 12 8 Op 1 6/0.000 - CDS 10847 - 12043 1523 ## COG0516 IMP dehydrogenase/GMP reductase 13 8 Op 2 . - CDS 12053 - 13567 2054 ## COG0516 IMP dehydrogenase/GMP reductase 14 9 Tu 1 . + CDS 13734 - 14090 523 ## cauri_0480 hypothetical protein + Term 14125 - 14185 15.2 - Term 14119 - 14167 9.3 15 10 Tu 1 . - CDS 14177 - 15007 842 ## cauri_0479 hypothetical protein - Prom 15027 - 15086 4.1 16 11 Tu 1 . - CDS 15115 - 15732 569 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 15898 - 15957 4.0 + Prom 15888 - 15947 3.2 17 12 Tu 1 . + CDS 16128 - 16427 368 ## cauri_0477 WhiB transcriptional regulator 18 13 Tu 1 . - CDS 16469 - 17056 602 ## COG0178 Excinuclease ATPase subunit 19 14 Op 1 41/0.000 - CDS 17428 - 19044 1404 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 20 14 Op 2 . - CDS 19063 - 19356 562 ## COG0234 Co-chaperonin GroES (HSP10) 21 15 Op 1 . - CDS 19504 - 20778 846 ## cauri_0473 hypothetical protein 22 15 Op 2 . - CDS 20762 - 21367 330 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 21315 - 21374 3.1 23 16 Op 1 5/0.000 + CDS 21480 - 22610 646 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 24 16 Op 2 . + CDS 22607 - 23242 438 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 23156 - 23185 2.1 25 17 Op 1 . - CDS 23277 - 23705 585 ## cauri_0469 hypothetical protein 26 17 Op 2 9/0.000 - CDS 23784 - 24833 726 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 27 17 Op 3 20/0.000 - CDS 24827 - 25342 169 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 28 17 Op 4 . - CDS 25339 - 26031 426 ## PROTEIN SUPPORTED gi|15827107|ref|NP_301370.1| putative acetyltransferase 29 17 Op 5 . - CDS 26031 - 26600 740 ## cauri_0465 hypothetical protein 30 17 Op 6 1/0.429 - CDS 26695 - 28287 1753 ## COG2985 Predicted permease 31 17 Op 7 3/0.000 - CDS 28289 - 28753 447 ## COG0802 Predicted ATPase or kinase 32 17 Op 8 . - CDS 28743 - 29840 908 ## COG0787 Alanine racemase 33 17 Op 9 . - CDS 29872 - 31743 2514 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 31791 - 31850 1.6 + Prom 31768 - 31827 2.5 34 18 Tu 1 . + CDS 31861 - 32682 896 ## cauri_0460 hypothetical protein + Term 32735 - 32788 17.1 - Term 32683 - 32744 3.1 35 19 Tu 1 . - CDS 32756 - 32974 201 ## gi|262183856|ref|ZP_06043277.1| hypothetical protein CaurA7_07683 36 20 Op 1 . - CDS 33333 - 34967 179 ## PROTEIN SUPPORTED gi|167042352|gb|ABZ07080.1| putative ribosomal protein L31e 37 20 Op 2 . - CDS 34976 - 35287 189 ## gi|227505262|ref|ZP_03935311.1| hypothetical protein HMPREF0308_1532 38 21 Tu 1 . + CDS 35201 - 35422 115 ## cauri_0458 hypothetical protein - Term 35376 - 35408 5.4 39 22 Op 1 4/0.000 - CDS 35429 - 36772 1776 ## COG1109 Phosphomannomutase - Prom 36825 - 36884 2.8 - Term 36877 - 36919 9.0 40 22 Op 2 59/0.000 - CDS 36945 - 37481 890 ## PROTEIN SUPPORTED gi|227832284|ref|YP_002833991.1| 30S ribosomal protein S9 41 22 Op 3 4/0.000 - CDS 37481 - 37963 838 ## PROTEIN SUPPORTED gi|227832283|ref|YP_002833990.1| 50S ribosomal protein L13 - Term 38309 - 38350 -1.0 42 22 Op 4 4/0.000 - CDS 38360 - 38647 448 ## COG4842 Uncharacterized protein conserved in bacteria 43 22 Op 5 . - CDS 38718 - 39035 455 ## COG4842 Uncharacterized protein conserved in bacteria 44 23 Op 1 . - CDS 39215 - 40345 737 ## cauri_0452 hypothetical protein 45 23 Op 2 . - CDS 40342 - 44070 2750 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 46 24 Op 1 . + CDS 44200 - 45531 913 ## cauri_0450 hypothetical protein 47 24 Op 2 . + CDS 45528 - 46703 366 ## COG1404 Subtilisin-like serine proteases 48 25 Op 1 . - CDS 46663 - 47922 994 ## cauri_0448 hypothetical protein 49 25 Op 2 4/0.000 - CDS 47978 - 48838 691 ## COG0101 Pseudouridylate synthase - Prom 48915 - 48974 2.3 - Term 49003 - 49057 17.2 50 26 Op 1 50/0.000 - CDS 49075 - 49554 782 ## PROTEIN SUPPORTED gi|227832274|ref|YP_002833981.1| 50S ribosomal protein L17 51 26 Op 2 26/0.000 - CDS 49634 - 50644 1431 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 52 26 Op 3 36/0.000 - CDS 50714 - 51319 1031 ## PROTEIN SUPPORTED gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 53 26 Op 4 48/0.000 - CDS 51341 - 51745 692 ## PROTEIN SUPPORTED gi|227832271|ref|YP_002833978.1| 30S ribosomal protein S11 54 26 Op 5 2/0.000 - CDS 51749 - 52117 624 ## PROTEIN SUPPORTED gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 - Term 52246 - 52277 2.1 55 26 Op 6 1/0.429 - CDS 52302 - 52520 269 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 52634 - 52693 2.6 - Term 52666 - 52705 5.1 56 27 Op 1 1/0.429 - CDS 52744 - 53535 1137 ## COG1376 Uncharacterized protein conserved in bacteria 57 27 Op 2 12/0.000 - CDS 53588 - 54382 809 ## COG0024 Methionine aminopeptidase 58 27 Op 3 28/0.000 - CDS 54398 - 54943 807 ## COG0563 Adenylate kinase and related kinases 59 27 Op 4 . - CDS 54943 - 56268 1743 ## COG0201 Preprotein translocase subunit SecY 60 28 Op 1 4/0.000 + CDS 56649 - 57956 1854 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 61 28 Op 2 9/0.000 + CDS 57974 - 59197 1361 ## COG0277 FAD/FMN-containing dehydrogenases 62 28 Op 3 . + CDS 59204 - 59455 263 ## COG0277 FAD/FMN-containing dehydrogenases + Term 59649 - 59694 1.5 - Term 59564 - 59603 1.2 63 29 Op 1 48/0.000 - CDS 59645 - 60094 753 ## PROTEIN SUPPORTED gi|227832263|ref|YP_002833970.1| 50S ribosomal protein L15 64 29 Op 2 50/0.000 - CDS 60098 - 60283 307 ## PROTEIN SUPPORTED gi|227832262|ref|YP_002833969.1| 50S ribosomal protein L30 65 29 Op 3 56/0.000 - CDS 60287 - 60913 1051 ## PROTEIN SUPPORTED gi|227832261|ref|YP_002833968.1| 30S ribosomal protein S5 66 29 Op 4 46/0.000 - CDS 60954 - 61355 662 ## PROTEIN SUPPORTED gi|227832260|ref|YP_002833967.1| 50S ribosomal protein L18 67 29 Op 5 55/0.000 - CDS 61359 - 61895 900 ## PROTEIN SUPPORTED gi|227832259|ref|YP_002833966.1| 50S ribosomal protein L6 68 29 Op 6 . - CDS 61910 - 62395 809 ## PROTEIN SUPPORTED gi|227832258|ref|YP_002833965.1| 30S ribosomal protein S8 - Prom 62548 - 62607 3.5 69 30 Op 1 . + CDS 62605 - 62853 347 ## cauri_0427 hypothetical protein 70 30 Op 2 . + CDS 62850 - 63701 841 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity 71 31 Tu 1 . - CDS 63670 - 64455 841 ## COG2116 Formate/nitrite family of transporters 72 32 Op 1 48/0.000 - CDS 64588 - 65139 940 ## PROTEIN SUPPORTED gi|227832254|ref|YP_002833961.1| 50S ribosomal protein L5 73 32 Op 2 57/0.000 - CDS 65141 - 65455 528 ## PROTEIN SUPPORTED gi|227505200|ref|ZP_03935249.1| 50S ribosomal protein L24 74 32 Op 3 . - CDS 65460 - 65828 594 ## PROTEIN SUPPORTED gi|227832252|ref|YP_002833959.1| 50S ribosomal protein L14 - Prom 65993 - 66052 1.9 + Prom 66261 - 66320 1.9 75 33 Tu 1 . + CDS 66363 - 66674 191 ## cauri_0421 putative transposase + Term 66682 - 66726 5.1 76 34 Tu 1 . + CDS 66910 - 67605 548 ## COG2801 Transposase and inactivated derivatives + Term 67762 - 67798 2.1 Predicted protein(s) >gi|227860857|gb|ACLH01000063.1| GENE 1 193 - 783 241 196 aa, chain - ## HITS:1 COG:no KEGG:cauri_0492 NR:ns ## KEGG: cauri_0492 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 11 155 1 145 220 247 100.0 2e-64 MGTMNQTGVRMVGGSQAEQIAVLRAQIQRLETPDDSAQVQPEAELLGVPEGLSELLPGGG LPRKQATACAECAALVVELISHVSAAGGHVGVVGWSDLSLAQVAEEGDISRVITVPDPGV EPWAVTGVLCEGLDLVVHKGTGELSPTRARPVLAKGGLAGSPAHRGDSAAGYGCGDRRGG RCGTWLGPGQRADSGS >gi|227860857|gb|ACLH01000063.1| GENE 2 834 - 1244 505 136 aa, chain + ## HITS:1 COG:no KEGG:cauri_0491 NR:ns ## KEGG: cauri_0491 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 136 1 136 136 191 100.0 8e-48 MNPLRAHTTPIPTPPWVRLGASLLAGAAVGAGSSRIHFGLALGLSLLFLLAACALVFLHP YRADLRDYAQRHNVTMLPNAAQLIPLMVLWLMVMLSPLLALPAWGSALVWVLVAGAAFLL FPHVDGSRKLAYAPPA >gi|227860857|gb|ACLH01000063.1| GENE 3 1253 - 1906 695 217 aa, chain - ## HITS:1 COG:Cgl0595 KEGG:ns NR:ns ## COG: Cgl0595 COG2197 # Protein_GI_number: 19551845 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 1 216 1 229 230 279 69.0 2e-75 MVKVFLVDDHSVFRAGVRAELAAAPEIEIVGDAGTVAEALEGIARTSPDVVLLDVHMPDG GGLAVINATANQPARPVFLALSVSDAAEDVIALIRAGARGYVTKNISGPDLAEAVVQVHS GDAYFSPRLAGFVLDAFASGSPAPEPEEGQDPAVDALTRRELEVLRLLARGYTYREIGKQ LFISVKTVETHASNILRKTQQSNRHQLTRWATSRDLA >gi|227860857|gb|ACLH01000063.1| GENE 4 1909 - 3057 950 382 aa, chain - ## HITS:1 COG:Cgl0594 KEGG:ns NR:ns ## COG: Cgl0594 COG4585 # Protein_GI_number: 19551844 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 39 380 1 350 352 272 49.0 7e-73 MTSPYVPAENAAPYPVMSRPQSGRVVAGVAAGLAQNLGVSALSVRIALTALTLLGGVGAM AYAGLWIFTPALDDAPSTRRSPLSLVLVFLALAGSAVGVLGVSGASLSVAVPLAVVAIGA VLAWLAYDRGLNTPVGLVAVAAGAVLVIGGVVVAAVTWESGSGSAILATALTLVGFGALV VPLVLKLWRSLSQEQAAKAVSEERAEIAARLHDSVLQTLALIQKRAGDSREVTRLARAQE RELRAWLFDAPSAAPTTCFGALEAACGEVEDLFDMRVSAVTVGEDTELTESAKLLIQAAR EAMVNAGKHAGVDVVDVYAELLAGELSIFVRDRGVGFDVDAVPADRHGIRDSIRARVEGT GGRVRISSTPGEGTEVELAVAL >gi|227860857|gb|ACLH01000063.1| GENE 5 3171 - 4226 1073 351 aa, chain + ## HITS:1 COG:Cgl0593_1 KEGG:ns NR:ns ## COG: Cgl0593_1 COG1983 # Protein_GI_number: 19551843 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Corynebacterium glutamicum # 6 72 32 97 97 91 62.0 2e-18 MTKNSTLNQMWTTRPVRLPKKQGGDAHIAGVCEGIAVRYQLDPTIVRVAFVVAALAFGGG IAAYLAAWALMPRFGSPYCPLDAALGKDGVKEEQELGWVLIIGVLLTFSSGPLFLSGQFL AGLPPATLTFGLLALAWYALHQREPLPPSGLLATEQPVREEPVNLNPYTPADGHPFPPGR RTPPSWDPLGVVPDAWDLPEPGPREEPKKKRGSQWAEAAITLGAVGAALTIAFFGGTFVI EADEESGFSARFNVGEQDIAPTHEDELEDYYDLGIGESTVDFSQLHELKDEHDVTVDAGI GAVEVILPKDIPVALTCDDGLGESNCTERQDPDALLNIHIDAGIGEVTVTG >gi|227860857|gb|ACLH01000063.1| GENE 6 4238 - 5356 1132 372 aa, chain + ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 368 1 341 341 286 41.0 5e-77 MIHFGNDYHRSAHPRVLEAIAGAGGAYAGYGADELCATAAERIRTACQAPNAEVHFMVGG TQANATIIAHRLRPWEGVIAADSGHIATHETGAIEHTGHKVITLPNQLGKITAAQVRACM KEYRASGVEEHMPEPALVYITQPTEFGTAYSRAELVALRAVCDEYELGLFVDGARLGYGL SASDITLPDLATLVDVFTIGGTKCGALFGEAIVFPAGAPRFRNAMKQNGGLLAKGWLLGA HFAALFSAPRASADALPGTNASYADASATTPDTEVTGTAATTLYEQICARANAQAQRIAE AFRAAGIDMLFDSPTNQQFALLTREQEEKLLQDFVCQFFEEHEGLRVVRFCTAWSTEEGD VDKLCAAISALK >gi|227860857|gb|ACLH01000063.1| GENE 7 5390 - 6601 814 403 aa, chain + ## HITS:1 COG:no KEGG:cauri_0486 NR:ns ## KEGG: cauri_0486 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 403 1 403 403 723 100.0 0 MQLGGYIQALARGLDVVEQCAGVTRAQLVQMGARPDFAEKLLGLHALYFGDTMFRSRQRK ARRTGHDVFTLLDIERYCSKLKARKAWELRQLLASTPREKIPMVAKAKLKEWRPPKDPAP GVRVTRRAGRNHTLSITDSSLNISKLLAVLKTTDKDLLTAAHTVFRGGGGSGQKLQSNVI VRLDELDRIVDGDGEEIELQLTNGATVTGAEFVREKLADVGLITLVHPHHGPVNLYMASR FANTKQRLALSAEHPTCAWPGCNAPAEDSQIHHLTRFQDGGPTNMSNLVPLCAYHNAVND DDPEKPTGRGRLDRIDGRVHYLPPWAGPPIPIESPAHPPRSAPAPATPAAPGSALSSGTR TAARTSTDPPTSDPPASRSGPPYGSGAGEPPHNSGEPPDPPPS >gi|227860857|gb|ACLH01000063.1| GENE 8 6802 - 7038 124 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262183829|ref|ZP_06043250.1| ## NR: gi|262183829|ref|ZP_06043250.1| hypothetical protein CaurA7_07548 [Corynebacterium aurimucosum ATCC 700975] # 1 78 6 83 83 124 98.0 3e-27 MRTNAVDTVNEHASGVRAHSMWAADVCSQVRQRHLKILVKLTSTVAMQTLYTAPRAELTA RNTGQLQGHQPHQQNVRG >gi|227860857|gb|ACLH01000063.1| GENE 9 7196 - 8764 2193 522 aa, chain - ## HITS:1 COG:Cgl0591_2 KEGG:ns NR:ns ## COG: Cgl0591_2 COG0519 # Protein_GI_number: 19551841 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Corynebacterium glutamicum # 201 522 1 326 326 558 89.0 1e-159 MTVTNPNTTPRPVLVVDFGAQYAQLIARRVREANIYSEVVPNSASVEDIKAKNPAALILS GGPSSVYADGAPALKPELLELGIPVFGICYGFQSMTQALGGTVASTGAREYGRTDMTVSG GVLHKGLEDTHKVWMSHGDSVSEAPEGFEVTASSEGAPVAAFECLSKKMAGVQYHPEVLH SPHGQEVLTRFLTEVAGLEQNWTAENIAEQLINDVREQIGEEGRAICGLSGGVDSAVAAA LVQRAIGDRLTCVFVDHGLLRAGEREQVEKDFVASTGAKLITADEREAFLNKLAGVTEPE AKRKAIGAEFIRSFERAVDQALDGQDAAFLVQGTLYPDVVESGGGDGTANIKSHHNVGGL PDDVEFELVEPLRLLFKDEVRAVGRELGLPEEIVARQPFPGPGLGIRIIGEVTEERLETL RQADLIARTELTNAGLDGEIWQCPVVLLADVRSVGVQGDGRTYGHPIVLRPVSSEDAMTA DWTRLPYDVLEKISTRITNEVKEVNRVVLDVTSKPPGTIEWE >gi|227860857|gb|ACLH01000063.1| GENE 10 8789 - 9715 884 308 aa, chain - ## HITS:1 COG:Cgl0590 KEGG:ns NR:ns ## COG: Cgl0590 COG0583 # Protein_GI_number: 19551840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 296 1 292 303 283 51.0 3e-76 MLDLHRLRILYELQRLGTVTAVAESLRYTHSAISQQLAQCEKDVGVALYEKVGRRVRLTE QGEILASYAERMLALADEAESQVIASTNAVRGTIKVTTFQTIMSSLVPRALTELAREYPD LRVQIIQREADGAMELLARREVDLILGEEYESDMPATDEHTHRELLLDDPLRLITPLTGP WSELRLEDFAACDGEIPFAMDPEEFLLGRFVHRLCRRHGFNPSVLYETPDPFLHAHLVRT GHAVAVISDLFLDEIEGVRVVALPGNPTRTLYTAVRAGREGHPALRAFREALGKAAATAK DFGPLPAV >gi|227860857|gb|ACLH01000063.1| GENE 11 9781 - 10785 1045 334 aa, chain + ## HITS:1 COG:Cgl0589 KEGG:ns NR:ns ## COG: Cgl0589 COG5006 # Protein_GI_number: 19551839 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Corynebacterium glutamicum # 9 282 7 280 301 244 52.0 2e-64 MDCMTNPFAVLCVIGSCISLQLGASLAIQLFPIGGPWGTASLRLLFAAVILLAIARPRVH TWSREKWISATMFGLTLGLMNGFFYAGIELVALGPAVTIEFLGPLLLAACLSRSLRDATC VALALLGMGLMGLDSFNGAPLDLRGVFFLLCAGAMWAAYILASKKAGALFSGADGLAMAF LIGSLVLLPVGGRGAVALASDPTLLLFALGTGVLASLIPYSLEFIALRKLAPNVFSILIA LEPVFAALFGWILLSQNVSQLKLAAIGLVVVASVLQTMAPARGRVVFRKVALRPRRLKKP RLQWFQKPRNSDTADAVSPTPNSESGTRTTETAK >gi|227860857|gb|ACLH01000063.1| GENE 12 10847 - 12043 1523 398 aa, chain - ## HITS:1 COG:Cgl0588 KEGG:ns NR:ns ## COG: Cgl0588 COG0516 # Protein_GI_number: 19551838 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 1 397 1 373 374 471 66.0 1e-133 MRDYVEIGVGREARRTYDLNQISLVPTRRTRSSKDVDTSWHIDAYTFEVPFVSAPTDALA TPEFVIEMGKQGGLGVINAEGLWGRHEDLEGAIARVTENFGDLSTLQELHAAPLNEELLA ERIAQVRDSGVTVAVRVSPQHARELAPVVIKAGAELLFIHGTLISAEHVQTGGEPLNLKE FIGSLDTPVIAGGVADYTTALHLMRAGAAGIIVGSGVNTNPETVGIDIPMATTIADVAAA RRDYLDETGGRYVHVLADGDIFTSADIAKAIACGADGVVLGPVLARAAEAGGKGWYWPST AGHPRFPRGLIEPIGVADSLLGTGTFGADAFDAAASGNAASGATEDASAGAPSLEVVLHG PSNEPLGELNLVGGLKRAMAKCGYTDLKSFQKVGLAVR >gi|227860857|gb|ACLH01000063.1| GENE 13 12053 - 13567 2054 504 aa, chain - ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 212 503 1 291 292 443 81.0 1e-124 MSHVHTGGDNPDKIALYGLTFDDVLLLPAESNVVPSEVDTSAQFTRNIRLGVPLASAAMD TVTEARMAIGMARQGGIGVLHRNLSAEEQAQQVEIVKRSESGMVTDPVTATPDMTIDEVD TLCARYRISGLPVVDKQGTLVGICTNRDMRFEADFSRKVSEIMTPMPLVVAKEGVSKEEA LELLSANKVEKLPIVDDANKLVGLITVKDFVKTEQFPNASKDASGRLLVAAGIGTGEESY QRAGQLVDAGVDVLVVDSAHAHNNRVLEMVSRVQKDFGDRIDVIGGNLATREAARDMIEA GADAIKVGIGPGSICTTRVVAGVGAPQITAIMEAAAVAGPAGVPVIGDGGMQYSGDVAKA LAAGADTVMLGSMLAGTTEAPGDIVVVQGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDR YFQADVKSEDKLVPEGVEGRVPFRGDIDAIVHQIVGGLRASMGYTGSANLAELKTKQFVQ ITAAGLKESHPHHLQQIVEAPNYR >gi|227860857|gb|ACLH01000063.1| GENE 14 13734 - 14090 523 118 aa, chain + ## HITS:1 COG:no KEGG:cauri_0480 NR:ns ## KEGG: cauri_0480 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 221 100.0 5e-57 MPRDPFADDPNDPASFLEEDEHVEPLSEEDRLAVIHDLAMVQEFARVLSPRGIDGIFFFC EDCEENHFYEWDIMASNMQATLAGQLAPVHEPGAEPDPMRYVPWDYAVGYLDGMDSRY >gi|227860857|gb|ACLH01000063.1| GENE 15 14177 - 15007 842 276 aa, chain - ## HITS:1 COG:no KEGG:cauri_0479 NR:ns ## KEGG: cauri_0479 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 276 1 276 276 372 100.0 1e-101 MAKKDQPQQGVAEQLQPLVDDDAFLTTLSEGTDPSDGGDELAGLLLELRGDVEKQMPPAP LIEGAEEEPEVISLGAARRRRSKPFMHGLIGAAAATLLIAGTGAVVVNAGPGSPLYGVNQ SLFGADDHDVSVVELAGTLDEMERRSAEGDMDGTRQLLEEARKMVDQAKREREAESPSAA KQQPRTTVTQTQTVEKPAPVEEQKPPEPETVTQTETAVSTVVVTRTVSAGNPLEPPTQSQ PEPSQPGGGDQATPPQNDNSDGTGDSGQLPPPQFQQ >gi|227860857|gb|ACLH01000063.1| GENE 16 15115 - 15732 569 205 aa, chain - ## HITS:1 COG:Cgl0584 KEGG:ns NR:ns ## COG: Cgl0584 COG1595 # Protein_GI_number: 19551834 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Corynebacterium glutamicum # 20 203 3 186 188 236 71.0 3e-62 MAVATHATGAGGSSTAAKRDSDKELADLVPLAVDGSRCALQRIMRIIHPQVLRYCRARIG GHRQPTAEDVAQEICLAVATSIGTYKDKGRPFMAYVYGIAAHKVTDAHRALSRDHTHPTE DLPEDAAQDATPEESALEVDGSNRVRAMLDTLSDKARDIIILRVFVGLSAEETAEIVEST PGAVRVAQHRALAQLRKSLDSHETS >gi|227860857|gb|ACLH01000063.1| GENE 17 16128 - 16427 368 99 aa, chain + ## HITS:1 COG:no KEGG:cauri_0477 NR:ns ## KEGG: cauri_0477 # Name: whiB3 # Def: WhiB transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 99 1 99 99 198 100.0 5e-50 MSQPFLLPGPNTDFWDWQLHGACRGENSDVFYHPDGERGRARAQRENRAKAICHTCPVIE MCREHALASGEPYGVWGGMSESERVVALRSRRTHATVGA >gi|227860857|gb|ACLH01000063.1| GENE 18 16469 - 17056 602 195 aa, chain - ## HITS:1 COG:Cgl1061 KEGG:ns NR:ns ## COG: Cgl1061 COG0178 # Protein_GI_number: 19552311 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Corynebacterium glutamicum # 14 191 602 775 780 162 48.0 3e-40 MRVFVERAVVFVACPECQGTRLAQHSRESYLNGVSIAEVCGMELADAAAWLRTINSPLAV APLCGLEAALDLGLGYLTLGQPLSTLSGGERQRLKLAVRLCDRKATADIIVLDEPTVGRH HKDIDALLCLFDTLVDAHLTLICVEHHRAFLAHADHIIDLGPGAGSAGGEVVAACSPREF LGTDTLTARYLTQAL >gi|227860857|gb|ACLH01000063.1| GENE 19 17428 - 19044 1404 538 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 3 528 4 530 547 545 53 1e-154 MPKLIAFDQEAREGIQRGVDTLADAVKVTLGPRGRNVVLSKAFGGPTVTNDGVTIARDID LDDPFENLGAQLVKSVAVKTNDIAGDGTTTATLLAQALVFEGLRNVAAGANPVELNKGIA AAAEKVVEELKKRATPVNSSAEVSQVATVSSRDAEVGEMVAGAMDKVGKDGVVTVEESQT IESTVDVTEGISFDKGYLSPYFATEEETYNAVLDDAAILLVRNKISSLPDFLPLLEKIAE SSRPTLIIAEDIEGEPLQALVVNSIRKVLKVAAVKSPYFGERRKGFMDDLAVVTGATVVD PEVGINLKEVGPEVLGSARRVTVSKEDTVIVDGAGTAEAVEERREQIRREIERTDSTWDK EKLEERLAKLSGGVAVIRVGAATETEVNERKLRVEDAINAARAAVEEGVIAGGGSALVQI SQELEAFAEGFDGEAKVGVLAVARALTRPAYWIAENAGLDGSVVVAHVAEQANGEGFNAA TLEYGNLLEQGIIDPVKVTHSAVVNAASVARMVLTTEASVVEKPTEEEPAQAGHAHAH >gi|227860857|gb|ACLH01000063.1| GENE 20 19063 - 19356 562 97 aa, chain - ## HITS:1 COG:Cgl0581 KEGG:ns NR:ns ## COG: Cgl0581 COG0234 # Protein_GI_number: 19551831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Corynebacterium glutamicum # 3 97 10 104 104 138 76.0 2e-33 MANIKPLEDKVLVQIVEAETTTASGLVIPDSAKEKPQEATVVAVGPGRTNDKGEVVPVGV NEGDTVIFSKYGGTELKYDGQEYLLLSARDLLAVIEK >gi|227860857|gb|ACLH01000063.1| GENE 21 19504 - 20778 846 424 aa, chain - ## HITS:1 COG:no KEGG:cauri_0473 NR:ns ## KEGG: cauri_0473 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 16 424 1 409 409 683 99.0 0 MLVWLKDLQSNWLSWLAVALTLVVSSTSCTLALAMLVASPGAEENPAGPLGGTVLGMSLC VVVLVTLSQMRLIIAEREPVYRSWRMVGMPGWMILFFILGQVAVVSAAAGFLGVLPARPL LAPCVRALRSDGIPLPDIAITGQVVGIAVVVCMSAALVGALPPLRRVFRPHATAHPAWLM VKFLLASVAVGSTVYGCLQIDDPGNLLSAEMGLVILVALFLPWLMPGIDQWTRAVGIAGN NVRVRRSFSTPHIVPWVLVAGLIVAVGSGLRFGNDVGTGGSLSSWQVFVALLGPVFAPSI VGAVLTSLLMHGRIAADIRGLTLAGAVPSAWARVQVGEAACLTLTAAGVVWALCLATLLP LQHLLTPQASFGRTLVEELWWPSFAVIFGAMFIALGVVKLALAGFVHTRAASFAEGERVS GPQR >gi|227860857|gb|ACLH01000063.1| GENE 22 20762 - 21367 330 201 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 194 1 214 245 131 36 9e-30 MLKAENLSKRYGRRTVLNRVNVSIAPGEFVAIMGPSGSGKTTLLNLLSGLDKPTSGRVNA PGRKQRAFVFQDYNLLESLNARRNATLTARFSGRRPARGRVADVFDSLGLAGLESRLPAQ LSGGQQQRVAVARALLAQAPYIFADEPTGALDDATASTVLSHLRAVARDGASVIMVTHSH LAAEAADRVISLEEVAHAGVA >gi|227860857|gb|ACLH01000063.1| GENE 23 21480 - 22610 646 376 aa, chain + ## HITS:1 COG:VCA0683 KEGG:ns NR:ns ## COG: VCA0683 COG3851 # Protein_GI_number: 15601440 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Vibrio cholerae # 65 375 210 516 527 84 27.0 4e-16 MRTFKACAWSLLLGMLCIPTLVISVLMLPWIPLVGRAAELVGRLGAQWMGVEIPPRRADR WFDWQQFYHLVLQLLISAACFTAWTALGFTAGVLAITPFVPKAEFYVGEWSTSNRPLIFL TCWPAALLLVVLLVGLNRLLVSVSVSLTRLALSPSAEEMAASRATLIDAFSGERRRIERE LHDGPQQYLTALKLNLAAAKLQAPPQAQQALTDAEHNASLALASLRATVRGIAPQVLFDD GLIPALDELLAHSGLETTLRVEGAESSIDETTALLAYHAVAEALTNASKHGAATEAVVTV AFRDMLRLEIVDNGMGPTAKEPDGESAAVDSGTGLAGLRERAAALGGTVTFGAASTNATG KGGGQLLVKLPLKEAK >gi|227860857|gb|ACLH01000063.1| GENE 24 22607 - 23242 438 211 aa, chain + ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 1 204 2 208 219 92 33.0 7e-19 MKLLLAEDSALLRAGLEQLLGALGHSVTTVTDAEVLRAIAGQEDFDLIISDVRMPPTMTD DGLQAVHDLRAADPTQPVVVLSQYVAASYLDRLLEHGGFGYLLKERVSDVEEFVRTLDDV ARGGTVVDPEVVTALLSARHTGLARLTAREREVLGLMAQGLSNKDIEDTLVLTSGAVSKH VSNVFIKLGFRPEDSNRRVKAVLAWLRHTER >gi|227860857|gb|ACLH01000063.1| GENE 25 23277 - 23705 585 142 aa, chain - ## HITS:1 COG:no KEGG:cauri_0469 NR:ns ## KEGG: cauri_0469 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 142 1 142 142 270 100.0 1e-71 MTTGFLVNPDLSRRTIEFELEHANQFLGGTTEDRVSVAFQDDGQTYAALFNPNAKAEGAD PNPVASLARNAAATGNSAFLQDPIRSICGPVIFVAADGDDKNIDEVAEAVEHGIRAVKNY REDNPEEYQLWRAAVLNSHRQV >gi|227860857|gb|ACLH01000063.1| GENE 26 23784 - 24833 726 349 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 344 518 859 860 284 48 9e-86 MLILGIESSCDETGVGIIELSDNGHMEIRADVVASSMEQHARFGGVVPEIASRAHLEAMP QVMKAALEEAGVEKPDAVAATVGPGLAGALLVGASAAKAFASAWGVPFYGVNHLGGHVAV ANLEGEELPHSVALLVSGGHTQLLEVEAVGKPMKELGTTLDDAAGEAYDKVSRLLGLGYP GGPVIDKLAAQGKPTIDLPRGLSKAEDLRGPNRHNFSFSGLKTAVARHVEKAEREGTTVQ VEDLCASFQEAVADVLTAKAVRACQDTGAKVLLLGGGVAANSRLRALAAKRCESAGIELR VPRFKLCTDNGVMIAAVAAQLIHEGAEPSGLACGTDTQLEVEVPLVAAR >gi|227860857|gb|ACLH01000063.1| GENE 27 24827 - 25342 169 171 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 1 162 227 369 380 69 29 4e-11 MRLRPLTSADAPHCAELEKVLFPGESPWPARAFEQEIAAGHTTYWAVDMNVNRVGHNDNR VGHNDNRGEVLGYAGVGRMGPAAWPEYEIRTIGVDPAAQRRGIARLMMDAIVELADSHDA PIFLEVRVGNEPAIRLYEAYDFVINGLRRNYYQPSGADAHTMYRPRKSERC >gi|227860857|gb|ACLH01000063.1| GENE 28 25339 - 26031 426 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15827107|ref|NP_301370.1| putative acetyltransferase [Mycobacterium leprae TN] # 3 229 4 220 359 168 48 1e-67 MKVLALDTATTDLVTGIVDTDTGESIDRVISGTRAHNEQLIPTIEELLADASLTYADLSA IVVGTGPGPFTGLRVGMATASALGVALNLPVHGVCTLDAIAHGRAGEWLVAIDARRKEVY WATFADGERRSGPNVSKPETLDLSAAGLASPESTRLVFPESIALRLPESIADLPREWATP RAAGLVACADLSAEPEPLVPLYLRRPDAVEPQAKPRSAALVGGIEETPAS >gi|227860857|gb|ACLH01000063.1| GENE 29 26031 - 26600 740 189 aa, chain - ## HITS:1 COG:no KEGG:cauri_0465 NR:ns ## KEGG: cauri_0465 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 189 1 189 189 369 100.0 1e-101 MNKIGQFITTVVIGGFAVFLAALIVLPMVRTADAESKEPSTVAQSLSAYPKNLDFAVFIP QDVYGPEWSAVAAVCPGTTEDQLKKGGVETKNLNIDFADGAVPDDVNYMLLVSQTGEFKA EKLPRAKVDLCDGLLQQLKSPEAAKQDFPPLLPFQQGQPLQFMRDTQEYAEKMGKNNPDY VDTDWHLAG >gi|227860857|gb|ACLH01000063.1| GENE 30 26695 - 28287 1753 530 aa, chain - ## HITS:1 COG:Cgl0574 KEGG:ns NR:ns ## COG: Cgl0574 COG2985 # Protein_GI_number: 19551824 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 1 529 1 533 533 568 59.0 1e-161 MLAFLAEQPLLTLFLIMAVGLAVGKINVFGISLGAAAAMFVALGLSAANPDIVVPAFVYQ FGLAIFVYVIGLNFGRSFFEDFRRRGWKMSVVVIVFFFVLAGLTTLAMRLFDLDPAISVG TLAGSVSSTPGMAAVVEALGGDSTPVVGYSLAYPGCIIGTILVAAIGAKMLRVNHVEDAR AEGMIAEPLEWRAVRLTRDFDATVGELQEVTGERVIATRHVNNPHNHNLAYPELPLRAGM ELLLNGTAPALDSAISQLGEEIHLNLHEEDGLVYRRLTVSSPRVAGYQLKDLDTVKEGFL IARVRRGDSDVVPNEETVLHYSDRVRVITAPGRLDDVRRFLGDSEAKLGNVDLFPFALGL FIGLLFGAIPIPLPGGTTLSFGFGGGPIVVGLILGALGRSGPINWQLPFHAKQTISTLGL TLFLAGVGTSAGGQFRDALSDPTSLKYMGVGIVLSLVSAIGIVAVSMLVLRLKFDESMGI AAGMTTNPAIMAYLNPQTGTQLAERGYATVYPTAMIGKILMCQVLALLIV >gi|227860857|gb|ACLH01000063.1| GENE 31 28289 - 28753 447 154 aa, chain - ## HITS:1 COG:Cgl0573 KEGG:ns NR:ns ## COG: Cgl0573 COG0802 # Protein_GI_number: 19551823 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Corynebacterium glutamicum # 1 152 1 161 165 171 62.0 6e-43 MRSDFPHEGRREAATPEDAWAFGEELGAALEAGDLVILDGPLGAGKTTFTQGIARGMQVK GRVTSPTFVIAREHPSRVGGPTLVHVDAYRLLDHSEDPLGELDSLDLDTEIEDAVVVAEW GGGFMERLSDVYLAVTINRDSDDDVRVFTWKWVN >gi|227860857|gb|ACLH01000063.1| GENE 32 28743 - 29840 908 365 aa, chain - ## HITS:1 COG:Cgl0572 KEGG:ns NR:ns ## COG: Cgl0572 COG0787 # Protein_GI_number: 19551822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Corynebacterium glutamicum # 1 357 3 360 361 399 58.0 1e-111 MLKTTVDLNAIAHNVARVKEAVAPARLMCVVKADAYAHGIERCAPVMAQAGADAFGVATL AEAVALRKVIDNLPIAAWLWEPTEDLAPALAADIQIGIPSLAHAQALIAAETPTEAFVMV ETGMHRSGVDKHVWEETFRLLADAPHITVLGLMSHFACADEPEHPHNDHQESEFRQALAL AREVGLECPLNHLANSPAALTRPSARFEQVRVGLALYGLEPVAGLDHGLEPAMTWEASVV AVKPISAGESTCYGLTWTAESERELATVSVGYADGLPRAFQGALQVGIGGELYPQVGRVC MDQIVVDLGSNPHGVRAGDTAVIFGRGGMSATGLAEAAGTINYEVVCRPTGRTERTYREG ASDAQ >gi|227860857|gb|ACLH01000063.1| GENE 33 29872 - 31743 2514 623 aa, chain - ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 623 3 625 625 1039 82.0 0 MCGIVGYIGRNTDGREYFALDVVLEGLRRLEYRGYDSAGVAMYADGEIGWRKKAGKVAAL ESEIAARPLKDSVLGIGHTRWATHGGPTDLNAHPHVVDGGKLAVVHNGIIENFAELKSEL EAKGHNFVSETDTEVAATLLADVFHNEAGGDLTKAMQLTGKRLEGAFTLLAIHTEQADRI VAARRDSPLVIGLGEGENFLGSDVSGFIDYTKSAVEMDNDQVVTITADDIEITDYEGNPA QGKPFEIKWDAAAAEKGGFNSFMEKEIHDQPAAVRDTLLGRLDETGNLVLDEIRIDESVL KSIDKIIVIACGTAAYAGHVARYAIEHWCRIPCEVELAHEFRYRDPIVNEKTLVVALSQS GETMDTLMAVRHARQQGAKVIAICNTQGSSIPRESDAALYTHAGPEIAVASTKAFLAQIT ATYLLGLYLARLRGNMFSDEVNSVLEDLRDMPDKVQAIIDNEQQVYDLANAMENAKSVLF LGRHVGFPVALEGALKLKEIAYLHAEGFAAGELKHGPIALIEEGQPVFVIVPSPRGRDSL HAKVVSNIQEIRARGAITIVIAEEGDEAVEAYANHIIRIPQAPTLMQPLLATVPLQIFAC GVATAKGYDVDQPRNLAKSVTVE >gi|227860857|gb|ACLH01000063.1| GENE 34 31861 - 32682 896 273 aa, chain + ## HITS:1 COG:no KEGG:cauri_0460 NR:ns ## KEGG: cauri_0460 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 273 1 273 273 422 100.0 1e-117 MSANLKKHLGTLSKRGPHRVLVGDLSYAGLEGKVYTPVEGKGLPAVAFAHDWTKSIKDYH ATLRHLASWGIVVVAPDTETGVFAKHRNLAADLESALQIAAGVRLGAGKISVSASKLGVF GHGMGGGVATLAAVDNPKVRAVAALYPADTSPSAVQAAHAVQARGLVIGAGQDDIFRAGN PAKLANAWGGPVAYREIAKGTQSGFSEDKFFKLALGSGFFQGSAVETARGLVTGFFLSTL AGESKYDAFAAADASAKGVESFVGEDLTKRAGF >gi|227860857|gb|ACLH01000063.1| GENE 35 32756 - 32974 201 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262183856|ref|ZP_06043277.1| ## NR: gi|262183856|ref|ZP_06043277.1| hypothetical protein CaurA7_07683 [Corynebacterium aurimucosum ATCC 700975] # 1 72 1 72 72 107 100.0 4e-22 MTVPWLYDVLWGVLPLLYLLVAFVVLGIEIKYDREIAHIKLWTAAQLLLPGIALIVWLFI EVPQLKRLKQDE >gi|227860857|gb|ACLH01000063.1| GENE 36 33333 - 34967 179 544 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167042352|gb|ABZ07080.1| putative ribosomal protein L31e [uncultured marine crenarchaeote HF4000_ANIW97M7] # 432 533 128 226 236 73 36 3e-12 MVKSLLGDYSQAVSQFQAASQGGYSGPSTPIGLLGDMVGSVEGINPGDLVTNTVSAMGAR RPGRGGNGLREFLLGTVLSLAGGALMDHLRGVQDDFEKERDEADDLVESAQQCSDAIEDV VDVSDSAVAELISAVIPLINILTMLLQRHPLGKVIIPVISRIGGELIDKTNDTITQTCRD RDTAIENCYDEFERRCTEVCERELPETPPEPECGCEEKPKECPQPEPEACAPAQPSPAPA PSAPSQPTQPSQPTQPSSPAVPQQPVEPKPETPAVPPEKPEPTQPAAVSEKECPPAEGKP QPAKPTEPHSVPTEPASTPPEEQHTPCSCHTEKEAQSCGCSEHQREIGTTKPADAGAEVP AAPVEQEVIDCPEEPVRGEDCEKPEQPPVAGEGECKPEEACCGSLGLLGVGVAILGLGLL AEAAVDFVENLPEPVPDPVPEPKPEPEPQPEPEPCPPPAPEPAPDNGVAPPPPELNNVPE PEAPPEKLAHMQAAEAPAPQPTPAPAPAPESAPGPAAGAEATPEMPPQESSETSSVHARK AGQW >gi|227860857|gb|ACLH01000063.1| GENE 37 34976 - 35287 189 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227505262|ref|ZP_03935311.1| ## NR: gi|227505262|ref|ZP_03935311.1| hypothetical protein HMPREF0308_1532 [Corynebacterium striatum ATCC 6940] hypothetical protein HMPREF0308_1532 [Corynebacterium striatum ATCC 6940] # 1 95 1 95 107 93 50.0 6e-18 MPDVFFDEDEATRLLDAVVDQTRAQSDAHRGDRPNFPQSSAGRDFGGHGAQIQALLNRLH ERGAWRLENLSATADAAREQLRAFGDVDRGLAGQLGDQEAGVN >gi|227860857|gb|ACLH01000063.1| GENE 38 35201 - 35422 115 73 aa, chain + ## HITS:1 COG:no KEGG:cauri_0458 NR:ns ## KEGG: cauri_0458 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 73 32 104 104 127 100.0 1e-28 MCVTLGTGLVHDGVEKPRGFILIKKYVGHVRPPSRPQQTVIPAFIGLRNIPSGSHATPQK CETPGQKPGVVMK >gi|227860857|gb|ACLH01000063.1| GENE 39 35429 - 36772 1776 447 aa, chain - ## HITS:1 COG:Cgl0567 KEGG:ns NR:ns ## COG: Cgl0567 COG1109 # Protein_GI_number: 19551817 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 447 1 447 447 567 74.0 1e-161 MTRLFGTDGVRGLANKKLTPILALRLGQAAAEVLTSDRESYERRPLAIIGRDPRVSGEML DAAIASGLASRGVDVVRVGVLPTPAIAFLTDDFGADLGVMISASHNPMPDNGIKFFSAGG KKLPDEVEDRIQAAMDNLTEDGPTATKIGRIISEAPDGRERYLKHLAEVVTTDLSGIKVV VDTANGAASKVAPQAYEAAGAEVVAIHNKPNAFNINEDCGSTHIEKTQEAVVEHGADLGL AHDGDADRCLAVDAEGNVVDGDQIMAILAVGMKEENDLRFNTLVATVMSNLGLKLAMQEQ GIDIKETAVGDRYVLEELNRGDFSLGGEQSGHVVLPDDCTTGDGTLTGLSIMARMAKSGK SLKELASVMTVLPQVLINVPVSDKAVILNAPEVKEAIAAAEAELGETGRVLLRPSGTEEL FRVMVEAAEKEQARKVAGKLAAVVAAV >gi|227860857|gb|ACLH01000063.1| GENE 40 36945 - 37481 890 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832284|ref|YP_002833991.1| 30S ribosomal protein S9 [Corynebacterium aurimucosum ATCC 700975] # 1 178 1 178 178 347 100 1e-94 MTEQNIDNNVADAADIAAATAATEEFTNTIGDSLATDTEAEVETAAPAIHEGPIQTVGRR KRAIARVRLVAGSGNISVNGRAFDEYFPNKLHQQDILLPLTILEREGQFDIKVTVNGGGP TGQAGALRLAIARALNIYNPADRPALKKAGLLTRDARAVERKKAGLHKARRAPQYSKR >gi|227860857|gb|ACLH01000063.1| GENE 41 37481 - 37963 838 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832283|ref|YP_002833990.1| 50S ribosomal protein L13 [Corynebacterium aurimucosum ATCC 700975] # 1 160 1 160 160 327 100 1e-88 MAGSSETDFQGVILSTFHPKSGDITRKWYVIDATDVVLGKLASTVADMLRGKHKPQYAPN VDCGDHIIILNADKIHISSNKREREMRYRHSGYPGGLKSMTLGQSLDANPVRVIEEAVKG MMPHNKLSNASIKKLHVFVGEEHPYAGQKPETFEFKQVAQ >gi|227860857|gb|ACLH01000063.1| GENE 42 38360 - 38647 448 95 aa, chain - ## HITS:1 COG:Cgl0564 KEGG:ns NR:ns ## COG: Cgl0564 COG4842 # Protein_GI_number: 19551814 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 95 1 95 96 113 73.0 1e-25 MSGIKYQFGAIAGAAADINSTSGRINGLLGDLKSTLQPMVSTWEGDSAAAYNAAQAKWDK AAAELNTVLATISTTVSQGNDNMSDVNRRAAASWG >gi|227860857|gb|ACLH01000063.1| GENE 43 38718 - 39035 455 105 aa, chain - ## HITS:1 COG:Cgl0563 KEGG:ns NR:ns ## COG: Cgl0563 COG4842 # Protein_GI_number: 19551813 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 105 1 108 108 119 68.0 1e-27 MTQTFRTEADVMVATAGRVDSTNDEVQGELTRLQGVVDSVRGSWAGRAQVSFDNLMQRYN SSAQQLREALTAISENIRDNARNFDSVEADNAQSFENVGGAGLAL >gi|227860857|gb|ACLH01000063.1| GENE 44 39215 - 40345 737 376 aa, chain - ## HITS:1 COG:no KEGG:cauri_0452 NR:ns ## KEGG: cauri_0452 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 376 1 376 376 621 100.0 1e-176 MTATHALRTPTTAPETTLVITVLDAATIYEGPETIYRYDLPGTGIAEGWALEAVLDQAEK VCGAEWPDVSVDVVADPSGTDVSVEAVSILRRQLAGAGATVQEPEPSPPPVSVAASAAPS SSRLAVDVPHEDLGDEDAVTVERPRPARRGRSHRVAESRWSALLGGIDPFYIAIAVMVFV VAGVSWWAVGRKDAAVAASTPDQAAEVTSAASGTSGAAPNPGTEAQPEGSAEGAGAEESG SRQLRPGQQAIDVEGMSLVLPQGFRTSVEDGLVTAAGEDPNLRILLAADPLFNVPVDVLF TEIKAQVESDPALSEPVEESGRLTYTEEPGDGSRVVWMMWEDKGHQMSVGCHTKFEPNVV QKAACRMAAESLVKKD >gi|227860857|gb|ACLH01000063.1| GENE 45 40342 - 44070 2750 1242 aa, chain - ## HITS:1 COG:Cgl0561 KEGG:ns NR:ns ## COG: Cgl0561 COG1674 # Protein_GI_number: 19551811 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Corynebacterium glutamicum # 16 1227 21 1204 1204 1212 56.0 0 MRVPTRVVDTGVAAYREPAPPLPQGSIDAEAVPEAARAQPVPLVRLLMPLVMIAAMLGMV ALMVLGAGDARRMSPMSLMFPLMMLASMAMMFNPQGGGQDPDETRRTYLRHLKALREEAL ERGAAQRAHEEHRNPDPEQLGALIPTPRLWERAADAPDALEVRVGTGPMALCTPINVPDS GAAEDLDPVCAVSLRQTVRAVGTLADMPVVIQLQAFPVVGLAGEDAAGMARALLLHLAVL HGPETVGIEYHGPEWEWLKWLPHSRDPDQAQFRICVMTEKQGHSGGELRRDAPGDSPTTT IAVGVTPHSPLGRLAEEEGIYLRAEGTLSVVTAAGEEELGSCALVDVPTALLLARTLAPY HRPFGGDVTSTPRHGRNADLPSLLGFRDVDALQASGMWQGRSPAERLCVPIGVDESGHAL MLDLKESAQGGMGPHGLCIGATGSGKSELLRTLVVALAATHSPEELNLVLVDFKGGATFL GCEELPHTSAVITNLEEESTLVERMYDAISGEMNRRQELLRKAGNFANVGEFNASAAAVA EHGPLPALVIVVDEFSELLGQHPDFAELFVAVGRLGRSLHVHLLLASQRLEEGRLRGLDS HLSYRIGLKTFSAGESRQVLGVPDAYHLPAQPGAGYLKTDADAPTRFQASYVSGPVTRRV VHDDAAEKARNSARVELFSGHRTSEEDVDYTELVDSSSTLLDTVVAAAREEATQRGQSAR RIWLPPLPPVVELSSVAALRTDPPGAGGGLRAEVGLIDRPYHQHQDPLIVDFTTGGGHLA LCGGPQSGKSMALRSIASGMALRHSPDQVRFYVIDLGGGQLRVLDRLPHVAGVAGREEPE KVRRIVDEVAGLVRRPEARHTFLIVDGWHHIGTSGADFEDLAEPITQLVADGASARVHVL IAAARWTSLRPSIRDLIAARLELRLGEAMDSLIDRKAQQKLPAAPGRGITLAGENLLFAA TSPQDIAHICGVHAEAEPVPPLKMLPAVLTELPEPEEDSSSDGVAWGIGGPDLEVLSWDP RVQAHLVCIGSQGSGKSHFLSVILAGISQLSREKARLVVIDERRAHLGTLDEEMVAAYGA SASAATQAILDTVRTLEQRLPGPDVTPAQLAARSWWEGPDIYLVIDDLDLVSEIALAPLL ELLPHARDVGLHLVLARKAGGIGRAMFGQFLSAVRDLQPALLLLDADRDEGAIFGIKPTA LPPGRGQWGVRGISQGLAQVYVPSADSSHTSPQTANNKGENQ >gi|227860857|gb|ACLH01000063.1| GENE 46 44200 - 45531 913 443 aa, chain + ## HITS:1 COG:no KEGG:cauri_0450 NR:ns ## KEGG: cauri_0450 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 443 1 443 443 577 100.0 1e-163 MTRALAHSIHVTIRIHAGQTRKEADVSLPLSSSVGEVLGELLVLVDVPPAPILWRATTAA GKTISMTTPLDRTSLEDGSVLVLSPDAPTPAPIVRDAAEALAAEASTTQLSGLAGFCGVA GLIAVGALLAAALSPSIGCAAAALLGLVLAVWTRRGSLLATAHVAAGLAGALSTGAPVST GPFGTAIPAAPLVAAAAAVGTVAVLSHVVRIGGLRARASAATWCLLVLVGVLGPAPLLAA TVVLLAASPLLTTRLAGLRVPQLPTAGQDLSISDEDPTDNSCKARRAGQAYEGIAVGCTL AGIPSLFLVALNAHADTTVVASQALCVSIAGAVIVHAARHARPTAAWALGIYGLAAASAA VAVPLREWQLLSAPTTGTWVFSVIAGLIVVAMLSVPVWAGKLQQIEPTTIVWFERAEALA LAACLPLAAHLAGLFEFIRGLGA >gi|227860857|gb|ACLH01000063.1| GENE 47 45528 - 46703 366 391 aa, chain + ## HITS:1 COG:Cgl0559 KEGG:ns NR:ns ## COG: Cgl0559 COG1404 # Protein_GI_number: 19551809 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Corynebacterium glutamicum # 56 380 49 391 414 180 41.0 5e-45 MTDLSRIGAASAVLVAALAWSSCVWPGPVAGAREPDTACAVATRSAAGPQPSAQYSEYRA RLHSFATGAGVKVAVIDTGVAAHPQLRVSPGADFVTPEEPDPLRDCDLHGTVVAGVIAGR ELGVAPDAEIYSIRQTSSHYRAPAAENGEAERAGSGTLASLAAAIEDAVNAGARVINVSV VSCVPPDAAARVDRAGVDAALRRAEEAGAVVVAASGNATAGGCEKDDVVFPAESATVLAV GALATPHDLAEYSIAAPLSAEGSVPLALEPGGGWATGKGDSTFQGTSFAAPLVSGTLALL VQRYPGDSPAQLRQRIIDSAEPGHGVVDPLTAVTYRPASEAREDRSIVVAPAAAPKDTAW PQVRLLLGALGLFILVAVFSAQPLRPPRGLR >gi|227860857|gb|ACLH01000063.1| GENE 48 46663 - 47922 994 419 aa, chain - ## HITS:1 COG:no KEGG:cauri_0448 NR:ns ## KEGG: cauri_0448 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 419 1 419 419 763 100.0 0 MARALPTTKAQVSGHKFLLRRLEHGLVFGDIRMIHDPLKRRRRALLGGVATVAFLSLGSG LIAWMQPDPQPGDAPVVRSSEGQLLALVNGTYHPVANLASARLIANEPVEAQVAGDSFLE QMNLGTPLGIADAPNLLGAATGEEPGWSACLEESTQGENWQSSSRVGTVTVVAHHAVPTF DAEHAAVVESAGTQWLLTGQGRVVLPEATSMQGRVLRRALGMTAETAVWTMPEEMLNAFT ELEPLSFPAAPPEILDTGEQLWARTEHGVFSITPTQAEMLVGVGAQRLPAQAQEVAALGD VSPTFNLPTTRVDFLSPEQGWLCATHEQGAGTLRPVASTVDLPGDSPAHRFAGLQAGVGV DSGHGYHVVSATGRRHELAGAAELSALGVEEPEQVPWEILRLLPEGSTLSRAEALKAEH >gi|227860857|gb|ACLH01000063.1| GENE 49 47978 - 48838 691 286 aa, chain - ## HITS:1 COG:Cgl0551 KEGG:ns NR:ns ## COG: Cgl0551 COG0101 # Protein_GI_number: 19551801 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Corynebacterium glutamicum # 2 278 3 280 294 376 69.0 1e-104 MSESVRLRLDLAYDGTDFHGWARQKGGLRTVQQTVEEKLSMVLRHPVELTVAGRTDAGVH ASGQVAHFDTTRAALSQRSIDGEPHKLVRRLAKLLPVDVRVHACTEVSPDFDARFSALRR HYVYRITTHPRGALPTRARDTATWLKPVDLDLMQAAADRLVGLNDFVAFCKAKPHATTIR ELLAFEWKDVSTPAEPQLYEAHVSADAFCWSMVRCLVGCCLRVGEGSRDVEFAGQMLNET SRSSQIPLAPAAGLSLVGVDYPDADQLAARAEMTRSRRAAEGTELG >gi|227860857|gb|ACLH01000063.1| GENE 50 49075 - 49554 782 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832274|ref|YP_002833981.1| 50S ribosomal protein L17 [Corynebacterium aurimucosum ATCC 700975] # 1 159 1 159 159 305 100 3e-82 MPTPKKGPRLGGSASQQKHLLSNMAASLIEHGAIKTTDAKAKVLRPYIEKIITKAKAGTV ADRRAVLKLIPHKDVVAYLFDELAPKFENREGGYTRIIKLENRSGDNAPMSQISLVLEET VTSEANRATRAAASKQAEEAKAEEAEATEAEAEETTEEK >gi|227860857|gb|ACLH01000063.1| GENE 51 49634 - 50644 1431 336 aa, chain - ## HITS:1 COG:Cgl0549 KEGG:ns NR:ns ## COG: Cgl0549 COG0202 # Protein_GI_number: 19551799 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Corynebacterium glutamicum # 1 336 1 338 338 552 86.0 1e-157 MLISQRPQLTEEFIDSSRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKIDGVL HEFTTINGVKEDVSEIILNVKGLVLSSDSDEPVVMYLSKEGPGEVTAGDIQPPAGVEIHN SDLHIASLNESAKLEMELVVERGRGYVPAAATSGEIGRIPVDQIYSPVLKVSYKVEATRV EQRTDFDKLIIDVETKNSISARDALASAGGTLVELFGLARELNTAAEGIEIGPSPQETEY IAAYSMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKLAN LGLALKDTPEDFDPTQLEGYDAETGDFKDPASDDSE >gi|227860857|gb|ACLH01000063.1| GENE 52 50714 - 51319 1031 201 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832272|ref|YP_002833979.1| 30S ribosomal protein S4 [Corynebacterium aurimucosum ATCC 700975] # 1 201 1 201 201 401 100 1e-111 MARYTGPATRVSRRLRVDLVGGDMAFERRPYPPGQAGRNRIKESEYLLQLQEKQKAKYTY GVLERQFRRYYAEANRLPGKTGDNLVVLLESRLDNVIYRAGLANTRRQARQLVSHGHFTV NGKKINVPSFRVTQYDIIDVRERSQKMEWFEEAQDRLVDANVPAWLQVVPDTLRILVHQL PERAQIDVPLQEQLIVELYSK >gi|227860857|gb|ACLH01000063.1| GENE 53 51341 - 51745 692 134 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832271|ref|YP_002833978.1| 30S ribosomal protein S11 [Corynebacterium aurimucosum ATCC 700975] # 1 134 1 134 134 271 100 9e-72 MPPKTRSGARRGGRRVVKKNVAAGHAYIKSTFNNTIVSITDPHGAVISWASSGHVGFKGS RKSTPFAAQMAAENAARKAMDHGMKKVDVFVKGPGSGRETAIRSLQAAGLEVSSITDATP QPHNGCRPTKRRKV >gi|227860857|gb|ACLH01000063.1| GENE 54 51749 - 52117 624 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] # 1 122 1 122 122 244 100 7e-64 MARLAGVDLPRNKRMEVALTYIYGIGPARAKELLEKTGISPDLRTDNLDDDQLSALRDVI EATWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGK KK >gi|227860857|gb|ACLH01000063.1| GENE 55 52302 - 52520 269 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 108 68 1e-22 MAKEGAIEVEGRIVEPLPNAMFRVELDNGHKVLAHISGKMRQHYIRILPEDRVVVELSPY DLTRGRIVYRYK >gi|227860857|gb|ACLH01000063.1| GENE 56 52744 - 53535 1137 263 aa, chain - ## HITS:1 COG:Cgl0544 KEGG:ns NR:ns ## COG: Cgl0544 COG1376 # Protein_GI_number: 19551794 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 263 1 249 249 190 49.0 2e-48 MSKIRSLVGARSLRRATAIGLVTATLSVAPAANAQTVPSIDTLFSDVQTQLDEFAGQTRE NAWNSRNQMLETLQSVNPQAADALRPVIDGAIELIFPGLIDQKNAEIRAAREAEERAHAE QIAREKAAAEEAARKAEAERQAQRFDVGPCPADARICVDRDGRRTWLQDGNGNVTYVAQG MSTGKPGEETPAGTFYINRKIKDEISWEFGNAPMPYAMYFTNNGHAFHEGSPAYQSNGCV RLTHQDAVRYWNDVPMGSKVFIY >gi|227860857|gb|ACLH01000063.1| GENE 57 53588 - 54382 809 264 aa, chain - ## HITS:1 COG:Cgl0543 KEGG:ns NR:ns ## COG: Cgl0543 COG0024 # Protein_GI_number: 19551793 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Corynebacterium glutamicum # 1 264 1 264 264 398 78.0 1e-111 MAFRRRTKTIPARTPGELDAMQAAGEIVGRALQAVRAAAAVGVSTLELDEVAEQTIRDAG AVPTFKGYGGFPGSICASVNDVIVHGIPSKEIVLAEGDLVSIDCGATLDGWVGDSAWTFG VGKLSPEAQALSDATEWVLHEGLKAMVPGNRLTDVSAALEQATYRAEDKFGVELFIVDGY GGHGIGREMHEEPYLANEGKAGRGPIIQEGSVLAIEPMLTLGTEDNEVLEDDWTVVTLDG SLSAHWEHTVAATANGPRILTQRY >gi|227860857|gb|ACLH01000063.1| GENE 58 54398 - 54943 807 181 aa, chain - ## HITS:1 COG:Cgl0542 KEGG:ns NR:ns ## COG: Cgl0542 COG0563 # Protein_GI_number: 19551792 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Corynebacterium glutamicum # 1 181 1 181 181 277 80.0 8e-75 MRYVLLGPPGAGKGTQAALLSEKLGVPHISTGDLFRANIGEGTPLGLEAKSYIDAGKLVP TDVTARMVEDRLNQDDAKDGFLLDGFPRTVQQADILEKLLSDKDLKLDGVLNFEVSEDVV VERMLARGRADDTEETIRTRLGVYREETFPLIEHYGDAIISIKAEGTVEEINERTLQAMG K >gi|227860857|gb|ACLH01000063.1| GENE 59 54943 - 56268 1743 441 aa, chain - ## HITS:1 COG:Cgl0541 KEGG:ns NR:ns ## COG: Cgl0541 COG0201 # Protein_GI_number: 19551791 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecY # Organism: Corynebacterium glutamicum # 1 441 1 440 440 720 87.0 0 MSAILQAFKDADLRKKIIFTIVMIILYRVGAQIPSPGVDYATIAGRLRDLTEEAGNLYSV INLFSGGALLQLSIFAIGIMPYITASIIVQLLTVVIPHFEQLKKEGQSGQAKMTQYTRYL TLALALLQSSGIVALADREQLLGQGVRVLAEDRNFFTLIVLVITMTSGAILVMWMGELIT EKGIGNGMSLMIFAGIATRLPTDGVNILQNNGGLVFAMVLAGLIFLVVGITFIEQGQRRI PVQYAKRMVGRRQYGGSSTYLPLKVNQAGVIPVIFASSLIYMPVLITQIVNSGSAGVSDN WWQRNVIAHLQSPSSWQYIVLYFVLTIFFSYFYVSVQYDPAEQAENMKKYGGFIPGIRPG RPTAEYLGFVMNRLLFVGSIYLAVIAVLPNILLDLGIGSAGAAGTSAFGGTAILIMVSVA LTTVKQIESQLLQSNYEGLLK >gi|227860857|gb|ACLH01000063.1| GENE 60 56649 - 57956 1854 435 aa, chain + ## HITS:1 COG:Cgl0557 KEGG:ns NR:ns ## COG: Cgl0557 COG2230 # Protein_GI_number: 19551807 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Corynebacterium glutamicum # 8 430 10 433 435 588 65.0 1e-167 MSKRFTPMTVAEIIDTFVPSPNPFRWEAFDGSSTGPADAQFTVRINNLQGLAYIATHPGD VGFARAYVTDGITVEGEHPAHPYGIFDALHAMYDKFSRPGAKALARVARSLASLGAFQIQ PVPEVERASWLRRKLHEGLSKHSKERDADVISDHYDVGNDFYELFLGDSMTYTCAYYPSP DAMLDEAQENKYRLIFDKLRLKEGDRHLDVGCGWGGMVRYAAKRGVKSLGVTLSKEQAEW GQAKIKEEGLEDLAEIRFLDYRDVTEEGFDAISAIGLLEHIGVKNYPSFFSFLHGKLKPG GVMLNHCITYPDNHKTPKGGFIDRYIFPDGELSGSGTITKCMQDVGFEVVHTESLRFDYM RTLHDWCENLKENWEEACSLVGLPTARLWAIYMAGSEWGFEHNIINLYHFVGVKLGEAGS RAGVPERRWWEDSRF >gi|227860857|gb|ACLH01000063.1| GENE 61 57974 - 59197 1361 407 aa, chain + ## HITS:1 COG:Cgl0556 KEGG:ns NR:ns ## COG: Cgl0556 COG0277 # Protein_GI_number: 19551806 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Corynebacterium glutamicum # 10 403 26 426 515 541 66.0 1e-154 MLTDLIRNHRSVDAVEIPPVGWKAHREGVDKLLRSFHAVPKDKRVRLAKKTSNLFRGRSG EQAGLDVSGLNGVIEVDPIAQTAEVQGMCAYEDLVDATLPHGLMPFVVPQLKTITLGGAV TGMGVESTSFRDGLPHESVLEMDILTGTGDIVTCSREENVDLFRLFPNSYGSLGYAVRLK IELRAVKPYVELREVRFHDFESLAHTLDDVSRTHTYDDVEVHGLDGVVFSPEESYLVMAR FTDEEGPTSDYTRDKIFYRSLQHARGIRRDRLTVRDYIWRWDTDWFWCSRAFGAQNPRVR KVWPRQLRRSSFYWKLVRLDRKYELEYNFIKKPKGLPRAERVVQDIEVTPDNLPEFLDWF FQASDIQPVWLCPIRLREGVEDLVDAGTLAADSPAPWPLYPLRPGQT >gi|227860857|gb|ACLH01000063.1| GENE 62 59204 - 59455 263 83 aa, chain + ## HITS:1 COG:Cgl0556 KEGG:ns NR:ns ## COG: Cgl0556 COG0277 # Protein_GI_number: 19551806 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Corynebacterium glutamicum # 1 83 434 515 515 97 60.0 4e-21 MGFWSGVEGNHVDPSAPGNGAFNRVIEDKVSELGGHKSLYSEAFYSPEEFAKLYGGNLPE RIKAVTDPDGRFPGLYEKTVNEA >gi|227860857|gb|ACLH01000063.1| GENE 63 59645 - 60094 753 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832263|ref|YP_002833970.1| 50S ribosomal protein L15 [Corynebacterium aurimucosum ATCC 700975] # 1 149 1 149 149 294 100 8e-79 MADIIKLHDLRPAAGSNKPKTRVGRGEASKGKTAGRGTKGTGARKQVPAAFEGGQMPIHM RLPKLKGFKNPNHVEYQVVNVADLAEAFANGGDVTVADIVAAGLVRKNQPVKVLGNGEIN VKLNVTADKFSKSAVEKIEAAGGTATATK >gi|227860857|gb|ACLH01000063.1| GENE 64 60098 - 60283 307 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832262|ref|YP_002833969.1| 50S ribosomal protein L30 [Corynebacterium aurimucosum ATCC 700975] # 1 61 1 61 61 122 100 4e-27 MALKITQVKGLVGTKPNHRANMESLGLKRIGHSVVKQDTPIIRGMVHKVRHLVTVEEVAG E >gi|227860857|gb|ACLH01000063.1| GENE 65 60287 - 60913 1051 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832261|ref|YP_002833968.1| 30S ribosomal protein S5 [Corynebacterium aurimucosum ATCC 700975] # 1 208 1 208 208 409 100 1e-113 MSDREQRDGGRSAENNNDRKGRNNGRRNDRRNHQDNERDKYIERVVTINRVAKTVKGGRN MSFTALVVVGDGQGMVGVGYGKAKEVPAAIQKGAEEARKNFFRVPMIAGTITHPVEGRDA AGIVMMKPAAPGTGVIAGGAARPVLECAGVQDILSKSLGSDNALNVVRATVDGLKQLVRP EEVAARRGKSLEEVAPAQMLRKRAGQEA >gi|227860857|gb|ACLH01000063.1| GENE 66 60954 - 61355 662 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832260|ref|YP_002833967.1| 50S ribosomal protein L18 [Corynebacterium aurimucosum ATCC 700975] # 1 133 1 133 133 259 100 3e-68 MANTENAKRTPVGKDISSRRREARARRHFRIRKTLRGTPEAPRLVVHRSSRHMHVQVIDD LAGHTLVAASSMEADVRALEGDKKAKAAKVGQLIAERAKAAGIEQVVFDRAGYKYHGRVA ALADAAREGGLQF >gi|227860857|gb|ACLH01000063.1| GENE 67 61359 - 61895 900 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832259|ref|YP_002833966.1| 50S ribosomal protein L6 [Corynebacterium aurimucosum ATCC 700975] # 1 178 1 178 178 351 100 7e-96 MSRIGLAPIAVPKGVDITINGQVVNVKGAKGTLEVELPEPITAAVEDDEIKVSRPDDDRK NRALHGLARSLVNNAVVGVTEGYTKKMEIFGVGYRVQQKGKDLEFSLGYSHPILIEAPEG ITFAVDGATKLSVSGIDKQLVGQVAAYIRRLRKDDPYKGKGIRYDGEQVRRKVGKTGK >gi|227860857|gb|ACLH01000063.1| GENE 68 61910 - 62395 809 161 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832258|ref|YP_002833965.1| 30S ribosomal protein S8 [Corynebacterium aurimucosum ATCC 700975] # 1 161 1 161 161 316 99 3e-85 MVLTAGSVSSPKSHGKRFGELLWEPQRERLKVTHMTMTDPIADMLSRVRNASNAHHDVVS MPTSKLKANIAEILKQEGYIADYSVEGHELSLELKYNNRERSLSGLRRVSKPGLRVYAKS TELPQVLGGLGVAIISTSQGLLTDRQAQEKGVGGEVLAYVW >gi|227860857|gb|ACLH01000063.1| GENE 69 62605 - 62853 347 82 aa, chain + ## HITS:1 COG:no KEGG:cauri_0427 NR:ns ## KEGG: cauri_0427 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 82 1 82 82 125 100.0 5e-28 MSETPDPIRTAHQWLKEAAELIGASPEEATALIKELLDLTKDVAHTQSRPAAPLTAYLVG LASKNTDEARAHIATLKEALNR >gi|227860857|gb|ACLH01000063.1| GENE 70 62850 - 63701 841 283 aa, chain + ## HITS:1 COG:Cgl0514 KEGG:ns NR:ns ## COG: Cgl0514 COG1526 # Protein_GI_number: 19551764 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Corynebacterium glutamicum # 3 274 2 304 305 269 51.0 3e-72 MSGRVNATFAVTKVRLDENGHVTQVDTRGDSVAGEEPLEIRVGGQTLTTTMRTPGHDVEL AHGFLHSEGHIEKVSDVRGARYCAGASVDGRNPYNLLDVELANPHALTLADLRLTTTTSA CGVCGTSSIEALMKQSRYEIPQVPVDPGVVAKLPEALKREQKQFRKTGGIHAAGAFTLDG EPVVVREDVGRHNAADKVIGNLLMEGKLPASDLILVMSSRASFELVNKAAMAGFGMLVAV SAASSLAVTTARETGMALVGFARGDRFNLYSGQLSRDTLPGRS >gi|227860857|gb|ACLH01000063.1| GENE 71 63670 - 64455 841 261 aa, chain - ## HITS:1 COG:lin0602 KEGG:ns NR:ns ## COG: lin0602 COG2116 # Protein_GI_number: 16799677 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 10 261 15 266 266 143 38.0 4e-34 MSLNEAAAVAVKKKLTLLDESLARFAVRATLAGAYLAIGTAFAGVVGMGVEKHAAGLGSL VFAALFGLGLFAIVILGADLATSNMMYMVYGAVKKQVGWGKALWLLVVTTLFNLVGVVIF AAAMSVSAKLGNMDPGHLIATMSAGKLEKTPGGLFVEAVVANFVVNMAIIGAMSAKELVS KFFVIVPIIACFVGLSLEHVIANFCLMLLTVFCASPLPDAFSLGAVLTNWSIAWMGNLIG GGFLMGGVYAWLNSGPEAYRD >gi|227860857|gb|ACLH01000063.1| GENE 72 64588 - 65139 940 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832254|ref|YP_002833961.1| 50S ribosomal protein L5 [Corynebacterium aurimucosum ATCC 700975] # 1 183 1 183 183 366 100 1e-100 MSENYTPRLKTRYREEIKKALNEEFKYENVMQIPGVTKVVVNMGVGDAARDSKMINGALE DLTAITGQKPQVRRAKKSIANFKLREGMPIGARVTLRGDRMWEFLDRLLTIALPRIRDFR GLSDQQFDGHGNYTFGLSEQTMFYEIDIDKVDRPRGMDITVVTSATNDEEGRKLLRELGF PFK >gi|227860857|gb|ACLH01000063.1| GENE 73 65141 - 65455 528 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227505200|ref|ZP_03935249.1| 50S ribosomal protein L24 [Corynebacterium striatum ATCC 6940] # 1 104 1 104 104 207 100 1e-52 MKIHKGDMVIVISGPDKGAKGKVIEAYPKRDKVLVEGVNRVKKHVANSATERGAESGGIV TQEAPIHVSNVAIVDSEGNPTRVGYRFDENGKKVRIARSNGKDI >gi|227860857|gb|ACLH01000063.1| GENE 74 65460 - 65828 594 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832252|ref|YP_002833959.1| 50S ribosomal protein L14 [Corynebacterium aurimucosum ATCC 700975] # 1 122 1 122 122 233 99 2e-60 MIQQESRLRVADNSGARELLVIRVLGGSVRRFAGIGDIVVATVKEAIPGGNVKEGDIVKA VIVRAKKETRRPDGSYIAFDENAAVILKGDNEPRGTRIFGPVARELRDKRFMKIVSLAPE VI >gi|227860857|gb|ACLH01000063.1| GENE 75 66363 - 66674 191 103 aa, chain + ## HITS:1 COG:no KEGG:cauri_0421 NR:ns ## KEGG: cauri_0421 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 103 1 103 103 159 100.0 3e-38 MPTKFNQDAKDRVVRLAEDRILTENISMQAACKIVAPKLGVSWHTARQWTQAARREGRVV ESMPEDLAAEKRKVASRKSRAARHQRVVESRLSFFASELDLKS >gi|227860857|gb|ACLH01000063.1| GENE 76 66910 - 67605 548 231 aa, chain + ## HITS:1 COG:ECs1208 KEGG:ns NR:ns ## COG: ECs1208 COG2801 # Protein_GI_number: 15830462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 2 212 75 282 296 194 50.0 9e-50 MLQRQGVDIGREQTARLMRSAGLSGKGKGGAPITTRKPTGPDLRPDLANREFKAPGPNRL WVADITYVRTRKGFVYTAFVTDVYSRRIVGWALSDSMRTEALPLRALNQAIVCATETAGL IHHSDHGSQYVSIVYNERLAEHGITASTGTVGDSYDNALAENVNGSYKNELIHRRTWADV VDVDIATFEWVNWWNESRLHQSLGYRTPAEVEAEIWEHHPSRKIMEIKANA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:44:05 2011 Seq name: gi|227860856|gb|ACLH01000064.1| Corynebacterium aurimucosum ATCC 700975 contig00132, whole genome shotgun sequence Length of sequence - 14684 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 4, operones - 2 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 663 - 1112 610 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis + Term 1137 - 1188 4.5 - Term 1291 - 1336 15.1 2 2 Op 1 . - CDS 1352 - 1780 460 ## COG1922 Teichoic acid biosynthesis proteins 3 2 Op 2 . - CDS 1645 - 2106 86 ## cauri_0415 hypothetical protein 4 2 Op 3 . - CDS 2119 - 5700 3728 ## cauri_0414 hypothetical protein 5 2 Op 4 . - CDS 5754 - 7340 1305 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 7459 - 7518 6.8 + Prom 7316 - 7375 3.0 6 3 Tu 1 . + CDS 7459 - 8235 602 ## cauri_0412 putative secreted protein 7 4 Op 1 . - CDS 8269 - 9579 960 ## cauri_0411 hypothetical protein 8 4 Op 2 . - CDS 9576 - 10898 990 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 9 4 Op 3 . - CDS 10911 - 12056 1030 ## cauri_0409 hypothetical protein 10 4 Op 4 . - CDS 12105 - 13007 735 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 11 4 Op 5 . - CDS 12979 - 13740 579 ## cauri_0407 choline/ethanolaminephosphotransferase (EC:2.7.8.2) 12 4 Op 6 . - CDS 13747 - 14289 594 ## COG0615 Cytidylyltransferase - Prom 14459 - 14518 3.7 Predicted protein(s) >gi|227860856|gb|ACLH01000064.1| GENE 1 663 - 1112 610 149 aa, chain + ## HITS:1 COG:CAC3073 KEGG:ns NR:ns ## COG: CAC3073 COG2148 # Protein_GI_number: 15896324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 1 148 79 221 222 153 53.0 1e-37 MLKFRTMRTNAEQLVDQLLAAQASAGNAGNEVLFKLQDDPRITRVGRFLRRTSLDELPQL FNVLTGRMSLIGPRPPLPREVAKFTPRELGKFNAKPGITGLWQVMGRSTLSWEDSINLDL RYCAERSFGMDIMIFFRTFKVLATQEGAY >gi|227860856|gb|ACLH01000064.1| GENE 2 1352 - 1780 460 142 aa, chain - ## HITS:1 COG:XF2360 KEGG:ns NR:ns ## COG: XF2360 COG1922 # Protein_GI_number: 15838951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Xylella fastidiosa 9a5c # 1 117 137 254 265 57 30.0 7e-09 MATRAAERIGGHQTCAFDGYGELKELRRDPSQLRAWRPDVVVLGLGAPLQEEVAAELHVA LPEAIVCTAGGWIDQLAANEQYFPVWVHKYRLGWAWRIAHEPRRLIGRYTVDAVGFLRRL PRIVSDLRVLPHKADATGFHRG >gi|227860856|gb|ACLH01000064.1| GENE 3 1645 - 2106 86 153 aa, chain - ## HITS:1 COG:no KEGG:cauri_0415 NR:ns ## KEGG: cauri_0415 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 115 1 117 188 187 90.0 1e-46 MTYNSTTDRVPSSAGASPAPDPAVAEFARRIARPGAVVTWLNHWSVQQAQWSALETMTDI GIDGTLLQLMLARCGMDMGRTSADLVLPVLFRDVLEPDQRLRSSAPRRAWRRGRRSASAG TRPAPSTATASSRSCAAIRRSCAPGVPTSSCWA >gi|227860856|gb|ACLH01000064.1| GENE 4 2119 - 5700 3728 1193 aa, chain - ## HITS:1 COG:no KEGG:cauri_0414 NR:ns ## KEGG: cauri_0414 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 1193 20 1212 1212 2106 100.0 0 MSHSRFSLLAAAVALCAGILAPVAGAQEPAPSPAAQDTPAVVTRDGSSPDRAAASCWAIK QDNPDAKNGSYWLLTPQMEAPQEFFCDQEMDGGGWVMIGRGREGWDRYPAGQGDISALTS RDRTPADFAPAQLPTKTIDGLLSGQHINELDEGMRVVRATNNSGTRWQTADIKPQRMENW SWALSAEDPALFRFDNGPLWYRADRTDRFMGNAIGLRGIDISTTRARQYKIGFGYGPWKR VGRTGADSFIWSTNGYAALPYAELYLRPQLSNADAGFEPIPDAGLDEVTNSAVVSSFSSP TQWGVTGNLTGRSTEGNAPVQAFAQKDDTVFVGGNFTAAENHATGESLPRTAVAAFDATT GEVRRDFAVDLDGQVKALLVLPNGKLLIGGDFLRAGGEEHRGTVLVDPKTGAIDASWTLN VVSRLRDGIISVKALSLSGDHVYLGGKFTHLTSGGDNYIYARSAGRVSLDGVPDRSWNPE FNGTVVDTDVSADGGRFYAAGYFTKSVDNPVNKAAVLTTAAGAAPAVDFQFQASDTSATY QQAIEDSGELVFIGGAQHSLFGYEPQSMNRVSGSIMSSNGGDVQTIASNGEVTYASCHCN ENAYQDSYSWPTLSESRTRIDNIQWVGAWDAKTGKQLGEFSPYMLGSNNGGGWSLFIAED GALWAGGDFTGSRTNLTTAQWNGGFVRYPAQDREAPRVPDKVTFNQSTAKTVGLTWAEAS DAASYEVLRDDRVVATSISPRATVPRGGDDRYFVRAVDEAGNRSATTHVAVAPEAGSLGY DDPQLIAAGADWQYSYNQGAPDAAWNTTEGTRDGWQAGAAPLGYGGADLGTEFQTPAAAQ RPVTAWFAHLFDVADPTAFTTATLKVIADDGAVVYVNGHEVGRVRMDEGDVKDTTRANAV VSAARAAEERTTIDIPSYYLKPGENIVAVETHLNYKSSPSLTFDASLLVTDSAPATITEI PVDRSELIAAGADWRYSYAADAPAEDWATTLDVADWNEDAAPIGWGAGDVATPLTYAANT AYFVNDIELSEDDLAALREQHGDDAVVRLEVRADDAALVRLNGEEVGRVRLGEPRSEVAH TAYADSSVSASVAARDRYVVEVPLSRFHAGSNRLAVETHLNYKSAPSFVFDLSATVTEPS GDPALAALAEAAADLAEDSVAEADDDAAEAELTDDAAADDVDAAASADADAEQ >gi|227860856|gb|ACLH01000064.1| GENE 5 5754 - 7340 1305 528 aa, chain - ## HITS:1 COG:PAB0783 KEGG:ns NR:ns ## COG: PAB0783 COG2244 # Protein_GI_number: 14521379 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Pyrococcus abyssi # 36 482 12 454 511 105 22.0 3e-22 MSAPRAGAETAANDRAHDASAATAAAENSGSQQRELARGGALSFVGSATSAALGFVLTIV ISRLFGAAHAGIIFQATGAFSVVLAFAKFGLDSTSNYLLPRVKIDDARQVRPVVYGFLII AVAVSLVLVVALEIAAPLLWTDNPEVARSVRVIALFIPFGSVFLILAAILRALGSVRDYV MVANIGLPVLRPPFIAVVAVAGGAAVAASAAWALPMALMAVAAAVLVLRRLRRIEEVHGA SERALPRASQVREVFGFAVPRTLSAGLEQAIVWFDVLLAGWLLSDHAAGIYAGASRFVQA GLLVDAALRVVVSPQLSALLHRGEMSRTRELYLTATMWLVLIGTPAYVFLGFFAPIFLGL LGPEFREGGTALAVLAAGVAVTFLAGNIHSLLVMSGRSGWAAFNKLVVLAVNVGANFVLM PRYGIIGAAVAWSASMVLDALMAAVEVKVFLGIALTAREILAPVAVVLGTLGLASGVAVW LGGQSLWALLGALAVGGAAYIAVCWRWRALLRLGALGELVAAKQGKRS >gi|227860856|gb|ACLH01000064.1| GENE 6 7459 - 8235 602 258 aa, chain + ## HITS:1 COG:no KEGG:cauri_0412 NR:ns ## KEGG: cauri_0412 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 258 1 258 258 390 100.0 1e-107 MRDFKYSFHGRQGFLRKGFSTSVGIALVASLVACSKDEADENTATDAPALATESTKETRS ASASSTSQAPTSGAAETTDAAKELGSGRRGGSSDGDAKDTPRAGRAAAPHSPTATMEMPA GLDAQGVGAALAAGQEALTNPSEALPARASEALGADALEDAENQRIEYESNGWRREGTGE VVEAVALAPADEGASDGTTRVVRACVDNSGVRTFDADGTDITPNLPASERRSITLLTFER VDGQWKLMKTSFPDDPRC >gi|227860856|gb|ACLH01000064.1| GENE 7 8269 - 9579 960 436 aa, chain - ## HITS:1 COG:no KEGG:cauri_0411 NR:ns ## KEGG: cauri_0411 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 417 1 417 436 686 100.0 0 MSTGAHDAARLPAWPLLAPFAAYALWWLLGVGDFIWIVAAAVMVVTWFGRRELVAAVPII IWALFLLWVVASVPFNDTPGRIIGAVYRLLLYASAGVFAVHVYSARGSLPAHRVTRAMVW FLVGMTACGYLAMAAPELVIRTPTSYVTPGFLKHNDLIADMVIRRTSQWNPNAWVAQDVR PAAPFLYANTWGNVYSLVLPLVLLHAWFVRNSPRMWGVLAIALVSLPPALATLNRGMFIG LGVVAVWVGFQALRRGAMRAVGSAALGLVLIATAWYFSPLGASFFNRVSTTNSTDDRWAL YRTTWARTLESPLFGFGSPRPAEYPWLPSLGTQGQLWTVLFSHGIVGLVLFLLPFVLGWI ALMPCRDPAGAVLGGVLLATLVETFFYGMMTGVLVSLVVLGLGLRHRAAETQNPLHPASR RTAAASASRAASARAR >gi|227860856|gb|ACLH01000064.1| GENE 8 9576 - 10898 990 440 aa, chain - ## HITS:1 COG:VNG1067G KEGG:ns NR:ns ## COG: VNG1067G COG0463 # Protein_GI_number: 15790166 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Halobacterium sp. NRC-1 # 112 402 17 297 328 80 28.0 6e-15 MTHSTVRPGADKPGTPDPADIDVLDIAPIAIAVYDRGTDTLEILSGDENAEPSSHEARVL IREDGHTLGYREVTGSPFVPLDEQELHRLAQAEAAGLPGVQRAWTQGAGAGLSASLILCT MGRNPLLPRAVAAALAQTHNDLEVIVVDNAPATGDTRRALAGIEDPRLRIVDEPRGGLSH ARNRGVAAAQGEIIAFSDDDAQVHPEWMASILDVFAAAPAGQIGAVTGPVFPAQLRYPSQ FLFEDRGGFPKQVRPTVWASAPQPAAVRALGDPGEGGPFFPLTTARVGAGVSMAYPRAVL SEMGEFDTALGAGSLTKGGEDLDAFARVLRAGRAIITTPDAVVHHTHRENVAGLIAQSYG DGTGMAALLTKAVTHHPAAIALLARRIPRILRRIAPGSERVQGNAGSGLPMPPQLLRQEI RGFLRGPVLYAQARWATRAS >gi|227860856|gb|ACLH01000064.1| GENE 9 10911 - 12056 1030 381 aa, chain - ## HITS:1 COG:no KEGG:cauri_0409 NR:ns ## KEGG: cauri_0409 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 381 1 381 381 628 100.0 1e-178 MNDTRNAPSDAVGFDVLWAALTQRPRWIAVGIVAGLIAAAVYLVVTPCNYVASTQVNVAA VSADPLVGDKAPSTLVDFSTELQIAKSAETARAAKEKLGEDWTTEELQGVEASGDAEGTV VTLTYANPDEDRAIVGADALATAYLSQRVSLTRARVEDTKASLDEAIARSQEDFGTSTNV VQKDILSQRLATLRDRRAALSYVSFDAGSVIAAAGDNPVYRSPSPVKFLLAGALGGLVFG VVLALLAYTWMRRPRSIADLERVFHAPVFIGVGAAGDAQRWDLAAAQAAHATRGAQGVTV LRDGEDAETVAAADAVTHATGAQMLAADTHRAERLAAVQQGTDVLLVGPVRWTTTQCAEL QRDLASVGVTLRGIITTAAKH >gi|227860856|gb|ACLH01000064.1| GENE 10 12105 - 13007 735 300 aa, chain - ## HITS:1 COG:CAC2174 KEGG:ns NR:ns ## COG: CAC2174 COG0463 # Protein_GI_number: 15895443 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 9 214 5 219 336 92 27.0 1e-18 MSPLEVLMPRLSVLLPARNAQNTVGEAVSSTLRALPRDAELVVLDDGSTDATAARAADAG RGDARLRVESQPPSGGIAVALNWLLAHTDSELVGRMDADDITLPWRFRSALPALGRGADI VFNQVLYTTGARTRPAVPLGITPAAFGLHLLLTNPVSHPAMVATRAALDSVRGYRAVPAE DYDLWMRAVSAGFRLRRLGVWGLKYRVHPDQITASTTWRSASWDNADQAEAFGDLSAALV GERLTRIVTLAQHDASTRERELAHFADLIRTAGRRLGPVQHAALEHRLRSRLAWARDISA >gi|227860856|gb|ACLH01000064.1| GENE 11 12979 - 13740 579 253 aa, chain - ## HITS:1 COG:no KEGG:cauri_0407 NR:ns ## KEGG: cauri_0407 # Name: not_defined # Def: choline/ethanolaminephosphotransferase (EC:2.7.8.2) # Organism: C.aurimucosum # Pathway: not_defined # 1 253 1 253 253 414 100.0 1e-114 MATTQSRFSWAIAQLDAAQKPAQGVPAYMRWVNRRGARVIAALGYQLRWTPNQVTAISAC LSVAGMLVLIFAPFAVSTGVLAAVLLALGFLFDSADGQLARVSKLSSKSGEWVDHVVDAF RSPLVHVAVAIAVTAHEGPYSWLALVALGYSVVTSGQFLSQILAEALVRKAGAQQTRGGN LRSWILLPTDPGVLCWSFVFWGWAPAFAVVYGLLAAVAAAHSAVSLTRRFKDLSAVDRAA AELADVPSGGAHA >gi|227860856|gb|ACLH01000064.1| GENE 12 13747 - 14289 594 180 aa, chain - ## HITS:1 COG:aq_1368 KEGG:ns NR:ns ## COG: aq_1368 COG0615 # Protein_GI_number: 15606564 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Aquifex aeolicus # 34 168 12 141 168 85 36.0 4e-17 MNDHHADRTATTRTTVEELLAEPALESIVGYVPGGFDMLHIGHLNILRASRKLCTTLIAG VATDESLIRMKNRAPIVPHAERMELVRSLSFVDGVIADHDQDKRVAWEEVHFDVLFKGDD WKGTEKGARLEAELAEVGARVVYLPYTKSTSSTMLRKFLAHEIAERDVALTGAGAAREEA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:44:50 2011 Seq name: gi|227860855|gb|ACLH01000065.1| Corynebacterium aurimucosum ATCC 700975 contig00133, whole genome shotgun sequence Length of sequence - 2594 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 1642 1757 ## cauri_0405 putative ABC transport system 2 1 Op 2 . + CDS 1635 - 2592 1030 ## cauri_0404 putative ABC transport system, ATP-binding protein Predicted protein(s) >gi|227860855|gb|ACLH01000065.1| GENE 1 2 - 1642 1757 546 aa, chain + ## HITS:1 COG:no KEGG:cauri_0405 NR:ns ## KEGG: cauri_0405 # Name: not_defined # Def: putative ABC transport system # Organism: C.aurimucosum # Pathway: not_defined # 1 546 25 570 570 898 100.0 0 TGLPSLERLRAALATSPLPGAAPLLHQVDDYIAPRLANLDAPLLAVVGGSTGSGKSTLVN GVLHEEVTTSGVIRPTTRQPSLIAHPSDAEYFGAPHVLPGLAREHGEANPQATTLRIVST EAVPAGLALIDAPDFDSIDDTNRALASQLLAAADLWIFVTTPARYADNLVWQFLEDAAAR NIEVVVVLNRVDEDALATVPADLQRMLAEHNLGAEFFVVPDQGPLEGLLPAARTADLRAY LERLAADTAARHQLAARTVAGALAKVAAGTETLAAEQESRTDFAAHIDEVVAGHYADARA HVEDVTRDGNLLRTEVLARWQDFVGTSDAFRAVDRWFSATLDRIGSFFTGKPAPVREVET EIEAGLHGVIIDGAETAAARAWSYLGSSAPELRAAASPGLAHASADISERAALLVREWQA ELVSDIEENAAGKRMTARLASLGVNAVTVALMVVVFASTAGLTGGEIAIAGGSAVVGQKL LETIFGEDTVRRMAKAARERLDERVGALMDSERERYNTVTAPLTEGPSADELRAAATAAT EEVRNV >gi|227860855|gb|ACLH01000065.1| GENE 2 1635 - 2592 1030 319 aa, chain + ## HITS:1 COG:no KEGG:cauri_0404 NR:ns ## KEGG: cauri_0404 # Name: not_defined # Def: putative ABC transport system, ATP-binding protein # Organism: C.aurimucosum # Pathway: not_defined # 1 319 1 319 530 526 100.0 1e-148 MFNRSHSLSERLDALDRAAESGGEFFTPEQHAAISRVRESAAARRALSAEHTVVGFFGAT GSGKTSLFNAVVGEDLGASSPRRPTTSSPLAAVWHPEGSSELLDWLDVEDRRNRLGDFAP KAGPLILLDLPDFDSVEASNRAIATRLAGQVDVLVWVTDPEKYADNIIHDDFIRPHASHS AVTLAVLNKADKLADADVPTIADSLAELLCEDGLTKVKVVPTSAKTGLGVDDLRTAIAKV AAAHNAQTVRIEADLDTVTAAWADERAPKDVPAKAKKELDEHLATAAGAERLAAATAAAY RKRLGQTTGWLLTSWMLRL Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:45:21 2011 Seq name: gi|227860854|gb|ACLH01000066.1| Corynebacterium aurimucosum ATCC 700975 contig00134, whole genome shotgun sequence Length of sequence - 15413 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 8, operones - 4 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 523 527 ## cauri_0404 putative ABC transport system, ATP-binding protein 2 2 Tu 1 1/0.500 - CDS 462 - 2651 2311 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 2695 - 2754 3.0 3 3 Tu 1 . - CDS 2764 - 4089 963 ## COG1621 Beta-fructosidases (levanase/invertase) 4 4 Op 1 . + CDS 3577 - 4980 599 ## COG0524 Sugar kinases, ribokinase family 5 4 Op 2 . + CDS 4977 - 5369 338 ## cauri_0400 hypothetical protein 6 5 Tu 1 . - CDS 5423 - 6145 624 ## cauri_0399 putative secreted protein - Term 6263 - 6299 6.2 7 6 Op 1 50/0.000 - CDS 6324 - 6605 464 ## PROTEIN SUPPORTED gi|227832228|ref|YP_002833935.1| 30S ribosomal protein S17 8 6 Op 2 50/0.000 - CDS 6608 - 6838 380 ## PROTEIN SUPPORTED gi|227832227|ref|YP_002833934.1| 50S ribosomal protein L29 9 6 Op 3 50/0.000 - CDS 6838 - 7254 723 ## PROTEIN SUPPORTED gi|227832226|ref|YP_002833933.1| 50S ribosomal protein L16 10 6 Op 4 61/0.000 - CDS 7258 - 8004 1270 ## PROTEIN SUPPORTED gi|227832225|ref|YP_002833932.1| 30S ribosomal protein S3 11 6 Op 5 59/0.000 - CDS 8004 - 8366 585 ## PROTEIN SUPPORTED gi|227832224|ref|YP_002833931.1| 50S ribosomal protein L22 12 6 Op 6 60/0.000 - CDS 8370 - 8648 492 ## PROTEIN SUPPORTED gi|227832223|ref|YP_002833930.1| 30S ribosomal protein S19 13 6 Op 7 61/0.000 - CDS 8662 - 9498 1471 ## PROTEIN SUPPORTED gi|227832222|ref|YP_002833929.1| 50S ribosomal protein L2 14 6 Op 8 61/0.000 - CDS 9534 - 9836 498 ## PROTEIN SUPPORTED gi|227832221|ref|YP_002833928.1| 50S ribosomal protein L23 15 6 Op 9 58/0.000 - CDS 9836 - 10498 1115 ## PROTEIN SUPPORTED gi|227832220|ref|YP_002833927.1| 50S ribosomal protein L4 16 6 Op 10 40/0.000 - CDS 10495 - 11151 1121 ## PROTEIN SUPPORTED gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 17 6 Op 11 . - CDS 11187 - 11492 509 ## PROTEIN SUPPORTED gi|38233084|ref|NP_938851.1| 30S ribosomal protein S10 + Prom 11979 - 12038 3.3 18 7 Op 1 . + CDS 12141 - 12638 783 ## COG1302 Uncharacterized protein conserved in bacteria 19 7 Op 2 . + CDS 12640 - 12945 240 ## cauri_0386 hypothetical protein 20 7 Op 3 . + CDS 12978 - 13172 346 ## cauri_0385 hypothetical protein + Term 13189 - 13227 5.2 21 8 Op 1 . + CDS 13232 - 14074 455 ## cauri_0384 hypothetical protein 22 8 Op 2 . + CDS 14067 - 14645 484 ## cauri_0383 hypothetical protein 23 8 Op 3 . + CDS 14638 - 15204 573 ## cauri_0382 hypothetical protein 24 8 Op 4 . + CDS 15293 - 15413 84 ## cauri_0381 hypothetical protein Predicted protein(s) >gi|227860854|gb|ACLH01000066.1| GENE 1 2 - 523 527 173 aa, chain + ## HITS:1 COG:no KEGG:cauri_0404 NR:ns ## KEGG: cauri_0404 # Name: not_defined # Def: putative ABC transport system, ATP-binding protein # Organism: C.aurimucosum # Pathway: not_defined # 1 173 358 530 530 253 100.0 2e-66 LRSYAAAAADGLSPAWANAVADRAESITDTLPDALDRAAARTRLPAQPSKAWGILTFIQW LALLAALVGVLWYLAAAFIPGALTPLLGADLTPEIEGWPYPTLLILGGLLLGIVLGLISA AFGGAIGAGVKARTRRALRKEIAATSQELIVEPLSELRSRYGAFLDDIHAAAR >gi|227860854|gb|ACLH01000066.1| GENE 2 462 - 2651 2311 729 aa, chain - ## HITS:1 COG:Cgl2590_2 KEGG:ns NR:ns ## COG: Cgl2590_2 COG1263 # Protein_GI_number: 19553840 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 97 483 1 387 406 499 71.0 1e-141 MDHSQVAARILSAIGGEDNIVALAHCATRLRMVLKDSKKVDKAALENDPDLKGIFEAGGM FQVIVGPGDVNVVFDEINKATSKDIAVSTDNLKDIAAGSGNRFSRAVKVLADIFVPLIPI LVGGGLLMALNNVLTVNGLFGEQSVIEMFPAMADVAGLINLLASAPFAFLPVLVGFTATK RFGGNEFLGAGMAMAMVMPDLVNGYNVAATIEAGEMPYWHIFGLDVAQAGYQGSILPTLV ISWILATIEKWLHKRLKGTVDFMLTPLLTLLVTGFITFALIGPFLRTAGDWLGLGLANLA EFAGPVAGFLFGLVYSPIVITGLHQSFPPIETMLWNEGGSFVFPTASTANIAMGGAALAI YFLTKSDKMKGLAGASGISALFGITEPAIFGVNLRLRWPFYIGMGASAIASMMVALLDVK ATALGAAGFIGVVSIRPEDYGQFLLCCVLSLVVAFGATFAYGRVLISRNGTIDPDATDVP AAATDGAAPSAVADPNAFRIASPLSGTAIALSSVSDPMFAAGKLGAGAAVEPTVGTLVAP IDGTVTVTFPSGHAYAVRGKDAAGKNVDILMHIGFDTVNLKGQHFTPHVKKGDEVKVGDV LCEFDIEAIKAAGYPVTTPVVVSNSKKTGPVLPTYMAGETIDFGDPLATVAPKPEPADAP RLTPSSFLAVQHALGGVAAFRDNQGTEIRDLWALRCREILQGNRFACGGVSARRRGCRRG MRRISSAVH >gi|227860854|gb|ACLH01000066.1| GENE 3 2764 - 4089 963 441 aa, chain - ## HITS:1 COG:Cgl2591 KEGG:ns NR:ns ## COG: Cgl2591 COG1621 # Protein_GI_number: 19553841 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Corynebacterium glutamicum # 4 428 9 422 429 434 53.0 1e-121 MNYRPLFHLSPPSGRLNDPNGVFIDGNNLHVYYQHDPCFPHAAKQTGWGHAVASLGEAKP WRHYPDALYPIREHDAHGCYSGGAVVDGEDVWLFYTGNLKCDDVRIPSQNRVRAVDAGGP EGGFYEHDSANPLINGPAEGFTGHYRDPQITRDAQGWRMVLGAQAEDETGHAVLYRSTDL AQWSFEGAITFDTSSAQPGLSPDLVPGGYMWECPNLLTLRDRATGEDKDVLVICPQGLEP VLADDTTHYASSDQCGYLVGRLEGTVFHVERGFSELDYGHQFYAPQLVEKDGEAIMLGWM GLPAQDDTPTVEEGWVHTLTLPRRVWLEDGWVRQAPLWSLPAVPPEAARAGFGSVATLTA GEGTYVLVDDSGADAFRVTYGGGELRLAVGEDERIVPCPAGSVELIADGCAVEVFAGDGR IAGASVVFGASDARWKGWIAR >gi|227860854|gb|ACLH01000066.1| GENE 4 3577 - 4980 599 467 aa, chain + ## HITS:1 COG:BMEI1833 KEGG:ns NR:ns ## COG: BMEI1833 COG0524 # Protein_GI_number: 17988116 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Brucella melitensis # 181 458 2 301 308 155 37.0 1e-37 MPCFILRLGAEHHAPTLRVAGDLGIAIVPREALRGAIDERIGGIVLIEATFWTTSIDGTD AILRGYPHVIALEVSCIKQPHVLTVNHRAARVATMGVVLPDGVQRVRVVSPRLRLAQGSH GMPPARLLSRVREAGVMLIVNMQVVAVDEDSIRVIETAGGRGEVEKRTVVHALDSMDSMD IMVCGEGLVDLVPRGRGQLVDLTPALGGGPFNVAVAASRLGASVGFQSRLSRDAFGQALM ERLHKERVDTSLVQRGEEPTTLAVCNIGEDGSATYSFYTEGTADRLIEPALADVPWACFG TVSLALEPGASRYAALLKDLAAKGTKVALDPNIRPFFATPEHREFLLSLLPHVTLLKLSE EEVEFLGEDALAQVPVVVTTRGAEGLSVRTDSVSLQVPPVKVEVADTIGAGDTVMAALLS QLLTRDISALSAEEWQEILHFAATAAAITVSRTGAQPPTFSDVEERL >gi|227860854|gb|ACLH01000066.1| GENE 5 4977 - 5369 338 130 aa, chain + ## HITS:1 COG:no KEGG:cauri_0400 NR:ns ## KEGG: cauri_0400 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 130 1 130 130 192 100.0 5e-48 MKYPLRAGVVHGLLFVLVAVAFILPVLFGAAALLPVPLAAWASVVLAALALVDASYHAFS PSQRPTRGLRALSAVGGVALIAGWLMWLRIYNTIDLVSAMPYRIGTFLLAVGAVLSAFCF AIALTHRGTR >gi|227860854|gb|ACLH01000066.1| GENE 6 5423 - 6145 624 240 aa, chain - ## HITS:1 COG:no KEGG:cauri_0399 NR:ns ## KEGG: cauri_0399 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 240 1 240 240 395 100.0 1e-109 MSALSRSLLTLVCASSVATLVGCAAEEPATVAADAPAVGSAEDVPTAQPDPESEAQPQPS IEAAGPKPTLPAGYSPGAGNSGTVEDTKTSASTDGNNAEADTSVASGIEKCEYRKDRVAS EGNPADAPTTVSGTVHKVKAGDLDGGVPGIVVSDYASAEVWFLALDAPTTLSGYKSGSPS RKTLTFSGKNCIGLVEKRAWAGYEGKHVTLPFEPDRGWWQSDASVPMGALYVDYTPDEVL >gi|227860854|gb|ACLH01000066.1| GENE 7 6324 - 6605 464 93 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832228|ref|YP_002833935.1| 30S ribosomal protein S17 [Corynebacterium aurimucosum ATCC 700975] # 1 93 1 93 93 183 100 7e-46 MSEANVNTKKEKGARKTRTGIVVSDKMNKTIVVELEDRKQHALYGKIMRTNKKVKAHDEN ETAGIGDRVLIAETRPLSKDKHFRLVEIVEKAK >gi|227860854|gb|ACLH01000066.1| GENE 8 6608 - 6838 380 76 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832227|ref|YP_002833934.1| 50S ribosomal protein L29 [Corynebacterium aurimucosum ATCC 700975] # 1 76 1 76 76 150 100 4e-36 MATGTPAHEFRELDNAELENRLKDAKEELFNLRFQKATGQLTNNRRIGTVKRDIARIYTV LRERELGLSVAPGAEA >gi|227860854|gb|ACLH01000066.1| GENE 9 6838 - 7254 723 138 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832226|ref|YP_002833933.1| 50S ribosomal protein L16 [Corynebacterium aurimucosum ATCC 700975] # 1 138 1 138 138 283 100 7e-76 MLIPKRVKYRRQHRPTRSGVSKGGNRINFGDYAIQALEPAYITNRQIEAARIAINRHVKR GGKVWINIFPDRPLTQKPLGVRMGSGKGPVEKWVANVKPGRILFEMTYPNEATAIEALRR AGQKLPCKVRIIKKEDQF >gi|227860854|gb|ACLH01000066.1| GENE 10 7258 - 8004 1270 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832225|ref|YP_002833932.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975] # 1 248 1 248 248 493 100 1e-139 MGQKIHPHGLRLGITSDWKTHWYADKDYANYVAEDIKIREYLEKGLDRAGIADVVIERTR DRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSVA EQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRTERYHEGRVPLHTLRA EIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRESELNAPAQGRGRGDRNGRPRRGGQRRQ RAQQKQEG >gi|227860854|gb|ACLH01000066.1| GENE 11 8004 - 8366 585 120 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832224|ref|YP_002833931.1| 50S ribosomal protein L22 [Corynebacterium aurimucosum ATCC 700975] # 1 120 1 120 120 229 100 7e-60 MSDTITSASATARYVRVTPMKARRVIDLVRGKSVAEALAILKYAPQGAAEPVAKVVASAA ANAENNFGLDPRTLVISEAYANEGPTMRRFQPRAQGRAFMIRKRTSHITVVVESQKEGAK >gi|227860854|gb|ACLH01000066.1| GENE 12 8370 - 8648 492 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832223|ref|YP_002833930.1| 30S ribosomal protein S19 [Corynebacterium aurimucosum ATCC 700975] # 1 92 1 92 92 194 100 4e-49 MPRSLKKGPFVDEHLLNKVDAQNEAGTKQVIKTWSRRSTILPDFIGHTFAVHDGRKHVPV FVEDSMVGHKLGEFAPTKTFKGHVKDDKKGRR >gi|227860854|gb|ACLH01000066.1| GENE 13 8662 - 9498 1471 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832222|ref|YP_002833929.1| 50S ribosomal protein L2 [Corynebacterium aurimucosum ATCC 700975] # 1 278 1 278 278 571 100 1e-162 MAIRKYKPTTPGRRASSVSEFEEITRSTPEKSLLRPLSKTGGRNNYGRITTRHIGGGHKR RYRLIDFRRTDKDGIPAKVAHIEYDPNRTANIALLHYADGEKRYIIAPKGLKQGTIVEAG PNADIKVGNNLPLRNIPTGTTIHAVELKPGAGAKLARSAGASIQLLGKEGKYAILRMPSS EIRRVDIRCRATVGEVGNADQMNIRWGKAGRMRWKGVRPTVRGVVMNPVDHPHGGGEGKT SGGRHPVSPWGHKEGRTRNPNRYSNNMIVRRRRPNKKR >gi|227860854|gb|ACLH01000066.1| GENE 14 9534 - 9836 498 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832221|ref|YP_002833928.1| 50S ribosomal protein L23 [Corynebacterium aurimucosum ATCC 700975] # 1 100 1 100 100 196 100 8e-50 MAKLANPRDVIIAPVVSEKSYGLMEQNVYTFYVSTDSNKTQIKDAVEQIFGVKVASVNTV NRAGKRKRTRTGYGQRKSTKRAYVTLREGSDSIDVFGAGA >gi|227860854|gb|ACLH01000066.1| GENE 15 9836 - 10498 1115 220 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832220|ref|YP_002833927.1| 50S ribosomal protein L4 [Corynebacterium aurimucosum ATCC 700975] # 1 220 1 220 220 434 100 1e-121 MSNLKLDVQTADGKTNGTVELPAELFDTEASIALMHQVVNAQLAAARQGTHKTKTRGEVR GGGRKPFRQKGTGRARQGSIRAPHYTGGGTVHGPVPRDYSQRTPKRMIKAALYGALSDRA RNERIHVIEELVPGQTPSTKQAKAFIERLTDRKNVLLVIGREDINARRSANNLPNVQILD AGQLNTYDVLYSDDVVFSVEALHTFVERATGAAEEAKEEK >gi|227860854|gb|ACLH01000066.1| GENE 16 10495 - 11151 1121 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] # 1 218 1 218 218 436 100 1e-122 MSENEIKGILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEK DPRKVNKPATGHFKKAGVTPRRYVAEIRMDDTSAYEVGQEVKVDIFEGVSFVDVTGTTKG HGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNL KIQKIDAESNLLLIKGAIPGARGGLVTVKTAVKGGAHA >gi|227860854|gb|ACLH01000066.1| GENE 17 11187 - 11492 509 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|38233084|ref|NP_938851.1| 30S ribosomal protein S10 [Corynebacterium diphtheriae NCTC 13129] # 1 101 1 101 101 200 99 4e-51 MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTEKNVYAVIRSPHKYKD SREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ >gi|227860854|gb|ACLH01000066.1| GENE 18 12141 - 12638 783 165 aa, chain + ## HITS:1 COG:CAC2085 KEGG:ns NR:ns ## COG: CAC2085 COG1302 # Protein_GI_number: 15895355 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 35 155 9 126 131 71 35.0 5e-13 MAENTTPKDVAEQTAPANDTTPAPAPERNKNLETDFGTTRIDDVVVSKIAGIAAREVSGV AALGGGGARMMGSIRESFGASEDVRQGVSVEVNNGTASIDIAIIAEYGVAIHELAEAIRR NIMNAVERMTGLSVDRVDVVVHDVKLPREEDESTEATPAVTQGQA >gi|227860854|gb|ACLH01000066.1| GENE 19 12640 - 12945 240 101 aa, chain + ## HITS:1 COG:no KEGG:cauri_0386 NR:ns ## KEGG: cauri_0386 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 101 1 101 101 173 100.0 2e-42 MTSAELTLPLATSIAAAVTDLRGVAKLSPGRFGEVALLFPGERVHGIRRPSPQDDTHLEL HIVVDVSAGVPLAELGDVTRTTVRATWPAVRRVDVVFDDAV >gi|227860854|gb|ACLH01000066.1| GENE 20 12978 - 13172 346 64 aa, chain + ## HITS:1 COG:no KEGG:cauri_0385 NR:ns ## KEGG: cauri_0385 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 64 1 64 64 82 100.0 6e-15 MKNYTSLGVIAGLVLAFFIYLGVWYVALAVLLAAVGGVIGAHFDGRIDLTAVWKGVVGQD RGRG >gi|227860854|gb|ACLH01000066.1| GENE 21 13232 - 14074 455 280 aa, chain + ## HITS:1 COG:no KEGG:cauri_0384 NR:ns ## KEGG: cauri_0384 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 280 21 300 300 407 100.0 1e-112 MEKVINAAIASVSGTAAVDAKLAGLAGRAFPRVMAQMDPDTQMVAVDVDIAVYWPSPVTE VAKAVRTAIREAVRDFTGFRTTRVNVTVGGAVPGERTTAPAVETRAPLSAQIPAIVPERA VKPVDVSQRAAVRQVSTPAPVPVRTVRVPEAVRVRGVGKPADVKVRTEGFGPGENRYDKL RPIHTPEPQPLRAVTDPAPVQVRSVPAPREFALRHVEVPRPVEPRGVDLPHTSPLRVPHA KPLQLRPIAIRPSAEFTRRVDVPRPVPLRAITIREGGHHE >gi|227860854|gb|ACLH01000066.1| GENE 22 14067 - 14645 484 192 aa, chain + ## HITS:1 COG:no KEGG:cauri_0383 NR:ns ## KEGG: cauri_0383 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 6 192 1 187 187 303 99.0 3e-81 MSENSLPAGFGQRPKASPPARGWTIIVGILPLAAAVVVGREAWVAGANEGATSWLQPFID VMSSPEIHTWMLVAGGVAIFVGLILLWAACAPRKTTHVRIGSEDASMWLRAVDIARVASA TARRVPGTTAARSRAKITKERSRITVTATGDADDAQLKERVTEAVTAALAAITPAPEVTV VIENEQEDIANV >gi|227860854|gb|ACLH01000066.1| GENE 23 14638 - 15204 573 188 aa, chain + ## HITS:1 COG:no KEGG:cauri_0382 NR:ns ## KEGG: cauri_0382 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 25 188 18 181 181 330 100.0 2e-89 MSKKLAGVDRALLAILGILLIALGVWPILIHFDVSFATYLASWVDHDTWAGLPGQSWWPF ALGLATIICALTGLWLVISNLRHHRFNSMPSEESNEEGAIKTEMPAIAGAVADTLADIEG VEKVSRLVAYDRSRPTLQYEVLADPDTPLLRIKDAIEVNDRDFRAAFPDVDVDTRYKVHF TKVRNAVT >gi|227860854|gb|ACLH01000066.1| GENE 24 15293 - 15413 84 40 aa, chain + ## HITS:1 COG:no KEGG:cauri_0381 NR:ns ## KEGG: cauri_0381 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 40 1 40 378 82 100.0 5e-15 MGDIETYIHLRNSGIALVEHIPGTPDELRTLGADASDAAE Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:45:53 2011 Seq name: gi|227860853|gb|ACLH01000067.1| Corynebacterium aurimucosum ATCC 700975 contig00135, whole genome shotgun sequence Length of sequence - 1283 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 41 - 196 69 ## - Term 298 - 332 2.5 2 2 Tu 1 . - CDS 483 - 1283 548 ## cauri_0380 hypothetical protein Predicted protein(s) >gi|227860853|gb|ACLH01000067.1| GENE 1 41 - 196 69 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPRTLLWLAGASIGVVLVQVVSLSFLPFRSAVSAGVSCCRVVGLVAALVV >gi|227860853|gb|ACLH01000067.1| GENE 2 483 - 1283 548 266 aa, chain - ## HITS:1 COG:no KEGG:cauri_0380 NR:ns ## KEGG: cauri_0380 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 2 253 13 264 277 487 100.0 1e-136 VDPTRIDRTLAALRAAWEGQPDLPLGTLFGMLAAEGYGWGVPDDELTARLESMAAVHPPL VPLDAHLITEGLWLVVTPSHRVTLTPNALSKASAVPVAKALTEPSEAQISRPGCMAVVRS VSKEGQRGQPVAWQVSALPPVGPGRPLVLADTEGFEHRFGVIESVTRLCEDNRSLTGLKR RSVGDRVWFIRTDMETILLDHGLHIVERKNRELIRTDFSWHRIEEGEIGKPLRIHLSRGT LHSFGVIKELILAESEPWSPPSSPPH Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:46:06 2011 Seq name: gi|227860852|gb|ACLH01000068.1| Corynebacterium aurimucosum ATCC 700975 contig00136, whole genome shotgun sequence Length of sequence - 6135 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 140 82 ## cauri_0380 hypothetical protein 2 1 Op 2 30/0.000 - CDS 219 - 1409 1339 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 1526 - 1585 3.4 - Term 1563 - 1609 1.4 3 1 Op 3 . - CDS 1779 - 3905 3441 ## COG0480 Translation elongation factors (GTPases) - Prom 4046 - 4105 4.9 - Term 4046 - 4079 -1.0 4 2 Op 1 56/0.000 - CDS 4208 - 4675 791 ## PROTEIN SUPPORTED gi|227832207|ref|YP_002833914.1| 30S ribosomal protein S7 5 2 Op 2 . - CDS 4682 - 5053 626 ## PROTEIN SUPPORTED gi|227832206|ref|YP_002833913.1| 30S ribosomal protein S12 - Prom 5222 - 5281 2.2 - Term 5210 - 5258 -0.5 6 3 Tu 1 . - CDS 5305 - 5907 574 ## COG0563 Adenylate kinase and related kinases Predicted protein(s) >gi|227860852|gb|ACLH01000068.1| GENE 1 2 - 140 82 46 aa, chain - ## HITS:1 COG:no KEGG:cauri_0380 NR:ns ## KEGG: cauri_0380 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 46 1 46 277 91 100.0 1e-17 MIAGLLGLGVMFDPTRIDRTLAALRAAWEGQPDLPLGTLFGMLAAE >gi|227860852|gb|ACLH01000068.1| GENE 2 219 - 1409 1339 396 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 396 1 407 407 520 64 1e-147 MAKEKFERTKPHVNIGTIGHVDHGKTTTTAAITKVLADAYPEENTAFAFDMIDKAPEEKE RGITINISHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTRE HVLLARQVGVPYILVALNKCDMVDDEEIIELVEMEIRELLAEQDYDEEAPIVHISALKAL EGDEKWVQSVIDLMQACDDSIPDPERELDKPFLMPIEDIFTITGRGTVVTGRVERGSLNV NEDIEIIGIKDKSMSTTVTGIEMFRKMMDYTEAGDNCGLLLRGTKREEVERGQVCIKPGA YTPHTKFEGSVYVLKKEEGGRHTPFMDNYRPQFYFRTTDVTGVIKLPEGTEMVMPGDNVE MSVELIQPVAMDEGLRFAIREGSRTVGAGRVTKILD >gi|227860852|gb|ACLH01000068.1| GENE 3 1779 - 3905 3441 708 aa, chain - ## HITS:1 COG:Cgl0488 KEGG:ns NR:ns ## COG: Cgl0488 COG0480 # Protein_GI_number: 19551738 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Corynebacterium glutamicum # 1 708 1 709 709 1202 84.0 0 MAQEVLKDLHKVRNIGIMAHIDAGKTTTTERILYYTGINRKVGETHDGGATTDWMEQEKE RGITITSAAVTCFWNNNQINIIDTPGHVDFTVEVERSLRVLDGAVAVFDGKEGVEPQSEQ VWRQAAKYDVPRVCFVNKMDKLGADFYFTVQTIIDRLGAKPLVMQLPIGAEDDFDGVVDL INMQAITWRGKTEIGTDGTIEEIPADLQEKAEEYREKLLETVAESDEELMEKYFGGEELT IEEIKGAIRKLTVNSEIYPVFCGTAYRNKGVQPLLDAIVDYLPNPLDIGEVNGTSLDGEE TLTRKPSVQEPFSALAFKIAVHPFFGKLTYVRVYSGQAIPGENMLNSTKNKKERVGKLFQ MHANKENPVEHADAGNIYAFIGLKETTTGDTLCNPDNPIILESMDFPDPVIQVAIEPKTK ADQEKLGTAIQKLAEEDPTFTVQLDEESGQTVIGGMGELHLDVLVDRMKREFKVEANIGN PQVAYRETIRKKVESLDYTHKKQTGGSGQFAKVIVTIEPYNPDPEELEEGESATYKFENA VTGGRVPKEYIPSVDAGIQDAMQYGFVAGFPLVNIKATLEDGAYHDVDSSEMAFKLAGSQ VLKEAVAKAKPVLLEPIMAVEVVTPEEYMGTVNGDISSRRGQVFAMEDRSGAKVVKAKVP LSEMFGYIGDLRSSTAGRANFTMVFDSYAEVPSSVAQEIIEERTGSKA >gi|227860852|gb|ACLH01000068.1| GENE 4 4208 - 4675 791 155 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832207|ref|YP_002833914.1| 30S ribosomal protein S7 [Corynebacterium aurimucosum ATCC 700975] # 1 155 1 155 155 309 100 4e-84 MRKNAAPKRPVVKDPVYNSEQVTMLVNKILRDGKKSTAERIVYGALEVCREKTGTDPVGT LEKALGNIRPDLEVRSRRVGGATYQVPVEVKPARSNTLALRWLVTFTRQRRENSMIERLA NEILDASNGLGASVKRREDTHKMAEANRAFAHYRW >gi|227860852|gb|ACLH01000068.1| GENE 5 4682 - 5053 626 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832206|ref|YP_002833913.1| 30S ribosomal protein S12 [Corynebacterium aurimucosum ATCC 700975] # 1 123 1 123 123 245 100 5e-65 MPTIQQLVRKGRHSKKAKVATAGLKGSPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG IEVSAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGALDTQGVKDRKQARSRYGAK KGQ >gi|227860852|gb|ACLH01000068.1| GENE 6 5305 - 5907 574 200 aa, chain - ## HITS:1 COG:Cgl1057 KEGG:ns NR:ns ## COG: Cgl1057 COG0563 # Protein_GI_number: 19552307 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Corynebacterium glutamicum # 45 187 2 144 177 148 52.0 7e-36 MQDTDRTDHREGGKGTADTNAAEMDRLLNDVMSLAAARKRPMRPITVLIDGPSGAGKTWT SVALAERTGWRVVHLDEFYPGWHGLQEGSKMVSEQVLRENNPGYWRWDWEANAPKDWASL DERDDLIVEGVGSVTEATVAAANERGSVVTVRIDGPREKRRERALERDPGYEEWFETWEK QEQQHFAERAVEADLTWEWR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:46:48 2011 Seq name: gi|227860851|gb|ACLH01000069.1| Corynebacterium aurimucosum ATCC 700975 contig00137, whole genome shotgun sequence Length of sequence - 117241 bp Number of predicted genes - 110, with homology - 107 Number of transcription units - 55, operones - 25 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 34/0.000 - CDS 1 - 526 459 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 2 1 Op 2 4/0.053 - CDS 615 - 2051 200 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 2 Tu 1 . - CDS 2167 - 2811 679 ## COG4721 Predicted membrane protein - Prom 2902 - 2961 2.5 - Term 3274 - 3317 1.2 4 3 Op 1 . - CDS 3431 - 3574 145 ## cauri_0371 hypothetical protein 5 3 Op 2 . - CDS 3645 - 4268 408 ## cauri_0370 hypothetical protein - Prom 4343 - 4402 3.9 6 4 Op 1 58/0.000 - CDS 4475 - 8488 6028 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 7 4 Op 2 . - CDS 8572 - 12051 858 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 12253 - 12312 2.1 - Term 12206 - 12245 3.2 8 5 Tu 1 . - CDS 12346 - 13302 1146 ## cauri_0367 hypothetical protein 9 6 Op 1 6/0.000 - CDS 13420 - 13764 204 ## COG3093 Plasmid maintenance system antidote protein 10 6 Op 2 . - CDS 13742 - 13918 72 ## COG3549 Plasmid maintenance system killer protein - Prom 14020 - 14079 1.7 - Term 14098 - 14136 2.7 11 7 Op 1 47/0.000 - CDS 14190 - 14576 607 ## PROTEIN SUPPORTED gi|227832195|ref|YP_002833902.1| 50S ribosomal protein L7/L12 12 7 Op 2 . - CDS 14663 - 15184 845 ## PROTEIN SUPPORTED gi|227832194|ref|YP_002833901.1| 50S ribosomal protein L10 - Term 15467 - 15493 -1.0 13 8 Op 1 7/0.000 - CDS 15523 - 16317 599 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 14 8 Op 2 8/0.000 - CDS 16324 - 17376 538 ## COG4779 ABC-type enterobactin transport system, permease component 15 8 Op 3 33/0.000 - CDS 17373 - 18203 424 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 16 8 Op 4 . - CDS 18441 - 19385 1154 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 19445 - 19504 3.0 + Prom 19421 - 19480 2.8 17 9 Tu 1 . + CDS 19510 - 20304 377 ## COG2375 Siderophore-interacting protein + Term 20446 - 20481 -1.0 18 10 Op 1 . + CDS 20958 - 21974 317 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 19 10 Op 2 . + CDS 21971 - 23272 878 ## COG4529 Uncharacterized protein conserved in bacteria 20 10 Op 3 . + CDS 23269 - 24657 1256 ## COG0019 Diaminopimelate decarboxylase + Term 24737 - 24769 2.4 - Term 24691 - 24729 8.3 21 11 Op 1 55/0.000 - CDS 24761 - 25465 1160 ## PROTEIN SUPPORTED gi|227832185|ref|YP_002833892.1| 50S ribosomal protein L1 22 11 Op 2 45/0.000 - CDS 25562 - 26005 755 ## PROTEIN SUPPORTED gi|227832184|ref|YP_002833891.1| 50S ribosomal protein L11 - Term 26107 - 26153 12.2 23 12 Op 1 46/0.000 - CDS 26171 - 27079 1582 ## COG0250 Transcription antiterminator 24 12 Op 2 . - CDS 27219 - 27545 445 ## COG0690 Preprotein translocase subunit SecE - TRNA 27571 - 27646 90.2 # Trp CCA 0 0 - TRNA 27771 - 27845 77.3 # Met CAT 0 0 - TRNA 27880 - 27955 84.2 # Thr GGT 0 0 + Prom 28111 - 28170 1.8 25 13 Tu 1 . + CDS 28202 - 29323 1084 ## COG0435 Predicted glutathione S-transferase + Term 29376 - 29420 9.2 - TRNA 29413 - 29497 58.0 # Tyr GTA 0 0 - Term 29523 - 29567 6.2 26 14 Tu 1 . - CDS 29574 - 30578 1156 ## COG0142 Geranylgeranyl pyrophosphate synthase - Prom 30665 - 30724 1.9 27 15 Tu 1 . + CDS 30684 - 31910 1474 ## COG0644 Dehydrogenases (flavoproteins) 28 16 Op 1 . - CDS 31933 - 32622 354 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 29 16 Op 2 . - CDS 32634 - 33833 1439 ## COG0438 Glycosyltransferase 30 16 Op 3 . - CDS 33842 - 34285 346 ## cauri_0346 putative secreted protein 31 16 Op 4 . - CDS 34286 - 35986 1661 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 32 16 Op 5 . - CDS 35970 - 36572 814 ## cauri_0344 hypothetical protein 33 16 Op 6 . - CDS 36583 - 38934 2185 ## COG0178 Excinuclease ATPase subunit 34 16 Op 7 . - CDS 38983 - 40038 1199 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 40061 - 40120 1.8 + Prom 40001 - 40060 2.9 35 17 Op 1 . + CDS 40093 - 41502 2012 ## COG3069 C4-dicarboxylate transporter 36 17 Op 2 . + CDS 41566 - 42168 549 ## cauri_0340 putative secreted protein + Term 42207 - 42245 1.5 + Prom 42237 - 42296 3.2 37 18 Tu 1 . + CDS 42330 - 42791 688 ## cauri_0339 hypothetical protein + Term 43009 - 43042 -1.0 + Prom 42990 - 43049 2.8 38 19 Op 1 . + CDS 43136 - 44116 1275 ## COG0447 Dihydroxynaphthoic acid synthase 39 19 Op 2 . + CDS 44143 - 44304 194 ## cauri_0337 hypothetical protein 40 19 Op 3 . + CDS 44316 - 45464 1202 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 41 20 Tu 1 . - CDS 45461 - 46150 579 ## COG1321 Mn-dependent transcriptional regulator + Prom 46149 - 46208 2.7 42 21 Op 1 25/0.000 + CDS 46258 - 47184 1071 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 43 21 Op 2 42/0.000 + CDS 47184 - 47894 204 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 44 21 Op 3 10/0.000 + CDS 47891 - 48745 537 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 45 21 Op 4 . + CDS 48742 - 49596 755 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 46 21 Op 5 . + CDS 49602 - 50486 981 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 47 22 Tu 1 . - CDS 50495 - 50836 498 ## cauri_0329 hypothetical protein 48 23 Tu 1 . + CDS 50880 - 51203 363 ## cauri_0328 hypothetical protein - Term 51090 - 51118 3.0 49 24 Op 1 . - CDS 51200 - 51457 347 ## cauri_0327 hypothetical protein 50 24 Op 2 8/0.000 - CDS 51458 - 52498 1403 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component - Prom 52578 - 52637 2.7 51 24 Op 3 4/0.053 - CDS 52640 - 54271 2252 ## COG1333 ResB protein required for cytochrome c biosynthesis 52 24 Op 4 13/0.000 - CDS 54284 - 55090 872 ## COG0785 Cytochrome c biogenesis protein 53 24 Op 5 4/0.053 - CDS 55087 - 55692 669 ## COG0526 Thiol-disulfide isomerase and thioredoxins 54 24 Op 6 4/0.053 - CDS 55692 - 56300 720 ## COG0406 Fructose-2,6-bisphosphatase 55 24 Op 7 . - CDS 56332 - 57666 1654 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 57811 - 57870 1.6 56 25 Tu 1 . + CDS 57870 - 58343 254 ## cauri_0320 putative secreted protein + Prom 58470 - 58529 2.4 57 26 Op 1 24/0.000 + CDS 58567 - 60177 1915 ## COG0845 Membrane-fusion protein 58 26 Op 2 36/0.000 + CDS 60174 - 60848 271 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 59 26 Op 3 . + CDS 60845 - 62140 371 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 - Term 62447 - 62475 -1.0 60 27 Tu 1 . - CDS 62528 - 63472 -117 ## COG1233 Phytoene dehydrogenase and related proteins 61 28 Tu 1 . + CDS 63539 - 63655 104 ## 62 29 Tu 1 . + CDS 64341 - 64715 226 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 63 30 Op 1 . - CDS 64759 - 65064 155 ## gi|262184004|ref|ZP_06043425.1| hypothetical protein CaurA7_08433 64 30 Op 2 . - CDS 65146 - 66747 90 ## COG5479 Uncharacterized protein potentially involved in peptidoglycan biosynthesis - Prom 66782 - 66841 4.1 - Term 67011 - 67045 8.3 65 31 Tu 1 . - CDS 67152 - 67466 431 ## COG2076 Membrane transporters of cations and cationic drugs 66 32 Tu 1 . + CDS 67540 - 68379 1113 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 67 33 Op 1 . - CDS 68420 - 68608 194 ## cauri_0312 hypothetical protein 68 33 Op 2 . - CDS 68668 - 68805 102 ## - Prom 68878 - 68937 4.4 + Prom 68931 - 68990 2.5 69 34 Op 1 . + CDS 69024 - 69602 434 ## COG1131 ABC-type multidrug transport system, ATPase component 70 34 Op 2 . + CDS 69602 - 70618 791 ## cauri_0309 hypothetical protein 71 34 Op 3 . + CDS 70703 - 72214 1546 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 72 34 Op 4 6/0.000 + CDS 72282 - 72539 358 ## COG2161 Antitoxin of toxin-antitoxin stability system 73 34 Op 5 . + CDS 72545 - 72799 187 ## COG4115 Uncharacterized protein conserved in bacteria + Term 72863 - 72897 2.1 - Term 72851 - 72885 2.1 74 35 Op 1 3/0.053 - CDS 72994 - 74376 1940 ## COG1232 Protoporphyrinogen oxidase 75 35 Op 2 . - CDS 74377 - 75426 1297 ## COG0407 Uroporphyrinogen-III decarboxylase 76 35 Op 3 . - CDS 75456 - 75953 547 ## cauri_0303 hypothetical protein 77 35 Op 4 . - CDS 75950 - 76663 851 ## cauri_0302 hypothetical protein 78 35 Op 5 6/0.000 - CDS 76674 - 77651 1300 ## COG0113 Delta-aminolevulinic acid dehydratase 79 35 Op 6 23/0.000 - CDS 77737 - 79419 1846 ## COG1587 Uroporphyrinogen-III synthase - Term 79485 - 79519 5.2 80 35 Op 7 4/0.053 - CDS 79598 - 80488 1173 ## COG0181 Porphobilinogen deaminase 81 35 Op 8 1/0.263 - CDS 80489 - 81865 1421 ## COG0373 Glutamyl-tRNA reductase 82 36 Tu 1 . - CDS 81971 - 82210 304 ## COG0526 Thiol-disulfide isomerase and thioredoxins 83 37 Tu 1 . + CDS 82278 - 83333 1299 ## COG0560 Phosphoserine phosphatase 84 38 Tu 1 . - CDS 83330 - 83908 561 ## COG4894 Uncharacterized conserved protein - Prom 83977 - 84036 1.7 + Prom 84009 - 84068 4.9 85 39 Tu 1 . + CDS 84141 - 85325 1013 ## cauri_0294 hypothetical protein - Term 85379 - 85429 12.2 86 40 Tu 1 . - CDS 85444 - 85545 216 ## - Prom 85680 - 85739 2.3 - Term 85710 - 85773 22.0 87 41 Op 1 . - CDS 85790 - 85978 237 ## cauri_0292 hypothetical protein 88 41 Op 2 . - CDS 86179 - 86970 791 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 87079 - 87138 1.9 - Term 87069 - 87104 2.7 89 42 Op 1 . - CDS 87190 - 88029 1121 ## cauri_0290 hypothetical protein 90 42 Op 2 . - CDS 88039 - 88968 812 ## COG0248 Exopolyphosphatase - Prom 89018 - 89077 1.7 91 43 Tu 1 . + CDS 89002 - 89883 706 ## cauri_0288 putative secreted protein + Term 89965 - 89997 1.2 - Term 89796 - 89832 -0.7 92 44 Op 1 40/0.000 - CDS 89880 - 90578 1043 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 93 44 Op 2 3/0.053 - CDS 90575 - 91840 964 ## COG0642 Signal transduction histidine kinase - Term 91847 - 91886 7.4 94 45 Op 1 1/0.263 - CDS 91916 - 92677 1051 ## COG0588 Phosphoglycerate mutase 1 95 45 Op 2 . - CDS 92755 - 94020 1239 ## COG0438 Glycosyltransferase + Prom 94006 - 94065 5.4 96 46 Tu 1 3/0.053 + CDS 94097 - 95809 2375 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 95832 - 95872 2.2 + Prom 95892 - 95951 3.6 97 47 Tu 1 . + CDS 95988 - 97727 2028 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 98 48 Tu 1 . - CDS 97724 - 98650 579 ## cauri_0281 hypothetical protein 99 49 Tu 1 . + CDS 99035 - 107953 11526 ## COG4982 3-oxoacyl-[acyl-carrier protein] reductase + Term 107988 - 108037 11.1 - Term 107974 - 108023 11.1 100 50 Tu 1 . - CDS 108120 - 109316 939 ## COG1295 Predicted membrane protein - Prom 109521 - 109580 1.9 101 51 Tu 1 . + CDS 109401 - 109877 668 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Term 109623 - 109655 -0.1 102 52 Tu 1 . - CDS 109893 - 111011 1356 ## COG0812 UDP-N-acetylmuramate dehydrogenase 103 53 Op 1 . + CDS 111036 - 111527 779 ## cauri_0273 hypothetical protein 104 53 Op 2 . + CDS 111555 - 112364 658 ## cauri_0272 hypothetical protein 105 53 Op 3 . + CDS 112388 - 113185 900 ## cauri_0271 putative secreted protein + Term 113240 - 113280 9.6 - Term 113036 - 113074 -0.1 106 54 Op 1 . - CDS 113208 - 113657 316 ## COG0274 Deoxyribose-phosphate aldolase 107 54 Op 2 . - CDS 113657 - 113947 489 ## cauri_0269 hypothetical protein 108 54 Op 3 . - CDS 113961 - 114422 707 ## cauri_0268 hypothetical protein 109 54 Op 4 . - CDS 114438 - 115772 1604 ## COG2733 Predicted membrane protein 110 55 Tu 1 . + CDS 115945 - 117241 1459 ## COG1002 Type II restriction enzyme, methylase subunits Predicted protein(s) >gi|227860851|gb|ACLH01000069.1| GENE 1 1 - 526 459 175 aa, chain - ## HITS:1 COG:Cgl1056 KEGG:ns NR:ns ## COG: Cgl1056 COG0619 # Protein_GI_number: 19552306 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 1 175 16 190 251 197 61.0 1e-50 MFVWVTPLLLSVDWVSAVVSLVMTLLFAPLCGVSWPRLVKAGWFLFLIAPLSGISMLLYG APGGREYFSWWLITVSDNSLELAIAITVRVLAVALPMVVLARDIDPTELGDALSQILKLP SRFVIGAVAGVRMMTLFKSDWQYLAMARRARGLTDEGRIKHLITMSFGLLVLALR >gi|227860851|gb|ACLH01000069.1| GENE 2 615 - 2051 200 478 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 289 478 26 215 245 81 30 2e-14 MADVGSAGATKLVARGYGWTHAGRRAPALADIDLVVSPGEKVLLCGDSGSGKSTLLAAIA GVLGGDDEGTRVGEILLEDASGHVEPPGRTIPVGLVLQDPDSQVIAARVGDDVAFGCENL AYPRSEIWQRVSAALSMVGPSVDLSFPTEQLSGGQKQRLALAGVIAMGAGMVLLDEPTAN LDPEGAREVIEAVTTMVERTGATLIVVEHQHAAWKGVLDRAIELKDGRIVADGPLDTVVA SRSISGLPRAREIGGTSPSNTGAVPETAALWSTDLVTRFGPPRSYALPRGMSTVITGPNG AGKTTWLMTVAGLLPAVSGEIGVAEYVRRGLKGSPLTWKSRELADRIGFVFQNPEHQFVA RTVAEELRVAPRVMHREVPEARIAELVESLRLGHLLNANPFTLSGGEKRRLSVATALVTA PEVLLLDEPTFGQDPHTFTELVWLLRRMADEGTTIASVTHDPLFISALGDHRVEVSRG >gi|227860851|gb|ACLH01000069.1| GENE 3 2167 - 2811 679 214 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 25 210 15 200 201 197 67.0 9e-51 MNSVSHGGFVNSGETANGVASRSLNWRVVDIVVASVLGVACGIVFLAWNTVGYAWFQAMD ALTPGLGGIATGIWLLGGVVGGLIIRKPGAALYVELLAAIVSAVLGSQWGISTLYSGIAQ GIGVEIVLAIFLYRRFGLGIAMLGGMAAGWGAFVLELFTSGNLGKTLQFNIIYLVTLSIS GAVLAGAVGYFVVKALAKTGALDRFAVGREQHSA >gi|227860851|gb|ACLH01000069.1| GENE 4 3431 - 3574 145 47 aa, chain - ## HITS:1 COG:no KEGG:cauri_0371 NR:ns ## KEGG: cauri_0371 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 47 24 70 70 63 100.0 3e-09 MADSDADLERFGGDHQQAAGSVALIDAGALAMGLSVDACALGAGVSK >gi|227860851|gb|ACLH01000069.1| GENE 5 3645 - 4268 408 207 aa, chain - ## HITS:1 COG:no KEGG:cauri_0370 NR:ns ## KEGG: cauri_0370 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 207 1 207 207 326 100.0 3e-88 MTQSNKKVHDSTSSSRATAESSKAWTGVDALVVMGFSLMGALLLWGKAAIFQRVAEGEDM PLSWENLMVLLSALWVLQFMGALCAALTTRKPGAAFVGYVMTVILCRALVGSFDQLGWST IIATGLAMEAAFFAFKYTRFTILSGALAGAAAVLVTGIATFVTRDLAPGDAAIQFRAEVI QFLVTVVTVAPVSYLLAMTVRSAFYKL >gi|227860851|gb|ACLH01000069.1| GENE 6 4475 - 8488 6028 1337 aa, chain - ## HITS:1 COG:Cgl0482 KEGG:ns NR:ns ## COG: Cgl0482 COG0086 # Protein_GI_number: 19551732 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Corynebacterium glutamicum # 7 1335 1 1333 1333 2288 85.0 0 MKGRHYVFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGP TRDWECACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRL GYLLDLAPKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVEAEIAERA AKLEQDLAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQM IIDETIYEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELKEIINNGKGQKKMRALK RLKVVAAFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRL KRMIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFR QNLLGKRVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKR MVERQRPEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNA DFDGDQMAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGE DEIGGEGRYQPATEDRPEQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPSDIEAEQ FPDGWQKGQAWLAETTLGRIMFNDLLPWNYPYLEGVMVRKGGAGNKMLLGDVINDLAAKY PMITVAQVLDKMKDAGFYWATRSGVTITMHDVLVLPNKTEVLESYEKEAERIERKYWEQG ALTERERYDRLVELWKDATDTVGNAVEEMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGM VVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQD VIVREEDCGTRQGVRVPLGIEVAPGSYDLHELWETSASGRVVANDVKDENGEVIAEAGTD LTEELSRTIVNAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSI GEPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWT LTITPDDGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVSTGDRLMRGAPD PHDVLEVLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLP GNLIDLSEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAA INKRSDQLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDG FGEFTGASVPLEEDYTF >gi|227860851|gb|ACLH01000069.1| GENE 7 8572 - 12051 858 1159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 665 1120 900 1387 1392 335 43 8e-91 MAVSRQTKSVANIPGAPKRYSFAKISEPIAVPGLLDLQLDSYAWLIGTPEWREREQAERG EDARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEPVKNTVDECKEKDINYSAPLYVTA EFINNDTQEIKSQTVFIGDFPMMTEKGTFIVNGTERVIVSQLVRSPGVYFDQTIDKSTER PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTEEQIKERFGFSEL MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQALLDNSFFRAKRYDLAKVGRYKVN RKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHAGEREMKAPNGEMISIHTDDIDHFGNRRL RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG SLASYARVNAFGFIETPYRKVVDGKVTDQVEYLTADEEDRFAIAQAEVEKDADGTLTGDR IEVRLKDGDIGVTDASGVDYVDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL VRSEAPYVGTGMEQRAAYDAGDLIITPKAGVVENVTADLITIMDDEGQRDTYMLRKFERT NQNTNYNQTPLVSLGERVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN QRIVEEDILTSIHIEEHEIDARDTKLGPEEITREIPNVSDDVLRDLDERGIVRIGADVRA GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVSRFSREDD DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMEDGTPVDIILN THGVPRRMNIGQVLEVHLGWLAHAGWKIDTEDPANAELLKTLPEELYDVPPESLTATPVF DGATNEEISRLLASSKPNRDGDVMVDEHGKARLFDGRSGEPYMYPVSVGYMYMLKLHHLV DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV GRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSTDGTPMELSGSDDDDMDG APSLGINLSRDERSDADIA >gi|227860851|gb|ACLH01000069.1| GENE 8 12346 - 13302 1146 318 aa, chain - ## HITS:1 COG:no KEGG:cauri_0367 NR:ns ## KEGG: cauri_0367 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 318 1 318 318 565 100.0 1e-160 MLPKSRIFSVLLLGLGVALIAAGLTASSFLSFSPRLPLDIENTTWTMQDENATAQALSAE GVTQYEGPMTYQLNMDIQDPADKDTATLRVGESAIRGGTGNVEDLSFARVWNYPVDRLSG EATGPAALSHTMGSPTAEVPVEGYWLKLPADAEQTTYPVFDPVLRKAADAVFEESLDIDG RTVYRYHQEIEPTNVATLYAGSTTTTLSNEDGSTEQGYLFHAATRDLFVDQATGLVVGMD IDVRDYWADREGNEREVQFAFQGATDEESRAELLQQAERFPRSAVGQWVRWGGVGIGALL VLLGALGAFRRPASRHAR >gi|227860851|gb|ACLH01000069.1| GENE 9 13420 - 13764 204 114 aa, chain - ## HITS:1 COG:CC2867 KEGG:ns NR:ns ## COG: CC2867 COG3093 # Protein_GI_number: 16127099 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Caulobacter vibrioides # 15 104 12 102 104 82 45.0 2e-16 MTLSTTTDAHTHVDVVPVPHPGEVLLLEFLKPCGITQYRLANDIGTTRSQVSKITRGALG ISADMALRLSAYFGNSAEFWLGLQEEYDLWKARQTTDVSAIVPWNHKEEADSHS >gi|227860851|gb|ACLH01000069.1| GENE 10 13742 - 13918 72 58 aa, chain - ## HITS:1 COG:SMc02476 KEGG:ns NR:ns ## COG: SMc02476 COG3549 # Protein_GI_number: 15966812 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Sinorhizobium meliloti # 1 58 35 92 92 70 53.0 7e-13 MIGRSVNVTDLRIPPANRLERLKGDLEGYYSIRVNSQWRIIFKWTPEGAVDVDFIDYH >gi|227860851|gb|ACLH01000069.1| GENE 11 14190 - 14576 607 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832195|ref|YP_002833902.1| 50S ribosomal protein L7/L12 [Corynebacterium aurimucosum ATCC 700975] # 1 128 1 128 128 238 100 1e-61 MAKLTKDELIEAFKEMTLIELSEFVKEFEEVFDVEAAAPVAAVAAGAPAAGGAAEEEKTE FDVVLTDAGAKKIGVIKAVREIVSGLGLKEAKELVEGAPKAILEGASKDDAEAAKAKLEE AGASVELK >gi|227860851|gb|ACLH01000069.1| GENE 12 14663 - 15184 845 173 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832194|ref|YP_002833901.1| 50S ribosomal protein L10 [Corynebacterium aurimucosum ATCC 700975] # 1 173 1 173 173 330 100 3e-89 MANPKNTADLAALKEKLEGANSIVLTEYRGLTVGQLQELRNNLGFDVEYSVAKNTLFKIA ANEAGIEGLDEHLTGPTAIAFIKGEAVDAAKVITKFADDNKALVIKGGYMDGNALSADQV EAIAKLDNRETTLAKLAGAMKGSMAKAAAVFNAPATKMVRTAAALQDKKAAEA >gi|227860851|gb|ACLH01000069.1| GENE 13 15523 - 16317 599 264 aa, chain - ## HITS:1 COG:BS_fhuC KEGG:ns NR:ns ## COG: BS_fhuC COG1120 # Protein_GI_number: 16080383 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Bacillus subtilis # 14 255 12 253 269 226 49.0 5e-59 MKDREITATGIHAGYKDGEDILSGVDLVARPGEITTLIGPNGCGKSTLLKTLSKILRPRQ GSVHIGELDVHAMSPKEAAAHVALLPQQPTAPDGLRVGELVARGRYPHLGRGRGLSAKDR DIIAQACVETGITDFIDCDIAALSGGQRQRVWLALALAQDTPVLLLDEPTTFLDPAHAIS VLQLVRKQADAGKTVVVVLHDLMLAGQYSDTMVVMNGGEVIAQGTPRQALRKDVLAAAYG IDAEIWDDPRSDAPVIVPRGVLSD >gi|227860851|gb|ACLH01000069.1| GENE 14 16324 - 17376 538 350 aa, chain - ## HITS:1 COG:Cgl0492 KEGG:ns NR:ns ## COG: Cgl0492 COG4779 # Protein_GI_number: 19551742 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Corynebacterium glutamicum # 30 349 65 381 388 136 32.0 5e-32 MSGRVKGDVVKQLRSQERQRRAWIWAATCFFVLVAASSYVLLLGQGPVDLSPGRVLEILN GGGSRSEIRVVWDLRMPVAIATLVVGAALGLAGSWTQSMSRNPLASPDILGVTGGASVMV VLGTVFSRPLLADGLSMFWWRAGLALLGAVLAAILLVALGGIGTSNRIVIVGIALSLLFQ ALVAYLLRAAELLRAAQSQLWLAGTTGFVRMEVIVPLLVGLTPFVVLGLWCARELPLLAH DDLSALSLGVNITRTRALLLVAATGICAVTVSVAGPIGFIALLAPHVGRIVARTPTPVPL VSCAAGAALLSACAVIAGALPMDAPVGAVSSIIGGCALVILVWNAARRRG >gi|227860851|gb|ACLH01000069.1| GENE 15 17373 - 18203 424 276 aa, chain - ## HITS:1 COG:Cgl0493 KEGG:ns NR:ns ## COG: Cgl0493 COG0609 # Protein_GI_number: 19551743 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 1 271 69 342 348 144 39.0 2e-34 MWDLRIPRTFVAYFAGAAIAVSGVIAQSWTRNPLADPGFIGITAGASFLVALGTALGVAT STGMRTALALIGAGMATALVLGVSRRFQDPLTLVLVGAGVAAALSSGAMLIGLYSTDVLD SMRRWTIGSTFGRGPEDVAIAGAGLLVGFIIAARVARPLDLLAMGEESSVALGGSPTLAR RGAALSIVVLAGCATAATGPIAFVGFAIPHLLRRFTGPEVTAMIVPAALLGGCSVLAADI LGRLIAGPSELEMSIVLAFVGAPFLIWAVHRGEHKL >gi|227860851|gb|ACLH01000069.1| GENE 16 18441 - 19385 1154 314 aa, chain - ## HITS:1 COG:Cgl0627 KEGG:ns NR:ns ## COG: Cgl0627 COG0614 # Protein_GI_number: 19551877 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 43 314 63 327 332 131 31.0 2e-30 MFAIHRRVKAVVAIVSAAAIALTGCSRGSGEDNAGAGSAEEVRVASLGLGDADTVLALGI TPVAVAPWGSQGDGDGSGVGPWAKELLGDAKPEVIYNTASGFTAEVLEQVTASDPTQIIA VNQAVDQEAKKSLEDIAPLTVKPESFEDWQIPWEEQVKTIAAAVDKEEEGEKLIDQSEEA FEQFRDSHPELQGKRAAIVMPYDGKLGLYTADDGRGQFIENLGFEIPQELQGDGSSFFVD YAPENYSQLNDVDYLFVLDYNGAADELKKDSTFQGLDVVKDGRVRYLDTDTGNAMSMPNP LTIPWAVDKFEEKL >gi|227860851|gb|ACLH01000069.1| GENE 17 19510 - 20304 377 264 aa, chain + ## HITS:1 COG:PA2033 KEGG:ns NR:ns ## COG: PA2033 COG2375 # Protein_GI_number: 15597229 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Pseudomonas aeruginosa # 4 261 6 299 302 67 25.0 2e-11 MTHHRLLPVTLTGNTRLKPRLHRLTFHSPAFGSYPLAGPDEYFGLLMPQDGQEFSPFPVE DANVRAAVTGVPDDIRPALRWYTIRRLNHKTCTIDVDVVTHGDNGPGSRWILKAQPGDTA GIYTGQARWQAPKKSQLLLADASALPALWHILEHYEAFSPETLSGVDVVAMIADDAEIED GFEKKWRSKVHSLTMVTAPHEEHSARAVQLLGSRFSADTAPDSVWVSGEGDLAKAVRSIA VHDWCVPREDVIWSVYWMKGKPRP >gi|227860851|gb|ACLH01000069.1| GENE 18 20958 - 21974 317 338 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 9 311 3 301 308 126 30 4e-28 MGLMISPRIHSQAQPPIGHTPLMRVEAICPRPDVHLYLKLEQFNVGGSAKERTARALIQA ALDAGDIGPGCTLVESSSGNLGMALARQTSLAGMKFHCVVDPRVNSSTVATMRAYGARVE LLDHPDPETGDWLTARRTRVAELLEEIPDSFNLNQYSNEAAFYAHAEGTMTEIMDQLGQA PTHLLVAMSTTGTLGGCVRKLTELGADTETIGVDAEGSVLFGGQRGTRILPGYGAGIVTD LSTKFSPSSVERVPDLDAIVAARRLAQAEGLLPGASGGAVIAAFQRLAPTLPAGAEVVAV LHDGGQPYLDTIYNDSWVCEHFDISPAELAARVEGDSE >gi|227860851|gb|ACLH01000069.1| GENE 19 21971 - 23272 878 433 aa, chain + ## HITS:1 COG:Cgl2084_1 KEGG:ns NR:ns ## COG: Cgl2084_1 COG4529 # Protein_GI_number: 19553334 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 9 430 3 429 456 167 30.0 3e-41 MSPQEPSRRIAIIGGGPRGLWAVEELIERARVPVDITVFDPYPAGAGAVYRPQQPPQWRL NVNCAIVTTAHDSFNAWCTRRGESTTDAFPPRAQVGQFLADTWAAALYRAPQHVRIRHLP QRVRSVSAADGGFIVDGSPFDELLVCTGHDHLHPGALVHEPSRVPVTGLYFGADLPSGPR RIGVRGAALSFIDVCLLYGDTAEVIFPVNRSGRFMEVKPAPSAPQPEIPNDVRRACADVI DADELRDVLLAAAGSLGEFSTGDLAAVLDGHDFSGDAVAELDASLRAAEGTGPLTPAAAV GTAFRGLFQECVDWHKAHGPMPGFRELSRTLERVAFGPPPVTARRLLELIHTGVVDTRYL AAPDQIDHWREQGGIDLLIDATVAPQATPSPFHDVPGVVEIGRMNELELPGHDSLNRSVH DDIPRWAEKVGNP >gi|227860851|gb|ACLH01000069.1| GENE 20 23269 - 24657 1256 462 aa, chain + ## HITS:1 COG:Cgl2084_2 KEGG:ns NR:ns ## COG: Cgl2084_2 COG0019 # Protein_GI_number: 19553334 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Corynebacterium glutamicum # 27 462 1 421 422 479 58.0 1e-135 MTNHTTPLPVHGTVALRARWEEWMSELVADPQQVSRLTSEYGSPVNVLHPAPLGRNAQEL LDAGASHGVDTQVFFARKANKALCFVDAAREAGLGVDVASENELRQVLNRGVAPERIILS AAIKTDALLRLAIDRGVTISCDSRAEAERIAALAKALNHTAHVAPRLAPNPDNLPPTRFG ELLHAWQSHAWPETIHADGVHVHLHGYSESDRRTALAEAIALIEHLRLVGQPASFIDIGG GVPMSYLESREQWEYFQERIAAQRAGTGEPFTWKSDPLSNTYPFWQTPTRGEWLNHLLSG EVAGFGPAGRALSERNISLHLEPGRSLLDGCGIILAEVSFLKERSDGLPLIGAAMNRTQC RTAADDILLDPLLVPTAGERGAVDREPRTGFVVGAYCIEDEVILRRELDFPEGIAVGDTL AIPNTAGYFMHILESASHQIPLARNVYLDADGRDWVPDDIDA >gi|227860851|gb|ACLH01000069.1| GENE 21 24761 - 25465 1160 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832185|ref|YP_002833892.1| 50S ribosomal protein L1 [Corynebacterium aurimucosum ATCC 700975] # 1 234 1 234 234 451 100 1e-126 MSTKSKAYKAAAELVDRSRLYRPIEAAKLAKETSSKNFDATVDVVFRLGVDPRKADQLVR GTVSLPHGTGKDVRVAVFAEGDNAEAAKAAGADIVGTEELIAAINEGNIDFDVAIATPDQ MAKVGRVARVLGPRGLMPNPKTGTVTADVTKAVADVKGGKISFRVDKASNLHAIIGKASF DAEKLAENYGALYDEIIRLKPSSAKGIYAKKITISTTSGPGIPVDASVEKNYTD >gi|227860851|gb|ACLH01000069.1| GENE 22 25562 - 26005 755 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227832184|ref|YP_002833891.1| 50S ribosomal protein L11 [Corynebacterium aurimucosum ATCC 700975] # 1 147 1 147 147 295 100 7e-79 MAPKKKVTGLIKLQIEAGAANPAPPVGPALGAHGVNIMEFCKAYNAATESQRGNVVPVEI TVYEDRSFDFKLKTPPAAKLLLKAAGIKKGSGVPHTDKVGSVTWDQCKEIAQTKFEDLNA RDIENGARIIAGTARSMGITVDGVPAK >gi|227860851|gb|ACLH01000069.1| GENE 23 26171 - 27079 1582 302 aa, chain - ## HITS:1 COG:Cgl0468 KEGG:ns NR:ns ## COG: Cgl0468 COG0250 # Protein_GI_number: 19551718 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Corynebacterium glutamicum # 87 302 102 318 318 277 75.0 2e-74 MSEENTGTSLEQAMIDNVQEQAAEAVEATEENQQPQEELSAEEKEAAEKEAATKAAEAAL GGVSDEAEGEGTGEASASAEADAAAAADAEYKSRLRAFTKELKKQPGQWYIIQCYSGYEN KVKTNLDMRAQTLEVEDSIFEVVVPVEQAIEKKDGKKKVVKRKLLPGYVLVRMELNDAAW SVVRDTPGVTSFVGNEGNATPVKIRDVAKFLMPNDPTVSPEASAADSEGEQVVAMPEKEA AKAYAHDFEVGEAVTILSGPLASVSATISEIDPETGKMQGLVSIFGRETPVELSPTEIER IS >gi|227860851|gb|ACLH01000069.1| GENE 24 27219 - 27545 445 108 aa, chain - ## HITS:1 COG:Cgl0467 KEGG:ns NR:ns ## COG: Cgl0467 COG0690 # Protein_GI_number: 19551717 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Corynebacterium glutamicum # 1 108 1 111 111 90 55.0 6e-19 MSDEKQPSTGAPRPTGKRQLSGAATTSTDSYTDKRVVRVEDKKEDSFGGSVGSFPGEVVS EMKKVVWPTGKEMLQYVLVTFAFLVVLTALVWGVDTLTGLGVEAILAP >gi|227860851|gb|ACLH01000069.1| GENE 25 28202 - 29323 1084 373 aa, chain + ## HITS:1 COG:Cgl1235 KEGG:ns NR:ns ## COG: Cgl1235 COG0435 # Protein_GI_number: 19552485 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Corynebacterium glutamicum # 10 367 5 359 359 498 68.0 1e-141 MTTGIQKEPSKDWAGDAQNASTEGEFKRDTNYIRDRILAFITSEEPEPANDERGEALHWP VQPHRYRLIAARACPWAHRAVIVRRLLGLEDVISLGLAGPTHDKRSWTFDLDPDGLDPVL RIPRLQDAYFARFPEYPRGITVPAIVEESTGKVVTNDFNSMVRDFQTEWTEFQREGAPNL LPPPEQQEEMEEINDFIFRKLNNGVYRAGFSASQEAYEEAYADVFEVLDWLEERLAHRRF IMGEHITETDIRAYTTLIRFDAVYHGHFKTNRNKISEIPNVYGYLRELFQLPGFGDTTDF TEIKQHYYIVHREINPTQVVPAGPDLHGLAQPHGRDHLPGASFAEGTTLPGPLSEGERLK NPTDFQRELFSLD >gi|227860851|gb|ACLH01000069.1| GENE 26 29574 - 30578 1156 334 aa, chain - ## HITS:1 COG:Cgl0466 KEGG:ns NR:ns ## COG: Cgl0466 COG0142 # Protein_GI_number: 19551716 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 6 334 22 350 350 418 68.0 1e-117 MSHGQTHAKHVDLGDAQLTERINAGMAAVEDLLNTELDRGQDFIKDKVRHLSLAGGKRFR PMMALLASEFGERSQSPEVVKAATVVEMVHVATLYHDDVMDEAERRRGVDSANFRWTNSV AILAGDALLAHASRLMSQLDTHTVEHFAETFEELVTGQMRETIGAGEANAVEHYTAVIRE KTAVLIASAGYLGAYHAGAGPEQCEALRQIGAAVGMIFQIVDDVIDIFSDSEESGKTPGT DLREGVFTLPVLYALEEEGEVGDELRALLTGPLEDDASVQCAIELLWQSGGRDKALADVN AYLRVVEDQLSLLPECTASEALRQLADYTVQRVG >gi|227860851|gb|ACLH01000069.1| GENE 27 30684 - 31910 1474 408 aa, chain + ## HITS:1 COG:Cgl0465 KEGG:ns NR:ns ## COG: Cgl0465 COG0644 # Protein_GI_number: 19551715 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Corynebacterium glutamicum # 7 407 5 417 424 516 65.0 1e-146 MSEQIDSTLVDVAIVGAGPAGAAAAIHAARAGHETLLVDASPFPRDKTCGDGLTPRAMHQ LELLGIEVNASYRNRGLKLHGFGGTVTAPWPSTYPSQVGTALPRYEFDALLVEAAQTAGA QLLTGTATAPQLDGNRLVEFSVGKRRVRARWVIVADGVRSTFGKQLGRTWHREEVYGIAA RAYADSPQDGEEWMHSHVELKDPEGVVQPGYGWIFPLGQGVNIGLGALSTAARPARLNTK KALDFYAEQQRSEWDLGELRNVTSAMLPMGGAVSGVAGANWMLIGDAAACVNPLNGEGID YGLETAALAVEMLGTKDLTLAWPDRLRAEYGEAFLLARTAARLLTYPQFLPLAGPVAMRG PVGRMLMPAAARLMGNLITDEDKDLLARAWRLAGGAVSALRRDTPLWA >gi|227860851|gb|ACLH01000069.1| GENE 28 31933 - 32622 354 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 16 227 1 221 221 140 36 2e-32 MSKADLEKKPFDVARMFDAVGKKYDITNTVLSFGQDARWRRLTRERLNPQPGEKVLDLAA GTAVSTEELSKSGAWCVACDFSLGMLAAGAERDVPKVAGDGMRLPFADNTFDAVTISYGL RNIHDFELGLREMARVTKPGGRLAVAEFSKPVIPVFGTVYKEYLTRLLPPIAKVVSSNPE AYIYLAESIRAWPEQHELAAAINRNGWEQAGWRNLTFGIVALHSAVKPA >gi|227860851|gb|ACLH01000069.1| GENE 29 32634 - 33833 1439 399 aa, chain - ## HITS:1 COG:Cgl0462 KEGG:ns NR:ns ## COG: Cgl0462 COG0438 # Protein_GI_number: 19551712 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 397 1 400 407 552 68.0 1e-157 MRVAIVAESFLPNVNGVTNSVLRVLEHLHEHGHEAIVIAPGARDGQEEIPDYLGFTIVRV PTVRVPLVDSLPVGVPTSAVDEALREFKPDIIHLASPFVLGAAGAFSARQLRIPAVALYQ TDVAGFATKYHASALAYGVWEWLRTIHNACQMTLAPSSLTITDLEKHHIKNVRHWGRGVD SERFHPSKRSAALRREWDPTGSKKIVGFVGRLAAEKGVHRLSALNGREDIQLVIVGDGPE RPLLEAQLPDAVFTGALGGEELAAAYASLDIFVHAGEFETFCQAIQEAQASGVPTIGPRA GGPVDLIEEGYNGLLLDVLTFVEDLPNAVDALLNPEIHEELRENARKSIASKTWPALCEQ LLGYYEEVLEGVREVPLTILGQRPELPRWAARALGARVA >gi|227860851|gb|ACLH01000069.1| GENE 30 33842 - 34285 346 147 aa, chain - ## HITS:1 COG:no KEGG:cauri_0346 NR:ns ## KEGG: cauri_0346 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 147 1 147 147 283 100.0 1e-75 MPRRRVRQLILVLYAAALVGMAGMVIGPFLNDRTIGANPGRALATVTDVGTLRTFVDFQD SEGIYHTPPTGLLYPTELGEGQQVWVLYAKNNPDLVKVEGREWTLSIIPALSSAAVATLI AGALWWGSGKINRNLARALPAEHPGKE >gi|227860851|gb|ACLH01000069.1| GENE 31 34286 - 35986 1661 566 aa, chain - ## HITS:1 COG:Cgl0460 KEGG:ns NR:ns ## COG: Cgl0460 COG1165 # Protein_GI_number: 19551710 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Corynebacterium glutamicum # 21 560 6 538 543 577 58.0 1e-164 MQAMPNTESRSEKTAAGQPESMQLAEALAAQLSRHLTDVVICPGSRNAPLSLALLARSDI RVHTRLDERSAAFAALGMARVQRRHVGIVMTSGTAVANALPAMVEAHYSHTPLAVISADR PARLVGTGASQTIEQPGIFGVYAETTQVETTGDIPLIAERFLNDRQVHINVALDAPLVGK ELPGTPTDYTQNRARTPRWSNHGEVAVDLSRNTLVIAGDEAWEVEGLEDVPTIAEPTAPA PYHPVHPAAAHLFRRAQVSANDYVVNTKVEQVIVVGHPTLHRGVLALLSDPDIDLICLSR TEDFTNPRGEAAQLGTTVKTSGEPTREWMKICEGAAQMAAEGVREVLAETAGEEATKPEI GFTGLHVAAAVGDTLAVGDTLVLGASNAVRDASFIGLPFDGVETYSPRGAAGIDGTIAQA IGIALATQSREADAPRAPRTVALMGDVTFLHDATSLILPADNPRPENLTIVVSNDDGGGI FEVLEQGREPLRGSFEKAFGTPHGVGVAKLAEACGAEHREVSSAQELLDVLAELKEYSIG ITVVEAHTTRSSRRALQEALNAKVGQ >gi|227860851|gb|ACLH01000069.1| GENE 32 35970 - 36572 814 200 aa, chain - ## HITS:1 COG:no KEGG:cauri_0344 NR:ns ## KEGG: cauri_0344 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 200 11 210 210 234 100.0 1e-60 MTNNNGDNETRQFGRVNGENETRQFGAPQQQPPQRPQQHFPEPGSQNTQAFGQPYQQGYG QNYQQPQYDPVPSSYQVEQPKKGGGALSYVFAAIAALAVVIAGVLFFLWRGAAADADKPA PEPVTETVTTEVPTTVTTTKSSPRDNLPTDIPTELPTELPPDIQDRVERGGDDIDGLIND LFEQFDSGMEELGAGDAGNA >gi|227860851|gb|ACLH01000069.1| GENE 33 36583 - 38934 2185 783 aa, chain - ## HITS:1 COG:DRA0188 KEGG:ns NR:ns ## COG: DRA0188 COG0178 # Protein_GI_number: 15807854 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Deinococcus radiodurans # 3 767 96 906 922 724 50.0 0 MTISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFA RRLIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGDNPEG LYSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAIAAWPGAWAGKNFHDI LQELGYDLDSPWEDLPKKDREWILFTEERPVVTVKPRRGADQIQRNYEGTWRSVASYLTK TYAETKSDTLRARVLSFMETRRCDTCQGRRLTAKALKVTYAGLPIDEFNALPLSEAYELL NGQSPQPNDAEDLLLKALLPAFESALELGLGHLSLDRPTDTLSGGEVQRLRLAAQLRSGL YGVTYVLDEPSAGLHPVERGAVLDVCRRFIAEGNSVLLVEHDMELVKQADWLVDVGPLAG ERGGQVVYSGPVADYIEAADSADTPTARALARPRPTPKADARPAHGEIPLRQVHSHTIDG LDVDFGLGQFTAITGLSGSGKSTLLAALHDMLTGPVCPEQVKRVVSITQKPIGRTPRSTV ATYTNLFDNVRKLFAATPEAKKKKWTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYT QCPDCQGQRYNDDTLSIRWQGRTIADILDLTVEEALEVFADEAPILHALQTLEAVGLGYL RLGQGAPELSGGEAQRIKLATELQRSRNSRRGHTVYLLDEPTVGLHPADIDLLITELHSL VDASHSVVVADHDRHLIAGADRVIEMGPGSGVEGGQIVADGTPAQVAAGETPTGRVLSGA GAR >gi|227860851|gb|ACLH01000069.1| GENE 34 38983 - 40038 1199 351 aa, chain - ## HITS:1 COG:Cgl0459 KEGG:ns NR:ns ## COG: Cgl0459 COG4948 # Protein_GI_number: 19551709 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Corynebacterium glutamicum # 13 351 1 335 338 405 67.0 1e-113 MTGVALNPPTRTMNLMHIDDVLDRAHVVSLPLAVKFRGITTREALLIDGPAGWGEFAPFL EYGAEESARWLAAGLEAAYEGFPEPVREWVEVNGTIPAVPAEQVPEVMERYPGCRTFKIK VAEKGQTLEDDIARVHAVRSHIEAQGRVPVLRVDANCGWSVEEAVTAAKELMPLDYMEQP CQTVEELKEVRTQLMRAGIFVRVAADESIRKASDPYRVAELQAADVAVVKPAPLGGVRKV LEVASHLRERHMDITVASALDTSVGISMGLAAVAALPQIYDDEDIDVTPAAAGLATGSLF LEDVTAPRELVDGHLRAEALAPDPDRLSALAAPGERREWWFERVRQCWPHL >gi|227860851|gb|ACLH01000069.1| GENE 35 40093 - 41502 2012 469 aa, chain + ## HITS:1 COG:PM0230 KEGG:ns NR:ns ## COG: PM0230 COG3069 # Protein_GI_number: 15602095 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 4 459 3 438 449 190 32.0 7e-48 MLYLLIALLAIAAVVYLIYKKVHAAASIFAVGVILLMLAALTGRADFRTTEIEATGNAFY DQLLVVDALFKARFSGIGMAIMVLFGFVSYMRHIGADAKTVVVLSSPLKRFKGSYWLVPV GFILGTLLSLVIPSAAALSLLLVATLLPALIAAGLTPLTVGAIVVTSSTIVPTPLEAGLI QGADLTNMTPTEFVYGAVAHATVPTLLITAFVHMWWQRHCDKVDARKAESSGEVTADSMS DEATKEAIARAASLPGYYAVLPLMPLLLIIVSAILKQMGVIPFEGGILPVTVVSLFIAMI IESIRKRTVTGAVDSISSFFKGMGEGAAGVVALLVAAAVLVEGITQMGVIDMLIDAAEGS SGAAVLIVLVFVAATAAMAALTGSGTAPYFAFSEVVPNLASQTSIHAPQMLTAIWGTSNL MRQVSPVNAAVLIVSGAIKVNPIQLVKRTSVPMIVATVLNTLFAFMFIG >gi|227860851|gb|ACLH01000069.1| GENE 36 41566 - 42168 549 200 aa, chain + ## HITS:1 COG:no KEGG:cauri_0340 NR:ns ## KEGG: cauri_0340 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 200 9 208 208 309 100.0 5e-83 MRKFSTLSFLVAAGIALSACGDTSDSSTPASEASADSQLTSVAASVTASTSEAAEDSGPA PTLNDAPSDTPATDDNANPNPGGHNINVGQVGGACGYTNQGDKIHAGENTSCEFAAAMFD EAIKHTFTWSQRSSTVNGSYNTHISAASPATKQTYDLYCAMGSDTRTFYCGIDGDNSVYA SFEEANSQTWTNRLSTEGQP >gi|227860851|gb|ACLH01000069.1| GENE 37 42330 - 42791 688 153 aa, chain + ## HITS:1 COG:no KEGG:cauri_0339 NR:ns ## KEGG: cauri_0339 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 153 1 153 153 241 100.0 6e-63 MLLAEALAERAQAQERLNSLSDRLAATVRIQEGDEPDENPTDLLRELEGVTKRIDELVIA INATNTATAFDDEITLMEALALRDGLLRKRRIYQGLAERAGARHDRYSRSEIKFVATVPV PKLRERADDLARQYRELDTRIQQLNWNTELITK >gi|227860851|gb|ACLH01000069.1| GENE 38 43136 - 44116 1275 326 aa, chain + ## HITS:1 COG:Cgl0456 KEGG:ns NR:ns ## COG: Cgl0456 COG0447 # Protein_GI_number: 19551706 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Corynebacterium glutamicum # 6 326 3 319 319 558 86.0 1e-159 MSEQKNYSTDNPFKPELWQPVKGFEDLTDITYHRLISDGPKPQRKDGIVRIAFDRPEVRN AFRPHTVDELYRALDHARRTPDVGTVLLTGNGPSQKDGGWAFCSGGDQRIRGRSGYRYAT EHAHDDATADESTVDTAREKVEGGRLHILEVQRLIRTMPKVVIAVVNGWAAGGGHSLHVV CDMTIASRQEARFKQTDADVGSFDAGYGSAYLAKMVGQKYAREIFFLGRTYDAQRMYEMG AVNEVVDHADLEDAAIKMGREINMKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYM TDEAVEGKESFLEKREPNWDDFPYYY >gi|227860851|gb|ACLH01000069.1| GENE 39 44143 - 44304 194 53 aa, chain + ## HITS:1 COG:no KEGG:cauri_0337 NR:ns ## KEGG: cauri_0337 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 53 1 53 53 70 100.0 2e-11 MLYFAIALAAIALIAVIASRVWMLRRIQQAQRDGERPFDQEDELINPYEHRGR >gi|227860851|gb|ACLH01000069.1| GENE 40 44316 - 45464 1202 382 aa, chain + ## HITS:1 COG:Cgl0445 KEGG:ns NR:ns ## COG: Cgl0445 COG0318 # Protein_GI_number: 19551695 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 3 378 5 374 376 448 65.0 1e-125 MTILSPLPVNPHDPAAILPDLEAAIAGQATFLPVPAEDRTRAQLLRNHMRAGEPIDSPIA LVVATSGSTGTPKGAQLTAANLVSSADATHRALGGTGQWLLAMPASHIAGIQVLVRSLVA GVEPLCLDLSEGFSIPNFARAAHELAATGDRSYTGLTPMQLAKAMDSLEGIEALRTFDAI LVGGAATHPQLLDSAKKLRINIVTTYGSSETSGGCVYDGRPLDSALVRIGEENRIYLGGP MIAQGYRNVDSDAFMVDESGTSWFATSDAGALHDGHLTVTGRLDNILNTGGLKLHPEQLE QHILRVPGVEGVCVVGIPHPRLGQMIVAAYTGWADVGDILVALDDVGLPRWHIPKDFKRL PELPTTGPGKVDRLAVARTWGS >gi|227860851|gb|ACLH01000069.1| GENE 41 45461 - 46150 579 229 aa, chain - ## HITS:1 COG:Cgl0623 KEGG:ns NR:ns ## COG: Cgl0623 COG1321 # Protein_GI_number: 19551873 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Corynebacterium glutamicum # 1 222 1 222 223 215 52.0 6e-56 MHISELPERTQDYLKILWTYEEKEGANTAMPLGDLAKAAGQKLPTTSEAVKRLAAKGLVE HERYFGVRLVEEGRRLAVAMVRRHRLLETFLVRTLGYTWDEVHDEAEMLEHATSDRLVER LDSFLGNPARDPHGDPIPAPDGTAEPVSRITLIDVPAQTPVTVEQVTDADGEFLRYLDKN GVRPGVEVTVVAPSVAGVLEVAVDDGSHFPLGESAARGIAVRSFGEAEV >gi|227860851|gb|ACLH01000069.1| GENE 42 46258 - 47184 1071 308 aa, chain + ## HITS:1 COG:BS_ytgA KEGG:ns NR:ns ## COG: BS_ytgA COG0803 # Protein_GI_number: 16080129 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus subtilis # 6 307 4 305 306 162 32.0 5e-40 MKKLIALPLASLVVASTLSACTSSDSTEAQNDNLTIFATTGYLADAAANIAPDADITTMV GPGGDPHTYQPTTRDIEKMQDADLVLWNGLHLEAQMVDQLSSLGEKQLAVGEQLDTADLL PWPEQGDKGEKLYDPHIWNSPELWSQVVDHIGTKLGEIDSDNAEDYAAAADAYEDKIAAA HDKAAKELESASPRVLITGHDAFNYFGKTFDFEVQATDFVTTEATKSATEISELADTIAE KKVPVIFQDNQANPQAITSLKEAVETRNWTVTISDEELFADTLGPEAPTDTYLGAFEHNA SAVAKALS >gi|227860851|gb|ACLH01000069.1| GENE 43 47184 - 47894 204 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 222 1 226 245 83 26 5e-15 MLSVGNLTAGYPRTPVLHDASFTLTPATITGLVGANGSGKSTLVRTLVGLLPPLACGSMT FDGVDLAHFRQRLGYMPQHADIDWNYPATAFDIALMGRTAGLRWWQWPSRADKDAAHAAL SRTGMQAHAQLPISALSGGQRQRVLLARTLVSEPEFIILDEPFAGVDAASQRAIMDVLKE LRENGVTILLVHHNLAEVADFCDEVLMVGHGRLIAAGPTEQVLTESAIADMFSLPS >gi|227860851|gb|ACLH01000069.1| GENE 44 47891 - 48745 537 284 aa, chain + ## HITS:1 COG:BS_ytgC KEGG:ns NR:ns ## COG: BS_ytgC COG1108 # Protein_GI_number: 16080127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 7 277 9 274 435 147 34.0 2e-35 MNPLELLQNYTYTQALLGTVLIGGCAGALGPLVYVRRTSLLADAISHSSLPGLLTAFLVA TAIGWDGRNVWLLSCGALLTGTLAVGCIHLIPRLTPLGQTTAMAATLTTFFSVGMLLMQY ISRRPLPGKAGIQDYLLGNASTLTRADVRSTLIIGGCVLLFLFLIHTRQAAVTFDSSFAQ VAGIRTSFLNAASFFALTAITVLGVKVVGVVLMVAVVISPAAAARPWTTRLLPFIALSGF FGAATAALGCYVSIAHGPLPTGPVIVLAQAALVTISLTSRKLAS >gi|227860851|gb|ACLH01000069.1| GENE 45 48742 - 49596 755 284 aa, chain + ## HITS:1 COG:BS_ytgD KEGG:ns NR:ns ## COG: BS_ytgD COG1108 # Protein_GI_number: 16080126 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 1 264 1 272 295 124 31.0 3e-28 MTLAATACLLAVLTALACAIPGTFVVLKGQAMLIDGIGHAVLPGIAVGYLFTADLDSPIL LVTAAAGALVVALGTDALQRSPLVTADSALGLVFPALFAAGVILISTHMSHVHLDVHAVL VGDLNLAAFSNPNYCYIMAAVLGINALFLALTLPRLSATTFDADFCAARGVPTRVLHIIF MTVVACTATAAFHAAGAMLVIALMVFPTMTARLLTQRVPTLVLTACGVAAISAVVGFWVA YVLDAATSAAMTVTNAVIFVAVLIIYRFRQRTSSLPQHTTPVAQ >gi|227860851|gb|ACLH01000069.1| GENE 46 49602 - 50486 981 294 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 5 293 10 297 298 338 66.0 8e-93 MSAYSATPADWLQGARPHTWANAFAPVIAGTGAAAAAHGLHWGRALLALIVAWALIIGVN YANDYSDGIRGTDDDRTGPQRLTGGGLAKPQHVKFAAFACFGVAAIAGISLSLAANAAWF ILVGAVCIAGAWFYTGGKNPYGYRGFGEIAVFVFFGLVAVLGTEYTQAGRITWTGLALAV GIGGMSAAVNLANNIRDIPSDKATGKITLAVRLGDKKSRTLFMTLLLLPVLLSIGLAFES WAALASLLYFPLALGAIRTVNRGARGPKLIPVLGMAGRAMLMWAVINAVALALV >gi|227860851|gb|ACLH01000069.1| GENE 47 50495 - 50836 498 113 aa, chain - ## HITS:1 COG:no KEGG:cauri_0329 NR:ns ## KEGG: cauri_0329 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 113 1 113 113 190 100.0 2e-47 MSQTENTTNTSQNPEPPQPDPALKRRSRQALWKYGAARVVLFIVLTAVIQLLAMAVLGAF PLLVSALLALFVALPLSMLIFSKWRMEATQTLAEYSAQRKAHKKWVQEELAGR >gi|227860851|gb|ACLH01000069.1| GENE 48 50880 - 51203 363 107 aa, chain + ## HITS:1 COG:no KEGG:cauri_0328 NR:ns ## KEGG: cauri_0328 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 18 107 18 107 107 101 100.0 9e-21 MGRLILLLLFVLAAVLVWKAFGPSSWNKKVQQPQQPQRPAIKGPDDDEEFLWNLEKQRFK ERRAKEREAERQEEERRRRSQGSHGSQKPQAPENKDSEGKDSKGEEA >gi|227860851|gb|ACLH01000069.1| GENE 49 51200 - 51457 347 85 aa, chain - ## HITS:1 COG:no KEGG:cauri_0327 NR:ns ## KEGG: cauri_0327 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 85 1 85 85 148 100.0 6e-35 MAETPKPRHKQGKPAGDNPQLIALGEGFAQRRRELGILQQALAEKAGISRSTLHTIEHGG SGVRWEKVIAVAEALDLEMTFEPKA >gi|227860851|gb|ACLH01000069.1| GENE 50 51458 - 52498 1403 346 aa, chain - ## HITS:1 COG:Cgl0437 KEGG:ns NR:ns ## COG: Cgl0437 COG0755 # Protein_GI_number: 19551687 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Corynebacterium glutamicum # 1 346 2 337 337 390 59.0 1e-108 MQVDQNLSNFSDIAVQTAFVVYALALVLSLVYYGRMHSIIEAMRSRTTAAAQQRELASVG ASADGAVLGDVPPTTSAENVGPDADLDADLAKKRENADKLGGMTQMLLWLGIALHLAAIV LRGLATGRFPFGNLYEYVLMVTAGAMVVATIAMQRKEWRTLWPWLLTPILALMFYGSTKL YAESAPVVPALQSHWLPIHVTVVSLGASIGVVSGIASLLSVLREFQPKGSESGFFGVLAR PLPSAKKLDRLAYRLGVVALPTLGLGIVLGAIWAESAWGRYWGWDPKETVSFATWILYAA YLHARATPAFRKAAPYINIAAMLLMIFNLFFINMVVSGLHSYAGLN >gi|227860851|gb|ACLH01000069.1| GENE 51 52640 - 54271 2252 543 aa, chain - ## HITS:1 COG:Cgl0436 KEGG:ns NR:ns ## COG: Cgl0436 COG1333 # Protein_GI_number: 19551686 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Corynebacterium glutamicum # 3 528 8 527 541 739 69.0 0 MRYIRKAWHWLTSMRTALALLFLLAIAAIPGSLLPQRSLNESNVNDFIETNGKVAEIYDK LQLFDVFSSVWFQAIYVLLMISLVGCIIPRSWDHYKAYRTPPTRAPKYLEKMPLNATGHS EKSPEEIAAATKTMLKKWRVSEVSPDKDRAGAQSFSAERGYARELCNLIFHIALVAILLT MAAGRLVHYEGQVIVVTEKNSQGQTQEQAQSTEFCNTSTSVYDSFRAGPLFDGTGLHPFC FLAHDFTADYLPNGQAEMFTSNVSYAAGDDIFTDPETWEDYQLQVNHPLRIDSNRVYLQG HGFAPTMTVEWPNGEKRTQTIQFQPTDTTFFLSEGVMRFDPPAGMYPDLFERRQNQIAIQ GLFAPTAEWSGESGKLLQSSYPAMLDPAVAIDIYRGDAGLDTGTPQSFFSLDSNLVHTGQ LQKIDRVNLNQGESVTLDDGTKVTFDGASEFANYQVSYDPFQGWVLVSSLVMLVSLVGSL VIKRRRVWVRIRPGANGGTDIEMGGLARTDRAGWSEEFHKLHRELLELPDPDEVEEDELY SAD >gi|227860851|gb|ACLH01000069.1| GENE 52 54284 - 55090 872 268 aa, chain - ## HITS:1 COG:Cgl0435 KEGG:ns NR:ns ## COG: Cgl0435 COG0785 # Protein_GI_number: 19551685 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Corynebacterium glutamicum # 2 268 4 268 268 328 75.0 9e-90 MILAADGMGQSFADAAVSGPLLIGVLAAAVAGLVSFASPCVVPLVPGYISYLASVVGGEV SYDEELGVGVGKRRRWAVVGAAALFVLGFTVVFVLATVSVFGAISALRLNADTLMRAGGI ITILMGVVFMGVVPVLQKDTRMAPRRWTTWLGAPLLGGVFALGWTPCLGPTLAAILSVSA GTEGTTALRGTILIIGYCLGLGLPFLLVALGSAKAMRTVTWMRKHSRAIQIVGGIAMILV GLALLTGLWGEFINAIRQWTVSYGATLL >gi|227860851|gb|ACLH01000069.1| GENE 53 55087 - 55692 669 201 aa, chain - ## HITS:1 COG:Cgl0434 KEGG:ns NR:ns ## COG: Cgl0434 COG0526 # Protein_GI_number: 19551684 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 3 200 2 206 207 239 60.0 2e-63 MARRTIRAAAAGVLAVIALVGCSQSEENAQNAVASGGTFEFISPGGQTTIRYAEEDRKPL KDFSGEDLRNESTTIKLSDFQDQIVVLNSWGQWCAPCRSESDDLQAIHSELQKRKVGTVL GINVKDFNPEISRDFMADNGLEYPSIYDPPFKTAAALGGVPTSVVPTTIVLDKQHRPAAV FLTEITEKDVLEVVDELEKEQ >gi|227860851|gb|ACLH01000069.1| GENE 54 55692 - 56300 720 202 aa, chain - ## HITS:1 COG:Cgl0433 KEGG:ns NR:ns ## COG: Cgl0433 COG0406 # Protein_GI_number: 19551683 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 1 202 1 202 202 270 67.0 1e-72 MSTTIVHFVRHGEVYNPDKILYGRIPGYHLSSRGHSMAARTAKAFEGHDVTYLAASPLQR AQETAMPIAQVTGLEVDVDKGVIESGNRFEGLRTKGWNSQLWNPQRWPLMVNPLEPSWGE PFEEIAARMMDAAERARSKAEGHEAIVVSHQLPIVMVQRTVLGKRLAHAPWDRTCALASV TSLVYRDREIIDIFYSEPAQDI >gi|227860851|gb|ACLH01000069.1| GENE 55 56332 - 57666 1654 444 aa, chain - ## HITS:1 COG:Cgl0432 KEGG:ns NR:ns ## COG: Cgl0432 COG0001 # Protein_GI_number: 19551682 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Corynebacterium glutamicum # 10 432 1 423 434 620 76.0 1e-177 MWAMPNSSQLNQQNTSQSAEWFERATKVTPGGVNSPVRAFGSVGGQARVIARGEGSRLWD IDGNEYVDLVSSYGPMIHGNAHPAIVEAVQKAAADGLSFGAPTEGETLLAEHIVKRTAVE QVRLVNSGTEATMSAVRLARGFTGRAKVLKFEGCYHGHVDALLASAGSGVATFALPDSPG VTGASAADTIVVPYNDLDAVREAFAAHPGEIACIIAEAAAGNMGTVAPEEGFNAALKEIA HADGALLILDEVMTGFRTSYKGWFGVDGVAGDLVTFGKVVSGGLPAAAFGGRADVMASLA PSGPVYQAGTLSGNPVAMASGLASLELANAELYPRLQDNADRLTGLITEALSAAGVEHYI QRAETMFSIRFAEGQGRNFADMQAADTWRFAPFFHALLEGGVYVPPSAFETWFVSDALTD NDFEVIEAALKPAAQAAASAQRPQ >gi|227860851|gb|ACLH01000069.1| GENE 56 57870 - 58343 254 157 aa, chain + ## HITS:1 COG:no KEGG:cauri_0320 NR:ns ## KEGG: cauri_0320 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 1 157 157 110 100.0 2e-23 MASRRILVIFACLPLSACAATQAEPAPRAEPNPTTSAQLPSWKPDAVPQPVNRLGDTTSI APAPAEPEPTAEAPAPAPVVAETPTPRVEVETVTVRAPAPAPAPAPRPAPPQRPKPKLEL PEPPQIPLPPEVQEGLDQLPKLPPLPKAEEIYIDVPF >gi|227860851|gb|ACLH01000069.1| GENE 57 58567 - 60177 1915 536 aa, chain + ## HITS:1 COG:Cgl2939 KEGG:ns NR:ns ## COG: Cgl2939 COG0845 # Protein_GI_number: 19554189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Corynebacterium glutamicum # 12 521 2 572 612 165 29.0 2e-40 MNKKALGITAGAIAAVLLAGGGGMYALTSGSSDIQLTATDVTKTAKEDLISSVSATGTVS AERELSLTTSLTGPIQSLDAKVGDRVEAQQLLGRMDTTETERELEAQRTSQEAGKLEAVH QIEDAQLQLRQLQDSLDQGLNPEVNSAQSAVNSAQTEYAEAQRKLDDALATKGDRPEVAE ARAAVEQARSGVRDAESKSFQSALASIGTATEDPSGINTASAFLSYLDSDEAVQDSERQL KQSEESYGRVLRGIDRELGEQQRATAASYQAVADAERALQASNLAIEQQISSQSQAVNHA VETAASASANNAKENGPLEYRLSQADLRSPLAGVVTAVNGEAGMPAEGPILTVADDSSLL VKSTVKEGDIARIKVGDEVTFTSPSSPGKEFKGKVTFISPTAEQPDAEAGAGGGSGKPTG SSKPEFPVHIRVDGNREGLRLGSTTKVRIITKKDKNAITVPLSAIYEEGGKKNVLVVDNG TIQAREVKVASESDFSAAIASGLKEGETVISQADTHKDMVGMSASVDGSDDAEENA >gi|227860851|gb|ACLH01000069.1| GENE 58 60174 - 60848 271 224 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 220 1 210 311 108 30 9e-23 MSRLIEMRGIVKRFNEGLDSELTVIPGLDFSVEEGEFVAVVGQSGSGKSTLMNIIGLLDR PTAGEYQLAGVDALALGDDKLASFRGQKIGFIFQNFNLIGRMSALKNVEMPMVYAGVSAH ERTQRAEELLEMVGMSDRMNHLPNELSGGQKQRVAVARALANQPEILLADEPTGALDSQT GRMVMDLFHELHRTHGKTILFITHNPELADECSRTVTMKDGVLS >gi|227860851|gb|ACLH01000069.1| GENE 59 60845 - 62140 371 431 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 5 431 7 413 413 147 29 2e-34 MNFAESTKMALTSLRTNKMRSALTLLGVIIGIAAVIAIVTLGHSLQASVQKDLDKVGANN FTVQVKERPEEGEEEEADDPFMGGGFVEDESSMLTPDMLDRAKEVLGDQIAGINIGEYSS YSGTLVVEGESGEETANLLVRPTNPDYVSGSSYSIVAGRFLSEDDIDSSRAVAMLDKETA TKLFGAPEDAIGQYVSFETQEASPIELAVVGVFEEPQTGPLVGGGPSQSAFVPYPLEAEL SDSPGAGTAFSEVTVRGNPDLDKSAVASNLQRVFDSYYKDNPDYMVKVTDFSDDLASLNQ IFTTMSLVLAAIGGISLLVGGIGVMNIMLITVTERTREIGIRKALGARRRDIRIQFITEA IVVCLIGGLIGIAIGTAAGMAGAAAIGALVAPPLWAVILSLLFSLAIGLFFGYYPAGKAA KLDPIEALRYE >gi|227860851|gb|ACLH01000069.1| GENE 60 62528 - 63472 -117 314 aa, chain - ## HITS:1 COG:MT1476 KEGG:ns NR:ns ## COG: MT1476 COG1233 # Protein_GI_number: 15840889 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phytoene dehydrogenase and related proteins # Organism: Mycobacterium tuberculosis CDC1551 # 2 309 165 472 473 395 61.0 1e-110 MRMFKTEAGKALFGGIAAHAFTSLDRPLTASLGIMLAAAAHQWGWPVAKGGSGAIVAALE KALTQKNVTIHTNSPVISKRDIPTADLVLLDLSPQQILSLYGDEMPSRIKKQYSNFRSGS SAFKVDYAISGDIPWKNSHCRRAGTVHLGGNAKETLLSESLRAKGKMPSRPFVLVGQQYM ADPARSNGNLNPIYAYAHVPKGYSGDATGLVTEQIERFAPGFRDQIVMSKSINPQQMESS NRNFHNGDIIGGENDGLQLVFRPRMTTNPYWIGVQGVYICSHSSPPGAGVHGLCGKNAAT AAFRDLQKRIHLSK >gi|227860851|gb|ACLH01000069.1| GENE 61 63539 - 63655 104 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKWAENVLRQEVEVPYVAPDYLSPDVSVDSQMFDSFV >gi|227860851|gb|ACLH01000069.1| GENE 62 64341 - 64715 226 124 aa, chain + ## HITS:1 COG:Cgl1671 KEGG:ns NR:ns ## COG: Cgl1671 COG1961 # Protein_GI_number: 19552921 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Corynebacterium glutamicum # 1 121 60 181 184 121 56.0 3e-28 MDRLARSLIDLHRLVDDLTAREVSVKFLKEGQTYSLTSTPIAKLMLGLLGSVAEFERSII RERQAEGIARAKERGVYKGRAKALTDEQLAQAQEWVGAGVPKAEVARRFGIGRTTLYTYF KQER >gi|227860851|gb|ACLH01000069.1| GENE 63 64759 - 65064 155 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184004|ref|ZP_06043425.1| ## NR: gi|262184004|ref|ZP_06043425.1| hypothetical protein CaurA7_08433 [Corynebacterium aurimucosum ATCC 700975] # 1 101 1 101 101 199 100.0 7e-50 MVPGLLAGVVFYFILTALNWGVETISSKRYRLRAYGRLLFQCLAAIAYTIFLVTAGGGGD SATQMQVSGFILAGCILSLITSITDRPHTREKAQTNEHEDE >gi|227860851|gb|ACLH01000069.1| GENE 64 65146 - 66747 90 533 aa, chain - ## HITS:1 COG:Cgl0771 KEGG:ns NR:ns ## COG: Cgl0771 COG5479 # Protein_GI_number: 19552021 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein potentially involved in peptidoglycan biosynthesis # Organism: Corynebacterium glutamicum # 33 241 140 356 527 106 31.0 1e-22 MKIKNLGIATFAAISSLSIAANSTAIADEFHGYWVKGRILDTYNRLGGYKTFGNANTEER DAARGGKFQNFQNNASIYWHPSVSNGTARQVGGRIRDKWEDYDWEHGHLKYPTTDELPTR TAGGRFNHFEGGSIYWSPATGAHTIQGMIRDRWAAQDWEVGSLGFPTTDERATPNGVGNF NHFEGGSIYWSPATGAHTVQGRIRDYWAKVGWEKSRFGFPVSEEYKVSGGAIQQNFQGED LQWVPSNSSQLAPYNPRYGSYDQQYLLFDQNERWTPQSINREVVTHFNQYFTFTGCPDEI NVGAECVLDTVGGIYAPIRIEAISADGFSIRSLEGHPEGADRLINFKFTTYYYNGATNIR LRVQASGPASRASNLGPFNSETIARYSWSTFSKNLQNRINNASTTYITSDKSTPPAQAFR AISPQDATPPPNDPGVETDVIDPANVDTSKITNKVPLYPIGTDNAELEKSLGTADIPAIS APEETTTLETEIPADNREGSKSPGTTESENIDSKPYKTTTATPNNIGQGLLSP >gi|227860851|gb|ACLH01000069.1| GENE 65 67152 - 67466 431 104 aa, chain - ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 102 51 152 155 88 50.0 3e-18 MAWFVLIFSGAFEAVWAAALDKSEGFSRLWPSVIFFVACAISMGGLGWAMKSIPVGTAYA VWAGVGAVVTVIYSFAAGHEAATVWKVLFLAMIIGGIVGLKVVH >gi|227860851|gb|ACLH01000069.1| GENE 66 67540 - 68379 1113 279 aa, chain + ## HITS:1 COG:MA0614 KEGG:ns NR:ns ## COG: MA0614 COG2084 # Protein_GI_number: 20089503 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 1 272 10 289 300 100 29.0 2e-21 MKIAFLGTGRMGTELARHLLKNHELTVWNRTAERAQPLVDAGAALADSPTAAVEGAEVII TSLFGPDDIREQVIDTNLIPEGVTWIDTTTVSPEAAREFAAAVDSYVHAPVVGSLGPARE GKLGVYVGTPDDDRRELAMTIAELWADENKLIGVESAATAAIGKLLANLALAVTAEGVLE ALHLGESEGLDSEVILEMLDITGLAFMKNMKGPFITGERNTTPGDFTVDALCKDAKLMEM TANKPLPAVAAAIERFEEQQAMGHGDQDFSSIFVFRNKG >gi|227860851|gb|ACLH01000069.1| GENE 67 68420 - 68608 194 62 aa, chain - ## HITS:1 COG:no KEGG:cauri_0312 NR:ns ## KEGG: cauri_0312 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 62 2 63 63 94 98.0 1e-18 MNSNQVQNEDPERDPLALSDAALRLAGHDVTDEHVRQLGREVAAGALSAGEAIARVRPAS LK >gi|227860851|gb|ACLH01000069.1| GENE 68 68668 - 68805 102 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTFAKGVSLLAGHEMTAEQEALVRAVVSGEMTVEEAIAIAKAQVK >gi|227860851|gb|ACLH01000069.1| GENE 69 69024 - 69602 434 192 aa, chain + ## HITS:1 COG:Cgl1647 KEGG:ns NR:ns ## COG: Cgl1647 COG1131 # Protein_GI_number: 19552897 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 1 192 1 191 199 168 43.0 5e-42 MLSIDADYGHSTPLGHLEKDFAPGHIYGLAGPNGSGKSTLLATLGGELAPLDGAVEWDGH PIGTKEQPGAVITVAEPVFLPDLTVGEHLDLMGKAAGVDVAKLCELWTLEPLLPHPASRL SSGQRQRVFLAAQLYQPARAVLIDEPERHLDTAWTEFLASELRYLADEENRCIVVASHSD TITQACDEVVQL >gi|227860851|gb|ACLH01000069.1| GENE 70 69602 - 70618 791 338 aa, chain + ## HITS:1 COG:no KEGG:cauri_0309 NR:ns ## KEGG: cauri_0309 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 338 1 338 338 512 100.0 1e-144 MRTLSRLGDGIWYLILAGIFIGFGYTVWQEVGAVLPIIPARITLTGIAPIAGIVGVLALM VLTEVLYPLRALSRERWVYVDRPRGWLRGTDWITWAQLIGFGVLGLGICVSTGLSPWFAL AVPALRFVVGWRSFTLASLLSAGRTRLVGGSGLGLLDSEVTSDAIASQSAWIPRRAHAPS TLTGLFFRRLGRRWYIGVGALAALGLSLGFAPQLGALAIVGFMSAWSLVGAAVGRAASFG RVSDDAWPDWGLPLIASVGTALLGAGVLLLVWKLSAIAVALIIAGLSWASFKRSRPAQVD SMSMLDSGGFGVSFSPEVLHYIARGALGLGVAALALGY >gi|227860851|gb|ACLH01000069.1| GENE 71 70703 - 72214 1546 503 aa, chain + ## HITS:1 COG:SMa2385 KEGG:ns NR:ns ## COG: SMa2385 COG0488 # Protein_GI_number: 16263742 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Sinorhizobium meliloti # 1 487 1 510 529 250 35.0 5e-66 MPISFSHLTVVWPDGTPCFTELTGTFSSHFMGLVGANGSGKSTLAKVLAGLIAPSSGTVS AGSVLYVDQDLGLHTSDTIADVFGATDVLSAIARIEAGEYSEELAATVGEQWDLAERIEG ALDAAGIPFPLDRTIGTVSGGEAVTVALTAAFFRKPDFLILDEPTNNLDSESRQRLLELI RTAPMPVLVVSHDRELLEHADSIAELYHGTLREFEGNYSSYRAAIDAEQDSVQAKVRETK AEHRKQIRERAAMQTRIARDARRGKNFAASKRKPGMAMGLDKNRSERSAAGRSQQANDAV AAAQSAHDKAQRALRDDTHVHIDLPGTELPAGTRVLVSDLLSITGPERVRLAGPNGSGKT TFLNRVAQGDVEYALPCGYIRQRIVLPAEKSVFDIVREANPSADPQFLRDQLAQILFIND KIHQPVGQLSGGECFRVEIARVLLSDPAPRFLLLDEPTNNLDIPTTDWLVEVLTSYRGAF ILVSHDEHVCEQLNLTRTVHVAP >gi|227860851|gb|ACLH01000069.1| GENE 72 72282 - 72539 358 85 aa, chain + ## HITS:1 COG:yefM KEGG:ns NR:ns ## COG: yefM COG2161 # Protein_GI_number: 16129958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 83 10 92 92 77 51.0 4e-15 MKTMSYSESRARYAEVLQSVVDDREEVIITRSGHESAVIVSLDDYNSLRETAYLLRSPRN AQRLLDSIESLNTGEATEHELIEED >gi|227860851|gb|ACLH01000069.1| GENE 73 72545 - 72799 187 84 aa, chain + ## HITS:1 COG:SP1740 KEGG:ns NR:ns ## COG: SP1740 COG4115 # Protein_GI_number: 15901572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 84 1 84 84 95 54.0 2e-20 MILSWTEEAWEDYLWWQAHNKKILKRINSLIKDIARNGNEGIGKPEPLKFELAGFWSRRI TEEHRLIYRIKGVTIEIAGCRYHY >gi|227860851|gb|ACLH01000069.1| GENE 74 72994 - 74376 1940 460 aa, chain - ## HITS:1 COG:Cgl0431 KEGG:ns NR:ns ## COG: Cgl0431 COG1232 # Protein_GI_number: 19551681 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Corynebacterium glutamicum # 1 459 1 447 448 439 58.0 1e-123 MKIAIIGAGLAGLTAAWEIKQNTEGSHDIFVFEAADRIGGKLHTVAFNGGPTDMGAEAFI RRRQDAVDFFTELGLQDSFVEPNPELRPRVYTGGELHFLPQGGVMGIPSEPQDFFSEATN ERITNEQPFEWEIGGDVSVGQLVRQQYGDDVVDHVVSALLGGVYSCSADDLGLRATVPHL AATLDSLAKDGPVTLSAAIKQIESGRSPAEGSVFGTFKGGYAELYEALAEKSGAQIHLDT FVSGVTRKGDAFEVKGAPGDIGPFDRVLFATPAPTTARLLKAVAPEAAQELSTVQLASSV VVGFNFASATDPEGNSLPEATGILVASDEPGVHAKAFTLSSNKWPHLNEREGFLVRASFG RFGDDALVRAEEDDLVDYALDDLQKITGFDGRAAGVEEIYTQRWFGGIPRYDEKHLATVA AVRAKLADVPGIATAGAWADGVGVPAVIAGARAAAQALVS >gi|227860851|gb|ACLH01000069.1| GENE 75 74377 - 75426 1297 349 aa, chain - ## HITS:1 COG:Cgl0430 KEGG:ns NR:ns ## COG: Cgl0430 COG0407 # Protein_GI_number: 19551680 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Corynebacterium glutamicum # 7 346 29 373 374 504 73.0 1e-143 MDGMSRLSDAPLIAAATGHTPSRPPVWFMRQAGRSLPEYRKVREGISMLDSCFMPELLAE ITLQPVRRHDVDGAILFSDIVVPLKAAGVGVEIVPGRGPVMDAPVRTKEDVANLPILDVD VPEVRQGIEIILNELTDKQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHSDPDTWHR LMERLTPTIISFLELQLDAGIDAMQLFDSWAGYLNERDYREFVLPYSEQILKVAEGRVPR IHFGVGTGELLGAMSEAGSEVMGVDYRVSMDAAAARVNADILQGNLDPALLFAGEDAVRK EVRAIKAEVDAARAAGNLRGHIWNLGHGVLPTTEAEAVTRAVAIIHEEG >gi|227860851|gb|ACLH01000069.1| GENE 76 75456 - 75953 547 165 aa, chain - ## HITS:1 COG:no KEGG:cauri_0303 NR:ns ## KEGG: cauri_0303 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 165 1 165 165 290 100.0 1e-77 MSERPGPADYNRRPRRHKKQGEQDFSTWPSQLRIAYWVCVIAAVVMLTAGMVGLFGSYTS VTNTQLSPEQVDYIRFNTRFAAISNVVGAVVIAACSAQLASGSIWARRIITAVSAYIMFV SIAALIAGVGGLLLLLIPMALMVAIYFLFHPDSTAFIKARRAQNS >gi|227860851|gb|ACLH01000069.1| GENE 77 75950 - 76663 851 237 aa, chain - ## HITS:1 COG:no KEGG:cauri_0302 NR:ns ## KEGG: cauri_0302 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 237 1 237 237 404 100.0 1e-111 MTFSPNTASSAKQPAGQDKEPEKEQPKRTEAVSLMLKVWTVALVFEVVHLVLSIVLTLLN REELFAQARTTAESAAEKSGQDVSDALVQLVGYGSVAFSSLISLAIVVLLGIMLGFIHKN SKAAGTGRRLWFAFSLYFALRVLIVFISSPAGASAPDWLFLLDGAVQILVGVAAVMGLMF STKEEVLEYTGEMEQLRQMRKEMEEQRRQENLEEREKKNKDNKEKDREKEDSKGGKR >gi|227860851|gb|ACLH01000069.1| GENE 78 76674 - 77651 1300 325 aa, chain - ## HITS:1 COG:Cgl0426 KEGG:ns NR:ns ## COG: Cgl0426 COG0113 # Protein_GI_number: 19551676 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Corynebacterium glutamicum # 2 325 10 337 339 459 72.0 1e-129 MSIARRPRRLRQNPAFRDLVAETSLRPSDLILPMFVVDGLNEPRDIPSMPGVQQHSLDSL KRAAHEALDAGVTCVDLFGVPREEDKDATGSVAWDPQGILNVAIAELRQEFGDDLIVMAD TCLDEFTSHGHCGVIDDQGRVLNDETVELYQDMARSQARAGAHMVSPSGMMDGQIAAIRE ALDEAGHEDVAIMAYSAKYASAFFGPFRDAVGSSLEGDRRTYQQDPRNFRESMLEVDLDI EEGADIVMVKPGLPYLDVLAGAVERSSVPVAVYQVSGEYAMIQAASQNGWIDGEAVMLES LTAFKRAGADQILTYFATDAARLLK >gi|227860851|gb|ACLH01000069.1| GENE 79 77737 - 79419 1846 560 aa, chain - ## HITS:1 COG:Cgl0424_2 KEGG:ns NR:ns ## COG: Cgl0424_2 COG1587 # Protein_GI_number: 19551674 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Corynebacterium glutamicum # 281 546 1 266 279 387 78.0 1e-107 MSNAVPDTQPELGKSDLGKVVFVGAGPGNPDLLTVRAREVLETTANVVTDAAVSQGVRDM VAQQVPVPQELLDAAEEEYERICAAAKEAGARRKPPRPAPPTAAVFEEVEGDVVKQLRAA LERAEGHDVIRLVTGNPLNRESIKAEITAVASAGMEFQVVPGMSLPSTVPSFAGIALGAT YTEADITEGADWDALASATQPLVLQATADDLPVISAELVERGMPAETEAYVTVHGTTRLQ RTHETTLGTLGKLDAELPGELVVTLGRSFDDRSKYSWWENRSLYGWRVLVPRTKEQAAAM SARLASHGAIPQSVPTISVEPPRNPAQMDRAIKGIVEGRYKWVVFTSVNAVSAVWKKIAE LGLDARDFAGVHLAAVGQKTADAIRAKGMVPELLPPATKQNAEGLVEVFPNYVEDIDAVG RVLLPRADIAGEALVTGLLDLGWEVDDVVAYRTVRAAPPAAEIRDMIKTGGFDAVAFTSP STVRNLVGIAGKPHARTIIACIGPSTKAAAEEVGLRVDVVPEVADVPMLVDALAEHVAAL RAAGNLPAPRKKRRSRKKTA >gi|227860851|gb|ACLH01000069.1| GENE 80 79598 - 80488 1173 296 aa, chain - ## HITS:1 COG:Cgl0413 KEGG:ns NR:ns ## COG: Cgl0413 COG0181 # Protein_GI_number: 19551663 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Corynebacterium glutamicum # 2 294 3 299 302 341 64.0 9e-94 MLKIGTRGSLLATTQSGHVQEWLQQKGYEAELHIVTTQGDVNMAPVERIGVGVFTQALRE AVDRGECEIAVHSFKDLPTAADERFDLVVPQRQDVREALIARDGLTLKELPEGARVGTSA PRRISQLRAMRPDLDIRPLRGNIDTRMGKVTSGELDAVLLAYAGLVRAGYAERATEVFDP EVFMPAPAQGALAIEAVKGTEAAKAIALLADGPATAATRAERTVLSQLEAGCTAPVAATS HWEGEQLVVRGGVFALDGSRQLIAQAQGAASEAEELGRAVSKELFAQGAADVLAAE >gi|227860851|gb|ACLH01000069.1| GENE 81 80489 - 81865 1421 458 aa, chain - ## HITS:1 COG:Cgl0412 KEGG:ns NR:ns ## COG: Cgl0412 COG0373 # Protein_GI_number: 19551662 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Corynebacterium glutamicum # 23 444 1 426 441 413 57.0 1e-115 MSVLVVGMSHQSAPVALLEKLSMDETVQNDTCRAMVSAGSLSEAMIISTCNRLEVYTVTN SFHSGVQDVVHNLAEVSGVEEEKLRSYLYVRYADAAAEHLMMVTSGLDSMVVGEQQIIGQ VRTAYQFASEQGTVGPRIHALAQSALRTGKRVHSETEIDEAGSSMVSFAFDQALSRMGRE DLAGKRVLILGAGAMASLAATHAGRLGAHLIIANRTIARAERVAQHAHEAGVYADVIDFS ERAQALRDVDVAISATGAQGFTITAADVERYHVADRELMLVDLSLPRDIDDAVAEAEGVD LINIERLNNSLQAADTDLAAGTSPHAQARRIVSEELESYASEQRVRDVVPAVSALRKRAA NLVQCEVARMEQKHPELDERQMGDINRALKRVADKLLHEPTVRAKQLAANSGTVSHETAL QELFGLQLEGSGVAVDMAELPDAAQMEAAENTKEEKDA >gi|227860851|gb|ACLH01000069.1| GENE 82 81971 - 82210 304 79 aa, chain - ## HITS:1 COG:Cgl0411 KEGG:ns NR:ns ## COG: Cgl0411 COG0526 # Protein_GI_number: 19551661 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 78 5 82 82 100 61.0 9e-22 MSHVVELMVRTTCGSCARVLEQITPVVQQAGAELKVRNVDEDAELAMEYGDRVPVVVIDG EEFSCWEVDNEELAQALME >gi|227860851|gb|ACLH01000069.1| GENE 83 82278 - 83333 1299 351 aa, chain + ## HITS:1 COG:Cgl0409 KEGG:ns NR:ns ## COG: Cgl0409 COG0560 # Protein_GI_number: 19551659 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Corynebacterium glutamicum # 17 351 17 351 355 464 68.0 1e-130 MKAERVPLPLPPGMPDSPREFLANWTASRGNLRNFLEQQAFAPLGEEHQRAAGEASAAAA VEHLFGIDLEAFSSGVDSVRGSFESAGARSITEPDPDIPQDVGAAAFFDVDNTLVQGSSL VSFALGLARRRYFKLSEILPIAWKQLKFRVSGSENAADVAAGRVQALEFVKGRSVEEMVA LCESIVDQSMARKAYPGTKQLAQMHLDAGQQVWLVTATPVQLAQILAQRFGFTGALGTVA EVKDGRFTGRLVGDILHGPGKKHAVAALATLENLDLERCTAYSDSANDVPMLSMVGTPVA INPDSKLRDIAEEKGWLIRDYRSVRKAVRTYGLPALATALFSYGSWRFVRR >gi|227860851|gb|ACLH01000069.1| GENE 84 83330 - 83908 561 192 aa, chain - ## HITS:1 COG:Cgl2859 KEGG:ns NR:ns ## COG: Cgl2859 COG4894 # Protein_GI_number: 19554109 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 9 190 7 182 182 85 30.0 5e-17 MLPRLLTLDSLVISQTKSFMQDEFLIADEQGVPVGTILQSTSLKDMFFNSSRSLEVAFTD EQGNPQQPLMVIKDPPNFVRDTYEVYLPGVEKPMAVVTKKFSLLKTRLSLEMEGFPEIEI EGDVWDWNITITSQGQPLAEVRNEWGGVGRFLAGKNTYRLSIAPGLDPQQHAGLIGAVMC MDMLRTKAQSSD >gi|227860851|gb|ACLH01000069.1| GENE 85 84141 - 85325 1013 394 aa, chain + ## HITS:1 COG:no KEGG:cauri_0294 NR:ns ## KEGG: cauri_0294 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 394 28 421 421 758 100.0 0 MNPDCALAVERSAARRADYRSWVAAMPDLDEDFDVACQRLVAKLGVGDYTVSECCLAVHR LTELPQVKALQDSQFLLDMKALITIDRTLTKLGALPPETLALIDDALITFFTPTSPNQVF PTPAQIGRKLRDICKSIDKTFSFRESPKKDSYTFTDTGQRGILELNTDSATGMILDGYIK QAAKENGLSQADALKKLIAGSISPPVTVILHTYQASDIDNAPTFVQGYGWTSQDMPATRT RDLSSQPPESRSYIASELIRKYVEGRDGTCRAPGCNRPAYLCQMDHRVNYADGGATHPRN LASLCQHHHNMKTDGRAHYIMDPHTGDIVWLYEDGTWAMTEPTGPLAKKTKRWAQTVAQK ISATRERAQQEAQEAQAAAEEPRTPASPQEDIPF >gi|227860851|gb|ACLH01000069.1| GENE 86 85444 - 85545 216 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSVIKKRRKRMSKKKHRKMLRRTRVQRRKLGK >gi|227860851|gb|ACLH01000069.1| GENE 87 85790 - 85978 237 62 aa, chain - ## HITS:1 COG:no KEGG:cauri_0292 NR:ns ## KEGG: cauri_0292 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 62 1 62 62 107 100.0 2e-22 MTNEDKGTFLTIAEVAEIMRVSKMTVYRLVHAGDMPAVRVGRSFRVHESAVKEYLEASVY GA >gi|227860851|gb|ACLH01000069.1| GENE 88 86179 - 86970 791 263 aa, chain - ## HITS:1 COG:Cgl0406 KEGG:ns NR:ns ## COG: Cgl0406 COG0345 # Protein_GI_number: 19551656 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Corynebacterium glutamicum # 1 263 4 271 273 249 56.0 3e-66 MTKIAVLGGGQIGEALVSGLVNAGYDAADIVVTNRRSERGEELKSAYGVSVTSDNAAAID GANYIFACVKPYAIEELLEGLDIPTTAVVVSMAAGLTLETLEKAAGESVPVVRVMPNTPM LVGKGMCTCAGGSHVTEEQQAGVVKLLEAVGEVAVIEEKHIDAATALAGSAPAYYFLVTE ALIDAGVQLGLTRDVAEKLATRTAQGAGTMLAESGKDPVALRAGVTSPGGTTAAALRELE ESGLRGAFFRAAEACTQRAQELA >gi|227860851|gb|ACLH01000069.1| GENE 89 87190 - 88029 1121 279 aa, chain - ## HITS:1 COG:no KEGG:cauri_0290 NR:ns ## KEGG: cauri_0290 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 279 1 279 279 386 100.0 1e-106 MADKKQLTVAELLARNAKDRPGEEKSPRRRRRSLDEGGISVAELTGNLEKVKATPAEAKH SNVSIDETAPVIPAPKKESKEETPKKEAPKQEPAPKKAEKNADDKAQAATVPAEKPSDDD TRVIQKVKDKPEQKADAKEAEKPEVKTATKPEAKSAAPVDEKPQDAAVDTFTTGELEAVD HDVEEYDDYDDEEEEGKLNPFAVVLLALVGIVLGAIVFKGFEILWDRFDRLVVLVLGVVV TGVIVGIVHALRTSRDGLSMFLAAVAGLVLTFGPLLVVM >gi|227860851|gb|ACLH01000069.1| GENE 90 88039 - 88968 812 309 aa, chain - ## HITS:1 COG:Cgl0404 KEGG:ns NR:ns ## COG: Cgl0404 COG0248 # Protein_GI_number: 19551654 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Corynebacterium glutamicum # 29 309 1 281 281 428 81.0 1e-120 MRLGVLDVGSNTVHLVAVDAATGGRPSPMSDWKTPLRLVEQLDKDGNIHEKGMKKLISAV GEAAELGQKLGCDEFIAFATSAVRSATNSAKVLDEVEKQTGVRLEILSGEEEARLTFLAA RRWYGWSAGRITNLDIGGGSLELSTGTDEHPEMAFSLDLGAGRLTHNWFDTDPPQKSKVN LLRDYIDAELVGVADKMRALGPAGLAVGTSKTFRTLARLTGAAPSSAGPYVKRTLTAPGL RQLISFISRMTAADRADLEGVSSTRSHQIVAGALVAEASMRALGIEKLEICPWALREGVI LRRTDKGLE >gi|227860851|gb|ACLH01000069.1| GENE 91 89002 - 89883 706 293 aa, chain + ## HITS:1 COG:no KEGG:cauri_0288 NR:ns ## KEGG: cauri_0288 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 293 1 293 293 554 100.0 1e-156 MNRPKSNEVYLGFPASSPAAASILAGREKAPDFPREWFEFTDPNDPLHVFSIDLTWLESH YACQFGTERCHGIDKQQPDVGCCVHGAYMADETDREQLRDAVARMPARFWQHRPAGVDEF LEHGEPEELEPWLEWDELDGEDGEPEPALKTPLVDGACIFANRAGWPTGAGCAIHQWALE SGEELTVVKPEVCWQLPIRRHEDYEERPDGEEILRTTIGEYDRRGWGNGGEDFDWYCSAD PSCHIAEKPLWKSLKTELIALLGEECYEILATHCEARARSGVEFPRHPADPRA >gi|227860851|gb|ACLH01000069.1| GENE 92 89880 - 90578 1043 232 aa, chain - ## HITS:1 COG:Cgl0399 KEGG:ns NR:ns ## COG: Cgl0399 COG0745 # Protein_GI_number: 19551649 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 231 1 231 232 362 84.0 1e-100 MTTILIVEDEESLADPLAFLLRKEGFDVLLAPDGPSALEQFAANNVDIVLLDLMLPGMSG TDVCKQLRTTSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRGQ DASSEHAEEEPDEQILEGGRVRMDVERHTVLVAGEPVSMPLKEFDLLEYLLRNAGRVLTR GQLIDRIWGADYVGDTKTLDVHVKRLRSKIEAEPSRPQQLVTVRGLGYKFEA >gi|227860851|gb|ACLH01000069.1| GENE 93 90575 - 91840 964 421 aa, chain - ## HITS:1 COG:Cgl0398 KEGG:ns NR:ns ## COG: Cgl0398 COG0642 # Protein_GI_number: 19551648 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 41 420 13 386 386 451 62.0 1e-126 MIVELVLAFLAGVVACGLAIPVLTRFRERMERRRVRDADANQVTSVSQVLHLAVAGSPAG MTVLSRDKEVIFSNPASHEMSMVHDRAVNPDIWKVAEEVFDDKETRTLDLAIPKRRTGNR VIQVRAVVQPLTLNDDRFVIVYGTDESESVRMESARRDFVANVSHELKTPVGGIALLAEA LLEDTGDPEHVEYFGSRVQKEAARMAEMVSELISLSKLQGAEALPEMEPLDLDDVIDEAI TRNQLAADSHHNQLTRGESAGVHVMGDKSLLVTAISNLISNAIHYSPDELPVSVTQKVVG GKVVHIRVTDRGIGIAPEDQKRVFERFFRVDKARSRQTGGTGLGLAIVKHVVANHGGNIK LWSRPGTGSTFTIELPIYTEEKPADNLINRDNIEDGAVSSAAPGLQRAVARVAARRKDKA Q >gi|227860851|gb|ACLH01000069.1| GENE 94 91916 - 92677 1051 253 aa, chain - ## HITS:1 COG:Cgl0397 KEGG:ns NR:ns ## COG: Cgl0397 COG0588 # Protein_GI_number: 19551647 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Corynebacterium glutamicum # 5 252 1 248 248 421 87.0 1e-118 MLVFMSNGKLILLRHGQSEWNESNQFTGWVDVNLTAKGEGEAKRGGELLKEQGILPNVVY TSLLRRAIRTANIALNAADRHWIPVVRDWRLNERHYGALQGLNKAETKDKYGEEQFMAWR RSYGTPPPELEDGAEYSQAGDPRYANLDQVPRTECLKDVVERFVPYFEEEILPRAKKGET VLIAAHGNSLRALVKHLDQISDEEIAGLNIPTGIPLVYEITEDGSVVNPGGTYLDPEAAA AGAAAVAAQGGKN >gi|227860851|gb|ACLH01000069.1| GENE 95 92755 - 94020 1239 421 aa, chain - ## HITS:1 COG:Cgl0396 KEGG:ns NR:ns ## COG: Cgl0396 COG0438 # Protein_GI_number: 19551646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 412 1 412 418 622 74.0 1e-178 MRIAMISMHTSPLEQPGSGDAGGMNVYVLNTARQLARLGVEVDIFTRATRPSQGEVVDVE ERLRVINIVAGPYEGLSKEELPTQLAAFTGGIFNFARCFEVDYDVIHSHYWLSGQVGWLL RDLWDIPLVHTAHTLAAVKNVHRTLDDTPETEARRICEQQLVDNADILVVNTAQETRDLI EHYDASPDNIVVVSPGADTDLYTPGTDRMTERARRQLGIPLHTKVVAFVGRLQKFKGPDV LIRATAELMERDPDRRLRVVICGGASGANSSPDTYHNLARELGVERVVRFLSPRPPQELV AIYQAADIVAVPSYNESFGLVAMEAQASGTPVVAAAVGGLPIAVADGDTGLLVHSHSAQD WADALEQLLDDDPRRISMGEAAVDHAQQFSWAAAATQLENIYADAMSIEIPDCHARRAIG Y >gi|227860851|gb|ACLH01000069.1| GENE 96 94097 - 95809 2375 570 aa, chain + ## HITS:1 COG:Cgl0395 KEGG:ns NR:ns ## COG: Cgl0395 COG0318 # Protein_GI_number: 19551645 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 1 566 1 566 568 867 72.0 0 MSAYESKAWLQYYPEWTPHSLEYGDTTLLDVYDNNLALHPDKPATYFFGRTQTYAELDKQ VRRAAAGLRAFGVRPGDRVAIVAPNCPQFISAFWAVLKLGAIAVLHNPLYTAHELEGLFK NHGARIAIAWDKTASTLEKLRPTTSLETVVSINMINAMPTPQRLALRLPIPPLKSKRDQL TAPAPNTVPWESLVGNAIGGDGSDVITPEEVTKDTTALILYTSGTTGSPKGAELTHGNLF SNLLMGKHWVPGLGDSPERMLAALPFFHAYGLTMNATLAPLIASELVLIPSPQMPLIMDL MKKHTPTWVPGVPTLYERIVAKAEENDVSLDGVRAAFSGASTLPVNTVEKWEKYTGGMLV EGYGLTECSPIIVGNPMSNDRRPGYVGIPFPDTEIRIANPENLDETMPDGQEGEVLARGP QIFKGYFGDEEATEKAFHNGWFRTGDMGVMEEDGFIRLVSRIKEIIITGGFNVYPGEVEE TLLDHPDVAEAAVVGRPRSDGSEDVVACIVLNDGAALDPEGLKDYCRERLTRYKVPRTFY HFEKLATDQLGKIRRREVQADLLERLKAEK >gi|227860851|gb|ACLH01000069.1| GENE 97 95988 - 97727 2028 579 aa, chain + ## HITS:1 COG:Cgl0395 KEGG:ns NR:ns ## COG: Cgl0395 COG0318 # Protein_GI_number: 19551645 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Corynebacterium glutamicum # 10 575 2 568 568 739 61.0 0 MSESPAQAPSAFESKAWLQYYPEWTKPNLDYGTETLLDSYRETVEEFGERPATWFFGHQM TYRELDTHVRAAAAGLKAFGIRPGDRVAVALPNCPQHVAVFYAILKLGATVVEHNPLYTA AELEPLFQDHAARVAVVWDKASPVFEELRDTTPLETIVTVNMIEAMPRPKQLLLRLPLPI IKDKRAELSIPAPNTVPWSTLTGRAIGGQGQKLQDAKVNREDTALILYTSGTTGKPKGAE LTHSNLYCNMKMAEAWVPEIGKKPERMLAALPLFHVYGLTLIAALGVHIGGELVLTPAPK IPLLLDIMKKRRPTWMPGVPTIYSKVMEAAKEQNIDLHGIENSLSGAAALPEDIVEEWET LTGGLLVEGYGLTETSPIVAANPLNTSRRPGYIGIPFPDTEVRIGNPDNLSETQPDGTAG ELLVRGPQVFKGYFNMPEATEQSFHDGWYRTGDMAIMESDGFIKIVSRIKEMIITGGFNV YPAEVEDVIRQHPDVTNVAIVGRPRADGSEDVVACIILEDGAVLDPEGLKDYCRERLTRY KVPRTFYHFEHLASDQLGKVRRREVQKDLLKLLGEEAPA >gi|227860851|gb|ACLH01000069.1| GENE 98 97724 - 98650 579 308 aa, chain - ## HITS:1 COG:no KEGG:cauri_0281 NR:ns ## KEGG: cauri_0281 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 308 25 332 332 637 100.0 0 MTKLAGKLEEDSSTGMPTIKIAGGFLSIDVNEEMGGLCVLGYWGGAVCFDPDRQPLRMEV NDLNGGVISGSLVAEPCGSSAMHTHLRVFAPPYLPSTATNAQLKSIIAGYAAEMSAVFAR LDEQFPEEPSKPQKGSGLKPVSPHYFSEAYGVSAVGMWRVHERATRLAMIGTPVHVVDHR NGAVSILINEHAITIEAARDGSGDIELSLVTPSGRCACDLDALVRWAEFMNDDQYVYSAR IEVVNLDGGDEQDLVLVTTARIPTKWGYTDEQLDWQLSTLVSQLVGAGEAFYRTFNPTRV MRYIDRAA >gi|227860851|gb|ACLH01000069.1| GENE 99 99035 - 107953 11526 2972 aa, chain + ## HITS:1 COG:Cgl0813_5 KEGG:ns NR:ns ## COG: Cgl0813_5 COG4982 # Protein_GI_number: 19552063 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier protein] reductase # Organism: Corynebacterium glutamicum # 1706 2482 1 780 780 812 63.0 0 MLHSMPRPAVLFAGQGSDWQGFITTAAQTAATADTLRETLAQARSLTGPAARTIASTCPG ALERLEQLIAGSTESTSLDALPAVSIPGIVLGQIAAIEQLRDLGVDIDERAGHSQGSLGA LAVDKPAEALALAILMGTAASAVNGSDPRSQMLSIRGLERSFITEYLHGTAAIAVVNGRR HFALSGSPEDLAATRTAIDEAVKSFNAELEKRTVGGDELNPRFDELPVALPFHNPVLAPA AERTVALAQECGLDVDEARAQAEAILVKEHDWPATLATLNSEHLIVLDRALTNLTRRVVE GTGVTVVSAATPQELNALATPGTELPKALNYADFAPRTIELPNGRTYTQTRFSDLTGLSP IMLGGMTPTSADGEIVAAAANAGHWTEMAGGGMYSDEVFRAHLATMEQHLRPGRTAQFNT MFFDRFLWNLHFGQARIVPKARAAGAAFNGVCISAGIPEVEEAGELLDRLHADGFPFISF KPGTAKQIRDVLAIATAYPEDRIIMQVEDGHAGGHHSWVNLDDMLLDTYAEIRQHPNVYL AVGGGIASPDRATSYLTGEWAKKHAMPAMPVDAVFLGTVAMATKEAKATDSVKDLLVNTA GISPEDNDGWVGRGTGAHGVASSQSHLLADIHDLDNSFAAASRLITSLSIEEYPAHRQEI IDALAKTCKPYFGDVESMTYAEWLERFVELAHPFVDPSWDDRFFDLLHRVEARLNPADHG QIETLFTSVEDVHDAPQAVAKLLAEYPAARSTEVSARDAAWWISLHYKHVKPMPWVPALD GDLKSWFGKDTLWQAQDERYTADQVRIIPGPVAVAGITKKNEPVADLLARFEQATTDALL EQGSTPQKAFSRLNSAADEAAFLRTSPTLLWHGHLMANPAYEMDENAFDLRQDAEGNWEI VITADSYWDDLPEEQRPFYVREVTVPVDLPEDVATGGSPVVSEERLPNSVFTLLEGLAGV GSTAEQGDEITEMPTVDSGYSFHFPASLLSAHSAVTCGDAAAEKAGTPDVLVGPCWPAIY AALGSGRLEDGYPVIEGLLNAVHLDHVIDLRVPLEQLADGRQIDVTSSCTAIEESVSGRI VTVELELKDHASGDIVATQMHRFAIRGRATGTAAPSQAPEWGGGKSATKVVPTPRSFVDR ATVTAPQDMTPFALVSGDYNPIHTSYNAAQLVNLQAPLVHGMWLSAAAQQVAGRHGRVVG WTYSMYGMVQLGDDIEITVERVGRKGIHQALEVTCRIDGEVVSRGQALLAAPATAYVYPG QGIQTEGMGKGDRQASPAAREAWRRADAHTRENLGFSIQKIIDENPTELSVRGTTFRHPQ GVLHLTQFTQVALAVVAYAQTERLRAENALAPTSYFAGHSLGEYTALASLANIFDLEGVI DIVYSRGSAMGSLVPRDAEGNSEYAMAALRPNMAGIAADSVDAWVAEVSEATGEFLEIVN YNIRGQQYSVAGTKKGLKALVDKANAIAPRAAVMVPGIDVPFHSRVLREGVPAFAAKLDE LLPQELDLDALVGRYIPNLVARPFELTQDFVDAVAPLAPSGKLDGLKVEDLSEHELARLL LIELLSWQFASPVRWIETQELLFGKVEQIIEVGLASSPTLTNLATRSLAVAGIPEGTIRV LNVERDQEQVMLADVSEAPAAEPAAESEAEEAPQATEAPGEVAETPAEVAPAPTPAPTTA AASSDAPELRFGAAEAIMVLFAFQNKIRVDQITDSDTVEELTNGVSSRRNQLLMDMSAEI GVPAIDGAADADVATLREKVATAAPGYSAFGPVLGEAVGARLRQLFGAAGLKPTAVADYV TGTWGLPESWVAHVEAEILLGSREEDSVRGGSLSTVPASATSKSAAHELIDAAVQAVAAT HGASVSKGAAAGGAGGGAVVDSAALDAFAETVTGENGVLATVARQVLSQLGLDSEPELIE APDTTVIDAVEAELGSGWLKSVTPSFDANKAVLFDDSWAIARERLARLALGQAEYPVDSF RGAGEDLARQARWWKREDIAQAAVDTTPSAFAGEVALVTGAAPGSIATALVERLLEGGAT VIMTASRVSQARKEFARTLYAEHGAAGSALWLVPANLSSFRDIDALIDWIGSEQRESVGN EVKILKPALTPTLAFPFAAPSVSGSLADASGTTETQARLLLWSVERTIAGLARLSQEDVD KRCHVVLPGSPNRGTFGGDGAYGEVKAALDAILNKWKVEAGWPQGVTLAQAKIGWVAGTH LMGGNDGLVPAAEKAGIKVWSPEEISSELMDLASPESREQAAHAPVEKDLTGGLEGFSLK ELAADVEPAETTGAVPSEDKDASATITALPNQVQAVQPGLEEEVGQVTTDLEDMVVIAGI GEVSSWGSGRTRFEAEYGLQRDGSAELTAAGVLELAWMTGLVEWREDPHPGWFVVENDEE IAEEDIFERFRDEVVARSGVRTLTDKYHLTDRGSIDLTTVFLDRDVTFTVDSEATARDIQ DADPEFVSIVEVDGEWQVTRRQGATVKVPRKATLTRTVAAQMPDDFDAAKWGIPEHMLDS LDRMAVWNLVSAVDAFTQAGFSPAELLRSIHPGQVATTQGTGIGGMESLHKVFVTRFLGE ERPSDILQEALPNVIAAHTMQSLVGGYGSMIHPIGACATAAVSIEEAVDKIALGKADVVV AGGIDDVQVESLQGFGDMNATAETAKMTAKGIDDRFISRANDRRRGGFLEGEGGGTVLLV RASLAADLGLPVLAVVAHAASYGDGAHTSIPAPGLGALGAGRGRENSRLARSLRGLGLTP NDVSVLSKHDTSTNANDPNESELHSLLWPAIGRDEDQPMFVISQKTLTGHSKAGAALFQT GGIIDVFRTHRIPANVSLDCVDPLIAPKAPNLVWLRSPLDLGSAGHSVKAAALTSLGFGH VSALIVYAHPGVFEQAVSQQRGADAASQWRERAEQRLRAGRAHFESGMLGRAPLFEVIEG RRLPTQDAKAAEIAMLLDDSARLTEDGTYPSA >gi|227860851|gb|ACLH01000069.1| GENE 100 108120 - 109316 939 398 aa, chain - ## HITS:1 COG:Cgl0927 KEGG:ns NR:ns ## COG: Cgl0927 COG1295 # Protein_GI_number: 19552177 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 25 371 14 361 368 236 37.0 6e-62 MSEEETRGNAMPAEEPETIVPFKSSTVLEVQGHDDERNPLAKGNRLRKESWGLVIRRTWN DFFHDAFMDRAAGMTYFTLMAFAPTVLAAYSIATLIFSSRQAEVEQLTSEFIEQYVPGSL SEQAHTVVGTIIGSSAQGTLALVISLAISLFSASAYVRAFSRTANTVYGRVEGRGIIRTW ALMWGLTAVIVVGAVIVLFANLLRDAVLNEGLIPLARNVGLEDVATYLVRIFLPVWNWLR FPVTVVVVLTLIAVLYHFSPNVRPGRFRWITYGSVVALVGTVASWGLVGLYLKYFAAASA YGALSTVMAVFVATWLMNTVLIVGLKIDAEVLRAKELQLGLHSERFIQAPPRADNSSQAQ ARAQESLEQRAREISDNARQAQDDLVEEAEGAGKNAPS >gi|227860851|gb|ACLH01000069.1| GENE 101 109401 - 109877 668 158 aa, chain + ## HITS:1 COG:SA1936 KEGG:ns NR:ns ## COG: SA1936 COG1854 # Protein_GI_number: 15927708 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Staphylococcus aureus N315 # 9 158 3 153 156 168 54.0 3e-42 MTEKNSENKINVKSFELDHRLVAAPYIRVADRTDLGGGVEIIKYDLRFCQPNKEHLGTEA LHSVEHMMANFMRNYTDKLIGFAPMGCRTGFYAITNGMEQDELLRAVEGALNDILNATEV PAANEVQCGWGAHHSLEGAQEAARDFLAAKDEWLNVMA >gi|227860851|gb|ACLH01000069.1| GENE 102 109893 - 111011 1356 372 aa, chain - ## HITS:1 COG:Cgl0393 KEGG:ns NR:ns ## COG: Cgl0393 COG0812 # Protein_GI_number: 19551643 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Corynebacterium glutamicum # 1 372 1 366 368 429 62.0 1e-120 MLDKFLTLADIDGVTLDSETTFADLTTLRIGGAPLVTVRCGSAESAVAALAALDDASQDY LVVGGGSNLVVAEGQLDVVVVILDFEDIDVTVANGLVRADAGAVWDDVVALTVECGLGGI ECLSGIPGNAGAVPVQNVGAYGAETSDVLTQVYLYERATRTATWVPAEELELAYRYSNLK FTGRGVVLAIELQLTTDGLSKPLRFGQLTQNPGERRPVADVREEVLKLRRGKGMVLDPQD HDTWSAGSFFTNPIAEPQVADSIQEAVRAARGDEDADRMPRHAAAETTASGERKEKLSAA WLIERAGFAKGYPGEESGAKATLSTKHTLALTNRGEATADDIVALARDIRAGVQKAFGVT LEPEPIWLGVSI >gi|227860851|gb|ACLH01000069.1| GENE 103 111036 - 111527 779 163 aa, chain + ## HITS:1 COG:no KEGG:cauri_0273 NR:ns ## KEGG: cauri_0273 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 163 1 163 163 292 100.0 3e-78 MSTRSENTVIINQPIDKVHKALTTREYWDFIVAKLSPEPGTVHEFTGNTAVLYEILPTSL LPEAVRAMVSQDLKEKRTVTIGELVDEQISVSFTADVKGTPVDFKGDITYKSQDETTVLD YVTEVSVNIPMMGAAIEPKVAEALQELYTNEGKLTEEWISNNL >gi|227860851|gb|ACLH01000069.1| GENE 104 111555 - 112364 658 269 aa, chain + ## HITS:1 COG:no KEGG:cauri_0272 NR:ns ## KEGG: cauri_0272 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 269 1 269 269 503 100.0 1e-141 MADHAHNLRAQESAGRPFGVITRGTTNPNRLRRCDRWMVAHPDISSLLRSTTKPLALDVG YGASHTTTVEWAGWLRSVNPNTRVTGLEISPERVLPPRDGVTFELGGFELAGYRPHLVRA FNVLRQYDVDQVEKAWNTVTSRLAPGGFFVEGTCDELGRRAAWVLLSAAGPRTLTLAWDP FDVERPSDIAERLPKILIHRNVPGEPIHELLQAADAAWDRAAGWSPYGPRVRWRMAREEL RQTVPIHPVNRRLRDNVLTVDWDLVVGQL >gi|227860851|gb|ACLH01000069.1| GENE 105 112388 - 113185 900 265 aa, chain + ## HITS:1 COG:no KEGG:cauri_0271 NR:ns ## KEGG: cauri_0271 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 265 1 265 265 411 100.0 1e-113 MASSKSPASTAWKIFIGVLVALLLIILVAELGIRWFLGSQMKSEFTQSAKEQGVETSEEP EVSFGASPMVFGLLNGKISQMDMKTPSTLKIDGTTITGQPAADIHVEDMTLSQEPVAGTL RASTTVPDQFLLASFQKAIAEQSGYDALGNLVVTAITANDAEDDLEVEFAGGLATLSLKP EARDGKLAIDAKEASLFGFDLPEQATSAISNALAEGMEEQLAGQQLTFESVDVGAGELTL TLIGHDVPMSELDSATAPAQQAPAN >gi|227860851|gb|ACLH01000069.1| GENE 106 113208 - 113657 316 149 aa, chain - ## HITS:1 COG:Cgl0379 KEGG:ns NR:ns ## COG: Cgl0379 COG0274 # Protein_GI_number: 19551629 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Corynebacterium glutamicum # 31 104 56 132 224 65 55.0 4e-11 MLNLLEASVEEVRSQSAGQHRVLVSPHHVLAAEGAEHVIAVAGYPTGRHHSLVKAAEARL AVQSGAAEVWVAVDALLGDATSLLSELVTLREACPLPVRLGLILPEYPALPVVEYVRAAE QAGYQCLIETGSVVSDDEAPDTQLSIESL >gi|227860851|gb|ACLH01000069.1| GENE 107 113657 - 113947 489 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_0269 NR:ns ## KEGG: cauri_0269 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 96 1 96 96 174 100.0 9e-43 MHTFLNIIAAIPQYIFMAVSLFALIGAVLAAMTREDAFRAGDRQNKWVWVGLLFGSALLM NLPLPFVSWIGAIITGVYWFDVRPQLKAIINGDYSY >gi|227860851|gb|ACLH01000069.1| GENE 108 113961 - 114422 707 153 aa, chain - ## HITS:1 COG:no KEGG:cauri_0268 NR:ns ## KEGG: cauri_0268 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 153 1 153 153 194 100.0 8e-49 MSVFDSIKNAGSSAFDVAKDFGGRFKEERQNQAQSAQADRIARAADAAGMGDGTAKEESF FDRVTSTAKNLGESVSSAARETRNSQSFEKAREDFNTAVNETREGVQGAINNAKEQRAEG KHAQQPQEPQSPRNPYAPKPNDDVIDGEVVDEN >gi|227860851|gb|ACLH01000069.1| GENE 109 114438 - 115772 1604 444 aa, chain - ## HITS:1 COG:Cgl0372 KEGG:ns NR:ns ## COG: Cgl0372 COG2733 # Protein_GI_number: 19551622 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 29 443 2 416 417 380 48.0 1e-105 MTHRADAGLEQARETSAAQTSFVPQPGNQEARRADLRRWKAIALSFLIAAAVIFLGCSWW QASASGAPVWVGYVRAAAEAGMVGGLADWFAVTALFRRPMGLPIPHTALIPNNKDRVGDA LKDFVEENFLTADALSAKVREAEIPLWLARQGVEPGRAEEVSAWIGERAASVVADLDPAE AEQFIRTQVMDRLAEPEWGPPLGRLLEGYIAEGKARPLEDDLIEWAHGKILGMESTVVTA IDERMPGWAPRFAREMVGEKVYAELVEFADEVRRNGNHEARLAIRRNLSKLASDLQWDED MRGRIEGIKQEMLASDQAQKAPAAMWATVSSTLIEQLTDPESFLRQKITAKVKELAHRLL EDSEFLAQANELVDKAARYAVEKFAPEIIAIIPETIKRWDAQEASENIELMVGKDLQFIR LNGTVVGALAGLVIYTVNHLLFGV >gi|227860851|gb|ACLH01000069.1| GENE 110 115945 - 117241 1459 432 aa, chain + ## HITS:1 COG:BS_yeeA KEGG:ns NR:ns ## COG: BS_yeeA COG1002 # Protein_GI_number: 16077744 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Bacillus subtilis # 4 429 1 418 879 343 43.0 3e-94 MARLSLKAIEERIKPLAGKDEYDREFIFDLMLAYGRSKGNITRLRNGSLNIADDPAHEVA QKNVIYFRETTGDLLEELERLRVSPTVVKFATRFVIVSDYTKMIAYDLKTTENRAFPLRD IDQHFTFFLPWAGMEKAQYTAESHADVKAAEKMGQLFDELASANPGLMEDTEQRHGLNVF FTRLLFCYFAEDTGIFGENQFTNAVGSHTLEDGSDTADFIRDLFAALDEADPKKKPGHLA DFPYVNGRLFRADAHLTVPRFSPKAREMLIGLGRQIWLNINPDIFGSMFQAVVAPGKRSN LGQHYTSVPNILKTIEPLFMDELKEEFDKAYDSTKKLDKLLDRIARIRVFDPACGSGNFL VIAYKELRRLEHAILQRQSELGSNHALFNESRINIENFYGIEIDDFAVEVAILSMWIAKH QMNREFQEQFGI Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:49:06 2011 Seq name: gi|227860850|gb|ACLH01000070.1| Corynebacterium aurimucosum ATCC 700975 contig00138, whole genome shotgun sequence Length of sequence - 61553 bp Number of predicted genes - 54, with homology - 51 Number of transcription units - 27, operones - 11 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 1424 536 ## COG1002 Type II restriction enzyme, methylase subunits 2 1 Op 2 . + CDS 1434 - 3434 1897 ## cauri_0262 putative ATP-dependent helicase 3 1 Op 3 . + CDS 3431 - 4621 780 ## cauri_0261 hypothetical protein 4 2 Op 1 . - CDS 4849 - 5220 642 ## cauri_0260 hypothetical protein 5 2 Op 2 36/0.000 - CDS 5268 - 6017 967 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 6 2 Op 3 . - CDS 6017 - 8038 2835 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 7 2 Op 4 . - CDS 8054 - 8809 708 ## cauri_0257 succinate dehydrogenase subunit (EC:1.3.99.1) + Prom 8956 - 9015 2.8 8 3 Tu 1 . + CDS 9212 - 10618 1345 ## COG3800 Predicted transcriptional regulator + Term 10733 - 10771 -0.9 + Prom 10833 - 10892 3.3 9 4 Tu 1 . + CDS 10925 - 11023 96 ## + Term 11053 - 11105 21.1 - Term 11038 - 11099 17.3 10 5 Op 1 . - CDS 11121 - 12533 987 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 12643 - 12684 9.4 11 5 Op 2 . - CDS 12718 - 12828 146 ## - Prom 12991 - 13050 3.8 + Prom 13098 - 13157 2.9 12 6 Op 1 2/0.333 + CDS 13192 - 14631 1773 ## COG0627 Predicted esterase 13 6 Op 2 . + CDS 14670 - 15749 1402 ## COG0627 Predicted esterase 14 6 Op 3 . + CDS 15834 - 17192 1620 ## COG0308 Aminopeptidase N 15 6 Op 4 11/0.000 + CDS 17252 - 18256 1013 ## COG1088 dTDP-D-glucose 4,6-dehydratase 16 6 Op 5 . + CDS 18263 - 19627 1504 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 19628 - 19683 6.0 17 6 Op 6 . + CDS 19716 - 21149 988 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 21169 - 21222 15.6 18 7 Tu 1 . + CDS 21274 - 22140 976 ## COG1209 dTDP-glucose pyrophosphorylase 19 8 Op 1 . + CDS 22313 - 23182 1090 ## COG1651 Protein-disulfide isomerase 20 8 Op 2 . + CDS 23175 - 23267 60 ## 21 8 Op 3 . + CDS 23264 - 24058 759 ## COG0785 Cytochrome c biogenesis protein - Term 23942 - 23974 6.1 22 9 Op 1 3/0.333 - CDS 24109 - 24744 876 ## COG0491 Zn-dependent hydrolases, including glyoxylases 23 9 Op 2 . - CDS 24745 - 25896 1388 ## COG1062 Zn-dependent alcohol dehydrogenases, class III - Term 25905 - 25940 8.8 24 10 Tu 1 . - CDS 25963 - 26778 1040 ## cauri_0241 putative secreted protein - Prom 26815 - 26874 3.5 + Prom 26809 - 26868 3.4 25 11 Tu 1 . + CDS 26948 - 28615 1957 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 28702 - 28736 -0.6 - Term 28573 - 28609 5.4 26 12 Op 1 2/0.333 - CDS 28740 - 30884 2434 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 27 12 Op 2 12/0.000 - CDS 30929 - 31693 757 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 28 12 Op 3 . - CDS 31725 - 32882 1040 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Prom 32937 - 32996 4.4 29 13 Tu 1 . - CDS 33060 - 33938 568 ## cauri_0236 putative secreted protein - Prom 34036 - 34095 1.8 + Prom 33896 - 33955 2.8 30 14 Tu 1 . + CDS 34132 - 34587 504 ## cauri_0235 putative secreted protein 31 15 Tu 1 . - CDS 34836 - 35852 671 ## cauri_0234 hypothetical protein - Prom 36094 - 36153 6.6 - TRNA 35995 - 36070 94.8 # Thr CGT 0 0 - Term 35948 - 35989 6.1 32 16 Tu 1 . - CDS 36174 - 37382 1012 ## COG0470 ATPase involved in DNA replication 33 17 Tu 1 . + CDS 37420 - 38952 168 ## PROTEIN SUPPORTED gi|90020820|ref|YP_526647.1| ribosomal protein L19 34 18 Tu 1 . + CDS 39067 - 40359 1194 ## COG2311 Predicted membrane protein + Term 40376 - 40411 0.9 35 19 Op 1 . - CDS 40196 - 40897 779 ## gi|227505641|ref|ZP_03935690.1| hypothetical protein HMPREF0308_1911 36 19 Op 2 . - CDS 40904 - 43864 3816 ## COG0550 Topoisomerase IA 37 20 Tu 1 . + CDS 43988 - 44617 618 ## COG0586 Uncharacterized membrane-associated protein 38 21 Tu 1 . - CDS 44614 - 44817 341 ## COG1278 Cold shock proteins + Prom 44768 - 44827 2.4 39 22 Tu 1 . + CDS 44867 - 47281 2266 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster + Term 47374 - 47402 -1.0 40 23 Op 1 . - CDS 47278 - 47586 250 ## cauri_0226 hypothetical protein 41 23 Op 2 . - CDS 47619 - 47942 274 ## cauri_0225 hypothetical protein 42 23 Op 3 . - CDS 47942 - 48130 340 ## cauri_0224 hypothetical protein 43 23 Op 4 9/0.000 - CDS 48210 - 48767 353 ## COG2064 Flp pilus assembly protein TadC 44 23 Op 5 8/0.000 - CDS 48767 - 49369 216 ## COG4965 Flp pilus assembly protein TadB - Term 49404 - 49439 -0.9 45 23 Op 6 . - CDS 49513 - 50649 627 ## COG4962 Flp pilus assembly protein, ATPase CpaF 46 23 Op 7 . - CDS 50646 - 51566 602 ## cauri_0220 putative secreted protein + Prom 51781 - 51840 1.7 47 24 Tu 1 . + CDS 52058 - 52954 955 ## COG0560 Phosphoserine phosphatase 48 25 Tu 1 . - CDS 52951 - 53697 706 ## cauri_0218 hypothetical protein 49 26 Op 1 . + CDS 53745 - 54239 767 ## cauri_0217 hypothetical protein + Term 54264 - 54304 9.0 50 26 Op 2 . + CDS 54329 - 55231 574 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 55249 - 55288 5.0 + Prom 55339 - 55398 2.8 51 27 Op 1 21/0.000 + CDS 55453 - 57048 2550 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 57086 - 57120 0.4 + Prom 57125 - 57184 3.0 52 27 Op 2 49/0.000 + CDS 57258 - 58184 1371 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 53 27 Op 3 13/0.000 + CDS 58177 - 59136 1174 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 54 27 Op 4 . + CDS 59136 - 60860 190 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 60879 - 60917 5.9 Predicted protein(s) >gi|227860850|gb|ACLH01000070.1| GENE 1 3 - 1424 536 473 aa, chain + ## HITS:1 COG:BS_yeeA KEGG:ns NR:ns ## COG: BS_yeeA COG1002 # Protein_GI_number: 16077744 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Bacillus subtilis # 3 455 425 876 879 375 42.0 1e-103 SIPLIPLKETGQIHAGNATRIDWNEVCPNNGTDEIYLIGNPPYKGGKSQPAELKADYPYV FGERKYSKDLDYIALWFVKGADYISGTDAELAFVSTNSVVQGEHVGLMFPYFTTAGVEIG FGHSSFKWANNARQNAGVTVIVLGMRRVQKKSKFLFTDGIRKQVSNLNGYLSDAPDVFVR RRTTPITTWLPRMTLGSMPKDGGHLILEADERQKLLANDHASRRWIKRYTGAADFINDTE RFCFWIPDSDVEQARLNKLIAQHLDAVSNWRLKSSAQSTRDYAQFPNRFKQMAYKNTDSI IVPRVSAERRQYIPIGYLGPETVIADSANAVYDAKPWLFGLLTSKMHIAWAGAVGGKLKT DYRYGAYLVYNNFPVPELSDPQKQRLTELALRVLDVREYHCDKTLAQLYDPDLMPENLRQ AHHEIDMYVDSLYSKRAYETDEERLSDLFAMYEDMVAAEEAAKPKKKTRKQKK >gi|227860850|gb|ACLH01000070.1| GENE 2 1434 - 3434 1897 666 aa, chain + ## HITS:1 COG:no KEGG:cauri_0262 NR:ns ## KEGG: cauri_0262 # Name: not_defined # Def: putative ATP-dependent helicase # Organism: C.aurimucosum # Pathway: not_defined # 1 666 1 666 666 1269 100.0 0 MGKHSRDNLVNVEYAQAGTSVSTDALGMREMQRRVYEKRDSEYLLIKAPPASGKSRALMF VGLDKLFNQGRKKVIVAVPERSIGGSFKNTELKKFGFFADWEVKEENNLCSPGSAKSKVD EFIRFLKGKDAILVCTHATLRFAFEKLSPEDFNGTVLAIDEFHHVSADLENSRLGKLLRE IMNGSDAHIVAMTGSYFRGDAVPVLLPGDEAKFTPVTFNYYDQLNGYKYLKSLGIGHHFY QGRYTDTVHEVLDLDKKTIVHIPSVNSGESTKDKIEEVGLILDVIGEHVGVEEDTGIILM RRRDNGEILRVADLVDDTDQKARARTLLYLTETASVDRDAVDIIIALGMAKEGFDWPFAE HALTVGYRASLTEIIQIIGRVTRDSEGKTHAQFTNLLAEPDAAQSEVTVSVNNMLKAITA SLLMEQVLAQNFDFKAKAGPDDTSEPGTLKIKGLKEPSTDRVRQIIDTDLNDLKAKILQD DTFARAAIGSVDAETTNQVLIPKIIREQYPELTPAEVEEVRQRVVVDSVIKTGEVREVGD KRFINLANQFVNIEELNINLIDKINPFQRAFEILSKSVTPTVLQLIADSIYANKLDMSLE EALSLHPQIQAWVKANGRKPQHRTEDAEERKLADALLVLQKAAGERKSALAAEENTGSAT SEGNDA >gi|227860850|gb|ACLH01000070.1| GENE 3 3431 - 4621 780 396 aa, chain + ## HITS:1 COG:no KEGG:cauri_0261 NR:ns ## KEGG: cauri_0261 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 396 1 396 396 751 100.0 0 MSKNIENESVDPSVLAQLDALIAADTDGLLDLPEKPKPVTDVDRLTKAFREVSEFYAEHG REPDPDTMNISERKLGARLVGIRASTEKTEALKDVDEHGLLTAVEAPSTLEELLESDVLG VISDIPDIYDTSTLPTRKSPSDDGQRAMRVKSSDFDAFSEHFQAKHAGLADGTWGLSKFA GEQTIREGRFFVINGVMCFVAEVREPKVELGEDKPRLRVIFENGTESSMYRESLANRLYE TGGQALTRSSMEATEIGDADEETGYIYVLRSLSDNPDIASLDNLYKIGFSRGPVEQRIRG AEKSPTYLMAPVEIVASYRAYNLRPSALEHLLHRVFASVRLNASVMNDLGSSVAAAEWFL VPLEVIDEAIQLIMSGDIVDYVYSPATGRLVERTDS >gi|227860850|gb|ACLH01000070.1| GENE 4 4849 - 5220 642 123 aa, chain - ## HITS:1 COG:no KEGG:cauri_0260 NR:ns ## KEGG: cauri_0260 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 123 1 123 123 210 100.0 1e-53 MSDLNPAVADHHSETYPEFSGKIQDSYIEGYDPVSYGAPHSSLLRTSTWVGMGLVLSMLP AAGILIWGLGTWLYPDGTAGADYQINIIVGAIALVVVAILAVGSVKYGRRYYRQYRKETG RIN >gi|227860850|gb|ACLH01000070.1| GENE 5 5268 - 6017 967 249 aa, chain - ## HITS:1 COG:Cgl0368 KEGG:ns NR:ns ## COG: Cgl0368 COG0479 # Protein_GI_number: 19551618 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Corynebacterium glutamicum # 1 249 1 249 249 443 84.0 1e-124 MKLTLEIWRQAGPTQEGKFETVQVDDAAEQMSILELLDHVNDRLIEEGTEPYAFASDCRE GICGTCGLLVNGRPHGPGQNTPACQQRLFQFKDGDTIKLEPFRSAAYPVIKDMIVDRAKL DHVMEQGGYVSMDAGTAPDADTLHVNHETSEYALDHAACIGCGACVASCPNGAAHLFTGA KLVHLSLMPLGKEERGRRARNMVDDLEQNFGHCSLYGECADVCPAGVPLTAVSAVTRERA RAAFRGKDD >gi|227860850|gb|ACLH01000070.1| GENE 6 6017 - 8038 2835 673 aa, chain - ## HITS:1 COG:Cgl0367 KEGG:ns NR:ns ## COG: Cgl0367 COG1053 # Protein_GI_number: 19551617 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Corynebacterium glutamicum # 5 673 2 673 673 1051 77.0 0 MTNANTELKREHPNFSHPQSIVPGVKPGRILESHEPHGVPMKDMWSYQKDHMELVSPLNR RKFEIIVVGTGLAAGSAAAALGELGYKVKVFTYHDSPRRAHSIAAQGGVNSSRHKKVDND SAYRHTKDTVKGGDYRCRESDCWRLAYESIRVIDHMNAIGAPFAREYGGTLATRSFGGVQ VSRTYYTRGQTGQQLQLSTTSALYRQIGLGNVELFAHHDLQDIITYTDGGKKRAGGIVTR NLITGELKAFTGHAVILGTGGYGNVYHMSTLAKNSNAGAMMRAYENGAYLASPAFIQFHP TGLPVNSEWQSKTILMSESLRNDGRIWSPIKEGDDRPANEIPEEERDYFLERRYPAFGNL VPRDVASRAISQQINKGLGVGPLHNSVYLDFRDAIERLGKDKIRERYSNLIEMYEEAIGE SAYETPMRIAPTCHFTMGGLWTDFNEMTTIDGLFAAGECSWTYHGANRLGANSLLSASVD GWFTLPFTIPNYLAHHLGEAKLAEDSAEANETVARAQARIDRLMSVQGQNPHGPAYYHRQ LGDILYWGCGVSRNVEDLKVAIEKVRELRKDFWANVRITGDANDMNQVLEYGLRVADYID LGELMCIDALDRDESCGAHFREDHLSEDGEAERDDENWCFVSAWEPGAAEGEFIRHAEPL YFDSIPLMTRNYK >gi|227860850|gb|ACLH01000070.1| GENE 7 8054 - 8809 708 251 aa, chain - ## HITS:1 COG:no KEGG:cauri_0257 NR:ns ## KEGG: cauri_0257 # Name: sdhC # Def: succinate dehydrogenase subunit (EC:1.3.99.1) # Organism: C.aurimucosum # Pathway: Citrate cycle (TCA cycle) [PATH:car00020]; Oxidative phosphorylation [PATH:car00190]; Toluene degradation [PATH:car00623]; Butanoate metabolism [PATH:car00650]; Metabolic pathways [PATH:car01100]; Biosynthesis of secondary metabolites [PATH:car01110]; Microbial metabolism in diverse environments [PATH:car01120] # 1 251 1 251 251 470 100.0 1e-131 MSVKNPDREALAHGRITNETIRPKPGIPSWALKLTMAITGLFFALFVVGHMAGNLKLYLP AHDGQEALDAYGAFLRSMGEPLIPSGHLLWIIRIVLLACVIAHIYGAFALTARSKASRGK FKRTNLMGGMDSFATKTMLVTGVVLLLFIVFHILDLTMGVQPIAPEAFAHGEVKANMIAT FSRWPVTIIYIVAMLCLFLHLTHGIRLAASDLGITGAKWREVFVILAYVVPAVVCLANIV MPLSVALGWVS >gi|227860850|gb|ACLH01000070.1| GENE 8 9212 - 10618 1345 468 aa, chain + ## HITS:1 COG:Cgl0365_2 KEGG:ns NR:ns ## COG: Cgl0365_2 COG3800 # Protein_GI_number: 19551615 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Corynebacterium glutamicum # 138 468 1 331 331 444 62.0 1e-124 MSKTYVGSRLRQLRRERDLSQASLAATLGLSASYVNQIEHDVRPLTVPVLLKITEAFGVD ATFFSRDDDSRLLAEIQDVVQDQEICPSPVELQELSELVYNHPTVARTLVDIHRRYRNIR DKLSLATDTRRSDGSQALSMPHDEVRDFFYARQNYLDELDIHAEGIAAELGVTPFHIRDI EQSLNDRLTSQHGVEILTTDRMDGTLHRFDKDSGTLRLASRLSVGQRAFRMAAELGFLEA GGLISDLVDEEPFTSDASINLAKRGIANYYAAATLLPYNLIHSEAEQSGYDVEYLCNVFG VGYETIASRLSTLQRPNRRGIPFTFVRVDRAGNMSKRQSATGVHFSNSGGTCPLWNVYES FSRPNTISRQLAQMPDGRNYLWVSRTVSYPQGRFGDTNKLFSIGLGCEARHANRTVYAQG LNLDALSSATPIGAGCRTCPRQNCAQRAFPAINEQLVIDAHRSAVAPY >gi|227860850|gb|ACLH01000070.1| GENE 9 10925 - 11023 96 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSFANNFLGQIQGLLVTVVNAPFVLSSKLFG >gi|227860850|gb|ACLH01000070.1| GENE 10 11121 - 12533 987 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 470 4 458 458 384 43 1e-106 MTNEHFDVVVLGAGPGGYVSAIRAAQLGKKVAVIEKQYWGGVCLNVGCIPSKALLKNAEV AHTFNHEAKAFGISGDVSFDFGVAHKRSRKVSEGIVKGVHYLMKKNKITEINGLGSFKDA KTIEITEGDDKGKTVTFDNCIIATGSVVRSLPGVEIGGNIVSFEEQILNDDAPDSMVIVG AGAIGMEFAYVLANYGVDVTIVEFMDRVLPNEDKDVSKAIAKEYKKLGVKLLTGYKTTAI KDNGDNVTVEVESKDGSKTDTLTVDRCMVSIGFAPRTEGYGLENTGVELTERGAIAIDDY MRTNVEGIYAIGDVTAKLQLAHVAEAQGVVAAEVIAGAETQLLGDYMNMPRATFCNPQVA SFGYTEEQAREKFADRDIKVATFPFSANGKAAGLNETAGFVKLIADGEFGELIGGHMVGS NVSELLPELTLAQRFDLTAEEIGRNVHTHPTLSEAMKEAAEGIGGHMINL >gi|227860850|gb|ACLH01000070.1| GENE 11 12718 - 12828 146 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFFDTILVSINQVLGQIAHFGSSTSSKAALDWGLF >gi|227860850|gb|ACLH01000070.1| GENE 12 13192 - 14631 1773 479 aa, chain + ## HITS:1 COG:Cgl0342 KEGG:ns NR:ns ## COG: Cgl0342 COG0627 # Protein_GI_number: 19551592 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 1 422 1 363 365 283 42.0 5e-76 MKIARSLTTLAAASALALGAVVSPIASASDIDPAQIRGEATPSDISDIDLYTELEEYLPK DGAGNPTPSREQFEASFDKKVSYPDVKISNLPEEKKWMGYVFKYWDYRHKVKALNATAPA MDNREVPLAVITPDGNFDASRPTLYLLNGAGGAEQGMDWISSTIAKDLDPDTPDVQDLVH FYANRNVNVVIPQAGAFSYYTDWLSTPDRGYLKGPQKWETFLTKELPGPLEKRINGNGKR GIAGMSMSATSSLVLAQHNPNFYDAIGSYSGCAATSTPLPNFYAQLTVNRGGGSTEQMWG AKGGDYNRYNDGLINATKNNMGNSKVYVSANSGLAGATDLGSSKIESAGSSQAFKSSSTL VVEGGVIEAAMNACTHDLKAKMEREGVKDAVFNLRNTGTHSWPGWYDDINSSWPIFAQAF NLPKDPSAPEAATYAAEEGTSANEMNAEADTQDAKLDEAEANTEAPADSLPVDTEATGH >gi|227860850|gb|ACLH01000070.1| GENE 13 14670 - 15749 1402 359 aa, chain + ## HITS:1 COG:Cgl0342 KEGG:ns NR:ns ## COG: Cgl0342 COG0627 # Protein_GI_number: 19551592 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 1 357 4 361 365 346 52.0 5e-95 MKRLSSLLAAGALSAAALVSPVAGAATLTPQQVAGDTALSTISDLQVTPEVESQKWYGKY KDDPRVLKLEATSPAMNGRSIPLAVISAKNPDRPTVYLLNGAGSAEQDSDWLHMSDAVDF YAEKDVNVVVPQAGAFSYYTDWLEEPNGKYLKGPQKWETFLTKELPGPLEERLNANNKRA IAGMSMSATSSLLLAQHNQGFYDAVGSFAGCAATAYPTEYEFLRLTVNRGGGQPEQMWGP MGSAYNRYNDALMNSEKLRGTKLYISSASGFAGEQDTPSYYINKGYSPLTAYMGSAQLQV EGGVIEAAVNHCTHMLKAKLDKQNIPATYNFRNVGTHSWPGWREDLVKSWPTFEEAFNS >gi|227860850|gb|ACLH01000070.1| GENE 14 15834 - 17192 1620 452 aa, chain + ## HITS:1 COG:Cgl0338 KEGG:ns NR:ns ## COG: Cgl0338 COG0308 # Protein_GI_number: 19551588 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Corynebacterium glutamicum # 21 451 14 455 460 502 55.0 1e-142 MKLLSTALSHISSARGHAAPSRDSYTGVDFNIGFEVTHYDLDLAYRVEPNMLQGEAVLHI RALEDLDKLTLDLGGAMVARRITAKHAPRVAKFRLSGGKLRLNFADTIAEGQEFELLIRY GGSPRPLRTPWGEIGWEETDSGSLVASQPNGAPSWFPCDDTPSAKATYDIRITADDPFVV ISNGKLVSRRSAGGSMTRWHYRVKHPMATYLATVQVGEYIEIPLGANVRAWAPAHLKQVV LEEFSQQQEMVDFYSALFGHYPFADYQVVITDDELEIPLEAQGLSIFGSNHVKGDHVFER LIAHELSHQWFGNSVGLMEWKDIWLNEGFACYCEWLWFEHAHGRPAHESARSHYQVLARK KQDILLSDPGTRDMFDDRVYKRGALTVHALRRLVGDEAFFATVREYLTAAQHSVVSPEDL ISRMREAAENPGDVDQLLAQWLDKPELPRFPL >gi|227860850|gb|ACLH01000070.1| GENE 15 17252 - 18256 1013 334 aa, chain + ## HITS:1 COG:Cgl0333 KEGG:ns NR:ns ## COG: Cgl0333 COG1088 # Protein_GI_number: 19551583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Corynebacterium glutamicum # 1 334 1 339 339 483 69.0 1e-136 MRRLLVTGGAGFIGANFVRLVAQQRPEVEITVLDKLTYAGNRANLDGVDAELVVGDVADE GVVDKLVSQADTVVHFAAESHNDNSLRDPSPFLHTNIMGTFVLLEACRRHDVRLHHVSTD EVFGDLEIGADTYFTEETPYNPSSPYSATKAGSDHLVRAWVRSFGLRATISNCSNNYGPY QHIEKFIPRQITNLLLGQPAKLYGTGEQVRDWIHVDDHNEAVLAILDRGRLGETYNIGAD QEDTNNRQVIEMICELMGATDNGQARFEHVADRPGHDQRYAMDASKLRRELGWAPRYTDL REGLAATIEWYRAHEEWWRAGKEEVEANYAKQGQ >gi|227860850|gb|ACLH01000070.1| GENE 16 18263 - 19627 1504 454 aa, chain + ## HITS:1 COG:Cgl0332_1 KEGG:ns NR:ns ## COG: Cgl0332_1 COG1898 # Protein_GI_number: 19551582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Corynebacterium glutamicum # 4 175 10 182 182 253 67.0 4e-67 MKVQSTAIEGLLIVELDVHGDNRGWFKENWQREKMVAAGLPDFQPVQNNVSFNAEKGVTR GLHAEPWDKLVSVASGRAFGAWCDLREGSATFGQLVTHELREDVAVFVPRGVANGFQALE ACAYSYLVNDHWSPDAEYTCVNLGMVDWPLEPTEISDKDKEHPALADVSPMPPHRILVTG ANGQLGRALKKFLPSAGLGAVEFCGHEDFDITNPPARPWKQYSAIINCAAYNDVNGAEDN RAAAWAVNASAPAKLARIAAENNLTLVHVSSDYIFDGTEEVHSEDELPSPLSAYGASKAA GDTAAQTAPRHYVIRTSWVFGDGANFMATMRSLANKGVKPSVIHDQRGRPTFAEDLAKGI IHLLKTEAEYGVYNISNSGDVVGRDEIAMAVFTGVGQDPADVTPVSTEQYREIAGPEAPR PKESTFDLSKIEATGFKPMNWRAALALYLALYPA >gi|227860850|gb|ACLH01000070.1| GENE 17 19716 - 21149 988 477 aa, chain + ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 1 405 1 418 563 207 32.0 5e-53 MTPTTLSELIAQLRVIGSDKQSVEVKSSVSKEVLSTLSAFANGDGGTLIIGLSEQDGFTP VKKFSASTAQDQLETRCQQLIPPVRPRIDIIEFESSNILVAEIDELPARDKPCYVAERGL YKGSYIRTGDGDTRLSQYEVNRLVEEHTQPTWDEDAIPDATLEDIEGAALDGFLQVQKER RPKTFANGQDTALKRLRILKDGHPTLASLLVMGDYPQEFFPRLTVTFALFPGTSKGDVTT GIRLLDSATLHGTIPELVSEGIDIVKKNMRTAGFIGDKSRTALPDYPLVAVREALVNALM HRDYSPTARGSQVQINMFVDRLEITNPGGLYGGVTLRNLGEAGVSSTRNQRLATFLEDIP LPEGGVAAENRGTGIATIHQALADALMPKPEIINRLDSFTIIFHRRRVATQERYGTARDH VEHLLHGSPSVSTTELVEATKLSRTAVQKALNELIRDNIAEKTEPGRSPKQRYRLRK >gi|227860850|gb|ACLH01000070.1| GENE 18 21274 - 22140 976 288 aa, chain + ## HITS:1 COG:Cgl0331 KEGG:ns NR:ns ## COG: Cgl0331 COG1209 # Protein_GI_number: 19551581 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 1 284 1 284 285 437 76.0 1e-122 MKGIILAGGSGTRLYPITKGISKQLMPIYDKPMVYYPLTTLIQAGIREILIITTPEDQAA FQRLLGDGSQLGLMLHYAVQPRPEGLAQAFLIAEDFISEDDVALVLGDNIFDGHGFSTAL NECSHPGGGIIFAYEVSDPQRYGVVDFDDSGQALSIEEKPTAPKSNHAVVGLYFYDNSVV EIAKSITPSARGELEITAVNEEYLRRGQLRVKRMQRGDVWLDTGTVDSMSEASAYVEVMQ KRTGTVIGSPEVAAFEEGFIDAAALTELAKPLLKSGYGRYLLAAAQES >gi|227860850|gb|ACLH01000070.1| GENE 19 22313 - 23182 1090 289 aa, chain + ## HITS:1 COG:Cgl0018 KEGG:ns NR:ns ## COG: Cgl0018 COG1651 # Protein_GI_number: 19551268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Corynebacterium glutamicum # 102 284 72 251 254 90 33.0 4e-18 MPSSSSRPTSDPKKSALSAISPVAWGLLVIVVILAIIIGFLLAERNSSGKESTPAAQETA TSTAPTEDLAKDADKATPGTKFSDGKGDPMMFGPGGDTKSGDITVVHRKKENDPFAVGAV DAPVVISEFSDFECPFCSRHANVTEPDLLKKYVEKGLVRIEWNDFPVNGPAAVEAAKAGR AAAAQGKFQEFKHELYTASKDISGHPEFGIEDFMKFAEKAGVADLDKFRQQATDDTYTEV IEKATSYASQIGITGTPAFVVGDQFVGGAQPPEVFEQIIQEQLGKAANA >gi|227860850|gb|ACLH01000070.1| GENE 20 23175 - 23267 60 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPKPPLIVWVFIALVILTAFLGGYAVGVSL >gi|227860850|gb|ACLH01000070.1| GENE 21 23264 - 24058 759 264 aa, chain + ## HITS:1 COG:Cgl0017 KEGG:ns NR:ns ## COG: Cgl0017 COG0785 # Protein_GI_number: 19551267 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis protein # Organism: Corynebacterium glutamicum # 1 240 1 252 290 132 38.0 6e-31 MSIGIFGAAIAGVLTLISPCSALLVPAFFAYAFESQRQLLLKTLVFFLGLCTTLVPIGMG LAAILAQYRGQVITVAGWIIIALGIFTALGGGFRIPGMDALSGKARGKVFLLGAVYGFAG FCAGPLLGAVLTTAAASGSALYGGIIMVAYAAGMAAPLFVLAALWERLNVGSWSWLRGRE VVLGPVRTNTLSIVSGAFFVLIGALFIASYGTATLPAVLSTDAQFAVQEKARAFSAGVAD AWVWFGLSLAATVAVGVKAARTPA >gi|227860850|gb|ACLH01000070.1| GENE 22 24109 - 24744 876 211 aa, chain - ## HITS:1 COG:Cgl0320 KEGG:ns NR:ns ## COG: Cgl0320 COG0491 # Protein_GI_number: 19551570 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 3 211 8 211 211 226 51.0 3e-59 MIIEQFVTSGKFRLDGGEWDVDNNVYILAAGGASSDAECYIIDPSHDAERVIEEVGQRTV KGVILTHAHNDHCELAPQVAEHFGVSVYLHPDDRPLWEETHEDATFVPLEDNQLFTVGDS DFVVFHTPGHSPGCVVLYIADEATLLSGDTLFNGGPGATGRKYSDFDVIIESLRNRVLNL PPETRVLPGHGDETTIGAEAARIDEYVARGY >gi|227860850|gb|ACLH01000070.1| GENE 23 24745 - 25896 1388 383 aa, chain - ## HITS:1 COG:Cgl0319 KEGG:ns NR:ns ## COG: Cgl0319 COG1062 # Protein_GI_number: 19551569 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Corynebacterium glutamicum # 16 383 2 368 368 559 78.0 1e-159 MAVNENLNENNSQKGSEVVRGVIARAKGEPVETVNIVVPAPGEHDVVVKIQACGVCHTDL AYRDGDIEDAFPFLLGHEAAGVVERVGDAVTHVEVGDFVVLNWRAVCGECRACKKGEPKY CFNTHNASAKMTLADGDKDAGTELTPALGIGSFAEKTLVHEGQCTKVNPEADPAAAGLLG CGVMAGLGAAVNTADVKRGESVAVFGCGGVGMAAIAGAVLAGASKVIAVDLDPDKLELAK KFGATHTVAAKDKSEDEVIEAVRELTDGFGTDVAIDAVGIPVTTRQAFYSRDLAGRMVMV GVPNLTSRFDIPAIDFFGRGGSLKSSWYGDCLPERDFPMYVDLSLQGRFPLQDFVTERIG LDDVEEAFATMKAGKVLRSVVEL >gi|227860850|gb|ACLH01000070.1| GENE 24 25963 - 26778 1040 271 aa, chain - ## HITS:1 COG:no KEGG:cauri_0241 NR:ns ## KEGG: cauri_0241 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 271 1 271 271 527 100.0 1e-148 MKSTQRIAALCASLLVAVGLSQAPQAVAGERNLVAFGDSVLADPQLDTYLSSRMGSSQRN PSLNCPSGNNYAKRTAAKLGMPVADFSCSGAVSMSQGPQVNAQIDDAIRRGALSADTQRV LFASGFNDTYNNAGLSDGDMRARWVGANAPLIHKIRAAAPNARIQIVGYPTIGSGDRYCL LHFGPKPADATALPMVQRYENVAQWMQVDLARATGTEFVDMKPMTWDRGMCADANKRLWA GLVDFSAGPGNLPLHINARGHEFVANHLASF >gi|227860850|gb|ACLH01000070.1| GENE 25 26948 - 28615 1957 555 aa, chain + ## HITS:1 COG:MT1470 KEGG:ns NR:ns ## COG: MT1470 COG0318 # Protein_GI_number: 15840884 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mycobacterium tuberculosis CDC1551 # 16 553 9 531 535 292 35.0 1e-78 MKLSDVTFHAAALARFIPSLFRAGLISPAGGPRAVALTAPVLARYRFTTAREVEQAYLTC PERLALIDDDGTLTYRQLREQSQTFARWLLSLGLEEIRLGVMARNGRDIITPLAAKGYAG AHIFLLNVGSSPEQLAGCIEENRINVLVIDDEFIDRLAPADSASPIDGLHVVIGHKSGEE IPAELAQAASLRKIVENPRDVEKQKLPTWPKHGHIVLMSSGTTGIPKGIMRPEPTLPVVV ASIVDAVPWRGDQKVQMTASIFHTWGWACLNIALGLRNTIVTRRVFDPAAALDDIQRYQL DGLLSSPVFFRQMVEVDPDSAYDTSSLKFIASAGHALTPEIVKETHERFGPILCNVYGST ELALASTASMEEVAKDPTIGGKIASGTKLRILDEEGNEVPRGEVGEIYLTNSTALIGYTN PKIPLNKVDGLISIGDLGYIDPEGYLHVVGRADDMIIVGGENVHPQSVTEVLEAMPGIAE VHAGGVEDETTFQRIAVWAVTTRDALGSTVTADSIRTWVRENLADHSVPRDVHFLDKLPR NATGKVVPRLLHSTD >gi|227860850|gb|ACLH01000070.1| GENE 26 28740 - 30884 2434 714 aa, chain - ## HITS:1 COG:YPO2628_1 KEGG:ns NR:ns ## COG: YPO2628_1 COG1263 # Protein_GI_number: 16122841 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Yersinia pestis # 3 432 1 405 410 405 51.0 1e-112 MKIDVMGPLQRLGKALMGAVAVLPVAAILSGLGYWISSAAGPDNLAAQLLISSGDAVLAN LGWIFAIAIAFGLAKDSNGAAALSGFLAFATFMKLLGPEAVAGYRGIEDPTALTGDEALQ WASEGWNAVGGGNVLFGILAGIMAAWVYNRFHGTKLPDFLAFFSGRRLVPILTAIIAMVI SGILYFVWPFIYNALFNFGTSIQGLGAAGAGIYGVANRLLIPTGLHHALNSVFWFDVIGI NDIGNFQAGQKTIEAAAAATSAADCPGIWANGQCTVEGVVGRYQAGFFPVMMFGLPGAAL AMYLRADKKKRKVVGSLMAAGALASFFTGVTEPLEFSFMFVAPLLYVVHALLMGLSVFIA STMEWTAGFGFSAGFVDMLLSSQNPLANKWYMLLVMGVGFFFLYFVIFYFLIGWLNLKTP GRGEDEAEDAEDSATGDDKTAADAARIIEGLGGKDNIDSLDYCTTRLRVGVKDRALVDDS LIKRAAVSGVIHPSEKSVQVIVGPAVQFMYDEVSHQLRHGSPALATTGAASAAGAAGASA SVPAGAGAASAQSISGDAADVDVRAPFAGDVVALSQVPDASFAQGMVGEGFAVMPDAVDA FDVCAPVDGTITMIFKTRHAFGMKTADGLDLLIHIGIDTVELKGEGFTALAKKGDTVTAG TPIIAVEAQKLRERGVNLITPVVCPTAKQVAGVDIAREGHAQPGDVAATVKRSS >gi|227860850|gb|ACLH01000070.1| GENE 27 30929 - 31693 757 254 aa, chain - ## HITS:1 COG:Cgl2592 KEGG:ns NR:ns ## COG: Cgl2592 COG0363 # Protein_GI_number: 19553842 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 1 253 1 252 253 269 55.0 4e-72 MEILIRSTPADVAVAAADILASYANTSATLGLATGSTPVATYKELIARHERGEVSFAGSR AFLLDEYLGLAPEHEQSYYATIRRDFTSHVDFDDALVKSPEGSAADPVAATAAYDQAIRN AGGIDVQLLGIGANGHIGFNEPSSSLTSRTRVVALHPQTVQDNSRFFDNLEEVPRHALTQ GLGTISEARHLLLIATGTNKANAVQAMVEGPLSARCPGSVLQLHPRATVIVDEAAAALLE DREYYLFADQNRLH >gi|227860850|gb|ACLH01000070.1| GENE 28 31725 - 32882 1040 385 aa, chain - ## HITS:1 COG:Cgl2593 KEGG:ns NR:ns ## COG: Cgl2593 COG1820 # Protein_GI_number: 19553843 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Corynebacterium glutamicum # 57 351 62 358 388 304 59.0 2e-82 MQTEAKGHVEGLYIDENFELRAGAVTFGENIEGIKLGDVPQAEAAWRAGDSDALLWVPGF VDLHNHGGNGGGFPNGDYEQCLAAARFHRAHGTTTLLASLVSGTQEELCTRTELLAQLAE EGEIAGIHMEGPFIAAAKCGAQDPSRIVPGDPDFFRAVIAAARGHLRSITFAPETDNADK LLEVCAEHGIIASLGHTEADYDTMLGVIAKAKELGLTVTGTHLFNGMPSIHHRAPGPVAA LLTAAKAGDVSVELIADGVHLVDGTVDMVHSHRAFAITDAMAAAGMADGDYELGSLPVTV SGGVARVPSGAIAGGTSTLAQQFASFAERHGLGEAVRFTSTTAADVLGEKDLGRIAVGAR ANLVGLNAQLEPVRVIVGGAEFIDS >gi|227860850|gb|ACLH01000070.1| GENE 29 33060 - 33938 568 292 aa, chain - ## HITS:1 COG:no KEGG:cauri_0236 NR:ns ## KEGG: cauri_0236 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 292 1 292 292 500 100.0 1e-140 MKKLVVGMIAVVAVIVVAFVGFVGFMKWVDADSVTGDDGVAAGYSAETGGPLEASFAGEG PHEVDVRRDGDVTIAAPTGAGPFPAVVMANGTNTPLSSYLPVAEHLASWGFVVVGDETPH TGTGENVVHLIERLPEMDSRVDRSRVGIFGHSQGGAGAINAAAHTEVAAVYAASPASHKV AQSNDWDYTTADVEAPLFLMTSDGRSDRWLVSPWSDLQESFESAGGPAIIARRLGADHKD VLEFGDGYATAWFRYILADDPDARDVFVGTSPAGAGELANNELWDRVATRGW >gi|227860850|gb|ACLH01000070.1| GENE 30 34132 - 34587 504 151 aa, chain + ## HITS:1 COG:no KEGG:cauri_0235 NR:ns ## KEGG: cauri_0235 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 151 1 151 151 310 100.0 2e-83 MAHFTARQLKRFMGFWPPFLGAGIKIQEFADDGTRVVVSHRPNMLTKNAMGVAFGGTLSA MTDPFFMLASMHRLGKEYRIWDVAGEIKYLKPGRGTVTADMRIPEETYALIEEKTANGEK YLHWFDVDILDEEGDVVAHVRRQVYYRRKQK >gi|227860850|gb|ACLH01000070.1| GENE 31 34836 - 35852 671 338 aa, chain - ## HITS:1 COG:no KEGG:cauri_0234 NR:ns ## KEGG: cauri_0234 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 338 1 338 338 640 100.0 0 MVPVDKGQEEVIERLLEKSKEAFALAVELYNRPTLKYHAETCSIFLCNAWELMLKAYLIR DRGIESIYYSDESGKTIALADCLKKIFTNDKDPLRINMAEIIRFRNVNTHFITDEYEIFI GPFLQKSVMNYADKLLDLHGESVSDLIPENHLTLAVRRGAIDPDVIRTKYEPHVAEKLLK MSQLAADAAGTGEGGAAAVIYETNLRIVKKAKDADLNVYVDKDAEAGVTIVKDIRDAASY YPYTVGNAVKEVRNRLRKSKTTIYFRGEEKLFNRWHFNLFNKVFQFREDARYAHDRSTAG EPNSSWTYSQRAIEFIVAQLEKEPGTCIDALQAKAKAK >gi|227860850|gb|ACLH01000070.1| GENE 32 36174 - 37382 1012 402 aa, chain - ## HITS:1 COG:Cgl0312 KEGG:ns NR:ns ## COG: Cgl0312 COG0470 # Protein_GI_number: 19551562 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Corynebacterium glutamicum # 3 398 8 410 414 338 51.0 1e-92 MNTSSVAERLADAPSVAHTIFSAARAARGEGDPRAMSHSWLFTGPPGAGRSLAAQCFAAA LMCTSADENGNPGCGRCPSCQSVLAKQAHTDLVYVDPQEQFITVGEAREVIGRAASLPSV APWRVVIFNKADRLRNEAANALLKTVEEPPERTVIIMVAPSEDPEDFSVTLRSRCRYLYI PAPSVEGVVKQLVAEGTSEDDARLAAVTTLRHVGRARHLVNEPAAQKRRAMAINLAEDVF HGSQAFQSVTALLKFIEKEAKDSHAAAEEAERSKIEQSFGVGAKGKGATKAQRDARSALK DLEDLHKKRAKRRIADGLDIALVDLAGIYRDALMLKVGADVEMTHPDFAGLAGELAQRVS EDGLLAAQSAIRTCREQLPQNVTPQVAFDGMVGRLRMACGAR >gi|227860850|gb|ACLH01000070.1| GENE 33 37420 - 38952 168 510 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020820|ref|YP_526647.1| ribosomal protein L19 [Saccharophagus degradans 2-40] # 304 485 200 382 460 69 26 5e-11 MNRLMRGARWLWGTQWPMYAALVLGSNIIGAIAIMTFVVFFLPMPEISDFIAHTPHLWTY GTLFVTFAVIIGIAVTLRLFRPVLDWQRSPDDHDPNMVRNLVLRIPLYQAGVAAGVWLLG IVLAVILAGQHSARLAIVVGVSATLAGGLIVLLTYLQAERLVRPVAAEAVARRFEDSTLE PPIKYRLLSTWLMTSGIPLIGIILVHLGQKMGMFTADTADIIPAIIALSITALGTGLIGT MFAMMSVVDPILELQDAINRVRRGENDVQVDIYDGSELGVLQAGFNEMMRGLRERQRVRD IFGRYVGTEVAQRALEERPELGGEDRKVAVLFIDVIGSTTFAVNHTPEEVVEELNKFFEH VVEVVHRNKGIINKFQGDAALAVFGAPLTVYDANSMALQAARELRQELRGLRLQAGIGVA AGHVVAGHIGGADRFEYTVIGDAVNEAARLTELAKDTPGQVLTNSATLRGANEAEQARWT LMKSIELRGRRRMTQLARPIRPTLAERALG >gi|227860850|gb|ACLH01000070.1| GENE 34 39067 - 40359 1194 430 aa, chain + ## HITS:1 COG:Cgl1866 KEGG:ns NR:ns ## COG: Cgl1866 COG2311 # Protein_GI_number: 19553116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 398 30 433 445 283 45.0 4e-76 MALLGIALANVCTAWIMNDGDGPDAYFGGVETVADKIYVVFAAMFIHVRGLPMFSTLLGF GVGLIAMSLWRRGFPLRRAQAVLAKRYGFLALFGVLHCLFLFSGDIMILYGAMGMLIALL LSFTDKLLMRVAYGLCALLVVSGIGMGIGAAFIDTSDFDFSGFSAAESYWELLGEQAIMV GAQLMSIPLTGAMVLPVMLVGFVWARRGTLAGGHRRELWAWTLLALAIILFLGLPWGLAT IGVLDPVLADPLNAANSCIGMLTGPGIVAAATLALEPLQRRGARPWFLWPLIALGKRSMT GYVLQSVFFLALVYPFTLNIGPELSAAGQAALAAGVWLATLLIACALEAAGKPGPFEWVH RRLSYGKTMRPELGAASSSEPSARAHPPAAPGLSSAPPTAPHPGLGHAGPHPGAAQPGSG PSAPQRPEAG >gi|227860850|gb|ACLH01000070.1| GENE 35 40196 - 40897 779 233 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227505641|ref|ZP_03935690.1| ## NR: gi|227505641|ref|ZP_03935690.1| hypothetical protein HMPREF0308_1911 [Corynebacterium striatum ATCC 6940] hypothetical protein HMPREF0308_1911 [Corynebacterium striatum ATCC 6940] # 79 229 3 149 150 93 49.0 9e-18 MKTSFARDMVARTQEGAEALLRAVGPAFAGRDHFTLGALAAGETAVWSRLFNWRTLGTVT TAAAPVLLALRPDCAPETRVGLIAASLGQAAKRGEPTTFGVTCVSVQYASFAWALRGARN DAVGWGLRAGAWAAGIALSRTRGERRATAIAGIPAAALSALAGDEKLRANQATQGLSHGA NLLLASEALTVLNPVEQRQDAGLRGRALDAAQSAAQTIGLVLLVDGLARKARS >gi|227860850|gb|ACLH01000070.1| GENE 36 40904 - 43864 3816 986 aa, chain - ## HITS:1 COG:Cgl0309_1 KEGG:ns NR:ns ## COG: Cgl0309_1 COG0550 # Protein_GI_number: 19551559 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Corynebacterium glutamicum # 23 602 13 608 608 846 77.0 0 MPSRGLAIGRDEVEVAEATGPGKTLVIVESATKAKKIQPYLGDKYIVEASVGHIRDLPRG AADVPAKYKKESWARLGVNPEDNFTPLYVISQDKKKKVADLKAKLKQCDQLYLATDPDRE GEAIAWHLLEVLKPKVPVRRMVFNEITKSAILEAAENTRELDENLIDAQETRRILDRLYG YEVSPVLWKKVMPRLSAGRVQSVATRVIVERERERMAFIPAEYWDLTATLKSTPDFDARL SALDGKRVAAGRDFDDRGQLKSDEVVVVKQAQAEQLASALEGSTMTVASVEHKPYSRKPS APFMTSTLQQEAGRRLHYTSERTMRIAQRLYENGHITYMRTDSTSLSKQGLDAAREAATS IFGAEFVADGPRTYDRKVKNSQEAHEAIRPAGERFATPGQLAGQLDAEEYKLYELIWKRT VASQMADAKGTSMKVTAAVSAGGHDADFSATGRTITFPGFLKAYEDVASKGSKEESRLPH LNEGDTLKTAAVTADGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVLS RGNALVPSWVAFAVVGLLENNFTELVDYDFTSSMEDELDAIAAGSENGTDWLNNFYFGNT EAGERKAASIARHGGLKSLVDINLEAIDARQVNSLRLYTDAEGRDVFVRVGRYGPYIERA VGTNEDGTVEYQRANLSETVTPDELNEALAEKLFATPQGGRELGQNPENGRTIVAKEGRF GPYVTEQVRDDEREKAEAEAEEIVKEERAAEDAQRAAEGKRAKNWETKTAAKQKEKRIAE YVEEKLKPGTASLFASMEPSSVTLEEALKLLNLPREVGVDPSDGEVITAQNGRYGPYLKK GKDSRSLAKEEQIFSITLDEARRIYAEPKRRGRAAAQPPIKQLGDNDVSGKPMTVKDGRF GPYVTDGTTNASLRRGDDPEQLTDARANELLSERRAKDAANGGAKKSTKKSTKKSTKKAT KKSSKKATKKPSPGTKNVVKAGSRRK >gi|227860850|gb|ACLH01000070.1| GENE 37 43988 - 44617 618 209 aa, chain + ## HITS:1 COG:Cgl0276 KEGG:ns NR:ns ## COG: Cgl0276 COG0586 # Protein_GI_number: 19551526 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Corynebacterium glutamicum # 1 203 1 199 206 152 40.0 4e-37 MIASITAWFEVIMATQWIYPLVGSLIFLDCFFPVLPSEVPLNMVGAWSGSQGFPHLPTMF FVAMVAAILGDNLCFLLGTRLIGLINRAQKGTKAYDALTWVKRNIRRSGGAAIIIARFIP SARLFMTILLGSMRYPWVLFFFFDTIGVLLWVAQALAIGYLGGVAFSGSPAIAMLISIIA AVIIGFGLQKGQNKLLEWWDTRRGYAESP >gi|227860850|gb|ACLH01000070.1| GENE 38 44614 - 44817 341 67 aa, chain - ## HITS:1 COG:MT3750.1 KEGG:ns NR:ns ## COG: MT3750.1 COG1278 # Protein_GI_number: 15843260 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium tuberculosis CDC1551 # 1 64 1 64 67 91 75.0 3e-19 MAYGTVKFFNAEKGYGFIEQEDGSGDIFVHYTEIQGTGFRTLEDNQRVSFEIGEDAKGQQ ATNVEVV >gi|227860850|gb|ACLH01000070.1| GENE 39 44867 - 47281 2266 804 aa, chain + ## HITS:1 COG:Cgl0307 KEGG:ns NR:ns ## COG: Cgl0307 COG1205 # Protein_GI_number: 19551557 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Corynebacterium glutamicum # 20 802 5 781 785 1058 70.0 0 MPRLDTYSRLVEASVSENPLGEELVEHLVERFPESELTHSTTLPAQPASYAEWPEWVLPK LRAALEEQGVAKLYAHQVAVAQAAWEGRDVVVSTGTSSGKSLGYRLPILSRLAQDPTACA LYITPTKALGSDQLRAVLELTQGIATLRDVHPAPYDGDTPTEARAGIRDQARFIFSNPDM IHSSLLGAHQRWARVLRHLKFIVIDEAHAYRGVFGANVALVLRRLLRLCEHYGSRPVVIA ASATMRDPARHAARLTGREFFPVTEDGAPTGARTVALWEPGFMEGIEGQNGAPVRRAATT EAAWMMAALVAQGARTLTFVRSRRAAETTALRAAEELSGRLGRPDFARRIAAYRAGYLAE DRRALEQALDDGSLLGVATTSALELGIDVGGLDAVVTAGFPGTVASFWQQAGRAGRRGQG SLVVLVARDEPMDTYLVHHPEALLGRPVEASVFNPANPYILGGHVYCAAVEKPLSDADVA AFRAESVVHDLAQQGLLRRRPQGWFAAPLPAGSSELTPETAHTAVSLRGGSGEEVMIVDS SDGRLLGTIDSARAVSQVHPGAVYLHRGESFVIEELHLGGAGGAAPAEPGVALAVPKTPD YTTQPKSTTDIRILSEADDLVNYAPGLWVASLEVEVTDKVTGYQVRLPDGSVGEDIPLDL PEQRLVTRAVAYTIDPLALAAMGVTAGRTPGTLHAAEHAAIGLLPLIATCDRWDIGGVST AQHADTGLPTVFVYDGHPGGAGFAEEGFRRFPEWIKATFEAVRSCPCESGCPSCVQSPKC GNGNNPLDKAGAIALLGALVTMTS >gi|227860850|gb|ACLH01000070.1| GENE 40 47278 - 47586 250 102 aa, chain - ## HITS:1 COG:no KEGG:cauri_0226 NR:ns ## KEGG: cauri_0226 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 102 13 114 114 108 99.0 7e-23 MGEEGYATVVTAGIIAAVSSLLLAVAAVASLVVARHEAQVAADLAAVAGAWEVAKGRDAC TKATEIAVLNGAELGSCDIDGRDVEVTARLRGRSAIARAGPV >gi|227860850|gb|ACLH01000070.1| GENE 41 47619 - 47942 274 107 aa, chain - ## HITS:1 COG:no KEGG:cauri_0225 NR:ns ## KEGG: cauri_0225 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 107 1 107 107 104 100.0 1e-21 MRALDDAGSVTIEAALTLSALVIVAAGIVGGIATLSAHLAAVDAAGAAARSAAIGVDFQR EGVTVNLSEGAGLMTAEAAVPAPLGTMRAQAVFPAEMAAGGSTGAQP >gi|227860850|gb|ACLH01000070.1| GENE 42 47942 - 48130 340 62 aa, chain - ## HITS:1 COG:no KEGG:cauri_0224 NR:ns ## KEGG: cauri_0224 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 62 1 62 62 73 100.0 4e-12 MQKKVNYQSLLANDDGMSTIEYAMGSLAAAALAAVLYAVVNGGEVTSAITSIITDALSNT PG >gi|227860850|gb|ACLH01000070.1| GENE 43 48210 - 48767 353 185 aa, chain - ## HITS:1 COG:Cgl0303 KEGG:ns NR:ns ## COG: Cgl0303 COG2064 # Protein_GI_number: 19551553 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Corynebacterium glutamicum # 10 184 7 188 191 106 40.0 2e-23 MVLTYISAALMAAALAVTASAPSGRIAQSGSRTPRPKTPRDGPAAEYGPLDAASDLELFA ACLEAGLSTRSAVLAVAEASPQWSEAAALIGVGVPMNTAWSALASQPHLEELVRLTQLSG ESGAAMATGCHRLVAQLRAEASAQATARAERAGVFIAAPLAVCFLPAFLVLGLIPVLISL GQQLF >gi|227860850|gb|ACLH01000070.1| GENE 44 48767 - 49369 216 200 aa, chain - ## HITS:1 COG:Cgl0302 KEGG:ns NR:ns ## COG: Cgl0302 COG4965 # Protein_GI_number: 19551552 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Corynebacterium glutamicum # 1 199 57 256 258 100 44.0 2e-21 MVAVGCIVACALWFANDLAAARRERRGAEALASYFGSIAAELRAGSTTASALRRGTDALP DFTPESLRTALSTAAGLAAQGGSPAVALTAPEVKRFAALLTLSGRHGVALANLIEQAQSQ LDTARRHAGETAASLQGPQATAVILACLPLAGILMGRAMGADSLGFLLGGGLGGVLLDVG VALVCAGFAWSRLILRKAAQ >gi|227860850|gb|ACLH01000070.1| GENE 45 49513 - 50649 627 378 aa, chain - ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 3 362 7 365 377 379 60.0 1e-105 MNLIDTMRTIVAAEPQLAHDAPALARRIRQEAGVISDVDVLDLLQRLRHDSVGLGLLEPV LSLPGLTDVVVNGPDSCFVDCGQGLQPRDIGFADDAEVRQLATRLAAVAGVRLDDAQPFA DGRLTRPDGTRIRLHALLAPPSASGTCISLRVLRQAQTSLEELIANGSIDSSLEHVLRAV VERRASFLVTGGTGSGKTTLLAALLGCVPVTERLLIIEDTPELSPNHPHVVTLVSRRANA EGRGEISMSLLLRQALRMRPDRIVVGEIRGAEVVELLAALNTGHDGGAGTVHANSVDEVP ARMEALAALGGLDRVALHSQLAAAVHVVLGMERTPQGRRLAHLGVLEGNPVTPQLVWTAE AGPLPGFAQLCSRLGVEP >gi|227860850|gb|ACLH01000070.1| GENE 46 50646 - 51566 602 306 aa, chain - ## HITS:1 COG:no KEGG:cauri_0220 NR:ns ## KEGG: cauri_0220 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 306 33 338 338 466 99.0 1e-130 MEDPRDFSRHLPKADAVLADALTARLVAGHPRVYFLALDPGPIDYEAALCCRAAAAFIVP AQSKELLGALAADATPETTVSTGLTLAVTGSAGGLGASTVAVALAREAGADLLVDASPYS GGLDLLTGIENKPGARWPDLAAGTGAVDAADLVRALPTTPDSIAVLSAARSASAEVVQMS SARRAAIMQAACLYPGTVVVDCPPWDIPDAADHVVVLTASEVRAAAACAQLVAELRARPQ ECSVVVRNRQWAGLDVSDIATVTHADPIAELPTIRGLTRTVETSGLPRQLPRALARAARQ MWEAVA >gi|227860850|gb|ACLH01000070.1| GENE 47 52058 - 52954 955 298 aa, chain + ## HITS:1 COG:Cgl0299 KEGG:ns NR:ns ## COG: Cgl0299 COG0560 # Protein_GI_number: 19551549 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Corynebacterium glutamicum # 39 297 19 277 280 315 62.0 9e-86 MFAHSRFFLLRGYDEQGNSHTNGRPSSMTGTPFPTDGTTRAAAFFDLDKTIIATSSAYAF GREFMHNGLITHAEALQLSLAKASYMLAGHSSEHMDTTRDQLAAMATGWSVQEVHDIAVE TMHTVVTPAIYAEARALIDAHRAAGHEVVIISASASVLVEPIAQELGIEHVVATELAEKD GRFTGEILFYCKGAAKAEALARIAQELNVDPDASFAYSDSATDIPMLEQVGHPVAVNPDR LLKKHALAHDWEIRTFKHPVPLFTAPSAREFGIGSAVVAGIAALVVGGVFFARQQLRD >gi|227860850|gb|ACLH01000070.1| GENE 48 52951 - 53697 706 248 aa, chain - ## HITS:1 COG:no KEGG:cauri_0218 NR:ns ## KEGG: cauri_0218 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 248 1 248 248 391 100.0 1e-107 MNFPEFMWCGPQSGYGVIVMGMPHSDPLTPLMSLSGVEDKAASAVAAIARVHRRPAGLRK FDVISSESLLRGARAAAAIDGAPLEADSIPPAVSAYSLLAPETQAATVRTFARAPLQVLA RIDVAAGGAGRPDQNPAVAQALAQLTTRGAGVDFDRLLPVVLHAEIAARSLFGARSTVVA LVAARTAAIHTGFDPRGFAVPETYLNRHRADYRAALDAYDKDPGALITLLLDAWEAGARE ADGIAQAA >gi|227860850|gb|ACLH01000070.1| GENE 49 53745 - 54239 767 164 aa, chain + ## HITS:1 COG:no KEGG:cauri_0217 NR:ns ## KEGG: cauri_0217 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 164 1 164 164 278 100.0 8e-74 MSNDGLFTDGSNKFAPKVDGIPLSDANTSRRGEASIGQLVSNATEQMSQLVRSEVELAKT ELAASAKKGGIGAGMFGVAGTVALYSSFFFFFFLAELLAVWLDRWAAFLIVFLIMVVLAA VVAFIGFKQVKQVKAPEKTIQSTKELKKLVPGKAEKSIERGLYT >gi|227860850|gb|ACLH01000070.1| GENE 50 54329 - 55231 574 300 aa, chain + ## HITS:1 COG:Cgl0297 KEGG:ns NR:ns ## COG: Cgl0297 COG0596 # Protein_GI_number: 19551547 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 6 298 40 328 331 232 45.0 7e-61 MNPLPPSVVELDGPFEHEFLHTRGIRLHAATAGDPDNPLVLLLHGSFGGWFDFRNVIAPL ADAGFHVAALDMRGFGMSDKPPLEPGQDIRVAVGDVSGAIRALGHDDAYLVGADTGGAVA WALATERPERVRGLVSVSAAHSADLRRAIAARPWDFGWVLLRAALCRLGKIGAPSLLLRE SAYLREMDLDALGSFSGAEREEALRLRVASSRIGNVRRGIIWNHRLRTAVVPLSWLELSV QCPTLFIHADQMLWRPVARRAARRCRGDFTATTIPGSKNLPYLENPHGFTQTIIQWLRDR >gi|227860850|gb|ACLH01000070.1| GENE 51 55453 - 57048 2550 531 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 40 530 44 533 534 641 66.0 0 MTLKKTLAALSVATLPLTLAACGGDNSGSDSASGSGDGIITVNGSEPQNPLIPANTNETG GGRIVDSIYAGLVYYDGDGEAQNELAESIEPNDDNTEFTVKLKESTFSDGSPVTAKNFVD AWNYAVANDQLNASFFANIKGFEEGVEEMEGLKVVDDLTFTIALNSPEQDFPAQLGYSAF YPLHESALEDMDAFGQNPIGNGPYKLTEWNHNQDATVVPNEEYKGGQTPQNDGIKFVFYA GQDAAYADLLAGNLDVLDAVPDSAFDVYEADLGDRAVNQPTAVFQSFTLGENLEHYSGEE GVLRRQAISYAINREEITDTIFKGTRTPAKDFTSPVMPGYSEDIKGNEVLKYDPEKAKEL WAEADKINKWDNPTLEIAYNSDGGHKSWVDATTNSIKNTLGIEAVGAPYPDFKSLRDEVT NRTIKTAFRTGWQADYPSQANFLAPLYKTNGSSNDGDYTNPEFDKLLDEALTSSSEEDAI KKYTEAQEILFKDLPAIPLWYSNATGGYSENVDNVVFSWKSQPVYYNITKK >gi|227860850|gb|ACLH01000070.1| GENE 52 57258 - 58184 1371 308 aa, chain + ## HITS:1 COG:Cgl1945 KEGG:ns NR:ns ## COG: Cgl1945 COG0601 # Protein_GI_number: 19553195 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 1 308 1 308 308 437 80.0 1e-122 MLRYIGRRVLQMIPVFFGATLLIYALVFLMPGDPVEALGGDRGLTEAARARIEAEYNLDK PFIIQYLLYIKGIFMLDFGTTFSGVPVTQVMANAFPVTVKLTVMAIIFESVFGILFGVFA GMRRGGFFDSTVLVISLLVIAVPSFVIGFVFQYLVGIKWGVLPVTVGANATVKSLLMPAM VLGALSLAYVIRLTRQSVAENLRADYVRTARAKGLSNGAVTRRHVLRNSLIPVATFIGAD IGALMTGAIVTEGIFGINGVGGTMYQAILRGEPTTIVSFTTVLVIIYIIANLLVDLLYAV LDPRIRYA >gi|227860850|gb|ACLH01000070.1| GENE 53 58177 - 59136 1174 319 aa, chain + ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 11 319 36 344 344 456 76.0 1e-128 MPNFEKTTPYPGQEHFVSETDETGLGAVDAVKDESAPSSQWGEAWRYLRRRPLFWVAAVM ILVAVLLAIAPGLFTNTDPRLCELSKSLAPAEPGHPFGFNRQGCDIYARVIYGARASVAV GILTTLLVVVLGSMIGAIAGFFGGWIDSVLSRITDIFFAIPLVLAAIVVMQMFKEHRTIV TVVLVLGLFGWVSIARITRGAVVSIKNEEFVQSARSIGASSWRILFSHILPNAAAPIISY ATVALGTYIVAEATLSFLGIGLPPTFVSWGGDISDAQASLRVAPAVLFYPAGALGLTVLS FIMMGDVVRDALDPKARKR >gi|227860850|gb|ACLH01000070.1| GENE 54 59136 - 60860 190 574 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 314 570 7 247 311 77 25 1e-13 MTKPLLEMKDVQISFTTSTGVVEAVRGVNMSIYPGQSVAIVGESGSGKSTTAMSILGLLP GTGKVTGGQILFEGEDITHYNNKQFESLRGDKIGLVPQDPMSNLNPVWRIGTQVEESLKA NNVVEGSERHQRVVELLEEAGLPDAERRAKQYPHEFSGGMRQRALIAIGLAARPKLLIAD EPTSALDVTVQKTILDHLELLTEELGNAVLFITHDLGLAAERAEHLIVMHRGRIVESGPS REILRSPQHPYTRRLVDAAPSLASSRIRAAKEAGVEAKELKSGEAIGAAAEPGSTAADSA EGSSSVAQAPVISVRNLTKEFDIRGQRGGKKLLKAVDDVSFDIRRGTTLALVGESGSGKS TVANMVLGLLEPTSGTIEFEGRDTSTLSKQELFKLRRKMQVVFQNPYGSLDPMYSIYKCI EEPMALHKVGSRKEREARVAELLDMVSMPRSAMRRYPNELSGGQRQRIAIARALALRPEV IVLDEAVSALDVLVQNQIIQLLAELQSELSLSYLFITHDLAVVRQTADDVVVMKKGQAVE QGTADDIFDNAQQEYTRNLINSVPGMHLEIGTGH Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:50:36 2011 Seq name: gi|227860849|gb|ACLH01000071.1| Corynebacterium aurimucosum ATCC 700975 contig00139, whole genome shotgun sequence Length of sequence - 10642 bp Number of predicted genes - 13, with homology - 12 Number of transcription units - 6, operones - 3 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 4/0.333 - CDS 121 - 1308 1134 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 2 1 Op 2 4/0.333 - CDS 1346 - 2023 398 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 3 1 Op 3 3/0.333 - CDS 2020 - 2589 554 ## COG0526 Thiol-disulfide isomerase and thioredoxins 4 1 Op 4 . - CDS 2599 - 3297 450 ## COG0177 Predicted EndoIII-related endonuclease - Prom 3394 - 3453 3.9 5 2 Op 1 . + CDS 3272 - 3385 129 ## + Prom 3392 - 3451 2.8 6 2 Op 2 . + CDS 3552 - 4235 1042 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 4283 - 4346 17.7 - Term 4283 - 4317 7.6 7 3 Op 1 4/0.333 - CDS 4335 - 5147 995 ## COG0491 Zn-dependent hydrolases, including glyoxylases 8 3 Op 2 . - CDS 5166 - 5624 432 ## COG0251 Putative translation initiation inhibitor, yjgF family 9 3 Op 3 . - CDS 5624 - 5785 329 ## Francci3_4281 hypothetical protein 10 3 Op 4 . - CDS 5799 - 6098 299 ## cauri_0202 WhiB transcriptional regulator - Prom 6217 - 6276 2.5 + Prom 6195 - 6254 1.6 11 4 Tu 1 . + CDS 6313 - 8757 2464 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 8853 - 8889 2.9 12 5 Tu 1 . - CDS 8878 - 9342 229 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 + Prom 9158 - 9217 1.8 