Prediction of potential genes in microbial genomes Time: Tue Jul 5 01:24:52 2011 Seq name: gi|333596726|gb|GL892086.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD1, whole genome shotgun sequence Length of sequence - 2357960 bp Number of predicted genes - 2199, with homology - 2145 Number of transcription units - 1174, operones - 488 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1187 1154 ## COG2081 Predicted flavoproteins - Prom 1249 - 1308 4.5 + Prom 1243 - 1302 3.3 2 2 Tu 1 . + CDS 1416 - 2915 1671 ## COG0306 Phosphate/sulphate permeases + Term 2937 - 2970 5.2 3 3 Tu 1 . - CDS 2970 - 3251 351 ## ECL_04912 universal stress protein UspB - Prom 3466 - 3525 3.3 + Prom 3410 - 3469 4.1 4 4 Tu 1 . + CDS 3589 - 4026 714 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Term 4027 - 4076 6.3 5 5 Tu 1 . - CDS 4110 - 4763 774 ## COG0500 SAM-dependent methyltransferases - Term 4803 - 4832 3.5 6 6 Tu 1 . - CDS 4867 - 6909 3058 ## COG0339 Zn-dependent oligopeptidases + Prom 6978 - 7037 2.2 7 7 Op 1 7/0.083 + CDS 7087 - 7929 1007 ## COG2961 Protein involved in catabolism of external DNA 8 7 Op 2 . + CDS 8000 - 9352 486 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 9374 - 9401 1.5 + Prom 9379 - 9438 3.7 9 8 Tu 1 . + CDS 9530 - 9811 263 ## Kvar_2463 hypothetical protein + Prom 9842 - 9901 3.5 10 9 Tu 1 . + CDS 10052 - 11701 1934 ## COG1626 Neutral trehalase + Term 11814 - 11848 4.0 11 10 Tu 1 . - CDS 11794 - 13377 1462 ## ECL_04919 putative inner membrane protein - Prom 13449 - 13508 8.5 + Prom 13428 - 13487 6.9 12 11 Op 1 . + CDS 13527 - 14060 196 ## PROTEIN SUPPORTED gi|153832774|ref|ZP_01985441.1| acetyltransferase, including N-acetylases of ribosomal protein 13 11 Op 2 . + CDS 14138 - 14476 257 ## COG3772 Phage-related lysozyme (muraminidase) - Term 14353 - 14393 -0.7 14 12 Tu 1 . - CDS 14455 - 15057 379 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 15082 - 15141 6.1 15 13 Tu 1 . - CDS 15232 - 15990 819 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 16022 - 16081 2.7 + Prom 15996 - 16055 3.3 16 14 Tu 1 . + CDS 16128 - 17009 982 ## COG0583 Transcriptional regulator 17 15 Tu 1 . + CDS 17123 - 18085 1113 ## COG1295 Predicted membrane protein + Term 18093 - 18126 5.4 + Prom 18124 - 18183 5.5 18 16 Tu 1 . + CDS 18346 - 19668 2068 ## COG0477 Permeases of the major facilitator superfamily - Term 19641 - 19686 4.1 19 17 Op 1 4/0.364 - CDS 19729 - 21771 2343 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 20 17 Op 2 . - CDS 21837 - 22610 911 ## COG2200 FOG: EAL domain - Prom 22717 - 22776 5.0 + Prom 22665 - 22724 3.7 21 18 Tu 1 . + CDS 22841 - 23770 1208 ## COG0524 Sugar kinases, ribokinase family 22 19 Tu 1 . - CDS 23833 - 25323 1721 ## COG0612 Predicted Zn-dependent peptidases - Prom 25438 - 25497 6.3 - Term 25344 - 25379 -0.0 23 20 Tu 1 . - CDS 25546 - 26832 1709 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 26886 - 26945 3.4 - Term 26949 - 26986 2.1 24 21 Tu 1 . - CDS 26992 - 28965 2074 ## COG2200 FOG: EAL domain - Prom 29052 - 29111 6.8 25 22 Op 1 4/0.364 - CDS 29119 - 32550 3588 ## COG0457 FOG: TPR repeat 26 22 Op 2 . - CDS 32583 - 33689 818 ## COG3405 Endoglucanase Y 27 22 Op 3 . - CDS 33696 - 36119 2665 ## ECL_04937 cellulose synthase regulator protein 28 22 Op 4 1/0.716 - CDS 36130 - 38745 2639 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 29 22 Op 5 . - CDS 38742 - 39494 840 ## COG1192 ATPases involved in chromosome partitioning 30 22 Op 6 . - CDS 39506 - 39694 59 ## Ent638_3932 putative cytoplasmic protein - Prom 39763 - 39822 3.8 + Prom 39668 - 39727 5.7 31 23 Op 1 . + CDS 39923 - 41431 874 ## ECL_04941 putative cytoplasmic protein 32 23 Op 2 . + CDS 41428 - 41622 128 ## ECL_04943 putative inner membrane protein 33 23 Op 3 . + CDS 41615 - 43294 1534 ## ECL_04944 hypothetical protein 34 24 Op 1 6/0.121 - CDS 43331 - 44293 786 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 35 24 Op 2 1/0.716 - CDS 44290 - 45318 877 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 45414 - 45473 80.4 36 25 Op 1 6/0.121 - CDS 48579 - 49124 500 ## COG4635 Flavodoxin 37 25 Op 2 4/0.364 - CDS 49135 - 50586 1666 ## COG0168 Trk-type K+ transport systems, membrane components 38 25 Op 3 2/0.587 - CDS 50629 - 51243 323 ## COG1739 Uncharacterized conserved protein 39 25 Op 4 . - CDS 51243 - 52574 1748 ## COG0006 Xaa-Pro aminopeptidase - Prom 52683 - 52742 3.1 + Prom 52525 - 52584 4.1 40 26 Op 1 20/0.000 + CDS 52765 - 54954 3054 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 41 26 Op 2 . + CDS 54964 - 56127 1374 ## COG0183 Acetyl-CoA acetyltransferase + Term 56302 - 56334 2.1 42 27 Op 1 19/0.000 - CDS 56330 - 58399 3034 ## COG0751 Glycyl-tRNA synthetase, beta subunit 43 27 Op 2 . - CDS 58409 - 59320 1233 ## COG0752 Glycyl-tRNA synthetase, alpha subunit - Prom 59357 - 59416 5.5 - Term 59419 - 59466 3.1 44 28 Tu 1 . - CDS 59481 - 59786 276 ## ECL_00206 hypothetical protein - Prom 59947 - 60006 3.6 + Prom 59768 - 59827 6.9 45 29 Tu 1 . + CDS 59971 - 60966 1018 ## COG3274 Uncharacterized protein conserved in bacteria + Term 60986 - 61026 -0.8 46 30 Op 1 11/0.017 - CDS 61019 - 62473 1217 ## COG1070 Sugar (pentulose and hexulose) kinases - Term 62484 - 62523 1.0 47 30 Op 2 . - CDS 62534 - 63919 1814 ## COG2115 Xylose isomerase - Prom 64027 - 64086 2.6 + Prom 64012 - 64071 6.5 48 31 Op 1 11/0.017 + CDS 64227 - 65219 1034 ## COG4213 ABC-type xylose transport system, periplasmic component + Term 65239 - 65272 1.0 49 31 Op 2 11/0.017 + CDS 65292 - 66833 220 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 50 31 Op 3 4/0.364 + CDS 66811 - 67992 1471 ## COG4214 ABC-type xylose transport system, permease component 51 31 Op 4 . + CDS 68027 - 69205 1173 ## COG1609 Transcriptional regulators + Term 69212 - 69248 7.3 - Term 69203 - 69233 4.3 52 32 Tu 1 . - CDS 69241 - 69813 627 ## COG2992 Uncharacterized FlgJ-related protein 53 33 Tu 1 . + CDS 70380 - 72410 2305 ## COG0366 Glycosidases + Term 72482 - 72542 2.1 + Prom 72428 - 72487 49.8 54 34 Tu 1 . + CDS 72716 - 73969 1467 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase 55 35 Op 1 1/0.716 - CDS 73977 - 74432 104 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 74465 - 74524 2.9 56 35 Op 2 . - CDS 74526 - 75344 261 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 75405 - 75464 5.1 + Prom 75422 - 75481 6.4 57 36 Op 1 2/0.587 + CDS 75569 - 76969 1516 ## COG2211 Na+/melibiose symporter and related transporters 58 36 Op 2 . + CDS 76980 - 78929 1905 ## COG3533 Uncharacterized protein conserved in bacteria + Term 79081 - 79113 -0.1 - Term 78974 - 79020 2.5 59 37 Tu 1 . - CDS 79029 - 80567 1844 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 80649 - 80708 3.4 60 38 Tu 1 . + CDS 80734 - 81618 327 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 + Term 81816 - 81849 0.7 61 39 Op 1 7/0.083 - CDS 81622 - 83460 1861 ## COG3276 Selenocysteine-specific translation elongation factor 62 39 Op 2 4/0.364 - CDS 83457 - 84842 1273 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] - Term 84854 - 84891 5.4 63 40 Op 1 . - CDS 84946 - 85554 717 ## COG0625 Glutathione S-transferase - Prom 85577 - 85636 2.9 - Term 85595 - 85635 5.0 64 40 Op 2 . - CDS 85644 - 86780 1365 ## COG1566 Multidrug resistance efflux pump 65 40 Op 3 . - CDS 86783 - 87139 394 ## ECL_00172 hypothetical protein - Prom 87258 - 87317 5.7 + Prom 87532 - 87591 9.0 66 41 Tu 1 11/0.017 + CDS 87804 - 89711 2632 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 67 42 Op 1 7/0.083 + CDS 89814 - 90962 1481 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 68 42 Op 2 . + CDS 91025 - 91549 505 ## COG3722 Transcriptional regulator 69 42 Op 3 . + CDS 91608 - 91970 567 ## CKO_05058 hypothetical protein + Term 92004 - 92046 8.4 + Prom 92136 - 92195 4.2 70 43 Tu 1 . + CDS 92238 - 93026 389 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits + Prom 93931 - 93990 80.4 71 44 Tu 1 . + CDS 94129 - 94431 66 ## ECL_00163 putative superfamily I DNA and RNA helicase protein + Term 94538 - 94585 1.3 72 45 Op 1 . - CDS 94570 - 95664 814 ## Pvag_pPag30168 long polar fimbria protein A 73 45 Op 2 10/0.021 - CDS 95674 - 98154 2148 ## COG3188 P pilus assembly protein, porin PapC 74 45 Op 3 7/0.083 - CDS 98159 - 98830 348 ## COG3121 P pilus assembly protein, chaperone PapD 75 45 Op 4 . - CDS 98864 - 99445 558 ## COG3539 P pilus assembly protein, pilin FimA - Prom 99653 - 99712 4.6 + Prom 100363 - 100422 2.8 76 46 Op 1 4/0.364 + CDS 100544 - 102199 2266 ## COG1620 L-lactate permease 77 46 Op 2 5/0.231 + CDS 102196 - 102969 924 ## COG2186 Transcriptional regulators 78 46 Op 3 2/0.587 + CDS 102966 - 104153 1551 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases + Term 104182 - 104216 4.2 + Prom 104185 - 104244 4.3 79 47 Op 1 . + CDS 104334 - 105674 1448 ## COG0477 Permeases of the major facilitator superfamily 80 47 Op 2 . + CDS 105721 - 106194 549 ## COG0219 Predicted rRNA methylase (SpoU class) + Term 106201 - 106234 6.1 - Term 106189 - 106222 6.1 81 48 Tu 1 . - CDS 106233 - 107708 2117 ## COG0059 Ketol-acid reductoisomerase - Prom 107767 - 107826 5.0 + Prom 107758 - 107817 3.9 82 49 Tu 1 . + CDS 107861 - 108751 861 ## COG0583 Transcriptional regulator - Term 108740 - 108779 1.0 83 50 Op 1 8/0.053 - CDS 108797 - 110341 2027 ## COG1171 Threonine dehydratase 84 50 Op 2 5/0.231 - CDS 110344 - 112194 2459 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Term 112212 - 112245 3.7 85 51 Op 1 5/0.231 - CDS 112255 - 113184 1172 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 86 51 Op 2 7/0.083 - CDS 113203 - 113466 151 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 87 51 Op 3 . - CDS 113463 - 115109 1735 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Prom 115416 - 115475 6.0 88 52 Tu 1 . + CDS 115689 - 117209 734 ## COG0606 Predicted ATPase with chaperone activity + Term 117216 - 117241 -0.5 - Term 117201 - 117232 2.5 89 53 Tu 1 . - CDS 117238 - 117576 400 ## COG3085 Uncharacterized protein conserved in bacteria - Prom 117634 - 117693 6.1 + Prom 117582 - 117641 4.4 90 54 Tu 1 . + CDS 117683 - 118516 316 ## COG0583 Transcriptional regulator + Term 118524 - 118555 3.2 - TRNA 118617 - 118692 87.1 # Trp CCA 0 0 91 55 Op 1 2/0.587 - CDS 122896 - 123747 820 ## COG0796 Glutamate racemase 92 55 Op 2 . - CDS 123692 - 125539 1710 ## COG4206 Outer membrane cobalamin receptor protein - Prom 125766 - 125825 3.1 + Prom 125476 - 125535 2.4 93 56 Tu 1 . + CDS 125567 - 125785 70 ## ECL_05022 hypothetical protein + Prom 125800 - 125859 3.7 94 57 Tu 1 . + CDS 125886 - 126986 1457 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 95 58 Op 1 . - CDS 127077 - 127436 380 ## ECL_05024 hypothetical protein 96 58 Op 2 . - CDS 127446 - 128081 662 ## COG1309 Transcriptional regulator - Prom 128125 - 128184 4.5 + Prom 128190 - 128249 4.3 97 59 Tu 1 . + CDS 128281 - 129681 434 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 129560 - 129612 -0.8 98 60 Tu 1 . - CDS 129664 - 130581 1239 ## COG0583 Transcriptional regulator - Prom 130615 - 130674 5.0 - Term 130793 - 130829 2.2 99 61 Op 1 2/0.587 - CDS 130887 - 132260 1855 ## COG0165 Argininosuccinate lyase 100 61 Op 2 8/0.053 - CDS 132338 - 133111 1009 ## COG0548 Acetylglutamate kinase 101 61 Op 3 . - CDS 133121 - 134125 1154 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 134172 - 134231 5.4 + Prom 134106 - 134165 4.3 102 62 Tu 1 . + CDS 134214 - 135365 1259 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 135386 - 135420 8.3 + Prom 135562 - 135621 3.0 103 63 Tu 1 . + CDS 135712 - 138324 3568 ## COG2352 Phosphoenolpyruvate carboxylase 104 64 Tu 1 . + CDS 138531 - 139634 1331 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 139682 - 139737 6.2 - Term 139630 - 139668 8.0 105 65 Op 1 . - CDS 139726 - 141906 2555 ## COG0376 Catalase (peroxidase I) - Term 142011 - 142043 2.4 106 65 Op 2 4/0.364 - CDS 142050 - 142940 1069 ## COG0685 5,10-methylenetetrahydrofolate reductase - Prom 143114 - 143173 2.7 - Term 143073 - 143136 12.7 107 66 Op 1 5/0.231 - CDS 143203 - 145635 3315 ## COG0527 Aspartokinases 108 66 Op 2 . - CDS 145638 - 146798 1069 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 146922 - 146981 5.5 + Prom 146878 - 146937 6.7 109 67 Tu 1 . + CDS 147074 - 147391 371 ## COG3060 Transcriptional regulator of met regulon + Term 147403 - 147440 7.8 - Term 147380 - 147410 0.2 110 68 Tu 1 . - CDS 147434 - 148114 720 ## SARI_03559 hypothetical protein - Prom 148189 - 148248 8.8 - Term 148392 - 148425 3.8 111 69 Tu 1 . - CDS 148436 - 148648 367 ## PROTEIN SUPPORTED gi|146313669|ref|YP_001178743.1| 50S ribosomal protein L31 - Prom 148746 - 148805 5.2 + Prom 148685 - 148744 4.3 112 70 Tu 1 . + CDS 148849 - 151044 2519 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase + Prom 151071 - 151130 2.9 113 71 Op 1 . + CDS 151196 - 152188 844 ## COG1609 Transcriptional regulators + Prom 152192 - 152251 2.2 114 71 Op 2 . + CDS 152386 - 153249 794 ## COG3087 Cell division protein + Term 153286 - 153319 6.1 - Term 153167 - 153218 -0.4 115 72 Tu 1 . - CDS 153278 - 153547 160 ## 116 73 Op 1 24/0.000 + CDS 153425 - 153874 611 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 117 73 Op 2 6/0.121 + CDS 153884 - 155215 1207 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 155244 - 155277 4.5 118 74 Op 1 7/0.083 + CDS 155284 - 156204 1391 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Prom 156212 - 156271 5.1 119 74 Op 2 . + CDS 156297 - 156782 702 ## COG0684 Demethylmenaquinone methyltransferase + Term 156811 - 156850 7.0 - Term 156799 - 156838 5.2 120 75 Tu 1 . - CDS 156864 - 157103 513 ## COG3074 Uncharacterized protein conserved in bacteria + Prom 157369 - 157428 2.9 121 76 Op 1 18/0.000 + CDS 157503 - 158348 819 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 122 76 Op 2 4/0.364 + CDS 158370 - 159878 2122 ## COG0554 Glycerol kinase + Term 159905 - 159939 8.3 123 77 Op 1 4/0.364 + CDS 160044 - 161054 1352 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins + Term 161075 - 161112 6.2 124 77 Op 2 . + CDS 161151 - 161897 939 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 125 78 Tu 1 . - CDS 161898 - 162317 528 ## COG3152 Predicted membrane protein - Prom 162340 - 162399 4.7 + Prom 162347 - 162406 3.3 126 79 Tu 1 . + CDS 162469 - 163026 849 ## Ent638_4051 hypothetical protein + Term 163081 - 163111 0.5 + Prom 163052 - 163111 2.3 127 80 Tu 1 . + CDS 163138 - 163905 952 ## COG0149 Triosephosphate isomerase + Term 163914 - 163959 3.3 128 81 Op 1 . - CDS 163988 - 165292 1715 ## COG0471 Di- and tricarboxylate transporters 129 81 Op 2 4/0.364 - CDS 165366 - 166109 704 ## COG2134 CDP-diacylglycerol pyrophosphatase - Prom 166133 - 166192 6.8 - Term 166160 - 166194 2.4 130 82 Tu 1 . - CDS 166221 - 167210 1442 ## COG1613 ABC-type sulfate transport system, periplasmic component - Prom 167268 - 167327 8.2 - Term 167321 - 167360 5.2 131 83 Tu 1 . - CDS 167419 - 168381 1300 ## COG0205 6-phosphofructokinase - Prom 168452 - 168511 3.4 132 84 Tu 1 . - CDS 168566 - 169450 568 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 169470 - 169529 4.2 133 85 Tu 1 . - CDS 170040 - 171101 144 ## COG3500 Phage protein D - Prom 171141 - 171200 6.5 - Term 171162 - 171196 5.3 134 86 Tu 1 . - CDS 171211 - 171432 107 ## plu4458 hypothetical protein - Prom 171655 - 171714 4.3 135 87 Op 1 . - CDS 173836 - 174321 111 ## plu4458 hypothetical protein 136 87 Op 2 . - CDS 174335 - 175267 160 ## COG0464 ATPases of the AAA+ class - Prom 175491 - 175550 9.3 - Term 175541 - 175589 -0.1 137 88 Tu 1 . - CDS 175594 - 176289 243 ## gi|320198800|gb|EFW73400.1| Phage replication protein - Term 177026 - 177056 4.3 138 89 Tu 1 . - CDS 177094 - 177600 248 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 177766 - 177825 2.2 139 90 Op 1 40/0.000 + CDS 177751 - 178449 859 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 140 90 Op 2 . + CDS 178446 - 179819 1400 ## COG0642 Signal transduction histidine kinase + Term 179821 - 179883 29.7 141 91 Op 1 . - CDS 179873 - 180547 456 ## COG2258 Uncharacterized protein conserved in bacteria - Term 180556 - 180595 6.8 142 91 Op 2 . - CDS 180614 - 181234 580 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 181294 - 181353 7.3 + Prom 181289 - 181348 8.1 143 92 Tu 1 . + CDS 181523 - 182557 1492 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 144 93 Op 1 8/0.053 - CDS 182558 - 183406 824 ## COG2207 AraC-type DNA-binding domain-containing proteins 145 93 Op 2 . - CDS 183480 - 184316 782 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 184383 - 184442 3.2 + Prom 184534 - 184593 1.7 146 94 Op 1 6/0.121 + CDS 184618 - 186087 1681 ## COG1070 Sugar (pentulose and hexulose) kinases 147 94 Op 2 5/0.231 + CDS 186084 - 187343 1632 ## COG4806 L-rhamnose isomerase + Term 187394 - 187431 -1.0 148 94 Op 3 . + CDS 187440 - 188270 1277 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 149 94 Op 4 16/0.000 + CDS 188353 - 189339 1345 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 189708 - 189767 80.3 150 95 Op 1 21/0.000 + CDS 189949 - 191451 1739 ## COG1129 ABC-type sugar transport system, ATPase component 151 95 Op 2 11/0.017 + CDS 191452 - 192456 1518 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 152 95 Op 3 1/0.716 + CDS 192465 - 193454 1287 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components + Prom 193456 - 193515 48.3 153 96 Op 1 2/0.587 + CDS 193575 - 194723 1704 ## COG1454 Alcohol dehydrogenase, class IV 154 96 Op 2 . + CDS 194720 - 195034 314 ## COG3254 Uncharacterized conserved protein + Term 195038 - 195089 16.2 - Term 194893 - 194944 -0.0 155 97 Tu 1 . - CDS 195078 - 195626 585 ## COG1396 Predicted transcriptional regulators - Prom 195686 - 195745 3.7 + Prom 195649 - 195708 4.0 156 98 Op 1 . + CDS 195730 - 196389 886 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 157 98 Op 2 . + CDS 196389 - 196712 484 ## Ent638_4081 branched-chain amino acid transport + Term 196860 - 196894 -0.2 - Term 196705 - 196747 11.7 158 99 Op 1 . - CDS 196755 - 197354 569 ## CKO_03112 hypothetical protein 159 99 Op 2 10/0.021 - CDS 197345 - 199768 2233 ## COG3188 P pilus assembly protein, porin PapC 160 99 Op 3 . - CDS 199796 - 200482 628 ## COG3121 P pilus assembly protein, chaperone PapD - Term 200496 - 200533 6.2 161 99 Op 4 . - CDS 200559 - 201263 580 ## CKO_03115 hypothetical protein - Prom 201493 - 201552 5.3 - Term 201697 - 201738 8.1 162 100 Op 1 . - CDS 201751 - 201963 261 ## ECL_05087 hypothetical protein 163 100 Op 2 . - CDS 202079 - 202888 746 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity - Prom 203086 - 203145 5.5 + Prom 203050 - 203109 6.0 164 101 Op 1 5/0.231 + CDS 203287 - 203874 620 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 165 101 Op 2 16/0.000 + CDS 203923 - 206337 2959 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 166 101 Op 3 12/0.013 + CDS 206350 - 207252 1086 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 167 101 Op 4 9/0.034 + CDS 207249 - 207884 672 ## COG2864 Cytochrome b subunit of formate dehydrogenase 168 101 Op 5 . + CDS 207881 - 208810 1180 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation + Term 208822 - 208861 1.0 169 102 Op 1 1/0.716 - CDS 208852 - 209142 216 ## COG2944 Predicted transcriptional regulator 170 102 Op 2 1/0.716 - CDS 209143 - 209454 58 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system - Prom 209484 - 209543 3.4 171 103 Op 1 5/0.231 - CDS 209603 - 210544 1131 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 172 103 Op 2 7/0.083 - CDS 210589 - 211026 378 ## COG1490 D-Tyr-tRNAtyr deacylase 173 103 Op 3 2/0.587 - CDS 211023 - 211904 811 ## COG1295 Predicted membrane protein 174 103 Op 4 1/0.716 - CDS 211898 - 212497 635 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 212538 - 212597 2.3 - Term 212572 - 212606 5.2 175 104 Op 1 3/0.483 - CDS 212616 - 213416 910 ## COG1349 Transcriptional regulators of sugar metabolism 176 104 Op 2 . - CDS 213451 - 214380 809 ## COG0524 Sugar kinases, ribokinase family - Prom 214419 - 214478 2.9 + Prom 214353 - 214412 2.8 177 105 Op 1 4/0.364 + CDS 214503 - 215393 1152 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 178 105 Op 2 3/0.483 + CDS 215417 - 216286 1024 ## COG3684 Tagatose-1,6-bisphosphate aldolase 179 105 Op 3 . + CDS 216301 - 217542 1716 ## COG2942 N-acyl-D-glucosamine 2-epimerase 180 105 Op 4 3/0.483 + CDS 217559 - 219583 2606 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 181 105 Op 5 3/0.483 + CDS 219629 - 221011 1867 ## COG2211 Na+/melibiose symporter and related transporters 182 105 Op 6 . + CDS 221055 - 222479 1693 ## COG2211 Na+/melibiose symporter and related transporters 183 105 Op 7 . + CDS 222497 - 223240 852 ## ECL_05109 putative porin + Term 223248 - 223279 4.1 - Term 223236 - 223267 4.1 184 106 Tu 1 . - CDS 223320 - 225143 2150 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 225170 - 225229 4.0 185 107 Tu 1 . + CDS 225521 - 226930 1586 ## COG0174 Glutamine synthetase + Term 226986 - 227015 2.1 + Prom 227008 - 227067 3.2 186 108 Op 1 14/0.008 + CDS 227098 - 228147 1231 ## COG3852 Signal transduction histidine kinase, nitrogen specific 187 108 Op 2 . + CDS 228159 - 229571 1330 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Term 229604 - 229639 3.5 - Term 229716 - 229759 3.0 188 109 Tu 1 . - CDS 229893 - 231266 1653 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 231368 - 231427 2.1 189 110 Tu 1 . - CDS 231455 - 231970 624 ## COG3078 Uncharacterized protein conserved in bacteria - Prom 231992 - 232051 4.3 + Prom 232465 - 232524 3.4 190 111 Tu 1 . + CDS 232551 - 233180 760 ## COG0218 Predicted GTPase + Term 233187 - 233217 3.0 - Term 233428 - 233476 6.1 191 112 Tu 1 . - CDS 233493 - 236285 3127 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 236513 - 236572 4.5 + Prom 236007 - 236066 4.6 192 113 Tu 1 . + CDS 236217 - 236447 101 ## + Prom 236701 - 236760 2.4 193 114 Tu 1 . + CDS 236888 - 237634 680 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Term 237598 - 237650 8.1 194 115 Op 1 5/0.231 - CDS 237657 - 238280 887 ## COG0526 Thiol-disulfide isomerase and thioredoxins 195 115 Op 2 5/0.231 - CDS 238308 - 239294 657 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 196 115 Op 3 . - CDS 239370 - 239639 345 ## COG3084 Uncharacterized protein conserved in bacteria 197 115 Op 4 . - CDS 239657 - 239878 105 ## 198 116 Tu 1 11/0.017 + CDS 239765 - 240292 368 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 199 117 Tu 1 . + CDS 240415 - 240792 396 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein + Prom 244411 - 244470 80.4 200 118 Op 1 5/0.231 + CDS 244636 - 245343 726 ## COG2186 Transcriptional regulators 201 118 Op 2 . + CDS 245340 - 246773 1579 ## COG0477 Permeases of the major facilitator superfamily + Term 246791 - 246858 9.5 - Term 246488 - 246527 3.1 202 119 Op 1 13/0.011 - CDS 246739 - 247722 1016 ## COG1609 Transcriptional regulators 203 119 Op 2 8/0.053 - CDS 247735 - 248664 955 ## COG0524 Sugar kinases, ribokinase family 204 120 Op 1 16/0.000 - CDS 248773 - 249663 1083 ## COG1879 ABC-type sugar transport system, periplasmic component 205 120 Op 2 21/0.000 - CDS 249691 - 250656 1252 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 206 120 Op 3 9/0.034 - CDS 250661 - 252211 2159 ## COG1129 ABC-type sugar transport system, ATPase component 207 120 Op 4 4/0.364 - CDS 252174 - 252593 429 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 252622 - 252681 3.5 208 121 Tu 1 . - CDS 252790 - 254658 2315 ## COG3158 K+ transporter - Prom 254871 - 254930 2.7 + Prom 254784 - 254843 3.9 209 122 Op 1 7/0.083 + CDS 254881 - 256377 1435 ## COG0714 MoxR-like ATPases 210 122 Op 2 . + CDS 256371 - 257822 1088 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 211 123 Tu 1 . - CDS 257823 - 258815 1107 ## COG2502 Asparagine synthetase A - Prom 258922 - 258981 3.5 + Prom 258881 - 258940 5.6 212 124 Op 1 4/0.364 + CDS 258967 - 259425 579 ## COG1522 Transcriptional regulators 213 124 Op 2 5/0.231 + CDS 259516 - 259965 462 ## COG0716 Flavodoxins + Prom 260186 - 260245 7.3 214 125 Op 1 24/0.000 + CDS 260340 - 262229 1896 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 215 125 Op 2 3/0.483 + CDS 262337 - 262960 374 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Prom 263434 - 263493 6.7 216 126 Op 1 8/0.053 + CDS 263577 - 263957 254 ## COG3312 F0F1-type ATP synthase, subunit I 217 126 Op 2 40/0.000 + CDS 263966 - 264781 1001 ## COG0356 F0F1-type ATP synthase, subunit a 218 126 Op 3 37/0.000 + CDS 264831 - 265070 345 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 219 126 Op 4 38/0.000 + CDS 265125 - 265589 501 ## COG0711 F0F1-type ATP synthase, subunit b 220 126 Op 5 41/0.000 + CDS 265604 - 266137 634 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 221 126 Op 6 42/0.000 + CDS 266150 - 267691 1601 ## COG0056 F0F1-type ATP synthase, alpha subunit 222 126 Op 7 42/0.000 + CDS 267743 - 268606 1165 ## COG0224 F0F1-type ATP synthase, gamma subunit 223 126 Op 8 42/0.000 + CDS 268638 - 270020 1584 ## COG0055 F0F1-type ATP synthase, beta subunit 224 126 Op 9 6/0.121 + CDS 270041 - 270460 462 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 270465 - 270531 14.5 + Prom 270495 - 270554 7.5 225 127 Tu 1 9/0.034 + CDS 270599 - 271969 1674 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) + Term 271984 - 272041 23.0 + Prom 272061 - 272120 2.1 226 128 Tu 1 2/0.587 + CDS 272208 - 274037 2495 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 274046 - 274079 3.8 + Prom 274048 - 274107 8.3 227 129 Op 1 39/0.000 + CDS 274284 - 275354 1236 ## COG0226 ABC-type phosphate transport system, periplasmic component + Term 275420 - 275459 -1.0 + Prom 275399 - 275458 3.4 228 129 Op 2 38/0.000 + CDS 275483 - 276442 1494 ## COG0573 ABC-type phosphate transport system, permease component 229 129 Op 3 41/0.000 + CDS 276442 - 277332 1116 ## COG0581 ABC-type phosphate transport system, permease component 230 129 Op 4 32/0.000 + CDS 277380 - 278153 330 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 231 129 Op 5 . + CDS 278180 - 278905 1047 ## COG0704 Phosphate uptake regulator + Term 278909 - 278956 7.0 232 130 Tu 1 . - CDS 278950 - 279615 699 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 279733 - 279792 1.8 + Prom 279590 - 279649 3.1 233 131 Tu 1 . + CDS 279778 - 281118 1800 ## COG2252 Permeases + Term 281175 - 281215 11.2 234 132 Op 1 3/0.483 - CDS 281210 - 281776 655 ## COG0431 Predicted flavoprotein 235 132 Op 2 4/0.364 - CDS 281813 - 282406 401 ## COG2091 Phosphopantetheinyl transferase - Prom 282598 - 282657 4.8 236 133 Op 1 9/0.034 - CDS 282682 - 283653 922 ## COG0583 Transcriptional regulator 237 133 Op 2 . - CDS 283622 - 284836 1214 ## COG0477 Permeases of the major facilitator superfamily 238 133 Op 3 10/0.021 - CDS 284909 - 286273 1801 ## COG0486 Predicted GTPase - Term 286284 - 286329 8.2 239 134 Op 1 22/0.000 - CDS 286346 - 287989 1961 ## COG0706 Preprotein translocase subunit YidC - Prom 288053 - 288112 3.9 240 134 Op 2 . - CDS 288213 - 288539 75 ## COG0594 RNase P protein component 241 134 Op 3 . - CDS 288589 - 288729 228 ## PROTEIN SUPPORTED gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 - Prom 288824 - 288883 6.9 + Prom 289298 - 289357 2.2 242 135 Op 1 16/0.000 + CDS 289436 - 290761 1541 ## COG0593 ATPase involved in DNA replication initiation 243 135 Op 2 18/0.000 + CDS 290766 - 291866 1196 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 244 135 Op 3 9/0.034 + CDS 291866 - 292939 881 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 245 135 Op 4 . + CDS 292968 - 295379 3260 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 246 135 Op 5 . + CDS 295468 - 296217 730 ## COG2186 Transcriptional regulators - Term 296095 - 296124 0.0 247 136 Tu 1 . - CDS 296259 - 297347 1306 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 297464 - 297523 7.5 + Prom 297591 - 297650 5.9 248 137 Op 1 2/0.587 + CDS 297753 - 299192 1073 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 249 137 Op 2 2/0.587 + CDS 299189 - 300205 679 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 250 137 Op 3 . + CDS 300215 - 301222 827 ## COG2055 Malate/L-lactate dehydrogenases + Prom 301289 - 301348 6.3 251 138 Tu 1 . + CDS 301369 - 302550 1216 ## COG0477 Permeases of the major facilitator superfamily + Prom 302625 - 302684 3.3 252 139 Tu 1 . + CDS 302708 - 303520 1018 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 303540 - 303572 3.0 + Prom 303549 - 303608 3.0 253 140 Op 1 1/0.716 + CDS 303747 - 304436 744 ## COG2186 Transcriptional regulators 254 140 Op 2 2/0.587 + CDS 304433 - 305311 737 ## COG3734 2-keto-3-deoxy-galactonokinase 255 140 Op 3 1/0.716 + CDS 305295 - 305912 681 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 256 140 Op 4 7/0.083 + CDS 305909 - 307057 1605 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Term 307073 - 307109 -0.9 + Prom 307155 - 307214 4.2 257 141 Op 1 . + CDS 307238 - 308575 1920 ## COG0477 Permeases of the major facilitator superfamily 258 141 Op 2 . + CDS 308627 - 309856 1031 ## ECL_00013 putative ATP/GTP-binding protein - Term 309800 - 309845 11.9 259 142 Tu 1 . - CDS 309853 - 310113 256 ## COG5645 Predicted periplasmic lipoprotein + Prom 310347 - 310406 2.3 260 143 Tu 1 4/0.364 + CDS 310500 - 310910 637 ## COG0071 Molecular chaperone (small heat shock protein) + Term 310912 - 310952 -1.0 + Prom 310961 - 311020 2.5 261 144 Tu 1 1/0.716 + CDS 311047 - 311475 687 ## COG0071 Molecular chaperone (small heat shock protein) + Term 311570 - 311605 5.8 + Prom 311587 - 311646 2.3 262 145 Tu 1 . + CDS 311667 - 313337 2132 ## COG2985 Predicted permease - Term 313209 - 313252 2.2 263 146 Op 1 3/0.483 - CDS 313334 - 314818 1372 ## COG3119 Arylsulfatase A and related enzymes 264 146 Op 2 11/0.017 - CDS 314828 - 315151 342 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 265 146 Op 3 . - CDS 315180 - 316505 1240 ## COG3037 Uncharacterized protein conserved in bacteria - Prom 316681 - 316740 10.2 + Prom 316651 - 316710 8.9 266 147 Tu 1 . + CDS 316939 - 318354 1177 ## Despr_1642 arylsulfotransferase 267 148 Tu 1 . - CDS 318370 - 319113 783 ## COG2188 Transcriptional regulators - Prom 319190 - 319249 2.9 + Prom 319149 - 319208 3.8 268 149 Op 1 2/0.587 + CDS 319336 - 320958 1857 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 269 149 Op 2 . + CDS 320955 - 322277 1707 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 322285 - 322322 7.8 270 150 Op 1 . + CDS 322370 - 322717 512 ## COG2149 Predicted membrane protein 271 150 Op 2 . + CDS 322707 - 323069 260 ## CKO_00023 hypothetical protein 272 150 Op 3 . + CDS 323066 - 324169 934 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 323945 - 323983 0.1 273 151 Tu 1 . - CDS 324173 - 325462 1632 ## COG3048 D-serine dehydratase - Prom 325519 - 325578 3.4 + Prom 325413 - 325472 3.0 274 152 Tu 1 . + CDS 325584 - 326633 899 ## ECL_00026 hypothetical protein - Term 326510 - 326540 3.3 275 153 Tu 1 8/0.053 - CDS 326551 - 327702 1533 ## COG0477 Permeases of the major facilitator superfamily - Prom 327800 - 327859 5.4 - Term 327876 - 327904 0.3 276 154 Op 1 . - CDS 327911 - 328744 934 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 277 154 Op 2 . - CDS 328807 - 329253 472 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 329262 - 329295 6.8 278 154 Op 3 . - CDS 329318 - 329407 67 ## - Prom 329589 - 329648 2.6 + Prom 329664 - 329723 4.8 279 155 Tu 1 . + CDS 329859 - 330275 277 ## COG5499 Predicted transcription regulator containing HTH domain + Prom 330339 - 330398 3.2 280 156 Op 1 32/0.000 + CDS 330628 - 332316 2087 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 281 156 Op 2 1/0.716 + CDS 332320 - 332607 387 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 332641 - 332678 -0.1 + Prom 332611 - 332670 2.6 282 157 Op 1 5/0.231 + CDS 332690 - 333283 746 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 283 157 Op 2 5/0.231 + CDS 333280 - 334785 1882 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 284 157 Op 3 3/0.483 + CDS 334778 - 336088 1814 ## COG2271 Sugar phosphate permease + Prom 336136 - 336195 2.5 285 158 Op 1 . + CDS 336221 - 337612 2249 ## COG2271 Sugar phosphate permease + Term 337632 - 337665 4.0 + Prom 337624 - 337683 2.0 286 158 Op 2 . + CDS 337774 - 338778 1377 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 338793 - 338835 7.1 + Prom 338850 - 338909 1.9 287 159 Tu 1 . + CDS 338930 - 339382 555 ## ECL_00042 hypothetical protein + Term 339400 - 339436 -0.8 288 160 Tu 1 . - CDS 339379 - 340299 439 ## COG0583 Transcriptional regulator - Prom 340372 - 340431 6.0 + Prom 340354 - 340413 5.4 289 161 Op 1 . + CDS 340487 - 340867 289 ## ETA_24120 hypothetical protein 290 161 Op 2 . + CDS 340921 - 341145 161 ## ETA_24090 4-oxalocrotonate tautomerase family protein 291 161 Op 3 . + CDS 341206 - 341409 118 ## ETA_24080 HAD-superfamily hydrolase, subfamily IB 292 161 Op 4 . + CDS 341415 - 342635 890 ## COG2814 Arabinose efflux permease 293 161 Op 5 . + CDS 342681 - 342989 267 ## COG0183 Acetyl-CoA acetyltransferase + Term 343021 - 343062 6.0 - Term 343017 - 343042 -0.5 294 162 Tu 1 . - CDS 343066 - 344064 772 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 344216 - 344275 2.9 + Prom 344038 - 344097 5.9 295 163 Tu 1 . + CDS 344272 - 345462 1509 ## COG2814 Arabinose efflux permease - Term 345457 - 345516 6.1 296 164 Op 1 1/0.716 - CDS 345579 - 346895 1517 ## COG1541 Coenzyme F390 synthetase 297 164 Op 2 1/0.716 - CDS 346922 - 348127 1431 ## COG0183 Acetyl-CoA acetyltransferase 298 164 Op 3 1/0.716 - CDS 348127 - 348549 518 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 299 164 Op 4 7/0.083 - CDS 348539 - 349963 1553 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 300 164 Op 5 12/0.013 - CDS 349965 - 350750 894 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 301 164 Op 6 1/0.716 - CDS 350753 - 351520 955 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 302 164 Op 7 2/0.587 - CDS 351517 - 352587 1162 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 303 164 Op 8 4/0.364 - CDS 352595 - 353092 499 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 304 164 Op 9 5/0.231 - CDS 353104 - 353850 1030 ## COG3396 Uncharacterized conserved protein 305 164 Op 10 5/0.231 - CDS 353859 - 354146 345 ## COG3460 Uncharacterized enzyme of phenylacetate metabolism 306 164 Op 11 . - CDS 354159 - 355142 1095 ## COG3396 Uncharacterized conserved protein - Prom 355165 - 355224 4.6 + Prom 355271 - 355330 5.6 307 165 Tu 1 . + CDS 355374 - 357416 2265 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 357435 - 357471 8.7 + Prom 357453 - 357512 2.9 308 166 Tu 1 . + CDS 357612 - 359885 2677 ## COG3733 Cu2+-containing amine oxidase + Term 359892 - 359924 3.8 + Prom 359904 - 359963 5.1 309 167 Tu 1 . + CDS 360006 - 361112 934 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Term 361141 - 361188 1.0 310 168 Tu 1 . - CDS 361193 - 362692 1720 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 362724 - 362783 2.2 + Prom 362784 - 362843 3.8 311 169 Tu 1 . + CDS 362934 - 363842 826 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 363956 - 363986 -0.4 312 170 Op 1 . - CDS 363843 - 364142 347 ## COG3784 Uncharacterized protein conserved in bacteria 313 170 Op 2 . - CDS 364168 - 364359 206 ## ECL_02163 putative outer membrane lipoprotein 314 170 Op 3 . - CDS 364356 - 366995 2519 ## ECL_02164 hypothetical protein - Prom 367153 - 367212 5.4 + Prom 367106 - 367165 9.3 315 171 Tu 1 . + CDS 367206 - 368195 1191 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Term 368186 - 368223 0.4 316 172 Tu 1 . - CDS 368320 - 368991 76 ## EbC_17750 hypothetical protein - Prom 369097 - 369156 3.2 317 173 Tu 1 . - CDS 369646 - 371931 950 ## Pfl01_4570 hypothetical protein - Prom 372026 - 372085 2.1 - Term 372052 - 372085 4.5 318 174 Op 1 . - CDS 372118 - 372645 451 ## PSEBR_a4520 hypothetical protein 319 174 Op 2 . - CDS 372711 - 373079 75 ## HDEF_0288 hypothetical protein + Prom 373275 - 373334 2.5 320 175 Tu 1 . + CDS 373381 - 373587 116 ## + Prom 373628 - 373687 2.8 321 176 Op 1 . + CDS 373726 - 374502 210 ## Rahaq_0392 CadC family transcriptional regulator 322 176 Op 2 . + CDS 374506 - 374994 178 ## 323 177 Tu 1 . - CDS 375074 - 375247 212 ## PROTEIN SUPPORTED gi|16760699|ref|NP_456316.1| hypothetical protein STY1938 - Prom 375327 - 375386 3.8 - Term 375504 - 375530 0.1 324 178 Tu 1 . - CDS 375552 - 375830 307 ## KPN_00497 hypothetical protein - Prom 376017 - 376076 2.0 + Prom 375809 - 375868 5.5 325 179 Tu 1 . + CDS 376058 - 376648 508 ## Ctu_28590 hypothetical protein + Term 376676 - 376717 8.1 - Term 376663 - 376704 8.1 326 180 Op 1 . - CDS 376722 - 378779 2375 ## COG4993 Glucose dehydrogenase 327 180 Op 2 . - CDS 378829 - 379194 401 ## Csal_0171 hypothetical protein - Prom 379322 - 379381 3.8 + Prom 379569 - 379628 5.4 328 181 Op 1 . + CDS 379831 - 381093 1518 ## COG0814 Amino acid permeases 329 181 Op 2 . + CDS 381180 - 381419 343 ## Ctu_26810 virulence protein MsgA + Term 381420 - 381448 1.3 - Term 381404 - 381439 3.1 330 182 Tu 1 . - CDS 381445 - 383496 2259 ## COG0339 Zn-dependent oligopeptidases + Prom 383419 - 383478 3.1 331 183 Op 1 5/0.231 + CDS 383640 - 384386 1083 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity + Term 384396 - 384425 3.5 + Prom 384392 - 384451 3.1 332 183 Op 2 . + CDS 384477 - 385163 570 ## COG1802 Transcriptional regulators - Term 385154 - 385195 3.2 333 184 Tu 1 . - CDS 385199 - 385612 393 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 385783 - 385842 4.9 + Prom 385612 - 385671 4.5 334 185 Tu 1 . + CDS 385918 - 386121 306 ## ECL_02177 hypothetical protein 335 186 Tu 1 3/0.483 - CDS 386166 - 387629 1691 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 387692 - 387751 4.0 336 187 Op 1 7/0.083 - CDS 387852 - 389231 1713 ## COG0477 Permeases of the major facilitator superfamily - Term 389245 - 389296 0.1 337 187 Op 2 2/0.587 - CDS 389305 - 390324 1165 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 338 187 Op 3 . - CDS 390339 - 391553 1499 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 391583 - 391642 3.8 + Prom 391585 - 391644 4.6 339 188 Op 1 . + CDS 391840 - 392178 355 ## SARI_01439 hypothetical protein 340 188 Op 2 . + CDS 392178 - 392738 478 ## PROTEIN SUPPORTED gi|116490772|ref|YP_810316.1| acetyltransferase 341 189 Tu 1 . - CDS 392756 - 393379 665 ## ECL_02187 hypothetical protein - Prom 393490 - 393549 3.0 + Prom 393578 - 393637 4.0 342 190 Tu 1 . + CDS 393660 - 394511 456 ## Bmul_0967 hypothetical protein 343 191 Tu 1 . + CDS 394614 - 394919 343 ## Ent638_1926 hypothetical protein + Prom 394971 - 395030 5.9 344 192 Op 1 5/0.231 + CDS 395050 - 396033 923 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 345 192 Op 2 16/0.000 + CDS 395996 - 397489 1756 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 346 192 Op 3 9/0.034 + CDS 397500 - 397820 378 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 + Prom 397822 - 397881 80.3 347 193 Op 1 4/0.364 + CDS 398108 - 398884 781 ## COG3302 DMSO reductase anchor subunit 348 193 Op 2 . + CDS 398929 - 399543 780 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Term 399546 - 399597 9.2 + Prom 399570 - 399629 6.5 349 194 Tu 1 . + CDS 399653 - 399964 421 ## COG3141 Uncharacterized protein conserved in bacteria + Term 399990 - 400028 10.1 350 195 Op 1 . - CDS 400077 - 400391 192 ## gi|295095963|emb|CBK85053.1| hypothetical protein ENC_12190 351 195 Op 2 . - CDS 400430 - 401107 240 ## COG4845 Chloramphenicol O-acetyltransferase 352 195 Op 3 . - CDS 401194 - 402078 735 ## COG0583 Transcriptional regulator - Prom 402161 - 402220 5.7 + Prom 402029 - 402088 1.7 353 196 Op 1 4/0.364 + CDS 402193 - 403320 1122 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 403329 - 403363 3.1 354 196 Op 2 . + CDS 403379 - 404563 992 ## COG2814 Arabinose efflux permease + Prom 404573 - 404632 5.5 355 197 Tu 1 . + CDS 404710 - 405459 576 ## ECL_02212 hypothetical protein + Term 405465 - 405508 3.6 356 198 Op 1 13/0.011 + CDS 405710 - 406420 815 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 357 198 Op 2 13/0.011 + CDS 406439 - 407338 1258 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 358 198 Op 3 24/0.000 + CDS 407347 - 407994 970 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 359 198 Op 4 . + CDS 407994 - 409142 1300 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components - Term 409769 - 409805 -0.7 360 199 Tu 1 . - CDS 409844 - 411034 237 ## COG5529 Pyocin large subunit + Prom 411595 - 411654 4.5 361 200 Tu 1 . + CDS 411788 - 413062 1059 ## COG0038 Chloride channel protein EriC - Term 412915 - 412953 2.2 362 201 Tu 1 . - CDS 412997 - 413692 883 ## COG0132 Dethiobiotin synthetase - Prom 413720 - 413779 7.5 363 202 Tu 1 5/0.231 - CDS 413826 - 415046 283 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 415083 - 415142 1.9 364 203 Tu 1 . - CDS 415168 - 416073 1003 ## COG0583 Transcriptional regulator - Prom 416097 - 416156 4.9 + Prom 416053 - 416112 6.6 365 204 Tu 1 . + CDS 416175 - 417449 1160 ## COG0477 Permeases of the major facilitator superfamily + Term 417462 - 417499 4.5 + Prom 417470 - 417529 7.3 366 205 Op 1 . + CDS 417621 - 418103 352 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 367 205 Op 2 . + CDS 418054 - 418566 175 ## Kvar_0973 hypothetical protein 368 205 Op 3 . + CDS 418566 - 418895 181 ## STM2902 cytoplasmic protein 369 206 Tu 1 . + CDS 418996 - 420483 1608 ## COG2317 Zn-dependent carboxypeptidase + Term 420491 - 420523 6.1 370 207 Tu 1 . + CDS 420633 - 420938 247 ## + Term 420981 - 421022 6.3 + Prom 421010 - 421069 4.6 371 208 Tu 1 . + CDS 421217 - 422038 557 ## COG3591 V8-like Glu-specific endopeptidase 372 209 Op 1 12/0.013 - CDS 422044 - 422373 540 ## COG2076 Membrane transporters of cations and cationic drugs 373 209 Op 2 . - CDS 422360 - 422722 372 ## COG2076 Membrane transporters of cations and cationic drugs + Prom 423064 - 423123 6.7 374 210 Tu 1 . + CDS 423143 - 424183 1341 ## COG0628 Predicted permease - Term 424100 - 424126 -0.6 375 211 Op 1 . - CDS 424180 - 425160 652 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 376 211 Op 2 . - CDS 425120 - 426154 985 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 426203 - 426262 2.1 + Prom 426274 - 426333 3.9 377 212 Tu 1 . + CDS 426361 - 426708 373 ## ECL_02239 hypothetical protein + Term 426724 - 426758 4.5 + Prom 426832 - 426891 6.3 378 213 Tu 1 . + CDS 426956 - 428221 571 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Prom 428232 - 428291 4.8 379 214 Tu 1 . + CDS 428325 - 429344 758 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog + Prom 429363 - 429422 4.1 380 215 Op 1 . + CDS 429483 - 429554 91 ## + Term 429561 - 429593 2.2 381 215 Op 2 2/0.587 + CDS 429610 - 430527 974 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 382 215 Op 3 . + CDS 430530 - 431285 840 ## COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 383 215 Op 4 . + CDS 431288 - 431566 355 ## Kvar_2488 coenzyme PQQ synthesis D 384 215 Op 5 . + CDS 431496 - 432695 1086 ## COG0535 Predicted Fe-S oxidoreductases 385 215 Op 6 . + CDS 432701 - 434977 1442 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like - Term 435010 - 435043 3.9 386 216 Tu 1 . - CDS 435062 - 437491 2454 ## COG4993 Glucose dehydrogenase - Prom 437577 - 437636 6.8 - Term 437511 - 437558 -0.1 387 217 Tu 1 . - CDS 437655 - 438074 421 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Prom 438294 - 438353 6.2 388 218 Tu 1 . + CDS 438400 - 438600 127 ## gi|295095986|emb|CBK85076.1| hypothetical protein ENC_12560 - Term 438590 - 438637 14.1 389 219 Tu 1 . - CDS 438647 - 439513 950 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 439535 - 439594 5.6 + Prom 439539 - 439598 3.8 390 220 Tu 1 . + CDS 439659 - 441320 1892 ## COG0840 Methyl-accepting chemotaxis protein + Term 441327 - 441361 6.6 - Term 441301 - 441356 4.2 391 221 Tu 1 . - CDS 441357 - 441920 526 ## COG2840 Uncharacterized protein conserved in bacteria - Prom 442047 - 442106 5.5 - Term 442076 - 442121 0.2 392 222 Tu 1 . - CDS 442272 - 443177 421 ## COG0583 Transcriptional regulator - Prom 443321 - 443380 2.8 + Prom 443250 - 443309 2.2 393 223 Op 1 3/0.483 + CDS 443353 - 444663 1438 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 394 223 Op 2 4/0.364 + CDS 444663 - 446108 1427 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 395 223 Op 3 2/0.587 + CDS 446153 - 447679 1776 ## COG2978 Putative p-aminobenzoyl-glutamate transporter 396 223 Op 4 4/0.364 + CDS 447689 - 448204 686 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Term 448273 - 448315 7.3 + Prom 448303 - 448362 4.5 397 224 Op 1 7/0.083 + CDS 448388 - 449140 966 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 449184 - 449243 3.9 398 224 Op 2 . + CDS 449277 - 450227 1020 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 450238 - 450277 9.8 - Term 450230 - 450261 5.5 399 225 Tu 1 . - CDS 450267 - 451379 1168 ## COG0668 Small-conductance mechanosensitive channel - Prom 451402 - 451461 5.2 - Term 451434 - 451472 8.1 400 226 Op 1 17/0.000 - CDS 451487 - 452875 1950 ## COG1282 NAD/NADP transhydrogenase beta subunit 401 226 Op 2 . - CDS 452886 - 454415 1535 ## COG3288 NAD/NADP transhydrogenase alpha subunit + Prom 454688 - 454747 3.1 402 227 Tu 1 . + CDS 454951 - 455895 1029 ## ECL_02265 hypothetical protein + Term 455913 - 455941 2.1 + Prom 455999 - 456058 7.6 403 228 Op 1 7/0.083 + CDS 456081 - 457463 1645 ## COG0531 Amino acid transporters 404 228 Op 2 . + CDS 457503 - 458225 577 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Term 457976 - 458015 -0.6 405 229 Tu 1 . - CDS 458222 - 458557 436 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis - Prom 458586 - 458645 5.3 + Prom 458605 - 458664 1.8 406 230 Tu 1 . + CDS 458685 - 459401 704 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 459609 - 459634 -0.5 + Prom 460353 - 460412 5.4 407 231 Tu 1 . + CDS 460597 - 460815 198 ## COG1278 Cold shock proteins + Prom 461142 - 461201 4.0 408 232 Tu 1 . + CDS 461248 - 461475 111 ## KPK_4952 hypothetical protein + Term 461556 - 461586 1.0 - Term 461573 - 461625 3.1 409 233 Tu 1 . - CDS 461632 - 462729 698 ## ROD_06201 hypothetical protein - Prom 462752 - 462811 4.0 410 234 Tu 1 . - CDS 462890 - 463324 90 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 463418 - 463477 6.8 + Prom 463809 - 463868 1.9 411 235 Op 1 . + CDS 463953 - 465251 1495 ## COG0642 Signal transduction histidine kinase + Term 465256 - 465300 5.3 412 235 Op 2 . + CDS 465326 - 466255 971 ## ECL_02272 DNA replication terminus site-binding protein - Term 466185 - 466240 5.4 413 236 Tu 1 4/0.364 - CDS 466256 - 467650 1898 ## COG0114 Fumarase - Term 467778 - 467829 4.3 414 237 Tu 1 . - CDS 467833 - 469479 475 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 469549 - 469608 5.9 + Prom 469515 - 469574 2.9 415 238 Op 1 4/0.364 + CDS 469679 - 470854 1455 ## COG1482 Phosphomannose isomerase + Term 470910 - 470943 6.1 + Prom 470858 - 470917 1.6 416 238 Op 2 . + CDS 470954 - 472480 1855 ## COG5339 Uncharacterized protein conserved in bacteria + Term 472490 - 472518 1.0 - Term 472477 - 472505 1.0 417 239 Tu 1 . - CDS 472562 - 473590 813 ## COG1609 Transcriptional regulators - Prom 473746 - 473805 4.2 + Prom 473603 - 473662 3.9 418 240 Tu 1 . + CDS 473770 - 474138 140 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 419 241 Op 1 . - CDS 474104 - 474421 279 ## ECL_01351 hypothetical protein 420 241 Op 2 . - CDS 474421 - 474660 118 ## ECL_01350 hypothetical protein - Prom 474766 - 474825 4.4 + Prom 474611 - 474670 4.8 421 242 Op 1 7/0.083 + CDS 474773 - 475135 223 ## COG2246 Predicted membrane protein 422 242 Op 2 . + CDS 475132 - 476049 555 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 476097 - 476128 3.1 423 243 Tu 1 . - CDS 476540 - 476737 61 ## 424 244 Tu 1 . + CDS 476997 - 477473 -169 ## + Term 477508 - 477554 3.7 - Term 477446 - 477495 7.4 425 245 Op 1 . - CDS 477499 - 479613 176 ## ESA_03029 hypothetical protein - Term 479617 - 479650 2.8 426 245 Op 2 . - CDS 479671 - 482148 1529 ## ECL_01345 hypothetical protein 427 245 Op 3 . - CDS 482135 - 482551 240 ## ESA_03031 hypothetical protein 428 245 Op 4 . - CDS 482514 - 482984 329 ## ECL_01343 hypothetical protein 429 245 Op 5 . - CDS 482984 - 483481 472 ## ECL_01342 hypothetical protein - Prom 483628 - 483687 3.9 - Term 483492 - 483517 -0.5 430 246 Op 1 . - CDS 483761 - 486664 1685 ## Pat9b_2114 hypothetical protein 431 246 Op 2 . - CDS 486677 - 487348 357 ## ESA_03036 hypothetical protein - Term 487365 - 487392 -0.1 432 246 Op 3 . - CDS 487406 - 488149 732 ## COG5492 Bacterial surface proteins containing Ig-like domains - Term 488169 - 488194 -0.5 433 246 Op 4 . - CDS 488213 - 488596 328 ## ECL_03189 hypothetical protein 434 246 Op 5 . - CDS 488593 - 489057 488 ## Pat9b_2119 hypothetical protein 435 246 Op 6 . - CDS 489060 - 489410 434 ## ECL_01335 hypothetical protein 436 246 Op 7 . - CDS 489407 - 489640 125 ## gi|261340346|ref|ZP_05968204.1| ArsC family protein 437 247 Op 1 . - CDS 489806 - 490186 383 ## Kvar_1802 hypothetical protein 438 247 Op 2 . - CDS 490189 - 490554 316 ## Pat9b_2122 hypothetical protein 439 247 Op 3 . - CDS 490564 - 491661 1095 ## Kvar_1800 hypothetical protein 440 247 Op 4 . - CDS 491672 - 492106 437 ## Kvar_1799 hypothetical protein 441 247 Op 5 . - CDS 492194 - 493495 1584 ## ESA_03048 hypothetical protein - Prom 493733 - 493792 5.5 442 248 Op 1 . - CDS 493813 - 494709 635 ## Kvar_1796 phage head morphogenesis protein, SPP1 gp7 family 443 248 Op 2 . - CDS 494747 - 496138 696 ## Ctu_11710 hypothetical protein 444 248 Op 3 . - CDS 496219 - 497691 1098 ## Kvar_1794 phage terminase large subunit 445 248 Op 4 . - CDS 497691 - 498293 655 ## Kvar_1793 hypothetical protein 446 248 Op 5 . - CDS 498297 - 498503 188 ## 447 248 Op 6 . - CDS 498500 - 498709 151 ## ECL_01322 hypothetical protein 448 248 Op 7 . - CDS 498804 - 499106 62 ## ECUMN_0885 putative Rz1 lytic protein from bacteriophage origin 449 248 Op 8 . - CDS 498973 - 499350 258 ## Kvar_1791 lysis protein 450 248 Op 9 . - CDS 499347 - 499826 223 ## COG4678 Muramidase (phage lambda lysozyme) 451 248 Op 10 . - CDS 499810 - 500133 271 ## KPK_2847 phage holin, lambda family - Prom 500237 - 500296 5.8 - Term 500673 - 500708 4.0 452 249 Tu 1 . - CDS 500778 - 501467 636 ## ECL_01317 phage antitermination protein Q 453 250 Tu 1 . - CDS 501577 - 502209 286 ## ECL_01316 bacteriophage lambda NinG family protein 454 251 Tu 1 . - CDS 502581 - 503036 423 ## SSON_2446 hypothetical protein - Term 503045 - 503095 7.4 455 252 Op 1 . - CDS 503215 - 503457 174 ## 456 252 Op 2 . - CDS 503454 - 503702 228 ## ECL_03215 DNA polymerase III theta subunit - Prom 503773 - 503832 3.6 - Term 503878 - 503909 0.0 457 252 Op 3 . - CDS 503918 - 504163 197 ## ECL_01311 hypothetical protein - Prom 504332 - 504391 80.4 458 253 Op 1 . + CDS 505245 - 506243 162 ## COG0582 Integrase 459 253 Op 2 3/0.483 + CDS 506297 - 507694 1697 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 507702 - 507732 3.4 460 253 Op 3 3/0.483 + CDS 507743 - 508915 1143 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 508920 - 508963 6.3 + Prom 508927 - 508986 7.7 461 254 Tu 1 . + CDS 509012 - 510013 1365 ## COG1816 Adenosine deaminase - Term 509878 - 509923 1.5 462 255 Tu 1 . - CDS 510069 - 511109 976 ## COG0673 Predicted dehydrogenases and related proteins - Prom 511326 - 511385 5.8 + Prom 511598 - 511657 4.7 463 256 Op 1 . + CDS 511703 - 511918 299 ## ECL_02304 OriC-binding nucleoid-associated protein 464 256 Op 2 . + CDS 511992 - 512444 399 ## ECL_02305 putative inner membrane protein + Term 512467 - 512511 3.1 465 257 Op 1 12/0.013 + CDS 512521 - 513102 793 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 466 257 Op 2 10/0.021 + CDS 513102 - 513680 520 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 467 257 Op 3 12/0.013 + CDS 513673 - 515694 2088 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 468 257 Op 4 12/0.013 + CDS 515695 - 516747 1313 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 469 257 Op 5 13/0.011 + CDS 516758 - 517378 702 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 470 257 Op 6 10/0.021 + CDS 517381 - 518067 855 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 471 257 Op 7 3/0.483 + CDS 518064 - 518699 645 ## COG0177 Predicted EndoIII-related endonuclease + Prom 519160 - 519219 2.6 472 258 Tu 1 . + CDS 519315 - 520823 1982 ## COG3104 Dipeptide/tripeptide permease + Term 520847 - 520884 6.4 + Prom 520846 - 520905 6.4 473 259 Tu 1 . + CDS 520929 - 521534 952 ## COG0625 Glutathione S-transferase 474 260 Op 1 5/0.231 - CDS 521595 - 522455 948 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Term 522474 - 522508 7.0 475 260 Op 2 5/0.231 - CDS 522522 - 523796 826 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Term 523863 - 523899 7.0 476 261 Op 1 3/0.483 - CDS 523922 - 524578 718 ## COG0259 Pyridoxamine-phosphate oxidase 477 261 Op 2 3/0.483 - CDS 524636 - 524959 333 ## COG3895 Predicted periplasmic protein 478 261 Op 3 . - CDS 525053 - 526177 1128 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases - Prom 526318 - 526377 3.3 + Prom 526201 - 526260 4.1 479 262 Tu 1 . + CDS 526433 - 526900 449 ## COG3133 Outer membrane lipoprotein + Term 526906 - 526957 -0.3 480 263 Tu 1 . - CDS 526950 - 527153 92 ## + Prom 527006 - 527065 7.4 481 264 Tu 1 . + CDS 527095 - 528456 799 ## COG2199 FOG: GGDEF domain + Term 528502 - 528531 -0.7 - Term 528443 - 528488 5.2 482 265 Tu 1 . - CDS 528495 - 528935 389 ## COG1846 Transcriptional regulators - Prom 528955 - 529014 5.1 + Prom 528927 - 528986 10.4 483 266 Op 1 . + CDS 529081 - 529359 198 ## ECL_02324 hypothetical protein 484 266 Op 2 6/0.121 + CDS 529449 - 530222 613 ## COG1566 Multidrug resistance efflux pump 485 266 Op 3 . + CDS 530222 - 532255 1553 ## COG1289 Predicted membrane protein + Term 532485 - 532511 1.0 486 267 Op 1 3/0.483 - CDS 532234 - 532752 510 ## COG2032 Cu/Zn superoxide dismutase 487 267 Op 2 4/0.364 - CDS 532834 - 533730 1094 ## COG4989 Predicted oxidoreductase 488 267 Op 3 . - CDS 533779 - 534102 130 ## COG3313 Predicted Fe-S protein - Prom 534136 - 534195 2.3 + Prom 534081 - 534140 4.7 489 268 Op 1 1/0.716 + CDS 534167 - 535807 1559 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 490 268 Op 2 6/0.121 + CDS 535834 - 536433 736 ## COG1309 Transcriptional regulator 491 268 Op 3 4/0.364 + CDS 536487 - 537584 1222 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 492 268 Op 4 7/0.083 + CDS 537684 - 538091 216 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase + Term 538099 - 538128 3.2 + Prom 538102 - 538161 3.4 493 269 Tu 1 . + CDS 538188 - 538847 811 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 538882 - 538917 3.2 - Term 538868 - 538903 3.2 494 270 Tu 1 . - CDS 538925 - 539272 439 ## COG0278 Glutaredoxin-related protein - Prom 539306 - 539365 4.8 + Prom 539494 - 539553 4.6 495 271 Tu 1 . + CDS 539635 - 540369 601 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 540374 - 540413 7.3 + Prom 540385 - 540444 4.1 496 272 Tu 1 . + CDS 540492 - 541073 466 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 541074 - 541120 9.3 - Term 541068 - 541103 7.4 497 273 Op 1 . - CDS 541111 - 542277 1353 ## COG2814 Arabinose efflux permease - Prom 542358 - 542417 2.7 - Term 542399 - 542430 2.5 498 273 Op 2 . - CDS 542439 - 542528 99 ## - Prom 542616 - 542675 2.8 + Prom 542622 - 542681 3.0 499 274 Tu 1 . + CDS 542826 - 543851 1150 ## COG1609 Transcriptional regulators 500 275 Tu 1 . - CDS 543869 - 544780 915 ## COG0583 Transcriptional regulator - Prom 544808 - 544867 2.3 + Prom 544802 - 544861 2.4 501 276 Tu 1 . + CDS 544963 - 546078 1379 ## COG0477 Permeases of the major facilitator superfamily + Term 546094 - 546135 -0.5 + Prom 546108 - 546167 7.4 502 277 Tu 1 . + CDS 546377 - 547525 1134 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases + Term 547531 - 547564 5.4 - Term 547519 - 547552 5.4 503 278 Tu 1 . - CDS 547557 - 548198 720 ## COG0307 Riboflavin synthase alpha chain - Prom 548311 - 548370 5.0 + Prom 548284 - 548343 5.3 504 279 Tu 1 . + CDS 548436 - 549797 1460 ## COG0534 Na+-driven multidrug efflux pump + Term 549799 - 549842 7.4 + TRNA 549951 - 550027 92.3 # Val GAC 0 0 + TRNA 550032 - 550108 96.5 # Val GAC 0 0 505 280 Tu 1 . + CDS 550348 - 550695 119 ## COG2801 Transposase and inactivated derivatives + Prom 550773 - 550832 3.1 506 281 Tu 1 . + CDS 550892 - 551476 210 ## COG3477 Predicted periplasmic/secreted protein + Prom 551738 - 551797 4.4 507 282 Tu 1 . + CDS 551821 - 552024 72 ## + Term 552026 - 552072 -0.9 + Prom 552058 - 552117 3.8 508 283 Tu 1 . + CDS 552145 - 553740 1071 ## COG4529 Uncharacterized protein conserved in bacteria + Term 553819 - 553850 -1.0 509 284 Op 1 . - CDS 553767 - 554402 670 ## COG0288 Carbonic anhydrase 510 284 Op 2 . - CDS 554475 - 555257 606 ## ECL_02349 beta-lactamase-like protein - Prom 555347 - 555406 4.0 + Prom 555294 - 555353 4.2 511 285 Tu 1 . + CDS 555383 - 555523 131 ## + Term 555525 - 555566 5.4 - Term 555519 - 555549 3.4 512 286 Tu 1 . - CDS 555581 - 556987 1170 ## ECL_02354 hypothetical protein + Prom 557466 - 557525 1.7 513 287 Op 1 16/0.000 + CDS 557545 - 558375 953 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 514 287 Op 2 34/0.000 + CDS 558377 - 559192 581 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 515 287 Op 3 17/0.000 + CDS 559192 - 559938 728 ## COG0765 ABC-type amino acid transport system, permease component 516 287 Op 4 . + CDS 559922 - 560608 649 ## COG0765 ABC-type amino acid transport system, permease component - Term 560479 - 560510 0.0 517 288 Tu 1 . - CDS 560589 - 560798 381 ## Ent638_1774 hypothetical protein - Prom 560820 - 560879 3.9 - Term 560848 - 560888 9.5 518 289 Op 1 22/0.000 - CDS 560907 - 561719 1273 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 519 289 Op 2 32/0.000 - CDS 561748 - 562416 758 ## COG2011 ABC-type metal ion transport system, permease component 520 289 Op 3 . - CDS 562409 - 563431 975 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 563477 - 563536 4.3 + Prom 563643 - 563702 6.6 521 290 Tu 1 . + CDS 563931 - 565352 1707 ## COG0469 Pyruvate kinase + Term 565386 - 565413 -0.1 + Prom 565358 - 565417 6.4 522 291 Tu 1 . + CDS 565665 - 565901 351 ## COG4238 Murein lipoprotein + Term 565920 - 565950 4.3 - Term 565908 - 565938 4.3 523 292 Tu 1 4/0.364 - CDS 565962 - 566975 815 ## COG1376 Uncharacterized protein conserved in bacteria - Term 567010 - 567044 5.8 524 293 Op 1 7/0.083 - CDS 567073 - 567489 507 ## COG2166 SufE protein probably involved in Fe-S center assembly 525 293 Op 2 24/0.000 - CDS 567504 - 568724 1476 ## COG0520 Selenocysteine lyase 526 293 Op 3 41/0.000 - CDS 568721 - 569992 1388 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 527 293 Op 4 41/0.000 - CDS 569967 - 570713 988 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 528 293 Op 5 3/0.483 - CDS 570723 - 572213 1823 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 529 293 Op 6 . - CDS 572222 - 572590 344 ## COG0316 Uncharacterized conserved protein - Prom 572623 - 572682 3.0 530 294 Tu 1 . + CDS 572579 - 572794 92 ## gi|295096077|emb|CBK85167.1| hypothetical protein ENC_13710 + Term 572821 - 572863 -0.8 531 295 Op 1 . - CDS 572912 - 573640 674 ## COG0789 Predicted transcriptional regulators - Prom 573700 - 573759 5.2 - Term 573724 - 573760 4.8 532 295 Op 2 . - CDS 573829 - 575049 1158 ## COG2200 FOG: EAL domain - Prom 575290 - 575349 60.2 + Prom 575280 - 575339 53.4 533 296 Op 1 . + CDS 575436 - 575675 269 ## ECL_02373 hypothetical protein + Prom 575946 - 576005 1.8 534 296 Op 2 . + CDS 576030 - 576308 279 ## ECL_02374 hypothetical protein 535 297 Op 1 . - CDS 576406 - 577065 280 ## ECL_02377 hypothetical protein 536 297 Op 2 . - CDS 577107 - 577619 271 ## COG3539 P pilus assembly protein, pilin FimA 537 297 Op 3 . - CDS 577631 - 578560 650 ## ECL_02379 putative fimbrial protein 538 297 Op 4 10/0.021 - CDS 578580 - 581123 2216 ## COG3188 P pilus assembly protein, porin PapC 539 297 Op 5 7/0.083 - CDS 581151 - 581828 331 ## COG3121 P pilus assembly protein, chaperone PapD - Term 581834 - 581867 5.2 540 297 Op 6 . - CDS 581885 - 582415 647 ## COG3539 P pilus assembly protein, pilin FimA - Prom 582622 - 582681 5.9 + Prom 582624 - 582683 8.0 541 298 Op 1 . + CDS 582770 - 583429 452 ## KPK_2637 cyclic nucleotide-binding domain protein 542 298 Op 2 . + CDS 583507 - 584136 464 ## Kvar_2593 Crp/Fnr family transcriptional regulator + Term 584154 - 584181 1.5 - Term 584142 - 584169 1.5 543 299 Op 1 . - CDS 584183 - 584377 307 ## ECL_02385 hypothetical protein - Prom 584401 - 584460 3.1 544 299 Op 2 6/0.121 - CDS 584463 - 584873 310 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 545 299 Op 3 . - CDS 584870 - 587926 3327 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 588004 - 588063 2.6 + Prom 587964 - 588023 4.0 546 300 Tu 1 . + CDS 588126 - 589241 1206 ## COG0628 Predicted permease - Term 589436 - 589485 7.2 547 301 Op 1 . - CDS 589564 - 591939 2498 ## COG1472 Beta-glucosidase-related glycosidases 548 301 Op 2 . - CDS 591943 - 593343 1598 ## COG2211 Na+/melibiose symporter and related transporters - Prom 593505 - 593564 5.6 - Term 593518 - 593565 12.7 549 302 Tu 1 . - CDS 593579 - 595957 3326 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 596196 - 596255 5.0 + Prom 596204 - 596263 4.9 550 303 Tu 1 . + CDS 596293 - 597126 1046 ## COG1806 Uncharacterized protein conserved in bacteria 551 304 Tu 1 . - CDS 597160 - 597378 112 ## - Prom 597478 - 597537 2.1 + Prom 597192 - 597251 2.4 552 305 Tu 1 . + CDS 597277 - 598323 1034 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 598378 - 598417 5.2 + Prom 598430 - 598489 5.0 553 306 Op 1 . + CDS 598521 - 598709 142 ## Ent638_1742 hypothetical protein 554 306 Op 2 4/0.364 + CDS 598785 - 600767 2406 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 555 306 Op 3 4/0.364 + CDS 600803 - 601831 1020 ## COG3720 Putative heme degradation protein 556 306 Op 4 8/0.053 + CDS 601828 - 602646 815 ## COG4558 ABC-type hemin transport system, periplasmic component 557 306 Op 5 10/0.021 + CDS 602709 - 603638 1054 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 558 306 Op 6 . + CDS 603631 - 604410 659 ## COG4559 ABC-type hemin transport system, ATPase component 559 307 Op 1 4/0.364 - CDS 604407 - 605849 1637 ## COG0397 Uncharacterized conserved protein 560 307 Op 2 5/0.231 - CDS 605911 - 606624 441 ## COG2200 FOG: EAL domain - Prom 606772 - 606831 5.0 - Term 606839 - 606900 5.7 561 308 Op 1 4/0.364 - CDS 606917 - 607381 282 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 562 308 Op 2 5/0.231 - CDS 607454 - 608197 616 ## COG4138 ABC-type cobalamin transport system, ATPase component 563 308 Op 3 5/0.231 - CDS 608209 - 608760 768 ## COG0386 Glutathione peroxidase - Prom 608787 - 608846 3.2 564 309 Tu 1 4/0.364 - CDS 608852 - 609832 1015 ## COG4139 ABC-type cobalamin transport system, permease component - Prom 609858 - 609917 2.5 - Term 609891 - 609918 1.5 565 310 Op 1 13/0.011 - CDS 609936 - 610235 318 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 566 310 Op 2 40/0.000 - CDS 610240 - 612627 2861 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 567 310 Op 3 13/0.011 - CDS 612643 - 613626 1332 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 613841 - 613900 2.6 - Term 613887 - 613921 5.1 568 311 Op 1 46/0.000 - CDS 613931 - 614287 578 ## PROTEIN SUPPORTED gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 569 311 Op 2 36/0.000 - CDS 614338 - 614550 358 ## PROTEIN SUPPORTED gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 - Term 614578 - 614613 1.1 570 311 Op 3 16/0.000 - CDS 614633 - 615112 663 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 571 311 Op 4 . - CDS 615179 - 617107 2082 ## COG0441 Threonyl-tRNA synthetase - Prom 617173 - 617232 2.9 572 312 Tu 1 . - CDS 617876 - 618109 278 ## Ent638_1723 hypothetical protein - Prom 618285 - 618344 9.4 - Term 618331 - 618365 7.0 573 313 Tu 1 . - CDS 618373 - 619131 722 ## COG3137 Putative salt-induced outer membrane protein - Prom 619221 - 619280 9.4 + Prom 619301 - 619360 5.5 574 314 Op 1 . + CDS 619428 - 620360 924 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 575 314 Op 2 . + CDS 620452 - 620742 370 ## ECL_02425 putative cytoplasmic protein + Prom 620769 - 620828 4.5 576 315 Tu 1 . + CDS 620848 - 621708 834 ## COG3001 Fructosamine-3-kinase + Term 621714 - 621745 0.7 577 316 Tu 1 . - CDS 621742 - 622278 578 ## ECL_02427 putative regulatory protein - Prom 622308 - 622367 1.8 + Prom 622170 - 622229 1.9 578 317 Tu 1 . + CDS 622421 - 623092 820 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 623129 - 623188 4.2 579 318 Tu 1 . + CDS 623221 - 623982 850 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 623995 - 624054 4.0 580 319 Tu 1 1/0.716 + CDS 624084 - 624674 373 ## COG1988 Predicted membrane-bound metal-dependent hydrolases + Prom 624719 - 624778 2.2 581 320 Tu 1 . + CDS 624802 - 626193 1966 ## COG1823 Predicted Na+/dicarboxylate symporter + Term 626202 - 626253 2.1 - Term 626202 - 626227 -0.5 582 321 Tu 1 . - CDS 626242 - 626481 121 ## KPN_01237 cell division modulator - Prom 626520 - 626579 2.1 + Prom 626592 - 626651 3.2 583 322 Tu 1 . + CDS 626684 - 628933 2469 ## COG0753 Catalase + Term 628999 - 629030 3.4 - Term 628975 - 629029 12.2 584 323 Op 1 5/0.231 - CDS 629050 - 629799 895 ## COG3394 Uncharacterized protein conserved in bacteria 585 323 Op 2 4/0.364 - CDS 629811 - 631166 1780 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 586 324 Op 1 5/0.231 - CDS 631276 - 632094 795 ## COG2207 AraC-type DNA-binding domain-containing proteins 587 324 Op 2 13/0.011 - CDS 632124 - 632471 479 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 588 324 Op 3 10/0.021 - CDS 632519 - 633877 1567 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 633897 - 633956 2.8 - Term 633883 - 633915 2.7 589 325 Tu 1 . - CDS 633958 - 634275 451 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 634453 - 634512 4.4 - Term 634502 - 634529 1.5 590 326 Tu 1 . - CDS 634557 - 634901 348 ## ECL_02440 DNA-binding transcriptional activator OsmE - Prom 635109 - 635168 3.1 + Prom 635036 - 635095 5.1 591 327 Op 1 4/0.364 + CDS 635133 - 635960 1175 ## COG0171 NAD synthase + Term 635988 - 636027 5.2 592 327 Op 2 . + CDS 636049 - 636954 896 ## COG0322 Nuclease subunit of the excinuclease complex + Term 637020 - 637055 0.2 - Term 636750 - 636794 -0.9 593 328 Tu 1 . - CDS 636932 - 637489 422 ## COG3758 Uncharacterized protein conserved in bacteria - Term 637573 - 637639 14.1 594 329 Tu 1 . - CDS 637657 - 638151 630 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 638354 - 638413 4.8 - Term 638382 - 638426 2.1 595 330 Op 1 5/0.231 - CDS 638488 - 639453 840 ## COG2988 Succinylglutamate desuccinylase 596 330 Op 2 7/0.083 - CDS 639463 - 640788 1547 ## COG3724 Succinylarginine dihydrolase 597 330 Op 3 8/0.053 - CDS 640775 - 642262 1506 ## COG1012 NAD-dependent aldehyde dehydrogenases 598 330 Op 4 7/0.083 - CDS 642259 - 643293 1179 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 599 330 Op 5 . - CDS 643290 - 644510 1516 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 644538 - 644597 4.9 + Prom 644858 - 644917 2.4 600 331 Op 1 . + CDS 644944 - 645750 1035 ## COG0708 Exonuclease III + Term 645784 - 645814 3.0 601 331 Op 2 . + CDS 645820 - 646440 217 ## PROTEIN SUPPORTED gi|146276129|ref|YP_001166288.1| ribosomal protein S16 602 331 Op 3 3/0.483 + CDS 646447 - 647616 1073 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 603 331 Op 4 3/0.483 + CDS 647637 - 649118 1412 ## COG4135 ABC-type uncharacterized transport system, permease component 604 331 Op 5 1/0.716 + CDS 649118 - 649738 187 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 605 331 Op 6 . + CDS 649812 - 651119 1379 ## COG2897 Rhodanese-related sulfurtransferase 606 332 Op 1 . - CDS 651116 - 651733 920 ## COG0558 Phosphatidylglycerophosphate synthase 607 332 Op 2 . - CDS 651723 - 652265 552 ## COG2128 Uncharacterized conserved protein - Prom 652351 - 652410 2.3 + Prom 652288 - 652347 2.8 608 333 Tu 1 . + CDS 652371 - 652787 472 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 609 334 Tu 1 . - CDS 652747 - 653019 271 ## ECL_02459 hypothetical protein + Prom 653129 - 653188 4.6 610 335 Tu 1 . + CDS 653245 - 654588 1679 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Term 654783 - 654820 1.3 611 336 Op 1 . - CDS 654878 - 655273 292 ## COG2149 Predicted membrane protein 612 336 Op 2 1/0.716 - CDS 655254 - 656138 760 ## COG1737 Transcriptional regulators - Term 656155 - 656188 -0.3 613 336 Op 3 . - CDS 656195 - 657052 487 ## COG2017 Galactose mutarotase and related enzymes 614 336 Op 4 . - CDS 657057 - 658805 1380 ## COG3119 Arylsulfatase A and related enzymes 615 336 Op 5 . - CDS 658819 - 660354 1524 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 660386 - 660445 6.4 + Prom 660371 - 660430 7.2 616 337 Op 1 . + CDS 660507 - 661721 626 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Prom 661732 - 661791 3.0 617 337 Op 2 . + CDS 661835 - 663136 1094 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 663144 - 663199 4.1 - Term 662982 - 663023 0.3 618 338 Op 1 5/0.231 - CDS 663188 - 665095 2286 ## COG0550 Topoisomerase IA 619 338 Op 2 6/0.121 - CDS 665100 - 666143 1482 ## COG0709 Selenophosphate synthase - Prom 666165 - 666224 2.1 620 339 Tu 1 . - CDS 666260 - 666811 612 ## COG0778 Nitroreductase - Prom 666836 - 666895 2.9 + Prom 666811 - 666870 3.2 621 340 Op 1 4/0.364 + CDS 666979 - 668835 2233 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 668841 - 668878 7.1 622 340 Op 2 2/0.587 + CDS 668898 - 669914 1414 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 623 340 Op 3 . + CDS 669924 - 670565 753 ## COG1335 Amidases related to nicotinamidase + Term 670575 - 670616 7.4 + Prom 670569 - 670628 3.5 624 341 Tu 1 . + CDS 670791 - 672044 1535 ## COG3325 Chitinase + Term 672108 - 672142 5.1 - Term 671987 - 672018 -0.7 625 342 Op 1 3/0.483 - CDS 672089 - 672361 420 ## COG3139 Uncharacterized protein conserved in bacteria 626 342 Op 2 . - CDS 672403 - 672816 360 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Prom 672924 - 672983 4.6 627 343 Op 1 4/0.364 + CDS 673158 - 674153 1079 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 674180 - 674208 1.0 628 343 Op 2 . + CDS 674228 - 675112 863 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase + Term 675142 - 675171 3.5 - Term 675126 - 675164 7.2 629 344 Tu 1 . - CDS 675181 - 675927 887 ## COG3713 Outer membrane protein V - Prom 676147 - 676206 4.3 + Prom 676141 - 676200 2.5 630 345 Op 1 12/0.013 + CDS 676360 - 678294 2523 ## COG2766 Putative Ser protein kinase 631 345 Op 2 . + CDS 678351 - 679652 944 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 + Term 679663 - 679704 -0.4 - Term 679851 - 679880 0.4 632 346 Tu 1 . - CDS 679910 - 680230 67 ## ECL_01351 hypothetical protein + Prom 680022 - 680081 2.0 633 347 Tu 1 . + CDS 680218 - 680457 264 ## + Term 680487 - 680520 0.8 634 348 Tu 1 . - CDS 681808 - 682041 129 ## Rahaq_4504 hypothetical protein - Prom 682061 - 682120 2.1 635 349 Op 1 . - CDS 682149 - 682820 214 ## Rahaq_4505 hypothetical protein 636 349 Op 2 . - CDS 682821 - 683135 108 ## gi|295096329|emb|CBK85419.1| hypothetical protein ENC_17020 - Term 683143 - 683176 2.0 637 349 Op 3 5/0.231 - CDS 683179 - 687024 1826 ## COG4733 Phage-related protein, tail component - Term 687029 - 687057 1.0 638 350 Op 1 6/0.121 - CDS 687077 - 687664 158 ## COG4723 Phage-related protein, tail component 639 350 Op 2 6/0.121 - CDS 687664 - 688374 609 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 640 350 Op 3 5/0.231 - CDS 688377 - 689135 233 ## COG4672 Phage-related protein 641 350 Op 4 6/0.121 - CDS 689132 - 689470 298 ## COG4718 Phage-related protein 642 350 Op 5 . - CDS 689473 - 692937 1286 ## COG5281 Phage-related minor tail protein 643 350 Op 6 . - CDS 692996 - 693307 160 ## 644 350 Op 7 . - CDS 693342 - 693620 278 ## APECO1_1015 phage-related minor tail protein 645 350 Op 8 . - CDS 693629 - 694012 412 ## APECO1_1016 putative tail assembly chaperone 646 350 Op 9 . - CDS 694021 - 694464 530 ## Z1908 putative tail component of prophage CP-933X 647 351 Op 1 . - CDS 694868 - 695317 272 ## Ent638_2232 HK97 family phage protein 648 351 Op 2 . - CDS 695314 - 695652 122 ## COG5614 Bacteriophage head-tail adaptor 649 351 Op 3 . - CDS 695652 - 695978 278 ## PMI0928 phage protein 650 351 Op 4 . - CDS 696012 - 697169 1367 ## PMI0927 major capsid protein 651 351 Op 5 3/0.483 - CDS 697172 - 697861 470 ## COG3740 Phage head maturation protease 652 351 Op 6 2/0.587 - CDS 697867 - 699141 315 ## COG4695 Phage-related protein 653 351 Op 7 . - CDS 699141 - 700655 914 ## COG4626 Phage terminase-like protein, large subunit 654 351 Op 8 . - CDS 700662 - 701147 303 ## XBJ1_2042 terminase small subunit - Prom 701184 - 701243 2.2 655 352 Op 1 . - CDS 701331 - 701534 166 ## gi|332344513|gb|AEE57847.1| hypothetical protein UMNK88_3297 656 352 Op 2 . - CDS 701534 - 701875 225 ## COG1403 Restriction endonuclease 657 352 Op 3 . - CDS 701872 - 702462 301 ## Ent638_2242 hypothetical protein 658 352 Op 4 . - CDS 702444 - 703901 618 ## ECL_01682 hypothetical protein - Prom 704093 - 704152 6.4 + Prom 704021 - 704080 4.6 659 353 Tu 1 . + CDS 704139 - 704624 243 ## xccb100_1044 hypothetical protein + Term 704633 - 704664 2.4 660 354 Op 1 . - CDS 704642 - 704866 169 ## ECL_01681 hypothetical protein 661 354 Op 2 . - CDS 704787 - 705059 250 ## ECL_01680 hypothetical protein - Prom 705082 - 705141 1.8 662 355 Op 1 . - CDS 705559 - 705774 60 ## ECSE_2231 hypothetical protein 663 355 Op 2 . - CDS 705837 - 706241 87 ## ECSE_2232 hypothetical protein - Term 706281 - 706309 1.0 664 355 Op 3 . - CDS 706321 - 706890 135 ## DP1715 hypothetical protein - Prom 706922 - 706981 5.4 - Term 706950 - 706979 -0.9 665 356 Op 1 . - CDS 707034 - 707612 394 ## Ent638_2613 hypothetical protein 666 356 Op 2 . - CDS 707625 - 708206 108 ## Ent638_2614 hypothetical protein - Prom 708408 - 708467 2.0 + Prom 707990 - 708049 1.6 667 357 Tu 1 . + CDS 708246 - 708470 62 ## - Term 708525 - 708577 5.2 668 358 Op 1 . - CDS 708611 - 709267 535 ## COG3645 Uncharacterized phage-encoded protein 669 358 Op 2 . - CDS 709352 - 709555 197 ## COG4570 Holliday junction resolvase 670 359 Op 1 . - CDS 709776 - 710831 114 ## COG0270 Site-specific DNA methylase 671 359 Op 2 . - CDS 710828 - 711487 367 ## COG4725 Transcriptional activator, adenine-specific DNA methyltransferase 672 359 Op 3 . - CDS 711487 - 711690 60 ## - Prom 711898 - 711957 2.2 673 360 Op 1 . - CDS 711978 - 712931 364 ## SeD_A2284 hypothetical protein 674 360 Op 2 . - CDS 712915 - 713100 99 ## gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 - Prom 713180 - 713239 2.3 - Term 713124 - 713177 2.1 675 361 Op 1 . - CDS 713264 - 713824 188 ## EFER_4425 nucleic acid-binding protein; E14 prophage 676 361 Op 2 . - CDS 713847 - 714098 135 ## APECO1_1042 putative regulatory protein - Prom 714123 - 714182 2.9 + Prom 713917 - 713976 3.4 677 362 Tu 1 . + CDS 714133 - 714885 323 ## COG2932 Predicted transcriptional regulator + Prom 714918 - 714977 3.5 678 363 Op 1 . + CDS 715046 - 715294 121 ## Rahaq_4543 HicA protein 679 363 Op 2 . + CDS 715287 - 715745 95 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 680 363 Op 3 . + CDS 715745 - 716158 208 ## + Term 716164 - 716199 5.1 + Prom 716161 - 716220 5.4 681 364 Tu 1 . + CDS 716244 - 716600 222 ## ETA_24170 hypothetical protein 682 365 Tu 1 . - CDS 716636 - 716845 98 ## ECL_03589 hypothetical protein - Prom 716867 - 716926 6.3 + Prom 717354 - 717413 2.4 683 366 Op 1 . + CDS 717618 - 717977 212 ## Ent638_2622 hypothetical protein 684 366 Op 2 . + CDS 717977 - 718804 617 ## Ent638_2623 hypothetical protein 685 366 Op 3 . + CDS 718801 - 719337 211 ## ECDH10B_1333 hypothetical protein 686 366 Op 4 . + CDS 719373 - 719636 102 ## Rahaq_1777 hypothetical protein + Prom 719898 - 719957 4.5 687 367 Tu 1 . + CDS 720070 - 720753 -145 ## COG0582 Integrase + Term 720879 - 720912 6.1 + Prom 720756 - 720815 7.1 688 368 Tu 1 . + CDS 720973 - 721473 569 ## COG2606 Uncharacterized conserved protein + Term 721480 - 721512 3.8 689 369 Tu 1 . - CDS 721494 - 721616 110 ## - Prom 721735 - 721794 5.6 + Prom 721677 - 721736 3.6 690 370 Op 1 3/0.483 + CDS 721883 - 723214 1385 ## COG2211 Na+/melibiose symporter and related transporters 691 370 Op 2 . + CDS 723230 - 725266 2162 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Prom 725286 - 725345 3.1 692 371 Tu 1 . + CDS 725373 - 725819 601 ## COG2707 Predicted membrane protein 693 372 Tu 1 . - CDS 725803 - 726594 698 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 726618 - 726677 4.8 + Prom 726612 - 726671 1.8 694 373 Tu 1 . + CDS 726694 - 727881 1086 ## COG2807 Cyanate permease + Term 727890 - 727919 2.1 - Term 727878 - 727907 2.1 695 374 Tu 1 . - CDS 727912 - 728619 753 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 728660 - 728719 3.6 + Prom 728654 - 728713 3.6 696 375 Tu 1 . + CDS 728771 - 729115 347 ## COG3189 Uncharacterized conserved protein - Term 728990 - 729025 0.2 697 376 Op 1 . - CDS 729116 - 729421 263 ## ECL_02488 hypothetical protein 698 376 Op 2 . - CDS 729502 - 729756 188 ## COG3042 Putative hemolysin - Prom 729782 - 729841 1.9 + Prom 729965 - 730024 5.9 699 377 Tu 1 . + CDS 730071 - 731099 1014 ## COG2203 FOG: GAF domain - Term 731321 - 731351 2.1 700 378 Tu 1 . - CDS 731372 - 731620 361 ## COG2261 Predicted membrane protein - Prom 731662 - 731721 4.1 701 379 Tu 1 . + CDS 732208 - 733707 830 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains 702 380 Op 1 . - CDS 733712 - 733957 373 ## ECUMN_1601 hypothetical protein - Term 733977 - 734008 3.2 703 380 Op 2 . - CDS 734033 - 735283 1710 ## COG0538 Isocitrate dehydrogenases - Prom 735344 - 735403 5.1 + Prom 735350 - 735409 6.1 704 381 Op 1 3/0.483 + CDS 735431 - 736063 576 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 705 381 Op 2 6/0.121 + CDS 736063 - 736536 505 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 706 381 Op 3 4/0.364 + CDS 736577 - 737689 1461 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 707 381 Op 4 9/0.034 + CDS 737717 - 738346 609 ## COG2915 Uncharacterized protein involved in purine metabolism 708 381 Op 5 . + CDS 738366 - 739736 1827 ## COG0015 Adenylosuccinate lyase + Term 739745 - 739782 7.8 709 382 Tu 1 . - CDS 739824 - 740216 264 ## CKO_02909 hypothetical protein - Prom 740299 - 740358 5.3 + Prom 740517 - 740576 4.0 710 383 Op 1 40/0.000 + CDS 740601 - 741272 930 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 711 383 Op 2 2/0.587 + CDS 741273 - 742736 1264 ## COG0642 Signal transduction histidine kinase + Term 742757 - 742799 -1.0 + Prom 742742 - 742801 2.6 712 383 Op 3 . + CDS 742828 - 743949 1225 ## COG2850 Uncharacterized conserved protein + Term 744004 - 744043 5.2 - Term 743989 - 744031 -0.4 713 384 Tu 1 . - CDS 744035 - 744526 441 ## COG1943 Transposase and inactivated derivatives 714 385 Tu 1 . - CDS 744627 - 745850 1450 ## COG2195 Di- and tripeptidases - Prom 745964 - 746023 2.8 + Prom 745975 - 746034 2.8 715 386 Op 1 30/0.000 + CDS 746151 - 747236 1087 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 716 386 Op 2 36/0.000 + CDS 747220 - 748077 1205 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 717 386 Op 3 25/0.000 + CDS 748074 - 748865 904 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 718 386 Op 4 . + CDS 748862 - 749896 1564 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 749904 - 749936 5.4 719 387 Op 1 5/0.231 - CDS 749931 - 750752 785 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 720 387 Op 2 5/0.231 - CDS 750767 - 751678 259 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 721 387 Op 3 23/0.000 - CDS 751733 - 752914 1426 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 722 387 Op 4 23/0.000 - CDS 752977 - 753678 230 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 723 387 Op 5 . - CDS 753671 - 754831 1479 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Prom 754897 - 754956 6.0 + Prom 754898 - 754957 2.6 724 388 Tu 1 . + CDS 755127 - 756200 1100 ## COG4763 Predicted membrane protein + Term 756208 - 756238 3.0 + Prom 756225 - 756284 2.5 725 389 Tu 1 . + CDS 756346 - 759792 4259 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 759850 - 759909 4.9 726 390 Tu 1 . + CDS 759936 - 760901 910 ## COG1376 Uncharacterized protein conserved in bacteria + Term 760914 - 760956 7.6 - Term 760907 - 760939 5.0 727 391 Tu 1 . - CDS 760979 - 761236 301 ## ECL_02524 hypothetical protein - Prom 761346 - 761405 8.2 + Prom 761325 - 761384 8.6 728 392 Tu 1 . + CDS 761482 - 762117 490 ## COG1309 Transcriptional regulator + Term 762212 - 762263 0.8 - Term 762117 - 762155 5.3 729 393 Tu 1 . - CDS 762177 - 762704 552 ## COG3134 Predicted outer membrane lipoprotein - Prom 762741 - 762800 2.7 - Term 762869 - 762903 6.7 730 394 Tu 1 . - CDS 762912 - 764216 1613 ## COG1252 NADH dehydrogenase, FAD-containing subunit - Prom 764242 - 764301 5.2 - Term 764394 - 764433 10.5 731 395 Op 1 2/0.587 - CDS 764453 - 764995 599 ## COG3150 Predicted esterase 732 395 Op 2 5/0.231 - CDS 765027 - 766040 963 ## COG1472 Beta-glucosidase-related glycosidases 733 395 Op 3 6/0.121 - CDS 766064 - 766630 573 ## COG0510 Predicted choline kinase involved in LPS biosynthesis - Term 766765 - 766820 10.0 734 396 Op 1 6/0.121 - CDS 766869 - 767504 593 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 735 396 Op 2 4/0.364 - CDS 767527 - 767901 353 ## COG5633 Predicted periplasmic lipoprotein 736 396 Op 3 . - CDS 767903 - 768262 412 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 768339 - 768398 2.2 + Prom 768460 - 768519 5.2 737 397 Tu 1 . + CDS 768616 - 770805 2682 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 770908 - 770937 2.8 - Term 770895 - 770925 3.0 738 398 Tu 1 . - CDS 770947 - 772380 1597 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 772491 - 772550 4.3 - Term 772589 - 772629 6.0 739 399 Op 1 10/0.021 - CDS 772678 - 773472 888 ## COG0084 Mg-dependent DNase 740 399 Op 2 22/0.000 - CDS 773483 - 774487 794 ## COG0470 ATPase involved in DNA replication 741 399 Op 3 10/0.021 - CDS 774484 - 775125 888 ## COG0125 Thymidylate kinase 742 399 Op 4 6/0.121 - CDS 775115 - 776128 888 ## COG1559 Predicted periplasmic solute-binding protein 743 399 Op 5 5/0.231 - CDS 776140 - 776949 409 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 777001 - 777060 3.6 - Term 777014 - 777042 -0.3 744 400 Op 1 27/0.000 - CDS 777071 - 778276 1121 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 778325 - 778384 3.1 - Term 778359 - 778392 6.1 745 400 Op 2 22/0.000 - CDS 778404 - 778640 384 ## COG0236 Acyl carrier protein - Prom 778679 - 778738 4.9 746 400 Op 3 26/0.000 - CDS 778795 - 779529 254 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 747 400 Op 4 14/0.008 - CDS 779542 - 780471 950 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 748 400 Op 5 16/0.000 - CDS 780487 - 781440 1035 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 749 400 Op 6 14/0.008 - CDS 781447 - 782451 535 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 750 401 Op 1 20/0.000 - CDS 782563 - 782736 288 ## PROTEIN SUPPORTED gi|146311260|ref|YP_001176334.1| 50S ribosomal protein L32 751 401 Op 2 . - CDS 782753 - 783274 419 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein - Prom 783362 - 783421 3.1 + Prom 783326 - 783385 3.8 752 402 Tu 1 . + CDS 783457 - 783999 507 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 753 403 Tu 1 . - CDS 784061 - 785008 1051 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 785108 - 785167 2.2 754 404 Tu 1 . + CDS 785579 - 788695 3120 ## COG1530 Ribonucleases G and E + Term 788710 - 788747 7.1 - Term 788702 - 788731 2.8 755 405 Tu 1 . - CDS 788736 - 789689 534 ## COG0583 Transcriptional regulator - Prom 789743 - 789802 4.4 756 406 Tu 1 . + CDS 789784 - 790998 1438 ## COG0477 Permeases of the major facilitator superfamily + Term 791023 - 791055 -0.9 - Term 790991 - 791031 8.5 757 407 Op 1 21/0.000 - CDS 791075 - 792028 940 ## COG1344 Flagellin and related hook-associated proteins 758 407 Op 2 9/0.034 - CDS 792045 - 793685 1654 ## COG1256 Flagellar hook-associated protein 759 407 Op 3 7/0.083 - CDS 793761 - 794714 1111 ## COG3951 Rod binding protein 760 407 Op 4 9/0.034 - CDS 794715 - 795812 1383 ## COG1706 Flagellar basal-body P-ring protein 761 407 Op 5 9/0.034 - CDS 795825 - 796523 830 ## COG2063 Flagellar basal body L-ring protein - Term 796532 - 796580 7.3 762 408 Op 1 8/0.053 - CDS 796581 - 797363 923 ## COG4786 Flagellar basal body rod protein 763 408 Op 2 8/0.053 - CDS 797375 - 798130 731 ## COG4787 Flagellar basal body rod protein 764 408 Op 3 16/0.000 - CDS 798151 - 799359 1534 ## COG1749 Flagellar hook protein FlgE 765 408 Op 4 9/0.034 - CDS 799386 - 800096 879 ## COG1843 Flagellar hook capping protein 766 408 Op 5 24/0.000 - CDS 800108 - 800512 433 ## COG1558 Flagellar basal body rod protein 767 408 Op 6 . - CDS 800516 - 800932 469 ## COG1815 Flagellar basal body protein - Prom 800959 - 801018 2.4 768 409 Op 1 8/0.053 + CDS 801075 - 801749 383 ## COG1261 Flagellar basal body P-ring biosynthesis protein 769 409 Op 2 7/0.083 + CDS 801843 - 802136 306 ## COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 770 409 Op 3 . + CDS 802141 - 802566 422 ## COG3418 Flagellar biosynthesis/type III secretory pathway chaperone + Term 802591 - 802628 2.5 - Term 802578 - 802616 1.1 771 410 Tu 1 5/0.231 - CDS 802626 - 804161 1045 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 - Term 804199 - 804240 3.5 772 411 Op 1 4/0.364 - CDS 804291 - 805214 890 ## COG0673 Predicted dehydrogenases and related proteins 773 411 Op 2 5/0.231 - CDS 805217 - 805867 858 ## COG3132 Uncharacterized protein conserved in bacteria 774 411 Op 3 . - CDS 805878 - 806462 996 ## PROTEIN SUPPORTED gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase - Prom 806561 - 806620 6.4 775 412 Op 1 . + CDS 806699 - 807907 1397 ## COG0477 Permeases of the major facilitator superfamily + Term 807964 - 807997 2.1 + Prom 807911 - 807970 1.7 776 412 Op 2 . + CDS 808007 - 808567 825 ## ECL_02575 hypothetical protein + Term 808572 - 808605 5.2 + Prom 808587 - 808646 5.8 777 413 Op 1 . + CDS 808696 - 809742 1026 ## COG0418 Dihydroorotase 778 413 Op 2 . + CDS 809817 - 810062 290 ## ECL_02577 DNA damage-inducible protein I + Term 810089 - 810116 1.5 + Prom 810212 - 810271 6.4 779 414 Tu 1 . + CDS 810337 - 810591 274 ## ECL_02578 biofilm formation regulatory protein BssS + Term 810617 - 810647 1.0 + Prom 810605 - 810664 2.6 780 415 Op 1 . + CDS 810707 - 811825 1150 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 811836 - 811867 2.4 781 415 Op 2 . + CDS 811876 - 811989 64 ## + Prom 812111 - 812170 7.3 782 416 Op 1 12/0.013 + CDS 812216 - 812782 557 ## COG3038 Cytochrome B561 783 416 Op 2 . + CDS 812784 - 813362 656 ## COG2353 Uncharacterized conserved protein + Term 813368 - 813408 6.7 - Term 813356 - 813394 7.1 784 417 Tu 1 . - CDS 813401 - 814450 1048 ## COG1054 Predicted sulfurtransferase - Prom 814488 - 814547 7.9 + Prom 814447 - 814506 5.1 785 418 Tu 1 . + CDS 814669 - 815595 876 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 815599 - 815635 7.1 + Prom 815627 - 815686 3.3 786 419 Op 1 . + CDS 815737 - 816972 1319 ## COG0477 Permeases of the major facilitator superfamily 787 419 Op 2 . + CDS 817052 - 817426 534 ## Ent638_1567 hypothetical protein - Term 817158 - 817184 -1.0 788 420 Tu 1 4/0.364 - CDS 817434 - 817661 305 ## COG5645 Predicted periplasmic lipoprotein - Term 817668 - 817699 1.7 789 421 Op 1 7/0.083 - CDS 817724 - 820222 2967 ## COG2943 Membrane glycosyltransferase 790 421 Op 2 . - CDS 820245 - 821780 1820 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 821838 - 821897 4.1 + Prom 821749 - 821808 4.2 791 422 Tu 1 . + CDS 822054 - 823193 1186 ## Ent638_1563 glucans biosynthesis protein + Term 823199 - 823229 4.1 - Term 823181 - 823224 8.1 792 423 Op 1 . - CDS 823235 - 823771 476 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 793 423 Op 2 . - CDS 823853 - 824173 287 ## ECL_02596 hypothetical protein - Prom 824270 - 824329 2.9 794 424 Tu 1 . - CDS 824334 - 824666 245 ## ECL_02597 curli production protein - Term 824674 - 824702 1.0 795 425 Op 1 . - CDS 824722 - 825177 404 ## ECUMN_1216 cryptic curlin major subunit 796 425 Op 2 . - CDS 825217 - 825672 258 ## Ent638_1557 curlin minor subunit - Prom 825751 - 825810 4.8 797 426 Op 1 . + CDS 826418 - 827068 386 ## COG2771 DNA-binding HTH domain-containing proteins 798 426 Op 2 . + CDS 827073 - 827462 240 ## Ent638_1555 curli assembly protein CsgE 799 426 Op 3 . + CDS 827519 - 827905 241 ## CKO_02031 curli assembly protein CsgF 800 426 Op 4 . + CDS 827932 - 828765 948 ## COG1462 Uncharacterized protein involved in formation of curli polymers + Term 828775 - 828823 12.3 - Term 828770 - 828803 2.1 801 427 Op 1 . - CDS 828809 - 829291 443 ## Ent638_1552 hypothetical protein 802 427 Op 2 5/0.231 - CDS 829388 - 829942 725 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 803 427 Op 3 3/0.483 - CDS 829962 - 830699 1021 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family - Prom 830719 - 830778 2.6 - Term 830747 - 830781 3.9 804 428 Tu 1 . - CDS 830784 - 831722 1031 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + TRNA 831952 - 832039 68.6 # Ser GGA 0 0 - Term 831939 - 832007 31.2 805 429 Tu 1 . - CDS 832188 - 833093 640 ## COG0583 Transcriptional regulator - Prom 833143 - 833202 5.7 + Prom 833102 - 833161 3.0 806 430 Op 1 2/0.587 + CDS 833203 - 834063 937 ## COG1741 Pirin-related protein 807 430 Op 2 . + CDS 834084 - 834761 921 ## COG1335 Amidases related to nicotinamidase + Term 834803 - 834843 -0.9 + TRNA 834899 - 834986 68.6 # Ser GGA 0 0 - Term 835178 - 835210 4.1 808 431 Tu 1 . - CDS 835227 - 836732 765 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 836908 - 836967 4.8 - Term 837088 - 837124 7.1 809 432 Op 1 . - CDS 837150 - 837941 690 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 810 432 Op 2 . - CDS 837920 - 838036 62 ## gi|291085604|ref|ZP_06571122.1| protein PhoH - Term 838396 - 838441 9.1 811 433 Op 1 9/0.034 - CDS 838442 - 839725 1488 ## COG2837 Predicted iron-dependent peroxidase 812 433 Op 2 7/0.083 - CDS 839729 - 840856 1631 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 813 433 Op 3 . - CDS 840897 - 841730 1135 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 841896 - 841955 3.4 + Prom 841851 - 841910 3.5 814 434 Tu 1 . + CDS 841982 - 843166 1457 ## COG1972 Nucleoside permease + Term 843204 - 843233 3.5 - Term 843186 - 843227 5.7 815 435 Op 1 . - CDS 843228 - 843647 467 ## Ent638_1543 putative lipoprotein 816 435 Op 2 . - CDS 843720 - 845228 2213 ## COG0591 Na+/proline symporter - Prom 845321 - 845380 3.0 + Prom 845515 - 845574 4.1 817 436 Op 1 . + CDS 845651 - 849613 5642 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase + Term 849625 - 849660 6.7 818 436 Op 2 . + CDS 849665 - 850066 531 ## COG3755 Uncharacterized protein conserved in bacteria + Term 850145 - 850179 8.3 - Term 850228 - 850264 8.7 819 437 Tu 1 . - CDS 850282 - 850920 800 ## COG1309 Transcriptional regulator + Prom 851075 - 851134 4.5 820 438 Op 1 4/0.364 + CDS 851166 - 852257 1508 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 821 438 Op 2 2/0.587 + CDS 852257 - 852946 885 ## COG1335 Amidases related to nicotinamidase 822 438 Op 3 5/0.231 + CDS 852958 - 853344 492 ## COG0251 Putative translation initiation inhibitor, yjgF family 823 438 Op 4 4/0.364 + CDS 853352 - 854152 809 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 824 438 Op 5 5/0.231 + CDS 854162 - 854752 711 ## COG0778 Nitroreductase 825 438 Op 6 1/0.716 + CDS 854762 - 855256 353 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 826 438 Op 7 . + CDS 855278 - 856600 738 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 856607 - 856653 14.7 827 439 Op 1 9/0.034 - CDS 856659 - 857159 338 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 828 439 Op 2 . - CDS 857187 - 857399 139 ## COG4453 Uncharacterized protein conserved in bacteria 829 440 Tu 1 . - CDS 857530 - 858435 960 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 858458 - 858517 3.7 + Prom 858889 - 858948 4.0 830 441 Op 1 . + CDS 859113 - 859709 691 ## COG0655 Multimeric flavodoxin WrbA 831 441 Op 2 . + CDS 859728 - 859955 452 ## ECL_02632 hypothetical protein + Term 859961 - 859992 5.5 - Term 859921 - 859973 -1.0 832 442 Tu 1 . - CDS 859988 - 861229 1609 ## ECL_02633 acid glucose-1-phosphate phosphatase precursor 833 443 Tu 1 . - CDS 861334 - 861918 495 ## COG0586 Uncharacterized membrane-associated protein 834 444 Tu 1 . + CDS 862222 - 863223 1249 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 863232 - 863267 6.7 - TRNA 863266 - 863353 76.4 # Ser TGA 0 0 + Prom 863460 - 863519 7.4 835 445 Tu 1 . + CDS 863730 - 864134 311 ## gi|295096289|emb|CBK85379.1| Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 864014 - 864048 -0.9 836 446 Tu 1 . - CDS 864166 - 865779 1660 ## COG0668 Small-conductance mechanosensitive channel - Prom 865928 - 865987 3.8 + Prom 865869 - 865928 4.7 837 447 Op 1 33/0.000 + CDS 865953 - 866960 484 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 838 447 Op 2 35/0.000 + CDS 867011 - 867988 947 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 839 447 Op 3 . + CDS 867985 - 868821 524 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components + Term 868924 - 868959 3.2 - TRNA 868808 - 868895 76.4 # Ser TGA 0 0 - Term 868755 - 868803 12.2 840 448 Tu 1 . - CDS 869040 - 870668 2080 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 870826 - 870885 4.2 + Prom 870851 - 870910 2.8 841 449 Op 1 2/0.587 + CDS 870939 - 871598 955 ## COG0670 Integral membrane protein, interacts with FtsH + Term 871612 - 871655 6.8 + Prom 871603 - 871662 3.5 842 449 Op 2 . + CDS 871687 - 872016 539 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Term 871972 - 872002 0.7 843 450 Tu 1 . - CDS 872013 - 872294 353 ## COG1254 Acylphosphatases - Prom 872377 - 872436 2.1 844 451 Op 1 3/0.483 + CDS 872388 - 873578 589 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 845 451 Op 2 . + CDS 873639 - 873956 385 ## COG3785 Uncharacterized conserved protein + Term 873961 - 874001 2.3 - Term 873957 - 873983 1.0 846 452 Tu 1 . - CDS 873989 - 874402 645 ## COG1832 Predicted CoA-binding protein - Prom 874496 - 874555 1.7 847 453 Op 1 . + CDS 874401 - 874535 59 ## 848 453 Op 2 3/0.483 + CDS 874574 - 875236 478 ## COG3110 Uncharacterized protein conserved in bacteria 849 453 Op 3 . + CDS 875317 - 875775 398 ## COG1803 Methylglyoxal synthase 850 454 Tu 1 . - CDS 875830 - 877908 1744 ## COG0210 Superfamily I DNA and RNA helicases - Prom 877953 - 878012 2.7 + Prom 877917 - 877976 4.2 851 455 Op 1 5/0.231 + CDS 878007 - 878453 548 ## COG3304 Predicted membrane protein 852 455 Op 2 . + CDS 878472 - 880634 2208 ## COG1289 Predicted membrane protein + Term 880647 - 880689 -0.5 853 456 Tu 1 . - CDS 880591 - 881217 473 ## COG3070 Regulator of competence-specific genes + Prom 881348 - 881407 3.7 854 457 Tu 1 . + CDS 881435 - 881944 304 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation + Term 882111 - 882162 1.4 + Prom 882088 - 882147 12.1 855 458 Tu 1 . + CDS 882301 - 883353 902 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 883366 - 883407 8.0 - Term 883360 - 883388 2.1 856 459 Tu 1 . - CDS 883418 - 883870 540 ## COG3120 Uncharacterized protein conserved in bacteria - Prom 883896 - 883955 3.9 + Prom 883970 - 884029 5.2 857 460 Op 1 8/0.053 + CDS 884231 - 885817 1439 ## COG1067 Predicted ATP-dependent protease 858 460 Op 2 . + CDS 885886 - 886404 839 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Term 886434 - 886469 4.5 - Term 886834 - 886882 10.1 859 461 Op 1 8/0.053 - CDS 886898 - 887464 576 ## COG3009 Uncharacterized protein conserved in bacteria 860 461 Op 2 11/0.017 - CDS 887461 - 889101 1695 ## COG3008 Paraquat-inducible protein B 861 461 Op 3 5/0.231 - CDS 889106 - 890359 839 ## COG2995 Uncharacterized paraquat-inducible protein A 862 461 Op 4 6/0.121 - CDS 890373 - 892265 2422 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 863 461 Op 5 . - CDS 892293 - 894401 2576 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 894428 - 894487 6.4 + Prom 894396 - 894455 3.9 864 462 Tu 1 . + CDS 894542 - 895609 909 ## COG3217 Uncharacterized Fe-S protein 865 463 Tu 1 . - CDS 895606 - 896148 480 ## Ent638_1458 hypothetical protein - Prom 896198 - 896257 4.6 - Term 896253 - 896298 9.6 866 464 Tu 1 . - CDS 896315 - 897325 1002 ## COG0167 Dihydroorotate dehydrogenase - Prom 897528 - 897587 11.8 867 465 Op 1 4/0.364 + CDS 897575 - 898150 634 ## COG0431 Predicted flavoprotein 868 465 Op 2 5/0.231 + CDS 898143 - 899105 1110 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 869 465 Op 3 8/0.053 + CDS 899102 - 900247 1323 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 870 465 Op 4 24/0.000 + CDS 900257 - 901048 952 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 871 465 Op 5 . + CDS 901045 - 901815 747 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 872 466 Tu 1 . - CDS 901867 - 904479 3352 ## COG0308 Aminopeptidase N - Prom 904585 - 904644 3.8 + Prom 904627 - 904686 4.9 873 467 Tu 1 . + CDS 904734 - 905936 1186 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 905944 - 905978 5.0 + Prom 905987 - 906046 6.3 874 468 Tu 1 . + CDS 906104 - 907504 1830 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases + Term 907517 - 907557 6.2 875 469 Tu 1 . + CDS 908110 - 909168 1496 ## COG3203 Outer membrane protein (porin) + Term 909198 - 909231 3.8 + Prom 909174 - 909233 8.7 876 470 Tu 1 . + CDS 909354 - 910544 1694 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 910562 - 910592 1.0 - Term 910550 - 910578 1.4 877 471 Op 1 7/0.083 - CDS 910597 - 911244 659 ## COG0491 Zn-dependent hydrolases, including glyoxylases 878 471 Op 2 9/0.034 - CDS 911265 - 911816 384 ## COG3108 Uncharacterized protein conserved in bacteria - Prom 911865 - 911924 3.5 879 472 Tu 1 4/0.364 - CDS 911992 - 913815 1554 ## COG2989 Uncharacterized protein conserved in bacteria - Prom 913904 - 913963 7.9 - Term 913945 - 913978 4.3 880 473 Op 1 8/0.053 - CDS 913995 - 918443 5724 ## COG3096 Uncharacterized protein involved in chromosome partitioning 881 473 Op 2 7/0.083 - CDS 918443 - 919147 922 ## COG3095 Uncharacterized protein involved in chromosome partitioning 882 473 Op 3 6/0.121 - CDS 919128 - 920450 1488 ## COG3006 Uncharacterized protein involved in chromosome partitioning 883 473 Op 4 . - CDS 920454 - 921233 600 ## COG0500 SAM-dependent methyltransferases - Prom 921351 - 921410 4.2 + Prom 921196 - 921255 1.5 884 474 Tu 1 . + CDS 921354 - 922133 807 ## COG1434 Uncharacterized conserved protein + Term 922355 - 922391 -0.4 885 475 Tu 1 . - CDS 922110 - 923003 926 ## ECL_02735 hypothetical protein - Prom 923032 - 923091 2.6 - Term 923093 - 923128 2.2 886 476 Op 1 11/0.017 - CDS 923148 - 923894 898 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 887 476 Op 2 4/0.364 - CDS 923891 - 924073 232 ## COG2835 Uncharacterized conserved protein 888 476 Op 3 4/0.364 - CDS 924119 - 925348 936 ## COG3214 Uncharacterized protein conserved in bacteria 889 476 Op 4 9/0.034 - CDS 925392 - 926369 841 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 890 476 Op 5 5/0.231 - CDS 926366 - 928114 294 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 891 476 Op 6 2/0.587 - CDS 928151 - 930415 1095 ## COG0658 Predicted membrane metal-binding protein - Prom 930520 - 930579 3.6 - Term 930563 - 930596 3.1 892 477 Op 1 16/0.000 - CDS 930628 - 930915 340 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 930987 - 931046 3.1 - Term 930951 - 930987 5.3 893 477 Op 2 21/0.000 - CDS 931086 - 932759 2786 ## PROTEIN SUPPORTED gi|157146403|ref|YP_001453721.1| 30S ribosomal protein S1 894 477 Op 3 7/0.083 - CDS 932871 - 933554 651 ## COG0283 Cytidylate kinase - Prom 933593 - 933652 4.2 - Term 933698 - 933731 5.4 895 478 Op 1 6/0.121 - CDS 933740 - 935023 1460 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 935042 - 935076 5.0 896 478 Op 2 4/0.364 - CDS 935092 - 936144 1331 ## COG1932 Phosphoserine aminotransferase - Prom 936201 - 936260 2.9 - Term 936291 - 936335 1.0 897 479 Tu 1 . - CDS 936343 - 937035 660 ## COG2323 Predicted membrane protein - Prom 937063 - 937122 2.0 + Prom 937019 - 937078 2.8 898 480 Tu 1 . + CDS 937163 - 938923 2557 ## COG1944 Uncharacterized conserved protein + Term 938942 - 938980 3.0 899 481 Op 1 7/0.083 + CDS 939330 - 940187 797 ## COG2116 Formate/nitrite family of transporters 900 481 Op 2 11/0.017 + CDS 940239 - 942521 2712 ## COG1882 Pyruvate-formate lyase + Term 942564 - 942595 3.2 + Prom 942579 - 942638 3.9 901 482 Tu 1 . + CDS 942725 - 943465 942 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 943472 - 943504 5.0 - Term 943459 - 943491 5.0 902 483 Tu 1 . - CDS 943502 - 944017 464 ## ECL_02752 hypothetical protein - Prom 944044 - 944103 4.9 - Term 944102 - 944130 2.3 903 484 Op 1 . - CDS 944141 - 945289 1315 ## COG0477 Permeases of the major facilitator superfamily - Prom 945465 - 945524 9.3 - Term 945509 - 945542 1.1 904 484 Op 2 . - CDS 945564 - 946397 1022 ## COG3302 DMSO reductase anchor subunit - Prom 946529 - 946588 80.3 905 485 Op 1 16/0.000 - CDS 946590 - 946904 398 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 906 485 Op 2 2/0.587 - CDS 946915 - 949359 2704 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 949477 - 949536 5.3 - Term 949523 - 949548 -0.5 907 486 Tu 1 8/0.053 - CDS 949572 - 950864 1452 ## COG0172 Seryl-tRNA synthetase - Term 950889 - 950921 3.1 908 487 Op 1 8/0.053 - CDS 950957 - 952243 1153 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Term 952271 - 952302 -0.8 909 487 Op 2 10/0.021 - CDS 952310 - 952924 714 ## COG2834 Outer membrane lipoprotein-sorting protein 910 488 Tu 1 . - CDS 953052 - 956714 3437 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Term 956750 - 956793 12.2 911 489 Tu 1 . - CDS 956850 - 957344 566 ## COG1522 Transcriptional regulators + Prom 957658 - 957717 3.7 912 490 Tu 1 . + CDS 957888 - 958856 722 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 958884 - 958920 7.3 + Prom 958876 - 958935 4.8 913 491 Op 1 14/0.008 + CDS 958971 - 960737 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 914 491 Op 2 5/0.231 + CDS 960737 - 962458 233 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 915 491 Op 3 5/0.231 + CDS 962504 - 963208 449 ## COG2360 Leu/Phe-tRNA-protein transferase + Term 963397 - 963430 3.4 + Prom 963398 - 963457 3.1 916 492 Tu 1 . + CDS 963493 - 963711 261 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Term 963746 - 963783 9.1 - Term 963733 - 963770 9.1 917 493 Op 1 . - CDS 963973 - 964284 151 ## 918 493 Op 2 . - CDS 964208 - 964645 232 ## Ent638_1400 hypothetical protein - Prom 964787 - 964846 7.9 - Term 965083 - 965110 1.5 919 494 Op 1 19/0.000 - CDS 965132 - 967411 1357 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 920 494 Op 2 . - CDS 967439 - 967759 311 ## COG2127 Uncharacterized conserved protein - Prom 967923 - 967982 2.9 + Prom 967880 - 967939 4.7 921 495 Tu 1 . + CDS 968027 - 968248 186 ## COG1278 Cold shock proteins + Term 968278 - 968321 7.6 - Term 968271 - 968304 4.1 922 496 Op 1 13/0.011 - CDS 968319 - 970259 370 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 923 496 Op 2 . - CDS 970256 - 971371 1432 ## COG0845 Membrane-fusion protein - Prom 971391 - 971450 2.3 + Prom 971350 - 971409 6.9 924 497 Tu 1 . + CDS 971531 - 972487 903 ## COG2990 Uncharacterized protein conserved in bacteria + Term 972494 - 972537 -0.4 925 498 Tu 1 . - CDS 972484 - 974142 1390 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 974266 - 974325 3.9 + Prom 974256 - 974315 1.6 926 499 Tu 1 . + CDS 974338 - 975129 920 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 975198 - 975237 5.2 + Prom 975187 - 975246 4.1 927 500 Tu 1 . + CDS 975306 - 976205 1014 ## COG2431 Predicted membrane protein + Prom 976258 - 976317 1.6 928 501 Op 1 2/0.587 + CDS 976350 - 978002 2327 ## COG1151 6Fe-6S prismane cluster-containing protein 929 501 Op 2 5/0.231 + CDS 978013 - 978981 936 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 979003 - 979042 8.1 + Prom 979862 - 979921 2.9 930 502 Op 1 5/0.231 + CDS 979949 - 981667 1942 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 931 502 Op 2 4/0.364 + CDS 981706 - 982707 1382 ## COG2008 Threonine aldolase 932 502 Op 3 4/0.364 + CDS 982718 - 984154 1341 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Prom 984160 - 984219 2.7 933 502 Op 4 . + CDS 984247 - 985260 1151 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 985341 - 985383 5.2 - Term 985327 - 985371 10.2 934 503 Tu 1 . - CDS 985374 - 987206 1954 ## COG3979 Uncharacterized protein contain chitin-binding domain type 3 - Prom 987228 - 987287 4.3 - Term 987233 - 987280 4.2 935 504 Tu 1 . - CDS 987341 - 987652 314 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 987825 - 987884 4.3 - Term 987825 - 987876 11.7 936 505 Op 1 . - CDS 987886 - 990597 2767 ## COG3325 Chitinase - Prom 990672 - 990731 2.3 - Term 990777 - 990821 -0.6 937 505 Op 2 . - CDS 990857 - 991654 622 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 938 505 Op 3 . - CDS 991651 - 992136 332 ## CKO_02219 hypothetical protein 939 505 Op 4 4/0.364 - CDS 992133 - 993266 1086 ## COG3297 Type II secretory pathway, component PulL 940 505 Op 5 7/0.083 - CDS 993282 - 994292 1078 ## COG3156 Type II secretory pathway, component PulK 941 505 Op 6 12/0.013 - CDS 994289 - 994909 557 ## COG4795 Type II secretory pathway, component PulJ 942 505 Op 7 12/0.013 - CDS 994951 - 995331 515 ## COG2165 Type II secretory pathway, pseudopilin PulG 943 505 Op 8 12/0.013 - CDS 995324 - 995809 463 ## COG2165 Type II secretory pathway, pseudopilin PulG 944 505 Op 9 10/0.021 - CDS 995809 - 996258 588 ## COG2165 Type II secretory pathway, pseudopilin PulG 945 505 Op 10 24/0.000 - CDS 996262 - 997470 1513 ## COG1459 Type II secretory pathway, component PulF 946 505 Op 11 6/0.121 - CDS 997470 - 998948 1790 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 947 505 Op 12 . - CDS 998963 - 1000885 2298 ## COG1450 Type II secretory pathway, component PulD 948 505 Op 13 . - CDS 1000899 - 1001630 506 ## COG3031 Type II secretory pathway, component PulC + Prom 1001837 - 1001896 1.8 949 506 Op 1 . + CDS 1001931 - 1003493 1541 ## CKO_02233 hypothetical protein 950 506 Op 2 . + CDS 1003493 - 1004140 516 ## ECL_02802 hypothetical protein + Term 1004195 - 1004232 -0.8 - Term 1004082 - 1004126 11.6 951 507 Tu 1 . - CDS 1004137 - 1004760 449 ## ECL_02803 hypothetical protein - Prom 1004780 - 1004839 5.6 - Term 1004965 - 1005012 3.3 952 508 Op 1 4/0.364 - CDS 1005026 - 1005856 623 ## COG3023 Negative regulator of beta-lactamase expression 953 508 Op 2 . - CDS 1005853 - 1006176 511 ## COG0393 Uncharacterized conserved protein - Prom 1006211 - 1006270 3.6 + Prom 1006189 - 1006248 6.6 954 509 Tu 1 . + CDS 1006274 - 1006792 678 ## ECL_02806 putative lipoprotein + Term 1006826 - 1006866 5.6 + Prom 1006917 - 1006976 4.5 955 510 Op 1 7/0.083 + CDS 1007019 - 1007747 484 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 956 510 Op 2 12/0.013 + CDS 1007766 - 1008497 1202 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 957 510 Op 3 12/0.013 + CDS 1008504 - 1009220 939 ## COG4215 ABC-type arginine transport system, permease component 958 510 Op 4 4/0.364 + CDS 1009220 - 1009888 1046 ## COG4160 ABC-type arginine/histidine transport system, permease component + Term 1009918 - 1009958 8.1 + Prom 1009906 - 1009965 7.0 959 511 Tu 1 . + CDS 1010001 - 1010795 1145 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 960 512 Op 1 40/0.000 - CDS 1010871 - 1012340 1534 ## COG0642 Signal transduction histidine kinase 961 512 Op 2 1/0.716 - CDS 1012324 - 1013031 895 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1013056 - 1013115 2.6 962 513 Op 1 . - CDS 1013144 - 1014280 1230 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 963 513 Op 2 . - CDS 1014321 - 1014794 477 ## ROD_08641 hypothetical protein - Term 1014806 - 1014838 6.3 964 514 Op 1 36/0.000 - CDS 1014861 - 1015706 1059 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 965 514 Op 2 30/0.000 - CDS 1015703 - 1016656 1330 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 966 514 Op 3 13/0.011 - CDS 1016666 - 1017799 1327 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Term 1017813 - 1017845 1.2 967 515 Tu 1 . - CDS 1017903 - 1019015 1693 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 1019157 - 1019216 3.2 968 516 Op 1 . - CDS 1019365 - 1019841 445 ## ECL_02820 putative sensory transduction regulator 969 516 Op 2 4/0.364 - CDS 1019905 - 1020828 1404 ## PROTEIN SUPPORTED gi|218548371|ref|YP_002382162.1| ribosomal protein S6 modification protein 970 516 Op 3 . - CDS 1020872 - 1021594 1004 ## COG0778 Nitroreductase - Prom 1021626 - 1021685 4.0 971 517 Tu 1 . + CDS 1021780 - 1022049 436 ## COG0695 Glutaredoxin and related proteins + Term 1022053 - 1022093 7.3 - Term 1022046 - 1022076 2.6 972 518 Tu 1 . - CDS 1022080 - 1022391 154 ## ECL_02824 putative inner membrane protein + Prom 1022514 - 1022573 3.5 973 519 Tu 1 . + CDS 1022729 - 1024414 2027 ## COG2985 Predicted permease + Term 1024423 - 1024471 10.5 + Prom 1024537 - 1024596 5.5 974 520 Tu 1 . + CDS 1024761 - 1025360 207 ## Plut_0837 hypothetical protein 975 521 Tu 1 . + CDS 1025493 - 1025705 79 ## + Prom 1025774 - 1025833 3.7 976 522 Tu 1 . + CDS 1025853 - 1027574 829 ## Ent638_1341 hypothetical protein + Term 1027585 - 1027643 4.1 + Prom 1027837 - 1027896 4.9 977 523 Tu 1 . + CDS 1027952 - 1028383 429 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 978 524 Tu 1 . - CDS 1028404 - 1028955 584 ## COG3226 Uncharacterized protein conserved in bacteria 979 525 Op 1 2/0.587 + CDS 1028891 - 1030252 1528 ## COG0477 Permeases of the major facilitator superfamily 980 525 Op 2 . + CDS 1030242 - 1031054 959 ## COG0561 Predicted hydrolases of the HAD superfamily 981 526 Tu 1 . - CDS 1031121 - 1032353 1760 ## COG0477 Permeases of the major facilitator superfamily - Prom 1032378 - 1032437 4.0 + Prom 1032368 - 1032427 2.9 982 527 Op 1 1/0.716 + CDS 1032521 - 1033249 573 ## COG3907 PAP2 (acid phosphatase) superfamily protein 983 527 Op 2 4/0.364 + CDS 1033257 - 1033865 897 ## COG0671 Membrane-associated phospholipid phosphatase + Term 1033888 - 1033924 10.3 984 528 Tu 1 . + CDS 1033933 - 1034691 756 ## COG1349 Transcriptional regulators of sugar metabolism 985 529 Tu 1 . - CDS 1034777 - 1036003 1538 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 1036172 - 1036231 2.9 + Prom 1036100 - 1036159 5.5 986 530 Tu 1 . + CDS 1036226 - 1036852 889 ## COG0625 Glutathione S-transferase 987 531 Tu 1 . - CDS 1036853 - 1037971 1363 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 1037995 - 1038054 2.8 - Term 1038044 - 1038073 2.8 988 532 Tu 1 . - CDS 1038079 - 1038462 519 ## ECL_02883 biofilm formation regulatory protein BssR - Prom 1038492 - 1038551 6.1 + Prom 1038471 - 1038530 4.3 989 533 Tu 1 . + CDS 1038680 - 1040005 1336 ## PROTEIN SUPPORTED gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase + Term 1040031 - 1040065 2.9 990 534 Op 1 49/0.000 - CDS 1040117 - 1040986 1119 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 991 534 Op 2 38/0.000 - CDS 1041030 - 1041950 1135 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 992 534 Op 3 11/0.017 - CDS 1041956 - 1043494 2227 ## COG0747 ABC-type dipeptide transport system, periplasmic component 993 534 Op 4 3/0.483 - CDS 1043518 - 1045389 819 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 994 534 Op 5 . - CDS 1045401 - 1046339 976 ## COG1446 Asparaginase - Prom 1046411 - 1046470 5.2 + Prom 1046335 - 1046394 2.7 995 535 Op 1 9/0.034 + CDS 1046529 - 1047761 1559 ## COG0303 Molybdopterin biosynthesis enzyme 996 535 Op 2 . + CDS 1047763 - 1048515 729 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Term 1048518 - 1048561 6.3 - Term 1048506 - 1048546 7.1 997 536 Tu 1 . - CDS 1048605 - 1049267 1002 ## COG0176 Transaldolase - Prom 1049331 - 1049390 3.5 + Prom 1049316 - 1049375 2.1 998 537 Op 1 11/0.017 + CDS 1049395 - 1050294 970 ## COG1180 Pyruvate-formate lyase-activating enzyme 999 537 Op 2 2/0.587 + CDS 1050299 - 1052731 3318 ## COG1882 Pyruvate-formate lyase + Term 1052783 - 1052822 5.2 + Prom 1052814 - 1052873 3.7 1000 538 Tu 1 . + CDS 1052898 - 1053713 1060 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 1053765 - 1053824 4.3 1001 539 Tu 1 . + CDS 1053865 - 1055121 1522 ## ECL_02898 hypothetical protein + Term 1055367 - 1055405 -0.9 1002 540 Tu 1 . - CDS 1055118 - 1056191 1056 ## COG1609 Transcriptional regulators - Prom 1056218 - 1056277 3.0 + Prom 1056220 - 1056279 3.3 1003 541 Op 1 2/0.587 + CDS 1056478 - 1057779 1714 ## COG0477 Permeases of the major facilitator superfamily 1004 541 Op 2 . + CDS 1057797 - 1060160 3190 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 1060212 - 1060260 0.2 - Term 1060200 - 1060234 8.3 1005 542 Tu 1 . - CDS 1060254 - 1061825 2274 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 1061927 - 1061986 5.8 + Prom 1061954 - 1062013 5.7 1006 543 Tu 1 . + CDS 1062072 - 1062992 1266 ## COG1376 Uncharacterized protein conserved in bacteria + Term 1063013 - 1063042 3.5 - Term 1063001 - 1063030 3.5 1007 544 Op 1 1/0.716 - CDS 1063037 - 1063753 961 ## COG2188 Transcriptional regulators 1008 544 Op 2 8/0.053 - CDS 1063768 - 1065063 1426 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 1009 544 Op 3 . - CDS 1065142 - 1066518 1832 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 1066589 - 1066648 3.5 - Term 1066618 - 1066657 6.3 1010 545 Op 1 3/0.483 - CDS 1066801 - 1068324 466 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 1011 545 Op 2 19/0.000 - CDS 1068324 - 1069895 1984 ## COG0477 Permeases of the major facilitator superfamily 1012 545 Op 3 . - CDS 1069892 - 1070986 1322 ## COG1566 Multidrug resistance efflux pump 1013 546 Op 1 4/0.364 - CDS 1071088 - 1072197 1283 ## COG0471 Di- and tricarboxylate transporters 1014 546 Op 2 . - CDS 1072194 - 1072667 532 ## COG1321 Mn-dependent transcriptional regulator - Prom 1072712 - 1072771 4.8 + Prom 1072979 - 1073038 5.5 1015 547 Tu 1 . + CDS 1073249 - 1074832 1862 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 1075265 - 1075314 8.5 1016 548 Tu 1 . - CDS 1075329 - 1075847 535 ## COG3637 Opacity protein and related surface antigens - Prom 1076043 - 1076102 4.0 + Prom 1075935 - 1075994 5.1 1017 549 Tu 1 . + CDS 1076202 - 1077089 936 ## COG5006 Predicted permease, DMT superfamily + Prom 1077123 - 1077182 5.5 1018 550 Tu 1 . + CDS 1077388 - 1077891 752 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 1077914 - 1077944 4.1 1019 551 Op 1 31/0.000 + CDS 1078253 - 1078996 1147 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 1079022 - 1079063 2.4 + Prom 1079003 - 1079062 2.5 1020 551 Op 2 34/0.000 + CDS 1079090 - 1079749 982 ## COG0765 ABC-type amino acid transport system, permease component 1021 551 Op 3 3/0.483 + CDS 1079746 - 1080468 585 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 1080481 - 1080512 3.2 + Prom 1080501 - 1080560 4.3 1022 552 Tu 1 . + CDS 1080589 - 1082799 2091 ## COG0668 Small-conductance mechanosensitive channel + Term 1082976 - 1083020 0.5 1023 553 Tu 1 . - CDS 1082845 - 1083756 1021 ## COG3129 Predicted SAM-dependent methyltransferase - Prom 1083989 - 1084048 3.0 + Prom 1083907 - 1083966 3.2 1024 554 Tu 1 . + CDS 1083999 - 1084262 330 ## ECL_02926 hypothetical protein + Prom 1084299 - 1084358 2.2 1025 555 Tu 1 . + CDS 1084386 - 1084652 265 ## COG1734 DnaK suppressor protein + Term 1084765 - 1084797 -0.9 + Prom 1084765 - 1084824 3.5 1026 556 Tu 1 . + CDS 1084938 - 1085198 371 ## Ent638_1291 hypothetical protein + Term 1085283 - 1085316 5.2 1027 557 Tu 1 . - CDS 1085315 - 1086184 1032 ## COG0547 Anthranilate phosphoribosyltransferase - Prom 1086388 - 1086447 7.4 + Prom 1086403 - 1086462 4.2 1028 558 Tu 1 7/0.083 + CDS 1086534 - 1087070 428 ## COG3539 P pilus assembly protein, pilin FimA + Term 1087083 - 1087130 11.1 1029 559 Op 1 10/0.021 + CDS 1087140 - 1087814 591 ## COG3121 P pilus assembly protein, chaperone PapD 1030 559 Op 2 6/0.121 + CDS 1087835 - 1090384 2620 ## COG3188 P pilus assembly protein, porin PapC 1031 559 Op 3 4/0.364 + CDS 1090406 - 1091395 780 ## COG3539 P pilus assembly protein, pilin FimA 1032 559 Op 4 . + CDS 1091401 - 1091904 366 ## COG3539 P pilus assembly protein, pilin FimA + Term 1091935 - 1091976 9.6 - Term 1091677 - 1091711 1.3 1033 560 Op 1 1/0.716 - CDS 1091891 - 1094068 2468 ## COG1199 Rad3-related DNA helicases - Prom 1094095 - 1094154 5.2 - Term 1094124 - 1094161 4.5 1034 560 Op 2 . - CDS 1094166 - 1095548 1829 ## COG0513 Superfamily II DNA and RNA helicases - Prom 1095635 - 1095694 3.3 + Prom 1095665 - 1095724 4.8 1035 561 Op 1 15/0.006 + CDS 1095753 - 1096430 778 ## COG1309 Transcriptional regulator 1036 561 Op 2 10/0.021 + CDS 1096427 - 1097422 1340 ## COG0845 Membrane-fusion protein 1037 561 Op 3 45/0.000 + CDS 1097415 - 1099154 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1038 561 Op 4 22/0.000 + CDS 1099144 - 1100277 1480 ## COG0842 ABC-type multidrug transport system, permease component 1039 561 Op 5 . + CDS 1100334 - 1101440 1271 ## COG0842 ABC-type multidrug transport system, permease component 1040 562 Tu 1 . - CDS 1101402 - 1101812 555 ## ROD_07911 hypothetical protein - Prom 1102023 - 1102082 2.9 1041 563 Op 1 8/0.053 + CDS 1101946 - 1102707 828 ## COG3568 Metal-dependent hydrolase 1042 563 Op 2 5/0.231 + CDS 1102704 - 1103942 1238 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 1043 563 Op 3 . + CDS 1103942 - 1104904 1386 ## COG0392 Predicted integral membrane protein - Term 1104896 - 1104934 9.5 1044 564 Op 1 5/0.231 - CDS 1104982 - 1105689 1097 ## COG0670 Integral membrane protein, interacts with FtsH 1045 564 Op 2 21/0.000 - CDS 1105748 - 1106200 548 ## COG0314 Molybdopterin converting factor, large subunit 1046 564 Op 3 11/0.017 - CDS 1106202 - 1106447 391 ## COG1977 Molybdopterin converting factor, small subunit 1047 564 Op 4 11/0.017 - CDS 1106440 - 1106925 667 ## COG0315 Molybdenum cofactor biosynthesis enzyme 1048 564 Op 5 6/0.121 - CDS 1106929 - 1107441 731 ## COG0521 Molybdopterin biosynthesis enzymes 1049 564 Op 6 . - CDS 1107466 - 1108455 1075 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 1108640 - 1108699 4.3 + Prom 1108598 - 1108657 4.8 1050 565 Tu 1 . + CDS 1108803 - 1109711 971 ## COG0391 Uncharacterized conserved protein 1051 566 Tu 1 . - CDS 1110270 - 1112285 2752 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 1112318 - 1112377 4.6 + Prom 1112907 - 1112966 2.5 1052 567 Tu 1 . + CDS 1113035 - 1113757 548 ## COG0410 ABC-type branched-chain amino acid transport systems, ATPase component 1053 568 Op 1 9/0.034 - CDS 1113720 - 1114436 708 ## COG0132 Dethiobiotin synthetase 1054 568 Op 2 6/0.121 - CDS 1114414 - 1115169 478 ## COG0500 SAM-dependent methyltransferases 1055 568 Op 3 12/0.013 - CDS 1115153 - 1116310 1070 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 1056 568 Op 4 . - CDS 1116307 - 1117347 1308 ## COG0502 Biotin synthase and related enzymes - Prom 1117379 - 1117438 5.3 1057 569 Op 1 4/0.364 + CDS 1117416 - 1118723 1404 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1058 569 Op 2 . + CDS 1118772 - 1119248 659 ## COG1881 Phospholipid-binding protein + Term 1119462 - 1119494 1.4 - Term 1119242 - 1119281 5.2 1059 570 Op 1 6/0.121 - CDS 1119335 - 1120855 2055 ## COG2986 Histidine ammonia-lyase 1060 570 Op 2 . - CDS 1120852 - 1122540 1922 ## COG2987 Urocanate hydratase - Prom 1122577 - 1122636 5.5 - Term 1122568 - 1122605 -0.9 1061 571 Op 1 1/0.716 - CDS 1122668 - 1123402 776 ## COG2188 Transcriptional regulators 1062 571 Op 2 7/0.083 - CDS 1123422 - 1124360 733 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 1063 571 Op 3 . - CDS 1124357 - 1125580 992 ## COG1228 Imidazolonepropionase and related amidohydrolases - Prom 1125668 - 1125727 5.8 + Prom 1125649 - 1125708 5.5 1064 572 Tu 1 . + CDS 1125804 - 1127087 1190 ## COG4677 Pectin methylesterase + Term 1127157 - 1127185 1.0 - Term 1127130 - 1127182 5.7 1065 573 Tu 1 . - CDS 1127191 - 1128186 1056 ## COG2706 3-carboxymuconate cyclase - Prom 1128215 - 1128274 1.7 + Prom 1128213 - 1128272 2.8 1066 574 Tu 1 . + CDS 1128306 - 1129124 909 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 1129371 - 1129406 -0.8 1067 575 Op 1 13/0.011 - CDS 1129125 - 1130183 1204 ## COG4148 ABC-type molybdate transport system, ATPase component 1068 575 Op 2 23/0.000 - CDS 1130183 - 1130875 656 ## COG4149 ABC-type molybdate transport system, permease component 1069 575 Op 3 . - CDS 1130872 - 1131648 946 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 1131676 - 1131735 5.4 - Term 1131784 - 1131814 3.3 1070 576 Tu 1 . - CDS 1131827 - 1131979 89 ## Ent638_1253 hypothetical protein - Prom 1132001 - 1132060 3.4 1071 577 Op 1 4/0.364 + CDS 1132107 - 1132895 914 ## COG2005 N-terminal domain of molybdenum-binding protein 1072 577 Op 2 . + CDS 1132963 - 1134435 1547 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA + Term 1134441 - 1134469 3.0 + Prom 1134547 - 1134606 3.9 1073 578 Op 1 3/0.483 + CDS 1134637 - 1135653 1228 ## COG1087 UDP-glucose 4-epimerase 1074 578 Op 2 8/0.053 + CDS 1135663 - 1136709 1111 ## COG1085 Galactose-1-phosphate uridylyltransferase 1075 578 Op 3 6/0.121 + CDS 1136713 - 1137861 1291 ## COG0153 Galactokinase 1076 578 Op 4 4/0.364 + CDS 1137855 - 1138898 322 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase + Term 1138975 - 1139005 1.0 + Prom 1139081 - 1139140 5.3 1077 579 Tu 1 . + CDS 1139172 - 1139924 1232 ## COG0588 Phosphoglycerate mutase 1 + Term 1139946 - 1139975 2.1 - Term 1139915 - 1139984 6.1 1078 580 Tu 1 . - CDS 1139986 - 1141038 1183 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 1141079 - 1141138 4.5 1079 581 Op 1 . + CDS 1141340 - 1141702 348 ## Ent638_1244 hypothetical protein + Term 1141715 - 1141759 7.2 + Prom 1141720 - 1141779 9.0 1080 581 Op 2 . + CDS 1141802 - 1142740 793 ## COG1230 Co/Zn/Cd efflux system component + Term 1142748 - 1142786 7.6 1081 582 Op 1 5/0.231 - CDS 1142737 - 1143456 921 ## COG3201 Nicotinamide mononucleotide transporter 1082 582 Op 2 6/0.121 - CDS 1143479 - 1144513 1039 ## COG0379 Quinolinate synthase - Prom 1144545 - 1144604 5.2 - TRNA 1144753 - 1144828 99.5 # Lys TTT 0 0 - TRNA 1144860 - 1144935 99.5 # Lys TTT 0 0 - TRNA 1145077 - 1145152 99.5 # Lys TTT 0 0 - TRNA 1145156 - 1145231 91.5 # Val TAC 0 0 - TRNA 1145259 - 1145334 99.5 # Lys TTT 0 0 1083 583 Op 1 13/0.011 - CDS 1145496 - 1146284 725 ## COG1729 Uncharacterized protein conserved in bacteria 1084 583 Op 2 20/0.000 - CDS 1146294 - 1146815 527 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 1085 583 Op 3 8/0.053 - CDS 1146850 - 1148142 1003 ## COG0823 Periplasmic component of the Tol biopolymer transport system - Prom 1148178 - 1148237 3.6 1086 584 Tu 1 . - CDS 1148272 - 1149366 960 ## COG3064 Membrane protein involved in colicin uptake 1087 585 Op 1 30/0.000 - CDS 1149551 - 1149979 361 ## COG0848 Biopolymer transport protein 1088 585 Op 2 13/0.011 - CDS 1149983 - 1150666 816 ## COG0811 Biopolymer transport proteins 1089 585 Op 3 7/0.083 - CDS 1150672 - 1150962 87 ## COG0824 Predicted thioesterase - Prom 1151131 - 1151190 2.5 - Term 1151167 - 1151203 4.6 1090 586 Op 1 . - CDS 1151224 - 1151514 271 ## COG3790 Predicted membrane protein 1091 586 Op 2 . - CDS 1151514 - 1151627 134 ## 1092 586 Op 3 31/0.000 - CDS 1151642 - 1152781 1505 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 1093 586 Op 4 . - CDS 1152797 - 1154365 2111 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 1154541 - 1154600 6.8 - Term 1154992 - 1155030 7.8 1094 587 Op 1 2/0.587 - CDS 1155036 - 1157681 2311 ## COG0383 Alpha-mannosidase 1095 587 Op 2 . - CDS 1157705 - 1159624 2183 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 1159758 - 1159817 3.6 + Prom 1159707 - 1159766 4.5 1096 588 Tu 1 . + CDS 1159803 - 1160519 805 ## COG2188 Transcriptional regulators + Term 1160634 - 1160663 -0.2 1097 589 Op 1 . + CDS 1160850 - 1162805 1974 ## COG2015 Alkyl sulfatase and related hydrolases 1098 589 Op 2 . + CDS 1162870 - 1163793 995 ## Rmet_1758 hypothetical protein 1099 589 Op 3 . + CDS 1163807 - 1164580 803 ## PFL_2855 hypothetical protein - Term 1164575 - 1164603 3.0 1100 590 Op 1 39/0.000 - CDS 1164665 - 1165534 1089 ## COG0074 Succinyl-CoA synthetase, alpha subunit 1101 590 Op 2 6/0.121 - CDS 1165534 - 1166700 1566 ## COG0045 Succinyl-CoA synthetase, beta subunit 1102 590 Op 3 21/0.000 - CDS 1166786 - 1168012 1721 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 1103 590 Op 4 5/0.231 - CDS 1168027 - 1170834 3353 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Term 1170935 - 1170986 1.9 1104 591 Op 1 36/0.000 - CDS 1171073 - 1171789 603 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 1105 591 Op 2 22/0.000 - CDS 1171805 - 1173571 2273 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 1106 591 Op 3 24/0.000 - CDS 1173571 - 1173918 522 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 1107 591 Op 4 . - CDS 1173912 - 1174316 291 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 1174470 - 1174529 5.5 + Prom 1174868 - 1174927 4.2 1108 592 Tu 1 . + CDS 1174955 - 1176238 1691 ## COG0372 Citrate synthase + Term 1176303 - 1176345 6.2 - Term 1176292 - 1176333 5.2 1109 593 Op 1 3/0.483 - CDS 1176336 - 1177127 695 ## COG0266 Formamidopyrimidine-DNA glycosylase 1110 593 Op 2 8/0.053 - CDS 1177146 - 1177886 643 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 1111 593 Op 3 21/0.000 - CDS 1177873 - 1178805 888 ## COG1984 Allophanate hydrolase subunit 2 1112 593 Op 4 4/0.364 - CDS 1178799 - 1179455 473 ## COG2049 Allophanate hydrolase subunit 1 1113 593 Op 5 1/0.716 - CDS 1179470 - 1180213 969 ## COG0327 Uncharacterized conserved protein 1114 593 Op 6 . - CDS 1180224 - 1181636 1021 ## COG0415 Deoxyribodipyrimidine photolyase - Prom 1181700 - 1181759 3.9 - Term 1182176 - 1182208 1.3 1115 594 Tu 1 . - CDS 1182238 - 1182444 297 ## Ent638_1211 putative periplasmic protein - Prom 1182602 - 1182661 5.4 + Prom 1182611 - 1182670 13.6 1116 595 Op 1 20/0.000 + CDS 1182844 - 1184523 1939 ## COG2060 K+-transporting ATPase, A chain 1117 595 Op 2 18/0.000 + CDS 1184542 - 1186590 2546 ## COG2216 High-affinity K+ transport system, ATPase chain B 1118 595 Op 3 15/0.006 + CDS 1186603 - 1187178 657 ## COG2156 K+-transporting ATPase, c chain 1119 595 Op 4 16/0.000 + CDS 1187179 - 1189866 2785 ## COG2205 Osmosensitive K+ channel histidine kinase 1120 595 Op 5 2/0.587 + CDS 1189863 - 1190540 448 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1121 596 Op 1 10/0.021 + CDS 1191179 - 1193377 2458 ## COG1982 Arginine/lysine/ornithine decarboxylases 1122 596 Op 2 . + CDS 1193392 - 1194687 1785 ## COG0531 Amino acid transporters + Term 1194732 - 1194776 8.2 - Term 1194727 - 1194758 4.1 1123 597 Op 1 6/0.121 - CDS 1194831 - 1196471 1978 ## COG0033 Phosphoglucomutase 1124 597 Op 2 . - CDS 1196496 - 1197041 490 ## COG3057 Negative regulator of replication initiationR - Prom 1197177 - 1197236 5.4 + Prom 1197010 - 1197069 2.1 1125 598 Tu 1 . + CDS 1197224 - 1197997 680 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 1198007 - 1198059 1.5 + Prom 1198014 - 1198073 3.7 1126 599 Tu 1 . + CDS 1198126 - 1198413 330 ## KP1_1661 LexA regulated protein + Term 1198457 - 1198503 8.5 + Prom 1198454 - 1198513 3.7 1127 600 Tu 1 . + CDS 1198569 - 1199099 755 ## COG0716 Flavodoxins + Term 1199109 - 1199142 4.5 + Prom 1199260 - 1199319 4.7 1128 601 Tu 1 . + CDS 1199390 - 1199836 434 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 1199854 - 1199887 2.9 - Term 1199891 - 1199927 9.4 1129 602 Op 1 . - CDS 1199939 - 1200313 429 ## ECL_03033 lipoprotein YbfN precursor 1130 602 Op 2 . - CDS 1200313 - 1201728 1621 ## ECL_03034 putative outer membrane porin - Prom 1201771 - 1201830 1.6 - Term 1202112 - 1202155 6.7 1131 603 Tu 1 . - CDS 1202177 - 1203844 2205 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 1203879 - 1203938 3.8 - Term 1203950 - 1203986 8.1 1132 604 Tu 1 . - CDS 1204014 - 1205963 2266 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 1206086 - 1206145 5.8 + Prom 1206130 - 1206189 3.7 1133 605 Op 1 12/0.013 + CDS 1206289 - 1207089 788 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 1207098 - 1207133 1.5 1134 605 Op 2 7/0.083 + CDS 1207145 - 1208293 1272 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 1135 605 Op 3 5/0.231 + CDS 1208302 - 1209522 281 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 1136 605 Op 4 5/0.231 + CDS 1209568 - 1210320 831 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 1210325 - 1210360 5.8 + Prom 1210397 - 1210456 5.4 1137 606 Tu 1 . + CDS 1210571 - 1212235 2145 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 1212250 - 1212281 4.1 + TRNA 1212461 - 1212537 96.2 # Met CAT 0 0 + TRNA 1212546 - 1212630 78.3 # Leu TAG 0 0 + TRNA 1212654 - 1212728 74.3 # Gln TTG 0 0 + TRNA 1212761 - 1212835 74.3 # Gln TTG 0 0 + TRNA 1212853 - 1212929 96.2 # Met CAT 0 0 + TRNA 1212971 - 1213045 75.8 # Gln CTG 0 0 + TRNA 1213080 - 1213154 69.1 # Gln CTG 0 0 - Term 1213159 - 1213223 28.9 1138 607 Tu 1 . - CDS 1213292 - 1214467 1393 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 1214492 - 1214551 2.9 + Prom 1214518 - 1214577 1.6 1139 608 Op 1 10/0.021 + CDS 1214603 - 1216027 506 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase + Term 1216035 - 1216069 5.0 + Prom 1214518 - 1214577 1.6 1140 608 Op 2 10/0.021 + CDS 1214603 - 1216027 308 ## PROTEIN SUPPORTED gi|229245919|ref|ZP_04369978.1| SSU ribosomal protein S12P methylthiotransferase + Term 1216035 - 1216069 5.0 + Prom 1216072 - 1216131 3.0 1141 609 Op 1 17/0.000 + CDS 1216191 - 1217237 1308 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 1142 609 Op 2 11/0.017 + CDS 1217234 - 1217701 663 ## COG0319 Predicted metal-dependent hydrolase 1143 609 Op 3 9/0.034 + CDS 1217786 - 1218664 1180 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 1144 609 Op 4 4/0.364 + CDS 1218670 - 1220208 2103 ## COG0815 Apolipoprotein N-acyltransferase + Term 1220223 - 1220264 2.4 + Prom 1220464 - 1220523 4.5 1145 610 Op 1 31/0.000 + CDS 1220610 - 1221515 1257 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 1221632 - 1221664 4.0 + Prom 1221590 - 1221649 1.6 1146 610 Op 2 17/0.000 + CDS 1221671 - 1222120 455 ## COG0765 ABC-type amino acid transport system, permease component 1147 610 Op 3 17/0.000 + CDS 1222012 - 1222410 512 ## COG0765 ABC-type amino acid transport system, permease component 1148 610 Op 4 34/0.000 + CDS 1222410 - 1223084 915 ## COG0765 ABC-type amino acid transport system, permease component 1149 610 Op 5 4/0.364 + CDS 1223084 - 1223809 534 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 1223815 - 1223862 1.1 + Prom 1223844 - 1223903 3.0 1150 611 Tu 1 . + CDS 1223929 - 1224864 1032 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Prom 1225010 - 1225069 7.4 1151 612 Tu 1 . + CDS 1225153 - 1225854 129 ## Rahaq_4206 hypothetical protein + Term 1225869 - 1225910 2.9 + Prom 1226001 - 1226060 4.1 1152 613 Tu 1 . + CDS 1226088 - 1226567 -52 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 1226674 - 1226702 2.3 - Term 1226746 - 1226788 4.3 1153 614 Tu 1 . - CDS 1226796 - 1227278 487 ## ECL_03053 hypothetical protein - Prom 1227316 - 1227375 2.4 + Prom 1227314 - 1227373 3.8 1154 615 Tu 1 . + CDS 1227493 - 1230075 3438 ## COG0495 Leucyl-tRNA synthetase 1155 616 Op 1 12/0.013 + CDS 1230195 - 1230659 418 ## COG2980 Rare lipoprotein B 1156 616 Op 2 7/0.083 + CDS 1230659 - 1231690 1007 ## COG1466 DNA polymerase III, delta subunit 1157 616 Op 3 14/0.008 + CDS 1231683 - 1232348 513 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase + Prom 1232513 - 1232572 4.2 1158 617 Op 1 14/0.008 + CDS 1232617 - 1232934 305 ## COG0799 Uncharacterized homolog of plant Iojap protein 1159 617 Op 2 9/0.034 + CDS 1232971 - 1233405 373 ## COG1576 Uncharacterized conserved protein 1160 617 Op 3 19/0.000 + CDS 1233434 - 1235335 2201 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 1161 617 Op 4 8/0.053 + CDS 1235338 - 1236450 1288 ## COG0772 Bacterial cell division membrane protein 1162 617 Op 5 12/0.013 + CDS 1236467 - 1237573 1210 ## COG0797 Lipoproteins + Prom 1237616 - 1237675 5.0 1163 618 Tu 1 9/0.034 + CDS 1237713 - 1238924 1542 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 1238975 - 1239017 8.5 + Prom 1238953 - 1239012 5.4 1164 619 Op 1 6/0.121 + CDS 1239032 - 1239295 366 ## COG2921 Uncharacterized conserved protein + Prom 1239297 - 1239356 3.2 1165 619 Op 2 . + CDS 1239390 - 1240031 494 ## COG0321 Lipoate-protein ligase B + Term 1240042 - 1240084 8.2 + Prom 1240225 - 1240284 5.1 1166 620 Tu 1 . + CDS 1240323 - 1241276 681 ## COG0583 Transcriptional regulator + Prom 1241339 - 1241398 3.7 1167 621 Tu 1 . + CDS 1241484 - 1242449 919 ## COG0320 Lipoate synthase + Term 1242483 - 1242511 1.4 - Term 1242462 - 1242506 9.2 1168 622 Op 1 . - CDS 1242529 - 1242732 176 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 1169 622 Op 2 . - CDS 1242858 - 1243646 664 ## COG0388 Predicted amidohydrolase - Prom 1243718 - 1243777 2.7 + Prom 1243626 - 1243685 4.6 1170 623 Op 1 . + CDS 1243782 - 1244096 306 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 1171 623 Op 2 . + CDS 1244168 - 1244254 57 ## + Term 1244271 - 1244299 3.0 - Term 1244259 - 1244287 3.0 1172 624 Tu 1 . - CDS 1244316 - 1244525 344 ## COG1278 Cold shock proteins - Prom 1244633 - 1244692 5.4 - Term 1244538 - 1244568 2.0 1173 625 Tu 1 . - CDS 1244716 - 1245333 629 ## Ent638_1158 palmitoyl transferase - Prom 1245377 - 1245436 1.7 1174 626 Op 1 11/0.017 - CDS 1245453 - 1248569 3256 ## COG3696 Putative silver efflux pump 1175 626 Op 2 . - CDS 1248566 - 1249771 1151 ## COG0845 Membrane-fusion protein 1176 626 Op 3 . - CDS 1249768 - 1251024 1181 ## Ent638_1155 hypothetical protein 1177 626 Op 4 . - CDS 1251037 - 1251330 295 ## Ent638_1154 putative copper efflux system periplasmic protein CusF 1178 626 Op 5 . - CDS 1251384 - 1251782 237 ## Ent638_1153 hypothetical protein - Prom 1251808 - 1251867 4.4 - Term 1251908 - 1251947 -1.0 1179 627 Tu 1 . - CDS 1251950 - 1252063 57 ## + Prom 1252029 - 1252088 3.5 1180 628 Tu 1 . + CDS 1252124 - 1253491 1743 ## COG3069 C4-dicarboxylate transporter + Term 1253508 - 1253549 9.1 1181 629 Tu 1 . + CDS 1253586 - 1254395 566 ## COG3719 Ribonuclease I - Term 1254265 - 1254297 -0.8 1182 630 Tu 1 . - CDS 1254425 - 1255045 570 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 1255093 - 1255152 2.8 + Prom 1255164 - 1255223 4.0 1183 631 Tu 1 . + CDS 1255308 - 1255718 503 ## COG0782 Transcription elongation factor + Term 1255753 - 1255780 0.1 1184 632 Tu 1 . - CDS 1255808 - 1257046 1306 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 1257197 - 1257256 4.7 + Prom 1257129 - 1257188 4.4 1185 633 Tu 1 . + CDS 1257227 - 1257655 448 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 1257663 - 1257692 2.8 - Term 1257649 - 1257682 6.1 1186 634 Op 1 11/0.017 - CDS 1257715 - 1259280 413 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Term 1259355 - 1259385 3.0 1187 634 Op 2 . - CDS 1259467 - 1260030 708 ## COG0450 Peroxiredoxin - Prom 1260148 - 1260207 3.0 + Prom 1260433 - 1260492 5.5 1188 635 Tu 1 . + CDS 1260658 - 1261563 707 ## COG0583 Transcriptional regulator - Term 1261485 - 1261521 2.0 1189 636 Tu 1 . - CDS 1261532 - 1261639 65 ## - Prom 1261700 - 1261759 4.9 + Prom 1261627 - 1261686 5.4 1190 637 Op 1 8/0.053 + CDS 1261732 - 1262955 944 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 1191 637 Op 2 . + CDS 1262940 - 1263554 554 ## COG1475 Predicted transcriptional regulators - Term 1263497 - 1263535 2.4 1192 638 Tu 1 . - CDS 1263567 - 1264727 1296 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 1264757 - 1264816 5.1 + Prom 1264732 - 1264791 2.8 1193 639 Op 1 . + CDS 1264850 - 1265464 489 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1194 639 Op 2 3/0.483 + CDS 1265461 - 1266150 852 ## COG4229 Predicted enolase-phosphatase 1195 639 Op 3 . + CDS 1266147 - 1266689 620 ## COG1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Term 1266696 - 1266732 4.0 1196 640 Tu 1 . - CDS 1266960 - 1267976 1504 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family - Prom 1268002 - 1268061 1.6 + Prom 1267969 - 1268028 2.1 1197 641 Tu 1 . + CDS 1268079 - 1269278 1533 ## COG4857 Predicted kinase 1198 642 Op 1 1/0.716 - CDS 1269331 - 1270572 1330 ## COG5276 Uncharacterized conserved protein - Prom 1270594 - 1270653 1.6 1199 642 Op 2 16/0.000 - CDS 1270666 - 1271730 1577 ## COG1879 ABC-type sugar transport system, periplasmic component 1200 642 Op 3 21/0.000 - CDS 1271750 - 1272670 1365 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components - Term 1272687 - 1272721 1.1 1201 642 Op 4 . - CDS 1272742 - 1274244 1711 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 1274274 - 1274333 2.8 + Prom 1274276 - 1274335 3.4 1202 643 Op 1 1/0.716 + CDS 1274404 - 1275492 1451 ## COG0371 Glycerol dehydrogenase and related enzymes 1203 643 Op 2 2/0.587 + CDS 1275550 - 1276293 226 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 1276386 - 1276445 3.8 1204 644 Op 1 2/0.587 + CDS 1276477 - 1276782 88 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 1205 644 Op 2 . + CDS 1276754 - 1277158 555 ## COG1396 Predicted transcriptional regulators 1206 645 Tu 1 . - CDS 1277155 - 1277352 268 ## COG2879 Uncharacterized small protein 1207 646 Tu 1 . - CDS 1277467 - 1279572 2983 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 1279596 - 1279655 5.2 - Term 1279649 - 1279690 3.0 1208 647 Op 1 5/0.231 - CDS 1279722 - 1280078 384 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 1209 647 Op 2 5/0.231 - CDS 1280135 - 1280890 191 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1210 647 Op 3 5/0.231 - CDS 1280890 - 1281744 1200 ## COG1535 Isochorismate hydrolase 1211 647 Op 4 6/0.121 - CDS 1281755 - 1283365 1906 ## COG1021 Peptide arylation enzymes 1212 647 Op 5 . - CDS 1283375 - 1284550 1289 ## COG1169 Isochorismate synthase 1213 647 Op 6 . - CDS 1284615 - 1284884 60 ## + Prom 1284543 - 1284602 5.3 1214 648 Tu 1 . + CDS 1284739 - 1285698 876 ## COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component + Term 1285717 - 1285756 1.0 1215 649 Tu 1 . - CDS 1285776 - 1287002 1663 ## COG0477 Permeases of the major facilitator superfamily - Prom 1287056 - 1287115 3.4 + Prom 1287002 - 1287061 3.8 1216 650 Op 1 8/0.053 + CDS 1287099 - 1288115 1226 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 1217 650 Op 2 7/0.083 + CDS 1288112 - 1289104 1242 ## COG4779 ABC-type enterobactin transport system, permease component 1218 650 Op 3 . + CDS 1289101 - 1289895 187 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 + Term 1289898 - 1289940 -0.4 - Term 1289704 - 1289742 -1.0 1219 651 Op 1 2/0.587 - CDS 1289978 - 1293835 4473 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 1220 651 Op 2 2/0.587 - CDS 1293832 - 1294044 256 ## COG3251 Uncharacterized protein conserved in bacteria 1221 651 Op 3 . - CDS 1294055 - 1295383 984 ## COG2382 Enterochelin esterase and related enzymes + Prom 1295261 - 1295320 5.5 1222 652 Op 1 4/0.364 + CDS 1295400 - 1297640 3083 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins 1223 652 Op 2 . + CDS 1297698 - 1298372 573 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - Term 1298141 - 1298169 -1.0 1224 653 Op 1 10/0.021 - CDS 1298326 - 1299165 1213 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 1225 653 Op 2 42/0.000 - CDS 1299162 - 1300010 1101 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 1226 653 Op 3 25/0.000 - CDS 1300007 - 1300813 276 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 1227 653 Op 4 . - CDS 1300816 - 1301727 1192 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 1301867 - 1301926 4.4 - Term 1301755 - 1301797 11.2 1228 654 Tu 1 . - CDS 1301963 - 1303996 2521 ## COG1292 Choline-glycine betaine transporter - Prom 1304029 - 1304088 4.2 + Prom 1304012 - 1304071 4.2 1229 655 Op 1 6/0.121 + CDS 1304125 - 1304712 660 ## COG1309 Transcriptional regulator 1230 655 Op 2 10/0.021 + CDS 1304726 - 1306198 1816 ## COG1012 NAD-dependent aldehyde dehydrogenases 1231 655 Op 3 . + CDS 1306212 - 1307876 2053 ## COG2303 Choline dehydrogenase and related flavoproteins + Term 1307993 - 1308034 4.9 1232 656 Tu 1 . - CDS 1308028 - 1308726 443 ## PROTEIN SUPPORTED gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein - Prom 1308750 - 1308809 4.2 1233 657 Tu 1 . - CDS 1308834 - 1309307 597 ## ECL_03124 cold-shock DNA-binding domain protein - Prom 1309348 - 1309407 4.2 - Term 1309379 - 1309410 3.2 1234 658 Op 1 5/0.231 - CDS 1309444 - 1310214 1098 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1235 658 Op 2 3/0.483 - CDS 1310235 - 1311914 1997 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 1236 658 Op 3 . - CDS 1311928 - 1312710 889 ## COG3527 Alpha-acetolactate decarboxylase - Prom 1312742 - 1312801 3.7 + Prom 1312734 - 1312793 2.1 1237 659 Tu 1 . + CDS 1312813 - 1313694 731 ## COG0583 Transcriptional regulator + Term 1313706 - 1313754 1.4 + Prom 1313846 - 1313905 2.5 1238 660 Tu 1 . + CDS 1313981 - 1314436 436 ## ECL_02210 hypothetical protein - Term 1314518 - 1314563 -0.5 1239 661 Tu 1 . - CDS 1314648 - 1315025 175 ## Rahaq_2697 hypothetical protein - Prom 1315046 - 1315105 5.6 + Prom 1315711 - 1315770 2.6 1240 662 Tu 1 . + CDS 1315861 - 1316280 489 ## COG5499 Predicted transcription regulator containing HTH domain 1241 663 Tu 1 . - CDS 1316333 - 1316530 151 ## COG1893 Ketopantoate reductase + Prom 1316777 - 1316836 4.6 1242 664 Op 1 . + CDS 1317048 - 1317539 423 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 1243 664 Op 2 . + CDS 1317550 - 1317906 212 ## plu1461 hypothetical protein 1244 664 Op 3 . + CDS 1317903 - 1318337 292 ## gi|295096681|emb|CBK85771.1| hypothetical protein ENC_21770 + Term 1318346 - 1318379 1.1 - Term 1318330 - 1318367 -1.0 1245 665 Tu 1 . - CDS 1318391 - 1319281 1068 ## COG1893 Ketopantoate reductase - Prom 1319393 - 1319452 2.7 + Prom 1319306 - 1319365 3.2 1246 666 Tu 1 . + CDS 1319387 - 1320508 1249 ## COG2170 Uncharacterized conserved protein - Term 1320402 - 1320458 -0.3 1247 667 Op 1 10/0.021 - CDS 1320459 - 1321631 1366 ## COG0841 Cation/multidrug efflux pump 1248 667 Op 2 27/0.000 - CDS 1321665 - 1323593 2555 ## COG0841 Cation/multidrug efflux pump 1249 667 Op 3 . - CDS 1323603 - 1324667 983 ## COG0845 Membrane-fusion protein - Term 1324723 - 1324757 8.3 1250 668 Tu 1 . - CDS 1324778 - 1327486 3487 ## COG0474 Cation transport ATPase - Prom 1327536 - 1327595 4.2 + Prom 1327522 - 1327581 6.0 1251 669 Tu 1 . + CDS 1327684 - 1327794 86 ## + Term 1327819 - 1327863 -0.0 + Prom 1327835 - 1327894 5.3 1252 670 Tu 1 . + CDS 1327975 - 1328223 291 ## ECL_03152 hypothetical protein - Term 1328223 - 1328263 3.0 1253 671 Op 1 . - CDS 1328278 - 1328619 440 ## COG2207 AraC-type DNA-binding domain-containing proteins 1254 671 Op 2 . - CDS 1328652 - 1329719 1408 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 1329821 - 1329880 5.0 + Prom 1329860 - 1329919 4.1 1255 672 Op 1 1/0.716 + CDS 1329947 - 1330537 731 ## COG1309 Transcriptional regulator 1256 672 Op 2 4/0.364 + CDS 1330527 - 1330895 416 ## COG2315 Uncharacterized protein conserved in bacteria + Term 1330978 - 1331005 1.5 + Prom 1330913 - 1330972 3.6 1257 673 Tu 1 . + CDS 1331016 - 1331669 1007 ## COG0778 Nitroreductase + Term 1331670 - 1331714 6.0 - Term 1331664 - 1331696 5.3 1258 674 Tu 1 . - CDS 1331697 - 1332287 240 ## plu2753 hypothetical protein - Prom 1332313 - 1332372 3.7 1259 675 Tu 1 . - CDS 1332453 - 1333322 712 ## COG1396 Predicted transcriptional regulators - Prom 1333345 - 1333404 3.0 + Prom 1333307 - 1333366 1.8 1260 676 Op 1 3/0.483 + CDS 1333430 - 1334866 1646 ## COG0477 Permeases of the major facilitator superfamily 1261 676 Op 2 . + CDS 1334934 - 1336178 1430 ## COG0668 Small-conductance mechanosensitive channel + Term 1336273 - 1336311 -0.8 - Term 1335950 - 1335982 -1.0 1262 677 Tu 1 6/0.121 - CDS 1336179 - 1337150 1219 ## COG1609 Transcriptional regulators - Term 1337188 - 1337221 4.5 1263 678 Op 1 16/0.000 - CDS 1337226 - 1338368 1367 ## COG0673 Predicted dehydrogenases and related proteins 1264 678 Op 2 4/0.364 - CDS 1338361 - 1339386 1031 ## COG1082 Sugar phosphate isomerases/epimerases 1265 678 Op 3 . - CDS 1339402 - 1340637 1706 ## COG0477 Permeases of the major facilitator superfamily - Prom 1340660 - 1340719 4.3 - Term 1340809 - 1340849 5.9 1266 679 Tu 1 . - CDS 1340853 - 1342238 1729 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 1342264 - 1342323 3.3 1267 680 Tu 1 . - CDS 1342340 - 1344313 2134 ## COG3211 Predicted phosphatase - Prom 1344372 - 1344431 5.8 1268 681 Tu 1 . - CDS 1344441 - 1346609 2774 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 1346692 - 1346751 4.5 - Term 1346641 - 1346668 -0.1 1269 682 Tu 1 . - CDS 1346824 - 1347099 395 ## ECL_03172 hypothetical protein - Prom 1347205 - 1347264 3.6 - Term 1347496 - 1347539 6.7 1270 683 Tu 1 . - CDS 1347547 - 1347936 85 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 1348043 - 1348102 4.6 + Prom 1347925 - 1347984 2.7 1271 684 Op 1 7/0.083 + CDS 1348050 - 1348412 109 ## COG2246 Predicted membrane protein 1272 684 Op 2 . + CDS 1348409 - 1349326 542 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Prom 1350046 - 1350105 4.8 1273 685 Tu 1 . + CDS 1350232 - 1350798 73 ## Pat9b_3529 hypothetical protein + Term 1350979 - 1351016 2.3 - Term 1350793 - 1350827 4.3 1274 686 Tu 1 . - CDS 1350831 - 1352969 290 ## Ctu_11920 hypothetical protein 1275 687 Op 1 . - CDS 1353611 - 1353847 103 ## 1276 687 Op 2 . - CDS 1353856 - 1354626 195 ## 1277 687 Op 3 . - CDS 1354604 - 1356022 479 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 - Term 1356037 - 1356068 1.5 1278 688 Op 1 . - CDS 1356087 - 1356428 221 ## GbCGDNIH1_1566 hypothetical protein - Term 1356438 - 1356465 0.1 1279 688 Op 2 . - CDS 1356496 - 1356732 113 ## 1280 688 Op 3 . - CDS 1356742 - 1357416 186 ## Bpet0994 putative bacteriophage protein 1281 688 Op 4 . - CDS 1357416 - 1358351 444 ## Bpet0993 hypothetical protein 1282 688 Op 5 . - CDS 1358326 - 1358667 210 ## 1283 688 Op 6 . - CDS 1358664 - 1359380 369 ## HIBPF03460 hypothetical protein 1284 688 Op 7 . - CDS 1359382 - 1360953 773 ## COG5281 Phage-related minor tail protein 1285 689 Op 1 . - CDS 1361115 - 1361552 413 ## - Term 1361558 - 1361583 -0.5 1286 689 Op 2 . - CDS 1361589 - 1362035 287 ## HICON_10820 hypothetical protein 1287 689 Op 3 . - CDS 1362038 - 1363378 625 ## Bpet0987 hypothetical protein 1288 689 Op 4 . - CDS 1363398 - 1363937 265 ## 1289 689 Op 5 . - CDS 1363930 - 1364277 117 ## - Prom 1364304 - 1364363 2.3 1290 690 Op 1 . - CDS 1364726 - 1365133 184 ## 1291 690 Op 2 . - CDS 1365133 - 1365336 216 ## - Term 1365342 - 1365368 -1.0 1292 690 Op 3 . - CDS 1365369 - 1366307 798 ## COG4834 Uncharacterized protein conserved in bacteria 1293 690 Op 4 . - CDS 1366317 - 1366826 230 ## 1294 690 Op 5 1/0.716 - CDS 1366826 - 1367926 572 ## COG3566 Uncharacterized protein conserved in bacteria 1295 690 Op 6 . - CDS 1367939 - 1368745 92 ## COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 1296 690 Op 7 . - CDS 1368738 - 1369178 270 ## CGSHiGG_04840 hypothetical protein - Prom 1369216 - 1369275 73.8 1297 691 Op 1 1/0.716 - CDS 1370477 - 1371055 340 ## COG3567 Uncharacterized protein conserved in bacteria 1298 691 Op 2 3/0.483 - CDS 1371065 - 1372405 259 ## COG1783 Phage terminase large subunit 1299 691 Op 3 . - CDS 1372392 - 1372967 180 ## COG3728 Phage terminase, small subunit 1300 691 Op 4 . - CDS 1373024 - 1373407 333 ## SPAB_02241 hypothetical protein - Term 1373433 - 1373463 2.1 1301 691 Op 5 . - CDS 1373607 - 1373909 227 ## Ctu_17370 endopeptidase - Prom 1374074 - 1374133 80.3 - TRNA 1375035 - 1375106 62.0 # Asn GTT 0 0 - Term 1375105 - 1375140 4.0 1302 692 Tu 1 . - CDS 1375263 - 1376072 223 ## ECDH10B_1337 prophage antitermination protein 1303 693 Op 1 . - CDS 1376185 - 1376817 319 ## ECL_01316 bacteriophage lambda NinG family protein 1304 693 Op 2 . - CDS 1376810 - 1376980 82 ## EFER_2709 prophage protein NinE 1305 693 Op 3 . - CDS 1376980 - 1377435 365 ## SSON_2446 hypothetical protein - Prom 1377668 - 1377727 3.7 1306 694 Tu 1 . - CDS 1378623 - 1379189 402 ## AOLE_07425 hypothetical protein 1307 695 Tu 1 . + CDS 1379456 - 1379773 144 ## 1308 696 Op 1 . - CDS 1379617 - 1379961 155 ## gi|288549806|ref|ZP_05968233.2| protein ren 1309 696 Op 2 . - CDS 1379958 - 1380812 437 ## COG1484 DNA replication protein 1310 696 Op 3 . - CDS 1380815 - 1381684 425 ## KPK_4171 phage replication protein O 1311 696 Op 4 . - CDS 1381770 - 1382312 396 ## ECSE_0574 hypothetical protein 1312 696 Op 5 . - CDS 1382343 - 1382558 180 ## YPK_1211 XRE family transcriptional regulator - Prom 1382630 - 1382689 3.9 1313 697 Tu 1 . + CDS 1382668 - 1383303 226 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Prom 1383732 - 1383791 1.8 1314 698 Tu 1 . + CDS 1383861 - 1384478 128 ## Mlg_2307 hypothetical protein - Term 1384949 - 1384975 -0.7 1315 699 Tu 1 . - CDS 1385157 - 1385354 155 ## ECL_03589 hypothetical protein - Prom 1385394 - 1385453 5.2 + Prom 1386086 - 1386145 1.9 1316 700 Op 1 . + CDS 1386254 - 1386817 -21 ## YE2335 hypothetical protein 1317 700 Op 2 . + CDS 1386853 - 1387215 192 ## gi|167465269|ref|ZP_02330358.1| hypothetical protein Plarl_22373 1318 700 Op 3 . + CDS 1387212 - 1387370 132 ## ECL_01298 hypothetical protein 1319 700 Op 4 . + CDS 1387367 - 1387576 232 ## ECDH10B_1323 FtsZ inhibitor protein 1320 700 Op 5 . + CDS 1387647 - 1388618 1076 ## COG3468 Type V secretory pathway, adhesin AidA 1321 700 Op 6 . + CDS 1388627 - 1388824 253 ## KPK_4181 hypothetical protein 1322 700 Op 7 . + CDS 1388821 - 1388979 111 ## KPK_4182 hypothetical protein 1323 700 Op 8 1/0.716 + CDS 1388976 - 1389701 349 ## COG4712 Uncharacterized protein conserved in bacteria 1324 700 Op 9 . + CDS 1389702 - 1390199 253 ## COG0629 Single-stranded DNA-binding protein 1325 700 Op 10 . + CDS 1390225 - 1390446 89 ## gi|261340390|ref|ZP_05968248.1| conserved hypothetical protein + Prom 1390585 - 1390644 2.6 1326 701 Op 1 . + CDS 1390688 - 1391356 349 ## ACICU_02759 phosphoadenosine phosphosulfate reductase 1327 701 Op 2 . + CDS 1391353 - 1392012 696 ## COG4725 Transcriptional activator, adenine-specific DNA methyltransferase 1328 701 Op 3 . + CDS 1392009 - 1392227 89 ## Ent638_1001 hypothetical protein + Term 1392268 - 1392294 -1.0 + Prom 1392428 - 1392487 3.5 1329 702 Op 1 . + CDS 1392723 - 1393040 223 ## SPAB_02271 hypothetical protein 1330 702 Op 2 . + CDS 1393004 - 1393228 98 ## ECSP_2753 hypothetical protein + Term 1393244 - 1393271 -0.1 1331 703 Tu 1 . + CDS 1393617 - 1394009 124 ## SSPA2243 hypothetical protein + Prom 1394163 - 1394222 2.5 1332 704 Tu 1 . + CDS 1394261 - 1395013 386 ## Varpa_1984 type I restriction-modification system methyltransferase subunit-like protein + Term 1395025 - 1395053 0.7 1333 705 Tu 1 . + CDS 1395335 - 1396498 206 ## COG0582 Integrase + Term 1396548 - 1396574 -0.6 - TRNA 1396514 - 1396590 94.8 # Arg TCT 0 0 + Prom 1397064 - 1397123 2.3 1334 706 Op 1 . + CDS 1397146 - 1397556 70 ## ECL_01286 diguanylate phosphodiesterase 1335 706 Op 2 . + CDS 1397581 - 1398297 307 ## ECL_01285 response regulator receiver protein + Term 1398312 - 1398360 1.7 + Prom 1398836 - 1398895 7.6 1336 707 Tu 1 . + CDS 1399107 - 1399739 452 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 1399917 - 1399956 1.1 - Term 1399710 - 1399747 3.3 1337 708 Op 1 4/0.364 - CDS 1399790 - 1400311 435 ## COG3539 P pilus assembly protein, pilin FimA 1338 708 Op 2 6/0.121 - CDS 1400321 - 1401328 1063 ## COG3539 P pilus assembly protein, pilin FimA 1339 708 Op 3 10/0.021 - CDS 1401321 - 1403879 2817 ## COG3188 P pilus assembly protein, porin PapC 1340 708 Op 4 7/0.083 - CDS 1403894 - 1404541 866 ## COG3121 P pilus assembly protein, chaperone PapD 1341 708 Op 5 4/0.364 - CDS 1404621 - 1405163 175 ## COG3539 P pilus assembly protein, pilin FimA - Term 1405179 - 1405209 -1.0 1342 708 Op 6 . - CDS 1405233 - 1405796 685 ## COG3539 P pilus assembly protein, pilin FimA - Prom 1405930 - 1405989 2.6 1343 709 Op 1 2/0.587 + CDS 1406107 - 1406973 1133 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 1344 709 Op 2 . + CDS 1406976 - 1407188 319 ## COG2501 Uncharacterized conserved protein + Term 1407250 - 1407291 4.0 + Prom 1407364 - 1407423 2.1 1345 710 Op 1 7/0.083 + CDS 1407474 - 1408973 2054 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 1408988 - 1409030 9.1 1346 710 Op 2 . + CDS 1409057 - 1410073 806 ## COG1609 Transcriptional regulators + Term 1410084 - 1410128 9.0 1347 711 Tu 1 . + CDS 1410147 - 1410671 456 ## COG1988 Predicted membrane-bound metal-dependent hydrolases + Term 1410678 - 1410720 -0.4 - Term 1410666 - 1410705 5.2 1348 712 Tu 1 . - CDS 1410758 - 1412122 1853 ## COG0215 Cysteinyl-tRNA synthetase - Prom 1412342 - 1412401 3.0 + Prom 1412138 - 1412197 4.5 1349 713 Op 1 8/0.053 + CDS 1412319 - 1412813 617 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 1350 713 Op 2 5/0.231 + CDS 1412817 - 1413539 773 ## COG2908 Uncharacterized protein conserved in bacteria + Prom 1413557 - 1413616 2.6 1351 714 Op 1 29/0.000 + CDS 1413659 - 1414168 541 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 1352 714 Op 2 . + CDS 1414165 - 1415232 1438 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 1353 714 Op 3 . + CDS 1415317 - 1416387 1223 ## COG2603 Predicted ATPase - Term 1416381 - 1416420 5.2 1354 715 Tu 1 . - CDS 1416475 - 1417620 1669 ## COG3203 Outer membrane protein (porin) - Term 1417748 - 1417783 6.5 1355 716 Op 1 11/0.017 - CDS 1417803 - 1420217 3073 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 1356 716 Op 2 . - CDS 1420214 - 1420900 312 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 1421021 - 1421080 1.9 1357 717 Op 1 5/0.231 + CDS 1420634 - 1421503 575 ## COG2755 Lysophospholipase L1 and related esterases 1358 717 Op 2 3/0.483 + CDS 1421523 - 1422293 230 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 1359 717 Op 3 . + CDS 1422352 - 1423206 1277 ## COG3118 Thioredoxin domain-containing protein - Term 1423203 - 1423242 -1.0 1360 718 Op 1 4/0.364 - CDS 1423258 - 1423998 811 ## COG0390 ABC-type uncharacterized transport system, permease component 1361 718 Op 2 . - CDS 1424033 - 1424704 254 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 1424750 - 1424809 3.9 + Prom 1424648 - 1424707 7.6 1362 719 Tu 1 . + CDS 1424847 - 1425701 823 ## Ent638_1868 hypothetical protein + Term 1425709 - 1425743 2.5 + Prom 1425747 - 1425806 3.3 1363 720 Op 1 26/0.000 + CDS 1425856 - 1426770 1380 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 1364 720 Op 2 . + CDS 1426767 - 1427225 601 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 1365 721 Tu 1 . - CDS 1427222 - 1427626 400 ## COG0789 Predicted transcriptional regulators - Prom 1427709 - 1427768 4.7 + Prom 1427614 - 1427673 4.1 1366 722 Op 1 1/0.716 + CDS 1427735 - 1430233 2763 ## COG2217 Cation transport ATPase 1367 722 Op 2 5/0.231 + CDS 1430257 - 1431078 766 ## COG3735 Uncharacterized protein conserved in bacteria + Term 1431093 - 1431128 1.1 + Prom 1431083 - 1431142 2.6 1368 723 Tu 1 . + CDS 1431277 - 1431756 614 ## COG2606 Uncharacterized conserved protein + Term 1431944 - 1431984 -0.3 - Term 1431753 - 1431792 5.2 1369 724 Tu 1 . - CDS 1431852 - 1433504 2018 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 1433637 - 1433696 3.0 + Prom 1433563 - 1433622 4.8 1370 725 Tu 1 . + CDS 1433669 - 1434889 1427 ## COG0477 Permeases of the major facilitator superfamily + Prom 1434961 - 1435020 3.9 1371 726 Tu 1 . + CDS 1435122 - 1436798 522 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 1436829 - 1436863 8.3 1372 727 Op 1 . - CDS 1436973 - 1438277 1756 ## COG0524 Sugar kinases, ribokinase family - Term 1438286 - 1438333 0.8 1373 727 Op 2 6/0.121 - CDS 1438340 - 1439302 1146 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 1439327 - 1439386 3.9 - Term 1439381 - 1439417 7.6 1374 728 Tu 1 . - CDS 1439427 - 1440071 1047 ## COG0563 Adenylate kinase and related kinases - Prom 1440238 - 1440297 2.5 - Term 1440101 - 1440145 2.6 1375 729 Tu 1 . - CDS 1440301 - 1442175 2924 ## COG0326 Molecular chaperone, HSP90 family 1376 730 Op 1 23/0.000 - CDS 1442286 - 1442891 718 ## COG0353 Recombinational DNA repair protein (RecF pathway) 1377 730 Op 2 30/0.000 - CDS 1442891 - 1443223 230 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Term 1443246 - 1443275 0.2 1378 730 Op 3 8/0.053 - CDS 1443277 - 1445205 2078 ## COG2812 DNA polymerase III, gamma/tau subunits 1379 730 Op 4 5/0.231 - CDS 1445294 - 1445845 747 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 1380 731 Tu 1 . - CDS 1445997 - 1446374 323 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 1446397 - 1446456 2.5 + Prom 1446324 - 1446383 2.2 1381 732 Op 1 . + CDS 1446497 - 1446952 506 ## COG3923 Primosomal replication protein N'' 1382 732 Op 2 . + CDS 1446967 - 1447140 239 ## ECL_01237 hypothetical protein + Term 1447222 - 1447256 -0.1 - Term 1447088 - 1447137 4.1 1383 733 Tu 1 . - CDS 1447145 - 1450492 4020 ## COG3264 Small-conductance mechanosensitive channel - Prom 1450532 - 1450591 2.2 - Term 1450516 - 1450553 6.1 1384 734 Tu 1 . - CDS 1450606 - 1451259 642 ## COG1309 Transcriptional regulator - Prom 1451448 - 1451507 4.5 + Prom 1451263 - 1451322 2.8 1385 735 Op 1 27/0.000 + CDS 1451401 - 1452594 1259 ## COG0845 Membrane-fusion protein 1386 735 Op 2 . + CDS 1452617 - 1455763 3749 ## COG0841 Cation/multidrug efflux pump + Term 1455777 - 1455820 7.2 + Prom 1456120 - 1456179 6.0 1387 736 Op 1 . + CDS 1456272 - 1456646 258 ## ECL_01232 hypothetical protein 1388 736 Op 2 . + CDS 1456674 - 1456892 181 ## APECO1_1553 Hha protein + Term 1457010 - 1457042 0.4 + Prom 1457021 - 1457080 3.0 1389 737 Tu 1 . + CDS 1457101 - 1457652 525 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 1457664 - 1457710 5.0 + Prom 1457675 - 1457734 5.0 1390 738 Tu 1 . + CDS 1457769 - 1458236 476 ## ECL_01229 hypothetical protein + Term 1458256 - 1458292 5.1 1391 739 Op 1 . - CDS 1458272 - 1458412 239 ## PROTEIN SUPPORTED gi|146310596|ref|YP_001175670.1| 50S ribosomal protein L36 1392 739 Op 2 . - CDS 1458415 - 1458675 397 ## PROTEIN SUPPORTED gi|162286713|ref|YP_001175669.2| 50S ribosomal protein L31 type B - Prom 1458703 - 1458762 6.3 + Prom 1458649 - 1458708 4.1 1393 740 Tu 1 . + CDS 1458893 - 1460461 1482 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains 1394 741 Tu 1 . - CDS 1460454 - 1460726 399 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 1460748 - 1460807 2.7 + Prom 1460735 - 1460794 2.5 1395 742 Tu 1 . + CDS 1460861 - 1461280 282 ## COG2215 ABC-type uncharacterized transport system, permease component 1396 743 Tu 1 . - CDS 1461703 - 1462119 474 ## COG3250 Beta-galactosidase/beta-glucuronidase 1397 744 Tu 1 . - CDS 1462432 - 1464792 1923 ## COG3250 Beta-galactosidase/beta-glucuronidase 1398 745 Op 1 . - CDS 1464896 - 1465966 1061 ## COG1609 Transcriptional regulators 1399 745 Op 2 . - CDS 1466044 - 1466655 733 ## COG2364 Predicted membrane protein + Prom 1466656 - 1466715 4.0 1400 746 Tu 1 . + CDS 1466740 - 1468161 1470 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 1468186 - 1468227 10.1 - Term 1468167 - 1468220 13.2 1401 747 Op 1 . - CDS 1468232 - 1468447 173 ## ECL_01217 hypothetical protein 1402 747 Op 2 . - CDS 1468444 - 1468695 180 ## Ent638_0924 hypothetical protein - Prom 1468769 - 1468828 5.4 - 5S_RRNA 1468933 - 1469046 95.0 # ECU82664 [D:55896..56009] # 4.5S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + Prom 1469082 - 1469141 1.8 1403 748 Tu 1 . + CDS 1469209 - 1469520 193 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 1469632 - 1469676 7.2 1404 749 Tu 1 . - CDS 1469557 - 1470084 546 ## COG3126 Uncharacterized protein conserved in bacteria - Prom 1470326 - 1470385 2.8 + Prom 1470157 - 1470216 3.5 1405 750 Tu 1 . + CDS 1470288 - 1471148 925 ## COG1946 Acyl-CoA thioesterase - Term 1471203 - 1471234 2.5 1406 751 Op 1 24/0.000 - CDS 1471247 - 1472533 1711 ## COG0004 Ammonia permease 1407 751 Op 2 4/0.364 - CDS 1472569 - 1472907 463 ## COG0347 Nitrogen regulatory protein PII - Prom 1472987 - 1473046 3.4 - Term 1473024 - 1473067 4.6 1408 752 Op 1 35/0.000 - CDS 1473119 - 1474900 233 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1409 752 Op 2 3/0.483 - CDS 1474893 - 1476647 180 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 1410 752 Op 3 . - CDS 1476678 - 1477136 468 ## COG1522 Transcriptional regulators - Prom 1477163 - 1477222 3.4 + Prom 1477119 - 1477178 3.1 1411 753 Tu 1 . + CDS 1477252 - 1478298 962 ## COG0031 Cysteine synthase + Term 1478334 - 1478371 1.1 - Term 1478289 - 1478325 4.5 1412 754 Op 1 . - CDS 1478339 - 1479157 840 ## COG0561 Predicted hydrolases of the HAD superfamily 1413 754 Op 2 . - CDS 1479160 - 1479375 116 ## - Prom 1479489 - 1479548 1.6 + Prom 1479163 - 1479222 2.6 1414 755 Op 1 5/0.231 + CDS 1479259 - 1480959 948 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 1480984 - 1481012 -0.9 1415 755 Op 2 . + CDS 1481026 - 1481721 713 ## COG0603 Predicted PP-loop superfamily ATPase + Term 1481733 - 1481778 5.0 - Term 1481711 - 1481754 -0.9 1416 756 Op 1 5/0.231 - CDS 1481784 - 1482182 513 ## COG0824 Predicted thioesterase - Prom 1482210 - 1482269 2.1 1417 756 Op 2 6/0.121 - CDS 1482280 - 1482660 535 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 1482687 - 1482746 1.6 - Term 1482735 - 1482762 1.5 1418 757 Tu 1 . - CDS 1482809 - 1484680 2256 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 1484751 - 1484810 2.2 - Term 1484825 - 1484856 2.5 1419 758 Op 1 16/0.000 - CDS 1484893 - 1485165 212 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 1485287 - 1485346 3.5 - Term 1485302 - 1485343 6.3 1420 758 Op 2 18/0.000 - CDS 1485376 - 1487730 3011 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 1487803 - 1487862 3.6 - Term 1487852 - 1487882 2.7 1421 758 Op 3 24/0.000 - CDS 1487915 - 1489189 1697 ## COG1219 ATP-dependent protease Clp, ATPase subunit - Prom 1489236 - 1489295 1.6 1422 758 Op 4 29/0.000 - CDS 1489317 - 1489940 722 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 1490128 - 1490187 5.0 - Term 1490119 - 1490178 6.2 1423 758 Op 5 2/0.587 - CDS 1490201 - 1491499 1610 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 1491700 - 1491759 5.0 - Term 1491738 - 1491775 7.1 1424 759 Tu 1 . - CDS 1491831 - 1492148 253 ## COG0271 Stress-induced morphogen (activity unknown) 1425 760 Op 1 1/0.716 + CDS 1492491 - 1493030 748 ## COG3056 Uncharacterized lipoprotein 1426 760 Op 2 5/0.231 + CDS 1493076 - 1494551 1476 ## COG0477 Permeases of the major facilitator superfamily + Term 1494753 - 1494797 -0.9 + Prom 1494735 - 1494794 6.7 1427 761 Op 1 25/0.000 + CDS 1495031 - 1495978 983 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 1428 761 Op 2 20/0.000 + CDS 1495995 - 1497986 2352 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 1429 761 Op 3 16/0.000 + CDS 1497976 - 1498590 776 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 1430 761 Op 4 7/0.083 + CDS 1498590 - 1498916 342 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 1431 761 Op 5 . + CDS 1498928 - 1499815 1142 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 1499828 - 1499868 9.7 1432 762 Op 1 5/0.231 - CDS 1499841 - 1500284 332 ## COG4154 Fucose dissimilation pathway protein FucU 1433 762 Op 2 4/0.364 - CDS 1500277 - 1501680 962 ## COG1070 Sugar (pentulose and hexulose) kinases 1434 762 Op 3 . - CDS 1501730 - 1503508 1657 ## COG2407 L-fucose isomerase and related proteins - Prom 1503717 - 1503776 4.8 + Prom 1503759 - 1503818 5.3 1435 763 Op 1 21/0.000 + CDS 1503917 - 1505416 177 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 1436 763 Op 2 16/0.000 + CDS 1505485 - 1506402 1248 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1437 763 Op 3 . + CDS 1506449 - 1507399 1239 ## COG1879 ABC-type sugar transport system, periplasmic component 1438 763 Op 4 . + CDS 1507411 - 1509000 1507 ## COG1069 Ribulose kinase 1439 763 Op 5 1/0.716 + CDS 1509062 - 1510057 991 ## COG1609 Transcriptional regulators 1440 763 Op 6 3/0.483 + CDS 1510085 - 1510732 694 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 1510739 - 1510781 1.4 + Prom 1510767 - 1510826 3.0 1441 764 Tu 1 . + CDS 1510847 - 1512205 1475 ## COG0477 Permeases of the major facilitator superfamily 1442 765 Tu 1 . + CDS 1512611 - 1513300 573 ## ECL_04607 hypothetical protein + Term 1513335 - 1513368 2.1 - Term 1513323 - 1513356 4.1 1443 766 Tu 1 . - CDS 1513377 - 1513868 567 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 1513894 - 1513953 4.9 + Prom 1513896 - 1513955 5.3 1444 767 Op 1 4/0.364 + CDS 1513990 - 1514901 1098 ## COG1893 Ketopantoate reductase 1445 767 Op 2 . + CDS 1514864 - 1515457 650 ## COG0693 Putative intracellular protease/amidase - Term 1515458 - 1515497 5.2 1446 768 Tu 1 . - CDS 1515579 - 1517027 1941 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 1517067 - 1517126 5.9 + Prom 1517122 - 1517181 4.5 1447 769 Op 1 22/0.000 + CDS 1517206 - 1517448 358 ## COG1722 Exonuclease VII small subunit 1448 769 Op 2 13/0.011 + CDS 1517449 - 1518348 981 ## COG0142 Geranylgeranyl pyrophosphate synthase 1449 769 Op 3 3/0.483 + CDS 1518373 - 1520235 2295 ## COG1154 Deoxyxylulose-5-phosphate synthase 1450 769 Op 4 . + CDS 1520298 - 1521272 1180 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1451 770 Tu 1 11/0.017 - CDS 1521372 - 1522343 1151 ## COG0611 Thiamine monophosphate kinase - Term 1522358 - 1522417 15.6 1452 771 Op 1 17/0.000 - CDS 1522421 - 1522840 406 ## COG0781 Transcription termination factor 1453 771 Op 2 6/0.121 - CDS 1522862 - 1523332 553 ## COG0054 Riboflavin synthase beta-chain 1454 771 Op 3 14/0.008 - CDS 1523420 - 1524523 1210 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 1455 771 Op 4 . - CDS 1524528 - 1524977 500 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 1525004 - 1525063 5.8 + Prom 1525043 - 1525102 3.2 1456 772 Tu 1 . + CDS 1525130 - 1525669 539 ## ECL_01170 hypothetical protein + Term 1525679 - 1525718 9.3 + Prom 1525702 - 1525761 5.3 1457 773 Tu 1 . + CDS 1525938 - 1526822 1258 ## COG3248 Nucleoside-binding outer membrane protein + Term 1526916 - 1526955 -0.3 1458 774 Op 1 1/0.716 - CDS 1526948 - 1527628 648 ## COG2378 Predicted transcriptional regulator 1459 774 Op 2 1/0.716 - CDS 1527639 - 1528004 400 ## COG3324 Predicted enzyme related to lactoylglutathione lyase - Prom 1528053 - 1528112 2.8 - Term 1528083 - 1528131 4.5 1460 775 Op 1 31/0.000 - CDS 1528143 - 1529057 1340 ## COG0341 Preprotein translocase subunit SecF 1461 775 Op 2 25/0.000 - CDS 1529125 - 