13 6 Tu 1 . + CDS 9385 - 10290 1032 ## COG1408 Predicted phosphohydrolases + Term 10453 - 10483 3.0 + TRNA 10372 - 10448 88.5 # Pro CGG 0 0 Predicted protein(s) >gi|227860849|gb|ACLH01000071.1| GENE 1 121 - 1308 1134 395 aa, chain - ## HITS:1 COG:Cgl0296 KEGG:ns NR:ns ## COG: Cgl0296 COG0265 # Protein_GI_number: 19551546 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Corynebacterium glutamicum # 2 393 5 395 398 408 56.0 1e-114 MSLVVDVLIVIAVLLAVRVGWRQGALAAVLAAVGIIAGLVLGTVVAPLVMGLTDQAAVRF LLAVGVLILLVGLGQLVGTSLGMALRDRMRTRSGQRVDSSIGAVFQAAAAIVVIWLVSLP LASNLGGQPGQALRESRVLSSLNAVAPSRLAALPNGLAALLNESGLPPLVSPWQRSGADV EVDAPAVNIGDPKLAERVRPSVIHVLGDAEACSRRLMGSGFVTEPDYVITNAHVVAGTDK VRLDTVLGLKEADVVYYNSDVDIAVLHSPGLDLEPLSWAEQAAATGDDAIVLGFPQSGPF TAEPARVRDRLTIAGPDIYSTGRVERDAYTVRGSIRQGNSGGPMINPEGQVLGVVFGASV EDSDTGYALTADEVRGHVGDVTQLVDAIPTGSCVG >gi|227860849|gb|ACLH01000071.1| GENE 2 1346 - 2023 398 225 aa, chain - ## HITS:1 COG:Cgl0295 KEGG:ns NR:ns ## COG: Cgl0295 COG0494 # Protein_GI_number: 19551545 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 2 224 16 246 247 207 48.0 1e-53 MSRLFPAHAPEWLRPALGVDTSKVQERLIRHLPAARRRRESAVLVLLKGMRFEDGEVLLT HRSPSMRSHSGQIAFPGGRKDEEDASLVDAALREAEEETGLDRSTVTPLEQWGKLDIPAT GNTVSPVLAYWHKPGTVWPASPAETDDVFTVPLRELADPANRLMVGFSRWKGPAFRTRGY LVWGFTAGVLSGLMDHAGWSVDWDKNLVHDLRDSLDRSLNNEKIG >gi|227860849|gb|ACLH01000071.1| GENE 3 2020 - 2589 554 189 aa, chain - ## HITS:1 COG:Cgl0294 KEGG:ns NR:ns ## COG: Cgl0294 COG0526 # Protein_GI_number: 19551544 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 12 189 6 184 186 165 50.0 4e-41 MSQYSRWPGYVKASIVAIVALAALAFVGVVNLLEDDEPEVPVPEAQEQEVAKRPKCPEGP IAGVDLPCLGAAGTAAAKNVQIVTVWAWWCEPCRTELPFFEDLARSHSTWNVVGVHADAN AANGAALLNDLQVNIPSYQDDDGAFAGELGLPGVIPITLVVRDGIVEEKFIKPFTSAEEL EEAVEEVLQ >gi|227860849|gb|ACLH01000071.1| GENE 4 2599 - 3297 450 232 aa, chain - ## HITS:1 COG:Cgl0293 KEGG:ns NR:ns ## COG: Cgl0293 COG0177 # Protein_GI_number: 19551543 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Corynebacterium glutamicum # 38 232 38 232 260 238 60.0 8e-63 MLPILTTVTRVTSMSPDLSAPHDDATEAARIVHIRTALAEEYPDADCELDFTSPLELLVA TVLSAQCTDARVNQVTPELFAAYPSAPDYAAADRADLERILRPLGFQRAKAGHLLGIGEK LVADFDGQVPQGIDELTSLPGVGRKTALVVRGNAFGLPGITVDTHVTRLSQRLGLTGAKT PRAIERDVAKRVPEEEQTVFSHRLILHGRRVCTARKPKCAACVLAPWCPSRG >gi|227860849|gb|ACLH01000071.1| GENE 5 3272 - 3385 129 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVVRMGSMISLVLFVPLCLALFAILMEKLEATAFED >gi|227860849|gb|ACLH01000071.1| GENE 6 3552 - 4235 1042 227 aa, chain + ## HITS:1 COG:Cgl0291 KEGG:ns NR:ns ## COG: Cgl0291 COG0664 # Protein_GI_number: 19551541 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Corynebacterium glutamicum # 1 227 1 227 227 392 92.0 1e-109 MEGVQDILSRAGIFQGVDPVAVQNLIEQMETVRFPRGTTIFEEGEPGDRLYIITSGKIKL ARHAPDGRENLLTVMGPSDMFGELSIFDPGPRTSSAVCVTEVTAATMNSEMLKQWVADHP AIAQQLLRVLARRLRRTNANLADLIFTDVPGRVAKTLLQLANRFGVQEGGALRVNHDLTQ EEIAQLVGASRETVNKALATFAHRGWIRLEGKSVLIVDTEHLARRAR >gi|227860849|gb|ACLH01000071.1| GENE 7 4335 - 5147 995 270 aa, chain - ## HITS:1 COG:Cgl0290 KEGG:ns NR:ns ## COG: Cgl0290 COG0491 # Protein_GI_number: 19551540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 1 269 7 275 281 375 67.0 1e-104 MEHPAYSQLRPVSQSVGVVLCDNPSYTALEGTNTWIIRAGEDSRAIVVDPGPEDEGHLNV VTAKAGEVALILLTHRHDDHASGAQRLRQLTGAPIRSFDPNYCNGGDALVDGEVITVDGI TPQLEVVHTPGHTADSTCFFVWSAEAKNSTLEGILTGDTIAGRHTVLLSETDGDLGAYLK TLDLLEERGKDVALFPGHGPDLEDTSAVARKYIDRRHHRLDQIKEVRGRLGEDVDVKTLV DEMYDDVDPVLRHAAEQSTRTALKYLAAQN >gi|227860849|gb|ACLH01000071.1| GENE 8 5166 - 5624 432 152 aa, chain - ## HITS:1 COG:ML2304 KEGG:ns NR:ns ## COG: ML2304 COG0251 # Protein_GI_number: 15828236 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Mycobacterium leprae # 1 151 24 174 174 161 63.0 4e-40 MGALARLEELGVELPSVAVPLASYIPATQVGNQVWTSGQLPVVGGELPAAGKVGAEVSLD KAQELARTAALNALAAIDGLVGLDRITRVIKVVGFVASDPSFTDQAAVINGASDFLGEVF GDAGIHARSAVGVAVLPKDSPVEIEIIVEIAE >gi|227860849|gb|ACLH01000071.1| GENE 9 5624 - 5785 329 53 aa, chain - ## HITS:1 COG:no KEGG:Francci3_4281 NR:ns ## KEGG: Francci3_4281 # Name: not_defined # Def: hypothetical protein # Organism: Frankia_CcI3 # Pathway: not_defined # 2 53 28 79 79 89 78.0 6e-17 MTKWEYATAPVLTHATKQILDSWGEDGWELVTITPGMNPENVVAYFKRPLEES >gi|227860849|gb|ACLH01000071.1| GENE 10 5799 - 6098 299 99 aa, chain - ## HITS:1 COG:no KEGG:cauri_0202 NR:ns ## KEGG: cauri_0202 # Name: whiB4 # Def: WhiB transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 99 1 99 99 198 100.0 6e-50 MLKNASLTTERGEWVTQAKCRNGDPDALFVRGAEQRKAAVICRHCPVLNECRADALDNRV EFGVWGGLTERQRRALLRKNPHITSWAHYLAEGGELIGI >gi|227860849|gb|ACLH01000071.1| GENE 11 6313 - 8757 2464 814 aa, chain + ## HITS:1 COG:Cgl0279 KEGG:ns NR:ns ## COG: Cgl0279 COG0744 # Protein_GI_number: 19551529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 1 784 1 780 795 863 60.0 0 MTVIKSLGKLVLSTALVGILIALAIAPVAGVSGVAVARTNDTMQSDIQDLTNGEAPGVST ILDAKGNTLAYIYEQRRHPVQPDEISDAMKQAVVAIEDRRFYEHEGVDLQGNLRALWTNL AAGGVSQGASTLDQQYVKNYLLLVNATTDEERQAATEQSVARKLREMRMATDIDAKLSKD EILANYLNLVPFGNHAYGVEAAARTYFGTSAENLTVPQAAMLAGMVQSSEYLNPYTNEEG VIERRNMVLQAMADTGSLSQEDADSFAQEPLGVLDSPATLANGCIGAGDRGFFCDYVLEY LNEKGIDREHLTRGGLTVKTTLDPEVQDQALNAVRSHTAPDAEGVAEVMNVVQPGTSTRK VLAMVSSRTYGLDLDNNETLLPQPNSLVGNGAGSVFKLFTAAAALEAGYGIKDKLAVPKR YEAEGLGYGGAANCPPNKYCVENSGNYAPTMTMQDTLAYSPNTPFIQLTEQLGVERQVDI AVKLGLRSYEEPGSYDGETSIADHIKESNLGSFTLGPTAVNALELSNVGATVASQGMWCE PNPIEEVTDSHGNEVYLKHTPCERAVGKEVAKALENNMTADTEKGTAADSARAAGFSGQA AAKTGTTESNQSSAFLGFNSAIAAAPYIYNDGTTTSPLCTGPVRQCASGNLFGGKEPAAT FYTMAARVPAAQKGTVPDYDRAYDSGTVSPLIDGLKGKPESQARSALEKAGFVVKTTEVP APGVGYGKVVRVITGASGAKKGSEVTLQLSDGSASDSSSANSDQAAWDSTYGAPPAPSGD GAGTGGGQPSQSEPLFSQEDVDRFTNDVRSFFGL >gi|227860849|gb|ACLH01000071.1| GENE 12 8878 - 9342 229 154 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 4 154 3 147 147 92 35 1e-18 MSELKETIRADLKTSMKAKDKARTSAIRSLLSAIQAEETTGSRHEITDEDILKVIAREIK KRRESAEVYAENGRPELAEEELADVPFFEAYQPEQLDDDSLNTLVAESIAEVEKDSGEPV TIKQMGNVMKVATAKAAGRADGKRLSTAVKAALN >gi|227860849|gb|ACLH01000071.1| GENE 13 9385 - 10290 1032 301 aa, chain + ## HITS:1 COG:Cgl0277 KEGG:ns NR:ns ## COG: Cgl0277 COG1408 # Protein_GI_number: 19551527 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Corynebacterium glutamicum # 8 299 13 300 302 470 74.0 1e-132 MKIYPVLGGLAAAGLGTAAWAHSELTKFELKEYTLPLLEPGTLREESEFRILHVSDLHMI PGQRAKIEWVSGLDALDPHLVINTGDNLSDERAVPEVLRALGPLLSRPGMFCFGTNDYWA PRIPNPFNYLIGKKNEPSYVNLPWKGMRAAFLEHGWHDANQARVEFKVGDVRLAAAGVDD PHHDLDDYSEIAGAPNEDADLSLALLHSPEPRVLEKFAADGYQLSLSGHTHGGQLCLPFK VAGSRSIVTNCGIDRVRAEGLHRFGEMYMHVSNGLGTSKFVPFRVFCRPSATLLRITEKD A Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:50:49 2011 Seq name: gi|227860848|gb|ACLH01000072.1| Corynebacterium aurimucosum ATCC 700975 contig00140, whole genome shotgun sequence Length of sequence - 15625 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 8, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 14 - 163 106 ## cauri_0171 putative transposase - Prom 338 - 397 1.9 + Prom 1163 - 1222 2.1 2 2 Tu 1 . + CDS 1371 - 1856 -3 ## cauri_0197 hypothetical protein + Term 1875 - 1918 -0.9 3 3 Tu 1 . - CDS 1981 - 3483 1507 ## cauri_0196 hypothetical protein - Prom 3643 - 3702 1.6 - Term 3530 - 3571 7.5 4 4 Op 1 . - CDS 3747 - 5198 1502 ## COG1511 Predicted membrane protein 5 4 Op 2 . - CDS 5328 - 6884 2578 ## COG0753 Catalase - Prom 6918 - 6977 4.2 + Prom 6900 - 6959 5.5 6 5 Tu 1 . + CDS 7058 - 7606 616 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 7703 - 7762 2.0 7 6 Tu 1 . + CDS 7884 - 9206 1905 ## COG3949 Uncharacterized membrane protein - Term 9285 - 9354 16.2 8 7 Op 1 . - CDS 9380 - 10231 496 ## cauri_0191 surface-anchored fimbrial subunit 9 7 Op 2 1/1.000 - CDS 10310 - 11233 660 ## COG3764 Sortase (surface protein transpeptidase) 10 7 Op 3 . - CDS 11220 - 12206 632 ## COG3764 Sortase (surface protein transpeptidase) - Prom 12228 - 12287 1.7 - Term 12255 - 12308 8.5 11 8 Op 1 . - CDS 12324 - 13979 2130 ## cauri_0188 surface-anchored fimbrial subunit 12 8 Op 2 . - CDS 14078 - 15625 1624 ## COG4932 Predicted outer membrane protein Predicted protein(s) >gi|227860848|gb|ACLH01000072.1| GENE 1 14 - 163 106 49 aa, chain - ## HITS:1 COG:no KEGG:cauri_0171 NR:ns ## KEGG: cauri_0171 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 3 49 357 403 403 91 93.0 9e-18 MGKAAYAAWTKEELTRRGRPDGRPATYDTHIDNEWNPSLGIRKGWAGRS >gi|227860848|gb|ACLH01000072.1| GENE 2 1371 - 1856 -3 161 aa, chain + ## HITS:1 COG:no KEGG:cauri_0197 NR:ns ## KEGG: cauri_0197 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 161 146 306 306 322 100.0 4e-87 MRETLNRLANHAHSLDQSMLVLMDQINEKSRIQRLPVMYAHILGRATEHKEMRRLIEPPM HIDSKLSSNIQFADWVCALVKRAVEYQLVEDSRYSWIPNASQLSAARGAFTYESKLHLCG RSISDLHHSEIIYAERPVIDFLNVSQENREKLERVRKATLR >gi|227860848|gb|ACLH01000072.1| GENE 3 1981 - 3483 1507 500 aa, chain - ## HITS:1 COG:no KEGG:cauri_0196 NR:ns ## KEGG: cauri_0196 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 475 1 475 500 786 100.0 0 MTDSRDIKPFAASRGPKITSVGAIIGTALVGGLLLGGIGVGTSLAVFDEPERSDFLMQPA QREVQADIMDPDDMLSPEEEERMLGDVSRIAAPDVVQGLHYMVFAKNKENVNDSVEAYLR DHHPELIGKDKFADGQVFVGVGLDPRQAFIFVGEDVADRMKLRKGDSHLEQSIEAIKPGV RDDNIPAGLFAGAAAAIDVDRAADTQYESAKNGRIGAAIGLGAAGLSVGGAGAGIAGGAR RSRQKKAQQAREDWDYVSQTYTDVAQRLREIDIRAHSLQSGLVDERLREDWEGLRDDFLA IDAQVGSLMSIPADAPDDQFRSHAEPIAHARELCERVETAEVNIEKLRRIEDADVDARRF ELYELGKDLAQAGYLAADIDSSLERHAKELEGAAVALSQEPNHPQFMERYLELLDRTALL SEHLQAQLQKRNEADERPERTRIYDSNFFAGSGYHGYVPFYVVSTWDSDATTARDSSSSS GGVNSGFSSGFSGSGGSSSF >gi|227860848|gb|ACLH01000072.1| GENE 4 3747 - 5198 1502 483 aa, chain - ## HITS:1 COG:Cgl0271 KEGG:ns NR:ns ## COG: Cgl0271 COG1511 # Protein_GI_number: 19551521 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 31 474 22 470 492 202 37.0 2e-51 MTSRLASPADANRKIGARALILTLVLILPLIIGAAVAAVSEWQPAETWSQEQAGAPSDGT IDPAELYDVARALSEANAQAGFLANGAQQLADGTGDLQDGAGELGGGVDKLAGGSQELYD GLVQLQSGTAQLGNGATELADGVGGAVDQVIGLGVVRGQILQAIDGTLKDLEGNNSAEAK NIRSQLGDLRSQVENFQFDQSIQDQLTQLKDGSRELSNQLSVSGYAYHDGVYQATEGAQQ LNAGIGELNAKVDEALKGVDKLVEGAEKVDGMAKQNQTKVQGAQRAMPTVAGPAEAGAEP AQLLSPIVAMLLAAIAVLGGGVIGALLTRVDRRILVLLGGAVLIGVVVGLLVALLATGVT AAAVAWAGLAAAGAGVASASMVFALVRWLGAGGWFLGSVLAVAQVGVVGWAWKAASTGTD LNAAMSALVHLFPMQWATSAITVAGNGGQSPQLWTALAILGVIAVAAFVLVGAPAGREGK EKA >gi|227860848|gb|ACLH01000072.1| GENE 5 5328 - 6884 2578 518 aa, chain - ## HITS:1 COG:Cgl0256 KEGG:ns NR:ns ## COG: Cgl0256 COG0753 # Protein_GI_number: 19551506 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Corynebacterium glutamicum # 5 518 2 515 516 761 71.0 0 MTNASNESAADKVLDKGQRAPGGPNTTRPSGQPIATENTSITAGENGPVVLNDIHLIEKL AHFNRERVPERTPHAKGHGAFGELHVTEDVSAYTKAKLFQKGTVTPMMGRFSTVAGEQGS PDTWRDVHGFALRFYTEDGNYDIVGNNTPVFFIRDGIKFPDFIHSQKRLGTNGLRDADMQ WDFWTRNPETTHQVTYLMGDRGTPKTTRHQNGYGSHTFQWVNESGDAFWVKYHFKTRQGV ENFTDAEATEIAGKNADYHREDLYNAIEEGNFPVWDVKVQIMPVAEAEEYRFNPFDLTKT WSKKDYPLVDVGYFVLNRNPRNFFAQIEQVALDPSNIVPGIGLSPDKMLQARVFAYSDQQ RYRIGPNYKQLPVNQPLNQVNTYEHEGPMQYLFNAPEDPVYSPNRHAKGGGYLDGDENLR FKEQETTTAPDLYVNPDPAGIDLVRAPYVHHAEDNDTVQATDLYENVYDDGAKERLADNI TNAMAGVSPETEERIYAYWDAVSPQLGKRVRELFAEKK >gi|227860848|gb|ACLH01000072.1| GENE 6 7058 - 7606 616 182 aa, chain + ## HITS:1 COG:Cgl0255 KEGG:ns NR:ns ## COG: Cgl0255 COG1595 # Protein_GI_number: 19551505 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Corynebacterium glutamicum # 3 178 2 175 193 241 81.0 4e-64 MKRHSERDDARVTDLALKAGRGDRAALTEFIKSTQDDVWRLLAHLGGPDIADDLTQETYL RVIGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSATEYEDAAALTTTPESSGT WSEWIDARALIDALPEDRREALILTQVLGYTYEEAAKIAGVRVGTIRSRVARARKDLIDQ RG >gi|227860848|gb|ACLH01000072.1| GENE 7 7884 - 9206 1905 440 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 8 367 8 365 400 327 51.0 3e-89 MWKRAAAISMAFIGVVVGAGFASGQEAIQYFVAFGNMGLWGVLLAAALMIITGVAILQLG SYFQADEHTAVYDKISGPIVSRVLDWGTLATLFSIGFVMFAGGGSTISQQFDGVPIWVGG AVMLVLVLLVGLLDVDKVSNVIGAITPFIIIFVVLATGYTIIVTDVDWSWANDYAINNVE SPLNNWWLAALNYTGLNVMCAVSMSIVIGGNILDNRAVGVGGLIGGFFYLLLLALLVVSL YMVAPDVHEQDLPVLSLINNVNPILGYFMTFIIYGMVFNTAIGMFYAMGKRLTRKKPKLF YPVYAGACVVGFILSFIGFKQLVSSVYPILGWIGLLMIAVMVITWITQRDKITSESDRRV RARTLVKRRLDPREHFTKKNERELRKLAAASNMETEEFVSTVADEIHEELEADDEIEYDR EDPDPSVTFVEHTKPEVPKD >gi|227860848|gb|ACLH01000072.1| GENE 8 9380 - 10231 496 283 aa, chain - ## HITS:1 COG:no KEGG:cauri_0191 NR:ns ## KEGG: cauri_0191 # Name: spaI # Def: surface-anchored fimbrial subunit # Organism: C.aurimucosum # Pathway: not_defined # 1 283 1 283 283 394 100.0 1e-108 MSIAAMRTHGLSSKMGAGLAACAVTGLLISGVSVAEARTVTGNTDGLSLESIDCAGAATL TIVKTPRGDYENKPLSALPEHLVSGFRFSVTRIEGVDITTREGQEKARELSVGEAKKLLS GDSVEIVTDARGRATATGLQEGLYLVHEEGPTKEVEGQWFSKDFLIVVPVGSASQESKEW QCDAVVISKDSPRETPPPPTTVTTTTTPPFPPATTPRITPPPSTVTPPATVPPTQPVPPN ENTPPSRLVNTGANVLGVVGVGAVLLLVGFWLTRRRSVQDDSN >gi|227860848|gb|ACLH01000072.1| GENE 9 10310 - 11233 660 307 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 37 297 1 257 279 162 33.0 9e-40 MTTSNLQSPSRSTARKRSNRSKGVAAIVMVLCALLGVGILLYPVVATQMNNWEQSKLARQ FSDDSSAVSPEQAAAALAEARAFDEAHTGVSLEDPWSSGAPTDSEAYQQYLKVLDDFPAM GQIAIPSINVNLPIYHGTSDTTLLKGVGHLFGTALPLGGEGRRTVLTAHSGIENSTFFDN LEDVQVGDAIFIRNIGETLKYEVRDTEVILPDQLDRLAPEEGKDLVTLVTCTPYGINTHR LLVTAERVDFDPAEAEQALGGDALVWQWWMKLAIGAALALILLMLLGAFRLARKRRRTVA ERGVHES >gi|227860848|gb|ACLH01000072.1| GENE 10 11220 - 12206 632 328 aa, chain - ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 59 306 8 251 251 167 38.0 3e-41 MAAPLLERPASPSENEQDDKKTWTFSGLALFACLTAFAGLIVGLYPTTASWFSAREQARL VDLYDSKLDNAKPLSASQLIELAHRYNDRLSAGAALDAFANVPRGTGDLDEDGMSYKDQL RIDGTDVMARIRIPEIDVDLPIYHGTSDEVLNKGAGHLEGTSLPVGGLGTHSVITAHRGL ADATMFTNLNKVGIGDRFTIEVAGQVLTYEIRETRVVHPENTRFLKADPNRDLVTLVTCT PLGINTHRILVTAERVTPTPQSDIDAARGASKVGFPWWAVALIGGFLLLAFLFWRAGYMV PAKTKKNESGNESDSGEEQLESNSDDNL >gi|227860848|gb|ACLH01000072.1| GENE 11 12324 - 13979 2130 551 aa, chain - ## HITS:1 COG:no KEGG:cauri_0188 NR:ns ## KEGG: cauri_0188 # Name: spaH # Def: surface-anchored fimbrial subunit # Organism: C.aurimucosum # Pathway: not_defined # 1 551 1 551 551 949 100.0 0 MRVKSTTIGRRLACALGASALIVTGAGFAAPTALGEEPTAESSQTAELGNIDFTKKGSLT IKKHLHQDGTSAVGDPATGVYEGKPAEGIDGVEFTIYKIKDIDLSKNEDWEKVNSYKIPA DPEADSNLVKVKTVTTEGGGVATLKDLDLAAYVVVETNAPADIIDRAAPFVVTLPYPDTK ANDDRLGKRSEDWLYDVNVFPKNGKTELSKTVKGQASYGLNIGSEVHFPVTATVPKIAGD RVFKYFQVVDPMDTRFDKKSLKVASVKLSGVDLTSDDYTVAIQDWMVTVSLTQQGLGKLK NAAGQELEVVFVGQLDNLGEGDNFGRILNMAYVYSDTVSNPGESTPPETPGTTPPTTPPS TPPTTTTPPGGTPLVKQFWGDLKIQKVDQGTQKPLKDAEFKIYPAKDPYPAGECSPEYDE NATAVKKNGVEGEDLVVKSDENGNVHFEGLFVSDDQNDPKSKEFRCYVLVETKAPSGFVT PTDGNQLFPVKVTIGQTAQGKYDSKVENVKRDTPELPLTGGKGVIMLMVLGGLLLVVAVG AGVVFIRRAEA >gi|227860848|gb|ACLH01000072.1| GENE 12 14078 - 15625 1624 515 aa, chain - ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 63 455 1125 1448 1661 102 31.0 1e-21 DSYKGRIEWEKVDAADDKNRLAGSEWKLTYKPSDPKGKAAEVIIKDCVEAPCAKDGDLDP APGKFSVNDLGEGEYSLEEHKAPEGYLAEENLKFTIVVDANHYSVTKDGDGKSQPMPYKV ENNAVRIPVGKIANTKDEATVTWNKVDSANTSKLLGGSEWKIQRKDDKGGWTDAYTVVDN ATDQLKDKQLKDEDSDEGKFKVTIPTGDYRLVETKAPQGYIISEELKQGKEFSLTRENLS TNLSLGNCVNDKVESDVTWTKVDAEDKAKVLAGSEWILTPLNSDNSLDEDNKIVIVDNGK NDADDRDGYLKVEKLGGGKYELKETKAPEGYIAADKTWTVEVNAETVGKVIELDPVENKP IKGAVSWTKVQADKTTLLAGSEWSLVQVDDKDQPIKGTELEVTDCEQADCAGPDADQTPG KFLVKDLKAGKYKLVESKAPAGYKLDATEHYFEIKDDGTSEEVVVAGSFVNELGKGIELP LTGGRGAYLYQLLGALLGVLAAAMGGAHVMRRRNS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:51:24 2011 Seq name: gi|227860847|gb|ACLH01000073.1| Corynebacterium aurimucosum ATCC 700975 contig00141, whole genome shotgun sequence Length of sequence - 15827 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 6, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 2696 1227 ## cauri_0187 surface-anchored fimbrial subunit - Prom 2835 - 2894 2.4 - Term 2839 - 2890 7.0 2 2 Op 1 13/0.000 - CDS 2909 - 3946 1421 ## COG0136 Aspartate-semialdehyde dehydrogenase 3 2 Op 2 . - CDS 3966 - 5231 1416 ## COG0527 Aspartokinases - Prom 5304 - 5363 1.8 4 3 Tu 1 . + CDS 5378 - 6250 774 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 5 4 Tu 1 . - CDS 6247 - 7539 699 ## cauri_0183 GPI mannosyltransferase 2 (EC:2.4.1.-) + Prom 7465 - 7524 2.7 6 5 Tu 1 . + CDS 7736 - 9550 2251 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Prom 9666 - 9725 6.4 7 6 Op 1 . + CDS 9858 - 11513 623 ## cauri_0181 hypothetical protein 8 6 Op 2 1/0.000 + CDS 11613 - 13163 1019 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 9 6 Op 3 10/0.000 + CDS 13188 - 14477 1504 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 10 6 Op 4 . + CDS 14470 - 15249 955 ## COG3442 Predicted glutamine amidotransferase + Term 15345 - 15375 1.2 Predicted protein(s) >gi|227860847|gb|ACLH01000073.1| GENE 1 2 - 2696 1227 898 aa, chain - ## HITS:1 COG:no KEGG:cauri_0187 NR:ns ## KEGG: cauri_0187 # Name: spaG # Def: surface-anchored fimbrial subunit # Organism: C.aurimucosum # Pathway: not_defined # 1 898 1 898 1428 1713 100.0 0 MTKNLQRKRYGFLRRLSAALLVPLVSGSLIAGPVVAGAQEGSELDVDVDATVSDSLDLDD DFSADDSQVVEQDSVDADAGAVEQLEVDQSEASELDADELEFGELMQPMAVRAGQSSDLK CEAGTFYAIHKWGEILEFNVDNDNWETPTIKNPGFNFRNDRFRIGYNRNGDPYVSWDEQG RQVAWNGLGITSDGQTAYAYRRLDGGNDGLDGSLIIGTADKNGSTLEASYTLEKRLSLVT GAVAPDDTYYFGGYFVYGQNGEGKAPIKEGRGEVLEAVKYTNELPPSVNVTELYSDDKVG VLGRYYKDSNNGRKYYIGADGELAYPFYNNGKRYKYYSPEVRANVTATQGFRLYSYDGTS VKHVGDIPIWNSTAKAAVNGDIAFDPAGNLYILYNPLGNSQYKIVPVTSENLDGANGGQI DSQFANTLNFPAGAIAGRNTQTNGIAFLANGELVVEITSANVYNPKVTYVMVDPTTGETS GDTKSFIQGKAKVRFENGGEAYGLFGGQTDLASCTNFSTLELQKNLPRGRAAKGDQFQLE IYGDNGTQQKWDRLTWNVTDGDKAGVQSRIAGPIVARQGKTFRVSEVATADLGYENAKFE YYTLDKDHAPKLECVDQDGDSLPPDNINPVPDSETRGSNDERAWDVTIPEGEAKQISCTI TNEPYRGDLRWTKVARETDSETGESNTISLGGSVWSLLDENKEVIPRYRGISYDNFANCE LTEKGCEAAGADSDNATGKFRVTALEYGTYYLREDVAPKGYEKLTEPIKFTFDRDGIHYD SFDELNRYNKDTNTFNLGRILNEKLQGSVKWDKVDPEKDNLLLGGSQWKLYKKNGSELEQ PGVLIEDNTGQDGYKGRDANKLPGAFEVKGLDFGTWVIEETKAPEGYRNTQPTFEFEV >gi|227860847|gb|ACLH01000073.1| GENE 2 2909 - 3946 1421 345 aa, chain - ## HITS:1 COG:Cgl0253 KEGG:ns NR:ns ## COG: Cgl0253 COG0136 # Protein_GI_number: 19551503 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 1 345 1 343 344 496 76.0 1e-140 MTTVAVVGATGQVGRVMRTLLEERNFPADTVRFFASARSAGQELTFREEKIVVEDLAEQT VESLAGIDVAVFSAGGATSKEYAPLFAEAGAIVVDNSSAWRKDPDVPLIVSEVNPQEKGN TPKGIIANPNCTTMAIMPVTKALHDAAGLTTMRVASYQAVSGSGLAGVETLVKQVASIGD RSVELVHDGSALEVSEEDLGPYVAPIAYNALPLAGNLVDDGTEETDEEQKLRNESRKILG IPELKVSGTCVRIPVFTGHTMVVHAEFEKPITPDQAREVLSSAPGVKVVDVPTPLAAAGI DLSLVGRIRQDQTVEENKGLIFVVSGDNLRKGAALNTIQIAELLV >gi|227860847|gb|ACLH01000073.1| GENE 3 3966 - 5231 1416 421 aa, chain - ## HITS:1 COG:Cgl0252 KEGG:ns NR:ns ## COG: Cgl0252 COG0527 # Protein_GI_number: 19551502 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Corynebacterium glutamicum # 1 421 1 421 421 659 89.0 0 MALVVQKYGGSSLESAERIRAVAERIVATKKQGNDVVVVCSAMGDTTDELLDLAAQVNPV PPQREMDMLLTAGERISNALVAMAVESLGAQAQSFTGSQAGVLTTERHGNARIVDVTPGR LTEALEESKICIVAGFQGVNKESRDVTTLGRGGSDTTAVALAAALKADVCEIYSDVDGVY TADPRIVHNAKKLDQLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSTDPGTL IAGSMEDIPVEEAVLTGIATDRSEAKVTVLGIPDRPGEAAKVFRAIADAEINIDMVLQNV SSLESGTTDITFTCPRSDGPKAMEILAKLKEEGHWANVLYDDQVGKVSLVGAGMKSHPGV TADFTEALRDAGVNMELISTSEIRISVLTREADLDKAAIALHEKFQLGGEEEATVYAGTG R >gi|227860847|gb|ACLH01000073.1| GENE 4 5378 - 6250 774 290 aa, chain + ## HITS:1 COG:Cgl0251 KEGG:ns NR:ns ## COG: Cgl0251 COG0697 # Protein_GI_number: 19551501 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Corynebacterium glutamicum # 46 284 1 239 239 181 51.0 1e-45 MLSNLVAVAFALASALVVAWGTVIRHRIVLDASSRSVMRTAMRTPLWWIGTGAAVVAYAL QLIALHFGTLLIVQPILVLSLMFTLPLAAWYSRRPMPAREIFWCLALTIAVSVMVVYGRP TAGLTTPTWSQWWPAFALGALTLTALFVAAYNRPEESALALGSACGILYGYVALVAKAVV DVLSHQGIAALLASWELYVLIGLAAAGTVIQQYSFHAGALAHSLPAMTIMEPIVAFGLGY WVLGEKFQVSSVAGWCVMGASLIIMIVATIVLSRIPVNPGSTQRAEQSPR >gi|227860847|gb|ACLH01000073.1| GENE 5 6247 - 7539 699 430 aa, chain - ## HITS:1 COG:no KEGG:cauri_0183 NR:ns ## KEGG: cauri_0183 # Name: not_defined # Def: GPI mannosyltransferase 2 (EC:2.4.1.-) # Organism: C.aurimucosum # Pathway: not_defined # 34 430 1 397 397 634 99.0 1e-180 MPQSHVSHNTTLLIVWQLISHIGTWWGVDRMIGVHEENSTKTTPEPGADTEVEGASSAPS SPAGAQGRLALLPVAVLVAVVGTAVRITVLSVIAGVNEQEMWGRLTAWDSKYYLEIARAG YFDADINTDGPVHEITMAFFPGFPLLLRVLGWTGISLEIAALIVNTLLTAVMAAGVMVLA RRVGAQRRGQCAAALVVSSAPMSIVFSMPYTEALFGALVVWGLIALDDRAWWRAAAFGFA LSFVRLTSVDFLAVFALWALIYGRRSWQAWLGLVVAALPLPAYLLWTQRYLADAGGYFGI QTEHWNSTFDGGAATVQFVWETLTENNDVGYLLTTLVIVGVPVLLLAAWGRVTPVAWWFS AALCANVLLSDGIMHSRPRLLLPAIILILPWVVRAASALRPRVLWAACGAWVLWSAWFSA YMLVVFEWAI >gi|227860847|gb|ACLH01000073.1| GENE 6 7736 - 9550 2251 604 aa, chain + ## HITS:1 COG:Cgl0250 KEGG:ns NR:ns ## COG: Cgl0250 COG0119 # Protein_GI_number: 19551500 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Corynebacterium glutamicum # 1 603 1 603 616 996 78.0 0 MSPNDSFISAPREITTPAGPRNDNQPAWNKQRGSSMPVHRYQSFAEEVEPVSLPDRTWPD KKITVAPQWCVVDLRDGNQALIDPMSPERKHRMFDLLVKMGYKEIEVGFPSASQTDFDFV REIIEGNKIPEDVTIQVLVQAREHLIRRTFEACQGAKNVIVHFYNSTSKLQRRVVFRKDR PAIKKLATDAAELIKSIAKDYPDTNWRWEYSPESFTGTELDFAVEVCDAVVDIMEATPEN PMIINLPSTVEMISPNVYADQIEWMHRNFARRDSIIMSLHPHNDRGEGIAAAELGYMAGA DRIEGCLFGNGERTGNVDIVTLGLNMLTQGVDPQIDFSDLPKIRETVEYCNQLRVPERHP YGGELVFTAFSGSHQDAINKGLDALAQEVRPGANNTEVSWEELQETTWEVPYLPIDPKDV GRDYQAVIRVNSQSGKGGVAYIMKTDHGINMPRAMQAEFSSVVQAVTDAEGGEVNSKNMW DIFANEFLERTSPLELVSFQVDNSTTEDEDAKVTATIAFNGEKRIVSGIGNGPIAAYANA LEDVGIDFEVIDYSQQSRTSGDDAEAACYIAAEVNGAQVWGAGIAGSTTRASINAITSAV NRAD >gi|227860847|gb|ACLH01000073.1| GENE 7 9858 - 11513 623 551 aa, chain + ## HITS:1 COG:no KEGG:cauri_0181 NR:ns ## KEGG: cauri_0181 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 551 1 551 551 761 100.0 0 MTVTNYVVPHCGFGEPRRLTVGTVNPEVFLQLLSSAEDNLLPVTLCGHSKSGFRVRYEED IVGIIPASQSADYAELDPIIGAGLTPQATAEILLREDAETDGIPSFEVLLPEPGLCVPQN VPPAQRWGLLSGDHSLHITEFASSSHSLPEHPAQLLVRLSNSRRFFRRAIEIHVDDELVA TIPHNQATRLSTTIAGFKHEGLIAVARAYFTPDPDSPTLTIYAEEGTPDTSLAEGTASVI AAAAGAAAATVANAGKAHAAISPLGGTHATAVAHTATSTASQGAQVLSLNSAAASATAGT QLAAASTGFKLACAAGAAVVVGGTAGVAFLPGTPRPSHDHVTDSAMTENGTSLHAAKPDR DIRTNSERSATAEAAKGTLPGARRSESQDVEATSRTLDHSAFPTAAETTVTTKLSEPTEL PEPTDLSEPALPGEPAARTPHLHGNSPTADAGTPSPTPAPQATQPSRAPYSAPRTAPAST PIPATSAPDTSAQPTPHTPPTTAPPANQDRSDEGGQAPVTVTARPTATRTVQPPQELVPD HDGDVTVIEFG >gi|227860847|gb|ACLH01000073.1| GENE 8 11613 - 13163 1019 516 aa, chain + ## HITS:1 COG:Cgl0248 KEGG:ns NR:ns ## COG: Cgl0248 COG0847 # Protein_GI_number: 19551498 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Corynebacterium glutamicum # 50 395 3 351 360 316 54.0 6e-86 MTTTPGPSKPATQPSAAGTPAAASPNTNAPKPGPRPHQAAQKQTGNEQQTAQPHKDDNKD KATAREEALAAFPFVALTIQTTGIHPSTGRLLTVDALTLNAEGEIGQEFHAVINPGEDPG PKHLHGLSAEEVQAGQSFSMLLKPLDRLIDGRTLIVHDAPYTWGFIVSEARRAMTAAARQ NRARNRNRGKGRRRRFKVGHVPTPVAIVDTLATARRQSVWGTDIRLATVARDTGLPAPDP TASVERAQKPEKETSREATRLLVDLYRAQASGPLSSAAPDDLRADRFGLQRSHVRVDAAE APRQHHNPGAYVPGKELIRGMEIVVAPEITEDPDTIIAALAREELNYSEKLTRETSLVVC NITTNLVGKPMHAHRKDIPLMSDVAFLAALERIEEPTEPEEESGSKSTGNSGGRHSSGQS NRNRSTNKNRRRSRRKSSGTQHSAKQEHAQKKHQGSSSDGSASDKRAQSDSDSNNRNRGG NKGRRRRRRGGRGRRGSGNHQKQQNSGHNRSHNTDS >gi|227860847|gb|ACLH01000073.1| GENE 9 13188 - 14477 1504 429 aa, chain + ## HITS:1 COG:Cgl0247 KEGG:ns NR:ns ## COG: Cgl0247 COG0769 # Protein_GI_number: 19551497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 1 418 1 417 423 519 68.0 1e-147 MNFNFRSAFSSARTAVATTAAALATTASRATGRGAGGMIGGLIANAIDPTIMQNLANQRP AILVTGTNGKSTTTRMLAAAVRAEHTVATNDGGDNMDAGIISALLAGKDASHLVLEVDEL HVPHVADNLNPTALVLLNLSRDQLDRVGEINKIERALRGAVEAHPDMLVIANCDDVLMTS VAYDAKNVIWVSAGAGWMGESVTCPRTGGHIVREGEDWHAVKPLADGRAFRRPTPTWAVT EDGLVSPEGVDKLRLSLPGRANRGNAAQAVAAAVEAFGVDRHKAIAAAEGVDDVAGRYST ITLGKRTIRLLLAKNPAGWQEALSMVDREADGLVIAANGHVADGIDMSWLWDVRFEDFEG IPVKAAGERGTDLAVRLVYADISHELIADPLAAIQSCPEGRIEVLANYTAFRDLKKALTA AAAKEHSND >gi|227860847|gb|ACLH01000073.1| GENE 10 14470 - 15249 955 259 aa, chain + ## HITS:1 COG:Cgl0246 KEGG:ns NR:ns ## COG: Cgl0246 COG3442 # Protein_GI_number: 19551496 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Corynebacterium glutamicum # 1 249 1 249 250 325 72.0 4e-89 MTSLQIGLILPDILGTYGDDGNALVLRQRARMRGHEAEIVPIKLGEPVPDSLDVYTLGGG EDTAQILAAEHLIADGGLTRAAAAKRPILAICAGLQVLGESFRASGRVVDGVGLIDATTA SMTERAIGEVATEPTKAGITAELTEPLTGFENHMGATILGPAAQPLGTLTRGTGNADTAA ILDLSDRAVQRGAEGAVQGSVIATYMHGPVLARNPQLADLLLAKAMGVALSELEPLNIPA INQLRTERFNASEPPRSQR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:51:58 2011 Seq name: gi|227860846|gb|ACLH01000074.1| Corynebacterium aurimucosum ATCC 700975 contig00142, whole genome shotgun sequence Length of sequence - 7261 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 663 - 941 87 ## gi|306819590|ref|ZP_07453289.1| conserved hypothetical protein - Term 922 - 965 -0.4 2 2 Tu 1 23/0.000 - CDS 1010 - 1666 720 ## COG0353 Recombinational DNA repair protein (RecF pathway) - Term 1712 - 1760 12.0 3 3 Op 1 30/0.000 - CDS 1780 - 2160 172 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 4 3 Op 2 . - CDS 2218 - 4824 2012 ## COG2812 DNA polymerase III, gamma/tau subunits 5 3 Op 3 . - CDS 4857 - 5471 536 ## cauri_0173 hypothetical protein 6 3 Op 4 . - CDS 5419 - 6732 1983 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 6763 - 6822 3.2 + TRNA 7037 - 7125 64.6 # Ser GGA 0 0 Predicted protein(s) >gi|227860846|gb|ACLH01000074.1| GENE 1 663 - 941 87 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|306819590|ref|ZP_07453289.1| ## NR: gi|306819590|ref|ZP_07453289.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] # 9 86 163 241 245 114 60.0 3e-24 MRSNRTGRLEVESHLYQTVQCADWIFALLGRISAYKYDPDFKDFDWAIKYFGNRLAHASS PHSKIRAAGTGRDVYANHLGSYRSCFPNPKSP >gi|227860846|gb|ACLH01000074.1| GENE 2 1010 - 1666 720 218 aa, chain - ## HITS:1 COG:Cgl0245 KEGG:ns NR:ns ## COG: Cgl0245 COG0353 # Protein_GI_number: 19551495 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Corynebacterium glutamicum # 1 218 1 218 218 357 82.0 7e-99 MFEGPLQDLIDEFSRLPGIGPKSAQRIAFHVLHQDPEEIDRLQKALGAVRDGVTFCRICC NISREEVCRICINSQRDASTICVVEEPKDIQVIERTGEYDGRYHVLGGALDPLANVGPKD LNISQLLQRLGGVLPDRELADSTPEEPLYDDSPDITEVILATDPNTEGEATAAYLVRLLR DFPGLKITRLASGMPLGGDLEFVDELTLSRALSGRLTV >gi|227860846|gb|ACLH01000074.1| GENE 3 1780 - 2160 172 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 9 107 7 105 114 70 35 3e-12 MTENDPMQQANDMNEILAQAARVQAELEKAQKEILAATVEGSAGNGLVKVTMTGGAELQS VSIDKSVVDPEDIDTLQDLIVGAFKEAHAAAGRLAQEKIGPLSQGMGQSQQNYDGPSIQD VFGGNQ >gi|227860846|gb|ACLH01000074.1| GENE 4 2218 - 4824 2012 868 aa, chain - ## HITS:1 COG:Cgl0243 KEGG:ns NR:ns ## COG: Cgl0243 COG2812 # Protein_GI_number: 19551493 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Corynebacterium glutamicum # 72 868 1 704 704 477 45.0 1e-134 MALYRKYRPATFAEVVGQEQVTTPLSAALDAGRINHAYLFSGPRGCGKTSSARIMARSLN CEQGPTSTPCGVCDSCVSLAPGGPGNLDVTELDAASHNGVEDMRELRDRAYYAPAESRYR IFIIDEAHMISASGANALLKVVEEPPEHVIFIFATTEPEKIIGTIRSRTHHYPFRLLTPP AMKGLLERTVASENVHVDDTVYPMVIQAGGGSPRDTLSILDQLLAGAGPDGLTYDVARPL LGVTDEGLLDNTIEALASQDKAGLFRLVDDVIEAGHDPRRFAIDLLDRLRDLMILQAVPS ALEEGLVSAPTDRGEVLTAQAQRFSGPQLAYLAETVNERVSSLRGATSPRLLLEILCAHL IVGAAPAAAAAGQLPTAAPQGAGAQPSAPAGQPTAPAQRQQSAVASAQDPAAAAAAIIAQ RRSRQAAKQEAQQQQPLQQPQQAEKAQEAVQQAQQTPAPEDSQPQVPERSAQPEAQPEPQ PEQPKQRQEQPERQQQEQHEQQQQEQTEQQEQAREQHPEAEQPQDPAAEIRGRWSDLRAT IGRRNKVAEIMLAEARVLGVRDDTLVLGHTTGALAERINSPGTNEVIVTVLQEELNRTLK VTCVIGTDPKAHGFTVTEPVQRTQWNPNQPPREPAEPDEEAESPETPDDATDSHSSETAP ASTAETESEEVGKTSEPEVKERGDASDDPWGAPRRIGQQGPSSEMTADQPQSQHGAREDA GTRPETAPRGAAVPPKREARGSQWRSRIAQASQVAAQRDEEFSKVPKFGNGVPLPPEPGP DEGEFEAPPEDYGPPAGMGGAPESAGQAPAAPQQPAPQQAPAPQPEYTRADEEREMMEAA QNAGEMDHRNATEVAMELLAQELGARRL >gi|227860846|gb|ACLH01000074.1| GENE 5 4857 - 5471 536 204 aa, chain - ## HITS:1 COG:no KEGG:cauri_0173 NR:ns ## KEGG: cauri_0173 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 47 204 1 158 158 270 99.0 3e-71 MAWPPVCCSPHWRSWGHKAINSDETAYWLDQIIPAELAFKNVEGQRLGLASLEGEQSLAV TCGFADVDTGLAHAEQGIDVRCELLTVARTNQAEAAAAVSAAAALLTESAGLLPAQPGLL LPKLFAEGDERFAHVSVRHGMLIAPYLWGGQTPQVAEEGRLTLVCQLLMLSDAEYAYAVE EGVPALQQAVAEQGIDLLDWQRSE >gi|227860846|gb|ACLH01000074.1| GENE 6 5419 - 6732 1983 437 aa, chain - ## HITS:1 COG:Cgl0241 KEGG:ns NR:ns ## COG: Cgl0241 COG1167 # Protein_GI_number: 19551491 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Corynebacterium glutamicum # 15 433 4 422 426 564 62.0 1e-160 MVAICPHYVPEGRRMSLLNLEKSELTELAAQVRKDYEALKAEGLELDLTRGKPSKAQLDL SNDLLVLPGRGHYTDAAGNDLRNYGNQKGIKELRELWGKLTNMDPELLIAADSSSLNIMY DLILWAYTFGTNSSEKPWSKEETIKWICPTPGYDRHFAITESFGFELISVPMEEDGPDIE AVEELAKDPQVKGMWVVPMFSNPSGAVISEEKTRRLAAMETGAPDFRIVWDNAYAVHTLT EDFPEVLPILEIAEQEGNPDRFWAMSSSSKITFAGSGVSFFGSSADNLKWYLEHAGIRGI GPNKINQLAHYEFFGSAEGVRAVMRRHAALLAPKFEAVLRILDKNLTHHEIADWTHPEGG YFISLNVLEGTATRVWELARDAGILLTKAGSAFPYGKDEKDHNIRLAPSLPPQEEVEAAM DGVATCVLLAALEKLGA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:10 2011 Seq name: gi|227860845|gb|ACLH01000075.1| Corynebacterium aurimucosum ATCC 700975 contig00145, whole genome shotgun sequence Length of sequence - 1398 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 263 - 322 2.5 1 1 Tu 1 . + CDS 439 - 1383 517 ## cauri_0171 putative transposase Predicted protein(s) >gi|227860845|gb|ACLH01000075.1| GENE 1 439 - 1383 517 314 aa, chain + ## HITS:1 COG:no KEGG:cauri_0171 NR:ns ## KEGG: cauri_0171 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 314 90 403 403 640 99.0 0 MPTTTDPYRVYDQVFIDGTYFHKKCLLVACTETHVIAWHWCLRESSYEYLKLLDKIAQPL IVTTDGAGGALKALRIKWPDVAIQRCLVHVQRNTFADISRNPIHPAHKAIRKLGYMLVQV HNREDAARFTAAVHHTRITFADWLKERTYRSAIPAGQVPKWVSPNQKWWYTHRNARRALK RLEKLIHAGQLFTFLDPPEGVTQDLKATTNLLEGGINKQLKDLAGNHRGMFDEHQRITMD WWLYTHTEDPVAPLELTKQQDFGRQGEKAARAAWAKEELTRRGHPDGRPATYDTHIDNEW NPSLGIRKGWAGRS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:15 2011 Seq name: gi|227860844|gb|ACLH01000076.1| Corynebacterium aurimucosum ATCC 700975 contig00146, whole genome shotgun sequence Length of sequence - 633 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) Predicted protein(s) >gi|227860844|gb|ACLH01000076.1| GENE 1 3 - 587 260 194 aa, chain + ## HITS:1 COG:mlr6150 KEGG:ns NR:ns ## COG: mlr6150 COG2801 # Protein_GI_number: 13475138 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 5 183 106 283 286 142 46.0 5e-34 TTIQAKRKSSLPDLVKRMFDTGELNRVWMSDITYLRTGEGWLYLCAVRDGHSRRVLGWAM DSVQDTSLVERALRMAHTLRGDVPDGLVFHADRGTQFTSEKLWEVCSRLGIAQSVGRTGV CFDNAMAESFWSTLKTEFYDRKRWASRDAARKAVAYWIEVVYNRRRRHSALGMVSPVDFE NHAGAINSRKEIAA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:16 2011 Seq name: gi|227860843|gb|ACLH01000077.1| Corynebacterium aurimucosum ATCC 700975 contig00150, whole genome shotgun sequence Length of sequence - 551 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 456 261 ## cauri_1014 putative transposase Predicted protein(s) >gi|227860843|gb|ACLH01000077.1| GENE 1 3 - 456 261 151 aa, chain - ## HITS:1 COG:no KEGG:cauri_1014 NR:ns ## KEGG: cauri_1014 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 151 153 303 480 309 99.0 2e-83 MTTLYFETDTADELRKPGFSKERRLEPQILVGLLTDATGFPLHAGAFAGNSAETHTMLPM ITRFQEAYQLDEVTVVADAGMFSAANKQALIDAGLHYILSVKTPTVPEVIETWRWEHPGE DYTHGQIWTQASASDGRKHTTPNTVTHYQYS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:20 2011 Seq name: gi|227860842|gb|ACLH01000078.1| Corynebacterium aurimucosum ATCC 700975 contig00157, whole genome shotgun sequence Length of sequence - 588 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 587 140 ## COG4584 Transposase and inactivated derivatives Predicted protein(s) >gi|227860842|gb|ACLH01000078.1| GENE 1 2 - 587 140 195 aa, chain - ## HITS:1 COG:SMa1070 KEGG:ns NR:ns ## COG: SMa1070 COG4584 # Protein_GI_number: 16263032 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 12 168 230 386 530 105 36.0 4e-23 SNAISTADRNRKVNDTYQQFLEHHNTAALPTRARRPKDKANVEAAVKIVTHKIIHALEGH QCVDLDELNGKIVGLVDAINRSVPFRSQQSSRRELFEEHEQHLLADLPTTPWQHTEWKRA KVAPDFHITVATVRYSVPHQLVGRTVDVRITGQVLTVFDQGTTVATHRFRISVGPMSLTM STFHLEWTPPVDCGQ Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:25 2011 Seq name: gi|227860841|gb|ACLH01000079.1| Corynebacterium aurimucosum ATCC 700975 contig00160, whole genome shotgun sequence Length of sequence - 13628 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 3, operones - 3 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 332 - 374 6.2 1 1 Op 1 1/0.000 - CDS 423 - 1682 686 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 2 1 Op 2 . - CDS 1720 - 1908 251 ## COG2835 Uncharacterized conserved protein 3 1 Op 3 . - CDS 1911 - 2504 487 ## cauri_1340 hypothetical protein 4 1 Op 4 . - CDS 2540 - 4063 1212 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 5 1 Op 5 . - CDS 4144 - 5271 598 ## cauri_1342 hypothetical protein 6 2 Op 1 . - CDS 5451 - 6194 653 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 7 2 Op 2 . - CDS 6191 - 6520 336 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 6679 - 6715 6.3 8 3 Op 1 16/0.000 - CDS 6734 - 8158 1611 ## COG0165 Argininosuccinate lyase 9 3 Op 2 4/0.000 - CDS 8191 - 9405 1540 ## COG0137 Argininosuccinate synthase 10 3 Op 3 4/0.000 - CDS 9481 - 9966 443 ## COG1438 Arginine repressor 11 3 Op 4 9/0.000 - CDS 9971 - 10888 1089 ## COG0078 Ornithine carbamoyltransferase 12 3 Op 5 13/0.000 - CDS 10885 - 12063 832 ## COG4992 Ornithine/acetylornithine aminotransferase 13 3 Op 6 10/0.000 - CDS 12060 - 12995 984 ## COG0548 Acetylglutamate kinase 14 3 Op 7 . - CDS 13014 - 13628 621 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) Predicted protein(s) >gi|227860841|gb|ACLH01000079.1| GENE 1 423 - 1682 686 419 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 10 384 16 384 418 268 41 1e-71 MNIIDELQWRGLINQSTDLDALREACEEPITLYCGFDPTGDSLHAGHLVPMIMLRRFQKA GHHPIALAGGATGQIGDPRDVGERTMLSQETINDNMVAIKKQLRQFIDFAGENAATMVNN ADWTSKMTVIDFLRDVGKNFSLNTMLDRDTVKRRLESDGISYTEFSYMLLQSNDYVHLHD EFDCILQIGGGDQWGNIVSGVDLNRRVKGAKVHGLTVPLVTDAQGQKFGKSTGGGKLWLD PEKTSPYSWYQYFLNAGDSVVIDYLRWFTFLSQEEIAEYEQKVAEEPFRREAQRRLAQEM TNLVHGEEATKSVKLATQALFGKAELADLDEQTLVGALSETTVADIAAGEPRTIVDLLVA CGLADSKGAARRTIKEGGAYVNNQRIESDEWEPAAEDLLHGAWLVLRRGKKNFAGAKLN >gi|227860841|gb|ACLH01000079.1| GENE 2 1720 - 1908 251 62 aa, chain - ## HITS:1 COG:Cgl1372 KEGG:ns NR:ns ## COG: Cgl1372 COG2835 # Protein_GI_number: 19552622 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 62 1 59 59 73 62.0 1e-13 MALMSLDSQLLDILVCPQDKGPLKYLAEEQVLVNERLGVAYPIENDIPVMLVDHATPWPR QN >gi|227860841|gb|ACLH01000079.1| GENE 3 1911 - 2504 487 197 aa, chain - ## HITS:1 COG:no KEGG:cauri_1340 NR:ns ## KEGG: cauri_1340 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 197 1 197 197 356 100.0 3e-97 MNALNSRKVVVGVAVTALVVVLHVLSGGGLGFLWPVVAICTGMAAGFVTPPRQEKVLEPP KAGEGELIHTLEEVRYTFTAHKLPSPVQRAWDSFDESAVWVLDNWHRLDEAPHQQALVRD MIEEHSKELVKSYLDVTDLKDPVAVEEMSESLGILGREMEQIKEAISQNSVRKLRNHSMA LKLEYGGTLPSVESREV >gi|227860841|gb|ACLH01000079.1| GENE 4 2540 - 4063 1212 507 aa, chain - ## HITS:1 COG:Cgl1370 KEGG:ns NR:ns ## COG: Cgl1370 COG2304 # Protein_GI_number: 19552620 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Corynebacterium glutamicum # 28 507 41 525 525 421 49.0 1e-117 MALTSCSMGELFDDSQKPGAGNSFSGGLRIVAATELEPLEPVLADASQDLGFDITMTTED GTLANSRTLKRGGFEGTYDATWFATNRYARIIGVDGQLGREHSVARSPIALGVQSSVAQA QGWTSKQPTWQEIADSGITFGMTDPSTSNSGFSALSAATTAFADTGRALTEKDIKQSAGK VQKLFGNQTLTSGSSGWLADRFREHPEQADAIFNYESVLYQLKDEGADLEVVIPSDGVIS ADYPLSSLASSSDKDTEAKVQALAEWLAERPDKLTSFHLRVDNSDLPGTVFELPYPANEQ TVDALEAAFAHELRNPGNTALVLDTSGSMEGERMDLLKSSLLPLIDGSADGVPDGEGQVA FRNREQIKLIPYSSEPQQPTRARVDKDKPATTKELADRVERLVADGDTATFEAVLNAFDE VDTSGGDIGTVVLMTDGEVTRGRTFAQFKDAYAQLPEDKKEIPVFVILYGEANIQEMEEL AQLTGGKTFDALNGDLAAAFEEIRAYQ >gi|227860841|gb|ACLH01000079.1| GENE 5 4144 - 5271 598 375 aa, chain - ## HITS:1 COG:no KEGG:cauri_1342 NR:ns ## KEGG: cauri_1342 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 375 1 375 375 711 100.0 0 MSSTSSTKRTKSFVIAAVFIVLAVASLAVGRGGDSLPKFNFFKDTTLVTGAISPELEATF KDPAMLEALEKHNIEVELDVVPAGDFVEHSSSVDKDYDFILTDPNGAAWVSDLRNANPEL AELDEGSPMVFGNQLLVLVHSELVEDMKNHDLVTESGNLASLNVETLVDMSQDNTRWRDI SPAFGSPRVVDVAVPQVSQSFAALRYARLIRTVGEDYAERELGRDDKAKIDAEADNIMRR LVSEQGYSETTEQGILDAFLRVDKGEMPMVLATTNQYVRLLHEDEDLSRYTPLALNPPTT LISIVIPRTEEGELFAKAMNEDGIPAVSESLGLSTHGSGFSSKFDPSSDHSIPVDGGEYS QLRWADFEEILRVVD >gi|227860841|gb|ACLH01000079.1| GENE 6 5451 - 6194 653 247 aa, chain - ## HITS:1 COG:AGpT54 KEGG:ns NR:ns ## COG: AGpT54 COG2423 # Protein_GI_number: 16119828 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 120 242 216 338 371 173 65.0 3e-43 MTGWLYWGNWAATLVADGTAVAIYIKWFGQYTSWLDAVPQWLLALGVVCSILLFNMLSVK IFGELEYWFSMIKIVALIIFMVVAIGVVILGHPNGDPTGFSLIVDAGGWLPNGLLPAVIV QGADIITTCTADKAQNQILAERHVLPGVHLNAVGGDCPGKTELESSILDKSKVFVEFPEQ TRIEGEIQQKPEDFPVVEFYQVLTGQATGRDSEEQITLFDDVGFAINDFSALRYLRDSVR GTDLAPT >gi|227860841|gb|ACLH01000079.1| GENE 7 6191 - 6520 336 109 aa, chain - ## HITS:1 COG:AGl2082 KEGG:ns NR:ns ## COG: AGl2082 COG1113 # Protein_GI_number: 15891158 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 106 10 100 485 128 65.0 2e-30 MTETLRPPNTESHEKEKAVYASEDQGLQKGMSNRQLQMIAIGSAIGTGLLLGTGGRLQTA GPFLAVLYLVCGFFGYIILRSLGELIVYRPSSGSFVSYAREFYGEKPPS >gi|227860841|gb|ACLH01000079.1| GENE 8 6734 - 8158 1611 474 aa, chain - ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 2 474 4 476 477 760 83.0 0 MHKTNEGALWGGRFSGGPSEAMFALSVSTHFDWVLAPYDVLASKAHAKVLHKAGLLSDAD LDTMLNGLSELGEKVASGEFTPLPTDEDVHGAMERGLIDIVGPEVGGRLRAGRSRNDQVA TLFRMWIRDAIRDIALQVTDLVEALADQAEAHPDAIMPGKTHSQAAQPVLLAHELLAHAQ PLLRDIERLQDLDKRLAVSPYGSGALAGSSLHLDPEAIAEELGFDSSAENSLDGTAARDF ASETAFVLTQIAVDMSRLSEEIIYWCTPEYGYVTLDDAWSTGSSIMPQKKNPDVPELTRG KTGRLIGNLTGLLATLKAQPLAYNRDLQEDKEPIVDSVAQLNLLLPAMTGLVETLTFHED RMRELAPRGFTLATDLAEWMVRQGVPFREAHEASGACVQIAESRGVDLVDLTDEELAGVD KRLLPEVREVLTIDGAVASRSTKGGTAGIRVVEQREKVRERARGAREWAQIPLR >gi|227860841|gb|ACLH01000079.1| GENE 9 8191 - 9405 1540 404 aa, chain - ## HITS:1 COG:Cgl1367 KEGG:ns NR:ns ## COG: Cgl1367 COG0137 # Protein_GI_number: 19552617 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Corynebacterium glutamicum # 1 399 1 399 401 685 82.0 0 MTARVVLAYSGGLDTSVAIPYLAKMTGGEVIAVSLDLGQGGEDMESVRQRALDCGAVESI VVDAKDEFAEEYCLPTIKANGMYMKQYPLVSAISRPLIVKHLVEAAQAHGGTHVSHGCTG KGNDQVRFEVSFRALDPALEIIAPARDYAWTRDKAIAFAEEINLPIEQSAASPFSIDQNV WGRAVETGFLEDLWNPPTKDLYAYTEQPDLGNAPDEVTITFDKGVPTAIDGKPVTVLQAI EELNRRAGAQGIGRLDMVEDRLVGIKSREVYEAPGAMVLIKAHEALEDVTVERELARYKR LTDARWSEEVYDGLWFSPLKRSLDAFTESTQENVTGDIRMVLHAGTATVNGRRSGQSLYS FDLATYDTGDTFDQTAAKGFVQLHGLSTQISNQRDRDGGFPTGK >gi|227860841|gb|ACLH01000079.1| GENE 10 9481 - 9966 443 161 aa, chain - ## HITS:1 COG:Cgl1366 KEGG:ns NR:ns ## COG: Cgl1366 COG1438 # Protein_GI_number: 19552616 # Func_class: K Transcription # Function: Arginine repressor # Organism: Corynebacterium glutamicum # 7 159 2 154 156 199 74.0 2e-51 MTTTPTTRNARQAKILEILDRTRVTSQVQLSELLLDEGIDITQATLSRDLDELGAKKVKR DGGRSFYVVGGELEQFEDQLNGPREKLRRMLDELVVSHDFSGNIAMLRTPAGAAQYLASF IDRVGLPDVVGCIAGDDTIFVLAREGLGGRELAEKLTSRGI >gi|227860841|gb|ACLH01000079.1| GENE 11 9971 - 10888 1089 305 aa, chain - ## HITS:1 COG:Cgl1365 KEGG:ns NR:ns ## COG: Cgl1365 COG0078 # Protein_GI_number: 19552615 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Corynebacterium glutamicum # 3 302 7 317 319 468 76.0 1e-132 MSVRHFLADDDLTPQEQAEVLDLALKLKKEPFAERPLEGPKSVAVLFDKTSTRTRFSFEA GIAHLGGHAIVTETKSTQMGKGETYQDTAAVLSRFVEAIVWRTYAHQNLLEMAETATVPI VNALSEDLHPCQILADLVTCRENFGDLAGRKAVYLGDGNNNMANSYMLGFATAGMEMTII APEGFQPQPEFVERARKRGTVTVTDSLEAVDGADVVITDTWVSMGQEDDGKDRRTPFLPY QVTPEVMSRAKEEAIFLHCLPAYRGNEVTAEVIDGPQSRVFDEAENRLHAQKALLVWLLA AQEEN >gi|227860841|gb|ACLH01000079.1| GENE 12 10885 - 12063 832 392 aa, chain - ## HITS:1 COG:Cgl1364 KEGG:ns NR:ns ## COG: Cgl1364 COG4992 # Protein_GI_number: 19552614 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Corynebacterium glutamicum # 9 388 5 390 391 511 68.0 1e-144 MTAQTTLTQRWGEVLSNTYGTPPVAIVSGKGATVTDEDGKEYIDMLAGIAVNSLGYAHPA IVEAVSTQVATVGHVSNLFASKPVVEAAGKLLEKVGDTDARVFFSNSGAEANEAAFKLAR LTGRRRILAAHHGFHGRTMGSLAMTGQPSKRKAFEPFPGGVEFYTYGDIDYLTTLVEQNP EDTAAIILEPIQGETGVIPAPDGFLSAVRELCTTHGILMIVDEVQTGVGRTGDFFAFQHE DVFPDVITMAKSLGAGMPIGATIARGQAKGLFTPGSHGTTFGGNPVSCAAAATVLELVDD PFLAEVTRKGEWLRTELAKSPAVQSVRGRGLMLGVVLNKSVAKDVVAAGLQHGLILNAPS SEVVRLTPPLVITDEELAQAVERLHKVLEDIG >gi|227860841|gb|ACLH01000079.1| GENE 13 12060 - 12995 984 311 aa, chain - ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 1 309 4 312 317 467 80.0 1e-131 MIQGLSNVDRATVLAEALPWLQHYRDKIVVVKYGGNAMVDDSLKAAFAADMVFLRTVGAK PVVVHGGGPQINEMLGKLGIEGEFKGGFRVTTPEIMDVVRMVLFGQVGRGLVNLINSHGP YAVGTSGEDAGLFKARKRLVEVDGEPTDIGMVGDIVSVEPSAVMDIIEAGRIPVVSTIAP GNDGEVYNINADIAAGALARALGAERLVILTNVEGLYTDWPNRDSLVSKIEVDKLKTLLP GLDSGMIPKMESCLMAVEGGVSAAHVIDGRIAHAVLLELLTTGGIGTMVLPNDYNREDYP EGTVFRKDDNK >gi|227860841|gb|ACLH01000079.1| GENE 14 13014 - 13628 621 204 aa, chain - ## HITS:1 COG:Cgl1362 KEGG:ns NR:ns ## COG: Cgl1362 COG1364 # Protein_GI_number: 19552612 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Corynebacterium glutamicum # 1 204 185 388 388 260 73.0 1e-69 VVCVTTDAVASPQALHSALQAASDQTFNTLDVDGSTSTNDTVIILSSGASGVEPSQEELD AAVLEVCSDIADQLQADAEGVTKRVKITVEGTSTDEQALNAARTLGRDNLFKCAMFGSDP NWGRVLAAVGMADADMDPENISVFFNDQAVCVKSTGAPGARDVDLSGADIDVRVDLGTGG SGTAFVRTTDLSHDYVEINSAYSS Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:52:37 2011 Seq name: gi|227860840|gb|ACLH01000080.1| Corynebacterium aurimucosum ATCC 700975 contig00161, whole genome shotgun sequence Length of sequence - 7598 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 3, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 11/0.000 - CDS 2 - 563 623 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 2 1 Op 2 . - CDS 647 - 1690 746 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Term 1759 - 1814 15.1 3 2 Op 1 . - CDS 1836 - 2288 474 ## cauri_1353 putative secreted protein - Term 2394 - 2434 4.2 4 2 Op 2 40/0.000 - CDS 2462 - 4975 2606 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 5 2 Op 3 4/0.000 - CDS 5005 - 6051 1085 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 6088 - 6147 1.8 6 2 Op 4 . - CDS 6154 - 6954 546 ## COG0566 rRNA methylases - Term 7008 - 7053 11.3 7 3 Tu 1 . - CDS 7074 - 7526 680 ## cauri_1357 hypothetical protein Predicted protein(s) >gi|227860840|gb|ACLH01000080.1| GENE 1 2 - 563 623 187 aa, chain - ## HITS:1 COG:Cgl1362 KEGG:ns NR:ns ## COG: Cgl1362 COG1364 # Protein_GI_number: 19552612 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Corynebacterium glutamicum # 2 187 6 190 388 185 67.0 3e-47 MITAPAGFLAAATRAGIKPSGKPDMALVVNQGPNFDAAAVFTRNRVVAAPVKLSREAVAD GTLQAVIYNSGNANACNGEQGDKDAAAMVAAVSEHTGIPVGNIAACSTGLIGEPLPMEQA LAGIGVVAGDLGADKAHGQAAAEAIMTTDTVTKEAVVESDGWSMGAMGKGVGMMAPSLAT MLVCVTT >gi|227860840|gb|ACLH01000080.1| GENE 2 647 - 1690 746 347 aa, chain - ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 1 347 11 357 357 456 66.0 1e-128 MTISVAIAGATGYAGSEILRLLLSHPAYLSGDLRIGALTGHSNAGQRVSELMPHLPQLAD RVIEDTTPEVLAGHDIVFLGLPHGHSADIGRQLGESVTVIDCAADFRLRSKEDWDAFYGG EYAGSWPYGIPEVPGNRDKLKGSNRVAVPGCFPTTITLGALPAVAKGLIEPDLSVIAITG VSGAGKKASVAQLGAETMGNLKAYKPGGTHRHTPEVLQNLQPFTQDSVSVSFTPVLAPLP RGILATITAPLKGDVDKHSVAQAFRDFYAEEPFCLVLPEDQQPETQNVVGTNMVHIQAHV DERTQRLVITAALDNLCKGTAGAAVQCMNLTLGWEETSGLPQAAVAP >gi|227860840|gb|ACLH01000080.1| GENE 3 1836 - 2288 474 150 aa, chain - ## HITS:1 COG:no KEGG:cauri_1353 NR:ns ## KEGG: cauri_1353 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 150 1 150 150 275 100.0 3e-73 MRLISRLTATAAVVGTLTIAPHASADLSQGFSNADGTVNCEAANIDGTYVARLSNGARAT SPECNPPGQLAPRFFYHAGRSKADCFNQGLTPSSFKRLQPGQVHQFNEVTAIADAQGGIH FVGPQGYLGYAGKKAVSGAEGLGQVSSRVM >gi|227860840|gb|ACLH01000080.1| GENE 4 2462 - 4975 2606 837 aa, chain - ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 163 837 1 673 673 909 72.0 0 MLISQDWVTRLLGTANSGWNVSAEELDSGFVRVGFETEGYEALPETTGPLVIGQVVEIEE LTQFKKPIRYCQVNVGQANGTGKLQGIICGARNFRLNDYVVVSLPGAELPGGFKIAARET YDHISNGMMCSAAELGFGPKADGIIVLGEEVADKIGEDARPIIGLSDTVFDVNITPDRGY ALSARGLTREIASAFDVAFPDVAQDPSVAGIDTSAVPGPKGELIAVDLREETKAQRFGLR KVSGIDPAARTPFWMERELMLSGQRSVNLATDVTNYVMLLLGAPMHAFDANVVSGDLVVR NASEGEMFETLDHVKRELSTGDVVICDDNGIQSLAGVMGGTTSEISEMTTDVYFESAIWD PITVARTSRRHKLSSEASRRFERGVDPAIVEVALDVACALLQQIAGGTIEEGRTLVGDVA KREPITLRAAKPSEYAGVGYSRETVVKRLTEVGCEVSGEEELSVVPASWRTDIEMDVDLI EEILRLEGLEDIPTILPTPVGGRGLTPAQKRRRAIGHALAYAGYAEVLPSPFIANDTFDT WGLNKEDPRRRTVAVQNPLESDKSVLSTTLLPNLLEAIARNVARGRSDLALFGLQQVAFK RADASPMPSVESRPEDSVVTELVESLPLQPLHVATVATGNIEHEGPWGSGRAYSYADAIE SARQVARAAGVDITVKAAEQLPWHPGRCAALVLTADEETVVGYAGELHPQVLEALELPAR TCAMELDVTALPLDEKFPAPILSSFPALHQDIALVVDEDTPAEAVRRVVEEGAGELLESV ELFDVFRGEQLGEGKKSLAFQLLFRADDRTLTDEKANEHRLAAADLAKQRLGAEMRA >gi|227860840|gb|ACLH01000080.1| GENE 5 5005 - 6051 1085 348 aa, chain - ## HITS:1 COG:Cgl1356 KEGG:ns NR:ns ## COG: Cgl1356 COG0016 # Protein_GI_number: 19552606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Corynebacterium glutamicum # 6 348 3 345 345 584 81.0 1e-167 MSDTPQIELTEEALEAAAQKAIAAFEGASDLDELTSARREHLGDGGYIPQARQSLGQLPK DQRKDAGRAVNMARGKVEKRFAQIREVLEQGARAARLKAEKVDVTVPTTRAQTGALHPIT ALSEHIADIFVGMGWEIAEGPEVEAEYFNFDALNFKPDHPARTLQDTFHVGKEGSKQVLR THTSPVQVRTMLERDVPLYIACPGRVFRTDELDATHTPVFHQVEGLAVDKGLTMAHLRGT LEHLAKVLFGPETTTRMRVNYFPFTEPSAEVDVWFPNKKGGAGWIEWGGCGMVNPNVLRA VGIDPEEYTGFAFGMGLERTLQFRNGLTDMRDMVEGDVRFTLPFGVQA >gi|227860840|gb|ACLH01000080.1| GENE 6 6154 - 6954 546 266 aa, chain - ## HITS:1 COG:Cgl1355 KEGG:ns NR:ns ## COG: Cgl1355 COG0566 # Protein_GI_number: 19552605 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 1 262 3 267 273 376 75.0 1e-104 MKLDFENAFTERTPRIINAAKLHRAASRRKAERFLIEGENAVDAAVSTGSATDVFVTEKA AERFAHIVQTCGYMDVYVHPITDKAAKHLSDTATSTGLFAVCRPVLWTAGKILAGKPRLV SVPVLTSEPGNAGTLIRTSDAMGADGVIFAGETVDPLGCKVARASAGSLFHIPVARDPNI KDVLGKLRSSGMQVLATAADGEVDLAEADLSQPTAWLFGNEAHGLGELLDEADMRVRIPI LGRAESLNLATAASICLYESVKQQNR >gi|227860840|gb|ACLH01000080.1| GENE 7 7074 - 7526 680 150 aa, chain - ## HITS:1 COG:no KEGG:cauri_1357 NR:ns ## KEGG: cauri_1357 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 150 1 150 150 206 100.0 3e-52 MTNPNGGFQQNNPNASGNNPQYSNPFDSNGNQYQGGNYGQNLPAQQGGYQGQGQYYSQQA PVNAPQKSWLAALLLAFFLGGFGAHNFYIGRTGRAIGQLSLCVFSILTSWLGIGAISAGI LWIWVIIEFIMIIAGAGGYDRDSNGIPLKK Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:53:11 2011 Seq name: gi|227860839|gb|ACLH01000081.1| Corynebacterium aurimucosum ATCC 700975 contig00162, whole genome shotgun sequence Length of sequence - 71791 bp Number of predicted genes - 68, with homology - 67 Number of transcription units - 29, operones - 17 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 133 - 178 7.4 1 1 Op 1 46/0.000 - CDS 199 - 582 633 ## PROTEIN SUPPORTED gi|227492074|ref|ZP_03922390.1| 50S ribosomal protein L20 2 1 Op 2 36/0.000 - CDS 639 - 833 320 ## PROTEIN SUPPORTED gi|227833183|ref|YP_002834890.1| 50S ribosomal protein L35 3 1 Op 3 . - CDS 870 - 1373 419 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 - Term 1440 - 1475 5.5 4 2 Op 1 . - CDS 1643 - 2554 621 ## cauri_1361 S-adenosylmethionine synthetase (EC:2.5.1.6) 5 2 Op 2 . - CDS 2605 - 5442 3079 ## COG0178 Excinuclease ATPase subunit - Prom 5489 - 5548 2.9 + Prom 5305 - 5364 2.0 6 3 Op 1 1/0.333 + CDS 5507 - 6121 558 ## COG0491 Zn-dependent hydrolases, including glyoxylases 7 3 Op 2 1/0.333 + CDS 6205 - 7140 1243 ## COG2259 Predicted membrane protein + Term 7205 - 7248 10.2 + Prom 7173 - 7232 3.1 8 4 Op 1 . + CDS 7319 - 9559 1812 ## COG3973 Superfamily I DNA and RNA helicases 9 4 Op 2 . + CDS 9570 - 10583 936 ## COG4850 Uncharacterized conserved protein 10 5 Tu 1 3/0.111 - CDS 10669 - 11109 649 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 11151 - 11210 2.8 11 6 Tu 1 1/0.333 - CDS 11249 - 11695 558 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 11721 - 11780 3.2 12 7 Op 1 . - CDS 11806 - 13899 2499 ## COG0556 Helicase subunit of the DNA excision repair complex 13 7 Op 2 . - CDS 13997 - 14359 145 ## cauri_1370 hypothetical protein - Prom 14399 - 14458 3.3 + Prom 14360 - 14419 2.3 14 8 Tu 1 . + CDS 14464 - 15828 1116 ## cauri_1371 putative secreted protein - Term 15609 - 15636 0.1 15 9 Tu 1 . - CDS 15841 - 16443 491 ## COG0237 Dephospho-CoA kinase - Term 16453 - 16496 7.4 16 10 Tu 1 . - CDS 16558 - 18018 2458 ## PROTEIN SUPPORTED gi|227833197|ref|YP_002834904.1| 30S ribosomal protein S1 - Prom 18040 - 18099 1.7 + Prom 17977 - 18036 3.1 17 11 Op 1 . + CDS 18259 - 18999 713 ## COG0500 SAM-dependent methyltransferases 18 11 Op 2 . + CDS 19060 - 19530 559 ## cauri_1375 hypothetical protein 19 12 Tu 1 . - CDS 19534 - 22041 2659 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + TRNA 22277 - 22353 57.5 # Leu CAA 0 0 + Prom 22279 - 22338 80.3 20 13 Op 1 . + CDS 22418 - 22693 432 ## cauri_1377 hypothetical protein + Prom 22701 - 22760 3.3 21 13 Op 2 . + CDS 22829 - 23644 753 ## COG2035 Predicted membrane protein 22 13 Op 3 31/0.000 + CDS 23648 - 24529 1018 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 23 13 Op 4 34/0.000 + CDS 24522 - 25475 1152 ## COG0765 ABC-type amino acid transport system, permease component 24 13 Op 5 . + CDS 25487 - 26239 604 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 26390 - 26435 8.6 - Term 26425 - 26461 1.1 25 14 Op 1 6/0.000 - CDS 26471 - 27001 629 ## COG0781 Transcription termination factor 26 14 Op 2 10/0.000 - CDS 27003 - 27566 948 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 27595 - 27654 1.8 27 14 Op 3 4/0.111 - CDS 27661 - 28752 1353 ## COG0006 Xaa-Pro aminopeptidase 28 14 Op 4 5/0.000 - CDS 28795 - 29220 585 ## COG0757 3-dehydroquinate dehydratase II 29 14 Op 5 20/0.000 - CDS 29239 - 30309 1022 ## COG0337 3-dehydroquinate synthetase 30 14 Op 6 7/0.000 - CDS 30384 - 30893 484 ## COG0703 Shikimate kinase 31 14 Op 7 1/0.333 - CDS 30890 - 32101 1121 ## COG0082 Chorismate synthase 32 14 Op 8 2/0.111 - CDS 32153 - 32545 294 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 33 14 Op 9 4/0.111 - CDS 32605 - 33411 757 ## COG0169 Shikimate 5-dehydrogenase 34 14 Op 10 4/0.111 - CDS 33416 - 34624 1277 ## COG1559 Predicted periplasmic solute-binding protein 35 14 Op 11 9/0.000 - CDS 34614 - 35162 377 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 36 14 Op 12 2/0.111 - CDS 35221 - 37908 3114 ## COG0013 Alanyl-tRNA synthetase 37 14 Op 13 . - CDS 37976 - 39331 904 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 38 14 Op 14 . - CDS 39331 - 40548 1028 ## cauri_1395 hypothetical protein 39 14 Op 15 . - CDS 40615 - 42435 2264 ## COG0173 Aspartyl-tRNA synthetase - Prom 42523 - 42582 1.6 40 15 Tu 1 . + CDS 42640 - 43533 838 ## COG2321 Predicted metalloprotease 41 16 Op 1 . + CDS 43721 - 43852 88 ## 42 16 Op 2 . + CDS 43888 - 45459 1808 ## COG0306 Phosphate/sulphate permeases + Term 45499 - 45546 16.8 43 17 Op 1 . + CDS 45592 - 46335 399 ## cauri_1399 hypothetical protein 44 17 Op 2 4/0.111 + CDS 46359 - 47465 377 ## PROTEIN SUPPORTED gi|15900201|ref|NP_344805.1| hypothetical protein SP_0267 45 17 Op 3 1/0.333 + CDS 47466 - 48143 500 ## COG0431 Predicted flavoprotein 46 17 Op 4 . + CDS 48217 - 49626 1550 ## COG1760 L-serine deaminase + Term 49751 - 49785 5.8 - Term 49552 - 49592 0.3 47 18 Op 1 4/0.111 - CDS 49623 - 50900 1429 ## COG0124 Histidyl-tRNA synthetase 48 18 Op 2 . - CDS 50906 - 51550 578 ## COG0491 Zn-dependent hydrolases, including glyoxylases 49 18 Op 3 . - CDS 51550 - 52047 610 ## COG2077 Peroxiredoxin 50 19 Tu 1 . + CDS 52155 - 53015 1070 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 53040 - 53080 4.0 + Prom 53209 - 53268 2.3 51 20 Op 1 . + CDS 53304 - 53654 622 ## cauri_1407 hypothetical protein 52 20 Op 2 . + CDS 53711 - 53965 528 ## cauri_1408 hypothetical protein + Term 53983 - 54025 9.3 53 21 Op 1 . - CDS 54091 - 54666 557 ## COG2323 Predicted membrane protein - Term 54691 - 54722 4.8 54 21 Op 2 . - CDS 54740 - 56803 2812 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 55 22 Op 1 9/0.000 - CDS 56976 - 59273 1896 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 56 22 Op 2 3/0.111 - CDS 59308 - 59862 646 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 57 22 Op 3 4/0.111 - CDS 59859 - 61361 811 ## COG0747 ABC-type dipeptide transport system, periplasmic component 58 23 Op 1 31/0.000 - CDS 61476 - 62639 1219 ## COG0341 Preprotein translocase subunit SecF 59 23 Op 2 . - CDS 62642 - 64435 1941 ## COG0342 Preprotein translocase subunit SecD - Term 64584 - 64623 -0.6 60 24 Tu 1 . - CDS 64682 - 64945 236 ## cauri_1416 hypothetical protein 61 25 Op 1 29/0.000 - CDS 65054 - 66139 887 ## COG2255 Holliday junction resolvasome, helicase subunit 62 25 Op 2 14/0.000 - CDS 66155 - 66763 501 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 63 25 Op 3 . - CDS 66803 - 67483 503 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Prom 67423 - 67482 1.8 64 26 Tu 1 . + CDS 67655 - 68251 624 ## COG0778 Nitroreductase + Term 68260 - 68295 5.7 65 27 Tu 1 . - CDS 68257 - 69012 967 ## COG0217 Uncharacterized conserved protein - Prom 69054 - 69113 2.9 66 28 Tu 1 . - CDS 69117 - 69983 725 ## COG1946 Acyl-CoA thioesterase 67 29 Op 1 . + CDS 70086 - 70574 342 ## cauri_1423 hypothetical protein 68 29 Op 2 . + CDS 70600 - 71791 530 ## cauri_1424 hypothetical protein Predicted protein(s) >gi|227860839|gb|ACLH01000081.1| GENE 1 199 - 582 633 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227492074|ref|ZP_03922390.1| 50S ribosomal protein L20 [Corynebacterium pseudogenitalium ATCC 33035] # 1 127 1 127 127 248 99 6e-65 MARVKRSVNAKKKRRAILKSAKGYRGQRSRLYRKAKEQWLHSMTYAYRDRRARKSEFRKL WIQRINAAARMNDITYNRLIHGLRLAEIEVDRKILAELAVNDFEAFSALCEAAKAALPED VNAPKAA >gi|227860839|gb|ACLH01000081.1| GENE 2 639 - 833 320 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833183|ref|YP_002834890.1| 50S ribosomal protein L35 [Corynebacterium aurimucosum ATCC 700975] # 1 64 1 64 64 127 100 1e-28 MKQKTHKGTAKRIKVTGSGKLRREQANRRHLLEGKPSKRTRRLKGTEDVAKADTKRVKRL LGRA >gi|227860839|gb|ACLH01000081.1| GENE 3 870 - 1373 419 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 1 164 1 166 166 166 51 4e-40 INERIRVPEVRLVGPGGEQVGIVRTDDARKLAYEADLDLVEVAPNAKPPVAKIMDYGKFK YEQAQKARESRKNQQQTVVKEQKFRPKIDDHDYETKKGNVVRFLEKGSKVKVTIMFRGRE QSRPELGFRLLERLADDVAEVGVVESRPKQDGRNMTMVLGPVRKGKK >gi|227860839|gb|ACLH01000081.1| GENE 4 1643 - 2554 621 303 aa, chain - ## HITS:1 COG:no KEGG:cauri_1361 NR:ns ## KEGG: cauri_1361 # Name: metK1 # Def: S-adenosylmethionine synthetase (EC:2.5.1.6) # Organism: C.aurimucosum # Pathway: not_defined # 3 303 21 321 321 513 100.0 1e-144 MATTLTGCSSPEENIKQPSTEESREGDTPNFDVPTELRAVIADVESEFDVRAGASVADKK DTFNAGLKGDEPAWSTVKVPIAIAALRDGASPELVDLAIKESDNDAAYALWSHVQWTEGD AASAVKALLREYDSTGEFAEPFGYSTWLLEEQAKFGSHLPCIPEAEQVYDAMDDIVEWQD NGLDKLPDTRAKGGWGLSETDNGYTHRQIGVRETAGGGAAENGAVGLAIEVTMPGEYADE AIPALDMLAAGVDRIVSEALEAGALTPLVGCAHPSAPSAVEEASSSTAKKASANTSARGF GSR >gi|227860839|gb|ACLH01000081.1| GENE 5 2605 - 5442 3079 945 aa, chain - ## HITS:1 COG:Cgl1343 KEGG:ns NR:ns ## COG: Cgl1343 COG0178 # Protein_GI_number: 19552593 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Corynebacterium glutamicum # 1 945 1 949 949 1599 83.0 0 MADRLVVRGAREHNLKGVDIDIPRDKLVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS YARMFLGQMDKPDVEFIDGLSPAVSIDQKSTNHNPRSTVGTITEIYDYLRLLFSRAGTAH CPECDAVIERQTPQQIVDEVLSHEEKLKFQVLAPVVRRRKGEFVDLFADLAAQGYSRVRV DGELYQLSDPPKLKKQIKHDIDVVVDRLQVKASQKQRLTDSVETALRLADGLVTLDFVDR EELTHTYSEKAACPNGHTLTIEEYEPRAFSFNAPFGSCPVCDGLGTRLEVDVDLLIPDPD APAVEAIQPWTSSPNARYFVKLVEGLAKALDFDPRTPVSELSKEQRHALIYGTDVEVSVR YKNRYGRQRNWSAPFEGAIGFLERKLDQADSESQKDRLLQYTRRVPCNACGGTRLKPEIL AVRLASTAHGEQSIAGLTALSIEEAAEFLDSLVLGHREEIIAGAVLKEIQARLRFLLDVG LNYLTLDRGASTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIATLKRL RDIGNTLIVVEHDEDTIREADWLVDVGPRAGEFGGTVVYQGEPAGIEAVEESLTGQYLSG KKKLAVPDTRREIDSERMLKVVGARENNLKGIDVEIPLGVLVCVTGVSGSGKSTVVNQIL AKTLANKLNRARQVPGRAKRVEGVEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKIRNLF AETQEAKVRGYKPGRFSFNVKGGRCEACQGDGTIKIEMNFLPDVYVPCEVCDGARYNRET LEVLYKGKNIAEVLDMPISEAAEFFEPITSIHRYLNTLVEVGLGYVRLGQAATTLSGGEA QRVKLASELQKRTNGRTVYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVIIIEHNLDVI KAADWIVDMGPEGGSGGGTVVAQGTPEDVAQVEGSYTGGFLKEMV >gi|227860839|gb|ACLH01000081.1| GENE 6 5507 - 6121 558 204 aa, chain + ## HITS:1 COG:Cgl1341 KEGG:ns NR:ns ## COG: Cgl1341 COG0491 # Protein_GI_number: 19552591 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 5 204 1 200 200 255 68.0 3e-68 MVGLMNNALKLHKISVSEMDNNCYLLCAGDEALLIDASADAPALLALAAEHAVKITAVLT THRHWDHVRALEEVLNKTGAVHYSSFLDSPALPAPVDVELEHGDTLSFAGHDLPVIILRG HTPGGAAIAAEIDGVTNLFVGDSLFPGGVGKTTSEGDFVRLYKDVTQRLFDVYPDEAIVR PGHGAPTTLGAERSHIDEWWERRW >gi|227860839|gb|ACLH01000081.1| GENE 7 6205 - 7140 1243 311 aa, chain + ## HITS:1 COG:Cgl1340_1 KEGG:ns NR:ns ## COG: Cgl1340_1 COG2259 # Protein_GI_number: 19552590 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 5 145 1 142 142 165 59.0 8e-41 MEHVMIRKFARPMLASVFVWDGVDTLRNTSEHVADTESVLKRLRKVLPREYAGYIPNDPE LVTRALGGAKTAAGTTLALGKAPRTSAAVLALTHVPNLVGNAFWTADSKKDKEAQRNSFI TNTALLGALAIVTQDTEGKPSVRWRAAKASERANKKIQQALPGKSEQQKFAEDFSNRANE ISSDVTTKANDWFETAKDYVEDNRDDWESAGRDFIDSARSFVEDKAETAREFFEENKDDW LDAARDNTETARKGLVKAAGKAQDRADEALAKADSLDGKRAQKKAHKRAEKLQKEASKKL DKAFKKFGDRF >gi|227860839|gb|ACLH01000081.1| GENE 8 7319 - 9559 1812 746 aa, chain + ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 24 739 21 754 755 795 63.0 0 MSESSPATHTGKAGAHASEQRAEIASEQAYVDGLFERLDNEVHAANVRLNEVQAAVDPHT PDADALVRRETEYHGLQAKLDRLNVAQLGLVFGRIDIDAPGDNPTPEGLDRRYIGRMGLD AREEDYRTLLLDWRAPMARPFYLATTAHPEGVHVRRHIRTTGRTVTGISDEILEGDNAAE RSDVASESALHHVMQRARTGHMPSIVETIQREQDEIIRDSTRGVMVVEGGPGTGKTAVAL HRVAYLLYTYREQLAATGVLIVGPNSTFLEYISRVLPELGETGVVLSTISSLFPGIEATH AESLLAREIKGSEAMVEILGNAVKGYQRLPEQPRTLEIDRLELTVDPQMVKAARTRARRS RKPHNDAQAAFAEHLIESMAQQMAERIGSDPLGGANLLSRADVDQLHDDLAEEPQVTELI DEFWPHLAPTEVLAELLSSTERIDSAANAYDEETRGALYREDGRAWAASDAALLDELAVL IGMPDPEAERAAEEKEWREQVAEAEDALDILSSSDSTDNDDDMFEAEILSAHDVIDAEHL ARRHEVRDSRTTAQRAREDYTWAYGHVIVDEAQELTPMEWRMIFRRSPSRWMTLVGDTSQ TGAPAGVDDWGETLEPFVGQRFRLHGLSVNYRTPRPITELANQLLQSINPEAMPGIAVRD GVDVIWQDGESDLQPATFQDADGRLRAVITAANVEQIKGLEFDHVTVVNPDDIVAASPQG LHNLYVALTRATQSLTIAGRYAEVFR >gi|227860839|gb|ACLH01000081.1| GENE 9 9570 - 10583 936 337 aa, chain + ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 335 1 342 344 403 55.0 1e-112 MALSDIARKVESTANAYSLKRSARKGWRPSVTGYAGYGNEEFVHVLGRVLMHDPAAEERD TWAQRGYRQFFTIQVTHHEVEVTVGGKTVAGTTNDNGYIDVLVHDHGLEPGWHEVTIRAK GAEEASSEVLIVDKDTTFGVVSDIDDTIMVTWLPRAMIAAWNSWVKRTNTRKPVEGMASF YREISQQHPEAPFIYLSTGAWNTYDTLVNFMAENGFPRGPLLLTDWGPTPTGLFRNGLEH KRVQLRNLFIAFRKLRWLLIGDDGQHDPITYADAAAEHPNHVAAVAIRNLTPQEQLLSHG SLAPLVKVNEQSSFDIPLIQGTDGNALARAYRTLPSS >gi|227860839|gb|ACLH01000081.1| GENE 10 10669 - 11109 649 146 aa, chain - ## HITS:1 COG:Cgl1336 KEGG:ns NR:ns ## COG: Cgl1336 COG0589 # Protein_GI_number: 19552586 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 3 146 4 147 147 177 78.0 5e-45 MSDYNKIVVGTDGSKSSLLAVERAAKIAAAFDATLIIGCAYYENQEQASKTLRQDSVTIL GDEKAQANLASGKEHAEKFGVTKVETAVRPGTPVQALMSIVNDNKADLLIVGNRGINSLT GRLLGSVPADVARQSDCDVMIVHTVN >gi|227860839|gb|ACLH01000081.1| GENE 11 11249 - 11695 558 148 aa, chain - ## HITS:1 COG:MT1672 KEGG:ns NR:ns ## COG: MT1672 COG0589 # Protein_GI_number: 15841091 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 1 147 1 146 146 86 39.0 2e-17 MLSYNVIAVGTDGSQTSMRAVRSAASMARAYDATLIIVSAFYNHSGSMLGAPNSEDARVP VVSEEMSESFLSNAAEIAHGEGAKRIEIIAKSGDPVNSLLEVGKDYDVDMFVVGNKGIHS VRGRVFGSVATELTRKAHADVVVVNTTD >gi|227860839|gb|ACLH01000081.1| GENE 12 11806 - 13899 2499 697 aa, chain - ## HITS:1 COG:Cgl1335 KEGG:ns NR:ns ## COG: Cgl1335 COG0556 # Protein_GI_number: 19552585 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Corynebacterium glutamicum # 1 697 22 720 720 1139 87.0 0 MAFAAEHPILPVSEHRPVGEIERRSAEFRVESEFQPAGDQPAAIAELDERLSRGERDVVL MGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQ PEAYIAQTDTYIEKDSSINEDVERLRHSATSALLSRRDVVVVSSVSCIYGLGTPQSYLDR SVVLEEGEEIDRDRFLRLLVDIQYERNDVGFTRGTFRVKGDTVDIIPAYEERAVRIEFFG DDVDELYYIHPLTGDVLERVDEVRIFPATHYVAGPERMARAIEDIKEELAERLAELENRG KLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHVDGRPAGSAPATLLDYFPEDFLTIID ESHVTVPQIGGMFEGDMARKRNLVEFGFRLPSAVDNRPLTFDEFEERVGQTVYMSATPGD FEMTASGGEFVEQVIRPTGLVDPKVTVKPTKGQIDDLIDEVRARTAKQERVLVTTLTKRM AEDLTDYLLEHGIKVRYLHSDIDTLQRVELLRQLRLGEFDVLVGINLLREGLDLPEVSLV AILDADKEGFLRSTTSLIQTIGRAARNVSGEVIMYADKITDSMQEAIEETERRREKQIAY NKEHGIDPQPLRKKIADILDQVYENADEQGQDADPTAIVDKPDVSSMAADEVQALIDDLT TQMREAARELKFELAGRLRDEIADLKKEQRGLKEAGI >gi|227860839|gb|ACLH01000081.1| GENE 13 13997 - 14359 145 120 aa, chain - ## HITS:1 COG:no KEGG:cauri_1370 NR:ns ## KEGG: cauri_1370 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 120 16 135 135 237 100.0 1e-61 MGTWDVGPFDNHAACEVLAAIRDGSFDLDTFKKSCVDSPIDVDDAGVIIALGALATTPEN RLPAGISADDVKVLRTPQTRAWLRKKINTAMEPNSSLIYALWETTGELELWLRRTRAALP >gi|227860839|gb|ACLH01000081.1| GENE 14 14464 - 15828 1116 454 aa, chain + ## HITS:1 COG:no KEGG:cauri_1371 NR:ns ## KEGG: cauri_1371 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 454 1 454 454 866 100.0 0 MKFRSLASALTIAGLVPVAIVTHSPAAHASPCTAYSRSGSFTSKPETSGSSLGGLEALLG SSSRSSSSDNTEAPQRSNYNQRQISGGPTQIMQLITGAGSPNRTDRKFDISGTDLGIAYS DGAGRSYYVFGDSMDCSSEGDGWRSNLLLRTSDHDYGDGLRLEEALTNSGWSAKGRAKEF IPSQKVGDQDTNGERTTIPTAGIVVDGVHYIDYMSVRSWHDPKTGWSTNFGATMKSTDGG VTWRAVPEATRTNASHGANAPIPGGPNYREGFEKLQQSAFIEHGEYIYRFTTGNGRRGPA YLSRALKSEFPNEDAFSYYSDGSWVKNPARATEVLDGKVSELSVAYNHYLGKYVTMYGVE GEGIVMRTADSPEGPWSPRRMLVSDKTTKVVSGQPLNDTYAPFVLPNQDDQHLYYTLTSW HDYNTMLMRTDLDFVGEDMENNDHIEVSDVVATR >gi|227860839|gb|ACLH01000081.1| GENE 15 15841 - 16443 491 200 aa, chain - ## HITS:1 COG:Cgl1325 KEGG:ns NR:ns ## COG: Cgl1325 COG0237 # Protein_GI_number: 19552575 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Corynebacterium glutamicum # 1 199 1 199 200 201 63.0 6e-52 MKLIGLTGGIGSGKSTVAQLLLRHGWVLVDADHIARDIVEPGQPALTELADAFGEDILQA DGSLDRGLLASRAFASREKTDLLNSITHPRIQEETQARFDSARRAGADFVVYDMPLLVDK GLHKDMDATIVVDVDVEERVRRLVEYRGLDEEDARRRIAAQIPDDVRRAAADFIIDNNGA RDELDAQVDGVVDKLRSRLA >gi|227860839|gb|ACLH01000081.1| GENE 16 16558 - 18018 2458 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833197|ref|YP_002834904.1| 30S ribosomal protein S1 [Corynebacterium aurimucosum ATCC 700975] # 1 486 1 486 486 951 100 0.0 MPTSNTPQVAINDIGTAEDFLAAVDATIKYFNDGDIVEGTVVKVDHDEVLLDIGYKTEGV IPSRELSIKHDVNPDEVVEVGDEIDALVLTKEDKEGRLILSKKRAQYERAWGAVEELHAK EEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLEPYIGQELEAKIIELDKQRNN VVLSRRAYLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSELSW KHIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRVFARTHAVGQIVPGKVT KLVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGQEVMVKVIDIDLERRRISLSV KQADEDYTDEFDPSKYGMADSYDEQGNYVFPEGFDPETNEWLEGYDEQRQAWEARYAESE RRFNLHTAQIERNRAAAAEAAESAANSNYSSESQDAAPASDSQAEVGGSLASDEQLAALR DKLAGN >gi|227860839|gb|ACLH01000081.1| GENE 17 18259 - 18999 713 246 aa, chain + ## HITS:1 COG:Cgl1321 KEGG:ns NR:ns ## COG: Cgl1321 COG0500 # Protein_GI_number: 19552571 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Corynebacterium glutamicum # 9 246 5 258 259 249 52.0 3e-66 MSSAAFSASSANRDFWDRDADSYHAEHPEYLSSFYWCPEMLHEVDVQLLGDVSSATVLEL GCGSAPCTQWLQGRARFATGFDLSSGMLSHAEGGLPLVQADALALPYRDEAFDIAFSAFG ALPFVAGLDQALREVHRVLRPHGRFVFSVPHPMRWVFPDDPQNLTAELSYFERAYLEQDA NGELSYAEFHRTMGDWVRALQVRGSFEIRNLIEPEWPERLDITWGQWSPERGAIFPGTVI FVCEAR >gi|227860839|gb|ACLH01000081.1| GENE 18 19060 - 19530 559 156 aa, chain + ## HITS:1 COG:no KEGG:cauri_1375 NR:ns ## KEGG: cauri_1375 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 156 1 156 156 244 100.0 6e-64 MLLERLGIFVRRTVAWWIDAFLAAAIIVALKWLINFIADGVLSGRAGAVYDIVALALAFY VYRVWVEAATQTSLGKWSLKLEVIAEHPGIGSAAVRNSWLLLTLLALTGLPFVEATILGI LGLSVLLLGQTPFDLLAGCLVERRSPTEDERAVGLA >gi|227860839|gb|ACLH01000081.1| GENE 19 19534 - 22041 2659 835 aa, chain - ## HITS:1 COG:Cgl1317_2 KEGG:ns NR:ns ## COG: Cgl1317_2 COG0749 # Protein_GI_number: 19552567 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Corynebacterium glutamicum # 294 835 21 569 569 747 75.0 0 MLANILAEEKPDFVAVAFDVGRKTFRTDMFPEYKAQREAAPEEFRGQVELIRDVLETLGI TTLSRENFEADDIVATLSTQAGADYQTFLVTGDRDYLQLVDDSTTVLYPMRGVSKLHRFT PEAVKEKYGLSPEQYPDFAALRGDPSDNLPSVPKVGEKTATKWITQYGSLDALIEHAEEI KGVAGQNFRDRIEQVKLNRQLTQMVTDMDLEVGPADLEFKGAVASEVAARFDELEFGTNL RERVLNAVPHDAAAEAAAVEEAPEVSVTVVETPLAEWLKGKEHVAVFVQGDGTPGAGDAA ALALVDSAFEGLQIELADLDAKDDAALAAWLSSDAPKYLHEAKAAWHMLAGRGIELRGIA HDTALAAYLLRPGQRTYALTDVSQRHLQKSLGAATEQLSILDENPLVDQAGAIMELAAEL TAQLQEIDSFELYTDLELPLVSILAQMEAAGIAVDRDVLETQRDAFIEQVNEQERAAREL AGDDSLNLNSPKQLQAVLFDTFDMPKTKKTKTGYSTAAKEIEQLAATHPHPFLDHLLAHR EYQKMKTTLEGLIKTIQPDGRIHTTFNQTVTSTGRLSSTEPNLQNIPVRTEAGRQIRSAF VVGEGYETLITADYSQIEMRVMAHLSADPGLIEAYREGEDLHNYVGSKVFDVPVDEVTPE LRRRVKAMSYGLVYGLSAFGLSQQLGIPAREAKEIMESYFERFGGVKRYLDEVVVQARKD GYTSTVFGRRRYLPELNSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDKALEALAS RVLLQVHDELVVEVAPGEAEDVQRILEREMDKAIELTVPLEVSVGVGKNWDAAAH >gi|227860839|gb|ACLH01000081.1| GENE 20 22418 - 22693 432 91 aa, chain + ## HITS:1 COG:no KEGG:cauri_1377 NR:ns ## KEGG: cauri_1377 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 91 1 91 91 139 100.0 5e-32 MRRTIIALSTAVALTLGGTTVATAAESSADKEVSTKVEGSSYYQELRKSAASSEDPQLNT FYTVLLDGLVGLAAFAILGSIYGEVAKRLPL >gi|227860839|gb|ACLH01000081.1| GENE 21 22829 - 23644 753 271 aa, chain + ## HITS:1 COG:Cgl1302 KEGG:ns NR:ns ## COG: Cgl1302 COG2035 # Protein_GI_number: 19552552 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 4 262 27 309 326 226 51.0 4e-59 MHYLFNAIRGALIGMAELVPGISGGTVALIVGIYERALHNANDLLSGRFKKVEWGFLVSV AVGMFAAVFGFSTILHNFVEGQVSLSSALFLGMVAVSIFVPLSMMSRFSPASIAALVIAA IAIFFVTGFTSTPVEDPNLIVVFLAAMVTVCALVLPGVSGSLILLTMGLYAPIIGAVSDR NMLVVGVFALGAVCGLAAFVKVLNYLLDNHRDITLAAMAGFMLGSLRALWPWGADQDAST PLILLMFAIGGIIVAIFIVVDRRKAASYQES >gi|227860839|gb|ACLH01000081.1| GENE 22 23648 - 24529 1018 293 aa, chain + ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 2 292 36 334 334 352 59.0 4e-97 MIKKTAIVGVVGALASATLSGCVTNEEPALPEGWSEPKVDEVPEIAAMYEDADGVLTVGT NPPFAPFEFKDSDGSLIGLEMDLANAVAQVLGLEFQPVEQDFSMILPAVQSGQIDLGGSG FTDTDERRENFDFVDILYAGIQWAKLTDGPNEVDPSNPCGLTVAVQRTTVSETDDLRPKQ EACDGDLTILPYDTSDNAALAVLMGRADALSADSPVSAWAVNRSDGRMSMVGEMFDAAPY GFAVPKDSDLGPAVAAALQHLIDTGAYAEILDKWGVTDGLVEHAMINERPIND >gi|227860839|gb|ACLH01000081.1| GENE 23 24522 - 25475 1152 317 aa, chain + ## HITS:1 COG:Cgl1299 KEGG:ns NR:ns ## COG: Cgl1299 COG0765 # Protein_GI_number: 19552549 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 14 314 10 311 316 417 73.0 1e-116 MTNSSLPAASDSSASTTLQKIEARPLRHPWRWVFATLLALLAIWFIISSARNEAFGWGTY FQYLFDTRIATAALHTIAITILAMIIGVVGGAALAVMRMSPNPVLGGVSWVFLWLFRGTP IYVQLVFWGLLSALYQSINLGFTEISLTEVLNNAFLLSVLGLGLNEAAYMAEIVRSGISS VPEGQKEASKALGMGWWMTMRRTVLPQAMRIIIPPTGNEFISLLKTSSLVVAIPYTAEIF GRATDISAALFEPIPLLMVAATWYLAITSLLMVGQYFLERRFERGATRELTGRQLAALAD AEGTIPRNVSVIPEVKN >gi|227860839|gb|ACLH01000081.1| GENE 24 25487 - 26239 604 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 249 1 242 245 237 47 1e-61 MISAQNVHKSFGQLEVLKGIDLTVMPGEVTCLLGPSGSGKSTFLRCCNHLEKVTAGRLYI DGELIGFRERNGVLYEISEKEAAAQRQDIGMVFQQFNLFSHRTVLENIIEAPVQVKKQNP EQAKKKAMELLEKVGLAHKADAYPVQLSGGQQQRVAIARSVAMDPKLMLFDEPTSALDPE LVGEVLRVMKELAADGMTMLVVTHEMGFAREVADTIVFMDGGSVIETGTPEQVLENPQHQ RTKDFLSSLL >gi|227860839|gb|ACLH01000081.1| GENE 25 26471 - 27001 629 176 aa, chain - ## HITS:1 COG:Cgl1580 KEGG:ns NR:ns ## COG: Cgl1580 COG0781 # Protein_GI_number: 19552830 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Corynebacterium glutamicum # 1 169 1 175 227 138 50.0 4e-33 MTRPEPNFKRHTARYRARRRAADILFEAESRDVDPVAIVEDRVELARDPENGVAPIADYT REIVSGAAEELDAIDDAIARYLSSEWSLERIPAVDRAIMRVSVWEILFNADVPNATALVE GVELASEYSNDKAAPYIHAVLDDVIQAQSADSPMAPASAEEPAEPAETAETEGDTK >gi|227860839|gb|ACLH01000081.1| GENE 26 27003 - 27566 948 187 aa, chain - ## HITS:1 COG:Cgl1581 KEGG:ns NR:ns ## COG: Cgl1581 COG0231 # Protein_GI_number: 19552831 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Corynebacterium glutamicum # 1 187 1 187 187 311 83.0 6e-85 MADTTDFKNGLVLKIDNKLQQIVEFQHVKPGKGPAFVRTKLKDVVSGKVTDKTFNAGVKV ETANVDRRDMTYLYNDGQNYVVMDDKTYEQYELPFDKFGDAGKFLLENMRVQVSFHDGEA LFGELPISVDLKVEHTEPGLQGDRSNGGTKPATLETGAEIQVPLFIETGNTLKIDTRTGE YLSRVNN >gi|227860839|gb|ACLH01000081.1| GENE 27 27661 - 28752 1353 363 aa, chain - ## HITS:1 COG:Cgl1582 KEGG:ns NR:ns ## COG: Cgl1582 COG0006 # Protein_GI_number: 19552832 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Corynebacterium glutamicum # 1 363 1 363 363 441 67.0 1e-123 MALADTRYGNRRRKLMTELTGQRIDAIIVTHLTHVRYLTGFSGSNGGLLLRKDLSAVMAT DGRYTTQIAEEVPDIEASLGRDVGPHLLGQVSQDLRVGYEADYVTVSQLERLEKAKPEGV TLVPVSGVIEKIRLVKDHVELQKLEEIAALANQALTDLVEAGEVAAGRTERQVAADLEYR MRMLGSERVSFDTIVASGENSAKPHHGADDRELRKGDLVTIDFGAHLRGFNSDCTRTFAI GEATDFAREIYDVVLRAQEAGVKAAVPGAKLVDVDAACRDIITEAGYGEYFVHSTGHGIG LDVHEGPSAAKTGKGELVEGMTLTIEPGIYVPGKGGVRIEDSLFITSGAPKIITAYPKEL QVL >gi|227860839|gb|ACLH01000081.1| GENE 28 28795 - 29220 585 141 aa, chain - ## HITS:1 COG:ML0519 KEGG:ns NR:ns ## COG: ML0519 COG0757 # Protein_GI_number: 15827181 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Mycobacterium leprae # 5 138 6 139 145 142 57.0 2e-34 MTILVLNGPNLNRLGKRQPEIYGSETLQDVETRIRAAAGEEEIVFFQSNHEGELIEQVHR AADERWPVIINPGGFTHTSVALRDALAEVADGAGFVEVHLSNVHAREAFRQHSYLSPIAR GVIAGLGSYGYVAALGYFLAH >gi|227860839|gb|ACLH01000081.1| GENE 29 29239 - 30309 1022 356 aa, chain - ## HITS:1 COG:Cgl1583 KEGG:ns NR:ns ## COG: Cgl1583 COG0337 # Protein_GI_number: 19552833 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Corynebacterium glutamicum # 2 355 8 364 365 425 62.0 1e-119 MHTIAVNGPSPYEVTLGGGLSTAMIKRAAAIGAAKVAIIHQPPLAQAAHALVDQARTQGI EATAVAVPDAEAAKQLDVLAHLWDIFGEAGFSRRDAVIGLGGGAVTDLAGFAAATWMRGI PVIQAPTTLLAMVDAAVGGKTGINTTSGKNLVGAFHEPDSVFVDLDHLRTLPAEEIVAGS AEIIKTGFIHDPQIIEHYLKDPAACLEPDGLLPELIERSIAVKAHVVGQDLKESGLRETL NYGHTFGHAVERRENYSWRHGRAVAVGMMFIAHLSHARGLIDANLVATHRDILTRIGLPT TYEQGHFEELLDAMRHDKKNRGGHIRFVALTGIGETTRLEDTTDEELRAAYAQLTA >gi|227860839|gb|ACLH01000081.1| GENE 30 30384 - 30893 484 169 aa, chain - ## HITS:1 COG:Cgl1584 KEGG:ns NR:ns ## COG: Cgl1584 COG0703 # Protein_GI_number: 19552834 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Corynebacterium glutamicum # 4 167 25 188 190 190 62.0 1e-48 MNSPHVVLVGPPGSGKTTIGRRLSRALNCEVVDSDALIEARYGKACGEVFSELGEPKFRE VEAEVVREALATTGVVSLGGGAVLSESTRALLDSLTVVFLDITPEEGVTRTLGDSNRPVL ESADPLAHYTQLLETRRPLYSEVADLKVRTGVRSPQQVVGDILSFLETL >gi|227860839|gb|ACLH01000081.1| GENE 31 30890 - 32101 1121 403 aa, chain - ## HITS:1 COG:Cgl1585 KEGG:ns NR:ns ## COG: Cgl1585 COG0082 # Protein_GI_number: 19552835 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Corynebacterium glutamicum # 1 400 4 403 410 567 79.0 1e-161 MLRWTTAGESHGQALVALIEHMPAGVPISQDDIALQLSRRRLGYGRGARMKFEADDLTLL SGIRHGLTLGSPIAIMIGNTEWPKWTTIMSPEALDLEDPEVAKAMASGRGAPLTRPRPGH ADFAGMVKFDHSEARPILERSSARETAARVAAATVARNFLRETLGVEVLSHVISIGASAP YKGPHPSFADIEAIDASPVRACDKTAEESMISEIETAKKQGDTLGGIVEVIVEGLPIGLG SHTSGEDRLDAQLAAALMGIQAIKGVEVGDGFAEARRRGSEAHDEMVRTDEGVDRETNRA GGLEGGMTNGQTLRLRAAMKPISTVPRALKTVDMSTGGSATAIHQRSDVCAVPAAGVVAE AMVALVLARAVLEKFGGDSLAETKRNIAAYQEYVAGRLEWGEA >gi|227860839|gb|ACLH01000081.1| GENE 32 32153 - 32545 294 130 aa, chain - ## HITS:1 COG:Cgl1586 KEGG:ns NR:ns ## COG: Cgl1586 COG1989 # Protein_GI_number: 19552836 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Corynebacterium glutamicum # 1 120 1 131 137 62 39.0 2e-10 MGELLFLAWGCALIIYDLRFKRLPNYLTLPAAVLSLCWFSVAGLLWPGLYVVMALLSRAG SIGGGDLKLALPLGIVTAHAAGVSGVALAMMGASLSTVLWGYITRDRTPAHGPGMLIAAG LVVIFSPDTV >gi|227860839|gb|ACLH01000081.1| GENE 33 32605 - 33411 757 268 aa, chain - ## HITS:1 COG:Cgl1591 KEGG:ns NR:ns ## COG: Cgl1591 COG0169 # Protein_GI_number: 19552841 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Corynebacterium glutamicum # 3 265 8 270 276 272 57.0 6e-73 MLRAAVLGSPIAHSLSPVLHNAGYEALNLKEWDYTKHEVTDLSAFLAEVGEEYCGFSVTM PLKFDALAYADIVSERAELIGSANTLVRTPEGWRADNTDTEGVLGALDELLGSSQPSSAL LVGSGGTARPVLWGLAQRGVKDVTVLNRSDRLAELRPLAEALGLTLHAATFEDDLAGLAR AADLLVSTVPSAALEGYLTQLAKAPVFDVIYDPWPTPLTVYAAADGYPTVGGHIMLANQA YSQFEQFTGHTAPRAEMLAALNKALKLP >gi|227860839|gb|ACLH01000081.1| GENE 34 33416 - 34624 1277 402 aa, chain - ## HITS:1 COG:Cgl1592 KEGG:ns NR:ns ## COG: Cgl1592 COG1559 # Protein_GI_number: 19552842 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Corynebacterium glutamicum # 10 391 7 389 389 469 65.0 1e-132 MSRKPSRIGRSMEPQYVKRRQRGMAVLIASLVLIIGGLGYIGFRLLGGGSTLDYEGQGNG VTQLVQVPEGSSMGELAPELAEKNVVKTSEAFSSAANSNPRASQIKPGFYRLQEEMSAKA AVEALLDEANMVDLLDVQGGATLLDVNVLGGDVRFGIYSLISQVSCKEGGCVSAEELEKI AATVDPAELGAPEWALEAVRARGEDPKRLEGLIAPGQYVLDPNMDAQEILTDLITRSTKK YNDTNIVDRAQAIGLKPYELLTAASLVERESPAGEFDKVARVILNRLDEPMRLELDSTVN YGLEDVELATTDEDRHRETPWNTYAKDGLPDSPIASPSEEAIQAMENPAEGNWLFFVTVD DKGTTVFTDNYDEHLANVDDAVRSGILDSQREAVGEQPAEEQ >gi|227860839|gb|ACLH01000081.1| GENE 35 34614 - 35162 377 182 aa, chain - ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 1 171 1 168 182 213 74.0 2e-55 MAVEPDKPGVDDPGPGRRLGLDVGTVRIGVAVSDRDARLAMPVETVRRETGFKDRDKDDI DRLLDLIHEYDAVEVAVGLPRDLKGNGSSSVKHAKEIAFRIRRRLAKDDRMKEPPPVRMV DERLTTVVATSALRASGVSEKRGRSVIDQAAAVEILQSWLDARHFALNGHSPSNVGDEVR EP >gi|227860839|gb|ACLH01000081.1| GENE 36 35221 - 37908 3114 895 aa, chain - ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 894 1 887 888 1320 74.0 0 MKTHEIRERFTQHFVKAGHEAVPSASLILDDPNLLFVNAGMVPFKPYFLGQQNPPFANGT ATSIQKCVRTLDIEEVGITTRHNTFFQMAGNFSFGQYFKEGAITHAWSLLTNSVEDGGLG LDPERLWVTVYLDDDEAADIWHDKIGVPRERIQRLGMEDNYWSMGIPGPCGPCSEIYYDR GPEYGQDGGPVEDDDRYMEIWNLVFMQNERGEGIGKGNFEIIGELPKKNIDTGMGIERVA CILQGVDNVYETDLLRPVIDVAEELTGAKYVPDAPKEDLIRFRVVADHSRTGMMLILDGV TPGNEGRGYILRRLLRRIIRSAKLLGAKGETMERFMNTIMDTMTPSYPEIAENRERILRV ALAEEKAFLKTLESGTKLFDEAVTELKNTSRAATPKVLSGEKAFELHDTYGFPIDLTLEM AQEAGLTVDMEGFDAAMGEQRRRAKADNQAKKHGHADLSLYREWVDNHPTLFTGYETLES EAKVLGLVRDGEKVSEVQAGDTVEVILDQSPLYAEAGGQTADRGRIIAGETLLEVNDVQK IGKKLWVHKATVTAGGLELGNGVTAAVDEQWRHGAVQAHSATHLIHAALRQVLGPTAVQA GSLNRPGYLRFDFNYTDQLTQEQLDEIALVTNQAVDQHFPVNTIETSLDKAKEMGAMALF GENYGSEVRVVEMGGPFSIELCGGTHVKNTAEIGPVSVLGESSVGSGARRIEAYSGLDAF RYYSKETALVEGVSRELKVQTEDLPERIAQLTEKLKAAEKQIAELHKAQLMSQTAEMIST AKTINDFTLVAVKLPKGVNGGDLRTLASDIKNRLGDVAAVVVLASENEGGKMPFIVGATK AANERGVKAGDLVKLVSGYVDGKGGGKPDMAQGSGVNIEGLQAAFDAVRDELEAH >gi|227860839|gb|ACLH01000081.1| GENE 37 37976 - 39331 904 451 aa, chain - ## HITS:1 COG:Cgl1595 KEGG:ns NR:ns ## COG: Cgl1595 COG2256 # Protein_GI_number: 19552845 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Corynebacterium glutamicum # 1 450 1 459 459 567 71.0 1e-161 MGQESLFGDDQSAPRLPGGPDMFATHSGSPLAARMRPQSLDEVVGQKHLLEPGTPLRRLV EGSGEASVILYGPPGTGKTTLASLIASSLGDNFIGLSALDSGVKQVREVITHARRELIEG RRTVLFIDEVHRFSKTQQDALLAAVENRTVLLVAATTENPSFSVVAPLLSRSLLLHLEPL DDASLRSLAERALKSERGLAGRITATEDALDQLVLLAGGDARRTLTYLEAAAEAVPDGGE LTVDILKDNVNRAVVRYDRDGDQHYDVVSAFIKSIRGSDVDAALHYLARMIEAGEDPRFI ARRLIVHASEDIGMADPTALPTAVAAAEAAALIGLPEARIPLAQATIHLATAPKSNSVIN AINAAQADVQAGKSGHVPPHLRDGHYEGAKRLGNAVGYQYPHDDPRGVLAQQYLPETLAD AEYYQPTDHGAEKRVLEYLGRLRDVIRGRRR >gi|227860839|gb|ACLH01000081.1| GENE 38 39331 - 40548 1028 405 aa, chain - ## HITS:1 COG:no KEGG:cauri_1395 NR:ns ## KEGG: cauri_1395 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 6 405 1 400 400 778 100.0 0 MGHESMNSSAADAVVAEASLMISRRYGGEPELSDIQQLTGSGNAVVLRARTTPSAFFPHR SVVIKYNPVTGHTIDDAALLREVVAYQFTTALSEEVRPGPVLLAHDVEKRILVLTDAGDG DTLADTLAHSSDEERGELLRSLGSALGKMHAGTAGREEDYEALLNRQLRRHPEYAEHQAL RDDSLKSSIMIGADILSEAGLEPPEHFRELARSAMQSFSSGRNRAFTPFDLSPDNIIAGT TLTFLDYEWAGFRNVGFDVACVVAGFPQFLFSRPITDSEADVFIQAWQRRIVDVWPQFAD EKTLHELLVACLIGWALSSVTTMYAGGIEGVVALAEGNAEIYRDPRRSLLRRSDQGPFTE DEALIRRDLYETFEALSRFAAQCKNDGCSAVAAFGRAVASRLRES >gi|227860839|gb|ACLH01000081.1| GENE 39 40615 - 42435 2264 606 aa, chain - ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 591 1 591 608 1023 85.0 0 MLRTHLAGELRKEMAGETVTLTGWVARRRDHGGVIFIDLRDRSGVAQVVFRESEVAERAH DLRSEYCVKVTGVVEPRPEGSANANLASGEIEVNVSDLEVLNKSAALPFQIDDPSSSGEV GEETRLKYRYLDLRRERQHEALRLRSAANRAAREVLDSHDFTEIETPTLTRSTPEGARDF LVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEM SFVDQDDVIALAEEIVSALWKLIGYEIKTPIPRMTYADAMKYYGSDKPDLRFDIKIVECT EFFKDTTFRVFQNEYVGAVVMEGGASQPRRQFDAWQEWAKQRGAKGLAYITIAEDGTLGG PVAKNITDAEREGIAEHVGAKPGDAIFFAAGDVKSSRALLGAARGEIAKKLDLIKDGDWA FTWVVDAPLFEPAADATASGDVALGHSKWTAVHHAFTSPKPEYLDSFDENPGEALAYAYD IVCNGNEIGGGSIRIHDQDVQKRVFDVMGIGEEEAQEKFGFLLDAFQFGAPPHGGIAFGW DRIVSLLGGFDSIRDVIAFPKSGGGVDPLTDAPGTIPAEQRKETGVDFKPEKAAKAAQGE KAGKES >gi|227860839|gb|ACLH01000081.1| GENE 40 42640 - 43533 838 297 aa, chain + ## HITS:1 COG:Cgl1598 KEGG:ns NR:ns ## COG: Cgl1598 COG2321 # Protein_GI_number: 19552848 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Corynebacterium glutamicum # 58 295 60 298 301 311 64.0 1e-84 MTFKSGANFDGKRASSGGGGRGGMIATGGGIGSLLLIGLYLLLGGDPGAITGSDPQTDQT QVGPEESGEDAFAHCQTAEDGNKYDDCRVMFAAQSVDKVWARELPEQAGIDYVEPGRVIF NNTTMSGCGQASGATGPFYCPADESAYFDTAFFDQLRNFGGENAPLAQMYIVAHEFGHHI QKLEGTLSLSNYNEPGEDSNAVKVELQADCYAGLWAHYADEGEDALLETITEQQVTDAVN TARAVGDDNIQRRSGGEVRPDMWTHGSSEDRAQAFLAGYNTGKMEQCDTLGRGVYKS >gi|227860839|gb|ACLH01000081.1| GENE 41 43721 - 43852 88 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRDAITLHRDRHIIPCFHGASALPAAARAPSSRNVLFMKGTTF >gi|227860839|gb|ACLH01000081.1| GENE 42 43888 - 45459 1808 523 aa, chain + ## HITS:1 COG:MT2339 KEGG:ns NR:ns ## COG: MT2339 COG0306 # Protein_GI_number: 15841772 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Mycobacterium tuberculosis CDC1551 # 7 523 35 552 552 582 61.0 1e-166 MNGKNKDWIWHLFFGAITAVTLIFFIIWSNGEVAEGANRVVLVTAIIFAVFMAFNIGGND VANSFGTSVGAGTLSMKQALAVAAVFEVSGAILAGGEVTDTVRSGIVDLEAIDGLDPMEF VYIMMASLLGAAIWLLVATRMGWPVSTTHSIVGGIVGAALTVGFITGKGGMDMVQWGGIG TIAFSWVLSPVLGGVAAFLLFKWIKTSILVYNDAADERLREIKVRRAALRKEHKTRFERM NELQQISYTNAMARDAALTAEDDYDPEALESDYYRDLHNLNKDLEDINAHRALENWVPLL AALGAIIISAMMLFKGLKNTGVDFSTLETFLVMGMIGAVVWMAVFIFARSLKKKSLSRST FLLFSWMQVFTASAFAFSHGSNDIANAIGPFAAVFDVLQTNQISDEVTVPLPVMVAMGIA LISGLWFIGRFVIQTVGSGLTQMHPSSGFAAELAAAAVVMAASLLGLPVSSTHILIGAVL GVGIVNRAANWKLMKPIALAWVITLPAAAAIAAVTVSILRVAF >gi|227860839|gb|ACLH01000081.1| GENE 43 45592 - 46335 399 247 aa, chain + ## HITS:1 COG:no KEGG:cauri_1399 NR:ns ## KEGG: cauri_1399 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 247 1 247 247 489 100.0 1e-137 MSDNSLARFFSAFNDIEQFLRQAIGAKNSDSFWWIVDRAHDKHLLGKRQAEQLKDFGNLR NAIAHGRYFDGAPIATPHPQVITQLENLQRLLTDPPTAQSLLSGRDVTILAPDTPIMEAL RLINQTGYSQIPIYDSGAYQALLTTNVIARWIAADLGDDGVVNAASISAVLEFAEKKDRA EFLPRTASAQEVIDALTEPTTDGVHASAVLLTEHGKPSQRPLAIATPGISQYWSTPSSGN NLLVHYC >gi|227860839|gb|ACLH01000081.1| GENE 44 46359 - 47465 377 368 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900201|ref|NP_344805.1| hypothetical protein SP_0267 [Streptococcus pneumoniae TIGR4] # 1 335 2 344 349 149 28 3e-35 MQFGVFSIGDVTQDPTTGRTPTEAERIRAMTEIALKAEEVGLDVFATGEHHNPPFVPSAP TTHLAYIAAQTKNLQLSTATTLITTNDPVRLAEDYAFLQHLADGRIDLMLGRGNTGPVYP WFGKDIREGIPLAVENYHLLRRLWREPVVSWQGKFRTPVQGFTATPAPLDGIPPFVWHGS IRSPQIAEQAAYYGDGFFHNNIFWNKEHTAKMVNLYRNRYESYGHGRADQAIVGLGGHVF IGSTEQEAKDFFRPYFDNAPVYGHGPSLEEFTAQTPLTVGTVEQVVERTLQFADWVGDYQ RQLFLIDHAGLPQEVVLEQIEILGTQVVPELRRRFEERRPDHVPSNPPTHATLGSYAPHA LVSPGEEK >gi|227860839|gb|ACLH01000081.1| GENE 45 47466 - 48143 500 225 aa, chain + ## HITS:1 COG:Cgl1606 KEGG:ns NR:ns ## COG: Cgl1606 COG0431 # Protein_GI_number: 19552856 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Corynebacterium glutamicum # 64 189 3 128 165 149 61.0 5e-36 MRSLVLVTAGLSSPSSTRALGDALSSATTTHVTARGESVDITVVELRELAGELAEAMTNW VSPTPRLNAAQSAVLNADGLIAVSPVFQGSYSGLFKMFFDTLEPHSLEGLPTLIAATGGS SRHALVLDYALRPLLNYLHATVVPTGVFQATEDFGTAEGARNEKRIERAAGELADLMVRP VDRVAGLTGPLSETQEAPQDSSENILDSDPAGFRALLSRHDGQPN >gi|227860839|gb|ACLH01000081.1| GENE 46 48217 - 49626 1550 469 aa, chain + ## HITS:1 COG:Cgl1607 KEGG:ns NR:ns ## COG: Cgl1607 COG1760 # Protein_GI_number: 19552857 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Corynebacterium glutamicum # 1 469 1 449 449 505 60.0 1e-143 MTISVTDIFSIGIGPSSSHTVGPMRAAKAFLETLDEHPAKVHVVLRGSLSATGRGHATDR AVILGLAGWDPLSVPLDAEPRADAFIPSEGSISGPAGDVQYSIEFNNEPVPEHPNCLIFT AWDEGGSILAENAEYFSVGGGFILSREEFNAQLQTDSGVPAGVAAATAEDTVPYEFQSGE HLLHLCAANDMAIWEIVAANEAVLHREEGGLDYVYQHLDLVWDIMRECVTEGISTKGILP GGLRVNRRAPQMYQQLLAKQDDESCGFSAMEWVNLYALAVNEQNAAGGRVITAPTNGACG IIPAVLHYARDFMADFTRADARRYLLTAGAVGIIIKSNASISGAEVGCQGEVGSASSMAA AGMAELLGATPEQVENAAEIALEHNLGLTCDPVGGLVQIPCIERNAIGAVKSINAARLAR MGEGTHHVTLDNAVRTMAETGRDMLSKYKETSLGGLAKTMGFTVSQVEC >gi|227860839|gb|ACLH01000081.1| GENE 47 49623 - 50900 1429 425 aa, chain - ## HITS:1 COG:Cgl1609 KEGG:ns NR:ns ## COG: Cgl1609 COG0124 # Protein_GI_number: 19552859 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 2 422 6 425 429 659 80.0 0 MSDKKQFKALSAPKGVPDYVPPQSAIFAKVREAFVHQAHLSGFQHIELPVFEDTSLFARG VGESTDVVSKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRGQLPVKLNYFGPFFRY ERPQAGRYRQLQQVGVEAIGVDDPALDAEIIALADRSYRSLGLSQFRLELTSLGDHDCRP AYREKLQEFLFKLDLDEETKARAELNPLRVLDDKRPEVQEQLVDAPLMLDHLNAECREHF ETVTGLLDDMGVPYTINPRMVRGLDYYTKTCFEFVHDGLGAQSGIGGGGRYDGLMAQLGG QELSGIGYGLGVDRTVLALEAEGVELEGVDERVAVYGVALGAAAKQKMVSIINDLRKAGI SADMSFGDRGLKGAMKGADRANARFALVLGDQELEAGSVALKDLRAHEQHDVPVGDIVNQ LRQLV >gi|227860839|gb|ACLH01000081.1| GENE 48 50906 - 51550 578 214 aa, chain - ## HITS:1 COG:Cgl1610 KEGG:ns NR:ns ## COG: Cgl1610 COG0491 # Protein_GI_number: 19552860 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Corynebacterium glutamicum # 5 209 2 212 213 222 56.0 3e-58 MSAPEIYGFAAGPYKTNTYVVANGSRAFIVDPGMHTREKLEQLAREKSLEFEAVVLTHGH IDHTRDAAEFDLPVYIHPDDAFMLVDGSGVSPESQMLFAAASMKQVADRRDLIGGETLSL VGLEFDLLHAPGHSPGCVILVAEGIALTGDVLFKGSIGRTDLPHSDHAAMQRSLRGPVWG LDDSLAILPGHGPTTTMRRERATNPFLRAAGDVL >gi|227860839|gb|ACLH01000081.1| GENE 49 51550 - 52047 610 165 aa, chain - ## HITS:1 COG:Cgl1062 KEGG:ns NR:ns ## COG: Cgl1062 COG2077 # Protein_GI_number: 19552312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 1 164 4 167 168 204 64.0 7e-53 MATTNFQNKPVETNAELPKVGDALPDFTLVGTDLAELTNADFAGKRLVVSCFPSVDTGVC AAQLRKFNEEAAGLENTVVLSVSRDLPFAQERFCAAEGIENVVSASDFRSDFADKLGLVL EGSPLKGLFARAVIVTDEDHKVTYTELVPEVTTEPDYDAALAALK >gi|227860839|gb|ACLH01000081.1| GENE 50 52155 - 53015 1070 286 aa, chain + ## HITS:1 COG:Cgl1611 KEGG:ns NR:ns ## COG: Cgl1611 COG0652 # Protein_GI_number: 19552861 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 1 284 1 279 280 308 57.0 7e-84 MSTNSQRLDDALNQLDRELKSRDRKQKSRPLGVVLMAAVVIITLVGGIWFLSTRSSEEEE IQAEESSAANTTTEAPTAEALSGKRAKPLGETVTCEYPESGDASREVPTPQGKDIPAKGE VTVNFATKQGDIEMTLDRSLAPCTVNAITDMISAKYYDDTVCHRMTDGGIFVLQCGDPSG KGSGGPDFQFANEYPTDEADDAAMAQPALYPKGSIAMANAGEDTNGSQFFINYKDSELPP AYTYFGNLTEKGQKTIDAIAAKGVKDGQSDGEPAEEVRITKATIES >gi|227860839|gb|ACLH01000081.1| GENE 51 53304 - 53654 622 116 aa, chain + ## HITS:1 COG:no KEGG:cauri_1407 NR:ns ## KEGG: cauri_1407 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 116 1 116 116 88 100.0 7e-17 MKLFSRKALVAAATAATVSLSGVTVATAETTTDDAPVVNDTTTTDNGGNDKDKDKDKDKD KDKDKESSSSSSSNDSKGSSISDMSPKEIRDWIAVFTAIIGALGTVFAFYNKNFAK >gi|227860839|gb|ACLH01000081.1| GENE 52 53711 - 53965 528 84 aa, chain + ## HITS:1 COG:no KEGG:cauri_1408 NR:ns ## KEGG: cauri_1408 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 84 1 84 84 118 100.0 6e-26 MKFFSRKSIVAAATAATIAFSGTAVASAAPVEDDSSSKAFFALSSDDEGNISPKEIREWI KVFTSIIGAMNDAMRLGDKIAGTK >gi|227860839|gb|ACLH01000081.1| GENE 53 54091 - 54666 557 191 aa, chain - ## HITS:1 COG:BH2297 KEGG:ns NR:ns ## COG: BH2297 COG2323 # Protein_GI_number: 15614860 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 26 168 17 160 232 64 31.0 1e-10 MDTLRLFGREAMYQLGIEPHRIPLVMLATLGIYLAFMVLVKLFGSRVLTSITASDAVIII MFGAVSGRVIVGNPPTLAAGIIGLFTLMLLEAAFGTFRQLVTWSRFIDRKPVLLVYKGQL QEDNMSFAHITERDINSAVRKVGLGRRSDVQLMILEPTGQISVIRRGQLVDASVFKDVLG AERIEEVDEQN >gi|227860839|gb|ACLH01000081.1| GENE 54 54740 - 56803 2812 687 aa, chain - ## HITS:1 COG:Cgl0328 KEGG:ns NR:ns ## COG: Cgl0328 COG0737 # Protein_GI_number: 19551578 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Corynebacterium glutamicum # 24 634 25 655 694 370 41.0 1e-102 MNFRRFGQLLAATTVTAVAVSGAPAFAAEADQVTFSVTNFTDFHGHLEPATDRSGNPSEL GAARMAALIKHVNEDQEYALTSSGDNVGGSPFVSAISGDKYTTQALNAMDLAATAVGNHE FDKGTEDLTGRITNESEFPILGANVIKDGKPLLDASAVREIDGVKVGFVGTVTENTKYKV SAASIPGVEFTDPVEATNKEASRLKKSGEADVVVALFHEDAQGFAEGFNKDVDILFGGDT HQKTMGEVEREGALPLQWAQGHEYGKLLNDADITFDKAEKKITKIELKQYTAADAAELAD DPAVADIVAQAKAESDEEGNKVAAITEQAMFRGSDEGGEPGSNRGVESTLNNYIADGQRY ALSQQIGKDIDLGIMNAGGVRADLKAGDVTYKDIFAVQPFGNQVITGTVSGQEFINALEN QWQPGNERARLAMGLSNNVTVVYDQKAEQGKRVKAVTINGEPLDPKKDYTVAMSSFLAPS ATEKGGDGYFNAGALKDRNDVGYMDTQAMIDYIKSDKAEVRTGQSQIGVHIKGDVKPGNE ITIDLSSLNYSNAEEPQAKKVSVALGNAKAEADIDNSAQEGDKGFGERGRATVKLTIPEG QTGEQNLVITTDAGTEAVLPLSLGGNDGSQDGGSAKYAGSSIGLSVGIVAAIAAAVAAAI GAINMPVAALPAPVQQMIEQLRKQFNI >gi|227860839|gb|ACLH01000081.1| GENE 55 56976 - 59273 1896 765 aa, chain - ## HITS:1 COG:Cgl1614 KEGG:ns NR:ns ## COG: Cgl1614 COG0317 # Protein_GI_number: 19552864 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Corynebacterium glutamicum # 16 765 14 758 760 1249 81.0 0 MTTEKQDKTAWRPGSVRGMSARLARSLTGGRVKINPALDPLMSIHREFHPKADAELLNNA YTTAQHLHEGVFRKSGEPYITHPLAVATIAAEIGMDTTTVAAALLHDTVEDTDYSLEDLT RDFGPEVARLVDGVTKLDKVALGAAAEAETIRKMIVAMATDPRVLVIKVCDRLHNMRTMR FLPPEKQAKKARQTLDVIAPLAHRLGMASVKWELEDLAFAILYPKKYDEIVRMVADRAPS RDRALKEIKAQVGQALKANGIEAEIMGRPKHYWSIYQKMIVRGRDFAEIFDLVGIRILVD DINSCYAAIGVVHSLYQALPGRFKDYISSPRFGVYQSLHTTVIGAGGSTLEVQVRTHEMH YNAEFGVAAHWRYKETKGKNSGHQEEVDQMAWMRQLLDWQKEAADPNEFLDSLRYDLTAK QIFAFTPKGDVVNLPAGSTPVDFAYAVHTEVGHRCIGAKVNGKLVALESELKSGDKVEIF TSKDLNAGPSRDWQEFLVSPRAKTKVRQWFAKERREEHLEAGRDALAAEVQRGGLPMHRL FTASSMKQVAEQLHYPDVDALYTAIGAGHVSAQHVANQLMALFGDQDDAVDALASRTPLS ELENSRAQHTKDSAAGTGILVEGSPDVMAKLAKCCQPVPGDAIFGFVTRGGGVSVHRADC TNAEKLKSEPERMMQVEWAGGPKSSGAFAATLQLEAIDRQGLLFELTRIFSEQSLNVLSM TSNRGDDHIATVRFSFSVSDTKQLGQLMTTLRNTEGVFDVYRVTA >gi|227860839|gb|ACLH01000081.1| GENE 56 59308 - 59862 646 184 aa, chain - ## HITS:1 COG:Cgl1615 KEGG:ns NR:ns ## COG: Cgl1615 COG0503 # Protein_GI_number: 19552865 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Corynebacterium glutamicum # 8 177 12 181 185 217 70.0 1e-56 MSEIYVAAAQALKDKVRLVQDFPEEGILFEDLTPVLADADSFTAVVDGLAEACKELGADM IGGLDARGFLLGSAVAYKLGLGILAIRKKGKLPPPVLTQEYELEYGTAALEIPNSGIDIK GKRIVLVDDVLATGGTLHGATLLLESAGAEVVGNVVVLEVQGLEGRERLKGSPLIVLNQM GSKD >gi|227860839|gb|ACLH01000081.1| GENE 57 59859 - 61361 811 500 aa, chain - ## HITS:1 COG:Cgl1616 KEGG:ns NR:ns ## COG: Cgl1616 COG0747 # Protein_GI_number: 19552866 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 4 487 42 529 533 356 43.0 6e-98 MLADAPIATSNAATAWGDAVGAAQLASRVFPALYVPGPAGQMVPNSDLADAEFFPAEGEN AGAHVDFTLTEQARFADGEPVTCDDYLLAFTAGQLSETFGSHLPLMEEVAEVECAPHSKK FTVWFTPDAGSRWRYLFGPGSVVPAHVLAKRAEMSIDDLNAALHSQDVATLQPVAEAWRY GFSTEPGRFDPELQVSFGPYKIERVEDDGGIVLTTNENYYGDKPTLREILMLPRSADAAA FLASDELRVAEAATASPSWFDRDTEGKSVEETSLAGSLTDTLVFSEAGALSQPWARAAFA ACVDAQRLAQVSSKESGVDVPAVTVRTVRNDDPVAAQMSSLTTVPLDNATASGLSGYTIG VGYLAPNPRYKAMVEELRAACEPAGITVEDRSGERVSRAQLAADPATGLPEIDVYLGAVD PMREHSAPSSSVKHAAALRNLEQELWEELPSIPIAAQPRTFIVDRAVTGVVPYTGLAGIG WNLDRWSYNPTTATETKEES >gi|227860839|gb|ACLH01000081.1| GENE 58 61476 - 62639 1219 387 aa, chain - ## HITS:1 COG:Cgl1617 KEGG:ns NR:ns ## COG: Cgl1617 COG0341 # Protein_GI_number: 19552867 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Corynebacterium glutamicum # 8 387 18 402 403 421 58.0 1e-117 MAVETTNRKISRFDRLYVDGSGFDFVGRAKTWYTIAGVLLIASILAIVLRGFNLSLDFEG GTKLNMPAGDLSTEQVEETFTEATGVTPELVQIVGAGSSETLEITSERLSQDEVNQARQA IFETYQVKDDNGKPSPDAIGSSTVSESWGSSITQRMVVAMAVFLVLATIYVAVRLQRDMA FAAILALIFDGVFIAGIYALFGFEVSPAVIIGLLTVLTFSLYDSVIVFDKVDENTTGLEG QRKKTYAELTNLAVNQTVMRSISTSVISALPIIALFIVAVWLMGIGTLRDLALVQFIGVI EGVFSSIFLATTLLVTLSNQRKSVKKHNEVVAAYRAEGGSAEAEDEGAPKATRTVASPAA ASAPAATQTESGPRSDESGGASWRPGR >gi|227860839|gb|ACLH01000081.1| GENE 59 62642 - 64435 1941 597 aa, chain - ## HITS:1 COG:Cgl1618 KEGG:ns NR:ns ## COG: Cgl1618 COG0342 # Protein_GI_number: 19552868 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Corynebacterium glutamicum # 3 584 1 577 616 664 64.0 0 MALFALIVIVVYALIFLTGDKSPTPKLGIDLQGGTRVTLVPQGEDPTQEQLQQARTILEQ RVNGMGVSGSEVVISGSSLVITVPGEDASQAQAVGQTSQLLFRPVGEQPMPDMDTLEKTM TDMANRWVKYGVVTPEHANQSLASIHEALNQSAGAAQGGDQKDKEKDDNSPAPTVSEKPL PDPANSLEETERRDKVTEVLLKDRQSEDPTVQTAALGLMTCDAESDPLAGTDDPAKPLVA CDYSNQQPYILNPAPLLDGIDDPNGTRLTGNEIDNNAPIQGGLNSQTGQMEINFAFKTGD GPNGSQTWATLTQEYLQKQVAITLDSAVISAPVIQGATPVGSATSITGDFTQEEAQNLAN NLRYGALPLSFTGANGEPGGTVETVPPSLGKAALEAALIAGIVGLILVSLYSIYYFRALS SVALLVLIATCVLLYGALVLLGRWIGYSLDLSGMAGLVIGIGATADSFVVYYERMKDELL SGRTFRSATRTGWERSRATIVTGKAVTLIGSVVVYFLSIGAVKGFAFTMGLTTIFDLVVS FLIMAPLMQLLGSRPAFAKPSMNGLGGIYNLVEERRERGFYAKPAKKPVATATDEEK >gi|227860839|gb|ACLH01000081.1| GENE 60 64682 - 64945 236 87 aa, chain - ## HITS:1 COG:no KEGG:cauri_1416 NR:ns ## KEGG: cauri_1416 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: Protein export [PATH:car03060]; Bacterial secretion system [PATH:car03070] # 1 87 24 110 110 134 100.0 1e-30 MRAQRKRQAQMQKLQSSLQAGQEVITAGGLHGTVVEARGEQVDLQVKDGTVMTFDTMAIV RSADAASANTNVPVEAEDESDERFPKL >gi|227860839|gb|ACLH01000081.1| GENE 61 65054 - 66139 887 361 aa, chain - ## HITS:1 COG:Cgl1620 KEGG:ns NR:ns ## COG: Cgl1620 COG2255 # Protein_GI_number: 19552870 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Corynebacterium glutamicum # 1 357 1 361 363 557 82.0 1e-158 MSDVERTEFKLPEGMDLSSPPQRNQDVDAAEQQGEHDIERSLRPKSLDEFIGQPKVREQL SLVLNGAKNRGVTPDHVLLSGPPGLGKTTMAMIIAQELGSSLRMTSGPALERAGDLAAML SNLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGAT TRAGMLTGPLRDRFGFTAQMEYYDTEDLTRVISRAARILEVDIDQDAAVEIGSRSRGTPR IANRLLRRVRDYAEVNGDGHIDVAAAQAALRVFDVDERGLDRLDRAVLGALIKGHGGGPV GVNTLAIAVGEEPSTVEEVCEPYLVRAGMISRTGRGRVATAAAWQHLGLEAPEGAIGGTL F >gi|227860839|gb|ACLH01000081.1| GENE 62 66155 - 66763 501 202 aa, chain - ## HITS:1 COG:Cgl1621 KEGG:ns NR:ns ## COG: Cgl1621 COG0632 # Protein_GI_number: 19552871 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Corynebacterium glutamicum # 1 201 1 206 206 176 54.0 3e-44 MIASLRGTVLDIQLDHAVLECAGVGYKVLATPAMLGTLQRGEEARVMTTLVVKEDSMTLY GFTSQDDRDMFHVLQTVSGLGPKLALAALSVMSAGDLAQAIAGEEAARLQKIPGVGKRVA QRLILELKDKVKAFAPAESADLSSAAPAAAGPVVEDVVEALIGLGFTDKMARPVVESVVA EQPDAATPVVLRAALSQLGAKK >gi|227860839|gb|ACLH01000081.1| GENE 63 66803 - 67483 503 226 aa, chain - ## HITS:1 COG:Cgl1622 KEGG:ns NR:ns ## COG: Cgl1622 COG0817 # Protein_GI_number: 19552872 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Corynebacterium glutamicum # 32 187 1 156 213 238 83.0 1e-62 MCTLFLDKRAHYKGACDKGEEAAVNLEGLRVMGIDPGLTRCGLSVVQAGRGRGVIPIAVG VVRTPSDKDLGERLKLLSVAVREWMDDYKPDVVALERVFERGQVSTVMQTAHAVGVLVLA AAERDIPVHMYTPSEVKKAISGNGRADKKQMTAMITRILGLSEAPKPADAADALALAVCH CWRAPALAWMTGGDASAGVGAGARTSGVRGTSPRTASVSRAAKTTS >gi|227860839|gb|ACLH01000081.1| GENE 64 67655 - 68251 624 198 aa, chain + ## HITS:1 COG:CC0324 KEGG:ns NR:ns ## COG: CC0324 COG0778 # Protein_GI_number: 16124579 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Caulobacter vibrioides # 1 192 29 220 220 81 32.0 1e-15 MLIDAQSAPSNSNTQPWNVHLVGGTALQELSAALIAEFDKNGINPDFTIDYGQGVHPQRS QQLAAKMYGLLGIAREDKEARTEFIRENLRFFGAPHTALLFIPPMGDRIRAAFDQGTYAE NFLLSLEAHGYHGVPQGMISLLAPTVREFLGVDEEHKLVTALTFGVADQSSPVFKTAPGR APLLETVTAHGLEGLKLD >gi|227860839|gb|ACLH01000081.1| GENE 65 68257 - 69012 967 251 aa, chain - ## HITS:1 COG:Cgl1623 KEGG:ns NR:ns ## COG: Cgl1623 COG0217 # Protein_GI_number: 19552873 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 251 1 251 251 388 85.0 1e-108 MAGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPAANPTLDDMIKKAKKAS VPNDNIERARKRGSGEEAGGADWETVMYEGYGPNGVAMLIECLTDNRNRAATDVRTAMTK NGGNLGESGSVAYMFSRTGLVMVEKGELSEDDILIAVLEAGAEEVNDNGEKFEITCAPGD VPAVREALVAADIEVDDTDTDFRASVEVPLQADDARKIFRLIDALEDSDDVQNVYTNMDL SEEVLAELGED >gi|227860839|gb|ACLH01000081.1| GENE 66 69117 - 69983 725 288 aa, chain - ## HITS:1 COG:Cgl1624 KEGG:ns NR:ns ## COG: Cgl1624 COG1946 # Protein_GI_number: 19552874 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Corynebacterium glutamicum # 1 273 1 271 282 247 47.0 2e-65 MASVAQAVDIERIGEDEFRGPVVSSRITRTFGGQTMAQALRAAQLTVDEKLAHSMHCYFV GPGDSSAPTTIQVERIRDGRSFAHRHVRVFQNDRLIFMLSAGFHATGDIGPEHQAAMPQV PPPESIKDSPYYTRIILKEWEDWDVRLIPDAERDAVAAETTGAGFRNIWFRNTGDLLGAT SDQSLHQAALLYMSDMTLIRTALLPHQGERIQLASLDHSLWFLRPVRVDEWMLYSQSSPS AQTGTGLAQGKIFNQRGELLAVAMQEGLTRTLYPESEGSSANGNWQNV >gi|227860839|gb|ACLH01000081.1| GENE 67 70086 - 70574 342 162 aa, chain + ## HITS:1 COG:no KEGG:cauri_1423 NR:ns ## KEGG: cauri_1423 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 162 1 162 162 300 100.0 2e-80 MTSTTPHSVHRVAAYLEMFTWGLLIFSMILKYSGTTEALTPIAGGIHGFGFLCFLLMTAL VWINNRWSLGVGILGLVVTVIPFAALPFAVWVSQRGLVAGPWRFSNDDDAEPHGVFDTIL AQAIRHPVRTALIALLVVAVVFSVLLMLGPPVDVESAIENNR >gi|227860839|gb|ACLH01000081.1| GENE 68 70600 - 71791 530 397 aa, chain + ## HITS:1 COG:no KEGG:cauri_1424 NR:ns ## KEGG: cauri_1424 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 397 1 397 404 699 100.0 0 MLARLFLIYLLLNEKGPLGDVRYYLEGVYGANPSDMTEYPQVGTWPSVLLAWLTGYDFER YAIGFTAMMLLADATFLALLLRHHRSTPGAYSAGWFWVFFGTAAGHVFTWRLDLYPALLV AGAGALLATRPRLASVLLAWATAAKLWPGVLAAGLVGRATSRATWQRLAAFFGCLVALCI GVAAMTSVDRVLSPLTYQGERGLQIESLAATWFVYQAHRQPDVWTMGYAASKSYEISGPG VDTAVALSSIAMGAALVWIIGVALVHFLRGNWSPHSTLVFFIAAILLLIATNKVFSPQYI VWLGPILAVALRSPTPTAANTPRKAAADIRGVRAIMAVLAVGTAALGTVIYPYGYNYIWF YVGENPNPVYALVLRNLLIVAMTAFAVYWHLLEYRVA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:54:13 2011 Seq name: gi|227860838|gb|ACLH01000082.1| Corynebacterium aurimucosum ATCC 700975 contig00163, whole genome shotgun sequence Length of sequence - 28776 bp Number of predicted genes - 29, with homology - 27 Number of transcription units - 12, operones - 6 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 39 - 497 447 ## cauri_1427 hypothetical protein 2 1 Op 2 4/0.000 - CDS 498 - 1598 822 ## COG0438 Glycosyltransferase 3 1 Op 3 3/0.333 - CDS 1617 - 2519 556 ## COG1560 Lauroyl/myristoyl acyltransferase 4 1 Op 4 3/0.333 - CDS 2585 - 3220 875 ## COG0558 Phosphatidylglycerophosphate synthase 5 1 Op 5 4/0.000 - CDS 3213 - 3791 571 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 6 1 Op 6 . - CDS 3837 - 5900 2666 ## COG0441 Threonyl-tRNA synthetase 7 1 Op 7 . - CDS 5994 - 7277 854 ## COG2837 Predicted iron-dependent peroxidase 8 1 Op 8 1/0.667 - CDS 7344 - 8036 724 ## COG2847 Uncharacterized protein conserved in bacteria 9 1 Op 9 . - CDS 8113 - 8700 620 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC - Term 8834 - 8869 0.3 10 2 Tu 1 . - CDS 8890 - 10749 1147 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain - Prom 10948 - 11007 2.1 - TRNA 11126 - 11201 94.3 # Gly GCC 0 0 - TRNA 11243 - 11317 74.4 # Val GAC 0 0 - TRNA 11347 - 11420 65.6 # Cys GCA 0 0 - TRNA 11452 - 11527 94.3 # Gly GCC 0 0 - TRNA 11563 - 11637 81.1 # Val GAC 0 0 11 3 Tu 1 . + CDS 11565 - 11861 117 ## - TRNA 11696 - 11771 94.3 # Gly GCC 0 0 + TRNA 12114 - 12188 80.2 # Val CAC 0 0 12 4 Op 1 . + CDS 12502 - 13347 404 ## COG1275 Tellurite resistance protein and related permeases 13 4 Op 2 . + CDS 13414 - 14064 589 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 14 4 Op 3 . + CDS 14076 - 15272 1106 ## cauri_1439 arabinofuranosyl transferase C 15 4 Op 4 . + CDS 15269 - 15682 574 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase - Term 15652 - 15698 12.5 16 5 Tu 1 . - CDS 15716 - 16417 956 ## COG3253 Uncharacterized conserved protein 17 6 Op 1 . + CDS 16542 - 17207 645 ## cauri_1442 hypothetical protein 18 6 Op 2 . + CDS 17209 - 18432 1065 ## COG0349 Ribonuclease D 19 7 Tu 1 1/0.667 - CDS 18453 - 20351 1694 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 20389 - 20448 1.6 20 8 Op 1 . - CDS 20466 - 21758 572 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 21 8 Op 2 . - CDS 21755 - 22510 644 ## cauri_1446 hypothetical protein 22 8 Op 3 . - CDS 22566 - 23480 958 ## cauri_1447 hypothetical protein 23 8 Op 4 . - CDS 23527 - 24042 417 ## COG0756 dUTPase 24 9 Tu 1 . + CDS 24117 - 