1530939 2393 ## COG0342 Preprotein translocase subunit SecD 1462 775 Op 3 15/0.006 - CDS 1531000 - 1531332 531 ## COG1862 Preprotein translocase subunit YajC 1463 775 Op 4 17/0.000 - CDS 1531355 - 1532482 1074 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 1464 775 Op 5 . - CDS 1532536 - 1533606 1328 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 1533633 - 1533692 4.6 + Prom 1533564 - 1533623 2.5 1465 776 Tu 1 . + CDS 1533699 - 1534280 569 ## COG3124 Uncharacterized protein conserved in bacteria + Term 1534308 - 1534340 1.2 + Prom 1534308 - 1534367 5.5 1466 777 Tu 1 . + CDS 1534408 - 1535010 712 ## COG0450 Peroxiredoxin + Term 1535021 - 1535075 3.7 - Term 1535020 - 1535047 1.5 1467 778 Op 1 . - CDS 1535067 - 1536446 1191 ## CKO_02759 hypothetical protein 1468 778 Op 2 . - CDS 1536443 - 1539052 2751 ## COG5373 Predicted membrane protein - Term 1539062 - 1539120 0.3 1469 778 Op 3 5/0.231 - CDS 1539144 - 1540961 1863 ## COG0366 Glycosidases - Prom 1541037 - 1541096 4.5 1470 779 Op 1 5/0.231 - CDS 1541125 - 1542498 1968 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 1542523 - 1542557 7.4 1471 779 Op 2 4/0.364 - CDS 1542580 - 1543899 1726 ## COG1114 Branched-chain amino acid permeases - Prom 1544072 - 1544131 5.5 - Term 1544247 - 1544281 7.0 1472 780 Op 1 40/0.000 - CDS 1544309 - 1545604 1191 ## COG0642 Signal transduction histidine kinase 1473 780 Op 2 . - CDS 1545626 - 1546315 848 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 1546359 - 1546418 6.3 + Prom 1546419 - 1546478 4.9 1474 781 Op 1 28/0.000 + CDS 1546503 - 1547708 1158 ## COG0420 DNA repair exonuclease 1475 781 Op 2 . + CDS 1547705 - 1550836 3181 ## COG0419 ATPase involved in DNA repair + Term 1550890 - 1550926 -0.9 1476 782 Tu 1 . - CDS 1550979 - 1551971 281 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 1551993 - 1552052 2.3 + Prom 1551919 - 1551978 4.2 1477 783 Tu 1 . + CDS 1552008 - 1552922 1198 ## COG2974 DNA recombination-dependent growth factor C + Term 1553096 - 1553136 0.7 - Term 1552922 - 1552963 2.4 1478 784 Op 1 . - CDS 1552970 - 1553257 377 ## COG3123 Uncharacterized protein conserved in bacteria 1479 784 Op 2 . - CDS 1553329 - 1554006 803 ## ECL_01148 hypothetical protein - Prom 1554160 - 1554219 5.0 - Term 1554078 - 1554124 0.3 1480 785 Op 1 . - CDS 1554243 - 1554434 106 ## ECL_01147 hypothetical protein 1481 785 Op 2 1/0.716 - CDS 1554479 - 1555003 503 ## COG0703 Shikimate kinase - Prom 1555067 - 1555126 2.3 - Term 1555075 - 1555128 -0.8 1482 786 Tu 1 . - CDS 1555148 - 1555606 523 ## COG1671 Uncharacterized protein conserved in bacteria - Prom 1555678 - 1555737 3.8 + Prom 1555611 - 1555670 4.2 1483 787 Tu 1 . + CDS 1555704 - 1556513 1177 ## COG0345 Pyrroline-5-carboxylate reductase + Term 1556521 - 1556575 -0.0 - Term 1556374 - 1556412 -0.6 1484 788 Tu 1 . - CDS 1556530 - 1557630 895 ## COG2199 FOG: GGDEF domain - Prom 1557657 - 1557716 4.8 - Term 1557689 - 1557728 8.2 1485 789 Tu 1 . - CDS 1557736 - 1558056 413 ## ECL_01142 hypothetical protein - Prom 1558244 - 1558303 8.6 1486 790 Tu 1 . - CDS 1558350 - 1558610 359 ## ROD_04261 hypothetical protein - Prom 1558633 - 1558692 4.5 - Term 1558747 - 1558788 6.3 1487 791 Op 1 . - CDS 1558819 - 1560033 1161 ## COG0477 Permeases of the major facilitator superfamily - Prom 1560141 - 1560200 2.6 1488 791 Op 2 . - CDS 1560203 - 1560910 341 ## COG3921 Uncharacterized protein conserved in bacteria - Prom 1561111 - 1561170 1.8 + Prom 1560851 - 1560910 3.0 1489 792 Tu 1 . + CDS 1560991 - 1562088 1513 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes - Term 1561909 - 1561944 -0.7 1490 793 Tu 1 . - CDS 1562092 - 1562313 350 ## ECL_01136 hypothetical protein - Prom 1562401 - 1562460 3.2 + Prom 1562360 - 1562419 2.8 1491 794 Tu 1 . + CDS 1562562 - 1562864 293 ## ECL_01135 putative inner membrane protein + Term 1562935 - 1562987 2.8 1492 795 Op 1 . - CDS 1562865 - 1563962 1109 ## ECL_01134 hypothetical protein 1493 795 Op 2 . - CDS 1563976 - 1565196 1464 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components - Prom 1565300 - 1565359 2.7 + Prom 1565330 - 1565389 3.1 1494 796 Tu 1 . + CDS 1565547 - 1566707 932 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 1566720 - 1566770 3.9 1495 797 Op 1 . - CDS 1566710 - 1567339 249 ## ECL_01130 putative DNA-binding transcriptional regulator - Prom 1567368 - 1567427 1.9 - Term 1567383 - 1567424 1.6 1496 797 Op 2 . - CDS 1567429 - 1570203 3103 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 1570363 - 1570422 8.2 + Prom 1570374 - 1570433 8.0 1497 798 Op 1 . + CDS 1570655 - 1571629 1301 ## COG0113 Delta-aminolevulinic acid dehydratase 1498 798 Op 2 . + CDS 1571703 - 1573433 1454 ## COG3176 Putative hemolysin 1499 799 Op 1 5/0.231 - CDS 1573559 - 1574410 1062 ## COG2175 Probable taurine catabolism dioxygenase 1500 799 Op 2 7/0.083 - CDS 1574407 - 1575234 921 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 1501 799 Op 3 6/0.121 - CDS 1575231 - 1575998 264 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1502 799 Op 4 . - CDS 1576009 - 1576971 1294 ## COG4521 ABC-type taurine transport system, periplasmic component 1503 799 Op 5 1/0.716 - CDS 1576992 - 1578047 992 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 1504 799 Op 6 . - CDS 1578034 - 1579434 1379 ## COG0833 Amino acid transporters - Prom 1579472 - 1579531 2.1 + Prom 1579508 - 1579567 2.7 1505 800 Tu 1 . + CDS 1579592 - 1580701 1470 ## COG0628 Predicted permease + Term 1580719 - 1580747 1.3 + Prom 1580718 - 1580777 4.2 1506 801 Tu 1 . + CDS 1580888 - 1582600 1408 ## COG2770 FOG: HAMP domain 1507 802 Op 1 . - CDS 1582623 - 1583132 382 ## ECL_01095 hypothetical protein 1508 802 Op 2 . - CDS 1583148 - 1584047 670 ## COG0583 Transcriptional regulator - Prom 1584078 - 1584137 2.9 + Prom 1584026 - 1584085 2.8 1509 803 Op 1 3/0.483 + CDS 1584146 - 1584940 546 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1510 803 Op 2 . + CDS 1584965 - 1586167 729 ## COG3386 Gluconolactonase + Term 1586239 - 1586269 5.0 1511 804 Op 1 . + CDS 1586598 - 1586861 203 ## COG3915 Uncharacterized protein conserved in bacteria 1512 804 Op 2 . + CDS 1586879 - 1588816 1122 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 1589017 - 1589053 2.0 + Prom 1588845 - 1588904 4.6 1513 805 Op 1 1/0.716 + CDS 1589076 - 1589333 310 ## COG3811 Uncharacterized protein conserved in bacteria 1514 805 Op 2 . + CDS 1589344 - 1590090 682 ## COG0500 SAM-dependent methyltransferases + Term 1590093 - 1590146 10.1 1515 806 Tu 1 . - CDS 1590532 - 1591209 211 ## Sputw3181_2399 RNA-directed DNA polymerase (reverse transcriptase) - Prom 1591242 - 1591301 3.2 - Term 1592892 - 1592937 -0.5 1516 807 Op 1 . - CDS 1593102 - 1593593 238 ## Dda3937_02201 hypothetical protein 1517 807 Op 2 . - CDS 1593628 - 1594332 475 ## 1518 807 Op 3 . - CDS 1594410 - 1594607 131 ## 1519 807 Op 4 . - CDS 1594650 - 1594916 152 ## 1520 807 Op 5 . - CDS 1594995 - 1596758 1459 ## COG3378 Predicted ATPase 1521 808 Tu 1 . - CDS 1597080 - 1597283 221 ## CKO_01888 hypothetical protein 1522 809 Op 1 . - CDS 1597399 - 1598274 963 ## KPK_A0175 hypothetical protein 1523 809 Op 2 . - CDS 1598267 - 1598455 66 ## - Prom 1598557 - 1598616 3.2 1524 810 Op 1 . - CDS 1599114 - 1599722 327 ## COG3617 Prophage antirepressor 1525 810 Op 2 . - CDS 1599744 - 1599956 67 ## COG3311 Predicted transcriptional regulator - Prom 1599986 - 1600045 3.5 - Term 1600099 - 1600150 6.2 1526 811 Tu 1 . - CDS 1600166 - 1600849 276 ## YpsIP31758_0894 hypothetical protein - Prom 1601099 - 1601158 4.1 1527 812 Tu 1 . - CDS 1601372 - 1602586 408 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - TRNA 1602753 - 1602835 23.5 # Thr CGT 0 0 + Prom 1603599 - 1603658 2.1 1528 813 Tu 1 . + CDS 1603881 - 1604291 150 ## COG0582 Integrase + Prom 1605064 - 1605123 3.1 1529 814 Tu 1 . + CDS 1605217 - 1605981 139 ## JW0273 hypothetical protein + Prom 1606340 - 1606399 7.7 1530 815 Tu 1 . + CDS 1606444 - 1607064 246 ## JW0271 conserved hypothetical protein - Term 1607071 - 1607109 3.7 1531 816 Op 1 . - CDS 1607138 - 1607632 114 ## gi|125659368|dbj|BAF46885.1| hypothetical protein 1532 816 Op 2 . - CDS 1607667 - 1610798 3477 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 1533 816 Op 3 . - CDS 1610798 - 1611973 1468 ## ESA_00616 hypothetical protein 1534 816 Op 4 27/0.000 - CDS 1611966 - 1612766 146 ## COG0732 Restriction endonuclease S subunits - Term 1613063 - 1613115 4.6 1535 816 Op 5 . - CDS 1613263 - 1614972 2178 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 1615043 - 1615102 4.9 + Prom 1616588 - 1616647 80.4 1536 817 Op 1 . + CDS 1616725 - 1617000 223 ## COG0583 Transcriptional regulator + Prom 1617249 - 1617308 5.4 1537 817 Op 2 . + CDS 1617329 - 1618192 523 ## COG3596 Predicted GTPase + Term 1618220 - 1618259 0.5 + Prom 1618203 - 1618262 2.2 1538 818 Tu 1 . + CDS 1618284 - 1618625 340 ## JW0242 conserved hypothetical protein + Prom 1621927 - 1621986 80.3 1539 819 Op 1 . + CDS 1622097 - 1622318 130 ## JW5956 hypothetical protein 1540 819 Op 2 . + CDS 1622337 - 1622654 369 ## JW0235 antitoxin of the YkfI-YafW toxin-antitoxin system 1541 819 Op 3 . + CDS 1622675 - 1623004 235 ## JW0234 toxin of the YkfI-YafW toxin-antitoxin system + Term 1623248 - 1623293 9.7 1542 820 Tu 1 . - CDS 1623355 - 1624212 797 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 1624248 - 1624307 3.5 1543 821 Op 1 16/0.000 - CDS 1624343 - 1625293 1437 ## COG1879 ABC-type sugar transport system, periplasmic component - Term 1625325 - 1625371 -0.4 1544 821 Op 2 21/0.000 - CDS 1625382 - 1626443 1464 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1545 821 Op 3 4/0.364 - CDS 1626467 - 1628005 179 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1546 821 Op 4 . - CDS 1628002 - 1628655 740 ## COG5618 Predicted periplasmic lipoprotein 1547 822 Op 1 2/0.587 + CDS 1629088 - 1630653 1488 ## COG1070 Sugar (pentulose and hexulose) kinases 1548 822 Op 2 . + CDS 1630674 - 1632197 1982 ## COG0578 Glycerol-3-phosphate dehydrogenase 1549 822 Op 3 . + CDS 1632208 - 1633140 1024 ## EFER_0336 D-erythrulose-phosphate dehydrogenase 1550 822 Op 4 . + CDS 1633176 - 1633619 456 ## COG0054 Riboflavin synthase beta-chain 1551 822 Op 5 . + CDS 1633623 - 1634579 1061 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 1552 823 Op 1 . - CDS 1634562 - 1635524 1030 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 1553 823 Op 2 . - CDS 1635583 - 1636353 763 ## COG0149 Triosephosphate isomerase - Prom 1636523 - 1636582 3.9 + Prom 1636482 - 1636541 3.8 1554 824 Op 1 . + CDS 1636609 - 1637076 611 ## COG0698 Ribose 5-phosphate isomerase RpiB 1555 824 Op 2 . + CDS 1637092 - 1638066 1070 ## COG0176 Transaldolase + Term 1638101 - 1638163 14.7 1556 825 Tu 1 . - CDS 1638200 - 1638622 364 ## COG1114 Branched-chain amino acid permeases + Prom 1639036 - 1639095 2.2 1557 826 Tu 1 . + CDS 1639134 - 1639835 358 ## COG2378 Predicted transcriptional regulator - TRNA 1639961 - 1640036 91.5 # Thr CGT 0 0 1558 827 Op 1 22/0.000 - CDS 1640148 - 1641401 1677 ## COG0014 Gamma-glutamyl phosphate reductase 1559 827 Op 2 . - CDS 1641413 - 1642516 1035 ## COG0263 Glutamate 5-kinase - Prom 1642555 - 1642614 3.3 + Prom 1642649 - 1642708 5.1 1560 828 Tu 1 . + CDS 1642822 - 1643874 1226 ## COG3203 Outer membrane protein (porin) + Term 1643908 - 1643966 4.7 - Term 1643882 - 1643906 -0.3 1561 829 Op 1 . - CDS 1644005 - 1644406 445 ## Ent638_0766 DNA-binding transcriptional regulator Crl 1562 829 Op 2 6/0.121 - CDS 1644463 - 1645707 1055 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 1645735 - 1645794 3.5 - Term 1645757 - 1645793 6.1 1563 830 Tu 1 . - CDS 1645812 - 1646270 645 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 1646330 - 1646389 3.3 + Prom 1646382 - 1646441 2.4 1564 831 Tu 1 . + CDS 1646532 - 1647989 1879 ## COG2195 Di- and tripeptidases 1565 832 Tu 1 . - CDS 1648045 - 1649103 1040 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 1649123 - 1649182 5.7 1566 833 Op 1 . - CDS 1649211 - 1649411 185 ## COG2991 Uncharacterized protein conserved in bacteria 1567 833 Op 2 7/0.083 - CDS 1649414 - 1650637 1285 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 1568 833 Op 3 9/0.034 - CDS 1650648 - 1651244 945 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 1569 833 Op 4 9/0.034 - CDS 1651251 - 1651889 755 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 1570 833 Op 5 9/0.034 - CDS 1651882 - 1652676 1042 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 1571 833 Op 6 7/0.083 - CDS 1652669 - 1653904 1551 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 1572 833 Op 7 . - CDS 1653907 - 1655250 1125 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA - Prom 1655389 - 1655448 2.6 + Prom 1655394 - 1655453 3.9 1573 834 Tu 1 . + CDS 1655551 - 1656291 780 ## COG3034 Uncharacterized protein conserved in bacteria + Term 1656301 - 1656336 4.8 - Term 1656214 - 1656259 -0.8 1574 835 Tu 1 . - CDS 1656262 - 1657029 791 ## COG0121 Predicted glutamine amidotransferase - Prom 1657105 - 1657164 2.1 - Term 1657035 - 1657066 -0.7 1575 836 Tu 1 . - CDS 1657180 - 1657758 831 ## COG0279 Phosphoheptose isomerase - Prom 1657878 - 1657937 4.4 + Prom 1657895 - 1657954 4.0 1576 837 Tu 1 . + CDS 1657998 - 1660442 3217 ## COG1960 Acyl-CoA dehydrogenases + Term 1660462 - 1660490 1.3 + Prom 1660466 - 1660525 6.2 1577 838 Tu 1 . + CDS 1660595 - 1661320 512 ## COG0388 Predicted amidohydrolase - TRNA 1661421 - 1661497 90.7 # Asp GTC 0 0 - Term 1661376 - 1661413 7.1 1578 839 Tu 1 . - CDS 1661630 - 1662370 738 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 1662407 - 1662466 3.5 + Prom 1662330 - 1662389 2.8 1579 840 Tu 1 . + CDS 1662426 - 1662893 409 ## COG0328 Ribonuclease HI - Term 1662676 - 1662703 -0.8 1580 841 Tu 1 . - CDS 1662894 - 1663610 556 ## COG0500 SAM-dependent methyltransferases - Prom 1663640 - 1663699 3.7 + Prom 1663442 - 1663501 2.6 1581 842 Op 1 8/0.053 + CDS 1663643 - 1664401 251 ## COG0491 Zn-dependent hydrolases, including glyoxylases 1582 842 Op 2 . + CDS 1664470 - 1665834 762 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 1665850 - 1665897 7.2 - Term 1665845 - 1665878 3.7 1583 843 Op 1 4/0.364 - CDS 1665887 - 1666660 641 ## COG0500 SAM-dependent methyltransferases - Term 1666682 - 1666737 6.3 1584 843 Op 2 1/0.716 - CDS 1666738 - 1667562 504 ## COG3021 Uncharacterized protein conserved in bacteria - Prom 1667585 - 1667644 3.2 1585 844 Tu 1 . - CDS 1667676 - 1668851 1064 ## COG2814 Arabinose efflux permease - Prom 1668881 - 1668940 2.4 + Prom 1668875 - 1668934 4.3 1586 845 Tu 1 . + CDS 1668956 - 1669861 523 ## COG0583 Transcriptional regulator + Term 1669931 - 1669973 7.3 - Term 1669827 - 1669856 2.1 1587 846 Tu 1 . - CDS 1669893 - 1670696 948 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 1670934 - 1670993 80.3 1588 847 Tu 1 . - CDS 1674662 - 1675228 464 ## COG0241 Histidinol phosphatase and related phosphatases - Prom 1675404 - 1675463 2.9 + Prom 1675286 - 1675345 3.9 1589 848 Op 1 32/0.000 + CDS 1675417 - 1676448 1131 ## COG1135 ABC-type metal ion transport system, ATPase component 1590 848 Op 2 22/0.000 + CDS 1676441 - 1677094 806 ## COG2011 ABC-type metal ion transport system, permease component 1591 848 Op 3 . + CDS 1677135 - 1677950 1128 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 1677973 - 1678009 7.6 + Prom 1677961 - 1678020 2.1 1592 849 Op 1 . + CDS 1678057 - 1678461 256 ## SG0248 outer membrane lipoprotein 1593 849 Op 2 6/0.121 + CDS 1678458 - 1679165 581 ## COG1720 Uncharacterized conserved protein + Term 1679229 - 1679256 -0.8 + Prom 1679172 - 1679231 1.9 1594 850 Tu 1 . + CDS 1679277 - 1680995 2185 ## COG0442 Prolyl-tRNA synthetase + Term 1680997 - 1681046 6.2 - Term 1680988 - 1681029 9.7 1595 851 Op 1 . - CDS 1681041 - 1681622 520 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance - Term 1681717 - 1681760 -0.9 1596 851 Op 2 5/0.231 - CDS 1681779 - 1682195 206 ## COG1186 Protein chain release factor B 1597 851 Op 3 . - CDS 1682192 - 1682737 629 ## COG4681 Uncharacterized protein conserved in bacteria - Prom 1682759 - 1682818 2.4 1598 852 Tu 1 . + CDS 1683126 - 1683380 261 ## COG4568 Transcriptional antiterminator + Term 1683528 - 1683562 0.5 - Term 1683376 - 1683406 5.0 1599 853 Op 1 2/0.587 - CDS 1683407 - 1684693 749 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Term 1684698 - 1684737 1.7 1600 853 Op 2 1/0.716 - CDS 1684752 - 1685141 446 ## COG0346 Lactoylglutathione lyase and related lyases - Term 1685165 - 1685203 1.2 1601 853 Op 3 3/0.483 - CDS 1685208 - 1687340 2163 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 1687362 - 1687421 5.4 - Term 1687391 - 1687420 0.4 1602 854 Op 1 7/0.083 - CDS 1687441 - 1688400 1313 ## COG0825 Acetyl-CoA carboxylase alpha subunit 1603 854 Op 2 6/0.121 - CDS 1688413 - 1691895 4070 ## COG0587 DNA polymerase III, alpha subunit 1604 854 Op 3 11/0.017 - CDS 1691934 - 1692530 525 ## COG0164 Ribonuclease HII 1605 854 Op 4 11/0.017 - CDS 1692527 - 1693675 1078 ## COG0763 Lipid A disaccharide synthetase 1606 854 Op 5 25/0.000 - CDS 1693675 - 1694463 651 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 1607 854 Op 6 18/0.000 - CDS 1694467 - 1694922 359 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases - Prom 1694948 - 1695007 3.5 - Term 1694952 - 1694998 12.2 1608 855 Op 1 15/0.006 - CDS 1695027 - 1696052 949 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1609 855 Op 2 17/0.000 - CDS 1696056 - 1696511 482 ## COG2825 Outer membrane protein 1610 855 Op 3 18/0.000 - CDS 1696674 - 1699091 2780 ## COG4775 Outer membrane protein/protective antigen OMA87 1611 855 Op 4 12/0.013 - CDS 1699123 - 1700475 976 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 1612 855 Op 5 32/0.000 - CDS 1700487 - 1701236 645 ## COG0575 CDP-diglyceride synthetase 1613 855 Op 6 7/0.083 - CDS 1701357 - 1702046 403 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 1702238 - 1702297 3.3 - Term 1702166 - 1702204 1.0 1614 856 Op 1 8/0.053 - CDS 1702301 - 1703500 973 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1615 856 Op 2 33/0.000 - CDS 1703593 - 1704114 647 ## COG0233 Ribosome recycling factor - Prom 1704209 - 1704268 4.3 1616 856 Op 3 24/0.000 - CDS 1704318 - 1705043 967 ## COG0528 Uridylate kinase - Prom 1705076 - 1705135 1.8 - Term 1705149 - 1705182 5.2 1617 856 Op 4 38/0.000 - CDS 1705193 - 1706044 1009 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 1706083 - 1706142 4.0 - Term 1706094 - 1706125 1.1 1618 856 Op 5 . - CDS 1706162 - 1706887 1222 ## PROTEIN SUPPORTED gi|206581012|ref|YP_002240343.1| ribosomal protein S2 1619 857 Tu 1 . - CDS 1706989 - 1707087 112 ## PROTEIN SUPPORTED gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 - Prom 1707194 - 1707253 2.9 + Prom 1707102 - 1707161 2.4 1620 858 Op 1 9/0.034 + CDS 1707209 - 1708003 966 ## COG0024 Methionine aminopeptidase + Term 1708007 - 1708040 4.5 1621 858 Op 2 5/0.231 + CDS 1708066 - 1710741 2581 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 1622 858 Op 3 . + CDS 1710774 - 1711598 989 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 1711615 - 1711642 1.5 + Prom 1711606 - 1711665 5.3 1623 859 Tu 1 . + CDS 1711710 - 1712096 436 ## ECL_00967 hypothetical protein + Term 1712105 - 1712137 4.0 - Term 1712088 - 1712129 6.4 1624 860 Tu 1 . - CDS 1712189 - 1713376 1466 ## COG3835 Sugar diacid utilization regulator - Term 1713453 - 1713483 3.0 1625 861 Tu 1 . - CDS 1713493 - 1714926 1527 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 1714976 - 1715035 2.2 1626 862 Tu 1 . - CDS 1715059 - 1716573 1114 ## COG0232 dGTP triphosphohydrolase - Prom 1716619 - 1716678 4.8 + Prom 1716569 - 1716628 2.9 1627 863 Op 1 5/0.231 + CDS 1716656 - 1717354 892 ## COG0775 Nucleoside phosphorylase 1628 863 Op 2 6/0.121 + CDS 1717356 - 1718156 470 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 1629 863 Op 3 . + CDS 1718180 - 1718803 709 ## COG2860 Predicted membrane protein - Term 1718791 - 1718854 3.0 1630 864 Op 1 3/0.483 - CDS 1718862 - 1719206 440 ## COG0316 Uncharacterized conserved protein 1631 864 Op 2 . - CDS 1719292 - 1720692 1681 ## COG0038 Chloride channel protein EriC - Prom 1720722 - 1720781 5.4 + Prom 1720778 - 1720837 6.7 1632 865 Tu 1 . + CDS 1720870 - 1722150 1591 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Term 1722098 - 1722135 1.0 1633 866 Op 1 33/0.000 - CDS 1722219 - 1724201 2439 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 1634 866 Op 2 14/0.008 - CDS 1724198 - 1725088 933 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 1635 866 Op 3 7/0.083 - CDS 1725088 - 1725885 181 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 1725894 - 1725926 5.0 1636 866 Op 4 5/0.231 - CDS 1725936 - 1728146 2550 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 1728200 - 1728259 4.4 - Term 1728337 - 1728374 7.1 1637 867 Tu 1 . - CDS 1728379 - 1730901 3209 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 1638 868 Tu 1 . - CDS 1731046 - 1733226 2037 ## COG1643 HrpA-like helicases + Prom 1733468 - 1733527 3.4 1639 869 Op 1 3/0.483 + CDS 1733549 - 1734103 320 ## COG1514 2'-5' RNA ligase 1640 869 Op 2 6/0.121 + CDS 1734093 - 1734797 424 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Prom 1734862 - 1734921 2.0 1641 870 Op 1 3/0.483 + CDS 1734974 - 1735429 626 ## COG1734 DnaK suppressor protein + Term 1735456 - 1735486 5.0 1642 870 Op 2 1/0.716 + CDS 1735489 - 1736379 602 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 1643 870 Op 3 7/0.083 + CDS 1736476 - 1737819 1599 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 1644 870 Op 4 4/0.364 + CDS 1737816 - 1738295 193 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 + Prom 1738330 - 1738389 5.0 1645 871 Op 1 19/0.000 + CDS 1738419 - 1739210 940 ## COG0413 Ketopantoate hydroxymethyltransferase 1646 871 Op 2 12/0.013 + CDS 1739222 - 1740073 886 ## COG0414 Panthothenate synthetase 1647 871 Op 3 . + CDS 1740106 - 1740486 489 ## COG0853 Aspartate 1-decarboxylase + Term 1740500 - 1740533 5.1 + Prom 1740868 - 1740927 5.0 1648 872 Op 1 . + CDS 1740950 - 1741534 609 ## ECL_00942 hypothetical protein + Term 1741551 - 1741588 4.1 1649 872 Op 2 10/0.021 + CDS 1741599 - 1742318 600 ## COG3121 P pilus assembly protein, chaperone PapD 1650 872 Op 3 6/0.121 + CDS 1742377 - 1744986 2841 ## COG3188 P pilus assembly protein, porin PapC 1651 872 Op 4 . + CDS 1745011 - 1745580 646 ## COG3539 P pilus assembly protein, pilin FimA 1652 872 Op 5 . + CDS 1745599 - 1746150 375 ## ECL_00938 putative fimbrial protein 1653 872 Op 6 . + CDS 1746174 - 1746776 469 ## ECL_00937 putative fimbrial protein 1654 872 Op 7 . + CDS 1746798 - 1747904 544 ## Rahaq_3529 fimbrial protein domain-containing protein 1655 873 Op 1 4/0.364 - CDS 1747906 - 1749204 1139 ## COG0726 Predicted xylanase/chitin deacetylase 1656 873 Op 2 3/0.483 - CDS 1749217 - 1749657 469 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 1749695 - 1749754 1.7 - Term 1749719 - 1749756 5.0 1657 874 Op 1 45/0.000 - CDS 1749763 - 1750533 1214 ## COG0842 ABC-type multidrug transport system, permease component 1658 874 Op 2 . - CDS 1750530 - 1751456 950 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Prom 1751467 - 1751526 2.5 1659 875 Tu 1 . + CDS 1751564 - 1752226 639 ## COG0288 Carbonic anhydrase - Term 1752220 - 1752259 5.2 1660 876 Tu 1 . - CDS 1752317 - 1752853 774 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 1752995 - 1753054 5.6 + Prom 1752964 - 1753023 7.6 1661 877 Tu 1 . + CDS 1753059 - 1755449 2819 ## COG4993 Glucose dehydrogenase + Term 1755503 - 1755542 5.2 - Term 1755444 - 1755483 -1.0 1662 878 Tu 1 . - CDS 1755535 - 1757094 1612 ## COG2132 Putative multicopper oxidases - Prom 1757164 - 1757223 3.0 + Prom 1757164 - 1757223 1.6 1663 879 Tu 1 . + CDS 1757279 - 1757587 346 ## Ent638_0670 hypothetical protein + Prom 1757609 - 1757668 2.4 1664 880 Op 1 9/0.034 + CDS 1757688 - 1758557 968 ## COG0421 Spermidine synthase 1665 880 Op 2 . + CDS 1758558 - 1759352 1072 ## COG1586 S-adenosylmethionine decarboxylase + Term 1759359 - 1759394 3.2 - Term 1759300 - 1759345 -0.4 1666 881 Tu 1 . - CDS 1759383 - 1759745 696 ## COG3112 Uncharacterized protein conserved in bacteria - Prom 1759818 - 1759877 6.7 - Term 1759875 - 1759913 6.0 1667 882 Tu 1 . - CDS 1759934 - 1762552 3527 ## COG1049 Aconitase B - Prom 1762624 - 1762683 5.4 1668 883 Tu 1 . + CDS 1763101 - 1763217 85 ## + Term 1763223 - 1763254 4.8 + Prom 1763237 - 1763296 3.2 1669 884 Op 1 . + CDS 1763423 - 1764949 1130 ## ECL_00917 hypothetical protein 1670 884 Op 2 . + CDS 1764960 - 1765751 616 ## ECL_00916 hypothetical protein + Term 1765836 - 1765879 1.6 - Term 1765784 - 1765812 1.0 1671 885 Tu 1 . - CDS 1765868 - 1767268 320 ## Pfl01_1574 hypothetical protein - Prom 1767461 - 1767520 4.6 - Term 1767492 - 1767528 7.3 1672 886 Op 1 30/0.000 - CDS 1767545 - 1768969 681 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 1769015 - 1769074 7.9 - Term 1769104 - 1769142 5.0 1673 886 Op 2 13/0.011 - CDS 1769145 - 1771046 1933 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 1674 886 Op 3 6/0.121 - CDS 1771061 - 1773724 3041 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component 1675 887 Tu 1 . - CDS 1773848 - 1774612 629 ## COG2186 Transcriptional regulators + Prom 1774899 - 1774958 5.4 1676 888 Tu 1 . + CDS 1775150 - 1776520 1722 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 1776530 - 1776571 10.2 + Prom 1776569 - 1776628 2.0 1677 889 Op 1 1/0.716 + CDS 1776685 - 1778082 559 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 1678 889 Op 2 . + CDS 1778093 - 1779043 1008 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase + Term 1779133 - 1779171 2.3 - Term 1778988 - 1779026 7.2 1679 890 Op 1 6/0.121 - CDS 1779062 - 1779916 1111 ## COG3725 Membrane protein required for beta-lactamase induction 1680 890 Op 2 . - CDS 1779913 - 1780476 572 ## COG3023 Negative regulator of beta-lactamase expression - Prom 1780687 - 1780746 2.3 + Prom 1780484 - 1780543 3.2 1681 891 Tu 1 . + CDS 1780564 - 1781457 440 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 1682 892 Op 1 8/0.053 + CDS 1781632 - 1782069 411 ## COG4969 Tfp pilus assembly protein, major pilin PilA 1683 892 Op 2 24/0.000 + CDS 1782082 - 1783461 861 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 1684 892 Op 3 . + CDS 1783451 - 1784635 987 ## COG1459 Type II secretory pathway, component PulF + Term 1784711 - 1784746 -0.7 1685 893 Tu 1 . - CDS 1784669 - 1785712 1118 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 1785885 - 1785944 5.5 + Prom 1785776 - 1785835 4.1 1686 894 Op 1 7/0.083 + CDS 1785941 - 1786561 557 ## COG0237 Dephospho-CoA kinase 1687 894 Op 2 7/0.083 + CDS 1786561 - 1787304 812 ## COG4582 Uncharacterized protein conserved in bacteria 1688 894 Op 3 . + CDS 1787314 - 1787508 140 ## COG3024 Uncharacterized protein conserved in bacteria 1689 895 Tu 1 8/0.053 - CDS 1787543 - 1787935 361 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 1787943 - 1787973 3.0 1690 896 Op 1 . - CDS 1787993 - 1790698 3679 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 1691 896 Op 2 . - CDS 1790757 - 1791191 386 ## ECL_00894 SecA regulator SecM - Prom 1791316 - 1791375 2.7 - Term 1791458 - 1791513 6.4 1692 897 Tu 1 . - CDS 1791540 - 1792457 971 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 1693 898 Op 1 35/0.000 - CDS 1792559 - 1793710 1498 ## COG0206 Cell division GTPase 1694 898 Op 2 25/0.000 - CDS 1793773 - 1795029 1184 ## COG0849 Actin-like ATPase involved in cell division 1695 898 Op 3 18/0.000 - CDS 1795026 - 1795868 572 ## COG1589 Cell division septal protein 1696 898 Op 4 11/0.017 - CDS 1795870 - 1796790 1033 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 1697 898 Op 5 26/0.000 - CDS 1796783 - 1798258 1549 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Term 1798280 - 1798312 3.8 1698 898 Op 6 31/0.000 - CDS 1798318 - 1799382 1107 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 1699 898 Op 7 25/0.000 - CDS 1799379 - 1800623 1363 ## COG0772 Bacterial cell division membrane protein 1700 898 Op 8 28/0.000 - CDS 1800623 - 1801939 1308 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 1701 898 Op 9 28/0.000 - CDS 1801942 - 1803024 1584 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 1702 898 Op 10 26/0.000 - CDS 1803018 - 1804376 1718 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 1703 898 Op 11 26/0.000 - CDS 1804373 - 1805788 1512 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 1704 898 Op 12 12/0.013 - CDS 1805847 - 1807613 1470 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 1705 898 Op 13 12/0.013 - CDS 1807629 - 1807994 230 ## COG3116 Cell division protein 1706 898 Op 14 29/0.000 - CDS 1807991 - 1808932 779 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 1707 898 Op 15 4/0.364 - CDS 1808935 - 1809393 313 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 1809438 - 1809497 4.4 - Term 1809944 - 1809974 3.4 1708 899 Tu 1 . - CDS 1809985 - 1810989 1115 ## COG1609 Transcriptional regulators - Prom 1811037 - 1811096 4.3 - Term 1811109 - 1811141 1.3 1709 900 Op 1 32/0.000 - CDS 1811164 - 1811658 518 ## COG0440 Acetolactate synthase, small (regulatory) subunit 1710 900 Op 2 2/0.587 - CDS 1811660 - 1813384 1870 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 1813706 - 1813755 9.3 1711 901 Tu 1 . - CDS 1813761 - 1814705 326 ## COG0583 Transcriptional regulator + Prom 1815421 - 1815480 2.3 1712 902 Op 1 11/0.017 + CDS 1815512 - 1817083 1886 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 1713 902 Op 2 10/0.021 + CDS 1817083 - 1818174 1328 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 1714 902 Op 3 30/0.000 + CDS 1818177 - 1819577 1727 ## COG0065 3-isopropylmalate dehydratase large subunit 1715 902 Op 4 . + CDS 1819588 - 1820193 806 ## COG0066 3-isopropylmalate dehydratase small subunit - Term 1820217 - 1820249 0.3 1716 903 Tu 1 . - CDS 1820286 - 1820438 170 ## ECL_00868 small toxic polypeptide - Prom 1820464 - 1820523 2.8 - Term 1820458 - 1820507 3.8 1717 904 Tu 1 . - CDS 1820655 - 1821833 1423 ## COG0477 Permeases of the major facilitator superfamily + Prom 1822097 - 1822156 2.6 1718 905 Tu 1 . + CDS 1822194 - 1823849 1466 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 1823966 - 1824003 1.4 1719 906 Op 1 14/0.008 + CDS 1824018 - 1825001 1122 ## COG4143 ABC-type thiamine transport system, periplasmic component 1720 906 Op 2 11/0.017 + CDS 1824977 - 1826587 1914 ## COG1178 ABC-type Fe3+ transport system, permease component 1721 906 Op 3 . + CDS 1826571 - 1827272 302 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1722 907 Tu 1 . - CDS 1827316 - 1828083 906 ## COG0586 Uncharacterized membrane-associated protein - Prom 1828106 - 1828165 2.7 1723 908 Tu 1 . - CDS 1828202 - 1829047 903 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 1829223 - 1829282 3.0 + Prom 1829255 - 1829314 3.2 1724 909 Op 1 7/0.083 + CDS 1829386 - 1831095 1863 ## COG1069 Ribulose kinase 1725 909 Op 2 5/0.231 + CDS 1831106 - 1832608 2126 ## COG2160 L-arabinose isomerase 1726 909 Op 3 3/0.483 + CDS 1832697 - 1833392 968 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 1833466 - 1833500 1.0 + Prom 1833425 - 1833484 5.8 1727 910 Tu 1 . + CDS 1833509 - 1835866 2294 ## COG0417 DNA polymerase elongation subunit (family B) 1728 911 Op 1 7/0.083 + CDS 1835994 - 1838900 3696 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 1729 911 Op 2 . + CDS 1838913 - 1839572 227 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Term 1839578 - 1839610 6.3 - Term 1839566 - 1839598 6.3 1730 912 Tu 1 . - CDS 1839604 - 1840419 912 ## COG1076 DnaJ-domain-containing proteins 1 - Prom 1840640 - 1840699 3.5 + Prom 1840456 - 1840515 3.2 1731 913 Op 1 16/0.000 + CDS 1840659 - 1843010 2452 ## COG1452 Organic solvent tolerance protein OstA 1732 913 Op 2 13/0.011 + CDS 1843064 - 1844350 1402 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 1733 913 Op 3 12/0.013 + CDS 1844350 - 1845336 450 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 1734 913 Op 4 8/0.053 + CDS 1845333 - 1846154 923 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 1735 913 Op 5 8/0.053 + CDS 1846158 - 1846535 462 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 1736 913 Op 6 . + CDS 1846540 - 1847388 1038 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 1737 914 Tu 1 . - CDS 1847428 - 1847907 660 ## COG0262 Dihydrofolate reductase - Prom 1847933 - 1847992 2.8 1738 915 Op 1 7/0.083 - CDS 1848022 - 1849887 1013 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 1739 915 Op 2 . - CDS 1849880 - 1850410 466 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 1850644 - 1850703 5.6 + Prom 1850984 - 1851043 1.7 1740 916 Tu 1 . + CDS 1851083 - 1853812 2647 ## COG3468 Type V secretory pathway, adhesin AidA + Term 1853823 - 1853877 12.3 - Term 1853823 - 1853854 4.1 1741 917 Tu 1 . - CDS 1853862 - 1854095 290 ## ECL_00841 hypothetical protein - Prom 1854135 - 1854194 3.2 - Term 1854195 - 1854242 0.6 1742 918 Op 1 24/0.000 - CDS 1854278 - 1857502 4596 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 1743 918 Op 2 8/0.053 - CDS 1857521 - 1858564 1051 ## COG0505 Carbamoylphosphate synthase small subunit - Term 1859038 - 1859069 3.1 1744 919 Tu 1 . - CDS 1859124 - 1859945 854 ## COG0289 Dihydrodipicolinate reductase - Prom 1859977 - 1860036 2.5 - Term 1859979 - 1860009 -1.0 1745 920 Tu 1 . - CDS 1860078 - 1861085 728 ## COG1609 Transcriptional regulators - Prom 1861258 - 1861317 4.2 + Prom 1861067 - 1861126 3.3 1746 921 Op 1 . + CDS 1861274 - 1863016 1576 ## COG1482 Phosphomannose isomerase 1747 921 Op 2 9/0.034 + CDS 1863019 - 1863447 419 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 1748 921 Op 3 13/0.011 + CDS 1863458 - 1863952 647 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 1749 921 Op 4 13/0.011 + CDS 1863963 - 1864760 1047 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 1750 921 Op 5 . + CDS 1864760 - 1865578 962 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 1865584 - 1865614 4.1 - Term 1865571 - 1865601 4.1 1751 922 Op 1 . - CDS 1865605 - 1866375 693 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes 1752 922 Op 2 . - CDS 1866368 - 1866922 371 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes - Prom 1866957 - 1867016 3.7 - Term 1867018 - 1867065 7.1 1753 923 Op 1 7/0.083 - CDS 1867080 - 1868030 431 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 1754 923 Op 2 7/0.083 - CDS 1868032 - 1868481 265 ## PROTEIN SUPPORTED gi|225086978|ref|YP_002658248.1| ribosomal protein S2 1755 923 Op 3 16/0.000 - CDS 1868563 - 1869063 710 ## COG0597 Lipoprotein signal peptidase 1756 923 Op 4 16/0.000 - CDS 1869063 - 1871879 3261 ## COG0060 Isoleucyl-tRNA synthetase 1757 923 Op 5 . - CDS 1871925 - 1872851 411 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 1758 923 Op 6 . - CDS 1872926 - 1873129 62 ## - Prom 1873274 - 1873333 5.2 + Prom 1872894 - 1872953 4.2 1759 924 Tu 1 . + CDS 1873180 - 1873443 418 ## PROTEIN SUPPORTED gi|146310246|ref|YP_001175320.1| 30S ribosomal protein S20 + Term 1873466 - 1873508 8.1 - Term 1873462 - 1873488 -0.7 1760 925 Op 1 5/0.231 - CDS 1873502 - 1874401 936 ## COG0583 Transcriptional regulator 1761 925 Op 2 1/0.716 - CDS 1874460 - 1875635 1342 ## COG3004 Na+/H+ antiporter - Prom 1875721 - 1875780 4.7 - Term 1875750 - 1875781 4.1 1762 926 Op 1 31/0.000 - CDS 1875809 - 1876954 1345 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 1763 926 Op 2 . - CDS 1877042 - 1878955 2305 ## COG0443 Molecular chaperone 1764 926 Op 3 . - CDS 1878907 - 1879101 92 ## - Prom 1879122 - 1879181 2.5 + Prom 1878979 - 1879038 3.4 1765 927 Tu 1 . + CDS 1879252 - 1879818 863 ## COG1584 Predicted membrane protein 1766 928 Tu 1 . - CDS 1879795 - 1881117 1238 ## COG0477 Permeases of the major facilitator superfamily - Prom 1881153 - 1881212 3.5 1767 929 Tu 1 . - CDS 1881240 - 1881833 688 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Prom 1881855 - 1881914 3.1 1768 930 Tu 1 . - CDS 1881938 - 1882891 1277 ## COG0176 Transaldolase - Prom 1883063 - 1883122 3.7 + Prom 1882920 - 1882979 3.6 1769 931 Op 1 5/0.231 + CDS 1883154 - 1884587 815 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 + Term 1884602 - 1884645 4.4 1770 931 Op 2 . + CDS 1884654 - 1885427 965 ## COG3022 Uncharacterized protein conserved in bacteria + Term 1885435 - 1885464 3.5 - Term 1885423 - 1885452 3.5 1771 932 Tu 1 . - CDS 1885460 - 1885717 172 ## ECL_00817 hypothetical protein - Prom 1885897 - 1885956 2.7 - Term 1885909 - 1885948 5.2 1772 933 Op 1 19/0.000 - CDS 1886005 - 1887291 1998 ## COG0498 Threonine synthase 1773 933 Op 2 11/0.017 - CDS 1887295 - 1888224 1183 ## COG0083 Homoserine kinase 1774 933 Op 3 . - CDS 1888226 - 1890688 2915 ## COG0527 Aspartokinases - Prom 1890880 - 1890939 2.9 - Term 1890927 - 1890959 2.7 1775 934 Tu 1 . - CDS 1891049 - 1891735 505 ## COG0565 rRNA methylase - Prom 1891795 - 1891854 6.0 1776 935 Tu 1 . + CDS 1892371 - 1893087 861 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 1893104 - 1893146 6.9 - Term 1893100 - 1893127 1.5 1777 936 Op 1 6/0.121 - CDS 1893134 - 1894483 1353 ## COG4452 Inner membrane protein involved in colicin E2 resistance 1778 936 Op 2 40/0.000 - CDS 1894543 - 1895967 1020 ## COG0642 Signal transduction histidine kinase 1779 936 Op 3 4/0.364 - CDS 1895967 - 1896656 524 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1780 936 Op 4 . - CDS 1896671 - 1897141 586 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 1897168 - 1897227 5.3 + Prom 1897100 - 1897159 5.1 1781 937 Tu 1 . + CDS 1897357 - 1898226 886 ## COG2207 AraC-type DNA-binding domain-containing proteins 1782 938 Tu 1 . - CDS 1898223 - 1898870 739 ## COG0406 Fructose-2,6-bisphosphatase - Prom 1898961 - 1899020 2.0 + Prom 1898837 - 1898896 6.4 1783 939 Tu 1 . + CDS 1898920 - 1899435 538 ## COG1986 Uncharacterized conserved protein 1784 940 Op 1 4/0.364 - CDS 1899426 - 1899755 380 ## COG2973 Trp operon repressor 1785 940 Op 2 . - CDS 1899811 - 1901748 2102 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 1901910 - 1901969 1.7 + Prom 1901851 - 1901910 2.1 1786 941 Tu 1 . + CDS 1901996 - 1903642 2291 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 1903704 - 1903742 1.0 1787 942 Tu 1 . - CDS 1903735 - 1904634 986 ## COG0583 Transcriptional regulator + Prom 1904654 - 1904713 1.9 1788 943 Tu 1 . + CDS 1904743 - 1905744 1170 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 1905876 - 1905922 -0.3 1789 944 Op 1 1/0.716 - CDS 1905918 - 1907150 1594 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism 1790 944 Op 2 5/0.231 - CDS 1907186 - 1908571 1471 ## COG1066 Predicted ATP-dependent serine protease 1791 944 Op 3 . - CDS 1908583 - 1909551 1206 ## COG0560 Phosphoserine phosphatase - Prom 1909601 - 1909660 3.7 + Prom 1909496 - 1909555 1.5 1792 945 Op 1 2/0.587 + CDS 1909669 - 1910313 758 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression 1793 945 Op 2 . + CDS 1910353 - 1911366 850 ## COG0095 Lipoate-protein ligase A + Prom 1911371 - 1911430 8.3 1794 946 Tu 1 . + CDS 1911533 - 1912216 477 ## SeAg_B4896 putative outer membrane protein + Term 1912234 - 1912269 6.1 - Term 1912215 - 1912265 10.2 1795 947 Op 1 . - CDS 1912272 - 1912991 1056 ## COG0813 Purine-nucleoside phosphorylase - Prom 1913045 - 1913104 1.8 1796 947 Op 2 4/0.364 - CDS 1913117 - 1914340 1777 ## COG1015 Phosphopentomutase 1797 947 Op 3 7/0.083 - CDS 1914394 - 1915728 1723 ## COG0213 Thymidine phosphorylase - Prom 1915748 - 1915807 2.1 1798 947 Op 4 . - CDS 1915817 - 1916596 1040 ## COG0274 Deoxyribose-phosphate aldolase - Prom 1916618 - 1916677 5.0 + Prom 1916693 - 1916752 2.8 1799 948 Op 1 . + CDS 1916859 - 1918394 1817 ## ECL_00792 hypothetical protein 1800 948 Op 2 . + CDS 1918369 - 1919229 541 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 1919150 - 1919182 -1.0 1801 949 Op 1 4/0.364 - CDS 1919224 - 1920003 691 ## COG0084 Mg-dependent DNase 1802 949 Op 2 3/0.483 - CDS 1920003 - 1921055 939 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 1921083 - 1921142 1.9 - Term 1921117 - 1921148 2.1 1803 950 Tu 1 . - CDS 1921178 - 1921339 143 ## COG5487 Small integral membrane protein 1804 951 Tu 1 . - CDS 1921465 - 1922082 721 ## COG2823 Predicted periplasmic or secreted lipoprotein - Prom 1922230 - 1922289 4.0 - Term 1922343 - 1922376 6.1 1805 952 Op 1 3/0.483 - CDS 1922387 - 1923976 2163 ## COG4108 Peptide chain release factor RF-3 1806 952 Op 2 4/0.364 - CDS 1924069 - 1924746 815 ## COG1011 Predicted hydrolase (HAD superfamily) 1807 952 Op 3 8/0.053 - CDS 1924766 - 1925209 696 ## PROTEIN SUPPORTED gi|146310196|ref|YP_001175270.1| ribosomal-protein-alanine N-acetyltransferase 1808 952 Op 4 . - CDS 1925178 - 1925591 461 ## COG3050 DNA polymerase III, psi subunit - Prom 1925613 - 1925672 1.5 + Prom 1925611 - 1925670 4.0 1809 953 Tu 1 . + CDS 1925693 - 1926721 249 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative + Term 1926733 - 1926769 5.5 + TRNA 1926866 - 1926952 69.1 # Leu CAG 0 0 + TRNA 1926981 - 1927066 66.9 # Leu CAG 0 0 + TRNA 1927099 - 1927185 69.1 # Leu CAG 0 0 - Term 1927081 - 1927150 18.1 1810 954 Tu 1 . - CDS 1927227 - 1927457 177 ## ECL_00781 hypothetical protein - Prom 1927631 - 1927690 5.1 + Prom 1927632 - 1927691 5.9 1811 955 Op 1 1/0.716 + CDS 1927713 - 1928777 910 ## COG2199 FOG: GGDEF domain + Prom 1928784 - 1928843 4.2 1812 955 Op 2 . + CDS 1928873 - 1929661 647 ## COG4114 Uncharacterized Fe-S protein + Term 1929710 - 1929751 8.1 - Term 1929697 - 1929737 6.5 1813 956 Tu 1 . - CDS 1929745 - 1931091 1546 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Prom 1931327 - 1931386 3.3 1814 957 Tu 1 . + CDS 1931420 - 1931878 401 ## COG2606 Uncharacterized conserved protein + Term 1931883 - 1931919 5.6 1815 958 Op 1 . - CDS 1931916 - 1932602 416 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 1816 958 Op 2 . - CDS 1932548 - 1933234 292 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 1933436 - 1933495 6.2 + Prom 1933494 - 1933553 8.3 1817 959 Op 1 12/0.013 + CDS 1933674 - 1934450 376 ## COG2966 Uncharacterized conserved protein 1818 959 Op 2 . + CDS 1934441 - 1934914 572 ## COG3610 Uncharacterized conserved protein 1819 959 Op 3 5/0.231 + CDS 1934959 - 1935411 466 ## COG1846 Transcriptional regulators + Prom 1935413 - 1935472 2.8 1820 959 Op 4 . + CDS 1935497 - 1935925 570 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Prom 1935955 - 1936014 2.3 1821 960 Op 1 . + CDS 1936049 - 1936594 480 ## COG5529 Pyocin large subunit 1822 960 Op 2 . + CDS 1936591 - 1937328 849 ## COG1484 DNA replication protein 1823 960 Op 3 . + CDS 1937413 - 1937895 591 ## ECL_00763 hypothetical protein + Prom 1937956 - 1938015 3.2 1824 961 Tu 1 . + CDS 1938179 - 1940458 2522 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 1940467 - 1940501 5.7 + Prom 1940528 - 1940587 8.3 1825 962 Tu 1 . + CDS 1940639 - 1941277 442 ## CKO_02620 hypothetical protein 1826 963 Op 1 . + CDS 1941423 - 1941923 543 ## gi|237731359|ref|ZP_04561840.1| predicted protein 1827 963 Op 2 10/0.021 + CDS 1941965 - 1942705 466 ## COG3121 P pilus assembly protein, chaperone PapD 1828 963 Op 3 . + CDS 1942623 - 1944917 1929 ## COG3188 P pilus assembly protein, porin PapC 1829 963 Op 4 . + CDS 1944950 - 1945864 761 ## ACIAD3333 putative lipoprotein + Prom 1945866 - 1945925 3.5 1830 964 Op 1 . + CDS 1945993 - 1946733 571 ## COG3710 DNA-binding winged-HTH domains 1831 964 Op 2 . + CDS 1946735 - 1947208 467 ## gi|260769382|ref|ZP_05878315.1| hypothetical protein VFA_002440 1832 964 Op 3 . + CDS 1947238 - 1947744 429 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 1947771 - 1947807 -0.9 1833 965 Op 1 . - CDS 1947881 - 1949545 2295 ## COG0840 Methyl-accepting chemotaxis protein 1834 965 Op 2 . - CDS 1949629 - 1950069 592 ## COG1846 Transcriptional regulators - Prom 1950139 - 1950198 5.9 + Prom 1950163 - 1950222 7.4 1835 966 Op 1 3/0.483 + CDS 1950339 - 1951616 1602 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 1836 966 Op 2 4/0.364 + CDS 1951613 - 1953079 1931 ## COG1012 NAD-dependent aldehyde dehydrogenases 1837 966 Op 3 4/0.364 + CDS 1953082 - 1953933 953 ## COG3384 Uncharacterized conserved protein 1838 966 Op 4 2/0.587 + CDS 1953943 - 1954323 562 ## COG3232 5-carboxymethyl-2-hydroxymuconate isomerase + Prom 1954379 - 1954438 50.1 1839 967 Op 1 5/0.231 + CDS 1954470 - 1955273 978 ## COG3971 2-keto-4-pentenoate hydratase 1840 967 Op 2 6/0.121 + CDS 1955284 - 1956081 1020 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1841 967 Op 3 5/0.231 + CDS 1956103 - 1957449 1794 ## COG0477 Permeases of the major facilitator superfamily 1842 967 Op 4 . + CDS 1957421 - 1958347 967 ## COG2207 AraC-type DNA-binding domain-containing proteins 1843 968 Op 1 4/0.364 + CDS 1958532 - 1960094 2043 ## COG2368 Aromatic ring hydroxylase 1844 968 Op 2 . + CDS 1960112 - 1960621 655 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 1960729 - 1960770 0.8 + Prom 1960691 - 1960750 1.8 1845 969 Op 1 9/0.034 + CDS 1960954 - 1963107 2966 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 1963157 - 1963194 -1.0 + Prom 1963117 - 1963176 1.6 1846 969 Op 2 3/0.483 + CDS 1963204 - 1963407 289 ## COG2879 Uncharacterized small protein 1847 969 Op 3 . + CDS 1963418 - 1964371 1254 ## COG0523 Putative GTPases (G3E family) + Term 1964377 - 1964417 6.1 + Prom 1964482 - 1964541 5.5 1848 970 Tu 1 . + CDS 1964603 - 1966405 701 ## COG0210 Superfamily I DNA and RNA helicases - Term 1966416 - 1966451 8.5 1849 971 Tu 1 . - CDS 1966470 - 1967828 1692 ## COG4222 Uncharacterized protein conserved in bacteria + Prom 1968153 - 1968212 6.3 1850 972 Tu 1 . + CDS 1968240 - 1968785 778 ## Kvar_4483 YfaZ family protein + Term 1968925 - 1968961 2.3 - Term 1968918 - 1968944 -1.0 1851 973 Tu 1 . - CDS 1968961 - 1970331 1922 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 1970422 - 1970481 2.8 1852 974 Tu 1 . + CDS 1970647 - 1971918 1515 ## COG2733 Predicted membrane protein 1853 975 Op 1 . - CDS 1971915 - 1972991 1408 ## ECL_00736 hypothetical protein 1854 975 Op 2 7/0.083 - CDS 1972981 - 1974045 1379 ## COG1566 Multidrug resistance efflux pump 1855 975 Op 3 . - CDS 1974045 - 1974515 460 ## COG1846 Transcriptional regulators - Prom 1974538 - 1974597 3.0 1856 976 Op 1 . - CDS 1974662 - 1975357 468 ## COG0640 Predicted transcriptional regulators 1857 976 Op 2 . - CDS 1975332 - 1975727 444 ## ECL_00732 amino acid-binding ACT domain protein 1858 976 Op 3 . - CDS 1975720 - 1976043 275 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides - Term 1976079 - 1976124 -0.9 1859 977 Tu 1 . - CDS 1976196 - 1977611 1609 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 1977628 - 1977687 2.7 1860 978 Tu 1 . + CDS 1977712 - 1978614 956 ## COG0583 Transcriptional regulator + Term 1978693 - 1978721 -0.9 1861 979 Tu 1 . - CDS 1978601 - 1979080 718 ## COG2128 Uncharacterized conserved protein - Prom 1979137 - 1979196 3.9 1862 980 Tu 1 . + CDS 1979183 - 1980571 1475 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 1980756 - 1980801 -0.4 - Term 1980564 - 1980604 5.4 1863 981 Tu 1 . - CDS 1980657 - 1980818 233 ## ECL_00724 hypothetical protein - Prom 1980977 - 1981036 2.9 + Prom 1980600 - 1980659 2.0 1864 982 Tu 1 . + CDS 1980854 - 1982410 1437 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 1982462 - 1982506 7.0 - Term 1982449 - 1982492 7.0 1865 983 Tu 1 . - CDS 1982519 - 1982752 286 ## COG3798 Uncharacterized protein conserved in bacteria - Prom 1982902 - 1982961 7.2 + Prom 1982861 - 1982920 3.4 1866 984 Tu 1 . + CDS 1982948 - 1983157 203 ## gi|295098458|emb|CBK87548.1| hypothetical protein ENC_44360 + Term 1983160 - 1983205 9.4 1867 985 Tu 1 . - CDS 1983204 - 1984325 1483 ## COG2850 Uncharacterized conserved protein - Prom 1984351 - 1984410 3.0 1868 986 Tu 1 . - CDS 1984460 - 1985065 984 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 1985214 - 1985273 5.3 + Prom 1985195 - 1985254 10.1 1869 987 Tu 1 . + CDS 1985366 - 1985983 558 ## COG4566 Response regulator 1870 988 Op 1 1/0.716 - CDS 1985987 - 1991572 5253 ## COG3899 Predicted ATPase 1871 988 Op 2 . - CDS 1991582 - 1991962 383 ## COG0784 FOG: CheY-like receiver 1872 988 Op 3 . - CDS 1991986 - 1992246 310 ## COG4317 Uncharacterized protein conserved in bacteria 1873 988 Op 4 . - CDS 1992243 - 1992464 309 ## ECL_00714 hypothetical protein - Term 1992472 - 1992521 5.3 1874 988 Op 5 . - CDS 1992526 - 1993212 1160 ## COG1335 Amidases related to nicotinamidase - Prom 1993354 - 1993413 4.0 + Prom 1993292 - 1993351 7.2 1875 989 Op 1 2/0.587 + CDS 1993434 - 1995305 2346 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 1876 989 Op 2 2/0.587 + CDS 1995305 - 1995712 508 ## COG2259 Predicted membrane protein 1877 989 Op 3 8/0.053 + CDS 1995709 - 1997328 1948 ## COG0477 Permeases of the major facilitator superfamily 1878 989 Op 4 . + CDS 1997359 - 1998180 1320 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 1998275 - 1998311 0.2 - Term 1998082 - 1998114 0.6 1879 990 Tu 1 . - CDS 1998211 - 1999338 1242 ## ECL_00707 hypothetical protein - Prom 1999367 - 1999426 4.0 + Prom 1999310 - 1999369 5.8 1880 991 Tu 1 . + CDS 1999450 - 2000460 1095 ## COG1609 Transcriptional regulators + Term 2000584 - 2000621 3.1 1881 992 Tu 1 . + CDS 2000653 - 2001654 1280 ## COG0180 Tryptophanyl-tRNA synthetase + Term 2001764 - 2001822 -1.0 1882 993 Tu 1 . + CDS 2002243 - 2002614 212 ## Pvag_3751 hypothetical protein + Term 2002623 - 2002676 13.1 1883 994 Tu 1 . - CDS 2002673 - 2003140 283 ## ECL_00703 hypothetical protein - Prom 2003259 - 2003318 4.5 1884 995 Tu 1 . + CDS 2003441 - 2004310 602 ## COG3440 Predicted restriction endonuclease + Term 2004311 - 2004344 -0.7 - Term 2004642 - 2004669 1.5 1885 996 Op 1 . - CDS 2004680 - 2007013 776 ## COG3378 Predicted ATPase 1886 996 Op 2 . - CDS 2007028 - 2007351 168 ## ECO26_5447 hypothetical protein 1887 996 Op 3 . - CDS 2007348 - 2007572 173 ## ECO26_5446 hypothetical protein 1888 996 Op 4 . - CDS 2007572 - 2007901 314 ## ECO26_5445 putative repressor protein - Prom 2008045 - 2008104 4.1 - Term 2007962 - 2007988 -0.6 1889 997 Tu 1 . - CDS 2008117 - 2008377 181 ## COG3311 Predicted transcriptional regulator - Prom 2008500 - 2008559 7.4 1890 998 Op 1 . + CDS 2009283 - 2010035 601 ## ECO26_5443 putative head size determination protein 1891 998 Op 2 . + CDS 2010032 - 2010586 126 ## ECO26_5442 putative polarity suppression protein 1892 998 Op 3 . + CDS 2010588 - 2010860 117 ## ECO26_5441 putative transcription activator + Term 2010883 - 2010914 2.1 + Prom 2012680 - 2012739 2.6 1893 999 Tu 1 . + CDS 2012765 - 2013241 -72 ## KP1_0578 putative exonuclease 1894 1000 Tu 1 . + CDS 2014302 - 2014901 -253 ## KP1_0577 putative helicase 1895 1001 Tu 1 . - CDS 2014934 - 2016205 395 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - Prom 2016225 - 2016284 4.8 - TRNA 2016357 - 2016441 79.1 # Leu CAA 0 0 1896 1002 Op 1 . - CDS 2016547 - 2017269 832 ## ECL_00681 hypothetical protein 1897 1002 Op 2 1/0.716 - CDS 2017300 - 2018058 1067 ## COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA - Term 2018064 - 2018095 4.8 1898 1002 Op 3 . - CDS 2018105 - 2018530 799 ## COG3076 Uncharacterized protein conserved in bacteria + Prom 2018600 - 2018659 7.2 1899 1003 Tu 1 . + CDS 2018695 - 2019699 1324 ## COG0078 Ornithine carbamoyltransferase + Term 2019799 - 2019827 -0.3 + Prom 2019758 - 2019817 4.1 1900 1004 Tu 1 . + CDS 2019886 - 2020644 1015 ## COG1414 Transcriptional regulator 1901 1005 Op 1 3/0.483 - CDS 2020649 - 2022259 2070 ## COG3507 Beta-xylosidase 1902 1005 Op 2 1/0.716 - CDS 2022271 - 2023653 2057 ## COG2211 Na+/melibiose symporter and related transporters - Prom 2023755 - 2023814 6.9 - Term 2023814 - 2023870 11.4 1903 1006 Op 1 2/0.587 - CDS 2023880 - 2025847 2313 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 1904 1006 Op 2 . - CDS 2025862 - 2026791 1292 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 2026824 - 2026883 4.5 - Term 2026950 - 2026984 8.3 1905 1007 Tu 1 . - CDS 2027004 - 2027456 681 ## COG2731 Beta-galactosidase, beta subunit - Prom 2027696 - 2027755 8.7 1906 1008 Op 1 2/0.587 + CDS 2028131 - 2029351 628 ## PROTEIN SUPPORTED gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 1907 1008 Op 2 8/0.053 + CDS 2029361 - 2030272 1235 ## COG0549 Carbamate kinase + Term 2030376 - 2030443 18.5 + Prom 2030366 - 2030425 50.4 1908 1009 Op 1 3/0.483 + CDS 2030462 - 2031466 1594 ## COG0078 Ornithine carbamoyltransferase 1909 1009 Op 2 1/0.716 + CDS 2031514 - 2032917 1862 ## COG1288 Predicted membrane protein + Term 2032925 - 2032982 11.1 1910 1010 Tu 1 . + CDS 2032989 - 2033477 489 ## COG1438 Arginine repressor + Term 2033606 - 2033647 -0.5 + Prom 2033500 - 2033559 5.2 1911 1011 Op 1 19/0.000 + CDS 2033717 - 2034649 1215 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 1912 1011 Op 2 6/0.121 + CDS 2034662 - 2035123 601 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit + Term 2035141 - 2035180 4.0 1913 1011 Op 3 . + CDS 2035198 - 2035584 564 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 2035599 - 2035636 5.5 + Prom 2035632 - 2035691 3.5 1914 1012 Tu 1 . + CDS 2035721 - 2037169 1675 ## COG3397 Uncharacterized protein conserved in bacteria 1915 1013 Tu 1 . - CDS 2037482 - 2039866 2679 ## COG3525 N-acetyl-beta-hexosaminidase - Prom 2040043 - 2040102 80.4 1916 1014 Tu 1 . - CDS 2040221 - 2042929 3627 ## COG0474 Cation transport ATPase + Prom 2043220 - 2043279 3.1 1917 1015 Tu 1 . + CDS 2043316 - 2044263 1008 ## COG1609 Transcriptional regulators 1918 1016 Tu 1 . - CDS 2044344 - 2044823 333 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 2044957 - 2045016 3.8 1919 1017 Tu 1 . - CDS 2045052 - 2045744 292 ## NT01EI_3419 hypothetical protein - Prom 2045866 - 2045925 5.6 + Prom 2045851 - 2045910 7.4 1920 1018 Op 1 9/0.034 + CDS 2046128 - 2047546 1940 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1921 1018 Op 2 . + CDS 2047598 - 2049253 2193 ## COG0366 Glycosidases + Term 2049261 - 2049294 4.0 + Prom 2049281 - 2049340 9.7 1922 1019 Tu 1 . + CDS 2049527 - 2050135 651 ## CKO_03573 hypothetical protein + Term 2050332 - 2050356 -0.3 1923 1020 Tu 1 . - CDS 2050144 - 2050803 393 ## COG1737 Transcriptional regulators - Prom 2050825 - 2050884 4.4 + Prom 2050898 - 2050957 4.8 1924 1021 Op 1 2/0.587 + CDS 2050983 - 2052380 1678 ## COG1299 Phosphotransferase system, fructose-specific IIC component 1925 1021 Op 2 1/0.716 + CDS 2052391 - 2054988 1888 ## COG0383 Alpha-mannosidase 1926 1021 Op 3 . + CDS 2054990 - 2055571 419 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Term 2055572 - 2055608 3.2 + Prom 2055697 - 2055756 4.4 1927 1022 Tu 1 . + CDS 2055932 - 2058070 2813 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 1928 1023 Tu 1 . + CDS 2058176 - 2058640 496 ## COG0602 Organic radical activating enzymes - Term 2058634 - 2058666 -0.2 1929 1024 Op 1 . - CDS 2058673 - 2060583 2247 ## COG3711 Transcriptional antiterminator 1930 1024 Op 2 . - CDS 2060603 - 2061739 1339 ## COG2706 3-carboxymuconate cyclase 1931 1024 Op 3 . - CDS 2061834 - 2062574 1073 ## ECL_00649 hypothetical protein 1932 1024 Op 4 1/0.716 - CDS 2062571 - 2063689 1437 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 1933 1024 Op 5 . - CDS 2063673 - 2064806 1292 ## COG3964 Predicted amidohydrolase 1934 1024 Op 6 . - CDS 2064849 - 2065490 1175 ## ECL_00646 hypothetical protein 1935 1024 Op 7 . - CDS 2065504 - 2066280 941 ## ECL_00645 hypothetical protein 1936 1024 Op 8 . - CDS 2066303 - 2066602 314 ## ECL_00644 putative cytoplasmic protein 1937 1024 Op 9 . - CDS 2066605 - 2066967 553 ## ECL_00643 hypothetical protein 1938 1024 Op 10 . - CDS 2066978 - 2067298 350 ## ECL_00642 PRD domain-containing protein - Term 2067575 - 2067607 6.1 1939 1025 Op 1 2/0.587 - CDS 2067634 - 2068020 538 ## COG3783 Soluble cytochrome b562 1940 1025 Op 2 . - CDS 2068063 - 2069415 1779 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 2069595 - 2069654 2.8 + Prom 2069432 - 2069491 6.3 1941 1026 Tu 1 . + CDS 2069511 - 2070062 787 ## COG3028 Uncharacterized protein conserved in bacteria + Term 2070114 - 2070160 3.8 - Term 2070105 - 2070144 8.5 1942 1027 Tu 1 . - CDS 2070151 - 2071524 1688 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 2071673 - 2071732 5.4 + Prom 2071585 - 2071644 3.3 1943 1028 Tu 1 . + CDS 2071704 - 2072702 1237 ## COG0158 Fructose-1,6-bisphosphatase + Term 2072713 - 2072745 5.0 - Term 2072699 - 2072732 5.2 1944 1029 Op 1 . - CDS 2072742 - 2074310 1772 ## COG0840 Methyl-accepting chemotaxis protein - Prom 2074337 - 2074396 3.9 1945 1029 Op 2 11/0.017 - CDS 2074404 - 2075381 1400 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1946 1029 Op 3 21/0.000 - CDS 2075392 - 2076414 1262 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1947 1029 Op 4 16/0.000 - CDS 2076428 - 2077930 1826 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 2077954 - 2078013 75.1 1948 1030 Tu 1 . - CDS 2078015 - 2078968 1101 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 2079077 - 2079136 5.1 1949 1031 Tu 1 . + CDS 2079278 - 2079808 799 ## COG0221 Inorganic pyrophosphatase + Term 2079828 - 2079856 1.3 - Term 2079904 - 2079945 12.7 1950 1032 Op 1 6/0.121 - CDS 2079950 - 2080294 219 ## COG2105 Uncharacterized conserved protein 1951 1032 Op 2 16/0.000 - CDS 2080297 - 2084073 4247 ## COG2911 Uncharacterized protein conserved in bacteria 1952 1032 Op 3 . - CDS 2084070 - 2085767 1969 ## COG0729 Outer membrane protein - Prom 2085956 - 2086015 2.5 + Prom 2085915 - 2085974 2.4 1953 1033 Tu 1 . + CDS 2086094 - 2086669 648 ## COG0225 Peptide methionine sulfoxide reductase - Term 2086517 - 2086559 4.2 1954 1034 Tu 1 . - CDS 2086670 - 2087728 784 ## COG1609 Transcriptional regulators - Prom 2087777 - 2087836 5.2 + Prom 2087754 - 2087813 4.7 1955 1035 Op 1 9/0.034 + CDS 2087921 - 2089072 1432 ## COG0673 Predicted dehydrogenases and related proteins 1956 1035 Op 2 9/0.034 + CDS 2089088 - 2090266 1141 ## COG0673 Predicted dehydrogenases and related proteins 1957 1035 Op 3 9/0.034 + CDS 2090269 - 2091336 1251 ## COG0673 Predicted dehydrogenases and related proteins 1958 1035 Op 4 . + CDS 2091346 - 2092368 805 ## COG0673 Predicted dehydrogenases and related proteins 1959 1035 Op 5 . + CDS 2092438 - 2093982 1546 ## COG2211 Na+/melibiose symporter and related transporters + Term 2093991 - 2094031 4.0 + Prom 2094019 - 2094078 2.8 1960 1036 Tu 1 . + CDS 2094177 - 2095514 1767 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 2095541 - 2095571 5.0 - Term 2095529 - 2095559 5.0 1961 1037 Tu 1 . - CDS 2095591 - 2095797 237 ## SG4251 hypothetical protein - Prom 2095925 - 2095984 4.8 + Prom 2096017 - 2096076 2.5 1962 1038 Tu 1 . + CDS 2096122 - 2096679 674 ## COG3054 Predicted transcriptional regulator 1963 1039 Tu 1 . - CDS 2096673 - 2097413 987 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - Prom 2097456 - 2097515 3.7 + Prom 2097361 - 2097420 3.7 1964 1040 Tu 1 . + CDS 2097604 - 2099547 2580 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 2099599 - 2099638 5.2 1965 1041 Tu 1 . - CDS 2099629 - 2100015 485 ## COG1733 Predicted transcriptional regulators - Prom 2100045 - 2100104 1.6 + Prom 2099966 - 2100025 1.9 1966 1042 Op 1 1/0.716 + CDS 2100100 - 2100948 1150 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 1967 1042 Op 2 3/0.483 + CDS 2101030 - 2101854 848 ## COG2207 AraC-type DNA-binding domain-containing proteins 1968 1042 Op 3 . + CDS 2101918 - 2102895 1069 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 2102924 - 2102972 -0.8 1969 1043 Tu 1 . - CDS 2102975 - 2104624 1965 ## COG0840 Methyl-accepting chemotaxis protein - Prom 2104774 - 2104833 4.2 + Prom 2104601 - 2104660 5.6 1970 1044 Tu 1 . + CDS 2104870 - 2105532 717 ## COG2846 Regulator of cell morphogenesis and NO signaling - Term 2105525 - 2105563 0.4 1971 1045 Tu 1 . - CDS 2105619 - 2107028 1907 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 2107223 - 2107282 4.5 1972 1046 Tu 1 . - CDS 2107344 - 2107964 798 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 2107992 - 2108051 3.7 + Prom 2108097 - 2108156 3.2 1973 1047 Tu 1 . + CDS 2108196 - 2108834 682 ## COG3061 Cell envelope opacity-associated protein A + Term 2108843 - 2108883 5.4 - Term 2108625 - 2108669 1.9 1974 1048 Tu 1 . - CDS 2108881 - 2109810 1074 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 2109837 - 2109896 5.3 - Term 2109901 - 2109943 9.1 1975 1049 Op 1 27/0.000 - CDS 2109963 - 2110412 715 ## PROTEIN SUPPORTED gi|146310039|ref|YP_001175113.1| 50S ribosomal protein L9 1976 1049 Op 2 10/0.021 - CDS 2110454 - 2110681 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 1977 1049 Op 3 10/0.021 - CDS 2110686 - 2111000 70 ## COG2965 Primosomal replication protein N 1978 1049 Op 4 . - CDS 2111007 - 2111402 670 ## PROTEIN SUPPORTED gi|228578711|ref|YP_002847056.1| 30S ribosomal protein S6 - Prom 2111495 - 2111554 4.8 + Prom 2111538 - 2111597 4.1 1979 1050 Tu 1 . + CDS 2111745 - 2112020 172 ## ECL_00593 hypothetical protein + Term 2112074 - 2112102 1.3 - Term 2112060 - 2112090 1.7 1980 1051 Op 1 8/0.053 - CDS 2112154 - 2112840 797 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1981 1051 Op 2 9/0.034 - CDS 2112833 - 2113693 1100 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 1982 1051 Op 3 8/0.053 - CDS 2113703 - 2114353 976 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 1983 1051 Op 4 13/0.011 - CDS 2114366 - 2114833 704 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 1984 1051 Op 5 11/0.017 - CDS 2114843 - 2115148 366 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 1985 1051 Op 6 . - CDS 2115161 - 2116561 1686 ## COG3037 Uncharacterized protein conserved in bacteria - Prom 2116751 - 2116810 4.8 + Prom 2116726 - 2116785 7.0 1986 1052 Tu 1 . + CDS 2116921 - 2117985 1246 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 2117997 - 2118036 8.7 + Prom 2118012 - 2118071 5.0 1987 1053 Tu 1 . + CDS 2118096 - 2118851 842 ## COG1349 Transcriptional regulators of sugar metabolism - Term 2118781 - 2118834 -0.6 1988 1054 Tu 1 . - CDS 2118848 - 2119570 733 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 2119636 - 2119695 1.9 + Prom 2119551 - 2119610 3.2 1989 1055 Tu 1 . + CDS 2119735 - 2120037 225 ## Ent638_0368 putative biofilm stress and motility protein A + Prom 2120052 - 2120111 1.9 1990 1056 Tu 1 . + CDS 2120186 - 2120461 228 ## ECL_00582 hypothetical protein + Term 2120469 - 2120513 3.0 + Prom 2120503 - 2120562 7.5 1991 1057 Tu 1 . + CDS 2120632 - 2122563 2040 ## COG0840 Methyl-accepting chemotaxis protein + Term 2122764 - 2122809 1.1 - Term 2122483 - 2122537 0.9 1992 1058 Tu 1 . - CDS 2122560 - 2124182 1370 ## COG1960 Acyl-CoA dehydrogenases - Prom 2124301 - 2124360 3.2 + Prom 2124294 - 2124353 4.1 1993 1059 Tu 1 . + CDS 2124378 - 2125652 1556 ## COG0477 Permeases of the major facilitator superfamily 1994 1060 Tu 1 7/0.083 - CDS 2125744 - 2126475 458 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Term 2126486 - 2126525 2.2 1995 1061 Op 1 2/0.587 - CDS 2126539 - 2128980 1245 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 1996 1061 Op 2 5/0.231 - CDS 2129019 - 2129321 226 ## COG1959 Predicted transcriptional regulator - Prom 2129494 - 2129553 3.3 - Term 2129459 - 2129483 -1.0 1997 1062 Tu 1 . - CDS 2129638 - 2130936 1533 ## COG0104 Adenylosuccinate synthase - Prom 2130962 - 2131021 5.2 - Term 2130983 - 2131022 -0.6 1998 1063 Tu 1 11/0.017 - CDS 2131041 - 2131238 242 ## COG3242 Uncharacterized protein conserved in bacteria - Term 2131249 - 2131284 8.1 1999 1064 Op 1 21/0.000 - CDS 2131310 - 2132314 1453 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 2000 1064 Op 2 8/0.053 - CDS 2132317 - 2133576 1485 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 2001 1064 Op 3 16/0.000 - CDS 2133633 - 2134913 705 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Term 2134922 - 2134968 9.2 2002 1064 Op 4 15/0.006 - CDS 2134988 - 2135299 290 ## COG1923 Uncharacterized host factor I protein 2003 1064 Op 5 12/0.013 - CDS 2135385 - 2136290 550 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 2004 1064 Op 6 10/0.021 - CDS 2136328 - 2138172 1607 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 2005 1064 Op 7 13/0.011 - CDS 2138182 - 2139522 1349 ## COG0860 N-acetylmuramoyl-L-alanine amidase 2006 1064 Op 8 6/0.121 - CDS 2139539 - 2140000 478 ## COG0802 Predicted ATPase or kinase 2007 1064 Op 9 . - CDS 2139993 - 2141516 1083 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 - Prom 2141545 - 2141604 3.2 + Prom 2141435 - 2141494 4.1 2008 1065 Tu 1 . + CDS 2141515 - 2142654 1018 ## COG1600 Uncharacterized Fe-S protein + Term 2142823 - 2142865 2.1 - TRNA 2143292 - 2143367 93.7 # Gly GCC 0 0 2009 1066 Tu 1 . - CDS 2143564 - 2144109 814 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 2144139 - 2144198 2.5 + Prom 2144102 - 2144161 4.4 2010 1067 Op 1 2/0.587 + CDS 2144193 - 2145269 946 ## COG1162 Predicted GTPases 2011 1067 Op 2 5/0.231 + CDS 2145325 - 2146335 1147 ## COG0688 Phosphatidylserine decarboxylase 2012 1067 Op 3 . + CDS 2146379 - 2149678 3421 ## COG3264 Small-conductance mechanosensitive channel 2013 1068 Tu 1 . - CDS 2149715 - 2151193 1782 ## COG0531 Amino acid transporters - Prom 2151288 - 2151347 2.9 2014 1069 Tu 1 . - CDS 2151393 - 2152370 1442 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) - Prom 2152492 - 2152551 4.3 + Prom 2152519 - 2152578 5.8 2015 1070 Op 1 36/0.000 + CDS 2152804 - 2154471 1913 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 2016 1070 Op 2 10/0.021 + CDS 2154464 - 2155198 968 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 2017 1070 Op 3 10/0.021 + CDS 2155209 - 2155604 534 ## COG3029 Fumarate reductase subunit C 2018 1070 Op 4 . + CDS 2155615 - 2155974 557 ## COG3080 Fumarate reductase subunit D + Term 2155976 - 2156020 7.1 - Term 2155971 - 2156000 3.5 2019 1071 Tu 1 . - CDS 2156004 - 2156879 714 ## COG0583 Transcriptional regulator - Prom 2156909 - 2156968 4.6 + Prom 2156867 - 2156926 2.0 2020 1072 Op 1 6/0.121 + CDS 2157012 - 2157587 589 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 2021 1072 Op 2 3/0.483 + CDS 2157591 - 2158157 621 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Prom 2158187 - 2158246 1.9 2022 1073 Tu 1 . + CDS 2158266 - 2158796 501 ## COG3040 Bacterial lipocalin 2023 1074 Tu 1 . - CDS 2158793 - 2159110 340 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 2159195 - 2159254 2.4 + Prom 2159181 - 2159240 7.1 2024 1075 Tu 1 . + CDS 2159373 - 2159972 365 ## COG2771 DNA-binding HTH domain-containing proteins - Term 2159957 - 2160001 6.7 2025 1076 Tu 1 . - CDS 2160009 - 2160155 109 ## COG5510 Predicted small secreted protein - Prom 2160195 - 2160254 3.9 2026 1077 Op 1 . - CDS 2160264 - 2160395 76 ## gi|295098307|emb|CBK87397.1| Predicted small secreted protein - Term 2160403 - 2160435 5.0 2027 1077 Op 2 . - CDS 2160453 - 2161019 714 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 2161062 - 2161121 3.8 + Prom 2160957 - 2161016 3.2 2028 1078 Tu 1 . + CDS 2161060 - 2162088 969 ## COG1509 Lysine 2,3-aminomutase 2029 1079 Tu 1 . - CDS 2162155 - 2162508 385 ## ECL_00545 putative outer membrane lipoprotein - Prom 2162643 - 2162702 4.6 + Prom 2162513 - 2162572 5.1 2030 1080 Op 1 3/0.483 + CDS 2162741 - 2163388 548 ## COG3314 Uncharacterized protein conserved in bacteria 2031 1080 Op 2 . + CDS 2163385 - 2163846 412 ## COG0700 Uncharacterized membrane protein 2032 1080 Op 3 . + CDS 2163857 - 2165020 1073 ## CKO_00306 isoaspartyl dipeptidase + Term 2165035 - 2165068 6.8 - Term 2165017 - 2165063 10.0 2033 1081 Op 1 41/0.000 - CDS 2165086 - 2166732 2359 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 2034 1081 Op 2 . - CDS 2166772 - 2167065 305 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 2167152 - 2167211 4.4 + Prom 2167042 - 2167101 3.0 2035 1082 Tu 1 . + CDS 2167244 - 2168491 1238 ## COG0531 Amino acid transporters - Term 2168466 - 2168510 5.6 2036 1083 Tu 1 . - CDS 2168515 - 2168985 452 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 2169150 - 2169209 4.1 + Prom 2169218 - 2169277 5.8 2037 1084 Tu 1 . + CDS 2169315 - 2170751 1834 ## COG1027 Aspartate ammonia-lyase + Term 2170771 - 2170812 9.7 + Prom 2170787 - 2170846 2.1 2038 1085 Tu 1 . + CDS 2170868 - 2172169 1778 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 2172200 - 2172230 5.7 + Prom 2172172 - 2172231 2.2 2039 1086 Op 1 7/0.083 + CDS 2172283 - 2172606 128 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations 2040 1086 Op 2 3/0.483 + CDS 2172582 - 2174291 1647 ## COG4232 Thiol:disulfide interchange protein 2041 1086 Op 3 . + CDS 2174341 - 2174916 652 ## COG1309 Transcriptional regulator - Term 2174697 - 2174734 -0.6 2042 1087 Op 1 2/0.587 - CDS 2174913 - 2175503 441 ## COG1280 Putative threonine efflux protein 2043 1087 Op 2 . - CDS 2175541 - 2176386 551 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 2176573 - 2176632 79.3 + TRNA 2176556 - 2176631 84.1 # Phe GAA 0 0 + Prom 2176558 - 2176617 80.2 2044 1088 Tu 1 . + CDS 2176652 - 2177362 406 ## COG3647 Predicted membrane protein + Prom 2180777 - 2180836 80.4 2045 1089 Tu 1 . + CDS 2181036 - 2181989 722 ## COG2215 ABC-type uncharacterized transport system, permease component + Term 2181990 - 2182036 4.4 - Term 2181986 - 2182014 2.1 2046 1090 Tu 1 . - CDS 2182022 - 2183524 1932 ## COG0477 Permeases of the major facilitator superfamily + Prom 2183875 - 2183934 5.6 2047 1091 Tu 1 . + CDS 2184173 - 2185165 899 ## ECL_00367 2-keto-3-deoxygluconate permease 2048 1092 Op 1 . - CDS 2185199 - 2186077 724 ## Ent638_0313 hypothetical protein 2049 1092 Op 2 . - CDS 2186074 - 2188428 1604 ## COG0699 Predicted GTPases (dynamin-related) - Prom 2188478 - 2188537 5.5 + Prom 2188892 - 2188951 5.7 2050 1093 Op 1 4/0.364 + CDS 2189019 - 2189354 489 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 2051 1093 Op 2 3/0.483 + CDS 2189435 - 2189866 450 ## COG2764 Uncharacterized protein conserved in bacteria + Term 2189900 - 2189943 -0.6 + Prom 2189933 - 2189992 2.9 2052 1094 Op 1 15/0.006 + CDS 2190040 - 2190828 251 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 2053 1094 Op 2 8/0.053 + CDS 2190852 - 2191868 1406 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component + Prom 2191928 - 2191987 74.5 2054 1095 Op 1 3/0.483 + CDS 2192120 - 2192899 1088 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 2055 1095 Op 2 5/0.231 + CDS 2192920 - 2193645 709 ## COG2188 Transcriptional regulators 2056 1095 Op 3 9/0.034 + CDS 2193646 - 2194098 473 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 2057 1095 Op 4 8/0.053 + CDS 2194095 - 2194679 660 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 2058 1095 Op 5 8/0.053 + CDS 2194679 - 2195743 1290 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 2059 1095 Op 6 7/0.083 + CDS 2195736 - 2196581 1203 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 2060 1095 Op 7 7/0.083 + CDS 2196578 - 2197333 243 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 2061 1096 Op 1 6/0.121 + CDS 2197440 - 2198120 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2062 1096 Op 2 7/0.083 + CDS 2198117 - 2199253 1171 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 2063 1096 Op 3 3/0.483 + CDS 2199253 - 2199801 498 ## COG3709 Uncharacterized component of phosphonate metabolism 2064 1096 Op 4 3/0.483 + CDS 2199794 - 2200228 457 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 2065 1096 Op 5 . + CDS 2200238 - 2200996 766 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I + Term 2201129 - 2201165 -0.9 - Term 2200927 - 2200965 -0.8 2066 1097 Op 1 . - CDS 2201055 - 2201375 263 ## Ent638_0292 hypothetical protein 2067 1097 Op 2 . - CDS 2201445 - 2203724 2340 ## COG0642 Signal transduction histidine kinase - Prom 2203756 - 2203815 3.0 2068 1098 Op 1 5/0.231 + CDS 2203850 - 2205370 190 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2069 1098 Op 2 5/0.231 + CDS 2205367 - 2206362 1586 ## COG4158 Predicted ABC-type sugar transport system, permease component 2070 1098 Op 3 3/0.483 + CDS 2206391 - 2207332 1327 ## COG1879 ABC-type sugar transport system, periplasmic component + Prom 2207368 - 2207427 1.6 2071 1099 Op 1 4/0.364 + CDS 2207447 - 2208133 815 ## COG3822 ABC-type sugar transport system, auxiliary component 2072 1099 Op 2 4/0.364 + CDS 2208144 - 2209004 1022 ## COG0191 Fructose/tagatose bisphosphate aldolase 2073 1099 Op 3 . + CDS 2209004 - 2210023 1089 ## COG0524 Sugar kinases, ribokinase family 2074 1100 Tu 1 . - CDS 2210005 - 2210736 705 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2075 1101 Op 1 5/0.231 + CDS 2210993 - 2211412 551 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 2076 1101 Op 2 4/0.364 + CDS 2211461 - 2213140 1929 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 2213168 - 2213236 31.2 2077 1102 Tu 1 . + CDS 2213814 - 2214488 638 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Term 2214481 - 2214534 7.4 2078 1103 Tu 1 . - CDS 2214540 - 2215853 1973 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 2216072 - 2216131 5.7 + Prom 2216031 - 2216090 5.8 2079 1104 Tu 1 . + CDS 2216276 - 2218234 2492 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases + Prom 2218266 - 2218325 49.9 2080 1105 Op 1 10/0.021 + CDS 2218517 - 2218735 308 ## COG3162 Predicted membrane protein 2081 1105 Op 2 . + CDS 2218732 - 2220381 2530 ## COG4147 Predicted symporter - Term 2220309 - 2220352 -0.9 2082 1106 Op 1 23/0.000 - CDS 2220415 - 2221104 939 ## COG1346 Putative effector of murein hydrolase 2083 1106 Op 2 . - CDS 2221097 - 2221507 637 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 2221532 - 2221591 3.9 + Prom 2221495 - 2221554 1.6 2084 1107 Tu 1 . + CDS 2221610 - 2222497 1043 ## COG0583 Transcriptional regulator 2085 1108 Tu 1 . - CDS 2222580 - 2224199 2326 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 2224278 - 2224337 4.9 - Term 2224322 - 2224363 9.5 2086 1109 Op 1 . - CDS 2224379 - 2225728 1919 ## COG2252 Permeases - Prom 2225856 - 2225915 3.5 - Term 2225793 - 2225852 -0.6 2087 1109 Op 2 . - CDS 2226026 - 2226697 671 ## COG0625 Glutathione S-transferase - Prom 2226719 - 2226778 4.8 - Term 2226915 - 2226958 10.4 2088 1110 Tu 1 . - CDS 2227054 - 2227512 538 ## COG0789 Predicted transcriptional regulators - Prom 2227537 - 2227596 5.2 + Prom 2227499 - 2227558 3.4 2089 1111 Tu 1 . + CDS 2227611 - 2227937 308 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 2227743 - 2227781 -0.8 2090 1112 Tu 1 . - CDS 2227944 - 2229485 993 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Prom 2229710 - 2229769 3.0 - Term 2229780 - 2229808 -0.1 2091 1113 Tu 1 . - CDS 2229848 - 2230108 56 ## 2092 1114 Tu 1 . + CDS 2230169 - 2230450 239 ## ECL_00318 putative inner membrane protein + Term 2230462 - 2230507 9.2 - Term 2230457 - 2230486 2.1 2093 1115 Tu 1 . - CDS 2230512 - 2231042 640 ## COG0629 Single-stranded DNA-binding protein - Prom 2231065 - 2231124 3.1 + Prom 2231172 - 2231231 5.7 2094 1116 Tu 1 . + CDS 2231294 - 2234116 3822 ## COG0178 Excinuclease ATPase subunit + Term 2234129 - 2234179 0.5 2095 1117 Op 1 4/0.364 - CDS 2234120 - 2234473 327 ## COG2315 Uncharacterized protein conserved in bacteria 2096 1117 Op 2 4/0.364 - CDS 2234476 - 2234892 323 ## COG0432 Uncharacterized conserved protein - Prom 2234939 - 2234998 3.0 2097 1118 Tu 1 . - CDS 2235005 - 2235718 680 ## COG3700 Acid phosphatase (class B) - Prom 2235776 - 2235835 4.5 2098 1119 Tu 1 . - CDS 2235935 - 2237080 1447 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 2237136 - 2237195 2.3 - Term 2237199 - 2237231 6.3 2099 1120 Op 1 9/0.034 - CDS 2237238 - 2238317 1155 ## COG0787 Alanine racemase 2100 1120 Op 2 . - CDS 2238334 - 2239746 1592 ## COG0305 Replicative DNA helicase - Prom 2239776 - 2239835 4.8 + Prom 2239697 - 2239756 1.6 2101 1121 Tu 1 . + CDS 2239807 - 2240790 1136 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 2240801 - 2240842 7.0 - Term 2240787 - 2240830 7.0 2102 1122 Tu 1 . - CDS 2240976 - 2241218 323 ## EC55989_4543 phage shock protein G - Prom 2241267 - 2241326 2.1 - Term 2241290 - 2241325 7.4 2103 1123 Tu 1 . - CDS 2241355 - 2242350 1216 ## COG0042 tRNA-dihydrouridine synthase - Prom 2242400 - 2242459 5.8 + Prom 2242397 - 2242456 3.6 2104 1124 Op 1 . + CDS 2242498 - 2242761 116 ## Glov_0060 hypothetical protein 2105 1124 Op 2 . + CDS 2242758 - 2243093 194 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters + Term 2243099 - 2243130 2.4 - Term 2243083 - 2243122 7.3 2106 1125 Tu 1 . - CDS 2243126 - 2244412 1403 ## ECL_00306 conjugative transfer protein - Prom 2244534 - 2244593 3.3 2107 1126 Tu 1 . - CDS 2244605 - 2245093 388 ## COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 2245158 - 2245217 1.8 2108 1127 Tu 1 . + CDS 2245211 - 2245723 535 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Term 2245725 - 2245753 3.0 2109 1128 Tu 1 . - CDS 2245771 - 2245980 387 ## COG3237 Uncharacterized protein conserved in bacteria - Prom 2246039 - 2246098 1.8 2110 1129 Op 1 1/0.716 - CDS 2246100 - 2247437 1151 ## COG0534 Na+-driven multidrug efflux pump - Term 2247451 - 2247489 6.9 2111 1129 Op 2 5/0.231 - CDS 2247501 - 2248109 796 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 2248137 - 2248196 7.2 2112 1130 Tu 1 . - CDS 2248218 - 2248586 301 ## COG0818 Diacylglycerol kinase - Prom 2248770 - 2248829 4.0 + Prom 2248527 - 2248586 4.3 2113 1131 Tu 1 . + CDS 2248741 - 2251161 2875 ## COG2937 Glycerol-3-phosphate O-acyltransferase + Term 2251221 - 2251260 5.2 - Term 2251158 - 2251197 -1.0 2114 1132 Op 1 6/0.121 - CDS 2251253 - 2252122 1190 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 2115 1132 Op 2 . - CDS 2252135 - 2252632 464 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) - Prom 2252695 - 2252754 3.2 - Term 2252737 - 2252768 3.2 2116 1133 Tu 1 . - CDS 2252805 - 2253743 916 ## ECL_00294 maltose regulon periplasmic protein - Term 2253800 - 2253825 -0.5 2117 1134 Op 1 5/0.231 - CDS 2253858 - 2255165 1566 ## COG4580 Maltoporin (phage lambda and maltose receptor) 2118 1134 Op 2 . - CDS 2255211 - 2256320 1331 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 2256537 - 2256596 2.4 + Prom 2256501 - 2256560 2.0 2119 1135 Op 1 19/0.000 + CDS 2256691 - 2257881 1575 ## COG2182 Maltose-binding periplasmic proteins/domains 2120 1135 Op 2 20/0.000 + CDS 2258002 - 2259546 2172 ## COG1175 ABC-type sugar transport systems, permease components 2121 1135 Op 3 . + CDS 2259561 - 2260451 1369 ## COG3833 ABC-type maltose transport systems, permease component + Term 2260524 - 2260554 3.0 - Term 2260273 - 2260311 -0.7 2122 1136 Tu 1 . - CDS 2260548 - 2260958 613 ## COG3223 Predicted membrane protein - Prom 2261013 - 2261072 2.6 - Term 2261080 - 2261134 2.1 2123 1137 Op 1 . - CDS 2261138 - 2263234 2906 ## ECL_00281 putative lipoprotein 2124 1137 Op 2 . - CDS 2263234 - 2263971 724 ## ECL_00280 hypothetical protein 2125 1137 Op 3 . - CDS 2263968 - 2264606 661 ## ECL_00279 putative lipoprotein - Term 2264621 - 2264648 0.1 2126 1137 Op 4 . - CDS 2264670 - 2264912 138 ## - Prom 2265063 - 2265122 7.4 - Term 2265225 - 2265266 6.2 2127 1138 Tu 1 . - CDS 2265279 - 2266928 2428 ## COG0166 Glucose-6-phosphate isomerase - Prom 2266961 - 2267020 7.7 + Prom 2267121 - 2267180 5.2 2128 1139 Op 1 . + CDS 2267303 - 2268652 1882 ## COG0527 Aspartokinases + Term 2268684 - 2268713 1.1 2129 1139 Op 2 . + CDS 2268746 - 2269690 1382 ## COG0385 Predicted Na+-dependent transporter 2130 1139 Op 3 . + CDS 2269741 - 2270013 314 ## ECUMN_4556 hypothetical protein - Term 2269760 - 2269819 2.7 2131 1140 Op 1 . - CDS 2270014 - 2270886 1113 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 2132 1140 Op 2 . - CDS 2270940 - 2271278 332 ## COG5606 Uncharacterized conserved small protein - Term 2271664 - 2271709 8.4 2133 1141 Op 1 . - CDS 2271774 - 2273405 2101 ## COG1283 Na+/phosphate symporter - Prom 2273542 - 2273601 2.1 - Term 2273565 - 2273600 6.1 2134 1141 Op 2 . - CDS 2273623 - 2277240 4649 ## COG1410 Methionine synthase I, cobalamin-binding domain - Prom 2277469 - 2277528 5.7 + Prom 2277345 - 2277404 3.5 2135 1142 Tu 1 . + CDS 2277500 - 2278327 991 ## COG1414 Transcriptional regulator + Term 2278362 - 2278396 -0.5 2136 1143 Tu 1 . - CDS 2278350 - 2280101 1539 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase - Prom 2280183 - 2280242 80.4 - Term 2280149 - 2280215 30.0 2137 1144 Op 1 7/0.083 - CDS 2280279 - 2281583 1617 ## COG2224 Isocitrate lyase 2138 1144 Op 2 5/0.231 - CDS 2281615 - 2283216 1927 ## COG2225 Malate synthase - Prom 2283411 - 2283470 6.4 - Term 2283414 - 2283440 -1.0 2139 1145 Tu 1 . - CDS 2283487 - 2284416 995 ## COG1897 Homoserine trans-succinylase + Prom 2287954 - 2288013 3.7 2140 1146 Op 1 17/0.000 + CDS 2288109 - 2289698 1848 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 2141 1146 Op 2 . + CDS 2289714 - 2291006 1776 ## COG0151 Phosphoribosylamine-glycine ligase 2142 1147 Op 1 . - CDS 2291074 - 2291772 399 ## ECL_00262 hypothetical protein 2143 1147 Op 2 6/0.121 - CDS 2291778 - 2292050 382 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 2292155 - 2292214 1.9 - Term 2292092 - 2292126 -0.7 2144 1148 Op 1 4/0.364 - CDS 2292237 - 2292827 842 ## COG3068 Uncharacterized protein conserved in bacteria 2145 1148 Op 2 4/0.364 - CDS 2292869 - 2293540 654 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 2146 1148 Op 3 5/0.231 - CDS 2293550 - 2294614 1416 ## COG0407 Uroporphyrinogen-III decarboxylase 2147 1148 Op 4 . - CDS 2294653 - 2295426 842 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding - Prom 2295490 - 2295549 4.5 + Prom 2295428 - 2295487 3.4 2148 1149 Tu 1 . + CDS 2295522 - 2296019 599 ## COG3160 Regulator of sigma D + Term 2296056 - 2296084 1.0 2149 1150 Op 1 8/0.053 + CDS 2296263 - 2298158 2347 ## COG0422 Thiamine biosynthesis protein ThiC 2150 1150 Op 2 3/0.483 + CDS 2298158 - 2298799 746 ## COG0352 Thiamine monophosphate synthase 2151 1150 Op 3 5/0.231 + CDS 2298786 - 2299541 895 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 2152 1150 Op 4 16/0.000 + CDS 2299525 - 2299725 259 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 2153 1150 Op 5 5/0.231 + CDS 2299727 - 2300494 831 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 2154 1150 Op 6 . + CDS 2300494 - 2301627 1280 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes + Term 2301679 - 2301716 4.3 + Prom 2301826 - 2301885 4.9 2155 1151 Tu 1 . + CDS 2301961 - 2303502 1266 ## COG2199 FOG: GGDEF domain + Prom 2303505 - 2303564 6.1 2156 1152 Op 1 8/0.053 + CDS 2303683 - 2303991 334 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 2157 1152 Op 2 . + CDS 2303991 - 2304308 364 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 2304322 - 2304363 8.2 - Term 2304318 - 2304343 -0.5 2158 1153 Op 1 58/0.000 - CDS 2304367 - 2308590 4513 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 2159 1153 Op 2 28/0.000 - CDS 2308667 - 2312695 4075 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 2312848 - 2312907 2.4 - Term 2312956 - 2313004 6.3 2160 1153 Op 3 47/0.000 - CDS 2313015 - 2313380 558 ## PROTEIN SUPPORTED gi|16762301|ref|NP_457918.1| 50S ribosomal protein L7/L12 2161 1153 Op 4 43/0.000 - CDS 2313447 - 2313944 794 ## PROTEIN SUPPORTED gi|16762302|ref|NP_457919.1| 50S ribosomal protein L10 - Prom 2314154 - 2314213 2.7 2162 1153 Op 5 55/0.000 - CDS 2314234 - 2314938 1138 ## PROTEIN SUPPORTED gi|206575922|ref|YP_002241079.1| ribosomal protein L1 2163 1153 Op 6 45/0.000 - CDS 2314942 - 2315370 702 ## PROTEIN SUPPORTED gi|228577459|ref|YP_002845810.1| 50S ribosomal protein L11 - Prom 2315461 - 2315520 6.0 - Term 2315443 - 2315493 10.5 2164 1154 Op 1 46/0.000 - CDS 2315527 - 2316072 572 ## COG0250 Transcription antiterminator 2165 1154 Op 2 . - CDS 2316074 - 2316457 417 ## COG0690 Preprotein translocase subunit SecE - TRNA 2317569 - 2317644 88.7 # Thr GGT 0 0 - TRNA 2317651 - 2317725 64.8 # Gly TCC 0 0 - TRNA 2317842 - 2317926 67.6 # Tyr GTA 0 0 - TRNA 2317935 - 2318010 91.8 # Thr TGT 0 0 + Prom 2318069 - 2318128 3.9 2166 1155 Tu 1 . + CDS 2318322 - 2319278 1234 ## COG1072 Panthothenate kinase + Term 2319288 - 2319330 3.5 - Term 2319285 - 2319311 -0.7 2167 1156 Op 1 44/0.000 - CDS 2319320 - 2320333 802 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 2168 1156 Op 2 44/0.000 - CDS 2320330 - 2321313 1109 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 2169 1156 Op 3 49/0.000 - CDS 2321324 - 2322226 1339 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 2170 1156 Op 4 38/0.000 - CDS 2322236 - 2323255 343 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Prom 2323307 - 2323366 2.9 - Term 2323303 - 2323347 4.0 2171 1156 Op 5 . - CDS 2323433 - 2325040 2192 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 2325093 - 2325152 4.0 - Term 2325488 - 2325552 29.8 2172 1157 Tu 1 . - CDS 2325757 - 2325999 173 ## ESA_04231 hypothetical protein - Prom 2326137 - 2326196 4.1 2173 1158 Tu 1 . + CDS 2326186 - 2326551 67 ## EC55989_3929 Tn7-like transposase TnsA + Term 2326565 - 2326609 -0.7 + Prom 2327570 - 2327629 3.3 2174 1159 Tu 1 . + CDS 2327681 - 2328661 -82 ## EC55989_3928 Tn7-like transposition protein TnsB + Term 2328740 - 2328796 -0.2 + Prom 2329151 - 2329210 4.3 2175 1160 Tu 1 . + CDS 2329435 - 2330109 41 ## EC55989_3927 Tn7-like transposition protein TnsC + Term 2330202 - 2330241 3.0 + Prom 2331017 - 2331076 6.9 2176 1161 Tu 1 . + CDS 2331215 - 2331706 -59 ## ECL_04905 Tn7-like transposition protein TnsD + Term 2331953 - 2332005 5.3 + Prom 2332255 - 2332314 4.5 2177 1162 Tu 1 . + CDS 2332336 - 2332644 73 ## EC55989_3923 hypothetical protein 2178 1163 Tu 1 . + CDS 2333860 - 2335686 1000 ## EC55989_3921 hypothetical protein + Term 2335819 - 2335862 -0.7 - Term 2335784 - 2335817 -1.0 2179 1164 Tu 1 . - CDS 2335855 - 2336205 296 ## COG3544 Uncharacterized protein conserved in bacteria - Prom 2336275 - 2336334 1.9 - Term 2336248 - 2336278 3.0 2180 1165 Tu 1 . - CDS 2336353 - 2336784 282 ## EC55989_3919 silver-binding protein SilE - Prom 2336959 - 2337018 3.9 - Term 2336817 - 2336859 0.2 2181 1166 Op 1 40/0.000 - CDS 2337029 - 2338510 666 ## COG0642 Signal transduction histidine kinase 2182 1166 Op 2 . - CDS 2338503 - 2339183 405 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2339204 - 2339263 2.6 + Prom 2339105 - 2339164 2.7 2183 1167 Op 1 3/0.483 + CDS 2339373 - 2340758 490 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 2184 1167 Op 2 3/0.483 + CDS 2340786 - 2341139 339 ## COG5569 Uncharacterized conserved protein 2185 1168 Op 1 11/0.017 + CDS 2341253 - 2342545 983 ## COG0845 Membrane-fusion protein 2186 1168 Op 2 1/0.716 + CDS 2342556 - 2345702 3315 ## COG3696 Putative silver efflux pump + Term 2345707 - 2345746 5.2 2187 1168 Op 3 . + CDS 2345788 - 2346228 333 ## COG3019 Predicted metal-binding protein + Term 2346253 - 2346293 7.7 2188 1169 Tu 1 . - CDS 2346409 - 2346621 58 ## ESA_04244 hypothetical protein 2189 1170 Op 1 . + CDS 2346814 - 2348802 948 ## COG2217 Cation transport ATPase 2190 1170 Op 2 . + CDS 2348843 - 2349040 128 ## Sputcn32_0265 hypothetical protein + Term 2349050 - 2349082 6.1 2191 1171 Tu 1 . - CDS 2349074 - 2349811 200 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 2349842 - 2349901 3.0 2192 1172 Tu 1 . - CDS 2350100 - 2350549 102 ## EC55989_3907 conserved hypothetical protein; putative exported protein - Prom 2350720 - 2350779 3.8 + Prom 2350539 - 2350598 7.0 2193 1173 Op 1 4/0.364 + CDS 2350784 - 2352601 1382 ## COG2132 Putative multicopper oxidases 2194 1173 Op 2 1/0.716 + CDS 2352607 - 2353497 225 ## COG3667 Uncharacterized protein involved in copper resistance 2195 1173 Op 3 8/0.053 + CDS 2353537 - 2353917 218 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC 2196 1173 Op 4 . + CDS 2353922 - 2354851 543 ## COG1276 Putative copper export protein 2197 1173 Op 5 40/0.000 + CDS 2354906 - 2355586 499 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 2198 1173 Op 6 . + CDS 2355637 - 2356983 690 ## COG0642 Signal transduction histidine kinase + Prom 2357013 - 2357072 7.5 2199 1174 Tu 1 . + CDS 2357201 - 2357635 309 ## APECO1_O1R123 PcoE + Term 2357687 - 2357717 3.0 Predicted protein(s) >gi|333596726|gb|GL892086.1| GENE 1 2 - 1187 1154 395 aa, chain - ## HITS:1 COG:STM3588 KEGG:ns NR:ns ## COG: STM3588 COG2081 # Protein_GI_number: 16766874 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Salmonella typhimurium LT2 # 1 395 1 395 398 723 87.0 0 MERFDAVVIGAGAAGMFCAAMAGQAGRRVLLLDNGKKPGRKILMSGGGRCNFTNLYVEPA AYLSQNRHFCKSALARYTQWDFIELVGKYGIAWHEKTLGQLFCDDSAQQIVDMLVAECEK GGVVMRLRTEVLDVARDEQGYTLQLNGETVSADNLVIASGGLSMPGLGASPFGYKIAEQF GLKVLPTRAGLVPFTLHKPLLEQLQTLSGVSVPSVITAEDGTVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSVNLVPDCDLDAFLNEQRAAHPNQSLKNTLAMQLPKRLVECLQVLGQ IPDVALKQLNSREQETLVETLTNWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARNVP GLYFIGEVMDVTGWLGGYNFQWAWASAWACAQALA >gi|333596726|gb|GL892086.1| GENE 2 1416 - 2915 1671 499 aa, chain + ## HITS:1 COG:STM3589 KEGG:ns NR:ns ## COG: STM3589 COG0306 # Protein_GI_number: 16766875 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Salmonella typhimurium LT2 # 1 499 1 498 498 828 90.0 0 MLHLFAGLDLHTGLLLLLALVFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVF NFFGVLLGGLSVAYAIVHMLPTDLLLNVSSGHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVVDALNLPKVLGIFGSLIISPIVGLVVAGGLIFILRRY WSNTKKRARIHLTPAEREKKDGKKKPPFWTRIALIISAIGVAFSHGANDGQKGIGLVMLV LIGVAPAGFVVNMNASGYEITRTRDAVNNVETYFQQHPDLLKKATGVDQLIPSPDSGATT APGEFHCHPANAVNALERAKGMLADIESYDKLAVEQRGQLRRIMLCISDVTDKVAKLPEV NADDKRLLKKLKGDMLNTIEYAPIWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTY AQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMIVDGGGLQRKTVTNILMAWVFT LPASILLSGGLYWISLKLI >gi|333596726|gb|GL892086.1| GENE 3 2970 - 3251 351 93 aa, chain - ## HITS:1 COG:no KEGG:ECL_04912 NR:ns ## KEGG: ECL_04912 # Name: not_defined # Def: universal stress protein UspB # Organism: E.cloacae # Pathway: not_defined # 1 93 1 93 93 177 100.0 2e-43 MARYFSSLRALLVVLRGCDPLLYQYVDGGGFFTSHGQPSKQMRLVGYIYYQRYRDHHDEE FIRRCERLRRQFILTSALCGLVVVSMIALMIWH >gi|333596726|gb|GL892086.1| GENE 4 3589 - 4026 714 145 aa, chain + ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 266 97.0 9e-72 MAYKHILIAVDLSPESKVLVDKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISEETHHALSELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLM SSARQLINTVHVDMLIVPLRDEEDE >gi|333596726|gb|GL892086.1| GENE 5 4110 - 4763 774 217 aa, chain - ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 217 33 249 250 388 93.0 1e-108 MALVMTTAHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGSYLPDV VDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADPEIGPWLQERLQLIHA SSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLAPARQLAT KRVVVKRPDYAPPLADVATTNAVTTKGHRFDIYVPSP >gi|333596726|gb|GL892086.1| GENE 6 4867 - 6909 3058 680 aa, chain - ## HITS:1 COG:prlC KEGG:ns NR:ns ## COG: prlC COG0339 # Protein_GI_number: 16131370 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli K12 # 1 680 1 680 680 1308 94.0 0 MTNPLLTPFSLPPFSKILPEHVVPAVTQSLDNCRAAVESVVAQGAPYTWENLCQPLAEVD DVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYA ELNTAQKKSVDNALRDFELSGIGLPKEKQVRYGEIAARLSELGNQYSNNVLDATMGWTKL ITDESELAGMPESALAAAKAQAEAKEQEGFLLTLDIPSYLPVMTYCDNQALREEMYRAYS TRASDQGPNAGKWDNSPVMAEILALRHELAQLLGFDSYADKSLATKMAENPQQVLDFLTD LAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPEN KAVNGLFEVVKRIYGITAKERTDIDVWHPDVRFFELYDEKNELRGSFYLDLYARENKRGG AWMDDCVGQMRKADGTLQKPVAYLTCNFNRPVSGKPALFTHDEVITLFHEFGHGLHHMLT RIETAGVAGISGVPWDAVELPSQFMENWCWEPDALAFISGHYETGEPLPKELLDKMLAAK NYQAAMFILRQLEFGLFDFRLHAEFSPEQGAKILETLAEIKKQVAVIPGPTWGRFPHAFS HIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILTRGGSEEPMELFK RFRGREPQLDAMLEHYGIKG >gi|333596726|gb|GL892086.1| GENE 7 7087 - 7929 1007 280 aa, chain + ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 526 92.0 1e-149 MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLSGEHAERTGE YLEGIARIWQQDDLPAELEPYIGVVNHFNRNGQLRYYPGSPLIARQLLREQDSLQLTELH PSDFPLLRSEFQKDNRARVDKADGYQQLKAKLPPVSRRGLVLIDPPYEIKTDYQAVVTGI NEGYKRFATGTYALWYPVVLRAQIKRMIKDLEATGIRKILQIELAVRPDSDQRGMTASGM IVINPPWKLEAQMNNVLPWLHKTLVPAGTGHATVSWIVPE >gi|333596726|gb|GL892086.1| GENE 8 8000 - 9352 486 450 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 444 4 442 458 191 30 9e-47 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIR EAIHMYGPDYGFDTTINHFDWDKLIASRTAYIDRIHTSYDNVLGKNNVDVIRGFARFVDA KTIEVNGETITADHILIATGGRPSHPNIPGAEYGIDSDGFFELPALPERVAIVGAGYIAV ELAGVINGLGAQAHLFVRKHAPLRSFDPLIVDTLVEVMNTEGPTLHTNAVPKAVVKNADG SLTLELEDGRSQTVDCLIWAIGREPATDNFNLAATGVKTNEKGYIVVDKFQNTSVPGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAR EQYGDDQVKVYKSAFTAMYTAVTSHRQPCRMKLVCVGPDEKIVGIHGIGFGMDEILQGFA VALKMGATKKDFDNTVAIHPTAAEEFVTMR >gi|333596726|gb|GL892086.1| GENE 9 9530 - 9811 263 93 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2463 NR:ns ## KEGG: Kvar_2463 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 3 71 1 69 71 68 52.0 1e-10 MHVKITAKLMAKMHLVLALVWAILTIPTLLWWKNSILWVSLMSIYAIVISHLAAYSAAHA EKAASKAMDKSEGASQKANQTANSLSGDARQAH >gi|333596726|gb|GL892086.1| GENE 10 10052 - 11701 1934 549 aa, chain + ## HITS:1 COG:ECs4399 KEGG:ns NR:ns ## COG: ECs4399 COG1626 # Protein_GI_number: 15833653 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 972 87.0 0 MFNQKLQTAEDIEFEIAEELRYETDPCELKLDEMIEAEPEPEMIEGLPASDALTPADRYL ELFEHVQSSRLFADSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLARFVENHFWLPEDYS KEYVSDPGLSLKEHIDNLWPVLTREPQDHIPWSSLLALPQAYIVPGGRFSETYYWDSYFS MLGLAESGRNDLLKCMADNFAWLIERYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR GAKRYLEHLKMEYAFWMDGAESLLLNQAYRSAVRMPDGSLLNRYWDDRDTPRDESWIEDV ETARHSGRPPNEVYRDLRAGAASGWDYSSRWLRDPARLASIRTTQFIPIDLNAFLFKLES AIANISASKGDKETAELFRQKASDRRAAVNRYLWDEENGCYRDYDWRREALALFSAASIV PLYVGMATHEQAERLSDAVKARLLTPGGILATEYETGEQWDKPNGWAPLQWMAIQGFKQY GNDSLGDEIAWSWLHTVNHYYKTHHKLIEKYHIASSTPREGGGGEYPLQDGFGWTNGVVR RLIGLYGEP >gi|333596726|gb|GL892086.1| GENE 11 11794 - 13377 1462 527 aa, chain - ## HITS:1 COG:no KEGG:ECL_04919 NR:ns ## KEGG: ECL_04919 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 2 527 3 529 529 870 85.0 0 MISSSHHTREQFEHCLAAIRQASVEILLLLNVPVSEGKDPRWFLEQLDSARLGLGGWGAV ASKLNLNDAEMTAFTLQLRLLQQRVPQYESGQDVSENQLIAAMRFVTALEYLRLQQPLLT YDTGMVPEKESQLQAQKQVRAIELMIKGLIQQAWPDPVRLNNHLKTLFNAERVRRWLKNG EINDVLSGMLFSELAQLLVDKKEFSRYYASLFNAPDMLTLLVEPRKTLQTFLEDIRQIRN SITVQQPLSGAQIQLLDSYYTQITRSVQRAFEEGRTRVNPAALMAVAESDLHAFWEKAQK LDRTTGGDLFEVRDSIEKPTQRATRTPEQREQLISGVLWGAVGVMVIAIIVGGFWLVTSS KPQQAVVAATGAPPAQEMRETPSSRETLTRMGVTWDENNFRSAINRNDTRVALLFLQGGM DWKMSWTEEALSAGYDDVLEVMLRYRLQMTEQKPCRRFINTLSHAMANGESLTSMRKQYL KAFCTVPAVVKRQQHDADMATRRAKTQPDASTKKWQSIQTAIYEVIR >gi|333596726|gb|GL892086.1| GENE 12 13527 - 14060 196 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153832774|ref|ZP_01985441.1| acetyltransferase, including N-acetylases of ribosomal protein [Vibrio harveyi HY01] # 1 148 1 150 169 80 37 4e-13 MPALTTTRLTCSPLQEQDWPFFLSLQQNPEVMRFVAPARSEADIREAFEARLLPWTPGSA HWLCLVVRETASQTPLGVTGYVHREADCAEVGFLFTTSAQGKGYGFESLRAVCDFALTQG NIRRLTATVTAGNITSRRLLEKTGFQLEGELRESYFLSGQWHNDWLFGLLKKEYPFS >gi|333596726|gb|GL892086.1| GENE 13 14138 - 14476 257 112 aa, chain + ## HITS:1 COG:STM3605 KEGG:ns NR:ns ## COG: STM3605 COG3772 # Protein_GI_number: 16766891 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 1 98 1 97 118 76 44.0 1e-14 MTGYAMQISSAAIALIKKQQGLSLAKYRDEKGIWVIGYGHVIRQWEKFNGLITPAEAEYL LFNDIQLCETLLREMNTRPLTQQQHDALILTLFSFGAESPLPEKILQAVARV >gi|333596726|gb|GL892086.1| GENE 14 14455 - 15057 379 200 aa, chain - ## HITS:1 COG:yhjB KEGG:ns NR:ns ## COG: yhjB COG2197 # Protein_GI_number: 16131392 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 193 1 194 200 191 50.0 1e-48 MRVIMFDRQSLFIHGAIYSLQKLIPEIDMTGARQTDELWAQLSASPSAIVMIDGELIRDN GVALLEEIMDRFPTARVVLVLTKKERRWVEQMFQRNVVAIVPRNANPERFSAVLDSVSRG MVCFPGEWLKQHSSQDELSLLSERQREVLKLLAAGESNKEIGRNLNISAATVKAHLETLF RRLDVKNRTQAAMYYTRATA >gi|333596726|gb|GL892086.1| GENE 15 15232 - 15990 819 252 aa, chain - ## HITS:1 COG:RSc1730 KEGG:ns NR:ns ## COG: RSc1730 COG1028 # Protein_GI_number: 17546449 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 5 252 10 256 256 285 64.0 5e-77 MSERIALVTGGSRGLGKNAVLKLAAEGAGIILTWNSSQQEAQDVVQEIERKGGKAAALQL NVGDTASFTRFAQQVKETLKQVWQRDTFDYLVNNAGTGLYAPYTETTEAQFDDAVNIHFK GPFFLTQQLLPLIKDGGRILNVSSGLARFTQPGSGTYAAMKGAMEVLTRYQAKELGARGI SVNIIAPGAIETDFGGGRVRDNAELNQLLASQTALGRVGLPDDIGDAIVALLSDKLGWMN AQRIEVSGGMFL >gi|333596726|gb|GL892086.1| GENE 16 16128 - 17009 982 293 aa, chain + ## HITS:1 COG:STM3607 KEGG:ns NR:ns ## COG: STM3607 COG0583 # Protein_GI_number: 16766893 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 289 7 295 299 412 68.0 1e-115 MQLFLRVAELESFSRAAETLSLPKGSVSRQIQALENVLGTQLLHRTTRRVSLTQDGMVYY ERAKDLLMNLDELDGMFLHDPSTISGRLRVDMPVAIARNVVIPKLPAFLQQYPGIELELS SSDRLVDVIREGFDCVVRVGNLKDSGLIARPLGQLSVINCASPDYLTRFGFPETLDDLAS HALIHYSATLGTRPQGFEYYNGSATQWVKTGGVLTVNSTETYQAACIAGLGIIQVPRVGV RDALRTKKLVEILPQYRAEPMPVSLIYPHRRNLSRRVHVFMEWLTELTKGYVD >gi|333596726|gb|GL892086.1| GENE 17 17123 - 18085 1113 320 aa, chain + ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 319 14 336 337 536 83.0 1e-152 MDNEPEAPKEPGTASKALGTVTGIAEKIQQIPAIAHLIRAAERFNDRMGNQFGAAITYFS FLSMIPILMVSFAAAGFVLASHPTLLQDIFNKILTNVSDQTLATTLKSTINTAVQQRTTV GIVGLLIALYSGVNWMGNLREAIRAQSRDVWERTPQDQEKIWVKYLRDFISLIGLLVALV ITLSITSVAGSAQQMIISALYLDYIEWLKPAWRGIGLAISIFANYLLFFWIFWRLPRHRP RKKALMRGTLIAAIGFEVIKIVMTYTLPSLVKSPSGAAFGSVLGLMAFFYFFARLTLFCA AWIATAEYKDDPRMPGKTHR >gi|333596726|gb|GL892086.1| GENE 18 18346 - 19668 2068 440 aa, chain + ## HITS:1 COG:STM3609 KEGG:ns NR:ns ## COG: STM3609 COG0477 # Protein_GI_number: 16766895 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 440 1 440 440 624 91.0 1e-179 MQATATTLNEGAEHVPVNSRNKVVVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPT AATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKVTLVASLLTMGISTVAIGLLPTYETI GILAPVLLALARFGQGLGLGGEWGGAALLATENAPARKRALYGSFPQLGAPIGFFFANGT FLLLSWLLTDEQFMSWGWRIPFVFSAVLVLIGLYVRVSLHETPVFAKVAAAKKQVKVPLG TLLTKHVRVTVLSTFIMLATYTLFYIMTVYSMTYSTAAAPVGLGLPRNEVLWMLMMAVIG FGVMVPIAGLLADKFGRRSSMIVITSLIILFALFVFPPLLGSGSPALVMAYLLIGLSLMG LTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIATWLQANYGLFYVGVYLAA MAALTLIALLLTHETKHQAL >gi|333596726|gb|GL892086.1| GENE 19 19729 - 21771 2343 680 aa, chain - ## HITS:1 COG:ZyhjG KEGG:ns NR:ns ## COG: ZyhjG COG2982 # Protein_GI_number: 15804068 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 1 680 6 691 691 1182 87.0 0 MTKTTRVISWTAGIFLLLIVVLIIIIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVW ERQKEETGWRSWVPWPHVHADDIILGNPPDIPEVTMIHLPRVEATLAPLALLTKTVYLPW IKLQQPDARLIRLSEKNNNWTFDLASSGDKDPNAQPSSWSFRLDNILFDRGRIAIDDKVS KADVEILVDPLGKPLPFSEVTGSKAKGDDSKAGDYVFGLTAKGRYNGQPLTGKGKIGGML ALRSEGTPFPVQADFRSGNTRVAFVGTVNDPMNMGGVDLQLKFAGDSLGELYDLTGVLLP DTPPFETDGHLVAKIDTEKSSVFDYRGFNGRIGDSDIHGTLTYTTGKPRPKLEGDVESRQ LRLADLGPLIGVDSGKGTKSKEVKKDVQPAGKVLPYDRFETDKWDVMDADVRFKGRKIEH GSTLPLSNLSTHIILKNADLRLQPLKFGMAGGTISSNIHLEGDKKPMQGRAEIQARRLKL KELMPDVELMQKTLGEMNGDADIRGTGNSVAALLGSGNGNLKLLMNDGLVSRNLMEILGL NVGNFIIGQIFGDDEVRVNCAAANLDLVNGVARPQIFAFDTENAVINVTGTASMASEQLD LTIDPESKGIRIITLRSPLYVRGTFKDPQAGVKAGPLIARGAVAAALATLVTPAAALLAL ISPSEGEANQCRTILSQMKK >gi|333596726|gb|GL892086.1| GENE 20 21837 - 22610 911 257 aa, chain - ## HITS:1 COG:STM3611 KEGG:ns NR:ns ## COG: STM3611 COG2200 # Protein_GI_number: 16766897 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 4 257 3 255 255 408 78.0 1e-114 MKSEQVIQRLNTTPEASIENLQEHRYWLQCERAYTYQPIYRTDGRLMAIEVLTVVTHPSN PSQRIAPDRYFAEVAVRQRIDVLEEQLRMLATKQAFFEQHGILASVNVDGPTLMALRQNA TLQALIATLPWMRFELVEHVRLPQDSSFASMCEFGPLWLDDFGTGMANFSALSEVRYDYI KVARDLFIMLRQTPEGRNLFTMLLQLMNRYCQGVIVEGVETLEEWRDVQNSPAAAAQGYF LSRPVPMDTLEKVITTL >gi|333596726|gb|GL892086.1| GENE 21 22841 - 23770 1208 309 aa, chain + ## HITS:1 COG:kdgK KEGG:ns NR:ns ## COG: kdgK COG0524 # Protein_GI_number: 16131398 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 309 74 382 382 545 88.0 1e-155 MSKKIAVIGECMIELSQKGAEVSRGFGGDTLNTSVYIARQVAPDALSVSYVTALGTDSFS QQMLEAWQSENVGTSLIQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEAAAA ICEELATFDYLYLSGISLAILSQQSREKLLSLLRECRANGGKVIFDNNYRPRLWASREET QQVYQQMLECTDIAFLTLDDEDALWGEKPVDEVIARTQAAGVSEVVIKRGAESCLVAIAG EAVTEVPAVKLAKEKVIDTTAAGDSFSAGYLAVRLTGGTPEAAAQRGHLTASTVIQYRGA IIPREAMPA >gi|333596726|gb|GL892086.1| GENE 22 23833 - 25323 1721 496 aa, chain - ## HITS:1 COG:yhjJ KEGG:ns NR:ns ## COG: yhjJ COG0612 # Protein_GI_number: 16131399 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli K12 # 1 496 1 498 498 775 80.0 0 MQGTKIRLLTGGLLMMAAASYVQADALQPDPAWQQGTLANGFQWQVLSTPQRPSDRIEIR LSVNTGSLTESTQQTGLSHFIPRLALTQSGSLQAVQVRSLWQQAIDPKRPLPPAVVSYDY TMFNLSLPNNRNDLLKEALTYLSDATGKLAITPETVNYALSNSDMVATWPTDTKEGWWRY RLKGSTLLGHDPAEPLKQPVDAAQVKSFYQQWYTPDAMTLIVVGNVDSRAVIEQINKAFG DLKGKRETPAPVPTLSPLRPETVSIMTDTVRQDRLSMMWDTAWQPIRESSALLRYWRADL AREALFWHVQQTLSKNNVKDIGLGFDCRVLFQRAQCAINVESPGDKLNANLGVVAKELAK VRKEGLSEEEFNALVAQKSLELQKLFATYARADTDILISQRIRSLQNQVVDIAPEQYQKL RQDFLNGLTVEMLNQDLRQQLSQDMALILLQPKGEPEYDMKELKATWNAIMATPPQPAQT AADDLHQDASDIPQGQ >gi|333596726|gb|GL892086.1| GENE 23 25546 - 26832 1709 428 aa, chain - ## HITS:1 COG:ECs4408 KEGG:ns NR:ns ## COG: ECs4408 COG1301 # Protein_GI_number: 15833662 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 699 94.0 0 MKTSLFKSLYFQVLTAIAIGILLGHYYPELGAQMKPLGDAFVKLIKMIIAPVIFCTVVTG IAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVY AEQAKDQGIVAFLLDVIPSSVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIES FSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIVCFYITCILFVVVVLGS IARATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLVVLLLSSKGAAGVTGSGFIVLAATISA VGHLPVAGLALILGIDRFMSEARALTNLIGNGVATVVVAKWVKELDHKKLNDTLNNRPSE DKTPGLSS >gi|333596726|gb|GL892086.1| GENE 24 26992 - 28965 2074 657 aa, chain - ## HITS:1 COG:STM3615_3 KEGG:ns NR:ns ## COG: STM3615_3 COG2200 # Protein_GI_number: 16766901 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 401 649 1 249 257 402 79.0 1e-111 MAMVSAVTMLFVFIFCVILLFHSVQQNRYNTASQLESIARSVREPLSASILKGDIPEAES ILKRIQPAGIVSRADVVLPNQFQALRMSFIPERPVPMMVMRLFELPVQISLPLYSLERPA NPQPLAYLVLQADSYRMYKFVMSWVATLVTTYLLLTLMLSVALTWCINRLIVHPLRRIAR ELNDLSPQEHMGHQLPLPRLHHDDEIGMLVRSYNINQQRVLRQQEELSNNATRFPVSDLP NKAFLMALLEQTVARQQTTALMVIACETLQDTAGVLKESQREMLLLTLVEKVKSVLAPRM VLTQVSGYDLVVIAHGVKEPWHAITLGQQVLTVINERLPIQGIQLRPSASIGIAMYYGGL TAEQLYRRAFSAAFTARRKGKNQIQFFDPEQMEKAQQRLTEESDILTAMDNRQFALWLQP QVNLRTGEVTSAEALLRMQQPDGTWELPEGMIERIESCGLMVTVGYWVLEESCRQLAAWQ QRGITLPLSVNLSALQLMHPTMVPEMLELIHRYRIQPHTLILEVTESRCIDNPDDAVAIL KPLRNAGIRIALDDFGMGYSGLRQLQHMKTLPVDVLKIDKTFVEGLPEDCSLVQAIIQMA HSLNLHVIAEGIETDAQREWLAAAGVESGQGFLFDRAVPSDIFEQRYLADAGNNAKV >gi|333596726|gb|GL892086.1| GENE 25 29119 - 32550 3588 1143 aa, chain - ## HITS:1 COG:yhjL KEGG:ns NR:ns ## COG: yhjL COG0457 # Protein_GI_number: 16131402 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 1 1143 27 1166 1166 1582 74.0 0 MPLAQAANSPQQRQLLEQVRLGESTQREDLVRQSLYRLELIDPNNPDVIAARFRYLLRQG DTAGAQKELDRLKGMAPDSSAYQSSRTTMLLSTPDGRQALQQARLLATTGHTQEAIAAYD KLFDGKPPSGDIATEYWNVVAKEPARRNSAINQLKKINASSPGNVTLQSSLAQLLFQSGR RDEGFAVLQEMAKSNNGRSQASDMWYQQIKDQPASSASVSALQQYLSVFSDGDNVTAARA QLEAQQKQLSDPAFRAKAEGLAAVDAGQGSKAVAELQKVVSANHADSEAVGALGQAYSQK GDRARAVAQFEKAIALDPQSDNRGKWDSLLKVNRYWLLIQQGDNALKANNTAQAERYYQQ ARNIDNTDSYAVLGLGDAAAARKDNDAAERFYRQALRMDSGNSNAVRGLANIYRAQSPQK ATQFIQSLSASQRRSIDDIERSLTNEQLSAQAEQLESEGKYAQAAEIQRRRLALSPGDVW ITYRLSRDLSSAGQRSQADNLMRQLASQKPGDPDQIYASGLYLSGNDQDRAALAHLNTLP RDKWNSNIQELADRLQSNQVLETANRLRDSGKEQEAETLLRQQPPSTRIDLTLADWAEQR GDHEAAKTAYNTVLQREPQNEDAILGLTEVYLAQGNKDAARKALAKLPAAQNGEPLSINM QRRLAMAQAGLGDPAAAEKTFNAILPQAKSQPPSMESALVMRDAARFQAQNGQPQQALDT WKDAMVSSGITTTRPTDNDSFTRLTRNDEKDDWLKRGVRSDAGDLYRQQDLNVTLQHDYW GSSGTGGYSDLKAHTTMLQVDAPLADGRMFFRSDLVNMNAGSFDTDNGTYDPTWGTCAET PCHGSTNQSANGASVAVGWQNKTWAWDIGTTPMGFDVVDVVGSLSYSNDLGPIGYTLNAH RRPISSSVLAFAGQKDPNTDTTWGGVRATGGGVSVSYDKGEANGIWSSLSADSLTGKNVE DNWRVRWMTGYYYKLINQNNERLTVGVSNMLWHYDKDLSGYSLGQGGYYSPQEYVSFALP VNWRKRTENWSWELGGSVSWSHSKTKDVMRYPLQGLIPDNEPGRYTDKGVMETGSSSSGT GYTARAIVERRVTSNWFVGLGVDIQEAKDYTPSHALLYVRYSAAGWQGDMDLPPEPLVPY ADW >gi|333596726|gb|GL892086.1| GENE 26 32583 - 33689 818 368 aa, chain - ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 565 75.0 1e-161 MKIFRGCVVAALMLAAANLHAACRWPAWETFKQDYMSDGGRVIDPSDARKITTSEGQSYG LFFALAANDRKAFDLLLAWTRDNLAEGDLAQHLPAWLWGKKDDETWAIIDSNSASDADIW IAWSLLEAGRLWKNPDYTRTGKALLTRIASEEVVKVPGLGSMLLPGKVGFAEENAWRFNP SYLPPQLASYFTRFGAPWTTLRETNLRLLLETAPKGFSPNWVKYQKKGGWQLSQDASLTG SYDAIRVYLWVGMMNDSDPQKARLLARFKPMATTTIKQGLPPEKVDVATGKRTGDGPVGF SASLLPFLQNRDAQAVQRQLVADRFPDKNAYYSYVLTLFGQGWDQHRFRFTAQGELLPDW GQECARSH >gi|333596726|gb|GL892086.1| GENE 27 33696 - 36119 2665 807 aa, chain - ## HITS:1 COG:no KEGG:ECL_04937 NR:ns ## KEGG: ECL_04937 # Name: not_defined # Def: cellulose synthase regulator protein # Organism: E.cloacae # Pathway: not_defined # 1 807 1 807 807 1427 91.0 0 MKTKLSWLCAVAMGMSALPATVANAAPDNAATTPAPTVPVVAQATDPVVTAAPGQTENVV PNQPTTGNTLPADNPVVGQVMPGVPGASAPVVAENTPSRDVKLTFAQIAPPPGSMVLRGI NPNGGIEFGMRSDEVVSKAMLNLEYTPSPSLLPVQSQLKVYLNDELMDVLPVTKEQLGKK TLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLDVGRNSSLQMTYQPLALKND LSAFPVPFFDPRDNRPLNLPMVFAGSPDVTEQLAASIVASWFGSRSGWRGQSFPVMYDKM PDKNAIVFATNTKRPAFLRDHPEVKAPTIEMISHPDNPYVKLLVIFGRDDKDLVQAAKGI AQGNILFRGNSVVVDEVKPLLARKPYDAPNWVRTDRAITFGELKTYEEQLQSTGLEPSPV SLSLNLPPDLYLLRTNGIDINLNYRYTAPATKDSSRMDISLNNQFLQSFSLTSSQETNRL MLRLPVLQGLLDGKTDVSIPALKLGAVNQLRFNFQYMNPMPGGSVENCITFQPVQNHVVI GDDSTIDFSKYYHFIAMPDLRAFANASFPFSRMADLSESIVVMPKAANEGQVTTLLDTMG IVGAQTGLPAINVTVTDDGSQIQNKDADIMVIGNIPDKLKDEKRVDLLVQAAQSWVNTPL RQTEFPSIMPDSGDRQANIRTTVSSTGPMAAIVGFQSPYNDQRSVIALLADSPRGYELLN TAMNDSGKRAAMFGSVSVIRESGVNSLRVGDVYYVGHLPWFERLWYALSNHPVLLAVLAA LSVVLLAWVLWRLLRIISRRRLNPDHE >gi|333596726|gb|GL892086.1| GENE 28 36130 - 38745 2639 871 aa, chain - ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 871 17 888 888 1594 86.0 0 MSRLTHWLLIPPVSSRLSERYRHYRHHGASSLSAALGCFWMILAWMFIPLEHPRWQIIRA RHGELYPHINPDKPRPLDPARYAIQSIWLLATSTGGERKTSRWRSFDRVQNLREHYHQWL DRLPDRVGDRTGHLDNHKELGHLHPGLRRFILGVVVVFSLILALVCITQPFNPLAQFTFL ILLWGVALLVRRIPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLVLLFAE TYAWIVLVLGYFQVIWPLNRQPVPLPKDTTQWPTVDLFVPTYNEDLSVVKNTIYAALGID WPKDKIKIWILDDGGRAEFRQFADEVGVEYIARTTHEHAKAGNINNALKYAKGEFVSIFD CDHVPTRSFLQMTMGWFLKEKELAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQ DGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRLGYTSAYMRIPQAA GLATESLSAHIGQRIRWARGMVQIFRLDNPLMGKGLKLAQRLCYVNAMFHFLSGIPRLIF LTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWY IAPPTMVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNIVGVIVGVWRYFYG PENEILTVFVSMAWVFYNLIILGGAVAVSVESKQVRRAHRVEISMPAAIARDDGHLFSCT VHDFSDGGLGIKINGQAKVLEGQKVNLLLKRGQQEYVFPTQVVRVRGNEVGLQLMPLTKK QHIDFVQCTFARADTWALWQDSFPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKLIFRS LTSLVSWVVSFIPRRPERDEAKQADPVMAQQ >gi|333596726|gb|GL892086.1| GENE 29 38742 - 39494 840 250 aa, chain - ## HITS:1 COG:STM3620 KEGG:ns NR:ns ## COG: STM3620 COG1192 # Protein_GI_number: 16766906 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 248 1 248 250 386 78.0 1e-107 MAVLGLQGVRGGVGTTSVTAALAWSLQVLGESVLVIDACSDNLLRMSFNVDFAHANGWGR ALLDDKDWRDAGLRYTSQLDLLPFGQLTETERGNEAAYQRLFSRFTTALQSLKESGHYQW ILLDLPHGAASLTRQLLAQCDHVLSIANVDANCHIRLHQQAMPANAHILINDLRIGSQIQ DDLYQVWLQSQRRLLPMVIHRDEAMAECLASKQPLGEYRSDSLAAEEILTLANWCLLHFA KRPESAGSSV >gi|333596726|gb|GL892086.1| GENE 30 39506 - 39694 59 62 aa, chain - ## HITS:1 COG:no KEGG:Ent638_3932 NR:ns ## KEGG: Ent638_3932 # Name: not_defined # Def: putative cytoplasmic protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 62 1 62 62 104 95.0 1e-21 MQNNEPATPVDSSLGYTFQNDFLALTQAFSLPEIDYTDISQREQLAAAIKRWPLLAEFAQ QQ >gi|333596726|gb|GL892086.1| GENE 31 39923 - 41431 874 502 aa, chain + ## HITS:1 COG:no KEGG:ECL_04941 NR:ns ## KEGG: ECL_04941 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 501 19 519 520 914 87.0 0 MPVGGVWWVNTDRNEDAISLVNQTIAAQGKDSRVAVITMGEAPKSIIRLDSDRGPQTVRL FSMPAEADGLDFLPRDIQCSIVPEHYLLILKCSNNGLQNIPSEKLLKWLGRINRWAKNQN CTLLVVNPGSNNDKLFSLLMSEYRSLYGLASIRIQTDSHLYDVAFWCNEKGVSSRQQLTL KHVGDEWHLAQQEETVVQPRSDEKRILSHIAVLEGAPALSEHWSLFDTNEALFDEARTTQ AATIIFSLIQNNQIETLARHIHTLRRQRGSALKIVVRENNTSLRATDERLLLGCGANMVI PWNAPLSRCLTLIESIQGQQFNRHVPEDISTLLSMTQPMKLRGYQKWDTFCDAVGNMMSN TLLPADGKGVMVALRPVPGIRVEQALTLCRPNRIGDIMTIGDNRLVLFLSFCRVNDLDTA LNHIFPLPTGDIFSNRMVWFEDNLISAELVQMRTLAPEQWAKPLPVTSGAKPVLNAKHDG HIWRRVPEPLRLLDENKESAPL >gi|333596726|gb|GL892086.1| GENE 32 41428 - 41622 128 64 aa, chain + ## HITS:1 COG:no KEGG:ECL_04943 NR:ns ## KEGG: ECL_04943 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 1 64 1 64 64 106 84.0 3e-22 MNISDIIQLVVLCALIFLPLGYYARHSLRRIRDTVRLLFVKPRYIKPAGTLTRAPNVKAN RKHD >gi|333596726|gb|GL892086.1| GENE 33 41615 - 43294 1534 559 aa, chain + ## HITS:1 COG:no KEGG:ECL_04944 NR:ns ## KEGG: ECL_04944 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 559 1 559 559 1055 94.0 0 MTNSTYTSSAPSPLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFMAFLLMPVPN RRLHRIRHWVAIPIGFALFWHDTWLPGPESIMSQGSQVAGFSADYMLDLVERFINWQMIG AVFVLLVAWLFLSQWIRVTVFVVAIMIWLNVLTLTGPSFSLWPAGQPTTTVTTTGGSAAA TVATAGDTPVVGDIPAQTAPPTSTNLNAWLSSFYAAEDKRQTKFPDTLPADAQPFELLVI NICSLSWADVDAAGLMSHPLWSHFDIQFKDFNSATSYSGPAAIRLLRASCGQPSHKNLYQ PAANQCYLFDNLAKLGFTQHLMMGHNGQFGNFLKEVREQGGMQAPLMDQKGLPVTLLGFD GSPVYDDTAVLQRWLDTVGKEEGTRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDE LNAFFNELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITNVPAGIKFFGMKAP HQGAPVEITQPSSYLAISELVARAVDGKLFVEDSVNWDQLTSGLPQTAEVSENANAVVIQ YQNKPYVRLNAGDWVPYPQ >gi|333596726|gb|GL892086.1| GENE 34 43331 - 44293 786 320 aa, chain - ## HITS:1 COG:ECs4900_2 KEGG:ns NR:ns ## COG: ECs4900_2 COG0340 # Protein_GI_number: 15834154 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Escherichia coli O157:H7 # 79 320 3 244 245 417 85.0 1e-116 MKDNTIPLTLIGILADGEFHSGEQLGEQLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL PEPIQLLNEETIRSQIGHGNVAVLPVIDSTNQYLLDRLSELKSGDACVAEYQQAGRGRRG RKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEVLHDLGADQVRVKWPNDLYLN DRKLAGILVELTGKTGDAAQIVIGAGLNMVMRNVQNDVVNQAWTNLQEAGITIDRNTLAV RMINELRSSLTLFEQEGLAPFLSRWEKLDNFINRPVKLLIGDKEIYGTSRGIDAQGALLL EQDGVIKPWVGGEISLRSAE >gi|333596726|gb|GL892086.1| GENE 35 44290 - 45318 877 342 aa, chain - ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 586 78.0 1e-167 MNHSLKPWNTFGIQRNANQIVRADSAQQLLNAWQNATENGEPVLILGEGSNVLFLDDFAG TVIVNRIMGIERKESADSWHLHVGAGENWHHLVQYTLEKGMPGLENLALIPGCAGSSPIQ NIGAYGIELKHVCEYVDCIELSTGTAKRLTAEQCRFGYRDSIFKHDYQDRFVIVAVGLRL AKAWKPVLTYGDLTRLDPATVTPREVFDSVCHMRMTKLPDPKVNGNAGSFFKNPVISSEN AKTLLTGWPTAPHYPQADGSVKLAAGWLIDQCELKGTTIGGAAVHRQQALVLINQSNATS EDVVNLAHHVRQCVGEKFNVWLEPEVRFIGRTGEVNAVETIA >gi|333596726|gb|GL892086.1| GENE 36 48579 - 49124 500 181 aa, chain - ## HITS:1 COG:ECs4778 KEGG:ns NR:ns ## COG: ECs4778 COG4635 # Protein_GI_number: 15834032 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 282 76.0 2e-76 MKTLILFSTRDGQTREIASYLASELTELGIYSDVVNLNRTEQIAWQDYDRVVIGASIRYG HFHPALDRFVKKHTAELAKLPGAFYSVNLVARKAEKRTPQTNSYTRKFLLSSPWQPDICS VFAGALRYPRYRWYDRFMIRLIMKMTGGETDTRKEVVYTDWAQVASFAREIARLTDDSRV K >gi|333596726|gb|GL892086.1| GENE 37 49135 - 50586 1666 483 aa, chain - ## HITS:1 COG:STM3986 KEGG:ns NR:ns ## COG: STM3986 COG0168 # Protein_GI_number: 16767256 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Salmonella typhimurium LT2 # 1 483 1 483 483 838 97.0 0 MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALTIGSLLWWPNRRE KGELKSREGFLIVVLFWTVLGSVGALPFIFSEQPNLTVTDAFFESFSGLTTTGATTLVGL DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE TAKTLWLIYVLLTVACALALWFAGMPAFDAIGHSFATIAIGGFSTHDASVGYFDSPTINT IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQLTLVVICTLVLWFHDVYNS AVTTLNQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGV DDFSAFASVVATLNNLGPGLGVVADNFASMNPVAKWILIANMLFGRLEVFTLLVLFTPTF WRE >gi|333596726|gb|GL892086.1| GENE 38 50629 - 51243 323 204 aa, chain - ## HITS:1 COG:STM3985 KEGG:ns NR:ns ## COG: STM3985 COG1739 # Protein_GI_number: 16767255 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 204 1 204 204 337 85.0 7e-93 MESWLIPAEPVTFVEEIKKSRFITLLAHTDGVEAAKAFVESVRAQHPDARHHCVAWVAGP PDDSQQLGFSDDGEPAGTAGKPMLSQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGG VQQALNQLITTRKTPLTEYTLLCDYAQLSGIEALLKQFNGVIAHSDYQAMVQLRVALPQA ELAAFSAKLADFSRGSLQLLPIEE >gi|333596726|gb|GL892086.1| GENE 39 51243 - 52574 1748 443 aa, chain - ## HITS:1 COG:STM3984 KEGG:ns NR:ns ## COG: STM3984 COG0006 # Protein_GI_number: 16767254 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 443 1 443 443 855 90.0 0 MDSLASLYKNHIVTLQERTRDVLARFKLDALLIHSGELMNTFLDDHAYPFKVNPQFKAWV PVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEEIDVIALPKADGIGSQLP AARGNIGYIGPAPERALGLDIPADKLNPKGVLDYLHYYRAYKTDYELYCMREAQKTAVNG HRAAHEAFQSGMSEFDINQAYLTATGHRDTDVPYSNIVALNEHASVLHYTKLDHQVPAEM RSFLLDAGAEYNGYAADLTRTWAANADTDFAQLIKDVNDEQLALIGTMKAGTSYVDYHIQ FHQRIAKLLRKHQIVKDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDTGTHL AAPSKYPYLRCTRVLAPRMVLTIEPGIYFIESLLAPWREGQFSKHFNWEKIEALKPFGGI RIEDNVVIHENSIENMTRDLKLA >gi|333596726|gb|GL892086.1| GENE 40 52765 - 54954 3054 729 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 307 729 1 423 423 796 93.0 0 MLYKGDTLYVDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQSDLKGLLLRSN KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQAQK IGLVDGVVKPEKLVEGAVAILRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV MQTAGKHYPAPITAVKTIEAAARLGRDEALKLENQSFVPLAHTNEARALVGIFLNDQFVK GKAKQLTKSVETPKHAAVLGAGIMGGGIAYQSAWKGVPVVMKDINEKSLTLGMTEAAKLL NKQLERGKIDGLKLSGVISTIQPVLEYSGFDRVDVVVEAVVENPKVKKAVLAETEDKVRP ETVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIAKVVAW ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKP KKEEDAAVDGLLADVSQPKRDFTDDEIIARMMIPMINEVVRCLEEGIIASPAEADMALVY GLGFPPFHGGAFRWLDTLGSARYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPAVEPA RPVGALKTA >gi|333596726|gb|GL892086.1| GENE 41 54964 - 56127 1374 387 aa, chain + ## HITS:1 COG:STM3982 KEGG:ns NR:ns ## COG: STM3982 COG0183 # Protein_GI_number: 16767252 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 387 1 387 387 716 95.0 0 MEKVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAALDDIYWGCVQQ TLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH MGHVPMSHGVDFHPGMSRNVAKAAGMMGLTAEMLSRLHGISREMQDTFAARSHARAWAAT QSGAFKNEIIPTGGHDADGVLKQFSYDEVIRPETTVEALSTLRPAFDPVTGTVTAGTSSA LSDGAAAMLVMSESRARELGLTPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSAS DIDLFEMNEAFAAQILPCIKDLGLMDQIDEKINLNGGAIALGHPLGCSGARISTTLINLM ERKDAQFGLATMCIGLGQGIATVFERV >gi|333596726|gb|GL892086.1| GENE 42 56330 - 58399 3034 689 aa, chain - ## HITS:1 COG:ECs4442 KEGG:ns NR:ns ## COG: ECs4442 COG0751 # Protein_GI_number: 15833696 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 689 1 689 689 1258 93.0 0 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRA HVKGESAEALLPDMIATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDTVIPATILGV ASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKADAEDAARKIGGN ADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPN FIFVANIESKDPSQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGT LRDKTDRIAELSGWIAREIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GEAEDVAVALNEQYQPRFAGDDLPSNPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNAKVVDDVIDFMLGRFRAWYQDEG YSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEAASALAAANKRVSNILAKSDETLNER VNAATLKEPEEISLAMQVVVLRDKLEPYFAEGRYQEALVELAELRDVIDAFFEKVMVNVE DKELRINRLSMLEKLRELFLRVADISLLQ >gi|333596726|gb|GL892086.1| GENE 43 58409 - 59320 1233 303 aa, chain - ## HITS:1 COG:STM3656 KEGG:ns NR:ns ## COG: STM3656 COG0752 # Protein_GI_number: 16766941 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 303 1 303 303 623 98.0 1e-178 MQKFDTKTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTSLRALGPEPMATAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPITGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALETPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCN RNK >gi|333596726|gb|GL892086.1| GENE 44 59481 - 59786 276 101 aa, chain - ## HITS:1 COG:no KEGG:ECL_00206 NR:ns ## KEGG: ECL_00206 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 101 1 101 101 157 79.0 1e-37 MMMKRGASLFLLLLLTGCTASEEMPAQKAQQGKMSPERSLNMEQLCRDQAAHRYNSEAQK IHINGFERFQGSYELKGYTARKEGFVCSFDADGQFLHLSMR >gi|333596726|gb|GL892086.1| GENE 45 59971 - 60966 1018 331 aa, chain + ## HITS:1 COG:STM3658 KEGG:ns NR:ns ## COG: STM3658 COG3274 # Protein_GI_number: 16766943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 519 80.0 1e-147 MQSKINWIDNLRGIACLMVVMIHTTTWYVTNAHSISPVNWDVANILNSASRVSVPLFFMI SGFLFFGERSAQPRHFIRIVSCLLFYSAISLLYIVLFTSINAERSLLNLLQKPVFYHLWF FFAIIVIYLVSPLIQVKNVSGKMLLALMVVIGIVANPNTISQKIDGFEWLPVNLYINGDT FYYVLYGMLGRAIGMMETQKRGVNWLCAAAFIAGVFIISRGTLHELQWRGNFADTWYLYC GPMVFICAISLLTLVKNTLNARPLPVLGFISRHSLGIYGFHALVIHALRTRGVELKSWPV LDIVWIFTATLVVSLLLSMLLQRIDTRRFVS >gi|333596726|gb|GL892086.1| GENE 46 61019 - 62473 1217 484 aa, chain - ## HITS:1 COG:ECs4447 KEGG:ns NR:ns ## COG: ECs4447 COG1070 # Protein_GI_number: 15833701 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 793 83.0 0 MYIGIDLGTSGVKAILLSEQGDVLATQTEKLQVSRPHPLWSEQDPEQWWQATDRAMKALG EQHSLRDVKALGIAGQMHGATLLDSQHRVLRPAILWNDGRCAEECAILEERVPTSREITG NLMMPGFTAPKLLWVQRHESEIFRQVAKVLLPKDYLRFRMTGDFASDMSDAAGTMWLDVA KRDWSEAMLDACQLTRDHMPALFEGSEITGALQPSIAERWNMPAVPVVAGGGDNAAGAVG VGMVEAGQAMLSLGTSGVYFAVSDGYRSNPESAVHSFCHALPGKWHLMSVMLSAASCLDW AAKLTGMADVPALITAAQQADDNAGAVWFLPYLSGERTPHNNPEAKGVFFGLTHQHGPAE LARAVLEGVGYALADGMDVVHDCGLTPSSITLIGGGARSSYWRQMLSDISGLQLDYRTGG DVGPALGAARLAQIALNPDKPLHLLLPQLPLEQEHRPDARNHARYAERRDVFRKIYQQLL PLMS >gi|333596726|gb|GL892086.1| GENE 47 62534 - 63919 1814 461 aa, chain - ## HITS:1 COG:STM3661 KEGG:ns NR:ns ## COG: STM3661 COG2115 # Protein_GI_number: 16766946 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Salmonella typhimurium LT2 # 22 461 1 440 440 867 93.0 0 MSIHYYSRSKTTPHTLIMELNMQAYFDQLDRVRFEGTKTTNPLAFRHYNPDELVLGKRME DHLRFAACYWHTFCWNGADMFGVGSFDRPWQQPGEAIELAKRKADVAFEFFHKLNVPYYC FHDVDVSPEGASLKEYLNNFAQMVDVLAEKQQQSGVKLLWGTANCFTNPRYGAGAATNPD PEVFSWAATQVVTAMNATHQLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVDH KHKIGFRGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSF HHEIASAIALGIFGSVDANRGDPQLGWDTDQFPNSVEENALVMYEIIKAGGFTTGGLNFD AKVRRQSTDKYDLFYGHIGAMDTMALALKVAARMIEDGELDKRVAKRYSGWNSELGQQIL KGQLSLAEIAKYAEQHQLAPQHQSGHQELLENLVNHYLFDK >gi|333596726|gb|GL892086.1| GENE 48 64227 - 65219 1034 330 aa, chain + ## HITS:1 COG:xylF KEGG:ns NR:ns ## COG: xylF COG4213 # Protein_GI_number: 16131437 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Escherichia coli K12 # 1 330 1 330 330 538 90.0 1e-153 MKIKNLTLTLCTTLLLASFAGHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAEVFV QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINNAD IDYYISFDNEKVGELQAKSLVAKVPQGNYFLMGGSPVDNNAKLFRQGQMKVLKPYIDEGK IKVVGDQWADGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA ISGQDADLAGVKRIIAGTQTMTVYKPITELANTAAEIAVELGNGQQPKADATLNNGLKDV PARLLTPIEVNKENIDATVVKDGFHKKSEL >gi|333596726|gb|GL892086.1| GENE 49 65292 - 66833 220 513 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 256 483 9 240 329 89 28 6e-16 MSYLLEMKSITKAFGAVKAVDNVSLRLNPGEVMSLCGENGSGKSTLMKVLCGIYPHGSYE GEIVFAGEVLQATHIRDTERKGIAIIHQELALVKHLTVLENIFLGAELSRHGVLDYDTMT LRCEKLLAQVSLAISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETAV LLNIIRDLQNHGIACIYISHKLNEVKAISDTICVIRDGQHIGTREAEGMSEDDIITMMVG RELTALYPSEPHAIGEELLRVENLTAWHPVNRHIKRVDNLSFSLHRGEILGIAGLVGAGR TEAVQCLFGVWPGRWEGKIYIDGQPVKIDNCQQAIAKGIAMVPEDRKKDGIVPVMAVGKN ITLAALSQFSGALSSLDDAAEQQCILQSLARLKVKTSSPELAIGRLSGGNQQKAILARCL LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE GKLKANLNNQNLTQEQVMEAALRSERHVEKQPV >gi|333596726|gb|GL892086.1| GENE 50 66811 - 67992 1471 393 aa, chain + ## HITS:1 COG:ECs4451 KEGG:ns NR:ns ## COG: ECs4451 COG4214 # Protein_GI_number: 15833705 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 559 93.0 1e-159 MSKSNPSDIKVAVPTPGAFAGLKSLNLQVFVMIAAIIVIMLFFTWMTDGSYLSARNVSNL LRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAIFDVWLGWPLPLTIAVTLVLG LLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSASMSQIGQSYLSDG VGFTIGVVGLMAFVAWQWRGRMRRQALGLASPASTSVVGRQALTAVIVLGAIWLLNDYRG VPTPVLLLALLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMV AIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGIGSVAGAVMGAFIMASLDNG MSMMDVPTFWQYIVKGAILLLAVWMDSATKRRA >gi|333596726|gb|GL892086.1| GENE 51 68027 - 69205 1173 392 aa, chain + ## HITS:1 COG:xylR_1 KEGG:ns NR:ns ## COG: xylR_1 COG1609 # Protein_GI_number: 16131440 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 265 1 265 265 497 90.0 1e-140 MFEKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRTRLENIKDWLGDGV IADFDDPVIEQLLSGVDVPIVGVGGSYHSPEHYPPVHYIATDNHALVETAFLHLKEKGVH RFAFYGLPATSGKRWAMEREYAFCQLVAQEKYRGVVYQGLETAPENWQHAQNRLADWLQT LPPQTGIIAVTDARARHVLQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR QMGYQAAKLLHRLLDKESLPLQRLLVPPVRVVERRSTDYRSLNDPAVIQAMHYIRNHACK GIKVDQVLDSVGISRSNLEKRFKEEVGETIHAVIHAEKLEKARSLLISTSLSINEISQMC GYPSLQYFYSVFRKEYDTTPKEYRERYSEVLL >gi|333596726|gb|GL892086.1| GENE 52 69241 - 69813 627 190 aa, chain - ## HITS:1 COG:STM3663 KEGG:ns NR:ns ## COG: STM3663 COG2992 # Protein_GI_number: 16766948 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Salmonella typhimurium LT2 # 1 190 85 274 274 327 90.0 7e-90 MPYIKSQNAAITADRNWLISKQYDSRWSPSERTRLKDIAKRYKVKWSGNTRRVPWNSLLE RVDIIPGSMVATMAAAESGWGTSKLARNNNNLFGMKCAKGRCTNAPGKVKGYSQFESVKD SVNAYVVNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTQGQRYNNYLFSMYQ DNQRLIAAHM >gi|333596726|gb|GL892086.1| GENE 53 70380 - 72410 2305 676 aa, chain + ## HITS:1 COG:ECs4454 KEGG:ns NR:ns ## COG: ECs4454 COG0366 # Protein_GI_number: 15833708 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 676 1 676 676 1122 79.0 0 MKRTALAVLMLPALAHADWSSPGFDAFNAEGTGVFTSQARLAKGTRPLTLSLDNACWQPT DAIKLNEMLSLKPCEGTPPQWRLFRDGVYQMRIDTRSGTPTLMLTVNSAAPQPVANVTRQ CPKWDGQPLTIDVVNTFPEGTVVRDFYSKQTATVQNGKVTLQPAANSNGLLLLERAETDK PAPFSWQNATVYFVLTDRFVNGDPTNDNSYGRHKDGMQEIGTFHGGDLKGLTSKLDYLQQ LGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTQDWTKLDANMGNEEDLRQLVDEA HRRGIRVLFDVVMNHAGYATLADMQEYQFGALYLQGDELKKILGERWTDWKPGAGQSWHS FNDYINFSDKAAWEKWWGKKWIRTDIGDYDNPGFDDLTMSLAFLPDLKTESKIPSGLPNF YQHKPDTNAKVMTNFTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVEPEAWQQLKNQASQA LAAWKAANPDKKLDDAPFWMTGESWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAD MDLTWQQMAEKLQSFNVLSYLSSHDTRLFREGGQRAAELMLLAPGSVQIYYGDESERPFG PTGSDPLQGTRSDMNWQDVTGKQALTVAHWQLLGQFRARHPAVGEGKQTTLSMKEGYGFV REHKGDKVMVVWAGNQ >gi|333596726|gb|GL892086.1| GENE 54 72716 - 73969 1467 417 aa, chain + ## HITS:1 COG:ECs4455 KEGG:ns NR:ns ## COG: ECs4455 COG3977 # Protein_GI_number: 15833709 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Escherichia coli O157:H7 # 1 416 1 416 417 813 92.0 0 MTFSQFGDKFTRHSGITRLMEDLNDGLRTPGAIMLGGGNPAQIPEMNTYFQTLLADMLEN GKATDALCNYDGPQGKTELLTLLAAMLREALGWDIEPQNIALTNGSQSAFFYLFNLFAGR RADGTTKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEET GMICVSRPTNPTGNVITDDELMKLDALANQHDIPLVIDNAYGVPFPGIIFSEARPLWNPN IVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLSPGGIGPAMMCEMIRRNDLLR LSNEVIKPFYSQRVQETIAILRRYLPEERCLIHKPEGAIFLWLWFKDLPVTTELLYQRLK KRGVLMVPGDYFFPGLDKPWPHTHQCMRMNYVPDPEKIEAGVKILAEEIENAWREAG >gi|333596726|gb|GL892086.1| GENE 55 73977 - 74432 104 151 aa, chain - ## HITS:1 COG:STM3666 KEGG:ns NR:ns ## COG: STM3666 COG1142 # Protein_GI_number: 16766951 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Salmonella typhimurium LT2 # 1 147 1 152 157 162 63.0 2e-40 MNQFIMADSEKCIGCRTCEVACILSHQNDATPGAVTSRIRVVKGDTFTTTVGCHQCEDAP CANVCPTQAIHRTAGAWLVEQARCIGCKSCMVACPFGAMQVRLVEDRVQALKCDLCVHRE GGPACVEACPTHALRCIDPARLRAERLRNLA >gi|333596726|gb|GL892086.1| GENE 56 74526 - 75344 261 272 aa, chain - ## HITS:1 COG:STM3678 KEGG:ns NR:ns ## COG: STM3678 COG2207 # Protein_GI_number: 16766963 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 401 71.0 1e-112 MLELSIALPIKVQNGGLFISRGVGRHPARKLSSWEIIFVEKGTLTIQEENTLFEVNAGES LLLWPKRRHVGVDDFPGDLKFYWLHFEVDERLPALPGASPLSIEQHCSVRDPQYVIALFR QFLSEQEKLQRSQALEIILLLILQQISLSPGYEDKADDAGAAMAWKAKQLIRTHFHLPIS TSQLAKELHCNADYLGRVFRRTFHLTLTEAIHRQRVRAAEKLLLNDAASLTEVAARCGFN DVGYFRQIFSKHTGLTPAVWKRRYCKEHINSG >gi|333596726|gb|GL892086.1| GENE 57 75569 - 76969 1516 466 aa, chain + ## HITS:1 COG:ECs4458 KEGG:ns NR:ns ## COG: ECs4458 COG2211 # Protein_GI_number: 15833712 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 465 1 465 466 758 90.0 0 MTSTPITDAEVAKQVADDRLSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPAL VGTLFIALRVFDAVSDPVMGVIADRTQSRWGRFRPWQLWVALPIGIIGVLTFTVPDASMG VKIAWAFGTYLLLSVGYTAINVPYCALINTMTTRHNEVISCQSWRFVLCGVAGFLVSVGL PWLVAALGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLALMGKFTLREHLAGLR KNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSAAYTSLFFTMVTFAAILGAVIVN PLSRRMDTVKLYYYTNLVLAALAVGMWFLPGGPAHQTLWLIVILSNGVILGFTLPLHFSL MAFADDYGEWKTGVRSSGMNFAFNLFFIKLAWASSAGIISLVFIAVAYQPGAGNQTPASL QGITAMETLLPALFHLLLAVAIRWCRLNNPVMSRIATDLRQRHVQS >gi|333596726|gb|GL892086.1| GENE 58 76980 - 78929 1905 649 aa, chain + ## HITS:1 COG:STM3679 KEGG:ns NR:ns ## COG: STM3679 COG3533 # Protein_GI_number: 16766964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 648 1 650 651 1139 80.0 0 MTIMEADLHQLKINDPFLGQYQRLVRDVVIPYQWEALNDRVAEAEPSHAIANFRIAAGLE QGEFYGMVFQDSDVAKWLEAVAWSLCQKLDAELEKTADEVIELVAAAQCEDGYLNTYFTV KAPEERWTNLAECHELYCAGHMIEAGVAYFQGTGKRRLLDVVCRLADHIDGVFGPGETQL HCYPGHPEIELALMRLYDVTQEPRYLNMVKYFIEERGAQPHFYDIEYEKRGKTSYWNTYG PAWMVKDKAYSQAHQTLAEQQTAIGHAVRFVYLMAGMAHLARLSNDEGKRQDCLRLWNNM AQRQLYITGGIGSQSSGEAFSSDYDLPNDTVYAESCASIGLMMFARRMLEMEADGHYADV MERALYNTVLGGMALDGKHFFYVNPLEVHPKTLAFNHIYDHVKPVRQRWFGCACCPPNIA RVLTSLGHYIYTVRPDALLINLYVGNDVAIPVGDNILQLRISGNYPWHEQVKIEITSPVP VTHTLALRLPDWCAEPAVSLNGEAITGEVSRGYLYLNRSWQEGDTLSLTLPMPVRRVYGN PQVRQQAGKVALQRGPLVYCLEEADNGANLHNLSLPQDSAFRVFEGKGIFAHKMLIQAEG IGYQAKDTNALWQYDRSPVERQPRTLTFIPWFSWANRGEGEMRIWVDEG >gi|333596726|gb|GL892086.1| GENE 59 79029 - 80567 1844 512 aa, chain - ## HITS:1 COG:STM3680 KEGG:ns NR:ns ## COG: STM3680 COG1012 # Protein_GI_number: 16766965 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 512 1 512 512 1036 95.0 0 MTNNPPSSRIQPGEYGFPLKLKPRYDNFIGGDWVAPVDGEYYSNLTPVTGQPLCEIASSG KRDIDLALDAAHKAKDKWGQTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETM AADVPLAIDHFRYFASCIRAQEGGISEVDKDTVAYHFHEPLGVVGQIIPWNFPLLMASWK MAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVINVVNGAGGEIGEYLATSKRIA KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFA FNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDNVTQMGAQVSHGQLETILN YIDIGKKEGADVLTGGRRKVLGGDLQEGYYLEPTILFGKNNMRVFQEEIFGPVLAVTTFK TMDEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF >gi|333596726|gb|GL892086.1| GENE 60 80734 - 81618 327 294 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 3 289 4 316 323 130 29 2e-28 MQLFIGFDVGGTHIKHGVINENGEELTSDEYDTPDDESTFKQKWKTVVDKYRQEYEIVGI GVSFPGHINHHTGEAAKAGALDYLDGENLCELFAQLTDLPVTAENDANCAALGERWQGAG KDYEHFVCITIGTGIGGGIVMEGDLYRGSHYRAGEFGVLPVGNNGEPMHEVASASGLMKA CRRALAVSEEEMPDGEELFKRMDSDVHLREAIEEWAHFLSRGIYSVISMFDPQAVLIGGG ISEQEKIYLLLDKYLQRFEEWEALRVPILPCELGNQAGRLGAVWLAKQKQARSA >gi|333596726|gb|GL892086.1| GENE 61 81622 - 83460 1861 612 aa, chain - ## HITS:1 COG:selB KEGG:ns NR:ns ## COG: selB COG3276 # Protein_GI_number: 16131461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli K12 # 1 612 1 612 614 1034 84.0 0 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVLGFIDVPG HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPQLTVALTKADRVDEA RINEVRAEVLAALAEYGFEDAALFVTVATEGRGIDALREHLQQIPSREQASHHRFRLAID RAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNTSMRVRGLHAQNQPVERAYAGQRIALN IVGDAEKDQLNRGDWLLADAPPEPSERIIVSLQTHTPLTQWQPLHIHHAASHITGRVSLL ENDLAELVFDSPLWLADNDRLVLRDISARETLAGARVVMLDPPRRGKRKPEYLQWLAALA KASDDRSALDIHLERGAVDLAAFAWARQLSGEGLRLLTQEPGFIQAGNRLLNAPVAARWQ RKVLSTLATYHEQHQDEPGPGRERLRRMALPMEDDALVLLLIENMRESGVINSHHGWLHL PEHKAGFTAEQDAVWQKVAALFGDEPWWVRDLARETHTDEQLMRQVLRHAAQQGMIVAIV KDRYYRNDRIVAFANLIRELDQARGSTCAADFRDRLNVGRKLAIQILEYFNRIGFTRRRG NDHVLRDAQLFP >gi|333596726|gb|GL892086.1| GENE 62 83457 - 84842 1273 461 aa, chain - ## HITS:1 COG:STM3683 KEGG:ns NR:ns ## COG: STM3683 COG1921 # Protein_GI_number: 16766968 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 6 461 7 463 463 677 79.0 0 MTTHHSLYSQIPATDRLLRDPRITAVLEQFGHTATVDMLRQLQDDARRHIQAENAIPGWC VAWAQEAERRLSKHAQSALRPVINLTGTVLHTNLGRAQQAEEAIEAVTQAMRSPVTLEYD LDGAGRGHRDRALADLLCQITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIG GAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRAAVNENTALLMKVHTSNYHIEGFTKTVEE ADLAAIGRELNVPVIADLGSGSLVDMRQFGLPKEPMVQEMIAAGVSLVSFSGDKLLGGPQ AGIIVGRRELIAQLQQHPLKRALRADKMTLAALEATLRLYLHPEKLADRLPTLRLLSRDA ASIRAQAEALLPQVAPHYPEFDVRIEPCLSQIGSGSLPVDRLPSEALTFTPRDGRGSQLE ALSARWRALPTPVIGRIGDGRMWLDLRCLEDEMRFLEMMLK >gi|333596726|gb|GL892086.1| GENE 63 84946 - 85554 717 202 aa, chain - ## HITS:1 COG:STM3684 KEGG:ns NR:ns ## COG: STM3684 COG0625 # Protein_GI_number: 16766969 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 202 1 202 202 325 79.0 3e-89 MKLIGSYTSPFVRKISILLLEKGIEFEFVNEQPYNAENGVAQYNPLGKVPALVTDEGDYW FDSPIIAEYIELLGVAPAMLPTEPKAALAMKQIEALTDGIMDAALTSVREQARPAAQQSE NELLRQREKISRSLDRCEQLIRDGKIQSDSLNLATIAIACAIGYLNFRRVSPGWCVDRPL LVKLAETLFQRESFARTEPPKA >gi|333596726|gb|GL892086.1| GENE 64 85644 - 86780 1365 378 aa, chain - ## HITS:1 COG:ECs4473 KEGG:ns NR:ns ## COG: ECs4473 COG1566 # Protein_GI_number: 15833727 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 656 87.0 0 MDLLIILTYVAFAWAIFKIFRIPVNQWTLATASLGGIFIVAGLILLMNYNHPYTFTAQKA VISIPITPQVTGVVSEVTHKNNQLIKKGEVLFKLDPGKYQARVDRLKADLVTATHNIDVL KAQLSEAQANTTRVSAERDRLYKDYQRYVKGSRAKVNPFSESDIDNARQNYLAQDALVKG SVAEQTQIQSQLDSMVNGEQSQIASLRAQLAEATYNLEQTVVRAPGNGYVTQVLIRPGTY AAALPLRPVMVFIPEQKRQIIAQFRQNSLLRLKPGDEAEVVFNALPGRVFSGKLTSILPV VPGGTYQAQGVLQSLTVAPGTDGVQALIELEPNADVDALPDGIYAQVAVYSDHFAHVSVM RKVLLRMTSWMHYLYLDH >gi|333596726|gb|GL892086.1| GENE 65 86783 - 87139 394 118 aa, chain - ## HITS:1 COG:no KEGG:ECL_00172 NR:ns ## KEGG: ECL_00172 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 118 1 118 118 206 88.0 2e-52 MFLNYFALGILIFVFLVLFYGIIAIHDIPYNMAKKRNHPHADAIHTAGWISLFTLHAIWP FLWIWATLYREDRGWGMQNHIQPSDRPYDVDALAKRVTELEQKLAAVQPVVDKNTLER >gi|333596726|gb|GL892086.1| GENE 66 87804 - 89711 2632 635 aa, chain + ## HITS:1 COG:ECs4475_1 KEGG:ns NR:ns ## COG: ECs4475_1 COG2213 # Protein_GI_number: 15833729 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 872 93.0 0 MSSDFKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLL PLLIGYTGGRLVGGDRGGVVGAITTMGVIVGADMPMFLGAMIAGPLGGWAIKKFDVWVDG KIKSGFEMLVNNFSAGIIGMILAILAFLGIGPAVEVLSKLLAAGVNFMVAHDMLPLASIF VEPAKILFLNNAINHGIFSPLGIQQSHDLGKSIFFLIEANPGPGMGVLLAYMFFGRGSAK QSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLSVLGGGLVSPASPGSI LAVLAMTPKGAYFANIAAICAAMAVSFVVSAILLKTSKVKEDDDIEAATRRMHDMKAESK GATPLAAGDVSNDLSHVRKIIVACDAGMGSSAMGAGVLRKKVQDAGLTNISVTNSAINSL PPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYSSLTERLVAAQRHEDNEVKVRT SLQDSFDESNAHLFKLGAENIFLGRTATNKEEAIRFAGEQLVKGGYVQPEYVDAMLEREK LTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPDGVRFGEEEDDIARLVIGIAARNNEH IQVITSLTNALDDETVIERLANTTSVEEVLALLNK >gi|333596726|gb|GL892086.1| GENE 67 89814 - 90962 1481 382 aa, chain + ## HITS:1 COG:STM3686 KEGG:ns NR:ns ## COG: STM3686 COG0246 # Protein_GI_number: 16766971 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 382 1 382 382 684 93.0 0 MKALHFGAGNIGRGFIGKLLADAGITLTFADVNQVVLDALNARHSYQVHVVGENEQVETV SGVNAVSSIGDDVIDLIANVDLVTTAVGPVVLERIAPAVAKGLAKRKAQGVDAPLNIIAC ENMVRGTTQLKGHVLAAVADEDKAWVEAHVGFVDSAVDRIVPPSESATNDPLEVTVETFS EWIVDKTQFKGALPTIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL DENIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRK LSAGDRLIKPLLGTLEYGLPHANLVKGIAAAMHYRSEQDPQAIELAQLIDDKGAQAALAQ ISGLDANSDVVAEAVSAYNATK >gi|333596726|gb|GL892086.1| GENE 68 91025 - 91549 505 174 aa, chain + ## HITS:1 COG:STM3687 KEGG:ns NR:ns ## COG: STM3687 COG3722 # Protein_GI_number: 16766972 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 174 23 196 196 305 92.0 4e-83 MEQTQAFENRVLERLNAGKTVRSFLIAAVELLTEAVNILVLQVFRKDDYAVKYAVEPLLD GDGPLGDLSVRLKLIYGLGVLNRQEYEDAELLMALREELNHDGNEYTFTDDEILGPFGEL HCVSALPPAPTFDNSDPELYAMQKLRYQQVVRSTMVLSLTELISKISLKKAFQK >gi|333596726|gb|GL892086.1| GENE 69 91608 - 91970 567 120 aa, chain + ## HITS:1 COG:no KEGG:CKO_05058 NR:ns ## KEGG: CKO_05058 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 120 1 120 120 154 86.0 8e-37 MKEVEKNEIKRLSDRLDLIRHQMAGLSLVDSAEKYAELEKESVKLEAEIERLRDVKGQKL SKEAQKLMNMPHRRAITKKEQADMGKLKKSVRGLVVVHPMTELGREMGLKEMTGFCKTAF >gi|333596726|gb|GL892086.1| GENE 70 92238 - 93026 389 262 aa, chain + ## HITS:1 COG:MA3490 KEGG:ns NR:ns ## COG: MA3490 COG1112 # Protein_GI_number: 20092301 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Methanosarcina acetivorans str.C2A # 18 261 13 265 1939 111 31.0 1e-24 MNSTESSTFQNSALSLEQKLEKARAELLDLGARNRLLNIPRSKNTRFLEVIDERSELVYK LLFNEKKTFTFLHGKSGKEDGLESEDSLSEEKYFIYQFDETDTEIKSQHLDTKLQTRLTP KGLQTRLLDLYHDAKTLEEEQGANILFLALGTLKWVDPANKENIRYAPLILVPVSLERGS AGERFKLKARSEDIIPNLSLEAFLERVHQITLPVMQSDDDEINISGYFDSVQQAIALKSD WEVIPNDIILGLFSFSKFLMYC >gi|333596726|gb|GL892086.1| GENE 71 94129 - 94431 66 100 aa, chain + ## HITS:1 COG:no KEGG:ECL_00163 NR:ns ## KEGG: ECL_00163 # Name: not_defined # Def: putative superfamily I DNA and RNA helicase protein # Organism: E.cloacae # Pathway: not_defined # 2 90 387 475 483 124 73.0 1e-27 MIQLRNRQNVISTGLRKPELIAPKEIASGAMQIVRASLGATEDEIITAVSRMLGFKSTSS VLKRVISDTIEQQIKDKHLKQHDGLILIDEPHVDSIRNVV >gi|333596726|gb|GL892086.1| GENE 72 94570 - 95664 814 364 aa, chain - ## HITS:1 COG:no KEGG:Pvag_pPag30168 NR:ns ## KEGG: Pvag_pPag30168 # Name: not_defined # Def: long polar fimbria protein A # Organism: P.vagans # Pathway: not_defined # 50 364 46 369 369 182 39.0 2e-44 MRRFIHWFFYLSLLSLFGMLSFHVHAQTSPCHTTRDQWVVQVPYAIGYAPGTADWTPISA PIQSTGADFYSCDGGNDAWRSIGFVDMDNPVGTVVGEDGASRHVYKTQIDGIGYALGFRE QQYCGADAIRYIDGTSQMNGNESRRICDASQNPAFASASTYKMQFWVVFYKIPTTSAMPD DNANSQEQNVGSLILQAGENQASATNVATPVQIHLASFTVRRTSCSVGSRSILVPMGSVS QREFHGTGSRAGGGRFSIPVTCENNTAVKMGFFGDTTPANDRALALTKQEDSASGVGIEL LYGDNTGSVQGQVVQWNTPQVSALGQVGDNQTQTFWFDAHYIQTEENVTAGKADAMATFN LIYN >gi|333596726|gb|GL892086.1| GENE 73 95674 - 98154 2148 826 aa, chain - ## HITS:1 COG:Z4968m KEGG:ns NR:ns ## COG: Z4968m COG3188 # Protein_GI_number: 15804998 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 EDL933 # 28 826 33 857 857 570 41.0 1e-162 MLFRLFRYAPLSVLLLSFSRAGIAEDYFDPAALELSSTEQKTADLHYFSEKGGQMPGTWL VTLEINGREERHQEITFVNEKGSLQPVFSVSLLETLGVNVRAIPAFSRLQEGETFTHLAD FIPAARTSYDFSQQRLFLSLPQAAMKHRSRGYVPQSRWDDGIPAAFTDYSLSGGQARHQS GVTTSSYLSLRNGINLGAWRLRNTSAWSHSDAGGDHFQSQSSWLTRDIRRLNSQLRLGDA WTAGDVFDSVAFRGVQLSSSESMLPDSQRGFAPTIRGVAHSFAKVSVSQNGYVIYETWVA AGPFIINDLFPGAQSGDLQVTVTESDGSTRVFTQPYSAVPFMRRQGSLKYSLNAGRFHSG SGDARSPEFVEGAFFYGLLSRMTVYGGFRTANNYQAGAIGVGRGFGAFGSLGIDDTLAKS RLPNGKSAMGQAWRIQYQKDFSATGTAFSLASYRYASRNYYEFGELNQSDSQQLQLNNRR SRSQVTFSQTLGQFGSLSVSAWMQDYWHTSGQDKTIHIGWYTSWRGISWGAGYDYTDSAL EQHPDRTVSFNVNVPLGHWLPDSSVSYFINHNNRGMTTQQVSLNGSALANRNLIYSVQQS QASEGQADSTSLALQYNGGYGNVSLGYDHSRSGSNASLGLAGGVIATQYGITLSQPLGDT VALIRVPGAANVEPEGYNGIHTNSRGYAVMPTLSAYRKNTVSLDTATLGENVDVEQSGLT LIPTSGAVVLANYKTHIGYRVLFSLRYHGEPLPFGAQAEVVEQNRRSANRSMVADGGQAY LSGVPERGTLRVTWYEDGEQQQCQTPFRLGKAHMAPGIATLSVECH >gi|333596726|gb|GL892086.1| GENE 74 98159 - 98830 348 223 aa, chain - ## HITS:1 COG:ECs4021 KEGG:ns NR:ns ## COG: ECs4021 COG3121 # Protein_GI_number: 15833275 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 223 1 230 231 167 40.0 2e-41 MKRLSYIMLTALMVSSASVSAGVVMGGTRIVYPQHSKEVAFSVSNMESAVPYLIQSWVEG DGQDKNNAAPFIVTPPLFRLDPEQTNTLRIQYTGTPLPTDRESVFWLDIKAIAPKPKEST NELQVNVKSKFKIFYRPDNLKGDAATAWQKITFSRTGKRLKAANPTPYYVSFYRLTVGGH KIEQPGMIGPGETREWPVSASGGVSWSAINDFGAITATHSQPL >gi|333596726|gb|GL892086.1| GENE 75 98864 - 99445 558 193 aa, chain - ## HITS:1 COG:STM0026 KEGG:ns NR:ns ## COG: STM0026 COG3539 # Protein_GI_number: 16763416 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 34 192 12 171 172 75 30.0 5e-14 MKIKNVALAIAAAGILLSSQSVLASSDSGVNTSLDAGAGSQSTGGVINFTGKITLISCDI TPASKNKTVDLGAWAKNYFDEHVETTPREFKINVENCPPAVESVAVLFDGNKDSDDATLL QVTPGTGMATGVGVKLYNSDRSTAIKPGTVSKTTAPDEEGNAELTFYAALDKDGTEINAG DVNAVSNFLMVYN >gi|333596726|gb|GL892086.1| GENE 76 100544 - 102199 2266 551 aa, chain + ## HITS:1 COG:STM3692 KEGG:ns NR:ns ## COG: STM3692 COG1620 # Protein_GI_number: 16766977 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Salmonella typhimurium LT2 # 1 551 1 551 551 907 93.0 0 MSLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYLAATYTVAIALLVALFFYKM PVDRALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFSFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIVNTAPVAFGAMGIPILVA GQVTGLDSFEIGQMVGRQLPFLTIIVLFWIMAIMDGWRGVKETWPAVMVAGGSFAIAQYL SSNFLGPELPDIISSLVSLVCLTLFLKRWQPVRIFRFADMGASHVDQTLARTGYTAGQIV RAWSPFLFLTATVTLWSIPPFKALFAPGGALYDMVINISVPFLDKMVARMPPVVHDATPY AAVFKFDWFSATGTAILFAAILSVVWLRMKPAVAVQTFAATIKELMLPIYSIGMVLAFAF ISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGV SDVLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITT LQAYVLTWMIP >gi|333596726|gb|GL892086.1| GENE 77 102196 - 102969 924 257 aa, chain + ## HITS:1 COG:STM3693 KEGG:ns NR:ns ## COG: STM3693 COG2186 # Protein_GI_number: 16766978 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 257 1 258 258 410 85.0 1e-114 MIVMPRRLSDEIATRVRALIEEQQLEAGMRLPAERQLAAQLGVSRNSLREALATLVSEGV LLSRRGGGTFVRWQHDDWSEQNIVQPLKTLMENDPDYSFDILEARHAIETSTAWHAAMRA TDADKEKLKACFEATQSSDPDIASQADVRFHLAIAEASHNVVLLQTMRGFFDLLQSSVKQ SRQRMYLVPPVFAQLTEQHEAVLNAILAGDAEAARKAMMAHLGFVHTTIKRFDEDQARQA RITRLPGESDISRENKA >gi|333596726|gb|GL892086.1| GENE 78 102966 - 104153 1551 395 aa, chain + ## HITS:1 COG:lldD KEGG:ns NR:ns ## COG: lldD COG1304 # Protein_GI_number: 16131476 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli K12 # 1 395 1 396 396 740 94.0 0 MIISAASDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSL ETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTI KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALR RYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWI REFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD IAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATSGQAGVANLLNLIEKEMKVAMT LTGAKSISEISKDSLVQELSKLPAALAPLSQGNAA >gi|333596726|gb|GL892086.1| GENE 79 104334 - 105674 1448 446 aa, chain + ## HITS:1 COG:PA0235 KEGG:ns NR:ns ## COG: PA0235 COG0477 # Protein_GI_number: 15595432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 6 416 11 421 448 320 45.0 4e-87 MAYSGRVDIQQVIDESPFSGFHWLLIVLGFLVLAIDGFDTAAMGYIAPTLSAEWGIHKQD LGPVLSAALLGLSLGALIAGPVSDRMGRKRVLVFSCLFFGLASLGTAWAQSLNTLTLWRF LTGLGLGAAMPNAITLISEFAPQRCRAMAINTMYCGFPLGAAGGGAISSWLIPHHGWRSV LLTGAIAPLILTVLLALLLPESVKFLVQRGKDLAQVRRIASRFARSTLDSVTGFFLVEDK VASKKGSVAQLFSMPWLPGTLMLWVTYFMGLVIYYVLLSWMPTLMQGMGYALAESAWLTS LFTFGGTAGILLAGWMMDRWEAHKVVACGFVLTMGLILLLGIEHNHIALFGGLIFLMGIA MNGAQSGMQTLAATFYPTECRATGIAWMQGIGRFGGVAGTMTSAQLLAMQWQADSILMIL SVPALVAAAATVYKMLYSRSQEPGVA >gi|333596726|gb|GL892086.1| GENE 80 105721 - 106194 549 157 aa, chain + ## HITS:1 COG:STM3695 KEGG:ns NR:ns ## COG: STM3695 COG0219 # Protein_GI_number: 16766980 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 310 94.0 7e-85 MLNIVLFEPEIPPNTGNIIRLCANTGFRLHIIEPMGFTWDDKRLRRAGLDYHEFTAVVRH HDYAAFLEAEKPQRMFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPATILDALPAEQKI RIPMMPDSRSMNLSNAVSVVVYEAWRQLGYPGAILRS >gi|333596726|gb|GL892086.1| GENE 81 106233 - 107708 2117 491 aa, chain - ## HITS:1 COG:ilvC KEGG:ns NR:ns ## COG: ilvC COG0059 # Protein_GI_number: 16131632 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Escherichia coli K12 # 1 491 1 491 491 936 96.0 0 MANYFNTLNLRQQLAQLGKCRFMARDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSG LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVVNLTPDKQHSDVVRSVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAFALSEQLKTIMAPLF QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYDGKITEQEYFDKGVL MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFSYACVPLLKEFMTTLQAGDLGQAIAEGAVDNAQLRDVNEAIRSHEIEKVGQKLRGY MTDMKRIAVAG >gi|333596726|gb|GL892086.1| GENE 82 107861 - 108751 861 296 aa, chain + ## HITS:1 COG:ilvY KEGG:ns NR:ns ## COG: ilvY COG0583 # Protein_GI_number: 16131631 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 296 1 296 297 553 97.0 1e-157 MDLRDLKMFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA GEELRIFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ ISVEKPDWSTVPFIMADQGPVRRRIELWFRRQKISNPSIYATVGGHEAMVSMVALGCGVA LLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIDAFWKILPNH >gi|333596726|gb|GL892086.1| GENE 83 108797 - 110341 2027 514 aa, chain - ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 967 95.0 0 MAESQPLSAAPEGAEYLRAVLRAPVYEAVQVTPLQKMDKLSSRLDNVILVKREDRQPVHS FKLRGAYAMMAGLTDEQKARGVITASAGNHAQGVAFSSARLGLKALIVMPVATADIKVDA VRGFGGEVLLHGANFDEAKAKAIELAQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHL DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE GVAVKRIGDETFRLCQEYLDDIVTVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI AQHNIRGERLAHVLSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG GRSVTEFNYRFADAKDACIFVGVRLSRGVEERKEILSLLHDGGYSVVDLSDDEMAKLHVR YMVGGRPSKPLRERLFSFEFPESPGALLKFLHTLGTHWNISLFHYRSHGTDYGRVLAAFE LGEHEPDFETRLNELGYECHDETHNPAFRFFLAG >gi|333596726|gb|GL892086.1| GENE 84 110344 - 112194 2459 616 aa, chain - ## HITS:1 COG:ECs4705 KEGG:ns NR:ns ## COG: ECs4705 COG0129 # Protein_GI_number: 15833959 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1171 95.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV AEQIEASGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDKIIKLDLVDAMIQGADPKVSDEQ SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQDDASALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSD IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPES LDQYDVMLTKDDAVKKMFRAGPAGIRTTQAFSQDCRWDTLDDDRAEGCIRSLEHAYSKDG GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDEAVDAILGGKVVEGDVVVIRY EGPKGGPGMQEMLYPTTFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGNIAI IEDGDLIEIDIPNRGIQLKLSDQEIAARREAQETRGDKAWTPKDRQREVSFALRAYASLA TSADKGAVRDKSKLGG >gi|333596726|gb|GL892086.1| GENE 85 112255 - 113184 1172 309 aa, chain - ## HITS:1 COG:ECs4704 KEGG:ns NR:ns ## COG: ECs4704 COG0115 # Protein_GI_number: 15833958 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 632 96.0 0 MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQR LHDSAKIYRFPVSQSVDELMEACRDVIRKNNLTSAYIRPLVFVGDVGMGVNPPEGYTTDV IIAAFPWGAYLGAEALDQGIDAMVSSWNRVAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVNGYISEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAKDLGIEVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDK YGWLDQVNH >gi|333596726|gb|GL892086.1| GENE 86 113203 - 113466 151 87 aa, chain - ## HITS:1 COG:ECs4703 KEGG:ns NR:ns ## COG: ECs4703 COG3978 # Protein_GI_number: 15833957 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 130 88.0 6e-31 MMQHQVAVQARFNPETLERVLRVVRHRGFQICSMNMETATDAQNISIELTVASPRPVDLL FSQLSKLVDVAHVAICQSTTTSQQIRA >gi|333596726|gb|GL892086.1| GENE 87 113463 - 115109 1735 548 aa, chain - ## HITS:1 COG:STM3901 KEGG:ns NR:ns ## COG: STM3901 COG0028 # Protein_GI_number: 16767177 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Salmonella typhimurium LT2 # 1 548 1 548 548 1024 91.0 0 MNGAQWVVHALRAQGVETVFGYPGGAIMPIYDALYDGGVEHLLCRHEQGAAMAAIGYARA TGKTGVCMATSGPGATNLITGLADALLDSVPVVAITGQVASPFIGTDAFQEVDVLGLSLA CTKHSFLVQSLEELPRVMAEAFEVASSGRPGPVLVDIPKDIQVALGDLEPHFSTVESDDA FPHAEVEEARQMIAQAKQPMLYVGGGVGMAQAVPALRAFIATTQMPATCTLKGLGAVEAD YPYYLGMLGMHGTKAANLAVQACDLLIAVGARFDDRVTGKLNTFAPNAKVIHMDIDPAEM NKLRQAHVALQGDLNALLPALEQPLDISAWRQHTADMRAEHAWRYDHPGEAIYAPLLLKQ LSDRKPADSVVTTDVGQHQMWSAQHMTYTRPENFITSSGLGTMGFGLPAAVGAQVARPND TVICISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTD NPDFLTLASAFGIPGQHITRKDQVEAALDTMLSSEGPYLLHVSIDELENVWPLVPPGASN SQMLEKLS >gi|333596726|gb|GL892086.1| GENE 88 115689 - 117209 734 506 aa, chain + ## HITS:1 COG:ECs4700 KEGG:ns NR:ns ## COG: ECs4700 COG0606 # Protein_GI_number: 15833954 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Escherichia coli O157:H7 # 1 505 11 515 516 769 77.0 0 MSLSVVYTRAAIGVKAPLISVEVHLSNGLPGLTLVGLPETTVKEARDRVRSAIINSGYAF PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLKTPGLSSCEFVGELALTGALRGVP GAISGALEAIRAGRQIIVANENASEVSLIAEKGCLVAGHLQEVCAWLEGRHELAEPQEND EVAPDSPDDLSDIMGQDQGKRALEITAAGGHNLLLIGPPGTGKTMLASRLNGLLPPLNNH EALESAAIFSLVSSTSLHKQWRRRPFRSPHHSASLTAMVGGGSIPGPGEISLAHNGILFL DELPEFERRVLDALREPIESGEIHLSRTRAKISYPAQFQLVAAMNPSPTGHYQGNHNRCT PEQTLRYLSKLSGPFLDRFDLSLEIPLPPPGLLRQAGMKGESSAAVRERVIAAQARQYAR QNRLNARLDNAGIRQFCSLNAEDAGWLEETLTRFGLSIRAWQRLLKVARTVADVEGCPGI ERRHLQEALSYRAIDRLLLHLQKMLA >gi|333596726|gb|GL892086.1| GENE 89 117238 - 117576 400 112 aa, chain - ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 190 89.0 5e-49 MAESFTTTNRFFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPATEDEKQF VSVCRGEREPQSDAERVWIKYMARIKRPKRFHTLSGGKPQMEGAEDYTESDD >gi|333596726|gb|GL892086.1| GENE 90 117683 - 118516 316 277 aa, chain + ## HITS:1 COG:STM3897 KEGG:ns NR:ns ## COG: STM3897 COG0583 # Protein_GI_number: 16767173 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 277 1 280 282 440 83.0 1e-123 MEKDVDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLENQLGVNLFTRHRNNIR LTPAGEKLLPYAETLMNTWQAARKEVAHTSRHNEFSIGASASLWECMLSQWLMRLYRTHN HLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQIVGQFSLALYASEPAMMKAD LNYLRLEWGPDFQQHETGLIASDDIPQLTTSSAEIACQHLPALKGCTWLPVRWADNKPAL HVVTDSTTLSRPLYAIWLQNSDKQSQIKDLLKTSILD >gi|333596726|gb|GL892086.1| GENE 91 122896 - 123747 820 283 aa, chain - ## HITS:1 COG:STM4131 KEGG:ns NR:ns ## COG: STM4131 COG0796 # Protein_GI_number: 16767395 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Salmonella typhimurium LT2 # 1 281 1 281 283 491 90.0 1e-139 MATKLQDGNTPCLAATPSDPRPTVLVFDSGVGGLSVYDEIRQLLPNLHYIYAFDNVAFPY GEKSEDFIVERVVEIVTAVQKRYPLALAVIACNTASTVSLPALREKFPFPVVGVVPAIKP AARLTANGIVGLLATRGTVKRPYTRELIERFANECQIAMLGSAELVEMAEAKLHGETVSL EELRRILRPWLRMQEPPDTVVLGCTHFPLLQEELLKVLPEGTRLVDSGAAIARRTAWLLE HEAPDAKSADANIAFCMAITKETEQLLPVLRRYGFETLEKLAL >gi|333596726|gb|GL892086.1| GENE 92 123692 - 125539 1710 615 aa, chain - ## HITS:1 COG:STM4130 KEGG:ns NR:ns ## COG: STM4130 COG4206 # Protein_GI_number: 16767394 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Salmonella typhimurium LT2 # 1 615 1 614 614 914 76.0 0 MIKKVSLLTALSVTAFSGWAQESADSLVVTANRFEQPEKSVLAATSVVTRADIDRWQSTT VLDVMRRLPGVDTAQNGGMGQLSSLFIRGTNSSHVLILVDGIRLNQAGVTGSSDLSQFPI SLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTTLNAGVGTHGFQNYGGSTQQTLG DSTRVTLAGDYTYTKGFDVVADGNNGGLAQTDRDGFMNKTLYGALEHAFSEQWSGFVRGY GYSNRTAYDGYYSSFSPDVLVDTRQLYSQTWDAGLRFNQDIFHSQLLSSYSHSKDYNYDP HLGRYDSTATLDEIKQYNVQWTNSVDVGHGNIGAGVDWQKQSTEPGTNYVTNAYDLRNTG VYLTGLQQFGDFTLEAAARSDDNSQFGRHGTWQSSAAWEFVDGYRFIASYGTAYKAPNLG QLYGFYGNAHLDPEESKQWEGAFEGLTAGVSWRVSGYRNDVDNLIDFNNNLQQYYNVGKA RIKGVEATASFDTGPLTHTVGYDYVDARNAATNQLLDRRAKQQVKYQLDTEIYDVDWSLT YHYLGTRYDTDFGTYPSEKVKMGGVSLWDVAVSYPVTSHLTVRGKIANLFDKDYETVYGY QTAGREYTLSGSYTF >gi|333596726|gb|GL892086.1| GENE 93 125567 - 125785 70 72 aa, chain + ## HITS:1 COG:no KEGG:ECL_05022 NR:ns ## KEGG: ECL_05022 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 72 1 72 72 130 97.0 1e-29 MPQASSIARDDETKCDVIPAGLRAGWRYTDEDFPFSQCLQLSSRQSLPLRVSSRFTLDSL FTLRRPETECYN >gi|333596726|gb|GL892086.1| GENE 94 125886 - 126986 1457 366 aa, chain + ## HITS:1 COG:ECs4896 KEGG:ns NR:ns ## COG: ECs4896 COG2265 # Protein_GI_number: 15834150 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 697 93.0 0 MTPEHLPTEQYDAQLAEKVVRLQSMMTPFNAPVPEVFRSPVSHYRMRAEFRIWHDGDDLY HIIFDQQTKSRIRVDSFPAASELINQLMTLMIDGVRNNPVLRNKLFQIDYLTTQSNQAIV SLLYHKALTDEWREQAEALRDALRAQNINVHLIGRATKTKIMLDQDYIDERLPVAGKEMV YRQVENSFTQPNAAMNVQMLEWALNATEGSTGDLLELYCGNGNFSLALARNFERVLATEI AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG VLLTAK >gi|333596726|gb|GL892086.1| GENE 95 127077 - 127436 380 119 aa, chain - ## HITS:1 COG:no KEGG:ECL_05024 NR:ns ## KEGG: ECL_05024 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 119 1 119 119 209 96.0 3e-53 MKQSGQDKGTLLLALIAGLSINGTFAAVFSSIVPFSIFPIIALVLTVYCLHQRYLNRTMP VGLPGLAAASFILGVLLYSTVVRAEYPDIGSNFLPAVLSVALVFWIGSRMRSRKSQLPE >gi|333596726|gb|GL892086.1| GENE 96 127446 - 128081 662 211 aa, chain - ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 206 20 225 234 344 98.0 5e-95 MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGL TMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAF RAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVSIEQRKQLE ERLVLQLRMISKGAYYWYRREQEKLAHQNDE >gi|333596726|gb|GL892086.1| GENE 97 128281 - 129681 434 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 171 27 9e-41 MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDHSRLLRSSFADILNHADTVINQQTRMRQGFYERNHCEILQGNAHFV DEHTLALECHDGSVETLTAEKFVIACGSRPYHPADVDFSHPRIYDSDSILSLHHEPRHVI IYGAGVIGCEYASIFRGMEVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLHLENIGLETDSRGQLKVNSMYQ TALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMSVGTLKILFHRETKEILGIHCFGERAAEI IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|333596726|gb|GL892086.1| GENE 98 129664 - 130581 1239 305 aa, chain - ## HITS:1 COG:STM4125 KEGG:ns NR:ns ## COG: STM4125 COG0583 # Protein_GI_number: 16767389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 305 1 305 305 585 97.0 1e-167 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GLLLVDQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVGPYLLPQIIPMLHQTFPKL EMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMMLAIYEDHPWANRDR VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPHERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRGAMDGHFDNA LKQAV >gi|333596726|gb|GL892086.1| GENE 99 130887 - 132260 1855 457 aa, chain - ## HITS:1 COG:STM4123 KEGG:ns NR:ns ## COG: STM4123 COG0165 # Protein_GI_number: 16767388 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Salmonella typhimurium LT2 # 1 456 1 456 458 834 94.0 0 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEE ALNNLLEEVRLDPEQILQSDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLW CKETVGELLAANRQLQSALVDTAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDE SRLQDTLKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS NASIGMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMGALVLDGIQVKRPRCQEAA QQGYANSTELADYLVAKGVPFREAHHIVGEAVVEAIRQGKALEELALADLQKFSAVIAED VYPILALQSCLDKRAAKGGVSPKQVAQAIAEAKNRLV >gi|333596726|gb|GL892086.1| GENE 100 132338 - 133111 1009 257 aa, chain - ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 257 2 258 258 437 95.0 1e-123 MNPLIIKLGGVLLDSEEALERLFTALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKK KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHHIASVGLYLGDGDSVKVTQLDEELGH VGLAQPGSPKLINTLLEGGFLPVVSSIGVTEEGELMNVNADQAATALAATLGADLILLSD VSGILDGKGQRIAEMTAAKAEQLIDQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE QLPALFNGTPIGTRILA >gi|333596726|gb|GL892086.1| GENE 101 133121 - 134125 1154 334 aa, chain - ## HITS:1 COG:STM4121 KEGG:ns NR:ns ## COG: STM4121 COG0002 # Protein_GI_number: 16767386 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 613 89.0 1e-175 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGVVDLPL QPMSDISEFTDGVDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVNDSAFYEKYYGF THQHPELLEKAVYGLAEWSADKLKEANLIAVPGCYPTAAQLSLKPLIDAGLLDLSQWPVI NATSGVSGAGRKAAISNSFCEVSLQPYGVFNHRHHPEITTHLGAEVIFTPHLGSFPRGIL ETITCRLKPGVTKEQVSEVFTQAYADKPLVRLYDKGVPALKNVVGLPFCDIGFAVQDEHL IVVAAEDNLLKGAAAQAMQCANIRFGFPETQALI >gi|333596726|gb|GL892086.1| GENE 102 134214 - 135365 1259 383 aa, chain + ## HITS:1 COG:STM4120 KEGG:ns NR:ns ## COG: STM4120 COG0624 # Protein_GI_number: 16767385 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Salmonella typhimurium LT2 # 1 383 1 383 383 747 92.0 0 MKMNLPPFIEIYRALIATPSISATEEALDQSNESLINLLAGWFSDLGFNVEVQPVPGTRH KFNLLASTGHGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFI LDALRDVDVTTLKKPLYILATADEETSMAGARYFSENTSIRPDCAIIGEPTSLQPIRAHK GHISTAVRVLGQSGHSSDPARGVNAIELMHDAIGRIMALRDDLKERYHYEAFTVPYPTLN LGSLHGGDASNRICACCELHMDIRPLPGMTLSDLDGLLNEALAPVSERWPGRLTVSELHP PIPGYECPPDHQLVEVVEKLLGEKTDVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEY LETRFIKPTRELITQVVHHFCWH >gi|333596726|gb|GL892086.1| GENE 103 135712 - 138324 3568 870 aa, chain + ## HITS:1 COG:STM4119 KEGG:ns NR:ns ## COG: STM4119 COG2352 # Protein_GI_number: 16767384 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Salmonella typhimurium LT2 # 1 870 14 883 883 1605 92.0 0 MLGKVLGDTIKDALGENILDRVETIRKLSKSSRAGNEANRQELLTTLQNLSNDELLPVAR AFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKDQPDLNEATIKKAVESLSLEL VLTAHPTEITRRTLIHKMVEVNNCLKQLDNKDIADYERNQLMRRLRQLIAQSWHTDEIRK HRPSPVDEAKWGFAVVENSLWEGVPNYLRELNEQLEENLGYRLPVDFVPVRFTSWMGGDR DGNPNVTAEITRHVLLLSRWKATDLFLKDIQVLISELSMVEATPELRALAGEEGASEPYR FLMKKLRGQLMATQAWLEARLKGQRLPKPEGLLSQNEQLWEPLYACYKSLQACGMGIIAN GELLDTLRRVKCFGVPLVRIDVRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRE LNSKRPLLPRNWEPSNDTREVLNTCKAIVDAPKGSVAAYVISMAKTPSDVLGVHLLLKEA GIDYALPVAPLFETLDDLNNANDVMTQLLNIDWYRGFIQGKQMVMIGYSDSAKDAGVMAA SWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLRGGLRVTEQ GEMIRFKYGLPEVTISSLSLYTSAILEANLLPPPEPKESWCRIMDELSDISCDLYRGYVR ENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLG AGAALQKVVEDGKQSELETMCRDWPFFSTRLGMLEMVFSKADLWLAEYYDQRLVKPELWA LGKELRELLEGDIKVVLDIANDSHLMEDLPWIAESIQLRNIYTDPLNVLQAELLHRSRLA EEEGKEPDPRVEQALMVTIAGVAAGMRNTG >gi|333596726|gb|GL892086.1| GENE 104 138531 - 139634 1331 367 aa, chain + ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 367 1 367 367 664 90.0 0 MDRIIQSPGKYIQGADVLTRLGDYLKPLANRWLVVGDKFVLGFAEETLRQSFKNAGLHAE IAPFGGECSQNEIDRLKKLADSADCLAVLGIGGGKTLDTAKALAHFMDVPVAIAPTIAST DAPCSALSVIYTDSGEFDRYLMLPHNPNMVIVDTKVVAGAPARLLAAGIGDALATWFEAR ACSRSGATTMAGGKCTQAALALAELCYNTLVEEGEKAMLAAEQHVVTPALERIIEANTYL SGVGFESGGLAAAHAIHNGMTAVPDAHHFYHGEKVAFGTLTQLVLENAPVEEIETVAALC HSVGLPITLAQLNIKEDIPAKMRLIAEASCAEGETIHNMPGGVTPDQVYAALLVADQYGQ RFLQEWE >gi|333596726|gb|GL892086.1| GENE 105 139726 - 141906 2555 726 aa, chain - ## HITS:1 COG:STM4106 KEGG:ns NR:ns ## COG: STM4106 COG0376 # Protein_GI_number: 16767372 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Salmonella typhimurium LT2 # 1 726 1 726 726 1279 88.0 0 MSTSDETNNAASAGKCPFHQGGVDHSAGAGTGSKEWWPKQLRIDLLNQHSNRSNPLGEDF DYRKEFSKLDYSALKGDLKALLTDSQPWWPADWGSYAGLFIRMAWHGAGTYRSVDGRGGA GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG FGAGREDVWEPDLDVNWGDEKAWLTHRDPEALAKRPLAATEMGLIYVNPEGPNASGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGEATHVGTDPEASPIEAQGLGWAST HGTGIGADAITSGLEVIWSQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIMP DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS RYIGPEVPKEDLIWQDPLPQPVFHPTQEDIESLKAEIVASGLSVSELVSVAWASASTFRG GDKRGGANGARLALAPQRDWDVNAAAVRALPALEAIQRTTNKASLADIIVLAGVVGVEQA AKAAGVYVNVPFTPGRVDARQDQTDIEMFNLLEPIADGFRNYRAQVDVSTTESLLIDKAQ QLTLTAPELTVLIGGLRVLGANFDGSKNGVFTNREGVLSNDFFVNLLDMNTQWKAADDSN ELFTGSDRASGEVKYTATRADLVFGSNAVLRALAEVYASSDAHEKFVRDFVAAWARVMDL DRFDVK >gi|333596726|gb|GL892086.1| GENE 106 142050 - 142940 1069 296 aa, chain - ## HITS:1 COG:STM4105 KEGG:ns NR:ns ## COG: STM4105 COG0685 # Protein_GI_number: 16767371 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 588 95.0 1e-168 MSFFHANQREALNQSLAEVNGQINVSFEFFPPRTSEMEQTLWSSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATRDELRAIAQDYWNNGIRHIVALRGD LPPGSGKPEMFAADLVGLLKDVADFDISVAAYPEVHPEAKSAQADLLNLKRKVEAGANRA ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPLWMSKMYE GLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPAL >gi|333596726|gb|GL892086.1| GENE 107 143203 - 145635 3315 810 aa, chain - ## HITS:1 COG:metL_1 KEGG:ns NR:ns ## COG: metL_1 COG0527 # Protein_GI_number: 16131778 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 448 1 448 448 823 92.0 0 MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMTEYSQPGDMMVVSAAGSTTNQLISW LKLSQTDRLSAHQVQQSLRRYQSELIAGLLPADVADGLISAFTHDLERLAALLDSGITDA VYAEVVGHGEVWSARLMAAVLQHLGVEAAWLDARDFLRAERAAQPQVDEGLSYPLLQQLL VQHPGKRIVVTGFISRSNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSDIDLQLRCSYTPDQGSTRIER VLASGTGARIVTSHDDICLIEFQVPAGQDFKLAHKDIDTILKRAQVRPLAVGVHNDRQLL QFCYTAEVVDSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV EFTWQSEEGISLVAVLRKGPTESLIQGLHTSLFRAEKRIGLVLFGKGNIGSRWLELFARE QVTLSARTGFEFILAGVVDSRRSLLNYEGLDASRALAFFNDEAVEQDEESLFLWMRAHPY DDLVVLDVTASEQLADQYLDFASHGFHVISANKLAGASSTDKYRQIHDAFEKTGRHWLYN ATVGAGLPVNHTVRDLIESGDSILALSGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGLT EPDPRVDLAGKDVMRKLVILAREAGYDIEPGQVRVESLVPAGCEEGSVDHFFENGDELNE QMVQRLEAANEMGLVLRYVARFEANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYRD NPLVIRGPGAGRDVTAGAIQSDINRLAKLL >gi|333596726|gb|GL892086.1| GENE 108 145638 - 146798 1069 386 aa, chain - ## HITS:1 COG:metB KEGG:ns NR:ns ## COG: metB COG0626 # Protein_GI_number: 16131777 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 386 1 386 386 741 94.0 0 MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVTQRA LAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL FVDQNDEQALKQALAEQPKLVLVESPSNPLLRVVDIAKICQLARDAGAISVVDNTFLSPA LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTAGAFDSYL LLRGIRTLSPRMEVAQRNAQAIVDFLKTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML SFELDGDEQTLRRFLSGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL RISTGIEDSEDLIADLENGFRVAAKG >gi|333596726|gb|GL892086.1| GENE 109 147074 - 147391 371 105 aa, chain + ## HITS:1 COG:YPO0114 KEGG:ns NR:ns ## COG: YPO0114 COG3060 # Protein_GI_number: 16120460 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Yersinia pestis # 1 105 1 105 105 191 91.0 2e-49 MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE AFLHAFTGQPLPNDDDLRKERSDEIPEEAKVIMRELGIDPETWEY >gi|333596726|gb|GL892086.1| GENE 110 147434 - 148114 720 226 aa, chain - ## HITS:1 COG:no KEGG:SARI_03559 NR:ns ## KEGG: SARI_03559 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 14 226 14 226 226 323 84.0 3e-87 MKLKQLLFVLPLLSCAAQAGYVDYRHEYYDDGRNYDRVYMSHRFGTGFGVAVEAVSRSDE KQSNDALNNMESNSNEYTASYQFTWQGFIWQPGVAVEMGDDMAIYKPYLRVQYNINDSWW TAFRYRTEYTRRNADGKDDRTVYRPEMWLGYNIDNWMFELNGIYKFADNEDLYNNKKEDY EYNFRVAYNIDSWVPFVEVGNVSSGYNTATTDDRQTRLRVGLGYNF >gi|333596726|gb|GL892086.1| GENE 111 148436 - 148648 367 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313669|ref|YP_001178743.1| 50S ribosomal protein L31 [Enterobacter sp. 638] # 1 70 1 70 70 145 92 5e-33 MKKDIHPKYEMITANCSCGNSIQIRSTVGHDLNLDVCGKCHPFYTGKQRDVATGGRVDRF NKRFSIPGAK >gi|333596726|gb|GL892086.1| GENE 112 148849 - 151044 2519 731 aa, chain + ## HITS:1 COG:STM4095 KEGG:ns NR:ns ## COG: STM4095 COG1198 # Protein_GI_number: 16767361 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Salmonella typhimurium LT2 # 1 731 1 732 732 1334 90.0 0 MPVAHVALPVPLPRTFDYLLPDSMNAKAGCRVTVPFGKQQRVGIVVSVSEQSELPLNELK SVIEVLDSEPVYSTSTWRLLLWAADYYHHPIGDVLFHALPIMLRQGKSASHAPMWYWFAT EQGQAVDINSLKRSQKQQQALAALRQGKIWRHQVDELEVSEAALQALRKKGLSELASEAP ALHDWRDGFSVSGDRLRLNTEQATAVGAIHSAADHFSAWLLAGVTGSGKTEVYLSVLENV LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI GTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL ETLHNVRQRKYHMLRLTRRAGNARPAIQHVLDLKGQQVQAGLAPALINRMRQHLQAGNQV ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTFHQAQRHLRCHHCDSQRPVPRQCPSCGS THIVPVGLGTEQLEQALAPFFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP EHPLLQTLLHKGYDAFAEQALAERQTMQLPPWTSHVIIRAEDHNNQQAPLFLQQLRNLLQ ASPLVDNQLWILGPVPALAPKRGGRFRWQLLLQHPSRIRLQQIVSGTLALINTLPEARKV KWVLDVDPIEG >gi|333596726|gb|GL892086.1| GENE 113 151196 - 152188 844 330 aa, chain + ## HITS:1 COG:STM4094 KEGG:ns NR:ns ## COG: STM4094 COG1609 # Protein_GI_number: 16767360 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 329 12 340 341 600 87.0 1e-171 MKDVAEKAQVSTATVSRALMNPDKVSQATRNRVEKAALEVGYFPQAMGRNVKRNESRTIL VIVPDICDPFFSEIIRGIEVTAAAQGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLG SRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFNAVNYLQELGHKRIGCIA GPEEMPLCHYRLQGYVQALRRTGAIVDPHYIARGDFTFEAGGQALEKLLALPEPPTAVFC HSDVMALGALSYAKRHGLRVPQDLSIIGFDNISLSEFCDPPLSTVAQPRYDIGREAMLLL LDQLHGQTVSSGSRLLDCELIVRGSTQALT >gi|333596726|gb|GL892086.1| GENE 114 152386 - 153249 794 287 aa, chain + ## HITS:1 COG:STM4093 KEGG:ns NR:ns ## COG: STM4093 COG3087 # Protein_GI_number: 16767359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 287 39 324 324 317 81.0 2e-86 MVAIAAAVLVAFIGGLYFITHHKKEESEALQGNKVVGNGLPPKPEERWRYIKELESRQPG VRAPTEPSAGGEVKNADQLTDEQRQLLAQMQADMRQQPTQLNEVPWNEQTPAQRQQTLQR QRQAQQQTQQQQWTQTQPVQQPRTQPQQQTRTVQTQPVQQQPKAQPQKQTAQPYQDLLQT PAHTTAQQPKTQQAAPVTKETEAPKQTAEKKDERRWMVQCGSFKGAEQAETVRAQLAFEG FDSRITTNNGWNRVVIGPVKGKENADGTISRLKVAGHTNCIRLASGG >gi|333596726|gb|GL892086.1| GENE 115 153278 - 153547 160 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHFQFAFKQFKQREGIRRAACETGDHFVVIKTTYFLHVAFHNGITQRGLAITGNYHLAVT AYTYYCCHEQTPWLQIRETEALSLCSGLN >gi|333596726|gb|GL892086.1| GENE 116 153425 - 153874 611 149 aa, chain + ## HITS:1 COG:STM4092 KEGG:ns NR:ns ## COG: STM4092 COG5405 # Protein_GI_number: 16767358 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Salmonella typhimurium LT2 # 1 149 28 176 176 266 94.0 1e-71 MKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDR MLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTDMNARD IAVKALDIAGDICIYTNHNHTIEELTSKA >gi|333596726|gb|GL892086.1| GENE 117 153884 - 155215 1207 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 443 8 466 466 469 52 1e-130 MSEMTPREIVSELNKHIIGQDNAKRSVAIALRNRWRRMQLDEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAIKMVRVQAIEKNR YRAEEMAEERILDVLIPPAKNNWGQAEQQSEPSAARQAFRKKLREGELDDKEIEIDLAAA PMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELK QDAIDAVEQHGIVFIDEIDKICKRGNASGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTD HILFIASGAFQIASPSDLIPELQGRLPIRVELQALTTEDFERILTEPNASVTVQYKALMA TEGVNIEFTDDGIKRIAQAAWQVNESTENIGARRLHTVLERLMEDISYDASDLNGQSITI DADYVGKHLDALVADEDLSRFIL >gi|333596726|gb|GL892086.1| GENE 118 155284 - 156204 1391 306 aa, chain + ## HITS:1 COG:ECs4857 KEGG:ns NR:ns ## COG: ECs4857 COG1575 # Protein_GI_number: 15834111 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Escherichia coli O157:H7 # 4 303 6 305 308 503 89.0 1e-142 MTDISRTQAWLESLRPKTLPLAFAAIIVGTTLAWWQGHFDPLVAGLALVTAGLLQILSNL ANDYGDAVKGSDKPDRIGPLRGMQKGVITQAQMKRALIITVVLICLSGLALVTVASKTTS DFIGFLVLGLLAIIAAITYTVGTRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTVIPAL FLPATACGLLATAVLNINNLRDIDSDRENGKNTLAVRLGPVNARRYHACLLIGALVCLAL FNLISLHSLWGWLFVLAAPLLIKQARYVMRELSPAAMPPMLERTVKGALLTNLLFVIGIV LSQTLS >gi|333596726|gb|GL892086.1| GENE 119 156297 - 156782 702 161 aa, chain + ## HITS:1 COG:STM4089 KEGG:ns NR:ns ## COG: STM4089 COG0684 # Protein_GI_number: 16767355 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 286 94.0 2e-77 MKYDTSELCDIYQEDVNVVEPLFSNFGGRSSFGGQIITVKCFEDNGLLYDLLEENGRGRV LLVDGGGSVRRALIDADLARLAVQNEWEGIVVYGSVRQVDDLEDLDIGIQAIAAIPVGAA GEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDALDIE >gi|333596726|gb|GL892086.1| GENE 120 156864 - 157103 513 79 aa, chain - ## HITS:1 COG:ECs4853 KEGG:ns NR:ns ## COG: ECs4853 COG3074 # Protein_GI_number: 15834107 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 79 3 81 81 81 94.0 3e-16 MSLEVFEKLESKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHGREELERENNQLRE QQNGWQERLQALLGRMEEV >gi|333596726|gb|GL892086.1| GENE 121 157503 - 158348 819 281 aa, chain + ## HITS:1 COG:STM4087 KEGG:ns NR:ns ## COG: STM4087 COG0580 # Protein_GI_number: 16767353 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 492 91.0 1e-139 MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISIIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFDGRKVVPFIISQFAGAFCAAALVYGLYYNLFIDFEQTHH MVRGSVESLDLAGIFSTYPNPHINFVQAFAVEMVITAILMGVIMALGDDGNGIPRGPLAP LLIGLLIAVIGASMGPLTGFAMNPARDLGPKTFAFFAGWGDVAFTGGKDIPYFLVPLFGP IVGAALGAFGYRKLIGRHLPCDTCVEEEKETTSTTQQKASL >gi|333596726|gb|GL892086.1| GENE 122 158370 - 159878 2122 502 aa, chain + ## HITS:1 COG:STM4086 KEGG:ns NR:ns ## COG: STM4086 COG0554 # Protein_GI_number: 16767352 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Salmonella typhimurium LT2 # 1 502 1 502 502 987 95.0 0 MTEKKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPRPGWVEHDPMEIWASQSST LVEVLAKADISSDQIAAIGITNQRETTVVWERETGKPIYNAIVWQCRRTSEICEQLKREG MEEYVRSATGLVVDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVH VTDYTNASRTMLFNINTLEWDDKMLDALDIPRAMLPEVRKSSEVYGQTNIGGKGGTRIPI AGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPRGEVN YALEGAVFMAGASIQWLRDEMKLISDAFDSEYFATKVKDTNGVYVVPAFTGLGAPYWDPY ARGAIFGLTRGVNSNHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER NYRYSGWKKAVKRALAWEEHDE >gi|333596726|gb|GL892086.1| GENE 123 160044 - 161054 1352 336 aa, chain + ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 336 1 336 336 558 89.0 1e-159 MKRELAIEFSRVTEAAALAGYKWLGRGDKNTADGAAVHAMRIVLNQVNIDGTIVIGEGEI DEAPMLYIGEKVGTGKGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYM EKLIVGPGAKGAIDLSLPLDANLRNIAAALGKALSELTVTILAKPRHDATIAYLQALGVR VFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMQARLLPRHEVKG DSDENLRIGEDELARCAAMGIEANKVLALNEMARSDNVVFSATGITKGDLLDGITRKGNM ATTETLLIRGKSRTIRRIKSIHYLDRKDPDVQTHIL >gi|333596726|gb|GL892086.1| GENE 124 161151 - 161897 939 248 aa, chain + ## HITS:1 COG:ECs4849 KEGG:ns NR:ns ## COG: ECs4849 COG1018 # Protein_GI_number: 15834103 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 473 90.0 1e-133 MADWVTGKVTKVQFWTDALFSLTLHAPVHPFTAGQFAKLGLDIDGERVQRAYSYVNAPDN PDLEFYLVTVPDGKLSPRLAALKPGDDVQIVSDAAGFFVLDEIPDCETLWMLATGTAIGP YLSILQYGKDLERFKNIVLVHAARYAADLSYLPQMQALEQRYGGKLKIQTVVSRETAAGS LTGRVPALIESGALEEAVGLPMNTETSHVMLCGNPQMVRDTQQLLKDTRQMTKHLRRRPG HMTAEHYW >gi|333596726|gb|GL892086.1| GENE 125 161898 - 162317 528 139 aa, chain - ## HITS:1 COG:ECs4846 KEGG:ns NR:ns ## COG: ECs4846 COG3152 # Protein_GI_number: 15834100 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 139 1 139 146 186 72.0 1e-47 MTIQQWLFSFKGRIGRRDFWIWIATWVVAMLLLFFVAYNAWLSTQTAAFALVCLLWPTAA VVVKRLHDRGRSGAWAFLIILAWMLVAGNWSMLPSILPWVVGRLLPTVIFVMMVVELGAF IGTQSENKYGKDTLEVKYR >gi|333596726|gb|GL892086.1| GENE 126 162469 - 163026 849 185 aa, chain + ## HITS:1 COG:no KEGG:Ent638_4051 NR:ns ## KEGG: Ent638_4051 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 185 14 198 198 291 87.0 6e-78 MLSASFPLYAAETASPVTAPYLLAGAPSFDQSISQFREAFNKENPSLPLGEFRAIDSARD TPTLTRAASKINENLYASTALERGTLKIKSMQITWLPIQGPEQKAAKAKALEYMSAILRA FTPTFTKAQSQQKLQKLLTAGKNKRYYADTEGAVRYVVADNGEKGLTFAVEPIKLALSDA LEGAN >gi|333596726|gb|GL892086.1| GENE 127 163138 - 163905 952 255 aa, chain + ## HITS:1 COG:STM4081 KEGG:ns NR:ns ## COG: STM4081 COG0149 # Protein_GI_number: 16767347 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 255 1 255 255 437 94.0 1e-122 MRHPLVMGNWKLNGSRHMVNELVANLRKELAGVTGCAVAIAPPDMYLDLAKRAADGSHIV LGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFAVLKEQG LIPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKADAKVAEQVIIQYGGSVNASNAAELFTQPDIDGALVGGASLKAD AFAVIVKAAEAAKQA >gi|333596726|gb|GL892086.1| GENE 128 163988 - 165292 1715 434 aa, chain - ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 8 423 3 416 422 60 22.0 9e-09 MSLWLTHPLLLPSLIVGVTIVLWATSLLPEFITALLFFTAAMTARIAPPEVIFGGFASSA FWLVFSGFVLGVAIRKTGLADRAARALSAKLTDSWVMMVASVVLLSYALAFVMPSNMGRI ALLMPIVAAMAKRAGIADGSRAWFGLALAVGFGTFQLSATILPANVPNLVMSGAAEGSYG IHLNYVPYLLLHTPVLGILKGLILIGLICWLFSGSPKPPKDLTPSEPMGGDEKRLAWLLA VVLMMWVTESWHGVGPAWTGLAASVIVMLPRIGFITGEEFSAGVNMRTCIYVAGILGLAI VVTQTGIGAAVGEALLRIMPLDADRPFTSFLALTGITTALNFIMTANGVPALYTTLAQSF ADATGFPLLSVIMIQVLGYSTPLLPYQASPIVVAMGLGKVPAKAGMLLCLALAIATYLVL LPLDYLWFSLLGRL >gi|333596726|gb|GL892086.1| GENE 129 165366 - 166109 704 247 aa, chain - ## HITS:1 COG:STM4064 KEGG:ns NR:ns ## COG: STM4064 COG2134 # Protein_GI_number: 16767330 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Salmonella typhimurium LT2 # 1 246 1 248 251 389 74.0 1e-108 MKKIIVLILIVLALAAGGVYWMKAGNPNALRHIVLDQCVPNQLHNRNPAPCAQVKPDAGY