24644 459 ## cauri_1449 hypothetical protein + Term 24731 - 24757 1.0 25 10 Tu 1 . - CDS 24713 - 25003 374 ## cauri_1450 hypothetical protein - Prom 25048 - 25107 2.0 26 11 Op 1 3/0.333 + CDS 25336 - 26133 802 ## COG1940 Transcriptional regulator/sugar kinase + Term 26264 - 26312 -0.8 27 11 Op 2 . + CDS 26335 - 27792 1722 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 27812 - 27853 12.1 - Term 27800 - 27841 12.1 28 12 Op 1 . - CDS 27882 - 28592 628 ## COG3412 Uncharacterized protein conserved in bacteria 29 12 Op 2 . - CDS 28596 - 28775 214 ## Predicted protein(s) >gi|227860838|gb|ACLH01000082.1| GENE 1 39 - 497 447 152 aa, chain - ## HITS:1 COG:no KEGG:cauri_1427 NR:ns ## KEGG: cauri_1427 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 152 1 152 152 241 100.0 9e-63 MAIEIVIALAVLLVLGMWALYTAQRLNSLHIRTDAALAQLEATLDRRAAVISALAPELEV IAARAESTELVQGHFDERATRERELSAAIAQRFESRPPVLADAEGRIHLAHRFYNEAVSD TRALRLRPAVKLLRLGGTAKLPEYFELSQIDV >gi|227860838|gb|ACLH01000082.1| GENE 2 498 - 1598 822 366 aa, chain - ## HITS:1 COG:Cgl1627 KEGG:ns NR:ns ## COG: Cgl1627 COG0438 # Protein_GI_number: 19552877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 1 358 1 354 361 476 67.0 1e-134 MRIGIICPYSFDEPGGVQAHILDLATMFIEQGHHVEVLGPASTSTQVPSFVRKGGWAVPI TYNGSVARLAIGPHVHRNIKRFIREGDFDILHIHEPNSPSYSMAALAVVRGPIVATYHAS ASSSLVLTLAKPFLRPYLEKVRGGIAVSEMARRWQVEQLGGDPVLIPNGVDTSVYARERA RAEHKENNSEIEIVFLGRLDEPRKGLDILLEALTLLPQPVRVTVMGGGHPRRVPGVDFVG RVSDAEKAAILGRADIYVAPNTGGESFGIVLVEAMAAGCAVVASDLEAFAAVCNADSEEP AGALFKNGDATDLARVLEDLVTHSDKRQALIKAGVERAREYDWDHVAAAVMQVYETVADG TKVRVS >gi|227860838|gb|ACLH01000082.1| GENE 3 1617 - 2519 556 300 aa, chain - ## HITS:1 COG:Cgl1628 KEGG:ns NR:ns ## COG: Cgl1628 COG1560 # Protein_GI_number: 19552878 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Corynebacterium glutamicum # 7 300 14 307 321 367 60.0 1e-101 MALLDRDRLTAAAYIACWKVVRFLPQPLAVWLFERGADLASNNGQGMEQLRQNLSRVVGA ENVTRELVRDSMRSYMRYWLEAFRLPAIHSDPDLQRRLLTGLRGKEHADASVASGRGVIF ALPHSGNWDMAGVFCVGHYGGFTTVAERLKPEVLFDAFVDYRESLGFTVLPLTGGSSSPY SRLKDTLERGGVVCLLSERDLTRTGVTVDFMGEEANVAAGPAQLAIETGAALHVVHSWFD GKGWGLSVSPEVEVTDLQETCQRLADGFVENIRAHPEDWHMLQPHWNADVERRRASRQKK >gi|227860838|gb|ACLH01000082.1| GENE 4 2585 - 3220 875 211 aa, chain - ## HITS:1 COG:Cgl1629 KEGG:ns NR:ns ## COG: Cgl1629 COG0558 # Protein_GI_number: 19552879 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Corynebacterium glutamicum # 1 206 1 206 219 233 60.0 2e-61 MLSVHGRKPAAVVVVPVAKLFLKMGLTPNVVTVVGTIVTIAISVILIPLDHLFAAALLSG LFAAFDMLDGTMARLTTGGSNFGATLDASCDRITDGALFAAIAYWMVYVDNAHPINFAAC MVVLVSSQVISYVKARGEASGFKMVGGLVERPERLILGLGGVGLEGLGVPYALEVALWLL AVGSAFTIYQRMRQAARQDTKARFKKDLKHL >gi|227860838|gb|ACLH01000082.1| GENE 5 3213 - 3791 571 192 aa, chain - ## HITS:1 COG:Cgl1630 KEGG:ns NR:ns ## COG: Cgl1630 COG0537 # Protein_GI_number: 19552880 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Corynebacterium glutamicum # 24 180 1 157 180 233 66.0 2e-61 MGEYVDTGLGTPDRLERLWAPYRMSYIKREGGAGDVPKEAHNPFVEIPQMSDEDGLIVAR GELVYCVLNLYPYNAGHMMIIPYRQESELENLTEEESRELFQFAQAAIRVLKKVSGPDAV NAGFNLGRASGGSVGQHLHMHIVPRWSGDSNFMTIVDGVKVLPQLLKDTRSLLAQGWAEL AAEGIISGEAHA >gi|227860838|gb|ACLH01000082.1| GENE 6 3837 - 5900 2666 687 aa, chain - ## HITS:1 COG:Cgl1631 KEGG:ns NR:ns ## COG: Cgl1631 COG0441 # Protein_GI_number: 19552881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 17 686 16 685 686 1120 80.0 0 MAEMIPAVPVNYEPITVPAGTAVGAAMREHELPNKGPEAVVVVRGADGTLYDLSHTPDTD AEFTPVAACEEDGRAVIRHSCGHVMAQAVQAEFPGTKLGIGPAIENGFYFDFQTAKPFTP EDLKAIEKRMKKIIKGGQRFERHVYASTEEAEAALANEPFKLELVQDKGNVDPDSDEAAE VGAGDLTHYDNVNPRTGEVEWFDLCRGPHVPTTKYIPAFTLTRSSAAYWRGDQTKAGLQR IYGTAFESKEALESYKTMVEEAEKRDHRRLGAELDLFSFPDEIGSGFPVFHPNGATVRME MEEHSRRRHIADGYSFVSTPHLTKGDLFKKSGHLDFYADGMFPPMQLDGEWDADGYCTKQ PQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDD SHIYCTPEQLEEELTKVLEFIISLLKDYGLDDFYLELSTKDPNKYVGSDEIWERSTAILQ SVAEKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFELEYTASDG SKQRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVADTFAPHLEKVCAEL RSRGLRADVDTSDDRMQKKIRNHTTGKVPFMLLAGERDVEADAVSFRFLDGTQVNGVPVE AAVNVIEAWVRERNNEQPTKDSIAERV >gi|227860838|gb|ACLH01000082.1| GENE 7 5994 - 7277 854 427 aa, chain - ## HITS:1 COG:Cgl1632 KEGG:ns NR:ns ## COG: Cgl1632 COG2837 # Protein_GI_number: 19552882 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Corynebacterium glutamicum # 74 425 3 360 361 414 57.0 1e-115 MSGFEEPVSRRGLLAGSAVAASAVALASCAKGDEPGQASADASADASRAAQAGDAGSTGP VNREETMGDDIVAFDGKHQAGIQTPVQAHVELVGFNLKKDTTARGAAALMRLWTEDARRL CTGENPLGSLEPELSTTPANLTVTCGWGEGFFDTVDVAKPSWLRDIQAFDHDDLRPEWGQ TDIVLQICSDDPFTAAFVLRHMTRAGKDYADVAWIQQGFSHAYGSAPKGMTPRNLFGQKD GTVNPRSDEDFNEQVWIEDGPFAGGSAMVVRRIHMNLDTWEQLDRAARENSTGRTLDTGA PIGAKDEFDPVDLDARNEFGLKAIDENSHVARAHPPAEHPEQKLLRRPYNYNLPPTPETT QRGELSNAGLIFICYQKDPTTQFEPIQARLDEADRLNEWIRHIGSAVYFMPAGTEGETFW GESLIRS >gi|227860838|gb|ACLH01000082.1| GENE 8 7344 - 8036 724 230 aa, chain - ## HITS:1 COG:Cgl1633 KEGG:ns NR:ns ## COG: Cgl1633 COG2847 # Protein_GI_number: 19552883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 13 198 8 179 182 150 50.0 2e-36 MLNTRSFLRVSVAALAAGSLTLAACSPSEEDSAAAPSSAASSAENGAEKDKDAEASTSVS SSAESGVIFEDAVARAMEKDSDMTAIFGTLHNNTDKDINVVGFSSSVKAKHYEIHEVVDG VMQEKEGGFDIPAGESLELAPGGFHFMLMGVTEPVMAGETATLTLELADGSTIELGDIPV RTIGAGDEDYGDMGHMNHGDMDHGSMDNDEHMDHSDSADMSDMKKEEHAH >gi|227860838|gb|ACLH01000082.1| GENE 9 8113 - 8700 620 195 aa, chain - ## HITS:1 COG:Cgl1634 KEGG:ns NR:ns ## COG: Cgl1634 COG2372 # Protein_GI_number: 19552884 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Corynebacterium glutamicum # 1 186 7 201 204 107 39.0 1e-23 MQLRQVTTGITAGAVGLAIGLSTPLAMAHDSVIGGNVVGDAPLEEFPREITLEFSGIPRD DFNTFAVSDKSSGEVLFDATPTIDGRNLTVEVPQDIEPGDGEYQVGFRITSSDGHSTLGS VPFSVGSGAGGHEAADTSDDGAKEGEEAQESQDPLSSLPTAAKWIVGVGAVLVVGAALFA FGAKTRRAGGEGSEG >gi|227860838|gb|ACLH01000082.1| GENE 10 8890 - 10749 1147 619 aa, chain - ## HITS:1 COG:Cgl0992 KEGG:ns NR:ns ## COG: Cgl0992 COG2304 # Protein_GI_number: 19552242 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Corynebacterium glutamicum # 1 581 1 564 594 252 33.0 2e-66 MLVLDSSGSMNVQDAGGQTRLDAAKDATKKFVSELGGTIPLGLVTYGGTVDEAPENQEAG CQDIHVVSGPKEDVGDSFTGPIDALQAKGYTPIGDSLKKAAEELGGQHGTIVLVSDGIDT CAPPPVCEVAKELHEQGIDLVINTIGFNVDEEARKELSCIAEAAGGEYLDADDADSLAAM IKKAAGRAADIYQSDVEQIEGSEDISQPTPLPRWESGGSFVFRAQLEPPTNGGEDTHKDF HAESWSIPVKPGERYVASIYKTLDGAVVRPQSLRMSVFFGDGSEPPTGNHGGEQGSIECT ADQDSFHTGIRADALPSASAFTREIGSEKCPSDELVLTAKRSMTHKAEEPLDVEILLHRI DPVTNMDELVSGMDSEVEGELHAKFEGAEKVRAASWFGDAIELQSGDTIETDIVRGEAQV FKVPMKEGQQLATALKVGEMSDENALKYSSLNLEILNPARERAGDNEFMSAVNEEQEIAA HSVTPTAFANRFGQSQANGQKAQANWLEGDYYVLVTLDAGTDSEKEDEVLDGKRDTVKYA LTAKVLGEPIQGPIYEPVKDKTEAPESDGDEGNVDQAASADEDKGLGLGTLSYFLAAALG IIALAVIILVAILLRGRSH >gi|227860838|gb|ACLH01000082.1| GENE 11 11565 - 11861 117 98 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRDTGIEPVTSSVSGKRSPTELIALMYLSRLSTYADKAEGQESPGADDETRTRDPHLGKV MRYQLRYIRIARSRLVCRGARRNFIVHRPSFQIRSPQH >gi|227860838|gb|ACLH01000082.1| GENE 12 12502 - 13347 404 281 aa, chain + ## HITS:1 COG:Cgl2804 KEGG:ns NR:ns ## COG: Cgl2804 COG1275 # Protein_GI_number: 19554054 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Corynebacterium glutamicum # 1 265 28 314 339 103 35.0 3e-22 MGTSIASTLSGLHGLRVGQIVFALIAAVLLVIFTVGAKNEPPRHQNMAAWGMYTMGLLAC GSAWTALTGTDAFQLASWWIGAPLSVVVCLWQLWGLFKQQDHYDKPAFPWGLALVSPMVA ATSAGQLAINHGQFYHYAGELCFFLTFITAIPLFAYCYWSLVRCQDRPREAAAGTAWIPL GVVGQSTAASTLLFDAHLYGIIMFIIGAPCVVFAMYCFYQAVVAWAPYGPGWWGSTFPVG TLCLGSWDEGWHRLSLALLVLLLLHWGASALRFGTWRFQRA >gi|227860838|gb|ACLH01000082.1| GENE 13 13414 - 14064 589 216 aa, chain + ## HITS:1 COG:Cgl1850 KEGG:ns NR:ns ## COG: Cgl1850 COG1985 # Protein_GI_number: 19553100 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Corynebacterium glutamicum # 18 214 19 232 232 132 39.0 4e-31 MSDTALIEHLMGPDREGIRLIAVSTLHGSATIDGTSGPMGNGTDAQLFAALREWADIAVI GSATVKSEEYGPSTSTRLAVLSHSLDFAGFEEFIASGPIVLTPEERASSPEARRLANAGA EVISTGTGTMSEAIAALRAQGARRISCEGGPSVYSAFIAEGLMDKLYLTLDPHLSPSVEK PVVDGAATSPALKLELENVTAVDSTVFLRYRRTQTP >gi|227860838|gb|ACLH01000082.1| GENE 14 14076 - 15272 1106 398 aa, chain + ## HITS:1 COG:no KEGG:cauri_1439 NR:ns ## KEGG: cauri_1439 # Name: aftC # Def: arabinofuranosyl transferase C # Organism: C.aurimucosum # Pathway: not_defined # 1 398 1 398 398 624 100.0 1e-177 MTSPAPSLSAPARLWTAAAWPAAIVVVFHRIFVLAFNGTVTDDFGTVYRAIRNLWEGTPV YEQNYSFVEPLYLYNPGATVLLSPLGLVSEEHARIAFILANAAAIIAALAVLTRFVGHSL RGPLWPVSIAAAFATESVINTLVFTNINGLLLLAMVAFLALLDKHGWAAGLCIGLAIVVK PQFAPLLFLALVRKRWLTVGLGVAVPLVANLAAWPFVPGVEGFRANLLPYLSTTRDYANA SWPGVRAYFDLPGIIYYPIWLLFAALAAVAILGLLRWRDSEPTFWALSTSGAIMVGIFFL SSLGQQYYSMWLIPMLFTAVLARSVFHTWGAWLAAFLFLAPLEWTSASMPTAAHWMSVFI ATLGWGLLIVVTAASVSGWWTAERGTSSKPQASDRIPA >gi|227860838|gb|ACLH01000082.1| GENE 15 15269 - 15682 574 137 aa, chain + ## HITS:1 COG:Cgl1852 KEGG:ns NR:ns ## COG: Cgl1852 COG0229 # Protein_GI_number: 19553102 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Corynebacterium glutamicum # 1 135 1 135 136 247 87.0 3e-66 MTDFKLIADTEWRKRLSPEEYHVLREAGTEAPHVGEYTNTTTEGVYSCRACGAELFRSTE KFESHCGWPSFFSPLAGDAVIEREDNSLGMRRIEVLCANCESHLGHVFEGEGYDTPTDLR YCINSICLDLEEKPVED >gi|227860838|gb|ACLH01000082.1| GENE 16 15716 - 16417 956 233 aa, chain - ## HITS:1 COG:Cgl1853 KEGG:ns NR:ns ## COG: Cgl1853 COG3253 # Protein_GI_number: 19553103 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 233 1 232 232 343 72.0 2e-94 MSKVNFAELNKVQRYSQHAVFQVIPGALGTEREEIVAQAQKFFSELEEAGVVTVRGIYDL SGMRESADYMIWWHAEEFADIQKAFADFRRETVLGQVSEVTWVGNALHRPAEFNKSHLPS FIMGEEPGEWISVYPFVRSYDWYTMDEEKRRRILMEHGMQARDYPDVRANTVPAFALGDY EWILAFEAPELHRIVDLMYLMRYTEARHHVREEIPFHTGRRVKDVAELIAILP >gi|227860838|gb|ACLH01000082.1| GENE 17 16542 - 17207 645 221 aa, chain + ## HITS:1 COG:no KEGG:cauri_1442 NR:ns ## KEGG: cauri_1442 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 221 1 221 221 391 100.0 1e-107 MSNSDVSSRNLAGAPTNLHDRAAASSAESRPAEPSTPTAFTEAVESLHAARLRPEITLGT IRPPQRLTPFSHAIGLEVERKEHGDLIPTDSEGDAFGRLILLHDPGAEEAWEGAMRLVAY IQADLDDAVAGDPLLPDVAWEWLTESLDVREATHTNLGGTVTSTASVRFGEIGGPPRAYQ LEMRASWTASGLDLAPHVEAFAQVLSLVAGLPPEGVAELGR >gi|227860838|gb|ACLH01000082.1| GENE 18 17209 - 18432 1065 407 aa, chain + ## HITS:1 COG:Cgl1855 KEGG:ns NR:ns ## COG: Cgl1855 COG0349 # Protein_GI_number: 19553105 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Corynebacterium glutamicum # 1 407 2 402 403 400 52.0 1e-111 MSELRQVPVDGTPKVLLSPREFQAGAARLAAGTGPFAIDTERASSYRFDDRAFLVQVRRE GAGTFLFAPEHHRDELHAALAPVLNGQEWVVHAAPSDLPSLAWLGLYPGMLFDTELAARF AGFAHPNLAAMVLELFDVELEKGYGDSDWSETPIPRKWRNYAALDVELLNELAVTLRDIL AEQDKLDWAYEEFERIVEDHARITGPEPRSWRALKGVSSLRSREQLVVARELWQRRESIA RSQDIAPNRVLSHRVLVEIARRVPRSPHEINQVKGFPRRRGGATLRWFDAVETALASPRQ QWPKALRSPHPVPSKSVFNRDFPELWQLYTEIRGDFEDLGEELGMSYELILKPSLVRTVV WAACGPEGGVAGEIAADADIPDFLRSQGAREWQVELSTPLLRRGLAR >gi|227860838|gb|ACLH01000082.1| GENE 19 18453 - 20351 1694 632 aa, chain - ## HITS:1 COG:Cgl1856 KEGG:ns NR:ns ## COG: Cgl1856 COG1154 # Protein_GI_number: 19553106 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Corynebacterium glutamicum # 1 628 1 630 636 842 66.0 0 MGILDSIQSPGDLKALSKTQLVELAADIRQRLIEKVSATGGHLGPNLGVVELTVAIHRVF DSPRDPIVFDTSHQSYVHKMLTGRANQFDSLRQKGGLSGYTDRGESEHDWTESSHASAAL STVDGLSKAFKIRGESHRNAVAVVGDGALTGGMCWEALNNISADKDRNVVIIVNDNGRSY SPTIGGLSENLGRIRAQHGYDEFMELGKKRLKSMGWVGERTFDALHAVKEGVKSTVLPTE MFPELGIKYIGPINGHDIDAVVRALSYARDYDGPIIVHTVTEKGHGFAPAVNEPKDQMHS TGAIDPVTGVSKGQKQPGWTAAFSEELIKAGHAREDIVAITAAMAGPTGLAPFQEEFPER FFDVGIAEQHAMASASGLALAGMHPVVAVYSTFLNRAVDQVVMDIALLKLPVTIVLDRAG VTGSDGPSHNGVWDMALMSIVPGMRIAAPRDGARLRELFNEAIAIEDGPTVVRFPKGNLL EDCEAIKRLDDGVDILRYTDAAESADEATDVLIVSIGAMSARSLGAAEVLESQGFNVTVV DPRWPVPVPQSIVALAADHDLVVTVEDGLLRGGVGSMVAEALDAADVDTPVHRLGVPGCF PKHASRGEILEEFGLTPEGIAESVSEWVAARS >gi|227860838|gb|ACLH01000082.1| GENE 20 20466 - 21758 572 430 aa, chain - ## HITS:1 COG:Cgl1857 KEGG:ns NR:ns ## COG: Cgl1857 COG2265 # Protein_GI_number: 19553107 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Corynebacterium glutamicum # 9 427 3 409 412 374 51.0 1e-103 MTKTERNAESAAITKGQSFDTTVERMGHGGVGIGAAPDGRVCFVPGAFPGDQVTVTAAKV KKSFVEAEINAVLQASPDRVESACPAAQRGAGCCDFAELDPAAEPGIKVAVLRDQLRRVG RLENVPEIEAVDVAPQRGWRTRVRLGVDKQGRAGVRKRGSTELITDVACSQLIPGLVSGL VGPGARTFSPGAEVIAVMDSDGNRHVVETRKAPRGRRVETIRETIEAPTQDVVQRADGHE FHFPPTAFWQAHIGAPDVYTQLARQWLAAEGEAEEHEATRESEVTAVAWDLYGGVGLFVP ALAEVTAPEGGHTTVYSVDYSPAAAVAQPGLSDIDVHFRTAKVEQAASQLPRPARVILDP PRTGAGVEVVEAIAAAAPQRVLHIGCDPATFARDIAAWSERGYCLERLAMVNAFPGTHHF ETLALLVPAA >gi|227860838|gb|ACLH01000082.1| GENE 21 21755 - 22510 644 251 aa, chain - ## HITS:1 COG:no KEGG:cauri_1446 NR:ns ## KEGG: cauri_1446 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 251 1 251 251 433 100.0 1e-120 MTTPTPEEHDFTEHGTDPNPADTAGPSADTSPQATAVVSDSEAEPSLLEQMGGLTGLVSA TLPVLVLIPVNNVWGLGPALAAALGVALAISVWRLARKETLQPAVSGLLGVAICAAIAWF TGDAKGYFLYGIWMSLVLFIVAVVSIIARWPLVGVVWKGLNGDDMGWRTVPQARRAYALA TAGWAAVFIARFIVQRALYDADETTTLGIVRILMGWPLTGIVTILTVWMVRRANAAVEEA KGSEKTQGENL >gi|227860838|gb|ACLH01000082.1| GENE 22 22566 - 23480 958 304 aa, chain - ## HITS:1 COG:no KEGG:cauri_1447 NR:ns ## KEGG: cauri_1447 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 304 1 304 304 507 100.0 1e-142 MAMWPFGKKKKDENKTEDAGKNPDVRHDEAVPESAETVDDTAASAPADSNAGPVREDSDV FHGVTGLKAVAHDAINGEMGPYDGDNVDIAEFNFEDFSVGLLDLGSMRIPLPKGSQVQVE MGQDGPRMLHILTPHGRMTPVAFAAPRTPGQWAESAEDIVQGLEADGFAAHPEDGPWGSE IVGSSDKGGIRIIGVEGPRWMYRLTLAAPAGKEEELAKLGREVVARTFIYRGEEPILAGS SLPVMLPQQLAEQVQQALKQRQQQAADADNTAAPEAASATAGAENAAEAQAREQLRDLED NEKN >gi|227860838|gb|ACLH01000082.1| GENE 23 23527 - 24042 417 171 aa, chain - ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 24 169 1 146 149 198 68.0 4e-51 MGGARWKQGRLGRVNEQHPLVDPVSPFGEIQVKRLDKELPLPQRAHRGDAGADLYAAHDV TLRPGERALVGTGIALALPMGTVGLVHPRSGLAAKHGISVVNTPGTIDAEYRGEIKVCLI NHDPVETFEVERGMRIAQLLVQRVELVGFREVEELDDTARGEGGYGSTGVN >gi|227860838|gb|ACLH01000082.1| GENE 24 24117 - 24644 459 175 aa, chain + ## HITS:1 COG:no KEGG:cauri_1449 NR:ns ## KEGG: cauri_1449 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 175 1 175 175 259 100.0 4e-68 MTSSSSSASPSAAAESPVILYRERQWVPWHWWLMAAAVVAISTATVSLNRGIMWVIIPAI LLSAIAVWVLLAWSNTVVQVEQDADGTRWLTVKDAQLPHDVVSRSTAVPATARRNALGPQ LDPAAFLVTHGWVPEHVMLVLDDPEDPTPYWLIGSKNPAKLLAAFVPEQAAAAKA >gi|227860838|gb|ACLH01000082.1| GENE 25 24713 - 25003 374 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_1450 NR:ns ## KEGG: cauri_1450 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 96 1 96 96 160 100.0 2e-38 MATDYDAPRRRAEDELEADSLEGLKAAENDNNGMDDDGEIVEAFEPPSVDLTGEELNVTV VPRKDNEFTCSVCYLVQSNKRLDHEEDGQPVCMDCA >gi|227860838|gb|ACLH01000082.1| GENE 26 25336 - 26133 802 265 aa, chain + ## HITS:1 COG:Cgl1864 KEGG:ns NR:ns ## COG: Cgl1864 COG1940 # Protein_GI_number: 19553114 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Corynebacterium glutamicum # 21 265 5 250 250 305 62.0 4e-83 MTAQESQQQDTNPSPQHHGHAFGIDVGGSGIKGAVVDLATGEFVGDRLKIATPQPATPDA VATVIAQIVAEKNWDGPVGITMPAVVKEQIIRSAANIDKSWIGVDAQDLLGKYLDAPFTV LNDADAAGLAEVAYGDDVARSGPVIFLTLGTGIGSAFLLDGQLFPNTEIGHLIVGEKEAE HQASSAVKDREGLKTKQWAKRVNRVLHEYEALFNPSAFVIGGGISRKFDKWGEHLSIETP VVAAQLRNRAGIVGAAMAAKEGIRP >gi|227860838|gb|ACLH01000082.1| GENE 27 26335 - 27792 1722 485 aa, chain + ## HITS:1 COG:Cgl1865 KEGG:ns NR:ns ## COG: Cgl1865 COG0568 # Protein_GI_number: 19553115 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Corynebacterium glutamicum # 154 485 163 494 494 525 93.0 1e-149 MAATDSSDQVLGEGESTSEASAPAQKTAKKTAKKTAKKTAKKTAKKTAKKTAKKTAKKTA KKTTRKSAQKATKKTAKKTVRKSAAKKATSPESSESADELAEDQNDELDAETNDDADIDF DPDNAELDEDDEFGDDDDDLEGEDSEEEDDGSSVWDEDESAALRQARKDAELTASADSVR AYLKQIGKVALLNAEQEVSLAKRIEAGLYAQYRMDEMEKARAEGDKAAKLSPMEKRDMRA IARDGRKAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKF STYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPLELAKEM DITEEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDV LTTLSEREAGVVRLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVL RDYLD >gi|227860838|gb|ACLH01000082.1| GENE 28 27882 - 28592 628 236 aa, chain - ## HITS:1 COG:lin2845 KEGG:ns NR:ns ## COG: lin2845 COG3412 # Protein_GI_number: 16801905 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 128 1 123 124 72 41.0 7e-13 MAQPRVGLVLVSHSAKLVEGLTELAAQMAPDVTILPAGGVEEGGIGTSFDLVEGAISHAR GQGLSVVVLTDLGSATMTVESVLEFLDEDTVKFVDAPLVEATIAAATAAQQGDGLAAVVK AAERAIEVFLPKQPSATASAEEDDLDTNAGGYSLTVTVADEAGLHARPASRIAELAAEAA GDVTLSCHGESAEADSAMMLMSLGVSQGASVTISGDVSDKDVIDRIATAIELGIEG >gi|227860838|gb|ACLH01000082.1| GENE 29 28596 - 28775 214 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no AAADAAAAGAEATIPMVATKGRASYLGERSAGHKDPGATSSALFIAAAADATETLKEEA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:55:11 2011 Seq name: gi|227860837|gb|ACLH01000083.1| Corynebacterium aurimucosum ATCC 700975 contig00164, whole genome shotgun sequence Length of sequence - 51505 bp Number of predicted genes - 50, with homology - 47 Number of transcription units - 27, operones - 16 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 10/0.000 - CDS 3 - 420 232 ## COG2376 Dihydroxyacetone kinase 2 1 Op 2 . - CDS 423 - 1424 1098 ## COG2376 Dihydroxyacetone kinase 3 2 Tu 1 . - CDS 1532 - 3322 1899 ## COG1061 DNA or RNA helicases of superfamily II 4 3 Tu 1 . - CDS 3425 - 3676 274 ## cauri_1457 hypothetical protein 5 4 Op 1 . + CDS 3920 - 4207 147 ## cauri_1458 hypothetical protein 6 4 Op 2 1/0.600 + CDS 4250 - 5827 1176 ## COG2890 Methylase of polypeptide chain release factors 7 4 Op 3 1/0.600 + CDS 5927 - 6403 296 ## COG1490 D-Tyr-tRNAtyr deacylase 8 5 Op 1 4/0.000 + CDS 6542 - 7537 1410 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 7599 - 7643 1.5 + Prom 7697 - 7756 2.4 9 5 Op 2 1/0.600 + CDS 7829 - 8509 556 ## COG1321 Mn-dependent transcriptional regulator 10 5 Op 3 . + CDS 8515 - 9498 922 ## COG1087 UDP-glucose 4-epimerase - Term 9381 - 9411 -0.6 11 6 Tu 1 . - CDS 9455 - 10489 453 ## cauri_1464 hypothetical protein - Prom 10628 - 10687 2.5 + Prom 10728 - 10787 2.2 12 7 Tu 1 . + CDS 10957 - 11976 1148 ## cauri_1465 hypothetical protein 13 8 Op 1 . + CDS 12127 - 14652 2391 ## COG4581 Superfamily II RNA helicase 14 8 Op 2 . + CDS 14733 - 15857 1133 ## COG3641 Predicted membrane protein, putative toxin regulator 15 8 Op 3 . + CDS 15886 - 16263 334 ## cauri_1468 hypothetical protein + Prom 16277 - 16336 2.4 16 9 Tu 1 . + CDS 16406 - 17116 671 ## COG1814 Uncharacterized membrane protein - Term 17163 - 17209 9.4 17 10 Op 1 4/0.000 - CDS 17245 - 17778 665 ## COG2128 Uncharacterized conserved protein 18 10 Op 2 . - CDS 17823 - 18416 897 ## COG0450 Peroxiredoxin - Prom 18518 - 18577 4.0 19 11 Tu 1 . + CDS 18590 - 19549 1049 ## COG0583 Transcriptional regulator - Term 19573 - 19633 19.2 20 12 Tu 1 . - CDS 19656 - 20723 1353 ## COG5473 Predicted integral membrane protein - Prom 20759 - 20818 2.1 + Prom 20711 - 20770 4.0 21 13 Tu 1 . + CDS 20832 - 24707 3524 ## COG1643 HrpA-like helicases + Term 24725 - 24752 -0.9 22 14 Op 1 . - CDS 24704 - 25162 276 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 23 14 Op 2 . - CDS 25218 - 25625 192 ## cauri_1476 cell wall hydrolase interfering with FtsZ ring assembly - Prom 25737 - 25796 2.9 24 15 Tu 1 . + CDS 25914 - 26636 846 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Term 26457 - 26510 -0.4 25 16 Op 1 . - CDS 26669 - 26914 82 ## 26 16 Op 2 . - CDS 26827 - 26994 71 ## - Prom 27087 - 27146 1.7 + Prom 26762 - 26821 1.8 27 17 Tu 1 . + CDS 27006 - 27788 669 ## COG1349 Transcriptional regulators of sugar metabolism 28 18 Op 1 . - CDS 27871 - 29565 1502 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 29 18 Op 2 . - CDS 29610 - 29687 77 ## + Prom 29629 - 29688 4.0 30 19 Op 1 19/0.000 + CDS 29804 - 30775 863 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 31 19 Op 2 2/0.200 + CDS 30798 - 32882 2306 ## COG1299 Phosphotransferase system, fructose-specific IIC component 32 19 Op 3 . + CDS 32941 - 33210 474 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 33236 - 33284 10.5 33 20 Op 1 . - CDS 33574 - 34854 635 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 34 20 Op 2 . - CDS 34889 - 36367 649 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 + Prom 36329 - 36388 2.1 35 21 Op 1 . + CDS 36475 - 37269 822 ## cauri_1485 hypothetical protein 36 21 Op 2 . + CDS 37290 - 37823 396 ## cauri_1486 hypothetical protein - Term 37798 - 37832 4.1 37 22 Op 1 4/0.000 - CDS 37841 - 38677 678 ## COG0253 Diaminopimelate epimerase 38 22 Op 2 . - CDS 38689 - 39615 465 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 39 22 Op 3 . - CDS 39615 - 40247 389 ## cauri_1489 hypothetical protein + Prom 40262 - 40321 2.6 40 23 Op 1 . + CDS 40379 - 41695 1650 ## cauri_1490 hypothetical protein 41 23 Op 2 . + CDS 41711 - 42787 764 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 42709 - 42735 -0.7 42 24 Tu 1 . - CDS 42769 - 43713 415 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 43 25 Op 1 . - CDS 43887 - 44519 362 ## cauri_1493 hypothetical protein 44 25 Op 2 . - CDS 44541 - 46067 480 ## PROTEIN SUPPORTED gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase - Prom 46095 - 46154 2.0 + Prom 46127 - 46186 2.1 45 26 Op 1 16/0.000 + CDS 46221 - 46970 625 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 46 26 Op 2 31/0.000 + CDS 47033 - 47917 1240 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 47 26 Op 3 17/0.000 + CDS 47994 - 48680 893 ## COG0765 ABC-type amino acid transport system, permease component 48 26 Op 4 . + CDS 48680 - 49618 935 ## COG0765 ABC-type amino acid transport system, permease component + Term 49769 - 49806 3.1 49 27 Op 1 14/0.000 - CDS 49639 - 50232 515 ## COG2137 Uncharacterized protein conserved in bacteria 50 27 Op 2 . - CDS 50242 - 51375 1473 ## COG0468 RecA/RadA recombinase - Prom 51431 - 51490 2.5 Predicted protein(s) >gi|227860837|gb|ACLH01000083.1| GENE 1 3 - 420 232 139 aa, chain - ## HITS:1 COG:lin2844 KEGG:ns NR:ns ## COG: lin2844 COG2376 # Protein_GI_number: 16801904 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Listeria innocua # 6 138 2 131 198 97 44.0 8e-21 MTDNATLSTAWAQAWMKNCAAAAHEHREELIELDRAIGDSDHGENVDRGFRAVVEKVDSD ISPEASHVADVLKLTAKTLMSTVGGASGPLLGTAFLRAAKAAGPGEIDAPTTAALIEAAL EGITVRGKAAEGEKTMVDA >gi|227860837|gb|ACLH01000083.1| GENE 2 423 - 1424 1098 333 aa, chain - ## HITS:1 COG:ycgT KEGG:ns NR:ns ## COG: ycgT COG2376 # Protein_GI_number: 16129163 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 1 332 11 365 366 340 50.0 3e-93 MKKLINSPDNVVAESVEGFALAHGDIVTRSTDPLFVARKQKKDNGKVAIVSGGGSGHEPL HAGFVGQGMLDAAVPGAMFTSPTPDAIQAATEAVNAGAGVLYIVKNYTGDVLNFDTAAEL AEFDDIEVSQVVVDDDVAVEDSTFTAGRRGVAGTLLVEKLAGAAAERGDDLAAVTAVAKK VVDNTATMGAALSACTVPHVGKPSFDLGESEVELGVGIHGEPGRKEIPLVSADDVTDHLL DPVLADLKLSDGERSIVVVNGMGATPASELYVVYRRVSQRLQEVGVSIERSLVGNFVTSL DMAGCSVTVMRADEEDLELFDAPCHTAALRQGM >gi|227860837|gb|ACLH01000083.1| GENE 3 1532 - 3322 1899 596 aa, chain - ## HITS:1 COG:Cgl1868 KEGG:ns NR:ns ## COG: Cgl1868 COG1061 # Protein_GI_number: 19553118 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 13 596 2 570 570 824 73.0 0 MSTQTPAQRFANNGSLRVWQRAALDKFLATKPKDFMAVATPGAGKTTFALRVATELMADR TVERVIVVVPTEHLKVQWSESASRVGLALDPKFTNSSGVNPAMDGVVVTYAQVGMHPFKH RAVASARRTLVILDEIHHAGDAKSWGDGVREAYDDAEHRLALTGTPFRSDDSQIPFVRYE EDGEGHLVSRSDHTYGYGDALADGVVRPVVFLSYSGESRWRDSAGEEHAARLGDILNPEQ TARAWRTALDPKGEWIPTVLQAAHTRLMQMRRNMPDAGGLVLATDTTTARAYAKILKQIS NTPVSVILSDDPGSSARIAEFSESTDEWMVAVRMVSEGVDVPRLAVGVYATSASTPLFFA QAIGRFVRSRMPGETASVFLPSVPVLLGLAENMEKQRDHVLGGEKNPDKEGWDDELLEDA NKKKSEPDMLEPSYESLGAEAEFSGLLYNGSQFTTGNITDEEEDFLGIPGLLDADQVKDL LRKKQSDELDRREAEEKARRAAEAAEEQRRKLYGTPHAPKRGAEASASSAGSQPGVVDEI SALRKELNTVVSITAQRTGRPHGAIHTEARKACGGPPTALCNAEQLQERIDYLRKW >gi|227860837|gb|ACLH01000083.1| GENE 4 3425 - 3676 274 83 aa, chain - ## HITS:1 COG:no KEGG:cauri_1457 NR:ns ## KEGG: cauri_1457 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 83 1 83 83 154 100.0 8e-37 MIVGVSTTTKTIERPDVREDTSTNDDTPKFFHYVKKNQILDSAVNGKYVVALCGETFPVT KQAKPGSPVCPDCERVYKSLRRR >gi|227860837|gb|ACLH01000083.1| GENE 5 3920 - 4207 147 95 aa, chain + ## HITS:1 COG:no KEGG:cauri_1458 NR:ns ## KEGG: cauri_1458 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 95 66 160 160 185 100.0 5e-46 MVYVWQWWIPAALVVAVTFPLPWIAVVIGNGRGQKKDKREKAVYKPALARQMAQAQREEL TSGSHGELPGAPGRHHPTSGADANSTATDTIDHED >gi|227860837|gb|ACLH01000083.1| GENE 6 4250 - 5827 1176 525 aa, chain + ## HITS:1 COG:Cgl1871 KEGG:ns NR:ns ## COG: Cgl1871 COG2890 # Protein_GI_number: 19553121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Corynebacterium glutamicum # 18 519 5 507 509 540 55.0 1e-153 MSTQQPSPFGPAMNPEHPIADVAAELSRVFADAGFSADGIAGHLGPEYTEALHRGEPAAV ALGAGGDSRLDHLIRIFLLHEHVPATLFSDVLGARLATQLIDCGVVLSDEHGTAYVAYDI RPHIIVGKNRVVFSDVDASLVDHVPGPEHVLGVGSASLSLLHSTPTTPVESVLDLGTGSG VQVLGQLDSAQRIVATDVHERALELARATVLTAEAEDRVELRHGSWYEPVENERFDRIVA NPPFVVGLPEVGHVYRDSGLNLDGASELVVSQAVEHLNPGGTAHVLAAWVHQGEESWQQR VGSWLPDTGVAAWIIQRDVADPALYVSTWLSDESVDVRSSEGQERSRRWLEHFRKHEVTG IGFGFVAIQRIGEDEPSDILAETMAQPVIDPLGPEVEEYFARVEWLRNLLPGELETKHVQ LRPGVAREDVALPDGDLGMGFERAALRLSRTDGPRWQHDVDEHLAAIVAGLNPNGLSIGE TIELYAAAQGFEETELVSAALPAIVDLIRHGLLIPTELLAFSNTE >gi|227860837|gb|ACLH01000083.1| GENE 7 5927 - 6403 296 158 aa, chain + ## HITS:1 COG:Cgl1872 KEGG:ns NR:ns ## COG: Cgl1872 COG1490 # Protein_GI_number: 19553122 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Corynebacterium glutamicum # 1 157 1 143 144 185 67.0 3e-47 MRAVLTRVSEASVTVDNDVVGSITCPDTGGILALIGVSREDIEAGGDFTASDGPTLEERM DTMARKIAELRILEGETSVVDSGAPVLVVSQFTLYGRTAKGRRPSWPDAAPGEAAEPVIQ GVVARLRERGITVEEGRFGAMMRVSSVNEGPFTVLVEV >gi|227860837|gb|ACLH01000083.1| GENE 8 6542 - 7537 1410 331 aa, chain + ## HITS:1 COG:Cgl1873 KEGG:ns NR:ns ## COG: Cgl1873 COG0568 # Protein_GI_number: 19553123 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Corynebacterium glutamicum # 5 330 2 330 331 503 88.0 1e-142 MATSSAASVQDEDGQEVDRGSRRNQTNDNPSADLVRVYLNGIGKTALLSAEDEVELAQTI EVGLYAEYKLANAEKLTRAEKRDLKILAREGKKARSHLLEANLRLVVSLAKRYTGRGMPL LDLIQEGNLGLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVN KLSRIKREMYQSLGREATNEELAEESGIEESKIEMLLRQSRDPVSLDMPVGTDEEAPLGD FIEDAEATDAETAVVASMRHSDIRSVIGSLEEREQDVIRLRYGLDDGVPRTLDQIGRKFG LSRERVRQIEREVMAKLREGNRADRLREYAL >gi|227860837|gb|ACLH01000083.1| GENE 9 7829 - 8509 556 226 aa, chain + ## HITS:1 COG:Cgl1874 KEGG:ns NR:ns ## COG: Cgl1874 COG1321 # Protein_GI_number: 19553124 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Corynebacterium glutamicum # 1 225 1 225 228 292 69.0 3e-79 MRDLVDTTEMYLRTIYELEEEGITPLRARIAERLEQSGPTVSQTVARMERDGLLHVRTDR SLDLTQQGRELATNVMRKHRLAERLLTDVLGLDIHKVHDEACRWEHVMSEEVEKRVVAVL EDSSRSPFGNPIPGLGQLGLSPAELDLGTRAIDLPTGQETEATIVQINEVLQADNSTFHD LYACGIQVGSHVTVVNESGTIRLTTTSGHTVELVDDLAHAIRVKED >gi|227860837|gb|ACLH01000083.1| GENE 10 8515 - 9498 922 327 aa, chain + ## HITS:1 COG:Cgl1875 KEGG:ns NR:ns ## COG: Cgl1875 COG1087 # Protein_GI_number: 19553125 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Corynebacterium glutamicum # 1 327 1 327 329 517 79.0 1e-146 MKLLVTGGAGYVGSVCAAVLVEKGHDVTIIDNFSTGNREAIPEKARLVEGDVADVAREVL SEGGFEGVLHFAARSLVGESVEAPADYWQHNVVTTLKLLNAMREFEVTNLVFSSTAATYG EPAQVPITETMPTQPTNPYGASKLAIDYMITSYAQAYGLGATSLRYFNVAGAYGDIGENR EVETHLIPLVLQVALGHREKIFIFGDDYATADGTAVRDYIHIRDLAEAHVLALGSNSAGT HRIYNLGSGDGYSVKQVIEACREVTGHPIPAELAPRRAGDPATLVASSDKIKSELGWNPI RTDLKTIVTDAWNFTRQLGERAHSARR >gi|227860837|gb|ACLH01000083.1| GENE 11 9455 - 10489 453 344 aa, chain - ## HITS:1 COG:no KEGG:cauri_1464 NR:ns ## KEGG: cauri_1464 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 344 39 382 382 656 100.0 0 MAIDTTPRGPAMGPLARVDITDAQGAITDIAPLLAEHAREGVFAFLISKQSLTELREVSH WLYGLDRAEDGVEIDAAWYAQEITQNAPYVLLHGTVNADGSGPMKKWVEGTIPALTDAPS MRSCVDHNVVPELNREDFFAVFAPGNSYLDAEEAEVLAQQARDTAARFREQVAVAQGKKR KDLLDHFLEDAQWALDQVASAEEAEQDSKLLESCAVWLATTWTRDLVVDICAKSGETGAT LLLAAARTFGGELRANALTLFALAQLEQEWDILAGPALQLVTEEFPSHRLGALLCQAYRH GLHEKIRDSIHTGALKAYDTALGEEPAEKTLSAERNEPARRAAG >gi|227860837|gb|ACLH01000083.1| GENE 12 10957 - 11976 1148 339 aa, chain + ## HITS:1 COG:no KEGG:cauri_1465 NR:ns ## KEGG: cauri_1465 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 339 1 339 339 634 100.0 1e-180 MQEEQRRMYELEYPAPVVKDDSTPDNGPTMIVAMNGYADAGQAVEASADHLKAALENRQL ASFNNDELIDYRSRRPAVTIDHDRTVEIENTDLGIKVLRDNSGTPFLLLSGPEPDLRWEA FTDAVVNLVEKFDIKNTIMLYSAPMPVPHTRPTVVTAHGNSPELLNSMVRMESTMMVPGA AALYIERALDKKGRRVAGYTAHVPHYLAASPYPSATLRLLDSVASAAGLNIPLGSLEADV TRVNQQLEEQVTNSEEIAGVVHQLEEQYDAYMERYRSRHPQAIMPGEEHMPTGEEIGADF EAFLAGLDENPDILSEEIDDREDNYGREQGPGSDMDDDI >gi|227860837|gb|ACLH01000083.1| GENE 13 12127 - 14652 2391 841 aa, chain + ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 1 841 21 849 850 1249 73.0 0 MVDEAIWDTFLSWTSGRGISLYPAQEEASLGILAGDNVILATPTGSGKSMVANAAHFIAL ARGQRSFYTAPIKALVSEKFFALCEIFGPENVGMMTGDATVNGSAPIIAATAEIVANIAL RDGAEAAIDQVIMDEFHYYSEPERGWAWQVPLLELPKAQFLLMSATLGDTAWLEKDLTER TGRTTTLVAGTTRPVPLDFSYVFSAVHETIEELLADGKAPVYVVHFSQREASDRAQALTS LSKIITPEEKEAIAAELAGFRFTTTFGKDLSKLLRKGIGVHHAGMLPKYRRLVERLAQKG LLKIICGTDTLGVGINVPIRTVLMTGLAKYDGTRQRILKSREFHQIAGRAGRAGYDTEGT VVVQAPEHEIENAKARRRVGDDPARLKKLKKKSARDGEVSWSEQTYARLIDAEPEQLTSQ FRVSNSMLLNVLARHGNGYEHLKHLLRTSHNTRARQNEDILTALSLFRGLLNSGVVQKST KGLDIYGRPYHVVREMPRDFALNQPLGPFALAALTLLDPDSDTYALDVISVFEAVLDDPR QVLIAQQKQRRGEEIAALKAEGVDYTERMAIVEEITWPKPLEELLEQSYETFCQTNPWAK EFELRPKSVVRDMLESAMTFSDLVATYGLARSEGVILRYLTDAWRTLKQSIPAEFLTEEL EDIIVWLGELIRQVDSSLVDEWAELAGEDSPISQEDLDRELAFGVEDPTALTANQRAFSI MVRNYFFRLAQLFALEKEERLADLLDYLEEIPDFGRALDDYFDDYEDIDTGPAARGQEYF VLDKGDTSSGVRGVGGSRSWTVRQILKDPEGDNSYQLVGTVDLDASDEVGEVRLSELRVE Y >gi|227860837|gb|ACLH01000083.1| GENE 14 14733 - 15857 1133 374 aa, chain + ## HITS:1 COG:SA2357 KEGG:ns NR:ns ## COG: SA2357 COG3641 # Protein_GI_number: 15928149 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Staphylococcus aureus N315 # 27 371 7 349 351 166 34.0 9e-41 MSTPQQIDERKLSPIPHASGAPAAERLTPGSFTMKVLNGISIAVVVSLVPQALLGELAKA LLPLWSGASTVIALTGLAASLLPVMIGVLVGIEFKMTPIQTAAVGIASFCGSGVATVNPE GGFFLKGTGLVINSGITAAIAVGLLLFIGDRLKNYSILLLSTIVTLVAGTIGWAVTFPIV KVFTLWLGNLVNGATTLQPVLMGVVLAVLFAIMIVSPVSTVGIATAIFIDGIASGTANLG AVAAGFTLLVAGWRVNGFATSILHVLGSPKVQMANMLSKPVTFLPVICSAAVLGGVGGAL GISGTPISAGFGISGLMGPLAALNYEGWGWSAGNVMIITFVYVILPLALALLFCWLFEKV LHLTRAEYFSLDFK >gi|227860837|gb|ACLH01000083.1| GENE 15 15886 - 16263 334 125 aa, chain + ## HITS:1 COG:no KEGG:cauri_1468 NR:ns ## KEGG: cauri_1468 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 125 1 125 125 234 100.0 7e-61 MNPQNSPATSIRLAGVHFETHEDAVTVHWLLGGMPHHRDVVFTLHTLDLELTAHFEQEQL TSMEISSFGEDTRDAHRRVDYPYEYTPEELTVTLPTAHFNLSEEVFTMALSVDGAACGEW TGTII >gi|227860837|gb|ACLH01000083.1| GENE 16 16406 - 17116 671 236 aa, chain + ## HITS:1 COG:Cgl2891 KEGG:ns NR:ns ## COG: Cgl2891 COG1814 # Protein_GI_number: 19554141 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 5 235 11 240 240 200 59.0 2e-51 MPQHISEPHGASHNARLNSLRAGVLGANDGIVSVAALLLGVVGSGASASAILTAGLAATV SGAASMALGEYVSVSAQRDSERMMIDKETRELADLPEQEHAELVSMLASYGMHTETADTA AREIAAEDRLLEAHLRLEMGIDGEDLTNPWHAAFWSAVSFLAGAALPLLSIFLAPMSMAA ATVAIVTLIALAITGYVSARLADTDAARSVFRLVIGGALGLAITYGIGVAFGGVIG >gi|227860837|gb|ACLH01000083.1| GENE 17 17245 - 17778 665 177 aa, chain - ## HITS:1 COG:MT2504 KEGG:ns NR:ns ## COG: MT2504 COG2128 # Protein_GI_number: 15841950 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 168 1 168 177 176 59.0 2e-44 MSIENLKSALPAYAKDQKLNIGSLTRSTELNEEQLWGSLVAAAAATRNDLVLSEILEEAR EHLSEEAVDAALGSATVMAMNNVAYRAKSWLGDDFAQVKFGLRMNIIAKPGVDKATFELW STVVSAINGCEHCLSAHANTLLEEGVTKEQIWEGIKVAGVVEAVAQALQAEAVRSAE >gi|227860837|gb|ACLH01000083.1| GENE 18 17823 - 18416 897 197 aa, chain - ## HITS:1 COG:MT2503 KEGG:ns NR:ns ## COG: MT2503 COG0450 # Protein_GI_number: 15841949 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium tuberculosis CDC1551 # 1 196 1 194 195 268 64.0 4e-72 MPILTVGEKFPEFELTALKGGDLHDVNANQPEDYFEQVSLDKYQGMWKVVFFYPKDFTFV CPTEIAAFGKLNEEFLDRDTQVLGGSTDNEFAHFNWRATHPELKEVPFPMFSDIRHDLIR ALGVENADGVADRATFIIDPDGVIQFVSVTPDAVGRNVDEVLRVLDALQSEEVCACNWEA NDPTKNIDKLEVVKSAL >gi|227860837|gb|ACLH01000083.1| GENE 19 18590 - 19549 1049 319 aa, chain + ## HITS:1 COG:Cgl1879 KEGG:ns NR:ns ## COG: Cgl1879 COG0583 # Protein_GI_number: 19553129 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 308 1 308 327 372 66.0 1e-103 MNNKEYRPTLAQLRTFVTIAENKHFGTAAAKLDISQPSLSQALVALEQGLGVQLIERSTR KVIVTSTGEALLPYAKAALEASDAFLSQARGASGTLNGPLTIGIIPTIAPYILPGLLQSI SETYPDLEPRFVEEQTQHLLDKLREGNLDLAIVALPTEAPGMVEIPLYSETFTAVTPAEH PLAGRKDLTLEDLGHLDLLLLDDGHCLRDQVLDLCRRAKVNPSEATNAVTRASSLTTILQ LVMGNLGATLVPESALATECQNPRLSVAHFAPSVTAERHVGLVFRSSAARADEFSAFGTL VTAAFHDAAERSRTLFTAS >gi|227860837|gb|ACLH01000083.1| GENE 20 19656 - 20723 1353 355 aa, chain - ## HITS:1 COG:Cgl1880 KEGG:ns NR:ns ## COG: Cgl1880 COG5473 # Protein_GI_number: 19553130 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 10 353 4 359 363 91 30.0 2e-18 MTNPFESNPEDNGSNRGFGSNPAHNSGDSSGNNGGLPKYEPTSHPEDQAGFGQSSSYGNY GGGAYGSQSYGGYEAGQPGYAGAGYGSDSSYEGPGPGAGPAYTGPVSAIEAIKWGFKAAL SNALLWVLGAVVVFAIQFVPQIGISVGAQNADGAETSVMVDLFSFAVSILSFVIALVVYR LAYREIDKPSPTWGTLFQGVRWVPPLVVNIVLGILGAIVLVIVIVGLFMVGLGGVAGVDL QNPEQLSENDIFALVGSIFGGVIIVMLIALFIQPFFTLMPWLAADSSSVGEAFSQGLKLG KENYGHILLFIVLSGLMAFASLITLGLALIIIAPALQLATAHLCRQCQGRYAPAA >gi|227860837|gb|ACLH01000083.1| GENE 21 20832 - 24707 3524 1291 aa, chain + ## HITS:1 COG:Cgl1881 KEGG:ns NR:ns ## COG: Cgl1881 COG1643 # Protein_GI_number: 19553131 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Corynebacterium glutamicum # 4 1291 9 1302 1302 1837 71.0 0 MTATREDLYGALTSVSLSDERAFRRRLRKARSPKALNAIGADIAAAQDKVRTIDAHVPPI TYPEQLPVTGRRDDIAEAIENNQVVIIAGETGSGKTTQIPKICLELGRGRRGLIGHTQPR RLAARTVAERIAEELDQSIGDSVGYAIRFDDRVSSTTAVKLMTDGILLAEMQRDRFLNAY DTIIIDEAHERSLNIDFLLGYLKRLLPKRPDLKVIITSATIDPERFAKHFADAHGEPAPI IEVSGRTYPVEIRYRPLEVESGGKTIDLDPLDTLCEAIEELMVEGEGDILCFFPGERDIR DAMEAIEGRHWRNVEVTPLFGRLSNQEQHRVFRSHRGRRIVLSTNIAETSLTVPGIRYVV DTGTARISRYSTRTKVQRLPIEPISQASANQRSGRCGRVADGIAIRLYSEQDFLSRPEFT DPEILRTNLASVILQMISLRLGDIADFPFVQSPEPKAVRDGLLLLHELGALEGKEKDGLP VLTRIGRNLARIPVDPRMARMLVEANTSGCLHDVMVIVAAMTIQDVRERPTDKQAQADQA HARFKDKSSDFMAMLNLWDFVQEAREEMSGNAFRKRMKADFLHYMRIREWFDLVRQLRDV AKQLGWNAQEGTERRPDDIHMSLLSGLLSNIGARDGNSKEFIGARNTRFLVFPGSALAKK PPEFLMAAELVETSRLWARDVAAIDPAWVEKLAKDLLKHNYSDPTWSRKRGSGVVTQRST LYGVTVVADRTVPYHRVDPAAARDMFIRNALVDGEWTTHHHFFHDNKRKLDEASEYEEKA RRRGLVVDEDTLFDFYDQRIPETVTTARHFDSWWKKQKNKHSLDFDPETLLEEDHAVTEE AFPDRWLKGSIDYDLSYKFEPGDPLDGVTLMVPVPLLAGLDSEGFDWLVPGLRLELVTEL IRSLPKALRRTVVPAPEFAERALPKLVPYEGGLCEQLAAVLQDMGGHGINAGDFRPDQLP PHLRMNYAAVDKRGKVIDSDRDVQALVQRQAGHISSSVSRVGRAAESASVKEWSEDTLGA IDEEVTTVVDGHEVTAYPALVATKEGVALKVHPTKAAADASMITATLTLLLREISVNTQQ MVKGLPLQQRVAVDSYPHGGADGLVNDARVAAVRDIMMDKGGPVRTPEEFTDLLNAVKPE VPGRVRQAVVAIAPGLAEYSNLNAELKHWEGPAIDDIRAQLDFLLPPHAITVHGIQHLRH LPRYIQAARIRLDDMNLDPDRDADRQADVDEAKAYLKNRLRSLPAGREKTREVKEILWMI EELRVSLFAQRLGTAHAVSVRRIQKAADKLR >gi|227860837|gb|ACLH01000083.1| GENE 22 24704 - 25162 276 152 aa, chain - ## HITS:1 COG:Cgl1882 KEGG:ns NR:ns ## COG: Cgl1882 COG1327 # Protein_GI_number: 19553132 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Corynebacterium glutamicum # 1 150 1 150 150 225 81.0 2e-59 MYCPFCHNEQSRVIDSRVIDSGTSIRRRRECAACKGRFTTIEKAVLSVVKRNGLAEPFSR DKLIRGVKRACQGRDVSDDALKKLAQEVEETVRSHGSSQVNANDIGLAILEPLRDLDEVA YLRFASVYKSFESADDFESEIRLMRRRDRDSF >gi|227860837|gb|ACLH01000083.1| GENE 23 25218 - 25625 192 135 aa, chain - ## HITS:1 COG:no KEGG:cauri_1476 NR:ns ## KEGG: cauri_1476 # Name: divS # Def: cell wall hydrolase interfering with FtsZ ring assembly # Organism: C.aurimucosum # Pathway: not_defined # 1 135 1 135 135 183 100.0 2e-45 MAIALNSASVLRRDVRRKSHSVAVLVPPAAIWDPVQNQTRAHSSSHASSCGTPGVRTLSS EGRTQGRTMNSETPFVSSRRSVSRSRRGGSNVGNYVLGAVFGAAVFIGTVWGGLSIDSEV PNAHGASATAEATSR >gi|227860837|gb|ACLH01000083.1| GENE 24 25914 - 26636 846 240 aa, chain + ## HITS:1 COG:Cgl1884 KEGG:ns NR:ns ## COG: Cgl1884 COG1974 # Protein_GI_number: 19553134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Corynebacterium glutamicum # 11 240 27 253 253 301 69.0 7e-82 MARKPKRSDHPSLDTLSARQRRILEVIHDAVMLRGYPPSIREIGDATGLQSTSSVAYQLK QLEEKGFLRRDPNKPRAVDVRHFPGGEDSKKPGRKTGQANKSPDLSTPDIPEDAATPNYI PVVGRIAAGSPITAEENVDAYFPMPGEILGSGELYMLQVVGDSMQDAGILNGDWVIIRSQ SVAEEGEFVAALLDGEEATVKEFHRDSSGVWLLPHNDAYSPIKGDEAEIMGKVVSVFRKL >gi|227860837|gb|ACLH01000083.1| GENE 25 26669 - 26914 82 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRRCLHCPTECEENGTKQRKTHITGAVLVKEFRYNLRICKCVMSDAKAVGIGHVHTQGG KKKQSPGPLRPHRVRLVLRGG >gi|227860837|gb|ACLH01000083.1| GENE 26 26827 - 26994 71 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSACGGHCARRGKETGLGRVNEKGNECCGDASIVPLNVKKTELNKEKLTLRVLS >gi|227860837|gb|ACLH01000083.1| GENE 27 27006 - 27788 669 260 aa, chain + ## HITS:1 COG:Cgl1885 KEGG:ns NR:ns ## COG: Cgl1885 COG1349 # Protein_GI_number: 19553135 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 257 1 258 259 342 76.0 6e-94 MYAEERRRQIASLTAVEGRVNVTELSERFDVTAETIRRDLAVLDREGVVHRVHGGAVASQ SFQTAELTLDTRQRSATGAKMAIARAALEQLPDGGSIFLDAGTTTNALADLIGQRYSAGQ FSIVSNSLPIALSLASNGVSEVQLLGGTVRAITQAVVGDTALRTMALMRADVAFVGTNAL TIDHGLSTADSQEAAIKSAFVTNAHRVVVLCDSSKLGNDYLVSFASLDEIDVVITDAGAP ASYVEALREHGVEVIIAAEK >gi|227860837|gb|ACLH01000083.1| GENE 28 27871 - 29565 1502 564 aa, chain - ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 7 554 11 560 568 675 69.0 0 MENASPSTIKGTGVVAGVAYAEAVWVRPRPELPTAGETVAEEQRDAEYDHFLEAADIVAS RLEQRAAGAEGQAAEVLGATAGMVKDRGWHKAVRKGIRSGKNAEYAVVGATDRFVTMFEA AGGVMAERTTDLKDVRDRVIAQLRGEQEPGLPMVEGEAVLLADDLAPADTATLDTTHIKA LVTELGGPTSHTAIIARQLDLPCIVAVGAELRTIEAGTQIFVDGSVGTVTLGADRTASLK AVEEYREKAARVAEWRGPAQTKDGHRVQLLANVADGNAARIASDSQAEGIGLYRTELSFL SASEEPTVEEQARIYGKVFNAFPDSKVVVRTLDAGSDKPISYATLDSEENPALGVRGLRI ARDNEALLTRQLDAIAQAAEKRAEGATTWVMAPMVATAVEAKWFAELCRERGLTAGAMIE VPAAALMADTILPHLDFVSIGTNDLTQYTMAADRLSPQLAYLTDPWQPAVLRLIQHTCVV GRDNNVPVGVCGEAAADPMLACVLTGLGVTSLSAASTAVAGVGAQLAEVTLEQCQKMADA AVNAEGPADARAAVIDLLEQFQAS >gi|227860837|gb|ACLH01000083.1| GENE 29 29610 - 29687 77 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIIARMCPNVNGITVGFVAFLTDL >gi|227860837|gb|ACLH01000083.1| GENE 30 29804 - 30775 863 323 aa, chain + ## HITS:1 COG:Cgl1890 KEGG:ns NR:ns ## COG: Cgl1890 COG1105 # Protein_GI_number: 19553140 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Corynebacterium glutamicum # 1 323 1 326 330 301 54.0 1e-81 MILTLTPNPSIDATVRLNEELEPGAVHRAGSVSSVAGGKGVNVTHAVTLANVDSLALLPA VASDPFLALAADASIPVHAVPTHGAVRTNTTLTEPDGRTTKLNGPGPTLEADVQQAVAET LAEHCAHAEWIVMAGSLPQGVPTDWYTQLICVAREANPDIRVAVDTSDAPMVALGENLET ASPDLIKPNGLELGQLANVDGQALEAAAENGDFSGVVKAARVVVKRGIPEVLVTLGGAGA VLVTADEAWAATPPPITLRSTVGAGDSSLSGYILARRSGASYSEALRQAVAYGSAAAALP GTQIPTPEELDIEHTTVSAVTDL >gi|227860837|gb|ACLH01000083.1| GENE 31 30798 - 32882 2306 694 aa, chain + ## HITS:1 COG:Cgl1891_3 KEGG:ns NR:ns ## COG: Cgl1891_3 COG1299 # Protein_GI_number: 19553141 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Corynebacterium glutamicum # 319 693 1 375 378 487 77.0 1e-137 MSSQLITTDLVALDANFGDSIESVITNLATLVHDTGRATSVEELAGPAIEREAKAGTGVP GGVAIPHCRSAAVSEPTLAFARLSRGVDFSGPDGDAYLVFLIAAPEGGGKAHLKILSKLA RALVKKDFLEALRTAQTKEEIVSLVLDVVNAEKPKKKAAASESAPAAAAAAPAPSKAADS QKTRIVAVTACPTGIAHTYMAADALTQTAEERHDVELTVETQGSSNNTAVSADTIAAADA VIFATDVGVRDRERFAGKPVVESGVKRAINEPGVMLDEAIAASKNPNAHKVAGTAGAASS SSVEEGEGLGWGKRIQQAIMTGVSYMVPFVAAGGLLLALGFLFGGYDMANGWQAITSDYS LTNLPGHDVMVDGEMMTFKKAGFALYIGAVLFAIGQASMGFIVAALSGYIAFALAGRPGI APGFAGGAIAVTLGAGFIGGLVTGLIAGFVAMWIGKWKVPRWIGSLMPVVIIPLLATMVT GLLMYLLLGAPLAAIMEGLQNWLSSMSGSSAVLLGIILGLMMCSDLGGPVNKAAYLFATA GLSTGDEASMKIMAAVMASGMVPPIALSIATFVRKNLFTPAEQENGKSAWLLGLSFVSEG AIPFAAADPLRVIPSMMLGGAVTGALSMSLDVMSRAPHGGIFVIFAIEPAWAYFVAILAG VIVSASAVIAMKQFWPNKAAEEAAAKADKAKAAA >gi|227860837|gb|ACLH01000083.1| GENE 32 32941 - 33210 474 89 aa, chain + ## HITS:1 COG:Cgl1892 KEGG:ns NR:ns ## COG: Cgl1892 COG1925 # Protein_GI_number: 19553142 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Corynebacterium glutamicum # 1 88 1 88 89 85 79.0 3e-17 MASKTVKVGSSVGLHARPASIIADAAAEFDEDIFLTLVGDEDEDETDAASSLMIMALGAE QGDEVTVTSENEAAVEKIAGLIEQDLDAS >gi|227860837|gb|ACLH01000083.1| GENE 33 33574 - 34854 635 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 25 413 9 420 447 249 36 3e-65 MSNFGWAVHGDGKTIKPGAVVAPEERLSWGRTIGIGMQHVVAMFGATLLVPTLTGFPVNT TLLFSGLGTILFLLITRNRLPSYLGSSFAFIAPLSASQQYGIGAQAGSVLVTGLVLVAIG FAVKAAGRKVLDAVMPPAVTGAIVALIGLNLAPNAASNYSSQPLVATVTLAVIILATVAG RGMVSRLSILIGVVVGWAFAAATGNLGEGAVESIREAAWIGFPQFHAPEFHVSAIAAALP VLVVLIAENVGHVKAVSEMTKRDLDDLAGDALIADGLATSLAGGFGGSGTTTYAENIGVM AATRVYSTAAYWVAAITAIALAFIPKFGALIFTIPTGVLGGACIVLYGLIGMLGVRIWMD NKVNFNNPVNLTAAAVALIAGIGNLTLDVFGVTLEGIAWGSVGIIVLYPVMKKLYGTIGE GRGAKY >gi|227860837|gb|ACLH01000083.1| GENE 34 34889 - 36367 649 492 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 96 473 43 413 425 254 42 7e-67 MTKETHDVLLAQAFGEPAPSSQEPTTGDLDLAERNAFRRVTRETTIRAEDTTDGYEVEYR KLRLEQVVLVGVWTEGTVAEVEATMSELAALTETAGAEVVEALYQKRDKPDPGTYIGSGK VNELKDIVAATGADTVVCDGELTPGQLSALERALNTKVIDRTMLILDIFAQHAKSKEGKA QVSLAQLEYLYTHTRGWGGNLSRQAGGRAGSNGGVGLRGPGETKIETDRRRIRTQMALLR KELKAMKTAREIKRSRRASSTIPQIAIAGYTNAGKSSLINAMTGAGVLVEDALFATLDPT TRRAELADGRQVVFTDTVGFVRHLPTQLVEAFKSTLEEVLSADLMLHVVDGSDPFPLKQI EAVNAVIYDIVKETGEDAPPEIIVINKIDQADPLVLAELRHALDRDNVVYVSAKTGEGID ELTTRVELFLNSRDEHVQLLIPFTRGDVVDRIHTQGTVRSEEYTGEGTLVDVRLPASIAA ELSEFRVSGEDT >gi|227860837|gb|ACLH01000083.1| GENE 35 36475 - 37269 822 264 aa, chain + ## HITS:1 COG:no KEGG:cauri_1485 NR:ns ## KEGG: cauri_1485 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 245 1 241 260 464 100.0 1e-129 MPDTMVRMTVKETTHPEMQAIGLNYERWQDAVEAAISTNQLAVTGEVRGGQLIQFTDPSG AQLNILAVEPFATFIGFEGVTQGFAHVSMINDVLAYLDIIDPFGNVLSQATANLAQGPLL ADEDTQQWQQVELTAMGLDITAFASTDAYEAEKGSYPAMFESTGAAIVAAGSGSESPTPG CTFSARVMESEWRHNQLTGERFMHLVMDGAFPFDLCLPESFGELPPKDSVLAGSAMLTAS IALPTGGCGGEGGCACGSGGCGGH >gi|227860837|gb|ACLH01000083.1| GENE 36 37290 - 37823 396 177 aa, chain + ## HITS:1 COG:no KEGG:cauri_1486 NR:ns ## KEGG: cauri_1486 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 177 1 177 177 286 100.0 2e-76 MSFSAPQRRGLALLLAVVTAAVLILTLKLPGVILAAFVCGALWLFADARPNASEHAALRA SIALTVEDITGVLEDYATFATSDDAESLADRTLHRPALVDVDCANPTIEAFHYEMHGAQR FLRRLDARVNSPHAETAELESLLKVADERAAELKEAWLAARRAALALGTNYKKEDGR >gi|227860837|gb|ACLH01000083.1| GENE 37 37841 - 38677 678 278 aa, chain - ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 1 278 5 277 277 292 58.0 6e-79 MKFAKGHGTENDFVIVEGTGPLPPEKVVALCDRRAGIGADGVLRIIRAGELLASGEIDEL APGINADDWFMDYRNADGSVAEMCGNGTRVFAHWVRSRGLLEEDTFTVGTRAGAKQVTVH SFSETEAEVSVEMGPAQVLGVSTASMAGESFAGLGVDMGNPHLAAVIPGLTAEDLAAKRL EQPVFDADFFPAGVNVELVTPLCDGVIHMRVFERGSGETRSCGTGTVAAACAALADASQV TGHVRVIVPGGEVEVEITEDGSTLTGPSRIVATGETSL >gi|227860837|gb|ACLH01000083.1| GENE 38 38689 - 39615 465 308 aa, chain - ## HITS:1 COG:Cgl1899 KEGG:ns NR:ns ## COG: Cgl1899 COG0324 # Protein_GI_number: 19553149 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Corynebacterium glutamicum # 10 305 3 298 301 444 76.0 1e-124 MTNTHPHAPTPIAVVGPTASGKSALGVALAHELDGEVVNVDSMQLYRGMDIGTAKLTLEE REGIPHHQLDVWDVTETASVARYQSSAIADIESIRARGKTPILVGGSMLYVQSLVDDWQF PPTDPQVRARWEARRQEIGTDALHAELAHVDPAAAEIIEDKDPRRTVRALEVIELTGKPF KASQPPKDAPPRWGTRILGLRTEASWLNPRIELRSRLMFDKGLVEEVESLQTRGLKAEST AGRAIGYAQVLQAQRGELTWEEAVERTITGTRRYVRRQRAWFNRDKRIHWLDAAADTSTQ ALRVLEGR >gi|227860837|gb|ACLH01000083.1| GENE 39 39615 - 40247 389 210 aa, chain - ## HITS:1 COG:no KEGG:cauri_1489 NR:ns ## KEGG: cauri_1489 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 210 1 210 210 373 100.0 1e-102 MQNLMVMPASPALAEELSPGDDASRALLAAACELARDAARISGSGPLKVDIVGSRDTRWR TEHTGSLRAWGAPQVDVGGGNFLPEIMARYVLCHALVQASEEPGFVVEDSRAELGEVRPG HLTVVCVDGSAGLTERAPLAHVDGARDAHLWCESVLAGGEVHCDEERLRSAGVLETSLWA QLAGVHPRHAELRAADSTLGVGRYVAGWQC >gi|227860837|gb|ACLH01000083.1| GENE 40 40379 - 41695 1650 438 aa, chain + ## HITS:1 COG:no KEGG:cauri_1490 NR:ns ## KEGG: cauri_1490 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 438 1 438 438 624 100.0 1e-177 MSAIPSPGAMPRKGARPGPSASAPAARPVQPAKNDPAKWGRVDADGSVFVKSPEGERKIG EWQAGTPEEGLAHFGARYDDLSTEIELLESRLKAHPDDAASIKTTAAELRDSLPTQAVIG DIAALDKRLSTVIEHSVEAGEQAQADKARRREEAIAKKEKLAAEAEDIAANSTEWKAAGD RIRAILEEWKQIRGIDRQTDDALWKRYSRARDSFNRRRGSHFAELDRNRAAARAKKEELV ERAEAIKESTNWGETARAYRDLMTEWKAAGRAPREIDDKLWARFRAAQDHFFNARNAVND ERDKQFAENAAAKDALIAEYDSQIDPSKSIDTAKAKLRELQEKWEEIGFVPRNQVREYES KISALEKRVSDAEDSQWRRTDPEAQARVAQFQAKVDEFTAQAEAAEAKGNSKKAEELRAQ AQQWQEFADAAAAAVNEK >gi|227860837|gb|ACLH01000083.1| GENE 41 41711 - 42787 764 358 aa, chain + ## HITS:1 COG:Cgl1902 KEGG:ns NR:ns ## COG: Cgl1902 COG0454 # Protein_GI_number: 19553152 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Corynebacterium glutamicum # 15 355 14 338 341 98 26.0 2e-20 MFVQIVAPPGSAHAEPADCLRSFVFDANLAAQEASGDPAASGSPRRVLQRLQGSAESVTY LFGLTTAAMGTAGELGLPVISAAEPSPEIDFDGFIHISLSLLEETDNADIECVLAADLLP LPGEELEPEALGVTRALAREALRLTRQLGRKNAQVGMLYPPDADHTYDPMSQAYLELGFH HKHAERQMYVDIQPTAPVLGAQVWPDYDIPEELLDDVLRLLTVASADAVYGDLSVEPIVW TRQRLKAAHARLRSRKAHTLLIGILERGRVVALTELSRHGDADPEVCEWTLTVTDRDYRR RGLATRAKQHAQYAVAHHWPTVRRAYCSVAQADPAMNALYARLGAHVISASSAYELTV >gi|227860837|gb|ACLH01000083.1| GENE 42 42769 - 43713 415 314 aa, chain - ## HITS:1 COG:XF1732 KEGG:ns NR:ns ## COG: XF1732 COG1902 # Protein_GI_number: 15838333 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Xylella fastidiosa 9a5c # 1 308 58 363 368 269 50.0 4e-72 MGLIVTEGVFPAVTSRAFPGQSGIETPEQIAGWRRVTESVHEAGGRIFMQVMNGGRLSHA SLLEGAEPVAPSAVASGTAVRDFESRKECPVPRALDVEELPRIIGEFRQAARNAIDAGMD GVEIHGANGYLLHQFLSPSSNHREDAYGGSPQNRYRLVEEILRAVAEEIGADRLALRLSP QHNIQGIEETDAADVLATYGGLLRAIEDLGLAYVSFLHAEPTGELITELSTLARANGRTR VILNSGFGQVTQCAEARELVQHGDAVAVGRLAISNPDLVRRWQEQLPITAPDEGTFYTGG QRGYTDYPFYTVSS >gi|227860837|gb|ACLH01000083.1| GENE 43 43887 - 44519 362 210 aa, chain - ## HITS:1 COG:no KEGG:cauri_1493 NR:ns ## KEGG: cauri_1493 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 210 1 210 210 331 100.0 1e-89 MSDDLKQVRDAVAAEKRAARTIELGKHKYALIVAVVAWVAYLVLPYAGEARGWEALFVGG TAEGVRISLMETVSAWLALGGVGILTTATLLTRRTSVALAAWMMVTISFFVNLWGFWYRG GAAEGASIGMYVGAFSTLVAFLVYCQVALRRSPEQLAAAERVREVSGQLDHVGVLQTEAT TELPAEQNPLLIDDRRARAASRYRRQQDEE >gi|227860837|gb|ACLH01000083.1| GENE 44 44541 - 46067 480 508 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000795|ref|ZP_04047796.1| SSU ribosomal protein S12P methylthiotransferase [Brachyspira murdochii DSM 12563] # 15 461 6 437 440 189 27 3e-47 MNSPVINPQPRTYEVRTFGCQMNVHDSERISGLLEEAGYSAAPNGTEPDLIVFNTCAVRE NADKRLYGTLGALKKTKENHPGMQIAVGGCLAQKDKDTVLDHAPWVDAVFGTHNMAALPA LLERARHNDEAQVEIVDALEAFPSVLPAKRESAYAGWVSVSVGCNNTCTFCIVPSLRGKE EDRRPGDILAEVQALVDQGVSEVTLLGQNVNAYGVNFADPDLPRDRFAFSKLLREVGKIE GLERLRFTSPHPAEFTSDVIDAMAETPAVCPQLHMPLQSGSDKVLKDMRRSYRTKKFLGI LDEVREKMPHAAITTDIIVGFPGETEEDFEATLEVVRRARFASAFTFQYSPRPGTPAAEM ENQIPKEVVQERFERLVALQDSIQAEENAKLVGTDVELLVQAEGGRKSAETHRLTGRARD GRLVHFAPVDPAGKDISAEIRPGDVVHTTVTEAGSFFLVADSGVSEHRRTKAGDMSAAGQ TPTTAPIGVGLGLPGVGKPSAPADSCGC >gi|227860837|gb|ACLH01000083.1| GENE 45 46221 - 46970 625 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 246 1 242 245 245 49 4e-64 MNDLSGPMIKMDGVNKYFGDYHALRDINLEIGRGDVVVVLGPSGSGKSTLCRTINRLETI DQGSIAIDGTSLPEEGRELAKLRADVGMVFQQFNLFPHKTIKDNVTLGPIKVRKMKKSEA EERAMQLLDRVGIANQADKYPAQLSGGQQQRVAIARALAMRPKVMLFDEPTSALDPEMVN EVLDVMTDLAKEGMTMVVVTHEMGFARRAADRILFMADGSIVEDTDPESFFTNPQSERAK DFLGKILQH >gi|227860837|gb|ACLH01000083.1| GENE 46 47033 - 47917 1240 294 aa, chain + ## HITS:1 COG:Cgl1906 KEGG:ns NR:ns ## COG: Cgl1906 COG0834 # Protein_GI_number: 19553156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 3 294 5 294 295 376 69.0 1e-104 MSRTFHRITATIAAVAASSALLVACGDSSDSASGGDGLLASIESGSVTLGTKFDQPGLGL REGDGSMTGLDVDVATYVVNHIAKDKGWEEPEIEWRETPSAQRETLIENGEVDLIAATYS INASRAEKVNFAGPYLITHQALLTQNDNKDITGLEGLDGKILCSVTGSTPAQKVKEALPS VQLQEYDTYSSCVEALSQGNVDAMTTDATILNGYAAQNPGKFQVVELEKDGKPFTDEYYG VGLKKDDQEATDAINKALEELHSSGEFDKLVSKNLDKGEGIDEATIGDLSFLDS >gi|227860837|gb|ACLH01000083.1| GENE 47 47994 - 48680 893 228 aa, chain + ## HITS:1 COG:Cgl1907 KEGG:ns NR:ns ## COG: Cgl1907 COG0765 # Protein_GI_number: 19553157 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 1 228 1 228 228 310 79.0 2e-84 MESMWAALGPELWPAFWLTIQLTFWSAIGAMLLGTILTAMRVSPVGILRWIATTYITTVR NTPLTLIILFCSFGLYQNLGLTLASKDSSTFLVDNNFRLAIVGFVLYTSAFVAESLRSGI NTVDFGQAEAARSLGLSFSQTFSTIIFPQAVRAAIVPLGNTLIALTKNTTIASAIGVAEA SLLMKSTIEMHASQLFLIFFIFAAGFIILTLPMGVGLGKLSETLAVKK >gi|227860837|gb|ACLH01000083.1| GENE 48 48680 - 49618 935 312 aa, chain + ## HITS:1 COG:Cgl1908 KEGG:ns NR:ns ## COG: Cgl1908 COG0765 # Protein_GI_number: 19553158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 3 311 5 313 315 411 69.0 1e-115 MAVRATVLYDAPGPKGKRRNLIYTIITAVLSVAVLYWVLSTLGERGQLDSALWTPFLNNQ TWTTYLLPGLRGTILSAAASIVLAIVFGIIFGLGRLSENVFVRGLCGVVVEFFRAIPVLL LMIFAYQLFAIYDVVPSKQLAFSAVVFALTLYNGSVVAEILRSGIKSLPKGQTEAARALG LSHGQTMRTILLPQAVAAMLPALIAQMVIALKDSALGYQIGYVEVVRSGIQSASYNKNYL ASLIVVAIIMILINWGLGLLAERIEAQLRAGRARRNIIAKVPEQPGQGLDTKDQVNVDWH SENYTEIRNPAE >gi|227860837|gb|ACLH01000083.1| GENE 49 49639 - 50232 515 197 aa, chain - ## HITS:1 COG:Cgl1909 KEGG:ns NR:ns ## COG: Cgl1909 COG2137 # Protein_GI_number: 19553159 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 7 196 22 213 215 144 54.0 9e-35 MPQPSPEKLEKLRHALEAYESGDAGGQLIDAEAEAAKAPVRSRALGLLDQRARSRKELRD RLVAADFEPDVVDTVVDDLAGAGLVDDEAFAKEWVRQRHARRGKSARALNLELKEKGVEA ADRAIALEQITEESEEAVARQVAEKKARTLKRAPADRHERDKFLRRIVGTLARRGYSQEL VMRISIEVLDARIAELS >gi|227860837|gb|ACLH01000083.1| GENE 50 50242 - 51375 1473 377 aa, chain - ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 13 377 15 367 376 580 86.0 1e-165 MATKKKSSAANKGDDRQKALDAAMAMIEKDFGKGAVMRLGDDDRPPIQAISSGNTAIDIA LGVGGFPRGRIVEIYGPESSGKTTVALHAIASAQKTGGIAAFIDAEHALDPEYARLLGVD TDNLLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAALTPKAEIEGEMGDSHVGLQARL MSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDIRRIQT LKDGQDAIGNRTKLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVEHGFIKKSGSW FTYEGDQLGQGKEKARNFLKDNPDLADEIEKKIFVKLGVGAAAAEAGEDVAMDVPGADDP LTDEAVDLVPNVDFDDD Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:56:39 2011 Seq name: gi|227860836|gb|ACLH01000084.1| Corynebacterium aurimucosum ATCC 700975 contig00165, whole genome shotgun sequence Length of sequence - 79613 bp Number of predicted genes - 81, with homology - 80 Number of transcription units - 34, operones - 17 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 407 221 ## cauri_1502 hypothetical protein 2 2 Op 1 7/0.000 + CDS 519 - 1094 508 ## COG1268 Uncharacterized conserved protein 3 2 Op 2 34/0.000 + CDS 1100 - 1792 299 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 4 2 Op 3 . + CDS 1796 - 2410 525 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 5 3 Op 1 2/0.000 - CDS 2414 - 3250 1209 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription 6 3 Op 2 2/0.000 - CDS 3356 - 3742 403 ## COG1396 Predicted transcriptional regulators 7 3 Op 3 6/0.000 - CDS 3749 - 4234 206 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 8 3 Op 4 . - CDS 4231 - 4830 265 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Prom 4717 - 4776 2.5 9 4 Tu 1 . + CDS 4860 - 5159 487 ## COG2350 Uncharacterized protein conserved in bacteria + Term 5212 - 5255 -0.8 - Term 4958 - 4993 3.3 10 5 Tu 1 . - CDS 5177 - 6295 1298 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 6315 - 6374 2.2 - Term 6321 - 6347 0.1 11 6 Op 1 . - CDS 6475 - 9693 2682 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Term 9714 - 9750 -0.6 12 6 Op 2 . - CDS 9771 - 10412 226 ## cauri_1513 hypothetical protein 13 6 Op 3 9/0.000 - CDS 10456 - 12525 2526 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 14 6 Op 4 4/0.000 - CDS 12528 - 13436 709 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 15 6 Op 5 1/0.467 - CDS 13508 - 14257 487 ## COG1351 Predicted alternative thymidylate synthase 16 6 Op 6 . - CDS 14257 - 15003 661 ## COG0289 Dihydrodipicolinate reductase - Prom 15038 - 15097 1.6 + Prom 15207 - 15266 2.7 17 7 Tu 1 . + CDS 15286 - 16578 1080 ## cauri_1518 hypothetical protein 18 8 Op 1 . + CDS 16758 - 17114 121 ## COG0346 Lactoylglutathione lyase and related lyases 19 8 Op 2 . + CDS 17160 - 17819 208 ## cauri_1519 putative secreted protein + Term 17838 - 17887 -0.5 - Term 17648 - 17677 0.0 20 9 Op 1 26/0.000 - CDS 17916 - 20186 1377 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase - Prom 20258 - 20317 2.6 - Term 20276 - 20312 7.0 21 9 Op 2 1/0.467 - CDS 20327 - 20596 453 ## PROTEIN SUPPORTED gi|227833345|ref|YP_002835052.1| 30S ribosomal protein S15 - Term 20622 - 20649 -0.1 22 9 Op 3 1/0.467 - CDS 20675 - 21592 602 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 23 9 Op 4 . - CDS 21593 - 22573 413 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 24 10 Tu 1 . + CDS 22572 - 23504 610 ## COG0130 Pseudouridine synthase - Term 23340 - 23372 0.4 25 11 Op 1 4/0.000 - CDS 23514 - 24188 570 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase 26 11 Op 2 1/0.467 - CDS 24181 - 25002 552 ## COG1409 Predicted phosphohydrolases 27 11 Op 3 3/0.000 - CDS 25047 - 26345 1289 ## COG0534 Na+-driven multidrug efflux pump 28 11 Op 4 4/0.000 - CDS 26346 - 27308 973 ## COG0618 Exopolyphosphatase-related proteins 29 11 Op 5 32/0.000 - CDS 27309 - 27752 538 ## COG0858 Ribosome-binding factor A - Term 27819 - 27858 9.8 30 12 Op 1 15/0.000 - CDS 27903 - 30620 2488 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 31 12 Op 2 22/0.000 - CDS 30730 - 31065 128 ## COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination 32 12 Op 3 32/0.000 - CDS 31186 - 32202 556 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 33 12 Op 4 . - CDS 32206 - 32772 490 ## COG0779 Uncharacterized protein conserved in bacteria + Prom 32500 - 32559 2.3 34 13 Tu 1 . + CDS 32771 - 33664 788 ## cauri_1534 putative secreted protein 35 14 Op 1 . - CDS 33695 - 34090 368 ## COG4270 Predicted membrane protein 36 14 Op 2 . - CDS 34118 - 35887 2518 ## COG0442 Prolyl-tRNA synthetase - Prom 36103 - 36162 2.7 37 15 Tu 1 . + CDS 35920 - 36642 776 ## COG3022 Uncharacterized protein conserved in bacteria 38 16 Tu 1 . - CDS 36650 - 37963 1114 ## COG1085 Galactose-1-phosphate uridylyltransferase 39 17 Op 1 . + CDS 38015 - 38830 663 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 40 17 Op 2 . + CDS 38823 - 40211 1018 ## COG0397 Uncharacterized conserved protein + Term 40334 - 40373 -0.6 - Term 40228 - 40298 13.1 41 18 Tu 1 . - CDS 40512 - 42014 2130 ## COG0579 Predicted dehydrogenase - Prom 42198 - 42257 2.0 + Prom 42157 - 42216 2.6 42 19 Op 1 2/0.000 + CDS 42282 - 43316 902 ## COG2267 Lysophospholipase 43 19 Op 2 . + CDS 43373 - 44758 462 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 44 20 Op 1 . + CDS 45100 - 45540 880 ## cauri_1544 hypothetical protein 45 20 Op 2 . + CDS 45582 - 45986 736 ## cauri_1545 hypothetical protein + Term 46028 - 46070 8.4 + Prom 46216 - 46275 2.8 46 21 Tu 1 . + CDS 46299 - 46652 617 ## cauri_1546 hypothetical protein + Prom 46659 - 46718 2.3 47 22 Tu 1 . + CDS 46860 - 47135 455 ## cauri_1547 hypothetical protein + Term 47157 - 47217 6.2 - Term 47149 - 47200 16.8 48 23 Op 1 2/0.000 - CDS 47258 - 48112 1134 ## COG0024 Methionine aminopeptidase - Prom 48132 - 48191 2.7 49 23 Op 2 1/0.467 - CDS 48197 - 50068 1575 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 50 23 Op 3 6/0.000 - CDS 50105 - 51268 1435 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 51 23 Op 4 17/0.000 - CDS 51346 - 52554 1254 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 52 23 Op 5 . - CDS 52570 - 53736 1007 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Prom 53838 - 53897 3.1 + Prom 53785 - 53844 3.0 53 24 Tu 1 . + CDS 53929 - 54378 524 ## cauri_1553 putative secreted protein + Term 54400 - 54453 16.3 - Term 54388 - 54441 16.3 54 25 Op 1 . - CDS 54464 - 56053 1149 ## cauri_1554 ABC-type transport system, permease component 55 25 Op 2 1/0.467 - CDS 56050 - 56865 740 ## COG1131 ABC-type multidrug transport system, ATPase component 56 25 Op 3 . - CDS 56943 - 58049 1426 ## COG0820 Predicted Fe-S-cluster redox enzyme 57 26 Tu 1 . + CDS 58143 - 58547 589 ## COG5416 Uncharacterized integral membrane protein + Term 58633 - 58674 0.2 58 27 Op 1 7/0.000 - CDS 58550 - 59404 722 ## COG0575 CDP-diglyceride synthetase 59 27 Op 2 33/0.000 - CDS 59535 - 60092 922 ## COG0233 Ribosome recycling factor 60 27 Op 3 24/0.000 - CDS 60163 - 60891 931 ## COG0528 Uridylate kinase - Prom 60948 - 61007 2.5 - Term 61021 - 61082 3.2 61 27 Op 4 38/0.000 - CDS 61146 - 61958 431 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts 62 27 Op 5 . - CDS 62206 - 63123 1542 ## PROTEIN SUPPORTED gi|227833386|ref|YP_002835093.1| 30S ribosomal protein S2 63 28 Tu 1 . + CDS 63017 - 63274 128 ## gi|227504798|ref|ZP_03934847.1| hypothetical protein HMPREF0308_1068 64 29 Tu 1 . + CDS 63428 - 63934 305 ## COG0739 Membrane proteins related to metalloendopeptidases 65 30 Op 1 1/0.467 - CDS 63897 - 64808 708 ## COG0582 Integrase 66 30 Op 2 2/0.000 - CDS 64824 - 66002 330 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 67 30 Op 3 2/0.000 - CDS 65999 - 67522 286 ## COG0606 Predicted ATPase with chaperone activity 68 30 Op 4 . - CDS 67509 - 67946 285 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 69 31 Op 1 . - CDS 68146 - 68451 456 ## cauri_1568 hypothetical protein 70 31 Op 2 4/0.000 - CDS 68539 - 69180 564 ## COG0164 Ribonuclease HII 71 31 Op 3 2/0.000 - CDS 69186 - 69887 473 ## COG0681 Signal peptidase I 72 31 Op 4 5/0.000 - CDS 69865 - 70653 862 ## COG0681 Signal peptidase I - Term 70713 - 70766 10.7 73 31 Op 5 . - CDS 70783 - 71127 575 ## PROTEIN SUPPORTED gi|227833396|ref|YP_002835103.1| 50S ribosomal protein L19 74 32 Op 1 8/0.000 + CDS 71411 - 73213 2245 ## COG0422 Thiamine biosynthesis protein ThiC 75 32 Op 2 4/0.000 + CDS 73206 - 73853 745 ## COG0352 Thiamine monophosphate synthase 76 32 Op 3 . + CDS 73853 - 74998 745 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 77 32 Op 4 . + CDS 74995 - 75192 213 ## cauri_1576 thiazole biosynthesis protein 78 32 Op 5 5/0.000 + CDS 75193 - 75972 797 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 79 32 Op 6 . + CDS 76008 - 77066 805 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 80 33 Tu 1 . - CDS 77063 - 79087 1928 ## COG1511 Predicted membrane protein 81 34 Tu 1 . + CDS 79151 - 79330 76 ## Predicted protein(s) >gi|227860836|gb|ACLH01000084.1| GENE 1 2 - 407 221 135 aa, chain - ## HITS:1 COG:no KEGG:cauri_1502 NR:ns ## KEGG: cauri_1502 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 135 1 135 173 258 100.0 4e-68 MVDRQGQARFGNSVHLGVRGGVMALLSGLVIAGLTGCSLINSANIIENIDRAAGVKEGEP GSVDMPIGDIFDSEYQRVIIICPGATEKDVIAASDGTWQGGSDEDDEWVPPAAGRVELYR DVQRPGYSTFMSSSA >gi|227860836|gb|ACLH01000084.1| GENE 2 519 - 1094 508 191 aa, chain + ## HITS:1 COG:Cgl1913 KEGG:ns NR:ns ## COG: Cgl1913 COG1268 # Protein_GI_number: 19553163 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 9 182 35 209 212 162 65.0 4e-40 MKKNSVATDIAYVAVFTALIIVFAFVSIPTPTVGVPIVLQNAVIILAGLVLGGRRGLFVG LLFIALGLVGLPILAGGRSALSAIAGPTVGYIVGYVVAPAIAGLIAYRAPRDKGGMTAVL AIAGLVGLAVQYFCGSLGLVFRSDMSFGAAVLAQGPFIIPDLIKVAVMVVIAVGVHAAFP DLMGRRTAKAK >gi|227860836|gb|ACLH01000084.1| GENE 3 1100 - 1792 299 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 6 217 132 351 398 119 35 4e-26 MPQIEFRNVSVTFDETPVLNDVSLILSEQRIGIIGANGGGKSTLVRLINGLGEPTSGQVV VDNLDVAKHGKEIRRRVGFVFSDAENQIVMPQVRDDVEFSLRRLKLPREERTARVDAALE RFGLGPLAEQSPHTLSGGQKQLLALASVLVIEPTVIIADEPTTLLDLRNRDRIRREFAGL EQQLIVVTHDLDFLSDFDRVLCIDNHSVVADGAPKEVIPFYTNLMESRPL >gi|227860836|gb|ACLH01000084.1| GENE 4 1796 - 2410 525 204 aa, chain + ## HITS:1 COG:Cgl1915 KEGG:ns NR:ns ## COG: Cgl1915 COG0619 # Protein_GI_number: 19553165 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 4 204 3 203 203 180 52.0 1e-45 MPKNIPLGFYVDADTIIHRIPAAVKFVVLIAFILLTSLAVHTIPWAAVSLALPLALFPIA RVPFRVALGQLAPPLYLLIALAAFQWWQKDLTAAAIMFLTIYAAISGAVLLTLTTKVSEM MDSLDRALAPLGRLGVPVENITLAMSLTIRLLPLMLGTVVEVLDARKARGATASLTAFGT PVIIRSIRRARAMGEALQARGVGD >gi|227860836|gb|ACLH01000084.1| GENE 5 2414 - 3250 1209 278 aa, chain - ## HITS:1 COG:Cgl1916 KEGG:ns NR:ns ## COG: Cgl1916 COG1842 # Protein_GI_number: 19553166 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Corynebacterium glutamicum # 1 278 1 275 276 269 79.0 4e-72 MANPFVKAWKYLMALFDSKIEENADPKVQIEQAIEDAQRQHQELSQQAAAVIGNQRQLEM QLNRRLSEIEKLQQNTRNALSLADKARAEGDVQKATEYENAAEAFAAQLVTAEESVEDTK KLHDQALQQAEQAKKAVERNGMALREKVNERSKLLSQLEQAKMQEKVSESLNSMNELTAN GNTPSLDAVRDKIERRYSKALGQAELAENSVSNRMHEIEQAGVQLAGHSRLEQIRAEMNN PKAVEGNSQQAIGSAEAKAQPNVQDDAVQARLRELRGE >gi|227860836|gb|ACLH01000084.1| GENE 6 3356 - 3742 403 128 aa, chain - ## HITS:1 COG:Cgl1917 KEGG:ns NR:ns ## COG: Cgl1917 COG1396 # Protein_GI_number: 19553167 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 14 119 1 105 107 116 73.0 1e-26 MGTSVGAEPLYGVMNTSVALLDKPTQSPAQSTRTPEPLLREALGLTLRAFRADKGVTLRE LASVARVSPGYLSELERGRKEVSSELLASVCHALDVSVSDVLIEAAGYMALPSMDEELAS TAPAASEL >gi|227860836|gb|ACLH01000084.1| GENE 7 3749 - 4234 206 161 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 18 160 766 904 904 84 38 2e-15 MSIEAQLVSTLSERGETVAFCESLTAGLAAATVACIPGASAVLRGGLVTYATEVKAHFLN TTVEELEEQGVVSAATAAQMAEAAVVETRADWGVGLTGVAGPDLQEGKPAGTVYVGLCGR GGGGVAKRGVLYELPAEGRNAIRAAAVQEALSLLLSTLEEK >gi|227860836|gb|ACLH01000084.1| GENE 8 4231 - 4830 265 199 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 1 192 452 663 904 106 34 3e-22 HGRMKSVNDSQAAHKQSQTKDVNPEVSNWNLPNILTSLRILFIPLFAWLVLAGHEWWAFL CFALLMLTDKLDGDIARARGLITNFGKIADPIADKALMTAALVCLNITGALPVWITVLIL FREFGITIWRFFLLRQGKVVPASQGGKLKTALQTVAVALYLCPLPGWMDLPSLLVMLAAA FVTVLTGIQYLIDGHRENQ >gi|227860836|gb|ACLH01000084.1| GENE 9 4860 - 5159 487 99 aa, chain + ## HITS:1 COG:Cgl1920 KEGG:ns NR:ns ## COG: Cgl1920 COG2350 # Protein_GI_number: 19553170 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 4 99 1 95 95 104 51.0 5e-23 MVGMKYFAVSYEYNPSNPVIAEVRPKHREFIGALHDKGQICGSGPYTDSKGGALIVLQFE DESVKVADVIALMDQDPFYTEGAVTGRAFREWNPVINSF >gi|227860836|gb|ACLH01000084.1| GENE 10 5177 - 6295 1298 372 aa, chain - ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 1 335 1 334 369 466 70.0 1e-131 MHVPLWVWAITMAVIVGFFIFDFYSHVRSPHEPSIKESGGWTLFYMAVAVVFGGVVWVLW DSEHAAQFYTGWVTEQALSVDNLFVFSLIMGSFKIPRRYQQKVLLIGIVLALVFRLVFIL MGAAIIAAWSDVFYLFAIFLIYTAVKLLIDEINGTPETDPNDMLVVKWLRKVVHVTPRYH GDKLTHREESGEKKGKFALTPLFVALAAIGLIDVMFAFDSIPAIYGITSEPFLVFTTNAF ALMGLRQMFFLIDGLLDRLVYLPYGLGTILLFIGVKLLFHALHENNLPFINGGENVSAVP EITTLVSLLVIVGVLLVTVLLSVWKDKRDQAQGGVVVSHNHYDWDDFGNKIVRNKEGELV GKADELPKSELP >gi|227860836|gb|ACLH01000084.1| GENE 11 6475 - 9693 2682 1072 aa, chain - ## HITS:1 COG:Cgl1922 KEGG:ns NR:ns ## COG: Cgl1922 COG1674 # Protein_GI_number: 19553172 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Corynebacterium glutamicum # 32 1070 2 957 959 883 54.0 0 MSVKNAPSRASGRGRTANRSRPSGRTSYSLTSATRAAETSEERTGSAFRAVGRGLGSVFG ATAKGMGSMARGVGHGLAGLKPAEAGSRDEDLYDSAYDAPHDEGAFDDYDELREPGEISG RAKNNKTSKRAEGAASSKSKVTRAQDVDGDMPTTVMERPARMEKSIRVSNPDAVALVLIG VAIILACATWFQVAGIIGEYLTNAVRYVIGAGAYVLPVALIAVAIALMMDISGPAGHFKP RVVGGTALIVVCMLSLIHIFAGLPKLTWNNNAAGEAGGVIGYGIGELLVAAFSSYVAVPL LFLLIVYGALNITGITLREAYDFVAAQFSALLGGLRDRKNRSDEGLLDDASADDYGYVSD DIDAIAEGRERPARPAYTPRPRPKQTPKQPPRQMPDENATVSFDSAAQPVSQEPVQHGRP SFDSRVDDTDEIPVVPEPEPAPQPEQKVAPQPVSKPAPKKRPRVDVGGAAGAALGAAAAE ASASAASAGSVGGDVVSAAHNEAVRMFQERSGRDARTGAKVEEEAPTAAEQTPATPSGAE DTALGGGYDVPTTDLLTAGKPAKARTEANDRIIEAITEVFEEFKVDAQVTGFSRGPTVTR YEIELGPGVKVSKITNLQSNLAYAVATDNLRLLTPIPGKSAVGIEVPNADREMVRLRDVL DSPALRADHDPMLIGLGKDIEGEYTSFSVKKMPHLLVAGATGSGKSAFVNSMLVSLLTRA TPEDVRLILVDPKMVELTPYEGIPHLITPIITQPKKAAAALQWLVEEMEQRYMDMQAARV RKIEDFNRKVRSGEYQAPAGSQREMRPYPYIVCVVDELADLMMTAPKEIEDSIVRITQKA RAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQGGAEKLIGMGDGL FIPQGGRPVRMQGAFVSDEEVQAVVDAAKAQGSPNYTEGVTDDKASEAKKEIDEEIGKDM DDLLEAVDLVVTSQLGSTSMLQRKLRIGFAKAGRLMDLMESRGVVGPSEGSKAREVLVKP EELDTIIWMIKGADPAEAPKEVQDAEGTGGTDDAEADTRTVEISANPSTGAF >gi|227860836|gb|ACLH01000084.1| GENE 12 9771 - 10412 226 213 aa, chain - ## HITS:1 COG:no KEGG:cauri_1513 NR:ns ## KEGG: cauri_1513 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 213 1 209 209 368 100.0 1e-101 MLGRMSFSSSERAKMVALFHELGPDAPTLCEGWSAHDLITHLWVRENRPDAAIGAFVPAL SSHADGIARKLRAQKTYEELVDSWGRGAGRLNPLRYADSVFNAAEHFVHHEDLRRANGRT EPRDLSRAAHAELLLPLKLLGTRLLSRSRRPVVLEPQGFPPIVAADKRRVSEQGDAVVRV RGTVAELLLWAFGREAARVEIEGDASAIVRSSL >gi|227860836|gb|ACLH01000084.1| GENE 13 10456 - 12525 2526 689 aa, chain - ## HITS:1 COG:Cgl1924 KEGG:ns NR:ns ## COG: Cgl1924 COG0595 # Protein_GI_number: 19553174 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Corynebacterium glutamicum # 1 689 1 718 718 934 69.0 0 MTESRNRSRKVTRKAGPPSETETASNEAASPVFQAPNESAASGATSKESGNSDDGNRRSR SRGSRGGRGRGRGGNNNHNNGNSNNGGRNNRNQNNNRGRRNVPKSMQGADLTKRLPEPPK QQKDSLRIYALGGISEIGRNMTVFEYQDDILIIDCGVLFPSSGEPGVDLILPDFGPIEKK IHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPKFVEVNE KSDVNYGPFRCRFWAVNHSVPDALGVMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSR YGDEGVDLMLCDSTNANIPGVSASEGDIPATFKRLVSGAKQRVIIASFASNVYRVQAAID AAVAAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKVLLITTGTQGE PMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVFGVINMLSQIGAEVITNKEAKV HASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVARDRVVLAQNGVVVD LRNGRAEVVGQIPVGNLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVIDNRTSRLLEH PTVSTTGFSDDDRGIVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKLMDSKYKRE PVILPTIVPTNSDILLPDDDEVHASRESL >gi|227860836|gb|ACLH01000084.1| GENE 14 12528 - 13436 709 302 aa, chain - ## HITS:1 COG:Cgl1925 KEGG:ns NR:ns ## COG: Cgl1925 COG0329 # Protein_GI_number: 19553175 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Corynebacterium glutamicum # 1 302 1 301 301 385 71.0 1e-107 MSTGMTAQAGVDTFGRVGVAMVTPFDQDGALDVSAGRRLAAHLVDNGVDSLILAGTTGES PTTSLDEKLELFAAVKEEVGGRAKLCAGAGTNNTATSIEAARAFADAGADSLLVVTPYYS KPSQAGVYAHFTAVADAVDLPVCLYDIPGRSGIPIETETLLRLAEVPNIKAVKDAKGDLV AAAPLIQETGLAWYSGDDGLNLPWLALGASGVISVIGHIAPRALADLYVAFDEGDIARAR EINAKTLSPLVEAQGRLGGVTLVKAALRLQGIEVGEPRLPVTAADAEEIEALRHDLEKAG VL >gi|227860836|gb|ACLH01000084.1| GENE 15 13508 - 14257 487 249 aa, chain - ## HITS:1 COG:Cgl1926 KEGG:ns NR:ns ## COG: Cgl1926 COG1351 # Protein_GI_number: 19553176 # Func_class: F Nucleotide transport and metabolism # Function: Predicted alternative thymidylate synthase # Organism: Corynebacterium glutamicum # 1 248 1 246 250 325 69.0 5e-89 MAKVSELDVQLIAATAFHAPQGVDWEVDEGASESEALVEFAGRACYESFDKPNPRTASNQ AYLHHILEVGHDALLEHATATLYIRGLSRSASHELVRHRHFSFSQLSQRFVHSEEAEVVL PKFIAEDEQLTRLTLQAADEARFVYEELLDALESKLEEEPNALLRKKQARQAARAVLPNL TESRIVVTGNYRAWRHFIGARATEQADTEMRQLAVTCLKLLREQSPVLFDDFHITTLADG TEMASSPYA >gi|227860836|gb|ACLH01000084.1| GENE 16 14257 - 15003 661 248 aa, chain - ## HITS:1 COG:Cgl1927 KEGG:ns NR:ns ## COG: Cgl1927 COG0289 # Protein_GI_number: 19553177 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Corynebacterium glutamicum # 1 248 1 248 248 340 72.0 2e-93 MTIKVGVLGAKGRVGQAIVEGVNAAEDLELVASIDRGTPLEKLVESGAEVAVDFTQPASV MDNLEFCIAHGIHAVVGTTGFDSERLAKVEGWTQKEDAGNVLIAPNFAISAVLTMVFAAQ AAKFFDSAEVVEYHHPNKLDAPSGTAVHTAQGIANARQEAGLDAMPDKTEQSLDGARGAD VDGVHVHAVRMQGMVAHEEVIFGTQGQSLTIRQDSYDRSSFTPGVLLGVREIASHPGLTV GLEKYLGL >gi|227860836|gb|ACLH01000084.1| GENE 17 15286 - 16578 1080 430 aa, chain + ## HITS:1 COG:no KEGG:cauri_1518 NR:ns ## KEGG: cauri_1518 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 8 430 1 423 423 805 100.0 0 MLISGETMTTTATRPPTFFFSTTNPNNPHAMARAQARRATYKTWVGAMPSLDADINTTAL SLVAAWSLPEGHIKSGLRAIHRLDSLPKVKAIQDTHCLLDIESLIAIDQPMSALTALTKE TLDFVDTILADFFTPSKPNQAFPTRSQIRRKVRDICKTLDDSIAYRDTRPKDTYRFSSNG TSAWLELQVEEDTGIKLDAFIHQTAAKEDITVPEAVIKLLSGEIKPPATVVLHTYQACDI EDAPTFIEGFGWRAEPMPHDKVRDLTGEVAEADGYQPGLIMRKLVEGRDGTCRVGGCGEP AFLSQLDHRHNWAEGGPTHPKNLACLCQGHHNMKTDGTLKYLLDPYSGDVIWLYEDGTWT ITEADGPLAPKQKRWAQTVAQHITATRKRIREEAQHLKQELDDYAQQQAQAQAQAEDNTD TDASTDDIPF >gi|227860836|gb|ACLH01000084.1| GENE 18 16758 - 17114 121 118 aa, chain + ## HITS:1 COG:Cgl0108 KEGG:ns NR:ns ## COG: Cgl0108 COG0346 # Protein_GI_number: 19551358 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Corynebacterium glutamicum # 1 111 18 126 147 100 48.0 5e-22 MQIYIASVPVDDVALAHDFYVNTLGFRVKDDVTHGDFRWLTVTNAEGQGDMELLLEPKAH SAAKDYAAALKADGVPVTQFLSADVEREYSELTEKWECISLSCRPTSAPPSSPSSMTP >gi|227860836|gb|ACLH01000084.1| GENE 19 17160 - 17819 208 219 aa, chain + ## HITS:1 COG:no KEGG:cauri_1519 NR:ns ## KEGG: cauri_1519 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 219 1 219 219 395 100.0 1e-109 MSHLPSSVAIIAAVSALCVMPLTACAERGSDTTPAPQFSAIPSSSAAIDGPEPPSSDTQN APSQQDANVAAFAGMGTAAIDDQHHMPDRLGGLIPTGVRVGAHDGFTRVVVDLEGEGEPG WFTAYTDDPRQQASGHPVEVKGSTFLNLGVEGTPWPSTPDLEERYMKPGTTPGTGVVSEV VYTTSFEAQTQLIIGLQKKTPYSVTFLEDPKRLVLDFQV >gi|227860836|gb|ACLH01000084.1| GENE 20 17916 - 20186 1377 756 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 35 750 10 689 714 535 44 1e-151 MSAKNAKKQPNNSVEFLIDDDYGITEAIATLDNGDFGTRTIRFETGQLARQAGGSVTTYL DEDTMLLSTTTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILACRL IDRPLRPTFVKGLRNEVQVVVTVLSMDPEEYYDVVAINGASASTQLSGLPVSGPVGGVRM ALIADDKHPKGQWVAFPNNEQHERALFEMVVAGRIVKKGRKDDVAIMMVEAGAGVNVAER IKEGAPAPQESTVAEGLEAAKPFIKSLCEAQAGLAERAAKETQEFPLFPPYGDDVYAAVE KAASKKLEKLLTIPGKQDRDDATNEYMEQVEAKLIEDFDDLDEADASKQIRNAFNAVMKD IVRTKILTEGFRIDGRGVTDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQ QIDSLTPVESKRYMHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSREDFPY AIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGEVNGKEKFVALT DILGAEDAFGDMDFKVAGTSEFITALQLDTKLDGIPSHVLADALEQARDARAAILDTMSE VIESPDEMSGLAPRITSVTIPVNKIGELIGPKGKTINAITEETGADVSIEEDGTVYISAA TGEAADAAIDRVNSIANPQLPKVGERFLGTVVKTVAFGAFVSLTPGRDGLVHISKLGGDE RIEKVEDVVNVGDKIQVEIADIDNRGKISLVPVEED >gi|227860836|gb|ACLH01000084.1| GENE 21 20327 - 20596 453 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833345|ref|YP_002835052.1| 30S ribosomal protein S15 [Corynebacterium aurimucosum ATCC 700975] # 1 89 1 89 89 179 100 5e-44 MALSTEKKAEILKEYGLHETDTGSPEAQVALLTSRINNLTEHLKDHKHDHHSRRGLLLMV GRRRGLLKYLAANDVDRYRDLISRLGLRR >gi|227860836|gb|ACLH01000084.1| GENE 22 20675 - 21592 602 305 aa, chain - ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 2 296 4 310 316 338 60.0 9e-93 MKIILDLDTGIDDALALAYALAHPDLELIGVTGTYGNVPVALGVRNSLALLELLDAEDVP VFTGPTRPGFSVAPISAFIHGRNGLGEVLLPPPRRKAYEDAVGFLLRSVREYGEDLVIVP TGPSTSIAAAMREDPDFARNARIVMMGGALTVPGNVTPYAEANVFQDPQATDYVFRHAHD LTMVGLDVTLRTLLTREHTKQWRGTRTGRIYADIVDYYIRAYKTTSPHLGGCGLHDPLAV AVAADPSLVTCLDLNLRCEGNGRTIGDPERLNDPTTRVAVAVDDARFVDDLMSKLGSLYT STSTC >gi|227860836|gb|ACLH01000084.1| GENE 23 21593 - 22573 413 326 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 16 319 14 309 317 163 35 2e-39 MVPVDIWYGIDSIPADLGPTSVTIGVFDGLHRGHQQLVTKAVEHARRHGQRAVMVTFDPH PVTVFLPERAPLSVITFERRMQLAEEMGIEAVLVIDFTEELRGVEPREYVTDLLVGRLHT EHVVVGENFTFGAGASGTAEALAEFGAELGFGVDIVPLLDDDGERICSTNIRAALAKGDI ARANWALGRHFTVTGPVVRGAGRGGKELGFPTANQYFPESVAIPADGVYAGWFVVEPTGA PLEGDMEPGVPYPAAISVGTNPTFGDEERSVESFVLDRDADLYGHEATVHFVDHVRDMEK FNSVEELLTAMERDVARVREILAREA >gi|227860836|gb|ACLH01000084.1| GENE 24 22572 - 23504 610 310 aa, chain + ## HITS:1 COG:Cgl1933 KEGG:ns NR:ns ## COG: Cgl1933 COG0130 # Protein_GI_number: 19553183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Corynebacterium glutamicum # 14 310 1 297 297 414 73.0 1e-116 MLSHCDRCPRLQGMTDPLERSGLVVVDKPAGMTSHDVVGKLRRFFRTRKVGHAGTLDPMA TGVLVVGIERGTKFLAHMVASTKAYDATIRLGTATHTDDAEGEATWGEPATAVEDSAIAR EIAALTGDIMQRPAAVSAIKVDGKRAHERVRAGEEVELPARPVTVSRFDILATRREGEFI DLDVSVACSSGTYIRSLARDLGEALGVGGHLTALRRTEVGPFRLDDAHPLDALEDSPELS LSLDEALARSYPVLEVTDEEAQALAMGKWLEPRGLKGTYAAVDPQGRSIALIQEKGKRLA TVFVARPSTL >gi|227860836|gb|ACLH01000084.1| GENE 25 23514 - 24188 570 224 aa, chain - ## HITS:1 COG:Cgl1934 KEGG:ns NR:ns ## COG: Cgl1934 COG2977 # Protein_GI_number: 19553184 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Corynebacterium glutamicum # 1 217 1 216 217 307 66.0 1e-83 MLEPSLFPESARFCYVRTDESMTNLLNYHHLSPEERSVVSQAVDVRKSEFGDARWCAHQA LKELNYTGDEPILRGERGMPLWPEGYTGSMTHTEGLRAAVAAPDTHVRSMGLDAEPAEPL PEHVLTMIARPGEMPQLAQLQAAGISCPDRLLFCAKEATYKTWFPMTRRWLDFDQAEIDL RLDGTLVSYLLARPTPVPFITGHWIIRDGYVIVATAVPALNFDR >gi|227860836|gb|ACLH01000084.1| GENE 26 24181 - 25002 552 273 aa, chain - ## HITS:1 COG:Cgl1935 KEGG:ns NR:ns ## COG: Cgl1935 COG1409 # Protein_GI_number: 19553185 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Corynebacterium glutamicum # 2 264 3 265 268 400 71.0 1e-111 MTTLWAVSDLHAAVRVNGDRIDELVPPNPNDWLIVAGDVAERIDLVINTLARLKNRYATV IWVPGNHELFSRGQDAYQGRSKYDRLVEGCREIGVITPEDPFPVFGGVTVVPLFTLYDYS FRPPGTTVEQALASAKEKQIIMTDEFAIAPFVDVRAWCWDRLAYSIKRLSRVEGETVLIN HWPLVQEPTLYLRWPEVALWCGTRHTRSWPRRYNAMAVIYGHLHMPNRANIDGVDHIEVS LGYPREWQAHGGLQPWPYPVLTIDEKTGRAEHA >gi|227860836|gb|ACLH01000084.1| GENE 27 25047 - 26345 1289 432 aa, chain - ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 9 431 13 435 435 433 60.0 1e-121 MASEQPVKVSAAEVFRLAVPALGVLAAMPLYLLLDTAVVGRLGAEDLASLGAAATLHSVV TTQLTFLSYGTTARASRLFGAGKREEAVAEGVQATWVAVGVGMVLAVIMWLFAGVFATWL TGNPDTARGTAQWLRIAAVAIPFTLINMAGNGWMRGVQNTRKPLYFTLAGMVPGAIAVPI FVHFWGLPGSALATVLGMGIIAAFFVAELRREHTGSWEIRWSVVRRQLVLGRDLIVRSLS FQVAFLSAAAVASRIGTAQLAAHQIMMQMWNFLSLVLDSLAIAAQALTGAALGAGSARYA RTVGTKVTLYSTSFSLALAAVLGLGSAFIPRIFTTSPEVLEVISGPWWVMTFLVIIGGVV FALDGVLLGAGDAAFLRTLTLASVLLGFLPGVWLAFVFGTGLTGVWGGIAAFILIRMVGV VCRFYSMRWAQV >gi|227860836|gb|ACLH01000084.1| GENE 28 26346 - 27308 973 320 aa, chain - ## HITS:1 COG:Cgl1937 KEGG:ns NR:ns ## COG: Cgl1937 COG0618 # Protein_GI_number: 19553187 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Corynebacterium glutamicum # 9 318 9 316 332 272 47.0 5e-73 MSRTNYEAAVDALVQASSICIITHLRPDADAVGSAAALTLALRQRGKQTRTVIGQRRDIS ANLFSIPTVDEIELVDELPQGYDLYVTVDCGSIDRTGSVAREIEEMAAVGRVLCIDHHAS NDGFGAINVVDPVCESTTVVILDILDRLSIQIDRVIAHCLYAGLVTDTGNFRWGRPAMHD IAARLMLYGLDTKQIALELMDSSTADDLQMIGRVLSGLRIEEAGEHRLAVLFVPHEEVSS HADSAIESFVDYVRALKGTDIGVVFKEQAPDVWAVSLRSSAVNCAEVALAFGGGGHIPAA GYTAHGRPEEVIAQLVGALS >gi|227860836|gb|ACLH01000084.1| GENE 29 27309 - 27752 538 147 aa, chain - ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 1 146 1 146 149 181 76.0 4e-46 MVDHARAARMAKRIQTIVASAIERQIKDRRLELVTITDARVTGDLHDATVFYTVRGTDIG TEPDYDQAAEALTRAKGQLRKIVGDELSVRFTPTLSFELDTVPEASAHMEELLARARARD AELAKLKEGAQPAGDANPYKTSDEEED >gi|227860836|gb|ACLH01000084.1| GENE 30 27903 - 30620 2488 905 aa, chain - ## HITS:1 COG:Cgl1939 KEGG:ns NR:ns ## COG: Cgl1939 COG0532 # Protein_GI_number: 19553189 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Corynebacterium glutamicum # 93 905 178 1003 1004 959 72.0 0 MPGKLRVHELAKQLGVTSKELLATLKEQGEFVKTASSTIEPPVIKKMRAHYEAKGGEDKA AEKNAPAATPASASKKPTEKKPATAAKPGPKPSAAPKPGAAPKPGGAPKPGGAPKPGATP KPGGAPKPGAQRKNTEKGSERAVTPRSMPKPGGTRRVANNPFSTGSSSDRPSPGPRPGGT KGQRSAGKPGDNRGGKGGARPQGDGNRSGGRRPSPAMMPSHPNPASMPSKAAGSGGGGRG RGGRGGGPGHGGPGHGGFRGRGGRRGGTAGAFGRPGGAPRRGKKSKRQKRHEFEEQQKHE VGGVRLPDGGGKVVRLRRGASLADFAEKIGADPAALVQALFNLGEMVTATASVSEDTLQL LGSEINYEVQVVSPEDEDRELLESFDLQFGEDEGGEEALEKRPPVVTVMGHVDHGKTRLL DTIRKTNEGAGEAGGITQGIGAYQTTVDLEDGPRTITFLDTPGHEAFTAMRARGAKSTDL AILVVAADDGVMPQTIEAINHAKAADIPVVVAVNKIDKPEASPDKIRGQLTEYGLVPEEY GGDTMFVDISAKNNINIDDLLEAVILTADAALELTANPDMDAQGSAIEAHLDRGRGPVAT VIIQRGTLRIGDSIVVGDAHGRVRRMLDEFGNDVEEAGPSRPVQVQGLNGVPGAGDNLLV VEDDRVARQIAAQRDARKRSALQAKARKRVSLEDLDAVLKETSTLNLILKGDNAGSVEAL EDALLDIEVDDEVQLNIIDRGVGAVTQTNVSLAAASDAIIIAFNVRAEGKATEEANAEGV DIRYYTVIYRAIEEVEAALKGMLKPIYEERDTGAAEIRALFKSSAVGTIAGCMVTEGKVK RNGKVRLVRDGNVITSDAKIESLRHEKDDANEINAGYECGMVLSYPDIQVGDIIQAYEEV EVPRD >gi|227860836|gb|ACLH01000084.1| GENE 31 30730 - 31065 128 111 aa, chain - ## HITS:1 COG:Cgl1940 KEGG:ns NR:ns ## COG: Cgl1940 COG2740 # Protein_GI_number: 19553190 # Func_class: K Transcription # Function: Predicted nucleic-acid-binding protein implicated in transcription termination # Organism: Corynebacterium glutamicum # 6 88 21 101 112 95 62.0 1e-20 MSQGQRLRTCIATRQKHPDTELLRVVADKGDPSGRRVVPDPSRRLPGRGAWIRPDLEAVE LAERTRAFRRALRMSTDVDTGHVREYLAARQQVQSAGNSPCDPELKRKTEH >gi|227860836|gb|ACLH01000084.1| GENE 32 31186 - 32202 556 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 5 331 11 342 537 218 39 6e-56 MNIDLEALRTIQRERGVPVKDLLEAIAGALLYSYLDHRAESAETKAEGTKSRVDIDADSG AVTVIVTESDRETGEVISEYDDTPDNFGRIGAQAVRDAILRKLRENEAERTYDSYSELTG TVVSGVVQRDIHANNRGVVVVQLGTEHDSQDAFLLPAEQLPGEKLEHGDRVKAYVVGVNR NGAKVQITLSRTHPELVRGLFELEVPEVADGAVEIIAIAREAGHRSKISVRGHAKGLNAK GACIGPKGSRVSNVMRELGGEKIDIIDFNEDPAVYVGNALAPSKVVRVEILDEEAQVAKV TVPDYQLSLAIGKEGQNARLAARLTGWKIDIHSDAARD >gi|227860836|gb|ACLH01000084.1| GENE 33 32206 - 32772 490 188 aa, chain - ## HITS:1 COG:Cgl1942 KEGG:ns NR:ns ## COG: Cgl1942 COG0779 # Protein_GI_number: 19553192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 179 1 176 178 163 53.0 2e-40 MAFPTPAQLTEILQPVAAARGLDIEDVKTTRAGKKSQVIIRIDGDERPSSDLIEELSQEI SEIFDAQEEAGTLNFGAGYTLEVSTPGVDFPLSASRHWRRNQGRLVGYALAEEPGTTRVA RIGALSEDEESVALITMVKKEVRYQIERLENLSRAVVEIEFAQPSAVELEAAMQTFDFAE QNSATRED >gi|227860836|gb|ACLH01000084.1| GENE 34 32771 - 33664 788 297 aa, chain + ## HITS:1 COG:no KEGG:cauri_1534 NR:ns ## KEGG: cauri_1534 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 14 297 1 284 284 407 99.0 1e-112 MRSRLGHPGRVYRVNRRVVVPTLLACAAPWLGGCQATDAIVDYFGPHADPTLTSLAQAAS ADALALEELDADAAALRAQHADELYSEIERLCGRDEEGHVPRSCEVNREGEAHEATDAAA VLAAASSSTEEQLDAVSPESRPLLVAQAIAMEARSTDEPGAVPELTEDDADLATELLDWE YQQVYALDFARSYVTPDVEELVDERLALHENRVLALQEAVAKIGPVPQPAAAYTSSSGEL PVDAASARAFLDYVAHSDAVTWASAASQEVPDQAAPNAEWRSWLISVAAQSHRISAA >gi|227860836|gb|ACLH01000084.1| GENE 35 33695 - 34090 368 131 aa, chain - ## HITS:1 COG:DR2024 KEGG:ns NR:ns ## COG: DR2024 COG4270 # Protein_GI_number: 15807019 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 12 88 11 87 120 63 45.0 1e-10 MSSHNPALTYSMAAALSAMGVLHFAKPKPFESIIPPQLPGSARFYNFTSGAWEVVTGALL ANPSTRPAGGLSALALFAAVWPANFYQAYRDLESGKASTGKKIYHAVRLPLQIPVMRYAW SLYAEKNAKRR >gi|227860836|gb|ACLH01000084.1| GENE 36 34118 - 35887 2518 589 aa, chain - ## HITS:1 COG:Cgl1948 KEGG:ns NR:ns ## COG: Cgl1948 COG0442 # Protein_GI_number: 19553198 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 587 1 583 588 874 75.0 0 MITRLSELFLRTLREDPADAEVPSHKLLVRAGYVRRVAPGVYTWLPLGLRAMRKIEDVIR QEMNAIGGQEMLFPALLPREPYEESNRWTEYGDNLFRLKDRKGADMLLGPTHEEMFTTAV KDMYSSYKDFPVTLYQIQTKYRDEERPRAGVLRGREFTMKDSYSFDMTDEGLDESYARHR KAYQNIFDRLEIDYAICKATSGAMGGSASEEFLAVSEVGEDTFVRATEGEYAANVEAVVT QAPEEISFEGLPEAQEHETPKSETIESLVEWAKGAGITVDGREVTAADTLKCMMIKVAAP AATEEEKEWELAAVLIPGDRALDEKRLEASLEPAEFELAGEGDFKKNSFLVKGYVGPRVL NAHDVKVYADPRVVSGTSWITGADAPQRHVVGLVAGRDFTVDEFIEAAEVKEGDPAPNGQ GTLTLERGIELGHIFQLGRKYTEAFDVQILDENGKRAVPTMGSYGIGVTRMLAVLAEQRH DEKGLNWPVAVAPYQVHVAVANKDAAALEAGQKLVEDLDRAGIEVLYDDRPKVSPGVKFK DAELLGMPFIAILGRAFADGIIELRIRGGETREVPADSIVDTLTELIRG >gi|227860836|gb|ACLH01000084.1| GENE 37 35920 - 36642 776 240 aa, chain + ## HITS:1 COG:Cgl1949 KEGG:ns NR:ns ## COG: Cgl1949 COG3022 # Protein_GI_number: 19553199 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 230 1 232 245 275 62.0 4e-74 MLIILPPSETKAHGGSGAALNWDELSFSALNPIRQEIAAELSSLDVDEALEVLKLSEKLR GEAESNRELASSPTMPALERFTGVLYDALDAPTLPPEARRYLAVGDALFGLVRADDLIPH YRLSGGTKLGGRTLKSRWGTAITDELRALVDADEFLIDMRSGTYQQLGKLKDAATVRVES VQEDGSRKVVSHFNKHYKGELARVLALQGENVSSLENAARVAQEAGMSTELRGTELVLVV >gi|227860836|gb|ACLH01000084.1| GENE 38 36650 - 37963 1114 437 aa, chain - ## HITS:1 COG:Cgl2030 KEGG:ns NR:ns ## COG: Cgl2030 COG1085 # Protein_GI_number: 19553280 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Corynebacterium glutamicum # 9 437 9 442 442 531 61.0 1e-150 MSEALFSRVEPIQTMADGTVKQVNPFSGTEVWTVPGRGNRPLSHPAKDPQPLGPDALTHS CAFCSGRMLDTPPEKSRILASGEIQRGLLPHELDNSQPLFRRVPNLFEIVSYDYWHENYG FTMDPDLARHKESYEADEAGRLHVLNVVRTKLKAAGKDAALDDDSLLALADGFFGGGHDV IISSRHFADGAVDDSQLASSGTLSPDEHYLLTTFTAESTRELYQRNRYASYVAVFQNWLA PAGASFDHLHKQLVAIDALGMAAHQENAILRAHPNMYNDWAVGYAAKRNLVIAENDYAVL FAGFGHRYPTLEIFSKSPRCEPWDQNPDEVRGMSDLIHAAHAAVGPDVACNEEWHHRPPS VDLPQPWRVMIKLRVSTLAGFEGGTKVYINTIDPWGLRDRVVDAMFRLRERGEIASGIAI ATECELKRNSLRYNPLV >gi|227860836|gb|ACLH01000084.1| GENE 39 38015 - 38830 663 271 aa, chain + ## HITS:1 COG:AGl1187 KEGG:ns NR:ns ## COG: AGl1187 COG0384 # Protein_GI_number: 15890713 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 266 17 287 290 243 52.0 2e-64 MQHRFFEVDVFATGPFTGNPLAVVADADDLSTEEMQRIAHWTNFSETTFLCSPTDPGADY RVRIFTPYEEFPFAGHPTLGSARVAAELLGKSGTLIQECGVGLVTVRQDEGRFAFATPPL LRHGQLSEAERSEAAAVLGIDEETIVDSGWVDNGPGWRLVQLESAEAVRNLRPTPTPGVK VGVIGLTGDVEPAYEVRAITGQFEDPVTGSFNGGAAQFLRTKGAVPARYTAAQGSQVGRD GRVFIDDDGYELWVGGNVHVRVRGTLGSCDD >gi|227860836|gb|ACLH01000084.1| GENE 40 38823 - 40211 1018 462 aa, chain + ## HITS:1 COG:Cgl1953 KEGG:ns NR:ns ## COG: Cgl1953 COG0397 # Protein_GI_number: 19553203 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 5 462 3 474 474 374 46.0 1e-103 MTEQTLPFELHNDFTQRLPQMVTASRGEEQPAARLVVLNEELATELGLDPDWLRSEDGIE FLLGRGPVTPHAMAYAGFQFGQYNPTMGDGRALLLGEVTGPATPHNPTGLWDLHAKGTGL TPYSRYGSDGRGTLRSMLREYLFSESMHALGVPTTRSLAVLATGRPIQRQMVEEAGVLVR VAASHIRVGSFHFAAHSQVPGLLQQLAAYTSERHYPGADCRELFTHVMEAQAATIAGWMQ LGFIHGVMNTDNTTLSGETIDYGPCAFMERFDPNTWFSSIDTQGRYRFERQPDMLGWNLA RLAESLLPLIDDSPDNALTWAQEAIDTFGERYERARRREAQRRLQMPDELFQDYSAALAQ AAPDLTQANRSLVSAAAGEPAAAYAEFEDRSFVDAYCASGPDIKLLDQTVPRVIPRPRLV ENALGDAEEFARLLHATTRPFNAAPEYEQPGGTEGYLTYCGT >gi|227860836|gb|ACLH01000084.1| GENE 41 40512 - 42014 2130 500 aa, chain - ## HITS:1 COG:Cgl1955 KEGG:ns NR:ns ## COG: Cgl1955 COG0579 # Protein_GI_number: 19553205 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Corynebacterium glutamicum # 3 498 4 498 500 761 72.0 0 MSSDKKTAQVVDEVEVALIGAGIMSATLGAMLRELEPSWTQMVFERLDGPALESSSPWNN AGTGHSALCELNYTPEKNGRIDISKALNINEKFQVSRQFWSHQLNNGILTDPKAFINPVP HVSFAQGSIQVDYLKRRFDALKDNHMFPNMQFSDDDATFQEKLPLMSQGRDFNSQKVAIS WTDAGTDVNFGALAKQFFTAAKAAGTEIRYGHEVVDIKREGSKWRVVAKNLHTGDYQAVH AKFVFVGAGGYALDLLRKAGVREVSGFAGFPVSGLWLRSKNPELVKQHHAKVYGKAAVGA PPMSVPHLDTRVIDGEEGLLFGPYGGWSPKFLKKGSYLDLFKSIRPDNITSYLGVAAQEF GLTKYLVTEVLKDFDKRVETLKEYVPSADPADWETVIAGQRVQVIKPAGAPQFGSLEFGT TLINNPEGNIAGLLGASPGASITPAIMIELLERCFGENMIQWGDKIQEMIPSYGTKLSKD KKLYNEMWEYTQKTLQLESK >gi|227860836|gb|ACLH01000084.1| GENE 42 42282 - 43316 902 344 aa, chain + ## HITS:1 COG:Cgl1956 KEGG:ns NR:ns ## COG: Cgl1956 COG2267 # Protein_GI_number: 19553206 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Corynebacterium glutamicum # 18 337 6 332 341 285 43.0 1e-76 MYLAARPIMSSMTYDELKWTEDFLGPDFQATTLELGADPDGEGDVCATLLRYCPDTDAHD DRPALVWVHGMTDYFFHDHVARYFYDLGYAFYALDLRKCGRSRRDGQTWHYISDMKNYDA DLNAALDALPNQRVVIVGHSTAGTIIALWLDRLRRQDRERFNRISGVVFNSPWLAMMGMA DKTYELLKHVIYSGAAIAPKFPIPGGDLTAYGESIHSEEQGDWDFDRRFKPLGGHPKYLG WVAAVFRGFDAIHSGRIDMGLPLLTMTSGRSELNQAYSESSNTADVVVDVRQSQRWAKEL SARYTLHVVNNGRHDLFLSRPEPLQEALSTTAEWLRAVVPVETV >gi|227860836|gb|ACLH01000084.1| GENE 43 43373 - 44758 462 461 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 10 454 4 448 458 182 28 5e-45 MVGMTSAQHFDLVIIGTGSGNSIPSPEFDDKSIAIIEEGTFGGTCLNVGCIPTKMYVYAA DVALAAREATRLGLSAHVDAVDWEGIVERVFHNRIDQIARGGEEYRRGEETPNITVFDQH ARFIGPKTLQAGDDIITGDNIVIATGSRPVLPEPYASSSVPVHTNEDIMRLEKQPRSLIV VGGGYIAMEFAHVFDGLGTEVTVVNRSEKLLRFLDEDLSSRFNDIARERFDVRIGTTTAL EETADGVRLTLDSGDVLEAEAILVATGRQPNGDQMDLSTSGIEMHEDGRIKVDEFGRTTC EGVWALGDVSSPYMLKHVANAEQRAVQHNLLHPDDLQPMPHEHVPAAVFTHPQIATVGLT EAQAREEGYDVTVKVQNFGDVAYGWAMEDTTGICKLVADQGTGKLLGAHLMGPQASTLIQ QLITAMAYGLDMREFARSQYWIHPALPEVVENAVLGLEWQE >gi|227860836|gb|ACLH01000084.1| GENE 44 45100 - 45540 880 146 aa, chain + ## HITS:1 COG:no KEGG:cauri_1544 NR:ns ## KEGG: cauri_1544 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 1 146 146 215 100.0 4e-55 MRIRNAAIAGATALAVTFGGSTVAFAEDTNSSAQENTSPSSQENSNSSASKEGAKGEASL SSKIGDTWFNKGENDNKTTEADGRAIFGSSKHENCDANETKEECTRLSDQPTWAKAFYGL GIASAIASVAGFIGVVYNFFVHGPSF >gi|227860836|gb|ACLH01000084.1| GENE 45 45582 - 45986 736 134 aa, chain + ## HITS:1 COG:no KEGG:cauri_1545 NR:ns ## KEGG: cauri_1545 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 134 1 134 134 194 100.0 7e-49 MRNFRTAAVAAATAASVAFAGTSVAFAAESQNENENTSSSQLSSAIGEANKDKSNETLSS KIGSQLEKDKKVSGEDLLGKETKDETNPAWAKIWRDGTYAALGTAIAGALFAAYNFAVSN NIVPAHVLDPIFRR >gi|227860836|gb|ACLH01000084.1| GENE 46 46299 - 46652 617 117 aa, chain + ## HITS:1 COG:no KEGG:cauri_1546 NR:ns ## KEGG: cauri_1546 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 117 1 117 117 139 100.0 3e-32 MCIRKATIVGATALAVAFGGTTVATAAEDSSNDSASNSSASAGEQQGTQKAGGSSALGKA LEADKEANGQNIFGQNSSISSEPKWAQALAGIGIVATIITIAGGLVGPALNYLKFGM >gi|227860836|gb|ACLH01000084.1| GENE 47 46860 - 47135 455 91 aa, chain + ## HITS:1 COG:no KEGG:cauri_1547 NR:ns ## KEGG: cauri_1547 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 91 1 91 91 124 100.0 1e-27 MSSALSSEGNGSLSSKLGGVTDGNITGKGADAFGSTKNPSQVPQWLDLWRGGTIAMVAAA AVSPAVAAYNYAVYSGTIPDYVGQALKNASF >gi|227860836|gb|ACLH01000084.1| GENE 48 47258 - 48112 1134 284 aa, chain - ## HITS:1 COG:Cgl1961 KEGG:ns NR:ns ## COG: Cgl1961 COG0024 # Protein_GI_number: 19553211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Corynebacterium glutamicum # 8 284 17 293 294 475 81.0 1e-134 MLKQEKDTPIRKVPKDIERPEYVWKDTVQEAQGEPFVQTPEVIEAMREASRIAANALQEA GKAVAPGVTTDEIDRVAHEYMCDHGAYPSTLGYLGFPKSCCVSLNEIVCHGIPDTTVIED GDIVNIDVTAFKNGVHGDTNATFLAGNVTEEHKLLVERTKEAMMRGIKAAKPGREINVIG RVIESYAHRFGYNVVTDFTGHGVGPTFHNGLVVLHYDSMTYRDILEPGMTLTIEPMINLG SLDYEIWDNGWTVQNTDGRFTAQFEHTIVITDDGNEILTLPDEA >gi|227860836|gb|ACLH01000084.1| GENE 49 48197 - 50068 1575 623 aa, chain - ## HITS:1 COG:Cgl1962 KEGG:ns NR:ns ## COG: Cgl1962 COG0768 # Protein_GI_number: 19553212 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Corynebacterium glutamicum # 9 623 7 619 622 644 54.0 0 MLLRCPSMKKFVALLGAASIAASSLVGCTPKPVSARPVAEQFLEDMETRNNEDLAQLVDD STTATNTLDATFAGLQAEGLDVELTDVEQEEAKATAHYSVTWTLPRNRSLRYDTSMALTR KDKDWTVRWQPSIIHPELGAHQHLELRSIAPKRAGVVSSDGVELMSPGLQYRLVVDTDAV DDPRPVAAKVSGALSQAHEEDDSFPEIDSGELAKNLEEVDGAYSVTMLNEAQAARLRPVL ENQKGIRFNEEPALITRDTGLAPDILARVRAMVSEDVDGTNGWSVSVVNEHGAALSDVEY HEPEAAPSVKVSLDYDVQRAAQEAVNLRPEYEAMIVAMRPSTGEILAVAQTPEADKKGDI ALQGQFPPGSVFKIITASAGVDKQGLSPDSIVPCPGTMDLYGRTVTNYNGFSLGSVPLRQ AFAQSCNTTFAQISTDLPKGELRDVGKQYGLGIDYEVPGLSTLTGSVPEGETPLERTEAG YGQGLDLVSPFGMALVSSTVAAGKTPTPTLIESRETKVSEEVPAPSEETLAQVRDMMRQV VASGTAAGMQAQGTVYGKTGEAEINGGSHAWFTGFRDDDIAFATLVVLGGGSTISVNITD NFLQRLDTLRAEGHGEVASAQEQ >gi|227860836|gb|ACLH01000084.1| GENE 50 50105 - 51268 1435 387 aa, chain - ## HITS:1 COG:Cgl1967 KEGG:ns NR:ns ## COG: Cgl1967 COG0821 # Protein_GI_number: 19553217 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Corynebacterium glutamicum # 1 387 1 393 393 633 89.0 0 MSTPIGLGIPDGPPPTLAPRRKTRQLMVGQVGVGSDHPISVQSMTTTKTHDINATLQQIA QLTASGCDIVRVACPKTVDAEALPAIAQKSPIPVIADIHFQPKYIFAAIDAGCAAVRVNP GNIKEFDGRVKEVAKAAGDAGIPIRIGVNAGSLDKRIMEKYGKATPEALVESALWEAGLF EEHGYGDIVISVKHNDPVVMVEAYRQLAAQCDYPLHLGVTEAGPAFQGTIKSSVAFGALL AEGIGDTIRVSLSADPVEEIKVGDQILQSLNLRPRKLEIVSCPSCGRAQVDVYKLANEVT EGLDGMEFPLRVAVMGCVVNGPGEARDADLGVASGNGKGQIFVKGEVIKTVPESKIVETL IEEAMRLAEEQGLEAVEGAKAEVRVTK >gi|227860836|gb|ACLH01000084.1| GENE 51 51346 - 52554 1254 402 aa, chain - ## HITS:1 COG:Cgl1968 KEGG:ns NR:ns ## COG: Cgl1968 COG0750 # Protein_GI_number: 19553218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Corynebacterium glutamicum # 2 402 3 404 404 468 59.0 1e-132 MANVLGIVLFAVGIGITVALHEAGHMFTARAFGMRVRRYFIGFGPRVASFTRGHTEYGLA AFPVGGFCDIAGMTAQDEFLTEEEEPYAMYKKPAWQRIIVLAGGITVNLLLGFIILLIIA MTTGLPNPDADVRPRVGKVSCAVNQNAEGELEPCQGLGPAGEAGVEPGDIVVALNGETMD SFAQLRDTVMNYPGDTVTLTVERDGAARDFDITLATVTRLNAEGQLVKVGAIGMTNQIID IRETYSFVDAIPATARYSGYALNATVQGIAQFPAKIPGVVASIFGQERDVNGPMSVVGAS RVGGELVERSLWSSFFMMLATLNFFLALFNLIPLPPFDGGHIAVIFYEKIRDALRRLMGK EPKGPADYTKLMPVTYVLAFILMAVGALIMIADVVNPIRLFG >gi|227860836|gb|ACLH01000084.1| GENE 52 52570 - 53736 1007 388 aa, chain - ## HITS:1 COG:Cgl1969 KEGG:ns NR:ns ## COG: Cgl1969 COG0743 # Protein_GI_number: 19553219 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Corynebacterium glutamicum # 3 387 5 389 392 498 74.0 1e-140 MSTQRILILGSTGSIGTQALDVIADNPDKFTVVGIAAGGSNPQLVVEQARALNLSFDHVA VAKPDAARTVSEALGGTVLSGPDSAEELVKAVDTDKVLNALVGSMGLASTIATLEKGELL ALANKESLVAGGSIVTRLAGEGQIIPVDSEHSAMAQCLRAGSGVELERLVLTASGGPFRG WTREEMWDVTPQQAAQHPTWSMGQMNTLNSATLVNKGLELIEATLLFDVHPDLIDVTVHP QSIVHSMATFTDGCTIAQCSPPSMKLPISLALDWPHRVPGAQPALDFSAAHDWRFEPLDD EAFPAVRLAREVAAAGGTHAAVYNAANEEAAAAFLAGRIHFPEIVDVVSHVVGEASEFAG VPSSVDDVLAVEGEARRRANALVDSLAR >gi|227860836|gb|ACLH01000084.1| GENE 53 53929 - 54378 524 149 aa, chain + ## HITS:1 COG:no KEGG:cauri_1553 NR:ns ## KEGG: cauri_1553 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 149 1 149 149 298 100.0 7e-80 MSSHKPASQVFDGVSTDDVPSAGFGWSRISRSGVQIAGWTSVVFLLAYNFGNHKGHVETI WLFALAILIALGLVIYALQPKLSQVRTLTARNKPVGHEEPDWAYEQKTVHNVYASLTDDE LRALNIEPSRIAHLRGVSEGRHAAKPVTN >gi|227860836|gb|ACLH01000084.1| GENE 54 54464 - 56053 1149 529 aa, chain - ## HITS:1 COG:no KEGG:cauri_1554 NR:ns ## KEGG: cauri_1554 # Name: not_defined # Def: ABC-type transport system, permease component # Organism: C.aurimucosum # Pathway: not_defined # 1 529 1 529 529 927 100.0 0 MTSTLFRLHRTLWWRSVASNPSTLIMGLMMLIYGALGLLSLAFMVYSDITTPGHGYQALT VGVAGGMLIYVLLALFMPAGEKQLSPTTLGALPLTSREVLPGLFLSGLLTTRAIMSVVFS LVYAVIGSVFLILTGPGWAAVPFVVGMVLSCATTIIFGECLGQVASVIADSQKSRTQIAA MVVMGLLVFGMLQAQRVLESLPPLHTVGAVSAWTPFGAGVGWTLALADGHFLTALAQLLI AVASLGLLGWVWSRQITGLMRNPGAGGDVASEVTGKGVSKLELGAWSYSSPAAMEYTRAL RYLTRDKRQTGMLYMMPLFGVLTLYQLWRGDDFTAYFMLCFSAIVLSSLLANDYGFDGPS NWVHMVAPVAPRTILHARHLAHVTIPYIGFVLLAVVALVFSENFTLGLLSTAVAIGVFIS TAAVGLGLTVLNPYPLSAPGQNRWNDKSGYSAGAFLTAFVGMLLVWGPALPGIVVSALAY ERGGWLLYTALIVSVLVPSLVYAGVWRFAGNKAQERTPEIYAKVNRYVS >gi|227860836|gb|ACLH01000084.1| GENE 55 56050 - 56865 740 271 aa, chain - ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 12 262 17 267 285 337 67.0 1e-92 MTHPYREDLAADPRTQALAVRDLRKSFGSQIAVNHLNLDVPRGSIYGIVGPNGAGKTTML TMACGLQRPDSGQSFIAGHNVWEEPIPAKQAMGLLMDGAPVFDRLTGAEYLHYLGALHKL ERSESLRRAQELLDALSLSEAADKRIADYSAGMTKKILLAGAVLHNPEVLILDEPLEAVD PVSGRLIQQMLRAYASRGGTVILSSHVMELVEGLCDHVAIINGGQVITAGHVDAVRQGQS LSDLFIAAVGGRDLDASKFGWLRSQAAGERE >gi|227860836|gb|ACLH01000084.1| GENE 56 56943 - 58049 1426 368 aa, chain - ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 1 364 1 364 366 580 78.0 1e-165 MAEPLKLNFSAPRRGLPPKHFADLTEAERIEALAELGLPKFRAKQLAKHYYVHHTADVSE MTDIPAAAREAVQERLFPTLMEPIRQTSTDDGETTKSLWRLHDGTLLESVLMRYPGRATL CISSQAGCGMACPFCATGQGGLDRNLSTAEIVEQFRHAARLMEEEGGRLSNVVFMGMGEP LANYKRVVHAVRQITGSELTGFGLSQRNVTVSTVGLAPAIRKLADEDLSCTLAVSLHTPD DELRDTLVPVNNRWPVEEVLDAAKYYADKSGRRVSIEYALIRDKNDQDFRADMLGRKLHA ALGSKVHVNVIPLNPTPGSEWDAAPKARQDEFVRRVIAQGVPCTVRDTKGDEIAAACGQL AADERETA >gi|227860836|gb|ACLH01000084.1| GENE 57 58143 - 58547 589 134 aa, chain + ## HITS:1 COG:Cgl1974 KEGG:ns NR:ns ## COG: Cgl1974 COG5416 # Protein_GI_number: 19553224 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Corynebacterium glutamicum # 5 130 31 156 161 81 48.0 5e-16 MTNPENSPEEFRTTTPAEEPLTNYTAEAPATEGSVEPVPTTTDYENKNDGKVKGSFAAST WIALIVGFLLLIVLIIFILQNQHQVPLNFLNWSVQFPAGVTYLICAIAGALIMALVGGWR MFELRRQVRKQARR >gi|227860836|gb|ACLH01000084.1| GENE 58 58550 - 59404 722 284 aa, chain - ## HITS:1 COG:Cgl1975 KEGG:ns NR:ns ## COG: Cgl1975 COG0575 # Protein_GI_number: 19553225 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Corynebacterium glutamicum # 1 284 1 284 285 326 60.0 3e-89 MPKPKNSAGRDMPAAIAVGVGLGALVVFAVWAGPLVWYLVVAAAVGLGMWEVLTRLREHS YYVPRTLLIVLGQAMLWVSWFLNAPGLVAVYVVAVLALMFGRLFHNGRHRPPINYLRDMS MGIFVLTWIPLFGTFAAMLSRVETPFASGAASIVVFMLCVVASDTGGFIAGVMFGSHPMA PAVSPKKSWEGFAGSVVFGTLTGALSFAFLLHHKPWVGALMGLGLVFCATLGDLVESQFK RELGIKDMSALLPGHGGIMDRLDGMLPSAMVTWVAMSFLTTLAP >gi|227860836|gb|ACLH01000084.1| GENE 59 59535 - 60092 922 185 aa, chain - ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 1 185 1 185 185 266 82.0 1e-71 MIDEIQLEAEEHMTASVEHTREQLLTIRTGRANPAMFNGLVAEYYGVPTPITQMATISVP EPRMLLIKPYEQSVMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKMAKSK GEDGKIAIRNIRRRAMEQLKKLQKDGDAGEDEVIAAEKEMEKITSGYIEQVDKLVANKEE ELMEV >gi|227860836|gb|ACLH01000084.1| GENE 60 60163 - 60891 931 242 aa, chain - ## HITS:1 COG:Cgl1977 KEGG:ns NR:ns ## COG: Cgl1977 COG0528 # Protein_GI_number: 19553227 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Corynebacterium glutamicum # 15 242 1 228 228 400 87.0 1e-111 MTTPEPKRTGYKRVMLKLGGEMFGGGKVGIDPDVVENVARQIAEVAKQGTEIAVVIGGGN FFRGAELSQRGMDRARSDYMGMLGTVMNSLALQDFLKQQGIDCRVQTSINMAQIAEPYLP LRADRHLEKGRVVIFGAGMGMPYFSTDTTAAQRALEIGAEVLFLAKAVDGVYSADPRTNP DAELYSEITPREVIEKNLKVADATAFSLCMDNNMPILVFNLLTEGNIKRAVNGEQIGTLV QS >gi|227860836|gb|ACLH01000084.1| GENE 61 61146 - 61958 431 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 269 1 261 283 170 38 2e-41 MANYTAADVKALREATGAGMLDCKKALDESQGDYDKAVEYLRIKGAKNVSKRAEREATEG LIAVSGNTMVEINCETDFVAKNEAFKSFASKIAEAAGEAKVNSGEELNNLEIDGKKVSEV VDEESAKTGEKLQARRAVTIEGDNVAVYLHQRSADLPPAVGVLVSYEGNAEGAHAVALQI AAMNAEYLTREDIPAEIVEKEREIAEATTREEGKPEAALPKIVEGRLNGFYKSVVLLEQA SLSDSKKTVKQVADEAGTTITGFVRYEVGA >gi|227860836|gb|ACLH01000084.1| GENE 62 62206 - 63123 1542 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833386|ref|YP_002835093.1| 30S ribosomal protein S2 [Corynebacterium aurimucosum ATCC 700975] # 1 305 1 305 305 598 99 1e-170 MLTRAFVARVRNKTPHNLAKPKQHIESERNMAVVTMRELLDAGVHFGHQTRRWNPKMKRF IFTDRNGIYIIDLQQTLTYIDEAFEFVKETVAHGGTILFVGTKKQAQEAVAEEASRVGMP YVNHRWLGGMLTNFQTVSKRLKRMKELQAMDAAEDGYKGRTKKEVLMLTRERTKLERVLG GISDMTKAPSALWIVDTNKEHIAVKEAQKLNIPVVAILDTNCDPDEVDFPIPGNDDAIRA TKLLSGIIATAVDEGKKAREERQLAQAKEAAGDTAEKDARDAAEAAAASDPASAEKSEDA EKSAE >gi|227860836|gb|ACLH01000084.1| GENE 63 63017 - 63274 128 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227504798|ref|ZP_03934847.1| ## NR: gi|227504798|ref|ZP_03934847.1| hypothetical protein HMPREF0308_1068 [Corynebacterium striatum ATCC 6940] hypothetical protein HMPREF0308_1068 [Corynebacterium striatum ATCC 6940] # 20 66 1 47 54 67 80.0 3e-10 MVTTAMFRSLSICCFGFARLCGVLFRTLATKALVNTPSSWGPRQPRTVSSLTQEATTSPR VVNPCGALPGIKHRLLWASLVLHTR >gi|227860836|gb|ACLH01000084.1| GENE 64 63428 - 63934 305 168 aa, chain + ## HITS:1 COG:Cgl1980 KEGG:ns NR:ns ## COG: Cgl1980 COG0739 # Protein_GI_number: 19553230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 1 159 5 162 164 144 51.0 8e-35 MRYRLLCLSALLCLWAALADFPLAAAFVDPTTGEPVASRVLRGFEPPEKRWMAGHRGVDL DLPVGGKVRAAGDGVVHFAGSIAGKPVLSIAHGNGLRTTYQPVFARVKKGDQVQEGDVIG TLAPSVDGYPGLHWGAIKGREDYINPLDLLGEPVIRLKPAGGNERRRP >gi|227860836|gb|ACLH01000084.1| GENE 65 63897 - 64808 708 303 aa, chain - ## HITS:1 COG:Cgl1981 KEGG:ns NR:ns ## COG: Cgl1981 COG0582 # Protein_GI_number: 19553231 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Corynebacterium glutamicum # 5 303 18 315 315 328 57.0 7e-90 MSGESGSSERHVGGQLEEAIEDFAEYQRIVRGRSEATVRGYCSDLRLLAPEVPEFAAFTL NSLREWLAHAVAEGKSRSTLARRTAAVRAFSTWAAREGYLESDVAQRLATPKVGKHLPTV MSPTAAGELMGNAVSTDEVHFLRDSAMLEFLYATGVRVAELVGLDVGDIDLSRRTARVTG KGNKQRVVPFGDAAHDALCAWLKTGRPELAGETEAVFVGTRGGRIDARQVRRVVERAAQV TGAPGLTPHGLRHSAATHLLEGGADLRIVQELLGHSSLQTTQVYTHVSAQRLKDVYARSH PRA >gi|227860836|gb|ACLH01000084.1| GENE 66 64824 - 66002 330 392 aa, chain - ## HITS:1 COG:Cgl1982 KEGG:ns NR:ns ## COG: Cgl1982 COG0758 # Protein_GI_number: 19553232 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Corynebacterium glutamicum # 13 391 9 389 394 387 54.0 1e-107 MSELNLSSTRHTWAYLNRVVEGPSPTLHGLLSQYPAEEIARGIYKGEDWIGPLRQATASR RDWLRQEEDLAAAEAVGARLITPADAEWPGEEFSRAFGFYHQGMVEAPATFDDQAFPPHS LWIRGGNLRETVSQSVALVGTRAVSRYGWEAGSLLASGLASHQWTVVSGGAVGVDTAVHE AALDAGGLTVAVAACGIDISYPARNAKLFDRITEKGCIVSEFAPGTRPQRFRFLSRNRLV AAMTSGTVVVEAGFRSGALNTLNWAEALGRVAMAVPGPITTSGSLGCHQRIQDGRAQLVA SADEVRGLVGKAGEVDVAGQYELEFQPTAVQRLSRNELRIYDSTPPESAEEGASAEDIAA AAGMRVALTIHLLVAMQKMGVITRSGAMWQRT >gi|227860836|gb|ACLH01000084.1| GENE 67 65999 - 67522 286 507 aa, chain - ## HITS:1 COG:Cgl1983 KEGG:ns NR:ns ## COG: Cgl1983 COG0606 # Protein_GI_number: 19553233 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Corynebacterium glutamicum # 16 498 3 486 494 486 56.0 1e-137 MALGRCDTIALDGVLARVVTVEANVGPGLPGIHVVGLGDAAISESRDRIRTAVSNSHLPW PKTKVVVSMSPASLPKAGAHFDLPMALAILAAGQSERSRLSGALILGELGLDGQVRPVSG IIPAILAARSQGYDTLIIPVGNAAEAALVPGMTVLVAETLWDAFAWACGSDCLPDARLIA HAAAPAREQVADFSEVAGQKEAKWAAEVAAAGGHHVMMVGPPGSGKSMIASRLPGILPRL STEQAVEATAIHSVAGTVGTAVSRAPFIAPHASVTRAALIGGGSGRPRPGAVSLAHHGVL FLDEVSEVPAQVLDSLRAPLEEGQVRLTRASREVIFPAQFQLVLAANPCRCGAEEPARCE CRAADRMNYLSNLSGPLRDRLDIIVSLSGQSAVLHAEGEESSADIAQRVAAARERMKARW EADGLGSVVNGAVSASYLRRHRSAAESAMIMLSAYLAEGELSQRGVDRVLRLAWTLADLD GSARPELDHVSRALDLRGAGTIERLAA >gi|227860836|gb|ACLH01000084.1| GENE 68 67509 - 67946 285 145 aa, chain - ## HITS:1 COG:Cgl1984 KEGG:ns NR:ns ## COG: Cgl1984 COG0792 # Protein_GI_number: 19553234 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Corynebacterium glutamicum # 24 145 8 122 122 77 40.0 6e-15 MTRNLATSLHSPTVGQTIRPADALGKAGEKFAADFYRARGAQVIAANVHYRVGELDLVVR ESDGTIVFCEVKTRATRNFGVAEAVTPRKLKRLRKAAAQWLSTARSENQALSKVRFDVLG LVATGAKSGEAFEVEYFQGVDHGSR >gi|227860836|gb|ACLH01000084.1| GENE 69 68146 - 68451 456 101 aa, chain - ## HITS:1 COG:no KEGG:cauri_1568 NR:ns ## KEGG: cauri_1568 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 101 1 101 101 168 100.0 8e-41 MSAEELDNYEAEVELSLYREYRDVVSQFSYVVETERRFYLANAVELIPHTSGPDVYYEVR MSDAWVWDMYRSARFVRYVRVITYKDVNIEELDKPDFVLPE >gi|227860836|gb|ACLH01000084.1| GENE 70 68539 - 69180 564 213 aa, chain - ## HITS:1 COG:Cgl1986 KEGG:ns NR:ns ## COG: Cgl1986 COG0164 # Protein_GI_number: 19553236 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Corynebacterium glutamicum # 1 213 1 213 222 278 66.0 8e-75 MRRLKQKRTYEVALSKAGLGPVAGVDEAGRGACCGPVTIAACILPDRILPGLEWLDDSKK LTPAAREKLEPVIKRRALAWSVVHIGAKGIDAFGIQHANLSGMRRAVAQLGIRPGYVLSD ALFVPGLPAPQLPIIGGDTAARCIAAASVLAKVSRDRLMADVAKQYPGYALETHKGYGTA VHQEAIARLGATPEHRMSYRNVAEAHARFLARA >gi|227860836|gb|ACLH01000084.1| GENE 71 69186 - 69887 473 233 aa, chain - ## HITS:1 COG:Cgl1987 KEGG:ns NR:ns ## COG: Cgl1987 COG0681 # Protein_GI_number: 19553237 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Corynebacterium glutamicum # 6 233 33 260 262 281 55.0 1e-75 MTRTSSPRVRDVLSALAVTFVALALIQAFVGRLYLIPSSSMEPTLHGCPGCTNDRIAVQK VSYYFSDPRPGEVVVFAGPESWNTSFEVKRSRNVLLRGIQNMAAVVGLAPNGDNILVKRV IATGGQTVSCQEGDPAVMVDGRPTNQEFVLDPPEIPVDERVGSQACGGAYFGPVTVPEGH LWVMGDNRTNSLDSRAHLGDKLQGTVPVENVRGKVAAVVVPISRAHTVEDMSL >gi|227860836|gb|ACLH01000084.1| GENE 72 69865 - 70653 862 262 aa, chain - ## HITS:1 COG:Cgl1987 KEGG:ns NR:ns ## COG: Cgl1987 COG0681 # Protein_GI_number: 19553237 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Corynebacterium glutamicum # 16 261 17 261 262 301 60.0 1e-81 MEKENDITEGSQGVGGEASESAAPPAEEKKQMPWLLETALVVVAVLAVVGIFQNFVGRQY VIPSGSMEPTLHGCEGCNNDRIFTEKISYYGDNSPEPGDVVVFKGTPDWDRNWVSPRSDN PVIHRIQDALSYVSLTPPDENTLVKRVIATGGQTVSCQEGDPAVMVDGKPIEQDYVQDPP TYRVDETTGSYACGGAYFGPVTVPEGNIWVMGDNRTASADSRYHMQDEYQGTIPLENVRG KVMFIFFPFNRIGGVDDPDIQS >gi|227860836|gb|ACLH01000084.1| GENE 73 70783 - 71127 575 114 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833396|ref|YP_002835103.1| 50S ribosomal protein L19 [Corynebacterium aurimucosum ATCC 700975] # 1 114 1 114 114 226 100 4e-58 MANLIDKVDAASLRDDIPSFRPGDTLDVNVKVIEGTTERTQLFKGVCIRRQGDGIRETFT VRKVSFGIGVERTFPVHSPNIASIEVVRRGRVRRAKLYYLRDLRGKKARIKERR >gi|227860836|gb|ACLH01000084.1| GENE 74 71411 - 73213 2245 600 aa, chain + ## HITS:1 COG:Cgl1275 KEGG:ns NR:ns ## COG: Cgl1275 COG0422 # Protein_GI_number: 19552525 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Corynebacterium glutamicum # 1 593 1 586 587 1010 82.0 0 MTATHNPIQSTDSGEIHPKHSYSPIREHGLEVPETEIQLDDSPTGPNEPFRIYRTRGPEC EPEVGLPALRAEWIAERGDVEEYEGRARNLADDGRSAERRGAASQEWKGERRQPLRSKDG KRVTQMHYARQGIITKEMEFVALREHCDPEFVRSEIARGRAILPNNVNHPESEPMIIGRK FLTKINANIGNSAVTSSIAEEVSKLRWATRWGADTVMDLSTGDDIHTTREWILRNSPVPI GTVPIYQALEKVNGVAEDLTWEIFRDTVIEQCEQGVDYMTVHAGVLLPYVPLTTNRVTGI VSRGGSIMAGWCLAHHKESFLYENFDELCEIFARYDVAFSLGDGLRPGSLADANDTAQFA ELKTIGELTRRAWEYDVQVMVEGPGHVPLNMIQENNELEQDWASDAPFYTLGPLVTDIAP GYDHITSAIGAAHIAMGGTAMLCYVTPKEHLGLPNRDDVKTGVITYKLAAHAADVAKGHP GARAWDDAMSKARFEFRWHDQFALSLDPDTAQAYHDETLPAEPAKTAHFCSMCGPKFCSM RISQDIRDTFSDSLGMPSFPGKEAIDPEVVAAARAGEKQMSEEFKAQGSQLYQEEETAHA >gi|227860836|gb|ACLH01000084.1| GENE 75 73206 - 73853 745 215 aa, chain + ## HITS:1 COG:Cgl1990 KEGG:ns NR:ns ## COG: Cgl1990 COG0352 # Protein_GI_number: 19553240 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Corynebacterium glutamicum # 3 214 7 218 221 217 60.0 1e-56 MPDLRCYFVTGTGTHEDVVRIAAAAARGGAGVVQVRSKPISARDLYCLGRDVARAVAKAN PETRVLIDDRVDVAAALRHAGEPVHGVHVGQDDLPVAAARALLGPDAIIGLTTGTRELVE SANDVADVIDYIGCGPFRATPTKDSGRTPLGLHAYPELVKLSRVPLVAIGDVTAEDAADL AATGVAGLAVVRGIMHAADPEAYCRELLSGFDEGA >gi|227860836|gb|ACLH01000084.1| GENE 76 73853 - 74998 745 381 aa, chain + ## HITS:1 COG:Cgl1991 KEGG:ns NR:ns ## COG: Cgl1991 COG0665 # Protein_GI_number: 19553241 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Corynebacterium glutamicum # 19 376 15 372 374 333 51.0 4e-91 MSTSSDSSVIVVGAGVIGLATAVELAARGHEVTVLDPAPASGASHYAGGMLAPAAEVVYQ QDPLFPLMRASGAWYPELIDLVVQHTEVPTGYRAEGTLVVAADRADAQHLAELADYQSLH GMEVERITVREARRAEPLLSPRLTAAVSIPGDTQVLPRQWTAALISAAQALGVRFFRTAA QSINADTGVVTTAAGEFEAEQVVLAAGLGARDIEWAASAGLEESPLHLRAVYGDILRLRV PDELQPLLTRVVRGFVEDRPIYLIPRSDGTLAVGATTREDTLATAQAGGVYSLLRDATRV LPAVEECEFLEASAGARPGTPDDLPYLGRVSDKLVISTGYFRHGILLTALAARCTRELIE GTEPSIDLAACSPLRHLKEQP >gi|227860836|gb|ACLH01000084.1| GENE 77 74995 - 75192 213 65 aa, chain + ## HITS:1 COG:no KEGG:cauri_1576 NR:ns ## KEGG: cauri_1576 # Name: thiS # Def: thiazole biosynthesis protein # Organism: C.aurimucosum # Pathway: Sulfur relay system [PATH:car04122] # 1 65 1 65 65 104 100.0 9e-22 MILILNGQPCDTAAGTVAQLLDEKGIDADGTAVAVSEQVVPRSQWESTPLTEGVAVEILT AVQGG >gi|227860836|gb|ACLH01000084.1| GENE 78 75193 - 75972 797 259 aa, chain + ## HITS:1 COG:Cgl1993 KEGG:ns NR:ns ## COG: Cgl1993 COG2022 # Protein_GI_number: 19553243 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Corynebacterium glutamicum # 1 259 1 260 260 360 79.0 1e-99 MLTIADTTFSSHLIMGTGGATSHEALERALVASGTELTTVAMRRHAGTRGGESIFDLLRR LDIAPLPNTAGCRTAREAVLTARMAREALGTTWVKVEVIADEHTLLPDVVETLDATELLA AEGFTVLAYTSDDPVAAQRLEDAGAAAVMPLGAPIGTGLGILNPHNLELICSRASVPVLV DAGIGTASDAALAMELGCSGVLLASAVNRCQNPEAMATAMRHAVEAGRLARSAGRIPERE HAQASSTFEGLASWADQVL >gi|227860836|gb|ACLH01000084.1| GENE 79 76008 - 77066 805 352 aa, chain + ## HITS:1 COG:Cgl1994_1 KEGG:ns NR:ns ## COG: Cgl1994_1 COG0476 # Protein_GI_number: 19553244 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Corynebacterium glutamicum # 2 256 4 254 277 269 55.0 5e-72 MLSKDELARTARQRLLPGFGDAAQERLHAAHVLVVGTGGLGCPALQQLAAGGIGRITIID SDTVDLSNLHRQVLFGVGDVGKPKAEVAAARARELSPELTITALKERLDSSNVLDLCSEA DLVLDGSDTFDTKYLVADACELTSTPLAWGTVLRYGGQAALWHSGNACADGRGVGLRDLF PAPPNGEALECSTAGVLGATTSVIAGLMATAAVATLGVLPDHRDMIGRVTSYDALPGSFR TLKVGPDPERPLISALPGERSLPPELRDGHAALLDISEEPNFFADAVTLPWHTVTDDDSV RRALSACASELIYVACPSGGRSAGFVLRYADLAADMGIELRNLPGGLAAHDY >gi|227860836|gb|ACLH01000084.1| GENE 80 77063 - 79087 1928 674 aa, chain - ## HITS:1 COG:Cgl1600 KEGG:ns NR:ns ## COG: Cgl1600 COG1511 # Protein_GI_number: 19552850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 4 651 24 603 619 203 27.0 1e-51 MLIVFLLVAPIVIAGTMMWAMWDPSKYMRNIDLAVVNEDVGVEKQGTYTNYGDQVVEGLM ETQYLNFAEVSKGDGDEGLLKGKYLMVVTIPKNFSEQAVTIISDKPVKPEIHFATNDYYG TNGSVISSSLIPQVQTSVENAISKKYADQVIEGLNKLSDGLSTAAEGTGRIDEGAGRLQE GGGRAVEGIAKLDAGAGDLNNGTGQLLDGTNRLNDGVGRLSDGAAQLDDGAAQLADGSDK LLAGTGRLADGAGQIDGGVNQLTGMLIPVLKQAQSVAPALLQLVDVLRGLGMHQQADQLY SLVSKLDPAASGNMVAQLEKLSDGTGQLYYNLSDPNSEYLGGMMALNDGAHRLSDGSQQL RAGVGELGDGAAQLQDGASRLYEGTGTLKDGTSQLAAGGTELKDGMDQLKAGSNELATKL ADGAAKAPSITQPDTSAQNMAVPINFTSSNLHPVQTVVSPVDPTEKNITGGASLLFVLVF GFLVMLLLAMTLPYYLGRRGESATSPVRGILAAFGVVAGLNFLVLAFMGLMSSTMGWSPA SWPMMLLVIAAIAAVGAATYQFFLVTFGRKIGAVFAVGAFALGVMVFGGVWPVAAIPRPL SMLHPFHPMTYAKNAFTRATDGIHDGTFWAGIAVLFIVTALALVASCVIFRARHHGTARI LDEHLFRTPAVAGA >gi|227860836|gb|ACLH01000084.1| GENE 81 79151 - 79330 76 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAYRALGSSAPLVRRSSRSTIRPRFPVGFSLTAHVRLLDVMVQVRFYSFIQPFNPDTQT Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:57:49 2011 Seq name: gi|227860835|gb|ACLH01000085.1| Corynebacterium aurimucosum ATCC 700975 contig00166, whole genome shotgun sequence Length of sequence - 24193 bp Number of predicted genes - 21, with homology - 21 Number of transcription units - 8, operones - 5 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1053 438 ## cauri_1580 hypothetical protein + Term 1130 - 1176 0.7 2 2 Op 1 . - CDS 1271 - 3550 180 ## PROTEIN SUPPORTED gi|241889493|ref|ZP_04776792.1| 30S ribosomal protein S1 3 2 Op 2 . - CDS 3591 - 3959 485 ## cauri_1582 hypothetical protein 4 2 Op 3 30/0.000 - CDS 3961 - 4803 837 ## COG0336 tRNA-(guanine-N1)-methyltransferase 5 2 Op 4 . - CDS 4800 - 5300 217 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 6 3 Op 1 1/0.250 + CDS 5334 - 5732 142 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 7 3 Op 2 . + CDS 5756 - 6424 493 ## COG1309 Transcriptional regulator + Term 6646 - 6677 -1.0 - Term 6430 - 6468 7.3 8 4 Tu 1 . - CDS 6491 - 7009 844 ## PROTEIN SUPPORTED gi|227833411|ref|YP_002835118.1| 30S ribosomal protein S16 9 5 Tu 1 . + CDS 7302 - 9554 2207 ## COG1835 Predicted acyltransferases + Term 9562 - 9600 10.6 - Term 9548 - 9588 11.0 10 6 Op 1 1/0.250 - CDS 9621 - 11216 2126 ## COG0541 Signal recognition particle GTPase 11 6 Op 2 3/0.000 - CDS 11267 - 13366 1817 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 12 6 Op 3 24/0.000 - CDS 13370 - 13708 552 ## COG0347 Nitrogen regulatory protein PII 13 6 Op 4 . - CDS 13712 - 14665 935 ## COG0004 Ammonia permease 14 7 Op 1 . - CDS 14827 - 15195 463 ## COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit 15 7 Op 2 . - CDS 15200 - 15472 209 ## cauri_1593 putative monovalent cation/H+ antiporter subunit F 16 7 Op 3 12/0.000 - CDS 15487 - 16041 607 ## COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit 17 7 Op 4 21/0.000 - CDS 16042 - 17583 1921 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 18 7 Op 5 6/0.000 - CDS 17584 - 18021 467 ## COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 19 7 Op 6 . - CDS 18018 - 20999 3149 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - Term 21111 - 21142 1.5 20 8 Op 1 10/0.000 - CDS 21188 - 23098 627 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 21 8 Op 2 . - CDS 23173 - 24192 1133 ## COG1196 Chromosome segregation ATPases Predicted protein(s) >gi|227860835|gb|ACLH01000085.1| GENE 1 1 - 1053 438 350 aa, chain + ## HITS:1 COG:no KEGG:cauri_1580 NR:ns ## KEGG: cauri_1580 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 334 86 419 435 660 100.0 0 AATSAPERLRALGASRGDAVELASLHAIYFGDTRFTGKQRTARQAAQRQGHDLATLSLIE TYTAKLKKQLDVWDLRVALASTPSERVPSVAAERLKELKPKRVPSPGVRLTYRKNGPHSL TVTDSALNISTMRSTLESINPTDLLDATRQVFFKEDVGSRPAVGTNVVITLDELDKIIRH DGDDIELELTNGGRMSGAEFLTYKFAETGYATLVHPTIGPVWLHRLSRFASLEQRIMASA EHPTCAIEDCNKPADYCQVHHIIPWQAGGETNPPNLTMLCAYHNGINDDDPTSPTGRGYV FRLKGPVDYIPPWGTPITAQPSYQEAANRLAKATPPAQPPDPPNGSPPPG >gi|227860835|gb|ACLH01000085.1| GENE 2 1271 - 3550 180 759 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|241889493|ref|ZP_04776792.1| 30S ribosomal protein S1 [Gemella haemolysans ATCC 10379] # 535 721 194 374 402 73 31 9e-13 MNIAATIAGELGVKEQFVEAALKLMAEGNTVPFIARYRKEATGGLDDSQLRIIEERSTYL QELEERKETVLAAIEEQGKLTDELRALIQGCETKARLEDLYLPYKKRRKTKADIAREAGL EPLTDKLIENPSADPTELAGEYLTEGFEEAKKALEGARAILVDRFALDADLVGEVRERMY TSGSMNAGVVEGKETEGAKFKDYFEFSEPFDKLPSHRILALLRGENEGVLQLNLDAGDDA MYEGMIADRFDLDVSTSRWLADAVHWGWRTKLSISSGLDVRMRLKEKAEEGALKVFATNL RDVLLAAPAGQRATLGLDPGYRNGVKCAVVDPTGKVLATTIVYPHQPQQKWAEAVRELAS LSAAHSVDLMAIGNGTASRETEKLAGEVADLIAQAGGKRPNPVVVSEAGASVYSASQLAA DEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQVALARTLDGVVEDA VNGVGVDLNTASAPLLERVAGVNSTIAANIVAYRDENGTFASRKELKKVPRLGPKAFEQA AGFLRINGGKDPLDASAVHPEAYPVVARIAEKTGLGVSELIGNSRVLTKLSPADFADDTF GVPTVTDIIAELDKPGRDPRPEFKTATFKEGVDKVSDLKPGMILEGTVTNVAAFGAFIDI GVHQDGLVHVSAMSHKFVSDPHDVVRSGQVVKVKVMEVDVERQRIGLSLRLDDEPGKPAP KRRNNNGGGQNSRRDSNRKGGRGRSGGGSMADALKKAGF >gi|227860835|gb|ACLH01000085.1| GENE 3 3591 - 3959 485 122 aa, chain - ## HITS:1 COG:no KEGG:cauri_1582 NR:ns ## KEGG: cauri_1582 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 122 1 122 122 245 100.0 4e-64 MDVSTDLSILMTEAEWNKVLEGMPQRLREGGVEPQDINAEVVSFTCEPDNILVNEYMDKH GQPPVSEHVWRVIVNGTSDLPLTKVTAAVAECLPPHTLWYGTSEIGHTEFGLGTSCAWQG GV >gi|227860835|gb|ACLH01000085.1| GENE 4 3961 - 4803 837 280 aa, chain - ## HITS:1 COG:Cgl2001 KEGG:ns NR:ns ## COG: Cgl2001 COG0336 # Protein_GI_number: 19553251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Corynebacterium glutamicum # 1 270 15 284 292 417 78.0 1e-116 MRIDVLTIFPEYLDPLRHALLGKAIEQGKLAVGVHDLRQWATDAHKSVDDSPYGGGPGMV MKPEVWGPALDDVSSGTASTQDLQSALPHLSKPRHDDIHGVEARSYGESEDSDKPLLIVP TPAGKPFTQADAQAWSAEEHIVFACGRYEGIDQRVVDDAQQRYRVREVSIGDYVLIGGEV AALVIAEAVVRLIPGVLGNRRSHEEDSFSDGLLEGPSYTKPREWRDLQVPDVLTSGDHAR VDRWRREQSLARTWQRRPELLDAAELSDADRAYLETLEED >gi|227860835|gb|ACLH01000085.1| GENE 5 4800 - 5300 217 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 5 161 7 163 179 88 32 5e-17 MELLIGRVVKSHGIKGEVSVEVTTDSPETRFAVGEVLHGTQGKKEHELTIAAVRAHKGRL LITFKEIPDRTAADSLRGTQFFAEPLDDPEDDGFYDHELEGLRVLLDRKEVGEVTGVTHG PTQSLLEVTLAEGKEALVPFVEEIVPEIDLDAGTCTITPPEGLLDL >gi|227860835|gb|ACLH01000085.1| GENE 6 5334 - 5732 142 132 aa, chain + ## HITS:1 COG:Cgl2004 KEGG:ns NR:ns ## COG: Cgl2004 COG1917 # Protein_GI_number: 19553254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Corynebacterium glutamicum # 22 125 1 107 116 102 55.0 2e-22 MTELPINDATTFGAASHGSAALTALNLLDEAPKPNPSRPRPAVKRALSADGANLILFSFL PGQDPPDHKAAHPITVQVLQGAVTFSCGEEEHVLTPGRIVHLPAYVPHAVSCSDQPALML LTMFTPNIGANV >gi|227860835|gb|ACLH01000085.1| GENE 7 5756 - 6424 493 222 aa, chain + ## HITS:1 COG:CC2204 KEGG:ns NR:ns ## COG: CC2204 COG1309 # Protein_GI_number: 16126443 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Caulobacter vibrioides # 4 114 14 123 215 73 38.0 3e-13 MTSSKPYHHGNLHEEILREAIKLGREGGPEAVTIRAATRAVGVSPTAAYRHFKDQAALLD AVGAVATSELITKLGETFEATEGNIVDKMVAAGFAYYHYALEERNFFECMMATSGFDIPA GLAAATEGPGEDQRVQAAFNFYGYMEQYARSIGQEPNRQNMMQNCLAGWSTVHGFTVLCL SGHLASLSEERMEKMAQSVIASAVRGLDFENPLEAQPTAPTI >gi|227860835|gb|ACLH01000085.1| GENE 8 6491 - 7009 844 172 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833411|ref|YP_002835118.1| 30S ribosomal protein S16 [Corynebacterium aurimucosum ATCC 700975] # 1 172 1 172 172 329 100 9e-90 MAVKIKLQRMGKIRNAEYRVIVADARTRRSGKAIENIGIYQPKQEPSLIQIDSERAQYWL GVGAQPTEPVLALLKVTGDWQKFKGLPGAEGTLKVAEEKPSKLDLFNAALAEANNGPTIE AITEKKRKAKEEAEAKAAAEKAAEEAAAAEAAKAEEEAAKAEEADSAEESAE >gi|227860835|gb|ACLH01000085.1| GENE 9 7302 - 9554 2207 750 aa, chain + ## HITS:1 COG:Cgl0684 KEGG:ns NR:ns ## COG: Cgl0684 COG1835 # Protein_GI_number: 19551934 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Corynebacterium glutamicum # 11 697 32 706 716 590 46.0 1e-168 MNKQAPSTFRYRYDLDGLRGIAIALVVLYHVFVGRVSGGVDVFLLLSGYFFLGSQLRYAA RPNASLNPWWPIWRTLRRLVPSLVLVIGVSYVLVRLFAPKLMNTELTKQITATVFYYQNW ELARQNADYAAASATTSPLQHMWSMAVQGQFYLLGIFFALGLAAFMRLRPKNTGLREQRF SSINSIAGPILLVVTVASFAYASRDGLFGTPENYYSTWSRAWELTLGAVLVIYGSHLRMP QRLSNLATALGLAALAGTGLLISDSLAFPGPLSLLPIGGAVLIIIGSGGSFSRVLTTRVS RWLGDIAYPLYLWHWPLLIISIAALGLETPPWWLGAIIIVVSLGLADVTHRFVEKPLRQH RKRPLADDLPVHRGLADLRTRTGALRGVGGVVVATCTVALVAVQPLWLRSLQEANHEILD PRLYPGATTFVENITPPENVEIKPDPILARGIQPPVADNWCFIPEQEPTDYFIETQKDGE TPCIFGDVNSDVEVYLVGGSHAEQYSSALDHLGREMGFKLVPLTRVGCPIELGEELSVKP SCAEWSKEVVKRIIDADPALVVSNSTRPGQPLGHGPDAVPPGYKAFWDELAKHDIPFLGF RDNPWGFDEHGNGLQFDECYVATQDSLGCGMRFEEVYAPYDPGAEVLSQYKNMLAVDTSK WFCDANGDCPVIIGNIMVYRDMHHFTKAFADSAIPLIREAITPFLKGETVQQQPPQIPTD SPMVPQTAETSPATPAEPIPYPAYPADKAI >gi|227860835|gb|ACLH01000085.1| GENE 10 9621 - 11216 2126 531 aa, chain - ## HITS:1 COG:Cgl2009 KEGG:ns NR:ns ## COG: Cgl2009 COG0541 # Protein_GI_number: 19553259 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Corynebacterium glutamicum # 1 527 1 546 547 751 78.0 0 MFESLSDRLQSALSGLRGKGKLTEADINATAREIRLALLEADVSLNVVRGFIKRIKERAA GAEVSEALNPAQQVVKIVNEELIEILGGETRRLNLAKNPPTVIMLAGLQGAGKTTLAGKL SKHLAAKGHTPMLVACDLQRPGAVQQLQIVGERAGVDVYAPDPGTSLDSHEHEMGTSHGD PVDVAKRGIEEAKRTQHDIVIIDTAGRLGIDETLMTQARNIRDAVNPDEVLFVIDSMIGQ DAVQTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMFASTGEKLEDFDVFHP ERMSSRILGMGDLLTLIEQAESKLDQSKAEEAAKKMGSGEMTLNDFLDMMLMVRNLGPMG NLLKMMPGGNKMNQIADMVDEKQLDRIQAIIRGMTPEERENPKILNASRRKRIALGSGVS VSDVNQLIERFTEAKKMMSQMAGRFGMPGMGGGRSATKKKPKGRKGKNGKRKPPKRRGGG GMPGGMPSMQELQKMQEQLGGGMPGLGDIKMPKGMENIDLNNLDFGQGKKK >gi|227860835|gb|ACLH01000085.1| GENE 11 11267 - 13366 1817 699 aa, chain - ## HITS:1 COG:Cgl2010 KEGG:ns NR:ns ## COG: Cgl2010 COG2844 # Protein_GI_number: 19553260 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Corynebacterium glutamicum # 1 696 1 689 692 626 50.0 1e-179 MSTAAQLREDAYASAMRLTQSLQLPPGCALAATGSFARRAMTPFSDLDLILLHPDDTELP EDVVSGVWYPIWDAKYRLDYAVRTPREFGAIAGSDPAAGFAQLDLAFVAGDKQLVDSTRA QVYASWRRLLQSNFDAFVDLAIARWRRSGTLATMTHPDIKNGRGGLRDIQFLRALALGNL ADAPALEKEQALLLDVRTLLHVTARRHRDVLDPEFAAEIAHELGFADRYDLSAAVVTAAT AVDKAVERALATARGVVSKRSHNRTRKPLDIGVVDAGGEIRLARTADLDEPWLLLRVAAA AARSGRSVPPHVWEQLRELPELPQRWPAGATDAFFSLLSSPLNTPRLIQEMDAHGLWERI VPEWEHIRGLLPRERTHAHTVDYHSILTVARCAEARTSVARPDLLLLVGLYHDIGKGYGR PHELVGAEIVARAAAKLGLDLADRSRVQTVVAEHTTLARIVSRTDPLSDEARDELLEAVR YDYLTLALLVVLARTDAESTGPGVWNHRLEQGIETVSGRAFAQLEALRPVRPLVAADRDI GLRHNPEDDSFTVLWRGSYQREAVRALALIAALGWNILSSRLVRTEEGYAGEFDIRALHG AIDLATVEERLVQSYKSGTYTVLPDFVPGPATAMWTRGVFEVRIDDYPGTLGHVLALLPE CEWLSTTTPGATMVLHAVPLGDVPRATLVRNVTQALVNG >gi|227860835|gb|ACLH01000085.1| GENE 12 13370 - 13708 552 112 aa, chain - ## HITS:1 COG:Cgl2011 KEGG:ns NR:ns ## COG: Cgl2011 COG0347 # Protein_GI_number: 19553261 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Corynebacterium glutamicum # 1 112 1 112 112 158 72.0 2e-39 MKLITAIVKPFTLPDIREALEQHDVHGLTVTETQGFGQQRGHSEVYRGAEYATDFVPKVK LEVVTSDEQMEDILSAIVDAAYTGKIGDGKIWITPVEDVIRVRTGERGEAAL >gi|227860835|gb|ACLH01000085.1| GENE 13 13712 - 14665 935 317 aa, chain - ## HITS:1 COG:Cgl2012 KEGG:ns NR:ns ## COG: Cgl2012 COG0004 # Protein_GI_number: 19553262 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Corynebacterium glutamicum # 1 283 163 447 454 336 67.0 3e-92 MTFAYFPLAHMVWGGGVLSHAPHSLAAWLFGVSNGEALIAPIDFAGGTVVHISAGAAALV LAIVVGPRAGFPKHVDRPHNLPMVMLGAALLWFGWFGFNGGSAFAADGLAGVAWLNTTVA AAAAMLGWMLVERIRDRAATSLGAASGAIAGLVAITPAAGALSPLGSIALGFLGGIIACL CISLKYRWGFDDSLDVVGVHLCAGLWGTIGLAFFATDNGILTGHFSEGLKLLVVQTLIAV VAMLVSGLVTLLAALLIRATMGWRIKDEAKGIDLGEHRETAYDFRESVASHRRHTHDARI SPAPTVQPRVDTAGAKE >gi|227860835|gb|ACLH01000085.1| GENE 14 14827 - 15195 463 122 aa, chain - ## HITS:1 COG:Cgl0265 KEGG:ns NR:ns ## COG: Cgl0265 COG1320 # Protein_GI_number: 19551515 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhG subunit # Organism: Corynebacterium glutamicum # 1 106 1 106 106 101 57.0 3e-22 MTIAEIIASVLLVVATLLVIATAIALWRAPDALTRVNLLGPTVGLAVPLLLVAKLVVDFA ENGFSLWSLVRVLIACFGVWIIGSVGSFYMGRSIYGVTVTDVKYAKRMRQQAQTVEASEE EI >gi|227860835|gb|ACLH01000085.1| GENE 15 15200 - 15472 209 90 aa, chain - ## HITS:1 COG:no KEGG:cauri_1593 NR:ns ## KEGG: cauri_1593 # Name: mnhF # Def: putative monovalent cation/H+ antiporter subunit F # Organism: C.aurimucosum # Pathway: not_defined # 1 90 7 96 96 143 100.0 3e-33 MSAFQWVVFVCVFLIGASVCSALVLALRSRDELTRTVMSDMVFYGMMCMYFAWAMTNHAS IVYDIAMLAGIAAGVLPTLSMARIISKGRR >gi|227860835|gb|ACLH01000085.1| GENE 16 15487 - 16041 607 184 aa, chain - ## HITS:1 COG:Cgl0267 KEGG:ns NR:ns ## COG: Cgl0267 COG1863 # Protein_GI_number: 19551517 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhE subunit # Organism: Corynebacterium glutamicum # 5 135 2 132 151 134 51.0 9e-32 MKSAVHAVVYALWLIKEIFVAGFSLAMESFKPQNNYRPVVLRYPLRVTSAWEIFWFTSSI TATPGTLSLGLREPVAEGLPRIVLVQAVMGDDPSSVMVDLADMEERLAPRVKGIDYGVPG QGPTEELAPTFYEYPLDTLGRHMRAPDIAKADDTPLAANDVEKYSVWPLRQVVPGKDARK DDKK >gi|227860835|gb|ACLH01000085.1| GENE 17 16042 - 17583 1921 513 aa, chain - ## HITS:1 COG:Cgl0268 KEGG:ns NR:ns ## COG: Cgl0268 COG0651 # Protein_GI_number: 19551518 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Corynebacterium glutamicum # 5 504 3 502 510 548 65.0 1e-156 MYDTVSALLPLFPAVPLVSAALALLAPWHRVRDAIMLIVPGVGIFASFALLLYTMNNGVV AHSVGNYVGNAGIAFAADTFSALMLITTMIVAFGANWFAIVGGETKSRYYPSLTLILITG VCGALLTADLFNFFVFIEVMLLPSYGLITMSGTWSRLAAGRAFVLVNLFASTLLVVGVGY IYSVAGVVNLAALTGAAAGNGPVTVASGIIVIAIAAKAGVFPVQSWLPRTYPGTSAAVMG LFSGLHTKVAVYMLYRLWVQLFDMDQRWGTLIIVIMIISMVVGAFGGLAENSIRRVLGYQ MLNGMPFILVMMAFTTHDAQRALAAGILYTIHHMLTVGSLILASGAIEETYGTGRLNKLS GLARRDPIIAWIFAAGAFSVVGFPPFSGMWGKVLIVAEVARTGGAWAWTVIAVIIIASFA AFLAMLRVWRRVFWGKDLPKEKVPDELVIRKKLMAPSAALILGSLTMFILSGPVISLTME ASADLLDTEAYAHAVLGDDPVALPDIDSLQEGR >gi|227860835|gb|ACLH01000085.1| GENE 18 17584 - 18021 467 145 aa, chain - ## HITS:1 COG:Cgl0269 KEGG:ns NR:ns ## COG: Cgl0269 COG1006 # Protein_GI_number: 19551519 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhC subunit # Organism: Corynebacterium glutamicum # 1 108 1 108 127 127 60.0 6e-30 MILALTIALLIGSAVYLIQQRGLVHIVLGMMAFGHGANLMLLATGVYSYRGESFPSQVGM DQMADPLPQAFVLTAVVISMATSTILLTMAAMGANDDTDVVEPVDDNTIDHAFSTLGRDT QNREILERSANKMDRLKELEQEEDN >gi|227860835|gb|ACLH01000085.1| GENE 19 18018 - 20999 3149 993 aa, chain - ## HITS:1 COG:Cgl0270_1 KEGG:ns NR:ns ## COG: Cgl0270_1 COG1009 # Protein_GI_number: 19551520 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Corynebacterium glutamicum # 1 519 1 520 520 607 70.0 1e-173 MTLLYVVLLAAVAVALAPVAVKVADRAAGYPLAGIFIVAAALLAKEFPALARGEELSYSV TWVRDVIAPGVDVNLAFRGDALGIFFAMLALVIGAVVFTYSAAYLPKGKGNVSFYVLMTA FTLSILLLVLANDVVVLFLAWELVSLASFMLIARSGKSGEAGSQRTLILTFIGGLTLLSG VAIAATAAGTTSLEGILASDVWAERTGLTAGVAILIAVSAFTKSAQFPFHFWLPEAMAAA TPVSAFLHAAAVVKAGVYLLIRFSTIFHDVAAWNWLLIVAGMGTAVMSAVFAVQKTDLKK LTAYSTVSHLGWIVATIGVGTPFAIAAALVHTLAHALFKSSIFMLIGVIDHEAGSRDIRR LGVLWNKMPWTFGSMLIGAASMAAVPPLFGFVSKEGMLTAFEEAPIGSTGQALLLIVAGV GAFFTFTYSAKIIFGAFFDGPRNMSHVHEAPVRLWLPAALPGVMSVPIIFVMGALDKPLD NIVAAIGMEGHSHLALWHGLNVPLLISVVVLIAGIVALFFRGPLWTAMEERQLLPRTGNQ ILKWIQDVCAAFGRFVGRMSDTHNPSKLILPIVLLVIILAGSTLVSTGVDGVALNPRVDG LDNPWDLLPLGIVALSMFGLVRTRNRLTGAVMIGTAGTGVTLQMFLLGAPDVALTQFTVE ALSVIVMMMVLRYLPEKFHPVQNNNRKVGSIVVAVLAGLTAFLGVWALMGRHERSDLAMW YLNNAPDITGGDNVVATIIVEFRALDTLGELSVLGMAAVVIAAVTSTLPRFPFTSGTRPA PFGQSQLNSVPLRKGIAVAIPILVVMSFIVFYRGHQASGGGFPAALIMGAAIGLTYLSRG TDEIVFGRMTPIHLTGVGIIVALVAGFIGYIPTSHSSGGFLTAIHGHALGQHWTTSLIFD LGIYLAVLGMLTMAINALGGYLRPGTERDFLPWVHDDDSALPNTPRVVLEDVDDPYPESI NPSSDPLALLNESEARHRASSPHHTSAQEEKNS >gi|227860835|gb|ACLH01000085.1| GENE 20 21188 - 23098 627 636 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 337 635 21 322 336 246 43 1e-64 MNTTFLWIAIAVIVLILLVVLFVVLGKKRGESKKVSFEKPAEEPKELTQQQKSGNYQAKS GFNFAPAGGGATKEPVPAAKAEKPAPAEPKAQPQAEKRSEQRDATELANAQLEGAEETPK DTKPKAEPKPTVDAKSEAEAKPEVKPEPKPQAEPKPEPVADAKPVSEPEPAAQKEPAKEE EDKDSSAGVVAAGAAGAAAAGAAVSGAAAVDKDKEDTEEAVPATEPENAEPEIAEPEPIV EAPKAEEEPSVQVEAEEVTAAEAEDVEADTDAEAGADATETEAEEAAAAAGAQAASASAA LEAEPEELEVSDDAEVVEAPAAQPQEDIAPAAGRLGKLRGRLSRSQNAIGQGLMGILSAG DLDDDAWEEIEDTLIMADLGTKSTMQVTDSLRDKIAERGVSSEAEARAMLREALIEVGHP EMDRSIKAMPNEGKPAVIMVVGVNGTGKTTTTGKLARVLVSMGHNVLLGAADTFRAAAAD QLETWGRRVGATTVRGKEGADPASVAFDAVAAGVDQGVDVVLVDTAGRLHTSVDLMDQLG KVKRVVEKKTDVDEVLLVLDATVGQNGLTQARIFRDVVDITGVVLTKLDGTAKGGIVFQV QEELGVPVKLVGLGEGADDLAPFEVEGFVDALLGEK >gi|227860835|gb|ACLH01000085.1| GENE 21 23173 - 24192 1133 339 aa, chain - ## HITS:1 COG:Cgl2015 KEGG:ns NR:ns ## COG: Cgl2015 COG1196 # Protein_GI_number: 19553265 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Corynebacterium glutamicum # 1 317 831 1147 1155 414 76.0 1e-115 VDKHAQDLAARTAQALERAAEERDELVTQRGVLQGRAQSAKQAVSSTRQQLDRLTDSAHN SEIARSQAQVRVDEAEGKIVEQLGIAIPDLLKEYTPGEDFDRSAETKRLKQAEKDLNSLG KVNPLALEEYKALEERYSFLSTQLDDVIQARKDLTGVIEDVDAQILQLFTDAWHDVEAEF PKVFQTLFPGGEGRLILTEPDDMLATGIEVEARPPGKKVKRLSLLSGGEKSLTALAMLVA IFRARPSPFYVMDEVEAALDDVNLRRLIALFEELRKDSQLIVITHQKPTMDVANVLYGVT MRGDGVTRVISQRMTRAGEAPGTAQAAEDATRLGVDAPR Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:58:04 2011 Seq name: gi|227860834|gb|ACLH01000086.1| Corynebacterium aurimucosum ATCC 700975 contig00167, whole genome shotgun sequence Length of sequence - 9891 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 5, operones - 1 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/1.000 - CDS 1 - 2419 2419 ## COG1196 Chromosome segregation ATPases 2 1 Op 2 . - CDS 2430 - 2735 322 ## COG1254 Acylphosphatases 3 1 Op 3 . - CDS 2736 - 4262 705 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 4 1 Op 4 4/0.000 - CDS 4297 - 5145 524 ## COG0266 Formamidopyrimidine-DNA glycosylase 5 1 Op 5 4/0.000 - CDS 5160 - 5930 841 ## COG0571 dsRNA-specific ribonuclease 6 1 Op 6 . - CDS 5927 - 6466 518 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 7 2 Tu 1 . + CDS 6600 - 7181 519 ## cauri_1605 hypothetical protein 8 3 Tu 1 . - CDS 7178 - 7924 827 ## COG3599 Cell division initiation protein - Term 7977 - 8009 6.3 9 4 Tu 1 . - CDS 8049 - 9395 1820 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 10 5 Tu 1 . + CDS 9480 - 9891 144 ## COG1929 Glycerate kinase Predicted protein(s) >gi|227860834|gb|ACLH01000086.1| GENE 1 1 - 2419 2419 806 aa, chain - ## HITS:1 COG:Cgl2015 KEGG:ns NR:ns ## COG: Cgl2015 COG1196 # Protein_GI_number: 19553265 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Corynebacterium glutamicum # 1 806 1 808 1155 665 59.0 0 MHLKSLTLKGFKSFASATNLKFEPGICAVVGPNGSGKSNVVDALAWVMGEGSAKTLRGGK MQDVIFAGAGDRKALGRAEVTLTIDNSDGALPIDYSEVSVTRRMFRDGASEYEINGAKAR LMDIQELLSDSGIGREMHIIVGQGKLAEILESRPEDRRAYIEEAAGVLKHRRRKEKAQRK LTGMQANLDRLQDLTDELGKQLKPLARQAEAAQRAATVQADLRDARLRLAGDRVVRLRAT FDDAEKRAAVLAEQVEEVTAQLEEATEIQLEVEAELGDVTPRAEAAQKLWFELSTLSERI SATQRIAAERASNVGSQVAYAGQAPEELEARAQRADEEHEELLAAAEEAAERLESIREEV AERREAFEAADKEHMAQLRAIADRREGVVRLIAAEENLAGQVSSAESELARQEETLANTK SRTRGAQAEADEVADKLEHLAAEREPLEEAHVRAASESAAADKRLEQLRDAQREHERTVY SLRARIDTLGQTVPEALELGEGFKPLAEFISTRYETAVAAALGSFAEAQAGAVSGDIVRD LAAASRTPLIDVSAEPTGSAWRLDADLPSGANWLLDQMVLVPEVSAAVTRLLSDVVLVDD YAAARELIAEDPRLRAVTAEGLLVGEGWVEAGTGAVSTVEVSGQIAEAEQQLETATHELE ELSGTLEGAKLAADDARVGAASAKAALREHDHELEAWKRDHQRLLKQYEANKAEHEKAAA RATDIEVQLARLREELAEARDRLSRVDAEEQADEPSSVERDAASAALEQVKAMEVEAQMA ARSAEEKVGQAAGRGEALRRQAQHER >gi|227860834|gb|ACLH01000086.1| GENE 2 2430 - 2735 322 101 aa, chain - ## HITS:1 COG:MT2991 KEGG:ns NR:ns ## COG: MT2991 COG1254 # Protein_GI_number: 15842467 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Mycobacterium tuberculosis CDC1551 # 12 101 7 93 93 92 60.0 3e-19 MAQQAAATGNERLTAFVHGHVQGVGFRWWTRSRALELGLAGHATNLQDGRVQVVAEGPRA DCEKLLALLREEPSTTRRPGVVNAVVEQWAAPRGESGFIER >gi|227860834|gb|ACLH01000086.1| GENE 3 2736 - 4262 705 508 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 7 450 5 440 456 276 37 6e-74 MQEIFSTVIGVINDSLWSYVLPWLLIAAGLFFGIRTVLVQIRMLPDMFKAVVEKPKGVGA DEDADYGGISAFKAFTISAASRVGTGNVAGVAVAISVGGPGAVFWMWLIAILGGATAFVE STLAQLWKVREGDTYRGGPAYYMSRGLGWKPLATIFSVAIAITFGWFYNAFQTNAISDSL AASFGQDSSAFKAGVGIAVVAVSGLIIIGGVQRIASMTQFIVPFMAGAYLIMGLIVVVLN FDKVPDMFVSIIGSAFGFREAAGATVGMAMLKGIQRGLFSNEAGEGSAPNAAATATVSHP VKQGLVQTLGVYFDTLVVCTITAFIILLGTDFERFGSDAIEGVTLTQNALSGVVGEWGIH FVTFILFFLAFSSILGNYYLAESNVEYLSEKKWVLWTFRLIVLAFVFYGAVAPLGTVFDL ADTGAAIMVLLNVCAIVPLSGVAIKLLKNYNEQRRKGLDPVFHRDMLPELQNVECWDGTD PVTRRSAEDRRRLKHEHDLGDRTNLREY >gi|227860834|gb|ACLH01000086.1| GENE 4 4297 - 5145 524 282 aa, chain - ## HITS:1 COG:MT2994 KEGG:ns NR:ns ## COG: MT2994 COG0266 # Protein_GI_number: 15842470 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 273 1 286 289 265 52.0 5e-71 MPELPEVESVRRGLEPYVVGRSFAAVEVHHPRANRGQEAPLSALLVGRKIAAVARRGKFM WLEFADEDHSDPARDVLFIHLGMSGQVRIGEVDSPHVRIAAVLDDTTRLSFVDQRTFGYW RLGPWLSMAHIAPDPLETDFDLTAAGRRLRAKRTVVKAALLDQTVLSGVGNIYADEALWA VQISPLKKASALRQRDAVAVISAAADVMRAALAVGGTSFDALYVNVNGESGYFDRSLHVY GRGGQPCERCGEEILKTVLGGRGTHYCPSCQNRGVGRKSAAN >gi|227860834|gb|ACLH01000086.1| GENE 5 5160 - 5930 841 256 aa, chain - ## HITS:1 COG:Cgl2022 KEGG:ns NR:ns ## COG: Cgl2022 COG0571 # Protein_GI_number: 19553272 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Corynebacterium glutamicum # 3 244 4 245 247 310 69.0 2e-84 MSKKKKLTGEQALAAAFAEVDHAPLLKALGVEINDELLCLALTHRSFANENGHLPNNERL EFLGDAVLGLSIAAKLYEKYPSRPESDISKMRASIVSRYGLSDVAREIGVGEHVLLGKGE QSTGGRDKDSILADTTEAILGAIYRQHGFEVARGVVLKLFAAKIDNAVVSGRHMDWKTTL QELCAELKAAMPVYSATSTGPEHDQTFNAVATVAGLTVGRGTGHNKKLAEQQAAEEACQA LRETPLLVQGTAGKES >gi|227860834|gb|ACLH01000086.1| GENE 6 5927 - 6466 518 179 aa, chain - ## HITS:1 COG:Cgl2023 KEGG:ns NR:ns ## COG: Cgl2023 COG1399 # Protein_GI_number: 19553273 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Corynebacterium glutamicum # 1 179 1 178 178 158 53.0 4e-39 MKSPLKFDVTELLRSQGTDALPEHRVQTGPAPERIGVEMIGIPEGTEVKVDATLTPLGSG VLVDADVTGTLSGECARCLAELHPELDLHVSQVFSADESFVSGDEAEEEDRGSGDEVPEI KDGILNLLQTVIDEAGLSLPFAPTCEEGCEVDAPDGVTTGVSGEEERVDPRWSGLEKFL >gi|227860834|gb|ACLH01000086.1| GENE 7 6600 - 7181 519 193 aa, chain + ## HITS:1 COG:no KEGG:cauri_1605 NR:ns ## KEGG: cauri_1605 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 193 1 193 193 296 100.0 3e-79 MSYTATDTASLSVTARELALSYPLQCLAPAVALALAGMACRHVFTRHRPSIFGNAGYSLH RVALASTLAGLMVGAVSFLPLHFEPILILSSALFSLFAALIAWRARESFSAAGMGIGLMM LTVGAVDVALLLADAAWGPISEPHTPGTDFGIMWVLYALPGLVSAGLAAAFSTMPAKEAA RIRRAERLSISPL >gi|227860834|gb|ACLH01000086.1| GENE 8 7178 - 7924 827 248 aa, chain - ## HITS:1 COG:Cgl2024 KEGG:ns NR:ns ## COG: Cgl2024 COG3599 # Protein_GI_number: 19553274 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Corynebacterium glutamicum # 1 220 1 231 263 182 58.0 5e-46 MYRVFESLDELVRNLEQAYAVPMTSNCMVPRHEMLALLDDLRNALPVEMDDAQDVLDKQD EILQGAEERAEQIISEANAEADDTVTRAREDSDAMLADAQHRATTLVAQAEDEASNLVDN ARSDAERTRAQADEEYQRAVAAGQAEQDRLVSESEVVRRADDEAHRIVETAHSESNRLRT ECDEFVDAKLGEFETTLSDLLRTVNNDRSALRRGAGVRSRGEARGEGRGAARETREPARR APRAPRDY >gi|227860834|gb|ACLH01000086.1| GENE 9 8049 - 9395 1820 448 aa, chain - ## HITS:1 COG:Cgl2027 KEGG:ns NR:ns ## COG: Cgl2027 COG0334 # Protein_GI_number: 19553277 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Corynebacterium glutamicum # 1 448 1 447 447 712 77.0 0 MSIDQQISDYYSKLLKRNAGEPEFHQALAEVLDSLKIVLNKDPHYADYGLVERLCEPERQ LIFRVPWVDDGGQIQVNRGFRVQFNSALGPYKGGLRFHPSVNLGIIKFLGFEQIFKNSLT GLPIGGGKGGSDFDPKGKSDAEVMRFCQSFMTELHNHIGEYRDVPAGDIGVGGREIGFLF GQYRRLENKHESGVLTGKGLSWGGSLVRTEATGYGLVYLTSEMMKTHGESFDGAKVIVSG SGNVAIYAAEKVQQLGGTVVAMSDSSGYITTPNGVDLELLKEIKEVRRERISTYAGEAGA GVEYHEGGNVWEVSADVALPCATQNELDGEDAKLLVKNQVRYVAEGANMPCTPEAAHYFV ENGIAFAPGKAANAGGVATSALEMQQNASRDSWSFEYTDQRLHEIMSNIFRNIDKTSKEY GLEGDYVAGANIAGFKKVADAMLAQGVI >gi|227860834|gb|ACLH01000086.1| GENE 10 9480 - 9891 144 137 aa, chain + ## HITS:1 COG:Cgl2028 KEGG:ns NR:ns ## COG: Cgl2028 COG1929 # Protein_GI_number: 19553278 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Corynebacterium glutamicum # 31 137 14 106 374 83 53.0 1e-16 MQDGRTGERFKGWSGCENFFSHLCHILMGMRILVAPDSFKGTATAAEAAAAIALGARRAL SSSPHADTAKVTTLPMADGGEGTAEVLASAAVHRHGTAGQTITLPTTDAIGRLTEASYQL VGDTAFIDVAAATGLPA Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:58:18 2011 Seq name: gi|227860833|gb|ACLH01000087.1| Corynebacterium aurimucosum ATCC 700975 contig00168, whole genome shotgun sequence Length of sequence - 31487 bp Number of predicted genes - 32, with homology - 31 Number of transcription units - 16, operones - 5 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 816 770 ## COG1929 Glycerate kinase - Term 807 - 847 -0.9 2 2 Tu 1 . - CDS 848 - 1246 550 ## cauri_1609 hypothetical protein 3 3 Tu 1 . + CDS 1283 - 2491 1179 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Prom 2533 - 2592 2.2 4 4 Tu 1 . + CDS 2636 - 5026 3227 ## COG0058 Glucan phosphorylase - Term 5020 - 5069 5.3 5 5 Tu 1 . - CDS 5178 - 6602 1701 ## COG0469 Pyruvate kinase 6 6 Op 1 1/0.000 - CDS 6900 - 7808 918 ## COG0682 Prolipoprotein diacylglyceryltransferase 7 6 Op 2 . - CDS 7850 - 8677 638 ## COG0134 Indole-3-glycerol phosphate synthase - Prom 8734 - 8793 2.8 - Term 8807 - 8842 6.1 8 7 Op 1 . - CDS 8848 - 9507 566 ## cauri_1615 hypothetical protein 9 7 Op 2 24/0.000 - CDS 9500 - 9910 344 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 10 7 Op 3 3/0.000 - CDS 9907 - 10671 759 ## COG0107 Imidazoleglycerol-phosphate synthase - Term 10715 - 10763 -0.9 11 7 Op 4 3/0.000 - CDS 10792 - 11595 471 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 12 7 Op 5 25/0.000 - CDS 11600 - 12382 776 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 13 7 Op 6 1/0.000 - CDS 12413 - 13048 456 ## COG0118 Glutamine amidotransferase 14 7 Op 7 . - CDS 13045 - 14265 1125 ## COG0477 Permeases of the major facilitator superfamily 15 7 Op 8 . - CDS 14316 - 14498 162 ## 16 7 Op 9 13/0.000 - CDS 14504 - 15136 712 ## COG0131 Imidazoleglycerol-phosphate dehydratase 17 7 Op 10 19/0.000 - CDS 15196 - 16299 1273 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 18 7 Op 11 . - CDS 16303 - 17652 1370 ## COG0141 Histidinol dehydrogenase - Prom 17693 - 17752 2.0 + Prom 17620 - 17679 4.2 19 8 Tu 1 . + CDS 17804 - 18727 630 ## cauri_1626 hypothetical protein 20 9 Tu 1 . - CDS 18686 - 19126 441 ## cauri_1627 hypothetical protein - Term 19181 - 19242 6.0 21 10 Tu 1 . - CDS 19276 - 20010 1081 ## cauri_1628 putative secreted protein - Prom 20049 - 20108 1.9 + Prom 20104 - 20163 1.5 22 11 Op 1 1/0.000 + CDS 20220 - 20807 364 ## COG1309 Transcriptional regulator 23 11 Op 2 . + CDS 20822 - 23050 2727 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 24 12 Tu 1 . + CDS 23104 - 24489 1377 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 24598 - 24632 -0.5 25 13 Op 1 . + CDS 24641 - 25249 494 ## cauri_1633 hypothetical protein 26 13 Op 2 . + CDS 25302 - 26306 879 ## COG2357 Uncharacterized protein conserved in bacteria + Term 26555 - 26587 0.6 - Term 26187 - 26235 4.0 27 14 Op 1 . - CDS 26303 - 26689 405 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 28 14 Op 2 . - CDS 26696 - 26932 328 ## cauri_1636 hypothetical protein 29 14 Op 3 . - CDS 26967 - 27605 708 ## COG1739 Uncharacterized conserved protein 30 14 Op 4 . - CDS 27605 - 28888 1369 ## COG1171 Threonine dehydratase 31 15 Tu 1 . + CDS 29067 - 30989 2334 ## cauri_1639 alkaline phosphatase (EC:3.1.3.1) 32 16 Tu 1 . + CDS 31094 - 31487 206 ## cauri_1640 hypothetical protein Predicted protein(s) >gi|227860833|gb|ACLH01000087.1| GENE 1 1 - 816 770 271 aa, chain + ## HITS:1 COG:Cgl2028 KEGG:ns NR:ns ## COG: Cgl2028 COG1929 # Protein_GI_number: 19553278 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Corynebacterium glutamicum # 1 266 100 368 374 190 46.0 3e-48 AATGLPAVSDALDPLHADSYGTGVLVADAESRGAKHIVLGLGGSASIDGGLGILAALGAA AHDARGYALPKGGAPLVNLDHIDTAQLNMKAAMLDYTLVTDTRAVPVQAATMYGPQKGAE GEQVALLAGAMLRLCEVTETDPQAEFFGAAGGIPIALSWLSRTLWGTSEHCHIVPGGQYV AEALDLPARIAEADLVLTGEGRFDEQSLTGKVVGTLADMTSPPTLGIIAGSSTAPAPQGT LLEELDGKEEGDVAQHLSNAAERLVRTVLQN >gi|227860833|gb|ACLH01000087.1| GENE 2 848 - 1246 550 132 aa, chain - ## HITS:1 COG:no KEGG:cauri_1609 NR:ns ## KEGG: cauri_1609 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 132 1 132 132 238 100.0 6e-62 MPLIHFDVLVPDAQAERVAEIFNAATHKLVDNGSLASAEVTRVPDPDLPEGLEEQLRQTY RDEHEERDLEDANVYRYAIDVDGVKGSVNQLTMVLARLLTPHSVLPKDHVLLEDELAHER PAIFPWAVQVTP >gi|227860833|gb|ACLH01000087.1| GENE 3 1283 - 2491 1179 402 aa, chain + ## HITS:1 COG:Cgl2031 KEGG:ns NR:ns ## COG: Cgl2031 COG1473 # Protein_GI_number: 19553281 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Corynebacterium glutamicum # 6 401 1 419 421 455 57.0 1e-128 MADPTLSRLSSLLLEDSVDLSWQRAFYEDMHAHPELSHQEERTAGRILEQLSKYDCELVT GIGGHGIVAIFRNGDGPTALMRADFDALPVAEETGVPFAATNGAMHACGHDIHTTALLGA CAILDAHRDAWHGTFLALFQPAEESSMGAKYMIADGLTQRVPTPDVCFGQHVMPGPAGQV QSTAGPILAGCDSLRIRITGRSAHASMPHEAIDPSYVAAMVVTRLQAIVGREVPPHDFFV ISVGELHSGDKNNIIPGSAELVLNTRYYKPELAERVYASLERMVRAECEASGCPAEPTFE YFAHGEVTDNDASTHETVRSAFDAVFADLSVSATPSTVSEDFCYLPQAWGVPYNFWFIGS TPENLLDNPPVNHQSIFLPDYEPTMRSATHAGAAAVLSFLGR >gi|227860833|gb|ACLH01000087.1| GENE 4 2636 - 5026 3227 796 aa, chain + ## HITS:1 COG:Cgl1277 KEGG:ns NR:ns ## COG: Cgl1277 COG0058 # Protein_GI_number: 19552527 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Corynebacterium glutamicum # 2 792 4 791 795 1191 74.0 0 MSQPQHSDFQTAVPGHVRAAAGVSPSAATNRKFWSGLSSSVMEQIADNWEATRNAYSAAR QQHYFSAEFLQGRALLNNLTNVGLVDEARAASKAAGHELSDVLEAEHDAALGNGGLGRLA ACFLDSAVTQNYPVTGYGLLYRYGLFRQSFDNGFQREEPDAWMENGYDFIIRRASEQRLV HFDDMDVRAIPYDMPITGYGTDNVGTLRLWKSEPIDEFDYDAFNSQRFTEAIVERERVMD ICRVLYPNDTTYEGKVLRVRQQYFFVSASLQQMIDNYIEHHGEDLTGFAEYNCIQLNDTH PVLAIPELLRLLLDEHGMSWDEAWKVVTETFAYTNHTVLAEALESWEVSIFQKLFWRIWE LVEEIDRRFREDMAQRGLDQGRIDYMAPVSDGHVHMAWIACYAAYSINGVAALHTEIIKA DTLSEWHELWPEKFNNKTNGVTPRRWLRMCNPRLSDLLTEQAGSDAWVTDLTELAKLAPL AEDEKVLRQLINIKRANKQDFAAWIDAHQGATVDPDSIFDVQIKRLHEYKRQLMNALYIL DLYFRIKVDGENVPKRTFIFGAKAAPGYVRAKAIIKLINTIGDLVNNDPATKDLLNVVFV ENYNVSPAEHIIPAADVSEQISVAGKEASGTSNMKFMMNGALTLGTMDGANVEIVEAVGE DNAYIFGARNEDIPQLRAEYNPGELYNTVPGLARVLDAFTDGTLGSENAGMFGDLRSSLL DGFGENAQDTYYVLGDFADYRETRDRMAADYDADELAWAKKAWLNICYSGRFSSDRTIAD YANEVWKLTPTPISHV >gi|227860833|gb|ACLH01000087.1| GENE 5 5178 - 6602 1701 474 aa, chain - ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 2 472 3 473 477 728 80.0 0 MLDRRTKIVCTLGPAVASKEGILGLVEAGMNVARLNMSHGEHADHEANYRWVREATDETG HAVGVLADLQGPKIRLGRFVNGEEMWKDGEIVRITVEDVEGTHDRVSTTYKNLAKDAKPG DRLLIDDGKVAVVCKEVDGNDVVCEVTEGGPVSNNKGVSLPGMDISVPALSEKDIADLRF ALKLGVDMVALSFVRSPADVDKVHEIMDEEGRRVPVIAKLEKPEAVDALESIVLAFDAIM IARGDLGVEVPLEQVPLFQKRAIQIARENAKPVIVATQMLDSMISNLRPTRAEASDVANA VLDGADAVMLSGETSVGIDPQNVVRTMSRIVTNAEQGGQVPPLSHVPRTKRGVVSYSARD IAERLNAKAIVAFTTSGDTAKRVARLHSALPLLAFTPHPAVRSQLALTWGAETFLSDSVE STDDMMAAIDEALLGMDKYKEGDMIVVIAGTPPGISGNTNMIQVHELGQTLRDK >gi|227860833|gb|ACLH01000087.1| GENE 6 6900 - 7808 918 302 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 6 285 3 282 316 428 72.0 1e-120 MQIYYLANIPSPPQGVWHLGPVPIRAYAMCIIVGILVALWMTLRRYTARGGNPDVVWDAA LVVIPAGIIGGRLYHVITDNDKYFCSTCDPLDALKITNGGLGIWGAVALGAVAVWLMFKV KGIPLGPFADAVAPGLILAQAIGRLGNWFNQELYGRETTVPWALDIYYRVNESGEYAPIS GRSTGEVIASVHPTFLYELLWNVAVCVFLLWAHKAFKLGHGRVFALYVAGYTAGRFVVEN MRADDATLIFGLRVNVIVSVVCFVVALIVYIRLPRGQETPEEVDPARSTDAGDSVGTADS QR >gi|227860833|gb|ACLH01000087.1| GENE 7 7850 - 8677 638 275 aa, chain - ## HITS:1 COG:ML1271 KEGG:ns NR:ns ## COG: ML1271 COG0134 # Protein_GI_number: 15827653 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Mycobacterium leprae # 7 271 7 268 272 208 47.0 9e-54 MPTPIAVDHLVAGVLADVAAREARVPFKEVKARSRDMDAPRDAAQALLRSGCSIITEIKR AVPYGGEIVHLDGPHSVATLARKLEEAGVHVMACQTDRRRFHGSLEDMRVARAAIDIPML CRDTIVDPYQIHEARCYGADAIPLQVELLDQARLESLLDRVESLGMTAILEVRTCAEVDR VIKAGGTVVAINAWSLASDALNREAFSTISPGLPESITRIAVGGVNSPRNVLSYASQGAD AILVGESIMAAQDPMALARSLVAAGQHPACPSRRS >gi|227860833|gb|ACLH01000087.1| GENE 8 8848 - 9507 566 219 aa, chain - ## HITS:1 COG:no KEGG:cauri_1615 NR:ns ## KEGG: cauri_1615 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 18 219 1 202 202 306 99.0 5e-82 MAKRTETKRSGAKRIGPVLMFAGAILLWLSSRMTWVTAAVEDDKAGSSVAELSGSLWSLE LIALSVVVLAGGVAAFALRRAGRRIVSVLTALAAAAAGWRPVALLTAGAEAERAQELLQG GTNDTSVDSATISDWATVLTADASTAGPVLAIVGAALALFGAVMVASNPGGDKPRSAKYE TPAVRQERLQEDLETSQDSGRVMWDALDADIDPTDPRST >gi|227860833|gb|ACLH01000087.1| GENE 9 9500 - 9910 344 136 aa, chain - ## HITS:1 COG:Cgl2040 KEGG:ns NR:ns ## COG: Cgl2040 COG0139 # Protein_GI_number: 19553290 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Corynebacterium glutamicum # 20 125 7 113 118 163 74.0 9e-41 MKEHKENSGHGSTDSEAVGDYELSEEIAQQLKRNEAGLVPAIVQSERGEVLMLAWMDDHA LAYTLATRRGTYYSRSRREYWIKGLTSGNTQEVVGARLDCDGDTVLLTVRQHGGACHTGD RTCFDARNLFREENNG >gi|227860833|gb|ACLH01000087.1| GENE 10 9907 - 10671 759 254 aa, chain - ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 254 1 258 258 360 81.0 1e-99 MALAVRVIPCLDVDNGRVVKGVNFENLRDAGDPVELAARYGQVGADELTFLDVSASKDGR GTMLDVVRRTADQVFIPLTVGGGVRSVDDVRELLRAGADKVSVNSSAIARPELLRELADV FGSQCIVLSVDARRAADFPSGFEVTTHGGTRSAGLDAVEWAKRGEELGVGEILLNSMDGD GTKAGFDIELIEAVRAAVSVPIIASGGAGKAEHFPPAVDAGADAVLAASIFHFGEVEISE VKEALAAAGKEVRQ >gi|227860833|gb|ACLH01000087.1| GENE 11 10792 - 11595 471 267 aa, chain - ## HITS:1 COG:Cgl2042 KEGG:ns NR:ns ## COG: Cgl2042 COG0483 # Protein_GI_number: 19553292 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Corynebacterium glutamicum # 11 261 2 256 275 214 45.0 2e-55 MAPMTGPSASDPRELVAFAEAAVDHVDDLFRRGLGAAPARFKGEGDFATEVDLVIEQQLR QTLSQLTGIPVLGEEYGGDLQETIWVVDPVDGTANYSAGNPCCGILVTLLHEAKPVVAVA DFPLLNRRVVAAHGMPLRTSGGPSTGFGGGEEAQGFDEARGHVGCSSHLPTGLFNDLRET GLRPRMTGSVGLDNAFVAQGVFDGAVNFSPHPWDNAAGALMIKAAGGRVSDPEGNEWTAN SKGFVGGTPQVHATILDAIARNPRGAR >gi|227860833|gb|ACLH01000087.1| GENE 12 11600 - 12382 776 260 aa, chain - ## HITS:1 COG:Cgl2043 KEGG:ns NR:ns ## COG: Cgl2043 COG0106 # Protein_GI_number: 19553293 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Corynebacterium glutamicum # 1 245 1 245 246 363 78.0 1e-100 MSFTLLPAVDVVDGQAVRLDQGEAGSEKSYGSPREAALKWQAQGAQWLHAVDLDAAFGRG SNHELLAEITTSVDLNVELTGGIRDDETLARALATGARRVNIGTAALENPDWIAKALAEH GDRIAVDLAVRLVDGEWRTRGNGWVSDGGDLWEVLERLDAAGCTRFVVTDVSKDGTLQGP NIELLREVAAATEAKITASGGISTLDDLRELALYENEGIDSAIIGKALYEERFTLEEALA AVAEVTPLPEEEYIDPIEER >gi|227860833|gb|ACLH01000087.1| GENE 13 12413 - 13048 456 211 aa, chain - ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 6 208 5 208 211 305 69.0 4e-83 MSSHDVVVLDYGAGNVRSAVRALERVGATVTVTADPKLAVEADGLLVPGVGAFAACMEGL RAAQGPRIIGQRLAGGRPVLGICVGMQILFESGTEHGVHTEGCGEWPGEVTRLQAPVLPH MGWNTVELPSGSRMFEGVSAEDRFYFVHSYAARNWELETEITEPPKVAWSEYGGDRFVAA VDNGALWATQFHPEKSGDVGSQLLKNWIGTL >gi|227860833|gb|ACLH01000087.1| GENE 14 13045 - 14265 1125 406 aa, chain - ## HITS:1 COG:Cgl2045 KEGG:ns NR:ns ## COG: Cgl2045 COG0477 # Protein_GI_number: 19553295 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 8 400 34 426 438 380 54.0 1e-105 MIAVVSAFGAWSVLLPVVPLAVLDSGGSATLAGATTGVFMLATVLTQMATPMLLRIFGYR PIMAASALLLGLPALGHMLGDAAPIALGFSALRGIGFGALTVAENALIAEITPRRLLGKA TGIFGLFIGAAQMAFLPLGLAVASAFNYNTVYLLAAGLGLLGFFTCILVPQIKAAPVGLP DPTDTTPRAPMWKLVLVPALALTSFSVSYGVASNFISPAVRELDPERGAVLGGLMLSVIG GSAMIARYVAGVVADRVGQPGTLMIPAQAFSVFGVGLIAAVLWQEWSVWLLVFGTVIYGA GFGIVQNEALLSMFDRLPRERLSEGSAVWNIFYDGGTGLGSTVLGAVVAMSGYDGAFASG AAIIAVGLLMSTADRALGKTRVSELNDIQTRLRMIRRPRRPGKEAR >gi|227860833|gb|ACLH01000087.1| GENE 15 14316 - 14498 162 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVMVLVLFLVAGLLVGGAWAAYQNGSVLMTVVAGALAAVSVAAALVWFLDIFSAGLAAK >gi|227860833|gb|ACLH01000087.1| GENE 16 14504 - 15136 712 210 aa, chain - ## HITS:1 COG:Cgl2047 KEGG:ns NR:ns ## COG: Cgl2047 COG0131 # Protein_GI_number: 19553297 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Corynebacterium glutamicum # 14 210 6 202 202 291 75.0 6e-79 MSAGDAVRHNHGDRIGRAERVTGETKISVEINLDGTGQADISTGLPFFDHMLNAVCTHGS FDLRVHAEGDIDIDAHHTVEDTAIVLGRAFLEALGDKSGIRRFGSQLLPMDEALVEAVVD ISGRPYFVMNGEPENMEWQIIGGHYATVINRHFFETFATHSATTLHVNVRYGRDPHHITE AEYKAVARALRQATERDPRVNGVPSTKGAL >gi|227860833|gb|ACLH01000087.1| GENE 17 15196 - 16299 1273 367 aa, chain - ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 4 359 6 361 366 532 76.0 1e-151 MAELKDLPLREELRGSSAYGAPQLTVTNQLNTNENPYPPSEALVKDMVAAVEKHARELNR YPERDAVELRTALAEYVSEQTGVAVSVENVWAANGSNEVLQQLLQVFGGPGRSALGFTPS YSMHPILCAGTQTEFIACPRDADFRIDEKEALEAVAKHSPDVVFITTPNNPTGDVTPIDV VEKIVQAAPGIVIVDEAYMEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA DPAFVEAVMLVRLPYHLSVLSQIAATVALAHKEETLGTVAKLSAERDRVVAWLKELGYYV VPSESNFVSFGRFADQHAVWQGFLDRDVLIRDNGVPGLLRATIGLPEENDAFLSAAADLA DTVEMTN >gi|227860833|gb|ACLH01000087.1| GENE 18 16303 - 17652 1370 449 aa, chain - ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 1 440 1 435 442 556 71.0 1e-158 MLRTIDLRGEELTTSRLRRVLPRGGTDVSSVMGTVIPMVEKVRKGGAAAALDFGEKFDGI RPAAVRVPKAELKKAAEELDSSVRAAIEESIARVRAVHADQKPASHTTTLAPGATVTEVF QPIERVGLYVPGGKAVYPSSVIMNAVPAQEAGAAAMVVASPPQKEFGGLPHPTVLATCHM LGVDDVWAVGGGQAIGLLAYGDDEPVTGEEALEPVDIITGPGNVFVAAAKRAVQGAVGID AEAGPTEIAILADETANPVYVAYDLISQAEHDPMAASVLITDSEDFAAAVNAEVAQRFTA TANAERAAEALRGEQSGIVVVDDLEAGIAVADAYAAEHLEVHTKNARAVAERIRHAGAIF VGEYSPVPLGDYSAGSNHVLPTSGTARFSAGLSTHTFLRPVNLIEYDRAALGEVAQNVIA FATAEDLPAHGEAIAARFADDTDTQKEEA >gi|227860833|gb|ACLH01000087.1| GENE 19 17804 - 18727 630 307 aa, chain + ## HITS:1 COG:no KEGG:cauri_1626 NR:ns ## KEGG: cauri_1626 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 307 1 307 307 619 100.0 1e-176 MSNGADGLDSQSPSSLLARVENLAHREGLDCIRVTAHELLFPHPPLGETRAFMDTEGEPI LRFYTTHHGVLGFSDIPALSEFVNDWNHDCLSPHLILNYSAPTEVEVWGHSFLVVHQKPT TSQLSASVLPALHNAAACLEELADHFPVLTLPRPTTPEEQTELDGPVSTVDTARLGEILP TLGITRFQSDADEAVYAWINDVLFAFTIDSGPSLIIKGHWDPNLPGTEFSKIFLICNDWN RTNHSASAFCHSNIDGLQVRIDYAIMTGAGLSDAQLITALGRGIKHVLHGIDDISRDAVG SSPVAWP >gi|227860833|gb|ACLH01000087.1| GENE 20 18686 - 19126 441 146 aa, chain - ## HITS:1 COG:no KEGG:cauri_1627 NR:ns ## KEGG: cauri_1627 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 1 146 146 242 100.0 3e-63 MEDGGYVLGNVADVQFDSYITFVLITGFLGMALGLIAHRWGERYRGVGLLLWVALAALAG AASFYVFGGATATDIPENPGEFVEFVPNFSPGIAWLVGPFMAMFAYWSALFFDPPSVWHE SETVDDEAAVDDALGPSDGGGAHRIA >gi|227860833|gb|ACLH01000087.1| GENE 21 19276 - 20010 1081 244 aa, chain - ## HITS:1 COG:no KEGG:cauri_1628 NR:ns ## KEGG: cauri_1628 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 244 12 255 255 366 99.0 1e-100 MSFLTPAKKSLIAVALVAPLSLAACGSDDENAGDTASSAAKTTTTTKSKEKTSEEKTSEE KKEGKDKKDGEENKDNAAKPEGENPEAANQTLANPFEEGADPFQNMPKVEPVQGEAASQE DVDGINALVRGMYEQQTMRSFVKYLPEHTCAAIRNDPNSGLDQVDYNQVPDVPMNQLKDM MAAAGQDTSQMDGFDWSKTGVESINDVVVNGDDASATVNVNTSQGRDSSTMRFKRENGNW TFCG >gi|227860833|gb|ACLH01000087.1| GENE 22 20220 - 20807 364 195 aa, chain + ## HITS:1 COG:Cgl2053 KEGG:ns NR:ns ## COG: Cgl2053 COG1309 # Protein_GI_number: 19553303 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 187 5 187 191 94 32.0 1e-19 MHLSRDAIVSTALELLTQYGLADVTMRRVATNLGVAPGALYWHVTNKQSLIAAMTAEILA PVTGESTAELVSSLHRELQRWRDGAEVAIAGASFPESSASADLEKLFTKALQKEAPDASP EDRAVAARTLIHYTLGATFMEQSREQLSGAALGGTSPSTASTAPETTPVDATSVRAAELM VAGLRSLRSDHIHQN >gi|227860833|gb|ACLH01000087.1| GENE 23 20822 - 23050 2727 742 aa, chain + ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 11 722 8 717 836 1117 74.0 0 MTETRADLTPSRQVWPGSPSPLGSTFDGAGTNFAIFSEIAEKVELCLIDQDGNEERIELT EITAHVWHAYLPNVSPGQRYGYRIHGPYEPEHGLRCDPSKLLVDPYARAFDGDFDGDPSL YSYDIFAEEPGTGRNQDDSLGHTMLSVVINPFFEWHGDNRPHTPDNETIIYEAHVKGMTM THPDVPEELRGTYAGMAHPAIINYFKDLGVTAVELLPVHQFLQDDRLRQLDLRNYWGYNT FGFFAPHADYAYAKKPGEVVAEFKAMVRAFHEAGIEIILDVVYNHTAEGNHMGPTIAFRG IDNHAYYRLVDDNPEHYMDYTGTGNSLNVRHPHSLQLIMDSLRYWVTEMRVDGFRFDLAS TLARELDDVDKLATFFDLVQQDPVVSKVKLIAEPWDVGHNGYQVGNFPPIWSEWNGKYRD TVRDFWRGEPATMGEFASRLTGSSDLYANNGRRPTASINFITAHDGFTLRDLVSYNEKHN SENGEDNRDGESHNRSWNHGVEGPTDDEEIKKLRRRQVRNFLTTLLLSQGTPMLCHGDEL GRTQNGNNNVYCQDNEISWIDWSMLEQEKNSAMHGFTKRLINIRKNHPVFRRQRFLAGGP FGSEVKDRDIAWLVPSGKLMTPQDWDFEFGKALMVYLNGNAITETTARGERITDDSFIMI FNAHHEDIEFTLPKKDLGASWRLIVDTSDSGGYPDEEKLIAAEGSIVVQPRTTLILRQTE PPVFDDSDDSAQSAAPAEASDS >gi|227860833|gb|ACLH01000087.1| GENE 24 23104 - 24489 1377 461 aa, chain + ## HITS:1 COG:Cgl2064 KEGG:ns NR:ns ## COG: Cgl2064 COG0847 # Protein_GI_number: 19553314 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Corynebacterium glutamicum # 5 461 4 467 467 350 46.0 4e-96 MSYTAHGAVIDVTADALTVHRSQLAASLGAPARESLSLADATGVECAEPTATGFGQVIVR GTSDSAGIAGDTIIRFAPGQDATAFARAVEATLRGEAPAASSGVQGLDFTAVDVETANDN WGSVCQIGAVRFRDGEETESRTWLCTPPPGLEHFDKVNISIHGITAEDVADASPFADAAA ELFEFLGTDTLVAHNAQFDSTALRSGLKKADAPVPEVRLACSLALARDASRAGVIDVANH KLPTVASFLGAEDFRHHEATADARAAGEIVSALAQRFGHSGSIEDLFTTRDFALGTLSEE SVIPVLRANTAPLSAADLGAGTDFRDKTRMAGTASGSKKKGSAAKERRGPAPWQSVSTPD TIPDPNPDADPEGALFGQNVTLTGDFEPFDKGLLWSKIAERGGQVGKNVTKKTTILVVGQ WATKTSKEKRAEELQGKGQDIAIWQTDKLLEELQLDEAPPF >gi|227860833|gb|ACLH01000087.1| GENE 25 24641 - 25249 494 202 aa, chain + ## HITS:1 COG:no KEGG:cauri_1633 NR:ns ## KEGG: cauri_1633 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 202 1 202 202 380 100.0 1e-104 MTIALPTSLRIDHLLPSLCPSEELNGIKLCDDGFGDSPASLQLSRTLSMSLVHGTGVEAK RVSQRAVDDMGLTVRQAWDTAALNLQRRALTQQGLRFFTRPAELGLSRKESGLEVRVHRC AVSSWLAHPQAFVILDNHLQRLSQALSITYLVPDAHTLYALFNVSPQRATELAYRAAELR PRHRPPLSLQPLVLANGFPLEV >gi|227860833|gb|ACLH01000087.1| GENE 26 25302 - 26306 879 334 aa, chain + ## HITS:1 COG:Cgl2067 KEGG:ns NR:ns ## COG: Cgl2067 COG2357 # Protein_GI_number: 19553317 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 328 1 331 341 369 57.0 1e-102 MAESSMSRLSNQYHSWVHAHPTAAQDFRDAIEDLLNDAGIIFDRVATRVKLWPSLKAKAK KRRDNGELMYPKPWEDIHDVLGVRITVFHSTVIPEALEVLGETFTVLRSVDKAAETRISG GFGYGSHHLVLKVSEDSAAALEELEAYVGWTFEIQIRTVLQHAWAEFEHDIRYKQGPNPP SPQVDRLFTLAAGLIELADQQFDEIAALKAPSSEAGDDVEITAETLPGVLAIILGNRFPR SRSEHYRFLAELLENNGITRLSQLKQLLDDDAIAHVHDAMRYRFRPGQVRLIDDLLLNKF GPQHIEATAEAGDRKDRKRRLNARLKALKNFRNT >gi|227860833|gb|ACLH01000087.1| GENE 27 26303 - 26689 405 128 aa, chain - ## HITS:1 COG:Cgl2072 KEGG:ns NR:ns ## COG: Cgl2072 COG1188 # Protein_GI_number: 19553322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Corynebacterium glutamicum # 6 125 5 124 126 173 76.0 7e-44 MVNQPDGRPVRIDAWVWSVRMFKTRSEAATAVRAGHVKLNGNATKPAQQVVPGDRVRVWR NHHEHDLEVLATVSKRVGAPIARTCYIDHAPPPPPKEFMPSVPVRPRGAGRPTKKERRQM EKFRGGFR >gi|227860833|gb|ACLH01000087.1| GENE 28 26696 - 26932 328 78 aa, chain - ## HITS:1 COG:no KEGG:cauri_1636 NR:ns ## KEGG: cauri_1636 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 78 4 81 81 119 100.0 4e-26 MTMQRRPNNPIEQRKQAVRTHARNGATCVVGGVAGGVLLGWALTGFWTWMAIGLIVAVVG GVYNWVKIQKIVNENHNL >gi|227860833|gb|ACLH01000087.1| GENE 29 26967 - 27605 708 212 aa, chain - ## HITS:1 COG:Cgl2074 KEGG:ns NR:ns ## COG: Cgl2074 COG1739 # Protein_GI_number: 19553324 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 2 211 4 213 217 240 55.0 2e-63 MLESYQRPVAGDVVEHEIEIKRSRFITLIGRATTEAEARALIDAARDRFPDARHHCSAYI YHVDGSNPVERSSDDGEPSGTAGKPMLDVLKGSGLLDICAVVVRYFGGIKLGAGGLVHAY GGAVSETMEQVEHITRALRELYTVEVSHAEAGRLEAELRNRGVDMVDTAYGQAVTFTVSV EPGGEEELAATLAALTQGGVEPKEAGTAWVEL >gi|227860833|gb|ACLH01000087.1| GENE 30 27605 - 28888 1369 427 aa, chain - ## HITS:1 COG:Cgl2076 KEGG:ns NR:ns ## COG: Cgl2076 COG1171 # Protein_GI_number: 19553326 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Corynebacterium glutamicum # 9 425 6 422 423 604 73.0 1e-172 MTSTPQDFEPIHASDIQLAQSRISSEIAPTPLQYCPRLSQETGYEVYLKREDLQDVRSYK IRGAIYGMSNLSEEQRTHGIVTASAGNHAQGVAYACRTMGIHGKIYVPEPTPKQKRDRIL VHGGDLVELVVTGANFDEAAAAAHADAAERGAFFIEPFDSRDTVTGQGTVAAEIVSQLSS IGKSLDTVVVPVGGGGLISGITSYLADMAPRTAVVGIEPAGAASLSAAFAAGEPVTLETV DPFVDGAAVKRIGELPFQILEANQGRLHHDTVSEGAVCTEQLALYQNEGIIAEPAGALSV TGLRTLNLQPGSTVVCVISGGNNDVLRYAEIMERSLVHRGLKHYFLVNFPQEPGQLRHFL QDVLGPEDDITLFEYLKRNNRETGAALVGIELGNAAGIDGLLERMEKSKLNCQQLKPGTP EYDFLVA >gi|227860833|gb|ACLH01000087.1| GENE 31 29067 - 30989 2334 640 aa, chain + ## HITS:1 COG:no KEGG:cauri_1639 NR:ns ## KEGG: cauri_1639 # Name: not_defined # Def: alkaline phosphatase (EC:3.1.3.1) # Organism: C.aurimucosum # Pathway: not_defined # 1 640 1 640 640 1087 100.0 0 MSRSFSRRSLALCVATATSLSVAVPASSAAIVNNVIEHSAADASLKLTPVGTYESEVYAE SAAEIVAFHPASKRILTVNAHAGQIDILDASDPAKPTLIGSISAGKGKEINSVAVRPDGL AVAAVQQADKTEDGDALFFNAAAADLDTAELGRVMVGALPDNVHLTADGGYALVANEGEP SNELNAEGTDYVTDPEGSVSVIKLPEAVEAPTQADARIAGFTAFDGQPLPEGVRVFGPSG HDSKPSIDFEPEYITSQDGKAFVTLQEANAIGVIDIESATVEKILPAHIADHSQVPLDPS NKDDAAELRTIPVKGLSMPDSIGAFTAGGQTYFATANEGDAREWGIKEKDGGSGVYTDEV ELKDLVEEGKVCEGALGDVDLDKLADKKEAGNLKLSNASGWNEEKGCFDELYAYGSRSFS IYDSEGNIVFDSGAEFEKITAELNEPGIFHHNADNEEATFDDRSDNKGPEPEALTIGTVG ERTYAFIGAERVGGIFVYDVTDPTNASFVTYVNNRDFSTDEFAAAGDLGPEGFAFVDKAD SPNGEHLLIVGNEVSGTTTAYNVEDLLNADEDNEDDADDHGENKSSQSSHSSTATIAVGS IIGVIAAVAAAVGLLNTPGVRETVLSFAPAPLREQLGKFL >gi|227860833|gb|ACLH01000087.1| GENE 32 31094 - 31487 206 131 aa, chain + ## HITS:1 COG:no KEGG:cauri_1640 NR:ns ## KEGG: cauri_1640 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 131 1 131 140 216 100.0 3e-55 MRLSASLIAVCATTMALATPLAAANDSIGSPNGSSLSVGHLDVSNSSQAKEGTTPEKGTS PETDPEKQKEAAADAAWEKMPEWLQSARPSDTTKEVFAWLTTIFGLVAAGVNALVLVAKA NPSILDGPRDF Prediction of potential genes in microbial genomes Time: Sun Jul 3 04:59:26 2011 Seq name: gi|227860832|gb|ACLH01000088.1| Corynebacterium aurimucosum ATCC 700975 contig00169, whole genome shotgun sequence Length of sequence - 73126 bp Number of predicted genes - 67, with homology - 65 Number of transcription units - 34, operones - 11 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 884 1258 ## COG0620 Methionine synthase II (cobalamin-independent) 2 2 Tu 1 . - CDS 997 - 4626 4462 ## COG0587 DNA polymerase III, alpha subunit + Prom 4546 - 4605 2.1 3 3 Tu 1 . + CDS 4635 - 5531 1152 ## COG2962 Predicted permeases 4 4 Op 1 . - CDS 5535 - 5804 370 ## cauri_1646 hypothetical protein 5 4 Op 2 . - CDS 5838 - 6437 635 ## cauri_1647 putative secreted protein 6 4 Op 3 15/0.000 - CDS 6434 - 7312 906 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 7 4 Op 4 . - CDS 7357 - 7836 576 ## COG0597 Lipoprotein signal peptidase - Prom 7864 - 7923 2.0 8 5 Tu 1 . + CDS 7905 - 8852 1006 ## cauri_1650 putative secreted protein 9 6 Tu 1 . - CDS 8981 - 9613 746 ## cauri_1651 putative secreted protein 10 7 Tu 1 . + CDS 9720 - 10655 1050 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 11 8 Tu 1 . - CDS 10652 - 12097 966 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 12 9 Op 1 3/0.100 + CDS 12233 - 12889 658 ## COG1802 Transcriptional regulators 13 9 Op 2 . + CDS 12886 - 14256 1375 ## COG0477 Permeases of the major facilitator superfamily + Term 14326 - 14367 4.7 - Term 14314 - 14355 7.7 14 10 Tu 1 . - CDS 14380 - 17577 4533 ## COG0060 Isoleucyl-tRNA synthetase - Prom 17779 - 17838 5.2 + Prom 17658 - 17717 2.9 15 11 Tu 1 . + CDS 17941 - 19017 805 ## cauri_1657 hypothetical protein + Term 19186 - 19217 -0.9 - Term 19038 - 19083 6.3 16 12 Tu 1 . - CDS 19182 - 19352 297 ## cauri_1658 hypothetical protein - Term 19423 - 19469 13.3 17 13 Op 1 5/0.000 - CDS 19475 - 20575 1744 ## COG3599 Cell division initiation protein - Prom 20647 - 20706 2.5 18 13 Op 2 12/0.000 - CDS 20744 - 21055 219 ## COG0762 Predicted integral membrane protein - Term 21198 - 21268 18.1 19 14 Op 1 14/0.000 - CDS 21286 - 21708 528 ## COG1799 Uncharacterized protein conserved in bacteria 20 14 Op 2 7/0.000 - CDS 21778 - 22488 580 ## COG0325 Predicted enzyme with a TIM-barrel fold 21 14 Op 3 5/0.000 - CDS 22488 - 23228 604 ## COG1496 Uncharacterized conserved protein 22 14 Op 4 6/0.000 - CDS 23253 - 24617 1618 ## COG0206 Cell division GTPase - Prom 24722 - 24781 2.0 23 14 Op 5 5/0.000 - CDS 24824 - 25483 578 ## COG1589 Cell division septal protein 24 14 Op 6 26/0.000 - CDS 25476 - 26966 1648 ## COG0773 UDP-N-acetylmuramate-alanine ligase 25 14 Op 7 31/0.000 - CDS 27005 - 28090 937 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 26 14 Op 8 25/0.000 - CDS 28120 - 29601 1100 ## COG0772 Bacterial cell division membrane protein 27 14 Op 9 28/0.000 - CDS 29616 - 31007 1200 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 28 14 Op 10 28/0.000 - CDS 31004 - 32116 1302 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 29 14 Op 11 26/0.000 - CDS 32140 - 33675 1393 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 30 14 Op 12 26/0.000 - CDS 33672 - 35225 1304 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 31 14 Op 13 . - CDS 35293 - 37161 1824 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 32 15 Op 1 . - CDS 37490 - 38263 786 ## cauri_1674 hypothetical protein 33 15 Op 2 29/0.000 - CDS 38323 - 39366 748 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 34 15 Op 3 . - CDS 39541 - 39975 397 ## COG2001 Uncharacterized protein conserved in bacteria + Prom 40388 - 40447 3.3 35 16 Op 1 36/0.000 + CDS 40498 - 41646 1244 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 36 16 Op 2 . + CDS 41643 - 42332 254 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 37 16 Op 3 . + CDS 42368 - 42952 300 ## cauri_1679 transcriptional regulator, TetR family - Term 42987 - 43030 12.1 38 17 Tu 1 . - CDS 43082 - 43489 349 ## cauri_1680 hypothetical protein - Prom 43554 - 43613 1.9 39 18 Tu 1 . + CDS 43536 - 43712 138 ## 40 19 Tu 1 . - CDS 43644 - 44087 340 ## cauri_1681 hypothetical protein - Prom 44206 - 44265 5.0 + Prom 44094 - 44153 2.4 41 20 Op 1 . + CDS 44351 - 44923 508 ## COG0456 Acetyltransferases 42 20 Op 2 . + CDS 44967 - 46058 941 ## COG0142 Geranylgeranyl pyrophosphate synthase 43 20 Op 3 . + CDS 46060 - 47598 1278 ## cauri_1684 alpha mannopyranosyltransferase 44 21 Tu 1 . - CDS 47567 - 47965 316 ## cauri_1685 hypothetical protein 45 22 Tu 1 . + CDS 48016 - 49272 789 ## COG0515 Serine/threonine protein kinase 46 23 Tu 1 . - CDS 49285 - 50643 1756 ## COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 50682 - 50741 1.9 47 24 Tu 1 . - CDS 50747 - 51253 288 ## cauri_1688 hypothetical protein + Prom 51254 - 51313 3.3 48 25 Tu 1 . + CDS 51371 - 52576 440 ## cauri_1689 hypothetical protein 49 26 Op 1 . - CDS 52402 - 53595 877 ## COG4763 Predicted membrane protein 50 26 Op 2 . - CDS 53599 - 54345 889 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 51 26 Op 3 4/0.100 - CDS 54412 - 55368 409 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 52 26 Op 4 1/0.400 - CDS 55361 - 56524 502 ## COG0438 Glycosyltransferase 53 26 Op 5 7/0.000 - CDS 56528 - 57604 470 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein - Prom 57638 - 57697 4.8 - Term 57677 - 57747 9.3 54 26 Op 6 . - CDS 57763 - 58443 312 ## PROTEIN SUPPORTED gi|145223395|ref|YP_001134073.1| NLP/P60 protein - Term 58871 - 58908 -0.8 55 27 Tu 1 . - CDS 58920 - 59408 -131 ## - Term 59471 - 59522 16.6 56 28 Op 1 28/0.000 - CDS 59553 - 61154 2117 ## COG1290 Cytochrome b subunit of the bc complex 57 28 Op 2 4/0.100 - CDS 61175 - 62395 1593 ## COG0723 Rieske Fe-S protein 58 28 Op 3 4/0.100 - CDS 62392 - 63276 1089 ## COG2010 Cytochrome c, mono- and diheme variants 59 28 Op 4 . - CDS 63347 - 63931 603 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 - Prom 63959 - 64018 3.3 - Term 64431 - 64470 10.1 60 29 Op 1 . - CDS 64516 - 64947 753 ## cauri_1700 hypothetical protein 61 29 Op 2 . - CDS 64967 - 66046 1810 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 - Prom 66189 - 66248 3.5 62 30 Tu 1 . + CDS 66401 - 68323 2375 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) - Term 68333 - 68374 13.4 63 31 Tu 1 . - CDS 68394 - 68738 502 ## COG0316 Uncharacterized conserved protein - Prom 68900 - 68959 1.6 + Prom 68690 - 68749 1.7 64 32 Op 1 . + CDS 68919 - 69611 819 ## cauri_1704 hypothetical protein 65 32 Op 2 . + CDS 69624 - 70541 798 ## COG2038 NaMN:DMB phosphoribosyltransferase 66 33 Tu 1 . - CDS 70551 - 71654 1507 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 67 34 Tu 1 . + CDS 71820 - 73125 1657 ## COG0260 Leucyl aminopeptidase Predicted protein(s) >gi|227860832|gb|ACLH01000088.1| GENE 1 2 - 884 1258 294 aa, chain - ## HITS:1 COG:Cgl2078 KEGG:ns NR:ns ## COG: Cgl2078 COG0620 # Protein_GI_number: 19553328 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Corynebacterium glutamicum # 3 294 4 297 401 428 69.0 1e-120 MVNKIRTTHVGSLPRTQELLDANLERSAGTISDEKFHEILERSVADVVKRQVDLGIDIIN EGEYGHITSGAVDYGAWWNYSFTRLGGLTMTDKDRWEIGEKIRSEPGKIRLSSMKDRRDR ALFAEAYNDPDSGIFTGRKKVANPEFTGPVTYIGQEQVEADVKLLADALPEGTEGFVAAL SPGAAARLPNKYYEDETDLVRACGEALKVEYKAITDAGLTVQFDAPDLAEAWDSVVPEPT VEDFQAFLRERIEILNESIKDIPREQTRLHICWGSWHGPHVTDIPFEDIIEEIL >gi|227860832|gb|ACLH01000088.1| GENE 2 997 - 4626 4462 1209 aa, chain - ## HITS:1 COG:Cgl2079 KEGG:ns NR:ns ## COG: Cgl2079 COG0587 # Protein_GI_number: 19553329 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Corynebacterium glutamicum # 20 1209 1 1188 1188 1956 80.0 0 MYLNEDLRAKFDGPAKMSRMAKNSSFVHLHNHTEFSMLDGMAKVDMLADEVLRQGMPAVG MTDHGNMYGSNAFYQRMTSAGVKPIIGIEAYLAPESRFNKKRVLWGTPDQKRDDVSASGA YLHQTMLAENETGLRNLFKLSSLASYEGQLGKWPRMDAELIAEHAEGIIATTGCPSGDVQ TRLRLGQFNEALEAAAMWQDIYGKDNFFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVT NDCHYVLESQAPSHEAMLCVQTGKTFMDPDRFKFDGTGYYIKSAAQMRELWDHMVPEACD NTLWIAERVQDYGAIWEEHTHDRMPIADVPEGYTPTSWLTHEVMEGLKDRFNGGDVPQEY IDRAEYEISVIDMKGYPSYFLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDP IEHGLLFERFLNPERPSAPDIDIDFDDRRRGEMITYAAERWGEDKVAQVITFGTVKTKQA IKDSAKVHFGQPGFQMADRINGALPPAIMAKDIPLAGIMDPEHERYSEATEVRQMIETDP DVKKIYETARGLEGVVRQAGVHACAVIMASVRLMDHIPMWKRPADGAYITGWDYPACEAI GLLKMDFLGLRNLTVIGDCLENIKKNRGEEVHLEDLHADDPNASKVYDLLSRGDTLGVFQ LDSGGMQELLKRMKPTGFKDIVASLALYRPGPMGVNAHWDYADRKNGRKEITPIHPELEE PLKEILDETYGLIVYQEQIMRISQKVANYTAGEADGFRKAMGKKKPEVLAQQYDKFWGGM KDNGYSKEAMDALWGTIEPFASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVG DKKDKSAIYLADCRHLGIRVLSPDVNESVETFQAVGEDIRFGMGAIRNVGGEVVDSIVKT RREKGAFTSFSDYLDKIELAACSKRVTESLIKAGAFDSLEHPRKGLMLIHEDAVDSVQTT KKAADKGQFDLFAGFGGDDQGDSVSAFAIDIPEENWDRKHELALEREMLGLYVSGHPLDG FEEALNAQTDTPITKILNGEVGNGQELVIGGIISGVDRRFSKRDGSPWAIVSIEDHNGAQ VDILVFNQVYSLVAPQIAEDNIILAKVQVKIRDERMSLFCSDIRVPDLGPGNGAGLPLRL TMRTDQCTMDNIARLKQVLVNNKGESDVYLTLVDGEESTMMVLGEHLRVERSSNLMGDLK ATMGAGILG >gi|227860832|gb|ACLH01000088.1| GENE 3 4635 - 5531 1152 298 aa, chain + ## HITS:1 COG:Cgl2080 KEGG:ns NR:ns ## COG: Cgl2080 COG2962 # Protein_GI_number: 19553330 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 1 275 1 275 280 278 58.0 1e-74 MFYTIAAYLMWGFFPAFFPLLRPASPFEILAHRIVWTAVLVTAVLLVTGGWRELKAFSLR TWGWMFACGVAITINWGTYVIAINSDHVADAALGYFINPLVSVALGIIFLKEKLTKAQVA SVSIAFIAVLWLTFMTGQAPYYSLALAFSFGIYGLLKKRITVSSMSSVAAETLVMLPFAL IYLGYLQAQGVSTFTTEGPGHVALLITSGLVTALPLLCFAQGAKHLRLSTLGMLQYMTPI MQMLWALFVTQEHMSTERWIGFAIIWVAVIIYLADLVRMGRASRRRARLHPADASPTA >gi|227860832|gb|ACLH01000088.1| GENE 4 5535 - 5804 370 89 aa, chain - ## HITS:1 COG:no KEGG:cauri_1646 NR:ns ## KEGG: cauri_1646 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 89 1 89 89 125 100.0 6e-28 MRLFPNTSEWPPNYRFAYLLMWAGAFIASGAAIAQGIWGADNLTFGILIVVAIYCIAMAI LMPRWALNAREEAARRAQARQAREELKRR >gi|227860832|gb|ACLH01000088.1| GENE 5 5838 - 6437 635 199 aa, chain - ## HITS:1 COG:no KEGG:cauri_1647 NR:ns ## KEGG: cauri_1647 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 199 1 199 199 293 100.0 2e-78 MSPQRSTRQRIYRRRQAAALVLLAVLALVVVLAFGLFGTQPRTALQGDQLGPDGAETAAE YRERAEASLAQAEEPAYALVGFHDPLSPQDVSDALQPVERMDAIVIGLAAPIAVPEPVAG ATRAEVIDSVLARVADHARGMREEAPAEVDAVVVYSGGSQLRALASDPRVDTVEVAPEDA AWGSFGVRPPANVGQNENR >gi|227860832|gb|ACLH01000088.1| GENE 6 6434 - 7312 906 292 aa, chain - ## HITS:1 COG:Cgl2087 KEGG:ns NR:ns ## COG: Cgl2087 COG0564 # Protein_GI_number: 19553337 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Corynebacterium glutamicum # 1 291 18 308 310 425 69.0 1e-119 MRVDAALAKLLGISRARVSQLCAAGDVEIDGAAVGKSERLNAGGWIDVMMPAPEEPLIPK EELVEGMDVLYADEDIICVCKPVGVAAHPTLGWDGPTVIGGLRAAGYALADAGPTERKGI VHRLDVGTSGVMVVAASERAYSQLKNAFRERTVQKTYHAVVQGLPDPIVGTIDAPIGRHP SAGWKFGVVDDGKPAVTHYKLLEAFREASLLEVHLETGRTHQIRVHMSATGHPCVGDPMY GCDPNLAKRVGLNRQWLHAVELGFTHPGTGKWFECTAPYPEDLKHAVEVLRG >gi|227860832|gb|ACLH01000088.1| GENE 7 7357 - 7836 576 159 aa, chain - ## HITS:1 COG:Cgl2088 KEGG:ns NR:ns ## COG: Cgl2088 COG0597 # Protein_GI_number: 19553338 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Corynebacterium glutamicum # 1 156 32 187 193 207 66.0 5e-54 MVAVVLGVAAVDQAVKALMLSILTEGEALPVIGDWFRFYLLFNPGAAFSMGGEGSTWLFT TIQLVFVVGVAIAAPRIHDKWQAIGLAMIAGGALGNLIDRLVREPGFWFGHVVDYISVGS FAVFNIADAAITCGVVVFIIAMFWSEMNEKSEEQETGGV >gi|227860832|gb|ACLH01000088.1| GENE 8 7905 - 8852 1006 315 aa, chain + ## HITS:1 COG:no KEGG:cauri_1650 NR:ns ## KEGG: cauri_1650 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 315 1 315 315 507 100.0 1e-142 MFRVKALAVLSATVLGVSGALAGCSYSQPAKPVEEPVGLALDAPRVTLLEPGDGASRVLA YQDLDASQELTYKVATGFDQQLRKDGSAAPSPAAEDKVTLPLQASVEAATENVEGQLPAS RNAFVTVGKPEADGTDVTSAEGFQFGWRGTDSGQMNSLRLAAPQAATDQARSTVERAITS LTSLPIVFPDEEIGPGARWMVESRVTGESTLLQTTTYTLDKLDEDIATLSVKVEQRPSLG ALSFDGADAPEELQGKELKVLDHTSTSEGSVTVDLTKPLPTAGDVSITTAISYGAEGSDL RVVQTSATDMEFTTD >gi|227860832|gb|ACLH01000088.1| GENE 9 8981 - 9613 746 210 aa, chain - ## HITS:1 COG:no KEGG:cauri_1651 NR:ns ## KEGG: cauri_1651 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 174 1 174 210 236 100.0 6e-61 MKSFKLSAAVLALGAATALSACSSSEDAASESSTAAKPSGETSASQVVSTEMPTVEQLNE ILAKAADPNLPQEEKVQLVQGSETAPELFDVMSQSQAESGATFEVVAPVIPGLVPDSALA TVHINTPDGQQQTADQVEFINEGGTWKLSKTWACVLVTNIVPPEEVPEMCADSVPEDAAA PADAPAEGEEAPAEEAPAEDAEAPAEAPAQ >gi|227860832|gb|ACLH01000088.1| GENE 10 9720 - 10655 1050 311 aa, chain + ## HITS:1 COG:Cgl2092 KEGG:ns NR:ns ## COG: Cgl2092 COG0252 # Protein_GI_number: 19553342 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Corynebacterium glutamicum # 4 292 23 318 325 196 49.0 4e-50 MTFALIATGGTIACTTVRDGSLVPTVSGQQLAASLGADDGTHDIEVVEFRALDSSSITLA DLDELLLCVREQLARPDIDGVLITHGTDSLEETALALSLFDLGDGPIVLTGAQRAFDHPA GDGPRNLRDAYELLRSGKPGVWVQFGGKTIPGRGARKWHTSQLNGFEELPVGDSAVPLLP LAPMAGNPVEIIAAYPGAGATLVDASLPHTRGLVIEAMGSGNMGAEMGAGVARALQADIP VVISTRTPYGNTKLAYGGAGGGATLGEMGAVAAGGFRAGQARIMLAAALATGTPVAEMFS RAPASTTYTAG >gi|227860832|gb|ACLH01000088.1| GENE 11 10652 - 12097 966 481 aa, chain - ## HITS:1 COG:Cgl2094 KEGG:ns NR:ns ## COG: Cgl2094 COG0389 # Protein_GI_number: 19553344 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 460 1 455 467 561 68.0 1e-160 MQRWVLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARAYGAHSAMPMF RAQQLVGYRAVVVQPRRAVYSAASRRVFGIIAQHAGVIEQLSIDEAFMEPAALLGATPAE VREWSENLRRVIRTETGLPSSIGAGAGKQSAKIASGEAKPDGTFVVPQERFKELIHPLPV GKLWGAGPVTQQKLAAIGVETIGQLAAMSRKEVEISLGGVVGVQLWELAQGIDERPVAPR AIAKQISTEFTYPTDLRTAAEVDAALIRAAHGAHSRLLKDGRGARTVTVKLRMADFHIES RSATLSYATDDLKVLEAKALSLARYPEELGPIRLVGVSYSGLEEARQDVLFPELDREIVR QAPDTDYETGVSDYLPGSTSAPVNVSSTADAEESSSCRWRATQDVYHPDFGHGWIQGAGH GVVSVRFETRATGPGFVRSFAAEEEELRPADPLNSLAWEDIPPDEDAEPEEAVEVPPRED N >gi|227860832|gb|ACLH01000088.1| GENE 12 12233 - 12889 658 218 aa, chain + ## HITS:1 COG:mll6782 KEGG:ns NR:ns ## COG: mll6782 COG1802 # Protein_GI_number: 13475658 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 11 214 12 211 224 81 29.0 1e-15 MHHVCMQKDKVPAAERAYEHLKRRIIDDEVDDSDMLSEAALAAELGMSRTPVREAFLRLE VEGFLKLYPKRGALVVPISPREIREVYEARLLVDENSARHICALSPEERELIADVLDATI DEQKAALDNSDLGTYTQLDAKFHQTIMDNGGNRLLAHLGHTLRERQQRFTATAIGRSVEK ARAFVAQHAVLADALRTGDIDSYLTELHSHLNSSRKQL >gi|227860832|gb|ACLH01000088.1| GENE 13 12886 - 14256 1375 456 aa, chain + ## HITS:1 COG:Cgl0322 KEGG:ns NR:ns ## COG: Cgl0322 COG0477 # Protein_GI_number: 19551572 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 54 448 20 408 410 249 38.0 6e-66 MTVSAHSNPLVEAPATQSDARTEADTAAESSEGAESSVSAGSPIHSPETPLSTRAWFPVA GSMIAVAWGGNEFTPLLVMYRETSNFSQVTVNGLLAAYVVGIIPALLIGGPLSDLLGRRP LLLPAAPLSLAGSFLLSIAPNEPLIIALGRVLCGMALGLVMAVGSTWITELITRAGGDPA AGARKASLCLTAGFLVGAGIASVLAQWGPWPTHTAYILHMLLTLLTAVWILHTPETRQPT RGDVKTTVLELRVRDMLEMLHIPAVAHKRFLRVVVPVAPWVFGCAGAAYALLPQLLSDSA GDAPIAFSGLMTVITLGCGVAVQMVGRLVDTHKSARASALAMFVITVGAILGAFAAHSLS LPLGIAAAATMGAGYGLALVAGLSEVQRIAGERELAGLTAVYYSISYTGFFIPMAFSALA PYIGFTALFSIGSFLALVCLINVILAWRAHLPGTRR >gi|227860832|gb|ACLH01000088.1| GENE 14 14380 - 17577 4533 1065 aa, chain - ## HITS:1 COG:Cgl2098 KEGG:ns NR:ns ## COG: Cgl2098 COG0060 # Protein_GI_number: 19553348 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 8 1064 5 1053 1054 1628 75.0 0 MSNNPANVGSVYPKVDMTAGSSRFPDMEQEVQKYWKADDTFKASLKQTEGCPEYVFYDGP PFANGLPHYGHLLTGYVKDIVPRYRTMAGNHVPRVFGWDTHGLPAELEAEKQLGITDKAQ IEEMGLEKFNEYCAKSVLEYTDEWEEYVNRQARWVDFENGYKTMDLNYMESVMWAFKELY DKGLIYQGFRVLPYSWAEHTSLSNQETRLDDSYKMRQDPTLTVTFPVSGAVEGSAAEKTL ADNAELANASFLAWTTTPWTLPSNLALAVHPEVDYVLFKATEGDFAGRTFIMAEALTDTL AKELGEAEVLKTFKGAQLEGFKYQPIFDFFPDVENAYQLLLADYVTTEDGTGVVHQAPAF GEDDMLTCQKYGVGLVIPVDEDGKFTSQVPPYEGQLVFDANKAIIKDLKEAGRVVRHVTI EHSYPHSWRSGEPLIYMALPAWFVKVTEFRDRMVELNHNEIEWLPEHIRDGQFGKWLEGA RDWNISRTRYWGAPIPAWISDDPEYPRVDVYGSLDELERDFGVRPTSLHRPHIDELTRPN PDDPTGKSTMRRVPDVLDCWFESGSMPFAQKHYPFENKEWFETHSPSDFIVEYSGQTRGW FYVMHALSTALFDRPAYKKVVAHGIVLGNDGLKMSKSKGNYPNVNEVFDRDGSDAMRWFL MSSPILRGGNLIVTEQGIREGVRQAILPIWNAYTFLQLYASQDAKFDVSSTNVLDRYILA KTHDLVKNTNDALANTDIATATEEVRLFADALTNWYVRRSRDRFWEGEETHAEAFNTLYT VLETVSRVVAPLLPHVAEVIYRGLTGERSVHLASYPKAEDYPADANLVAAMDATRAVASA ASSVRKSNKLRNRLPLPKLTVAMPDSARLADFKDIIRDEVNVKDVELTDDVDEVGTFEVV CNAKVAGPRLGKDVQRAIKNLKAGNYERDGEEVIVDGDIRLTADEYTERLKAANPESTAR VDGVDGLVVLDTNVTEELEAEGWAADIIRGLQDARKAEDFVVTDRITVVLSVPAEKEEWA NRHREHIAAEVLAVDFAVTTEAFEASAGQNVHDVLKGVTATVAKA >gi|227860832|gb|ACLH01000088.1| GENE 15 17941 - 19017 805 358 aa, chain + ## HITS:1 COG:no KEGG:cauri_1657 NR:ns ## KEGG: cauri_1657 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 358 1 358 358 687 100.0 0 MNALQAFLNALGAGIDVVAECEGMSEADLIAAGSPDKTAAQLARLHTSFFGKTAMTRMQR DAVKAARQRGHSLPTLEVIDRYARKAKTQALGWKLRLELCRTRADTLAMETLAKKKLKEH SAPPAPKEGVTVYRRRNAAWTMAITGPSQLIAELSDVVDREHPLESIREAFFKGAAPRRG LQTNILVPLEAMTKILDGDGEEITLQMTNGATMTGAEYLNKVIAGEIDKDGALATLFHPY HGPVNLYYEERSASIKQRIMAMAEFPVCAWDKCMKPADECQVHHLIAWKNGGYTNQENLV MLCPYHNGVNQDDPNAPPGRGRMARVGGKAIRTHGPPPPPTPLQAPPGLFTNTAERDD >gi|227860832|gb|ACLH01000088.1| GENE 16 19182 - 19352 297 56 aa, chain - ## HITS:1 COG:no KEGG:cauri_1658 NR:ns ## KEGG: cauri_1658 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 56 1 56 56 77 100.0 1e-13 MLIGALLLAFVAFLAFVNYILTAAEWSLYLLFASAGVGIVLFIADTVIKLRRKHDD >gi|227860832|gb|ACLH01000088.1| GENE 17 19475 - 20575 1744 366 aa, chain - ## HITS:1 COG:Cgl2100 KEGG:ns NR:ns ## COG: Cgl2100 COG3599 # Protein_GI_number: 19553350 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Corynebacterium glutamicum # 1 357 1 357 365 166 50.0 5e-41 MPLSPADVHNVAFSKPPIGKRGYNEDEVDQFLDLVEDALAQLQDENDDLHAQVEELKSQA PAAAAGGASAAKVDEAAVRKEVESKLRAEYEAKLADSKNEIAKAKEETKRAQEQAKAAQV QDNSAELKTAREEAAAAKRELEASKKELERTKKELESAKKNSAATTTASSAAAVAGAGAA QSNAQGLATPDTHMQAARVLGLAQEMADRLTSEAKADSESMLAEARTAAEKQLADADSHS KAQLADAQKRYDAQLQEADTRSKKLVADAENKAKQTESDATSRAEAQIRQAEEKAAALQA DAEKKHTEVMNTVKQQQTALEARISELRTFEREYRTRLKTLLQSQLEELESRGTAAPNGE AGKSNN >gi|227860832|gb|ACLH01000088.1| GENE 18 20744 - 21055 219 103 aa, chain - ## HITS:1 COG:Cgl2101 KEGG:ns NR:ns ## COG: Cgl2101 COG0762 # Protein_GI_number: 19553351 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Corynebacterium glutamicum # 1 91 1 91 95 87 56.0 6e-18 MNALGSILLVAVSLYSWILLARIVIEMIQSFSRQFNPPRWFMMVAEVLFVVTDPPVKALR KVIPPLQLGGIALDVSIIVLFLLLSILSQLIGWLFFGANGLAM >gi|227860832|gb|ACLH01000088.1| GENE 19 21286 - 21708 528 140 aa, chain - ## HITS:1 COG:Cgl2102 KEGG:ns NR:ns ## COG: Cgl2102 COG1799 # Protein_GI_number: 19553352 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 140 1 152 152 119 45.0 2e-27 MSLIDRTKEFFGLGPMDMDADDAYYADERAYSAPAYAPSYEKQEEEFVPTIVALSLVSFD DAAKVGGPFRDGDAVVFELTDADRGSAKRFVDFAAGLCFALEGRMKNLTKGVDTSRKVFA IVPKGADISTVELERAAHLR >gi|227860832|gb|ACLH01000088.1| GENE 20 21778 - 22488 580 236 aa, chain - ## HITS:1 COG:Cgl2103 KEGG:ns NR:ns ## COG: Cgl2103 COG0325 # Protein_GI_number: 19553353 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Corynebacterium glutamicum # 8 236 3 234 234 222 53.0 4e-58 MPNNDTARREELRAGLERTRADIQRFAEAARRPAPQLLPVTKFHPAEDIALLAELGITDV AENREQEARAKAEALPEMRFHMIGQVQTKKANHVARWAHSVHSLDSEKLARGLDRGVALA QERGQRQDSLPVYIQVSADGDTARGGCPLEDVPALVEVVDDLENLQLCGFMVVPPLESEP AEVFAQVRALTDEAAAKLGRDLKMSAGMSADMEAAIASGTDIVRVGTGIMGERPLG >gi|227860832|gb|ACLH01000088.1| GENE 21 22488 - 23228 604 246 aa, chain - ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 12 244 9 242 246 287 65.0 1e-77 MPVNEEAHAARRPVRMVFTTRAGGASSSPYESFNLGDHVGDDPAAVAANRERLLRATGLE DIVWMEQLHTNTVTVVGAERRGAKKPVPATDAVVTTEKRLGLGVLVADCTPVLLVDVSAG VIGAAHAGRLGARNGIVRNTVNAMIELGAIPSSIQVLMGPAASGRNYEVPEQMAEDVEKH LPGSQTRTSSGTWGVDVRAGLIHQLMGMGITAIESDPRCTIEDTDFFSYRREGVTGRQAG VIWLED >gi|227860832|gb|ACLH01000088.1| GENE 22 23253 - 24617 1618 454 aa, chain - ## HITS:1 COG:Cgl2105 KEGG:ns NR:ns ## COG: Cgl2105 COG0206 # Protein_GI_number: 19553355 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Corynebacterium glutamicum # 1 411 1 390 442 436 68.0 1e-122 MISSSNNLADIKVVGVGGGGVNAVNRMIEEGLKGVQFVAINTDSQALIFSDADTKLDIGR EATRGLGAGANPEVGKTSAEDHKTEIEDALQGSDMVFVTAGEGGGTGTGAAPVVASIAKK MGALTVGVVTRPFKFEGARRTRQAMAGIEELREVCDTLIVIPNDRLMQLGGEELSIVEAF RAADEVLHNGVQGITNLITIPGMINVDFADVRSVMSDAGSALMGIGFARGDNRALNAAEQ AINSPLLESTMEGAKGVLLSIAGGSDLGLHEVNAAASMVEERADEDANIIFGTIIDDNLG DEVRVTIIATGFDAQANMTSQPAQPGQTQQQSSEATPAARPGSLFENRAEAQPESPAAPR TEAPREEYTRAEPQRADSQRIGREEYTPRHSYEREQPAEPAPSSGLFTTSDRFRGEEYRR GADEEYRLSRPAERNSRDFDDDGDDDLDVPSFMR >gi|227860832|gb|ACLH01000088.1| GENE 23 24824 - 25483 578 219 aa, chain - ## HITS:1 COG:Cgl2106 KEGG:ns NR:ns ## COG: Cgl2106 COG1589 # Protein_GI_number: 19553356 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Corynebacterium glutamicum # 1 219 1 222 222 142 37.0 4e-34 MSKKTGALAVGVVLLVAVIAAAAVWLFPILTVKSFEVVGNDHVAAEDVEQASGVAKGSNL ARLDAREAARGVASIPWVESATVSRAFPSTVHIEVTEHEAVAFVRNGGTTVLVDNHGKEF VEDEAPPEAVELTGSTDSGSPEMQAAVEAVAALPAPIREKVTTLEIKDRYSLTFHTEDEK TIFWGASEDNKNKAIAFEDVLKLEGESWNISNPSLVTRR >gi|227860832|gb|ACLH01000088.1| GENE 24 25476 - 26966 1648 496 aa, chain - ## HITS:1 COG:Cgl2107 KEGG:ns NR:ns ## COG: Cgl2107 COG0773 # Protein_GI_number: 19553357 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Corynebacterium glutamicum # 3 485 7 486 486 546 62.0 1e-155 MTDTPATTDLSRVHFVGIGGSGMSGLARILVSRGAVVTGSDVKKSTAVDVLRTMGAHIAI GHAAENLDLAGDKPTVVVTSFAAIPQDNPELTAAREAGIPVIRRSDLLAELMEGHRQVLL AGTHGKTSTTSMAVSALQQAGLDPSFAIGGQLNRAGTNAHGGTGDAFVAEADESDASLLR YSPYVAVITNIEPDHLDYFGTAESYYQVFDDFADRVVEGGYLVVCLEDAQAATTGERAAQ RGIQVLGYGAGSAVDEDSAVPLAAEILEETVSAAGAHIRVRLALPGQAPQELSYDLHVPG HHMVLNSAAALLAGALAGGDPAELAAGLTDFTGVRRRFEYRGSERGIRVFDDYAHHPTEV SAVLNAARAKADAEGEGARVIACFQPHLYSRTMKFDAEFAQALALADAAVVLDIYGAREQ PVEGITSRIITDKMPEDMPVIFEPDFSEAAGDVISLAQSGDIVLTIGAGTVTYVAGEILS ELGRNNEAEEPKEPNV >gi|227860832|gb|ACLH01000088.1| GENE 25 27005 - 28090 937 361 aa, chain - ## HITS:1 COG:Cgl2108 KEGG:ns NR:ns ## COG: Cgl2108 COG0707 # Protein_GI_number: 19553358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Corynebacterium glutamicum # 5 359 7 362 363 370 60.0 1e-102 MNDTPISVVIAGGGTAGHIEPALAVGEELRQRHGARVTALGTPRGLESDIVPARGVDLRM ITPVPVPRKINVDAAKLPWRVLKSVRETRAVLKDVGANVVFGTGGYVAAPAYLAAKSLGI PFFVLETNALAGMANKLGVRLGGTGINAQEGSGMPGEVLGIPVRPGMGEDPDGAKAAAAR QNWNLDAHRPTIVVTGGSQGAVSINTAVAGALDDLCRDFQVLHAYGKKNEAPAAREHYTA VPYIDDMAGALAVADLMVCRSGAMTVAEVSAAGLPALYVPLPHGNGEQALNSRALVESGA AVQVPDAELTSKRLVAEVRAILDHPEALSAMRAAADASTAGEVAAIIAERIAQRVAAENR G >gi|227860832|gb|ACLH01000088.1| GENE 26 28120 - 29601 1100 493 aa, chain - ## HITS:1 COG:Cgl2109 KEGG:ns NR:ns ## COG: Cgl2109 COG0772 # Protein_GI_number: 19553359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Corynebacterium glutamicum # 1 476 1 474 550 413 49.0 1e-115 MTATSTQKPQRTLGYHLRDLRERLRAYPGLDYLVLRIAIFSLIGIGVLMAFSSSMATSLS ETDSPWSAALRQCVLVIAGLIVFWIGLRMSPRTLRALVPWFLGLSILLLILVLVPGIGTG RAEVGSQSWIMLPGGVAFQPSEFARVAVGMYGASALADKTHRSMRLTDPFMMYSIIAGIM FVLIVAQGDLGMGVSFALIVVFTLVFAGVDWRVPTVVGVFGAIGMVTVFLAGGFRSHRFH TYFDALRGNIEDTQGTGFQAYQGFLSLADGGFWGVGLGQSRAKWFYLPEAKNDFVFAIIG EELGLWGGALVIGLFAVLGYFGLRAATRAQDQFQSLLAATLAVGVVVQAFINIGYVIGVL PVTGIQLPMISAGGTAAVITIGSMGLLCNVARHEPLQVSAMQNFGRPLFDRLFFIPEPTP PNERRGGAHRAPREGKEATRSQRAHRDRPQRHVERSREERFGRAVTGRSARSQAPQGEPR REYRREYRRGERR >gi|227860832|gb|ACLH01000088.1| GENE 27 29616 - 31007 1200 463 aa, chain - ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 4 455 8 457 472 365 52.0 1e-101 MTRPDFLSGHVLIAGAGVSGRGCAAVLSSLGVDLTVADGNEDSRSRIAAELGVATVDTSA VDLAGYSLVVTSPGWRPDSPLLAAAASRGLEVIGDVELAYRLDQAEVFGAPRRWLAITGT NGKTTTTGMLAAIMAADEQRSGQRAQAVGNIGVSSFDALAAEPRVDILVAELSSFQLHWS SHLRPEVGALLNLADDHLDWHGSFEAYAADKAKILRGQHAVYGKEDEHVRVLAASLPGAT AFSHAEPAAGEVGVSTGSLLVNEVAGMKSAVVDDVTTIQPAGLAGVLDAAAASAVAALAG AQPESIAEGLSAYVVAGHRGEIVHRHAGVTYIDNSKATNPHAAEVAMRGLDSVVWVAGGQ LKGADVSELLRTHAARLKTAVLVGVDKHVLAQALVKAAPHVPVVIVDSHDPEAAMEQAVS AAVQHADAGDTVLLAPAAASLDMYTGMGQRGDIFAAAARRLAR >gi|227860832|gb|ACLH01000088.1| GENE 28 31004 - 32116 1302 370 aa, chain - ## HITS:1 COG:Cgl2111 KEGG:ns NR:ns ## COG: Cgl2111 COG0472 # Protein_GI_number: 19553361 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Corynebacterium glutamicum # 1 361 1 361 366 464 72.0 1e-130 MTQIIIAGAVSFLVAIFTTPVLIRYFSDTGRGQEIREDGPKSHLRKRGTPTMGGLAILAG ILVAYVVAGLYGLLTGHEAFTASGLLVLGLTLGLGAVGFADDFIKLFRHRNLGLNKTAKL ISQLVLALLFGFLVLRFPNDAGLTPGSTKLSFIRDLKTFDLAVGGTVIGTIVFLIFMYIL IAAWSNAVNLTDGLDGLAAGVTAIVMGSYSLMTFWQFRYSCATNFAAGCYQVRDPLDLAV LAAAGLGGCLGFLWWNAAPAKIFMGDTGSLALGGLVAGISVTSRTELLMIIIGALFVIET VSVVIQIVVFHSTGKRFFRMAPIHHHFENGGWAETAVVVRFWLLAAMAAMAGVAIFYGDW LTASGIGVGA >gi|227860832|gb|ACLH01000088.1| GENE 29 32140 - 33675 1393 511 aa, chain - ## HITS:1 COG:Cgl2112 KEGG:ns NR:ns ## COG: Cgl2112 COG0770 # Protein_GI_number: 19553362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Corynebacterium glutamicum # 1 509 1 490 514 512 62.0 1e-145 MIALSLAEIAEITGGRLDSVDEPDTQVTGFVEFDSRKVTSGSLFVALPGARVDGHDYATT AIDKGAVAVLAARPVGVPAIVVEPHGRVEGDGANADIYANDEDGSAAAVVAALSAIARAV TQRLAAEQNLTIVGVTGSAGKTSTKDLIATIFREVGETVAPPGSFNNEIGLPYTALRCDE HTRYLVAEMSARGIGHIRHLTEITAPRVGVVLNVGTAHLGEFGSRENIAQAKGELVEALP NAEAGGVAVLNADDPFVAAMAPRTEAKVVYYSTENRRGGAPAAQYYATDIVLDDVARPSF TLHSPDAEPVAVKLQVFGSHQVSNALAAAAAAIELGVSADTVAAALSGHRLASEHRMDVR TRRDGVTIIDDSYNANPDSMRAAIAALAYTAAARPDARSIAVLGEMGELGSDAEQSHRQL GEFLAKYHVEHLIAVGENPNCRAMAEAAAQQGINTVVCADAAAAAQAVDGILRVAPAGVD DWASRSVKDVVLIKASNAQRLWLVAEQLNHS >gi|227860832|gb|ACLH01000088.1| GENE 30 33672 - 35225 1304 517 aa, chain - ## HITS:1 COG:Cgl2113 KEGG:ns NR:ns ## COG: Cgl2113 COG0769 # Protein_GI_number: 19553363 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Corynebacterium glutamicum # 4 512 2 520 521 491 57.0 1e-138 MTTSTTLKRLAEISGGTVIGDASTSVSSCGLNSAALPPGGLFAALPGTRVHGARFAADTE AAAILTDAEGKRILNDAGEKRPLLVVEDIRAILGAVSAEIYSHPTQKLTILGVTGTSGKT TTSYLLEAGLLHAGYSVGLIGTTGTRINREPVPTSLTTPEAPTLQELFARMVSEGVTHVV MEVSSHALSLGRVQGTRFDVGGFTNLSQDHLDFHPTMEDYFEAKALLFDGPQAADRSVIC VDDEWGRRMAQRAAARPVIRVSTTPQGSDADITGRQLSTEVTGAQQVELTLASGEHAGTF EFRLPMPGTFNIANAALATGMAASIGIEPQVFLEGVEKVAVPGRMERVDRGQDFVAVVDY AHKPAAIAAVLETLRTQLEGSAGRIGIVVGAGGDRDSSKRPLMGAAAAKGADLVVVTDDN PRTEDPASIRAAVLAGAQEANPAADIREVGSRAKAIDEVVAWAQPGDAVIVVGKGHEVGQ LIGDTVHHFDDREEMARALEAVTTATTLSTEESKEQA >gi|227860832|gb|ACLH01000088.1| GENE 31 35293 - 37161 1824 622 aa, chain - ## HITS:1 COG:Cgl2114 KEGG:ns NR:ns ## COG: Cgl2114 COG0768 # Protein_GI_number: 19553364 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Corynebacterium glutamicum # 2 622 15 651 651 735 61.0 0 MRERVHVIAAVLLVIMLAWMGRLAWVQIVWGPDLAAKAAAQRTRVYVDTAGRGEILARDG QRLAYTMRARSLTVSPTRLRDELREQEDQKATGEAEYESLAPDAKNSYLDNKVTERLTEM SKGIPSKLKDAGIDAGDVEPEQIMDKLRADTQYEVLVRNVDPDVAVAISEEYHGLAADEQ QIRQYPNGSIAENVIGKVSMDGQGQFGFEASGDTTLTGIDGSSTEDVSANGQVIPGSLRD QVPTTDGKNVTLTLDLDLQTYVQQKLEKAKANSKAKSAEAVVLDAATGQVLAMANTGTVD PNKDIEKQLQKDKTFDNLAVSHPFEPGSVAKIITAAATIEEGLTDPDEVLQVPGSIDMAG VTVNDAWPHDVEPYTTTGVFGKSSNVGTLMLADRLGQDKYADYLKKFGLGQTSGIELPNE SPGLVPDRSQWSGGTFANLPIGQGQSWTALQLASVYQALANDGERIEPRIIDSITAPDGT KEELEEPETTRVVSAETARTVVDMFRAVFQDDPQGLNNGTAGNANIEGYQLSGKTGTAQK VDEDTGSYSNSKYWITFAGIAPADDPRFVVAVMLDEPESGVNDDGSGGQSAAPVFSDIAS WLLDRDNIPPSPPAPQLTLRAE >gi|227860832|gb|ACLH01000088.1| GENE 32 37490 - 38263 786 257 aa, chain - ## HITS:1 COG:no KEGG:cauri_1674 NR:ns ## KEGG: cauri_1674 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 257 22 278 278 428 100.0 1e-118 MGASRDFTTGADATGQGTALLERGRRTTPLPSRTPHRGTVPTRRVGSGLRGSRLGSKQVV SNRGRRVAQPTRVNGLFARLSFIAIALLITGVAAAMWLSGLSTSQTFKIQELTAQESTLD NQLETLNRDLENVRSASDVARRAHEAKMGIPVQPGVVEVGPEGNIEHKREATPDMESVID VNGEPVRPGQASSDPNATANMSDNLNARPTLSERNRERGGAASNDAHSEDSPEGGQPGEE NVELPDIPAQAPYAARG >gi|227860832|gb|ACLH01000088.1| GENE 33 38323 - 39366 748 347 aa, chain - ## HITS:1 COG:Cgl2116 KEGG:ns NR:ns ## COG: Cgl2116 COG0275 # Protein_GI_number: 19553366 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Corynebacterium glutamicum # 8 334 3 329 337 456 71.0 1e-128 MEHDGTINYDVSENHGHVPVMRARMAQLLAPAIEAAGENAVIVDGTLGAGGHSEYFLTTF PSVRIIGVDRDSASLSSASRRLSPFADRFVGVNARFDEVGSAIAEGESEVFSIAREHGIA GALFDLGVSSMQLDQVDRGFAYKTDAPLDMRMDPRQGMTAADILNTYSHGDLARILKTYG DERFAGKIASAVLREREKEPFGNSARLVDLLYATIPAATRRTGGHPAKRTFQALRVEVNR ELEAIEQVIPVITDALSIGGRAVFMSYQSLEDRIVKHAFTKLSTSTTPAGLPMDLPGTAA HYSVVTRGAEKASQEEIAENPRAASVRVRALERLEGTPSFHEPGGRP >gi|227860832|gb|ACLH01000088.1| GENE 34 39541 - 39975 397 144 aa, chain - ## HITS:1 COG:Cgl2117 KEGG:ns NR:ns ## COG: Cgl2117 COG2001 # Protein_GI_number: 19553367 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 144 1 143 143 224 88.0 6e-59 MFLGTYTPKLDDKGRLTLPAKFREELAGGLMVTKGQDHSLAVYPREEFAARARKAAAVSR TNPDARAFIRNLAASADEQRPDGHGRITLSAGHREYANLTKECVVVGSVDFLEIWDAAAW AEYQAQTEDAYSAADADDVLAGLL >gi|227860832|gb|ACLH01000088.1| GENE 35 40498 - 41646 1244 382 aa, chain + ## HITS:1 COG:lin2726 KEGG:ns NR:ns ## COG: lin2726 COG0577 # Protein_GI_number: 16801787 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 379 1 359 362 143 28.0 6e-34 MYLAWREMLFARTRFLLMGVVLALMSMLVVIISGLTAGLVNDGVSGLKAMDSDVVAFADG TQKDSAFTRSVVDASAAESFAHLDGVDQAAPLGLTIANAHNQKGTAVDLTLLGVEPDSFL APAGLPAIDTTRVDGQPSNTKHDIIASSTLQDEGIEVGDTITLDRLDIPLNVIGFSDNQR TFGHVDVAYLPLDIWQEIHAGGRHGEAVNSDAYDEASVIVARTTVKPDTEALTEQSGLDV RTLKESFDSSPGYTAEMMTLSMITWFLYVIAALVTGAFFLVWTIQRAGNIATLRAMGATK GFLLRDSLGQAVVILVLSILAGALVAVGLGSLLEQTAMPYATEFSSVISGGLILFVTGLL GAFIAVVRVTRTNPLAALGENR >gi|227860832|gb|ACLH01000088.1| GENE 36 41643 - 42332 254 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 21 226 35 246 329 102 33 6e-21 MSPALELHDVTVSYTDGDSQVKALDSVNLSIDPGEFVAVVGPSGSGKSTLLAVAGALTTP DSGKVLVADEDIVPLGDAQLAKIRRNHIGFVFQSTGNLPSALTAEEQIELATKVIGKTGR YSSAELLDKVGMKHRAKHRPGSLSGGERQRVGIARALVGDPQVLLVDEPTAALDRARSQE IVALLAKECHDFNVAGVMVTHDYEVLEHCDKVYEMVDGRLTPAANSASE >gi|227860832|gb|ACLH01000088.1| GENE 37 42368 - 42952 300 194 aa, chain + ## HITS:1 COG:no KEGG:cauri_1679 NR:ns ## KEGG: cauri_1679 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: C.aurimucosum # Pathway: not_defined # 1 194 1 194 194 322 100.0 4e-87 MPKITETTVAEHRAVQHRAVLEAAERLIVHNHGAVPTLAEVAAEVGLARPSVYRYVSSQH DLLVQLLIQATQVWNEQLEAAMKVAPPEPTKRLRAYVDATLELFVHGTHGHLITAAQHFP QAFADEEVQRSHGGFASIVDAFCPDVSAVDISLLNAAILRASELAERSPEQLASATQTLY AMADAIVAPPSSAD >gi|227860832|gb|ACLH01000088.1| GENE 38 43082 - 43489 349 135 aa, chain - ## HITS:1 COG:no KEGG:cauri_1680 NR:ns ## KEGG: cauri_1680 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 135 1 135 135 237 100.0 9e-62 MALSEHEQQALREIEQSLLANDPDFGASVSGETSFGGSSGAITLRGVALIVVGLCMMVGG IALAQQSLWFVSLSVLGFLVMFGSGVWMLRGKSEDSLVAVGAQAPACGRGKQSKRDGSGV GNRLEDNFRRRFEER >gi|227860832|gb|ACLH01000088.1| GENE 39 43536 - 43712 138 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGYYLYNVKDSEIVPTKTVHNLAALPPSLPMTPAPALGRHCPEAQLGLSRIHITCGKR >gi|227860832|gb|ACLH01000088.1| GENE 40 43644 - 44087 340 147 aa, chain - ## HITS:1 COG:no KEGG:cauri_1681 NR:ns ## KEGG: cauri_1681 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 147 1 147 147 190 100.0 1e-47 MAQVISATAAARSRNREAMQRVQRDRFVSQALDLLADARSSAAEGSFADALEMAYRASLR AAGARVAASTVSRRRRLPTSAWEQVALIGPADAQWAEEFKEYSRVRSRVASGLDPVPEPD SVYQYLALAARYVDATESELGFGAMAA >gi|227860832|gb|ACLH01000088.1| GENE 41 44351 - 44923 508 190 aa, chain + ## HITS:1 COG:Cgl2122 KEGG:ns NR:ns ## COG: Cgl2122 COG0456 # Protein_GI_number: 19553372 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Corynebacterium glutamicum # 1 184 1 184 187 189 50.0 2e-48 MSYTLRRLSPQEFAIALPHLVDIYIAAMDYNPSVRAGSISRWRADLIRPGFSCVVATDEY GIAGFAYGFLGTPDTWWDKQLRRALATSSGPTPEQEEILHNYFELAEIHVLPAKQGHGLG RALPEALAWNLPARYILLSTPEVPNEANSAFGLYRKMGFGDFLRDLHYPADSRPFAILQS TVPLAPTDTT >gi|227860832|gb|ACLH01000088.1| GENE 42 44967 - 46058 941 363 aa, chain + ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 9 363 11 366 366 417 64.0 1e-116 MTTPQIPSLDEIPAAVREELALFLDRQRDAIASIGAPVTNAISYLESFVLDGGKRIRPLY AWAGFIGARGLEGTESPQAMLRAATSLEFIQACALIHDDIVDASDTRRGNPTVHRGVAAR HRELGFHGDADFFGQSLAILVGDMALVWAEDMLQDSGLSPEALARARAPWRAMRREVIGG QMLDICLEAEGSEDATLADSVNRFKTAAYTIERPLHLGAAIAGAPEKLVAAFRGYGQDIG VAFQLRDDLLGVFGDPAVTGKPAGDDLREGKRTVLLSLALQRADASDPAAAAELRRLIGQ TEDPSEIARMAQIIAASGAPDVVEQRINDLTRSGLDHLHNAQVSPEVTETLEELAHKSTA RRM >gi|227860832|gb|ACLH01000088.1| GENE 43 46060 - 47598 1278 512 aa, chain + ## HITS:1 COG:no KEGG:cauri_1684 NR:ns ## KEGG: cauri_1684 # Name: mptA # Def: alpha mannopyranosyltransferase # Organism: C.aurimucosum # Pathway: not_defined # 1 512 1 512 512 918 100.0 0 MARPTTTRVPLRIPHPLPLGIIAAVVLALASFSGGATRNRGGFLEALNIGFLAYGHGRNI GMVLYWVGLFGLVAAWVLAGRYFIAPQLKNPQPDGALADIRRMLLCWVAPLLCAAPLASR DVYSYLMQGAMVRDGFDPYVEGAAVNPGPFLLEVSHDWRNTTTPYGPLHLWMGNGVTQLV GENVAAGIIVYKAISVLGFAAIAWSIPRLARGIGGDPALALWLGVANPVMLLHLIGGMHN ESIMVGLVSLSLLAAVHHKFHASLLLVGVAVSLKATAIFAAPFIVWLMLHHWAPKGTKPI KRFGVFLLSGFLAVLEVALAVAAITWASGSSWGWLSQISGNSKVINPLAGPTLLADILVP LIQVFSPDTTYNGVLTVLRSAAMILMLLGLVLVWWWGRTGVRRAIAATAAAYQVAFVFNS VTLPWYYASVLTLMGTFRPPLPLIKLTTGVAIFIGVAFAGDGNHQLYNWFWDIAMVVVAW SATQWIFDGVPRTTAAPELDEGSKRPKPVRAE >gi|227860832|gb|ACLH01000088.1| GENE 44 47567 - 47965 316 132 aa, chain - ## HITS:1 COG:no KEGG:cauri_1685 NR:ns ## KEGG: cauri_1685 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 132 1 132 132 259 100.0 3e-68 MSVTKSEKNTENPHPELPQLLAGEKLLTLKEVAERLDLPITRVFDLLNARKFIVWRSAEG ERLVPEAFFNAKGVISKHVSGVITVLSDNGWGDNEILAHLFTEDDSLPGRPIDALHGHLA REVIRRAQASAF >gi|227860832|gb|ACLH01000088.1| GENE 45 48016 - 49272 789 418 aa, chain + ## HITS:1 COG:Cgl2127_1 KEGG:ns NR:ns ## COG: Cgl2127_1 COG0515 # Protein_GI_number: 19553377 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 1 409 1 418 418 410 58.0 1e-114 MTRLNVGDILEGRYRIDQPIARGGMSTVYRCVDMRLGRAVAAKVMDERYHDDPVFVTRFE REARAMAQLSHPNLVAVHDFSADGLPIYLIMELITGGTLRELLAERGPMPPHAAAGVMHS MLAGLTEVHHAGLVHRDIKPDNVLITDSHRVKVGDFGLVRSAKAEHDSSGQIVGTVSYLS PEQVTGAEITPASDVYSAGIVLFELLTGTVPFHGDTPLAHATARVHEDVVAPSSRIEGVP MLFDALVATATARQPAERFADAGEFLDALDDVSCELQLPKFTVPIPRNSAAARTAAVPTD FSGTDNTRVFEATSAIPAPQPPTRETRVEPEPRNDAFLPPAAPVEPPAPSPAVPEPSAPV PPAGAEEEPEERPLSNRSAIALIGFLVLVGLATLAVAVAAWWFGSGEYGTWPILWRPY >gi|227860832|gb|ACLH01000088.1| GENE 46 49285 - 50643 1756 452 aa, chain - ## HITS:1 COG:Cgl2130 KEGG:ns NR:ns ## COG: Cgl2130 COG3200 # Protein_GI_number: 19553380 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Corynebacterium glutamicum # 1 452 15 466 466 801 84.0 0 MLPDLPPLPEGINEKFQDVISREAKQQPGWDQLQADNVRKILESVPPIVVAPEVEDLKRK LADVALGKAFLLQGGDCAETFESNTEPHIRGNIKTLLQMAVVLTYGASTPVVKLGRIAGQ YAKPRSSDLDANGLYNYRGDIVNGVEANEESRRHDPARMIRAYANSSAAMNLVRALTHSG TADLYRLHEWNREFVANSPAGARYQALADEIENGLAFMNACGVSDETLRSAEIYCSHEAL LKDYERSMLRLGTDLNGETKLYDLSAHQLWIGERTRGLDDFHVAFASIIGNPVGIKLGPG VTPEQAVEYAEKLDPNREPGRLTMIARMGHDKVRSVLPLIIKAVEDSGHKVVWQSDPMHG NTFTASNGYKTRHFDKIVDEVQGFFEVHRELGTHPGGVHLEFTGEDVTECLGGAEDITDV DLPGRYESAVDPRLNTQQSLELSFLIAEMLRN >gi|227860832|gb|ACLH01000088.1| GENE 47 50747 - 51253 288 168 aa, chain - ## HITS:1 COG:no KEGG:cauri_1688 NR:ns ## KEGG: cauri_1688 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 168 1 168 168 346 100.0 2e-94 MRYFYDTEFIEDGSTIELVSIGIVGEDGSEYYAVSTDFDPAKANAWVRENVLDKLPSPAD PVWKSRETIREELLKFLGRHSTPIELWAWVGAYDHVVLAQLWGDMASLPKGMPRYTRELK QYWEFAGRPKLPPVPNGNHDALVDARHNLAKFRVCEQHLPLTRGNRVH >gi|227860832|gb|ACLH01000088.1| GENE 48 51371 - 52576 440 401 aa, chain + ## HITS:1 COG:no KEGG:cauri_1689 NR:ns ## KEGG: cauri_1689 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 401 1 401 401 703 100.0 0 MAWIIQPAALFSSGSIVPSYHIDLDVYREGGRALLHGENLYAQSYVLDNGFSLPFTYPPF AAALFAMVSWLPLWPLSILLTAASVAALWVCLYAVLSRSCTTHRPGWWSSWALCACLLTE PITETLSFGQVNLLLTAAVIVDCLILRPRNPWRGILTGAAIAIKLTPAVFLAVFFVRRDW HALATAVGAFVACGVVGYLASPASSAVYWTDTIRDSSRIGGLAYSSNQSLRGVLSRVIPE QTTALWIIGCLIIVATLWWVMERTSSEIELLLLASSAALLCSPVSWSHHFTWLCLAAVYL TARRRWFIAGLTWLVLVARGHWLVPHGEQLELTWSWWQQIPGNDYFLLVVFFVALSCWLK LTPAEKGSFFRRLAPIGGGVSVQPKTGTLPRAHRAKDATAQ >gi|227860832|gb|ACLH01000088.1| GENE 49 52402 - 53595 877 397 aa, chain - ## HITS:1 COG:Cgl2135 KEGG:ns NR:ns ## COG: Cgl2135 COG4763 # Protein_GI_number: 19553385 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 6 367 19 382 417 214 35.0 2e-55 MTSSPKQRLAWPDVAKGISILGVVLLHITLTVPESKDTWLAAFNVWLDPLRLPLFFLVSG FFAQKVFRFSFAELFTRRLWYFLVPYVVWVLVEQQTKRVEYHWVFGDPIFDVDQMAASLL VGHSMAWFLHALILFNIFLWCVRKLPGWAAMALSFTPILFIAWQAQYTSIAKAIMFLPVF VGAAYFRDAIAAFAAAIEAPFRGTWDHRSFWAYSGMTVAYAIGFFIRRAWDNYAGEVDVT WLLPGAEALVRDDVHILVRMVEQFFEVPVGIAVAVAVSYIPVLSTGLRFIGSHTLPIYLG HPIGLTVLYSYPMALHPREVTLAGQWPLENTWFWLSMCVLYCAVASLALWALGKVPVLGW TLTPPPIGASRRKKEPFSAGVSLSQQLNATKNTTSKK >gi|227860832|gb|ACLH01000088.1| GENE 50 53599 - 54345 889 248 aa, chain - ## HITS:1 COG:Cgl2136 KEGG:ns NR:ns ## COG: Cgl2136 COG0204 # Protein_GI_number: 19553386 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Corynebacterium glutamicum # 1 243 23 265 267 320 60.0 1e-87 MRNKWYWAFKHIFFGPALRVWNRPWSEGMDRIPESGSAILASSHQAVMDSFYFPLLCPRQ ITFLAKSEYFTTPGFVGRLQKWFFSSVGQVPIDRVNKEASDAMLASAERIIGRGDLFGIY PEGTRSPDGRIYKGRTGMARIALTTGEKVIPIAMINTRKANPIGSWIPRPVRVGMRVGEP IDPRVWAAERNLDPQDHATARAFTDYVMKQLSELTGEPYVDVYASDVKASLQAGHGYPEG AEPGSEAR >gi|227860832|gb|ACLH01000088.1| GENE 51 54412 - 55368 409 318 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 17 314 6 319 319 162 33 6e-39 MLEHTPFAEGGHAGLTIGFDIGGTNLRAAVIDPSGEIVDSLSVPTATDAQTLEDDIVRCV DTLAASHDIEAVGLALAGFLDPECEVVRFAPHLPWRDAPVREILSNRVDVPVRLEHDANS AAWGEWRFGAGRGAKDWVFFAVGTGIGATLFTDGTIYRGAFGTAPEFGHLVVSPGGRLCS CGKRGCLERYASGTALPDTCADLRGDYDTALPLNPSGEEITAAARQGDPLGLAVMENFGQ WLGRGLSMVADVLDPELIVIGGGVSQDADLYLDRARESMASQIVGAGHRPLARVATAKLG SAAGMIGVADLARQEHRG >gi|227860832|gb|ACLH01000088.1| GENE 52 55361 - 56524 502 387 aa, chain - ## HITS:1 COG:Cgl2138 KEGG:ns NR:ns ## COG: Cgl2138 COG0438 # Protein_GI_number: 19553388 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 3 375 6 379 381 429 60.0 1e-120 MARILLVTNDFPPTIGGIQSYLRDFLATLNPQDVVVFASTQDRAAAAEHDATLPYTVVRW PRSIMLPTPTTARRMQQLIREHDIETVWFGAAAPLALMAPSARAAGASRIVATTHGHEVG WSMLPVARQALRRIGQNADVITYISEYTRNRLEPAFGSRAQWVHLPSAVNLEDFTPATRE EKQAAREHFGLGPGPVIVCISRLVPRKGQDQLLRALPEVRARIPDAQLLIIGRGRYEATV RELARLYCPDAVVQEARDTAELRMALHAADVFAMPARTRGGGLDVEGLGIVYLEAQAAGL PVVAGDSGGAPETVTPETGIVVRGSSVPELEQALCTLLGDIPGAHRMGEAGRRHVEEHWT WEIMGARLREVLECDRGQAAVYPTSHA >gi|227860832|gb|ACLH01000088.1| GENE 53 56528 - 57604 470 358 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 51 358 15 348 348 185 34 5e-46 MSRRGLACAVAALALSTVPVVVLSPSAVSQEVSPEQQQESAPQAQDPEDLSGLIERMADV AQRVSAKGEEVKGLEDELAESEKNIEELDRKAEDAHRSSEDASAAVAAQQERIDALAQKR YRRNAASTSVSAALNANDVASAVERMGYLGALSKAAKREEDAMIAASAAADDAHQEALDA AEEARRKRDELQEQRDTVLKEKAELEEQQKELEATVDGLSPEAREAWVQHFGGSSDLDLA ALADGSGSAAVEAALTRIGAPYGWGATGPDTFDCSGLMVWSYQQMGKSIPRTSQAQLAGG TPVPMDQLEPGDIVGYYPGVTHVGMYIGDGQVVHASTYGVPVAVVPLNSMPVQGAVRY >gi|227860832|gb|ACLH01000088.1| GENE 54 57763 - 58443 312 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145223395|ref|YP_001134073.1| NLP/P60 protein [Mycobacterium gilvum PYR-GCK] # 9 226 114 348 348 124 35 1e-27 MAEKVGAQEDLEFKFVAKHRRQGNLNTRRIASTAAIAATAAVVTPAAANAAEVVVPNTDI RFDVAGLENVPNIQQLPNVDRYIPAFKANQGGGYAAAVETPAAAAPAPAPSQSVGEKVLA AARSAVGSPYVYGANGPSAFDCSGLTSWAYQQAGVSIPRTSQAQASAGTPVSLDALQPGD IIVYYSGASHVGIYTGNGTIIDALNSGTPVGERSLHYMPIHSAVRF >gi|227860832|gb|ACLH01000088.1| GENE 55 58920 - 59408 -131 162 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSSGCVSSLKLCSPRCKWGRGLFCSCASDADRACSIYRAMSLVHPLDGTLSLSCPLCGP LMRASRARRPLSLFLFLNLFCRRDRYPYLSPQRRLVEPRGKRRGLSLRQAASFRIHDSLR SWASLVVDFNRIARSRGWNRCLRFVSFGPQVWSWWWVKWGFC >gi|227860832|gb|ACLH01000088.1| GENE 56 59553 - 61154 2117 533 aa, chain - ## HITS:1 COG:Cgl2141 KEGG:ns NR:ns ## COG: Cgl2141 COG1290 # Protein_GI_number: 19553391 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of the bc complex # Organism: Corynebacterium glutamicum # 1 529 6 536 539 860 77.0 0 MGNNMDERYSAAGVLRTQLNKVFPTHWSFMLGEMALYSFIILVLTGIYLALFFDPSITKV IYDGGYTPLNGVEMSRAYATALDISFEVRGGLFVRQMHHWAALMFMMSMIAHMLRIFFTG AFRRPREANWIIGCALILLGMVEGFLGYSLPDDLLSGVGLRIMSAIILGLPIIGTWLHWA IFGGDFPSDLMLDRFYILHVLVIPGIILGLIAAHLIMVWFQKHTQFPGPGRAENNVVGVR IMPVFATKAIGMGMMVAGVLALISGLMTINAIWNLGPYNPSQVSAGSQPDIYMLWTDGVA RVMPAWELYIGNYTIPSAFWVALLCGLMVVLLFAYPFIEKKLTGDDAHHNLLQRPRDVPV RSAIGAAAIVFFLLVTLSGGNDHVAHFFQISLNAMTWVGRIGLIVLPPIAYFMTYRICVG LQRSDREVLEHGIETGVIKQLPNGAFIEVHQPLGPVDDHGHPIPLEYAGAQVPKQLNQLG LADSETQGIFSTDDPAIVSRVNEIRHENHAEETEMFRQLNEANRRDDEENDRI >gi|227860832|gb|ACLH01000088.1| GENE 57 61175 - 62395 1593 406 aa, chain - ## HITS:1 COG:Cgl2142_2 KEGG:ns NR:ns ## COG: Cgl2142_2 COG0723 # Protein_GI_number: 19553392 # Func_class: C Energy production and conversion # Function: Rieske Fe-S protein # Organism: Corynebacterium glutamicum # 203 406 1 204 204 353 79.0 3e-97 MSNVKKNYSRKELDAMSNDELAALGTELDDVTVAYRKERFPVEGDPAEKRAAGNVTFWLI ISVLMGIAFLGVYLFWPWEYKMLGEDGLWWHTLYTPLLGLTSGLCILGLGFAIVQYVKKI LPEEISVQRRHDGPSEEVDRRTLTALLNDSWTTSTLGRRKTIMGLLGGAGVLFGLTVIAP LGGAINNPWKKRHDLDYTGDGTLWTSGWTMHEKGVKLYLARDTGTIAEKHEGESGSHYTT RGVTRLVRVRPEDLAAGGMETVFPLAAEDVNDGAEYSEDKDVYTNHMHSIHGNRNAVMLI RLRNDDAKKAIECKGQEDFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDAL HYGKPVFGPAARALPQLPIDVDEEGYLIAKGNFIEPVGPAFWERKS >gi|227860832|gb|ACLH01000088.1| GENE 58 62392 - 63276 1089 294 aa, chain - ## HITS:1 COG:Cgl2143 KEGG:ns NR:ns ## COG: Cgl2143 COG2010 # Protein_GI_number: 19553393 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Corynebacterium glutamicum # 3 294 17 308 308 435 73.0 1e-122 MDNIQQPAAVEDTTAAAKKTRRRRKAKRTLAGVFALSIGLTGAGVLASALTPDAQVATAA KDDQALVQEGKDIYEVACITCHGANLQGIQDRGPSLVGIGAGSVYFQVHSGRMPMMSNDA QAERKTPRYTEQQTLALAAYVAANGGGADIVYDEDGSVAQESLRGANYNGQIQAEDVAKG SELFRMNCASCHNFTGRGGALSSGKFAPPLDPANEQEIYQAMLTGPQNMPKFSDRQLTAD EKKDIIAYLKSAKETPSPAGWSLGGLGPVAEGLAMWIIGISLLCVAAMWIGSRS >gi|227860832|gb|ACLH01000088.1| GENE 59 63347 - 63931 603 194 aa, chain - ## HITS:1 COG:Cgl2144 KEGG:ns NR:ns ## COG: Cgl2144 COG1845 # Protein_GI_number: 19553394 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Corynebacterium glutamicum # 1 194 1 196 196 233 70.0 1e-61 MAAPRVAALNRPNMVSVGTIVFLSQELMFFAGLFAMWFTSRANGQEGDWAEHTAHINVPM GFLITSVLVLSSVTSQFGVFAAERGDVYKLRLWYSVTIALGVVFLGIMAFEWTELIMAGL TVQSSVFGSVFYILTGFHAAHVTAGLIAFGIILARIARSKFTPAQATAAMAVSYYWHFVD VVWIGVFVVIYLVQ >gi|227860832|gb|ACLH01000088.1| GENE 60 64516 - 64947 753 143 aa, chain - ## HITS:1 COG:no KEGG:cauri_1700 NR:ns ## KEGG: cauri_1700 # Name: ctaF # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 143 1 143 143 258 100.0 7e-68 MRATSKVFYSIATYLFVSLIVYVIGVNYVKDDGYMYGTEWVGIVGMVLAMLLCLMLGGYL HFTDSRSDIAPEDWEEAETEDAAGILGFFSPSSIWPLCMTGSIAVLGLGIIFLYFWMIIL GAVLLVTSVTGLSLQYGLPKEKH >gi|227860832|gb|ACLH01000088.1| GENE 61 64967 - 66046 1810 359 aa, chain - ## HITS:1 COG:Cgl2147 KEGG:ns NR:ns ## COG: Cgl2147 COG1622 # Protein_GI_number: 19553397 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Corynebacterium glutamicum # 1 351 1 354 359 493 69.0 1e-139 MGQRKQRNLGRKAGLAGVIALGGLALAGCDVAAPTAVENLLGMGWPKGVTPEATSMYNFW IWVWVAAWIIGFIMWGLFLTAIFRWNAKKAEKAGKGEFPKQLQYNVPLEMALTIIPILII MGLFFFTVQAQQKVTALDKNPEVTVDVTAFQWNWKFGYAENKVDGENYDGADAERQKLAE ESSIDPEGTDNPNPIHGKSMGDISYLNFNKIETVGTTEEVPVLVLPVDTPIEFRLASGDV SHSFWVPEFLFKRDAYAHPENNSQERRFQVEKIEEKGAFVGRCAEMCGTYHAMMNFEIRV VDRADFNEYLKFREENPQATNAEALEHIGEEPYAVTTAPFNSLRDTRDADNFVDTAEAA >gi|227860832|gb|ACLH01000088.1| GENE 62 66401 - 68323 2375 640 aa, chain + ## HITS:1 COG:Cgl2148 KEGG:ns NR:ns ## COG: Cgl2148 COG0367 # Protein_GI_number: 19553398 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Corynebacterium glutamicum # 1 640 1 640 640 1110 82.0 0 MCGLCALLSADRNAAQHLEALEQSLQCMRHRGPDAAGTWHDDDAAFGFNRLSIIDLEHSN QPLRWGPEDNPERYALTFNGEIYNYVELREELRAAGYTFNTEGDGEPIVVGYHHWGKDVV EHLRGMFGFVIWDTETRTMFAARDQFGIKPLYYATTDAGTVFASEMKCILSMADSLGLDL SLDRRAIEHYVDLQYVPEPESLHANIRRVESGCTVTLRPGGEVVSERYFKPRFPIQPVKQ GEERKLFDKIARALEDSVEKHMRADVTVGSFLSGGIDSTAIAALAKRHNPDLLTFTTGFE REGYSEVDVAAESAAAIGVEHIVKIVSPEEYAEAVPKIMWYLDNPVADPSLVPLYFVAQE ARKHVKVVLSGEGADELFGGYTIYKEPLSLAPFEKIPSPLRRGLGKLSHVLPEGMKGKSL LNRGSMTMEERYYGNARSFNFEQLQRVLPWAKPEWDHREVTAPIYTQSQDFDPVARMQHL DLFTWMRGDILVKADKMNMANSLELRVPFLDKEVFKVAETIPYDLKISHGTTKYALRKAM EQIVPPHVLHRKKLGFPVPMRHWLAGDELYGWAQDQITESQTEDIFNKKEVLEMLKEHRD GISDHSRRLWTVLSFMIWHGIFVEERIDPKIEQRDYPVKL >gi|227860832|gb|ACLH01000088.1| GENE 63 68394 - 68738 502 114 aa, chain - ## HITS:1 COG:Cgl2149 KEGG:ns NR:ns ## COG: Cgl2149 COG0316 # Protein_GI_number: 19553399 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 1 114 1 114 114 186 84.0 1e-47 MTAPASATGVILTEAAAAKAKSLLDQEGRDDLSLRIAVQPGGCAGLRYQLYFDDRTLDGD KVDSIGGVNLVVDKMSIPYLTGAKIDFSDTIEAQGFTIDNPNAGGSCACGDSFN >gi|227860832|gb|ACLH01000088.1| GENE 64 68919 - 69611 819 230 aa, chain + ## HITS:1 COG:no KEGG:cauri_1704 NR:ns ## KEGG: cauri_1704 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 230 11 240 240 414 99.0 1e-114 MKLPWQKDDKTSSPAEHTPAPEEQPAAEKPHRKGYTPPKGRPTPKRDAQEIARGVKRDPR GMSDAQRYQHRKELKASMSKAEWKEYKRKERQESRERNKVAQERMAAGDERYLLARDKGD VRRYVRDWVDSHRFINEWVMPFAIVLLVLMFVSTRDPRLSQIISIGAMAVIVVFAVEGFW LARKCNNAVRLKFPGTTEAGFGLGFYAYSRASQPRKWRTPRPQVERGATV >gi|227860832|gb|ACLH01000088.1| GENE 65 69624 - 70541 798 305 aa, chain + ## HITS:1 COG:Cgl2152 KEGG:ns NR:ns ## COG: Cgl2152 COG2038 # Protein_GI_number: 19553402 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 20 304 37 330 358 138 37.0 1e-32 MPEFTAVPQLRPSIAAQPNRMAEIAAWLAAAQDSPQATALERPRAVVFEGARPTAERTVD GVAITQHSPADEERWRDNLLSAAQRAGAGIDFVECTSSDSENSKPCGSTTAMSPAECESF VSLGMTTADREIDSGADLLIASACDIGTETVATSVMGRITHTEPVAIVGTNTLASGITDA QWKARVSVVRDSMFRARNLEGWEVVQTIGSPNLAALVGFIAQATARRTPVLIDGPLAATA AVLAERTAPGVKGWLRAGSTTPEPAHALALKELGLNPLLDLNLSEGFPLGALAALPLVQL AAELA >gi|227860832|gb|ACLH01000088.1| GENE 66 70551 - 71654 1507 367 aa, chain - ## HITS:1 COG:Cgl2155 KEGG:ns NR:ns ## COG: Cgl2155 COG0115 # Protein_GI_number: 19553405 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Corynebacterium glutamicum # 2 364 4 366 367 544 72.0 1e-155 MLNYTVTRTDTPTSPERLKEILANPGFGKYFTDHMVTIDWTEDKGWHDAQVRPYAPFSMD PASTVFHYGQAIFEGIKAYSQPDGSIATFRPEQNAQRLQASAERMAMPQLPEEEFIESLR QLVDVDQTWVPEAGGEAALYFRPFMIATDVSLGVHPAHSYRYVVIASPAGAYFSGGIKPV SVWLSTDYVRAAPGGTGAAKFAGNYAASLLAQAQAAEKGCDQVVWLDAIQRTYIEEMGGM NLAFVYGEEGNQTLVTPELSGSLLPGITRKSLLQVAEDMGLKVEERRITYKEWEQDVASG AMVEAFACGTAAVITPVGHVMGNETDFHINNDEAGTTTMALRERLTGIQRGSVEDTHGWL HTLVEAK >gi|227860832|gb|ACLH01000088.1| GENE 67 71820 - 73125 1657 435 aa, chain + ## HITS:1 COG:Cgl2156 KEGG:ns NR:ns ## COG: Cgl2156 COG0260 # Protein_GI_number: 19553406 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Corynebacterium glutamicum # 8 433 20 447 513 420 57.0 1e-117 MASSTFELPARGSFPTVELAKKAPKQADALLIATFAGEEGLEVPGTSLLGSSALRSTYEA LAAVGATGKAGEIVKVPAPQKAGAAQVIALGLGDVEALDDEALRRAAGSAARGTAGVGTI VTTLADFGVTAAVEGLILGGYAYRGIRSTELTDKEQPASFIVVADKSVSEEFEAARTVAE SVLLARDLVNAPANELYPESYADFLSGQAKEAGLDVEVLDEKQLEKQGFGGILAVGKGSA RPPRLVRLSWKPKKAKKHVALVGKGITFDTGGISLKPGNGMWDMISDMGGSAAMAATIIA AAKLKLPVQITATLPLAENMPGSGATRPGDVITHYGGLTSEVLNTDAEGRLVLSDAIARA SEDKPDYLIETATLTGAQIVALGSRTSGIMGSEVFRDRLAEIGREVGENAWAMPLLEEHD EEIKSQAADIRNINA Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:01:05 2011 Seq name: gi|227860831|gb|ACLH01000089.1| Corynebacterium aurimucosum ATCC 700975 contig00170, whole genome shotgun sequence Length of sequence - 63055 bp Number of predicted genes - 58, with homology - 57 Number of transcription units - 37, operones - 12 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 115 143 ## cauri_1707 leucyl aminopeptidase (EC:3.4.11.1) + Term 143 - 181 10.0 2 2 Tu 1 . - CDS 164 - 1438 1136 ## COG2066 Glutaminase - Prom 1677 - 1736 3.2 + Prom 1369 - 1428 1.8 3 3 Tu 1 . + CDS 1467 - 2009 676 ## COG1335 Amidases related to nicotinamidase + Term 2017 - 2053 -1.0 - Term 1741 - 1782 0.6 4 4 Tu 1 . - CDS 2030 - 2437 557 ## CE2097 hypothetical protein + Prom 2484 - 2543 2.1 5 5 Tu 1 . + CDS 2586 - 4286 2458 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 4311 - 4349 5.2 6 6 Op 1 . + CDS 4557 - 5702 1070 ## COG0477 Permeases of the major facilitator superfamily 7 6 Op 2 . + CDS 5786 - 8653 3620 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 8 6 Op 3 18/0.000 + CDS 8657 - 9769 1745 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 9 6 Op 4 . + CDS 9812 - 10204 650 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Term 10228 - 10258 1.9 10 7 Op 1 13/0.000 + CDS 10274 - 11080 1002 ## COG0321 Lipoate-protein ligase B + Term 11087 - 11130 -0.3 11 7 Op 2 . + CDS 11162 - 12253 1487 ## COG0320 Lipoate synthase 12 7 Op 3 . + CDS 12296 - 13081 1125 ## cauri_1718 hypothetical protein + Term 13101 - 13151 21.5 - Term 13248 - 13283 5.3 13 8 Tu 1 . - CDS 13347 - 13781 436 ## cauri_1719 hypothetical protein - Prom 13811 - 13870 3.2 + Prom 13722 - 13781 2.1 14 9 Tu 1 . + CDS 13911 - 15344 2169 ## COG0174 Glutamine synthetase - Term 15380 - 15430 9.0 15 10 Tu 1 . - CDS 15522 - 16163 457 ## COG5398 Heme oxygenase - Prom 16183 - 16242 3.6 16 11 Op 1 . - CDS 16332 - 17297 1230 ## cauri_1722 hypothetical protein 17 11 Op 2 10/0.000 - CDS 17290 - 18084 199 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 18 11 Op 3 8/0.000 - CDS 18084 - 19052 795 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 19 11 Op 4 . - CDS 19108 - 20154 1024 ## COG4558 ABC-type hemin transport system, periplasmic component 20 11 Op 5 . - CDS 20165 - 22015 1405 ## cauri_1726 putative cell-surface hemin receptor - Prom 22077 - 22136 3.4 + Prom 22006 - 22065 2.3 21 12 Tu 1 . + CDS 22130 - 22594 273 ## DIP0624 hypothetical protein 22 13 Tu 1 . + CDS 22734 - 23702 661 ## COG1275 Tellurite resistance protein and related permeases 23 14 Op 1 . - CDS 23738 - 24352 785 ## cauri_1728 putative secreted protein - Prom 24373 - 24432 2.9 24 14 Op 2 . - CDS 24448 - 24978 637 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 25 14 Op 3 . - CDS 24997 - 25644 552 ## cauri_1730 hypothetical protein 26 15 Op 1 . - CDS 25838 - 25990 295 ## 27 15 Op 2 . - CDS 25995 - 27449 1888 ## COG0498 Threonine synthase 28 16 Tu 1 . + CDS 27527 - 28780 1179 ## COG0477 Permeases of the major facilitator superfamily - Term 28843 - 28895 1.0 29 17 Op 1 . - CDS 29092 - 29529 536 ## cauri_1735 putative secreted protein 30 17 Op 2 . - CDS 29558 - 29875 481 ## cauri_1736 hypothetical protein - Prom 29895 - 29954 1.9 31 18 Op 1 4/0.000 - CDS 30030 - 33089 2229 ## COG1391 Glutamine synthetase adenylyltransferase 32 18 Op 2 . - CDS 33097 - 34434 1185 ## COG0174 Glutamine synthetase 33 19 Tu 1 . + CDS 35113 - 35709 104 ## cauri_1739 hypothetical protein + Prom 35717 - 35776 1.7 34 20 Tu 1 . + CDS 35819 - 37546 1726 ## cauri_1740 hypothetical protein + Term 37600 - 37649 8.1 - Term 37588 - 37637 7.3 35 21 Tu 1 . - CDS 37703 - 37903 356 ## cauri_1741 hypothetical protein + Prom 37916 - 37975 3.4 36 22 Tu 1 . + CDS 38039 - 39310 1338 ## COG0153 Galactokinase 37 23 Tu 1 . - CDS 39307 - 40710 1114 ## COG0557 Exoribonuclease R - Prom 40730 - 40789 3.8 38 24 Op 1 3/0.000 - CDS 41195 - 42364 1133 ## COG0406 Fructose-2,6-bisphosphatase 39 24 Op 2 7/0.000 - CDS 42361 - 43077 1013 ## COG1579 Zn-ribbon protein, possibly nucleic acid-binding 40 24 Op 3 . - CDS 43078 - 43926 865 ## COG0327 Uncharacterized conserved protein + Prom 43931 - 43990 3.0 41 25 Op 1 2/0.000 + CDS 44029 - 44520 655 ## COG0394 Protein-tyrosine-phosphatase 42 25 Op 2 . + CDS 44552 - 45541 1206 ## COG3346 Uncharacterized conserved protein - TRNA 45639 - 45714 90.4 # Val TAC 0 0 - Term 45730 - 45799 3.0 43 26 Tu 1 . - CDS 45828 - 46265 606 ## cauri_1749 hypothetical protein 44 27 Tu 1 . + CDS 46439 - 49195 4288 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component + Term 49243 - 49286 12.1 - Term 49399 - 49431 1.1 45 28 Tu 1 . - CDS 49457 - 50473 875 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 46 29 Op 1 . + CDS 50500 - 50802 424 ## cauri_1752 hypothetical protein 47 29 Op 2 . + CDS 50799 - 51578 1133 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 51803 - 51844 4.8 48 30 Tu 1 . - CDS 51582 - 52031 242 ## cauri_1754 putative secreted protein - Prom 52196 - 52255 1.8 49 31 Op 1 . - CDS 52431 - 53234 782 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 50 31 Op 2 . - CDS 53245 - 53892 425 ## cauri_1756 putative secreted protein 51 32 Op 1 . - CDS 54167 - 55765 1558 ## COG0668 Small-conductance mechanosensitive channel 52 32 Op 2 . - CDS 55809 - 57371 1431 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 53 32 Op 3 . - CDS 57446 - 58519 1121 ## COG2860 Predicted membrane protein - Prom 58661 - 58720 2.2 - TRNA 58551 - 58624 84.5 # Met CAT 0 0 - Term 58711 - 58746 2.0 54 33 Tu 1 . - CDS 58861 - 59286 385 ## cauri_1767 hypothetical protein - Prom 59322 - 59381 1.6 + Prom 59119 - 59178 1.5 55 34 Tu 1 . + CDS 59426 - 60760 1445 ## COG1106 Predicted ATPases 56 35 Tu 1 . - CDS 60790 - 61224 217 ## KRH_22810 hypothetical protein - Prom 61264 - 61323 2.3 + Prom 61233 - 61292 1.6 57 36 Tu 1 . + CDS 61513 - 61746 210 ## cauri_1762 hypothetical protein 58 37 Tu 1 . + CDS 61884 - 63054 966 ## cauri_1763 hypothetical protein Predicted protein(s) >gi|227860831|gb|ACLH01000089.1| GENE 1 2 - 115 143 37 aa, chain + ## HITS:1 COG:no KEGG:cauri_1707 NR:ns ## KEGG: cauri_1707 # Name: pepB # Def: leucyl aminopeptidase (EC:3.4.11.1) # Organism: C.aurimucosum # Pathway: Glutathione metabolism [PATH:car00480]; Metabolic pathways [PATH:car01100] # 1 37 463 499 499 68 100.0 7e-11 IAGPSWNGSAPRGYTPKRATGVPVRTVVAALREIAEA >gi|227860831|gb|ACLH01000089.1| GENE 2 164 - 1438 1136 424 aa, chain - ## HITS:1 COG:Cgl2430 KEGG:ns NR:ns ## COG: Cgl2430 COG2066 # Protein_GI_number: 19553680 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Corynebacterium glutamicum # 1 408 2 408 413 519 62.0 1e-147 MKTPIPFYLQKILNGVHDHDSGEVADYIPELASANPDQLGVALCSVTGHLYSAGDAENRF TIQSISKPFVYALALSELGLDAVRDVVGLEPSGQAFNELSLAKDHRPVNPMINAGAIVVN QLINGVDSSVEDRVEKIRSFISQLAGREVDVDKRLCDSELEHAERNLSLAHMLRSYGIIQ DDAHDAVLSYTSQCALSVDVRDLAVMTATLANGGRQPVTGEKILDADVCRMTLAVMSSCG MYDGAGRWMTEVGIPAKSGVAGGLIGTLPGQIGVATFSPRLDEQGNSVRGTAIFRELSSD MGLHLMSTENRFGVHPVRSVDEDDETAIIRLQGHINFTATEAILHELEERQFSGKRLALD FSQVSGLHKVGRRMLKEGLRRLREEGNEVALVDDDGLVTDRAMSDGTVLPLADKEDYVIA GEEV >gi|227860831|gb|ACLH01000089.1| GENE 3 1467 - 2009 676 180 aa, chain + ## HITS:1 COG:Cgl2436 KEGG:ns NR:ns ## COG: Cgl2436 COG1335 # Protein_GI_number: 19553686 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Corynebacterium glutamicum # 1 178 1 186 186 211 61.0 5e-55 MTPALIIVDVQYDFCPGGALGTERGNEVAERIGALQASYETVVATQDWHIDPGSHFAENP DFVDTWPTHCVADSFGAAMHEAIAPAQAYFKKGEYTAAYSGFEGAANGVSLADWLREHNV TAVDIVGIATDHCVRATAADALKEGFTVRVLADYCAPVDEARGAAALEDLAKAGATIVSE >gi|227860831|gb|ACLH01000089.1| GENE 4 2030 - 2437 557 135 aa, chain - ## HITS:1 COG:no KEGG:CE2097 NR:ns ## KEGG: CE2097 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 1 125 36 160 166 153 66.0 2e-36 MFNPFRRNSSKSQLRPPRAPGETIRAEDAQELQAWAQGRAYIEAFVEPETVVNEMSVVVV DESGAFIRRRIGGPKGIDAVAKLLRCDVYDVEETGYPQRMRERIERERILRKREEQRERR ERFEQRQQQNQQGDS >gi|227860831|gb|ACLH01000089.1| GENE 5 2586 - 4286 2458 566 aa, chain + ## HITS:1 COG:Cgl2158 KEGG:ns NR:ns ## COG: Cgl2158 COG0508 # Protein_GI_number: 19553408 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Corynebacterium glutamicum # 2 566 121 675 675 619 70.0 1e-177 MAHSVVMPELGESVTEGTITQWLKSVGDTVEVDEPLLEVSTDKVDTEIPSPVAGTILEIK AEEDDTVDVGAVIAIIGDEGESAPAAEESEDSSEKAAETPDKPAEDAESEAPAASGDATD VEMPELGESVTEGTITQWLKSVGDTVEVDEPLLEVSTDKVDTEIPSPVAGTLVEILAEED DTVDVGAVIARVGDGSAAASEKPAAKEEKAEEKKEEPKAEEKKEEPKAEEKKPAASQSSE PKTSETSTKVNNGDNVPYVTPLVRKLAEKHGVDLSTVSGTGVGGRIRKQDVLAAAGEGEA PASSASASSSNPRARWSTKSVDPEKQELIGTTQKVNRIREITASKMVEALQISAQLTHVQ EVDMTAIWDMRKQSKQAFIDKYEANLSFLPFIVKATVEALVSHPNVNASYNPETKEMTYH ADVNVAIAVDTPRGLLTPVIHKAQELTLPEIAQKIAELADKARNNKLKPNDLTGATFTVT NIGSEGALLDTPILVPPQAGILGTAAITKRAVVVTEDGQDAIAIRQMCYLPFTYDHQVVD GADAGRFITTIKDRLETADFEADLDL >gi|227860831|gb|ACLH01000089.1| GENE 6 4557 - 5702 1070 381 aa, chain + ## HITS:1 COG:Cgl0322 KEGG:ns NR:ns ## COG: Cgl0322 COG0477 # Protein_GI_number: 19551572 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 6 375 22 403 410 202 38.0 8e-52 MVSQKWFRVALGMFLVACGANLFAPMVVVYQVTTELGVLQTTFLFGIYALGIMVALFIGG PLSDSLGRRAIMRPAVLITTAGSLVFLGGAGGAFLPLLLGRLCAGAAVGLAMSSGAAWIK ELSTHLSVGAKRSSIALSAGFASAPGVAGITAEFLPWPTVLPYLLHIGLALVVVPLVWTV PEDQSKQSLSQRRTFIPTSLITPRYLPVVAYAPWVFGSATTAFVFLPSQLSEHLRHPILI AGLCALLTMGSGVIIQQLAGRIRVTAFHGMVLAAIGMALCLGILAAAEHNWAVFLLPLAA ITMGSSYGIGMLSGLAETQAIAHPAELGAATGVFYSLTYLGFFAPFILSLLGPVTGYSTA FIIGLSIAALTAVTLRLRFKG >gi|227860831|gb|ACLH01000089.1| GENE 7 5786 - 8653 3620 955 aa, chain + ## HITS:1 COG:RSc3295_2 KEGG:ns NR:ns ## COG: RSc3295_2 COG1003 # Protein_GI_number: 17548012 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Ralstonia solanacearum # 431 942 1 504 511 581 59.0 1e-165 MDFTSRHLGPDAAERETMLKAVGYDSVDALVDAALPTSIRAAEALNLPEALSEDDAQAKL REYASQNVVLKSFYGQGYSDTLTPAVIRRGLLEDAGWYTAYTPYQPEISQGRLEALLNFQ TMIESLTGLPIANASLLDEASATAEAVGLMARAVKKGRRVLLDSRLHPQVLAVAAERARA IELEVEIADVRDGIVGEDLVGAVLAYTGTEGDIVDPRAAIEELHTRGALAAVVADPLSLL LLEAPGSMGADVVLGSSQRFGVPLFFGGPHAAFMSVTDKLKRQLPGRIVGVSKDAAGRPA YRLALQTREQHIRRERATSNICTAQALLANVASMYAVYHGPKGLKEIAQRAHDRASAFAA AVTGAGKEIVSRDFFDTVTVTGVDAAAVKAQLQEKGYLVRAIGTDKVSVSFGESATSEDV NTLATAFGATDFTASEPASSGSFEIPSSVQRSEEPLQHEIFNSLHSETQMLRYLRTLADK DLALDRTMIPLGSCTMKLNPTSAMEPISWPEFAGIHPYAPEETTAGWRALIDELESWLAE ITGYAQVSIQPNAGSQGELAGLLAIRRYHVANGDHGRDVILIPASAHGTNAASATLANLR VVVVKTADDGSIDVADLDAKLEQHGEHVAGIMITYPSTHGVFDPEVREVCDKVHAAGGQV YIDGANMNALAGWARPGVFGGDVSHLNLHKTFTIPHGGGGPGVGPVGVAKHLVPFLPTDA NNPQLDPAQPAAEGTGVPSTASRYGSAGVLPISWSYLAMVGAQGLTETTSHAILGANYLA QNLKDSFPVLYTGNAGLVAHECIFDLRELTDASGVTAADVAKRLVDYGFHAPTLSFPVAG TLMVEPTESEDLGELDRFIEAMRSIRAEIQEIIDGKVAYEDSVIHHAPFNAESVAADEWN FAFSRQQAAYPVTSLRANKYFPPVRRIDEAYGDRNLVCTCPPPEAFDYSDENQEV >gi|227860831|gb|ACLH01000089.1| GENE 8 8657 - 9769 1745 370 aa, chain + ## HITS:1 COG:BS_yqhI KEGG:ns NR:ns ## COG: BS_yqhI COG0404 # Protein_GI_number: 16079513 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Bacillus subtilis # 7 368 5 362 362 290 44.0 4e-78 MTDYLHSPLHAEHEKLGATFTPFGPWEMPLKYDNELEEHRAVRNAAGLFDLSHMGEIWVN GPDAAEFLSYCFISNLTTLKEGKAKYSMICAEDGGIIDDLITYRLEETKFLVVPNAGNAD TVWDALNERAEGFDVDLKNESRDVAMIAVQGPKALEILVPLVEDTKQQAVMDLPYYAAMT GKVARKYAFICRTGYTGEDGFELIVYNSDAPELWEELLKAGEEYGIKPCGLAARDSLRLE AGMPLYGNELTRDITPVEAGMSRAFAKKEQDFVGAEVLRQRAEEGPQAVITGLVSSQRRA ARAGSEVYVGENKVGTVTSGQPSPTLGHPVALALIDTAAGLEPGAAVEVDIRGKRYPFEV SALPFYKRDK >gi|227860831|gb|ACLH01000089.1| GENE 9 9812 - 10204 650 130 aa, chain + ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 1 120 1 116 132 109 48.0 2e-24 MANLPSDFSYSEDHEWINATADSVVGSTVRIGITSVATDRLGEVVFAELPAVGDTVEHGE TCGEVESTKSVSDLYSPVTGTVTAVNEGVHDDYAVINNDPFGEGWLFEVEVTEAGELMTA DEYASANGVD >gi|227860831|gb|ACLH01000089.1| GENE 10 10274 - 11080 1002 268 aa, chain + ## HITS:1 COG:Cgl2159 KEGG:ns NR:ns ## COG: Cgl2159 COG0321 # Protein_GI_number: 19553409 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Corynebacterium glutamicum # 1 252 1 245 251 328 65.0 6e-90 MTAPREPFFPVDRSIRASDEPLEIRRLGRMGYQEAWDLQAEIAAARAAGTQGDVILVVEH PNVYTAGKRTQPEDMPDNGLPVIDVDRGGRITWHGEGQLVVYPIIKLAEPVDVVDYVRRL EEAIIQAVRELGVSTAGRIDGRSGVWVPSTTQAADPAAPKRDRKLGALGIRVTRGVTMHG LALNCTNTLEYYEHIVACGIDDADVSTLSLELGREVTMEEAEAPLLDALLKALSGELTVA DHTFASAPDPIKVANEKARQARKAAQEK >gi|227860831|gb|ACLH01000089.1| GENE 11 11162 - 12253 1487 363 aa, chain + ## HITS:1 COG:Cgl2160 KEGG:ns NR:ns ## COG: Cgl2160 COG0320 # Protein_GI_number: 19553410 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Corynebacterium glutamicum # 1 346 1 346 348 569 79.0 1e-162 MTVKPEGRKMLRIEKKNAESPIEQKPRWIRNQVRTGPGYEDMKSRVTGASLHTVCQEAGC PNIHECWESREATFLIGGDKCTRRCDFCDIATGKPAELDRDEPRRVAENIQEMDLNYTTI TGVTRDDLPDEGAWLYAEVVRKIHELNPNTGVENLTPDFSGKPDLLQEVFEARPEVFAHN LETVPRIFKRIRPAFRYERSLDVIRQAHDFGLITKSNLILGMGETAEEIEEALRDLRSAG CDIITITQYLRPGPRFHPIERWVRPEEFVEHSKLAKELGFGGVMSGPLVRSSYRAGRLYV QAMEARGLELPENLKHLAETSQGATAQEASTLLEKYGPSEETPVTTRMAKTPAQSNSVAA TIR >gi|227860831|gb|ACLH01000089.1| GENE 12 12296 - 13081 1125 261 aa, chain + ## HITS:1 COG:no KEGG:cauri_1718 NR:ns ## KEGG: cauri_1718 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 261 1 261 261 491 100.0 1e-137 MAKDDKASLKDAKKQERAAKRAQRKQNWSQMWQAFNMQRKQDKALIPIMLAAFLGMGLLF FLIGMLFNGQWFMLIIGLGLGAMLAMFLFTRRLERDMYKKVEDQPGVAGWALEQQLRNTV GVVWKVKPGVAATRQQDLVHRVIGNSGVIFVVEGDRKRVAPTLNRLKKRVDRLAGGVPVY EVFVGSGEDEVPVSKLRSHIMKLPRNYNKNETYENIRRIEAMDDLPGTTPGLPKGPMPRQ AQNMAGMNRRMRRMQERKGGK >gi|227860831|gb|ACLH01000089.1| GENE 13 13347 - 13781 436 144 aa, chain - ## HITS:1 COG:no KEGG:cauri_1719 NR:ns ## KEGG: cauri_1719 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 144 1 144 144 251 100.0 6e-66 MADNNDGFEHGQWPGQTMGLPKEGSGALASVMRRTLGVLIDWLLAMLIANLLELFTDSLG GPAFLGYAVWVVMGIVCGWLFARTPGMAVLGMGVARLDKPGTSVGLWRAAVRTLLTAVLF PAAMVDADGRGLHDRATGTAVIMA >gi|227860831|gb|ACLH01000089.1| GENE 14 13911 - 15344 2169 477 aa, chain + ## HITS:1 COG:Cgl2165 KEGG:ns NR:ns ## COG: Cgl2165 COG0174 # Protein_GI_number: 19553415 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 1 477 1 477 477 800 81.0 0 MSFETIQDVIAFIKEEDVKFVDIRFTDVPGTEHHFSIPAEEFTEDAAAEGLAFDGSSIRG FTTIDESDMTLLPDPKTAFVDPFRTAKTLNIKFFVHDPFTLEPFSRDPRNIARKAEEYLA STGIADTCNFGAEAEFYIFDSVRYGTDVHNGFYEVDTDEGWWNRGSETNFDGTPNTGFKT RVKGGYFPTAPVDKHGEVRDAMVEQLQKAGFVIERFHHEVGSGQNEINYRFNSLLHAADD IQTFKYIIKNTAEQFGKSVTFMPKPLAGDNGSGMHAHMSLWQDGKPLFHDEAGYAGLSDM ARYYIGGILAHAPAVLAFTNATLNSYHRLVPGFEAPINLVYSQRNRSAAIRIPITGSNPK AKRIEFRAPDPSGNPYFGFAAMMMAGLDGIKNRIEPHAPVDKDLYELPPAEAASIPQAPT SLEASIAALEEDNEFLTEGDVFSEDLIETYINYKRENEIAPVRLRPTPQEFEMYYDC >gi|227860831|gb|ACLH01000089.1| GENE 15 15522 - 16163 457 213 aa, chain - ## HITS:1 COG:Cgl2178 KEGG:ns NR:ns ## COG: Cgl2178 COG5398 # Protein_GI_number: 19553428 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Corynebacterium glutamicum # 6 210 8 215 215 167 49.0 1e-41 MTTTLNKSLSVALREATARAHEHAENSAFMQRLLSGELNKSAVADLAGQLWFVYGALENA VRSVATTPIAGAVADPRLERRQALEADLKVLVGENWREEIRILPATRSYSARLEEIVGKP VEVVAHHYVRYLGDISGGQVIAARLGAHYGVPPEALNFYDFTSIGKIPPYRTGYRERVDS LELNVEQREAMLSEAERAFNFNSGIFAELGRLY >gi|227860831|gb|ACLH01000089.1| GENE 16 16332 - 17297 1230 321 aa, chain - ## HITS:1 COG:no KEGG:cauri_1722 NR:ns ## KEGG: cauri_1722 # Name: htaC # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 7 321 1 315 315 576 99.0 1e-163 MFKKILVTAIAATAITVPQATAAEAESCTIESGTINWGVKHSWRSYIKGRIAKGDWETTG TVKEDGDPTGSDFTFGFEVDPATSTVSVDEAGNVTASKIKAKDSSITFTGHHGALYSKMI NPFVETNGDKAQLGSGYEAYFVEGKHMTEYTPEDRVEANKRTGEGAFGHGKAQWSKDGDT LTLNASDVMYERQPGTNDSGDVEGVDFLFMGMYSADYNPEVDSAQLTLKLAPGCGQKKEE EKDPSEGEKPQNPSDGEKPKPQNPSKDKNLSSGENSSSISKVSNFWNYFLGIATVGSMIA ILWQAFVKSGAFDSARVFFQR >gi|227860831|gb|ACLH01000089.1| GENE 17 17290 - 18084 199 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 225 1 230 245 81 26 1e-14 MLNVDNLTVQVDGVTLVDSVTFNARPGEVTGLIGPNGAGKSTVLGAIAGDIDFSGEISVG GLSPKTSPRELARKRAVMLQDVAVSFEFLVRDVVAMGRRPWHGTPHAQLDEQFIEAALEI AGVAHLSGRDISTLSGGERARVAFARVLAQNTPIILLDEPTAALDIRHQEQLLGSVKALA REAGVTALVVLHDLNAAAAYCDHIVCVSCGGIAAQGRVAEVFTGPILSEVYGWPISVNGL QVQPQRATPTINSLFSHQLEDFHV >gi|227860831|gb|ACLH01000089.1| GENE 18 18084 - 19052 795 322 aa, chain - ## HITS:1 COG:Cgl0386 KEGG:ns NR:ns ## COG: Cgl0386 COG0609 # Protein_GI_number: 19551636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Corynebacterium glutamicum # 2 322 37 358 358 348 67.0 6e-96 MLAVLAGLISIVLGQYYIALSDLFPILALGPGQESLTASVVWNIRLPRLVLGLFVGAALG VAGTLMQAIFANPLAEPSIIGVTSGAGVGAAVAIVFNLTFVGTFTVPALAFLSALLVTFI IYQLARHNGRVTVVHLILTGIAINAVCNAIISFMVYLAPTANREAIIFWQMGSFNGSQWK HVWVVLPIVLIGIAVALRLGRQLDILALGERAAVHTGVDVSVLRIVAIVASAVLTAAAVS FAGLIGFVGLIVPHLLRSIVGPQNHILIPASALGGAVLIGFADVAARTLIPFADLPIGIF TALVGGPTFFILLRRMMRKGVH >gi|227860831|gb|ACLH01000089.1| GENE 19 19108 - 20154 1024 348 aa, chain - ## HITS:1 COG:Cgl0385 KEGG:ns NR:ns ## COG: Cgl0385 COG4558 # Protein_GI_number: 19551635 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Corynebacterium glutamicum # 15 343 18 354 359 375 57.0 1e-104 MKLLLRFLIPLLCIVGLTACGVQGSYTDQLPDPQDLSDPRSFEGVTEVSDFADIEPVSTK VQPALPVELTDADGYDVTVTDVSRILALDIYGTYTKTLSGLGLADNIVGRTVSSTEPNLA DRPVVTEGGHNINVEAVLELNPTLVIVDHSIGPRDAIDQIREAGVTTVVMEPQRTIDSVG EDIITLGETVGLPDEARKLSERSIKEIDESKEAIKTIAPEEPMRMAFLYARGNGGVFFIM GEGTGAQDLIEGIGGVDLAAENNLSYAEPANAEALARINPEVIIMMTDGLKSTGGVDGLL ERPGVAQTIAGQKQRIVTIPDGQSLAFGPMTGQTLVKLAKAVYDPDNA >gi|227860831|gb|ACLH01000089.1| GENE 20 20165 - 22015 1405 616 aa, chain - ## HITS:1 COG:no KEGG:cauri_1726 NR:ns ## KEGG: cauri_1726 # Name: htaA # Def: putative cell-surface hemin receptor # Organism: C.aurimucosum # Pathway: not_defined # 1 616 1 616 616 852 100.0 0 MIRNLWRSACGVVLAAPLALGAVPFLNSAPVAHAETSCTWNWGIKQSFRSYIKGNIARGG WGASGIGFSGDEKGNGAFVFQASAPTSSGGTVTIPFQGTLNFTGHDGVLDMTMSDFKVIA SGDQAKVTVDYVSYELNRSNYTRGAQIQGDDEVIAIINLQEPVKDNGSAVNLAGTTSLSA GGVKLFTGFYEQGEKLDPSSGTIALDGSCSGSGGSGGNGSGSKRKLNSITGTFTGFNKEA MAILSETNDTMNGITTFMGNTQSFLDELDSFKKRGNTTSGASGASASTSSGTSTSGSTTT SDLSGNGLPETAAAGSGNSGGASTASGSNSGATGATGSVAAASGASGAANETCQATGVTQ ATAQWGVKKSFQSYITGSIAQGKWQLSGVGYSNGRFQFSGNSGAVKDDTGAVRYGGNIQF TGHHGKLDLNIANLEISFNGKTGKLIGDVRSSNMEGEKKDFGRTAIADLNFTSLDVGTDA VSGEATVSLTDVGSKAFAEFYEPGTQLDPLSFNASLGGNADCNDTVGGTSGGSSSSAGDS AGSGSKGSGGVNSEAVDNALASDSSQGYEDGSKKFQIKSASSANGTTDDPVTYLLLFIAG LIIAGGSTSRLIMNNS >gi|227860831|gb|ACLH01000089.1| GENE 21 22130 - 22594 273 154 aa, chain + ## HITS:1 COG:no KEGG:DIP0624 NR:ns ## KEGG: DIP0624 # Name: not_defined # Def: hypothetical protein # Organism: C.diphtheriae # Pathway: not_defined # 7 137 6 142 183 106 41.0 4e-22 MHSHPHTDIFRSIYPDVDPTQKFPPTLSERAALAFAVGVFMFGGVKGDLLIAGAGLAFVV GCVWALSRKTPRRIRTEARSRFPQEPWAEAPSPFIPVLWFALGALAVAAWWFTPDEFLVW SACSIAILAAAVTWYMPVIQAQRSAAPVGPNVNL >gi|227860831|gb|ACLH01000089.1| GENE 22 22734 - 23702 661 322 aa, chain + ## HITS:1 COG:Cgl2804 KEGG:ns NR:ns ## COG: Cgl2804 COG1275 # Protein_GI_number: 19554054 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Corynebacterium glutamicum # 11 294 16 314 339 144 36.0 3e-34 MPAVTDKFRHLPPPGPAWGGSLMGTSIVSRLLVEEGMLTASAVFAALACVILLVLTVGFA AYRQPSFARTSMAEWSMYFIGILALGAALSGLTDIGTFRLVGFWIGGPVTVITWAIQLTR FDGQPRFTWGLPLVGPMISSSVAGFLALDYGEAYHVMGTVLFVMSISTAVPIFIRVYWAA WHGKVNLTGANSATAWVPLGVVGQSTTAMQILHPGTFSVYYGLTAMVIAIPLALYAMVTF YPNVARWVDYSPAWWACTFPPGTVSMGGHQVALVNGSELLDVIALSIPVLLIAHWSACSC RFISWLIEGRRAQRSGASPVSD >gi|227860831|gb|ACLH01000089.1| GENE 23 23738 - 24352 785 204 aa, chain - ## HITS:1 COG:no KEGG:cauri_1728 NR:ns ## KEGG: cauri_1728 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 204 1 204 204 343 100.0 3e-93 MLPVMLDSFGAMISRTLKKVTTATAFVALAGSVLGAGTAGAQEMSSVDSVKTSQIQELSS RLFGDSFSSSEDSEAPEGSGLIEKYEDVDGLQDKLPADEAQKVLNGTFTAKKNPEISVTF NEDGTLNFNDGCNSGGGSYKLDQTDAIVVENLNSTMRVCAPDEMADADALNAILSAKPVV FPVEGNTFALGSQGQVIQFEKAEN >gi|227860831|gb|ACLH01000089.1| GENE 24 24448 - 24978 637 176 aa, chain - ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 175 1 175 178 197 57.0 1e-50 MPTPDYIVSLREKIGHEQLFLPGVTAVIVRAVPTGSAIWELPSVLLAQRADTGAWGPISG ICEPGEEITATALREVKEEIGLDGRIEALLGVGQVGPVVYPNGDKCMFMDTAIRVSVPDD AEPVVSDEENLDAQWFSVAQMPTSVSARHRMIIGDAVAQMKHPQGFRPRMGYVKRT >gi|227860831|gb|ACLH01000089.1| GENE 25 24997 - 25644 552 215 aa, chain - ## HITS:1 COG:no KEGG:cauri_1730 NR:ns ## KEGG: cauri_1730 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 215 47 261 261 392 100.0 1e-108 MQPVPGEAFDFNLCTVAWSFVLDDGRTIAVTASHCGEPGDTVWAGAADGEFIYPAEPVGS IIYSDLSAPDTHQLDFALVEITRQAEFYVPQDMPTSVVAAEQEELPDEVCKLGRITGETC GPLTHGEGHGKLQFGERTVDTISARAHVCSTHGDSGAPVFGAPGSPYEGVIVGVLSGTTE AAAGSESCAHGSEAEMSFTPASDIEALLPEILAQL >gi|227860831|gb|ACLH01000089.1| GENE 26 25838 - 25990 295 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQEQFSGPEYFTEFDPEKFIRDMKQVAEMEKENKENKADSGEAAPEEDA >gi|227860831|gb|ACLH01000089.1| GENE 27 25995 - 27449 1888 484 aa, chain - ## HITS:1 COG:Cgl2171 KEGG:ns NR:ns ## COG: Cgl2171 COG0498 # Protein_GI_number: 19553421 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Corynebacterium glutamicum # 6 484 3 480 481 733 75.0 0 MQGVKYISTRDTDRHPASFTDILLGGLAPDGGLYLPETYPRIDDATLTHWRQTLAEGGYA ALAADVLKLFVDDIPAEDLEGIAQRAYTYPKFDHEEIVPVSELGEGLYIGHLSEGPTAAF KDMAMQMLGELFEYELARRGETLNILGATSGDTGSSAEYAMRGRKGIRVFMLTPAGRMTP FQQAQMFGLDDPNICNIALDGVFDDCQDVVKAVSADANFKAENRIGAVNSINWARLMAQV VYYINCYLKITTENTERVSFSVPTGNFGDICAGHIARQMGLPIDKLIVATNENDVLDEFF RTGSYRPRSSEQTYKTSSPSMDISRASNFERFAFDLLGRDAAQIKELFGTKVKEGGFNVD KQALDAAHAEYGFLSGSSTHADRLATIKDVHERYDVLVDPHTADGIKVARAVQEEYGVDT PIICLETALPVKFAETIKEAIGSEPEVPERFAEILEAERHVTDLPNDAAAVKDYITQYIK STEV >gi|227860831|gb|ACLH01000089.1| GENE 28 27527 - 28780 1179 417 aa, chain + ## HITS:1 COG:Cgl2173 KEGG:ns NR:ns ## COG: Cgl2173 COG0477 # Protein_GI_number: 19553423 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 10 399 1 390 408 347 51.0 2e-95 MWVAAVLVYIVAITGRTSFGVAGLEAIDRFDVDASRIAVFTSVQLGIYSLAQIPTGMLID KFGPRRLLVIGSIIMGAGQVLLGFTSNYWVAIAARLLIGAGDATAFLSVMRILPYWFPLH RTPMFTQVTSSLGQLGQFISALPFAMLLGWGGWTMAFVTLGAVGILIAVAAAVAVADSPE SLGIVPKPKEKPNAKPESTAALLSTVFRSPVAWQAFFIHWIGLGATNVFVMLWGVPLMTA GMDFSKTSAGWILTWFSVFMVLIGPLHGRLSSRSRGFRPWLALGFVAFHCAVWVLFFLFG GSYLSLIILISVVALCTPVANYGFDIVRENLDRRVVATATGLGNMGGFIATVIGAQLIGM VLDHLGNGPDYPFHDFRLAAWAVFGVWCIGIVGVLVTHILRSRGEEEGPHARIVQVS >gi|227860831|gb|ACLH01000089.1| GENE 29 29092 - 29529 536 145 aa, chain - ## HITS:1 COG:no KEGG:cauri_1735 NR:ns ## KEGG: cauri_1735 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 145 1 145 145 211 100.0 6e-54 MAVKSKQIIVVWVLVVVAVITAVGAGWWATERHQVPEGALTVEQVVDGGVPQDPSVGAEL DPAEKDRIVSLAEALGIPSESVPRGLLSVASDRYRSRQTLEADLEKAVEAGAITKDDAKG VLAAFDAGVVAPVDGPIFVESTPAE >gi|227860831|gb|ACLH01000089.1| GENE 30 29558 - 29875 481 105 aa, chain - ## HITS:1 COG:no KEGG:cauri_1736 NR:ns ## KEGG: cauri_1736 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 105 1 105 105 171 100.0 8e-42 MSLNLSLDLNDATLADLDAFLSAARAAGCDPAAALSVEGTVMRLDVDKPRVVPTEPKTEA PRRNSLDRSVAESTIRSIIDALSERLDSPHPAHGNSFGTFGPRAD >gi|227860831|gb|ACLH01000089.1| GENE 31 30030 - 33089 2229 1019 aa, chain - ## HITS:1 COG:Cgl2179 KEGG:ns NR:ns ## COG: Cgl2179 COG1391 # Protein_GI_number: 19553429 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Corynebacterium glutamicum # 6 1011 19 1036 1045 1213 64.0 0 MRPASVPSPATLGLTRPTAAEDLSRLGWDNPESLELLWTLAGAGDPDMALNTLMRIVEGA PEIGPAMREDETFRVRLIALLGGSSAFGDHLAANPETWHELQRALPTPTEMLHTLLTRVG AEPATYVEQPDQPDTASPDLTSPGTYRAAPGDHKASLKVAYRTLMMRIAAHDLAGTFHSR KGQSRPQPRVGFREVTRLTTALADAALTAALAGAVRVVYGDEPLDAQLAVIAMGKCGAGE LNYISDVDVIFVGSEATPRITRLASEFNRIGSACFFEVDANLRPEGKSGALVRTLDSHVA YYKRWAETWEFQALLKARPQTGYLPLGTDYLEQIGPMVWTASQRESFVEDVQAMRRRVLD NVPEEMRLRELKLGEGGLRDVEFAVQLLQLVHGRSDDSLRTLATVDALAALVRAGYVGRE DGTQLIEAYEFLRLLEHRLQLERFRRTHTLPEKDDNKALTWLAINSGFHPQGHQSAADQM NTQLRKVRLLISELHSRLFYRPLLNSVASMSADELKLSREAALLQLAALGYRHPDRAFEH LTSLAAGQSRKARIQAILLPTLMEWLSNTADPDMGLLNYRKLSEAAYDRTWFLRMLRDEG VVGQRLMKILGTSPFTSELIIRAPDVVKQLSDGAAGPKLLETKPEQVSSALINSTKRHAN PDKAVSVARSLRRAELARIAAADLLGFLPVQQVCFELSTIWNAVLEAALRAEVRAWRLSH EDAEPPARIAVIGMGRLGGMELGFGSDADVIVVAEPTGDNAEEEALPWAIGIIEKLRRRL AKPSGDPPLDVDLGLRPEGRSGAVVRSIESYERYYSRWGEPWEMQALLRAAFVAGDEEVG TRFLTMVDAFRYPPKGVSEKTIRDIRRMKARVDNERLPRGADRNTHTKLGRGGLTDIEWT VQLLQMMHAHEVPALHDPSTLRVLDALEDNEVIPVEQVQELREAWLLATDARNALVLVRG KRVDQLPAPGPQLAQVAGAAGWEPERNQQFLEHYLKVTRHARKIVDEVFWGEAESFEHD >gi|227860831|gb|ACLH01000089.1| GENE 32 33097 - 34434 1185 445 aa, chain - ## HITS:1 COG:Cgl2180 KEGG:ns NR:ns ## COG: Cgl2180 COG0174 # Protein_GI_number: 19553430 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 1 445 1 446 446 653 68.0 0 MNSQHEFVLRTVEERDIRFIRLWFTDILGALKSVVMSPSELESAFEEGVGFDGSSVEGFS RISEADTIAMPDPSTFQIMPFDKEEPELLSARMFCDITQPDGQPSLVDPRHILRRQVTEA ANEGFTCKASPEIEFYLLEDARDINKLVATDNGGYFDQATHDNAPSFRRRSMYALESMGI ATEFSHHETSPGQQEIDLRHADVLSMADHIMTFRYLIKEVASQQGVHATFMPKPFEDRSG SGMHTHLSLFEGDSNAFHDPDDEISLSSTGRQFIAGILEHAVEMTAITNQWTNSYKRLMF GSEAPGSVTWGISNRSALVRVPTYRLSKEMSRRVEIRSLDSAMNPYLGYAVLLAAGLRGI REGYELGDPAEDDVHQLTRRERRAMGYKDLPSSLDQALREFERSEFMAEVLGEHVFEYFL RSKWDEWHEYQQQITAFELRNNLNF >gi|227860831|gb|ACLH01000089.1| GENE 33 35113 - 35709 104 198 aa, chain + ## HITS:1 COG:no KEGG:cauri_1739 NR:ns ## KEGG: cauri_1739 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 198 178 375 375 342 99.0 4e-93 MVSTRIHINAPYINHKTTLLSVIADRNGCTALRLHPKGIVTVIGAEEDVRHVTDLFASLL RQCEWHMHHGEHAKSARQLGNVASFRRSFILSYATRIGELLEEANTKLDSHDVEGTGLAS NGPSTRQDEVTLAQQSLSAVEERRRNAEAVTDRIFPNARTVSLAVRSHAGVSAGASAAEK SHLGGDSSGLNGRRQLTR >gi|227860831|gb|ACLH01000089.1| GENE 34 35819 - 37546 1726 575 aa, chain + ## HITS:1 COG:no KEGG:cauri_1740 NR:ns ## KEGG: cauri_1740 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 575 1 575 575 1054 100.0 0 MSPKTFLEIEAKFAVDEATPMPDLTQLDEVSRVAETHHHSLSAIYYDTEDLRLTHAKITL RRRTGGNDDGWHIKIPGAEGRTEIRAELGEPIDGKYEVPDELLHQVRSVVRNQLLEPIAQ VDNNRTELLLVDADEQPVAEFCDDHVTAFSFLPGGSQSTWREWEVELAGDLPGSKAGNKL LRHATSLLIGSGARVSSSPSKLKSALGDSINNVELPPALAASNVEPGSPAAAVVEALKAN RDKLVEFDPRVRRDEWDSVHQMRVATRELRSHLQTFHGIVVGPEIERIESDLKELAAMLG VARDAEVVEERWQNLLASEDSDVLDEATREHIAHDMGRAYRRAHRRVIAALDSDQYLALL DALDAFLSNPPVAGEETAAGADGTSEDDIAEDSAVVASESAEPAEDHEAAQDYEPKHAKP DEGDEPRDLDTVMALHLKQAYDKLVKRHKKAVSNWDNTELTLHEREEYFHDMRKAAKKLR YAAEAAGSATNLKTKNLYKACKQMQSVLGDFQDSVTSRDKLLELAETARRRGEDTFGYGL LYQRERVIGLEALDAYSDSFKAIKSAFKPLRKKLS >gi|227860831|gb|ACLH01000089.1| GENE 35 37703 - 37903 356 66 aa, chain - ## HITS:1 COG:no KEGG:cauri_1741 NR:ns ## KEGG: cauri_1741 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 48 1 44 62 72 100.0 4e-12 MEKIMAEADNKWFYDPSTGEVSQGKVSGWENRMGPYDSREEAERAIEIAQARTAAADAED AAEDDY >gi|227860831|gb|ACLH01000089.1| GENE 36 38039 - 39310 1338 423 aa, chain + ## HITS:1 COG:Cgl2184 KEGG:ns NR:ns ## COG: Cgl2184 COG0153 # Protein_GI_number: 19553434 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Corynebacterium glutamicum # 17 419 29 428 431 291 46.0 1e-78 MPLWTAPSTPAVDRVRAAHRENVGAESAHVASAPATWALIGEHIDHYGGIAIMGLANIRA AAAVSPRSDGLVKVRLQHTNGETVEDQISLEQVSALAAQQQPSVDSEGQTIEPPAPEGAI AARLGGIIYTMINRQLLTRETAGADITVVNDIPDSTGLGAAAAIDIATALALLGTADDLH DAPLRARIAEVCSQAVGTFARFPALRARHSAALRGAGESITIIDYADGSVTQAPHMINKD IAAFALAVPGDADSAEAVTEIRARERFIDAACRAFGTPSLRLLPDAPQRVLEWLAAVHKV HGTENQPTIAQATAWLTFYSEETERAEGIARALRSRRGTELFPLLTQSQSALATVYGFNS AEKLAQLATARGAVASRSAHAGTSSAVIAYVPSAKATNFAADLAEDGLLVIPLSAGSPAI TED >gi|227860831|gb|ACLH01000089.1| GENE 37 39307 - 40710 1114 467 aa, chain - ## HITS:1 COG:Cgl2185 KEGG:ns NR:ns ## COG: Cgl2185 COG0557 # Protein_GI_number: 19553435 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Corynebacterium glutamicum # 1 467 7 475 475 551 61.0 1e-156 MKLYAAPLDFRPIAEEFSVPTDFPEEVTAQAATAQDRYAEQRRDARDIPLVTIDPAGSKD LDQAVFIEARDGGYRVLYAIADVAAFIEPGSALETESLKRGQTIYLPDEPARLHPAELSE DRASLLADVDRPAVLWTFNLDTAGEVEDFSVERALVRSRARLDYDQAHKDLENGTLHSSI ALLPEVGKLRQASSLRREAINLRLPSQRVTESSDGKKGHYELVMEPRHEVMDYNSEISLL TGMCAGRLMEEHGVGFLRTLSAATPEAEATFRSEAEALGFDLGESSISEFLHSVDADSPR GMAVMREAQRLLRGADYVWLEDGQADVHAGIGGYYAHVTAPLRRLVDRFATEVCLALSGG YEVPQWVCERAGDVMSTMRSTSQLASHVDKACLNLTEATVLAPWVGTNFEAVVVDGGIKR EKARLFVLDPPVIGQAVGHPETGKETMVSLVKADVEERDVLFAWPAD >gi|227860831|gb|ACLH01000089.1| GENE 38 41195 - 42364 1133 389 aa, chain - ## HITS:1 COG:Cgl2186_2 KEGG:ns NR:ns ## COG: Cgl2186_2 COG0406 # Protein_GI_number: 19553436 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 188 387 2 203 203 209 58.0 1e-53 MKLVIFADGGSRGNPGIAGSGTAVYNEDRSQLLREIAYVVGQKSTNNVAEYHGLLRGLEA AVELGADEVEFYMDSKLVVEQMNGRWKIKHPDMQKLAIEARRLLDQIPSFSLEWVPRAKN SVADALSNVAMDAAAKGDPAGILDMGSGDGAEADAADSQDASGEVGGTSASTASSTAADW RSECGPATRFILLRHGQTAMSAAKQYSGRANPELTELGKKQALAAAQALADTHIDAVVCS PLRRCQQTAAAVVKGRDLRVETVEDLIEVDFGRWEGKTFAEADAADPELHARWLKDTSVA CPGGESLRAVHRRVSAARRELQQRFEGQTVLVVSHVNPIKSFVRQALDSGPQTPNHLFLE LASVSEVEFFDGGSTLHRFNDVGHLGALR >gi|227860831|gb|ACLH01000089.1| GENE 39 42361 - 43077 1013 238 aa, chain - ## HITS:1 COG:Cgl2187 KEGG:ns NR:ns ## COG: Cgl2187 COG1579 # Protein_GI_number: 19553437 # Func_class: R General function prediction only # Function: Zn-ribbon protein, possibly nucleic acid-binding # Organism: Corynebacterium glutamicum # 1 234 1 235 239 206 55.0 3e-53 MKLPQDLQTILLELATLERSQALGGTPAIPEQEEYEKAQAAHARLVDASGSAQLAVDDME MEILRIQADERKLRQRERDDKAQLGAATDPETRKDLEHDLYAAKSRIADLMSELQEAHNE IHALRANLDVYGAKVSDSERKLEALKRAAEAAQEAVANRPDPQVRIGELREQLPADIVAE YETVREENGVGAAAFTGRACGGCFIVLPPAEQNAVRNAAADELPQCSDCGSYLVRPAS >gi|227860831|gb|ACLH01000089.1| GENE 40 43078 - 43926 865 282 aa, chain - ## HITS:1 COG:Cgl2188_1 KEGG:ns NR:ns ## COG: Cgl2188_1 COG0327 # Protein_GI_number: 19553438 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 6 123 5 122 123 185 77.0 1e-46 MAERTTVGEIRRVIHEAYPPQLAEPWDAVGLVCGDPADEVNTVAFALDCTQEVADKAVEL GAQMLVVHHPLLLRGVTSVAADTPKGKVIHTLIRNGVALLAAHTNADKARPGVNDKLAEL VGIKPGRPIVPVEPYENLDEALGLGRVGELEGPVTLREFTQRVADALPETEWGVRAAGDP ERLIKRVAVSSGSGDSFLDQVAELGVDVYVTSDLRHHPVDEHLRAAHLANPEGPAVVDTA HWASEFPWTTQARDIVEGALRVNTEIIDVRTDPWTISAHKEN >gi|227860831|gb|ACLH01000089.1| GENE 41 44029 - 44520 655 163 aa, chain + ## HITS:1 COG:Cgl2190 KEGG:ns NR:ns ## COG: Cgl2190 COG0394 # Protein_GI_number: 19553440 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Corynebacterium glutamicum # 10 159 1 150 157 179 57.0 2e-45 MTPPENDNQLHIVFVCTGNICRSPMAEIITRDAMETDMLDLLARVDSCGLGGWHVGQGAD ERAVAELRRGGHDGAGHQAAQLGEEHMDADLFVAMDTGHRDALLDRGIPQEKVRLMRSFD PNSPENASVEDPFYGTEEDFARTREEIDAAVPGLLEWIKTNHG >gi|227860831|gb|ACLH01000089.1| GENE 42 44552 - 45541 1206 329 aa, chain + ## HITS:1 COG:Cgl2191 KEGG:ns NR:ns ## COG: Cgl2191 COG3346 # Protein_GI_number: 19553441 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 15 329 1 288 288 282 49.0 6e-76 MLKTFLKPGWVLFLIFVVAFSYFSFTVLAPWQLNKDDQIVERNHLIEEAYEADPQPVTEV FSEDGSLHKEWERAEMTGHYLPEDEVLLRLRPVESAPGFQSLVPFETESGETFLVNRGWV PTDEGNSVPHIDPAPNDKVTIVGMARYNEREHTSAPIEEQGYTQVYSINTEQIAELVDVP LAHDYLQLSPDQPGELNALPVPKLDRGNHLSYGYQWIAFGVMAPLGFAYFVWSEIRERRR AREEEALMAEATAAAIGTGAGSPETGADTEAFEPDHEETSDKHPDATEPTAPTSTPAATT QPSRRSRSRYGSAKPDFYEKIRERGQERY >gi|227860831|gb|ACLH01000089.1| GENE 43 45828 - 46265 606 145 aa, chain - ## HITS:1 COG:no KEGG:cauri_1749 NR:ns ## KEGG: cauri_1749 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 145 25 169 169 259 100.0 3e-68 MTSTTSSEGTQRVTGFAAKLGIEEGQIALELGWDEDCDSTISESIEDVLGEDFLEEETDE LCDLVLLWWRAEDGDLVDGLVDATRPLGDSGRIWLLTPGAGKPGNLEPGEISESAQLAGL VQTKAERLGEWQGSCLVARGYTKKP >gi|227860831|gb|ACLH01000089.1| GENE 44 46439 - 49195 4288 918 aa, chain + ## HITS:1 COG:Cgl2195 KEGG:ns NR:ns ## COG: Cgl2195 COG2609 # Protein_GI_number: 19553445 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Corynebacterium glutamicum # 10 911 14 914 922 1460 78.0 0 MADLDAHNGDSNFPIVRDGVAAYLHDSDPEETREWMDSLDGLLDSSDPERARYLMLRLLE RATAKRVPLPSLTSSDFVNTIPTSLEPEFPGDEELEKRYRRWIRWNAAIMVHRAQRPGIG VGGHISTYAGAAPLYEVGLNHFFKGKDDPSGGDQVFFQGHASPGVYARAFMEGRLSEEDL DGFRQEHSRGEGNGLPSYPHPRLMPDFWEFPTVSMGLGPINAIYQARFNKYLETRGIKDT SKQHVWAFLGDGEMDEPESRGLLQMASLYELDNLTFVVNCNLQRLDGPVRGNTQIIQELE SFFRGAGWSVIKIVWGRGWDKLLEADKDGALVNIMNTTSDGDYQTFKANDGAYVREHFFG RDERTLKLVEDMSDDEIWALRRGGHDYRKIYAAYDKALSYAGTGRPTVILAHTIKGYGLG HNFEGRNATHQMKKLTLEDLKLFRDKQGIPISDEQLEADPYLPPYYHPGKDAPEIKYMLE RRKELGGFLPERRENFETLTTPDLSKLRSVRKGSGKQDVATTMALVRTFKELMRDKELGK RVVPIIPDEARTFGMDSWFPTLKIWNPRGQNYVPVDHDLMLSYREATDGQILHEGISEAG AAASFTAAATSYATQGEAMIPLYIFYSMFGFQRTGDAFWAAADQLGRGFIIGATAGRTTL TGEGLQHMDGHSPILASTNPAVEVYDPAFGYEIAHLVPRGIERMYGEDNEPIMYYITVYN EPVKQPAEPENLDVEGLHKGIYHYNTAESGSIPANILASGVGMYEALRAQEILAEDFDVK ASLFSVTSWVKLARDGAARNQEALRKGTEPTEAFATSQLKGFEGPFVGVSDFATDLQEQI RPYVPGDYIVLGADGFGFSDTREGARRYFNIDAESIVVGVLEGLAREGKVERSTVEKAAR ELKLDDPTATTSTSSDED >gi|227860831|gb|ACLH01000089.1| GENE 45 49457 - 50473 875 338 aa, chain - ## HITS:1 COG:Cgl2201 KEGG:ns NR:ns ## COG: Cgl2201 COG0596 # Protein_GI_number: 19553451 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 40 332 23 317 320 229 40.0 4e-60 MVIRARSSAIARSWSRRARPRMRAVERTVHNDLHDLTTEPGLTGVSNSGFVDNDGVRVAW YEVGPEDAEVTAVFIHGYCLSAESFYSQVNDVRRNYPTVRCLLVDVRGHGQSTHVAPAQC TVRSAADDVLAVIAERAAEGPLVLLGHSMGGMIALNLLRCAPRDVFERVEGMALVATSMQ RFAAAGVARLLESKTLGMVYHACLKLPNRLNRVRFEAAALIAPAFAALLQGFPQMDKLQF HVAMLLDTPMSSYAGFFDDLVEHSEFGATARLRSVPGEIVVGQHDIVTPRRQSEVIARHW PDSTLTVIDGAGHMVILEEPSEVSKALGRVLDRVLGGN >gi|227860831|gb|ACLH01000089.1| GENE 46 50500 - 50802 424 100 aa, chain + ## HITS:1 COG:no KEGG:cauri_1752 NR:ns ## KEGG: cauri_1752 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 100 1 100 100 142 100.0 4e-33 MANDLSAQLQARFGSTPAEEKDSAPAGDAYSELTRLITKVTGVEEGLEREATLEDLGVES LERIELAVRLEEACGVRLNEETMLSVTTVGELAEYLEEHS >gi|227860831|gb|ACLH01000089.1| GENE 47 50799 - 51578 1133 259 aa, chain + ## HITS:1 COG:Cgl2203 KEGG:ns NR:ns ## COG: Cgl2203 COG0647 # Protein_GI_number: 19553453 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 2 259 5 262 275 395 78.0 1e-110 MISYLSDMDGVLIKEGEMIPGADTFIQALKDNNIEYMVLTNNSMSTPRDLSARLKNTGLD IPAERIWTSATATAAFLSNQAGLSTAYVVGESGLTTALHEAGWILNDRDADFVVLGETRT YSFEAITTAINLIRNGARFIATNPDVTGPAPQGVLPATGAVAALITAATNREPYYVGKPN PVMMRSALNNIGAHSENTVMIGDRMDTDVKSGLEAGMRSILVRSGISDDRIIERYPFRPT RIIDSVADLPERIFDPFVD >gi|227860831|gb|ACLH01000089.1| GENE 48 51582 - 52031 242 149 aa, chain - ## HITS:1 COG:no KEGG:cauri_1754 NR:ns ## KEGG: cauri_1754 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 149 1 149 149 263 100.0 2e-69 MNQRVHPQLAGAAAPAASVNPLGSPADTWPNRACGEVCTVVLEISGMPRSLRPAIERAMA RCIRSESEFIVPGDDPLTAQWCTRWRRDSVWDPMSGRATGSAAADNAGCAGIGCQQVLTG TPSELEALGRAVEMLAGEYGFRGVVKRAV >gi|227860831|gb|ACLH01000089.1| GENE 49 52431 - 53234 782 267 aa, chain - ## HITS:1 COG:Cgl2206 KEGG:ns NR:ns ## COG: Cgl2206 COG1680 # Protein_GI_number: 19553456 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Corynebacterium glutamicum # 1 263 1 266 269 261 54.0 1e-69 MSAFSSLESWPVDTVAAALLHRGEVVEQLGDTSRRFPVASVTKLVAAYGVMVAVEEGAVE LDQPAGPEGSTLRHLLAHASGVGFDTREQQKPVGERRIYSSAGYEWAAEEVEKATEIPFS EYLAEGVCAPLGMRATTLEGSAGHGLVSSVEDLAAFAAEVYSPSLLDPSTVEEMRSVQFP GLRGIVPGYGSFKDCTWGLGFEIHGEKQQWMGGLPADTVGHFGMSGTYLWVAGDWAMVAL TDRDFGEWCKPLWAESNTAIWEECQAR >gi|227860831|gb|ACLH01000089.1| GENE 50 53245 - 53892 425 215 aa, chain - ## HITS:1 COG:no KEGG:cauri_1756 NR:ns ## KEGG: cauri_1756 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 215 1 215 215 205 100.0 1e-51 MTKFSRAVLAASVSVSLCLSAVVPAQAESTVQGVEVPSVDSSAADAGADLSSEQDAASSI EDAESSDQSSASSSEEDDAEFQQSSQGEKIALGVGISAAILAALAGGVYWAVQQRIIPNP LPGLIPSPPAPAPAPAPAPQPAPAPAPAPAPAPAPAPKPASKPAPAPAPQPAPASFTRCA DVWNALGRPIYAGEPGFRSKFDRDGDGVGCERDPR >gi|227860831|gb|ACLH01000089.1| GENE 51 54167 - 55765 1558 532 aa, chain - ## HITS:1 COG:Cgl1240_1 KEGG:ns NR:ns ## COG: Cgl1240_1 COG0668 # Protein_GI_number: 19552490 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Corynebacterium glutamicum # 2 271 7 279 279 257 49.0 3e-68 MLKYYMFTIWQAIVDHGLPLLGMLLLGILIPRIGRLAVRVIESRLDENQESTKARLALAG ALVYVAQAVAYFLLVLAALSNLGVPPLGAAIPATVVSAAVGFGAQSIIGDFLAGFFILSE KQFGVGDYVSFDGVTGVEGTVVSLTLRTTTVRTPTGEVVMVPNGSAGVVTNFSQEWSRAV VDIAIPVHEGDSLPEITEQVEKISQHALDAPEIRADVAGELDVLPATGLTAPTAAGQPWQ VQYRVLVQVNPARQWAVERAIRSALLSSFWDLYKLPTAEGLPGDAPQVLDDAPDADPLDA STPTTVMPAAGTDSSSQHSATSDSAAEAQTEVIATEAVADAAEEPEESMHDGPGRPAFSD ESEDEEEDDYKGGIWRADKPENKWQYFWTLGGRVRASTTGLIAGLGVVGLLLLSSANPDG VDAGWLSPSRWMGDSEAASESAEPSEPSVAPNTTPQDELVTDSTGQEPTDAGQPATPTDS APDSEATYVPADPQAPATQTPAEQYSETAAPTANEQPTVNATEGAAEPSTVM >gi|227860831|gb|ACLH01000089.1| GENE 52 55809 - 57371 1431 520 aa, chain - ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 35 519 49 533 534 418 43.0 1e-116 MLAVSGAVAPTVVGCTSEPGSVDTSGLDLITTDISEPQRTLIPADSNDVPGQTIINLVYS GLVYLDEDGDTHYDMAESITQVDDTTYDVVIREDAIFSDGSNVTAKDFVDTWNTAVSQSL LSAHQFEPILGFHEGQKTMRGLTVTGQESFRIELSRPTAGFLERLGYSAFFPMRSEDKDK LSERGMEPIGSGPYMLASWEREKAVTLVPNPRYTGPRKPHNEGIKFVVYSSEEQAYKDLV EGRLDVLTRIPSERLGSFEKELGERALTTPGGSIMEITIPANDANFRGEAGRLRRRALSM AVDREEIAREVFHDRVLPATSFVAPLFGSTPPAPEGADVLTYQPEEARELWEEAEKLDPF EGTFSIGYNADGGHKTWIDAVAKQLRDTLGIPAEGQEFATLKELRKEVTARHITGAFRTI WQAEFPEESTFLVPLYASFSSENESGFSSREYDKLLEKAGQVQDHEEAQKYYTEAQSLLL EKMPAIPLWTTKAYTAYSADIVPAGFTWKPTPNYYLIHRA >gi|227860831|gb|ACLH01000089.1| GENE 53 57446 - 58519 1121 357 aa, chain - ## HITS:1 COG:Cgl0134 KEGG:ns NR:ns ## COG: Cgl0134 COG2860 # Protein_GI_number: 19551384 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 234 3 236 239 219 46.0 6e-57 MSVVEMDPLIESLYYWSDIIGVLLMGMIGGTMARQRGYDIVGFFFIAMFSSLGGGMIRDV LINRGTVAAMSQPEYLYLAFTGAIIARFVYFKGKTWDYVQSHGDAVVSALWASTGALKAI AYGLPLIPCIMMGVFTATGGSMIRDIAMGREPAVFGDNTPTVIPAVACALVVLGADSAGY LAWGVILGPVVSFVMTMLGIWAGWRVPARQEWAPVNDTAAYVMVMARKAESKGRAVGRRL EPTKLRSWRHNQMEKALQRRIEREVRAGKRRAEAAIDANEFLDSFNEEVAEMSEMMEPAT AEAETPDFGVDLSGDSYETPSADEPSPRELLDRILADDQLTDELVERLMRRYEKRDE >gi|227860831|gb|ACLH01000089.1| GENE 54 58861 - 59286 385 141 aa, chain - ## HITS:1 COG:no KEGG:cauri_1767 NR:ns ## KEGG: cauri_1767 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 120 1 120 141 166 70.0 4e-40 MGGDSTELLVCFGLVIVMALYWTYYIRGVRKTPRSERWYDTADSEGAESDGVLFIYPYGT LIMGAAGATGLVANMGLPEPVETVLFIPLIAAFIIGAIGFTGAFGIPLPWPFVPRWVVDI RKAKRARRRERRQARKMKKKD >gi|227860831|gb|ACLH01000089.1| GENE 55 59426 - 60760 1445 444 aa, chain + ## HITS:1 COG:FN1198 KEGG:ns NR:ns ## COG: FN1198 COG1106 # Protein_GI_number: 19704533 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Fusobacterium nucleatum # 297 408 278 385 420 61 34.0 3e-09 MRLLSFSVSNFRSIRATQTLSLYHHWQHSTAPEEGWAQVSEPTTVLIGPTASGKSSVLNA LAFALLAIESSATTWLADAPPNQLPHAPYRLDPRTQRLPSTFELDFELDGVRYLYGFQWS FTGVHAEWLSRVPSTRWSPCFVRTRGEEVQWTRSFMDTGDVAKLGPVTDTELILSAGLRD GHPVLAPLARALVHDVAYLPHGHSSISTSSRITTLIRTGKLHLHEAAALLRAADSGIHSV RLNQDHIPEHVFRQMRPVINALSRSNARLRRPDEFSAYSDAEIESLLHAIIVEHKVGDSY YSLKLTDESGGTQNWMATAPLVLDTLRRGGILVADELDSALRPALLDFIIQAFREPSINV NGAQLIFASHTFSALERAGELGLRPESFWSVEKTAAGESELHNLSNTSISLDNPDATHRF LRERYGTASREALTALRELVTDGA >gi|227860831|gb|ACLH01000089.1| GENE 56 60790 - 61224 217 144 aa, chain - ## HITS:1 COG:no KEGG:KRH_22810 NR:ns ## KEGG: KRH_22810 # Name: not_defined # Def: hypothetical protein # Organism: K.rhizophila # Pathway: not_defined # 9 144 26 160 163 101 47.0 1e-20 MTSSTPINDRLMIEETTLEELKSLQSLETASIRVADEHGRPVPLSSDVQRLISQVLTSVA QRGEVTISRIPEELTSTVAAELLGVSRPTLMKWAREGKIATHKRGTHTRFKREDVLQLKR QRAEERVKAFQEWRAFEEENAHLF >gi|227860831|gb|ACLH01000089.1| GENE 57 61513 - 61746 210 77 aa, chain + ## HITS:1 COG:no KEGG:cauri_1762 NR:ns ## KEGG: cauri_1762 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 77 12 88 88 120 98.0 2e-26 MSEFIIIYKRRSGESFIKQFSDSAQALKERLRREAAIDDPDIEIAHISAPSLESLKKSHS RYFMGRVEVQDDQVDAA >gi|227860831|gb|ACLH01000089.1| GENE 58 61884 - 63054 966 390 aa, chain + ## HITS:1 COG:no KEGG:cauri_1763 NR:ns ## KEGG: cauri_1763 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 390 1 390 490 699 100.0 0 MSVEARALSLRRLMRDSAAIRLLAADNAPVILALIAEYFPRGTRARPAAEVYELMVTDFE VLASEFSMPRTPQNYCNDWVKAGWLIRKSGKSSHGETLEPSEDALSALEAIERWEAPVTA VTASRVESISSALQRLARDTNEDIASRVASLEAERDRIDREIEKAHLGQFESLTAAETEE RVQDVLNMAMAVPSDFARVRHELEALNHQLRRQLLDPEGYRGEVLEEIFNGVDHIAESEA GRSFRGFYSLLMDRERNAWLDQWIKEVLESEPGQQLAPDRRQRLRSLFRDMEETSFEVNQ TMTGLARSLRNYVSSEQFAEDRRMIELLREARGMAIDAAQNSELKAFHRMDTPLQRIGMS IHSVSRIRLANPGREVVEETPVAYHPGTED Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:02:57 2011 Seq name: gi|227860830|gb|ACLH01000090.1| Corynebacterium aurimucosum ATCC 700975 contig00171, whole genome shotgun sequence Length of sequence - 18677 bp Number of predicted genes - 19, with homology - 16 Number of transcription units - 14, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 298 - 978 778 ## cauri_1764 hypothetical protein 3 1 Op 3 3/0.000 + CDS 971 - 4363 3321 ## COG4913 Uncharacterized protein conserved in bacteria 4 1 Op 4 . + CDS 4350 - 5486 1051 ## COG4924 Uncharacterized protein conserved in bacteria 5 2 Tu 1 . - CDS 5536 - 5961 192 ## cauri_1767 hypothetical protein 6 3 Tu 1 . - CDS 6400 - 7302 107 ## cauri_1768 hypothetical protein - Prom 7344 - 7403 1.5 7 4 Tu 1 . + CDS 7715 - 8047 179 ## gi|262184586|ref|ZP_06044007.1| hypothetical protein CaurA7_11382 - Term 8061 - 8118 9.5 8 5 Tu 1 . - CDS 8138 - 8338 177 ## cauri_1769 hypothetical protein 9 6 Tu 1 . + CDS 8470 - 8769 456 ## cauri_1770 hypothetical protein - Term 8848 - 8878 -0.6 10 7 Tu 1 . - CDS 8881 - 9288 306 ## cauri_1771 hypothetical protein 11 8 Tu 1 . - CDS 9934 - 10179 57 ## - Prom 10313 - 10372 2.4 12 9 Tu 1 . + CDS 10733 - 13225 1552 ## COG1061 DNA or RNA helicases of superfamily II + Term 13432 - 13473 1.6 - Term 13208 - 13243 -1.0 13 10 Tu 1 . - CDS 13419 - 14390 408 ## cauri_1773 hypothetical protein - Prom 14483 - 14542 3.8 14 11 Op 1 . - CDS 14626 - 14916 179 ## cauri_1774 putative transposase 15 11 Op 2 . - CDS 14921 - 15073 96 ## 16 11 Op 3 . - CDS 15000 - 15500 298 ## cauri_1775 putative transposase 17 12 Tu 1 . - CDS 15871 - 16611 365 ## COG1349 Transcriptional regulators of sugar metabolism 18 13 Tu 1 . + CDS 16882 - 17052 220 ## - Term 17715 - 17749 0.3 19 14 Tu 1 . - CDS 17990 - 18430 156 ## cauri_1778 putative secreted protein Predicted protein(s) >gi|227860830|gb|ACLH01000090.1| GENE 1 20 - 301 289 93 aa, chain + ## HITS:1 COG:no KEGG:cauri_1763 NR:ns ## KEGG: cauri_1763 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 93 398 490 490 187 98.0 1e-46 MRESEIDFEELHEAVRMAVAKSGPCTIGQVLQAHPPTQGLASVVGLVHIADSHPLPSLKE GHETVTWTEEDGTVRCAQIPTMYFDHTTVKELQ >gi|227860830|gb|ACLH01000090.1| GENE 2 298 - 978 778 226 aa, chain + ## HITS:1 COG:no KEGG:cauri_1764 NR:ns ## KEGG: cauri_1764 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 226 1 226 226 403 100.0 1e-111 MTAANNPRVDAAHEPPLWEHDKGTLTYHSRRALVQLLQGPLIRAQKEPVLWAAIISDEEN LRARLHEVFLELVVDETEGFAFTRMVEEDSLSIPQVLRTDKLKHIDTAILLNLRQELGLT LPGERVIVDVEDLRESIGYVRAVDNRDEAGFTKRFNAAMKRIQNDYSLISATETEGRFEV SPVLRQLFDASTVSAIRDEYARLAQAEDQDEQEPEQMQLQEDASDD >gi|227860830|gb|ACLH01000090.1| GENE 3 971 - 4363 3321 1130 aa, chain + ## HITS:1 COG:Cgl2744 KEGG:ns NR:ns ## COG: Cgl2744 COG4913 # Protein_GI_number: 19553994 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 8 1110 11 1110 1111 764 42.0 0 MTKNTTYYPGQFRISRIQLINWGTFHGYFSIPVARKGFLITGGSGSGKSTLLDAMSAVLV PQSHVKFNAASQQDLGRHNGRNLVSYVRGAWRQRENTQTGEIAPEYLREGATNSVVALTY DNGAGKQHTLIAIFRLNGGENSVGQIKKLYGLVPGDEDIDKLSPLLTRSLDTRKIKAMYK GPGASFTPTYTTFADRFRKRLGIKNVEGQLLLHRTQSAKSLSSLDQLFRDYMLDGPATFE KADEAVEQFEDLRQAYLRVEDVKAQIDTLAPLPQLHSQRTGAEADKAQAEAMAEALPAVR ARLVAEELDVRIRALSAQLAEAQSQAASLEADVAHLDDAERLAAVAVSQLSSGELDALRA KIETAEKEIEHRTKEFQRLSAAAGQWTDHYELSPHGFAQLQANAKIRIADFEADFEDLIN QQQEAGVAARDAATACSTLDSELRSFSSRRTNIDKSLVELRSQLARDTGYAESELPFAGE LIDISPHQSEWEPVIQKLLHNFAATLLVPEAAREAINQWVNSRNVGTRLEYRTIPEFAPA PAAARSPRQLIHKLEFQDHAMASWVRHHISRRFNYECVDSVAELEKVTKAPAITRDGLES RPKDKDGSTRFIKDDRTRFNGTAWYRVGSTNTAKIELLRSHLTEAKATARATAKQVQDLN RKMDILRSQRDKAQQVLDTSFQDIDTASAEARRRDLQEQFDSLASSPEAQALAAAHTQAK QKLNAARTKLNEAQKHLGNVEGELERSTTRRRGIGPVPEIADKEIETAVVEALHKGKRSL TIDDIDARRDEVQASLQQTSRTAARRIEEANDKIVSVLHAYLSQWPAEAADLEPQASFAG EGIEKLKFLRADRLADFRARFLELLNGQTVRNLSHLATDLRRARSDIEMRMEYINKSLER SPFNGERTLRIDVKDARGQVVQEFQRDLDAATSHSLGEIGSDDSEAALARYHALDKILSR LGSSQPEDLRWRNVVLDTRRHVSFIGRELYPDGTTANTYQDSASLSGGQAQKLVFFCLAA ALRFRLAEPDQDVPTYGSIILDEAFDRADPTFTRTAMSVFTSFGFHMILATPFKLIQTLS PYVDGTIVVNYDEPTIDGRPQARSGYKLIDASTTHDPQQPDPKDSDDADS >gi|227860830|gb|ACLH01000090.1| GENE 4 4350 - 5486 1051 378 aa, chain + ## HITS:1 COG:Cgl2743 KEGG:ns NR:ns ## COG: Cgl2743 COG4924 # Protein_GI_number: 19553993 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 6 362 7 353 368 197 39.0 4e-50 MRTPKDLQAHAAKYLRNHFAEALAEPAALNLDWPLHPPTATSAAHDITATKDFIRAWQRW PHQEEVIYESRNWSRAGLGTNDVPTRAILTGAARIAAAAGLMPDYNRALQRAQDIAAIFP DTPEFAHTVHRSYNQWKDLSAYDLRCLGPCLTWLRANPHSGEWERAVPVEGVDGKWIGNH RRLLLTLLAPFGITDLGLRRSDARLRLRYLNHAPALSEIEIPLADAVKLFPDAPPRVLIV ENKQTFLALPTLADASPTTIALLGSGTAAHQLQALDWLHRTDITYWGDLDAAGFAILNAV RAHFPHTTSLLMDPATVTAFQHLAVPDPGDGSATLTHLTTEEQRAYRLLFTAGRLRIEQE RIPFAHVNAVIHATLAAA >gi|227860830|gb|ACLH01000090.1| GENE 5 5536 - 5961 192 141 aa, chain - ## HITS:1 COG:no KEGG:cauri_1767 NR:ns ## KEGG: cauri_1767 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 120 1 120 141 237 100.0 1e-61 MDGDITELLLYAGLVLVMVLYWAYYIRHVRRQPRSEKWYDDVDFVGAESDGVLFIYPYCS LIMGTAGAMGLVASANPPEFVYMVLKVPFAAAFVIGVIGFTGAVGVSLPWPFVPRWVVDI RKAKRARRRERRQARKREKEE >gi|227860830|gb|ACLH01000090.1| GENE 6 6400 - 7302 107 300 aa, chain - ## HITS:1 COG:no KEGG:cauri_1768 NR:ns ## KEGG: cauri_1768 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 300 75 374 374 572 100.0 1e-162 MVNSLPESNVPDVRDYLFVDRQRVGSLLAQFADGLPESETQSKSRSKRLSANLAKIFSGQ SEVGQSEAQTLALADLHVSQLEEAAQALDMLADISDLMANRKKWLRGKVRSRLQPGMLLR VTAMTQISDIATILELMSKLDQNFGSGSENAFEAMLDQIRSLYGESITVSIWPNGDDAND GMFVGELPYDLGFGPTRRELILSQVGPGPAELTTLMQISAVPTEKDKNHALGTWISELAS MATKAVENDQLDRRVLDKTIASLGLVLAHSGFVAAPKWPAISVLPLAIYRNVMPTPQLDV >gi|227860830|gb|ACLH01000090.1| GENE 7 7715 - 8047 179 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262184586|ref|ZP_06044007.1| ## NR: gi|262184586|ref|ZP_06044007.1| hypothetical protein CaurA7_11382 [Corynebacterium aurimucosum ATCC 700975] # 1 110 117 226 226 229 99.0 4e-59 MFAERVFSTWVPGYQVDVAYWIQPKGKLIENQEMVDSAEGVPAVQFVVLEYKDELGNQYS EEYELNAHGALCLDFRTETSTINNEFDFKKQLSKDLQANAHMLGRISRKL >gi|227860830|gb|ACLH01000090.1| GENE 8 8138 - 8338 177 66 aa, chain - ## HITS:1 COG:no KEGG:cauri_1769 NR:ns ## KEGG: cauri_1769 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 11 66 1 56 56 99 100.0 4e-20 MTTKFLTPPNMVGDVGFRDAVGRVVYVDAEELDAELLEVLRDPARLAECNDARQSEQFLL VPLSLA >gi|227860830|gb|ACLH01000090.1| GENE 9 8470 - 8769 456 99 aa, chain + ## HITS:1 COG:no KEGG:cauri_1770 NR:ns ## KEGG: cauri_1770 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 99 47 145 145 189 100.0 4e-47 MSTTQDRDPDLKVSLSRHNESVIRNRFATASIAVDIAISVVFIIGSVLFLFSLTKIDTVF FLLGRLAMAARPAIRLRRRMYLQRIGADREDADEEGSYY >gi|227860830|gb|ACLH01000090.1| GENE 10 8881 - 9288 306 135 aa, chain - ## HITS:1 COG:no KEGG:cauri_1771 NR:ns ## KEGG: cauri_1771 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 135 1 135 135 248 100.0 4e-65 MGEGTELIISESYSVAKVSAEAKNFSNDGEEIPINVTMTFGVHLADDALGLEVCVNRTGD DADIIAAVRGVYMLSEPATQEQQLEILSSWAGPRTLAATQLKLNELAASIDRAVVPFPKD MESAFAPEAFAEFFG >gi|227860830|gb|ACLH01000090.1| GENE 11 9934 - 10179 57 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLRLICMMSFSIERFNMAFRLLTMRRLVVDVGAIVVRWGKEHCVVGVQQVGKSRGAEKF VFKEALSTKKTEFSGDPISMI >gi|227860830|gb|ACLH01000090.1| GENE 12 10733 - 13225 1552 830 aa, chain + ## HITS:1 COG:Cgl1533_2 KEGG:ns NR:ns ## COG: Cgl1533_2 COG1061 # Protein_GI_number: 19552783 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 415 803 1 403 405 316 45.0 1e-85 MTASRSPQTSSPNNTELDALRLRVEGLERALLALAGVSSIEKLLEQHAIPDAPINLAQPT ESLPDVSVSPTPAARTRVPGEVTKDSPTTDKMALYMSRFRGREDIHAFAWTSKDGQKKAW FPATRHAKFKDDPSPENLRPLDASVITKHLTRTEFFAGLYPLLPDDTCYLLACDFDDGDF QQDALAYAEQCRAHGLDPLIELSRSGTGAHVWIFFETAVPAQLTRQVGLGLLASSPRPVK FSSYDRFFPAQDRLPVNARGQAQLGNLIALPLQGNHRQNGTTVFVDDDFHPFDDQFAVLS RTRLATQQQLQKIRDGLYSDNDPEQLPSPPRKHQLKQVAKTNKAKSSADTKVSVTHDSLV HIATANLDTTTLNALRHLGVFPNPEFYKLQNQRFSTWGKPRVIVRYQEDASPHGKHELRL DRGLLEPAIDILKEAGYTVTRRGHTPKPQKIDATFTGELTPPQKKALNDITAHHTGVLVA PPGTGKTVIACALIAQRRVPTAVIVRTRELAAQWHDRLTRFLDATPGTKAKPTHVVDIIS ATAIGRKDTDASFLEQYGQVIVDECHGVAAPGLTAALSELNIRYWTGLTATPYRSDGLDP LITMLLGPIRHTIAPQHTTRREYHPHLTEFTHEILGRVDMTEIYNALAADADRNTQILTV TAATAQAGHNVLVLSNRRAHVAALTEELRNQLPNTDVFSLTGGLTPAERHDLHAQLDASE HFVLVAMDKVAGEGFDLPTLDALVLASPISFKGNIIQRIGRVTRGATNTAATVHDFNDYN CPPLAKMFKRRQRVIKNEGFDITPVTGTPDTALPLSLADASSPQHRSKQP >gi|227860830|gb|ACLH01000090.1| GENE 13 13419 - 14390 408 323 aa, chain - ## HITS:1 COG:no KEGG:cauri_1773 NR:ns ## KEGG: cauri_1773 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 323 31 353 353 672 100.0 0 MLIAYLDEFGHQGPYIRHDHPKFNTHPCFGYAGYILPAENVRKMGGYFKYIKENLLAWEL SQSEVPADRWEKKGSALLTSNNFRNYEDEIVPALRRIYGKLGQLEGQLFFYGQQKPVGPV SETHETSQDRESHCLIQAINRLGTIAHDRNEKMLVIMDATDTDNRERAVATLGATIYTRN NSTNKSIIEVPLQTESHLYNTVQLADWTCALLGRLTDYHFAEYSDFSWAVDVGRDIFNRA KPTENSIIWSNATSMHSRCFPNGLVVAQRFWEKEQRKQARDARKKEKNSQMFQRLIDAGS DELKAKLEQIRHGSPDTSDDRKP >gi|227860830|gb|ACLH01000090.1| GENE 14 14626 - 14916 179 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_1774 NR:ns ## KEGG: cauri_1774 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 96 1 96 96 165 100.0 7e-40 MEELGLTAKYRRAFKRTTIADPNAKVRGDLVKRQFNPPVPTTGLCGDITYLRISQGWMYL ATVIDPRRRRPRHDASALADRKESAIAQTARKNLKT >gi|227860830|gb|ACLH01000090.1| GENE 15 14921 - 15073 96 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAPVPAANATGSFGLITEIFASHNGFAGARTIHAELRKQGIDLKLVWRA >gi|227860830|gb|ACLH01000090.1| GENE 16 15000 - 15500 298 166 aa, chain - ## HITS:1 COG:no KEGG:cauri_1775 NR:ns ## KEGG: cauri_1775 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 166 1 166 166 307 100.0 1e-82 MPSAYSEQFKQQCVDTVLVLGKSRAEVAAEYEVSASALGRWVAKAQGTEGTGSGSHMRKA DPASQDPTELAKRVRELEIENEFLKSGRPLRQGPLEGDIFKVIEHFDEEGAGKPRYTVTM MARGLGVTRVGYYVWKHRRSRPYAGASPRGKRHRLFRAYHRDFRLA >gi|227860830|gb|ACLH01000090.1| GENE 17 15871 - 16611 365 246 aa, chain - ## HITS:1 COG:Cgl0107 KEGG:ns NR:ns ## COG: Cgl0107 COG1349 # Protein_GI_number: 19551357 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 244 11 254 260 329 75.0 3e-90 MRAIDRPGETRIRNLAELTGVAAVTIRRDLAELEELGLLVRTHGGARRVERRGTPKPFRV RQAEDPEAKAAIARAASELIGDDDAVIFDNGTTAQAIAQRLAGRPITAMCLSLHSAAALG VKPGANIFVPGGEVEPDTLALSSVAVASALREFRADVVVLGSCSTSLEHGLATTTYDDAE NKRAAMRAATRRILAVAPRKLNHVSTFRFGDIEDLHQLVTTTDAPAEILAQIRELGVHVI TVPAGK >gi|227860830|gb|ACLH01000090.1| GENE 18 16882 - 17052 220 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTPRTDASPRTTRRTNYRRASSTQTLARLREWFHDTRLERTGTVTFTLITGATESR >gi|227860830|gb|ACLH01000090.1| GENE 19 17990 - 18430 156 146 aa, chain - ## HITS:1 COG:no KEGG:cauri_1778 NR:ns ## KEGG: cauri_1778 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 1 146 146 184 100.0 8e-46 MKTALKVVGALVVLGMIGSACEDNTDETAPVTTTSTELTTNTTVTSTKAVESTVTKTEAA APTTEQADSVALSDIDSLPAGVAESDPVVQQQGFAALPQQQQVQSTSTFYKNCAAARAAG AAPIYSGQPGYGSHLDRDGDGVGCEK Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:04:04 2011 Seq name: gi|227860829|gb|ACLH01000091.1| Corynebacterium aurimucosum ATCC 700975 contig00172, whole genome shotgun sequence Length of sequence - 40970 bp Number of predicted genes - 42, with homology - 37 Number of transcription units - 21, operones - 12 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 6 - 58 -0.5 1 1 Op 1 . - CDS 71 - 340 150 ## gi|262184601|ref|ZP_06044022.1| hypothetical protein CaurA7_11457 2 1 Op 2 . - CDS 342 - 542 143 ## cauri_1781 hypothetical protein 3 2 Tu 1 . + CDS 1105 - 2400 772 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase + Term 2626 - 2663 -0.4 4 3 Tu 1 . + CDS 3326 - 4381 61 ## cauri_1783 hypothetical protein + Term 4480 - 4521 10.4 5 4 Op 1 26/0.000 - CDS 4510 - 5208 122 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 6 4 Op 2 . - CDS 5336 - 6247 418 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component - Prom 6303 - 6362 3.6 - Term 6260 - 6301 1.7 7 5 Tu 1 . - CDS 6369 - 7157 27 ## cauri_1784 polypeptide N-acetylgalactosaminyltransferase (EC:2.4.1.41) - Prom 7214 - 7273 4.0 - Term 7531 - 7581 -0.8 8 6 Op 1 . - CDS 7682 - 8536 168 ## BACI_c52650 hypothetical protein 9 6 Op 2 . - CDS 8545 - 9330 95 ## gi|262184609|ref|ZP_06044030.1| hypothetical protein CaurA7_11497 10 6 Op 3 . - CDS 9340 - 10092 250 ## COG0438 Glycosyltransferase - Prom 10209 - 10268 1.7 + Prom 10402 - 10461 2.3 11 7 Tu 1 . + CDS 10579 - 10818 109 ## 12 8 Op 1 25/0.000 - CDS 10807 - 12357 477 ## COG0438 Glycosyltransferase 13 8 Op 2 . - CDS 12357 - 12941 95 ## COG0438 Glycosyltransferase - Term 13453 - 13502 -0.5 14 9 Tu 1 . - CDS 13716 - 13862 60 ## - Prom 13885 - 13944 79.3 + TRNA 13867 - 13942 81.1 # Asn GTT 0 0 - Term 13935 - 13967 3.9 15 10 Op 1 . - CDS 14053 - 14715 434 ## cauri_1788 hypothetical protein 16 10 Op 2 . - CDS 14791 - 15948 1424 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 17 10 Op 3 . - CDS 16041 - 16223 149 ## 18 11 Op 1 . + CDS 16209 - 16403 146 ## 19 11 Op 2 . + CDS 16400 - 16684 466 ## cauri_1790 hypothetical protein + Term 16753 - 16794 -0.7 20 12 Tu 1 . - CDS 16693 - 18621 2538 ## COG0358 DNA primase (bacterial type) 21 13 Op 1 . + CDS 18778 - 19284 540 ## COG4290 Guanyl-specific ribonuclease Sa 22 13 Op 2 . + CDS 19288 - 19521 296 ## cauri_1793 hypothetical protein + Term 19554 - 19597 4.1 23 14 Tu 1 . - CDS 19567 - 22863 4052 ## COG1409 Predicted phosphohydrolases 24 15 Op 1 . - CDS 23099 - 24373 1738 ## COG0232 dGTP triphosphohydrolase 25 15 Op 2 . - CDS 24385 - 24969 624 ## COG1434 Uncharacterized conserved protein 26 16 Tu 1 . + CDS 25014 - 27062 2332 ## cauri_1796 hypothetical protein + Term 27272 - 27307 0.6 - Term 27456 - 27507 -0.5 27 17 Op 1 . - CDS 27616 - 28044 494 ## cauri_1797 hypothetical protein 28 17 Op 2 . - CDS 28044 - 28562 558 ## cauri_1798 putative secreted protein 29 17 Op 3 . - CDS 28562 - 29941 2052 ## COG0423 Glycyl-tRNA synthetase (class II) 30 17 Op 4 . - CDS 29975 - 30217 80 ## + Prom 30024 - 30083 4.7 31 18 Op 1 4/0.000 + CDS 30123 - 30431 258 ## COG0640 Predicted transcriptional regulators 32 18 Op 2 . + CDS 30459 - 30872 470 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 30945 - 30981 -1.0 - Term 30694 - 30753 4.5 33 19 Op 1 4/0.000 - CDS 30883 - 31635 925 ## COG0020 Undecaprenyl pyrophosphate synthase 34 19 Op 2 16/0.000 - CDS 31646 - 32362 597 ## COG1381 Recombinational DNA repair protein (RecF pathway) 35 19 Op 3 . - CDS 32364 - 33359 1224 ## COG1159 GTPase - Term 33539 - 33589 3.5 36 20 Tu 1 . - CDS 33780 - 34628 1041 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Term 34678 - 34720 0.8 37 21 Op 1 17/0.000 - CDS 34745 - 35320 791 ## COG0319 Predicted metal-dependent hydrolase 38 21 Op 2 1/0.500 - CDS 35317 - 36282 1242 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 39 21 Op 3 4/0.000 - CDS 36293 - 37033 786 ## COG1385 Uncharacterized protein conserved in bacteria 40 21 Op 4 3/0.000 - CDS 37033 - 38175 1418 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 41 21 Op 5 . - CDS 38230 - 39264 1390 ## COG1420 Transcriptional regulator of heat shock gene 42 21 Op 6 . - CDS 39275 - 40447 273 ## cauri_1811 hypothetical protein - Prom 40497 - 40556 3.1 Predicted protein(s) >gi|227860829|gb|ACLH01000091.1| GENE 1 71 - 340 150 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184601|ref|ZP_06044022.1| ## NR: gi|262184601|ref|ZP_06044022.1| hypothetical protein CaurA7_11457 [Corynebacterium aurimucosum ATCC 700975] # 1 89 31 119 119 112 100.0 1e-23 MVMRGALSGQFQCFAVVIMIVAVVVILASMVIYYVAKRPELAPAFPVDVAPAAAVATIIA FARGPTWALIPFRNWRGSLVSGRRKRLAF >gi|227860829|gb|ACLH01000091.1| GENE 2 342 - 542 143 66 aa, chain - ## HITS:1 COG:no KEGG:cauri_1781 NR:ns ## KEGG: cauri_1781 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 66 10 75 75 102 100.0 4e-21 MQKAGLAGTVIGFVVGGLVIAAIGLIYGFTIRALPLTGGGGADAGVLVRCRVECVGGHAR LPCHVP >gi|227860829|gb|ACLH01000091.1| GENE 3 1105 - 2400 772 431 aa, chain + ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 21 431 6 419 420 439 55.0 1e-123 MLEHDQNRQRVEDEMSSTPHVAFVGLGYIGLPTAVVMANSGLQVTGVDVNAINVDKINRG EVTIVEPGLEDELKKAVESGRFTASTEQTKADAYIIAVPTPFTEGHDVDMKFIYSAAEAI APQLEGNELIVLESTSPPLTTQKMAKRILELRPDLKADSDDAPADDKTIYFAHCPERILP GNAMTELRTNDRIIGGQTSEATRRATEIYASFCEGELLPTNDVTAEMAKLTENSFRDVNI AFANELSLIADRLGIDVWELIELANHHPRVNILQPGPGVGGHCIAVDPWFIVSTDPENSK LIKTARNINDDKPNWVINKVVEALGEPEGKKLAVLGLAFKPDIDDLRESPALNIACELAN RFKDIQISVVEPNITQLPDRLSGFQNVELKELDKAVDSADVVLMLVDHIQFKEFEAEKLK AKKVIDTKGIW >gi|227860829|gb|ACLH01000091.1| GENE 4 3326 - 4381 61 351 aa, chain + ## HITS:1 COG:no KEGG:cauri_1783 NR:ns ## KEGG: cauri_1783 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 351 297 647 647 715 100.0 0 MEDVKAYPLSAEDKATLQRNTVGKHALNFQGLYENTLGTHPSICFVGTALEAFRDYYSPA AKPTTSFETFTRIVSALGGYSSKSDDEKLTTELAYELWERYNMKTVLEHGFPVANILYQE LRAGRFQSEAINCQASAFLPINPIAIRKLFETAQSLPFYDRKNAVFAKSFIQKACPTLTQ FPINDKDFSIAKTNFVDVEAVFSRTAEDEPYERYEQTPPDIIQLKPENLHKGGERFFRKR FSAQTGSLRLTFHNHYNIGRDANNVVIFIRINDNDVYRLPIGKRNDPCTVAVDSLRYGDS VDLGVRSMRENGLAWSNVSLLKLTEWTETPIDFDSSQPLEISSTREFRVAE >gi|227860829|gb|ACLH01000091.1| GENE 5 4510 - 5208 122 232 aa, chain - ## HITS:1 COG:BS_tagH_1 KEGG:ns NR:ns ## COG: BS_tagH_1 COG1134 # Protein_GI_number: 16080623 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Bacillus subtilis # 5 177 48 220 235 166 43.0 3e-41 MYAEKGECIGILGRNGSGKSTLMRLIAGNEAPDEGQVLTSATPTLLNVSAALQPRLPGRT NIRLGLLAQGVSPEKIDELTEEIIDFAEIGKAVERPMKTYSSGMGARLKFAISTAVQRDL LLIDEALGTGDASFTERAQERMTGFLSNAGTIFLVSHAMASIKSMCSRVIWLHDGEIIAD GDVEPITLLYNKWTARAARKNFESAESLILGVKSTYKKPSILLDSQVSKLLN >gi|227860829|gb|ACLH01000091.1| GENE 6 5336 - 6247 418 303 aa, chain - ## HITS:1 COG:MA1176 KEGG:ns NR:ns ## COG: MA1176 COG1682 # Protein_GI_number: 20090042 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Methanosarcina acetivorans str.C2A # 40 299 3 256 260 62 23.0 8e-10 MADQQEADAIRSLQQAMPKNRRTVLVADEELISTNKRASLAKYLADTWRYRHFIFEHARF KAAGDNDDMFLGKLWNILEPLLRIAMYGVMFGVVLQTSRGIENFVGFLVIGLMYFSMMSR GLGSGSGLVQRSKAMMRTFRFPRVSLVVGEAIKGFISNIIPGALAVLAALAFQWGDPLSW SVVLIVPIYFLIHLFSFGLLLISARVTAFVPDAKKIVFFVNRAWFYVSGVFFSVERYARV PEMQEIMQANPAYRFLEAARSVVMYNQIPSLSEWLILVLWATGASAVGFIFFWRAEDRYV HVR >gi|227860829|gb|ACLH01000091.1| GENE 7 6369 - 7157 27 262 aa, chain - ## HITS:1 COG:no KEGG:cauri_1784 NR:ns ## KEGG: cauri_1784 # Name: not_defined # Def: polypeptide N-acetylgalactosaminyltransferase (EC:2.4.1.41) # Organism: C.aurimucosum # Pathway: not_defined # 1 262 173 434 434 533 100.0 1e-150 MRVIVVDDASDDPVTQEILDEVKGSVGNVDVVRLEGPPSGSASGPRNVGIELAKSDLVTF LDPDNEISVGGYDELVKQFYGSSVPVQMASGYQLKVGASIGLNARNALFHGRLVDRPSAL FTATQRFPVVSTQAAVISRVFLEDNKIRYVEGAVGQDTLFGWEILLNANAILFCHRPFIV YYSQRSGSITNDAGVDYFRRALIREKAQFEVLRQAGILSIYRKNQLPRMMDEIYKPKLDN LDGPGRDVAEGYVQEICGLYAL >gi|227860829|gb|ACLH01000091.1| GENE 8 7682 - 8536 168 284 aa, chain - ## HITS:1 COG:no KEGG:BACI_c52650 NR:ns ## KEGG: BACI_c52650 # Name: not_defined # Def: hypothetical protein # Organism: B.anthracis_CI # Pathway: not_defined # 40 262 43 259 273 114 31.0 5e-24 MNILELAQLEKASESELYDADREEFRFIVAVGECLVPVLVQPTAKYEDTLLVTYNGAIQR TKAPDGIVFQRSSWLDEFESPVIQIADPTMVKHKRLQIGWGQYSKNDWSIAAMVKVIDAV RARFGLAGPARTLHYGSSAGGFQAICCATFDRGSKALVNNPQLDWSYYNERFVNALLRDV FEGGNIEDVRVSQPWRVSVIELFEVEGYIPETEVMLNIASAGDVEQQLKPTLEKMTKLVA LGRVPLFSFGLYHDENMGHNPLARPHTVKKINSKLSSMRAVIEE >gi|227860829|gb|ACLH01000091.1| GENE 9 8545 - 9330 95 261 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184609|ref|ZP_06044030.1| ## NR: gi|262184609|ref|ZP_06044030.1| hypothetical protein CaurA7_11497 [Corynebacterium aurimucosum ATCC 700975] # 1 261 1 261 261 473 100.0 1e-132 MKRITRRQQLLVLLLLLAIVCGVFGVWLDTLVPMYLELVLVLLGLFIVLRSGERGQYKSF RKTEKLQKQLTVRLDNLDARLGGIGAELSKSENVPTVEPNGNVKVDEVFPLFEDLIDKMN EQAQGDSQITLSQQVSVRKVINWLRPTLLLTTDAWLRPLEEETKVNTAHWVRPDPSFKLP DEVKLAVVDSESFLAGRGSLMVSNHLGTCALVIIESPNTEKIESIAGFAEIAPVGMMHGV RLFYPSSALEPAKYSKLVKYI >gi|227860829|gb|ACLH01000091.1| GENE 10 9340 - 10092 250 250 aa, chain - ## HITS:1 COG:all5194 KEGG:ns NR:ns ## COG: all5194 COG0438 # Protein_GI_number: 17232686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 12 215 173 373 386 84 29.0 2e-16 MASLLDSRSEHGLDIGLIPNAVDVSRFSHLTPLEEKEFFAYDVGYVGSLVDYEGLATLIR AIALGKQKGRAIRAKIVGKGVELDKLRDLAETLSVEDLVELPGPVAAHEAVDVFEDVNVI VLPRVSTPATEYVTPLKPFEAMAAGRPLLVSSVSALSEVSRGGDAALVFNQGDSEDLLEK LIDLLEDREKQLSLSRYAKEVVATEHNWEYVAAEMAEEFKKLALPFGHLPFLTFAGKVQH HGSIVYPSHV >gi|227860829|gb|ACLH01000091.1| GENE 11 10579 - 10818 109 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENCNCPNSFIFSHLAQPHRARCLSNTLQQLYRVSRLSNCRSNILPLKPGKFLLTYALKV STIPSINNFRHDSDLRSIQ >gi|227860829|gb|ACLH01000091.1| GENE 12 10807 - 12357 477 516 aa, chain - ## HITS:1 COG:alr3425 KEGG:ns NR:ns ## COG: alr3425 COG0438 # Protein_GI_number: 17230917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 278 495 145 364 388 78 27.0 3e-14 MRGLRWINYLSVFVSFSVKKALIEPKRFFLLVSQRFMGYQVIGTVKAWTEAVEGRNREED TPSRRERLDFFLYVGDYDRALAEFKKMPLIKRCINFPKKILAKIKENQFYGAIYKGREAT GLGGSTNILYYVNNSLPYTQSGYTIRTAALTKTVREKVDSISTVTRLGYPLIIGKIPSPA KEPSGLNTLIPRVMPFREDRRYRLAKKLLMRVCAERGIDLIQTTSDFKNASLVSDVAHDL GIPWIYEIRGEPHNTWLSKFPVKIATEAEKSFHYRHSEQKEIEAAVKASAVIVLSELTKN KLVRAGISEDKIVTIPNAIDSGMQIDRKDALNIRTQMGLRGKKVVGTVSSLVSYEGLDTL IRALPNLDERIEVVFVGDGEDRGRLAALAASLELENRVHFVGKQPSSEIQSWYSIFDVFV VPRIDSRVTRYVTPIKPLNALAVGVPLVCSDLPALRAVTGGYAKFVPPQSPTDLAEAITE VIESPEKILAEKEWLDSMTWEANGRKLARLYRSLLN >gi|227860829|gb|ACLH01000091.1| GENE 13 12357 - 12941 95 194 aa, chain - ## HITS:1 COG:SP0351 KEGG:ns NR:ns ## COG: SP0351 COG0438 # Protein_GI_number: 15900280 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 17 149 225 361 409 73 32.0 2e-13 MLAARNPLVDRPLRVLYAGTLGRAQNLKNVIDAVRTAEQRGVPIELAFVGGGAAVDALRE YADMKDVDATFYHVRSASEVVSFYDWADTALVHLTDWEPLNRAVPSKTYELMSAGVHITG VVAGETAKIIRELNAGDVVPPERPLELAELFAELYACPDRLLVSDEGRLWVNREREVVVQ KRMDELIDWIGKVN >gi|227860829|gb|ACLH01000091.1| GENE 14 13716 - 13862 60 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYAAEQIALLCATRSNYIWRVLRMANPQGELDFLRGNYTFESCPSYLS >gi|227860829|gb|ACLH01000091.1| GENE 15 14053 - 14715 434 220 aa, chain - ## HITS:1 COG:no KEGG:cauri_1788 NR:ns ## KEGG: cauri_1788 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 220 1 220 220 404 100.0 1e-111 MEPRDIKCTNSQRTTVSQVLADAMSVGQLSVAEFEERSSACADATTRGELIDLVSDLLED PGRVLFGSQEAASKSSYAMNTVDGELATTVDRALAQVEPSVSGAQSLSLGIFGGTTVRST PIAARHTTMGIFGGTDVDLRGAALREHVTTIQAIGVFGGVDVWIPEGFRVRVSGIGLFGG HDIKVDRGAIDPADLPASAPEVVVNCFSLFGGVDVHVVKR >gi|227860829|gb|ACLH01000091.1| GENE 16 14791 - 15948 1424 385 aa, chain - ## HITS:1 COG:VC0917 KEGG:ns NR:ns ## COG: VC0917 COG0381 # Protein_GI_number: 15640933 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Vibrio cholerae # 5 368 3 372 372 348 49.0 9e-96 MSKPKIMTVYGTRPEAIKVAPVIKALEKDERFESVAVSTGQHKEMLEQVNTMFGIEPKLD LHLMKPGQGLNEIVSRALMGLDEIIDAEQPDVIISQGDTSTAMTAALAGFHRGVKIVHLE AGLRTGDIHSPFPEEANRKLIGQVAELHLAPTAGSMENLRRENVRSKDIAVTGNTVIDAL LEAASWDTAFEDPALQAVAESDKRLVVVTTHRRENLEAMKEIGGAVKDLAESYSDINFVL PLHLNPKVRDAVLPEVESLPNVLITDPLPYDQFTKLLDRATIILTDSGGVQEEAPALGKP VLVMRQNTERPEAVVAGTVKLVGTNRSLIVAEAKLLLDDDAAYTSMANAVNPYGDGKAAE RAVAAIAELLGVGERLPDFDPGIEL >gi|227860829|gb|ACLH01000091.1| GENE 17 16041 - 16223 149 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNSSHKAFASVNLIPVKTSKHTYAASAAVAMSALLTASVAAAEPRATGLEEPREVTVSED >gi|227860829|gb|ACLH01000091.1| GENE 18 16209 - 16403 146 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRVHVISIPYIYSSLLVAPLPHRHLPKTAKAGRLFMRIARFPYVVRKRWLLRRLEVKGM TSFQ >gi|227860829|gb|ACLH01000091.1| GENE 19 16400 - 16684 466 94 aa, chain + ## HITS:1 COG:no KEGG:cauri_1790 NR:ns ## KEGG: cauri_1790 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 94 1 94 94 136 100.0 3e-31 MIQFVVGAAAGYVFGTKAGRKRYHQIKGAYEKAVNSPATKAAVRSARKAVANRLDPEPRM RELKDYNKGRRGKRGTRGATDDMPADRIYEPDED >gi|227860829|gb|ACLH01000091.1| GENE 20 16693 - 18621 2538 642 aa, chain - ## HITS:1 COG:Cgl2216 KEGG:ns NR:ns ## COG: Cgl2216 COG0358 # Protein_GI_number: 19553466 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Corynebacterium glutamicum # 1 640 3 633 633 931 72.0 0 MARGRIPDSDIQAIRERAPIDEIVGEYVQLKPAGYDSLKGLSPFKDEKTPSFHVRPQRGY YHCFSTGKGGDVFSFLMEMEQVSFPEAVEAVAQKIGYHINYQGGSTGARDEKPGTRRRLI AANKAAHEFYRQQLETPQAAAGREFLLDRGFSKEIIYEFECGYAPEGWDTATKHLLRMGF SFEELDAAGISKMGKRGPIDRFHRRLLWPIKDLSGNVIGFGARKLFDDDKLGKYMNTPET MLYHKSKVLFGLDLAKRNIAEQHQAVVVEGYTDVMAMYAAGVKTAVASCGTAFGADHLQV LRRLMLDDSYFHGELIYTFDGDEAGQKAAMRAFEGEQKFTGQSFVSVAPDGMDPCDLRLE RGDAAVRDLVADRIPMFEFVIRSVISDFSIDSAEGRLQALRRAVPVVAQIRDEPLQREYA RRLAGWVGWPDPEEVLHQVRQEARKPKKEQRPRFASLEQTSSAPAQSNAPVMHIPGPREP HLWPQREALKLALQYPQIAGSYFDGITEDAYSNEAYRTIRRAISTLGGVTAGAEQPGVEW LAAVAGEMPDLMARNFVSELAVEPIKLGETGNPDTDLEAYADSVLSRLQEARVGDQVAQL KAQLGRMRPSDDEESYNSLFADLVALEQARRELNDRAFRGVR >gi|227860829|gb|ACLH01000091.1| GENE 21 18778 - 19284 540 168 aa, chain + ## HITS:1 COG:Cgl2217 KEGG:ns NR:ns ## COG: Cgl2217 COG4290 # Protein_GI_number: 19553467 # Func_class: F Nucleotide transport and metabolism # Function: Guanyl-specific ribonuclease Sa # Organism: Corynebacterium glutamicum # 17 168 3 154 154 160 53.0 1e-39 MSQSSPSKRSLPAIIGGAVLVLVAGYFGIDLGSSSDGADQKAAPSSAAGASGGNDGAKGD AAKQGESGLPTCAMDSLPEEAHETAEDILAGGPYDYPDNDNVRFGNYEGVLPQQAKNYYR EYTVETPGIGHRGAKRIVTGGGSETDPDVWYYTDDHYESFCSIPDAED >gi|227860829|gb|ACLH01000091.1| GENE 22 19288 - 19521 296 77 aa, chain + ## HITS:1 COG:no KEGG:cauri_1793 NR:ns ## KEGG: cauri_1793 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 77 1 77 77 140 100.0 1e-32 MQRILITEPIRTREDFYGALGRLRSCTSGAPRNLDALADFLREQHIVAIIAADFDMVEED LAPISMVLEDQGVALVR >gi|227860829|gb|ACLH01000091.1| GENE 23 19567 - 22863 4052 1098 aa, chain - ## HITS:1 COG:BS_yvnB KEGG:ns NR:ns ## COG: BS_yvnB COG1409 # Protein_GI_number: 16080557 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 235 927 638 1263 1289 204 27.0 7e-52 MSQKKSQKKLHKAALIASISLVGSSLVTPAIASAQDLPQADILDLSLENGTISNSASDAE PLNIGAPTVEQDSVLERPVAHFDGRKDAVGFDIGDKFDQIKDGFTVECVFRYDGEFDGNE KSLCANKEAGGWAMVIYGDQLTFTVNGSDGYKKAQQQVEPGQWYHAVGVYDGNKSELYVN GAKVAENTEINGEVTKPKSNSTAVMIGADSGRDNAAQFYSDAVVSEARIFSDPLGEEEIS ALYEDSNLSTDKKAEITGSTPSAGQHLTGPVTFDVQFNDDALISRELTYTLDGEEIEPGQ EIGAGLKEGNHSIQAEGRDVFGNPISQAIDFTSGNLPGAAGTDSEPSGEGVTISARADNP SGGEVETTFTEADVAVAEKGFQGTFTDIPESLDFEYEDGEDFDKALNPDNEDAQETSSTE DMPFQRFDLKVKDAEKKAHDIAWSGTVDPKRSVRLMAWNTKSNTWEKLAETRGAADAEVS LSAEVNQDFVDGGSIHTMLVGYDVFADDLNEPVNEQFADTSDYDFSIAHHTDTQYLSEGA VEKATAEERKKWEESYTAATQWIADNADERKIAYSAHTGDIIENWIGKDNDRPNAKKEFE VASNAQKILEDAGVVNGVLPGNHDNQSGADVGADNLYNEYFGPERYEAQQGKGKWAEQDA SYHPYAEGDNDNHYDLFSTNGMDFIALHLGYDVTEEEAAWADKVLKQYSDRNAILLTHAY LKPSASPDGRGSDFSHDGVMVYENVIQKNPNVALVLAGHEHGVSIVTRKDVGHTNNHVVE LLADYQFYEVGSDELGLTEIGEYDGDTGLRFGSSYLRLLQFDLKNSEMIVDTYSPLLDDH NATEYDDRQRYNGHEDEFRVPIQFQTRKTSFATNSMLALTDTGKEIGKDTAKSGWPASVT YKDVKAGEAYGWYATSADASSKEGTKPGIVRQFGVFTAQEQQLEPDNKAPELTVPSNKLT ITKGAEANLLEGVTAKDDKDGDLTDKVKVVGNIDTAKPGVYSVTYAVADSAGNQALASRV VEVTAGNQGDNTDNGDSSSDSGNSSSSSSDNSSRGTGSVLPAILGALFGAAGATAVIAGL LNYLAPEVRDTIKRALGL >gi|227860829|gb|ACLH01000091.1| GENE 24 23099 - 24373 1738 424 aa, chain - ## HITS:1 COG:Cgl2221 KEGG:ns NR:ns ## COG: Cgl2221 COG0232 # Protein_GI_number: 19553471 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Corynebacterium glutamicum # 3 423 2 423 424 528 69.0 1e-149 MSYSYRAEDVARLASESPKGSALLKTEEHRGAFSRDRARVLHSAALRRLADKTQVVGPRD GDTPRTRLTHSLEVSQIARSIGAGLGLDPDLCDMAGLTHDIGHPPYGHNGENALNEVALG GFEGNAQTLRILTKLEPKVVLDTPAGPRSYGLNLTRASLDAACKYPWTKTNPDGTTNRKY GAYDEDIDVLEWLRQGHSDQRKSMEAQVMDWSDDIAYSVHDVEDGIISRRISLGVLWDLV ELANLADKGAKAFGGTADELLEAADRLRQLDVINAIGNFDYSLRSYANLKKMTSELVGRY VGATVSATRAANAGPLGRMHGDLAVPPGAVAEVTLLKTIAVLYVMDEPAHLARQDRQRER IYRVYDYLVAGAPGSLDATFALWWKQAETDLERDRAIIDQIASMTESRLERLAQRSADLF GFLS >gi|227860829|gb|ACLH01000091.1| GENE 25 24385 - 24969 624 194 aa, chain - ## HITS:1 COG:Cgl2222 KEGG:ns NR:ns ## COG: Cgl2222 COG1434 # Protein_GI_number: 19553472 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 4 179 25 203 211 110 43.0 1e-24 MKYVIVLGAAQYDGRPSRILRGRVRYAAEYAAAHDLPIITVGGKLPGDRFTEAGVARALL DDDPLHVTALEEGLDTRSELAAAREKLGVSEAVIITDPLHRLRTFLIARQEGIRATVLGT PYYPSPRFSIPWWRYLAHETGGLAYLGLRTLLGEKRTEGVRAAFYRIERIIRPNQALRHR VIGARQTQEDQNSA >gi|227860829|gb|ACLH01000091.1| GENE 26 25014 - 27062 2332 682 aa, chain + ## HITS:1 COG:no KEGG:cauri_1796 NR:ns ## KEGG: cauri_1796 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 640 4 643 685 930 100.0 0 MTTAARFGRAALAALVLGLATASPAMAADFVLAAPEAASLTDKVTDEAGVLSDSEKAELE DKISALQQEHHVVIFVVFASSLPEGAESYADSIVKSKGPNSAAYVVGVDDSTVGVQTGNE WPRGRLDVMYEAAYAKLADGHQYGPSALALVDAAASGSSSGSAGSSSSSDSDGSGGWWLA GGAGALALAGGGAAVASRRKTKKDAAATLESARQIEPGNTAQLDRLDMSTLEKLAQEELV STDESIRRGKEELDIAVAEFGPERIRPFTRAMNHSTLTLQKAFQLQQKLQDNLPESTAER RQMLVEIISSCGQADDALDEQAADFAKMRDLLINASSKLDELTQRTVDLRGRLPQARTTL STLRGSYSEEVLSSIADNPEMAEVSLTEAEKLLSRGRELQSQPAGQQGPLVGYIRDAEHA LEVSDRLLNAVENAENSITAARDNLPALIDEVEEEIAEAQHLEQRGKAQGSPADWSALES LLAEAREALSAARQHGKADPLGQYTALTALDSKLDEQLDTVRETNATRERQIALYRQQIA AAESAIQAAEDLLSSRGRVVGPDARVALADATRLFAQAQNSASKDLRAALNYSRDAASAA QTSLNRAKEDLEAYRRQEQRRQATDAAGNILTGMVIGQILGGGSSRGHHGGGFGGGFSGG GGFGGGGFSGGGGGGGFRGGSF >gi|227860829|gb|ACLH01000091.1| GENE 27 27616 - 28044 494 142 aa, chain - ## HITS:1 COG:no KEGG:cauri_1797 NR:ns ## KEGG: cauri_1797 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 142 1 142 142 265 100.0 4e-70 MQRWVWRDEALVDGAGEVIARVSPTGLLLPETGITIAFEHTPGARRFTVRGADFSAEQAS FTVNKLRAVCQDREYLLERTNPFRRERRILALSDSATSAEVARTTPRGRGFEVAVGELPL TDAVFTSYCCLLLDGPARPLRT >gi|227860829|gb|ACLH01000091.1| GENE 28 28044 - 28562 558 172 aa, chain - ## HITS:1 COG:no KEGG:cauri_1798 NR:ns ## KEGG: cauri_1798 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 172 1 172 172 307 100.0 9e-83 MHYTSWDRSDRQNPVLLVGEGPASLGMFQERSADVEGEHWRLGLDDLGASVTLEDDRVYR LAGNPKRDKRLEASLDGRTFAFINEAGGDWIVEDHEGLKIAQFSSKNSGVRKAILEFEGE DSDDSDDLSHSEIAALSWFTRVILEARTQKTAVPIIATLLLMTIVAIIAVLL >gi|227860829|gb|ACLH01000091.1| GENE 29 28562 - 29941 2052 459 aa, chain - ## HITS:1 COG:Cgl2226 KEGG:ns NR:ns ## COG: Cgl2226 COG0423 # Protein_GI_number: 19553476 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 3 459 5 461 461 814 84.0 0 MASVIDTVVSLCKRRGLVYQAGEIYGGSRSAWDYGPLGVELKENIKRQWWRHMVQSRDDV VGVDTSVIQPRQVWVSSGHVEVFTDPLVESKHTGKRYRADHLIEAYEEKHGHEPANGLAD INDPETGQPGDWTEPKAFSGLLKTFLGPVDDEQGLHYLRPETAQGIFVNFKNVMTSARMK PPFGIANIGKSFRNEITPGNFIFRTREFEQMEMEFFVKPGEDEEWHQYWIDDRFNWYIDL GIKKENLRLYEHPQEKLSHYSKRTVDVEYAYNFKGSKWGELEGVANRTDYDLSVHTKGSG EDLSYFDQEAGERWTPYVIEPAAGLGRAMMAFLIDAYDEEEAPNAKGGTDKRVVLRLDRR LAPVKVAVLPLSKKEELSTPARELANKLRANWNVEFDVSGAIGRRYRRQDEIGTPFCVTY DFDTLEDNAVTVRERDSMEQERVKLDELEAYLAARLVGC >gi|227860829|gb|ACLH01000091.1| GENE 30 29975 - 30217 80 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRNGESKALMTEAAAARSKERVSVWVLVTPFTFSHFYRWRVKKRAIGTIAEECGNVYKMH HTSGVTARGGEGHARLGRTV >gi|227860829|gb|ACLH01000091.1| GENE 31 30123 - 30431 258 102 aa, chain + ## HITS:1 COG:Cgl2227 KEGG:ns NR:ns ## COG: Cgl2227 COG0640 # Protein_GI_number: 19553477 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 15 88 32 105 123 80 59.0 5e-16 MNGVTNTQTDTLSFDLAAAASVISALDSPLRMDIIQRLAERDHYVHELVSATGKSQPLIS QHLRVLKRANIVDSERTGREVRYSLVAPKVLPLLRDASLATS >gi|227860829|gb|ACLH01000091.1| GENE 32 30459 - 30872 470 137 aa, chain + ## HITS:1 COG:Cgl2228 KEGG:ns NR:ns ## COG: Cgl2228 COG0735 # Protein_GI_number: 19553478 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Corynebacterium glutamicum # 6 136 10 140 144 165 61.0 2e-41 MAIHDSIPKLGARNTRQRTAVVEVLRSLDKFVSAKDIHQALLDGDQKVGLTTVYRTLQSL SEIEAVDALHMPSGETLYRHCESDAHHHHLVCTKCGRTEEIDGGPIEEWASSVAKEHDFE LTGHDAEIFGICAECRA >gi|227860829|gb|ACLH01000091.1| GENE 33 30883 - 31635 925 250 aa, chain - ## HITS:1 COG:Cgl2231 KEGG:ns NR:ns ## COG: Cgl2231 COG0020 # Protein_GI_number: 19553481 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 13 247 7 241 243 375 78.0 1e-104 MITPDPNRVLHPPAIPQEFLPRHIALVMDGNGRWAEERGMKRTEGHRRGEAVLLDVVDAC LALGVPYLSAYAFSTENWRRSAEEVRFLMGFNRDVLRRQRHWLNERGVRVVWAGRRPRLW RSVIKELEAAEELTKDNTKMTLVMCVNYGGRAELVDGIRELAEQVSRGELDPRSINEKMV SSVMYDPDMPDVDLFLRPSGEKRTSNFLLWQSAYAEMIYQDKLFPDFTPEDLFAAVEEYA RRDRRFGGVK >gi|227860829|gb|ACLH01000091.1| GENE 34 31646 - 32362 597 238 aa, chain - ## HITS:1 COG:Cgl2232 KEGG:ns NR:ns ## COG: Cgl2232 COG1381 # Protein_GI_number: 19553482 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Corynebacterium glutamicum # 2 238 3 241 242 300 60.0 2e-81 MRENFRDRALVIRTYDFGEADRIIVLLTRHHGLVRGVAKGVRRAKSRFGSRLQLFVNLDV QLYPGRNLYTISQADTVDYFGARIIEDYERYTSACAALESAERLAAADAPGDPYLYEACV DVLDKLQHGDPLMLLDAFLLKAMSHAGWAPSLFDCAQCQRPGPHHAFHPAVGGAACHQCR PPGAAEVDPETLHHMWLITHDHPSQPTNAQAQEAHRLTRAHLQWHLERSVGALGIMEQ >gi|227860829|gb|ACLH01000091.1| GENE 35 32364 - 33359 1224 331 aa, chain - ## HITS:1 COG:Cgl2233 KEGG:ns NR:ns ## COG: Cgl2233 COG1159 # Protein_GI_number: 19553483 # Func_class: R General function prediction only # Function: GTPase # Organism: Corynebacterium glutamicum # 26 331 3 305 305 448 74.0 1e-126 MSTDFDAAFADLPAEGEANAADYSQYTDTPEGFRSGFVSFVGRPNTGKSTLTNALVGQKI AITADQPETTRHPIRGLVHREDAQIVLVDTPGLHRPRTLLGERLNEVVKDTYADVDVIGL TIPADEKIGPGDRWILENVRKVAPKTPIIGIVTKLDKASKDQVGAQLVALHELLSEENPD AVVIPVSATERVQLDELTQVIVDHLPEGPKFYPDDHITDEDQSKRIAELIRESALSGLKY ELPHSVAVEVDEILPSQERPDVLNVHAILYLERPGQKRIIEGKDGRRFRRIVGTARKEII QLLGHNVYLDLRIKVLKNWQSDPKALGRLGF >gi|227860829|gb|ACLH01000091.1| GENE 36 33780 - 34628 1041 282 aa, chain - ## HITS:1 COG:DRA0184 KEGG:ns NR:ns ## COG: DRA0184 COG2240 # Protein_GI_number: 15807852 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Deinococcus radiodurans # 2 282 42 328 329 251 46.0 8e-67 MNILSIQSHVTFGHVGNSAAVFPLQRAGHEVWPIHTVNFSNHTGYGDWGGPMIPAEEVTA IVDGIEKRGAFPRIDAILSGYQGGPDIAGAIVDAVNRIKAVNPSALYACDPVMGNAKSGC FVSDEIPPLLRDKVVPVADIITPNQFELGYLTDSEVGTLEQTLAAVKRAQEIGPKTVLVT SVQRPETGEDEIEMLAVDGERAFLVTTPKLPFKRNGSGDVTASLFTGHYVETHDAKEALK RTASSVFDLLQNTYEADSQELLLIESQDAFAHPQLQFQVEEL >gi|227860829|gb|ACLH01000091.1| GENE 37 34745 - 35320 791 191 aa, chain - ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 1 186 1 184 196 273 75.0 2e-73 MSIEFINESGYDGVNEEMLIDVCSYALGCLDVNPDAECTITAVDLDTIADLHVRWMDLEG PTDVMSFPMDELTPGASAGRPDAVEAGPAMLGDIVLCPEFAQRQATAAGHSLGHELALLT VHGCLHLLGYDHTTAAEEKEMFGLQNELLADWYEDLAARGVSYQPKPSGPKAFPDAAERA ELDKEVPGGGI >gi|227860829|gb|ACLH01000091.1| GENE 38 35317 - 36282 1242 321 aa, chain - ## HITS:1 COG:Cgl2236 KEGG:ns NR:ns ## COG: Cgl2236 COG1702 # Protein_GI_number: 19553486 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Corynebacterium glutamicum # 3 321 11 329 339 452 71.0 1e-127 MPIITTKFDLDSAYLATVLGPADDNLRVLGNLVGVDLFARGTTVTAAGPDYEVARARKVL EELEAIARRGHPVSTDTVKHTLDLVTVDAPASVSETLAADIVSRRGKAVRPKTVGQSRYV QAIDENTIVFGIGPAGTGKTYLAVAKAVQALRAKQVSRIILTRPAVEAGEKLGFLPGTLN DKIDPYLRPLYDALRDMIDPEMIPKLMEAGIIEVAPLAYMRGRTLNDAFVILDEAQNTTP AQMKMFLTRLGFGSTIVVTGDISQVDLPGGQVSGLRLVRRILKGVPDIHFAELGSGDVVR HQLVGRIVEAYDNFAEQEEKK >gi|227860829|gb|ACLH01000091.1| GENE 39 36293 - 37033 786 246 aa, chain - ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 246 1 241 241 213 53.0 2e-55 MSLPVFLHPDLSLAEVGQPVGLDGAEGRHAVTVKRMGPGEHLVLIDGSGRRATATITDTQ GKDTLAALVDDLVILPEPSPRVVVVQAIPKSERAELAVDLATQAGADEIIAWQADRCVSK WDAKKAPKALSKWESAAVAAAKQSRRARVPAVRGPLTTRQLCQEISGARALVLHEEAEVR LKDLTDLDAAETIYLLVGPEGGIGAEELARLQDAGAAAIKLGPEVLRTASASMVALASIG TLTARW >gi|227860829|gb|ACLH01000091.1| GENE 40 37033 - 38175 1418 380 aa, chain - ## HITS:1 COG:Cgl2238 KEGG:ns NR:ns ## COG: Cgl2238 COG0484 # Protein_GI_number: 19553488 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Corynebacterium glutamicum # 1 380 1 382 382 421 63.0 1e-118 MARDYYGILGVEKSASDAEIKKAYRKLARKYHPDVNPGDDEAAEKFREASLAQEVLLDPQ KRRVVDMGGDPMEERAAQGGGFGGFGGGGLGDIFAEFFGGGAASRGPRSRVQPGDDALLR TTITLEEAYSGVKQQVKVDTAVVCDRCEGSGSESKSKPVTCDHCGGMGQIQEVQRSMLGN MMTTRDCPKCYGFGEVVTDPCGHCGGDGRVRKRRDITVNIPAGIGDGMRIRMASQGEVGH GGGPAGDLYVEVHTEPHPVFERNADDLHLTVRVPMVDAALGSSCTVEQLDGEELTIDIAP GTQPGESITLQGKGMPRLRTDGFGNLHAHVDVVIPTDLDKKTREALEKVRAAGHGGTEVH RVGDNQGESLFTRLRGKFRR >gi|227860829|gb|ACLH01000091.1| GENE 41 38230 - 39264 1390 344 aa, chain - ## HITS:1 COG:Cgl2239 KEGG:ns NR:ns ## COG: Cgl2239 COG1420 # Protein_GI_number: 19553489 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Corynebacterium glutamicum # 12 344 1 331 331 392 68.0 1e-109 MSSSTDARRQEVLRAIVADYIASQSPVGSKALLERYQLGVSSATIRNDMAVLEAEGLIAQ EHASSGRVPTQKGYRQFVDTLHDVKPLSKAERRAMLTFLEGGVDLEDVLRRSVQLLAQVT KQAAVVQLPNLKVSRVKHCEVVALSPVRLLLVLITDNGRVDQRNVELDDVIDPEQTHRLR DILNTALEGKTLTEASVELAALVDDSPADIRPHLLKAATTLIETLVEQPSDRLIMAGTSN LTRVALTEGLPSIIEALEEQVVVLKLLARVPDLGNVSVSIGEENEADELRQTSVVATRYG FGTGSEAAALGGLGVVGPTYMDYSGTISKVSAVARYVSEILAGE >gi|227860829|gb|ACLH01000091.1| GENE 42 39275 - 40447 273 390 aa, chain - ## HITS:1 COG:no KEGG:cauri_1811 NR:ns ## KEGG: cauri_1811 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 390 23 412 412 759 100.0 0 MDDALNPYTPGSGIAPTVLTGRERDLHAFDNLVKRVQNGLLGRPMLLVGLRGVGKTVLLN QLKRKADQADWLTIKFEASQGARGREGARRALAQGLAKASLRYRTKAKVSEGFNFIAAAV KSFSLSVGQSIIDLGVEVGDIPPATGNLELDLHDVIEAITTTLLKEDKALGIFIDEMQDL DEELLEALISAQHEAGQLGLPFYIIGAGLPSLPGILAESRSYAERMFEVHQIGRLEMYAA LAAFREPARTQNVEFDDEAVEYLANVSGQYPYFIQEFGAQMWRTARTSPMDSDAARRAAR LGIEQLDRGFFQARWDRATPAERDYLTAMAKVGGVEISSKDIADILGKDTKKLGPVRAKL ISKGLIYAPEHGRVSYTVPNFDDFIARQNG Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:05:52 2011 Seq name: gi|227860828|gb|ACLH01000092.1| Corynebacterium aurimucosum ATCC 700975 contig00173, whole genome shotgun sequence Length of sequence - 30956 bp Number of predicted genes - 30, with homology - 29 Number of transcription units - 13, operones - 8 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 + CDS 3 - 1163 1474 ## COG1253 Hemolysins and related proteins containing CBS domains 2 1 Op 2 . + CDS 1160 - 2227 1323 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 2360 - 2407 15.0 - Term 2344 - 2397 19.6 3 2 Op 1 . - CDS 2446 - 3126 750 ## cauri_1815 hypothetical protein 4 2 Op 2 . - CDS 3252 - 5093 2562 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 5124 - 5183 1.9 + Prom 5075 - 5134 1.8 5 3 Tu 1 . + CDS 5178 - 7286 2185 ## COG1640 4-alpha-glucanotransferase + Term 7427 - 7464 1.2 - Term 7011 - 7058 -1.0 6 4 Op 1 . - CDS 7299 - 7454 214 ## gi|262184645|ref|ZP_06044066.1| hypothetical protein CaurA7_11679 7 4 Op 2 . - CDS 7441 - 7605 121 ## gi|262184646|ref|ZP_06044067.1| hypothetical protein CaurA7_11684 8 5 Tu 1 . + CDS 7629 - 8900 1119 ## COG2272 Carboxylesterase type B + Term 9095 - 9133 1.1 9 6 Op 1 . - CDS 8939 - 9463 750 ## COG1443 Isopentenyldiphosphate isomerase 10 6 Op 2 . - CDS 9460 - 9996 394 ## cauri_1820 putative secreted protein 11 7 Op 1 . + CDS 10087 - 11919 253 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 12 7 Op 2 1/0.333 + CDS 11930 - 13027 1474 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 13 7 Op 3 1/0.333 + CDS 13045 - 14406 1629 ## COG1114 Branched-chain amino acid permeases 14 7 Op 4 2/0.000 + CDS 14410 - 15390 1321 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 15391 - 15428 8.5 15 7 Op 5 . + CDS 15461 - 16216 830 ## COG2188 Transcriptional regulators 16 7 Op 6 38/0.000 + CDS 16213 - 17634 1736 ## COG0747 ABC-type dipeptide transport system, periplasmic component 17 7 Op 7 49/0.000 + CDS 17658 - 18536 217 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 18 7 Op 8 13/0.000 + CDS 18533 - 19291 857 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 19 7 Op 9 . + CDS 19275 - 20495 388 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 7 Op 10 . + CDS 20467 - 22104 1623 ## COG1289 Predicted membrane protein 21 8 Tu 1 . - CDS 22157 - 22270 77 ## 22 9 Op 1 . + CDS 22353 - 24209 2042 ## COG1292 Choline-glycine betaine transporter 23 9 Op 2 . + CDS 24210 - 24590 470 ## cauri_1832 hypothetical protein 24 10 Op 1 19/0.000 - CDS 24587 - 25234 665 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 25 10 Op 2 . - CDS 25234 - 26415 1088 ## COG4585 Signal transduction histidine kinase - Prom 26456 - 26515 3.4 26 11 Op 1 . + CDS 26504 - 27292 848 ## cauri_1835 hypothetical protein 27 11 Op 2 . + CDS 27289 - 27711 527 ## cauri_1836 putative secreted protein 28 11 Op 3 . + CDS 27708 - 28466 727 ## cauri_1837 hypothetical protein 29 12 Tu 1 . - CDS 28414 - 29769 1224 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 29792 - 29851 2.5 30 13 Tu 1 . + CDS 29832 - 30914 1003 ## COG0627 Predicted esterase + Term 30930 - 30956 -0.6 Predicted protein(s) >gi|227860828|gb|ACLH01000092.1| GENE 1 3 - 1163 1474 386 aa, chain + ## HITS:1 COG:Cgl1168 KEGG:ns NR:ns ## COG: Cgl1168 COG1253 # Protein_GI_number: 19552418 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Corynebacterium glutamicum # 1 381 73 458 467 436 59.0 1e-122 TITGLLIGYVAEPLVGQGLGQLLGGVGVPTGVSVAIGTVTALAVSTVLTMLFAELFPKNY TIAAPMKSALWLSASTMWYLKIFGWLIHFFEYSSNALLKVFGIEPVEDVDSSATTDDLES IVDASHEAGDLDEDTYLVLDRLLDFPEHDVEHAMIPRSRVDVIEPETTIGEVREMMSENH TRYPIIDDEHNPIGVVHLYDVLGSELPLATPAREIMKTPVVVPELMPLPDVVTELRDADE KLACVIDEYGGFVGIVTMEDLAEEILGDVTDEHDLEETEEITEQDDTHWIVDGDTPIDEV ERAIGHDLPEGDFETVAGLLIAHSGTLPEEGEELSIELEAEPEDWVDGDEAPTRTLNVRV EEIDRHVPSVLALELVEEFPEGEDDL >gi|227860828|gb|ACLH01000092.1| GENE 2 1160 - 2227 1323 355 aa, chain + ## HITS:1 COG:Cgl1167 KEGG:ns NR:ns ## COG: Cgl1167 COG1253 # Protein_GI_number: 19552417 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Corynebacterium glutamicum # 5 337 4 333 336 346 57.0 5e-95 MTDTWWFNLLITILIIAASGFFVVIEFSLMGARRNRLEETAESSAASRAGLRSLNELTIM LAGAQLGITAATFVLGAVTKPWVHHLLMRPLEALGLPLGVADVISFLLALFVVTFLHLVI GEMAPKSWAIAHPETALQLIAVPARGFIWLFRPLLIWINKMANKLVKMTGEEPVDRAGAA GYDAETLRHLVEHSRLTGTLDDDSANQITGVIELEASTAAQLAREHGSEILPLSSDATVA ELHELVVRKSIMRVLVYPRTSRIPRIVHVRDTLLADPDTPVLDFSRPALAVGSSSTVQKT LDQMRARNEQLVVVGKPTKDKTVWILTWDDIMGQLWPQITEQLDQAAPAAKNPGA >gi|227860828|gb|ACLH01000092.1| GENE 3 2446 - 3126 750 226 aa, chain - ## HITS:1 COG:no KEGG:cauri_1815 NR:ns ## KEGG: cauri_1815 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 226 1 226 226 410 100.0 1e-113 MHKIAAELRHRELTQEIYNIGDEVVDYIEHLIEAIEDWDDELALDCLAELGDIVEDARVD SGRCVGELIGLRHALVSGLKSGTISAASSGDNDVEEPKQLTARALAEGLPISGPPVVVSE LAETLRGRTATVAAYLRELVEYVLAQTDAVARNLDVVSLPNLYKRAGESSLIAVQAWRHT VVEAHPAYVRTMRGHNPPPFLEERARIDAVVARVRAKRQKKAATTA >gi|227860828|gb|ACLH01000092.1| GENE 4 3252 - 5093 2562 613 aa, chain - ## HITS:1 COG:Cgl2244 KEGG:ns NR:ns ## COG: Cgl2244 COG1022 # Protein_GI_number: 19553494 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Corynebacterium glutamicum # 2 609 6 613 615 862 68.0 0 MTLNEAHTKAEFEIKDGETCLTAMMATAHARPHGVLFTRPANYEWVNVTAKEFVEEVYAV AKGLIAFGVEQGDRVALISTTRYEWSLLDYAIWAAGAISVPVYPSSSMSQVQWIIEDSGA ILAITETREHSELVKHLKLQEDGTPQLHGSPSQLRRVLEINSSAIDTLKFEGRDVSDDTV DQRIEATSTDDVASLVYTSGTTGRPKGCMLTHRNWLAEARGLLTNPIGAIAVPGSHVLTF LPLAHVFSRAVSLAVTIGGASQNHWSDFSTITIEFARSRPNLILGVPRVFEKVRNGASAK AHASSAFKGAVFDRAEKVAIEYSKALDTPEGPNRVLKAKRKAYDKLVYSAIRQAMGGEVK YCISGGSAISQDLLHWYRGIGVTIYEGYGLTETAAAAAVDFVDQSIGTVGPPLGGTTLRI NEDGEILIKGDIVFKGYWQNEEATENSLQDGWYNTGDLGEIDEDGKLVITGRKKDLIVTA GGKNVSPGPMEDILRSHPLISQAMVVGDGKPFIGVLLTLDEDALKRWKADHNISATKGMR EVAADPALRADIQDAINQVNATVSHAEGIKKFVILDQDLTEESNELTPTLKVKRYVVAQR YAADIERLYTGKK >gi|227860828|gb|ACLH01000092.1| GENE 5 5178 - 7286 2185 702 aa, chain + ## HITS:1 COG:Cgl2245 KEGG:ns NR:ns ## COG: Cgl2245 COG1640 # Protein_GI_number: 19553495 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Corynebacterium glutamicum # 4 697 1 705 706 782 57.0 0 MGDVTTRDLLQELAQRHGVACEYTAQNGQPVYVSEETITYTLRALGVSISERPDDDELTQ ALFEDYLERASRPLPPCVVAREGAEKSFAVHVHDGDPVTVTIELENGETRPTYQDPNDAP AADVAGTMWGEASFHVPGDLPLGFHKLRLSSPGIGEHECPLIVVPNHLSTADRYLDRPAA GAMAQLYSVRSEKSWGMGDFGDLAELAETLAPDYDFLLINPLHAGEPIPPVEDSPYLPTT RRFINPIYIRIEDIPELKQLSPELQEDVAELAAEFRERNRSAEEIDRDSIFEAKLQVLQE LFSKGMTPERRTAFSEYQRREGRGLRNFALWCAETELSRHSGRRHALSLDVNDVAEFYSW LQFLCDEQLDAAQRRALDAGMSIGLITDMAVGIHPAGADAVNLAEYLAPQCSVGAPPDDY NQQGQDWSQPPWHPVRLAEAGYEPWRDLLRTMLGNAGGLRVDHVLGLFRLYWIPRQSTPL NGTYVTYDWEAMLGILALEAERAGAVLVGEDLGTLEPWVQNALRDMGVLGTTIIWFEHAE DGPTPRPQDQYRHMAMSSVGTHDLPPTLAFLRGDHIELRARLGLLTRPVAEEEAEDRAWQ EKVKDNLQAYGMLENRESEEDVLVALHRYVAGTPSALTVTNVVDMVGDVRAQNQPGTTKD QYPNWCIPLCDTAGKPVLLEDLPKQELYQRLAQAAKRPGAER >gi|227860828|gb|ACLH01000092.1| GENE 6 7299 - 7454 214 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184645|ref|ZP_06044066.1| ## NR: gi|262184645|ref|ZP_06044066.1| hypothetical protein CaurA7_11679 [Corynebacterium aurimucosum ATCC 700975] # 1 40 1 40 51 75 100.0 1e-12 MTPDDHREGLWDPERSQPSHRKRALPKSRVSMTLWLMIALIVVVAIVGVVL >gi|227860828|gb|ACLH01000092.1| GENE 7 7441 - 7605 121 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184646|ref|ZP_06044067.1| ## NR: gi|262184646|ref|ZP_06044067.1| hypothetical protein CaurA7_11684 [Corynebacterium aurimucosum ATCC 700975] # 1 54 1 54 54 70 100.0 5e-11 MEWLVQAPVWAQMAVLAVTAVPAATVMGWVLMWAIDRVNAWLVPATRMKKHDSR >gi|227860828|gb|ACLH01000092.1| GENE 8 7629 - 8900 1119 423 aa, chain + ## HITS:1 COG:Cgl2249 KEGG:ns NR:ns ## COG: Cgl2249 COG2272 # Protein_GI_number: 19553499 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Corynebacterium glutamicum # 2 416 3 393 393 285 42.0 2e-76 MSSAPFDVTCPAGTITGYLDEDVAHFHSIEYSHIPGDFENPEPAPPRDQDARTPHPEKVA LTITAPAPGSRASSLAPTLVYIHGGRYEHGSHEDPRAEGTPTAQAGIVHVQLGYRVGLPG LARFRDDEPDRYRAIEDLQLGLEWIQRNIEAFGGDPTNVTILGQSAGANAVLWLCRRDHY RGAFRRAIALSPGFPRETFEERQATLRQAMKKPITRSSLAAMSQEELAAGYAKFRKKYSL DMALGPTPLECGQLADVPLILGSTRDEFYNIPATQKIDRSPFRGLILRYAAPRFGFPRNG FTPWYQVAQHMDKERPMGRMVGDAIIRRWAAEVAEKAPGKTWMVEFTRSSGPALHCEELP PLFGESPLAQWLRDVVRTGEPGFEAYRPEHAIWEYNLDNGENRVAYASLDYISAAFAQDG SLL >gi|227860828|gb|ACLH01000092.1| GENE 9 8939 - 9463 750 174 aa, chain - ## HITS:1 COG:Cgl2252 KEGG:ns NR:ns ## COG: Cgl2252 COG1443 # Protein_GI_number: 19553502 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Corynebacterium glutamicum # 3 173 6 183 189 187 58.0 1e-47 MTELVVLASPEGKPAGTADKAAVHTADTPLHFAFSAWVVRDGQLLLTRRALSKLTWPGVW TNSFCGHPGPDEPTADAVLRRGRFELGLTGTPRLVLPDFAYRAVDSSGVVENEICPVYLF QTEDDPAPNPEEVDSFAWAPVRDVLAAVDATPFAFSPWMVEELTHEPLRAALLG >gi|227860828|gb|ACLH01000092.1| GENE 10 9460 - 9996 394 178 aa, chain - ## HITS:1 COG:no KEGG:cauri_1820 NR:ns ## KEGG: cauri_1820 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 178 1 178 178 333 100.0 3e-90 MKKYLPLACAPLCLAALSGCSILQPPDVGPQDNIVVSSSEPPAFEAKDVDAHEVTSNLAA PVKDEGLNVEFELQGLYSGGGGTVLTVKIHNLNEVPMPVDALPEPTLERADGNGGWATVD SIDVDPAVHPDVAAPGLDHPLGAGASTNLQYVYNVAPGNLWNARFSIGNVRYVGDLNL >gi|227860828|gb|ACLH01000092.1| GENE 11 10087 - 11919 253 610 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 350 577 127 354 398 102 33 4e-21 MNSILRIVRSASALWPFYLGVLITASVTAILSLLTPFILREATDTVVAGGPLHTILWWVV ALFVADALGNVVKNIGGYIGDVMVARLRQILSTRYFAKLLSVPQGYYDNQVTGTIIARLD RSIANITQFLQSFSNTFFVMLIQAAAVLVITAVYYWPLAILLAVLFPIYMWLTALTSERW QEYEAIKNENIDVADGRFAEVIGQVKVTKSFVAEARELASFGSHYRTVVDTTKPQSRWWH SMDTARGAAMALIFLGIYGLIFWRTLEGHFSIGDMVMLLQLVNMAKQPVFMMSWIVDVSQ RAIAGSKDYFKVMEEIPEPTVNPQLVAAAETSDVPELDLAPAKPLLPSEGPVFAFEDVSF SYESDKPVVADITFAAQEGHKVALVGESGGGKSTLVNLLLGLYQPTEGKLTVLGHDAAEL TAERLRASVGVVFQESYLFSGTIRENIAYGKPGATMEEIVDVAKRANAHGFIEEFPDGYD TVIGERGLKLSGGQKQRVAVARAMLKDAPILVLDEATSALDTKAERAVQAGLDELMKNRT TLIIAHRLSTIADVDTIIALDRGRISEIGSPAELAQSGGIYAELLRLTQSASAADRQRLK KYGFVQATDE >gi|227860828|gb|ACLH01000092.1| GENE 12 11930 - 13027 1474 365 aa, chain + ## HITS:1 COG:Cgl2256 KEGG:ns NR:ns ## COG: Cgl2256 COG1168 # Protein_GI_number: 19553506 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Corynebacterium glutamicum # 1 360 1 364 368 367 53.0 1e-101 MRFPSLKELSARGTRKWTVFDEDIIPLWIAESDFLTAPAVKEAIQEAVDAESFGYTPAPK ASELNAAIADFYESRYGWRPEHVFWIGDVVRGLLLGVQYFTEGAVAVPVPSYPPLLELPE TAGREKIETSLELDDIERAFKAGAGSILLSHPYNPLGIVFDEDWLRGLVELAEKYDARIL SDEIHAPLVYEGRHIPLGALSDRVITVTATSKAWNTAGLKCAQVIFSNTADVERWNSLTG VAKDGTGTLGVLAAEAAYRHGSEFLDEEIEYLKKTRDWLVEELPKRVPGLKTSHPQATYL LWLDFSETAIGDNPKPAAWVREHAKVALNEGVTFGTGGEHHARLNFATSRELLEEALDRL EKAFS >gi|227860828|gb|ACLH01000092.1| GENE 13 13045 - 14406 1629 453 aa, chain + ## HITS:1 COG:Cgl2257 KEGG:ns NR:ns ## COG: Cgl2257 COG1114 # Protein_GI_number: 19553507 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Corynebacterium glutamicum # 30 442 6 409 426 327 51.0 4e-89 MGIILRKMSINDVRAPAQSASKSGSPIGIVIVASLMLFSMFFGAGNLIFPPEVGVSSGTN FWPATLGFLAAGVALPVLAVIAVAISGQSVRDIGNHGGKIFGVAFSVIAYLAIGAFYALP RTGAVSMETAITPLLGWEGTFANGAFNVVFFLIALALAWRPNNIIDALGKFLTPALVILL AVLITLATVANPRVPGTPTEEYASAPFVTGLFEGYNTMDAIAGLAFSIVIVTSLRSKGFS TDRALLRGTITSAVIAGALLAAIYLGLAWIGQTMPNGASYDSGAALLADASNLTMGNVGQ AVFSAIVILACMTTAVGLISATSEFFALLVPKTNYHFWACLFTALSIAFAFQGLDTVLAI AVPFIVFLYPPAISLIALTLLQPAVKRWVTFYWGFRLALWVSVLWSAATSFGAPLSFSPG QDVGLGWVVPTLLAFAIGVIIDVVSTSSSKKSE >gi|227860828|gb|ACLH01000092.1| GENE 14 14410 - 15390 1321 326 aa, chain + ## HITS:1 COG:Cgl2258 KEGG:ns NR:ns ## COG: Cgl2258 COG2141 # Protein_GI_number: 19553508 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 7 324 5 324 326 419 66.0 1e-117 MTPRAALSILDFCTIYEGETPSQSMARSVELAQQAEALGFERMWYTEHHNMPSISSSAPA VLIAHIGAKTERIRLGSGGIMLPNHAPYVIAEQFGTLAELYPGRIDLGLGRAPGTDMKTL GRALRRDRNAAERFPEDVKELQGYLSGKSLVPGVQAIPGHGTNVPIYILGSSLFGASLAA KFGLPYAFASHFAPQHLETATAYYRENYQPSEAHPEPYVIAGVNVTAGDDAEEEFEKVCF RRVKAFVGRGKQLSDADVARIIDSPQGQQIISMLQYSAVGNVEHVREYLTDFQKLAQADE LMISLQSTSHKAALGNMANLAQAWQM >gi|227860828|gb|ACLH01000092.1| GENE 15 15461 - 16216 830 251 aa, chain + ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 12 238 14 240 240 100 28.0 3e-21 MALRRTQQHSMIADYLRNLIRSKKLSPGDFLPSEAELCEQFSSSRGPVRQAVAALRSEGL ISSGRGRRSVVLGRFTSESFDSIYSVTHWLRERGFEPGASTLWLGRCPATDREAEFLRVE PGSPVIFVHRVRSANGMPIAIERMFFPLEVGSQILSFDADNESIHDHLRSQGVDFDNVNR ELSLASASEEDARSLNVEPGTPLWRLHLDISDHSGHPVECTKILYLGDRMTLGMTNVRGT TSPLEVKLSEG >gi|227860828|gb|ACLH01000092.1| GENE 16 16213 - 17634 1736 473 aa, chain + ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 17 469 19 491 503 472 55.0 1e-133 MMKAWIGALGVIVGASLSACSAGSTAVVDSDSAALTLATTTPATSLDFTTVGGAAIPAAL MSNVYETLVRISPEGEIVPGLADSWEVESTRYTFHLREASFSNGEAFTAHTAAWSINAVK TEWTNGISAQMDVVESATAVDDHTLVVELSRPSAGWLWSMGTAIGAMRTPTEAVGTGPFA VAGFSPNEYIALRARPDYWGTPAKEDITIRYFPDSLTAVNALRSGGVDAVWGVQNPELLD TLGDSIDTAVGTTNGEVLLSMNNHAAPFDDPRVRRAVAYGIDRQAANEILWEGRAKDTGG APVPPTDPWFSGKDYYPYDPARARALMEEAGAVGTPLTLTVPSLPYAQTLSEFLYSQLEE MGFEVTLETAEFPAVWLSQVMGAKDYQMSLVAHVEPRDIPTIFGNPDYYLGYDSPQARTL LERDDMKGAVDQIMEDMPALTLMNMPNIVLYREGLTGLQPNQITDAIELRGVR >gi|227860828|gb|ACLH01000092.1| GENE 17 17658 - 18536 217 292 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 50 290 43 314 320 88 25 6e-17 MWAASIIIFLLMRAVPGNPARVALGVNATDEAVEKLTHSMGLDRPLLVQYVEWMKGLLTG NFGISLSSQQDITPLVIDRAQVTLLLIGLAIALALAGAIPMGILLARFRLPVLNAATQLG IAVPSFLVGILLVAVFSVHLGWLPANGWQLPREGLSHLILPVISLALVQGAMLTRYVRAT LREEMDKDYIRTARSLGESRTGALIRHGLRNAALPVLTVTGVQLSTLVVGAVVIENVFVI PGLGSLLLDAVSTRDLTTVQTLIMVFVTFTLTVNLLTDLAYRVIDPRLKEAR >gi|227860828|gb|ACLH01000092.1| GENE 18 18533 - 19291 857 252 aa, chain + ## HITS:1 COG:Cgl2270 KEGG:ns NR:ns ## COG: Cgl2270 COG1173 # Protein_GI_number: 19553520 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 2 246 12 260 276 222 60.0 5e-58 MKPGYILVGLTILLALVSLVWTPYDPNLISPDRLAGPSLEHLMGTDRFGRDTFSRILAGA QITVLVGVVAVAIAALIGVPLGIIAGMRGGGFIMAATDLLLAFPALLLAIVAGAVWGSST LTATIAIGIAGIPSFIRVTRSGTLQIMTQDYIAAARISRVPPALIAWRHVLPNLGGIVAI QASVYFALAVLAEAGLSYLGLGTAPPTASWGRMLHDAQPLLATHPLQALWPGLAIAGTVL GFNLLGSHADRH >gi|227860828|gb|ACLH01000092.1| GENE 19 19275 - 20495 388 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 209 396 35 251 329 154 39 8e-37 MLTVTDLRVGPVGPLSFSIAPGERVGLIGDSGSGKSLTALAIMGLLPDHLQATGSIQFNG QELLGMRDRDLRKLPLAMVFQEPMTALDPLMKVPGFNRFPHQLSGGQRQRALIEMAMARH PKLLICDEPTTALDPFTQEEILSTIVDAADSEDTALLFISHDQDVVKRVCDRVVRIGEVT TPNLTPPPMPTLGEPVITLKNVTKTYCGVTALDDVSLTVREGERLGIVGGSGSGKSTLLK LLTGLAEPTSGTVAVKKRVHMVFQDPKGSLNPRMPIWKIVAEGGGTREEAEAVLREVGIE GFERYPRDFSGGQRQRISLARAVVGKPEILLADEAVSALDATSRAQVLELLQRVTKDMTL VFVSHDIDVVRHLCPTVAVLQDGRLVEHGEASKVFSRYGTPSAATS >gi|227860828|gb|ACLH01000092.1| GENE 20 20467 - 22104 1623 545 aa, chain + ## HITS:1 COG:BS_yvaC KEGG:ns NR:ns ## COG: BS_yvaC COG1289 # Protein_GI_number: 16080408 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 25 515 28 563 631 69 21.0 2e-11 MEHPLPQRPNALQLFTAFNTSARRWPGALRAALAIIIPGGIAVLTGHPDAVLLVSAGAFS VIYGEGHPYRTRRRVILTAGGLLTLAATAGSLVGVHGLALSAVFTVMLATIGAFVQNALR LPPPGSFFIVMVAGGSTMLRGVSPWEVAAWSLAGVAAGYVLGMLPRFRDPHGPETRAVAA LERAAEAFVNSDSDFLARHHQAQSAISTAWQALADAGVIRGGRIRHPAQAELVHRALAAQ QRIVAHHKQVGGNSDELSDSPTYVDPDRTSIPHTKPTMRYRFYRAAVGNSHAVVTAEKIA FGGLATAFIGMALGLNRPDWGAVSVLLLLQWGPDRVPGTIRGVQRMLGSVLGVCVFALIA SFSPHGWGLVLALAFCQFCAEILVVKNYALCVIFSTPLALLMGNSSEHMAHTIGSRMAEI GLSVVVAMLFLWLWKPRAQQTNHYRLQTRCFEAMAALLGALLIKTPEEALAQRRDLHYEL LSERRSIQSLATNHSDISQFWERHTALQTAGYFLLDFCVVNPLTQPSRAELDTLIEKITA AEMRS >gi|227860828|gb|ACLH01000092.1| GENE 21 22157 - 22270 77 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLPNFDENVRELEEAFALFELVEEHVLDPNLLFSVR >gi|227860828|gb|ACLH01000092.1| GENE 22 22353 - 24209 2042 618 aa, chain + ## HITS:1 COG:Cgl2282 KEGG:ns NR:ns ## COG: Cgl2282 COG1292 # Protein_GI_number: 19553532 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Corynebacterium glutamicum # 14 617 21 624 630 838 71.0 0 MNSRQATGPPVGIYPHDMHPGLVPGIGVEDQRNAFALDKITFFSTATFVVAFIVWGISSP ESVSAASSTAFSWAITNAGWLLNITMIMAVATMLYIGCSRLGRIKLGTDDEEPELGWFSW VAMMFGAGIGVGIFFYGPSEPLSHYITPPPHTVDGNTVEALHQSMAQAHYHWGISPWAAY ALVGGAIAYSSYRRGRVPLVSSIFKPLFGSRDTDGPLGKLIDVLALVATLFGTAATLGLS AIQIGQGVSIIRGAGPMTNTVLIVIIAVLGCGFIVSAVSGVSRGVRYLSNFNITLTLALV FFVFLAGPTLLLLNLIPSGIVTYIDQLLPMMAKGLSWGDETVEFQSYWTAFYWAWWIAWT PFVGMFVARISRGRTLREFTAVTVFAPSLILILAFTIFGGTAITFQRENLPNFDGSASGE QVLFAMFDNLPLSSITPFILIVVLAVFFITSADSASVIMGTMSSKGDPAPNKFIVIFWGL CMMGIAVVMLLTGGEDVLTGLQNLTILSALPFCIVLLVMMVAFIKDLRSDPMFIRRAYAR AAVENAVVRGIEEHGDDFELTVEHADEGRGAGSDFDSSAHRYTDWYQRTDEKGENVDYDF DTDTWADGYDPNTEQKEK >gi|227860828|gb|ACLH01000092.1| GENE 23 24210 - 24590 470 126 aa, chain + ## HITS:1 COG:no KEGG:cauri_1832 NR:ns ## KEGG: cauri_1832 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 126 1 126 126 227 100.0 1e-58 MGLPDDVVLYGYTLIEQHEIDHEFLINGSPFAAVTPLLFALTIAGMLLVAGSFFLRGSRR IIAGLLGAVLTLTKLWWMPLALARQFNDSQVFGYALKYYPQYWPAASIIVIVIALLGLAS AFIRRR >gi|227860828|gb|ACLH01000092.1| GENE 24 24587 - 25234 665 215 aa, chain - ## HITS:1 COG:all4635 KEGG:ns NR:ns ## COG: all4635 COG2197 # Protein_GI_number: 17232127 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 1 209 1 206 219 160 43.0 2e-39 MISVVLVDDEQALRRGIRFILEGAADIEVVAEASNGREGVARVLDLQPDVVLMDIRMPVM DGIEAAGKLRASAPDIPVVMLTAFDTDEFIVDALHAGAMGFLLKTIEPEGLVLAVRAAAT GQQLLSPKALKNLLALKRPEPAPAEPEALEARPLEGLSQRENEVAQLVAQGLDNQEIAGQ LYVSVTTVKTHIKHILDKLGGTNRVHIAIAVLEAR >gi|227860828|gb|ACLH01000092.1| GENE 25 25234 - 26415 1088 393 aa, chain - ## HITS:1 COG:BS_yvfT KEGG:ns NR:ns ## COG: BS_yvfT COG4585 # Protein_GI_number: 16080460 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 153 380 98 315 328 93 28.0 6e-19 MTRKTRPLWITVLLILLCVVADLAAWIPHIENFEGTDQEALVLGLMGLFSFATWILLPFA LHHSRRERNIHEEYPGHPVVLVAALLVLVLGGLRPLSLSVLVVLISIISRGRLRWSLAGT AVFVASCVTVISVPYIRMNIFDPFGYVFYGSLFLIVAWITGSVRAQRRQREVTLVSLAEL NEDQLRSREERARLEERNRIARDIHDSLSHRLSLISVYAGGLSYRKDADPERVAEAADTI QSEAKAAVEDLRGVIKALRVDDRVDPRASIEEHIERARAAGTKVRYKKGDVHERVDKLGT MAAHTLGRAVQEGLTNARKYAPGKKVTLTVENEEDKVRVTMQNKKVADPPESGGGNGLLG LEERARLAGGTFTVLDDASTFTWVLELPEEARA >gi|227860828|gb|ACLH01000092.1| GENE 26 26504 - 27292 848 262 aa, chain + ## HITS:1 COG:no KEGG:cauri_1835 NR:ns ## KEGG: cauri_1835 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 262 45 306 306 468 100.0 1e-130 MRRTQTLYELLTAAGLVYVAYDFSHGAFVPTSALAAVAYAAVALVLTLLILRKHPGIAHG VVWGIAVSTVAGQLNEHMNHLLIRTAPDWLVIAGIAPLNEEVLKFLGVIFICTCVIRPRH WADYVFVGVAVGMGFSVSENAVYYVNMTLENLDSDLKGTLLALLTRFIANPLMHSFFTGI TAFGLSRRQPVRWLLIAMAVHFTANFGASISTAFEDALWPIFPTFLILIGLWVATIVSIV KLRKILPAEDTGAKSQLLGSKA >gi|227860828|gb|ACLH01000092.1| GENE 27 27289 - 27711 527 140 aa, chain + ## HITS:1 COG:no KEGG:cauri_1836 NR:ns ## KEGG: cauri_1836 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 1 140 140 266 100.0 2e-70 MKNTLIYSCIGVLAAVPLADALLPDPSPDTTPVRGIPGLECPEDPYASSQTWNCGSATII SEEGSSSREVETYLPRQHRSFTWTRALTDAPITTQAAELYRVSDGDGITLSQRHNNTISF LHIYGPKASDFADRVQPEDA >gi|227860828|gb|ACLH01000092.1| GENE 28 27708 - 28466 727 252 aa, chain + ## HITS:1 COG:no KEGG:cauri_1837 NR:ns ## KEGG: cauri_1837 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 242 1 242 252 427 100.0 1e-118 MKYLYYLLTLGALAVTAFHYAGEPFLPASALAAVIFAAVLVCLTLFFLRRRPGIAHGVVW GFAVSGLAVELNTNMTHLLARAGLDWLGAAGFAPFTEEVLKFLGVLLICTCVIRPHSWLD YVFVGVAVGIGFTVGEDATAFARMTADNLDSDTAGAIGAVVIRLASNPLSHSLFAGLSAY GLSQKQPVRWLIIAIAVHATKNLFPSLSTALDDAIWPLLVGMVVVLAEWVATIWGTIALR KKAAAHPAPARA >gi|227860828|gb|ACLH01000092.1| GENE 29 28414 - 29769 1224 451 aa, chain - ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 31 405 4 376 394 241 34.0 2e-63 MKMAPRHRQQLPPLPMVSAKLGERLASQVFVEEGRELLPELQAFRRDMHQNPEVGLHLPR TQEKVLEALKGLPLEIQLGRDLSSVVAVLRGGKRGERPVSVLLRADMDALPVREQTGSPF ASTNSNMHACGHDLHTAALIGAVKMLCRHREELLGDVTFMFQPGEEGPGGAQPMIDEGVL DAAGRRPIAAYGLHVGPQDRGTFHHIAGPMMASSSNLGITVYGKGGHGSRPHDAIDPVAA LAEIQVALQVALTRRFDANSPIVITVTNLRAGDGAVNVIPDKAELGATVRVLRDEHIDAV RQMIIEVSSSVAASHRCTAKVDFEVLYSATKTSAREDQFAASLWAGMFGAENVLTMDTPM MASEDFGAVLSQVPGTFMWFGTGDPHTPEHMREWNHSPQVRFDDSVLGDQAAALAAVAFE RLAAEDAHPSPATKAMRAPVQDAQPPSSAAQ >gi|227860828|gb|ACLH01000092.1| GENE 30 29832 - 30914 1003 360 aa, chain + ## HITS:1 COG:Cgl1002 KEGG:ns NR:ns ## COG: Cgl1002 COG0627 # Protein_GI_number: 19552252 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 34 360 77 411 411 269 45.0 8e-72 MKLLSALLSSALLMSSAPAYQESSRDEQSSRWGVDATFSIINAMGSSSHLLTDLFTSKQE GYPYPVDASISTASVVSRTPTDEPGREKWMVASPSMGREIPVDVVVGNGGPVVYFLEGVD SPETSNWITKGHLKRVFGDSDASIVIPSQGAGSMWTDWNQDDPKLGRHKWNTFVTQELAP VVEAELNHNGKRGIIGLSMGASGAVMMANNHPGFFDAVAGISGCYSTTSTVGQGTVDLTV GSLGGNPRNMWGPHGSPDWVRNDVAANPAGLRGTALYLSAASGAWSDEEMAAYANKSLDD RIGGTLLEAGSKRCTEEFSAALDDASLPHTTDYLDTGVHDWVMFGKQLQPAWDAIKPALY Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:07:01 2011 Seq name: gi|227860827|gb|ACLH01000093.1| Corynebacterium aurimucosum ATCC 700975 contig00174, whole genome shotgun sequence Length of sequence - 98491 bp Number of predicted genes - 113, with homology - 109 Number of transcription units - 35, operones - 23 average op.length - 4.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 480 - 689 296 ## cauri_1841 hypothetical protein 2 2 Tu 1 . - CDS 947 - 2794 2762 ## COG0481 Membrane GTPase LepA + Prom 2682 - 2741 1.7 3 3 Tu 1 . + CDS 2813 - 3334 465 ## cauri_1843 hypothetical protein + Term 3388 - 3423 0.2 4 4 Op 1 . + CDS 3453 - 3716 417 ## PROTEIN SUPPORTED gi|227833668|ref|YP_002835375.1| 30S ribosomal protein S20 5 4 Op 2 . + CDS 3717 - 4526 842 ## COG0338 Site-specific DNA methylase 6 4 Op 3 . + CDS 4519 - 5697 1228 ## cauri_1846 hypothetical protein 7 5 Op 1 . - CDS 5778 - 6386 555 ## COG1280 Putative threonine efflux protein 8 5 Op 2 . - CDS 6416 - 6784 517 ## COG0666 FOG: Ankyrin repeat 9 5 Op 3 10/0.000 - CDS 6796 - 7734 843 ## COG1466 DNA polymerase III, delta subunit 10 5 Op 4 7/0.000 - CDS 7740 - 8990 982 ## COG0658 Predicted membrane metal-binding protein 11 5 Op 5 1/0.091 - CDS 8987 - 9589 567 ## COG1555 DNA uptake protein and related DNA-binding proteins 12 5 Op 6 1/0.091 - CDS 9675 - 10463 873 ## COG1307 Uncharacterized protein conserved in bacteria 13 5 Op 7 6/0.000 - CDS 10463 - 11161 577 ## COG0406 Fructose-2,6-bisphosphatase 14 5 Op 8 14/0.000 - CDS 11158 - 11625 667 ## COG0799 Uncharacterized homolog of plant Iojap protein 15 5 Op 9 . - CDS 11720 - 12337 722 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 16 5 Op 10 . - CDS 12330 - 13187 654 ## cauri_1856 putative secreted protein 17 5 Op 11 . - CDS 13197 - 14117 1266 ## cauri_1857 putative secreted protein - Term 14167 - 14235 16.0 18 6 Op 1 . - CDS 14296 - 15687 756 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 19 6 Op 2 . - CDS 15791 - 17059 1590 ## COG0014 Gamma-glutamyl phosphate reductase 20 6 Op 3 . - CDS 17134 - 17640 512 ## cauri_1860 hypothetical protein 21 6 Op 4 2/0.000 - CDS 17640 - 18545 1318 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 22 6 Op 5 . - CDS 18559 - 19476 1033 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 23 6 Op 6 7/0.000 - CDS 19488 - 20720 1667 ## COG0263 Glutamate 5-kinase 24 6 Op 7 14/0.000 - CDS 20740 - 22266 1828 ## COG0536 Predicted GTPase - Term 22377 - 22410 4.1 25 6 Op 8 32/0.000 - CDS 22427 - 22705 460 ## PROTEIN SUPPORTED gi|227833689|ref|YP_002835396.1| 50S ribosomal protein L27 26 6 Op 9 4/0.000 - CDS 22749 - 23054 501 ## PROTEIN SUPPORTED gi|227833690|ref|YP_002835397.1| 50S ribosomal protein L21 - Prom 23131 - 23190 1.7 - Term 23134 - 23186 2.4 27 6 Op 10 . - CDS 23255 - 26443 3416 ## COG1530 Ribonucleases G and E + Prom 26487 - 26546 6.2 28 7 Tu 1 . + CDS 26666 - 27403 769 ## cauri_1868 hypothetical protein 29 8 Tu 1 . - CDS 27400 - 28464 1041 ## COG0798 Arsenite efflux pump ACR3 and related permeases - Prom 28503 - 28562 3.6 + Prom 28371 - 28430 1.7 30 9 Tu 1 . + CDS 28506 - 28928 207 ## COG0640 Predicted transcriptional regulators + Term 28997 - 29029 5.4 - Term 28977 - 29028 7.8 31 10 Op 1 . - CDS 29048 - 29458 683 ## COG0105 Nucleoside diphosphate kinase 32 10 Op 2 . - CDS 29518 - 29829 421 ## gi|262184702|ref|ZP_06044123.1| hypothetical protein CaurA7_11964 33 10 Op 3 . - CDS 29835 - 30719 748 ## COG0657 Esterase/lipase 34 10 Op 4 . - CDS 30729 - 31175 730 ## cauri_1873 hypothetical protein 35 10 Op 5 8/0.000 - CDS 31172 - 32701 1966 ## COG0285 Folylpolyglutamate synthase 36 10 Op 6 . - CDS 32701 - 35439 3952 ## COG0525 Valyl-tRNA synthetase + Prom 35377 - 35436 1.7 37 11 Op 1 19/0.000 + CDS 35497 - 36318 945 ## COG0413 Ketopantoate hydroxymethyltransferase 38 11 Op 2 . + CDS 36329 - 37150 889 ## COG0414 Panthothenate synthetase 39 12 Tu 1 . - CDS 37147 - 38109 1285 ## COG0039 Malate/lactate dehydrogenases - Prom 38171 - 38230 3.5 40 13 Op 1 . + CDS 38057 - 38242 118 ## 41 13 Op 2 . + CDS 38285 - 39028 787 ## COG1309 Transcriptional regulator - Term 39280 - 39314 4.5 42 14 Op 1 . - CDS 39364 - 40995 974 ## COG1109 Phosphomannomutase 43 14 Op 2 7/0.000 - CDS 40997 - 41653 656 ## COG0274 Deoxyribose-phosphate aldolase 44 14 Op 3 . - CDS 41681 - 43123 1206 ## COG0213 Thymidine phosphorylase + Prom 43025 - 43084 3.0 45 15 Op 1 . + CDS 43173 - 43607 267 ## COG0295 Cytidine deaminase 46 15 Op 2 . + CDS 43626 - 44846 1254 ## COG1972 Nucleoside permease + Term 44854 - 44900 7.1 47 16 Tu 1 . - CDS 44898 - 45833 341 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Term 45860 - 45907 12.1 48 17 Tu 1 . - CDS 45924 - 47219 260 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 - Prom 47254 - 47313 3.8 + Prom 47202 - 47261 3.2 49 18 Op 1 9/0.000 + CDS 47419 - 48723 1699 ## COG0477 Permeases of the major facilitator superfamily 50 18 Op 2 . + CDS 48765 - 49535 990 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 49547 - 49585 6.2 51 19 Op 1 5/0.000 - CDS 49589 - 50212 966 ## COG0740 Protease subunit of ATP-dependent Clp proteases 52 19 Op 2 . - CDS 50234 - 50833 889 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 51002 - 51061 2.5 53 20 Tu 1 . + CDS 50972 - 51652 358 ## COG1321 Mn-dependent transcriptional regulator + Term 51718 - 51753 2.1 54 21 Tu 1 . - CDS 51737 - 51946 97 ## gi|227504049|ref|ZP_03934098.1| hypothetical protein HMPREF0308_0319 + Prom 51691 - 51750 3.7 55 22 Op 1 18/0.000 + CDS 51882 - 52235 317 ## COG1780 Protein involved in ribonucleotide reduction 56 22 Op 2 24/0.000 + CDS 52286 - 54481 1597 ## COG0209 Ribonucleotide reductase, alpha subunit 57 22 Op 3 . + CDS 54533 - 55558 742 ## COG0208 Ribonucleotide reductase, beta subunit 58 22 Op 4 . + CDS 55539 - 55814 107 ## cauri_1895 hypothetical protein 59 22 Op 5 . + CDS 55854 - 56435 689 ## COG0431 Predicted flavoprotein - Term 56502 - 56554 7.7 60 23 Op 1 . - CDS 56609 - 57964 2104 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 58162 - 58221 2.0 - TRNA 58038 - 58111 86.2 # Pro TGG 0 0 - Term 58110 - 58148 4.4 61 23 Op 2 . - CDS 58249 - 59067 795 ## cauri_1898 putative secreted protein - Prom 59270 - 59329 77.4 + TRNA 59255 - 59329 67.6 # Gly TCC 0 0 - Term 59324 - 59372 7.1 62 24 Op 1 . - CDS 59427 - 59873 533 ## cauri_1967 hypothetical protein 63 24 Op 2 . - CDS 59889 - 60356 619 ## cauri_1968 hypothetical protein - Prom 60390 - 60449 2.9 - Term 60675 - 60716 5.2 64 25 Op 1 . - CDS 60739 - 61161 357 ## cauri_1969 hypothetical protein 65 25 Op 2 . - CDS 61151 - 61561 332 ## cauri_1970 hypothetical protein 66 25 Op 3 . - CDS 61564 - 61929 432 ## cauri_1971 hypothetical protein 67 25 Op 4 . - CDS 61930 - 62748 587 ## cauri_1972 hypothetical protein - Term 62761 - 62790 1.9 68 26 Op 1 . - CDS 62802 - 63668 751 ## cauri_1973 hypothetical protein 69 26 Op 2 . - CDS 63661 - 64731 870 ## cauri_1974 hypothetical protein - Prom 64774 - 64833 1.5 70 27 Op 1 . - CDS 64892 - 68353 1880 ## cauri_1975 hypothetical protein 71 27 Op 2 . - CDS 68347 - 69165 498 ## gi|262184738|ref|ZP_06044159.1| hypothetical protein CaurA7_12144 72 27 Op 3 . - CDS 69177 - 76004 7455 ## COG5283 Phage-related tail protein 73 28 Tu 1 . - CDS 76400 - 76846 514 ## cauri_1977 hypothetical protein - Term 76945 - 76980 0.2 74 29 Op 1 . - CDS 77019 - 77636 764 ## cauri_1978 hypothetical protein 75 29 Op 2 . - CDS 77646 - 78110 401 ## cauri_1979 hypothetical protein 76 29 Op 3 . - CDS 78111 - 78461 270 ## cauri_1980 hypothetical protein 77 29 Op 4 . - CDS 78458 - 78832 191 ## cauri_1981 hypothetical protein 78 29 Op 5 . - CDS 78817 - 79266 293 ## cauri_1982 hypothetical protein - Term 79308 - 79372 0.1 79 30 Op 1 . - CDS 79432 - 80340 1156 ## cauri_1983 hypothetical protein 80 30 Op 2 . - CDS 80353 - 81030 955 ## cauri_1984 hypothetical protein 81 30 Op 3 . - CDS 81112 - 83097 952 ## cauri_1985 hypothetical protein 82 30 Op 4 . - CDS 83101 - 84675 1097 ## cauri_1986 hypothetical protein 83 31 Op 1 . - CDS 84887 - 87142 747 ## cauri_1987 putative phage terminase 84 31 Op 2 . - CDS 87135 - 87557 377 ## cauri_1988 hypothetical protein 85 31 Op 3 . - CDS 87616 - 87924 182 ## cauri_1989 hypothetical protein 86 31 Op 4 . - CDS 87959 - 88171 230 ## gi|262184755|ref|ZP_06044176.1| hypothetical protein CaurA7_12229 87 31 Op 5 . - CDS 88168 - 88353 174 ## cauri_1990 hypothetical protein 88 31 Op 6 . - CDS 88353 - 88979 675 ## cauri_1991 putative transcriptional regulator 89 31 Op 7 . - CDS 89011 - 89187 125 ## 90 31 Op 8 . - CDS 89127 - 89756 444 ## COG0223 Methionyl-tRNA formyltransferase 91 31 Op 9 . - CDS 89757 - 90872 301 ## COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain 92 31 Op 10 . - CDS 90945 - 91562 684 ## cauri_1994 hypothetical protein 93 31 Op 11 . - CDS 91609 - 91848 126 ## gi|262184761|ref|ZP_06044182.1| hypothetical protein CaurA7_12259 94 31 Op 12 . - CDS 91845 - 92270 237 ## cauri_1995 hypothetical protein 95 31 Op 13 . - CDS 92270 - 92461 261 ## cauri_1996 hypothetical protein 96 31 Op 14 . - CDS 92561 - 92833 388 ## cauri_1997 hypothetical protein 97 31 Op 15 . - CDS 92925 - 93356 464 ## COG0756 dUTPase 98 31 Op 16 . - CDS 93363 - 93569 252 ## cauri_1999 hypothetical protein 99 31 Op 17 . - CDS 93610 - 93846 224 ## cauri_2000 hypothetical protein 100 31 Op 18 . - CDS 93876 - 93986 98 ## cauri_2001 hypothetical protein 101 31 Op 19 . - CDS 94043 - 94369 114 ## gi|262184769|ref|ZP_06044190.1| hypothetical protein CaurA7_12299 102 31 Op 20 . - CDS 94369 - 94521 102 ## gi|262184770|ref|ZP_06044191.1| hypothetical protein CaurA7_12304 103 31 Op 21 . - CDS 94529 - 94711 109 ## cauri_2002 hypothetical protein 104 32 Op 1 . - CDS 94875 - 95135 418 ## cauri_2004 hypothetical protein 105 32 Op 2 . - CDS 95195 - 95389 401 ## cauri_2005 hypothetical protein - Prom 95421 - 95480 5.2 106 33 Op 1 . - CDS 95482 - 95958 432 ## cauri_2006 hypothetical protein 107 33 Op 2 . - CDS 95955 - 96521 191 ## cauri_2007 hypothetical protein - Prom 96617 - 96676 2.6 108 34 Op 1 . + CDS 96451 - 96630 107 ## 109 34 Op 2 . + CDS 96663 - 96878 100 ## - Term 96863 - 96896 4.0 110 35 Op 1 . - CDS 96923 - 97387 459 ## COG0629 Single-stranded DNA-binding protein 111 35 Op 2 . - CDS 97460 - 97894 293 ## cauri_2009 putative secreted protein 112 35 Op 3 . - CDS 97912 - 98136 211 ## gi|262184780|ref|ZP_06044201.1| hypothetical protein CaurA7_12354 113 35 Op 4 . - CDS 98174 - 98476 322 ## cauri_2010 hypothetical protein Predicted protein(s) >gi|227860827|gb|ACLH01000093.1| GENE 1 480 - 689 296 69 aa, chain + ## HITS:1 COG:no KEGG:cauri_1841 NR:ns ## KEGG: cauri_1841 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 69 1 69 69 121 100.0 1e-26 MTNPVSAWKIVPAIAVVGGFLLLILYVGLSRYYNTQELAMLIEGANANGQNYSVTIHNQL TGSYSFNAE >gi|227860827|gb|ACLH01000093.1| GENE 2 947 - 2794 2762 615 aa, chain - ## HITS:1 COG:Cgl2290 KEGG:ns NR:ns ## COG: Cgl2290 COG0481 # Protein_GI_number: 19553540 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Corynebacterium glutamicum # 1 613 1 613 615 1132 89.0 0 MSTNFAATTFTDPSKIRNFCIIAHIDHGKSTLADRILQLSQVVEERDMRDQYLDNMDIER ERGITIKAQNVRLPWIPRSGEFEGQEIVMQMIDTPGHVDFTYEVSRALEACEGAILLVDA AQGIEAQTLANLYLAMENDLEIIPVLNKIDLPAADPEKYALEIAHIIGCEPEEVLRVSGK TGEGVPELLDKVAELIPAPTSEFGEDAPARAMVFDSVYDTYRGVVTYIRMMDGKLTPRQK VTMMATGTNHELLEVGIVSPTMQKCKGLGPGEVGYLITGVKNVRETKVGDTITWASNGAS EPLKGYADPNPMVYSGLFPISQADFPDLRDALEKLQLNDASLTFEPETSVALGFGFRCGF LGLLHMEITRDRLEREFGLDLISTAPSVTYRVVAEDGEESMVHNPSDWPGGKLREVYEPI VKMTIIVPEEFVGSTMELCQSKRGQMGGMDYLSEDRVELRYTMPLGEIIFDFFDMLKSRT KGYASLNYEEAGEQLADLVKVDILLNGDPVDAFSAIVHRDSAQWYGNKMTKKLKELIPRQ QFEVPVQAAIGSKIIARENIRAMRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKSIGSVS VPQEAFVAALSTDAE >gi|227860827|gb|ACLH01000093.1| GENE 3 2813 - 3334 465 173 aa, chain + ## HITS:1 COG:no KEGG:cauri_1843 NR:ns ## KEGG: cauri_1843 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 173 1 173 173 334 100.0 9e-91 MSRLARILGIGGPEPVDVGLERITEGLGLNQNDSVTEPRKAADIRVECAAAHPRSVFFTP DMDGQADSGEVVWVWAPSDGKQSPPRERAVLIVSRTRTTVLGLLISSNPGHANKEEWLDI GTGEWDESGRQCWVRMDRVLEISEEQCRRQGTLFPERRFERIANRLRSRYHWA >gi|227860827|gb|ACLH01000093.1| GENE 4 3453 - 3716 417 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227833668|ref|YP_002835375.1| 30S ribosomal protein S20 [Corynebacterium aurimucosum ATCC 700975] # 1 87 1 87 87 165 100 1e-39 MANIKSKQKRILTNEKSRQRNKSVRSAVRTEIRKFREAVAAGDKAAAEKQLRVASRALDK SVSKGVFHRNTAANKKSGMATAFNKMA >gi|227860827|gb|ACLH01000093.1| GENE 5 3717 - 4526 842 269 aa, chain + ## HITS:1 COG:all0061 KEGG:ns NR:ns ## COG: all0061 COG0338 # Protein_GI_number: 17227557 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Nostoc sp. PCC 7120 # 2 268 12 277 277 243 45.0 4e-64 MKPLLKWVGGKRQLLPVIHSVLPESFDTYVEPFLGGGAVLFSLAPERARVNDLNTELITV YEVVRDNVDELIALLKGYPNDSEFFYEMRARDREPGFAHLSPVERAARTIYLNKTCYNGL YRVNNAGQFNAPFGRYANPKICDEPNLRAVSEYLSSHNVTFYNGDYAAVEANEGDFVYFD PPYDPVNPTSNFTGYQSGGFGRADQIRLKETCDDLNARGVKFLLSNSATDFIKELYADYH IDIVGATRAVNSVASKRGKVDEVLVRNYA >gi|227860827|gb|ACLH01000093.1| GENE 6 4519 - 5697 1228 392 aa, chain + ## HITS:1 COG:no KEGG:cauri_1846 NR:ns ## KEGG: cauri_1846 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 392 8 399 399 741 100.0 0 MLNDAAWDLVYPHIAADIADQGFAVLPAAKLKELSGREPRLMAKHDFSAARPEVFRQHGL SMLPIRRDAYLIGRFDLYQPFPEQAGPLKSMPVPRHIQSIDFENLTSEAAALTAASLSGM LDDFLGGELVPTVSGRMSTLRLPMRVGGRDIEVDRAQMEIDAGFESAEHLVLVEAKNHLS PDFNIRQLYFPFRRFSLALEKDVVPVYLVYSNGIFHFYRYAFRQPEDFRSIELVSAARYV LGESGLTEATVRAVLARTQVEDTRVPFPQADSFARVISLLENPVDKAEMPEEFGFTPRQA DYYTNAARYLGLSKLNGTRDERNLTLIEALACRPVFRDMVRHVVDTGRAVDKEEAMVFMR AADLGLGETTLRRRSATVAAWSQWLAELLEQA >gi|227860827|gb|ACLH01000093.1| GENE 7 5778 - 6386 555 202 aa, chain - ## HITS:1 COG:Cgl2293 KEGG:ns NR:ns ## COG: Cgl2293 COG1280 # Protein_GI_number: 19553543 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Corynebacterium glutamicum # 1 199 12 218 223 152 41.0 5e-37 MNLVGAAAPGPDIVLVTRYATRSRRHAIAAATGIQVGVLFWCTLTVFGAAALLTAFPGVL SLIQVIGGCFLVFMGVLSIRSGLELRKQPPVDEEEAAARLGSVGKVFRTGLATNLSNPKI VLFLAAMVAPLLPPHPPVWVSVALVLSLSLSSYLLFVFLSTVISTRAIRRRLLAAGPWID IASGVFFVVAGCALVWAGIQAT >gi|227860827|gb|ACLH01000093.1| GENE 8 6416 - 6784 517 122 aa, chain - ## HITS:1 COG:Cgl2294 KEGG:ns NR:ns ## COG: Cgl2294 COG0666 # Protein_GI_number: 19553544 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Corynebacterium glutamicum # 2 121 8 131 133 128 55.0 3e-30 MDDIQNFATKLFDFARNGDVTLLEYIKQGVNVDMVNQDGQSFIMLASYHGHAELVRQLAA AGADVNLLNDRGQSPLAGAIFKKEDAVIDALLAAGANPTAGQPNALDSARMFGREDLLER LS >gi|227860827|gb|ACLH01000093.1| GENE 9 6796 - 7734 843 312 aa, chain - ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 6 312 18 330 331 299 54.0 6e-81 MSSAPVHLILGDDEFLAERARLSIQHGEVTKLKASEVSEGEILEATSPSLFGEDRVIVIS DVERAGKEVTKILLDACANPMPGITLILLYSVTAKTLKKKKKPPELIAALRKTAEVHEVF SLYPNELAQWATREFASHGVRPTPDVVQALLDGVGSDLRELASAISQLVFDTGGKVTREA VHAYYVGVAEVANWDIADAAVAGRVEAAVSTCRRALQLGASPVAIASALANKVGNIARLY SARGDQYSLASQTGMAPYAVKLTQPVARRWSGENITKAVILMTELDAAVKGQGGDESFAI EAAVKRVAELAR >gi|227860827|gb|ACLH01000093.1| GENE 10 7740 - 8990 982 416 aa, chain - ## HITS:1 COG:Cgl2296 KEGG:ns NR:ns ## COG: Cgl2296 COG0658 # Protein_GI_number: 19553546 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Corynebacterium glutamicum # 1 388 1 419 554 242 44.0 1e-63 MRELRLVPAAVVAWLATLSVLFGHPWLLCGLVLFAFARGQWRGQGILCVASGVIFATLTY VRSVRAAAFHFGSEVTGKLTADPIQTASGWMVRLRVPGYPAQLPVFLKEKPEAFGGSLVT VHGHPGPSDQVGVGTTVFSGELTAHSHSWTAAVADNFRAVCDNGLIPGMVLGDTSLQSPE DQQLYIDTGLSHLSAVSGSNVAIVCTAAALVVSGQRVRVGASASALALFVALVGWEPSVQ RATVAGLAGLVAVLNSSRMEPLHALSLGVLFLLAADSDLAVSFGFALSVAATAGIVVLSP LLLRVLGTGIVARAFAVAIAADIVTMPLIALMTGRVSVVSVIANVLVAPVVPVITVVGLI AAALAQVGLGRPLVILIEPLADWIHLVASAMPVTTVAAGPVAMLLFCGWVIAALLR >gi|227860827|gb|ACLH01000093.1| GENE 11 8987 - 9589 567 200 aa, chain - ## HITS:1 COG:Cgl2297 KEGG:ns NR:ns ## COG: Cgl2297 COG1555 # Protein_GI_number: 19553547 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Corynebacterium glutamicum # 4 200 5 217 217 115 44.0 6e-26 MNAIADRLRDLTRPTGEEELLNVDFPRVRVPPWLALVAAGVAGVALLAWLGMSRSAENPY EVAAPSSEVAADIVVSVVGEVEQPGLVTLAPGARINDALEVARPRVPTDNLNLAQKLNDG EQITVGGPPNAPDAAGEGLVSLNAASEEELTELPGIGPATAAAIIAHREEVGSFTTVEQL MDVSGIGPAKFAQLKDKVRP >gi|227860827|gb|ACLH01000093.1| GENE 12 9675 - 10463 873 262 aa, chain - ## HITS:1 COG:Cgl2298 KEGG:ns NR:ns ## COG: Cgl2298 COG1307 # Protein_GI_number: 19553548 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 2 262 3 260 274 255 59.0 5e-68 MIRVVTDSAAGLPADIVEELDICVVDLHVMESHGKDGAELSTSGLTALELAALYGRQMER SGDDGVLAIHLSKELSSTWSAAVTASGVFPDTVRVIDSGTAGMAMGAAAMAAAKLAQEGA SLDECYAAAINTLERGHTWVYLNSTEELRRSGRMSAATAMLSTALLATKPIMAIQGGKLE MVGKTRTQTKAFTKLVDLVASRAEGNPAFIAVQYNEDKVSARRLEDLLRLALPDSSFMLV PLTDVLSVHVGPGAIGVSAVFS >gi|227860827|gb|ACLH01000093.1| GENE 13 10463 - 11161 577 232 aa, chain - ## HITS:1 COG:Cgl2299 KEGG:ns NR:ns ## COG: Cgl2299 COG0406 # Protein_GI_number: 19553549 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 1 221 1 233 236 266 60.0 3e-71 MTRRLLLIRHGQTTYNATGRMQGHLDTELSDVGYSQARAAADLLEGKDITAIVSSDLIRA RETAEIIARGLGLEVSVDKRLRETHLGEWQGMTSAEVDEQFPGARALWRHDPTWAPPQGE SRVDVANRARPVIDELMQKHSQWDEGAVLVVAHGGAISALTCHLLGLEHHQYGILSGLKN THWSQLTARPEFDAARPLSPLEFTPENVSRAQWYFDGWNMGGAVVGGAGADV >gi|227860827|gb|ACLH01000093.1| GENE 14 11158 - 11625 667 155 aa, chain - ## HITS:1 COG:Cgl2300 KEGG:ns NR:ns ## COG: Cgl2300 COG0799 # Protein_GI_number: 19553550 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Corynebacterium glutamicum # 1 153 1 157 157 167 64.0 8e-42 MSITDEARQMAETAALAADEKLATNIAAIEVSDVLAITEVFVLASADTERQVGSIVEEVE DELTKKGFEPKRREGNRENRWVLLDYGPIVVHVQRNDQREFYGLDRLYHDCPLLDIPGLD TPERPGEWSNEVNPRDVDSIDEIPLAQPEPEDDEL >gi|227860827|gb|ACLH01000093.1| GENE 15 11720 - 12337 722 205 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 6 199 10 203 218 298 72.0 6e-81 MTSPQRIGIMGGTFDPIHNGHLVAASEVAHRFRLDTVVFVPTGQPWQKADKQVTAAEHRY LMTMVATASNPRFTVSRVDIDREGPTYTIDTLRDLRGIFPDAELFFITGADSVASIMSWR NWEEMLEMAHFVGVTRPGYELRKDMLPEDSQDDIELIEIPAMAISSTDCRARAQQGQPVW YLVPDGVVQYIAKNHLYSPHPEKPL >gi|227860827|gb|ACLH01000093.1| GENE 16 12330 - 13187 654 285 aa, chain - ## HITS:1 COG:no KEGG:cauri_1856 NR:ns ## KEGG: cauri_1856 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 285 1 285 285 552 100.0 1e-156 MKSLSFRVSCVAAALGTAASLLSAPVASAGGVETCPETVVLVARGSDQNEEQGEYVGPQR YSAHAPESTGFEGRNFAALFHQVEQRHPGAMDDVYVLALDPEAYPAAMNLPPLAQEGEDL GPLQLVQRALGILQQHSLGEMAYSVTFGAIDSLRTGARNAPKVVDNYETTTGCHPRWVAA GYSQGALVATSVESYLAETGRLQAMLTFGNPLHQVPWAKNRAGLPGNRSVDYCLDGDFVC DFSLDAANRALATKAERHASYFLGEPSEQDVQVIDSVAGILTSHD >gi|227860827|gb|ACLH01000093.1| GENE 17 13197 - 14117 1266 306 aa, chain - ## HITS:1 COG:no KEGG:cauri_1857 NR:ns ## KEGG: cauri_1857 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 6 306 1 301 301 540 100.0 1e-152 MVPSPMLSRIASSVAAAVMAVSAIIVPQTISAAAAHADEQCPAVVVVAARGSGQNGQVYP TQYSNQGGRASNGWEGESIRAMLQGAEARYQATHGGNSLMKDVYVLGLEPQYYPATYPEY SVPNESVPNTAADLVRLATQYANPVINTAVSAINQFLYSVQTGKRGVTSAINSYEAATGC HPQYILSGYSQGAMILANHEAELAHRGQLAGVVTFGNPLTRAGDPAVVGATQGAGGPMGH FPQLRANVSRVDYCLPLDAVCDLSAHTLYAAKPTGGSHGQYFFTNHQWDNQVYDSIGRMV DSVRFR >gi|227860827|gb|ACLH01000093.1| GENE 18 14296 - 15687 756 463 aa, chain - ## HITS:1 COG:MA2369 KEGG:ns NR:ns ## COG: MA2369 COG2865 # Protein_GI_number: 20091201 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 14 412 8 400 510 98 27.0 2e-20 MSAQRNFHKEPQLLLSVPEDQWFDRKSFRIKPKDLAKTIVGMANAEGGVVAVGITDREFD GRPTAGQGNDLRQTALDHTDPTVRVRIEILEINEDVEVFLFHVLPSERVHYLKSGECYLR VGDESRHLKADDILELRYTKGEQQYDATVPAHASPDDLDMSLVEDYADIIGSASGADSLR ARNLIDRQGRPRSAALLLFGKNPQEFFPNAHIRVLRFAEDERLPGQQQQLVEDYRFDGPV PEQIRAAQQVIGEMLPTVRRLSGAGLFEDENLIPHDVWLEGLVNAVVHRSYSMAGDHIRF EVYPSRIEISSPGRFPGLVDPAKPESIARFARNPLIARVTAELRIGQELGEGIRRMFAGM RRVGFADPSYMQTSGSVVLTLKAIQRLNEQVLKDLPRHSEGALAALETSARPMSTGEVAE ALGVSIPSVRRALQAMRGKGLVKWRGNGPRDPRAVWFVEGPFG >gi|227860827|gb|ACLH01000093.1| GENE 19 15791 - 17059 1590 422 aa, chain - ## HITS:1 COG:Cgl2303 KEGG:ns NR:ns ## COG: Cgl2303 COG0014 # Protein_GI_number: 19553553 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Corynebacterium glutamicum # 1 422 11 432 432 570 73.0 1e-162 MSNTEREEVLSKARAAKAVAPQFAQLPTPRKNEILNRAAENLIAHTEDILAANQLDIEAG RANGMSESLIDRLSLDAARIEGIAGGLRQVASLQDPVGEILQGRTMDNGIQMKQVRVPLG VMGMVYEARPNVTVDAFGLALKSGNVPLLRGSKSAKNSNAKLVELLQDTLMEFDLPREGV QLLPCETHDSVQDLITARGLVDLVIPRGGARLINAVVENATVPAIETGTGNCHFYVDASA DLDKAIDMVINGKTRRTSVCNATEGVLIDAALDDASKLRIITALQEAGVTIHSDVKELEA FGVKDAVEATDEEWREEFLSMDICAKVVDGVDGAIAHIAEYTTGHTEAIAAQDADVLLTF ANEVDAAAVMLNASTAFTDGEVYGMGAEIGISTQKLHARGPMALPELTSTKWVLQGTGQT RP >gi|227860827|gb|ACLH01000093.1| GENE 20 17134 - 17640 512 168 aa, chain - ## HITS:1 COG:no KEGG:cauri_1860 NR:ns ## KEGG: cauri_1860 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 151 1 151 168 273 100.0 2e-72 MENPDIRVGDAERSAALEQLSQHFVNGTLGPDEFEQRTGEAAAARTRGDVEKLFADLPEL STPSATTPARRHEAELEDMLARGRKVQMADSVIWSVAMIALFLGLFVFDWSYFWISPVIA FFASWAARGVLKFSESDEELFDELSEGEKKKRAERLRAAAERRRELEA >gi|227860827|gb|ACLH01000093.1| GENE 21 17640 - 18545 1318 301 aa, chain - ## HITS:1 COG:Cgl2304 KEGG:ns NR:ns ## COG: Cgl2304 COG0111 # Protein_GI_number: 19553554 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Corynebacterium glutamicum # 1 301 1 304 304 290 51.0 2e-78 MKYAIEPHPWEETIEVLDAAGFERAPLDEASFLIYTGNGTDFPDPLPENIGFVQIPSAGV DHVLDAMKTTTVPWSNAAGVYDNTVAESTIALLLAQLHAHRRVNGTFDSYAEMEAHTSYL YDDKTVAIIGAGGIGKRLISMLSGFGPRLIAVNRSGNPVEGAEETYPISQVEKVWPKADY FVLIAPLTPETRHMVDAEAFKQMPEHAVVVNVGRGPLIKTEDLVAALEAGEIAGGALDVT DPEPLPEDHPLWQDKRVVITPHIANTQRSVREKIGAHTIKVAKAFAAGEELPTLVDPKAG Y >gi|227860827|gb|ACLH01000093.1| GENE 22 18559 - 19476 1033 305 aa, chain - ## HITS:1 COG:Cgl2304 KEGG:ns NR:ns ## COG: Cgl2304 COG0111 # Protein_GI_number: 19553554 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Corynebacterium glutamicum # 1 305 5 304 304 251 44.0 1e-66 MGPDVWAATVADIDAAGHQRVGSLEEAEVFVNTASDPAQTPEIPENIQWVQYCFTGVNRH IEAGLIRRDGLPWCNSAGAFAKPVAESALGLMLSQAHHHKAFALAKSWSVARELDESQAW LYEQQGPTRVLIVGAGGIGKQLMAYLAPFGAHITAVNRSGRPVDGADATLPIERIDEAWG EADFVVSILPATAATEALFDAAVFRAMKRSAVFINVGRGSTVVTDDLVDALRTGEIAGAG LEVMDPEPLPDGHPLYDLPNATLTPHMAASDHVAQYHLGAIFNANAAAWERGEEMPTRVD PDAGY >gi|227860827|gb|ACLH01000093.1| GENE 23 19488 - 20720 1667 410 aa, chain - ## HITS:1 COG:Cgl2305 KEGG:ns NR:ns ## COG: Cgl2305 COG0263 # Protein_GI_number: 19553555 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Corynebacterium glutamicum # 13 409 7 408 409 474 66.0 1e-133 MSSEHDNQIDYPLPLEPFEGPTPDMDYPETTTLSEKSSGFSSPLREEISKAKRIVIKIGS SSLTRDDFVTSTEKIDKIVDAVCARMNVSDIIIVSSGAVAAGMGPLGLTTRPTDLATKQA AAAVGQVHLAYEWGVSFARYNRTIGQVLLTASDVGKRDRARNAQRTIDRLRQMRTVPIVN ENDTVATSEMHFGDNDRLSALVANLVGADALFLFSDVDGLYDKNPAEPDAKFVEEVRTGK DLKAVVAGDGGKVGTGGMATKVSAARLATRGGIPVLLTSADNIGQALDDASVGTVFHTRE ERRLSAWKFWALYCADTGGSLRLDEGAMEAVVRGGNSLLAVGITDIKGEFNAGEIVDIMG PKGQVIGRGEVGYDSTTLHNLLGKQTEELPEDMRRPVVHADYLSNFASRI >gi|227860827|gb|ACLH01000093.1| GENE 24 20740 - 22266 1828 508 aa, chain - ## HITS:1 COG:Cgl2306 KEGG:ns NR:ns ## COG: Cgl2306 COG0536 # Protein_GI_number: 19553556 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Corynebacterium glutamicum # 1 508 1 501 501 660 73.0 0 MARFIDRVVLHLQAGDGGHGCASVHREKFKPLGGPDGGNGGHGGDILLEVSTQIHTLMDF HYRPHIKSERGGNGAGDWRNGARGKDLILEVPAGTVVYTEDGEMLADLTVPGTRFVAAEG GFGGLGNAALASAARKAPGFALQGEPGEARDLILELKSMADVGLVGFPSAGKSSLISVLS AAKPKIGDYPFTTLQPNLGVVDMGHESFTMADVPGLIPGAAEGKGLGLDFLRHIERTAVL AHVVDTASIEPGRDPLSDIEALETELAKYQELLEQDTGLGDLRERPRVIILNKADVPEAE ELAEFVKGDLEEKYGWPVFTISAVARKGLDPLKYKLMEMVNEHRKAQPKVAADKNHTIIQ PKSVGKKKGRFADFTVTPDPEVEGGFIVEGDKIDRWIRQTDFENDEAVGYLADRLAKAGV EEELHRQGAQEGCPVTIGDITFEYEPMAGGRATDAGRGQDGRLMSTERVSAAERKRASQA RRGLVDEFDFGTDGEVTRESANRDRWQG >gi|227860827|gb|ACLH01000093.1| GENE 25 22427 - 22705 460 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833689|ref|YP_002835396.1| 50S ribosomal protein L27 [Corynebacterium aurimucosum ATCC 700975] # 1 92 1 92 92 181 100 1e-44 MAHKKGASSSSNGRDSESKRLGVKRFGGQQVKAGEIIVRQRGTKFHPGENVGRGGDDTLF ALAAGSVEFGVKRGRRLVNIVPAEEAAAEATA >gi|227860827|gb|ACLH01000093.1| GENE 26 22749 - 23054 501 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227833690|ref|YP_002835397.1| 50S ribosomal protein L21 [Corynebacterium aurimucosum ATCC 700975] # 1 101 1 101 101 197 100 2e-49 MYAIVKTGGKQYKVAEGDLVKVEKIEGEPGSSVALTPVLLVDGATVKSKAADLEKVSVSA EIVEQGKGPKIDILKYKNKTGYKRRLGHRQPVTTLKITGIK >gi|227860827|gb|ACLH01000093.1| GENE 27 23255 - 26443 3416 1062 aa, chain - ## HITS:1 COG:Cgl2313 KEGG:ns NR:ns ## COG: Cgl2313 COG1530 # Protein_GI_number: 19553563 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Corynebacterium glutamicum # 160 992 76 914 1021 660 53.0 0 MASKKKTEEARSESTLAAAVAGIDREALAPKTRLYALAKQVGVASKELVAQFAQMGIKKS AQSSLTPEEVGQLIDALVPATETPEPAAAEGNQVVAEDADQPEGSAEDKPTKTVKKKRAK RAVKRVSKAGKKAESKEQTEEPTPEESAAQPDGAGEFQEAAPAQDAEQAAQPEQLSEEEE KLRERVRKNVDNEISQIVDKVDAEMLHEALAEAGDSDEEDDDLTPLITPMAEEDPDVYDF APVFMAPKITPLSKRQKPEEREEESEEDTAPVSQPCGRRRGSRGTSRGRGAEGRGSAREE VEHIEEPKAIKGSTRIEAQRRRRAELREKGRERQHIVSQAEFLARRESVERTMVVRDKQR TDGAGIITQVGVLEDDLLVEHFVTTETHPSQIGNIYLGRVQNVLPSMEAAFVDIGQGRNG VLYAGDIDWRALGIGGRSRKVENALKSGDQVLVQVAKDPIGHKGARLTTQISLAGRFLVY VPGGRSAGISRKLPAPERKRLKGILERVIPGDGGAIIRTAAENVSEEDIASDVNRLHSLW EDISARAAHEKATKGAKPVTLYEEPDLLIKVVRDLFNEDFSTLVVDGKRSYNTVSAYVDS MAHDLADRVVRYDAREHDGEDAFSAYRIDEQLQKALGRKVWLPSGGTLVIDRTEAMTVID VNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIVVDFIDMVLPENQDLVLRR LKEALGRDRTRHQVSEVTSLGLVQMTRKRVGTGLIETFSTECEACHGRGIIIHEYPVDED PEEENSKPQRRGRKERRAPQRDPKKHPAAVRMHRDDEDAAAEHETATEKETSRDDDSSLE ELVANVVVVDEDEPETPDSASIGYAVAESLDAKRSKPKPKSKAKRSRKPRRATRTFREPQ REETSEGSRAKHGKRDEHADAEKASPQRSEQTYEEAVEAFEKSPRRKRRTRGNSRSDIRP KREDFAQDETSAKDAQLATSKKEAKAERKGAEPGENTSVRATRSRGRRRVVRKMAQSQST PASNDREQGSEAQRRESSAQTTASKARKGGRGRRRVTRRRSR >gi|227860827|gb|ACLH01000093.1| GENE 28 26666 - 27403 769 245 aa, chain + ## HITS:1 COG:no KEGG:cauri_1868 NR:ns ## KEGG: cauri_1868 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 245 23 267 267 400 99.0 1e-110 MAQARARNEIALRDIITVAVPAGIASGLRAVDLPDPYAVPVYAVLWIAMAYGAIRIIRSK PKFVQAAQEEYRAGDYPLLAYFLPVLAIFSPLITEGIKSTGILGDISPNPILIAAGLTAF SIPAFIFGGRAFGTTSYRVGKRRIKAITEQGSLEGVTQESITAVEAHPEVLSGLVAAGAV TGNTTTIPALGQLLGYEEGLEEELRELEAAGVVKLPGFIKWSGERTFNITLTESGVRSMD AARTR >gi|227860827|gb|ACLH01000093.1| GENE 29 27400 - 28464 1041 354 aa, chain - ## HITS:1 COG:Cgl0263 KEGG:ns NR:ns ## COG: Cgl0263 COG0798 # Protein_GI_number: 19551513 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenite efflux pump ACR3 and related permeases # Organism: Corynebacterium glutamicum # 9 350 1 342 345 453 74.0 1e-127 MAVPQRPTLSFLDRFLPVWIILAMAAGLLIGHFIPGIGQALGTVEVGGISIPIAIGLLVM MYPPLAKVRYEKTKEIATDGRLMAVSLVLNWLVGPAFMFTLAWLFLADQPELRTGLIIVG LARCIAMVLEWSDLSCADREATAVLVALNSIFQVAMFGVLGWFYLRVLPGWLGLDTTSAD FSFWAIVKSVLVFLGIPFLLGALSRVWGEKAKGREWFENRFLPAVSPLAMIGLLYTIVLL FSLQGEHIVEQPATVVRVAVPLVIYFVAMFVLSLGVAKAVGMNYAQSASVAFTAAGNNFE LAIAVSIGTFGAMSAQALAGTIGPLVEIPVLVGLVYFMLWIGPKLFPGDDILPH >gi|227860827|gb|ACLH01000093.1| GENE 30 28506 - 28928 207 140 aa, chain + ## HITS:1 COG:Cgl0262 KEGG:ns NR:ns ## COG: Cgl0262 COG0640 # Protein_GI_number: 19551512 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 39 137 14 112 115 109 55.0 2e-24 MQCTARIDARQYKVRRKDNPYTDRMASSSTPETSAPGTECCSLSTGPLSDAEATHFSQQF KVLADPARLRLLSILCDEGCGPMSVTELTELTALSQPTVSHHLARLREAGLLSRQQRGRT VTHQVHKDAFMALRTLLSFD >gi|227860827|gb|ACLH01000093.1| GENE 31 29048 - 29458 683 136 aa, chain - ## HITS:1 COG:Cgl2319 KEGG:ns NR:ns ## COG: Cgl2319 COG0105 # Protein_GI_number: 19553569 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Corynebacterium glutamicum # 1 136 1 136 136 236 88.0 6e-63 MTERTLILIKPDGVKNGHVGEIISRIERKGLKLVAMDLRVADEETAKKHYAEHEDKPFFG ELVDFITSAPLVAGIIEGESAIAAWRQLAGGTHPVEKATPGTIRGDFALTVGENVVHGSD SPESAEREISIWFPNL >gi|227860827|gb|ACLH01000093.1| GENE 32 29518 - 29829 421 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184702|ref|ZP_06044123.1| ## NR: gi|262184702|ref|ZP_06044123.1| hypothetical protein CaurA7_11964 [Corynebacterium aurimucosum ATCC 700975] # 1 103 1 103 103 186 100.0 4e-46 MLFLLYGLSALLCIAALVAKLYFGGFALPLALLIPAFVFLVVGMLKQQRDERPVEFADLE EWHREELKSLLESGQYGTAVRQVQMWFRGTSHERAEEIVQHLT >gi|227860827|gb|ACLH01000093.1| GENE 33 29835 - 30719 748 294 aa, chain - ## HITS:1 COG:DRB0033_1 KEGG:ns NR:ns ## COG: DRB0033_1 COG0657 # Protein_GI_number: 10957452 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 57 278 88 321 345 169 41.0 5e-42 MYIRPELRAGAAFMSLFDPTNPLIRRAGRIMPALWPAPLIQGVRTQQVENTEIHATIYSP ENPRGAVLWIHGGGLLMGHPRQDVKHLKETAAEVGVSIIAPRYRFAPENPYPAALDDVHS AYHWLLTHAEELGIRPDRIVIGGQSAGGGLAAALCQRLHDEGGLQPAGQWLFCPMLDDRA ASTDRNPIWDADSNAQAWRFYVNGNPDAPYAVPGRRADLSGLPPAWLYAGSSELFYGEIV DYAERLRTAGVPTQCEVVDGGVHAFELWAPHTAAAKRLLMSSRVWLQSTFNTLD >gi|227860827|gb|ACLH01000093.1| GENE 34 30729 - 31175 730 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_1873 NR:ns ## KEGG: cauri_1873 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 262 100.0 3e-69 MSPRKPVPEEEIGPLGLGEAPAKDPLKQFGGMVVASSLTLELITFVLALPMLYKLYDGTL WTPFNYGVVIGFMVLLLASFPFMNKPWIVGVQIVLHVIGIVLGFMVHWSVATIFIIFALL WALAAYMRSVIVARMERGYLTTQHLTEK >gi|227860827|gb|ACLH01000093.1| GENE 35 31172 - 32701 1966 509 aa, chain - ## HITS:1 COG:Cgl2324 KEGG:ns NR:ns ## COG: Cgl2324 COG0285 # Protein_GI_number: 19553574 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Corynebacterium glutamicum # 23 509 18 507 507 554 64.0 1e-157 MAEEKGREEFEVVDALAEGTDGGPVEITDSGLTLNLGGEEDYEEAAPEQATPEELAELAQ VTAELNARAPETIIEPSLERIEMLMDLLGNPERSFHVIQVAGTNGKSSTARMIDSLLRSF HRRVGLVTSPHLQLVTERIGIDGHPIHPRDFVRIWREIKPYVEMVDSRSDIPMSTFEVLV GISYAAFADAPIDVAVVEVGLGGTWDATNVVNAEVAVVMPVGLDHTDYLGDTITEIAGEK AGIIKAREHDSEDVLTPGENIAILAEQDPEAMRVLLQRTVDVGAGVARAGSEFAALESRI AVGGQQLSIQGLGGMYEDIFLPLHGEHQAKNAAVALAAVEAFFGASAGHPLDIASVRTGF AKAISPGRLERVRTSPTTFLDACHNPHGAKALAAALDRDFDFARLIGVVSIFTDKDAAGI LTALESVLTEVVITQNTSPRARDAYELAELARDIFGEERVYVEPDLPSAYTQAVELAEDA DVQSGSGIVITGSVVTAGDARALFGKEPA >gi|227860827|gb|ACLH01000093.1| GENE 36 32701 - 35439 3952 912 aa, chain - ## HITS:1 COG:Cgl2325 KEGG:ns NR:ns ## COG: Cgl2325 COG0525 # Protein_GI_number: 19553575 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 911 4 902 903 1442 78.0 0 MTDQNKEQLVGTNRADQLPKSWEPQAVEKDLYEGWVNAGYFTPDASSEAEPYSIVLPPPN VTGQLHMGHALDHTLIDSIIRRKRMQGYATLWLPGADHAGIATQTKVEARLREQEGKKRW DYEREEFINKVWEWKEEFGGTIQNQMRAIGDSVDWSRERFTLDDGLSRAVQTIFKTLYDE GMIYQANRLVNWSPVLETAVSDIEVVYKDVEGELVSIRYGSLNDDEPHLIVATTRVETML GDVAIAVHPDDERYAHLVGQELPHPFRDDLSLKIIADDYVDMEFGTGAVKITPAHDPNDY AMGLRHDLDMPTIMDTTGHIANTGTKFDGLTREEARVEIREALREQGRIVKEIRPYVHSV GHSERSGEPIEPRLSLQWFVAVEKMAKMSGDAVREGDTTIHPKSLEPRYFEWVDDMHDWC ISRQLWWGHRIPIWYGPEGEDGQRDIVCLGPDEEAPEGYVQDPDVLDTWFSSALWPFSTM GWPEKTADLEKFFPTNVLVTAYDILFFWVARMMMFGTFAGAHTPELLGEGKNGRPQVPFT DIYLHGLVRDEQGRKMSKSLGNGIDPMDWVRDYGADALRFTLARGANPGVDLPLAVDAAA AGRNFATKLFNATKFALMNGAGVAKLPARDALTDADRWILDRSEEVRAKVDVYLDDYQFA KANELLYHFVWDELCDWYLEIAKTQIPRDFDGASAEEQATGRTTQIVLGRVLDLVLRLLH PTMPFVTEVLWKALTGGETIVTAPWPTQDDTNGGAEKDEVAARRIQDADKLITELRRFRS DQGVKPSQKVPGRLDFAAADLQEQEGLIRNLANTTEPGEDFTASASIEVRLSQATVEVTL DTSGAVDVEAERKRLEKDLAKAQKELDQTGKKLGNEAFLSKAPEAVVEKIRVRQQVAQEE AERITARLEGLK >gi|227860827|gb|ACLH01000093.1| GENE 37 35497 - 36318 945 273 aa, chain + ## HITS:1 COG:Cgl0115 KEGG:ns NR:ns ## COG: Cgl0115 COG0413 # Protein_GI_number: 19551365 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Corynebacterium glutamicum # 10 271 8 269 269 306 64.0 2e-83 MSHNPGHRARLRTRHFARAKENSQAFACLTSYDCMTAGIFDEAGVDLLLVGDSLANVVLG RETTLSLTLDEMIPLARAVVSSTSRAFVVVDLPFGSYEDGPSQALETAVRVMKETGAQAV KLEGGAERAPIVAALVAAGIPVCAHIGFTPQQVHALGGFVVQGRGAGAEKLHDDARALAA AGAFAVVLEMVPAALAEQVTKELPIPTIGIGAGAQTDGQILVWTDAFGLGGPKAPRFVRR YADLRGALLEGAKEYVSDVNERAFPNAEESFED >gi|227860827|gb|ACLH01000093.1| GENE 38 36329 - 37150 889 273 aa, chain + ## HITS:1 COG:Cgl0114 KEGG:ns NR:ns ## COG: Cgl0114 COG0414 # Protein_GI_number: 19551364 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Corynebacterium glutamicum # 1 271 1 279 279 318 65.0 7e-87 MQILTTKSELRAFHAAASGSVGLVPTMGALHDGHASLVRRAREENDTVVCSVFVNPLQFT DLGDCEDYRAYPRDLDADAALLESLGVDAVFAPSVEEMYPGGTPRVWVRTGEMGSVLEGA SRPGHFDGVATVVSKLFTLVRPDRAYFGQKDAQQVAIIRRLVADLDLPLDIISAPIVRAA DGVAESSRNSRLSPVEREQAVALSQALFALRDGASLDEASAQLASSPGVTVDYLTVVDPA TLEPVDAQHRPALALVAAQVGPVRLIDNLVLES >gi|227860827|gb|ACLH01000093.1| GENE 39 37147 - 38109 1285 320 aa, chain - ## HITS:1 COG:Cgl2329 KEGG:ns NR:ns ## COG: Cgl2329 COG0039 # Protein_GI_number: 19553579 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Corynebacterium glutamicum # 8 318 11 328 328 386 65.0 1e-107 MTASKPVKITVTGAAGNIAYSLLWRIAAGDVYGKDTPVELALLEIPDAVGAAEGVAMELN DSAFPLLRGITVTDDPQVAFKDTKAAFLVGSRPRSKGMERADLLEANGAIFTVQGKALND VAARDVRVLVVGNPANTNAYIAANSAPDLDPSQFTALMRLDHNRTLSQVSLKTGVPTAEL NKVAVWGNHSASQFPDLTFSNAEVDEDWYKEEMIPKVAKRGAEIIAVRGKSSAASAASAA VDHMHDWIHGTEDWRTAAVVSDGSYGVDEGLVAGFPTVARDGKWEIVQGLELNDFQKERI EASVQELREEREAVAHLLKD >gi|227860827|gb|ACLH01000093.1| GENE 40 38057 - 38242 118 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPAAPVTVILTGFDAVMCESFRLGIHLPTLVPFSAPMGCDFTPERCEFFVLELHGRLFS A >gi|227860827|gb|ACLH01000093.1| GENE 41 38285 - 39028 787 247 aa, chain + ## HITS:1 COG:Cgl2330 KEGG:ns NR:ns ## COG: Cgl2330 COG1309 # Protein_GI_number: 19553580 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 4 216 20 234 259 184 49.0 1e-46 MSAETSSVDSGSVEHVIDVAISEFSEHGYAETKLENVSKLSGMSKRMIHYYFGDKKGLYQ QALAAAARRLNPPEGSLKINSAVPVEGVRTMVDWLFRQHVNNPEAIRMLTMESSHSVLET SQALVDVSEISLHLDRLLMLGQDSGAFRPGISANDIFTLISALTMYRVTNHAMMSNLLDI NMYTHNNTEGLHRMAVDAVLAFLTANIPDIGFESYLTQNETELDAESAPLDVYSTEDEGD ASASLYQ >gi|227860827|gb|ACLH01000093.1| GENE 42 39364 - 40995 974 543 aa, chain - ## HITS:1 COG:PM1074 KEGG:ns NR:ns ## COG: PM1074 COG1109 # Protein_GI_number: 15602939 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Pasteurella multocida # 3 514 2 517 551 377 42.0 1e-104 MTSLLETARWWAEHDPDPATRAEIQSLIDARDEQTLRPLFAGPLSFGTAGLRGTIGPGES QMNRAVVIRTTAGLMDVLKKHVDVPKVVVGCDARHGSAAFHRDVADVVAAAGGHALVLPP QNPTPLTAFTVRQLGADAGVMVTASHNPPQDNGYKVYLGGRVVEGDGQGVQIVPPFDSAI AAAIAAAPPADQVARDAANGPGKVEEVDTRESYLTRIKERAGEGPRDLRIALTPMHGVGG ELALKALEAVGFTEVELVAEQAQPDPDFPTVTFPNPEEPGALDCAFAAAQETRSDIIVAL DPDADRCAVAIPTDNGWRQLTGDETGALLGNYLARDGGVLANSVVSSRFLGRIAQARGAQ WRTTLTGFKWIARTPNLTFGYEEAIGYCCDPETVADKDGISAAVTVACLAAELKSAGKNL QDRLDELAAELGTYKTKPLTFRFDDITQIAPTLEQILQSPPESLAGSPVLRASDMSKGYQ GLDPTPGLVLETEANDRVIIRPSGTEPKLKCYLEVVREGDVDWVGAEERLDRIAAELKQE LNL >gi|227860827|gb|ACLH01000093.1| GENE 43 40997 - 41653 656 218 aa, chain - ## HITS:1 COG:BH1352 KEGG:ns NR:ns ## COG: BH1352 COG0274 # Protein_GI_number: 15613915 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Bacillus halodurans # 7 215 5 217 224 169 51.0 3e-42 MTSRTDVAQMIDHTLLKPEATPDQVAALAKEAGELGTYSICVSPNQLPVDVPSGVHVATV VGFPSGAVKTEVKAAETGRAVKDGAEEIDMVVNLSQVKSHDYAAVEADIKAVRDAAPAPV IVKVIIESAALDDEEIVATCQAAERAGADFVKTSTGFHPAGGASVHAVKLMAETVEGRLG VKASGGIRDAEAAQAMIDAGATRLGLSSSAAVLEGFEA >gi|227860827|gb|ACLH01000093.1| GENE 44 41681 - 43123 1206 480 aa, chain - ## HITS:1 COG:MT3415 KEGG:ns NR:ns ## COG: MT3415 COG0213 # Protein_GI_number: 15842906 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Mycobacterium tuberculosis CDC1551 # 57 479 6 426 427 461 60.0 1e-129 MGTNRKLLIDICSTSDNNGLCCDAQARILSEVKHSGLHSVSRNRQAKSEGVVMAEKFDAV DVIRTKRDKGVLSPDEIDWVIDAYTRGVVGDEQMAALNMAIFLNGMNRGEISRWTQAMIA SGETMSFDSLSKKTADKHSTGGVGDKITLPLAPLVAAFGVAVPQLSGRGLGHTGGTLDKL EAIPGWQADVSNERMMEILEDPGCIICAAGAGLAPADKKIYALRDITSTVEAIPLIASSI MSKKIAEGTSSLVLDVKVGSGAFMKNQEQARELAQTMVDLGKDAGTKTTALLTDMSTPLG RKVGNALEVEESVEVLAGGGPADVVELTVALAREMLEAAGVHDADIEAALKDGRAMDKWK QMIKAQGGDPDAALPVASHTHDVIADSDGYLTELDALAVGVSSWRLGAGRARKEDPVQAT AGIELHATKGEKVTKGQKLFTLHTETPDRFERSLEVLNSGFQITDEPLSEERKIILDRIS >gi|227860827|gb|ACLH01000093.1| GENE 45 43173 - 43607 267 144 aa, chain + ## HITS:1 COG:SMc04124 KEGG:ns NR:ns ## COG: SMc04124 COG0295 # Protein_GI_number: 15963881 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Sinorhizobium meliloti # 11 144 26 151 152 98 43.0 4e-21 MNATTIPTDVELLEKAREAAHHAWAPYSSFPVGAAILLDDGRVITGSNVENASSPLGICA ERNAAAHMITSGEATADDGHLPNLPVIRAVAIVGLKAEPCYPCGACRQVLREFNCERVIV SVDGAPRSFDFSEILPYSFGPEAL >gi|227860827|gb|ACLH01000093.1| GENE 46 43626 - 44846 1254 406 aa, chain + ## HITS:1 COG:BS_yutK KEGG:ns NR:ns ## COG: BS_yutK COG1972 # Protein_GI_number: 16080271 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Bacillus subtilis # 1 401 1 404 404 340 49.0 3e-93 MERLQGLLGILAILAVIYVLSSSRKNIKWRTIGVGLALQIVFCYLVLAWEPGFKALAAVS HGLTKLTDFTNEGTSFVFGGLLGENFIFALNVLPVVIFLGAIIAALYYLRVIQYFVEYVG SGIKWLMGTSKVESVWATTVIFLGQSEAPLVIKPYLPKLTRSELYTCMVGGFASVAGSTL IGYSLLGAPLEYLLAASLMNAPGSLLIAKGLMPETEESSLDATVKDVRDNDSKNIIDAIS NGAMAGGKIAISVACLLIAFIAMIAMLSAILGGVGSIFGQDNWSLEGLFGLLFAPVAWLI GVPWDDVMQVGNFIGQKTILNEFVGYTAFGESIDQLSDKAIMLSSFALAGFANISSIGIQ IGAIGGLVPERRGEIAKLGPKALFGGFLTNMLNAAIVGVIVAPMVL >gi|227860827|gb|ACLH01000093.1| GENE 47 44898 - 45833 341 311 aa, chain - ## HITS:1 COG:BS_deoR KEGG:ns NR:ns ## COG: BS_deoR COG2390 # Protein_GI_number: 16080994 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Bacillus subtilis # 4 309 5 310 313 288 47.0 1e-77 MELRDEQSLQVAKLYYRGGLSQSEVAAEMGLSRPTVAKLLQHAKTRGYVTVEIHDPREDG DELGQRLMERYGLEDVRLVFSPRGDEDTLTEGLGRVGAKMLHELVHDGMSVGISWGNTMH SVARHMQPKSVAGVEIVQLKGGHSHSIRVTNDMDTLKRISAAFGAETLSLPLPVIFDSAE AKEIVEKDRHISSILNAGRHADLAVFTVGAVSRDSLLMNLGYLSEEEIHVLERQAVGDAC SRFYTADGEVASPAIDARTIGISLSELKAIPQRFMVAGGLQKMAAIDTALRMKLATHVVI DKETANRLLQL >gi|227860827|gb|ACLH01000093.1| GENE 48 45924 - 47219 260 431 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 169 396 258 432 466 104 32 2e-21 MARMQESADLLKCSFCGKSQKQVKKLIAGGGVYICDECIELCNEIIEEELGAAQAEADEE KEMRLPRPSEISAFLDKYVIGQDQAKRVLSVAVYNHYKRIKAEEAAGLEGRRKKAQDEEV EISKSNILMLGPTGSGKTYLAQTLARLLDVPFAIADATSLTEAGYVGEDVENILLKLLQA ADFDVERAQHGIIYVDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTVAAIPPQGGR KHPNQEFIQLDTTNILFIVAGAFAGLDKVISERVGKKGVGFGAKLETKDEKESVDFFSQV RPEDLVKFGLIPEFIGRLPVVATVDNLDRESLVKVLVEPKNSLVKQYQRLFSMDGAELHF EDEALEAIAELALERKTGARGLRAIMEELLVPIMYDLPDREDIASVHITQDCVTDGGEPE FVYSDEAKESA >gi|227860827|gb|ACLH01000093.1| GENE 49 47419 - 48723 1699 434 aa, chain + ## HITS:1 COG:Cgl2334 KEGG:ns NR:ns ## COG: Cgl2334 COG0477 # Protein_GI_number: 19553584 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 1 433 1 444 446 322 46.0 1e-87 MDIRELIDRSPMGARQWLIIAIALFLNALDGYDMVAMAFGAGTVSEEFALSDSSLGWLLS SALIGIGLGSLFLAPLADRLGRTTLITVSLVIDLVGLVLTALAPTFSLLLLCRLITGIGV GGVLVCVTVLVSEYSNLRFRGLAVAIYASGYGLGASFCGVVASSFDTWQPIFWVGAALTV VALILTVAFVPESADFLAARGRMDTVRTITAKLGLTGDVSVRPRTSHKASYKDLVSPQFL RTSIKLWLAFSFIMFAYNFTSQWTPKLLTAEGLTAQQGIIGGIMLSFGGAIGAILFGLFT TRIDARPLLIVFCLISSVVLVGFINSTAVPSLMFALGVGVGLTLNACISGLYTVTPEAYP SALRTTGTGAAIGIARVGATLAPILAGYLLESGWTPTGLYTLAGATAVLAGVSLIGVRAY TAATKQTAPQTVAA >gi|227860827|gb|ACLH01000093.1| GENE 50 48765 - 49535 990 256 aa, chain + ## HITS:1 COG:mll6717 KEGG:ns NR:ns ## COG: mll6717 COG1028 # Protein_GI_number: 13475603 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 29 250 30 253 254 234 54.0 1e-61 MFNLQDHVAIVTGGAAGIGRGIVSALREAGATVVIADLNLEAAQKTAEELGADALLVDVT SRDSVRTLYRDVVKRYGRIDIVCSNAGVFPNCPLEDMTDEQWDAMFAINTHGTFTVVQEA LPYMKKAGYGRIVITTSITGSHTGYPGWAHYGASKAAQQGFMRSAALEVARDGITINGVL PGNILTEGLEGQGQEYLDQMARSVPMHRLGSPRDIGNAAAFLASREAGYITGQTIIIDGG QILPESPEAILPPYEA >gi|227860827|gb|ACLH01000093.1| GENE 51 49589 - 50212 966 207 aa, chain - ## HITS:1 COG:Cgl2359 KEGG:ns NR:ns ## COG: Cgl2359 COG0740 # Protein_GI_number: 19553609 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 1 205 1 206 208 322 87.0 4e-88 MSNLQMPSSRYVLPEFIEQNAQGSKTTNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVL ESQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGK RAALPNSRVLIHQPRTQGTQGQVSDLEIEANEIERMRRLMEETLAEHTGRTAEQVRIDTD RDKILTAQEAVDYGLIDTVFDYRKLNA >gi|227860827|gb|ACLH01000093.1| GENE 52 50234 - 50833 889 199 aa, chain - ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 9 199 7 197 197 331 85.0 6e-91 MSEKISMNSSSTGMNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDI SLYINSPGGSVTAGMAIYDTMKYSPCDVATYGMGLAASMGQFLLSGGTKGKRYALPHARI MMHQPSAGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAQQA KEYGIVDHVIESVNGPITN >gi|227860827|gb|ACLH01000093.1| GENE 53 50972 - 51652 358 226 aa, chain + ## HITS:1 COG:MT2858 KEGG:ns NR:ns ## COG: MT2858 COG1321 # Protein_GI_number: 15842326 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 221 9 226 228 197 46.0 1e-50 MSVSELSTSTQNYLKAIWGLKEWSSEPVTATLIAKQLGLKLSSVSDAVRKMSKQGLVSHT PYGSVELTELGRQYALVMVRRHRLLESFLVQALDYTWDEVHNEAENLEHAVSDMLIERVD KFLNYPTRDPHGDPIPTVDGQITIPSAHRLTDSGAQPQVTVERISDSDPQLLKFLEERGI VTGAVLSTREGAPFSDSLEIQVAGSTQWVVLGRPATDAVFVAHHSR >gi|227860827|gb|ACLH01000093.1| GENE 54 51737 - 51946 97 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227504049|ref|ZP_03934098.1| ## NR: gi|227504049|ref|ZP_03934098.1| hypothetical protein HMPREF0308_0319 [Corynebacterium striatum ATCC 6940] hypothetical protein HMPREF0308_0319 [Corynebacterium striatum ATCC 6940] # 15 57 1 43 43 72 90.0 1e-11 MSTYGCETWIIPVFLGRSGMRTAGLSKRSTNLFVFSETLEKYTKSGESDIAILLILALAI SGIGDIRKD >gi|227860827|gb|ACLH01000093.1| GENE 55 51882 - 52235 317 117 aa, chain + ## HITS:1 COG:BMEII0931 KEGG:ns NR:ns ## COG: BMEII0931 COG1780 # Protein_GI_number: 17989276 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Brucella melitensis # 2 111 27 134 135 145 60.0 1e-35 MRIPLRPKKTGMIQVSHPYVLIVPTYGGGSLKRAVPKQVIDFLNDPINRSFIRGVITSGN TNFGSAYCVAGRIISAKCHVPELYHFELLGTQKDIAAVKQGLQKFWEQQKQLTMTPH >gi|227860827|gb|ACLH01000093.1| GENE 56 52286 - 54481 1597 731 aa, chain + ## HITS:1 COG:MT3137 KEGG:ns NR:ns ## COG: MT3137 COG0209 # Protein_GI_number: 15842617 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 19 731 14 725 725 1022 69.0 0 MWPLDATPTQPHGTTLRTASADNAGGVGKRKSYHALNAQLNLFDASGKIQFDKDIQAAQD YVTHHVAPRMHQFDSTKQRLEWLVDNEYYERDFLELYDDAFLCAMYDRAHRAKHQFRTFL GAFKFFTSYALKTFDGSRFLEGYEERVATTALYLAQGDEELAEKLVDDIMTGRFQPATPT FLNAGKAQRGEMVSCFLLRIEDNLESIGRSVNSALQLSKRGGGVALLLSNLRESGAPIKK IENQASGVVPVMKILEDSFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKVRI KTLSLGVVIPDITFRLAKENKDMHLFSPYDITREYGVAMSDMSITEYYDELVANPRISHT TIKAREFFTTLAELQFESGYPYILFEDTVNRANPLKGHINMSNLCSEILQVNTPSTYGAS GDYTTVGQDISCNLGSLNIAKAFESPDFGETVETAVRALTKVSDLTNIEAVPSIAHGNAS MHAIGLGQMNLHGFLASQRIPYGCAEALDFTNIYFLTVTYHALRASHALAVEKGQRFTGF EESTYATGAYFDKYIDQDWAPATEHVKQLFHEAGVQIPQREDWLRLKNQVMQDGIYNAYL QAVPPTGSISYINDSTASIHPIASKIEIRKEGRLGRVYYPAPEMTNDNLEYFDDSYAVGY EKIIDTYAMATQHVDQGLSLTLFFTADTTTRDINKAQIYAWKAGIKTLYYIRLRQSALQG TEVEGCVSCAL >gi|227860827|gb|ACLH01000093.1| GENE 57 54533 - 55558 742 341 aa, chain + ## HITS:1 COG:ML1731 KEGG:ns NR:ns ## COG: ML1731 COG0208 # Protein_GI_number: 15827930 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Mycobacterium leprae # 27 341 11 325 325 422 66.0 1e-118 MSSTSNSAELTSISVTPPSYRHDPSARIRAINWNRVSDDKDLEVWNRLTANFWLPEKVPL SNDLPAWQRMTPEERNLTMRVFTGLTTLDTVQATVGEICQIQDARTEHEEAVYTNIAFMQ SVHARSYSSVFSTLSSTKEIDEAYRWAVNNDLLQARAKKVLAHYFGPDPLKRKVSSTLLS SLLLYAGFYLPLHFSVHATLTNTADMIRLILRDKAVHGYYSGYKYQRGLESTTPLRQKEM HDFTISLLEELYALELDYSGELYEPLGLMDDVAVFVRYNANKALMNLGYPDYFPPEETEV NPEILAALAPGADENHDFFSGSGSSYVIGTAEETSDDDWDF >gi|227860827|gb|ACLH01000093.1| GENE 58 55539 - 55814 107 91 aa, chain + ## HITS:1 COG:no KEGG:cauri_1895 NR:ns ## KEGG: cauri_1895 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 91 2 92 92 141 100.0 7e-33 MMTGISKPFPRPDQGSWLETIALFEAIREGNQPAAMRLLNTSAAREAVLGGLLGLIELYF RHEEGDKVDGFLTAAHAAGPPPAFGCKPFLP >gi|227860827|gb|ACLH01000093.1| GENE 59 55854 - 56435 689 193 aa, chain + ## HITS:1 COG:NMB1796 KEGG:ns NR:ns ## COG: NMB1796 COG0431 # Protein_GI_number: 15677635 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis MC58 # 5 186 6 187 190 270 70.0 2e-72 MATPRISVIVGSLRRGSFTRKIAHEVLTMIPENYEASIVEIRDLPLYDFDYDDPAVTDKP TPAEYTTFRESIKNSSGILFITPENNRTIPACLKNAVDIGSKPNSDVAWKNLPAGIISHS VGRMGGYSSQKNLRLALSYFDMPLPGQPEVFLGQSPTLFEESGHLNERTADFVKDYVMRF LQLTDKAFRATNG >gi|227860827|gb|ACLH01000093.1| GENE 60 56609 - 57964 2104 451 aa, chain - ## HITS:1 COG:Cgl2361 KEGG:ns NR:ns ## COG: Cgl2361 COG0544 # Protein_GI_number: 19553611 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Corynebacterium glutamicum # 1 438 1 438 449 495 65.0 1e-140 MKTTVDKLSDTRVKLTVNVPFAELDKEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGR GPILEQVVNDMLPSRYEQAVTENDLKVIGQPEIDIAKLEDNDFVEFTAEVDIRPEFEVPD FSKISVKVPALETSEEDVDKALEDLASRFGELKDTKRKMKTGDYAIIDITTEVDGTKLDE ASHEGMTYRIGDDNLIKGLDTALRGMKTDEDNEFTTTIQSGEHEGDEATVKVHVQQSKER KLPDLDDEFAQMASEFDTIDELREDTKTRVEESKKSEQAAAIRDEVLKAALEEVSFELPS SIVDEQVHAQLHQVMGQLAHDEKALAQLLEAQGTTREEFDADARKSAEESVRTQLFLDAL AEIEEPEVSQQELTDHILFTAQSYGMDPNQFIQQLQSSNQLGNLFSDVRRGKALATAICR AEVTDEAGNKVDVDQYFGEIDEDEAEASEEK >gi|227860827|gb|ACLH01000093.1| GENE 61 58249 - 59067 795 272 aa, chain - ## HITS:1 COG:no KEGG:cauri_1898 NR:ns ## KEGG: cauri_1898 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 15 214 15 214 272 346 100.0 5e-94 MSSLLLLILVVGGGAWFLSSRNGKKQQELRESQRFDDAMADARRWTERLGGQVMNLSGTD TASQQAMADASERFTAANSAISQATTAKQAHLARESALEGLYYVAAAREIMGMDPGPELP PLEGQRQAGKVTETRTVEANGETLTASPSASAETPNYYPGGVVAGRPVPAGWYSRPWWAD ALTTGVWMVGYSMMFNAMFAGMSGVGYSAAAAESGDWGGDMGGADGMDGGAMDGAGDVGA GDAGGGEEGGFFDGLFGGDGGDGGMFDFDFDF >gi|227860827|gb|ACLH01000093.1| GENE 62 59427 - 59873 533 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_1967 NR:ns ## KEGG: cauri_1967 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 262 100.0 4e-69 MQIISPDTLNRIGTKITLIGMATKTVRAERTTGNRVALESARKGLAASEDDYEKATGELA PGQRAWVETLFAKPLEMARAGKDGYNEAVYMAQIKWADDQIRELETITAELKDARSEWVQ DAMSYDVSAYQVAKMCGRTPSTVQRWVR >gi|227860827|gb|ACLH01000093.1| GENE 63 59889 - 60356 619 155 aa, chain - ## HITS:1 COG:no KEGG:cauri_1968 NR:ns ## KEGG: cauri_1968 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 155 1 155 155 241 100.0 1e-62 MARQMRTHETHYTTEDYQVVTQTGFVNGKRVYETAVVSRNTGREEFRNVESVEKAITLCD KRQAELEKLRAELAAKREAEAQAEVKTTNEEVAEKEETRGPLATDRQVDYIMSLLAQHGG QNTTWFSAGPTTLKEVANMTRRDASTYISALKGDN >gi|227860827|gb|ACLH01000093.1| GENE 64 60739 - 61161 357 140 aa, chain - ## HITS:1 COG:no KEGG:cauri_1969 NR:ns ## KEGG: cauri_1969 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 1 140 140 279 100.0 3e-74 MQIDEILTFLSGSKNPLGFFLSIAIILAFVSGLFSKAAENYGGIIGAASKALTRHKQAAI AADEASDARRLDRMEETIQRLDEEVGELRAKDKSHHEYQLYVAGYWRKLQFWAVERDITL PPPPMMTYPEWKLSTYPGAD >gi|227860827|gb|ACLH01000093.1| GENE 65 61151 - 61561 332 136 aa, chain - ## HITS:1 COG:no KEGG:cauri_1970 NR:ns ## KEGG: cauri_1970 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 136 1 136 136 238 100.0 6e-62 MTRTLRLIIAALAFQEASRGLDYLFGDSRPGTGVFEIDSIGPAFAWGLACVVAALVITAG LVTKRDNVVRSGAMLSAAIYIAFALMVVDNVYADDTIDDWRYLTLYLSAAFIWGVIAWAL TVRMAVAKNRKEHSAD >gi|227860827|gb|ACLH01000093.1| GENE 66 61564 - 61929 432 121 aa, chain - ## HITS:1 COG:no KEGG:cauri_1971 NR:ns ## KEGG: cauri_1971 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 121 1 121 121 186 100.0 3e-46 MGKHYKNPIFTTVGEQVAEAVAAELVAQPWWLRYKGTIMLVLQALAWVAGVAPVYLADAP EWTALLVGGIGFFVTTLVNRLTVDGVTPSMAPRLAEQAEATQAEQAPPTLPVYTGPTTAA E >gi|227860827|gb|ACLH01000093.1| GENE 67 61930 - 62748 587 272 aa, chain - ## HITS:1 COG:no KEGG:cauri_1972 NR:ns ## KEGG: cauri_1972 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 272 1 272 272 552 100.0 1e-156 MDWMNVEPDKYNLLRKHYTPGRGGAKIEFVTLHHMAMIGDIDDCVRVWQDRAASAHYAIS PTGMIGQAVNDSDTAWSNANLYSNQRSISIEHSNSGGPDQDWPISEATREAGAHLVAALC RYYKLGRPVSGKNVRFHSAESGGSTACPYHLRPGHKYHDAYIRRAQHWYDQMTGKTTPKQ PAKNTGGSSVTMNAVEQVNAHTRAFISGFFTPQFDAIQEIWRQLRGPSGKGWPQLGQDSQ GRNLTPVDALAAIRCQLAQIQADLDELKRRKK >gi|227860827|gb|ACLH01000093.1| GENE 68 62802 - 63668 751 288 aa, chain - ## HITS:1 COG:no KEGG:cauri_1973 NR:ns ## KEGG: cauri_1973 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: Glycerophospholipid metabolism [PATH:car00564] # 5 288 1 284 284 572 100.0 1e-162 MLKVMMRTPGGDREMQLWRRTQGGDIPMVLGQVGDDSQGDTPNPNPVAEPGVKGFLKTRP FYMAHRFGGTEYPEMTKVGLQASIDAGFRCYEFSTYRTKDGVYIGSHDWTTKRTTGVKHE IWNTDWATIKTLKQETGPFMRLEEVVEMMPEGTVLALDHKTTSAGINTNPDDLASEEALF KKLEELFDDPTERVIWKLFSGSDSAERAKARGYTVMCMVYENELDAADLSRWDILGLEWN ATQAGWDRLKAAGKPTIAHIITSASQARVALDKGADGLMSSVPSTVHP >gi|227860827|gb|ACLH01000093.1| GENE 69 63661 - 64731 870 356 aa, chain - ## HITS:1 COG:no KEGG:cauri_1974 NR:ns ## KEGG: cauri_1974 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 356 26 381 381 502 100.0 1e-140 MIELDGVNMLHLPIPTGYDGDIEGLFNSAADKLSVAKRAEEAAIRSASAARADADRVAKV AESTSWEGDRLTVGGKTSPSLRGPKGNPGPKGDTGPKGDSGPAGPAGITVVASSAEAARL PIGTLYAIRAAGVPGGVPPNPSPNPGGGIPSAPEPLPTDITIVGVASGNSSGVSSIVPKI SGAKPGDKIIIAINSQGKSGMSMTPPAGFTQPVNGYWVGTQQSWIIEGDYTTDLTVKSAL PADVGWAAIAVRGASTVTAGAVADRTQGGTPTTVTAPAAPAVAGDLILGFAFERTTAQET AGQISISPGWEKIHVTEQDANPQTVVVAKGGPGDMLVTYPNPQASNGSGVQVVCRA >gi|227860827|gb|ACLH01000093.1| GENE 70 64892 - 68353 1880 1153 aa, chain - ## HITS:1 COG:no KEGG:cauri_1975 NR:ns ## KEGG: cauri_1975 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 1153 1 1153 1153 2128 100.0 0 MVVKHTPRHEVIDARVWDVSMSQWWSLAPWEEINLQWREDWGVDTGEIRLAEDHPRASRL RAARHVPVPVTFEVNGVRWDGYVESTETGQEADGTRYLRVTVQSETKHFHRMLGRGPVAS AADGSSDVEEGPLGEVTHKLIARGAVRTGLPTYVLIDHAGDPVQVEVRTEDYVAGLLEEP LAGSDSFVQVRKLLPGEAIPGVGTALHYEGPMERDWAKAQLGKGVWPMASINPRVYGAAV PLDVPPMPDNSWAGRGQVGDGALLAEPMDGICWVPFETVVERPVGYYAEVDPAGVHVISR DRISVAPGAQAGRPHFVTHWAAGTFKETPALKASISDGLVRTTQGEAIGSVAEALGKIGK GEAYAWKDGAGWVLATPEEFRADNKRYAPTEYGQPQTPGVLVWQHAGRDRRGVVFSSAPG GGLKRWATTETAPDGAMLIGGGQLDAQTIAALESGVLKPQGTVTSAEGDKAKALLPSSAT MPGAVERLDVDVQPHATIDGTDVSFSRAGGRVNIEAAGPFFLREKYMSLSSTGGTNPTAD IAREWAASQGTTSMSLTPGHHQSVVFGDDMRRPDGRVVPGWKPGDRISFVDGNTRVSEVI MGYTLKASSTEELTVEPILGRRDNGIMSRFKSLVSDSERSSRKALLAPARKVPKQAVQDI VDKSTGELTRSFEASYRAYSASLMELGDTWRQELKNGLSAEQQARVEALRNEQQARERAG TDLRGQLEAKLNSASAQLSGQIASERQSRQSGISAEAEARKNALSSEEAARKAAIAAEAQ ARALGDSNEARARQKAISDLSTSFTTELETYGRLVKEAKEYVDPATAAVVAFWSEENQNN FNKAVQLTLAAQSAYNDVNNIKWVSQDAWNEQQQKINDAAAKFQAQQLEINDQNEAFRKL TEELDAQQTEQIVQLIAVQKQIADESRGRIREIMATPAGTSDPRIPVEKRNDGEPGWQIT LTDMVGGSVFNVQWHASTGTAPSGATEIKQTYSIVRTLDSNLSSYNLTSTPNHAFVFARW ASVSKRQVTVDKSADSSAIPRRTWQSIMTYPAPTKVARQATLRLKVTWAASTYDDMYGIR IRAGDRTLRQYMMTKLGPLTFLGNGEKWMSTTVSNQVLQPGETISAEVYTSALTDGARRM KSAELTGTWIEEV >gi|227860827|gb|ACLH01000093.1| GENE 71 68347 - 69165 498 272 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184738|ref|ZP_06044159.1| ## NR: gi|262184738|ref|ZP_06044159.1| hypothetical protein CaurA7_12144 [Corynebacterium aurimucosum ATCC 700975] # 1 272 1 272 272 524 100.0 1e-147 MSIAWDKKFRITLWGVDGEPLALSRPRRKREGVFLDDVPDGLSGMAKKHLWDGASGVWRG TSVTQNTLRLGLVVRGRNVRGDVNRLLSSLGDGSEAVGLSITSAEWGHRWYRARTQDVSK IEWFQSPGGAKVAKLSVILEFSGDTTRRFRERLELGPGDLYGLIPILIDGDTDIWPSFRI SGRYKSARLRLTAKDTWQELPYRAAGWAIDSHPERRYVTNLSGEPDFSAVVPFWPNPVHP VDGIGQVEVDVVSPGSDFKCVIEWIPEFSRAW >gi|227860827|gb|ACLH01000093.1| GENE 72 69177 - 76004 7455 2275 aa, chain - ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 174 440 228 496 696 117 32.0 2e-25 MAALDLGDLGFKITVETGEFDRAMGRVEQAARKVDKQLDNTGKKKLSVKADGGQLDKLQS SARDAAGALDQVGSKRVAPSVETGGLGQVKTAAAEAAGSMGELNSHAGETGSVFSGAAGG IAKFVGAAVSLGSIATAAKAVASAGMDFQSQMNTLSAVSGATGAQLAAVGTKARELGTDA SLTATSASDAAAAMTELAKGGFTVEQSMTAAKGTLQLAAAAQVEAADAATIQSQALQAFN LGADEAARVSDILAGAANASSAEMTGIAQGLQQAGTVANQFGLTIDDTATSLAMLANAGI QGSDAGTLLKSAMLALTDQGKPAQAAIEELGLTVYDANGKFVGMSDLLGQLKSASESMTE EQYQAATAVLFGSDAMRLAGVAAVQGSEGFDTLKEAVTRQGQAAEVAAAQTQGLPGVWER VQNTMEDLSLGVFDQVDDQLVRMGNGAVDALDAAAPKIEAFASSMAGLAGTSMDGLGKTV ELWGKLPGPVKDTAVALGAVNMAMKLLRTERGANAVTKLAESFANTKSSLKIFGSSMSEA YGYMRQANPEMSRAGAAMRVLGGQGGVAAAGMSKLKAAGMGVMDMFGGPWGIALAAATAV ITDVIAFNRRASQAQEDYKDATRSAAEAQERLNSALAGTHAPFTKEQFEDAKLVAEGYTA SIRMNGETMAGWRGEAIKAVDVAGLLGSSQSKAWQETIKQAEIMGEASLLTGDALKAQGK DWEDLGEIVARGGQEYKDVIAQLNSVEGHWWNDQGEAAQKAVADLESARHEYEMAIDAAR SADPAFQAIGESIGVLADEAASAEDKLSALKRIMDEMSGGALSKDQAQAALVGDIEQQAE QVEALAKAVAEVGPIELDPDGTIDATTSSGAKAVSMITELGDSMAEAAVAGVDVDEIFAL QADNMEGLRNALGLTEEQFQNLMQSYGITREVLALPLEMKGADTVEQQIAKLETGLAGLK EGNSVEIAPPDPAVVLALEDMGYKIEHLPNGNIEITSTADVNIEELDDLHSKVDEIDGLH AKATAELDTTEFGLNAEQARAIGEELDGLDVSPEADLIIEKLLQGKDVSVGELNMLSQEK AVPTADLEKSLLDAGVSDALVKTANLGEQRPTPKSDMDNSSFMAKARAMMDMIGMLTRPM TTTVTFVGRKVGQWLSREHGGQIPALAIGGNTGYRLPGTGPGTNIVDGFMGVTDDGFPIA RVNRNEWVINDKSSEKFNGTLAAINANDPRGIMANLAHELPALETGGRTKSEEVKSILAP YNNGPYVMGGFSPSSFDCSGAVSAGVNTYLGLDPFDSRMSTVNEGAWLAAKGFKSGRGNG NELVVGWYDYGGGANGHTAMMLPDGTFIESGGNTGQGMTIGGAAGPLDGRGFTNFMYLPG SDKDSGNGMTGDLGETDGYGTDIGDIADVAGGGARARASWKNVSAPEAGKTFHAPGLASN RVTATVGGSLGAANRAQARQYADQYGVPQSMVDQAFGFANPFVGQNSYRQTLGEPATKQI LGIAKQLEGALGKGGIAAQVEAALNAKTPNWDVWLRVNEDTLAAFNELGEAQTNRKNASM EITEAEEKLAELRKNASKSDKDATEKLAEAYKNLEKAKSKELTKSYTAAKRADDIEKAEK KIRDLKEKADENDVKSAQRIAEAEQDLVEARQAEKEAIAEVNDAQIRYNAALTVAPIKAA ASLADTLAEGMGRVADTMGLMAENMDRANKVADERLEAELADVQAKRGAVDAAQALRELE RQNQQARHDDVLAQQQAEYDLAMARHEHAQNAGSAEIDLAGLRQKGILDVAQRATDADRV AMLSASSVAVAEMNLDASRAASAEAEFNRKVAVEEATADLNYSQEIAKLTSERLSVATMK LAQSAAEAAGVLGNSASALAKEQEGKQKQAKGAAGILGGIAQLGAALAMTVATGGAALPA ALALGVRGLGSLTKGATSVAEGRAQEKAYKEQAKKEYDSLSKDDKRRVDTARGGLAAGVV AGALVGAAGGSGDDVAGMFDATSGLFNLPLYKKQMTAKYGAEAAELLAAKAEADINRRRK KLELDKARRDLNRVNTINPRKNELAEMAQTLKQQLAELQQENSQLAGVNNRLDTNNSLLD DKKRSVLMTLGGSGWGQDLEAGMRAAASAGGFGGVTRDEVGEWSSLNVEQGWRNLDKMRA LVEPTLAPKDTAADAAAANGLIEGLPETAVGGRYARQLADSVVEGAQQAAQRSAQAGMEA NRRRAYEDAAQAVLTQIGGAGDTTRIDTQFTGAVTVNAKLEDKVLSGLSSMVKNR >gi|227860827|gb|ACLH01000093.1| GENE 73 76400 - 76846 514 148 aa, chain - ## HITS:1 COG:no KEGG:cauri_1977 NR:ns ## KEGG: cauri_1977 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 251 100.0 5e-66 MTDFGQLQEHLDSNDVKFTLNGKEYTVDPTAQDVLKFHVHLNSSTEKTAAGQGLATFERV AHLVGSKFDTETGKITGGLLGQLMKDGATFPQLNHIVETIHIKYTSGDDLAKAYFETGSV KKALEKLNNDSQENQETGQTSGETSGDD >gi|227860827|gb|ACLH01000093.1| GENE 74 77019 - 77636 764 205 aa, chain - ## HITS:1 COG:no KEGG:cauri_1978 NR:ns ## KEGG: cauri_1978 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 205 1 205 205 365 100.0 1e-100 MAIAKYATAPNSCELNKQLNRGWALQVKPVGADPAEYKFVRGVTSLGVNIETNTVDASDI DSNGWASEEKTSRSLTISVEGQFARKGDLDLLTEDQQLLKVTGEELGSDGKVDFRTWRTD IDEGWEGTATNSFTSGSGGANDLRTFTSDLKSSCEPTRIHSVKKGEEKKESTPIDEDELL KIIRPKGAAAAESGNPGGVPGASDQ >gi|227860827|gb|ACLH01000093.1| GENE 75 77646 - 78110 401 154 aa, chain - ## HITS:1 COG:no KEGG:cauri_1979 NR:ns ## KEGG: cauri_1979 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 154 1 154 154 293 100.0 1e-78 MPEYNTQSEPRPATHEDFADHLAAYLHAQGVCADPTGNQEDGDTPAVFIGRMLDQPDRAL CIFNVSIGNDWSDSNPTARFSLAFRGASEDQLTPARDAARAMNALHDLTDIQLTAQQGVL VCRRVLNDPPVPDSNIRWHSIDTYEAVLAVPSTP >gi|227860827|gb|ACLH01000093.1| GENE 76 78111 - 78461 270 116 aa, chain - ## HITS:1 COG:no KEGG:cauri_1980 NR:ns ## KEGG: cauri_1980 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 116 1 116 116 195 100.0 4e-49 MSLRLNTEQVKQRVKQGAVQGVSEAARVVEATSVDLTPLGETGNLRQSAQAVPGTDTGGK VEGVVRYDGLPYIRRQHEETTWNHPRAGQAKYLETARAQNAERVAQIIRNHVKGMI >gi|227860827|gb|ACLH01000093.1| GENE 77 78458 - 78832 191 124 aa, chain - ## HITS:1 COG:no KEGG:cauri_1981 NR:ns ## KEGG: cauri_1981 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 8 124 1 117 117 206 100.0 2e-52 MDSGVEAMRSNTSETLARLWFRHEVKLQGEEIRTARGVTYGPERTVMASINMQSRVVQSG VGRGEEVTVAGTLNWDVEGPLPAIGSTVTIPSEFGAKPQRKVVTARRAYTGTGLTPDHVE VTIL >gi|227860827|gb|ACLH01000093.1| GENE 78 78817 - 79266 293 149 aa, chain - ## HITS:1 COG:no KEGG:cauri_1982 NR:ns ## KEGG: cauri_1982 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 149 1 149 149 241 100.0 5e-63 MNIEMNYIDRTELIADAIPGTYDGLDDAQLDSLITRASMLMRRYTKSAVYAVDEYGMPTS DRIRSAFRDATSAQVLAWVEAGVVGELSTGGANVEASVASSSNNGSSVSFDNSVSTAART RLLAGEPSEGALLILEDAGLIGVQPWIRV >gi|227860827|gb|ACLH01000093.1| GENE 79 79432 - 80340 1156 302 aa, chain - ## HITS:1 COG:no KEGG:cauri_1983 NR:ns ## KEGG: cauri_1983 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 302 1 302 302 574 100.0 1e-162 MSVASFIPKLWAPELIVPFQKSSIYTQPGIADTKYQPMLQNSGDTVEINSIGNATIKNHD RTKDLEYDDLTTTSVKLVMDQEKYYGFRVSDVDRVQAAGDFASAATNQHGSEMADEIDKA VAKALKEGASNKLPNQTVFDGSDFYRPGKGQITAWDVVRKLATELNKVSAPTAQRWIVVG PNFGSALLADRRVTQAHAAGTDIVARNGLISSIPQLGLNVYQSNNAPVTAGREGIVAGVP GALAFATQLRELEAFRDPDRFGDIIRGLQVFGAKVVNPKGLVYVETDVAQGALGSAAPAD AA >gi|227860827|gb|ACLH01000093.1| GENE 80 80353 - 81030 955 225 aa, chain - ## HITS:1 COG:no KEGG:cauri_1984 NR:ns ## KEGG: cauri_1984 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 225 1 225 225 306 100.0 4e-82 MSDTTASVADEQNTENTTQQPGQEEGQEPTSPQHNEEGDDRISQLNAEAAKWRTKFREQE KATAEFEKRQQEIEQQFESYKQNLAKVMGLAEEEDVEDLGKKYQEQAKAADERYNQLRQR VALSEAVQKAKADPDLTVPFIKGGEAFAALDPSADDYEAQVAELVSETVAATPKLRAQVA PASSGNAPTPSENSGSRKLTVEDLDNMSPEEIYEARKAGKLNHLF >gi|227860827|gb|ACLH01000093.1| GENE 81 81112 - 83097 952 661 aa, chain - ## HITS:1 COG:no KEGG:cauri_1985 NR:ns ## KEGG: cauri_1985 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 661 1 661 661 1260 100.0 0 MADSKDRQAARLVRLYEDAEILILRELSAAIKHGTYEDVNRLLYRDAEVRKLLERARRIL TAAGAKTTSMVEELAVAEFKAAMLGVLEDVGRSAEAIPTVAALSAVQVAATGASQAIAST HLRVVREVSDVYRSITAQTVQSSIIAGADHRAAMRHALNQYADRGITAFVDRAGRKWALD SYVDMSVRTMRNQATQEGHLSGYEQAGVELVRASWHTASAPQCYPFQNQLLAISGGAGVR EMVDPATGEQVTVHVKDTLRGAISKGYHHPNAILGGEQTIDTFAGTVGASKGTYFGPAFT IRTAKGHKATVSPEHPILTSRGWRTAESIRVGDHLFNTVESDRTVPVIGGEPKLEEMPAT VEDEFASLKRYGTSTSATTSGYHFNDDRQFLKGEVDVVMADDCLLPVPDTKIVKETGEVR FVWPDMGRGEAVGHSGLHSLLHGVATPVGGALPQGDAFLLEASPNGGAANPKLGANLLAA EAGFVQVDNFGDVDVAPGLDGRETGSLEALSYRRPGDSEHPSDVCAAVPGVVESDEVVSV EKFIFRGHAYDFQTELGFYALNGIVVHNCRHRDTAYTPGDPTPQVPMDSPAENKRKYKAT QQQRYMERQLRRWKRREAVALSPLDRDTARAKTKGWNRRIREHVNNHEHLTRWSHRERPR S >gi|227860827|gb|ACLH01000093.1| GENE 82 83101 - 84675 1097 524 aa, chain - ## HITS:1 COG:no KEGG:cauri_1986 NR:ns ## KEGG: cauri_1986 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 524 1 524 524 993 100.0 0 MPMPAPNTPWPPEEYAPALEAIRRDDALISGDTDVINERRARQNGRPYTHRTQFNGGVVG AASRAFLGKPQRSTPEASHLVTHHLPIADELTTALADYMAGKPPQAKLSAEDEGNMEAAE ALDRLVSSDRFASDWWGAVYRAGSHGWVYGRVVWNQSVDPHPWIEWVDADNGMAEFENGR QIAILFWDTYQHDDDYFRLLQRHTPGQIEYQLFKGSDSSLGHPVPYDEIPEAAYLMELEG LREGTILPTGSGLITADMLDNYRPRHAWRQKKLLRYYHTSDVARAAGIFENIDHNWSQLQ HEVEAARGRLFVSEELLESDGPGQGSYLDWFRDVYKASMSASVEAKPTFEQIQFDMRVEQ YLTLIDSGIRKAVSALGLSPFTVDMDAQATGEMTATETRARTRRTRATADTKGRHERAHL SHILTAYLHMDALLNGYTPPTKPVVVSLPDQIEVSEQELTGSVTTVYTSGLMSIRAALTK LHPEWTPEEVEAEELRIKQDQAAAMPQDPLLGLGEDMAPLSDSE >gi|227860827|gb|ACLH01000093.1| GENE 83 84887 - 87142 747 751 aa, chain - ## HITS:1 COG:no KEGG:cauri_1987 NR:ns ## KEGG: cauri_1987 # Name: not_defined # Def: putative phage terminase # Organism: C.aurimucosum # Pathway: not_defined # 1 751 1 751 751 1416 100.0 0 MSNEGFRFSRGQVTAIAHSTHALNIWYGSVSSGKTLAWLFMMLGEIKQAGKSGSIVICGK SLDAIYQNVFMPLQTEPIFATAAPFIHYVRRNPTATIFGREVQVIGVNDQGAEGRIRGGT YQLLFYDELTLCPENVWEMLWSRMRATGNPNPPRVFATTNPATPAHYLKTNFIDKPGETD TYARLFTMDDNPGLTEEYKERMKASYTGIFYRRMIRGEWAAAEGAVYESWDPDTMVKGRA VGTVLAVGIDYGTNHPSAGYALTVTEDGLQVTHEWSPQTTGLGGRTRLTDGELADSLQEW LSTLPNQPKGLYIDPAAASFHEELRRRKVRTTKADNSVVDGIRQVDSLLTSGALTIAQDC KRLIEEIPGYRWDASAAERGKDAPVKELDDHCLVGSTMIATPTGPQRLDTLNVGDLVATP LGVFPIAAHEMTNPAAHTITLHLSDGRSITGTPNHPMLVNGQWVQLGDIQKGQALTSWHA PKPSPTKESDSAATQIRQCPHTANTSCPALGTNNAESITFTAKSGATTTTEKKSRKAITS TTSTMTPWTTGLRIFNSLALRSTLATMRASTSLIRSGQAATSSILPVSVNLQRNGTPAAK GTSGTPGTGLTHSASVSLSVNTRVNTAVPASRSQQLIESPDSVATLASPLGDAHPVSIMS NEPAPTAVKSSQPVSIPELRAVPVRVLEVTEEERTEPVYNLTVAGAHTYLAEGLVTHNCD AMRYAVYSSRHLWGRHVEKLRAQLTAPQTAA >gi|227860827|gb|ACLH01000093.1| GENE 84 87135 - 87557 377 140 aa, chain - ## HITS:1 COG:no KEGG:cauri_1988 NR:ns ## KEGG: cauri_1988 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 140 1 140 140 249 100.0 3e-65 MAKRGMTPKRAERAAKVVTLHDGGATFEVIAKQLGISYTQARNDYERAMEDARPDQARHV FAKLTRRLNRLHAAYWKRALDGDIKAARLILDINKQLAQLWGLEGAVKLDIEVTGGDEFA SAITSFRASIEAMGATLDDE >gi|227860827|gb|ACLH01000093.1| GENE 85 87616 - 87924 182 102 aa, chain - ## HITS:1 COG:no KEGG:cauri_1989 NR:ns ## KEGG: cauri_1989 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 102 39 140 140 196 100.0 2e-49 MMEQLQLIQAPYMRECHALGDWAHHADKAIKQLAATGQPFTADDVRALIPDGLTPAHNNA WGGLFSAWRTNGTITPIGYRQSTHGPRHGGIQRIWKGTHKNQ >gi|227860827|gb|ACLH01000093.1| GENE 86 87959 - 88171 230 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184755|ref|ZP_06044176.1| ## NR: gi|262184755|ref|ZP_06044176.1| hypothetical protein CaurA7_12229 [Corynebacterium aurimucosum ATCC 700975] # 23 70 1 48 48 87 100.0 4e-16 MSHTDTTWLCVSKQGDRFNHRKMVILSEHATLGQARGTAPIHTMSGIPDVRIVRRQTTYT AMHYAEEKEG >gi|227860827|gb|ACLH01000093.1| GENE 87 88168 - 88353 174 61 aa, chain - ## HITS:1 COG:no KEGG:cauri_1990 NR:ns ## KEGG: cauri_1990 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 61 1 61 61 105 100.0 8e-22 MNIIVTYVQTGVVTVWEEERWDALTATIGEAGELNIIDKNGDTTRTYAPGVWKTIDYRDA P >gi|227860827|gb|ACLH01000093.1| GENE 88 88353 - 88979 675 208 aa, chain - ## HITS:1 COG:no KEGG:cauri_1991 NR:ns ## KEGG: cauri_1991 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.aurimucosum # Pathway: not_defined # 1 208 1 208 208 354 100.0 1e-96 MEAKDTTGHLEHLPIEQLRNYSRNPRKGSIPAIKNSLKSHGQFKPLLVNTGTQTGEEWAV LAGNHTLAAMRELNAEAQEEGLDQPHLMVPCYIIDVDATQAAEIVLVDNKTSDEATYNDE ALLDLLDWLPDLDATGYTQEDLTALEDALNPAEEPPQEDVTNPYEDFITVRLQLPPHLAR QWLTHTTAFDSDEEALEYLLDHNGQEAG >gi|227860827|gb|ACLH01000093.1| GENE 89 89011 - 89187 125 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGAVPRLKAPLPARATGATVTAEANDPWDPQPAIAAMQEAFDGAATNLSLPRSTVAPG >gi|227860827|gb|ACLH01000093.1| GENE 90 89127 - 89756 444 209 aa, chain - ## HITS:1 COG:TM0528 KEGG:ns NR:ns ## COG: TM0528 COG0223 # Protein_GI_number: 15643294 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Thermotoga maritima # 3 200 2 209 313 71 23.0 9e-13 MAKIYLAGSGAFGAACAQALTNAGHTLLGIAAPEEGRGGRGEALTNWAMSRHLPRTSNAL LRADDIPDGTDLILTAHSHAFVGRKTRARAPYALGYHPSLLPLHRGRAAVEWTARMNERV TGGTIYHLTDNVDGGPIAAQRHVILPPHLTASEIWREYLFPLGVEMVVDTADAVDAGNVP YQPQDERKATWEPSLDSKPLYRPELLELP >gi|227860827|gb|ACLH01000093.1| GENE 91 89757 - 90872 301 371 aa, chain - ## HITS:1 COG:APE2272 KEGG:ns NR:ns ## COG: APE2272 COG2401 # Protein_GI_number: 14601958 # Func_class: R General function prediction only # Function: ABC-type ATPase fused to a predicted acetyltransferase domain # Organism: Aeropyrum pernix # 28 176 471 646 660 67 33.0 4e-11 MFNATSEQATHFSLDATLGVEEDGDWQIGVVVGPSGSGKTSIGRQLFGGGHIYEPSGWEH DKPIVDCIAPGGDFDAVTGALSQAGLGDVPAWLRPYHVLSNGQKFRADLAKILAERPDRV IIDEFSSVVDRQIARVGAGAFAKGWRRGPGKAVLLSCHYDVLDWLEPDWVFDTATGEFRG REGVQHFKRPRIDVEIRMGGWELWPLFKPHHYLDSGPMPMAKCYAGFVDGEPVVHLGVGT RNVPVRRNGRRLQAVEARACRMVTMPEWQGAGVGTRFLNTVCQIQLDGNGVLPGRKMTTV FHTSHPALCGYLRHSGKWRQVSSMTSGVNKGRSETSMAATSSRGRKLGYGGHLRAVQGFR YYGDNYKKGTP >gi|227860827|gb|ACLH01000093.1| GENE 92 90945 - 91562 684 205 aa, chain - ## HITS:1 COG:no KEGG:cauri_1994 NR:ns ## KEGG: cauri_1994 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 205 1 205 205 382 100.0 1e-105 MTEKDTANIGTPQRVPLTDLNLYHKNPRVGDTQAIKGSIVANGIFRPVVVNKGTYTDKPN EILAGNHTAKAIRELAEEHPDDARWQHVDVWMVDVDSERAARIVLADNRTADLGSYDNEE LLGLLETVDYDLDGTGYDYGDVDDLRSLVEENGEAPGSAGLLDEPDTDTYRETYAVTVVC SDAEEQEKVFNRLTGEGYDCKVVTV >gi|227860827|gb|ACLH01000093.1| GENE 93 91609 - 91848 126 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184761|ref|ZP_06044182.1| ## NR: gi|262184761|ref|ZP_06044182.1| hypothetical protein CaurA7_12259 [Corynebacterium aurimucosum ATCC 700975] # 1 79 1 79 79 144 100.0 2e-33 MRYDVWFNFNHPQVAEIRALDGDTLKTVDWFYIPAGCLVDSPSSPGDWHTLRTWELRWLF KSYGWRLISEGDSVWAEKL >gi|227860827|gb|ACLH01000093.1| GENE 94 91845 - 92270 237 141 aa, chain - ## HITS:1 COG:no KEGG:cauri_1995 NR:ns ## KEGG: cauri_1995 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 141 1 141 141 283 100.0 1e-75 MAIKKSPLWHSREEFRGLLADHETLNYLRSAEHMKLEICTLHLPPHLKRRVCDAADQWGI ARNGMLIEIILGYLSSDTQYTPENRVVANTRTAEQTSFRLPSPAIDHMRWLADARGITIS QLTADMIVEYFNNAETEDDAA >gi|227860827|gb|ACLH01000093.1| GENE 95 92270 - 92461 261 63 aa, chain - ## HITS:1 COG:no KEGG:cauri_1996 NR:ns ## KEGG: cauri_1996 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 122 100.0 5e-27 MSIEQRLNEEVQVYRLGDGLSFTPTGKHPTGVLIGVFYHEGDQIGRGCLKVNGDQYDALL GGC >gi|227860827|gb|ACLH01000093.1| GENE 96 92561 - 92833 388 90 aa, chain - ## HITS:1 COG:no KEGG:cauri_1997 NR:ns ## KEGG: cauri_1997 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 90 1 90 90 152 100.0 3e-36 MNPQTTTLTVNGWTITVTGNKNMHFVNIEQRDDIAANITWEDDQAKVTPRILSSMTVDEA NDYAVQISIAADVALKITGQVKEIVRKFPA >gi|227860827|gb|ACLH01000093.1| GENE 97 92925 - 93356 464 143 aa, chain - ## HITS:1 COG:CAC1425 KEGG:ns NR:ns ## COG: CAC1425 COG0756 # Protein_GI_number: 15894704 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Clostridium acetobutylicum # 7 139 9 141 145 82 35.0 2e-16 MNVNYSLDTHAYPPRRAYTDDAGTDLALNHPAVIPAGQHRLCHTGVHVAIPKGHVGMMFV RSSTGIKKHLVLSNGTGIIDAGYTGEIVLSLHNTGRHMQTIPEGHYIAQLVILPIPEVRL NQVPQLSATERGSDGIGSTDSTA >gi|227860827|gb|ACLH01000093.1| GENE 98 93363 - 93569 252 68 aa, chain - ## HITS:1 COG:no KEGG:cauri_1999 NR:ns ## KEGG: cauri_1999 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 68 1 68 68 117 100.0 1e-25 MPYQRMTAADLPRYKVCRIVLNPDSYDPRLVPDRLVYAAQEGDHVSGATRDGRFALPAAA PVLIDPES >gi|227860827|gb|ACLH01000093.1| GENE 99 93610 - 93846 224 78 aa, chain - ## HITS:1 COG:no KEGG:cauri_2000 NR:ns ## KEGG: cauri_2000 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 78 12 89 89 140 100.0 2e-32 MPPYKPLVGEVQRVKVDGTVESCTQARRDRPEPPELQFEEPEPGLFRRCHQFYKRDHYGE PIQPKPMWDVLDLWYEES >gi|227860827|gb|ACLH01000093.1| GENE 100 93876 - 93986 98 36 aa, chain - ## HITS:1 COG:no KEGG:cauri_2001 NR:ns ## KEGG: cauri_2001 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 36 1 36 36 65 100.0 5e-10 MSKIIDILSTAYTPDGGLADPNHPVYALLWLLKVFA >gi|227860827|gb|ACLH01000093.1| GENE 101 94043 - 94369 114 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184769|ref|ZP_06044190.1| ## NR: gi|262184769|ref|ZP_06044190.1| hypothetical protein CaurA7_12299 [Corynebacterium aurimucosum ATCC 700975] # 1 108 1 108 108 215 100.0 8e-55 MRGDAYHWAEDAKCRSLHPDIFDLQGDKRPLEAKRSMARRLCEGCPVIAECAEDVLRHDS FGLVRAGLWTTGWMCGGPANPGGKRGALVKELQFIAATGRLPELEEAI >gi|227860827|gb|ACLH01000093.1| GENE 102 94369 - 94521 102 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184770|ref|ZP_06044191.1| ## NR: gi|262184770|ref|ZP_06044191.1| hypothetical protein CaurA7_12304 [Corynebacterium aurimucosum ATCC 700975] # 1 50 1 50 50 95 100.0 1e-18 MFCEVGGGVREVGTYRSKWAANFRVRILSEAGIEAWTKPEMRLLFNEVSY >gi|227860827|gb|ACLH01000093.1| GENE 103 94529 - 94711 109 60 aa, chain - ## HITS:1 COG:no KEGG:cauri_2002 NR:ns ## KEGG: cauri_2002 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 60 9 68 68 109 98.0 4e-23 MQRWGREDDTWSWFGTSEHATPNGAVKEMRRMETLFPRAVFRVVERHVQEVIYRVPAENG >gi|227860827|gb|ACLH01000093.1| GENE 104 94875 - 95135 418 86 aa, chain - ## HITS:1 COG:no KEGG:cauri_2004 NR:ns ## KEGG: cauri_2004 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 86 1 86 86 162 100.0 5e-39 MTDPYLAIKGLTALAESLGFSITPSSTGPYIYTGLDTFLKLDTEINEGWGSDEEYNTYYF DLDNPQEIGDCAALLTRLAEHQPETV >gi|227860827|gb|ACLH01000093.1| GENE 105 95195 - 95389 401 64 aa, chain - ## HITS:1 COG:no KEGG:cauri_2005 NR:ns ## KEGG: cauri_2005 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 64 1 64 64 116 100.0 3e-25 MTTYARRDDAITREIIEPLGEYAAEHNIDAIADELIICDGTGLDPVYYINPDADFWNIVA NNAL >gi|227860827|gb|ACLH01000093.1| GENE 106 95482 - 95958 432 158 aa, chain - ## HITS:1 COG:no KEGG:cauri_2006 NR:ns ## KEGG: cauri_2006 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 158 1 158 158 301 100.0 8e-81 MTTPFLMSYPDDPKHLATIELPWEKPPLSLNDSAPASRGAVWGRAAKKREIQQAVHLLAR NVRMPEGMHYLIVQLHYRPRDNRGRDTDNVAASGKPIYDALSRGSKQIPGLGLVPDDLPK FMGKPEPVIWSAAKGLRGRMWMDLWVCESAPEPYVRAG >gi|227860827|gb|ACLH01000093.1| GENE 107 95955 - 96521 191 188 aa, chain - ## HITS:1 COG:no KEGG:cauri_2007 NR:ns ## KEGG: cauri_2007 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 188 1 188 188 353 100.0 1e-96 MKPACTNTKNRAFINPARAPHNSIEAALKMCHACPLLKHCASDALTSGTSLSEDLRAPAA DVIQAGVVCHGDLDTAYKLAAIAQVEVPAYLIETTRRDNIGARRPDRCRNCNRPMIKWNR HEEQPEGYQMHYARGFCTACRSAYAQWKKENPTEQRGLRKPIDRKRHSAPPRKRGAVTIQ PTLFEIPA >gi|227860827|gb|ACLH01000093.1| GENE 108 96451 - 96630 107 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLCGALAGLMNARFLVLVQAGFTTFPSGAGGILVSWAIVHRSILCANTPHLAGRNKTP >gi|227860827|gb|ACLH01000093.1| GENE 109 96663 - 96878 100 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSPQTSRQYLRLLGTQINLNTRDFQRYSGVLVTWRRVSKRLHTDSATSGLNNGRRHGVSS LSAANEGHIRT >gi|227860827|gb|ACLH01000093.1| GENE 110 96923 - 97387 459 154 aa, chain - ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 6 154 7 164 164 115 43.0 3e-26 MTIQDVTIVGNISTDVELRYTPQGTPVAQFSVAVNERRLNRETNQWEDGDTTFYRVSAWK QLGEHAAETLAKGMEVIVKGKFTARNYTTREGVERTALEVTVNPGKGALGPSLMWMVGSM SKAQQGGGQQAPQQDPWNSAPQGGFSGGSSEPPF >gi|227860827|gb|ACLH01000093.1| GENE 111 97460 - 97894 293 144 aa, chain - ## HITS:1 COG:no KEGG:cauri_2009 NR:ns ## KEGG: cauri_2009 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 144 1 144 144 239 100.0 2e-62 MRKILTVACAAPLLLSGCGGGAEDTPTPTSEQVTATEAAPGKTAPETFESAIQVLNYLQG QNVTCANTDSIEQGLTCETSGVSYIVNTDPTGKLVQAMVGAAEQVDNTALIYGDHWYISC AGVSAPTACASAGASLTGYEKAGF >gi|227860827|gb|ACLH01000093.1| GENE 112 97912 - 98136 211 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184780|ref|ZP_06044201.1| ## NR: gi|262184780|ref|ZP_06044201.1| hypothetical protein CaurA7_12354 [Corynebacterium aurimucosum ATCC 700975] # 1 74 2 75 75 99 100.0 6e-20 MTDDELAALQGRYLKDAKKAHREVEDLKDAMRAAKTKRSNAVRRASAAGVPMGKMAEQLG VSKPMLSLIAKGER >gi|227860827|gb|ACLH01000093.1| GENE 113 98174 - 98476 322 100 aa, chain - ## HITS:1 COG:no KEGG:cauri_2010 NR:ns ## KEGG: cauri_2010 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 100 1 100 100 195 100.0 4e-49 MSRWRIFKAYYEWHVYEYGRERYESFPTWREAMDYADRYSRLAPDITIEDPSGAFCDLTA TNKREYIHLKSGGDTFNLAPHEWKPLAGFLLDVANLVEEA Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:11:37 2011 Seq name: gi|227860826|gb|ACLH01000094.1| Corynebacterium aurimucosum ATCC 700975 contig00175, whole genome shotgun sequence Length of sequence - 46449 bp Number of predicted genes - 64, with homology - 60 Number of transcription units - 17, operones - 12 average op.length - 4.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 339 174 ## cauri_2016 hypothetical protein 2 1 Op 2 . - CDS 339 - 878 493 ## cauri_2017 hypothetical protein 3 2 Op 1 . - CDS 983 - 1282 362 ## cauri_2019 hypothetical protein 4 2 Op 2 . - CDS 1360 - 1653 367 ## cauri_2020 hypothetical protein 5 2 Op 3 . - CDS 1737 - 1994 360 ## cauri_2021 hypothetical protein 6 2 Op 4 . - CDS 2082 - 2534 313 ## cauri_2022 hypothetical protein 7 2 Op 5 . - CDS 2531 - 3394 369 ## cauri_2023 hypothetical protein 8 2 Op 6 . - CDS 3424 - 3723 130 ## 9 2 Op 7 . - CDS 3792 - 4451 351 ## MMAR_3903 hypothetical protein - Prom 4534 - 4593 3.0 10 3 Op 1 . - CDS 4644 - 5717 955 ## cauri_2024 putative secreted protein 11 3 Op 2 . - CDS 5720 - 6286 255 ## cauri_2025 hypothetical protein 12 3 Op 3 . - CDS 6290 - 6877 493 ## cauri_2026 hypothetical protein 13 3 Op 4 . - CDS 6951 - 7145 222 ## gi|262184791|ref|ZP_06044212.1| hypothetical protein CaurA7_12413 - Prom 7213 - 7272 5.6 + Prom 7098 - 7157 4.5 14 4 Tu 1 . + CDS 7226 - 7660 324 ## cauri_2027 hypothetical protein - Term 7408 - 7461 1.5 15 5 Tu 1 . - CDS 7601 - 7921 171 ## cauri_2028 putative phage-related integrase - Term 8982 - 9015 -0.2 16 6 Op 1 . - CDS 9160 - 9753 545 ## cauri_1899 hypothetical protein 17 6 Op 2 . - CDS 9815 - 10105 322 ## cauri_1900 hypothetical protein 18 6 Op 3 . - CDS 10115 - 10408 170 ## cauri_1901 hypothetical protein 19 6 Op 4 . - CDS 10444 - 10800 316 ## cauri_1902 putative secreted protein 20 6 Op 5 . - CDS 10820 - 11173 61 ## gi|262184798|ref|ZP_06044219.1| hypothetical protein CaurA7_12448 21 6 Op 6 . - CDS 11204 - 11533 231 ## cauri_1903 hypothetical protein 22 6 Op 7 . - CDS 11533 - 12759 906 ## cauri_1904 hypothetical protein 23 6 Op 8 . - CDS 12816 - 14396 1052 ## cauri_1905 hypothetical protein 24 6 Op 9 . - CDS 14409 - 15485 992 ## cauri_1906 putative phage tail 25 6 Op 10 . - CDS 15552 - 16082 587 ## cauri_1907 hypothetical protein 26 6 Op 11 . - CDS 16085 - 16780 344 ## cauri_1908 hypothetical protein 27 6 Op 12 . - CDS 16782 - 17183 470 ## cauri_1909 hypothetical protein 28 6 Op 13 . - CDS 17184 - 18644 1002 ## COG0739 Membrane proteins related to metalloendopeptidases 29 6 Op 14 . - CDS 18694 - 20181 1051 ## cauri_1911 hypothetical protein 30 6 Op 15 . - CDS 20175 - 20903 412 ## cauri_1912 hypothetical protein 31 7 Op 1 . - CDS 21101 - 26206 4604 ## COG5412 Phage-related protein 32 7 Op 2 . - CDS 26216 - 26662 244 ## gi|227505832|ref|ZP_03935881.1| hypothetical protein HMPREF0308_2102 33 7 Op 3 . - CDS 26560 - 27033 622 ## cauri_1914 hypothetical protein - Term 27048 - 27094 13.2 34 8 Op 1 . - CDS 27106 - 27690 856 ## cauri_1915 hypothetical protein 35 8 Op 2 . - CDS 27700 - 28134 266 ## cauri_1916 hypothetical protein 36 8 Op 3 . - CDS 28131 - 28463 286 ## cauri_1917 hypothetical protein 37 8 Op 4 . - CDS 28456 - 28845 183 ## cauri_1918 hypothetical protein 38 8 Op 5 . - CDS 28827 - 29243 405 ## cauri_1919 hypothetical protein - Term 29258 - 29299 6.5 39 9 Op 1 . - CDS 29316 - 30218 1209 ## cauri_1920 hypothetical protein 40 9 Op 2 . - CDS 30227 - 30973 896 ## cauri_1921 hypothetical protein 41 10 Tu 1 . + CDS 31078 - 31617 325 ## cauri_1922 hypothetical protein + Term 31666 - 31701 5.1 + Prom 31849 - 31908 5.0 42 11 Op 1 . + CDS 31941 - 32399 603 ## cauri_1923 hypothetical protein 43 11 Op 2 . + CDS 32415 - 32861 570 ## cauri_1924 hypothetical protein + Term 32922 - 32966 3.2 - Term 32910 - 32953 3.0 44 12 Op 1 . - CDS 33028 - 34161 736 ## cauri_1925 putative phage minor capsid protein 45 12 Op 2 . - CDS 34161 - 35699 1265 ## cauri_1926 hypothetical protein 46 12 Op 3 . - CDS 35709 - 36974 877 ## cauri_1927 phage terminase large subunit 47 12 Op 4 . - CDS 36967 - 37404 610 ## cauri_1928 hypothetical protein 48 13 Op 1 . - CDS 37598 - 38113 634 ## cauri_1929 hypothetical protein 49 13 Op 2 . - CDS 38155 - 38436 189 ## gi|262184826|ref|ZP_06044247.1| hypothetical protein CaurA7_12588 50 13 Op 3 . - CDS 38500 - 38664 95 ## cauri_1930 hypothetical protein 51 13 Op 4 . - CDS 38716 - 38829 130 ## - TRNA 39070 - 39153 55.8 # Leu TAG 0 0 - TRNA 39155 - 39225 44.2 # Gln TTG 0 0 52 14 Tu 1 . - CDS 39668 - 39847 109 ## gi|262184829|ref|ZP_06044250.1| hypothetical protein CaurA7_12603 53 15 Op 1 . - CDS 40198 - 40542 414 ## cauri_1933 hypothetical protein 54 15 Op 2 . - CDS 40536 - 41288 174 ## 55 15 Op 3 . - CDS 41281 - 41499 91 ## cauri_1934 hypothetical protein 56 15 Op 4 . - CDS 41502 - 42488 1067 ## COG0208 Ribonucleotide reductase, beta subunit 57 15 Op 5 . - CDS 42500 - 43060 541 ## COG0756 dUTPase 58 16 Tu 1 . - CDS 43575 - 43946 324 ## cauri_1937 hypothetical protein 59 17 Op 1 . - CDS 44167 - 44436 203 ## cauri_1938 hypothetical protein 60 17 Op 2 . - CDS 44433 - 44549 110 ## 61 17 Op 3 . - CDS 44534 - 45319 871 ## COG0863 DNA modification methylase 62 17 Op 4 . - CDS 45322 - 45597 160 ## gi|262184839|ref|ZP_06044260.1| hypothetical protein CaurA7_12653 63 17 Op 5 . - CDS 45627 - 45806 318 ## cauri_1940 hypothetical protein 64 17 Op 6 . - CDS 45891 - 46118 328 ## cauri_1941 hypothetical protein - Prom 46151 - 46210 5.1 Predicted protein(s) >gi|227860826|gb|ACLH01000094.1| GENE 1 3 - 339 174 112 aa, chain - ## HITS:1 COG:no KEGG:cauri_2016 NR:ns ## KEGG: cauri_2016 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 112 1 112 234 233 100.0 2e-60 MANPFSCIANDTARYFTHQGISCMTQLGPFTINGYIELPENHPWLDFPDTLEVHPDIEVH GGITYHEGRVIGFDTNHLGDGQHPDAPNAYPSHFTGHTWTWEEVEAETRRLA >gi|227860826|gb|ACLH01000094.1| GENE 2 339 - 878 493 179 aa, chain - ## HITS:1 COG:no KEGG:cauri_2017 NR:ns ## KEGG: cauri_2017 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 74 179 1 106 106 207 100.0 1e-52 MSSRTLDLIFIDLALLITIVWAPVVAGVQAGRSFHWSIGIAVAVLLSAISVAFWYRFATS PASLPGQDWEGGRMSLPYPRYDEPHDDYTEVEAVATLAHPDGTTTRHGLIMNAPVYDERP DLLEAWDNEDYEPVNFDEFAQAMRSAEELVDLDIWDGVTPEFDQLYRPSALTLAMRKAS >gi|227860826|gb|ACLH01000094.1| GENE 3 983 - 1282 362 99 aa, chain - ## HITS:1 COG:no KEGG:cauri_2019 NR:ns ## KEGG: cauri_2019 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 99 1 99 99 191 100.0 7e-48 MSVTTSSVYSHNGLAYEMRVTETGKRPQDKDVEIEYLGDDKASPFSLSAYWNGVKEVWDV KVEFLPRIARDSLNLRSYVEDVQLGVEMVTEFREILNAG >gi|227860826|gb|ACLH01000094.1| GENE 4 1360 - 1653 367 97 aa, chain - ## HITS:1 COG:no KEGG:cauri_2020 NR:ns ## KEGG: cauri_2020 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 97 1 97 97 196 100.0 2e-49 MDLVEVTHEYIASVKVTTQTYDLYRDVFIYDNGEQRPCYTLRSPKDESKYWAGRNLTSTD NSAAGTYMFATVMGPPIKRQGNIVKFFIAGDMIERVK >gi|227860826|gb|ACLH01000094.1| GENE 5 1737 - 1994 360 85 aa, chain - ## HITS:1 COG:no KEGG:cauri_2021 NR:ns ## KEGG: cauri_2021 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 85 1 85 85 163 100.0 2e-39 MNSTDYYVAYNITNESDLDMVTVGGQPKYHLGGNSFMCRIAIIEGYTKAEKETFERIISI SENGAEVEVYDWTPANCDMYAKVNS >gi|227860826|gb|ACLH01000094.1| GENE 6 2082 - 2534 313 150 aa, chain - ## HITS:1 COG:no KEGG:cauri_2022 NR:ns ## KEGG: cauri_2022 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 150 1 150 150 269 100.0 3e-71 MSTPQQRELAAYVLEYGKRLAPDRFPQPSAEVVDAWGDVLATVSLPPQVWPDAVKLWALE LAGPRMVTPRDLKQAAFAVRDRWESDPVRKRQLDAHRERLRKERDAQLAAGTFGELRGYK PLEVGHAGEVDTAGIVERIKRGLRGRTGNS >gi|227860826|gb|ACLH01000094.1| GENE 7 2531 - 3394 369 287 aa, chain - ## HITS:1 COG:no KEGG:cauri_2023 NR:ns ## KEGG: cauri_2023 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 287 12 298 298 502 99.0 1e-141 MRFASVPHQLLDEVADPVAIALYAHLMKFADWSTGLAHPKRETLAKLMGYKTTKSVDAAV KVLAKAGWLEVFPRWSRWNEETNALEVIYESRKGFNQTSNGYRLFDRPRRSGGVGTPEGP HPLPTSDPSPCPQGYTNKNHKNENHRTKDIDHPADDRFDEFWGTVPRKVGKGAARKAWAK AVKKADPQVIIEGMRRYRDDPNREDEFTAHPSSWLNAERWDDDPLPARGGGQKAPSFLDF APSSSTPRNPSFNAPYGGELPSSTYSPLPPGIEPPTGPQALFEEYPE >gi|227860826|gb|ACLH01000094.1| GENE 8 3424 - 3723 130 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFKRARGLCEAGLPGCEKNATDFHHRQRRQRGNDTVVNSAALCRACHHHITHVSPAEGRE RGLIVHSHHPDPGSVPMCVRGRWFMLLPDGGMEATEARP >gi|227860826|gb|ACLH01000094.1| GENE 9 3792 - 4451 351 219 aa, chain - ## HITS:1 COG:no KEGG:MMAR_3903 NR:ns ## KEGG: MMAR_3903 # Name: not_defined # Def: hypothetical protein # Organism: M.marinum # Pathway: not_defined # 9 210 8 212 225 108 36.0 1e-22 MKRSPSKTQCSVEWCDRPSRARSMCTKHYQQVKSWGEVRPDKEKFSVCQADGCERKPRSG GASYCEMHYYRLRRNGTLSIVAPRVPDSECVVGGCDKKAFTTEGLCRNHSLGMKRNGDLK NHARGELAYNWVSESELGYKNAHRRVKTARGSASKYSCVDCGRKARHWSYNHCAEHELSE THEKGGVVSYSANIWDYSPRCVSCHKKFDLNIIEAKGGK >gi|227860826|gb|ACLH01000094.1| GENE 10 4644 - 5717 955 357 aa, chain - ## HITS:1 COG:no KEGG:cauri_2024 NR:ns ## KEGG: cauri_2024 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 357 1 357 357 649 100.0 0 MEFTTRRPSCKASFPLVLLAGVEGAGKTWAAVESTSMSAVDKAFFIEVGESQADAYGAVP GADFLIVEHDGTVGQIRGAIHWASQQAPAEGKHNLLIIDSMTEIWQLLQDNGQEEANRRA RSKGRKVPEDGVRLSMDLWNQIKSTWNGILQQCRQFPGPVLMTSRLELVTAMDEKGNPTR DKFWKVQAEKNLPFNCQVVVQARAPRQWTMTKIATTVPELQLQPGAEMTFNDFSVAKLLD GMGIGADAAPSTFVETRPDGEFSEEKQAAKAAEEQAEERKAYVSKQTQGLLQAESSGDVD TLRRALRYYESRSDRELVGMARDTLDRLEKAQRMEKAQETVGNVLDGEVVEPTADAA >gi|227860826|gb|ACLH01000094.1| GENE 11 5720 - 6286 255 188 aa, chain - ## HITS:1 COG:no KEGG:cauri_2025 NR:ns ## KEGG: cauri_2025 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 188 1 188 188 376 100.0 1e-103 MGEEIWKPVIGFEGLYEVSSHGKIKSLQRKVPHKSSGTITVRERILKPGVRKSGHLYVNL LKDSHPRTKRVHVIVAEAFIGPRSAGMEVCHNDGNPANNRVENLRYDTHAENIRDIIRHG THFQSKKTTCKRGHLLTAPNLVPSIAKKGYRDCLACSRTRAYLINHPGLADTAQELSDSY FNTIMERK >gi|227860826|gb|ACLH01000094.1| GENE 12 6290 - 6877 493 195 aa, chain - ## HITS:1 COG:no KEGG:cauri_2026 NR:ns ## KEGG: cauri_2026 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 195 1 195 195 351 100.0 1e-95 MHTHDNTPTPALETAERDPYEKVLLQAVVLRKLNGIHKEFKDSITRDMNPGDKRTVKNAQ GLELGSVSKSAPGMKAVCTDSAVLLAMAEEQGREIVDGLPSPSDPRHEEIIRLLMELGRT DLLESAVVKEDADEIAAKVLEDWQISGHLPTGWEIKEASSPRVAINSKRSNAARAAIDHL VKEAGTVLALEAGEK >gi|227860826|gb|ACLH01000094.1| GENE 13 6951 - 7145 222 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184791|ref|ZP_06044212.1| ## NR: gi|262184791|ref|ZP_06044212.1| hypothetical protein CaurA7_12413 [Corynebacterium aurimucosum ATCC 700975] # 1 64 1 64 64 120 100.0 3e-26 MAYKNDGLYNQKEACQYLGGISRNTLYLLRRDGLLAETKLGWRVFFKKADLDRCIEMQEL LNAA >gi|227860826|gb|ACLH01000094.1| GENE 14 7226 - 7660 324 144 aa, chain + ## HITS:1 COG:no KEGG:cauri_2027 NR:ns ## KEGG: cauri_2027 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 144 1 144 144 244 100.0 1e-63 MYYPVPRKIKYTPTDNLIAMTTPQQWPAGQLLQHAREREGLSKAEAARRSRLSESWWRRL ETGINIRDGKKIPITPTPEALAKAAQAVNLPVNQVLEAAGLAPERENPEDLQDEAAQLLK ALPIPLQREAVAYLRGLTVGSRQG >gi|227860826|gb|ACLH01000094.1| GENE 15 7601 - 7921 171 106 aa, chain - ## HITS:1 COG:no KEGG:cauri_2028 NR:ns ## KEGG: cauri_2028 # Name: not_defined # Def: putative phage-related integrase # Organism: C.aurimucosum # Pathway: not_defined # 1 106 317 422 422 184 100.0 8e-46 MWVSERGLPLRPKVALARWKSALKAAGLPVVDLHTARHTAASLLAECGVPPQVIGVILGQ STVDTTLGYVHVGRAQAQAALAQYAERLALPTSYGQSPQVGDGFPL >gi|227860826|gb|ACLH01000094.1| GENE 16 9160 - 9753 545 197 aa, chain - ## HITS:1 COG:no KEGG:cauri_1899 NR:ns ## KEGG: cauri_1899 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 197 1 193 193 325 100.0 6e-88 MEETMTLEEIIAAIKQLDDQDFNALSDEMYTMREERRARPAIEQAKQEAESETATKIAQQ LAEEHPEIVEKPTETADGSIREWEPWNPLKPSTHYRYGDLTQHGGKVWRDVLDPTGDKLN VWEPGAQGIDERYWIEESETSETPAEGDARVEEFVQPTSEKPYQVGDKVKFEGAVWESTI ANNVWSPSAYPTGWKKL >gi|227860826|gb|ACLH01000094.1| GENE 17 9815 - 10105 322 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_1900 NR:ns ## KEGG: cauri_1900 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 5 96 1 92 92 177 98.0 1e-43 MVVAVALKRISQPLTELGSSEHLDNLTTTGVYHQALSRNAEVNNGYPEAQAGLLEVISPS GVQMVYQRYTIYNSRGMYFRGFYGSSWGPWKKVLTE >gi|227860826|gb|ACLH01000094.1| GENE 18 10115 - 10408 170 97 aa, chain - ## HITS:1 COG:no KEGG:cauri_1901 NR:ns ## KEGG: cauri_1901 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 97 1 97 97 172 100.0 5e-42 MALRKIGTSRDVAAYTLTGDSGWRTPTGKNQTWVTTGETSITLEPGTYLIEGPPSVAQYN RSPWTNEGIITTPAVVEYSEDKQLYCQYSGVLKITRL >gi|227860826|gb|ACLH01000094.1| GENE 19 10444 - 10800 316 118 aa, chain - ## HITS:1 COG:no KEGG:cauri_1902 NR:ns ## KEGG: cauri_1902 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 204 100.0 7e-52 MALRLIRKPLEVLTGTTGTGTGLLTVTGSWGTYFTAPNDGVAHVAVTGDVEQICVWVRDT DGLNIQTFRARRGAESMEQCCLNVMVPLSRGQRWFVQAEGQSKTVTVMHDFKPVPPPA >gi|227860826|gb|ACLH01000094.1| GENE 20 10820 - 11173 61 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184798|ref|ZP_06044219.1| ## NR: gi|262184798|ref|ZP_06044219.1| hypothetical protein CaurA7_12448 [Corynebacterium aurimucosum ATCC 700975] # 1 117 1 117 117 227 100.0 2e-58 MALKLIGASGGAVCAGNSDRSDMQRAYMTWDTMRVPGTWKSDKVSVTPPPGWYRFRLWVS ENLIVSPNGVGLPGDVSLATTGMAAPAIDTICQVADVVNVRYRADRPCEYRMELTPI >gi|227860826|gb|ACLH01000094.1| GENE 21 11204 - 11533 231 109 aa, chain - ## HITS:1 COG:no KEGG:cauri_1903 NR:ns ## KEGG: cauri_1903 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 107 1 107 244 211 100.0 8e-54 MALRLIRQANETVRLDVTQGTGWKPAARGKFDASVNAYPELATIQATGCTGLRVYDYDAP GQPFWESTTGTSHTVTVIKTVRRLVVRAENTTDDTEVIMHVVPIPPPTS >gi|227860826|gb|ACLH01000094.1| GENE 22 11533 - 12759 906 408 aa, chain - ## HITS:1 COG:no KEGG:cauri_1904 NR:ns ## KEGG: cauri_1904 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 408 1 408 408 548 100.0 1e-154 MKYTRVRRAVSAVVIDSWDEDRDPEHIKVNGRVTFTPLLKDGDVVQWAGPNGPESLVLAP IECRISDGIIMHRGGEGVYLAAGGKGCEPSLIQWKATFSNMQAGGWSFKLKPVMFDAVPD GEVDLTMVAPVAGASEPIVRGPAGTGIDNIKVDGAELVITARSEAGVFEMARIPLEDVVK AEAAAAAKSATDNVRTEFNASVTNAANSAKSAAASAKTATTKASEATTQAANAANSASAA KDSAAKASASASAATASANNASTSETKAAGSASGAKASASSAASSASKAATSETNAASSA TSAKQDADRAANIANSTSWNGDKLTVNGQTSPSLTGPKGPRGPTGNAGPKGEPGEVTMAD FRPVRDAVEVRPNGWIIKSASDLAATEKKARPGDLIHVVETRETWEVY >gi|227860826|gb|ACLH01000094.1| GENE 23 12816 - 14396 1052 526 aa, chain - ## HITS:1 COG:no KEGG:cauri_1905 NR:ns ## KEGG: cauri_1905 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 526 1 526 526 625 100.0 1e-177 MAEMDPGKDPWLEDEAERRTLDYGGTPPNPENSRTRADTFGIRPDIWDSLNQAITKKATV DELLEQARRRQEDARKYLADAAAAREQADKALAESDKAVQKAGQAQQQARQAVDASNSAL GDAAAAREDARKSLQDAQQSLQNSQDALNDAQDARARATTAVANAATARTNADKALNDSG KALTQAGQAVSEARSAVSTSGDALAKAKAADLTSEEGRKTAIEALTKAVHATNTAVSANS TAIEANSTAIASTNKAVAALTQASAANSRAVDALSQASEANSRAITATNTAVAANSKAVE SALLSSQANSTAIASTNKAVSAAVTASEANSTAITATNRAVAALRAANSANSSAIKAVTD ASEANTKAISLLHLLNHGTWNLSSTYTIGTSWRSLEFNSPKGESSGCSIFKFTNSDGTYI NFNEAGQWEVNLRIIIPAKPLLSIGGSSYVRISHMRKSEVVDSAVATGYDDGWPYTLPLT AIFNVQVGDYVYVSAKSDTTRGTSPLSNGRPDHEYTELSARQLSRA >gi|227860826|gb|ACLH01000094.1| GENE 24 14409 - 15485 992 358 aa, chain - ## HITS:1 COG:no KEGG:cauri_1906 NR:ns ## KEGG: cauri_1906 # Name: not_defined # Def: putative phage tail # Organism: C.aurimucosum # Pathway: not_defined # 1 358 1 358 358 689 100.0 0 MADSVPTYRDLETKLILRWIDVEDILATQRALIEVTPEAAFLELPRGRRGEKGEKGDAGA QMWIRDLITNRNQLPQNLREVDQGACYVDTNSRSAWVWNGSDYIEIPEFVGVRGEPGMTP RVQIGSVRPGGDASVSVNQAASTEDTFVLDFVLPQGPVGPPGEKGDEGSASNVSNSPDVD VTRPPVPGEALTWNGSKWAPRNVLAPIGPWVLGEGDFKSVSQGLIGSGNVSEKMIASYTV PGLPYDWHPVVLGGQLRVETPIGVQYDAEVRVGNAQRGDIIGRGIGKPFQRREDHTQIYP ATASRMTPGSAVGVVKANTATTIYVVLKKTRGTIGGWDFWRENSSLSFLAMPVNQAYA >gi|227860826|gb|ACLH01000094.1| GENE 25 15552 - 16082 587 176 aa, chain - ## HITS:1 COG:no KEGG:cauri_1907 NR:ns ## KEGG: cauri_1907 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 176 1 176 176 304 100.0 8e-82 MVPPELLDRLPNDGAWGIFVTVVLAIWIGVKTLAKADTDKMEQSFGWFGHKASQVVRWFR DKERRQIEHEQRLEDARVRVFEDKIKSLEGMIKRDRQWYEEQLHVERERNEAETQRLEQR IEDVVEERRVVEKWMEYAMQWASDVYSLAVQHSWNPTITPLMSFSVWRKTMQSDVD >gi|227860826|gb|ACLH01000094.1| GENE 26 16085 - 16780 344 231 aa, chain - ## HITS:1 COG:no KEGG:cauri_1908 NR:ns ## KEGG: cauri_1908 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 231 1 231 231 437 100.0 1e-121 MQWPKNRDSWLAQRQGDWSPGMPSLIFFIIFGLFTVQGANRGVDYITGDRPDVTQSLTVV EEAMPLQVWGVLFLMASLVVAVGMVFRRHNIIIAGCLYFVVLYSGITWGLTMKMLTRMTP MSEFWAALTDPDIHAPTPFMWVVIILMCVGCAALTVVVKKHRLLVGAVSALIILLTCMFA TYGHLATFIYHSAQTFPLDGWRTPSSFALTTTIWALFAWGTKVMQKARRGQ >gi|227860826|gb|ACLH01000094.1| GENE 27 16782 - 17183 470 133 aa, chain - ## HITS:1 COG:no KEGG:cauri_1909 NR:ns ## KEGG: cauri_1909 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 133 1 133 133 240 100.0 2e-62 MSNVNKADWPIRKILYILFGAALFVAITAGWVTDDQIETALSTTERVTAYLASAGLIFAA TKTHRGSDDKSTEADVLNAAVNASNQPQDTNSEVLLAQLQRQVADLTHLVEHPAQGPEDE VDQDAPGIYPTGA >gi|227860826|gb|ACLH01000094.1| GENE 28 17184 - 18644 1002 486 aa, chain - ## HITS:1 COG:MT0977 KEGG:ns NR:ns ## COG: MT0977 COG0739 # Protein_GI_number: 15840374 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Mycobacterium tuberculosis CDC1551 # 14 134 211 320 332 98 46.0 4e-20 MVTHPMKQGTYRVSSGYGSRWGTFHAGLDFAAPIGTPIYAAADGVVVQGKERYNVAGFGS WIWLDCQQSVGKDFIYGHVKHDGIMVKAGDRVHAGQQIGVVGNEGQSTGPHLHFEVWGHP GRLGGAHQDPAKYLQGAAQPGGVTKPVARPTPTPSNGHILGVDVSYFQNGMSLKRAASEG LSFAIIRTSDGTHRDWAYQSHMRDAESAGMVTAAYHYCRNPREGTSIQQQVATSVNVMGD MKRPIWLDCETPAGLSAQHVQEFKTEFERRGVRVIGIYSYIPWWEGKTIGGEPETAPYGK VWLAHYGSNPDGSPAQVYAARGGNDSRYWNYPLGNQKPVLFQYGSKAEVAGFADVDVNAF RGTKDQLKDLFYGTHTAKKEDLDLSDIDKKRIKYSLDQFVGYGTNKNGEPTFNGWDFDHL VKVANDKLANGKGLTLVEMVARTMDKQHRQETAITHLSESFDELINAVTALNDSVAQLAG ANPEVK >gi|227860826|gb|ACLH01000094.1| GENE 29 18694 - 20181 1051 495 aa, chain - ## HITS:1 COG:no KEGG:cauri_1911 NR:ns ## KEGG: cauri_1911 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 495 1 495 495 974 100.0 0 MVADINESYSANPLNLMVHNNEYTQRHRMPGYIDVELNAEFGLNAGTGTVTIPADHKLAA RIMQCDHDVVPVTAEFNGWRWTGRVESFEAAGKPGRETVTATLIDDKVQLGSVLAFANTR TGLALQGKRDHQAGPLESVVYHYLSENIARSGLPAYIVMPPKRVEDKSPRIDLSARMTNL DTLLRDILNQYDYDVECRMWWPGQPFPDGKVVPLVEGDRRERLHRLTHANIDQVFSPNDD PIQLPTKPGLIVAVRKVRERPHVRFSTRNGEVDSFTLSGKAPGAARQVVGGKSDDWVNET INLGIDFAIQGILTAIGGVAAGPVGALVGGAVGGIIKNQVEDTVLSFTDRTDVERAAQMG PFHLREGFTQSSAGTFTFDTSTLAERALLDAKGGKSVTMTMGHSISKVLGDDQRHSTGKI RYGYRIGDRVTFEEHLSGVVVSDIITGVTVKDNHDERMRISPRIGKRKNTSNPFIDFTDK MNKVTETVRDFGLAT >gi|227860826|gb|ACLH01000094.1| GENE 30 20175 - 20903 412 242 aa, chain - ## HITS:1 COG:no KEGG:cauri_1912 NR:ns ## KEGG: cauri_1912 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 242 68 309 309 483 100.0 1e-135 MDGAIYKGTIDEQATITLQVWVSDPRSSAWARRQHSLWRESLGRGKDTVRLFAVSKESGY WWIDARVESISDVNYFDQRPGLVGEIGELVTLKTDRSFWQRFEERKRFDRYTCRNAHMLN LGDQPAWLKWAVTGDHNGCYIGVDREEVYLPDPRTLRTEEELLAGMNPVHGYWIDTDELW PSFLTASGDDLQPDFPDTYWTKPLPPRGVHRGNTVPLNISPINPGENFRVEVSYIPRAEQ AW >gi|227860826|gb|ACLH01000094.1| GENE 31 21101 - 26206 4604 1701 aa, chain - ## HITS:1 COG:BH3518 KEGG:ns NR:ns ## COG: BH3518 COG5412 # Protein_GI_number: 15616080 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Bacillus halodurans # 93 343 40 293 940 152 40.0 4e-36 MALEVGTLNARIQIDADGVSSALSNVKRDLADVKKSADKVENLDIKTKADTSGATKAKRA TDNLASSADKAASASSKIKFPKDFTPDAERAKKSVDRVGDGLAGAAAKITKFTAATAGTA VVGGVAASLHKGFQRLDSIDQATAKLEALGNSGNDVQNIMDNALASVKGTSFGLGEAATV SANMVASGIAPGKELETVLGTVADTAAIAGTSMEDMGLIFGSVAARGKLQGDDMMQMLGR GIPVLQIVGEHLGKTSAEVSAMASDGEIDFQTFADAMESYVGGGAKRMGDTVSGALKNLG AAFGRVGAEAAKGAFSEAPAVISELTEQVDGLGAVVGPMAAEWSARLTPAIADAATAIIP QATAALGVLSDGVEVSLPLLQGLASAITSIPTPVLAAGLLTLTARNKGWTSALETSTGAL KNWVGYAKSADGFGGKMASAFRNASGPMMVLGRETRMSARELSGMSRVAGTAMGGMQSFG GAVKGVASGAMSGFKSGVSGIINMLGGPWGLAIMGATTVLGILIDKHMEAKQAEQEHEQA QRDLRSSLDETTGAITEQTQELINKRLEESGATAAARELGMAQDTVRDAVNGNADAMREV KVATEGAIDAALQSSDTYQSMAKDMEKAGITADDVRDALLGNQDAMDKINGSSWAMWQGN QGLWSALSNEMEDTTGAAITLGKEVGNLNGDLESVKAAALQDKLNGLQKQVDKTASVFDK LGDDIVAVPDEKTIQVSSMAPKVKTELEELGLEVKRLDDGSGRVNIEFPEGQSILTTLDQ LGAKVTALPDGRMDISDNADDVKQRLIDLGLAVKDETTGQVTITDNISDVIAREIEMGTA VTTNGDKTGHVHIFDNMADVMVGLEQLGFEASKDRNGNVIIADNTGDTMDRLKAMGIEAE KQRDGKVRITDNAEATRRHIQSTLSRERTNTVSEHMISITRRIKDIFERANGGIDKPVET YATGGHRDKNVDRAVARRANSNHEPSHQAQIAPAGAYRVWAEAETGGEAYIPMAPSKRGR SERILNEVARQFGYNLVDGETGMVQTFADGALLPASVVKHRLSYMDGTPYIFGGWSPAGV DCSGGVSLGVNALEGLDEWTERTGTANQAAFMRKRGWTPGRGHSGDNRVAFYNGGPGGGH TAMQLDDGTYIESGGNTGGGFTIGKTAGPLDGRGFTDWWYKPGAVRLTTEGLDSLDSLNG VVGAPGYSTVTGAMRGMVESTYSPDGGEAESRELNGGAGTLVKDGSFLELMAALYSKQTG TPMADDVVSWGTVVGLYSKESEKAQKKNAKDAEKTATKLEKIQDQLDKANEDLPLAEEDL RIKKMKRDEVYNKTNKKGEKTATDSQKAAADQSVAKAEKKVADTKAKIAKLEQEQKELED EMKRLQSGADGLDIYGDLLTTTKGVGGTSGNKYADAIIKEGRRRGITDTGIKIALATAIV ESGLKMYANNADPESLNFPYDAIGSDHDSVGLFQQRNNGAWGTTADRMDPAKSAGMFYDR LDDADYNQGDPGAHAQRVQGSAFPGRYATKMNEAQGYLDKYNSTKNAKITAMADGGILGG LRQAQINEGDSAVLWAEAGPEAYIPLSSDKRARSLDIWAETGKRLGVDVMSMLNFMASGL PGLMEGRLDFSTGETVSAERLGVNMDAAQYRTRRGAQATTQNAVGAVFNGPVQINDPKKY LQGQVDNAGKQLGMAMRSVLL >gi|227860826|gb|ACLH01000094.1| GENE 32 26216 - 26662 244 148 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227505832|ref|ZP_03935881.1| ## NR: gi|227505832|ref|ZP_03935881.1| hypothetical protein HMPREF0308_2102 [Corynebacterium striatum ATCC 6940] hypothetical protein HMPREF0308_2102 [Corynebacterium striatum ATCC 6940] # 79 146 1 68 69 96 66.0 6e-19 MGQKGVGETSGEGASGEETGSEEDHPQPQEDYLLDGPYGPYDPRPGAYGDDDPGGGPYDP ETGLRDWYAPEPHEAQKPVGQQKLQWVDVLNQWAAIECDLHEKYAVDVESGVLTQRTWRW LETRILDLINQPSRLRTALNLTSEQTSH >gi|227860826|gb|ACLH01000094.1| GENE 33 26560 - 27033 622 157 aa, chain - ## HITS:1 COG:no KEGG:cauri_1914 NR:ns ## KEGG: cauri_1914 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 1 157 157 298 100.0 3e-80 MRDLREFHDPNLYLPIDGTVYTVKSPNAELGLEIRRFTADPESDPAEEIYFVAKLLGAEY DKDTDSMSGGLWDEMVANGVPYEECMHVGNTAMAHYGVSPEFGEMWWETRLGKERPIQPE DIVAWARRAWEKPVEKEPVEKKPAAKKTTRSRKKTTS >gi|227860826|gb|ACLH01000094.1| GENE 34 27106 - 27690 856 194 aa, chain - ## HITS:1 COG:no KEGG:cauri_1915 NR:ns ## KEGG: cauri_1915 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 194 1 194 194 335 100.0 9e-91 MAVAKAPSSYDLNSTLARDWALQVNVGTQEEPNWIYVRGLSQFAPQSSPTMQDDSDIDSE GYKSQIATALEMTFKGEGKRKGKKTEGKFKQDPGQAALREKGRKMGLDNVIQARCWRTDG VEEGYDSYFSVKWEDQAGGNEDLDSFNFELMSRGKPVAIKPVTDDKGKSVPVEGEGDGPI MSGGTANESGATEQ >gi|227860826|gb|ACLH01000094.1| GENE 35 27700 - 28134 266 144 aa, chain - ## HITS:1 COG:no KEGG:cauri_1916 NR:ns ## KEGG: cauri_1916 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 144 1 144 144 280 100.0 2e-74 MTPTYGTLREDLARHLASNGLAQWAPTGIYKKFTPPAVYLGVLPDEAGPSIGLAVYHFGT EDTVQQDTGTPRIRVQLRIKGTRDPRYASRIADDVYQLLHERTNYQLDNGVSVLRSARVL TYEERDEASVYHRVESYEFVVNPN >gi|227860826|gb|ACLH01000094.1| GENE 36 28131 - 28463 286 110 aa, chain - ## HITS:1 COG:no KEGG:cauri_1917 NR:ns ## KEGG: cauri_1917 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 4 110 1 107 107 179 99.0 2e-44 MAELDWRGHEVARDIKQATTNALRAGAHLLRDEAVQRTPIETGTLRNSARASVEGNEAMV SYNTPYAARQHEEVGWQHKEGQAKYLESALLDNQTRISELIAKEIGKAMR >gi|227860826|gb|ACLH01000094.1| GENE 37 28456 - 28845 183 129 aa, chain - ## HITS:1 COG:no KEGG:cauri_1918 NR:ns ## KEGG: cauri_1918 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 3 129 1 127 127 242 99.0 3e-63 MAVGKVADDIAAQWFRHDCVLLRGAGASPYGWQEGEPVPFKGFVRQATRRVVGPEGEQTV TDTMVYVPLGLVVERGDHVELPDPFETGPWEVTERAAFDGAGNQTPDHQKLTLTIPSESS GGGVVNPYG >gi|227860826|gb|ACLH01000094.1| GENE 38 28827 - 29243 405 138 aa, chain - ## HITS:1 COG:no KEGG:cauri_1919 NR:ns ## KEGG: cauri_1919 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 138 1 138 138 257 100.0 1e-67 MLVFAQPDDVVKWAGYEFDDDVKLEPLIRRASSMVQRAVRAARFEVTPAGMPEDPDVMDA LRGAVCEQVTVWVENDINPTVIEASSGGVTSSSIGDANVSYSTVEAASVKDQAANELCDA SLDILFNAGLIGGWPWVR >gi|227860826|gb|ACLH01000094.1| GENE 39 29316 - 30218 1209 300 aa, chain - ## HITS:1 COG:no KEGG:cauri_1920 NR:ns ## KEGG: cauri_1920 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 300 1 300 300 560 100.0 1e-158 MSVESFKPILWAAALDAPFQDALVYSQTGVANARFQPVLQNSGKSVKINRLGAVKTRTYT QGESITYDTLSTESTELVMDQQEYYAFLIEDIDRAQAAGDFQNESTRQHAYAMAAKVDAH TAGVLKDGAKTKLGNKAVFDGADFYRPAEGQMTAWDVLREFSKQLNKHSAPSLDRWVVVG PNMAAALLADRRFTEADKAGTDTILRNGQIGAIKTLGFTVYTSNQAPVTAGRETIIGGAP NALDFASQLQTAEAFRHQDHFADAFRGLQVWGSGLAYPESVVTLEADVKPGTLGSAPAAA >gi|227860826|gb|ACLH01000094.1| GENE 40 30227 - 30973 896 248 aa, chain - ## HITS:1 COG:no KEGG:cauri_1921 NR:ns ## KEGG: cauri_1921 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 248 1 248 248 342 100.0 1e-92 MPENTTPENTSQAQETPAGQEPNTQAETNQPQQETNQPAGGIDDLPEWAQKEIRSLRNEA ANYRTRSKDAEAAKADELKAAQEKAEQERNQLIQDIGKKLGLVEDETNDPQKLIEAAVER EQAAAKERDQMRDTLNQYRRNDAMRSAVEKVDGTVDTTLLNALLNSDNAYTQLDVDADDF ESQVETIVTQKLESHPSLIQAIHKASGVDTSNTNRGNRAITMADLQQMTSKEIYEAQKAG KLDHLYTN >gi|227860826|gb|ACLH01000094.1| GENE 41 31078 - 31617 325 179 aa, chain + ## HITS:1 COG:no KEGG:cauri_1922 NR:ns ## KEGG: cauri_1922 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 179 24 202 202 337 100.0 9e-92 MKKAISLTIAALLLTGCGATEENGQQDSPQAQDIPEFQTVTGAGADVSSQLPSDSAWGCD SHVVNTSNGPETLKNFELEDGEATFYFAPKSSSGFNSYSYRLEFENGIMVMEDDASGDFH SFVQVYPSTEEETTLVDLGSNYLTAYFEVPVEHSDKLGALNSASAAINGELAGECEPSK >gi|227860826|gb|ACLH01000094.1| GENE 42 31941 - 32399 603 152 aa, chain + ## HITS:1 COG:no KEGG:cauri_1923 NR:ns ## KEGG: cauri_1923 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 152 1 152 152 255 100.0 3e-67 MARQMRTTEKHHTTEDYQVVTQTGFINDERVYQIAVINRNTGREEHRDVDSVENAIRLCN NSQDYLDKQRAELATKREVEAKGEEERAEDAATKAIGPLATDRQVDYIMALLAQHGGQNT TWFSAGPTTLEEVANMTRRDASTYISALKGDN >gi|227860826|gb|ACLH01000094.1| GENE 43 32415 - 32861 570 148 aa, chain + ## HITS:1 COG:no KEGG:cauri_1924 NR:ns ## KEGG: cauri_1924 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 148 1 148 148 269 100.0 3e-71 MQIISPDTLNRIGEKIILIGMATKTVSAVRTTGNRVALESARKGLAASEDDYEKVMGELS PDQLAWVETLFAKPLEMARAGRDGYNEAVYMAQIKWADDQIRELETITAELKDARSEWVQ VAMSYDVSAYQVAKMCGRTPSTVQRWVK >gi|227860826|gb|ACLH01000094.1| GENE 44 33028 - 34161 736 377 aa, chain - ## HITS:1 COG:no KEGG:cauri_1925 NR:ns ## KEGG: cauri_1925 # Name: not_defined # Def: putative phage minor capsid protein # Organism: C.aurimucosum # Pathway: not_defined # 1 377 1 377 377 706 100.0 0 MVFDPARTEGLNDDVVALYRRAEMYLIEVIRRALIRTGESPTWAEAQLLAIRQERGNIEG MADALHKRLGTTWRSTIDAAYLRGQIEAEKELAALPEHLRPTPAAPVFESSAAVYALVSE AITTMEPVHRNLVRRVDDIWRRIGVEATGYSVTGVMTTQQAAQRAFTRMAREGLPFYVDK AGRKWGLDTYAEMAVRTMTNKALRAGHTNTMIEHGIDLVVVSSHKNPAPQCAPYERKVLS LTGKFALGTHRIGDNIVNVKATMRDAESSGLHHPNCRHTHSAYIPGYTRISDAPYDGDDT GYKATQKQRYYERQIRASKRMEQAAIDETDVRAARQRTRAYQAKLRDHVAEHDLPRRRHR EQVRQPASGAVGLSFDD >gi|227860826|gb|ACLH01000094.1| GENE 45 34161 - 35699 1265 512 aa, chain - ## HITS:1 COG:no KEGG:cauri_1926 NR:ns ## KEGG: cauri_1926 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 512 1 512 512 1024 100.0 0 MSMPAANTPWPPEKWAPVTRMVGDASLWWEGDTKQLDSHYGGMNMVYRPSQFAGGVVGAV SRFFWGQPTPKGQSNRKMHLPIAADIAATSASLLFDTPPTFTVDDEQAQANLDDMLNDDR FPADLLVMAESCAALGGVYGRIMWDTDVSDDPWIDFVDADSAYPEFSYGKLTAITFHEEL PKQDEKHVWRLLSRYTKGRIEYALYKGREQNLGEQHPLNDHPSTAPLADIVDSQGGVDSH TMGIAATYIPNARPVVGFRNDGQLRNIGRPDISPDLFPLFDMLDEVWTDLKREMRLGKQR AVVPEYWLEQQGFGKGQVFDLDREFYDAVASTPTEGQGVQFYSPELRFEYYLNLADKIVL EILRRANYSPSTFGLAETTSTGQKTAREIESEYQASIQTWKAKSRYMRAGLSELSNALLE VHAWLHNITPPKARVKVDMTAPVQETMLDKASTIQALDAARAISTQQKIDMLHTEWDEED KLAEVDRIIAEQAGTFDPLGNIRPDEDPLGED >gi|227860826|gb|ACLH01000094.1| GENE 46 35709 - 36974 877 421 aa, chain - ## HITS:1 COG:no KEGG:cauri_1927 NR:ns ## KEGG: cauri_1927 # Name: not_defined # Def: phage terminase large subunit # Organism: C.aurimucosum # Pathway: not_defined # 8 421 1 414 414 861 100.0 0 MIDTAEVMGFSQKQKDAFAGSTGRVNIWDGSVRSGKTYTWTLLMLALVAAYKGTAAIVIT GKNRDSIYRNVFEPIETLAIFIPVKKYVVYRQGAAKATIFGRHVHIIGANDAGAESKIRG MTIGLAFADEITLLHPAFFKQLLSRLSKSYSKLFCTTNPDSQNHWLRKDYLVRVPGCMHY DTKTQPEDQLADWTYWHFTMDDNPSLTEGYKSNLRKEYTGMWYLRFIQGLWVAAEGAIYQ MWDEAKHVVHPEDMPIMRQIIALGIDYGTTHPTTGILLGIGDDNRLYAVDEWAPGRLTNN ALTADLKEWLTRHDYPTWIYYDPAAASFGLQLHEDGIRRIDKANNDVLDGIRTVASLLDN GNLLISSQCKNLIDEIPGYRWDEKAAERGIDKPIKEGDDFCDALRYSVYSSRYLWSRSIT A >gi|227860826|gb|ACLH01000094.1| GENE 47 36967 - 37404 610 145 aa, chain - ## HITS:1 COG:no KEGG:cauri_1928 NR:ns ## KEGG: cauri_1928 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 145 1 145 145 240 100.0 1e-62 MPSLHKDRTKAIIAERRRKAYEMRIQGASYHQIADTLKVSTDTVRNDVKAHMDYIPRENA IELRDMELDKLNQMELALQKKLRSGSPQAINAAVRIMQHRAQLMGLDSIENNDGLDAAKE AMTQIISALQNGPTAKPVEDDQQGD >gi|227860826|gb|ACLH01000094.1| GENE 48 37598 - 38113 634 171 aa, chain - ## HITS:1 COG:no KEGG:cauri_1929 NR:ns ## KEGG: cauri_1929 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 171 1 171 171 289 100.0 3e-77 MTLVNIAELRFYPGNARRGDIDLIAESLEKLGQYKPIVVNADGTILAGNHTVMAAQRLGW ETIDVHRVDVDDDTAKRIVIVDNKANDQSTYDVEDLVNLLTELPTLEATGFTRDEVDQLL ESLDDIDADIPERPAEPTPEGFNLLVECENAEEQARIKARLLAEGVTVGEV >gi|227860826|gb|ACLH01000094.1| GENE 49 38155 - 38436 189 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184826|ref|ZP_06044247.1| ## NR: gi|262184826|ref|ZP_06044247.1| hypothetical protein CaurA7_12588 [Corynebacterium aurimucosum ATCC 700975] # 28 93 1 66 66 124 100.0 2e-27 MSTRVATVAVSSGNRRCVKRHLKRENYMKIRVHGVERGRVNVYSGKSLSWKVSSGFLYIF DGEKEIGLHNQGMWASVEFDDESDDGSGVVGIL >gi|227860826|gb|ACLH01000094.1| GENE 50 38500 - 38664 95 54 aa, chain - ## HITS:1 COG:no KEGG:cauri_1930 NR:ns ## KEGG: cauri_1930 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 54 3 56 56 96 100.0 3e-19 MNHIDPEHQAEVDRLWASMPEEWRNLPDDEVTACGMPLGLVHPDIYDENNKPRE >gi|227860826|gb|ACLH01000094.1| GENE 51 38716 - 38829 130 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIIATTILAVSIVVIVAYPTIEDYFYTGQHRATPHES >gi|227860826|gb|ACLH01000094.1| GENE 52 39668 - 39847 109 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184829|ref|ZP_06044250.1| ## NR: gi|262184829|ref|ZP_06044250.1| hypothetical protein CaurA7_12603 [Corynebacterium aurimucosum ATCC 700975] # 1 59 1 59 59 96 100.0 5e-19 MPELYVSETWRGRWVVSPKQWVEHENDPTVVANFGDEEHARQWLEKQQKWLKKLRGTTL >gi|227860826|gb|ACLH01000094.1| GENE 53 40198 - 40542 414 114 aa, chain - ## HITS:1 COG:no KEGG:cauri_1933 NR:ns ## KEGG: cauri_1933 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 114 1 114 114 207 100.0 8e-53 MLTAIRIIWADFNLLIKLSIVGLFLLALVDCVEAALHPSWESLGDALDTVFFAVAITTIN GMLTVSKALFANNRVLRPLAHMGYQVTTSLQETGSINVHTAGDNYIIETIGEES >gi|227860826|gb|ACLH01000094.1| GENE 54 40536 - 41288 174 250 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRVCSIDGCESPHEAKGFCQRHYQRNYRTGSPIKKPRRANPLRDRTCAYCGSSYQSRSN HTKFCSTKCLDRNNYLRHREQKLTSAREYRKNNQEKIKASRKEKYQANRDEMRIRNRENY LLNREERVKAAIKYQAEHPEIVALTRSRRRAAVNFRISTKDHRKLLHLYRGCCAYCSVKL GKWGRKEGNSLQWDHVVPLARGGANGVGNLVPSCRNCNLSKNSSTVMEWKIRKARWYIDR EITRLGGGEC >gi|227860826|gb|ACLH01000094.1| GENE 55 41281 - 41499 91 72 aa, chain - ## HITS:1 COG:no KEGG:cauri_1934 NR:ns ## KEGG: cauri_1934 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 72 1 72 72 136 100.0 3e-31 MDAINPTHYQGFSNGAQPVDIAEHLSGNGAQALKYIARSTRIDGGNKGEVLQDLQKAKYF IEREIKRVSKDV >gi|227860826|gb|ACLH01000094.1| GENE 56 41502 - 42488 1067 328 aa, chain - ## HITS:1 COG:Cgl2473 KEGG:ns NR:ns ## COG: Cgl2473 COG0208 # Protein_GI_number: 19553723 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Corynebacterium glutamicum # 8 326 17 332 334 421 65.0 1e-117 MNLATPNHATPQDTIDPINWNEITDQVDKDVWDRLTSNFWLPEKVPVSNDIPTWKIMDEA EQWATMQVFTGLTMLDTMQGTVGALSILPDAATPHEEAVYTNIAFMESVHAKSYSNIFMT LADTPTINHAFNWGRQSERLQYKAHRVLDFYKRGNSPMRKAASTLLESFLFYSGFYLPLR MAAHSKLTNTADIIRLIIRDEAVHGYYIGYKYQQQVKHLDQAQQAELQSKVIDLLLDLMD NEEHYTRDLYDPLGWTEDVLAFLRYNANKALNNLGYDGIYPQDMCRFNPGVMTSLNPGAD ENHDFFSGSGSSYVIGTAEDTTDEDWAW >gi|227860826|gb|ACLH01000094.1| GENE 57 42500 - 43060 541 186 aa, chain - ## HITS:1 COG:CAC1425 KEGG:ns NR:ns ## COG: CAC1425 COG0756 # Protein_GI_number: 15894704 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Clostridium acetobutylicum # 45 186 4 144 145 107 42.0 1e-23 MHALEAMGLAVIILLALGLATALVIIVSKQHQDAKHNNPSSNRPLRIEVEGEAAYRPARA HTDDAGWDVRAAEDVHLKPGERALVSTGIKLGIPTGYCVLVLPRSGNAHKLGVTVNNAPG LIDAGYQGTLYVNLINHGDKAIRLNQGARIAQLLIQPVTSTCFNPVKNLTGTTQRGTKGH GSTGTK >gi|227860826|gb|ACLH01000094.1| GENE 58 43575 - 43946 324 123 aa, chain - ## HITS:1 COG:no KEGG:cauri_1937 NR:ns ## KEGG: cauri_1937 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 123 1 123 123 233 100.0 3e-60 MQQMMFTIPLTFTKPPLNMNQRLHWAKKAKITKAIRTEAFIRCRAARIPRAKHLTVQLHY QPRDNRRRDADNLVPTLKALCDGIVDAGVVPDDTPDYMIKMMPTIHPAVKGEPGRMWLTV DVA >gi|227860826|gb|ACLH01000094.1| GENE 59 44167 - 44436 203 89 aa, chain - ## HITS:1 COG:no KEGG:cauri_1938 NR:ns ## KEGG: cauri_1938 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 89 1 89 89 166 100.0 3e-40 MTILCTRTTTIMVPYKPRAGEVQRVKVDGTVESCTQARRDRPEPEHLQFEEPEPGLFRRC RQAYQHDNWGEPTHPLPMWVVFELWYEES >gi|227860826|gb|ACLH01000094.1| GENE 60 44433 - 44549 110 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNTLINLLSAAAYTPDGGIADPNHPIYILLWVLKALS >gi|227860826|gb|ACLH01000094.1| GENE 61 44534 - 45319 871 261 aa, chain - ## HITS:1 COG:HP0050 KEGG:ns NR:ns ## COG: HP0050 COG0863 # Protein_GI_number: 15644681 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Helicobacter pylori 26695 # 56 239 50 229 232 71 28.0 1e-12 MELINDHFQNFKRYNFPKAQLLVADIPYSLGTNAYGSSPAWYIGGDNKNGESELAGKQFF DTDKDFRVPEFMHFASKMLRPEPKAKGQAPCMIVFCSFEQQIPLIEEAKRYGFKNYINLV FRKPTSPQVLKANMRVVGNAEYALILYRDKLPKFNNHGHMIMNVQDWAKDGKHIPKVHPT QKPVALIERLIELFTDPGDVVIDPCAGSGSTLVAAENLGRRGYGFEIKKDFCRAFERQMR PAVTPSLNLWESSMEEECLTL >gi|227860826|gb|ACLH01000094.1| GENE 62 45322 - 45597 160 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184839|ref|ZP_06044260.1| ## NR: gi|262184839|ref|ZP_06044260.1| hypothetical protein CaurA7_12653 [Corynebacterium aurimucosum ATCC 700975] # 1 91 12 102 102 178 100.0 1e-43 MLNMNRWWEKAQCAGQPLNNYVLTGQRDKQATARQLCQHCPVKPQCAYDALQHEDSGVVR AGVWIPEDTAAMRYERETVYSQLYDAVAEGA >gi|227860826|gb|ACLH01000094.1| GENE 63 45627 - 45806 318 59 aa, chain - ## HITS:1 COG:no KEGG:cauri_1940 NR:ns ## KEGG: cauri_1940 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 59 1 59 59 102 100.0 8e-21 MKLHGRTVMRETADLDAQQLRFILCYLMPYIEQGRSYEEAQEILMTAIENEKRMAGDAA >gi|227860826|gb|ACLH01000094.1| GENE 64 45891 - 46118 328 75 aa, chain - ## HITS:1 COG:no KEGG:cauri_1941 NR:ns ## KEGG: cauri_1941 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 75 14 88 88 141 100.0 7e-33 MNYEIHPSYKVTNEGTVPADDARTITADGKVAGTVIYNDWNNTAVITRFVNGDAEITYTP CESKDQLDEVIRNVF Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:15:48 2011 Seq name: gi|227860825|gb|ACLH01000095.1| Corynebacterium aurimucosum ATCC 700975 contig00176, whole genome shotgun sequence Length of sequence - 15858 bp Number of predicted genes - 25, with homology - 23 Number of transcription units - 9, operones - 5 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 360 243 ## cauri_1947 hypothetical protein 2 1 Op 2 . - CDS 410 - 700 400 ## cauri_1948 hypothetical protein 3 1 Op 3 . - CDS 793 - 1074 278 ## cauri_1949 hypothetical protein 4 1 Op 4 . - CDS 1084 - 1308 300 ## cauri_1950 hypothetical protein 5 1 Op 5 . - CDS 1308 - 1775 436 ## cauri_1951 single-stranded DNA-binding protein 6 1 Op 6 . - CDS 1775 - 2017 292 ## cauri_1952 hypothetical protein 7 1 Op 7 . - CDS 2018 - 2713 613 ## COG1351 Predicted alternative thymidylate synthase 8 1 Op 8 . - CDS 2728 - 2823 138 ## 9 1 Op 9 . - CDS 2833 - 3027 304 ## cauri_1955 hypothetical protein - Prom 3079 - 3138 5.3 - Term 3076 - 3116 1.0 10 2 Op 1 . - CDS 3256 - 3729 364 ## cauri_1956 hypothetical protein 11 2 Op 2 . - CDS 3729 - 4169 489 ## cauri_1957 hypothetical protein 12 2 Op 3 . - CDS 4163 - 4411 103 ## cauri_1958 hypothetical protein 13 3 Tu 1 . - CDS 4987 - 5223 286 ## cauri_1959 hypothetical protein 14 4 Op 1 . - CDS 5352 - 5675 230 ## cauri_1960 hypothetical protein 15 4 Op 2 . - CDS 5685 - 6515 395 ## cauri_1961 hypothetical protein 16 4 Op 3 3/0.000 - CDS 6606 - 7424 959 ## COG3723 Recombinational DNA repair protein (RecE pathway) 17 4 Op 4 . - CDS 7427 - 8425 759 ## COG5377 Phage-related protein, predicted endonuclease 18 4 Op 5 . - CDS 8516 - 8740 245 ## cauri_1964 hypothetical protein - Prom 8769 - 8828 3.9 + Prom 8683 - 8742 2.5 19 5 Op 1 . + CDS 8915 - 9325 319 ## cauri_1965 hypothetical protein 20 5 Op 2 . + CDS 9291 - 9524 168 ## - Term 9470 - 9500 -0.9 21 6 Tu 1 . - CDS 9521 - 10705 690 ## COG0582 Integrase - Prom 10841 - 10900 3.8 22 7 Tu 1 . + CDS 11068 - 11895 1079 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 23 8 Op 1 . - CDS 11892 - 12365 622 ## COG0698 Ribose 5-phosphate isomerase RpiB 24 8 Op 2 . - CDS 12403 - 13017 942 ## cauri_2031 hypothetical protein 25 9 Tu 1 . + CDS 13119 - 15659 3227 ## COG0308 Aminopeptidase N + Term 15672 - 15702 3.0 Predicted protein(s) >gi|227860825|gb|ACLH01000095.1| GENE 1 3 - 360 243 119 aa, chain - ## HITS:1 COG:no KEGG:cauri_1947 NR:ns ## KEGG: cauri_1947 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 119 1 119 214 248 100.0 5e-65 MTNPFACIANGTDRHFTHRGINCMTQLGPFSINGYIELPENHPWLDYPDTLEVHPDIEVH GGITYEADLVIGFDTSHFGDGHHPGAERACLTGDSLNILGHAPHIWTWEEVEAETRKLA >gi|227860825|gb|ACLH01000095.1| GENE 2 410 - 700 400 96 aa, chain - ## HITS:1 COG:no KEGG:cauri_1948 NR:ns ## KEGG: cauri_1948 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 96 1 96 96 167 100.0 1e-40 MSLPYPYYTQHQDDYTEVEAILTIIHEEGPDTTHPVIVQLDPNDADDDLVSAVVDDRYWA NAPEALEAALKTKVDFEIAYWEDVETSWTGVCPFAA >gi|227860825|gb|ACLH01000095.1| GENE 3 793 - 1074 278 93 aa, chain - ## HITS:1 COG:no KEGG:cauri_1949 NR:ns ## KEGG: cauri_1949 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 93 1 93 93 120 100.0 2e-26 MASLSNVESIVNSIAKGISTSVKTKFTNTDSGYASANGSFANGTRFNVIDIDETKTTVCN LAKNNDEYVELSMRQSRTNSYIASNAVKAYAAI >gi|227860825|gb|ACLH01000095.1| GENE 4 1084 - 1308 300 74 aa, chain - ## HITS:1 COG:no KEGG:cauri_1950 NR:ns ## KEGG: cauri_1950 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 74 1 74 74 138 100.0 8e-32 MSNYKYDLFKKNLINRQDTDPNAGWLPFPKQRELKAGTLSMYRTRINKGVMFGNGFKAQM RNGHLYAKYVGTDN >gi|227860825|gb|ACLH01000095.1| GENE 5 1308 - 1775 436 155 aa, chain - ## HITS:1 COG:no KEGG:cauri_1951 NR:ns ## KEGG: cauri_1951 # Name: ssb4 # Def: single-stranded DNA-binding protein # Organism: C.aurimucosum # Pathway: not_defined # 1 155 1 155 155 267 100.0 8e-71 MAFDTITINRARVTDKGVEMRTSKNGNEYASLTVMWSSSRKDKAGGTEYGPTKFIKVTVT GFEAKDVFANIRPGDRVNVTGRIQHFEWQSDKGPQDDWSILGTVSLPVPYADNQQQGSAW PEPNTGNAWSSQPTAQQAQQNVQQGLGAQEGNPPF >gi|227860825|gb|ACLH01000095.1| GENE 6 1775 - 2017 292 80 aa, chain - ## HITS:1 COG:no KEGG:cauri_1952 NR:ns ## KEGG: cauri_1952 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 80 1 80 80 127 100.0 2e-28 MNITPLNNEKYANLTAEAWGAWLLASAHCDTHNTRVMNSSQFLEITRMTSLETYNQLEDA GLIEKTETGQTQINHLEETN >gi|227860825|gb|ACLH01000095.1| GENE 7 2018 - 2713 613 231 aa, chain - ## HITS:1 COG:Cgl1926 KEGG:ns NR:ns ## COG: Cgl1926 COG1351 # Protein_GI_number: 19553176 # Func_class: F Nucleotide transport and metabolism # Function: Predicted alternative thymidylate synthase # Organism: Corynebacterium glutamicum # 3 227 8 227 250 135 37.0 8e-32 MPNVQLLAHTKIDEKAVGEWMGIQDASTDAETLLTMAGRNCYRSFHRPNANTYDDADYLR RTLFTQGHWSIAEHATATLYFTGVSRAFLAELTRHRHLSFSVESQRFIDADNINIVLPPA IRASADPSVRASTDPYVLRNFTNAADEAITAYMIARDDLEGLPKKQRNEAARGLLPNCVE TRMVVTGNLRAWREVIDRRTQPDADAEMQQVMRLAREALHAVSPIIFPKEK >gi|227860825|gb|ACLH01000095.1| GENE 8 2728 - 2823 138 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGIALSITLIAIFTAVNSLAREHQRLNPENH >gi|227860825|gb|ACLH01000095.1| GENE 9 2833 - 3027 304 64 aa, chain - ## HITS:1 COG:no KEGG:cauri_1955 NR:ns ## KEGG: cauri_1955 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 64 1 64 64 110 100.0 2e-23 MTTYTTRNEAIQREIIEPLGEYANEHDIDAIADELIVCDATGPNAVYSVGEDADFWAVVA ANTI >gi|227860825|gb|ACLH01000095.1| GENE 10 3256 - 3729 364 157 aa, chain - ## HITS:1 COG:no KEGG:cauri_1956 NR:ns ## KEGG: cauri_1956 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 157 1 157 157 297 100.0 7e-80 MAGRQLRTARNTVNLHPNIWDETRFRNLPATAQWLYLALHTHQDLNQAGVIDWHPARLAG MSSDLISEDIEIAGSQLEEAGHLTIDYGTQEAYINGYNAKNRWLKSPTVGIAVGTAAQKT HSRKIRQVLKEELSYLTQQNPNNSALQTQPILDLLTE >gi|227860825|gb|ACLH01000095.1| GENE 11 3729 - 4169 489 146 aa, chain - ## HITS:1 COG:no KEGG:cauri_1957 NR:ns ## KEGG: cauri_1957 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 146 1 146 146 260 100.0 2e-68 MVSPRIAAEILNLGKKLAPDRFPKPDPTITQAWATALNREYPPRLWAEAVYLWATHRVAD KMCTPRDMLQAAHDTVNRWETNPTDKQELEEFRTQRLHAKYKQMLGDRYTPDAVPGAPPQ PHEITTEGPDFQALKTRLAQTRKAIH >gi|227860825|gb|ACLH01000095.1| GENE 12 4163 - 4411 103 82 aa, chain - ## HITS:1 COG:no KEGG:cauri_1958 NR:ns ## KEGG: cauri_1958 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 82 193 274 274 147 100.0 1e-34 MKTECPTINLEFEHRKFTDYWNSQPDSKARKKDWNATWRNWIRNARPQHQPRPHTPTSTA QDWLGTTQPPIIDADPIKELTW >gi|227860825|gb|ACLH01000095.1| GENE 13 4987 - 5223 286 78 aa, chain - ## HITS:1 COG:no KEGG:cauri_1959 NR:ns ## KEGG: cauri_1959 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 78 1 78 78 155 100.0 6e-37 MAETQTNPNANVVEEQRIINEALTVLIESHRNDAGEGYPMDFGVNFLCQYTILNHHEPVV RKAWGEFYEAYSLGGDES >gi|227860825|gb|ACLH01000095.1| GENE 14 5352 - 5675 230 107 aa, chain - ## HITS:1 COG:no KEGG:cauri_1960 NR:ns ## KEGG: cauri_1960 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 107 1 107 107 207 100.0 9e-53 MQLMIDIDPRDAAYMAEIAIHRGWNVAAQKAMAQLASTGEPFTAHDFRELLGDAKPHHPN TIGSFFRHARADGLIKPTGRFVESQTPSRHAAAVREWVGTNPRITNL >gi|227860825|gb|ACLH01000095.1| GENE 15 5685 - 6515 395 276 aa, chain - ## HITS:1 COG:no KEGG:cauri_1961 NR:ns ## KEGG: cauri_1961 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 56 276 1 221 221 408 100.0 1e-112 MSKAPSCNRPNCQNKTYRKDGLCAKHAYQKGKLHPKHTVEEAQQIIQHLTDNGWSMRAIA KASGLNYVCLSHITRGANKATHHATIRSLKKLPTTPPSHIGYTPAWPYERRLQSLQAAGY SAAKLAEISGLSRALICKITLNRADWVSPETAKKVTAMWENLATKPVIGPPTKTATRRLW ETPMMWDDIDDPNEQHPEPRTLIQLTKRELGFAESILDYYENKPWPLKRQRRTFRRLVES GHTTSPTLRLIYREYTRVMTERSREARKRKTIGQAA >gi|227860825|gb|ACLH01000095.1| GENE 16 6606 - 7424 959 272 aa, chain - ## HITS:1 COG:ECs1933 KEGG:ns NR:ns ## COG: ECs1933 COG3723 # Protein_GI_number: 15831187 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli O157:H7 # 7 251 13 256 269 180 39.0 2e-45 MGNNLEQRMAANNAPAKQNRPVTLADQIRSMESQFQLAMPKGMEAQQLVRDALTCLRQTP KLAECTPQSVLGGLMTCSQLGLRPGVLGHAYLLPFWDRKQGGMVAQLVVGYRGLVELAHR SGQIQSLIARTVYANDHFDVDYGLDDKLVHKPCMNGPKGNPIAYYAVAKFTTGGHSFIVM SKDEMLAYRDEFAKAKNKQGEVFGPWADNFDAMAHKTCVRQLAKWMPSSTDLDRGIAADE TVRVDLSESALDYPQHVDGEVVDSKPAEGEAA >gi|227860825|gb|ACLH01000095.1| GENE 17 7427 - 8425 759 332 aa, chain - ## HITS:1 COG:BH3544 KEGG:ns NR:ns ## COG: BH3544 COG5377 # Protein_GI_number: 15616106 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus halodurans # 8 294 4 298 320 91 27.0 2e-18 MNNTTYVPLPATNNRAEWLAQRNEGIGSSDASAIAGLSTFESPYSLWEIKTGRAPIDPPV DKTTERLREWGNRLEPVILDATAEELGVGIVKPEVGYKSTKHDWMRCNLDGWTEDGRIFE AKTVHLSQRHKWDGQIADHAEIQVTHSAMVTGADRAVVAALIAGSDLRVYEYEINPRIQE ILFDMEQKFWRCVETDTPPGVDGHARTIEALTSEWAHTPQPREVSEDEVQDIWDAWMDAD TRKKQAEHDLNQAKAQLAQLMDGHDSLTSGDRVWARTRRGRLNLKRLQADQPELVTQYTR PRPVFDMDKFKAEKPGVYTEYQYTSINPVKEN >gi|227860825|gb|ACLH01000095.1| GENE 18 8516 - 8740 245 74 aa, chain - ## HITS:1 COG:no KEGG:cauri_1964 NR:ns ## KEGG: cauri_1964 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 74 19 92 92 143 100.0 2e-33 MPEKRYMSVTSMAQMYDLSPNFIRGHINAGNLTAVNISTNAVKPAWRISIEDADDFMHFL AQQAEMQERKLLTA >gi|227860825|gb|ACLH01000095.1| GENE 19 8915 - 9325 319 136 aa, chain + ## HITS:1 COG:no KEGG:cauri_1965 NR:ns ## KEGG: cauri_1965 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 136 10 145 145 249 100.0 2e-65 MINSIFNLSELVRLERQRAGMNQAELAEAMGRDRSWVVQLERGRRYNGNRFETEPEMVLK LAAVLNIDPVEALVASGIDKSEWPDLSHIRSKSANVRTVDITTLSNSQAKLVEQLVKEFK DGNKQNESGKQPGRHL >gi|227860825|gb|ACLH01000095.1| GENE 20 9291 - 9524 168 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVVNSLVDTYDLLVIPQAGITQPAPHLTPTQAQHATKAWRDYGTETNLSFEHTWTVAVA HIIDGDLKITTTMLIPA >gi|227860825|gb|ACLH01000095.1| GENE 21 9521 - 10705 690 394 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 23 394 15 365 368 72 20.0 1e-12 MPQVRNIGDLNFDKKKEVYYRIIDLGHRPNGNRWRVRVTAKTKQRLAAKVKAKLKELEDG TYQAGTTPTLNEWWAYWCDNIAYHRVRPRVLDNYRSYGRNHIPHIGRNRIDQLTPEHVRH LHKKMRQGGASDRTIQAVHATLSKCLKDAVHEGKITVNPCDRMDRPKANSVPREAYSKAE AKAILTTMAGDSPMMRARWALALTMAVRQGECLGLEWDRVDLDRGLVDLSWQVQRIPWVH GEGCECGSKVTAARCPKRRPDVAPGYEHRPCHKGLWFVRPKTARSSRVLPMSNVFHAAMV ELHQGQESGLVFHDEGKPILNKVDDAAWYELCERAGVRRMVLHTARHTVISHLLDAGVDA ELIRQFAGHSTLLSTRHYLHSSEDAMRDALEKLD >gi|227860825|gb|ACLH01000095.1| GENE 22 11068 - 11895 1079 275 aa, chain + ## HITS:1 COG:Cgl2308 KEGG:ns NR:ns ## COG: Cgl2308 COG0656 # Protein_GI_number: 19553558 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Corynebacterium glutamicum # 3 275 37 305 305 342 61.0 5e-94 MTVPNIELNDGNTIPQLGYGVFKVDPDKTEELVLEALKVGYRHIDTAAIYGNEEGVGRAI AKSGIPREELFITTKLWNDRQTDAAAALDESLEKLGLDYVDLYLIHWPCPDNGHYVEAWK QLIELKKAGKAKSIGVSNFELEHLDQLETQTDETPVVNQVELHPYLQRWRELDAFRAHQV HIEAWGPLGQGKTDLFEQPEITEPAEKYGVSPAQVIIRWHLQNGVIVFPKSENPERIAQN FDVFGFELDESEMAAITDLDLGEEGRGGTHPKDMN >gi|227860825|gb|ACLH01000095.1| GENE 23 11892 - 12365 622 157 aa, chain - ## HITS:1 COG:Cgl2369 KEGG:ns NR:ns ## COG: Cgl2369 COG0698 # Protein_GI_number: 19553619 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Corynebacterium glutamicum # 1 155 1 155 157 270 90.0 1e-72 MRVYLGADHAGFETKNVIAEHLKKQGHDVIDCGAHEYDAEDDYPAFCIEAALRTVNDPGS LGIVLGGSGNGEQIAANKVKGARCALAWSPETARLAREHNNAQLIGIGGRMHSEEEALAI VDAFLDQEWSRAERHQRRIDILAEYERTNIPPELPEA >gi|227860825|gb|ACLH01000095.1| GENE 24 12403 - 13017 942 204 aa, chain - ## HITS:1 COG:no KEGG:cauri_2031 NR:ns ## KEGG: cauri_2031 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 204 1 204 204 407 100.0 1e-112 MAQQVTFWFDCSCPFAWLTSRWIKEVEKVRDIEVTFEPMSLSVLNKGRDLDPEYMKMMEA NWGPARVAAKIAVEAPEKVDAFYTAMGTRIHTEGQGGKKGYGAYDDIIKQALDDASLPST FASVANTEEMDEKLTEFHNRGISEVGDEVGTPVVKFGDTAFFGPVITRVPTGEEAGELFD ASVRLAQFPYFFELKRSRTESPQV >gi|227860825|gb|ACLH01000095.1| GENE 25 13119 - 15659 3227 846 aa, chain + ## HITS:1 COG:Cgl2372 KEGG:ns NR:ns ## COG: Cgl2372 COG0308 # Protein_GI_number: 19553622 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Corynebacterium glutamicum # 1 844 1 865 867 965 60.0 0 MTSINLTREEAQQRSGMLEVSHYDVALDLTGEEFFTSTTVVKFRVKKAGSTFIDLRGDEL LEVRLNGAPLPTSAYDPTYGIPLSGLQVAEYELKVVAKIRYSRTGEGLHRFVDPVDGEAY LYTQFETADAKRVFACFDQPDLKATYSLAFEVPEHWTVITNSPTTRSGNTVRATVDYPLS TYLVALCAGPYVGVTDTWTGTLTEHPEGSPAKSVEVPLGIYCRPSLLESLDAERLFTETK QGFDFYHRNFGFAYPFGKYDQIFVPEFNAGAMENAGCVTIRDEYVFTSQASHYNYERRAD TILHELAHMWFGDLVTMQWWDDLWLNESFATWSAAISQAEETEYDTAWVTFANVEKAWAY QQDQLPTTHPISTDASDIETVEQNFDGITYAKGASVLKQLQAYVGRENFFAGVRRHFQEH QWSNATFGDLLRHLEEASGRDLSFWAQQWLKTTGVNTLGVALATDESGTITQAYLTQRGD TLRTHRIAVGVYALQGEKVVRTERIEMDIDGASTEIPELVGRQLADIDFVLPNDDDLTYC LIELDAGSLQFLLENVDKFEDPMARTLCWSTAWEMTRAGSMRARDFVALVARGAAAETEL AVLERILTQAATAQSTYADPEWAKEDTQLARALLDGARSDSAERSIVFTQALAGVKLHDA SRTFFQDLLESSSDAGLRWKALTALIADGSLADVTGPEAAGAAMTAVAEELNRDNTATGY QASLKALAAVNTEDNKRAVWDEIVAGELGNRDLESKLAGLTFVGSDELLPSAEFFDVAEK IWSAQSNEIALTTVTGLFPRWDINQETLDRADEFLSRDLAGGLRRAVTEQRDRLARALRN RAVDRG Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:16:50 2011 Seq name: gi|227860824|gb|ACLH01000096.1| Corynebacterium aurimucosum ATCC 700975 contig00177, whole genome shotgun sequence Length of sequence - 30964 bp Number of predicted genes - 28, with homology - 28 Number of transcription units - 15, operones - 5 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 300 - 347 4.2 1 1 Op 1 . - CDS 409 - 1155 712 ## COG2188 Transcriptional regulators 2 1 Op 2 1/0.000 - CDS 1212 - 1886 820 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 3 1 Op 3 2/0.000 - CDS 1904 - 3091 1519 ## COG2128 Uncharacterized conserved protein 4 1 Op 4 13/0.000 - CDS 3121 - 4869 311 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 5 1 Op 5 49/0.000 - CDS 4871 - 5725 1003 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 6 1 Op 6 38/0.000 - CDS 5722 - 6732 1158 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 7 1 Op 7 . - CDS 6733 - 8433 1931 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 8457 - 8516 3.2 + Prom 8397 - 8456 5.1 8 2 Tu 1 . + CDS 8490 - 10370 2293 ## cauri_2044 hypothetical protein 9 3 Tu 1 . - CDS 10449 - 11609 1347 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 11613 - 11672 4.1 10 4 Op 1 . + CDS 11725 - 12726 1031 ## COG0668 Small-conductance mechanosensitive channel 11 4 Op 2 . + CDS 12729 - 13118 446 ## COG2346 Truncated hemoglobins 12 5 Tu 1 . - CDS 13115 - 14197 1193 ## COG0686 Alanine dehydrogenase 13 6 Op 1 . - CDS 14405 - 15061 387 ## cauri_2049 hypothetical protein 14 6 Op 2 . - CDS 15061 - 15519 489 ## COG0824 Predicted thioesterase 15 6 Op 3 . - CDS 15569 - 17239 2415 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 16 6 Op 4 . - CDS 17320 - 17964 558 ## cauri_2052 single-stranded DNA-binding protein 17 7 Tu 1 . - CDS 18187 - 20259 1945 ## COG3336 Predicted membrane protein 18 8 Tu 1 . + CDS 20336 - 20629 255 ## COG0583 Transcriptional regulator + TRNA 20677 - 20750 73.2 # Arg TCT 0 0 + Prom 20676 - 20735 76.2 19 9 Tu 1 . + CDS 20827 - 21459 425 ## cauri_2055 hypothetical protein 20 10 Tu 1 . - CDS 21477 - 21662 258 ## COG1983 Putative stress-responsive transcriptional regulator 21 11 Tu 1 . + CDS 21790 - 22602 1075 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Term 22605 - 22658 21.3 - Term 22595 - 22644 18.6 22 12 Tu 1 . - CDS 22653 - 24200 694 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 24244 - 24303 3.3 + Prom 24168 - 24227 2.4 23 13 Tu 1 . + CDS 24464 - 25096 724 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + Term 25225 - 25272 10.1 + TRNA 25145 - 25220 74.5 # His GTG 0 0 + Prom 25147 - 25206 80.0 24 14 Op 1 . + CDS 25410 - 26270 795 ## COG2375 Siderophore-interacting protein 25 14 Op 2 . + CDS 26298 - 26843 395 ## COG2094 3-methyladenine DNA glycosylase + Term 26850 - 26912 11.2 26 15 Op 1 39/0.000 - CDS 26905 - 27783 840 ## COG0074 Succinyl-CoA synthetase, alpha subunit 27 15 Op 2 . - CDS 27792 - 28976 1163 ## COG0045 Succinyl-CoA synthetase, beta subunit - Prom 28998 - 29057 4.2 - Term 29042 - 29101 7.4 28 15 Op 3 . - CDS 29204 - 30493 1111 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 30732 - 30791 75.4 + TRNA 30715 - 30787 84.6 # Lys CTT 0 0 Predicted protein(s) >gi|227860824|gb|ACLH01000096.1| GENE 1 409 - 1155 712 248 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 9 231 9 230 240 100 30.0 3e-21 MSTSQRRRPAYLVIADSLRSKIESGELKPGDRFPTERELVQEYKVARMTVRHALDIVQIE GLIDRKRGRTGGTFVRATPPTLSLTSGRSALDQLREHGLDVEVRVLSLVFIEAPGHVAST FGIEEGDSVWECRTVQVSAGSPIMASTLLIPQALAPSLAEEDIQKPLTELLTELDLAPVF KRDSLVAATARTEEQKALGVGRNQPVLRITRTIKAESGVVAAQLEETLRPDAVTVEVVIG EDPTPTLD >gi|227860824|gb|ACLH01000096.1| GENE 2 1212 - 1886 820 224 aa, chain - ## HITS:1 COG:Cgl2390 KEGG:ns NR:ns ## COG: Cgl2390 COG1028 # Protein_GI_number: 19553640 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 3 224 4 235 236 218 56.0 8e-57 MVKTAVVTGATGGMGVEIIKDLARDHRVYALGRRAGELPEAENIVPVEIDLLSLLDGAAL PAELASLERVDVLVHAAARADKRSVESARPEDWRAQMDLNVHVPAELTRLLLPALRAAEG LAVFINSGAGIHSYGDNVIYAATKHALYALADGLRLGELGIRVSTVAPGPTDTPMLQGLQ DYNPEHVIAPVEVAKAIRATVDAGPTTQLTEVRVRPRIELNQRK >gi|227860824|gb|ACLH01000096.1| GENE 3 1904 - 3091 1519 395 aa, chain - ## HITS:1 COG:Cgl2381_2 KEGG:ns NR:ns ## COG: Cgl2381_2 COG2128 # Protein_GI_number: 19553631 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 204 394 1 191 192 256 67.0 6e-68 MADIINLVAGVEGDVAQLRERRPEAKENAQASFAALLEPAEPGTFSYAERYAIATFVAGV YQAAPAVDFYSDLLAEESEELAAEITRAVERGITTGPYIDGGFTLFDGSPRLAAALDFAH LLAFHPKDASPAAIGHLQAAGWSDDDIVTLAQLISFLSFQLRVAHGLSVLAGTAQPAPVT EAPRPTQTPEWVPGEGTLVPDVAKPQGFVAHSLGWKPWVPPQPKEEFTDAQRDALIKPER IDMEYFRLLARDPAALKARTLTDLDIFYNTDGGLGRAERELAATVVSRLNGCEYCASVHQ QRAKEEGGDAAAVDRLLEEGVDADLGSAQWSAIRDAALVLTKSPFDFDASHVERLEAVGF DTLAIIDVINSSAFFNWANRLMLTLGEPDVPKRFR >gi|227860824|gb|ACLH01000096.1| GENE 4 3121 - 4869 311 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 325 568 1 242 245 124 30 7e-28 MFVTKNAAQPLLRVRDLNVSYSTAGGDVSAVQGVNLEVRPGQMTAIVGESGSGKTTSAMA AIGLLPSNATIGAGTITFDGRDITSLRRREWRELRGRRIGLIPQDPNNSLNPVQTIGASV EEGLRIHKVGTAAERKAKALELLERVGIDDPERRYHQYPHELSGGMKQRVLIAAAVALEP DLIIADEPTSALDVTVQKIILDLLDDMRAELGMGILFITHDLAVAGDRADRVVVMESGQL REEGLAATVLTNPCHDYTKRLLADAPSLTVADAGTSAPRSTAKPDPRTLTDAGASTATTG AAAKAGATAERASSVSHGAATGEPLVRVEGLTQRFGDFTAVDGISFTVAKGSTHAIVGES GSGKTTTGRSIAMFNTPTSGNITVGGRDIVGLRGKALREERNNIQLVYQNPYGSLDPKQT IGQTVAEPLRNLKGARASAAKEKAKEFLDLVALNPDYYDRRPRELSGGQRQRVAIARAMI VEPELVILDEAVSALDVTVQAQILRLLSRLQEELGLTYIFISHDLAVVNQISDTVSVLSK GQQVECGPTAEVFSNPQSPFTRKLIEAIPGSRYRAGDLNLGL >gi|227860824|gb|ACLH01000096.1| GENE 5 4871 - 5725 1003 284 aa, chain - ## HITS:1 COG:Cgl2383 KEGG:ns NR:ns ## COG: Cgl2383 COG1173 # Protein_GI_number: 19553633 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 16 284 27 294 294 327 69.0 1e-89 MSMTHTKPLRSTRAPRRHTANPWLAPGSLIAIVILAIAFLAAFFPSLFTSADPYAGTDVA LLPPGESGHLMGTDAVGRDLYARIVYGARQSLLGALIAVAVGLVVGTLIGLLAGSLRGAV DSVLMRVVDVLLSIPGILLSLSIIIVLGFGSVQAAVAVGATSVATFARLARSQVITVASS DYIEAAYGAGATHATVLFRHILPNSLTPVIALATLQFGTAILQLSILGFLGYGAPPPTPE WGLIIAEGRDFMATAWWLIILPGIALVAVVMSANRLSQNFPVEA >gi|227860824|gb|ACLH01000096.1| GENE 6 5722 - 6732 1158 336 aa, chain - ## HITS:1 COG:Cgl2384 KEGG:ns NR:ns ## COG: Cgl2384 COG0601 # Protein_GI_number: 19553634 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 1 308 1 308 313 328 62.0 1e-89 MTTRQILSRIGQALLVLLITYTVAFLLLSALPSDAVQSRFGDPALGLSQAEIEAIREEMG VDKPLVVQYFTSLGGFLTGHFGNSTQSGAPVATLLADALPHTLILAASAIGLALIVAVLV AFLATLPGLGAIGSFFRGLPSFMVSLPGFWIAILLIQFFSFQLGWVRVIEPGSVEGLILP TLTLSVPMAAPLIQVLIRSIDETQSRPFVQAVRSRGASESWIFWRTVLRNSLLPTLTMAG LLFGELVGGAVVTETVFGRTGLGYMVAQAVANRDTPVLLAVVLIAATSYIIINLVVDLLY PVLDPRLRASASERAARRSTDSATTSAATSERTVRS >gi|227860824|gb|ACLH01000096.1| GENE 7 6733 - 8433 1931 566 aa, chain - ## HITS:1 COG:Cgl2385 KEGG:ns NR:ns ## COG: Cgl2385 COG0747 # Protein_GI_number: 19553635 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 19 566 18 567 569 671 62.0 0 MRCVKSRDTAQTDYRLSESITVKTLRALAATLAAALALAGCSAADRPDGEDNVLTYLEPQ FFRTLYPPAAGFYPNGGVVNQLTDRLLYQDPETLELSPWIATEMPKVNADATEYTFTIRT DVTYSDGSPLTAENVVANFDLFGRGDKSRTLTSSEQIANYDRGEVVDEDTVKFYFTQPSP GFLQATSAYNAGLLSDSTLALDNEGFGPGNAVNVIGSGPFVVESEEIGTDLKLKTREDYD WAPPAVKHQGRADIDGVHYILAAEESVRTGAILSGQADIARQISAPQESLLKEQGVDIVS SGTNSMNNQFAFRFDHPLLQDKRVREAIIHGVDREEILRVLFSESYPLATSTVAKTGLAY KDQSAAYTFDPEESKRLLDEAGWEAGPDGIRVKDGQRLVLRTNTALPQPRSKEVMTMVQD QLGELGIGIRVNAGDQATQNADAKDVDKVQIYHSMVGRADYDVITSLYGINNRDAFLNQD AEGNPIDEHLQGLLDAVLDTPDKEGRIKATEEVQDYITEQAYVLPLFEEPVVYAVRPGIT GFSPESVARPWFYEVSIDAASNEEEK >gi|227860824|gb|ACLH01000096.1| GENE 8 8490 - 10370 2293 626 aa, chain + ## HITS:1 COG:no KEGG:cauri_2044 NR:ns ## KEGG: cauri_2044 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 626 1 626 626 1149 100.0 0 MPAIAIVGAGPRGISLVERLAAHLRATPLHSPLRLHIIDDAPLGAGRIWDTEQTRTLCMN TLAGAVTLFTEPGSTTTAPVLEGPILYEWIQLLRGERPSISPAKLELYDSHPPREGLAAS FAEELAQTRPESNPSRALYGAYLEWVFEVALAQLPESVDVVQHRARALSVEEHGEQDAIK LSDGTTVTADATVLAYGWQVPALSESERSLAEAADSGLHWVRPDNPVEQPVSEVPAGEKV LVRGLGMGFFDVMALLTIDRGGEFVEDPSTRSGLRYEPNGEEPHFIVSSGRGYPYIPKSE YHALPPKAALTRFRAAVAAIDPEAEFDFGTQLLPHILRDAYAEYYENQARVSPNALQRPL EDILATIDATAVDADDLADMADQLRVALDGVSTEPLDLAHWAHPLADFEGTEITEYIAEG LARDIVEAVAAADSPLKSALWAISAARKPSSIAGSEGRMTWESRTSTYKEFMAFGQMVGS GPPLFRTRQLLALVDAGLVTFLGQRPQLEISEKFSLRTAHGEASSTWLIDAWMHSPDVRR AGDPLAVSLNGRVRAFVDHGQATGSPETTWNRRAVNPGGTEDPRLHIVGIPTYSQWPDTT ISPMPGTDPLMLQETDRTAGSLLTSL >gi|227860824|gb|ACLH01000096.1| GENE 9 10449 - 11609 1347 386 aa, chain - ## HITS:1 COG:Cgl2392 KEGG:ns NR:ns ## COG: Cgl2392 COG0626 # Protein_GI_number: 19553642 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Corynebacterium glutamicum # 3 385 4 386 386 513 65.0 1e-145 MTDNRTLGFSSRSIHAGYQPDPYMGSINVPIYASTTYQQDGLAQLRGGYEYGRVANPTVH SLEKTLAALENAEYARCFATGMAAVDTLIRILVRPGDHVILGNDAYGGMYRLLHHDYGEW GIELSIVNTADTAAVEAALKENTKLIWLETPTNPATTITDIAAVAKVVKATGDAQIVVDN TFATPHLQNPLELGADHVLHSTTKYLGGHSDVLGGAVVTNSAEMDERLLYFQGNVGAVSS PFDAYLTARGIKTLEVRMDRHCSNAQAVAEFLESRPEVKQVLYPGLPSHPGHELAKKQMR GFGGMMSVRFHSEEHARQICLNTKLISLAESLGGVESLIEHPQNMTHISAEGSELVPPAD LVRISVGIESIDDLLADLEQALDALH >gi|227860824|gb|ACLH01000096.1| GENE 10 11725 - 12726 1031 333 aa, chain + ## HITS:1 COG:DR1995 KEGG:ns NR:ns ## COG: DR1995 COG0668 # Protein_GI_number: 15806993 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Deinococcus radiodurans # 97 316 126 346 426 150 38.0 3e-36 MTRSTTYLRASAVQSDGAVDAVTRWWQTENMQSWLIDKPIGIALILVVAIIGSWLLRRLI TKLADNSIKKGKLSSPLSPRKAHRTTDKVLEQTQEARRTSRIQTLAGVGRSAVAIFVWVW AALAILDKLGVNVAPLVASAGVVGVALGFGAQALVKDFLSGIFMLMEDQYGIGDTIDLGN GVFGDVESISLRITTVRDIDGALWYVRNGEILQVANHSDRYSVARVQVPIALSNDPTRAV DVITSAAEDAARDSEIKDFILATPTVNGMSGLEVDHMSYRVSVKTLPGKQWDVQRAMQAR ILTAMHSEGITTPYPRGMAIFDLEEPSLTRKED >gi|227860824|gb|ACLH01000096.1| GENE 11 12729 - 13118 446 129 aa, chain + ## HITS:1 COG:Cgl2394 KEGG:ns NR:ns ## COG: Cgl2394 COG2346 # Protein_GI_number: 19553644 # Func_class: R General function prediction only # Function: Truncated hemoglobins # Organism: Corynebacterium glutamicum # 7 129 8 127 131 140 57.0 5e-34 MQPTSVYEAVGGMETFEKLVGGFYAQVREDDLIGPMYPQQDWEGAQQRLTWFLVQYWGGP QLFSEQRGHPRLRMRHAPYPIDMAAHDRWLELMSNSLARIDEETIPPAYRAMIWDHMERV AAMLINRAP >gi|227860824|gb|ACLH01000096.1| GENE 12 13115 - 14197 1193 360 aa, chain - ## HITS:1 COG:ML1532 KEGG:ns NR:ns ## COG: ML1532 COG0686 # Protein_GI_number: 15827805 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Mycobacterium leprae # 1 360 1 361 371 357 53.0 2e-98 MRIGVPKEIMNNENRVALTPSAADTLIKDGHEVLVETMAGEGASFPDSEYQAAGATIVPT AAEAWAAEMVVKVKEPLESEYGYLREDLLLFTYLHLAADRPLTEALMKSGTTAVAYETVS DSRGTLPLLTPMSQVAGRLAVIEGTHHLLSTEGGRGLLVSGVPGTRPARVVVIGGGQVGA SAVAMAHGLRGEVTVLDLDPHVLQRFDEQYQGSVRTIVSDPSALEEELLEADLVIGAVLV PGAAAPKLVREDVVKRMKKGAVLVDVAIDQGGCFENSHKTSHDEPTFKVHDTIFYCVANM PGAVANTSARALGSATLPYMRALAADGFDGAVERFPGLADGLMTRGGELVSQPVKDAFGL >gi|227860824|gb|ACLH01000096.1| GENE 13 14405 - 15061 387 218 aa, chain - ## HITS:1 COG:no KEGG:cauri_2049 NR:ns ## KEGG: cauri_2049 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 218 1 218 218 416 100.0 1e-115 MESETLTLRSGGVGLRALLSRATGLDASAAVRLRQYDTNQAEVFVTTPFDVVVARRCEGT VGRDGAVVSAQALLDALHTAPDSLGHEGGVELDLGPARDPSWPGALPPEQGFREIDSLPV DVVRELADKGRQLARQFSGPMGPPKSLLNQTVLTVNDAETQVEIPMRMIFACTSLGLIPG FAASLEIPRHLRVAGKGRWVRLDAPYGSVYHSTRLSLF >gi|227860824|gb|ACLH01000096.1| GENE 14 15061 - 15519 489 152 aa, chain - ## HITS:1 COG:Cgl2397 KEGG:ns NR:ns ## COG: Cgl2397 COG0824 # Protein_GI_number: 19553647 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Corynebacterium glutamicum # 3 152 2 150 155 110 47.0 8e-25 MSAQNVVSEKTKDNVHALTVGVRWSDFDMYGHMMNANFIELAQEARLAFAMHHFYARGVN MVAFVRHIEADYVRPIKWDGRHGTVTVETTVVRLGTTSFTTRQTIKDARGQVACVIDCVQ VTIDPATQMPREVSEQERNIILEHAVVELEQQ >gi|227860824|gb|ACLH01000096.1| GENE 15 15569 - 17239 2415 556 aa, chain - ## HITS:1 COG:Cgl2400 KEGG:ns NR:ns ## COG: Cgl2400 COG0488 # Protein_GI_number: 19553650 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Corynebacterium glutamicum # 1 556 1 556 556 1001 90.0 0 MGEFIYTMKNVRKAIGDKVILDNVTMAFYPGAKIGVVGPNGAGKSSILKIMAGLDQPSNG EAFIDPGKTVGILLQEPPLNEEKTVRENVEEGLGEIFQKKQRFEEIAEEMATNYSDELME EMGKLQEELDAADAWEVDSKIEQAMEALRCPPSDDPVTNLSGGERRRVALAKLLLSEPDL LLLDEPTNHLDAESVQWLEKHLETYPGAVLAVTHDRYFLDHVAGWICEVDRGKLYPYEGN YSTYLEKKAERLEIAGAKDKKLQKRLKDELAWVRSGAKARQAKNKARLQRYEEMAAEAEQ YKKLDFEEIQIPTPPRLGNKVVEVKNLTKGFDGRVLIKDLSFTLPRNGIVGVIGPNGVGK STLFKTIVGLEQPDSGSVDVGETVKLSYVDQGRENIDPEATVWEVVSDGLDYIHVGQNEM PSRAYLSAFGFKGADQQKPSKVLSGGERNRLNLALTLKEGGNLILLDEPTNDLDVETLGS LENALEKFPGCAVVISHDRWFLDRTCTHILAWEGNVAEGQWFWFEGNFGDYEKNKVERLG EEAARPSRVTHRKLSR >gi|227860824|gb|ACLH01000096.1| GENE 16 17320 - 17964 558 214 aa, chain - ## HITS:1 COG:no KEGG:cauri_2052 NR:ns ## KEGG: cauri_2052 # Name: ssb3 # Def: single-stranded DNA-binding protein # Organism: C.aurimucosum # Pathway: DNA replication [PATH:car03030]; Mismatch repair [PATH:car03430]; Homologous recombination [PATH:car03440] # 1 214 1 214 214 396 100.0 1e-109 MSQYPISITGRLTHNPHLTKISDTMYKARIRIASSRSVPEKDEEGKTVWRELDLNFIDGE VWGQCAINVKKSLFKGMPVFVMGSIVTDRWKDQHGANRSRTFIKIAHVGLDLNRFCVTST KIGTSYGEEGSEALWLGENPPVLDVDYTAPPSHTQNTEDTQNTENTEGSENPTEETMPAA LRPGDTPQDTAADRQQAQSGAEPYLEPEPEEAMV >gi|227860824|gb|ACLH01000096.1| GENE 17 18187 - 20259 1945 690 aa, chain - ## HITS:1 COG:Cgl2402 KEGG:ns NR:ns ## COG: Cgl2402 COG3336 # Protein_GI_number: 19553652 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 33 684 37 697 717 664 52.0 0 MHTEKEKPSSQHLRGLAHSGSGAQSSRLLNLSFVVFAGLVGGIISLFFLADSLAALGIPD PGRMTTFGLPFFRAVAWMLMALAIGSFMSSAFLIYPAVPDKDNERLIEAGLTVDGHIAAR TGAWASVGAAVVSLIEVPLVMSDLTGTPLGQVLNPELMGMAVGQIATSQVWLLTAGIAAL VAIMGFVARTWAGQVATFFLSLLLTVPLGMEGHSASGGDHDYGTNSLLLHLFFIMLWVGG LMGLIAHGRRLGPDMGVAVRRYSTVALLSILGLAATGVVNALIRVELGDLFTTRYGLLVL SKAVLTVVLAAIGFVHRRVTIPQMKRAPRLFIRVSVVEVLIMAATVGVAISMGRTPPPPP RDPNLNAMQILVGYELFDAPTATNVWTMFRFDLMFGSLGLVLAGFYLYALWRLKQRGLTW SAVRTTWFLVGSLGMTLILSNGIGLYMPALYSMHMLVHMILSMAIPLCLVLGAPVTLVME AFEPGEPGKPTLHDAAVALTKSRTLRVLTHPAVNVLQFLAILYVLYLFPNFYEAAISEHA GHVIMNWVFLISGYIYYWEVIGPDPLPWRAPTGVRLLILFVSMPLHLFAGVYLMQMQVIL GLDFYESLNLPWNPNFVKDQRTGGGISWGFGQFPLVIVFGSLFRDWLREDRATARRYDAK ADVDGDADLERYNAMLKQMGEGDESSFRQH >gi|227860824|gb|ACLH01000096.1| GENE 18 20336 - 20629 255 97 aa, chain + ## HITS:1 COG:CAC2394 KEGG:ns NR:ns ## COG: CAC2394 COG0583 # Protein_GI_number: 15895660 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 89 1 89 286 65 37.0 2e-11 MDSRQLHHFRAVVDHGSFTQAAEALQLTQPSLSLTVRKLEKDLNVKLLSRGRGGVRTTEA GDYLYGVAISVDSLLTTATARLAEFASSTPAPKQQQR >gi|227860824|gb|ACLH01000096.1| GENE 19 20827 - 21459 425 210 aa, chain + ## HITS:1 COG:no KEGG:cauri_2055 NR:ns ## KEGG: cauri_2055 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 210 1 210 210 399 100.0 1e-110 MDITLATFDHAPESTLRGMRFVNAWVPAPSYAASRRAVLTGQYPQRGATTRITEIFKAAG FEVREDTEPASSQVFRLLEQPNPQLLDTLDGVVAVCSLQGDKAAMSLLWPGVAESGECVE LVSPLDLAPTLAAIAGLDVRPNAPLSFDGLNLVPVLRYGASGHAALFFDNGVRMQDAVLV DDSATPPSALPRLREEWETWKRFMALGPLQ >gi|227860824|gb|ACLH01000096.1| GENE 20 21477 - 21662 258 61 aa, chain - ## HITS:1 COG:MA4346 KEGG:ns NR:ns ## COG: MA4346 COG1983 # Protein_GI_number: 20093134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 4 61 113 170 183 67 48.0 8e-12 MNNQRLTRSTTDTMLGGVCGGIAQTYNLDPTLVRILFVVATLLGFSGILLYLILWVVIPV E >gi|227860824|gb|ACLH01000096.1| GENE 21 21790 - 22602 1075 270 aa, chain + ## HITS:1 COG:Cgl2420 KEGG:ns NR:ns ## COG: Cgl2420 COG0300 # Protein_GI_number: 19553670 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Corynebacterium glutamicum # 6 270 2 266 266 341 65.0 7e-94 MAHSPGLPAPTRSSYALLTGASQGIGAAMAKDLAARGYNVILVARREDVLESIAADLRSR HEVDAIALAADLSEAADVDRVIEFMAGKKISIIVNSAGIASFGKFMDQDWDYETRQFDLN GKAVHRLTRAALEQMLPRRSGAICNVGSAAGNVSIPNNATYVFTKAGVNAFTEALHYELK GSGVTCTLLAPGPVRDAVIPEEEQSIVDKVVPDFLWTTYESCSAETLDAMARNQRRVVPG PLSKVMNALGKIVPTPIVAPIIGSFYSKMA >gi|227860824|gb|ACLH01000096.1| GENE 22 22653 - 24200 694 515 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 467 1 440 456 271 34 3e-72 LPMSAFLDTLNSLIWSPALVFLCLGAGIYFTLATKFLQIRCIPDMLKQLKDGESSDSGVS SFQSLMISLAGRVGVGNIAGVATAIAFGGPGAVFWMWAVALLGSATSFVECTLAQVYKEK DQDTGEYRGGPAYYIEKAYKHTKVGPFMVVYGIVFAVAMILATSYFLPGIQANGVAAAVQ NAWGIEVGWSALVLGGILAIIIIGGVKRIANFASLVVPFMAAAYIIFAIIILIMNFNQIP EVFGMIFKSAFGAEQAFSGLLGSAIMWGVKRGIYSNEAGQGTGPQSAAAAEVSHPAKQGF VQAFSVYIDTLFVCSATAFIIISTDMYKVFEDESEDGPVRYAGSIPDDVAVGPGFVQHGL DTLLAGFGPSFVAIAIAFFAFTTVLAYYYMAEVNLTYFNRWISNKTTRRALVWLLRILLV VSVVVGATTTPGAAWALGDIGVGATAWLNIIAILFLQVPALKCLKDYSAQKAAGKDPQFD PEALGIKNAEFWVERKVARQEAAQKAIAEQSPFQG >gi|227860824|gb|ACLH01000096.1| GENE 23 24464 - 25096 724 210 aa, chain + ## HITS:1 COG:Cgl2421 KEGG:ns NR:ns ## COG: Cgl2421 COG1949 # Protein_GI_number: 19553671 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Corynebacterium glutamicum # 6 210 14 218 219 286 70.0 1e-77 MSDTPAKNDRLVWIDLEMTGLDPKRHVIVEVAAVVTDAELNILDEGIDIVVHATEEELAQ MDDFVTEMHAKSGLDKEIRESAITIAEAEEAVLKLVEKHCDANHPAPLAGNSIATDRTFI REYMPRLDAALHYRMIDVSTIKELARRWHPRAYYNQPDKGMAHRALQDIIESIRELDFYR RSVFRTDNGPSTPEAEELKGATTDDYQAFL >gi|227860824|gb|ACLH01000096.1| GENE 24 25410 - 26270 795 286 aa, chain + ## HITS:1 COG:Cgl1219 KEGG:ns NR:ns ## COG: Cgl1219 COG2375 # Protein_GI_number: 19552469 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Corynebacterium glutamicum # 8 281 5 277 283 327 60.0 2e-89 MAGQAKEAAPKRKPRKAHEATVTGRYQVSPDLVRLSMNSPAFMGKELEFTDHYIKLLFVP ESADYSWPFDVQQIREEQPRDKQPILRTYTLINLDSETGDFDVDFVSHGDSGLAGPWARV AEVGEKIGFLGPGGAWGPTADYEHFVFAGDESAAPAIGAGVQHLPEGATATAFIEIEAED RKFELPTREGVDIVWVIRNGATHGTELSRVVREAGIPEEKKTSWFIHGVAEMIKELRRFL FVESGIPKEDVSISGYWRIGMTEDQWQSSKREFNAAIEAEEERAKA >gi|227860824|gb|ACLH01000096.1| GENE 25 26298 - 26843 395 181 aa, chain + ## HITS:1 COG:ML1351 KEGG:ns NR:ns ## COG: ML1351 COG2094 # Protein_GI_number: 15827702 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Mycobacterium leprae # 10 181 23 206 214 138 44.0 5e-33 MIDFTDTADVVAPQLLGTVLTHNGVSVRITEVEAYLGADDEASHTFNGRTPRNAAMFGPP GRLYVYMSYGIHRNGNIVCAPEGTGQGCLLRAGEVIDGVDLAYQRRGDTEFHNLARGPGN LGKALGFSIADNGTPIRLKQRDKEPEWVRGPRIGISKNQDAALRFWIPFDKTVSRRRGLP R >gi|227860824|gb|ACLH01000096.1| GENE 26 26905 - 27783 840 292 aa, chain - ## HITS:1 COG:MT0979 KEGG:ns NR:ns ## COG: MT0979 COG0074 # Protein_GI_number: 15840376 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 291 4 300 303 340 67.0 2e-93 MSIFLNKDSRIIVQGMTGSEGMKHTRRMLESGSNIVGGVNPRKAGERVDIDGREIPVFGS VREAMQATEANVTVIFVPAKFTKDAAEEAIRAGIELVVIITEGIPVKDTAELYALGRESK TRIIGPNCPGLYTPGESNAGIIPAETAPNPGKIGLVSKSGTLTYQMMYELSDIGFSTCVG IGGDPIIGTTHISAIEAFQNDPDTEAIIMIGEIGGDAEEHAAAYIKDHVTKPVIAYIAGF TAPEGKTMGHAGAIVSGGSGTAEGKKAALEAAGVKVGKTPSQAAELVRAALA >gi|227860824|gb|ACLH01000096.1| GENE 27 27792 - 28976 1163 394 aa, chain - ## HITS:1 COG:Cgl2512 KEGG:ns NR:ns ## COG: Cgl2512 COG0045 # Protein_GI_number: 19553762 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Corynebacterium glutamicum # 1 382 1 379 402 410 62.0 1e-114 MEAEVDLYEYQARDLFEAHGVPTLKGIVATSAVQAEEAAAKLGTPVVVVKAQIKTGGRGK AGGVKLAHSPAEAAEKANEILGLKIKGHTVRKVMVAEGADIAAEYYFSILLDRTKRRYLA MLSKEGGVEIEKLAEERPDALIKRSFSPLDGMTDTLARDMAYEAGFDEGDVAKLVPVFKK LYTVYTEEDATLVEVNPLVKTSSGEIIALDGKITLDDNAQFRHPEHRDLQDHGATDPLEL KAQKMGLNYVKLDGSVGIIGNGAGLVMSTLDVVAYAGEDLSSQPKPANFLDIGGGANAEV MANGLEVILSDPQVKAVFVNVFGGITACDEVAKGIVQAYKILDSEGIEPKPLVVRLDGNN AELGRTILNDAHLPKLEQVETMDAAARRAAELAN >gi|227860824|gb|ACLH01000096.1| GENE 28 29204 - 30493 1111 429 aa, chain - ## HITS:1 COG:Cgl2423 KEGG:ns NR:ns ## COG: Cgl2423 COG1376 # Protein_GI_number: 19553673 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 43 426 13 398 403 426 60.0 1e-119 MWAVRLSALLSLSKSFYELGVSVRSLFPSARPAVLLSSLVATASLLAACTIGGAEDSSPA ENQSQEDVQASASAEASAAAKAKQLKFSVKDGASNVDPSEPVEVSSPAGLKSVTMTNEAG VEVEDELSSDSTTWKSAEVLGYNRTYTIDATDKDGTHKTITFTTPQAAAVSEVALSPLPD SEVGVGQVIGVRFGNYVTDRKAAEETIKVKTEPAVEGAFYWVNNQEVRWRPENYWEPGTK VTVDVDLYGRNLGGGVYGGEDASTNFTIGDRVITLIDNNTKMMSVFKNGEVLRRIPVSMG RDGQWDTPNGTYIIGDQYPSLVMDSTTFGLALDAGGYRTDVQWATQMSYSGIYVHAAPWA VGAMGSYNQSHGCINVTTEAAQWFQNTVKRGDLVKVSNTGGGVLSALDGLGDWNMDWATW SAGNADANQ Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:17:31 2011 Seq name: gi|227860823|gb|ACLH01000097.1| Corynebacterium aurimucosum ATCC 700975 contig00178, whole genome shotgun sequence Length of sequence - 57035 bp Number of predicted genes - 53, with homology - 51 Number of transcription units - 22, operones - 11 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 25 - 531 269 ## cauri_2068 hypothetical protein 2 1 Op 2 35/0.000 - CDS 543 - 1304 197 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 1 Op 3 33/0.000 - CDS 1295 - 2410 1138 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 4 1 Op 4 . - CDS 2413 - 3633 1310 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Term 3747 - 3789 7.3 5 2 Tu 1 . - CDS 3829 - 4107 421 ## cauri_2072 hypothetical protein - Prom 4179 - 4238 2.8 6 3 Tu 1 . + CDS 4306 - 4776 728 ## COG1225 Peroxiredoxin 7 4 Tu 1 . + CDS 4891 - 5418 549 ## COG1309 Transcriptional regulator - Term 5357 - 5390 0.7 8 5 Op 1 . - CDS 5432 - 5863 376 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 9 5 Op 2 21/0.000 - CDS 5894 - 6646 238 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 10 5 Op 3 16/0.000 - CDS 6649 - 7707 1397 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 11 5 Op 4 . - CDS 7704 - 8735 1284 ## COG1879 ABC-type sugar transport system, periplasmic component 12 5 Op 5 . - CDS 8797 - 10788 1704 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 13 5 Op 6 . - CDS 10794 - 17717 5866 ## COG4982 3-oxoacyl-[acyl-carrier protein] reductase 14 5 Op 7 . - CDS 17723 - 17893 228 ## gi|262184906|ref|ZP_06044327.1| hypothetical protein CaurA7_13008 15 6 Tu 1 . + CDS 17931 - 18713 767 ## cauri_2080 putative secreted protein 16 7 Tu 1 . - CDS 18988 - 19128 93 ## + Prom 18923 - 18982 3.5 17 8 Op 1 49/0.000 + CDS 19082 - 20065 1368 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 18 8 Op 2 13/0.000 + CDS 20066 - 21151 1191 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 19 8 Op 3 11/0.000 + CDS 21148 - 23118 638 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 8 Op 4 . + CDS 23176 - 24876 2776 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 24944 - 24998 12.2 - Term 24938 - 24980 11.6 21 9 Op 1 . - CDS 25001 - 26197 1782 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 22 9 Op 2 . - CDS 26303 - 27553 1627 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 23 9 Op 3 11/0.000 - CDS 27558 - 28427 997 ## COG1180 Pyruvate-formate lyase-activating enzyme 24 9 Op 4 . - CDS 28428 - 28679 453 ## COG1882 Pyruvate-formate lyase 25 9 Op 5 . - CDS 28715 - 30808 2906 ## COG1882 Pyruvate-formate lyase + Prom 31083 - 31142 1.7 26 10 Tu 1 . + CDS 31181 - 33103 2375 ## COG2233 Xanthine/uracil permeases + Term 33234 - 33285 6.3 - Term 33116 - 33168 4.4 27 11 Op 1 . - CDS 33174 - 33779 540 ## cauri_2091 putative secreted protein 28 11 Op 2 . - CDS 33839 - 34186 217 ## cauri_2092 hypothetical protein - Prom 34213 - 34272 5.7 + Prom 34220 - 34279 2.4 29 12 Tu 1 . + CDS 34299 - 35069 448 ## COG1349 Transcriptional regulators of sugar metabolism - Term 34979 - 35014 -1.0 30 13 Op 1 . - CDS 35066 - 35422 386 ## cauri_2094 hypothetical protein 31 13 Op 2 . - CDS 35419 - 35817 317 ## COG4578 Glucitol operon activator - Prom 35984 - 36043 80.3 + TRNA 35961 - 36042 64.8 # Leu TAG 0 0 32 14 Op 1 8/0.000 - CDS 36407 - 37018 383 ## PROTEIN SUPPORTED gi|90023287|ref|YP_529114.1| ribosomal protein L33 33 14 Op 2 3/0.000 - CDS 37012 - 37740 879 ## COG0689 RNase PH 34 14 Op 3 4/0.000 - CDS 37763 - 38530 560 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 35 14 Op 4 3/0.000 - CDS 38598 - 39374 821 ## COG0796 Glutamate racemase 36 14 Op 5 . - CDS 39374 - 40096 785 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 37 14 Op 6 . - CDS 40161 - 40667 588 ## cauri_2101 hypothetical protein 38 14 Op 7 . - CDS 40702 - 41037 389 ## COG2127 Uncharacterized conserved protein + Prom 41031 - 41090 5.2 39 15 Tu 1 . + CDS 41126 - 41704 492 ## cauri_2103 hypothetical protein 40 16 Op 1 1/0.000 + CDS 41836 - 43098 1619 ## COG1488 Nicotinic acid phosphoribosyltransferase 41 16 Op 2 . + CDS 43135 - 45096 1867 ## COG1199 Rad3-related DNA helicases 42 17 Op 1 1/0.000 - CDS 45093 - 45818 568 ## COG1990 Uncharacterized conserved protein 43 17 Op 2 3/0.000 - CDS 45811 - 46995 1274 ## COG0560 Phosphoserine phosphatase - Term 47033 - 47079 17.2 44 17 Op 3 . - CDS 47108 - 48799 2430 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 - Prom 48886 - 48945 3.0 - Term 49059 - 49120 15.6 45 18 Tu 1 . - CDS 49140 - 50129 1336 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 50165 - 50224 2.3 + Prom 50149 - 50208 3.1 46 19 Tu 1 . + CDS 50234 - 50944 773 ## COG2186 Transcriptional regulators - Term 50887 - 50933 8.0 47 20 Op 1 18/0.000 - CDS 50941 - 53112 2944 ## COG0209 Ribonucleotide reductase, alpha subunit 48 20 Op 2 11/0.000 - CDS 53166 - 53591 404 ## COG1780 Protein involved in ribonucleotide reduction 49 20 Op 3 . - CDS 53601 - 53840 281 ## COG0695 Glutaredoxin and related proteins 50 20 Op 4 . - CDS 53776 - 53967 119 ## - Term 54246 - 54298 11.5 51 21 Op 1 . - CDS 54315 - 54437 202 ## PROTEIN SUPPORTED gi|227490822|ref|ZP_03921138.1| 50S ribosomal protein L36 - Term 54477 - 54514 1.5 52 21 Op 2 . - CDS 54561 - 55868 1115 ## COG0477 Permeases of the major facilitator superfamily 53 22 Tu 1 . + CDS 55758 - 56741 860 ## COG0171 NAD synthase Predicted protein(s) >gi|227860823|gb|ACLH01000097.1| GENE 1 25 - 531 269 168 aa, chain - ## HITS:1 COG:no KEGG:cauri_2068 NR:ns ## KEGG: cauri_2068 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 168 1 168 168 294 100.0 1e-78 MSRNSPENLLLYLTPEDEDTIREVYAALAQRGFPVQHQRPHITVTFAPALETAVVDEART LLPTLLPALFHRVGTVVFGRKSKQTVAWLLEATDELEIAARQISAANPEGRGPRWTPHLT MGLRLPRALVPDYMRALDEIAGPEHKEFTAELAAWWRPKTQRLEVFGD >gi|227860823|gb|ACLH01000097.1| GENE 2 543 - 1304 197 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 14 222 11 226 245 80 27 2e-14 MDVELTIADLTAGYGSRTVVDGLSLPTLRGGQVVGLLGPNASGKTTTIKALAGVHRARGG TVDFRVDGQAPRGQRRRQLIGYVPQGLPHTAALRAFEAVLIAARREACEDPITRTAEVLH SMGLDEIAQRYLNELSGGQRQLVAVAQMLVGTPGLMLLDEPTSALDLNRQLFVLGRVRAK AREEGSLALVAIHDINLAARMCDQLVVLHGGKGRAHGAPGEVLTEELLREVYGVETDVLD HRGQPVVALREVS >gi|227860823|gb|ACLH01000097.1| GENE 3 1295 - 2410 1138 371 aa, chain - ## HITS:1 COG:AGl2865 KEGG:ns NR:ns ## COG: AGl2865 COG0609 # Protein_GI_number: 15891544 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 32 370 16 355 355 243 46.0 4e-64 MSILTSTGRSASPERTTRAETAVLPVEALAREHSRVTRRRIAIVAGLIVVALAAFVVSVI VGAIDLTPGQVLRGMVDPGGVDKQTRTVLWSLRLPMAVMALLIGASLSLAGAQMQTILDN PLAEPFTLGISAAAAFGGASAIVLRWQLLAQPQFNLALIAWLSAALATAIIVVAAVIRGA KSETMVLLGIGLVFFFQAMLALIQYRSSSEALQQIVFWSMGSLTRASWQANAVLASALAV ALPILGALSWRLTALRLGDARATALGVNTSRLRVIVLVVVSLVAATTVAFAGIIGFIGLV GPHIARMLVGEDQRYFVPASMAAGAAVMCAAHALSLVIKPGLAIPIGIVTSLLGVPFFIA IVMTRRRALWT >gi|227860823|gb|ACLH01000097.1| GENE 4 2413 - 3633 1310 406 aa, chain - ## HITS:1 COG:AGl2862 KEGG:ns NR:ns ## COG: AGl2862 COG0614 # Protein_GI_number: 15891542 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 57 403 27 370 377 251 38.0 2e-66 MLHVSTPAAQASRHRAGRVVGACAIVTALAGALAGCASDNADAGSEQSTGAQGTAAVSFT DLAGRQVELDHEPERVILGEGRSVFATGILNKEDPLDKVVAIGSDLKQNVPDYYHELEKA TPKVNELPEIGGFTKGDVTVEELISLDPDLIVLSKDQYEASQTAGLTDKLDQAGLTYAVT DFRAKPLENTVPTMRIFADIFGHEDRAEEFIADWQKNVDLVTERATKAQGKPSTFVWRAA GISDCCGSWNDSNISELVNVAGGKNVADDIIEGESGALTPEKVIDADPDMIIATGGDWSA KVDNAKGHTGFAAVGYGISDKDAHDSAATLAGVQPGFEDLSAVKEHNLHGLWHQFYNSPF NYLALLQIAAWLHPEDYTDVNVQQEWAEAQEKYSPVPGDGTFFSTN >gi|227860823|gb|ACLH01000097.1| GENE 5 3829 - 4107 421 92 aa, chain - ## HITS:1 COG:no KEGG:cauri_2072 NR:ns ## KEGG: cauri_2072 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 92 1 92 92 130 100.0 2e-29 MARNIDDIQRDIERTRRQLASTLDELADRSKPQNFVEDAKGAATQKLQERNVQMALAGVG AAVVGLIAFSVFRSKRRKSDIKELQRLLAERR >gi|227860823|gb|ACLH01000097.1| GENE 6 4306 - 4776 728 156 aa, chain + ## HITS:1 COG:Cgl2438 KEGG:ns NR:ns ## COG: Cgl2438 COG1225 # Protein_GI_number: 19553688 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 1 153 1 153 158 244 75.0 7e-65 MTEAQRLSVGDKAPAFSLSDDSGNTVSLSDYAGQRVVVYFYPRANTPGCTKEACDFRDSL EQLNGMNIAVVGISPDKPEALAKFREDHELNFPLLSDPDKEVMTAYGAFGEKKNYGKIVQ GVIRSTFLVEEDGTIGQAMYNVKATGHVARVLKGLN >gi|227860823|gb|ACLH01000097.1| GENE 7 4891 - 5418 549 175 aa, chain + ## HITS:1 COG:Cgl2439 KEGG:ns NR:ns ## COG: Cgl2439 COG1309 # Protein_GI_number: 19553689 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 1 173 45 220 221 217 68.0 9e-57 MDYGFESFTFDEVSRRAEVPIGTLYQYFANKYVLICELDRQDTAEMLAEVERFSQRVPAL QWPDFLEEFIDRMARVWRNDPSRRAVWHAVQSTPATRATAADTELSLLKPIAEIIEPLAQ GMDANARVEIAAFLVHTVVSLLNYSTMRSEESFDGVVEEIKRMLIAYLFAIATSA >gi|227860823|gb|ACLH01000097.1| GENE 8 5432 - 5863 376 143 aa, chain - ## HITS:1 COG:Cgl2440 KEGG:ns NR:ns ## COG: Cgl2440 COG0736 # Protein_GI_number: 19553690 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Corynebacterium glutamicum # 6 139 2 133 135 155 64.0 2e-38 MTMSGVSVGTDLVHIPSFAQQLELPGTRFAQVFSASELRVAQARGVSGAARAQHLAGRWA AKEAFIKAWSQALYGRPPALAEEAVDWAEIEVRPDAWGRVALELRGEIACLARESLGDFS MALSISHDGDYATAIVYLSRPTP >gi|227860823|gb|ACLH01000097.1| GENE 9 5894 - 6646 238 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 226 245 96 29 4e-19 MIELHDISQTFGNFHALRGINLSVKEGAVTCVLGDNGAGKSTLIKILAGLNQPTGGTITV DGEEVSFASPRDSLDAGIATVYQDLALVPSLPVWRNFFLGQELTGALGSLREEEMKRITN EQLSEMGIELGDVSVELSALSGGQRQVVAIARAIYFGARYIILDEPTAALGVKQSGMVLR FIDAARERGMGVVFITHNPQHAYLVGDHFIVLTVGQMSLDASKEEVTLPELTQWMAGGDE LEELKQELAR >gi|227860823|gb|ACLH01000097.1| GENE 10 6649 - 7707 1397 352 aa, chain - ## HITS:1 COG:Cgl0031 KEGG:ns NR:ns ## COG: Cgl0031 COG1172 # Protein_GI_number: 19551281 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Corynebacterium glutamicum # 28 352 16 340 341 401 72.0 1e-112 MSETASASDEALSSPADTRLTRRSGFARLIRRPELASLLGAVVIFVLFMIVAPAFRSVEA FSTVLYASSTLGIVALAVGLLMIGNEFDLSSGVAVTSAALVATMLNYNFHLNSWVGVGLS LITALAIGALNGFLVVRTKIDSFLITLAAFLMLQGLNLAITKLVTGQVATPTIADMEGFG SARVIFAGTIHIGSLSIRATVIWWILFVAIASWVLYKTRWGNWIFAVGGDDEAARAVGVP VRRVKVALFMLVGFAAWFVGMHTLFAFDSIQAGQGIGNEFLYIIAAVIGGCSMTGGRGTA VGTAIGALIFGMTNQGIVYAGWNPDWFKFFLGAMLLFAVLTNTSVANFTRKR >gi|227860823|gb|ACLH01000097.1| GENE 11 7704 - 8735 1284 343 aa, chain - ## HITS:1 COG:Cgl0030 KEGG:ns NR:ns ## COG: Cgl0030 COG1879 # Protein_GI_number: 19551280 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 63 343 1 280 280 385 69.0 1e-107 MEKSRHLGHHARVKKAKKPLLGLIAVAAAAVLTACSATGGAPRPEADGELAGGVDTERLV VAMISHGAPGDTYWDLVRKGAEDAARKDNIELRYSSDPEAPNQANLVQSAIDSGVDGIAV TMPNSGAIGPVTKKAADAGIPTVGLNAGMDDYQKYGMSAFFGQEEKVAGTKAGERLKEDG AKHVLCVIHEQGNSSQESRCAGVKEGLDNGKVEILYVNGKDLTSAQSTINAKLSQDPSID WVMALQASVAMRSTDAVADASSKAKVSTFDTNAELVDAIADKRIEWAVDQQPYMQGYLAV DSLWLAHRNGSTMGGGRPVYTGPSFVDSTNVDIISESAKEGLR >gi|227860823|gb|ACLH01000097.1| GENE 12 8797 - 10788 1704 663 aa, chain - ## HITS:1 COG:Cgl2444_6 KEGG:ns NR:ns ## COG: Cgl2444_6 COG0304 # Protein_GI_number: 19553694 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Corynebacterium glutamicum # 167 656 1 488 488 707 75.0 0 MEWISPDFSGATQSLEDMVVIVGAGELGPLGSSRTRYEAEVGGDLSAAGVLELAWSRGLI RWDEHTAGWLTAEGEELAEEDVYARFHDEVLAGIGVRRFHDDFGPHLPMVDNLAPELTTI YLEKPLSFTVQDEETARSFVDGCEGATLRRVSDSTGEIEWQVTRPAGSAVRVPRRVAMTR FVGGQIPEGFDPQVYGIPADMVDNLDRLALWNLVCTVDAFLSAGFNPAELLAHVHPARVS STQGTGMAGQEALRSLYVDKLLGQPRPNDILQEALPNVIAAHVMQSYVGGYGQMVHPVAA CATAAVSVEEGVDKLRLHKADFVVAGGIDALSIEGITGFGDMAATADSAGMAAKEIDYRF FSRANDRRRAGFVESEGGGTILLARGTFAAEMGLPVLGVVGFAESFADGAHTSIPAPGLG ALSAARGGRESRLASSLKALGVGPDDISVVSKHDTSTNANDPNESDLHERIAAALGRSPG NPLYVISQKSLTGHAKGGAAAFQLIGLTQVLRSGILPPNRSLDCVDPVLRRHEHLLWLRQ PLDLRRTPPKAGLVTSLGFGHVSALIALVHPGAFFAALAREQGEGVAEAWRAAATERERR GLRRLEEAMRGGTALYERPVNRNLGSVPATEVSEREAAVLLSDSARLRDGMLDPEGGNTT QRG >gi|227860823|gb|ACLH01000097.1| GENE 13 10794 - 17717 5866 2307 aa, chain - ## HITS:1 COG:Cgl2444_5 KEGG:ns NR:ns ## COG: Cgl2444_5 COG4982 # Protein_GI_number: 19553694 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier protein] reductase # Organism: Corynebacterium glutamicum # 1676 2265 50 641 843 605 56.0 1e-172 MSDFHVSVPLFARLDSEPFALSFSGQGYAWLPSLRDALATGVRPKIAAFLSAAEELLAPL EEELLAAAPHGFAPLAWADSEPAWAHALADASLSTPGILTAQLAVLESLRAHGIDLEDAV TNIGHSQGVLAAAVAEGRMSPAEALALARLIGAAMTTTARSAGLVRTAQGAPMAAVTGAT KQQLHEAGAHIGLDNGRGRFVIVGTPAELARVKATLQERSALTEEPEGESAAVAVTDLEV SAAFHHPTMRYAVEQVESWAERIGLDPENTAQLARAVLTDYVDWPERVDSALKAGARWIL EVGPTRGVEPLTRDLVAGHGVGTLAVATVEGLAQLVEPGRAPSLPRAWSEWAPRVADGRL STAFTRATGYSPVMLPGMTPTTVDPGIVAAAANAGHWAELAGGGQHTDDILQENLRTLRR LLQPGVNAQFNALYLAASQWRRQIEGPNSILRARAGGAPINGVVISAGIPPVEEAVELVA KLHAENFPWVVFKPGTSAQVEEVLRIADALPETTVIMQLEGSAAGGHHSLEGLDEVLVAT YARIRERDNVLLAVGGGIGNPARGAEYLLGTWAQRFGLPAAPVDAIMVGTAAMAAKESTA SESVKQALVTAHSGDVVSGRSDLGADIHELDNSFARAGRLLDEVAGDAAAVETRRAEIIE AIGRTCKPYFGDLDEMSYSEWLQRYLELSYLDGWGDESWFSRFTRMVARAEARLHPTDHG EIALCVEADRENPAEAINQLTELYGDAALHPTDAAWFIQLVDGPGKPANFVPVIDTDVRR RWRRDTLWQAHDEHYEADEVCIIPGTAAVAGIEQANEPVAQILGRFEQAALALLDGTEDD SGEPAFSTEELIRRAPTLNWAGREQPNPLSLGLAGAELEATGAEAMWLTVPFHSGAELRA RITPPSIPGASPLVKVEDAETAMRELLRQALGGDLPDVSSGTATISAHLSATDIAHYSAV TSGEMSATVSPDVLVGPAWPALFAVLASARTESAEPVVEGFLDLVHLEHSMSLKPDTWEL LRASAAPGSEPLDLRYTAELEEVRDTPSGRVVDVSVGVTAAVRGEEHEFAQLHERFFITG RRGDAALELARATAQGSQENSAEPSFRETPRSFRHRTTAVAPEFLLPFAVVTGDRNPIHL SSNAAALAGHREGPIVHGMWTSALAQAAAAFDGARVLEWSATWLAPVLPGSEVEFEVERV GVDKRCGYGEVRSVTATSQGVPVLQARATMSSPTTFYAFPGQGIQSPGMGMKDYAESAAA RAVWERADKHTRQDLGFSILEIVRHNPDTVVVDGETFTHPDGVLYLTQFTQVAMATLGCA QIAALKEAGVLESGAFFAGHSVGEYNALAAYAGVLSLEAVLDIVYVRGLTMHRLVERDSV GQSLYGLAALRPHKMGMSAGEAFAHVARVAAETGEFLEVVNHNIAGRQYAVAGTKAGLEA LAHDAERRAPGQRAVIPIPGIDVPFHSSRLVGGVADFRAHLDALIPEEINLEALVGRYIP NLVARPFALSREFVEAIAEVVDSEPLAEILEDFDGAIACPARMGRTLLIELLAWQFASPV RWIETQDLLLGQLGVERFIEVGVGTAPTLTNMLGQTLRLPQYAGSTGIEVLNYERDRGRV FAEDAEPAPEPAAQVAGQPDTAEAEPAESESRQPTESTHREDSVHAPREETSAAVEDLPL SVHQALEMLIALWTKVRPDQMAATDSIETLVEGVSSRRNQLLVDLGVEFGISAIENAADA PIPQLAESVAQRAPGYATFGEVLAEHVAQALTRLTGPAGTKPSYVAERVSRTWGLGPGWV DRATVQMVLGTREGSSLRGGELASLPMTGAASVAELDALIDDAVRAAGEREGLSLQKAVA ATPHETLDPEAVRAYTERLESALEDSARAALAALGREETPTEQGDSAALSELEQLVAVEL GPDWQQRIAPAFDACKAVLLDDRWARAREDIARAAAAGEAEPELDVLGAGEEVALLAEHF GYEDLARDARTPADGLLFADQVAVVTGGSPGSIAAELIGELLAEGATVIATTSQLSHERL EFYKQLYRSHAVGAAALWVVPANLTSFADVEALVEWIAMVRTATVGGESVRLKPAYVPDL LFPFAAPRVAGTLQDAGAGAESQMRLLLWSVEKLIASLSVVGADTHIGHRLHVVLPGSPN RGRFGGDGAYGEAKAALDALVNRWSSEQSSWGARTSLVHAHIGWVRGTGLMGGNDPLVEQ VEACGVRTFSAKEMAVQLLDATASPDIRAEAAQAPLSVDLTSGLARLSWTLLHLPARRSP RPPMLRAQPIARAKGKRCVRSRPYRTC >gi|227860823|gb|ACLH01000097.1| GENE 14 17723 - 17893 228 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262184906|ref|ZP_06044327.1| ## NR: gi|262184906|ref|ZP_06044327.1| hypothetical protein CaurA7_13008 [Corynebacterium aurimucosum ATCC 700975] # 5 56 1 52 52 85 100.0 9e-16 MSIDMFFDEYLAERGLKRSAEVVPDHACQVFSDASESKTQSSLDEAAQLVARTLGE >gi|227860823|gb|ACLH01000097.1| GENE 15 17931 - 18713 767 260 aa, chain + ## HITS:1 COG:no KEGG:cauri_2080 NR:ns ## KEGG: cauri_2080 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 260 1 260 260 432 100.0 1e-120 MATRTPFFIAALLNAAVAVLVAVGLLLPSPAAPPAAGPSASTTTAEPAQEGQTEEPAEEA TPGPSSAPDVAEALAALDSLEVKGRAPMTGYERELFGQAWSDDVTVQFGHNGCDTRNDIL RRDLVPESLVLKEGTHDCVALAGTLHDPYSGQDIEFQRGAQTSRAVQIDHIVPLADAWQK GAQQWSPEKRRNFANDPRNLLAVDGPLNQQKGAGDAATWLPPNKGFRCEYARRIVEVKAA YGIWVTEAEKDALSRLLNAC >gi|227860823|gb|ACLH01000097.1| GENE 16 18988 - 19128 93 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTSQLAVFLMMYLNITVPSQGLSQQIREAQRLMKANAVNVTQTSG >gi|227860823|gb|ACLH01000097.1| GENE 17 19082 - 20065 1368 327 aa, chain + ## HITS:1 COG:MT1320 KEGG:ns NR:ns ## COG: MT1320 COG0601 # Protein_GI_number: 15840730 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 1 327 1 325 325 197 36.0 2e-50 MFKYIIKKTASWLVVIFLATNIAYLLAATFLDPRSNYVGRNPPLGPEEIGRILTPLGLNP ETPLIERWWGWLSNIIFHWDWGTSPLGDPVSAQIAHRALVSAQLLLVATILSVIIGVALG VYTASRQYKAADRFWQGVSIITMNTHVVVASILVVAAGLWINRVTGHRVVYVTGASSLGV EGFFPKLLDMAQHLILPSISLIIISYAGYHMMQRTLLLDNLNADYVRTARAKGLTRAQAI RKHALRTSIIPVATSVAFSVPGIFTGAIMTETIFAWKGMGQYFIETISRNDVNGTTAVAA FGAVMIAFSAILADLVVVALDPRVRVS >gi|227860823|gb|ACLH01000097.1| GENE 18 20066 - 21151 1191 361 aa, chain + ## HITS:1 COG:MT1319 KEGG:ns NR:ns ## COG: MT1319 COG1173 # Protein_GI_number: 15840729 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 80 357 6 285 291 226 45.0 7e-59 MSPEKKSTSPRSEARHTERHRRNDLAIDTAADNLGVRPHTATADFSPQTEPSAQSALGSG VDVDDAQRKQFAGNEFRGTSKLKLYVRRFFRNKAAAIGLVIFVLLALLAIFGSFLTPWSF DEPDFFNLSTGPSSEHWFGTTDSGNDLFAQTVHGLGRSLIIALIVSLASTLLSAFIGAAA AMYGGAVEKVILAVIHFLLAIPTFLLIALVVSDSGGDWKLLIVVLIAFGWMYPARVIWAM ALSVRENDYVRAADYMGVSRLRTIFRHVVPNIGSLLIIQAALGVVSTIMSETALSFLGLG VKLPDVSLGTLLAGGANAVEASPWLFYFPAGILTLLTVSMAFIADGLRDAIDPNSNSGGR A >gi|227860823|gb|ACLH01000097.1| GENE 19 21148 - 23118 638 656 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 381 645 12 277 329 250 47 1e-65 MTPQNTAHTANADPASRATDPAASTEPVLSVRNLTVTFPSEAGSVHAVRGVDFDLMPGRT LAIVGESGSGKSVTSLAVMGLLPDYAKVEGSVVYAGTELIGKSDKEMSKIRGKDIAMIFQ DPLSSLTPVFSIGDQLIEAIQTHRDVSKKEAEKEAIRLLELVGIPEADKRVKSFPHEFSG GMRQRVVIAIAMANNPRVIIADEPTTALDVTIQAQILEVLKVAQRETGAAVIMITHDMGV VAGTADDVLVMYAGRPVELGDVDTIFNNPKMPYTVGLLGSTPRVDKATDEPLTPIAGTPP RLIEVAAECPFADRCPVVKDECRTVEPELRELNDVPGHYASCLRSDEIKDGTIGGERMYP LPKISADTLGDTPYDQRPVTLEVKNLVKDFPLIKGAILKRRVGTVHAVKNVSFDVHQGEC FAIVGESGSGKTTTLLEIMDLNPPEGSTIVVNGTNTSGLSASARRKLRKDIQIVFQDPMS SLNPRMTIREIIAEPLESLGYEGDVGQRVAELMKLVGLESHQVDRFPGHFSGGQRQRIGL ARALATNPSIVVLDEPVSALDVSIQAGIINLLHDLKNRLGISLVFVAHDLSVVRHLSDKV AVMYKGDFVEYGPTDEVFDNPQHAYTRALLSAIPVPDPAMERDRVREIYQPAETPA >gi|227860823|gb|ACLH01000097.1| GENE 20 23176 - 24876 2776 566 aa, chain + ## HITS:1 COG:ML1121 KEGG:ns NR:ns ## COG: ML1121 COG0747 # Protein_GI_number: 15827554 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mycobacterium leprae # 10 566 8 556 557 279 33.0 1e-74 MNMKLRRTALAVVTASALILTGCASDGGSGSSDGSSDSASGEKLDVKLDGSYNPKDRSEL KEGGELRLAIDEISQQQNPFQADGTRYTSDVWKYYNPQIGLFDGAGEFHVNNDYITDVKD EEKDGKTVVTFTIHEKAQYNDGTPIDWKAFENTWKFNNGEDEEANVSSTDGYELIESVEP GENDKQAVITFKQTYPWWQGLFNILLPPQVDSAEKFNEAYLGKVHPEWGAGPFKVENVDF QSGTATFVPNEKWWGDKPFLDKVTYRQMEDQASINAFKAGEIDATGVGNKERLAAVKDME GIEIRTAMAPSKSLYTLNSKNEILSDIKVREAIMAGIDRSTLSEIRFNGLNGYTEDLPGS FNLYQTQEGYEDNVGAVITFDPEKAKSLLDEAGWKEGSDGIREKDGKKLSVRYSLLGDSP TGKAQATATQKMMKDIGVDLKVEERPVADFSEITSSYDFDILPMGFSSGDPFGVAYFGQV YRTGSQLNRSGTGTPEMDKKIDELSQIADPKEQIKESNKLEKEALAQYGIIPIFNGPAMV ATNPDIANFGANSFAVLEVENIGYVK >gi|227860823|gb|ACLH01000097.1| GENE 21 25001 - 26197 1782 398 aa, chain - ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 1 281 2 285 296 209 40.0 7e-54 MGGLIVIGVILLIIIATAFDGFYIVRTKEAAIIERMGKFVNVAHAGLHFKVPYVDRVRAK ISLQIRQLDVMVETKTKDNVFVQIPVAVQYEVVQGSERQAFYTLSNHEQQIVAYVQDNVR SSVANMNLDDSFSSKDTIARNVAMSLRDNMAAYGWNFVNTLVTDIRPDARVRESMNSINA AQREREAAVAQAEAEKIRVVKEAEGAAEAKKLQGRGVADQRKEIVEGIAQQYELLRAAGV QENPETLMLVSQYLDAMVDVADRAHTNVLYMPSNPGGMQDLFGGMRDTLLSTNAINEAPK PKVPAGEAKHSREDAAAERRRREEQERRERDERARREAEAMEQAQRAQQQAQEQVQNAQQ GQGFGQISGFPAPPQGNNQPQSARDYFDQLRNQLNKGN >gi|227860823|gb|ACLH01000097.1| GENE 22 26303 - 27553 1627 416 aa, chain - ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 8 416 24 424 427 243 37.0 7e-64 MKRFGHTIKEHTITVPWDYDNPAAGEFELYAREIIPPGGENYPALLYNQGGPGFPAPRPT GATGLIGKGLERYRWILMDQRGTGRSHRIDELSPAEDRTAQRLAQLRQENIVRDAERLRE HLGEDTWDLFGQSFGGFIITAYASMFPDSIGRAFLTGGLPTLTKGADDLYRTTFTKLKVR HERFYAQFPWAQARVEEILHHLDNSEELLPTGERLSSRRFRTIGIELGRGTGFDSLGYLL EEPFRTVNGEKRLRSDFLNNVGSRVSFQAGPLYAAIHESIYGGVGGQAVTGWAAHRVREE FPEFAEEGTYLTGEHIFPWQFDEDPALRPFKQAAEELAAYEWASSPYDAAKLADAPVIAS AAIYLDDIFVPFEDSLATGETYRDLRPVVTNRFQHNGISEDGAVILGELFRAADER >gi|227860823|gb|ACLH01000097.1| GENE 23 27558 - 28427 997 289 aa, chain - ## HITS:1 COG:FN0261 KEGG:ns NR:ns ## COG: FN0261 COG1180 # Protein_GI_number: 19703606 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Fusobacterium nucleatum # 52 289 5 239 243 202 42.0 7e-52 MADGITGVVRLSPEEGEKVRGAAAGLGTDNDLDGYTRPELMQARRSGDVALVHSWELVTA VDGPGTRMTMFMSGCPLRCQYCHNPDTMEMKVGTLERIEDVVKRIKRYKPVFKASGGGLT ISGGEPLFQIAFARRLLKEVHDAGIHTTIDTSGYLGARLRDEDLDNIDLVLLDVKSGDEE TYKKVTRRELQPTIDFGDRLNAIGKPVWIRFVVVPGLTDGPENVANVAKIVSRWKSNIER IEVLPFHNMGADKWHELGYPYTLEDTKPPKPEDVEEIREVFRKEGFVVY >gi|227860823|gb|ACLH01000097.1| GENE 24 28428 - 28679 453 83 aa, chain - ## HITS:1 COG:SA0218 KEGG:ns NR:ns ## COG: SA0218 COG1882 # Protein_GI_number: 15925929 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Staphylococcus aureus N315 # 16 81 677 747 749 95 64.0 3e-20 MATPTFDERLATMKANRTANNMDSGLYHANINVLDKATLEDAVEHPEKYPNLTVRVSGYA VNFVKLTREQQLDVISRTFHQGS >gi|227860823|gb|ACLH01000097.1| GENE 25 28715 - 30808 2906 697 aa, chain - ## HITS:1 COG:FN0262 KEGG:ns NR:ns ## COG: FN0262 COG1882 # Protein_GI_number: 19703607 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Fusobacterium nucleatum # 12 692 2 682 743 825 59.0 0 MTTATEQSVQFEAWKGFEPGPWTENIDVRDFIQRNYTPYDGDSSFLAGPTEKTQRVWDHL EKNYLSVERQKRIFDVDTHTPSDIDAFPAGYISEDDDVIVGLQTDTPLKRAMMPNGGWRM VKQAIKEAGKETDPEIEKIFTRYRKTHNDAVFDIYTPRIRAARSSHIITGLPDAYGRGRI IGDYRRVALYGVDYLIAEKEASKSAVGNLGFSEHWARYREEHAEQIKALKKLKVMAESYG FDISKPAKTAHEAVQWTYFGYLASIKSQDGAAMSIGRLSAFFDCYFERDFAAGIITEEDA QEIIDQLVLKLRIVRFLRTEDYDQIFSGDPYWATWTDAGFGTDGRHQVTKTSFRLLQTLI NLGPSPEPNITIFWDPQLPAGYKEFCAHISIETSSIQYESDKQIRDQWGDDAAIACCVSP MAVGKQMQFFGARVNAAKALLYAINGGRDEVSGKQVVDGYEPIQGDGPLDFDEVWQKYEE MLDWVVGTYVEALNIIHYCHDKYAYEAIEMALHDSDIVRSMGCGIAGLSIVADSLSAIKY AKVYPVRDETGLIVDYKTEGDFPFYGNDDDRADDIAATIVHTVMAKIKAIPMYRNAIPTQ SVLTITSNVVYGKATGAFPSGHEAGTPFAPGANPENGADNHGMVASMLSVGKLDYKDALD GISLTNTITPSGLGRTPEERITNLVGVLDAGFIMDSE >gi|227860823|gb|ACLH01000097.1| GENE 26 31181 - 33103 2375 640 aa, chain + ## HITS:1 COG:Cgl2307_1 KEGG:ns NR:ns ## COG: Cgl2307_1 COG2233 # Protein_GI_number: 19553557 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Corynebacterium glutamicum # 5 438 15 453 453 634 78.0 0 MSDTAATASPATPPTHPVDVVPPAPKLAALGLQHVLAFYAGAVIVPLLIAGSLGLDEATT IHLINADLLTCGLATLIQAVGVGKHIGVRLPIIQGVTTTAVSPIIAIGMSAGDQPLPTIY GAIIAAGIFTFFAAPVFGRVLKYFPPIVTGTVLLVMGTSLLAVSANDFVNYADGVPAARD LLYGFGTLAIIIVVQRFFRGFLGTLSVLLGLVIGTGVAFVLGDTSFDGVREADAIGMTTP FYFGMPKFDIMAILSLIIVMIITMVETTGDVFATGEIVKKRIKRDDVVRAIRADGLSTTL GGVMNSFPYTCFAQNVGLVRLTGVKSRWVAVSAAGFMIILGLLPKAAAIVAAIPSPVLGG ASLALFANVAWAGLQTIAKEDIADGRNAAIVTTALGLAMLVTFKPDVATAFPEWAQIFVS SGMSIGAITAILLNLLFFHVGSQSGDDVSRLDGTGVSLKELNEMDRDSFVGALRPLFNNE TWPLEAAWELRPFQDVSQLREAIQVTVLTAPSDQRRALIHDYPAMDELLLADSDTAATIS ADRGSLALDDLDDVQTQQLIDVSRAYRERFDMPFVAYLDTNDSADRVIDAGVRRLSNSDE LEQRVVLSEIIEIANDRFDILLADANPVRAYWDRKFTEVE >gi|227860823|gb|ACLH01000097.1| GENE 27 33174 - 33779 540 201 aa, chain - ## HITS:1 COG:no KEGG:cauri_2091 NR:ns ## KEGG: cauri_2091 # Name: not_defined # Def: putative secreted protein # Organism: C.aurimucosum # Pathway: not_defined # 1 201 1 201 201 385 100.0 1e-106 MSPRKLSTTLIALVVLLSLACAALGVYAVRQPHEVYSAPVQSTNSQVVKAVEREEQVVLL SLGIQGLAEKSSAGQVFGVKVPWTDRTQFVHYSYKAKLGIEGKDVSVTETGEHSYTVHIP DFIFIGHTDEEFKTAVENNGVLSWTTQPLDAASTVSDVLSADKKRKDINDNRELLQDQAR NFYESIIRGVDPEAQVTMEFS >gi|227860823|gb|ACLH01000097.1| GENE 28 33839 - 34186 217 115 aa, chain - ## HITS:1 COG:no KEGG:cauri_2092 NR:ns ## KEGG: cauri_2092 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 115 4 118 118 188 100.0 6e-47 MRKTITLGLMMGKRLAENIATYAPQGVSTRWIGSEAEARACDGVIVDATEFAGVLPGQVV LVLGDVNGVAEERLRKSGSVVMDRHLRTHIDTLLMAFAAFAEQQALVSAAAGEVY >gi|227860823|gb|ACLH01000097.1| GENE 29 34299 - 35069 448 256 aa, chain + ## HITS:1 COG:Cgl0107 KEGG:ns NR:ns ## COG: Cgl0107 COG1349 # Protein_GI_number: 19551357 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Corynebacterium glutamicum # 1 255 1 256 260 167 40.0 2e-41 MDKEERQRRIIWAVDSGSKTVSQLQELTGASAVTIRRDLTELEEAGALTRFHGGARPAVR RGARYPLEVRRKEDPAGKRAIAAEAARLVEPGSCVLIDSGTTPTAVARNLAGMDITALAM SLYAGAALAKTPGSDVIIPGGTVNSDDLAVYGAEAVDTVMSMRFDLAIVGICACTPSVGL MSPNLTEATIKRAYFQAARRVIVVTTPEKFTRMSAHRVADFDQVDTFITTNDLSPEIAQD VVDSGANLIMVPVEDF >gi|227860823|gb|ACLH01000097.1| GENE 30 35066 - 35422 386 118 aa, chain - ## HITS:1 COG:no KEGG:cauri_2094 NR:ns ## KEGG: cauri_2094 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 118 1 118 118 218 100.0 5e-56 MSNSVNNAVHPDRQARIRGPLKFFSIAATITGIFLLILVARMILQYGVGMEMPSWATLIA QAHGVAYMVYLVSILVLGPRAMWPVGKLFTTALAGVVPFLSFWMEHKRRTEVVEQFQL >gi|227860823|gb|ACLH01000097.1| GENE 31 35419 - 35817 317 132 aa, chain - ## HITS:1 COG:Cgl2448 KEGG:ns NR:ns ## COG: Cgl2448 COG4578 # Protein_GI_number: 19553698 # Func_class: K Transcription # Function: Glucitol operon activator # Organism: Corynebacterium glutamicum # 2 125 14 150 154 118 50.0 2e-27 MKVRWWHIALIVLFVVLFLFLAYWQWTRFRSGSGTFQNLGYAFQWPLFAVFVVYAYRTAL RYENERIDAENEALERGEEPAQYEAEDVRAAKEQAVTKIDEDFLPPRPQVDVETFNAMNK QRRRRGTEEENL >gi|227860823|gb|ACLH01000097.1| GENE 32 36407 - 37018 383 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90023287|ref|YP_529114.1| ribosomal protein L33 [Saccharophagus degradans 2-40] # 1 193 1 195 200 152 43 5e-36 MVKLLVASNNAKKLKELEKILADAGIAGIELLPLSAVEAYPEPVEDGRTFADNALIKARA GVQHTGLATIADDSGLAVEELNGMPGVLSARWSGGHGDDEANNRLLLGQMSDVPAERRAA AFVSVCALVTPDGQEHVVEGRWPGSLLTAPQGENGFGYDPLFQPEGESRSAAEMSPEEKN AVSHRGRALAQLREPLAALAGQA >gi|227860823|gb|ACLH01000097.1| GENE 33 37012 - 37740 879 242 aa, chain - ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 2 241 18 257 258 378 80.0 1e-105 MTDFTRADGRALDQLRSVRITRNFTTNPAGSVLVEFGNTRVMCTASVEFGVPRFKKDSGE GWLTAEYAMLPSATHERMPRESMKGKVKGRTHEISRLVGRSLRAAVDLSELGENTIQLDC DVLQADGGTRTASITGAYVALADAIAYLKEEGVVPGEPLLDPIAAVSVGIIDGHVCLDLP YEEDSRAEVDLNVVMQEGGDFVEIQGTGEHGLFGRAELNDMLDVAQAGCAQLIDAQKAAL GW >gi|227860823|gb|ACLH01000097.1| GENE 34 37763 - 38530 560 255 aa, chain - ## HITS:1 COG:Cgl2458 KEGG:ns NR:ns ## COG: Cgl2458 COG1234 # Protein_GI_number: 19553708 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Corynebacterium glutamicum # 1 255 1 255 255 328 64.0 5e-90 MKLTILGCSGSVPTVGNPASGYLLSFPSAPSIIMDLGPGTLARLQELQDPCDAHVALTHL HADHCLDFPSLMVWRRFHPTAPAASRNFCLGPASTETHLGRLSSDAPDGVDDMSDTFAFS PWVDRERQLVDDVYITPFRTVHPVETYALRVEHSKTGATLCYSADSAYTPALVEAAQGVD AFLCEAAWGETSEDKAPDMHMSGAEAGRLAREAGVKKLVLVHLQPWGDAAATYAAAAREF DGEIVVGAAGMELEF >gi|227860823|gb|ACLH01000097.1| GENE 35 38598 - 39374 821 258 aa, chain - ## HITS:1 COG:Cgl2459 KEGG:ns NR:ns ## COG: Cgl2459 COG0796 # Protein_GI_number: 19553709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Corynebacterium glutamicum # 1 256 17 274 284 369 73.0 1e-102 MPDATSPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIA DELVERGCKMLVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTE GTINSGAYQDLFAVNPNVECEAVACPDFVNFVERGITAGRQILGVAEGYLAPLQSAGVDT LVLGCTHYPLLTGVIQLAIGDNVTLVSSAEETTKDVLRILTNTDLLAPAGQAPTRSFECT GDHAAFERLATRFLGPKI >gi|227860823|gb|ACLH01000097.1| GENE 36 39374 - 40096 785 240 aa, chain - ## HITS:1 COG:Cgl2462 KEGG:ns NR:ns ## COG: Cgl2462 COG0705 # Protein_GI_number: 19553712 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Corynebacterium glutamicum # 1 227 1 228 249 202 50.0 5e-52 MTTSGPFGQQHSHEPNPFQPRPASPGAGQQPVLNTGDSKNYTRTGRLKTAASLTVGFLAV EWIIHIINFLFFGSELGQYGIRPLDFNGIWGIFTAPLLHANFEHLIGNSLPGAVFCFLIG LSGRKAWWEVTIIVVLIAGIGTWLLGGPGTSHIGASGMVYGWLAYLIVRGIFNRSLGQFL VGVGLGFAYSGLIWGVLPIYEGVSWQGHLFGAIGGIVAGMVITSDDPIKKVKSEPQGVVR >gi|227860823|gb|ACLH01000097.1| GENE 37 40161 - 40667 588 168 aa, chain - ## HITS:1 COG:no KEGG:cauri_2101 NR:ns ## KEGG: cauri_2101 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 168 11 178 178 313 100.0 1e-84 MRGAKYTTVFEPMEREVLGDLTATVSEAIIARAQSAPKDELADMLDMPTGHTEAPEDPSL ARLFPDFTKAGDEEFDGDNALMRSLHENDIARTKLENLQVINTALGPTGGVEVAISEEEA HAFLAGLNDLRLFIAAGDVPQDAPGADRDTLVEWLAFCQDSLLNVIMD >gi|227860823|gb|ACLH01000097.1| GENE 38 40702 - 41037 389 111 aa, chain - ## HITS:1 COG:Cgl2465 KEGG:ns NR:ns ## COG: Cgl2465 COG2127 # Protein_GI_number: 19553715 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 14 111 29 124 124 149 76.0 1e-36 MKAHKETSAGVVMSSPMATPELDEAIEVDVATSENLPWMCIVWDDPVNLMSYVSYVFQTV LGYDKKRANELMMQVHTEGKAAVSSGERDKVEADVKKLQVAGLWATMQQAG >gi|227860823|gb|ACLH01000097.1| GENE 39 41126 - 41704 492 192 aa, chain + ## HITS:1 COG:no KEGG:cauri_2103 NR:ns ## KEGG: cauri_2103 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 192 1 192 192 351 100.0 9e-96 MNSFTLPPAVTDILAGRRPAKEDVVLLLQRILTVLVLGGTLITAVISLTTPSEDGSSQEP ETPAPAACDYELPDGPVQDQLATIQQDLVVAINRWRKEDGQAPLVPWIERQTAAREKAEC NAVTKTEEPSEENVQMVQDHLPLEEASGFQFMERIRKSGDHVAALRDRRMTTAAVGVAYN DGEVYVVIQLEE >gi|227860823|gb|ACLH01000097.1| GENE 40 41836 - 43098 1619 420 aa, chain + ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 1 418 25 442 446 619 76.0 1e-177 MLEAALRDGSAHRQVACEVFARRLPNERRYGVVAGTERVLRAVRDFRFTAQQLAEMDFLD AETKEYLANYRFSGHIDGYREGELYFPNSPLLTVRGTFGECLILETVILSIMNSDSAVAS AASRMVVAADGRPIIEMGSRRTHEYAAVTAARAAYLAGFQATSNLEAGYRYGIPVSGTAA HAWTLAHVNEDGTPNEEAAFRGQIETLGVDTTLLVDTYDITKGVETAVRVAGPELGGVRI DSGDLAAVTRRVRKQLDDLGNHNTKIVVSSDLDEFAIAGLRGDPVDVYGVGTSVVTGSGA PTASMVYKVVEVDGHPVAKRSSSKKSQGGAKRSLRTYRSSGVAVEELVLPFSAEDPDTGT LRTREMTVPLMRDGEILDNLPTLEESREYLAQAITTLPWEGLALTRDEPAVPTRFVGFGS >gi|227860823|gb|ACLH01000097.1| GENE 41 43135 - 45096 1867 653 aa, chain + ## HITS:1 COG:Cgl2468 KEGG:ns NR:ns ## COG: Cgl2468 COG1199 # Protein_GI_number: 19553718 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Corynebacterium glutamicum # 1 650 15 663 665 857 67.0 0 MHDTTVDLLDAAVSSLGGARRAGQVRMAEAVTTALEKERHLAVQAGTGTGKSLAYLVPAF RHAQGTGHTVIVSTATLALQRQLVERDLPRLAEALEPHLEKKPTFAIMKGRSNYVCLNKV SRAAELEDEDALLDEDSVSHLGRHVQRVYEWAEDTETGDREDLEPGVPDLAWRQVSVTSN ECLGATRCPHGEDCFAELARRRAADVDIVVTNHALLAIDAVADINILPEHDVVIIDEAHE LDGRITSVSTAEITGRALKMAASRAKSLGANGKDQRLAEQANELSQLLGEFAPGRWTDLP EEAKQQLMGLADTLADCRETIARAPEGEQSQDPEKSAERQNLANHLASLVEAIARILDVF ATGDPAAHADVVWLERDERTLNDTLAVAPLSIAGMLHEKLFGEQTVVLTSATLALGGRFD AMAAQWGLPKGTWDSLDVGYPFDPARSGILYTASHLPQPGRDGLSPETLKEIRELIMAAG GRTLGLFSSRRAAQQAAEELKPTLPFDIYLQGEDSIGALVDKFTKNENSCLFGTLTLWQG VDVPGPACSLVLIDRIPFPRPDNPLMQARTEAAKAAGRNGFMEVSATHAALLMAQGAGRL LRSANDRGVVAVLDSRLETKRYGSYLRASMPQMWPTSDPEVVRGALKRLVEAR >gi|227860823|gb|ACLH01000097.1| GENE 42 45093 - 45818 568 241 aa, chain - ## HITS:1 COG:Cgl2470 KEGG:ns NR:ns ## COG: Cgl2470 COG1990 # Protein_GI_number: 19553720 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 61 238 1 181 182 192 62.0 6e-49 MNNLREAHRRLTVACSERSWRDDPEDPEKPETVQAMQIALNLPKQDPPARTEVLEAAARG VVKLCLDDKAGQDGAFAEALGQWYGHRIRKVARRARNKAWRDVQALPGVTVEDRARVFLP SAVQDVHPLVAKLQIGHTDLPKDEPGPALGDAPVIYIDASLAMSAGKAAAQVGHGSMLLA AAMSAEDVEDWAAQDFALSVREITHEEFAVACARPGAVVVRDAGFTEVAPDSATVCALRR P >gi|227860823|gb|ACLH01000097.1| GENE 43 45811 - 46995 1274 394 aa, chain - ## HITS:1 COG:Cgl2471_2 KEGG:ns NR:ns ## COG: Cgl2471_2 COG0560 # Protein_GI_number: 19553721 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Corynebacterium glutamicum # 177 391 1 215 233 314 81.0 2e-85 MDNHSEQVFAVVTASGPDKPGVSAAFFRVLSSHNVELVDAEQAIFSGRISLSAYIRVQAS RLEALEQGLRNTLSIYAQSINVDLREEEATSRPRSTHVVVVLGRQLNASHMSAIAKELAN LNVNIDRIRGLSTYPLNGLELYITIEGASDPVRAMLARLATEQGVDIAIERSGLQRRSKR LICFDCDSTLITGEVIEMLAAHAGKEAEVAAVTERAMRGELDFEESLRERVSALAGLPES VIKETANDIRLTPGVRTTIRTLKRMGYRVAVVSGGFIQVLEDLAQELDLDYVRANTLEIE DGKLTGRVIGDVVDRKAKEMFLREFAADSGLSMLQTVAVGDGANDIDMISAAGLGIAFNA KPALREVADTSVNHPYMDEILQILGIPMEEVASE >gi|227860823|gb|ACLH01000097.1| GENE 44 47108 - 48799 2430 563 aa, chain - ## HITS:1 COG:Cgl2472 KEGG:ns NR:ns ## COG: Cgl2472 COG0843 # Protein_GI_number: 19553722 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Corynebacterium glutamicum # 32 563 1 532 553 870 84.0 0 MTAVAPRLDDYVAPTRPEPTGNAKTGSKAWTMLTTTDHKQLGIMYMIMSFSFFFLGGFMA LLLRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLFATPVVWAFGNYVLPLQIGAPDVAFP RLNAFGFWITLTGGIVMLAGFLTPGGAADFGWTMYMPLADSVHTPGIGADMWIVGVGATG VGTIASAINMITTVLTLRAPGMTMFRLPVFTWAIFTASVIVLMIFPLLTAAALGVLYDRK LGGHIFDSANGGGILWQHLFWFFGHPEVYVLALPFFGIISEVVPVFARKPVFGYIGLVFA LLAIGALSMAVWAHHMFVTGAILLPFFSFMTFLIAVPTGVKFFNWVGTMWKGHITWDTSM IFAMGFLATFLFGGMTGIMLASPALDFHLAESYFLIAHFHYTLFGTVVFSAFAGLYFWFP KMTGRMLDERLGKIHFWLTFIGFHGTFLIQHWVGNMGMPRRYADYLESDGFTVFNQISTI FSFVLGASVIPLVWNVFKSWRYGEIVTVDDPWGYGNSLEWATSCPPPRHNFVSLPRIRSE RPAFELHYPHMVKRMREEAHSGH >gi|227860823|gb|ACLH01000097.1| GENE 45 49140 - 50129 1336 329 aa, chain - ## HITS:1 COG:Cgl2473 KEGG:ns NR:ns ## COG: Cgl2473 COG0208 # Protein_GI_number: 19553723 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Corynebacterium glutamicum # 5 329 10 334 334 527 81.0 1e-149 MSHEYDDYIASHEAPVKAINWNTIPDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWKTLTE KEQETTMRVFAGLTLLDTIQGTVGAVSLLPDAVTPHEEAVYTNIAFMESVHAKSYSNIFM TLASTPMINDAFRWSEENENLQRKAKIVMSYYQGDNPLKKKVASTLLESFLFYSGFFLPM HFSSRAKLTNTADIIRLIIRDEAVHGYYIGYKFQQGYQKLSEPEQEEMKGYAFDLLYDLY ENEIDYTEDLYDELGWTEDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNA DENHDFFSGSGSSYVIGKAEETTDDDWDF >gi|227860823|gb|ACLH01000097.1| GENE 46 50234 - 50944 773 236 aa, chain + ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 1 233 9 244 250 181 46.0 9e-46 MTPSFDGMTDSSAPLLSTVLDALGTDIVSGTLAAGDRFTLTDLCSRFGISRTVAREAMRA LEHLGMVSSSRRVGITVLPISEWAVYDPAIISWRLGSEKSRDSQRTSLNDLRLAIEPVAA GLAAQHASPEDKEEILELAHRLQVTPTRRVGEHLATDLRFHAMVLHASGNEMFTALSPYL LSMVRGRSLYGSRKRNPTAGTAQLHLDLAEAIHRGDSPEAEKIARAILIEARANKD >gi|227860823|gb|ACLH01000097.1| GENE 47 50941 - 53112 2944 723 aa, chain - ## HITS:1 COG:Cgl2478 KEGG:ns NR:ns ## COG: Cgl2478 COG0209 # Protein_GI_number: 19553728 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Corynebacterium glutamicum # 20 723 13 715 715 1206 82.0 0 MNVVTTQLGKTVAEPVKPEEQLDYHALNALLNLYDENGKIQFDKDREAANQFFLQHVNQN TVYFHDLEEKMRYLVDNKYYEPELLEQYDFDFIKSLFKRAYAFKFRFKTFLGAYKYYTSY TLKTFDGRRYLERFEDRVSMTALFLADGDTKVAEHLVDEIMTGRFQPATPTFLNAGKAQR GELVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNIRESGAPIKHIENQSSGVI PVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIMNFLDTKRENADEKIRIKTLSLGIVI PDITFELAKNNDDMYLFSPYDVERVYGKAFGDISVTEHYEEMVEDPRIRKKKINARHFFQ TVAELQFESGYPYIMFEDTVNRANPVKTGRINMSNLCSEILQVNSPSELNEDLTYKTLGS DISCNLGSLNIAATMDSPDFALTVETAIRGLTAVSDKTAINSVPSVRKGNDDSHAIGLGQ MNLHGYLGREHIEYGSEEGLDFTNAYFAAIMYAALRASNKLARERGEYFSEFPESDYASG EFFDRYDPADFAPRTEKVKELFAKSSIHTPSAEEWAQLKVDVAKHGIYNRNLQAVPPTGS ISYINNSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNDNLEYFKDSYEIGYEKIIDTYA EATKYVDQGLSLTLFFKDTATTRDINRAQIYAWRKGIKTLYYIRLRQMALEGTEVEGCVS CML >gi|227860823|gb|ACLH01000097.1| GENE 48 53166 - 53591 404 141 aa, chain - ## HITS:1 COG:Cgl2479 KEGG:ns NR:ns ## COG: Cgl2479 COG1780 # Protein_GI_number: 19553729 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Corynebacterium glutamicum # 1 139 1 139 148 225 76.0 2e-59 MLVVYFSSATENTHRFVEKLGLPSARIPLRLSDEPLTVNEPYVLICPTYGGGASMSRQNT RPVPKQVIRFLNDEHNRSFIRAVVAGGNSNFGSDFGKAGDVIAAKCKVPYVYRFELLGTE EDVTICREGLLANAAALGLAA >gi|227860823|gb|ACLH01000097.1| GENE 49 53601 - 53840 281 79 aa, chain - ## HITS:1 COG:Cgl2480 KEGG:ns NR:ns ## COG: Cgl2480 COG0695 # Protein_GI_number: 19553730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Corynebacterium glutamicum # 1 77 1 77 77 119 72.0 2e-27 MSITLYTKPACVQCNATKKALDRAGLDYETVDITLDDDARDYVMALGYVQAPVVEAHGEH WSGFRPDRIKALSVMAASA >gi|227860823|gb|ACLH01000097.1| GENE 50 53776 - 53967 119 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLERRVCTAVQSFNAGLLSALLVSNSTVTPRVVPKEAEGTSHEHHPLYQARLRPVQRHQ KGS >gi|227860823|gb|ACLH01000097.1| GENE 51 54315 - 54437 202 40 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227490822|ref|ZP_03921138.1| 50S ribosomal protein L36 [Corynebacterium pseudogenitalium ATCC 33035] # 1 40 1 40 40 82 100 5e-15 MKVRKSLRSLKKKPGAQVIRRHGKVFVINKKDPRFKARQG >gi|227860823|gb|ACLH01000097.1| GENE 52 54561 - 55868 1115 435 aa, chain - ## HITS:1 COG:BS_ydjK KEGG:ns NR:ns ## COG: BS_ydjK COG0477 # Protein_GI_number: 16077690 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 6 430 17 457 473 279 37.0 6e-75 MMVAGVAALGGLLFGYDTGVMSGALLFVGPEFGMSAHEEGLVTSMLLVGAAVGALAAGRV ASMIGRRRTLIAGGLIFVAGSVWCALANSAAELATARTFLGVAVGAVSIVSPMYISEITP AAVRGRMVSLNTLMIVVGQLLAYGVNSLLAASGSWHWMLGLAAVPGAALALGMVFLPDTP AWLAAQGRTGQAAAVSARVGARGAELEHSARPSTGEWQALRRHRWMRWAIALAMLMGLTQ QITGVNAIVYFAPTMMNQVGISTTNSVYTSMVIGVVSVAACLVGMRVIDRLGRRRLLLAG LSGNVVSLVVLAVAYHFAHDSTPLAMLALACMAAFIAFQQAAVSPATWLLMSEIVPPEVR GLGMGIAGLALWVSNWAVAQFFLPVVEWLGGSLGFGIFAGLGLVAVGYTRALVPETAGKS LEDVAEQFRSRYSES >gi|227860823|gb|ACLH01000097.1| GENE 53 55758 - 56741 860 327 aa, chain + ## HITS:1 COG:Cgl2482 KEGG:ns NR:ns ## COG: Cgl2482 COG0171 # Protein_GI_number: 19553732 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Corynebacterium glutamicum # 62 324 2 271 277 335 65.0 8e-92 MGGHTEFRPYEEESTRHHSGVVSKEQAAQGGYACDHHDVSIFVHEFLLSQAATMGVMSHE STDLQNDIIKALGVKPRIDPAEEVERRVAFLVDYLRTTGAKGFVLGISGGQDSTLAGRLA QLAVARVDGAHFWAVRLPHGVQADEDDAQIALDFIEPDYSLTVNIAEATAALDGAVANAL HQDSLGDFNRGNLKARLRMSAQYALAGEVGALVIGTDHAAENVTAFFTKWGDGAADVLPL AGLNKRQGARLLKHLGAPDSTWKKVPTADLEDDRPLLSDEEALGVTYAHIDDYLEGRAVP DDARARIETLWRRGAHKRTMPPGPTSA Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:18:22 2011 Seq name: gi|227860822|gb|ACLH01000098.1| Corynebacterium aurimucosum ATCC 700975 contig00179, whole genome shotgun sequence Length of sequence - 14725 bp Number of predicted genes - 17, with homology - 16 Number of transcription units - 10, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 55 - 92 -0.6 1 1 Tu 1 . - CDS 234 - 968 202 ## COG3001 Fructosamine-3-kinase - Prom 1085 - 1144 5.4 - TRNA 1003 - 1078 92.3 # Ala GGC 0 0 - TRNA 1101 - 1173 84.0 # Ala GGC 0 0 - Term 1088 - 1134 2.4 2 2 Op 1 . - CDS 1263 - 2018 1084 ## COG1651 Protein-disulfide isomerase 3 2 Op 2 . - CDS 2078 - 2545 517 ## cauri_2120 hypothetical protein 4 2 Op 3 . - CDS 2563 - 2754 224 ## cauri_2121 hypothetical protein 5 2 Op 4 . - CDS 2791 - 3024 360 ## cauri_2122 hypothetical protein 6 2 Op 5 . - CDS 3036 - 4652 2161 ## COG0033 Phosphoglucomutase + Prom 4527 - 4586 1.9 7 3 Op 1 . + CDS 4736 - 5053 371 ## cauri_2124 camphor resistance protein CrcB 8 3 Op 2 . + CDS 5050 - 5409 387 ## COG0239 Integral membrane protein possibly involved in chromosome condensation - Term 5295 - 5330 6.1 9 4 Op 1 36/0.000 - CDS 5446 - 7992 162 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 10 4 Op 2 . - CDS 7996 - 8736 299 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 11 5 Op 1 4/0.000 + CDS 8830 - 9687 557 ## COG1562 Phytoene/squalene synthetase 12 5 Op 2 . + CDS 9691 - 11205 1178 ## COG1233 Phytoene dehydrogenase and related proteins + Term 11408 - 11451 3.4 13 6 Tu 1 . - CDS 11202 - 12104 491 ## cauri_2130 hypothetical protein 14 7 Tu 1 . + CDS 12191 - 13555 1214 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 15 8 Tu 1 . + CDS 13663 - 13881 222 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Prom 14063 - 14122 2.3 16 9 Tu 1 . + CDS 14157 - 14396 187 ## cauri_2133 hypothetical protein + Term 14563 - 14611 0.1 17 10 Tu 1 . - CDS 14397 - 14594 77 ## Predicted protein(s) >gi|227860822|gb|ACLH01000098.1| GENE 1 234 - 968 202 244 aa, chain - ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 5 243 1 248 249 202 50.0 4e-52 MLGSMDVFTKSVARADQAEAEAAGLRWLAAARKDVVVEVAGLTDSTISTRRVAQARPSAA AARAFGEALRQVHQAGAPAFGAPPEGWEGANFIGRVEQPCEPREAWGEFYAEQRVVPFIE GLPEGLRDSVYVAAEAIAAVDWDVEPARIHGDLWAGNVLFQEDTAVMIDPAAHGGHPWTD LAMLELFGTPYYDEILRGYGVGEEYRKWVPMHQLHPLAVHAMTHGPAYYAPLEQAARATL EALR >gi|227860822|gb|ACLH01000098.1| GENE 2 1263 - 2018 1084 251 aa, chain - ## HITS:1 COG:Cgl2488 KEGG:ns NR:ns ## COG: Cgl2488 COG1651 # Protein_GI_number: 19553738 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Corynebacterium glutamicum # 4 248 28 261 264 163 42.0 3e-40 MSTVKDPNSKSNSGFVWGLAVLLVIIAVVIGYIVYQGRGAQTDALGDYAAEDVSMEISLA DNAVTLKSADAAKDATEVDLYEDYSCPHCGDLAKETDEQMKDAIDAGELVVHVRTLNFLD GSPNGLESIKSNTGHSSKAAAAMEQVAKTGDATLYWNLRKYLMENQSKVYNKWEMEDFAA AAKELGADDATVKAIEEAPVGEGNPLVTSNYEKLEKETGSVSSPRIIKDGKDIPEDDKTS IMEWVNIVTEK >gi|227860822|gb|ACLH01000098.1| GENE 3 2078 - 2545 517 155 aa, chain - ## HITS:1 COG:no KEGG:cauri_2120 NR:ns ## KEGG: cauri_2120 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 155 1 155 155 275 100.0 4e-73 MTKTKISAPLVLDIISAFARFYMAYVWIKAGASKLSDQLAVSQSIKAYEIFTPEWSHYLS YLIGPLEVCGGLLLLLGLFLRQSAWVGQIVLVLFMIGIAQAWARGLGIDCGCFSVSPDED AQVMNYMMTLLRDVFYSVLMVWTIKRPFTKFALHP >gi|227860822|gb|ACLH01000098.1| GENE 4 2563 - 2754 224 63 aa, chain - ## HITS:1 COG:no KEGG:cauri_2121 NR:ns ## KEGG: cauri_2121 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 63 128 100.0 7e-29 MFMVGIAQAWARGLVIDCGCFGYDPNDVNQGMNYALTLLRDAFFFALTVWTIRRPYRRYA LHP >gi|227860822|gb|ACLH01000098.1| GENE 5 2791 - 3024 360 77 aa, chain - ## HITS:1 COG:no KEGG:cauri_2122 NR:ns ## KEGG: cauri_2122 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 63 1 63 77 109 100.0 4e-23 MTTAQRTSVLDLASALARFGMAAVWIIAGIQKLDARMEMTQAIKAYGIFTPEWSGYLAYL IGPLELMGGVLLLLGLF >gi|227860822|gb|ACLH01000098.1| GENE 6 3036 - 4652 2161 538 aa, chain - ## HITS:1 COG:Cgl2489 KEGG:ns NR:ns ## COG: Cgl2489 COG0033 # Protein_GI_number: 19553739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Corynebacterium glutamicum # 1 537 1 553 554 843 79.0 0 MAHERAGQLAQPSDLIDIAELVTAYYTRTPDADNPDQQVSFGTSGHRGSALDTAFNEAHI LAITQAIVDYRAERGTTGAIFIGRDTHALSEPAMVSALEVLLANDLEVRVDDRGRYTPTP AVSHAILTNPGTDGIVITPSHNPPRDGGFKYNPPTGGPADTDATDWIAAKANDYLRAGLD GVKRVPVDGVLDARCVKHNYLDSYVSDLANVVDMAAIKDAGVRIGADPMGGASVDYWAAI AEHYELNMTVVNPDVDGTFRFMTLDTDGKIRMDCSSPDAMASLVDNRSKYDLATGNDADA DRHGIVTPDAGLMNPNHYLAVAIEYLFSHRPQWGNAGVGKTLVSSSMIDRVVASLGRELV EVPVGFKWFVPGLVDGTLGFGGEESAGASFLRFDGTVWSTDKDGIILDLLAAEILAVTDK TPSQRYAELAEEYGAPAYARTDAPATREQKAILKKLSPEQVTATELAGEEIVAKLTEAPG NGAAIGGLKVRTENAWFAARPSGTEDKYKIYAESFRGEEHLKQVQEEAQALVSQVLGA >gi|227860822|gb|ACLH01000098.1| GENE 7 4736 - 5053 371 105 aa, chain + ## HITS:1 COG:no KEGG:cauri_2124 NR:ns ## KEGG: cauri_2124 # Name: ccrB # Def: camphor resistance protein CrcB # Organism: C.aurimucosum # Pathway: not_defined # 1 105 1 105 105 152 100.0 5e-36 MPQILLVGCGTALGALVRFVLSSLLGGGELPLLLINVLGSAVMGYAKPPAFWGTGFLGGF TSFATFAFLTSSFGPAQAGAYVLATVVGCTGAYLMGDRLQDRRHA >gi|227860822|gb|ACLH01000098.1| GENE 8 5050 - 5409 387 119 aa, chain + ## HITS:1 COG:Cgl2491 KEGG:ns NR:ns ## COG: Cgl2491 COG0239 # Protein_GI_number: 19553741 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Corynebacterium glutamicum # 11 111 9 105 108 60 40.0 7e-10 MILSILAVLAGGFVGGCGRYLLTRVLPSPTCTFAANLVGAAVAGVAYGYATHAHAPEYFL PLLAAGLAGGLSTWSTLARELGEMIKAKRWWRLARYLFWTIGLGIVVAWRGAWVGSLLA >gi|227860822|gb|ACLH01000098.1| GENE 9 5446 - 7992 162 848 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 702 846 270 410 413 67 25 7e-11 MATKNTMRTVSVRNILAHKLRLALTLLAVVLGTAFISGSFMFTNSLSSTFDSAVSTAFTG VDAAVSQKEGGPNLDQKMRDDIAADPDVRAVNMQSSQTVVVANKDAEAFQTGGGTSSVQP YYPEDQSVGEPATLVEGSEPNGTGEVLINDSAAEEFGINVGDTLLVVHPDQRDEVNVVGV VKPAVDQGPSLTLLMGHEAFVERYGNSEQLKVAAAEGVSADELVDHLNDTFEVKAESGQK LADEISDQISSALKFVNYFLIAFGLIALLVGTFIIANTFSMIVAQRTKEFALLRALGASR GQITRSVVTEAFIVGLVGSAVGVVAGMGLVALIKAVFEAKGMPMGGGLGLSVSAVVVPLL LGAVVTIISAWAPARRAGAVKPVEAMRTTESAAGSSLLVRSVLGGLLLVVGIIFALVGVF IDASTGIRASLVGLGALNLILGFFLAGPAISLLIVPGIGRVVGAPFGAVGKLASTNSARN PRRTAATAFALMLGVALVTSIGMLGATMKASVADAVEQDARADFLMSGPTSGNFPTPNET VQRARDTEGVGQVVAMSTAPLQVDGQASMNYGPEMMVSQVIDGNADDMLNLTLVDGALNT GEEPGFIADSVLAEKQGWEVGQSYELAGPDPSRTAQVKLLGTYEPFQMLPGLAVSQSAVE EVINPNSLDVTVVSVNAEEGYDKEKLRANLEKSVKDLVVVQVRTSEEYAGEAAGMIDQML TILYALLALAVVIAVLGIVNTLTLGVIERRQEIGMLRAVGTQRRQIRTMITVESVQIALF GALMGILMGLGMGWSFISVLSDEGLDSATVPWMMLAVMFVGSGIVGVLAALWPAQRAAKT PPLDAIAD >gi|227860822|gb|ACLH01000098.1| GENE 10 7996 - 8736 299 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 29 206 21 199 223 119 38 1e-26 MTTPTMTAAARAVDLFKQYGQGDTAVTALDHVDVEFARNTFTAIMGPSGSGKSTLMHTMA GLDSATSGSAFIGDTDMSQLSDKDITALRRDRLGFIFQSFNLVPTLTAAENITLPTDIAG NKVDKEWFDEVTSRLGLSERLNHRPAELSGGQQQRVACARALVSRPEIIFGDEPTGNLDS NSSAEVLDILRTAVDKDGQTVVIVTHDAKAASYADRVVFLADGRLVNELTNPTMESIHAV MAEIEG >gi|227860822|gb|ACLH01000098.1| GENE 11 8830 - 9687 557 285 aa, chain + ## HITS:1 COG:Cgl0607 KEGG:ns NR:ns ## COG: Cgl0607 COG1562 # Protein_GI_number: 19551857 # Func_class: I Lipid transport and metabolism # Function: Phytoene/squalene synthetase # Organism: Corynebacterium glutamicum # 6 276 12 290 304 244 51.0 1e-64 MRASLSALEHYDRCAEAAAAQIMRHYSTSFSLATRLLQPRVRVDIRNLYAMVRTADEIVD AGLDPHDAAALLDAYETTVRNAPSQRFHADPVVHAYALSARRCGFQDEHIAEFFASMRCD LTRTSHTADSFKTYVRGSAEVIGLLCLDTFYAGAPRPTGVEEGAERLGAAFQKINFLRDL HEDSTVLGRAYFPTLREPDKLDEETKAAIIADIREDLVHARTAMDLLPLSSRVGVAAAAA LFTELTDLLEATPAHEIMTTRVSVPTARKAVLISRAAAHAARKKG >gi|227860822|gb|ACLH01000098.1| GENE 12 9691 - 11205 1178 504 aa, chain + ## HITS:1 COG:Cgl0606 KEGG:ns NR:ns ## COG: Cgl0606 COG1233 # Protein_GI_number: 19551856 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phytoene dehydrogenase and related proteins # Organism: Corynebacterium glutamicum # 2 500 11 521 548 566 57.0 1e-161 MSKHVVVIGAGIAGLATAALLLREGMRVTVVDKQRSVGGRAGRLAVDGFRFDTGPSWYLM PEAFDEFFRACGTSTECELDLVDLSPAYRVINEDGAALDIETGVDNVAELFESLEPGSGD KVRAYLARASDVYAIALRNFLYTTFSHPTQLLSKDVLTRLGTLALLLTRSLDTLVAAQFK DYRLRQVLTYPAVFLSTEPKAAPALYSLMSHTDLVEGVRYPLGGFAAVVDAIARQAAGAT FELGTAVVAINHAHGRATGVTLDDGRTIPADAIVSAADLRHTETALLPKELQTYPERYFA HRDPGLGTVLVFLGVKGELPQLAHHTLLFSTDWTPDFKAVYHGPEPLRPLGASESIYVSK TSATDPGVAPEGHENLFILVPVPAEESYGHGDAYGAAESPRVGAIARAAVAQLGAWLGIE DLGDRVVVKRTLGPADFSEQYNSWSGGAVGPAHTLRQSAFFRGRNQSRKLPNLYYAGATT VPGVGVPMCLISAHNVLTRMREQY >gi|227860822|gb|ACLH01000098.1| GENE 13 11202 - 12104 491 300 aa, chain - ## HITS:1 COG:no KEGG:cauri_2130 NR:ns ## KEGG: cauri_2130 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 300 15 314 314 571 100.0 1e-161 MLSLYREFSGNDVVKTLLSFEEAEFLFVVADTPEKSVSDDPYAEDKTHIQLMSLPGVALK LLPEGELITGDIAVRYPQLFQTVAGKTLWDPREITELEPFRVFHARGSHHFHERSKEHYV DIWEILPDVADAAMEQLLARIDVPVELDSAFGPLVLDRGTNTFEGRAEELGVDISIVYEG EELLLAESTNLKRKLKAPLTVINKVLSAEFLDEAQRFAAAKALRAANRWRHDVALSEGNS LPAPELTASDVYTKLTPVAVEVPQRGNLSVEFDDGYLFGGHPVTVKVRRNGTPASLELDA >gi|227860822|gb|ACLH01000098.1| GENE 14 12191 - 13555 1214 454 aa, chain + ## HITS:1 COG:Cgl0225 KEGG:ns NR:ns ## COG: Cgl0225 COG2239 # Protein_GI_number: 19551475 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Corynebacterium glutamicum # 34 454 16 436 436 486 62.0 1e-137 MAETIEQASETVEAWLKQEDAIDPKKAPRLQELLARVPRQELIAIVERQNALRAALALRL LPREKSIAVFDALDAKHQADIIDELGNADVYEFFDELDPEDRVALLDELPAEIADRLLRS LTQTQRDVTGVILGYTKGSVGRRMSPEVPDIHPGMSMEDALYTLRDTADELETIYTVPVT RKDRRLVGVVSLRELFTAERGILIADIMKEPVYAYATADAEETVRWFLPLDMLALPIVDD SHRLVGLLTWDDATDIMEEADSEDSARSGGTEALQQPYLSTPLLKLVRSRILWLLVLAVS ALLTVQVLDSFEDTLAKAVVLSLFIPLLTGTGGNTGNQAATTVTRALALGDVRTRDLLSV MWRELRVGMLLGAVLGMAGFVLATAIYGLDIGIVIGSTLFLICSMSATVGGLMPIVAKTV GADPAVFSNPFISTFCDATGLIIYFFIAKSVLGI >gi|227860822|gb|ACLH01000098.1| GENE 15 13663 - 13881 222 72 aa, chain + ## HITS:1 COG:Cgl0791 KEGG:ns NR:ns ## COG: Cgl0791 COG0436 # Protein_GI_number: 19552041 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Corynebacterium glutamicum # 7 68 322 381 387 61 46.0 5e-10 MPLICHVVADLSFTRLNDIDFCMHLPRTKQVAAIPLAAFTDNPEPWQQKVRFAFCKHPDV IREAVRRLTTSP >gi|227860822|gb|ACLH01000098.1| GENE 16 14157 - 14396 187 79 aa, chain + ## HITS:1 COG:no KEGG:cauri_2133 NR:ns ## KEGG: cauri_2133 # Name: not_defined # Def: hypothetical protein # Organism: C.aurimucosum # Pathway: not_defined # 1 79 1 79 79 110 100.0 2e-23 MKKSLAIISATALALSATPTAIADEGGAQTSQQSSSLSPSEFGVDHPFFGVIAIPVMLSS FALSMLGIPQCGLHDTTGC >gi|227860822|gb|ACLH01000098.1| GENE 17 14397 - 14594 77 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSKVCLWNCGILASSSSRLDSNGLGTSGTPSDGEPAAPSFVWAGGFAVYDKAVPRYGIG LRSLV Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:18:45 2011 Seq name: gi|227860821|gb|ACLH01000099.1| Corynebacterium aurimucosum ATCC 700975 contig00180, whole genome shotgun sequence Length of sequence - 1958 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 17 - 1687 633 ## COG4584 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 1710 - 1956 260 ## cauri_2135 putative transposase Predicted protein(s) >gi|227860821|gb|ACLH01000099.1| GENE 1 17 - 1687 633 556 aa, chain + ## HITS:1 COG:AGl6 KEGG:ns NR:ns ## COG: AGl6 COG4584 # Protein_GI_number: 15890093 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 94 462 113 469 530 196 34.0 1e-49 MLATPQSAGVASTSTWKEPVLVANFKQIIAMCLDGASYAQITHALGCSRREVSRAKKVIN DEALTPEQFRQLPPEWFDDRFSDGRSKRSLSYDQPDFQALARKLRSTKHVTRHKLWMDYL SQPCPTDKTKYQYSQFCSGLSEFLRANDLVEVITHEPGQELYVDWAGDKVPVVDQASGDT AFKASLFVAVSPYSGLMYVTAAANEKMPSWIECHVKALNYLGKVPAVIVPDNASTATYRP KKNSTYRMVTDRYAAFADYYGITIVPTRPGRPRDKAAVERAVKIAYTKILGYFSNEVFYN LDELNEAIACRLADINSAMTRPDGTTRRMRFEQEEAPVMRDLPPTPFTEVSYKRLKVDRN WHITCDYQYYSVPFQLVGESVTVRLTPQLVSIFSGEQLVAEHTRLHGFKYRYSTNPQHAP RGDDEGHKALTRDELLAWASSFGAATHAVIAMILDRNSAAVPRGLIQARNVLANLGKKHN KATLEPACQQVVDKKLAPTMAVIKRIQTDIAHAQQHPGAPGPKTQPVAKHHPRPSTPLTG DVADAVFIRPADHYEN >gi|227860821|gb|ACLH01000099.1| GENE 2 1710 - 1956 260 82 aa, chain + ## HITS:1 COG:no KEGG:cauri_2135 NR:ns ## KEGG: cauri_2135 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 82 1 82 92 133 100.0 3e-30 MNSIDDEIVRAKMRKLRVSTFADIFYEVVNDEAYADALPEDIFLAAVEEAYTQRQQRNIA KAITQAQFRYPDASLAEITRAE Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:18:47 2011 Seq name: gi|227860820|gb|ACLH01000100.1| Corynebacterium aurimucosum ATCC 700975 contig00188, whole genome shotgun sequence Length of sequence - 545 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Sun Jul 3 05:18:48 2011 Seq name: gi|227860819|gb|ACLH01000101.1| Corynebacterium aurimucosum ATCC 700975 contig00189, whole genome shotgun sequence Length of sequence - 544 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 458 166 ## cauri_2514 putative transposase Predicted protein(s) >gi|227860819|gb|ACLH01000101.1| GENE 1 2 - 458 166 152 aa, chain - ## HITS:1 COG:no KEGG:cauri_2514 NR:ns ## KEGG: cauri_2514 # Name: not_defined # Def: putative transposase # Organism: C.aurimucosum # Pathway: not_defined # 1 152 52 203 544 318 99.0 5e-86 MTNDELDEIFVDKRSSGQGEFVPIDFDAVVKARTGRVKQTLQVLWARYTTIPAQPGQRHY SYDRFRQLVASHVDAAGLTARITHAPGHTMQVDWAGTKMCLYDPAGTPGAKVSIFVAALP YSGMLFACACIDQRQQSWLDTHRQAFDYFGGV