VVFKDRNGPLQYLLMPTYRINGTESPLLTEPQTPNFFWLAWQSRHFMSMKRGADVPDSAI SLTINSPTGRTQNHFHIHISCLRPDVREKLNAAQGQISTQWLPLPGGLEGHEYLARRVTE NELVQRSPFMMLAEELPEARDHMGRFALAMAQQSDGSFVLLATERNLLTFNRASAEELQD HQCDILK >gi|333596726|gb|GL892086.1| GENE 130 166221 - 167210 1442 329 aa, chain - ## HITS:1 COG:STM4063 KEGG:ns NR:ns ## COG: STM4063 COG1613 # Protein_GI_number: 16767329 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 329 1 329 329 610 93.0 1e-175 MNKWGVGLILLLASTSVLAKDIQLLNVSYDPTRELYDQYNKAFAAHWKQETGDNVVVRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKNWIKRLPDNSAPYTSTIVFLV RKGNPKQIKDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNGDQAKAQEFVKA LFKNVEVLDSGARGATNTFVERGIGDVLIAWENEALLATHELGKDKFEIVTPSESILAEP TVSVVDKVVDKKGTKAVAEAYLKYLYSPEGQEIAAKNYYRPRDEAVAKKYENAFPKLKLF TIDDVFGGWTKAQKEHFSNGGTFDQISKR >gi|333596726|gb|GL892086.1| GENE 131 167419 - 168381 1300 320 aa, chain - ## HITS:1 COG:STM4062 KEGG:ns NR:ns ## COG: STM4062 COG0205 # Protein_GI_number: 16767328 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Salmonella typhimurium LT2 # 1 320 1 320 320 600 94.0 1e-171 MIKKIGVLTSGGDAPGMNAAIRGVVRAALTEGLEVFGIYDGYLGLYEDRMVQLDRYSVSD MINRGGTFLGSARFPEFRDEHIREVAIENMKKRGLDALVVIGGDGSYMGAKRLTEMGFPC IGLPGTIDNDIKGTDYTIGYFTALGTVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTLA AAIAGGCEFVVVPEVEFSREDLVAEIKAGIAKGKKHAIVAITEHICDVDELAKYIETETK RETRATVLGHIQRGGSPGPYDRILASRMGAYAIELLLQGHGGRCVGIQNEKLVHHDIIDA IENMKRPFKGDWLDCAKKLY >gi|333596726|gb|GL892086.1| GENE 132 168566 - 169450 568 294 aa, chain - ## HITS:1 COG:STM4061 KEGG:ns NR:ns ## COG: STM4061 COG0053 # Protein_GI_number: 16767327 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Salmonella typhimurium LT2 # 1 292 1 292 300 510 91.0 1e-144 MNQSYGRLVSRAAIAATVMASCLLIIKIFAWWYTGSVSILAALVDSLVDIAASLTNLLVV RYSLQPADEEHTFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPSPMNDPGVGVVV TVVALISTLVLVTFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILIALGLAWYGWHRADA LFALGIGIYILYSALRMGYDAVQSLLDRALPDAECDEIYTLVTSWPGVSGAHDLRTRQSG PTRFIQIHLEMEDNLPLVQAHLIAEQVEQAILQRFPGSDVIIHQDPCSVVPRAF >gi|333596726|gb|GL892086.1| GENE 133 170040 - 171101 144 353 aa, chain - ## HITS:1 COG:STM2695 KEGG:ns NR:ns ## COG: STM2695 COG3500 # Protein_GI_number: 16766008 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 29 353 13 340 366 320 52.0 2e-87 MLVHEYLAIKKGISNGVSGINNTLTEACKSPAFSIKMGNKVLQELADRVISLSLTDNRGF EADQLTMELDDTAGDVALPGRGVELSLWLGWMGEALIYKGVYTVDEVAHDGPPDRITVTA RCADFREEFNVKREVSWHDVTVERVVSAIAKRYGLKAQISDMLMNIEIDHADQTQKSGMS FLTRMAEMLGAIATVKNGYLLFIIPGGGFTASGKPIPSIAITRSSGDRHRFRIADRDAYT GVRAYWLDLNFGKKKKVSVKRRASTKKADKSSSRERDYIEGADGNVFIMRKTFQNEDAAR RAAAAKWQQLQRGAAEFSITLARGRADLYPEMHATVTGFKADIDAQDWIISKV >gi|333596726|gb|GL892086.1| GENE 134 171211 - 171432 107 73 aa, chain - ## HITS:1 COG:no KEGG:plu4458 NR:ns ## KEGG: plu4458 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 73 669 741 741 129 83.0 4e-29 MLGSTLKNPVFDIHYNAREAGASIASHKAEKIKYALIITVKAAKHQDLYNEILRAYNQVL VPIQPQTSIPIRS >gi|333596726|gb|GL892086.1| GENE 135 173836 - 174321 111 161 aa, chain - ## HITS:1 COG:no KEGG:plu4458 NR:ns ## KEGG: plu4458 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 160 1 160 741 209 61.0 3e-53 MAKTNFLIGRGELLTNDIPGPKRAPGKAEVYSLYESKQRLLPQIASTIENFAKLPGRACP DDYAVAKVTINPSYIARSFFPAKMLKSTGLTSIGSRTVRVTPQSWKRKVAVSEVTTTQMF IAGKRESFEELPHWVSGLKELTDEAIDFARIEKFEAYLPDS >gi|333596726|gb|GL892086.1| GENE 136 174335 - 175267 160 310 aa, chain - ## HITS:1 COG:AGpT158 KEGG:ns NR:ns ## COG: AGpT158 COG0464 # Protein_GI_number: 16119896 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 30 196 107 273 345 128 38.0 2e-29 MPKPTQSQVMPVDEDSRLTLLKAPSEKITSKPLLSSQIEDSLDQIILERKHIDRLKTLGL QPTRSAIFVGPPGVGKTLTASWLAQKLGVPFYVLDLTAVMSSYLGKSGNNLRAALDFAKR GPCVLLLDEIDSIAKKRSDDSDVGELKRLVTVILQEVDEWPSSSLLLAATNFAELIDPAL WRRFDLVLNFEKPNSESIKEAIKRFLGSDYAIFARWIDLLVIMFKDESFSNIERSINKFR RSVALGISSDEELIESFIKDGLSDLERNERIEIAVNLNRHSKLSQHAISDLTGVSRDTIR KYSSKKSNAA >gi|333596726|gb|GL892086.1| GENE 137 175594 - 176289 243 231 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|320198800|gb|EFW73400.1| ## NR: gi|320198800|gb|EFW73400.1| Phage replication protein [Escherichia coli EC4100B] # 1 227 511 741 743 279 62.0 1e-73 MPASSIPPVETRLHSYRIVKMKPKSSDRADPGFDLKGASAPSWTRVNNCAEYKKHTDSPP LNPPDLTVLAGEMQPEQFEIGQLSRDQRKQIAEDIRNHKLNQRVSPADQFEALALSITAG DCTDYDRARAESYMKAAHAIRQEESAVSEEVESLAEEIMGWAKLRKISINPVQALKLAQG GEVTALDTKYRANPLTGELIVTGTDMHWRKMLARHKAEALISRWRQAAREV >gi|333596726|gb|GL892086.1| GENE 138 177094 - 177600 248 168 aa, chain - ## HITS:1 COG:STM4060 KEGG:ns NR:ns ## COG: STM4060 COG3678 # Protein_GI_number: 16767326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 166 168 82.0 4e-42 MRKVTAAVMASTLAFSAFSQAAVAIISDNGSSAEGATQHSSQNHMFDGISLTEHQRQQMR DLMQRARHDQPPVNVSEMETMHRLVTAENFDESAVRAQAEKMAQEQVARQVEMAKVRNQM FHLLTPEQQAVLNTKHQQRMNQLREVARMQRSSDMTLFSSNSSTRSNQ >gi|333596726|gb|GL892086.1| GENE 139 177751 - 178449 859 232 aa, chain + ## HITS:1 COG:STM4059 KEGG:ns NR:ns ## COG: STM4059 COG0745 # Protein_GI_number: 16767325 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 395 96.0 1e-110 MNKILLVDDDRELTSLLKELLDMEGFNVLVAHDGEQALTLLDDSIDLLLLDVMMPKKNGI DTLKELRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHW SEQQQNTDNSSPTLEVDSLSLNPGRQEASFDGETLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGHPWFKTLRGRGYLMVSAS >gi|333596726|gb|GL892086.1| GENE 140 178446 - 179819 1400 457 aa, chain + ## HITS:1 COG:STM4058 KEGG:ns NR:ns ## COG: STM4058 COG0642 # Protein_GI_number: 16767324 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 457 1 457 457 790 95.0 0 MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGVMIEQHVEAELAND PPNDLMWWRRLFRAIDKWAPPGQRLLLVTSEGRVIGADRNEMQIIRNFIGQADNADHPQK KKYGRVEMVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSSPLLL WLAWSLAKPARKLKNAADEVAQGNLRQHPELESGPQEFLAAGTSFNQMVSALDRMMTAQQ RLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAHRLDSMINDLLVMSRNQQK NALVSETVKANHLWHEVLDNAAFEAEQMGKSFTVNFPPGPWPLYGNPNTLESALENIVRN ALRYSHTKIEVAFSVDKDGITIIVDDDGPGVSPEEREQIFRPFYRTDEARDRESGGTGLG LAIVETAMQQHRGWVKADDSPLGGLRLTLWLPLYKRS >gi|333596726|gb|GL892086.1| GENE 141 179873 - 180547 456 224 aa, chain - ## HITS:1 COG:STM4056 KEGG:ns NR:ns ## COG: STM4056 COG2258 # Protein_GI_number: 16767322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 223 22 244 250 387 79.0 1e-108 MHYPVNVFTGKVREYDGSRPSAIAKVQVDGELMLTDLGLAGDQQAEKKIHGGPDRALCHY PREHYQHWKAEFPEQAERFVAPAFGENLSTEGLTEKNVFIGDIFRWGDALIQVTQPRSPC FKLNYHFGIQDMSAQLQNAGKTGWLYRVVQAGQVSADAPLELASRLSEVSVYDACAIAWH MPFDDEQFHRLLSAAGLSTSWTRTMQKRRISGKIESSSRRLWGR >gi|333596726|gb|GL892086.1| GENE 142 180614 - 181234 580 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 206 1 201 201 228 55 1e-57 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFASLPVEELITK LDQLPADKKTVLRNNAGGHANHSLFWKGLKTGTTLQGDLKAAIERDFGSVDNFKAEFEKA AATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQN RRPDYIKAFWDVVNWDEAAARFAAKK >gi|333596726|gb|GL892086.1| GENE 143 181523 - 182557 1492 344 aa, chain + ## HITS:1 COG:STM4050 KEGG:ns NR:ns ## COG: STM4050 COG0697 # Protein_GI_number: 16767316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 344 1 344 344 570 90.0 1e-162 MNHAITMGIFWHLIGAASAACFYAPFKKVKGWSWETMWSVGGTVSWLILPWTISAMLLPD YWGYFSSFNASTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI LNGHFDVLINTQGGRMTLLGVLVAVIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVM CGVFSAGMSFAMNAAKPMHDAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVK NLSVKADFSLAKPLIVTNVLLSALGGLMWYLQFFFYAWGHASIPPQYDYMSWMLHMSFYV LCGGLVGLVLKEWNNAGRRPVGVLSLGCVVIIIAANIVGLGMAN >gi|333596726|gb|GL892086.1| GENE 144 182558 - 183406 824 282 aa, chain - ## HITS:1 COG:STM4049 KEGG:ns NR:ns ## COG: STM4049 COG2207 # Protein_GI_number: 16767315 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 281 1 281 282 440 74.0 1e-123 MAAQLILRKDDFFASASQAVAVADRYPQNVFAEHTHEFCELVLVWRGNGLHILNDRPYRI TRGDLFYIRAEDKHSYASVNDLVLQNVIYCPDRLKLNVDWAGSIPGFLDTRGEPHWRLSS NGMAQVRQTISQLEQESQKSDPLANQMSELLFAQLVMTLKRHRYATDNPSATTQEALLDK LITRLAGSLNKSFVLEKFCEQEQCSERALRQQFRTQTGMTVNHYLRQLRICHAQYLLQHT ELMVSEVAMRCGFEDSNYFSVVFNREVGMTPVQWRHRSRKAA >gi|333596726|gb|GL892086.1| GENE 145 183480 - 184316 782 278 aa, chain - ## HITS:1 COG:STM4048 KEGG:ns NR:ns ## COG: STM4048 COG2207 # Protein_GI_number: 16767314 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 278 1 278 278 482 87.0 1e-136 MTVLHSVDFFPSGASPVAIEPRLPQAAFPEHHHDFHEIVIVEHGTGIHVFNGQPYTISGG TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDAFQFLSGLNQLLPQEKDGHYPSHWRVNQST LQQVRQLVSQMEQSEDGQETHAIATRELLFMQLLVLLRRSSLVEGLENNDARLNQLMAWL EDHFAEDVCWETLADDFSLSLRTLHRQLKQHTGLTPQRYLNRLRLIKARHLLRHTDESVT DIAYRCGFGDSNHFSTLFRREFSWSPRDIRQGKDALLQ >gi|333596726|gb|GL892086.1| GENE 146 184618 - 186087 1681 489 aa, chain + ## HITS:1 COG:STM4047 KEGG:ns NR:ns ## COG: STM4047 COG1070 # Protein_GI_number: 16767313 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Salmonella typhimurium LT2 # 1 489 1 489 489 825 80.0 0 MTFRHCVAVDLGASSGRVMLATWDCDLHTLTLREMHRFANCLQKQDGFVTWDIDALEAEI RTGLHNVCNDGIRIDSIGIDTWGVDYVLLDSHGERVGLPVSYRDSRTDGLMAHAIAQLGK ENIYGRSGIQFLPFNTLYQLRALVEQQPELVEKVAHALLIPDYLSYRLTGNMNWEYTNAT TTQLVNINTDNWDEHLLAWTGASPSWFGTPTHPGNVIGHWLCPQGNEIPVVAVASHDTAS AVIASPLTSKDAAYLSSGTWSLMGFESKTPYTSDAALAANITNEGGAEGRYRVLKNIMGL WLLQRVLKEQNITDLPALIAETEKLKACTFLINPNDDRFINPVHMSAEIQAACFEAGQPV PSRPAELARCIFDSLALLYADILSELASLRGKPFSQLHIVGGGCQNQLLNQLCADACGIT VVAGPIEASTLGNIGIQLMTLDELSNVDDFRSVVTANNSLTTFTPHPCHEIARYRAQFQQ KRLTKELCA >gi|333596726|gb|GL892086.1| GENE 147 186084 - 187343 1632 419 aa, chain + ## HITS:1 COG:ECs4830 KEGG:ns NR:ns ## COG: ECs4830 COG4806 # Protein_GI_number: 15834084 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Escherichia coli O157:H7 # 1 418 1 418 419 797 91.0 0 MTTQLEQAWDLAKQRFAAVGVDVEEALRQLDRLPVSMHCWQGDDVAGFENPGGSLTGGIQ ATGNYPGKARNATELRADLELALSLIPGPKRLNLHAIYLESDEPVARNEIKPEHFKNWVE WAKANKLGLDFNPSCFSHPLSADGFTLAHANDDIRQFWIDHVKASRRVSAYFGEQLGTPS VMNIWIPDGMKDITVDRLAPRQRLLAALDEAISEKLDPAHHIDAVESKLFGIGAESYTVG SNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLFVPRLLLHVSRPVRWDSDHVVL LDDETQAIASEIIRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPVAAL KQLEENGDYTARLALLEEQKSLPWQAVWEMYCQRHDAPAGSQWLDNVRAYEKGVLAARQ >gi|333596726|gb|GL892086.1| GENE 148 187440 - 188270 1277 276 aa, chain + ## HITS:1 COG:STM4045 KEGG:ns NR:ns ## COG: STM4045 COG0235 # Protein_GI_number: 16767311 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 538 92.0 1e-153 MQTITSSWFVQGMIKATSDAWLKGWDERNGGNLTLRLDDADIEPFAADFHQKPRYIALSQ PMPLLANTPFIVTGSGKFFRNVQLDPQANLGVVKVDSDGAGYHILWGLTDDAVPTSELPA HFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENNSDVFTRKLWEGSTECLVVFPDGV GILPWMVPGTDEIGQATATDMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAEVLVK VYSMGGMKQTITREELIALGKRFGVTPMQSALDLYQ >gi|333596726|gb|GL892086.1| GENE 149 188353 - 189339 1345 328 aa, chain + ## HITS:1 COG:AGl2685 KEGG:ns NR:ns ## COG: AGl2685 COG1879 # Protein_GI_number: 15891450 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 328 27 353 353 382 66.0 1e-106 MKIKASLILTVAALALSGSALAEVKIALVAKSLGNGFFEAANVGAQEAAKELGDVKVIYT GPTTTTAEAQIEVLNGLIAQGVDAIAISANDPDAVVPVLKKAMQRGIKVVSWDSGVAKAG RQIHLNPSNNALIGETNVKLAADALKALNVEKGDVAVLSATPTSTNQNTWIAEMKKVLPK YPSVNLVTVAYGDDLSDKSYREAVGLLKTYPDLKVIVSPSSVGIVAAAQAVKDQGKIGKV YVTGLGLPSEMAGAVKSGASKSFAIWNPIDLGYAATYLADDLVKGTATKDEASMGKLGKV KLDADGNGAMAEPFVYDASNIDKFSKIF >gi|333596726|gb|GL892086.1| GENE 150 189949 - 191451 1739 500 aa, chain + ## HITS:1 COG:SMc02325 KEGG:ns NR:ns ## COG: SMc02325 COG1129 # Protein_GI_number: 15964384 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Sinorhizobium meliloti # 1 499 1 498 503 576 59.0 1e-164 MTPLLQLSGITKVFPGVHALENVQLALWPGKVTALIGENGAGKSTLVKVMTGIYQPDEGE ILYKAIPVHLPTPESAHKMGITAIHQETVLFDELSVTENIFVGQYLHKGFLKKLDWPEMH RRAQAILTRLEVQIDPRATLKTLSIAQRHMVAIARALSFEAQVVILDEPTAALSQHEILE FYQIVERLKQEGKAILFISHKFDEIFELADHYTILRDGVFVGAGAINEITEERMVSMMVG RAITQTFPKIDCEKGETVLEVKNLCHPTEFAHISFSLRKGEILGFYGLVGAGRTELMQAL SGITQPSSGEIILNGQPRHFRQPADAIKAGIVCVPEERQKQGAIIALPIAQNISLPQLSR LNPNGVLHDDREWKLADEYAKRLQVKAFSWKQAVETLSGGNQQKVVIGKWLATHPDVIIL DEPTKGIDIGSKAAVHQFMSELVSQGLAVIMVSSELPEVMGMADRIIVMHEGLMVAEYQA GDATAETIVSAASGAKQEAA >gi|333596726|gb|GL892086.1| GENE 151 191452 - 192456 1518 334 aa, chain + ## HITS:1 COG:mll5704 KEGG:ns NR:ns ## COG: mll5704 COG1172 # Protein_GI_number: 13474747 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 2 326 1 325 325 314 56.0 1e-85 MLSSLLKHREALLGAVIVLMVVAIGSRVPSFIAPGNLVEMFNDTAILIVLALGQMMVLLT KGIDLSMAANLALTGMIVALINFHYPDVPVWALLILASALGLLMGAINGLLVWKLGIPAI VVTLGTMSIYRGMIFLLSGGGWVNSNQMGADFLGLPRASVLGLPVLSWCAIAALLLVGYF LRYSRTGRALYTAGGNATAAYYTGINAGKMQFISFCLSGLLAGFCGYLWISRFAVAYVDV ANGFELQVVAACVIGGISTMGGTGRVLGCLFGALFLGVINNALPVIGVSPFWQMAISGTV IVIAVLLNERGSKRKGRLILRDAALARQKLAVKS >gi|333596726|gb|GL892086.1| GENE 152 192465 - 193454 1287 329 aa, chain + ## HITS:1 COG:mll5703 KEGG:ns NR:ns ## COG: mll5703 COG1172 # Protein_GI_number: 13474746 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Mesorhizobium loti # 18 323 22 327 331 345 64.0 8e-95 MTSEAIKPTPAPGLFQRLLCWEGFLLAVTLAVFVVNALASPYFLNVWNLSDATFNFTEKA IIVLPMAMLIIAREIDLSVASTIALSSTVMGFCAAAGVDTPLLVCVGLGVGLLCGLFNGI LVTRFNLSSIVITIGTMSLYRGITYILLGDQALNSYPESFAWFGQGYVWGALSFEFALFI VLAALFAFVLHRTNFGRRTYAIGNNPTGAWYSGINVKRHNLLLFALVGLMSGLASVLLTS RLGSTRPTIAMGWELAVVTMAVLGGVNILGGSGSMVGVIIAAFLMGLVTFGLSLLNVPGI VMSVIIGAMLIVVISLPIITRRVMQRRRN >gi|333596726|gb|GL892086.1| GENE 153 193575 - 194723 1704 382 aa, chain + ## HITS:1 COG:STM4044 KEGG:ns NR:ns ## COG: STM4044 COG1454 # Protein_GI_number: 16767310 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 1 382 1 382 382 668 93.0 0 MSFMLALPKISLHGAGAIGDMVNLVANKQWGKALIVTDGQLVKLGLLDSLFTALDAHQMS YHLFDDVFPNPTEALVQKGFAAYQDAECDYIIAFGGGSPIDTAKAIKILTANPGPSTDYS GVGKVKNPGVPLVAINTTAGTAAEMTSNAVIIDSARQVKEVIIDPNIIPDIAVDDASVML DIPASVTAATGMDALTHAIEAYVSVGAHPLTDANALEAIRLINLWLPKAVDDGHNLEARE QMAFGQYLAGMAFNSAGLGLVHALAHQPGATHNLPHGVCNAILLPIIENFNRPNAVARFA RVAQAMGVDTRGMSDEAASMSAIQAIRDLSARVGIPSGFSQLGVTKADIEGWLDKALADP CAPCNPRTASRDEVRELYLEAL >gi|333596726|gb|GL892086.1| GENE 154 194720 - 195034 314 104 aa, chain + ## HITS:1 COG:yiiL KEGG:ns NR:ns ## COG: yiiL COG3254 # Protein_GI_number: 16131741 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 103 1 103 104 184 90.0 3e-47 MIRKAFVMQVNPDAHEEYARRHNPIWPELEAVLKAHGAHHYAIYLDKARNLLFATVEIES EERWNAVANTDVCQRWWKHMGDVMPSNPDNSPVSTELKEVFYLA >gi|333596726|gb|GL892086.1| GENE 155 195078 - 195626 585 182 aa, chain - ## HITS:1 COG:STM4042A KEGG:ns NR:ns ## COG: STM4042A COG1396 # Protein_GI_number: 16767308 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 182 7 188 188 305 88.0 3e-83 MTQPISVIAKSLVRERLRTGLSLAEIARRAGIAKSTLSQLESGNGNPSLETLWSLCVALD IPFARLLEPQQPVTQVIRRGEGTKVVAGQANYEAILLAACPPGARRDIYLLLTQPGADRI SQPHPPGSVEHIIVTQGRAMVGLIDAAEELGPGDYICYPADQPHIFKALEPDTHALLVAE QN >gi|333596726|gb|GL892086.1| GENE 156 195730 - 196389 886 219 aa, chain + ## HITS:1 COG:STM4042 KEGG:ns NR:ns ## COG: STM4042 COG1296 # Protein_GI_number: 16767307 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 293 87.0 2e-79 MKKHLSCLKGDTIKAIVLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSLTVLAGASEFMF IGIVASGGNPLAAAAAGLLVNARHVPFGVTVRELVGKRGLSFLGCHIMNDESVVFGLSQK TAEQRKAAYWLCGLGVAIIWPLGAVLGAMVGKLLPDPETIGLDAVFPAILLALVVPAFKN RTTLIRACSGAMLSLAAVPFAPVGLPVLLSLLGLAARKK >gi|333596726|gb|GL892086.1| GENE 157 196389 - 196712 484 107 aa, chain + ## HITS:1 COG:no KEGG:Ent638_4081 NR:ns ## KEGG: Ent638_4081 # Name: not_defined # Def: branched-chain amino acid transport # Organism: Enterobacter_638 # Pathway: not_defined # 1 107 1 107 107 142 93.0 4e-33 MENMTVFILGIAILSAGTYLMRLGGAKLGNRLALSERSQALLSDAATVLLFSVALATTFY EGEHFAGMARVLGVGFAVFLAWRKMPLIVVIVAAAVVTALLRLAGIH >gi|333596726|gb|GL892086.1| GENE 158 196755 - 197354 569 199 aa, chain - ## HITS:1 COG:no KEGG:CKO_03112 NR:ns ## KEGG: CKO_03112 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 11 199 18 203 203 201 52.0 2e-50 MSLNNVRQYALMFALLCGSTGLSGMAQADDGDCDMMSAVKKVDYGRYRKEDMRQASAEHV GKVYNGYASVTREFQVSALCPNARKMRISIDGAARQNMAYRFTDNGAMKIEFRDGRVDGI PVQLAAVDIGAVAVQGGASQVTLKPEKALAAVSGTEIAGEQFTATMMITTYLSDKAFNVT NTTDFVETLTLNVDTLPAH >gi|333596726|gb|GL892086.1| GENE 159 197345 - 199768 2233 807 aa, chain - ## HITS:1 COG:yhcD KEGG:ns NR:ns ## COG: yhcD COG3188 # Protein_GI_number: 16131106 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 18 806 7 792 793 568 40.0 1e-161 MLNGSCKKGMLVFCLSALAFNIRAEISSNANESLELARAIFDQDALKNNGLDPAIADYYA LAPRFTPGYHNVTVNLNGKQRNIMPVKFDEEGTPCIDKEFLENAGLIKQTKRGTCPKIHQ YWSGSTIQTSPDRGEISVVVPPEALDPDYGRQFAEVRGGRAAMLNYSMFGTHNRYDDDNA DRFQSTFEMGFNAGDWIVRSTQFISDGSDQDFDVESLYTYAQRTFTDYGVMVQGGQINVA NSRFSIPGIYGVQMMPDTALTPQAGTGVEVSGIARTPQARVDIRQGGQLIYSTLVPAGPF SLDDVPLANLNTDLNVTVTETDGSENRFTVSASTFRSNHVGRAPGFALAVGRVEDMDSRF ENPWVVSANNGWSINKRVNFLAGMVMADNHYYGFSGNLDTVPMQNLYASLGFLASIDNQS QTDGNKTTLDLGYSLPWGIGLSLGGSYGTPDYREMTELYGDDDDMSQTKYDTNVGINWSN ATLGRFSLSYYRNESWNSEYDSRRFISSWSQTFKYFNVSVNWESDVSRHDSSDNDQFYVN VSIPLGRSGVSTSSWYRESEGQASYGTRAMGSLNAENQYMVGVAQDHEENTTSWDSSLNS NLHYTNLALAAGGDNDNNTNFSASLSGGIVAHSDGVTFSPYRVSDTYAIARLDKPVAGIE IATSRGAVWTDKWGQAVVPALSPFRESTIEINTESLPGNLDVRNGRTAINASHGAVAKWE FATLSQRRVLLSIRRADGTPLPEGVSIVDAAGEYVTSAPEDGVIFLNDISATQQLYAKLD EGRCRLTYTLPEAEPNKFYEEVTGKCL >gi|333596726|gb|GL892086.1| GENE 160 199796 - 200482 628 228 aa, chain - ## HITS:1 COG:STM4573 KEGG:ns NR:ns ## COG: STM4573 COG3121 # Protein_GI_number: 16767814 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 1 226 9 233 235 175 42.0 5e-44 MLFLKRTLICACLLASFNSMAAGMVPDTSLRIVNEDEQGGSMDVKNTDAEAQLLYTKIID LPDDPKPGLIATQPVVRVDAGKTQRVRFVLKNSAEPLKVEHLKRVIFTAIPQREKNKVKV VFSQNLPVIIRPAGLAVNIEPWKALTWQIKNGNVTVENNTPYVVRIEQKVKLMASGTIAK LDKAYILPGEKMTARASAKISASEKQIEIYPATRYGYKAGTYIADLKQ >gi|333596726|gb|GL892086.1| GENE 161 200559 - 201263 580 234 aa, chain - ## HITS:1 COG:no KEGG:CKO_03115 NR:ns ## KEGG: CKO_03115 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 234 1 235 235 251 58.0 2e-65 MNAIFKKGVLASVLAVAASSAMAASSIDIQVTGKILPSSCTPAFISGGGIADFGTIKVAS LNSTTVTSLPDVKIIPISITCEDATRIAVTFNDAHADSAPTEDVPAWPDSDFATTMDYTA GLGMYNGKPIGTYSLGMQLTKGAVTNDAGDELYPTYSFNNGSTWGNKAGNRYLQLKTNKS EIYSFSSELGGTPVPQTKVNFNVGVVAAINPTNDLKITDEAKLDGLTNVELVYL >gi|333596726|gb|GL892086.1| GENE 162 201751 - 201963 261 70 aa, chain - ## HITS:1 COG:no KEGG:ECL_05087 NR:ns ## KEGG: ECL_05087 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 70 1 70 70 68 94.0 6e-11 MNSIKTFVAVIALATSFGSFAAQTVTASSSTLDGAEAKIAAQAQEAGASSYKITQAFTGN RVHMTAELNK >gi|333596726|gb|GL892086.1| GENE 163 202079 - 202888 746 269 aa, chain - ## HITS:1 COG:STM4038 KEGG:ns NR:ns ## COG: STM4038 COG1526 # Protein_GI_number: 16767303 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Salmonella typhimurium LT2 # 25 268 35 278 278 441 86.0 1e-124 MSPLPAGIVELSVHRPPHISHATPDFLAQEVPVALVYNGISHVVMMASPKDLELFAMGFS LSEGIIAHPQEIYGMDVVQACNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLN DIGKPIIPLPFTQTFNLAHLDRALEHLNDVQPIGQLSGCTHAAAWVSPSGDIAGGHEDVG RHVALDKLLGRRARESNVWQQGAALVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVA ERCNLTLVGFCKPGRATIYTHPQRLLVDQ >gi|333596726|gb|GL892086.1| GENE 164 203287 - 203874 620 195 aa, chain + ## HITS:1 COG:ECs4820 KEGG:ns NR:ns ## COG: ECs4820 COG0243 # Protein_GI_number: 15834074 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 195 1 195 1016 404 97.0 1e-113 MQVSRRQFFKICAGGMAGTTAAALGFAPGVALAETRQYKLLRTRETRNTCTYCSVGCGLL MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK WQQISWEEAFDRIAKLMKEDRDANFIAKNAEGTTVNRWLSTGMLCASASSNETGYLTQKF TRALGMLAVDNQARV >gi|333596726|gb|GL892086.1| GENE 165 203923 - 206337 2959 804 aa, chain + ## HITS:1 COG:STM4037 KEGG:ns NR:ns ## COG: STM4037 COG0243 # Protein_GI_number: 16767302 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 804 213 1016 1016 1555 91.0 0 MTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTASVADFY TPIRSGTDITFLSGVLLYLMTNEKYNREYTEAYTNASLIVREDYSFDDGLFSGYDAEKRK YDKTSWNYELDENGFAKRDTTLQHPRCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCE LIAETSAKDKTASFLYALGWTQHSIGAQNIRTMAMVQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLTGYMNLPNEKQTDLQTYLTASTPKPLLEGQVNYWGNYPKFFVSLMKAF YGDKATADNSWGFDWLPKWDKGYDVLQYFEMMHQGQVNGYICQGFNPVASFPNKNKVVES LSKLKFLVTIDPLNTETSTFWQNHGESNDVDPSKIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGIAMNDGEILAGIFLRLRKMYAAEGGATPEPVLNMTWNYSTPENPSPEE VAMESNGKALADVIDPATGTVLAKKGDQLSTFAHLRDDGTTSSGCWIFAGSWTPKGNQMA NRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGAKWGGVDIP DYSTAAPGSDVGPFIMQPEGMGRLFAIDKMAEGPFPEHYEPFETPLGTNPLHPNVVSNPA ARIFKSDFDALGKKDKFPYVGTTYRLTEHFHYWTKHALLNAIAQPEQFVEIGEKLANKLG IAHGDTVKVSSNRGYIKAKAVVTKRIRTLNVHGQQVDTIGIPIHWGYEGVAKKGFIANTL TPFVGDANTQTPEFKAFLVNVEKV >gi|333596726|gb|GL892086.1| GENE 166 206350 - 207252 1086 300 aa, chain + ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 300 1 300 300 594 92.0 1e-170 MAYQSQDIIRRSATNGFTPAPQARDHQQEVAKLIDVTTCIGCKACQVACSEWNDIRDEVG HNVGVYDNPADLTAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCADPGCLKACPSEGAIIQ YANGIVDFQSEQCIGCGYCIAGCPFDVPRMNPEDNRVYKCTLCVDRVNVGQEPACVKTCP TGAIHFGSKEDMKTLAAERVGELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL PENPEISATVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRAEEEDDNLHEEKDEVRK >gi|333596726|gb|GL892086.1| GENE 167 207249 - 207884 672 211 aa, chain + ## HITS:1 COG:ECs4818 KEGG:ns NR:ns ## COG: ECs4818 COG2864 # Protein_GI_number: 15834072 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 376 93.0 1e-104 MRKRDTIVRYTAPERINHWVTAFCFMLAAISGLGFFFPSFNWLMQILGTPQLARILHPFV GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII FLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA MVEGWVTSTWAKKHHPRWYREVRQKQEKSSE >gi|333596726|gb|GL892086.1| GENE 168 207881 - 208810 1180 309 aa, chain + ## HITS:1 COG:STM4034 KEGG:ns NR:ns ## COG: STM4034 COG3058 # Protein_GI_number: 16767299 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 590 93.0 1e-168 MSIRIIPQDELGSSEKRTAEYIPPLLFPRLKNLYNRRAERLRELAENNPLGDFLRFAALV AHAQEVVLYDHPLQMDLTARIKEASEQGKPPLDIHVLPRDKHWHKLLHSLIAELKPEMSG TALAVIENLEKASDQELEEMASALFASDFSLVSSDKAPFIWAALSLYWAQMASLIPGKAR AEYGEARQFCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRIKCSNCEQTRDLNY WSLENEDAAVKAESCGDCGTYLKILYQEKDPKVEAVADDLASLILDAKMEQEGFARSSIN PFLFPGEGE >gi|333596726|gb|GL892086.1| GENE 169 208852 - 209142 216 96 aa, chain - ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 13 94 1 82 84 128 87.0 2e-30 MEKALFERLTQSIAQMNEIAEGQREPSRTFQIDAMKIKEIRQASGLSQSKFANLISVSVD TLRNWEQGRRSPTGPAKALLRAIANDPQHVITALSQ >gi|333596726|gb|GL892086.1| GENE 170 209143 - 209454 58 103 aa, chain - ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 2 103 4 105 110 79 44.0 2e-15 MLFIETDIFTEDVKTLLDDDEYHRFQIFLATQPEYGDLIQNTGGLRKIRWLAGGKGKRGG VRVIYFHRTREFEIRLLLIYRKGIKDDLSAREKAILKKMIERW >gi|333596726|gb|GL892086.1| GENE 171 209603 - 210544 1131 313 aa, chain - ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 313 17 329 329 597 94.0 1e-170 MYHLRVPQTEEELDAYYHFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEEGNLVAVGR LYINADNEASIRFMAVHPSVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFSKL GFVNQGEITAPQTTPIRHFLMIKPIATLDDILHRADWCGQLQQAWYQHIPLSEKMGVRIQ QYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHI RYSAPISGKPSAVADLGALGGDLDRLARGRKARVQMQVELFGDETPGAVFEGTYIVLPAK PYGAYEEGGNEEE >gi|333596726|gb|GL892086.1| GENE 172 210589 - 211026 378 145 aa, chain - ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 272 97.0 2e-73 MIALIQRVTRASVTVEGEVTGEIGPGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGAAPDRAEALYEYFVERCRQQDMNT QTGRFAADMQVSLVNDGPVTFWLQV >gi|333596726|gb|GL892086.1| GENE 173 211023 - 211904 811 293 aa, chain - ## HITS:1 COG:STM4027 KEGG:ns NR:ns ## COG: STM4027 COG1295 # Protein_GI_number: 16767292 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 293 1 290 290 483 88.0 1e-136 MLKTVHQKANHHTRPLRAWLKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSA FPMFADVSMQLRHFVFANFIPATGDVIQNYIEQFVANSSKMTAVGACGLIVTALLLMYSI DSALNTIWRSKKVRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWATDLNSVIDNV LRIFPLILSWLSFWLLYSVVPTTRVPNRDAVVGALVAALLFELGKKGFALYITMFPSYQL IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGVYRELKKAAEAEKQQEADQP >gi|333596726|gb|GL892086.1| GENE 174 211898 - 212497 635 199 aa, chain - ## HITS:1 COG:STM4026 KEGG:ns NR:ns ## COG: STM4026 COG1011 # Protein_GI_number: 16767291 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 199 1 199 199 356 84.0 2e-98 MLYIFDLGNVIVDIDFNRVLGAWSDFSRVPLATLKQNFAMGETFHLHERGEISDEAFAER FCQEMGLSLSYEQFSHGWQAVFVAIRPEVIDIMHKLRAQGHRVVVLSNTNRLHTTFWPDE YPEIHAAADKVYLSQEMGMRKPEARIYQAVLQEEGFTAADAVFFDDNADNIEGANQLGIT SILVTGKETIPNYFAKQLC >gi|333596726|gb|GL892086.1| GENE 175 212616 - 213416 910 266 aa, chain - ## HITS:1 COG:STM4025 KEGG:ns NR:ns ## COG: STM4025 COG1349 # Protein_GI_number: 16767290 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 258 1 258 267 431 87.0 1e-120 MSLTELTGNPRHDQLLTLIADRGYMNIDELAQLLDVSTQTVRRDIRKLSEQGLITRHHGG AGRASSVVNTAFEQREVSLTEEKRAIAEAIADYIPDGSTIFITIGTTVEHVARALLNHNH LRIITNSLRVAHILYKNPRFEVMVPGGTLRPHNGGIIGPAATAFVSGFRADYLVTSVGAI EHDGEMMEFDVNEASVVKTMMAHSRHILLAADHTKYHASAAVEIGNVAQATALFTDELPG SVLQNHLKSSKVEVVEVNSGEEQQAG >gi|333596726|gb|GL892086.1| GENE 176 213451 - 214380 809 309 aa, chain - ## HITS:1 COG:STM4024 KEGG:ns NR:ns ## COG: STM4024 COG0524 # Protein_GI_number: 16767289 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 12 309 1 298 298 448 78.0 1e-126 MKASEIAEGITMTRIVCVGITVLDRIWYLDDLPKEGGKYVAKDYTEVGGGPAATAAVAAA KLGAEVDFIGRVGDDDTGRRLLAELESLGVNTRYTRVFKGARSSQSAVLVDAGGERVIAN YPSPDLPVAADWLHEIDFSQWDIVLADVRWHDGAKQAFTLARQQGVPTLLDADVTPQDIA ELIALSDHAAFSAPGLRRLTQRDETEDALKKAQTLTNGHVYVTQGRDGCFWLEKGALRHQ PGFDVDVVDTTGAGDVFHGAMAVSLGQQLPAADAVRFASAVAALKCTKPGGRAGIPDCDQ TRSFLSLFV >gi|333596726|gb|GL892086.1| GENE 177 214503 - 215393 1152 296 aa, chain + ## HITS:1 COG:STM4023 KEGG:ns NR:ns ## COG: STM4023 COG2084 # Protein_GI_number: 16767288 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 292 1 292 298 481 87.0 1e-135 MSAIAFIGLGQMGAPMAKNLLKQGHQLNVFDVNPQAVQALVESGARAAATPAQAATDAEF VITMLPNGDLVRSVLFGEHGVCEGLSRDALVIDMSTIHPLQTDALIRDMAERGFSLMDVP VGRTSDHAIAGTLLLLAGGTAPQVERATPVLMAMGNELINAGGPGMGIRVKLINNYMSIA LNALSAEAAVLCEALGLSFDVALKVMSGTPAGKGHFTTSWPNKVLKGDLSPAFMIDLAHK DLGIALDVANQLHVPMPLGAASREVYNQARAAGRGREDWTAILEQVRASAGLKKSH >gi|333596726|gb|GL892086.1| GENE 178 215417 - 216286 1024 289 aa, chain + ## HITS:1 COG:STM4022 KEGG:ns NR:ns ## COG: STM4022 COG3684 # Protein_GI_number: 16767287 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 2 289 4 291 292 483 85.0 1e-136 MYTLKDITRPSGGFAMLAVDQREAMRLMFAAAGAPVPVTDQHLTDFKVNAAKILSPYASA ILVDQQFCYRQIVEQQAVAKSCAMIVAADEFIPGNGIPVDSVVIDKNIDAQAVKRDGGKA LKLLVLWRSDEDPQQRLEMVKAFNTLCHDNGLLSIIEPVVRPPRRGAAFDREQAIIDAAK ELGDSGADLYKVEMPLFGKGTQQELLAASQKLNENIAMPWVILSSGVDDKLFPRAVSVAM QAGASGFLAGRAVWSSVIGLPDTELMLRDISVPKLQRLGEIVDEMMARR >gi|333596726|gb|GL892086.1| GENE 179 216301 - 217542 1716 413 aa, chain + ## HITS:1 COG:STM4021 KEGG:ns NR:ns ## COG: STM4021 COG2942 # Protein_GI_number: 16767286 # Func_class: G Carbohydrate transport and metabolism # Function: N-acyl-D-glucosamine 2-epimerase # Organism: Salmonella typhimurium LT2 # 1 413 1 413 413 758 89.0 0 MKWFNTLSHNRWLEQETDRILDFGKNAAVPTGFGWLGNNGQVRSDMGTHLWITARMLHVY AVAANMGRPGAYALVEHGINALNGPLRDKQHGGWYACVNDEGVVDASKQGYQHFFVLLGA ASAVTTGHPEARKLLDDAIEVIERYFWSEQEQMCLESWDEAFSKTEDYRGGNANMHAVEA FLIVYDVTHDRKWLDRALRIASVIIHDVARKGEYRVNEHFDTNWNPIRDYNIDNPAHRFR AYGGTPGHWIEWGRLMLHLRAALEARFETPPEWLLEDAKGLFHATIRDAWAPDGADGFVY SVGWDGKPIVRERVRWPIVEAMGTAYALYTVTGEAQYEAWYQKWWDYCIKYLMDYENGSW WQELDTNNEVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDSQAK >gi|333596726|gb|GL892086.1| GENE 180 217559 - 219583 2606 674 aa, chain + ## HITS:1 COG:ECs4800 KEGG:ns NR:ns ## COG: ECs4800 COG1501 # Protein_GI_number: 15834054 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 4 674 8 678 678 1205 84.0 0 MRTLHNINLKNNEHGFTLSWENRLILSHSADAPCLWIGAGEADIEMFRGNFSIKDKLNEK IALTDATVTQQSAGWAIRFTRGDAVSATLLVGVDGEGRLELKLKNDAASHNRIWLRLAAQ PDDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTFFPQ PTFVSTQKYYCHVDNSCYMNFDFSEPDFHELAFWEDNATLRFECAETYVDLLEKLTGLLG RQPELPDWVYDGVTLGIQGGTDVCQQKLDAMRQGGVKVNGIWAQDWSGIRMTSFGKRVMW NWKWNSELYPQLDERIGQWKQEGVQFLSYINPYVASDKDLCEEASKRGYLTKNADGEDYH VEFGEFYAGVIDLTNPEAYGWYKEVIKKNLIELGCGGWMADFGEYLPTDTFLHNGVSAEI MHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGSQKHSVMMWAGDQNVDWSLDDGLA SVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGD NWQFDGDAETIAHFARMTTVFTTLKPYIKAAVAQNAKSGLPVMRPLFLHYEDDARAYTLK YQYLFGRDLLVAPVHEEGRRDWTLYLPQDSWVNAWTGETCQGGDVTVDAPIGKPPVFYRQ HSEWADLFSTLRHI >gi|333596726|gb|GL892086.1| GENE 181 219629 - 221011 1867 460 aa, chain + ## HITS:1 COG:STM4018 KEGG:ns NR:ns ## COG: STM4018 COG2211 # Protein_GI_number: 16767283 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 1 459 1 459 460 820 93.0 0 MSQHTSDPATLRLPFKEKLAYGMGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLI AKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEITGKTVM ATVLFMLYGLFFSMMNCSYGAMVPAITKNPDERASLAAWRQGGATLGLLLCTVGFVPVMN LIEGNDQLGYIFAATLFSLFGLFFMWWCYKGVTERYVETQPANPAQKPGLLQSFRAIAGN RPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFMMPGAV RRFGKKKVYISGLTIWVAGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVE YGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGIMLTQIGYVPNVVQSAGTVEGLRQLI FIYPSLLAVITIVAMGCFYNLNEKMYVRIVEEIELRKRTA >gi|333596726|gb|GL892086.1| GENE 182 221055 - 222479 1693 474 aa, chain + ## HITS:1 COG:STM4017 KEGG:ns NR:ns ## COG: STM4017 COG2211 # Protein_GI_number: 16767282 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 4 474 3 471 473 788 85.0 0 MTHNSDPLTLKLSLREKCAYGMGDFGSNLMLCIGTLYLLKFYTDELGMPAFYGGIIFLVA KFFTAFTDMLTGVLLDSRRNIGARGKFRPFILYASVPVALVATAQFMANDFSLTVKTALA TVLFMMFGLCYSLMNCAYGAMVPAITKNPNERAQLAAWRQGGATVGLLLCTVGFMPIQAL FVSQPSLGYLVAALVFVTGGLFCMWWCYSGVKERYVELTPDHHKPGILKSFCAIFRNPPL LVLCIANLCTLAAFNIKLAIQVYYTQYVLNDLHLLSWMGFFSMGCILIGVFLVPGAVKRF GKKPVYLGGLTLWAVGDVLNFFWGTSSLLFVLFSCMAFFGTAFVNSLNWALVPDTVDYGE WKTGIRAEGSVYTGYTFSRKISAALAGFLPGIMLTQIGYVPHAVQSAGTLLGLRQLIFLW PCGLAIVAAVTMGLFYKLNEARFAFIIEEIGKRKKQTANTPEITTNNKASAVTL >gi|333596726|gb|GL892086.1| GENE 183 222497 - 223240 852 247 aa, chain + ## HITS:1 COG:no KEGG:ECL_05109 NR:ns ## KEGG: ECL_05109 # Name: not_defined # Def: putative porin # Organism: E.cloacae # Pathway: not_defined # 20 247 1 228 228 434 99.0 1e-120 MSFLFIRREAFLYLIHGQIMKRIITVLIVSSVSCPVFAGAYVETREAYNTASELHEVILR AGYNFDMGAGLMFTNAYNVGKWDELKHSYNEIEGWYPLFKPTDKLTFQPGGLINDSSAGS GGAVYLDTNYKFTDWFNLTFRYRYNHNNYDTPDYNGQMDKNDTHEFANYWNFKVTDAFFY TFEPHFFQRVNDYHSKNGKDHHWEITNKFSYKIDRNWLPYLELQWLDRWNDYNREQYRIR LGLRYSF >gi|333596726|gb|GL892086.1| GENE 184 223320 - 225143 2150 607 aa, chain - ## HITS:1 COG:STM4009 KEGG:ns NR:ns ## COG: STM4009 COG1217 # Protein_GI_number: 16767274 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Salmonella typhimurium LT2 # 1 607 1 607 607 1164 96.0 0 MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKN TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA EDMTPLYQTIVDRVPAPNVDLEGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTII DSEGKTRNGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPAL SVDEPTVSMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALG ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV GQRNNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG KKLTNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKRA MRGAKEE >gi|333596726|gb|GL892086.1| GENE 185 225521 - 226930 1586 469 aa, chain + ## HITS:1 COG:STM4007 KEGG:ns NR:ns ## COG: STM4007 COG0174 # Protein_GI_number: 16767272 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Salmonella typhimurium LT2 # 1 469 1 469 469 928 95.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG INESDMVLMPDATTALIDPFYEEPTLIIRCDILEPGTLQGYDRDPRSIAKRAEEYLRSTG IADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGY FPVPPVDSSQDIRSTMCLIMEEMGLVVEAHHHEVATAGQNEIATRFNTMTKKADEIQIYK YVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSKNGTNLFSGDKYAGLSEQALHYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVR FPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALQ ALDADREFLTAGGVFTDEAIDAYIALRTEENDRVRMTPHPVEFELYYSV >gi|333596726|gb|GL892086.1| GENE 186 227098 - 228147 1231 349 aa, chain + ## HITS:1 COG:ECs4791 KEGG:ns NR:ns ## COG: ECs4791 COG3852 # Protein_GI_number: 15834045 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 619 92.0 1e-177 MATGTLPDAGQILNSLINSILLVDDELAVHYANPAAQQLLAQSARKLFGTPLPELLSYFS LNIGLMQESLQAGQGFTDNEVTLVIDGRSHILSLTAQRLPDGMILLEMAPMDNQRRLSQE QLQHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLTKALPDPALAEYTNVIIEQADRLRN LVDRLLGPQQPGMHVSESIHKVAERVVKLVSMELPDNVTLVRDYDPSLPELAHDPDQIEQ VLLNIVRNALQALGQEGGEIILRTRTAFQLTLHGVRYRLAARIDVEDNGPGIPPHLQDTL FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVFLPIKK >gi|333596726|gb|GL892086.1| GENE 187 228159 - 229571 1330 470 aa, chain + ## HITS:1 COG:ECs4790 KEGG:ns NR:ns ## COG: ECs4790 COG2204 # Protein_GI_number: 15834044 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 470 1 469 469 869 94.0 0 MQRGIVWVVDDDSSIRWVLERALTGAGLSCTTFESGSEVLDALTTKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS HYQEQQQPRHAPDFGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA LHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHR LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKQLHPETDAALTRLAWPGNVRQL ENTCRWLTVMAAGQEVLIQDLPAELFEATVPESTAGHALPDSWATLLAQWADRALRSGHQ NLLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|333596726|gb|GL892086.1| GENE 188 229893 - 231266 1653 457 aa, chain - ## HITS:1 COG:ECs4789 KEGG:ns NR:ns ## COG: ECs4789 COG0635 # Protein_GI_number: 15834043 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 457 3 459 459 868 91.0 0 MSVPSIDWDLALIQKYNYSGPRYTSYPTALEFSDAFGEADFQQAVARYPERPLSLYVHIP FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAPLFKGRHVSQLHWGGGTPTYLNK AQISRLMALLRGNFRFNDDAEISIEVDPREIELGVLDHLRAEGFNRLSMGVQDFNKEVQR LVNREQDEAFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVF NYAHLPTLFAAQRKIKDADLPSAQQKLDILQETIASLTETGYQFIGMDHFARPDDELAIA QRDGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKLYYQQVDETGNALWRG IALTRDDCIRRDVIKALICNFRLDFSDVEAQWDLQFSDYFAEDLKLIAPLAKDGLVDVSE SAIVVTPKGRLLIRNICMCFDAYLRQKARLQQFSRVI >gi|333596726|gb|GL892086.1| GENE 189 231455 - 231970 624 171 aa, chain - ## HITS:1 COG:STM4003 KEGG:ns NR:ns ## COG: STM4003 COG3078 # Protein_GI_number: 16767268 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 167 80.0 1e-41 MKKPTSAAGAKRPAKARRKTREELNQEARDRKRDKKHRGHASGSRANGGGAAGASAKGKQ QKDPRIGSKTPIPLGVTDTPVTKQHKPKSEKPMLSPQAELDMLENDERLDALLERLEEGE TLTAEEQSWVDAKLDRIDELMQKLGLSYDDEEDEEEDEKQEDMMRLLKGGN >gi|333596726|gb|GL892086.1| GENE 190 232551 - 233180 760 209 aa, chain + ## HITS:1 COG:ECs4787 KEGG:ns NR:ns ## COG: ECs4787 COG0218 # Protein_GI_number: 15834041 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 207 1 207 210 359 88.0 2e-99 MTTWNYQQTHFVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPG RTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRH PLKDLDQQMIDWAVASDIAVLVLLTKADKLASGARKAQVNKVREAVLAFNGDVQVEPFSS LKKQGVDKLRQKLDCWFNDLEPATEAEAE >gi|333596726|gb|GL892086.1| GENE 191 233493 - 236285 3127 930 aa, chain - ## HITS:1 COG:polA_2 KEGG:ns NR:ns ## COG: polA_2 COG0749 # Protein_GI_number: 16131704 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Escherichia coli K12 # 289 930 1 640 640 1118 89.0 0 MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYHPTHAAV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKTMAGKLADNK EVAYLSYQLATIKTDVELELTCEQLEVQEPAADELLGLFRKYEFKRWTADVEAGKWLQAK GAKPAAKPKETIVVDAEEQAEEEAIALSFDNYETVLEESQLVAWIEKLKKAPVFAFDTET DSLDNISANMVGLSFATEPGVAAYVPVAHDYLDAPEQISRERALELLKPILEDEKALKVG QNLKYDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEEIAG KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKHEGPLNVFQNIEMPLVPVLS RIERNGVKIDPTVLHNHSGELAQRLTELEQKAHELAGEAFNLSSPKQLQTILFEKQGIKP LKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTS YHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLS RDQGLLTAFAEGKDIHRATAAEVFGLPLESVTNEQRRSAKAINFGLIYGMSAFGLSRQLN IPRKESQKYMDLYFERYPGVLEYMERTRAQAKEKGYVETLDGRRLYLPDIKSSNAARRAG AERAAINAPMQGTAADIIKRAMIAVDAWLEKEKPRVKMIMQVHDELVFEVHKDDLETVSG KIHELMENSMKLDVPLLVEVGSGENWDQAH >gi|333596726|gb|GL892086.1| GENE 192 236217 - 236447 101 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRPIQIRRAIDEYKWVFWDLNHNVRAFYEFMGKGCHRRMKTSGFSALYRKRFCDREDRS QNKTVDKFVHIFNTGE >gi|333596726|gb|GL892086.1| GENE 193 236888 - 237634 680 248 aa, chain + ## HITS:1 COG:STM3998 KEGG:ns NR:ns ## COG: STM3998 COG0204 # Protein_GI_number: 16767263 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Salmonella typhimurium LT2 # 1 248 55 302 302 455 85.0 1e-128 MYCWCEGLAILLHLNPWLKWDVQGLEKLNKKNWYLLICNHHSWADIVVLCVLFRKHIPMN KYFLKQQLAWVPFIGLACWALDMPFMKRYSRSYLLRHPERRGKDVETTRRSCEKFRAHPT TIVNFVEGSRFTEEKRQQTRSPYQNLLPPKAAGIAMALNVLGEQFDKLLNVTLCYPENDR TPFYDMLSGKLTRIVVHVDLVAVNTELHGDYVNDKNFKRRFQLWLNTLWKEKDEQIAQVK SSYKNAGQ >gi|333596726|gb|GL892086.1| GENE 194 237657 - 238280 887 207 aa, chain - ## HITS:1 COG:STM3997 KEGG:ns NR:ns ## COG: STM3997 COG0526 # Protein_GI_number: 16767262 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 369 89.0 1e-102 MKKIWLALAGMILAFSATAAQFTDGKQYITLDKPVAGEPQVLEFFSFYCPHCYEFEQVLH VSDNVKKKLPEGTKMTKYHVEFLGPLGKDLTQAWAVAIALGVEDKITAPMFEAVQKTQTV QTTADIRKVFVDAGVKGEDYDAAWNSFVVKSLVAQQEKAAADFQLQGVPAMYVNGKYQVN TRGMDTTSMDIFVQQYADTVKYLVEKK >gi|333596726|gb|GL892086.1| GENE 195 238308 - 239294 657 328 aa, chain - ## HITS:1 COG:ECs4782 KEGG:ns NR:ns ## COG: ECs4782 COG2334 # Protein_GI_number: 15834036 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 550 80.0 1e-156 MNDQAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEERQRFVVKFYRPQ RWSAEQIQEEHQFAHDLLVDDVPVAAPLKFNNQTLLTHQGFYYAVFPSLGGRQFEADNID QMEWVARYLGRIHQTGRKKTFVARPTIGVQEYLIEPRQVFDTSALIPNALKGHFLTATDK LIDAVKACWRDDIAALRLHGDCHAGNILWRDGPLFVDLDDARMGPAVQDLWMLLNGDKAE QRMQLETIIEAYEEFSPFNSDEIALIEPLRAMRFVYYLAWLIRRWEDPAFPRNFPWLTGE DYWRNQISTFTEQVKVLQEPPLQLTPMY >gi|333596726|gb|GL892086.1| GENE 196 239370 - 239639 345 89 aa, chain - ## HITS:1 COG:ECs4781 KEGG:ns NR:ns ## COG: ECs4781 COG3084 # Protein_GI_number: 15834035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 155 95.0 2e-38 MKCKRLNEVIELLQPAWQKEPELNLMQFLQKLAKESGFDGELADLSDDILIYHLKMRDSA KDAVIPGIQKDYEEDFKTALLRARGVIKE >gi|333596726|gb|GL892086.1| GENE 197 239657 - 239878 105 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPVSADRHRRHLICQRISNMLPQGGIVQELKTLILSAHSRCPAPGQNDPDDFLALIHEYR LFYCGIDPANVSL >gi|333596726|gb|GL892086.1| GENE 198 239765 - 240292 368 175 aa, chain + ## HITS:1 COG:mobA KEGG:ns NR:ns ## COG: mobA COG0746 # Protein_GI_number: 16131698 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Escherichia coli K12 # 1 175 20 194 194 253 68.0 2e-67 MGGKDKGLQLLNNTPLWQHVADTLANQVSSMAISANRHIDIYQRSGYPVYQDNLVDYPGP LAGMLSVMQQSHGEWFLFCSCDTPFIPSCLVERLVQRRDGAPVVWVHDGERDHPTIALMN RSLIPVLEDYLAAGERRVMVFMRQSGGHSVDFSDMKSAFVNVNTTEDLKMMQVKK >gi|333596726|gb|GL892086.1| GENE 199 240415 - 240792 396 125 aa, chain + ## HITS:1 COG:STM3993 KEGG:ns NR:ns ## COG: STM3993 COG1763 # Protein_GI_number: 16767258 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Salmonella typhimurium LT2 # 1 122 43 164 171 179 77.0 2e-45 MDVDKPGKDSYELRKAGAAQTMVASNQRWALMTETPDEAPLDLAYLVSRMDHSTLDLVLV EGFKHEAVAKILLFRSDAGHDVSELTLDEHVIAVASDIALTLEVPVLNLNDVEGIAEFIV TWSMQ >gi|333596726|gb|GL892086.1| GENE 200 244636 - 245343 726 235 aa, chain + ## HITS:1 COG:STM3888 KEGG:ns NR:ns ## COG: STM3888 COG2186 # Protein_GI_number: 16767172 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 234 1 234 234 402 85.0 1e-112 MPLSAQQLAAQKNLSYVLAEKLAQLILAGKYAPGSILPSEMELGEQFGVSRTAVREAVKT LTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEDNFNQVVDHFLVMRSSLEPQACL LAATLGTAEQKAQLNTLMEEMVDLKKHFNRERWIEVDMAWHEHIYNMSANPFLTSFASLF HSVYHTYFTSITQDEVVKLDLHQAIVDAIQESDGQRALSACQALLAAPTHQQVNK >gi|333596726|gb|GL892086.1| GENE 201 245340 - 246773 1579 477 aa, chain + ## HITS:1 COG:STM3887 KEGG:ns NR:ns ## COG: STM3887 COG0477 # Protein_GI_number: 16767171 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 477 1 475 475 757 88.0 0 MTEKKARSMAGLPWIAAMAFFMQALDATILNTALPAIAQSLNRSPLAMQSAIISYTLTVA MLIPVSGWLADRFGTRKVFMLAVTLFTLGSLACALSTSLTELVVFRVLQGIGGAMMMPVA RLALLRAYPRSELLPVLNFVTMPGLVGPILGPVLGGVLVTWASWHWIFLINIPIGVAGLI YARKYMPNFTTPRRSFDMGGFFLFGLSLVLFSSGMELFGEKIVATWLALAVILSGILLFL LYIRHARRHPTPLISLSLFNTRTFSVGIAGNIASRLGTGCVPFLMPLMLQVGFGYPALIA GCMMAPTAMGSILAKSTVTQVLRWFGYRKTLVGVTVFIGLMIAQFSLQSAALPIWMLILP LFVLGMAMSTQFTSMNTITLADLTDENASSGNSVLAVTQQLSISLGVAVSAAVLRFYEGF DGTNTVEQFHYTFITMGALTVVSAVVFMLLKPKDGRNLIKERHKEKAKPNRVPSEQE >gi|333596726|gb|GL892086.1| GENE 202 246739 - 247722 1016 327 aa, chain - ## HITS:1 COG:STM3886 KEGG:ns NR:ns ## COG: STM3886 COG1609 # Protein_GI_number: 16767170 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 327 4 332 332 588 89.0 1e-168 MKDVARMAGVSTSTVSHVINNDRFVSEAIREKVDAAIKELNYAPSALARSLKLNQTRTIG MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC TETHQPSKEIIQRYPSIPTVMMDWAPFDGTSDLIQDNSLLGGDMATQHLIDKGHTRIACI TGPLDKTPARLRLEGYLSAMERAGLAIPDGYRITGDFEFNGGFEAMQKLLAQEPRPQAVF IGNDAMAFGAYQALYQAGLRVPDDMAIVGYDDIELARYMTPPLTTIHQPKDELGELAIDV LIHRMAQPTLQQQRLQLTPVLMERGSV >gi|333596726|gb|GL892086.1| GENE 203 247735 - 248664 955 309 aa, chain - ## HITS:1 COG:STM3885 KEGG:ns NR:ns ## COG: STM3885 COG0524 # Protein_GI_number: 16767169 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 438 82.0 1e-123 MKTAGNLVVLGSINADHILNLETFPTPGETVTGNQYQVAFGGKGANQAVAAGRSGANIAF IACTGDDDTGERVRKQLASDNIVIAPVSVVAGESTGVALIFVNAEGENVIGIHAGANAAL TTERVEAQRGIIAGAEALLMQLESPVESVLAAAKIAHENHTSVVLNPAPARVLSDELLAL VDIITPNETEAEKLTGIRVENDDDAARAAFALHEKGIGTVIITLGSRGVWASVNGEGRRV PGFKVKAIDTIAAGDTFNGALVTALLEGKAMDDAIRFAHAAAAIAVTRKGAQPSVPWRKE IDEFLSQQG >gi|333596726|gb|GL892086.1| GENE 204 248773 - 249663 1083 296 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 486 97.0 1e-137 MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV VLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQAKIPVITLDRQATKG DVVSHIASDNVLGGKIAGDYISKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFN VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD GTPDGEKAVNDGKLAATIAQLPEQIGATGVQTADKVLKGEKVQAKYPVDLKLVIKQ >gi|333596726|gb|GL892086.1| GENE 205 249691 - 250656 1252 321 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 473 97.0 1e-133 MTTQAVSGRRYFTKAWLMEQKSLIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMA VGMTLVILTSGIDLSVGSLLALTGAIAASIVGIEVNALVAVAAALAAGAAIGAVTGVIVA KGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMA IVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVA RLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSY YQMIVKAVVILLAVLVDNKKQ >gi|333596726|gb|GL892086.1| GENE 206 250661 - 252211 2159 516 aa, chain - ## HITS:1 COG:rbsA KEGG:ns NR:ns ## COG: rbsA COG1129 # Protein_GI_number: 16131617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 16 516 1 501 501 941 97.0 0 MRISFSVLASPSEAIMDALLQLKGIDKSFPGVKALSGAALNVYSGRVMALVGENGAGKST MMKVLTGIYQRDAGSLLWLGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGRE FVNRFGKIDWKTMYAEADKLLAKLNLRFKSDRLVGDLSIGDQQMVEIAKVLSFESKVIIM DEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREV ATLTEDSLIEMMVGRKLEDQYPRLDKAPGEIRLKVDNLCGPGVNDVSFTLRQGEILGVAG LMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGM SVKENMSLTALRYFSRSGGSLKHKDEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVA IARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRI IVMHEGHLGGEFTREQATQEVLMAAAVGKLNRVNQE >gi|333596726|gb|GL892086.1| GENE 207 252174 - 252593 429 139 aa, chain - ## HITS:1 COG:rbsD KEGG:ns NR:ns ## COG: rbsD COG1869 # Protein_GI_number: 16131616 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Escherichia coli K12 # 1 139 13 151 151 236 91.0 6e-63 MKKGTVLNSEISSVISRLGHTDTLVVCDAGLPVPRSTTRIDMALTQGVPSFMQVLEVVTA EMQVEAAILAAEIKQHNPQLHETLLSHIEQLQQHQGNTIEIRYTTHEQFKQQTADSQAVI RSGECSPYANIILCAGVTF >gi|333596726|gb|GL892086.1| GENE 208 252790 - 254658 2315 622 aa, chain - ## HITS:1 COG:ECs4689 KEGG:ns NR:ns ## COG: ECs4689 COG3158 # Protein_GI_number: 15833943 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Escherichia coli O157:H7 # 1 622 1 622 622 1112 92.0 0 MSTDNKQSLPAVTLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLL ILVVSLKYLSFVMRADNAGEGGILTLMSLAGRNTSARMTSVLVIIGLIGGSFFYGEVVIT PAISVMSAIEGLEIVAPQLDTWVVPLAIIVLTLLFAIQKHGTGLVGKLFAPIMLAWFLIL AALGLRSIIANPDVLHALNPMWAVHFFLEYKVVSFVALGAVVLSITGVEALYADMGHFGK LPIRVAWFSVVLPSLVLNYFGQGALLLAHPEAIKNPFFLLAPDWALVPMLILATLATVIA SQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWLLYFAVVIVIVSFEHS SNLAAAYGIAVTGTMVLTSILSTTVAYRNWHWNKFLVGLILVGFLCIDVPLFSANLDKIV SGGWLPLTLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYM SRALNVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASY GWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLIIGKRPWYLRLRGKLYLILQRNAL RAPDQFEIPPNRVIELGTQVEI >gi|333596726|gb|GL892086.1| GENE 209 254881 - 256377 1435 498 aa, chain + ## HITS:1 COG:STM3879 KEGG:ns NR:ns ## COG: STM3879 COG0714 # Protein_GI_number: 16767163 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Salmonella typhimurium LT2 # 1 498 1 498 498 811 84.0 0 MAHSHLLAERISRLSSALEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK FAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTAGYLPEAEIVFLDEIWKAG PAILNTLLTAINERRFRNGASEEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV QDKSNFRSMLVSQQDENENPVAASLQVTDEEYHQWQEEIGKIKLPDAVFELIFMLRQQLD LLPSAPYVSDRRWKKAIRLLQASALFSGRDAVAPVDLILLKDCLWHDAEGMNLMQQQLDV LMTGHAWGQQSMLNQLGAIAQRRLQLQQQQSDKTALKVNRLGGMFARKPHYELPAELTDA SLTLLLQQPLKLHDMQVVHVTIERVALVQWLDKGGEIRGKLNGIGFAQPLSMEVDSSQHL VIRDVSLQGSRLALPGTASDTLPEEIKQQLEALDNEWHQQHTRFSEQQKCLFIHSDWLGR IEASLQDVSAQIKQARQC >gi|333596726|gb|GL892086.1| GENE 210 256371 - 257822 1088 483 aa, chain + ## HITS:1 COG:STM3878 KEGG:ns NR:ns ## COG: STM3878 COG2425 # Protein_GI_number: 16767162 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Salmonella typhimurium LT2 # 10 473 1 464 474 754 83.0 0 MLTLDTLNVMLAVSEEGLIEEVVITLLASPQLAAFFEKFPKLRKAMTDDLPRWRDNLRQR FKETEVPPELTEEVAGYQQCQRLSTPQFIAQLQQTLTLLDNVHSPFASQARALVTDNPSF TPALHTLFLQRWRLSLVVQATALNQQLLDEEREQLLSEVQERMTLSGQLEQVLVENENAA GRLWDMSAGQLKRGDYQLIVKYGDFLAQQPELMKLAEQLGRSREARSVPKKDAPMETFRT LVREPSTVPEQVDGLQQSDDILRLLPTELSTLGMTELEYEFYRRLVEKQLLTYRLHGEAW REKISQRPVVHQDFDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRVALADRRRCYI MLFSSEVVGYELTSPQGLEQAIRFLSQRFRGGTDLASCFRSIIERMQGGDWYDADAVVIS DFIAQRLPDDVVSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGLRSRLLRR WRR >gi|333596726|gb|GL892086.1| GENE 211 257823 - 258815 1107 330 aa, chain - ## HITS:1 COG:ECs4686 KEGG:ns NR:ns ## COG: ECs4686 COG2502 # Protein_GI_number: 15833940 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 603 91.0 1e-172 MKTAYIAKQRQISFVKSHFSRQLEEKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK TLPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPIHSVYVDQWDWE RVMGDGERHVGTLKSTVEAIYAGIKATEAAVSKEFGLAPFLPETIHFVHSQELLSRFPDL DAKGRERAIAKELGAVFLIGIGGKLSDGKRHDVRAPDYDDWSTVGESEYAGLNGDILVWN PVLEDAFELSSMGIRVDAEALKRQLAVTGDEDRLQLEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLSHIGQVQCGVWPQQVRESVGSLL >gi|333596726|gb|GL892086.1| GENE 212 258967 - 259425 579 152 aa, chain + ## HITS:1 COG:ECs4685 KEGG:ns NR:ns ## COG: ECs4685 COG1522 # Protein_GI_number: 15833939 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 279 94.0 2e-75 MENYQIDNLDRGILEALMANARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVS PKQLGYDVCCFIGIILKSAKDYPSALEKLNALDEVTEAYYTTGHYSIFIKVMCRSIDALQ QVLINKIQTIDEIQSTETLISLQNPIMRTIRP >gi|333596726|gb|GL892086.1| GENE 213 259516 - 259965 462 149 aa, chain + ## HITS:1 COG:STM3875 KEGG:ns NR:ns ## COG: STM3875 COG0716 # Protein_GI_number: 16767159 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Salmonella typhimurium LT2 # 1 147 1 147 147 237 78.0 6e-63 MADITLISGSTLGGAEYVAEHLAEKLEDAGFSTQTLHGPLLEDLPTDGVWLLITSTHGAG DLPDNLQPLYDELLEQQPDLSNVRFGAVGIGSREYDTFCGAIEKVDAAVTACGAKQLGET LKINILDHDIPEDPAEIWLAEWKNLLKND >gi|333596726|gb|GL892086.1| GENE 214 260340 - 262229 1896 629 aa, chain + ## HITS:1 COG:STM3874 KEGG:ns NR:ns ## COG: STM3874 COG0445 # Protein_GI_number: 16767158 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Salmonella typhimurium LT2 # 1 629 1 629 629 1198 95.0 0 MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMAKAIDHAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNAAQHPQQV PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARFSAEKEGWAPARSQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDDRWARFNEKLERIEQERQRL KTTWVNPQADTAAEVNAHLTAPLSREASGEDLLRRPEVTYENLVKLTAFAPGLEDAEAAE QVEIQVKYEGYIARQQDEIEKQQRNENTLLPEMLDYRQVTGLSNEVIAKLNDHKPVSIGQ ASRISGVTPAAISILLVWLKKQGMLRRSA >gi|333596726|gb|GL892086.1| GENE 215 262337 - 262960 374 207 aa, chain + ## HITS:1 COG:STM3873 KEGG:ns NR:ns ## COG: STM3873 COG0357 # Protein_GI_number: 16767157 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Salmonella typhimurium LT2 # 1 205 1 205 207 370 87.0 1e-103 MLNKLSRLLDQAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHILDSIVV APYLNGERFIDVGTGPGLPGVPLSIVRPESHFTLLDSLGKRVRFLRQVQHELKLENITPV QSRVEEFPAEPPFDGVISRAFASLNDMVSWCKHLPAEKGRFYALKGQLPGDEIEQLPDGF AVESIEKLQIPQLEGERHLVIIKPNSF >gi|333596726|gb|GL892086.1| GENE 216 263577 - 263957 254 126 aa, chain + ## HITS:1 COG:STM3872 KEGG:ns NR:ns ## COG: STM3872 COG3312 # Protein_GI_number: 16767156 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 157 84.0 3e-39 MSVSLLSRNVARKLLFIQFLAVIASGLLFSLKDPFWGISAACGGLAVVLPNVLFMIFAWR HQAHTPAKGRVAWSFALGEVCKVLLTFALLVMALAVLKVVFMPLIATWVLVLVVQVLAPA VINNKG >gi|333596726|gb|GL892086.1| GENE 217 263966 - 264781 1001 271 aa, chain + ## HITS:1 COG:STM3871 KEGG:ns NR:ns ## COG: STM3871 COG0356 # Protein_GI_number: 16767155 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 457 94.0 1e-129 MASENMTPQDYIGHHLNNLQLDLRTFSLVDPHNPPATFWTINIDSMFFSVVLGLLFLAMF RSVAKKATSGVPGKFQTFIEMIIGFVHGSVKDMYHGKSKLIAPLALTVFVWVFLMNLMDL LPIDFLPWIGEHVLGLPALRVVPSADVNITLSMALGVFILILFYSIKMKGVSGFVKELTL QPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVP WAIFHILIITLQAFIFMVLTIVYLSMASEEH >gi|333596726|gb|GL892086.1| GENE 218 264831 - 265070 345 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 97 83.0 5e-21 MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|333596726|gb|GL892086.1| GENE 219 265125 - 265589 501 154 aa, chain + ## HITS:1 COG:STM3869 KEGG:ns NR:ns ## COG: STM3869 COG0711 # Protein_GI_number: 16767153 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Salmonella typhimurium LT2 # 1 154 3 156 156 195 95.0 3e-50 MNATILGQAIAFILFVWFCMKYVWPPLMAAIEKRQKEIADGLASAERAKKDLDLAQANAT DQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVTQAQAEIEAERKRAREELRK QVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL >gi|333596726|gb|GL892086.1| GENE 220 265604 - 266137 634 177 aa, chain + ## HITS:1 COG:STM3868 KEGG:ns NR:ns ## COG: STM3868 COG0712 # Protein_GI_number: 16767152 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Salmonella typhimurium LT2 # 1 177 1 177 177 277 90.0 9e-75 MSEFVTVARPYAKAAFDFAVEHQNVDRWQNMLAFAAEVTKNEQMAELLSGALAPETLAAS FIAVCGEQLDANGQNLIKVMAENGRLRVLPDVLEQFEHLRALSEATAEVEVTSATELSDE QLAKITAAMEKRLSRKVKLNCKIDKSVMAGVIIRSGDMVIDGSVRGRLERLADVLQS >gi|333596726|gb|GL892086.1| GENE 221 266150 - 267691 1601 513 aa, chain + ## HITS:1 COG:ECs4676 KEGG:ns NR:ns ## COG: ECs4676 COG0056 # Protein_GI_number: 15833930 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 956 95.0 0 MQLNSTEISELIKQRIAQFSVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGP VEHDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAMAI DAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQYLAPY AGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLER ASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLF NSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDEATRKQ LSHGQKVTELLKQKQYAPMSVAQQGLVLFAAERGYLEDVELAKIGSFEAALLAYVDRDHA PLMQEINQTGGYNDEIEGKLKAILDSFKATQSW >gi|333596726|gb|GL892086.1| GENE 222 267743 - 268606 1165 287 aa, chain + ## HITS:1 COG:STM3866 KEGG:ns NR:ns ## COG: STM3866 COG0224 # Protein_GI_number: 16767150 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 536 96.0 1e-152 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLANGN LEYKHPYLEERDVKRVGYLVVSTDRGLCGGLNINLFKKLLADMKAWSDKGVQCDLALIGS KGVSFFNSVGGNIVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDRLYVVSNKFINTMS QVPTLTQMLPLPASEDDELKQKAWDYLYEPDPKPLLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV >gi|333596726|gb|GL892086.1| GENE 223 268638 - 270020 1584 460 aa, chain + ## HITS:1 COG:ECs4674 KEGG:ns NR:ns ## COG: ECs4674 COG0055 # Protein_GI_number: 15833928 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 880 98.0 0 MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSS DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEERWAIHRAAPSYEEL SSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVP ADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG VQSLLQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVS LKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL >gi|333596726|gb|GL892086.1| GENE 224 270041 - 270460 462 139 aa, chain + ## HITS:1 COG:STM3864 KEGG:ns NR:ns ## COG: STM3864 COG0355 # Protein_GI_number: 16767148 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 239 97.0 8e-64 MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIFPGHAPLLTAIKPGMIRIVKQFGHE EFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALESKRKAEEHISSSHGDVDYAQASA ELAKAIAKLRVIELTKKAM >gi|333596726|gb|GL892086.1| GENE 225 270599 - 271969 1674 456 aa, chain + ## HITS:1 COG:STM3862 KEGG:ns NR:ns ## COG: STM3862 COG1207 # Protein_GI_number: 16767146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 837 92.0 0 MLNSAMSVVILAAGKGTRMYSDLPKVLHTLAGKPMVQHVIDAATALGASQVHLVYGHGGD LLKKTLRDDNLNWVLQAEQLGTGHAMQQAAPFFSDDEDILMLYGDVPLISVETLTRLREA KPQGGIGLLTVVLDDPTGYGRITRENGNVTGIVEHKDATDEQRQIQEINTGILIANGADM KRWLSKLNNNNAQGEYYITDIIAMAYQEGREIAAVHPARISETDGVNNRLQLSRLERIYQ SEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDNNVILEGNVTLGNRVKIGTGCVIKN SVIGDDCEISPYSVVEDARLDAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSK AGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGNGVT IAAGTTVTRDVAENELVLSRVPQVSKQGWKRPVKKK >gi|333596726|gb|GL892086.1| GENE 226 272208 - 274037 2495 609 aa, chain + ## HITS:1 COG:glmS KEGG:ns NR:ns ## COG: glmS COG0449 # Protein_GI_number: 16131597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Escherichia coli K12 # 1 609 1 609 609 1141 94.0 0 MCGIVGAVAQRDIAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAE EHPLHGGTGIAHTRWATHGEPSEGNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFV SETDTEVIAHLVHWELAQGGTLRDAVLRAIPQLRGAYGTVIMDSRDPSTLLAARSGSPMV IGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEVTRRSVTVFDTKGEQVKRQEIESNLQ YDAGDKGAYRHYMQKEIYEQPNAIKNTLTGRISHGEVDLSELGANANELLGKVEHIQIVA CGTSYNSGMVSRYWFESLAGVPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAAL RLSKELGYLGSLAICNVPGSSLVRESDLALMTKAGTEIGVASTKAFTTQLTVLLMLVAKL ARLKGLDASVEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHSLFLGRGDQYPIA LEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRAR GGVLYVFADKDAGFASSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR NLAKSVTVE >gi|333596726|gb|GL892086.1| GENE 227 274284 - 275354 1236 356 aa, chain + ## HITS:1 COG:pstS KEGG:ns NR:ns ## COG: pstS COG0226 # Protein_GI_number: 16131596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli K12 # 11 356 1 346 346 595 93.0 1e-170 MIYEILAGDIMKVMRTTVATVVAATLSLSAFSAFAAASLTGAGATFPAPVYAKWADTYQK ETGNKVNYQGIGSSGGVKQITANTVDFGASDAPLSDEKLNQEGLFQFPTVIGGVVLAVNI PGLKSGELVLDGKTLGDIYLGKIKKWDDEAITKLNPGVKLPSQNIAVVRRADGSGTSFVF TSYLAKVNEEWKSKVGSGSTVNWPTGLGGKGNDGIAAFVQRLPGSIGYVEYAYAKQNNLA YTKLVSADGKPVSPTEENFANAAKGADWSKSFAQDLTNQKGDDAWPITSTTFILVHKEQK KPEQGAEVLKFFDWAYKNGGKQANDLDYASLPDSVVEQIRAAWKTNVKDSSGKALY >gi|333596726|gb|GL892086.1| GENE 228 275483 - 276442 1494 319 aa, chain + ## HITS:1 COG:STM3856 KEGG:ns NR:ns ## COG: STM3856 COG0573 # Protein_GI_number: 16767140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 319 1 319 319 528 97.0 1e-150 MAATKPAFNPPGKKGDMIFSVLVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGFAFLWTK EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLA AIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFVGALFSGPAFGIGILAAGVILAIM IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI VLAISKLMIMRLAKNEGAR >gi|333596726|gb|GL892086.1| GENE 229 276442 - 277332 1116 296 aa, chain + ## HITS:1 COG:STM3855 KEGG:ns NR:ns ## COG: STM3855 COG0581 # Protein_GI_number: 16767139 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 502 96.0 1e-142 MATLDMQNTAQLAESRRKMQSKRRIKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGM SLALFTEMTPPPNTAGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWIAEV IRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWST DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVIFAKKKHG >gi|333596726|gb|GL892086.1| GENE 230 277380 - 278153 330 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 11 252 2 239 245 131 36 1e-28 MSMVDTAPGKIQVRDLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMY SLYPEQRAEGEILLDGDNILTNTQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEK LSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP CSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSDTDALF TRPAKKQTEDYITGRYG >gi|333596726|gb|GL892086.1| GENE 231 278180 - 278905 1047 241 aa, chain + ## HITS:1 COG:STM3853 KEGG:ns NR:ns ## COG: STM3853 COG0704 # Protein_GI_number: 16767137 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 450 98.0 1e-126 MDNLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSELAKRVIEGDHN VNMMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTIAELERIGDVADKICRTALEKFSQQ HQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDSRTIPSVLTALFCARSIERIGDRCQNICEYIFYFVKGQDFRHVGGDELDKLLAGKDPK E >gi|333596726|gb|GL892086.1| GENE 232 278950 - 279615 699 221 aa, chain - ## HITS:1 COG:STM3852 KEGG:ns NR:ns ## COG: STM3852 COG0637 # Protein_GI_number: 16767136 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 409 85.0 1e-114 MSGIEAVFFDCDGTLVDSEVICSRAYVAMFREFGITLDLEEVFKRFKGVKLYEIIDIINE EHGVDLAKADLEPVYRAEVARLFDAELEVIAGANALLDAMTVPICVVSNGPVSKMQHSLG KLDMLHHFPEKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSSAGAQSGIDAGM EVFYFCADPHNKPIDHPKVTTFTDLAQLPALWKARGWDITR >gi|333596726|gb|GL892086.1| GENE 233 279778 - 281118 1800 446 aa, chain + ## HITS:1 COG:STM3851 KEGG:ns NR:ns ## COG: STM3851 COG2252 # Protein_GI_number: 16767135 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 446 42 487 487 721 94.0 0 MMSQQHTTQTSGQGLLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMD TSAVFVTTCLIAALGSILMGVFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFW GAVGLLLLTLFRVRYWMIANFPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGN LTSHSVLLGVLGFFIIAILASRNIHAAVLVSIIVTTLLGWMLGDVHYSGIVSAPPSVSTV IGHVDLAGSLNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDS ISSVAGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPPYAAA GALIYVGVLMTSSLARVKWEDLTEAVPTFITAVMMPFSFSITEGIALGFISYCIMKIGTG RFRELSPCVIIVALLFVLKIVFIDAH >gi|333596726|gb|GL892086.1| GENE 234 281210 - 281776 655 188 aa, chain - ## HITS:1 COG:STM3850 KEGG:ns NR:ns ## COG: STM3850 COG0431 # Protein_GI_number: 16767134 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Salmonella typhimurium LT2 # 1 188 7 194 194 338 90.0 3e-93 MSDTLKVVTLLGSLRKGSFNGMVARTLPQLAPAGMEISALPSIGDIPLYDADVQQEEGFP QSVEAIAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPEQPLSGKPVLIQTSSMGA IGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVVDQSTRDHLSGQLTAFG DYIKRVKA >gi|333596726|gb|GL892086.1| GENE 235 281813 - 282406 401 197 aa, chain - ## HITS:1 COG:STM3849 KEGG:ns NR:ns ## COG: STM3849 COG2091 # Protein_GI_number: 16767133 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Salmonella typhimurium LT2 # 1 195 52 247 251 257 62.0 1e-68 MLYGTSELPDILTQPEGRPVFADPALPHFSIAYTGNIVGVALTTEGDCGLDMELQRVTRS FHGANALDEYPLSSNEKLWIRNQNDPIEARAQLITLRQSIRKMSGAASDDASLLQLLPGS GRLRATKASLVEALSDAEDVLIWSVAVSPAIERLKIWEFDSTRGWRSLPDVPERANEPAA RLMRLTSLPAEKAYTHS >gi|333596726|gb|GL892086.1| GENE 236 282682 - 283653 922 323 aa, chain - ## HITS:1 COG:STM3848 KEGG:ns NR:ns ## COG: STM3848 COG0583 # Protein_GI_number: 16767132 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 20 314 20 314 319 462 76.0 1e-130 MKKPISSLDLNLLLCLQLLLQERSVTKAAKRMNVTPSAVSKSLAKLRDWFDDPLFVKTPL GLLPTPLTVSLEQDLADWMQIGNQILDKFHHSSPGGLKFVLAAETPLMLIRFNTLLEQVN ERYPQATVKLRQWDYDSLDAITRGEVDLGFTGRETHPRSRELLKLMPWFIDYEILFSDRP CVYLREDHPALQEVWDLETFLRYPHISIFWERSDTWALDEVLREMGRERNIAMSLPGFEQ SMFMAAQPDHNYIATAPHYCHHYNQLHQRNLVCLPIPIDEAQAEKLTVPFTLIWHKRNSH NPKILWLRETIKALYTAPGQVFA >gi|333596726|gb|GL892086.1| GENE 237 283622 - 284836 1214 404 aa, chain - ## HITS:1 COG:STM3847 KEGG:ns NR:ns ## COG: STM3847 COG0477 # Protein_GI_number: 16767131 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 14 403 1 394 395 490 72.0 1e-138 MPPILHACIYGGFMARFLFCSFALVLLYPSGIDMYLVGLPHIARDLGASEAQLHIAFSAY LAGMASSMVFAGKIADKAGRQPVAITGAVIFALASVLCSVAQESTMFLSGRFIQGIGAGG CYVVAFAILRDTLSAQRRAKVLSMLNGITCIIPVLAPVVGYLIMLKFPWQSLFWTMAAMG AIVFILSVTVLKETHPGSQQSHHAATLHPAEKLVNRFFLSRLAITTLSVAVILTYVNVSP VLLMETMGFDRGEYSTVMALTAMVSMAVSFSTPFALNLFRQRTLMLTSQGLFLAAGVILA TATSHAVMLVGITLICAGFSVGFGVAMSQALGPFSLRAGVASSVLGIAQVCGSSLWIWLA AVIGLNALNMLIGVLIGCSILCITLLMVIQPAAHYEEAHQQSRS >gi|333596726|gb|GL892086.1| GENE 238 284909 - 286273 1801 454 aa, chain - ## HITS:1 COG:thdF KEGG:ns NR:ns ## COG: thdF COG0486 # Protein_GI_number: 16131574 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 454 1 454 454 826 94.0 0 MSHNDTIVAQATPPGRGGVGILRISGLKAREVAEAVLGKLPKPRYADYLPFKDADGTPLD QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGLRIAKPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE IDFLSDGKIEAQLNQVMNDLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL FMVDGTTTDAVDPAEIWPDFIARLPAKLPITVVRNKADVTGETLGISDVNGHSLIRLSAR TGEGVEDLRNHLKQSMGFDTSMEGGFLARRRHLQALEEAARHLEQGKAQLIGAWAGELLA EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK >gi|333596726|gb|GL892086.1| GENE 239 286346 - 287989 1961 547 aa, chain - ## HITS:1 COG:STM3842 KEGG:ns NR:ns ## COG: STM3842 COG0706 # Protein_GI_number: 16767127 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Salmonella typhimurium LT2 # 1 547 1 548 548 1009 92.0 0 MDSQRNLLIIALLFVSFMIWQAWEQDKNPQPQQQTTQTTTTAAGSAADQGVPASGQGKQI TVKTDVLELTINTRGGDVEQALLLTYPKELKSTEPFQLLETTPEFIYQAQSGLTGRDGPD NPANGARPLYNVENDTFVMADGQNELVIPMTYTDAAGNTFTKTFTLKRGEYAVNVGYSVQ NAGAKPLEISTFGQLKQSINLPSHRDTGSSNFALHTFRGAAYSTPDTKYEKYKFDTIADN ENLNVSSKGGWVAMLQQYFATAWVPNNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQTG KLASTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKFIHSFLGNWGFSIIVI TFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRQSQEMMALYKAEKVNPLG GCFPLLIQMPIFLALYYMLMGSVELRHAPFALWIHDLSAQDPYYILPILMGVTMFFIQKM SPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLH SREKKKS >gi|333596726|gb|GL892086.1| GENE 240 288213 - 288539 75 108 aa, chain - ## HITS:1 COG:STM3840 KEGG:ns NR:ns ## COG: STM3840 COG0594 # Protein_GI_number: 16767125 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Salmonella typhimurium LT2 # 1 108 12 119 119 185 94.0 2e-47 MLTPTHFTFVFQQPLRAGTPQITILGRQNSLGHPRIGLTVAKKNVKRAHERNRIKRLTRE SFRLRQHELPSMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS >gi|333596726|gb|GL892086.1| GENE 241 288589 - 288729 228 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 [Escherichia coli O157:H7 EDL933] # 1 46 1 46 46 92 100 7e-17 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK >gi|333596726|gb|GL892086.1| GENE 242 289436 - 290761 1541 441 aa, chain + ## HITS:1 COG:STM3838 KEGG:ns NR:ns ## COG: STM3838 COG0593 # Protein_GI_number: 16767123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Salmonella typhimurium LT2 # 1 441 24 466 466 843 96.0 0 MWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLNDFCGSDAPQLRFEVGTKPV TQTVREVVNVAAPAQAAPAPAPRVAPARQGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKS NQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERF VQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIIL TSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIA KRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEY YKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQ LREESHDIKEDFSNLIRTLSS >gi|333596726|gb|GL892086.1| GENE 243 290766 - 291866 1196 366 aa, chain + ## HITS:1 COG:ECs4636 KEGG:ns NR:ns ## COG: ECs4636 COG0592 # Protein_GI_number: 15833890 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 706 95.0 0 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMIARVTLT QPHDAGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC SMPIGDSLPNHSVIVPRKGVIELMRMLDGGDTPLRVQIGSNNIRAHVGDFVFTSKLVDGR FPDYRRVLPKNPDKTLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQIKITANNPEQE EAEEILDVTYAGAEMEIGFNVSYVLDVLNALKCENVRILLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|333596726|gb|GL892086.1| GENE 244 291866 - 292939 881 357 aa, chain + ## HITS:1 COG:ECs4635 KEGG:ns NR:ns ## COG: ECs4635 COG1195 # Protein_GI_number: 15833889 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 682 95.0 0 MSLTRLLIRDFRNIESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV IRHEQESFVLHGRLQGAERETAIGLTKDKQGDSKVRIDGTDGHKVAELALLMPMQLITPE GFTLLNGGPKYRRAFLDWGCFHNEAGFFNAWSNLKRLLKQRNAALRQVTRYAQLRPWDME LIPLAEQISRWRAEYSAGIAEDMADTCKQFLPEFSLTFSFQRGWEKETDYAEVLERSFER DRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL IDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD >gi|333596726|gb|GL892086.1| GENE 245 292968 - 295379 3260 803 aa, chain + ## HITS:1 COG:STM3835 KEGG:ns NR:ns ## COG: STM3835 COG0187 # Protein_GI_number: 16767120 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Salmonella typhimurium LT2 # 1 803 1 804 804 1536 96.0 0 MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSQKLELVIQREGKIHRQIYQHGVPDAPLAVTGDTDKTGTMVRFWPSLETFTNVT EFEYDILAKRLRELSFLNSGVSIRLRDKRDNKEDHFHYEGGIKAFVEYLNKNKTPIHPNI FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY LLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG KQEQYIKDDDAMDQYQIAIALDGATLHANSSAPALAGEPLERLVSEFNATQKMIGRMERR YPKALLKELIYQPTLTEADLSNEQTVTRWVNTLVSELNEKEQHGSQWKFDVQQNAEQQFE PIVRVRTHGVDTDYPLEHEFVTGPEYRRICTLGEKLRGLIEDDAFIERGERRQPVASFEQ ALEWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTLM GDAVEPRRAFIEENALKAANIDI >gi|333596726|gb|GL892086.1| GENE 246 295468 - 296217 730 249 aa, chain + ## HITS:1 COG:STM3084 KEGG:ns NR:ns ## COG: STM3084 COG2186 # Protein_GI_number: 16766385 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 249 18 266 266 415 88.0 1e-116 MEQAITKRRYYDIGLQIEELLYSGVFKAGERLPSERELGERFNTSRTTIREAIIMLELKG VVEVRQGAGIYFIDSPEKLNQKSLLPYSDIGPFELLQARQVIESNITGFAATQIRLNELR ELKKIITQQEKMIDGNSDKFEELDRQFHNIIAEATQNRVLMKQSAELWRAVRTENPRWKR LNYKYLHKKELRMQWVDDHRSIFLALQKRNAEQARQAAWDHLEHSKNELVKIFQQDDSLD DFDDFFFAT >gi|333596726|gb|GL892086.1| GENE 247 296259 - 297347 1306 362 aa, chain - ## HITS:1 COG:SMb21107 KEGG:ns NR:ns ## COG: SMb21107 COG4948 # Protein_GI_number: 16264434 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Sinorhizobium meliloti # 5 357 4 356 370 235 35.0 8e-62 MDTAIKTVETRLFKVPLAEVLVDAKHGDHSHFELITTTITLENGETGTGYTYTGGKGGYA IKAMIDHDLAPVLAGKDAAAIDDIYDFMEWHIHYVGRGGIASFATSAIDIALWDLKGKRE QLPLWKMAGGKNKSCKAYCGGIDLAFPLEKLLNSIKGYLESGFNGVKIKVGQKNPQEDIE RIKAVRQLIGPDITFMIDANYSLTVDQAIALSKAVESCDITWFEEPTIPDDYDGYATIAE NTTIPLAMGENLHTIHEFGYALDRAKLGFIQPDASNCGGITGWLRAAQLSTRYGLPVCSH GMQELHVSLVSAFDTGWLEVHSFPIDRYTRRPLVVENYRAVAPDTCGTGVEFDWDKLTPF EV >gi|333596726|gb|GL892086.1| GENE 248 297753 - 299192 1073 479 aa, chain + ## HITS:1 COG:STM3083 KEGG:ns NR:ns ## COG: STM3083 COG0246 # Protein_GI_number: 16766384 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Salmonella typhimurium LT2 # 4 473 17 486 490 697 70.0 0 MESTAYSRQDLETAIVHIGIGAFHRGHQAVYTDLSNEAAGTRWGIFGINLFGSADVVEAL NAQHGLFTVVERSSHATLCRQVRSLTGALHTPLSGIQAAIEKLIEPQVKIVSLTVTEKGY CTDPQSRQLDLLNPLICHDLANPHAPQSAIGLIVEALRLRRLHNLPPFSVMSCDNIPENG ALTKGAVIAFAAQRDVGLADWIAQNVTFPGTMVDRIVPAMTEEAFALIEAETGKADPAGV VCEDFRQWVIEDNFVAGRPEWDRAGAMFVADVLPYEEMKLRMLNGSHSFLAYCGTLAGHE FIYQCMDDAVFNAAVRYLMVEEQANSLSPHLDLDVNQYANLLIARFSNPHIRHKTSQIAM DGSQKLPQRAIDPWRTLQMRGVKGTALTVLVAGWLHFVISAIGKGEAVADPLNAEFHACV TAQKEAWAKALSLLQIKSIFGSLASDNPQFLHDVRQAFEAIETHGVKAAIQHLLLKANV >gi|333596726|gb|GL892086.1| GENE 249 299189 - 300205 679 338 aa, chain + ## HITS:1 COG:STM3082 KEGG:ns NR:ns ## COG: STM3082 COG1063 # Protein_GI_number: 16766383 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 338 1 338 338 528 78.0 1e-150 MKTLICQAPGNIEYIERAMPELHETEALLKINAVGICGTDIHAYAGRQPFFSYPRVLGHE ICGVVEETGRACQRVQKGRRYSVIPCIPCGDCAACREGKTNCCENVSLYGVHQDGGFSEY LAVREENLVELPPTLSDNAGALVECFAIGAHAVRRADIAPQQNVLVVGAGPIGLAAAAIA KAKGGRVVVADIDAGRRQQIADKVGVHTVDPAQDNYVETVKACFDGQLACTLLDATGNKG SMTRAVDLIRHGGKIVFIGLYIGELAIDDPTFHKKETTLLASRNATREDFECVIALMANG TLNEHLMVNQEFDFYNIGDRYQQDVVENKNLVKGVIKF >gi|333596726|gb|GL892086.1| GENE 250 300215 - 301222 827 335 aa, chain + ## HITS:1 COG:STM3081 KEGG:ns NR:ns ## COG: STM3081 COG2055 # Protein_GI_number: 16766382 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 332 1 333 335 531 78.0 1e-151 MTTVFIKEDCLKTLVLNKLIPAGLDEKTAQDVADVLVHADMTGVHSHGVMRVEHYCTRLQ AGGLNPAAKMTINTVSPSVAVLDADDGMGHSALKVATDHAIALAKETGLGFVGIKNASHC GALSWFAERATQQNTIAIVMTQTDTCVAPHGGAERFLGTNPIAFGFPVAGEEPMIVDMAT SAIAFGKILHAKETGKPIGEGLALDKEGNVTTDPHKIENLLPFGGHKGSGIALASALTGI LMGANFGNHIVRMYGDYDKMRKLASLVIVIDPEKLGNPLFAATIKMMRDELRAVKPVPGV EKVLAPNDPQVRYKEKCQSEGIPVVESIYQYLSAL >gi|333596726|gb|GL892086.1| GENE 251 301369 - 302550 1216 393 aa, chain + ## HITS:1 COG:BS_yjmG KEGG:ns NR:ns ## COG: BS_yjmG COG0477 # Protein_GI_number: 16078301 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 1 384 18 401 422 353 50.0 4e-97 MINYIDRAALSILAPYITTDLNVNKAELGLIFSSFAIGYAVFCFVGGWLADKYGPRRIFA GAMGLWSLFAGLTCAAFNFTSLFIIRVIFGAAEGPMGSVTNKTIVKWFPARERARAVGVS FSGNPMGGAVSAPIVAASALAFGWRMTFVGMMLIGFVWVVVWLIATKGSEAPKEEADART VADTAGNDQPDEKLSYYLKQPIILFTALAFFAYSYILFFFMTWFPSYLLDARGLNMRDMS IANVLPWLLGFVGLISGGFISDYIYKLTNNLLFSRKVIIVVGLIIAAICITASALVLNLY GAIALMSVGMFAMYVTTSCYWAIVQDTVKGNNVGAVSGFIHFLANLAGVFAPMLTGFIVQ GTGQYYSAFYLVGALAIGSAVLLMLGGKKQTIA >gi|333596726|gb|GL892086.1| GENE 252 302708 - 303520 1018 270 aa, chain + ## HITS:1 COG:STM3831 KEGG:ns NR:ns ## COG: STM3831 COG0561 # Protein_GI_number: 16767116 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 270 1 270 281 514 95.0 1e-146 MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAAREKGVNVVLTTGRPYAGVHSYLKELHMN QPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRNTLYTANR DISYYTVHESYVATIPLVFCEAEKMDPATQFLKVMMIDEPAILDKAISRIPAEVKEKYTV LKSAPYFLEILDKRVNKGTGVKSLADALGIKPEEIMALGDQENDIAMIEYAGMGVAMDNA IPSVKEVANFVTKSNLEDGVAWAIEKFVLS >gi|333596726|gb|GL892086.1| GENE 253 303747 - 304436 744 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 414 94.0 1e-115 MTLNKTDRIVITLGTQIVGGKYVPGSPLPAEAELCEEFETSRNIIREVFRSLMAKRLIEM KRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLIGAMSEVRNLVEPAIARWAAERATSG DLAQIESALNDMIANNQNREAFNEADIRYHEAVLQSVHNPVLQQLSVAISSLQRAVFERT WMGDEANMPKTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT >gi|333596726|gb|GL892086.1| GENE 254 304433 - 305311 737 292 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 464 82.0 1e-131 MTSRYIAIDWGSTNLRAWLYQGEQCLESRQSEAGVTRLNGKSPAAVLAEVTQNWRDGTTP VVMAGMVGSNVGWKVAPYLSVPVHFTAIGEQLTSVGDNVWIIPGLCVSRDDNHNVMRGEE TQLLGARTLSPSAVYVMPGTHCKWVQADAEQIHDFRTVMTGELHHLLLKHSLVGAGLPEQ TPSPEAFAAGLERGIASPAILPQLFEVRASHVLGNLPREQVSEFLSGLLIGAEVATLSDT FAGQQTITLVAGSSLTSRYRQAFHAIGRDVAAVEGDTAFQAGIRSIAHAVAN >gi|333596726|gb|GL892086.1| GENE 255 305295 - 305912 681 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 241 62.0 6e-64 MQWQTELSLIAILRGITPGEALAHVGAVIDAGFDAVEIPLNSPDWEKSIPAVVKAFGDKA LIGAGTVLQPEQVDELAKMGCKLIVTPNINPEVIRRAVEYGMTVCPGCATATEAFTALDA GAQSLKIFPSSAFGPDYIKALKAVLPASVPVFAVGGVTPENLVQWMNAGCVGAGLGSDLY RAGQPVERTARQAAAFVKAYREAVQ >gi|333596726|gb|GL892086.1| GENE 256 305909 - 307057 1605 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 756 93.0 0 MKITKLTTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELGEYLIGQDPARI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV GGDRPAEVIDGIRQLRNIGFDTFKLNGCEEMGVIDNSRAVDRAVNTVAQIREAFGNEIEF GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAEQTHIPIAAGERMFSR FEFKRVLEAGGIAILQPDLSHAGGITECYKIAGMAEAYDVALAPHCPLGPIALAACLHVD FVSRNAVFQEQSMGIHYNKGAELLDFVKNKEDFCMEGGFFKPLMKPGLGVEIDEAKVIEL SKNAPDWRNPLWRHEDGSVAEW >gi|333596726|gb|GL892086.1| GENE 257 307238 - 308575 1920 445 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 445 1 445 445 782 93.0 0 MVSGFAMPKIWRQIAMDIPVTAAKTGRRRYLTLIMIFITVVICYVDRANLAVASAHIQEE FGITKAEMGYVFSAFAWLYTLCQIPGGWFLDRVGSRLTYFIAILGWSVATLFQGFATGLM SLIGLRAITGVFEAPAFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQE LLSWHWVFIVTGGIGIIWSLIWFKVYQPPRLTKSITKAELDYIRDGGGLVDGDAPVKKEA RQPLTRADWKLVFHRKLVGVYLGQFAVTSTLWFFLTWFPNYLTQEKGITALKAGFMTTVP FLAAFFGVLLSGWLADKLVKKGFSLGVARKTPIICGLLISTCIMGANYTNDPVWIMTLMA VAFFGNGFASITWSLVSSLAPMHLIGLTGGVFNFVGGLGGITVPLVIGYLAQDYGFGPAL VYISAVALIGALSYILLVGDVKRVG >gi|333596726|gb|GL892086.1| GENE 258 308627 - 309856 1031 409 aa, chain + ## HITS:1 COG:no KEGG:ECL_00013 NR:ns ## KEGG: ECL_00013 # Name: not_defined # Def: putative ATP/GTP-binding protein # Organism: E.cloacae # Pathway: not_defined # 1 409 1 409 409 757 90.0 0 MKQITFASRNHQLTNINTWTPDSQWLVYDVRPSGASFTGDTIERVNVSTGEVEVIYRATD GAHVGVVTVHPAQEKYVFIHGPAHPDADWQYDFHHRQGVIAQNGQVRNLDAMDITAPYTA GALRGGSHVHVFSPNGQWVSFTYNDHVLHERDPKLDLRNVGVATPFGPVNPQGKHPREYA GTFWSVLVSRTTPNPKPGSDEINRAYEEGWVGNNKLAFIGDTLSAKGEKVPELFIVDLPK DEQGWKRAGDAPLQGTPDTMPAPPAGVMQRRLTFTHQKAYPGLVNVPRHWVRSNPQGTQI AFLMRDDNGVVQLWLISPEGGEPRQLTHTERGIQSAFNWHPSGNSLGFVLAGRIASCDAQ TGDVTFLTSDHGNPPSADAVVFSPDGRFIAWMEEKDGFRQLWLTETAQN >gi|333596726|gb|GL892086.1| GENE 259 309853 - 310113 256 86 aa, chain - ## HITS:1 COG:ECs4628 KEGG:ns NR:ns ## COG: ECs4628 COG5645 # Protein_GI_number: 15833882 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 84 50 133 135 140 86.0 7e-34 MSHTGGKEGTYPGTRASAAMISDDETNWGTKSLAILDMPFTAVADTLLLPWDMFRTDSSV RSRVEKSEQDNLATNSVIPPAAMPPR >gi|333596726|gb|GL892086.1| GENE 260 310500 - 310910 637 136 aa, chain + ## HITS:1 COG:ECs4627 KEGG:ns NR:ns ## COG: ECs4627 COG0071 # Protein_GI_number: 15833881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 136 1 137 137 238 94.0 2e-63 MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGYPPYNVELVDENHYRIAIAVAGFAESEL EITAQDNLLVVKGSHTAEQKERTYLYQGIAERNFERKFQLAENIHVKGANLVNGLLFIEL ERVIPEEKKPRRIEIN >gi|333596726|gb|GL892086.1| GENE 261 311047 - 311475 687 142 aa, chain + ## HITS:1 COG:STM3808 KEGG:ns NR:ns ## COG: STM3808 COG0071 # Protein_GI_number: 16767093 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Salmonella typhimurium LT2 # 1 142 1 142 142 244 86.0 4e-65 MRNYDFSPLLRQWIGFDKLANALQSATEQQTFPPYNIEKSDDNHYRITLALAGFRQEDLD IQLEGTRLTVKGSPEKPDTETKWLHQGLVTQPFSLSFTLADHMEVSGATFTNGLLNIDLT RNVPEAIAPQRIAISERPALNS >gi|333596726|gb|GL892086.1| GENE 262 311667 - 313337 2132 556 aa, chain + ## HITS:1 COG:STM3807 KEGG:ns NR:ns ## COG: STM3807 COG2985 # Protein_GI_number: 16767092 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 4 556 1 553 553 909 90.0 0 MWIMSDIALTVSVLALVAVVGLWLGNIKIRGVGFGIGGVLFGGIFVGHFADQLGWVLSAD MLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAFGIVVMGGLVTAILHKLFAI PLPVVLGIFSGAVTNTPALGAGQQILRDLGIPADVVDQMGMSYAMAYPFGICGILLSMWL VRVLFRINVEREAKEHESTLTNGHALIKTINIRVENPNLNNMAIQDVPILNSATIICSRL KRDDTLMVPSPDTLIQHGDLLHLVGQPADLNNARLVIGQEVDTSLSTRGTDMRVERVVVT NEKVLGKKIRDLQVKERYDVVISRLNRAGVELVASQDASLQFGDILNLVGRPSSIDAVAN MVGNAQQKLQQVQMLPVFIGVGLGVMLGSIPLYVPGFPVALKLGLAGGPLIMALILGRIG SIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVDTLVNGEGMSWIGYGIFITAIP LITVGILARMFAKMNYLTLCGMLAGSMTDPPALAFANNLHTTSGAAALSYATVYPLVMFL RIITPQLLAVLFWGMG >gi|333596726|gb|GL892086.1| GENE 263 313334 - 314818 1372 494 aa, chain - ## HITS:1 COG:STM0886 KEGG:ns NR:ns ## COG: STM0886 COG3119 # Protein_GI_number: 16764247 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Salmonella typhimurium LT2 # 1 492 1 492 495 880 83.0 0 MKAIILLFDSLNKHYLPPYGDVITQAPNFQRLAAHAVTFNNSYVGSMPCMPARRELHTGR YNFLHREWGPLEPFDDSMPELLKKAGVYTHLISDHLHYWEDGGGNYHNRYNSWEIVRGQE GDSWKGSVADPVIPEVLRVPQKQTGGGVSGLWRQDWVNRDYIREEADFPQTRVFAAGCEF IEKNHSQDNWLLQVETFDPHEPFYTTEEYLSLYEDPWDGPHYDWPRGKVEESAEAVEHIR CRYRALVSMCDRNLGRILDLMDSHDLWRDTMLIVGTDHGFLLGEHGWWAKNQMPYYNEVA NNPLFIWDPRHARRAEQRDSLVQMIDWAPTLLEFFRQPIPADVQGQPLTPVLQDDTPVRD AALFGVFSGHVNVTDGRYVYMRAALPGRENDIANYTLMPIKMNTRFDVAELHALTLAPPF RFTKGVSTLRIPAKEKYKGINRTGHLLFDLYTDPQQLNPIKDDAIEARMIALLVRLLHES DAPAEQFVRLGLSG >gi|333596726|gb|GL892086.1| GENE 264 314828 - 315151 342 107 aa, chain - ## HITS:1 COG:STM0885 KEGG:ns NR:ns ## COG: STM0885 COG3414 # Protein_GI_number: 16764246 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 104 1 104 106 192 86.0 1e-49 MKERINILFVCGYGVGSSVMLQTVVKKALAKYNIAFEMEHTAAGEVGGFTDWADIYAISK KLIDVVSLDPRHGQYLIPIENIMDGETIGKQIYAVVEEHFPHLIPSR >gi|333596726|gb|GL892086.1| GENE 265 315180 - 316505 1240 441 aa, chain - ## HITS:1 COG:STM0884 KEGG:ns NR:ns ## COG: STM0884 COG3037 # Protein_GI_number: 16764245 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 440 7 446 447 723 89.0 0 MFSEFIAIIQSFLTEPAILIGLLVGLGYALDKKSPIKIITGMVSAMVGLMMVLFGGFQFS ATFKPVADAVSQSYGIHGYLMDSYAMKAATQIALGDNFGFVGYVFVLAFFTNLLLVLLGR YTRVKGIFLTGNTGVSHSQAVLWLIVFWLGLGWVPSIIIAGILTGLFWAFATTLIAKPIA KITNNAGFTIAHNQMLGIWFFSKFAHLFGDAEKQDAENMKLPGWLAIFNHNVTSIAIVMT LFVGGFLLTTGIDNVQAMAKGKPWYIYIINLGLQFSMYMVILLQGVRMMVGEINASFKGW QDRLIPDAIPAVDVAALLPFSPNAATLGFIFCTFGTIFSMGILLITKSPIMVLPGFVPLF FSGGPIGVLANRLGGYRSVIICTFLLGMIQTFGTIWAIPLTGLAAEGVGWTGIFDWATLW PAICEILKFIAATFHLGPYAG >gi|333596726|gb|GL892086.1| GENE 266 316939 - 318354 1177 471 aa, chain + ## HITS:1 COG:no KEGG:Despr_1642 NR:ns ## KEGG: Despr_1642 # Name: not_defined # Def: arylsulfotransferase # Organism: D.propionicus # Pathway: not_defined # 7 336 40 360 627 84 28.0 1e-14 MKATSTVIVNPYDKNKLSALIKIDYYQPVKFNYTVHGKSSNVDFYYASDRYAVNPEVTVV GLYANYANTVTLTLYTEQGETQTSVFTISTEGQDYGDVALTLAINIDDRDMADNTLGQGW FVTSEWNGYDINGDLRITGLFPWMYGNLKIIDNSLWSALASETYDPDKHAFAPTLYRFNL AGKVTQTLAAPAGYGFHHDLTTDGKGNLWMLGSLLDGWSDQQKLECMLYRYDLASGTLLW QRDYTAEFMGATVLDNTDTNDVHFNSLEYIAQTNQLMINSRSSCTIIGLNIDSGDPEWII DNPAFPTLNSALNLSVVDADNFTYPDGEHAVFITKNRQYDAWRGDNKIVISLFNNNSCAD EKGNELVRIIESPPVAYTAAALDSLPTVLAVDLSARTVQRLDQFHITGQRSELTSSVFDV GDDNFNVYFGAEQSFFVFDTDNNIGVSIYNIDSGLGYRGRILSFDELRTLI >gi|333596726|gb|GL892086.1| GENE 267 318370 - 319113 783 247 aa, chain - ## HITS:1 COG:yidP KEGG:ns NR:ns ## COG: yidP COG2188 # Protein_GI_number: 16131552 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 236 1 236 238 373 77.0 1e-103 MIYKSIADRLRLRLNSSDYNIGSPLPGEKALAQEFGVARMTIRKALDLLVSWGLVERRHG SGTFVSRKDVHHETTNLTGLVEVLRQQGKEVQSKVLQFEVMPAPPAIASQLRIQVDERIY FSRRVRYVDGKPLMLEDSFMPVKLFRNLSLAHLEGSKFDYIEKECGITISGNYESLTPVL ADKQLAGYMNVPEQTPLLRITSLSYSDSGEFLNYSVMFRNTSDYQVDYHLRRIHPEDLLT HPPEQQR >gi|333596726|gb|GL892086.1| GENE 268 319336 - 320958 1857 540 aa, chain + ## HITS:1 COG:ECs4623_1 KEGG:ns NR:ns ## COG: ECs4623_1 COG1263 # Protein_GI_number: 15833877 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 1 440 88 527 527 733 84.0 0 MLSQIQRFGGAMFTPVLLFPFAGIVVGIAIMLRNPLFVGEALTAPDNLFAQIVHIIEEGG WAVFRNMPLIFAVGLPIGLAKQAQGRACLAVLISFLTWNYFINAMGMTWGHFFGVDFSAE PTAGSGLAMIAGIKTLDTSIIGAIIISGLVTALHNRFFDKPLPVFLGIFQGTSFVVILAF FVMIPCAWLTLLGWPKVQMGIESLQAFLRTAGALGVWVYTFLERILIPTGLHHFVYGPFI FGPAAVEGGIQVYWAQHLQEFSQSTVPLKTLFPEGGFALHGNSKVFGSIGIAFAIWYTAS PENRVKVAGLLVPATLTAVLVGITEPLEFTFLFISPLLFAIHAVLAATMATVMYTFGVVG NMGGGLLDQFLPQNWIPMFHNHASTVFTQIGIGLCFTALYFVVFRTLIERLSLKTPGREE SEIKLYNKADYKAARGQTTAPAAGSQQVGQAAGFLQALGGAANIESINNCATRLRIALVD MTKTQSDDVFKALGAHGVVRRGNGIQVIVGLHVPQVRDQLESLMKTPLTNEQTTLTEAIS >gi|333596726|gb|GL892086.1| GENE 269 320955 - 322277 1707 440 aa, chain + ## HITS:1 COG:Z5177 KEGG:ns NR:ns ## COG: Z5177 COG1486 # Protein_GI_number: 15804281 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 439 1 439 440 834 88.0 0 MKKFSVVIAGGGSTFTPGIVLMLLANRDRFPLRALKFYDNDGARQEIIAEACKIILKEQA PEIEFSYTTDPKAAFTDVDFVMAHIRVGKYPMREKDEKIPLRHGVLGQETCGPGGISYGM RSIGGVLELVDYMEQYSPNAWMLNYSNPAAIVAEATRRLRPNAKILNICDMPIGIEGRMA QIVGLKDRKEMRVRYYGLNHFGWWTSIEDLNGNDLMPKLREYVAKNGYVPPSEDAHTEAS WNDTFAKAKDVQALDPDTMPNTYLKYYLFPDYVVAHSNPERTRANEVMDHREKHVFSSCR AIIEAGHSSAGELEIDEHASYIVDLATAIAFNTQERMLLIVPNNGAIHNFDADAMVEIPC LVGHNGPEPLTVGDIPHFQKGLMSQQVAVEKLVVDAWEQRSYQKLWQAITLSKTVPSASV AKAILDDLIEANKDYWPELH >gi|333596726|gb|GL892086.1| GENE 270 322370 - 322717 512 115 aa, chain + ## HITS:1 COG:STM3805 KEGG:ns NR:ns ## COG: STM3805 COG2149 # Protein_GI_number: 16767091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 166 86.0 1e-41 MNISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPLIREVLALLLC LIAGVLAIYGYLRWLKNEKAMRLKQDLPYTRGLLIISTILLMVAGVVMLLVLYAG >gi|333596726|gb|GL892086.1| GENE 271 322707 - 323069 260 120 aa, chain + ## HITS:1 COG:no KEGG:CKO_00023 NR:ns ## KEGG: CKO_00023 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 120 1 120 120 165 72.0 7e-40 MPDSRKARREADPGLQPERTSLAWLRTLLGYGALMVLAVRHNWQQAGPLFWAALGILAAV ALLLWYYTRSRTRMDVSHYDFSASRTLRSKFLISLAVFSLALLFAAGHVHHLISLIRDIA >gi|333596726|gb|GL892086.1| GENE 272 323066 - 324169 934 367 aa, chain + ## HITS:1 COG:STM0036 KEGG:ns NR:ns ## COG: STM0036 COG0641 # Protein_GI_number: 16763426 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Salmonella typhimurium LT2 # 4 359 7 391 396 408 51.0 1e-114 MTGCQVMAKPAGSRCNLDCRYCFYIAKPQQPMMDDVTLDAFIQQHIDAQPGPEVQFAWQG GEPTLCGLDFFRRVVALQTRHARGKRIVNAFQTNGIVLNDAWCTFLSEHDWLVGISLDGP AELHDAYRVSRSGGPTHHKVIAAIDKLRAHQVSFNLLTVINRQNSGQPERLYRYLRDLGT PYVQFIPLVEHGNPESVSDVQWSHFLKTVFDIWVREDIGRVFVQLFDSTLGVWRGYPSQM CALAGRCGHAFALEANGDLYQCDHYVFPQYRLGNIHQTPLATLNDSDAARAFGEDKQRTL AAECQRCQVIGLCNGDCPRHRLNGKSVLCAGYRDFFFHSAPYMRAMRDLIRHQRSPAELM KQLRQSG >gi|333596726|gb|GL892086.1| GENE 273 324173 - 325462 1632 429 aa, chain - ## HITS:1 COG:ECs3245 KEGG:ns NR:ns ## COG: ECs3245 COG3048 # Protein_GI_number: 15832499 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli O157:H7 # 1 427 1 441 442 714 82.0 0 MKTTDLTSLIDRFPLLADLIALKETTWRNPRTTTLAEGLPYVGLTRADVDDAHARLQRFA PYLAKAFPETAASNGLIESELVAIPAMKTRLEQESGATIHGTLLLKKDSHLPISGSIKAR GGIYEVLAHAEKLALEAGLLRLEDDYSILLEPRFKTFFSQYSIAVGSTGNLGLSIGIMSA RIGFKVTVHMSADAREWKKAKLRSHGVIVVEYEQDYGVAVEQGRKAAESDPNCFFIDDEN SRTLFLGYAVAGERLKAQFAEQGRVVDADHPLHVYLPCGVGGGPGGVAFGLKLAFGDNVH CFFAEPTHSPCMLLGVYTGLHDEIAVQDLGIDNVTAADGLAVGRASGFVGRAMERLLDGF YTLSDQSMYDLLGWLAQEEGIRLEPSALAGMAGPLRVQADANTTHLVWATGGGMVPEDEM AKYLAKGNA >gi|333596726|gb|GL892086.1| GENE 274 325584 - 326633 899 349 aa, chain + ## HITS:1 COG:no KEGG:ECL_00026 NR:ns ## KEGG: ECL_00026 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 2 349 10 357 362 594 87.0 1e-168 MLAIASGWACAAEPPLTAARYAQMLGVGMDVDWARTERGIREFDPLVVRDFQAKGIHHVR IRVAGEPTEARLIHLRKLVEACEQYGVIPIIAYQADEYKNDPKADTEDAVINWWIAVAHY FGQRSPLLGFDLIYEPADKLNHNIASLNRVYEKAIKDIHAIDASRMIFIAPRLRAAPEDL SSLKLPAHSQNYLLAEWHIFPWGPLKTNGKYPWTSGTVAEKAAIRNRINAALHWQQKTGH VSWVGGWGVGESKSLTPTASQMAFATFMACELQHAKIPYALNADFQFYDGEEGAWRPAPE PLLQAMIAPVCEKPGEKPGHHAVKPAVRDAGRATPAAASTAKSATPSAS >gi|333596726|gb|GL892086.1| GENE 275 326551 - 327702 1533 383 aa, chain - ## HITS:1 COG:STM3798 KEGG:ns NR:ns ## COG: STM3798 COG0477 # Protein_GI_number: 16767084 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 9 383 20 394 394 550 90.0 1e-156 MLVLLVAVGQMAQTIYIPAIADMAKDLSVREGAVQSVMAAYLLTYGVSQLVYGPLSDRVG RRPVILVGMSIFMVATVIAITTHSLTVLIAASALQGVGTGVGGVMARTLPRDMYQGTQLR HANSLLNMGILVSPLLAPLIGGLLDTVWSWRACYAFLLVLCIIVTFSMARWMPETRPQDA PRTKLIASYKTLFGNGAFTCYLLMLIGGLAGIAVFEACSGVLLGAGLGLSSMVVSILFIL PIPAAFFGAWFAGRPNKRFSTLMWQSVISCLLAGLMMWIPGLFDVMSVWTLLIPAALFFF GAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGALAWLSAMMPQTGQASLGLLMTL MGLLILLCWLPLASRVPHHEQPV >gi|333596726|gb|GL892086.1| GENE 276 327911 - 328744 934 277 aa, chain - ## HITS:1 COG:STM3796A KEGG:ns NR:ns ## COG: STM3796A COG0697 # Protein_GI_number: 16767083 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 277 10 286 286 373 82.0 1e-103 MTITVFCILLFAALLHASWNAIVKAGTDKLYSAIGVSGSAAVIALILLPFSPQPSAASWP FLFVSCALQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVALISVMALGDHLSWLAWSGI GVICLSILAMAMNGRMQSRKGVWLALLNACFIAGYTLVDGTGVRLSDTALGYTLWTFFMN GFCLLSWAMVARRREASSYLRLHWKKGLLGGVGTMGSYGLALWAMTQAPLAVVAALRETS ILFGALIAFVLLKEKVVGLRIAAALGIAAGAILLRLA >gi|333596726|gb|GL892086.1| GENE 277 328807 - 329253 472 148 aa, chain - ## HITS:1 COG:mll2713 KEGG:ns NR:ns ## COG: mll2713 COG0454 # Protein_GI_number: 13472423 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Mesorhizobium loti # 5 144 49 188 194 114 42.0 7e-26 MSRLLIEPVTPDEPGYIALKAESIALNFNMLHRLEENWQRGENRFNAPGEKLLGAFLNGR LVGVCGLNRDPFSQQPRAGRIRHLYVSEKCRGQGIGKQLLTVVMADASIWFDFLNTYAPE TAYGFYHQAGFRLVSDEPRVTHRLFCAV >gi|333596726|gb|GL892086.1| GENE 278 329318 - 329407 67 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVVDMVILILKLIVAVLQLLDAVLKYVK >gi|333596726|gb|GL892086.1| GENE 279 329859 - 330275 277 138 aa, chain + ## HITS:1 COG:ygjM KEGG:ns NR:ns ## COG: ygjM COG5499 # Protein_GI_number: 16130977 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Escherichia coli K12 # 3 138 4 138 138 146 55.0 1e-35 MIVADAMKATHALVAAVPLLGEQPSEKDYKDALELVEYLLMNEPNSPLLDIVCARISRYE ANRPEIVALRKEMESVPVGIAVLRTLMDQYKLTISDFQDEIGSKSMVSRVLNGQRQLTLN HIKKLAARFGVSPALFIE >gi|333596726|gb|GL892086.1| GENE 280 330628 - 332316 2087 562 aa, chain + ## HITS:1 COG:ECs4612 KEGG:ns NR:ns ## COG: ECs4612 COG0028 # Protein_GI_number: 15833866 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 562 1 562 562 973 87.0 0 MASSGTTSTKTRFTGAQLIVHLLERQGITTVAGIPGGTVLPLYDALSQSTQIRHVLARHE QGAGFIAQGMARTQGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPSSMIGTD AFQEVDTYGISIPITKHNYLVRDISELPQVISDAFRIAQSGRPGPVWIDIPKDVQTAEIE IDVLPEPGERAPAPEFSAESVRDAAAMINAARRPVLYLGGGAINAADEIRQFAEKANLPT TMTLMALGMLPKAHPLSLGMLGMHGARSTNYILQEADLLIVMGARFDDRAIGKTEQFCPN AKIIHVDIDRAELGKIKQPHVAIQGDVAEVLAQLIPQTEATERADWRQLVADLQREFPGA IPTEGDPLSHYGLINAVAACVDDSAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMG FGLPAAVGAALANPDRKVICFSGDGSLMMNIQEMATAAENQLDVKIILMNNEALGLVHQQ QSLFYKQGVFAATYPGMINFMQIAAGFGLHTCDLNAEEDAHAALQEAISRPGPALIHVRI DPEQKVYPMVPPGAANTEMVGE >gi|333596726|gb|GL892086.1| GENE 281 332320 - 332607 387 95 aa, chain + ## HITS:1 COG:STM3795 KEGG:ns NR:ns ## COG: STM3795 COG0440 # Protein_GI_number: 16767079 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Salmonella typhimurium LT2 # 1 95 1 96 96 174 91.0 3e-44 MQKQHENVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQGSEHSRIWLLVNDDQR LEQMMAQIDKLEDVTKVARNQSDPTMFNKIAVFFE >gi|333596726|gb|GL892086.1| GENE 282 332690 - 333283 746 197 aa, chain + ## HITS:1 COG:ECs4606 KEGG:ns NR:ns ## COG: ECs4606 COG2197 # Protein_GI_number: 15833860 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 360 93.0 1e-99 MTTIALIDDHLIVRSGFAQLLNLEPDFQVVAEFGSGREALAGLPGRGVQVCICDISMPDL SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVRTVSTGGC YLTPDIAIKLAAGRQDPLTRRERQVAEKLAQGMSVKEIAVELGLSPKTVHVHRANLMEKL NVSNDVELARRMFDSWQ >gi|333596726|gb|GL892086.1| GENE 283 333280 - 334785 1882 501 aa, chain + ## HITS:1 COG:STM3789 KEGG:ns NR:ns ## COG: STM3789 COG3851 # Protein_GI_number: 16767073 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Salmonella typhimurium LT2 # 1 497 1 498 500 744 89.0 0 MNSLFSRLIAVVASFFIFSAAWFCLWSISLHLVERPELAVLLFPFGLRLGLMLQCPRGYW PVLFGAEWLMLIWLAQEVALANLPLLMTGSLLTLLPVALISRYRHQRDWRTLLRQGAALI AAALLQSLPWVGEKEVLNALLLTLTGGLTLAPTCLVFWHYLTSTVWQPLGPALVSQPVNW RARHLIWYLLLFVVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIA LIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQAELARNRRLAERLLETE ESVRQEVARELHDDIGQTITAIRTQAGIVQRLAAENAGVKQGGAHIEQLSLGVYDSVRRL LGRLRPRQLDDLSLEQAVRSLMREMELESRGIVSHLDWRINEPALSEGQRVTLFRVCQEG LNNIVKHASASAVTIQGWQQDERLMLVIEDDGCGLPPGSGQQGFGLAGMRERVKALGGTL TLSCTNGTRVSVSLPLRTMHV >gi|333596726|gb|GL892086.1| GENE 284 334778 - 336088 1814 436 aa, chain + ## HITS:1 COG:ECs4604 KEGG:ns NR:ns ## COG: ECs4604 COG2271 # Protein_GI_number: 15833858 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 2 436 6 440 440 729 88.0 0 MFKTPASAAPLSNKAEIDARYRYWRRHILITIWLGYALFYFTRKSFNAAAPEILASGVMA RTDIGLLATLFYITYGLSKFFSGIVSDRSNARYFMGVGLIATGVVNILFGFSTSLWAFAL LWALNAFFQGWGAPVCARLLTAWYSRNERGGWWAIWNTAHNVGGALIPMVVGAAALHYGW RAGMMIAGGLAIVAGLFLCWRLRDRPQTVGLPPVGDWRHDEMEIAQQQEGAGLTRQEILT RYVLKNPYIWLLSLCYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVTMFELGGFIGA LVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQM LIGMAAAECSHKEAAGAATGFVGLFAYLGASLSGWPLARVIDVWHWSGFFAVIAIAAGIS ALLLLPFLHAQAPREA >gi|333596726|gb|GL892086.1| GENE 285 336221 - 337612 2249 463 aa, chain + ## HITS:1 COG:ECs4603 KEGG:ns NR:ns ## COG: ECs4603 COG2271 # Protein_GI_number: 15833857 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 810 94.0 0 MLAFLNQVRKPTLDLPLDVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY GLSMTQLGMIGLGFSITYGVGKTVVSYYADGKNTKQFLPFMLILSAICMLGFSASMGAGS VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGSYLGMWNISHNLGGAGAAGVAL FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET EENEMSKWQIFVEYVLKNKVIWLLCFSNIFLYVVRIGIDQWSTVYAFQELKLSKEVAIQG FTLFEVGALVGTLLWGWLSDLANGRRALVACVALALIIATLGVYQHASNQYVYLASLFAL GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPIFGLT GWAGTFAALDAAAIGCIVLMAMVAVLEERKIRRENRAQKLKVA >gi|333596726|gb|GL892086.1| GENE 286 337774 - 338778 1377 334 aa, chain + ## HITS:1 COG:PA3053 KEGG:ns NR:ns ## COG: PA3053 COG0596 # Protein_GI_number: 15598249 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 18 334 18 334 335 475 69.0 1e-134 MLTRRLSCLALLMALASPAMAADAPTYGEKLEGFDYGWPVKHFTFTSQNQPLDMAYLDVK PEKPNGRTVVLMHGKNFCAGTWDGTIRALSASGYRVIAPDQIGFCKSTKPEHYQYTFQQL ADNTHALLKTLGVDRVTVIGHSTGGMLATRYALMWPQQVEQLVMVNPIGLEDWKARGVPH ITVDQWYQRELKVSADGIRQYEKNTYYAGEWKPEYERWVTMLAGLNNGPGKARVAWNSAL LYDMIYTQPVVYEFSELKMPVLLMIGTKDNTAIGKDLAPPEIRKTLGNYAMLGKETAKRI PHATLVEFNDMGHAPQMQDPARFHEALLKGLQAR >gi|333596726|gb|GL892086.1| GENE 287 338930 - 339382 555 150 aa, chain + ## HITS:1 COG:no KEGG:ECL_00042 NR:ns ## KEGG: ECL_00042 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 150 1 150 150 295 98.0 4e-79 MVWIMLATLAVVFVVGFRVLTSDSRRAIKRLSERLGITPMPVESMIDQFGKTPGNEFIRY LERPDEAHLQNAAQVLLIWQVCIVDGSEENLHTWYRMLRKARLAAPITDAQIRLALGFMR EMEPDPQELNAFQLRYNQLFLPEEGVFYLH >gi|333596726|gb|GL892086.1| GENE 288 339379 - 340299 439 306 aa, chain - ## HITS:1 COG:PA5029 KEGG:ns NR:ns ## COG: PA5029 COG0583 # Protein_GI_number: 15600222 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 15 274 3 267 301 105 27.0 1e-22 MASAEHLISNNLPSIKQLQCFLAVAHELNFRKAAERLRMTQPPLTRQIKCLEAVLKRQLF SRSTHDVSLTEAGRALVVQAEKILKDISSLKEDPHSSETSLRIGLTRTLNFEYIEPVNTQ LQKMNAGDDVETPDLTSAQLLQSLSKNMLDLVLTGEKGTGHEDIVQYRWVCQEPLLIAMP SLHPASLKEKVSLEDISDLPLFWFSRSANPSFYDKCESYFDTLKTPLKRIKEPDDSLVML SRIARGKGFALLPQSKCTFNQEGLCYRELTDDEAKRLNIDIYAATRLNENREEILNAQNF LCGKKA >gi|333596726|gb|GL892086.1| GENE 289 340487 - 340867 289 126 aa, chain + ## HITS:1 COG:no KEGG:ETA_24120 NR:ns ## KEGG: ETA_24120 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 1 125 1 125 203 193 77.0 2e-48 MSSKYVLVSRFPLKNTFSEKEFTSLKSDENVRYYTCEENGVNELLELRAFNDIKEIAWVE SEMESMFHRFSEVLSADIRRELLKFVESPIDNKNSLPQSNYIQLRHVEVPAHNYQQYRQW RDETIT >gi|333596726|gb|GL892086.1| GENE 290 340921 - 341145 161 74 aa, chain + ## HITS:1 COG:no KEGG:ETA_24090 NR:ns ## KEGG: ETA_24090 # Name: not_defined # Def: 4-oxalocrotonate tautomerase family protein # Organism: E.tasmaniensis # Pathway: Benzoate degradation [PATH:eta00362]; Dioxin degradation [PATH:eta00621]; Metabolic pathways [PATH:eta01100]; Microbial metabolism in diverse environments [PATH:eta01120] # 1 74 1 74 74 122 79.0 4e-27 MPFVHVMTWPAKDENQIIRLQEDITFAVHKNTGAPLDKISVVVSEIAPSRWADAGVSGTD KDFPVKSRRKNYEE >gi|333596726|gb|GL892086.1| GENE 291 341206 - 341409 118 67 aa, chain + ## HITS:1 COG:no KEGG:ETA_24080 NR:ns ## KEGG: ETA_24080 # Name: not_defined # Def: HAD-superfamily hydrolase, subfamily IB # Organism: E.tasmaniensis # Pathway: not_defined # 1 42 20 61 216 66 61.0 4e-10 MFDFYDFWCRENNQNDRLQRYMSRFRTDVKDGVPRETLNRDYVWESIPRLPDMQLKKTGT LFKSLLR >gi|333596726|gb|GL892086.1| GENE 292 341415 - 342635 890 406 aa, chain + ## HITS:1 COG:mll6183 KEGG:ns NR:ns ## COG: mll6183 COG2814 # Protein_GI_number: 13475166 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Mesorhizobium loti # 14 362 93 440 475 159 34.0 1e-38 MTSELSLQNMTLRSWLALFILAISTFTIVTTELAPVGLLTPIAEGLQSSESAVGMTVSLY AWVGALSALFASVFLGNVAKKRLLLVLTVVLLVSNVMAATVHTYSMLLSARVLGALAHGA FWAMIGATAVAMVPARYIGAATSIVFGGVSAASVFGVPVSNYIGIHFGWRQAFWLMAALS VIAFVGISVLVPRITSRSALGLDALKGVLKSSTLWKIYSATLLAVTAHFAAFTYIEPWLH TQSLLSTAIIPAVLFVYGIAGLAGNFLTGVLIDKYLKLTVSLSVLLICAVLLFLGLSGSS LSAALIFTSMVVWGVAVSGIFVGFQTWVLRMAEDKAFPASAIYVSFFNTAIGIGASVGAW MVSAFSMPLLYIVAGSAIGLSVLLVAVIPSTLTAKQSRMEKSYESN >gi|333596726|gb|GL892086.1| GENE 293 342681 - 342989 267 102 aa, chain + ## HITS:1 COG:STM3019 KEGG:ns NR:ns ## COG: STM3019 COG0183 # Protein_GI_number: 16766321 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 83 1 83 392 89 55.0 2e-18 MSEIVIIAARRTATGAFQGALAEHSASDLGSRVFQALLKESDVEASDISQIIMGQVLTAG CGQNPARQSALNAGLPVDTQCLTKLKPVFRKEGTVTAGKASR >gi|333596726|gb|GL892086.1| GENE 294 343066 - 344064 772 332 aa, chain - ## HITS:1 COG:DR2261 KEGG:ns NR:ns ## COG: DR2261 COG0667 # Protein_GI_number: 15807252 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Deinococcus radiodurans # 1 331 4 326 327 304 48.0 1e-82 MKTRTLSQNLTVSTVGYGAMGLSEFYGQTDDKDSLQVLHSLIDLNVTFIDTANLYGRGHN ERLIGHFLAGLDKNTRDQFKIATKCGIDRSPDDSYARTINNTPDYIIRCCNESLKRLGVE RIDLFYLHRVSNATPIEESMDCLRTLVKEGKINHIGLCEVSASTLQRAHAVHPVTALQTE YSLWTRDIEESILPVVKALGIGLVPYSPLGRGFLTGKYLNNNDFAEGDFRKNNERFVQSS LDHNRQLLDIITPLATKYGCTAGQIALAWLLAQYDRLVPIPGTKHVSYLAENARAADIVL EKSDIESLNNLHRRVAIKGERYSAEGMKGVNA >gi|333596726|gb|GL892086.1| GENE 295 344272 - 345462 1509 396 aa, chain + ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 14 396 67 449 451 557 84.0 1e-158 MTEHIQPTTRPQTNEVSRPNWSAVFAVAFCVACLITVEFLPVSLLTPMAQDLGISEGVAG QSVTVTAFVAMFASLFITQAIGTIDRRKVVILFSVLLTLSCLLVSFAESFTLLLLGRACL GLGLGGFWAMSASLTMRLVPARTVPKALSVIFGAVSIALVIAAPLGSFLGGIIGWRNVFN AAAVMGVLCIIWVWKALPSLPGEAAHHKQNMFALLKRPGVLAGMTAIFMSFAGQFAFFTY IRPVYMTMAGFDVDGLTLVLLSFGIASFVGTSLSSQFLKRSLKVALAGAPLVLALSAAVL VLWGSDKWVASAIAIIWGFAFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAA VGGVALDHLGLTSPLVISGTLMLLTALLVAGKVKAK >gi|333596726|gb|GL892086.1| GENE 296 345579 - 346895 1517 438 aa, chain - ## HITS:1 COG:paaK KEGG:ns NR:ns ## COG: paaK COG1541 # Protein_GI_number: 16129359 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Escherichia coli K12 # 1 434 1 434 437 872 95.0 0 MINTTKLDPIETASMDELQALQTARLKWTLNHAYHNVPMYKRKFDAAGVHPDDFNELADL QKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARS LRAAGGSAKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDM IMVTPSYCLNLIEELERQMGGDASACSLRVGVFGAEPWTQAMRREIEKRLGITALDIYGL SEVMGPGVAMECLETADGPTIWEDHFYPEIVNPNDGTPLADGEQGELLFTTLTKEALPVI RYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQL EVNRRGHLDSLSVKVELKQSSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPR SEGKACRVFDLRKVAANG >gi|333596726|gb|GL892086.1| GENE 297 346922 - 348127 1431 401 aa, chain - ## HITS:1 COG:paaJ KEGG:ns NR:ns ## COG: paaJ COG0183 # Protein_GI_number: 16129358 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 401 1 401 401 639 85.0 0 MRDAFICEGVRTPIGRYGGGLSSVRADDLGAVPLRALLARYPQLDLERIDDVIFGCANQA GEDNRNVARMSALLAGLPQTVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESM SRAPFVMGKATAAFQRQAEIFDTTIGWRFVNPLMHQQYGTDSMPETAENVAELLNISRAD QDAFALRSQQRTARAQQNGVLAQEIIPVQVAGKKGAVTEVSVDEHPRAETTLEQLAALKT PFRKNGVVTAGNASGVNDGAAALIIASEPMALAQGLTPRTRIVAMATAGVEPRLMGLGPV PATRKVLERAGLSITDMDVIELNEAFSAQALGVLRQLGVPDDAEHVNPNGGAIALGHPLG MSGARLALAASNELHRRGGRYALCTMCIGVGQGIAMILERV >gi|333596726|gb|GL892086.1| GENE 298 348127 - 348549 518 140 aa, chain - ## HITS:1 COG:paaI KEGG:ns NR:ns ## COG: paaI COG2050 # Protein_GI_number: 16129357 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 140 1 140 140 219 81.0 1e-57 MSHNAWHNARAMYERDACAQAMGMDIIDMGEGYAVVTMTITPQMLNGHKTCHGGQLFSLA DTAFAYACNSQGLAAVASGCAIDFLRPGFAGDKLTATARVKHQGKLTGVYDIEIQNQHQK AVALFRGKSHRTGGSVTGEA >gi|333596726|gb|GL892086.1| GENE 299 348539 - 349963 1553 474 aa, chain - ## HITS:1 COG:ydbU KEGG:ns NR:ns ## COG: ydbU COG1250 # Protein_GI_number: 16129356 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 1 474 2 475 475 750 79.0 0 MVNIDTVAVIGSGTMGAGIAEVAASHGHPVLVYDIDAAAISRAIDGIRQRLSSRVARGKL SADAGEQILARLTPVTNINALAKADLVIEAASERLEVKKALFKQLAEVCPPQTLLASNTS SISVTAIAAEISHPERVAGLHFFNPAPVMKLVEVVSGLATSSEVADALCELALRWGKQPV RCQSTPGFIVNRVARPFYSEAWRALEEQVATPEAIDAALREGGGFPMGPLELTDMIGQDV NFAVTCSVFNAFWQERRFLPSLVQQELVLAGRLGKKCGQGVYRWQEEKPAVSWLAPVSDS FSPMRAQRRSDGVTEIDDLLLIETQGETAQSLALRHGCPVVVVDRIERDVAVIAAAPGNP HSATQKAIYWLQHQQKRVLQIADYPGLLIWRTVAMIANEALDTLQKGVASEQDIDTAMRL GVNYPCGPIAWGERLGWQRLLTLLENLQRHYGEERYRPCSLLRQRALLESSYES >gi|333596726|gb|GL892086.1| GENE 300 349965 - 350750 894 261 aa, chain - ## HITS:1 COG:paaG KEGG:ns NR:ns ## COG: paaG COG1024 # Protein_GI_number: 16129355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 261 2 262 262 432 87.0 1e-121 MESILSHVEQGVMTITLNRPERLNSFNDVMHQLLSDCLKQAERDDTIRCLLITGAGRGFC AGQDLNDRNVDPNGPAPDLGMSVETFYNPLVRRLARLPKPVICAVNGVAAGAGATLALGC DMVIAARSASFVMAFSKLGLVPDCGGTWLLPRVTGRARAMGLALLGDKLSAEQAQAWGMI WQVVDDEELSATAQQLALHFASQPTFGLGLIKQAINAAETNTLDAQLDLERDYQRLAGRS DDYREGVSAFLAKRAPNFTGK >gi|333596726|gb|GL892086.1| GENE 301 350753 - 351520 955 255 aa, chain - ## HITS:1 COG:ydbS KEGG:ns NR:ns ## COG: ydbS COG1024 # Protein_GI_number: 16129354 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 255 1 255 255 381 84.0 1e-106 MSELIVTRHGRVLQLTLNRPAARNALNNALLTQIAEQLETAAADAEIAVCVIYGNERCFA AGADLNEMAEKDLPATLNDIRPQLWARINAFTKPLIAAVNGFALGAGCELALLCDVVIAG DNARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLTGESITAVEAHSAGLVSDVFPA SLTLEYALKQATLMARHSPLALQAAKQALRQSQEVPLQAGLAQERQLFTLLAATDDRREG INAFLQKRTPDFKGR >gi|333596726|gb|GL892086.1| GENE 302 351517 - 352587 1162 356 aa, chain - ## HITS:1 COG:paaE KEGG:ns NR:ns ## COG: paaE COG1018 # Protein_GI_number: 16129353 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 356 1 356 356 621 86.0 1e-178 MTTFHSLTVAKVEPETRDAVTITFAVPQALQEAYRFRPGQHLTLKASPGGDELRRCYSIC RSTAPGEISVAVKAIEGGRFSRYARDEIKPGMALEVMVPQGQFGYQPQAEREGHYLAIAA GSGITPMLAILSATLATETHSHFTLIYGNRSSQSMMFRRALADLKDKYPQRLQLIAIFSQ ETLDSDLLHGRIDGEKLQALAKRLVNFRQYDEAFICGPSAMMDEAEAALKALGMPEKAIH LERFNTPGTAVKRTVSVQADGQKVTVRQDGRDREITLTADDESILDAALRQGADLPYACK GGVCATCKCKVLRGKVDMATNYSLEPDELAAGYVLSCQALPLTADVIVDFDAKGMA >gi|333596726|gb|GL892086.1| GENE 303 352595 - 353092 499 165 aa, chain - ## HITS:1 COG:paaD KEGG:ns NR:ns ## COG: paaD COG2151 # Protein_GI_number: 16129352 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Escherichia coli K12 # 1 165 3 167 167 282 81.0 2e-76 MQRLVDIAPAQIPQIWALLSQIPDPEVPVLTITDLGMVRSVKAQGEGWVIGFTPTYSGCP ATEHLLGAIRETLTGNGFAPVHIVLQLEPAWTTDWMTEDARRRLREYGISPPVGHSCHAH VPAEVSCPRCASTDTSLISEFGSTACKALYRCNTCREPFDYFKCI >gi|333596726|gb|GL892086.1| GENE 304 353104 - 353850 1030 248 aa, chain - ## HITS:1 COG:ydbP KEGG:ns NR:ns ## COG: ydbP COG3396 # Protein_GI_number: 16129351 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 248 1 248 248 401 80.0 1e-112 MNNVSAYALRLGDNGLVLSQRLGAWCGHAPELEIDLALANIGLDLLGQARNFLTYAAERE GKGDEDALAYGRDERQFRNLLLVEQPNGSFADTIARQYLMDAWNVALYERLIHSRDSQLA AIAAKAIKEARYHLRFSRGWLVRLGDGTETSAQKMQQAVDNLWRFTAELFDADDVELALT EEGVAVDPRDLREPWEREVFAGLSEATLRVPEEVAYRTGGKKGLHTEHLGPMLAEMQYLQ RVYPGQQW >gi|333596726|gb|GL892086.1| GENE 305 353859 - 354146 345 95 aa, chain - ## HITS:1 COG:ynbF KEGG:ns NR:ns ## COG: ynbF COG3460 # Protein_GI_number: 16129350 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme of phenylacetate metabolism # Organism: Escherichia coli K12 # 1 95 1 95 95 184 96.0 3e-47 MSNVYWPLYEVFVRSKQGLSHRHVGSLHAADDRMALENARDAYTRRSEGCSIWVVKASEI VASQPEESGEFFDPAESKVYRHPTFYTIPDGIEHM >gi|333596726|gb|GL892086.1| GENE 306 354159 - 355142 1095 327 aa, chain - ## HITS:1 COG:ydbO KEGG:ns NR:ns ## COG: ydbO COG3396 # Protein_GI_number: 16129349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 19 327 1 309 309 599 93.0 1e-171 MIHHFATCGDITNHKGGYVTQEQRFEQRIAQETAIEPQDWMPEAYRKTLIRQIGQHAHSE IVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGKM KYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQG FEACMALAQGSEAQRQMLQDAINRFWWPALMMFGPNDDNSPNSARSLAWKIKRFGNDELR QRFVDNTVPQVEMLGMTVPDPDLRFDEESGHYRFGEIDWQEFDEVINGRGICNHERLAAK RKAWDDGAWVREAALAHAEKQRARQAA >gi|333596726|gb|GL892086.1| GENE 307 355374 - 357416 2265 680 aa, chain + ## HITS:1 COG:maoC_1 KEGG:ns NR:ns ## COG: maoC_1 COG1012 # Protein_GI_number: 16129348 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 500 1 500 500 832 88.0 0 MQQLASFLSGTWQSGRGRARTITHAISGETLFEVTSEGLDMAAARRYAIEHGGEALRAMS FIERAAMLKAVAKHLLSQKDRFYALSAQTGATKADSWVDIEGGIGTLFTYASLGSRELPD DTLWPEDELIPLSKEGGFAARHVLTSKSGVAVHINAFNFPCWGMLEKLAPTWLAGMPAII KPATATAQVTQAMVKAIVESGLVPDGAISLICGGAGDLLNQLDSQDVVTFTGSASTGQSL RVHPNIVANSIPFTMEADSLNCCVLGEDVTPEQPEFALFIREVVREMTAKAGQKCTAIRR IIVPEAQDEAVSQALIARLEKVIVGDPAQEGVKMGALVNSEQRADVQEKVDHLLAAGCQI RLGGKADLQAAGAFFPPTLLFCPQPDETPAVHSTEAFGPVATLMPYRNTEHAMQLARAGG GSLAGTLVTADTHVARQFIAGAARAHGRIQILNEESAKESTGHGSPLPQLVHGGPGRAGG GEELGGLRAVKHYLQRTAIQGSPSMLAAIGKQWVRGAGVQEDRVHPFRKYFEELQPGDSL LTPRRTLTEADIVNFACLSGDHFYAHMDKIGAAESIFGERVVHGYFLISAAAGLFVDAGV GPVIANYGMENLRFIEPVKPGDTIQVRLTCKRKTLKKQRTAEEKPTGVVEWAVEIFNQHQ QAVALYSILTLVARQQGDFS >gi|333596726|gb|GL892086.1| GENE 308 357612 - 359885 2677 757 aa, chain + ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 1 757 1 757 757 1331 84.0 0 MGSNSSFSARRTALAIAVALCCAWQSPVYAHGSEAHMVPMDKTLQAFGADVQWDDYAQMF TIAKDGAFVKVKPGANTAIVNGKPLTLQVPVVMKDNKAYIPETFINDVFQSGLDQTFQVE KRPHPLNALTADEIKQAVAIVKASADFKPNTRFTQIALAEPEKAKVWDFVLNGTAVDAPR QANIVMLDGKHIIESRVDLKDKKILRWEPIKDAHGMVLLDDFNTVQQIINESPEFAAVLK KRGITDPKNVITTPLTVGFFDGKDGLKQEDRLLKVISYLDVGDGNYWAHPIENLVAVVDL EQKKIQKIEEGPVVPVPLTPRPYDGRDRVETVKKPLEIIEPEGKNYTITGDMVHWQNWDF HLSLDSRVGPMISTVTYNDNGKKRQVMYQGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMG TLTSPLVRGKDVPSNAVMLNETIPDYTGAPMEIPRAIAIFERYAGPEYKHQELGKPNVST ERRELVVRWVSTVGNYDYIFDWVFHENGTIGIDAGATGIEAVKGVQTKTMHDATAKDDTK YGTLIDHNIVGTTHQHIYNFRLDMDVDGVNNKLVAMDPDVKPNTAGGPRTSTMQVNQYDI DTEQQAAQKFDPGTIRLLSNTRKENRMGNPVSYQIIPYAGGTHPVASGAKFAPDEWIYHR LSFMDKQLWVTRYHPDEMYPEGKYPNRSTHDTGLGQYSKDNESLNDQDNVVWMTTGTTHV ARAEEWPIMPTEWVHTLLKPWNFFDETPTLGKKKEQK >gi|333596726|gb|GL892086.1| GENE 309 360006 - 361112 934 368 aa, chain + ## HITS:1 COG:slr1760 KEGG:ns NR:ns ## COG: slr1760 COG3706 # Protein_GI_number: 16329649 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Synechocystis # 194 365 133 310 315 134 40.0 3e-31 MEKRHNATPEPATWPTRKSMVVHGLAVNLPWLAFVNTSFAIMVLLRNSLFGQIDTLFHIT PHLQLIVDATMLGVIILNGALVLMAWRHMRGVSAVLFLCGVLWSLCCYWFIYVIQLPHPW PIFVTLLMAGMTALYFHPVALLCFTVPLWITMPVASMLLNQEINYRFVGTWVVFTFILVC GRYILLSWFEEAWRRNQQNQRLISRLDALAHQDPLTKTANRRAMELVLENAVEQGKRFAV LMLDVDYFKLYNDTYGHQAGDACLARVAEVLNTSVRTPEDVVSRYGGEEFVVILFDCEAS VAEKVAARIQAGLRTAAIPHSASKVSECVTVSTGIAGYTAGLAGPEIIARADAALYRAKE AGRDRWSL >gi|333596726|gb|GL892086.1| GENE 310 361193 - 362692 1720 499 aa, chain - ## HITS:1 COG:feaB KEGG:ns NR:ns ## COG: feaB COG1012 # Protein_GI_number: 16129346 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 499 2 500 500 887 88.0 0 MSESHVAVLPGVQQFLDRQHGLWIEGRQAASDSEKRLNVYNPATGEVIASTADASVDDVD RAVMSGWRAFVARSWAGRLPAERERILLRFADLVEQHGEELAQLETLEQGKSINISRAFE VGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIG MWKVMPALAAGCSIVIKPSETTPLTLLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSH PRIAKVSFTGSTATGKQIARAAADTLTGVTLELGGKNPAIVLKDADPAWVIEGLMTGSFL NQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLSVGPGMSPEAFINPLVSRAHCDKVQAF LDEAKAHNAQLIAGNRGPDGKGYYVSPTLVVNPDNHLRLTREEVFGPVVNLVRVADGEEA LQLANDTEYGLTASVWTQNISKALAYTDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRD FGPDWLDGWCETKSVCVRY >gi|333596726|gb|GL892086.1| GENE 311 362934 - 363842 826 302 aa, chain + ## HITS:1 COG:feaR KEGG:ns NR:ns ## COG: feaR COG2207 # Protein_GI_number: 16129345 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 8 302 7 301 301 401 66.0 1e-112 MACASEQDNFQQWLAQINQVCGRFAARPLEGAFFGELETSYTQSLKLSTVTAAGVNLFRT SQEIKNGNDAWFYTVFQLEGSAGIEQDDRRAMLKAGDITLIDASRPCSIYWQERSRQISL LLPRQLIEQHARFQEVRCALPLSRTLPTVQLSYRLLQESMGNADLSASESEAALEAMVCL LRPAFQQHDEVLPRKERQFRHVLSLIDDHIQSEALRPEWIASESGMSVRSLYRMFAGKGL VVAQYIKNRRLDLCAQALRSIGDDEKLAGIGYSWGFTDHSHFSTAFKQRFGVSPGEYRKR YR >gi|333596726|gb|GL892086.1| GENE 312 363843 - 364142 347 99 aa, chain - ## HITS:1 COG:STM1644 KEGG:ns NR:ns ## COG: STM1644 COG3784 # Protein_GI_number: 16764988 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 14 99 22 107 107 124 74.0 6e-29 MLLALGMNVHAATLTLNDARAQGRVGETLSGYLAPVQHDAETLALVNRINAARTESYQQL ADSNNLPVDEVAKMAGQKLVARAQPGEYVKGINGKWLKK >gi|333596726|gb|GL892086.1| GENE 313 364168 - 364359 206 63 aa, chain - ## HITS:1 COG:no KEGG:ECL_02163 NR:ns ## KEGG: ECL_02163 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: E.cloacae # Pathway: not_defined # 4 63 2 61 61 99 93.0 5e-20 MKKRAGVLTVAVVALLSGCTPRIEVAAPKEPITINMNVKIEHEIHIKVDKDVEALLKTRS DLF >gi|333596726|gb|GL892086.1| GENE 314 364356 - 366995 2519 879 aa, chain - ## HITS:1 COG:no KEGG:ECL_02164 NR:ns ## KEGG: ECL_02164 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 879 1 879 879 1527 88.0 0 MKGKYKAAIALLLLLFLVPLTLLMTLAQWVPTLAGIWLPVGTRIAFEKSPRLTRHALIIP DLRYLVEECEIARMENVTLSHPSRWDLDIGALELNSVCLSKLPQSAPSTVAPKTLAQWQA ILPNTWLTIHRFTLSPWQQWEGELHASLTPARQDITYKGEQVSVKGQLRGQTLSISQFDV HLPDQPQPVKLVGEFTLPLVPDGVPVKGHTVATFNVPQLSSLVDADLDWEDNQGQLVVMA RDNPEPLLDLPWQITAQQLTISDGRWNWSASGMPMSGRVGLKVDNWQQGLEKATFTGRLN VLTQGDAGKGNAVLNIGPGSLSMENSAMPLHLSGEAKQNDLILYARLPAQLTGSLYEPQL TFEPGALLRSRGRIIDSLDIDEIRWPLAGVKLTQKGVDGRLQAILRAHENEMGDFELHLD GQANDFLPDNGLWQWRYWGKGNFTPMNARWDVRGTGEWRDNVIELTDLSTGFDKLQYGTM LVSKPRLVLDHPVRWSRDPENPTFSGALALNAGQTSFSGGSVLPPSVLTFSVDGTDPTVF QFKGKLHADDIGPVQVNGRWDGERLRGQAWWPKQSLTVFQPLIPPDWKMTLRGGEMYAQV AFSAAPDQGFEAGGHGVLNAGSAWMPDNEINGVDFVLPFRLSQGTWSLGTRGPVTLRIDE VKNLVTARNITADLQGDYPWTEANPLLLTNVKVEALGGKITMQQLRMPQHDPALLRVDNI SSSELISAVNPKQFAMSGPVSGALPFWLDNEKWIIKDGWLTNPGPMTLRIDQDTADAIVK DNVVAGAAINWLRYMEISQSWTKLNVDNLGVLTMQATIKGTSRVEGKSSFVNLNYTHEEN IFTLWRSLRFGDNLQTWFEQHAAIPLLRSSTGKESEEQQ >gi|333596726|gb|GL892086.1| GENE 315 367206 - 368195 1191 329 aa, chain + ## HITS:1 COG:STM1647 KEGG:ns NR:ns ## COG: STM1647 COG1052 # Protein_GI_number: 16764991 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 328 1 328 329 626 92.0 1e-179 MKLAVYSTKQYDKKYLQHVNETYGFDLEFFDFLLTEKTAKTAHGCEGVCIFVNDDGSRPV LEELKKQGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYSPEAVAEHAIGMMMSLNRRI HRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAALRILKGFGMRLLAFDPYPSAA ALELGVEYVDLKTLFSQSDVISLHCPLTPENYHLLNQSAFDQMKDGVMIINTSRGGLIDS QAAIEALKTQKIGALGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT AEALISISETTLGNLRQLEKGEACPNAIV >gi|333596726|gb|GL892086.1| GENE 316 368320 - 368991 76 223 aa, chain - ## HITS:1 COG:no KEGG:EbC_17750 NR:ns ## KEGG: EbC_17750 # Name: not_defined # Def: hypothetical protein # Organism: E.billingiae # Pathway: not_defined # 89 220 23 153 184 145 55.0 1e-33 MGYELATPNPLLMSSGIFKGELVLNVGPGGEIDFGDNYEPSDTTLVLNFTLSVNHELKLS TTAENQNVSLIPCEPGKVCTAGQGDARWERWMVNRITPNLTGQSKFNLSSSGSFTVYLQC EQNLGSDCALKSDKLPSQWVPVQALLTLPDNIVDDKTGTGVVRRRLAIGKDLTKNLFLTN VFGQEKAGSIDFLIEQKDVDTMLNTRPDVYRGAVTVIFDPLIY >gi|333596726|gb|GL892086.1| GENE 317 369646 - 371931 950 761 aa, chain - ## HITS:1 COG:no KEGG:Pfl01_4570 NR:ns ## KEGG: Pfl01_4570 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens_PfO1 # Pathway: not_defined # 3 758 72 841 856 329 32.0 3e-88 MAQVYLNDTLLFEAAISLTESGDVRLIRTIEESESVDSDVRNRWKEVLDKGISVGECTNQ CPSGLMAAEYLLDSSILKLYTSHYETARTENSFISLPEKMPGGMIMYNDITATNSDNTRS WGINSSLTTSLLGWSQRVSFQSSGTDGQYHYSSSTLYELYSQKELPGHFVRLGFFTPDSD TGNVEMSGFGYDTVVGAMWGTSDALLINGDSVSAWPVYVTGQNQSVAEVWRDGRLIHTQQ LETGVQALDTRRLPGGIYDITIKIIENGKTVDTQQAQIYKPQGWNNPDKRWRMNLWGGQQ QTIGTSTRYGNDNPHPAAAGGGIDYLVHPRVVMGVSGAATENEHQVRVRSNVTLTPSDSL FAQYTTGNNDVQSNQNTDIRYYRTIPGGGAASLYWRSTTTDVYGHQTRYRQQGDTWGASL SLRLPWTTSLTVNGQYTETAWRQGFGADVATTTLGTLAGRNMNFRVSAWDRPGFSNGRRD HGMSVGLSLSLAPSSRHAVSAETGMNQNHGYSSLSYQYQPDESSTLRTVGGGVSYSAKNT VFNANGSVDTPFVSADGWVQHHTQNSSNTAGGNLSQVLMLGGGKLASSSGSASRSTGAAL IVDVDSDHNDIGILASGKMSETRLLPGRNVVPAEQWRKEVIQFSATGGDSVRVFPEQQSI QLNKGSVQYVQVKAVKTYTLVGTLQDDQGELLKNRFVESDISGAVINAEGVLTLETGSKN KTLLLREEGGKPPLKCSIPAADNAGNNAIRFVEDLKCSVMN >gi|333596726|gb|GL892086.1| GENE 318 372118 - 372645 451 175 aa, chain - ## HITS:1 COG:no KEGG:PSEBR_a4520 NR:ns ## KEGG: PSEBR_a4520 # Name: not_defined # Def: hypothetical protein # Organism: P.brassicacearum # Pathway: not_defined # 28 175 21 162 162 74 30.0 1e-12 MNRQFNVIKTTLAAAFISCAAMTGAANATESQSYTINLSATVPSDTFQVIPVDAGWIDQT QDMGYDIASSKLQIFEKPFQYKNTAGAIQATLTGNLNSDGKPQLSNGTDVIPLAVSFNNT PLSKTATEVVSESAAKAGGRTSLKITQADDAALTVNGMFTGSVAMIFEPVVAVTP >gi|333596726|gb|GL892086.1| GENE 319 372711 - 373079 75 122 aa, chain - ## HITS:1 COG:no KEGG:HDEF_0288 NR:ns ## KEGG: HDEF_0288 # Name: not_defined # Def: hypothetical protein # Organism: H.defensa # Pathway: not_defined # 2 121 99 217 218 138 54.0 6e-32 MPQAEDGFGLDSKAAGQYREETLQAGVNILTGYGSVVIVQPEKPAFNTLIKQSDSGGVSV VNKGNATVVLEDIRQCKSANTDCGEVSREFILPGRSYSVAGKNGFKTNFTLIEGNNKQAK SF >gi|333596726|gb|GL892086.1| GENE 320 373381 - 373587 116 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPIIGAALTEVEIIPKDKTTPAAFKNFLNFMPVCSPFSICFGVVFDGGNFTTKALRRNYY IKIIGFIG >gi|333596726|gb|GL892086.1| GENE 321 373726 - 374502 210 258 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_0392 NR:ns ## KEGG: Rahaq_0392 # Name: not_defined # Def: CadC family transcriptional regulator # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 244 3 274 293 100 27.0 9e-20 MLFIIEDRVYFRIDDGALWEKNDEGAKVILSPIVARLLHLFLQEKGRVVTREEIMNYVWE KHGLEPSNNSLNQYVSQLRKLMAHFQLPDETLRTVPREGFILSHELTIRTENDSLSFTPA SLSEESHHLKQKIKPPMGNWAIFFLLLILIATPVVVIFSTDMMHKQSMSITPTKIGHVGN CPVYAVLMGRNAQLNEALSSAKDYIGQNNISCNDDSILYFFSTGGVLKNQSGRAFLSHCY MKDNEIISCMDYAYHSWM >gi|333596726|gb|GL892086.1| GENE 322 374506 - 374994 178 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNNVNSLFKNRKLIIFMLLLLIFMVGIITSLQYRHRLLIDCDSDFVFRAPQNQYEMKGTM KLKMDRDRQGHIRIDGVVTSPDGKTWISRDAIFTYHKLNATSFRMDNLRIIKGERDTASD KHFAENFYSLAVKTRRVLTIHRIENGYLVGNYRAPIFMCITL >gi|333596726|gb|GL892086.1| GENE 323 375074 - 375247 212 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16760699|ref|NP_456316.1| hypothetical protein STY1938 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 57 1 57 57 86 75 5e-15 MNVDALTQKAEEEISALITKKISELRKKTGQEVSEIEFIAREAMTGLEGYEVKIKLI >gi|333596726|gb|GL892086.1| GENE 324 375552 - 375830 307 92 aa, chain - ## HITS:1 COG:no KEGG:KPN_00497 NR:ns ## KEGG: KPN_00497 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 92 1 90 90 112 66.0 6e-24 MKKALLGSVLALTVASFGASAADMISKDEAHHFKLEYLGNVSVGASGGQISSPSDLHQKL SKLADEKGGKYYVIIAAREHGPNFQAVAEVFK >gi|333596726|gb|GL892086.1| GENE 325 376058 - 376648 508 196 aa, chain + ## HITS:1 COG:no KEGG:Ctu_28590 NR:ns ## KEGG: Ctu_28590 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 186 1 187 192 177 74.0 2e-43 MHTSKTLKGLLAVSAVAAMFSTVGVQAQTTSAAQTQTAGQAKPDARLSSGDEKALKDMAQ ANINEVAAARLALDKAQTSEVKTFAQKMVDDHGAALTKVQAVAQKKGVELPTEPDAAHKA LNSRLENQKGDAFDKMYMEYAGVKDHEKVLSKLKSDASKIDDPDVKALANEHTPVVEQHL KSAEQMSTHSGASADK >gi|333596726|gb|GL892086.1| GENE 326 376722 - 378779 2375 685 aa, chain - ## HITS:1 COG:AGl1436 KEGG:ns NR:ns ## COG: AGl1436 COG4993 # Protein_GI_number: 15890840 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 76 684 166 778 778 365 37.0 1e-100 MTALALLAAPLALQAQDKAAEASQGTQESLNIDAADQQAPGTTKTTDDASTGNGGEQKAA STSQPATPLVPGTATWDSFHGQLNAQKYSPLTQITADNVGKLTKVWEFHTGDVSDGKGDT PATVWSATPIFANDTLYIGTPFDRLIALDPGTGKEKWHYDTKSSRKALTQPVLKNRGVSY WQAKNPVNGQACQKIVYMGTVDGKLFALDADSGKPCSDFADNGVLDLNQWNTVNAKYPLS VLQPPTVVGNHLLVGWAGKDWAYAEAPPGTVFSVNARTGKLEWTFEAIPAEIRKRTGTAN VWTHMSADEANGLVYLPVSSPSPNYWGGNRADAIPLGTSTTALDINTGKVVWSRQWVHHD VWDYDINSAPTLMDITVDGKQIPALIQATKQGFLFVVNRLTGEDVWPIEERPVPQGDGSV QGEVLSPTQPFPTKPAPLLDQSKKPAIWKLADIVGGGQCSRLWDNLTYEGMYTPPTTKGE GTLTYPDSAGGVQWGGVAFDPQKQIAIVNTSHIVQYVKLYSREDYDNADKDSGNESGFAP QEGAPYGMRLLVASNWLGMPCWQPPFGEIVALDMHTGDVKWRRPVGASQQYGFFMPESWG SPTIGGPAVTAGGVIFIGASMDAKVRAYSVESGDELWSDQVEAPAVANPSVYEYKGRQYV AFVAGGNTILKDQVGDQVVVYALPE >gi|333596726|gb|GL892086.1| GENE 327 378829 - 379194 401 121 aa, chain - ## HITS:1 COG:no KEGG:Csal_0171 NR:ns ## KEGG: Csal_0171 # Name: not_defined # Def: hypothetical protein # Organism: C.salexigens # Pathway: not_defined # 1 121 1 121 121 73 44.0 3e-12 MLHSQSSRVGSILLLLTAIIAFALALYAWWTPLTGVTGTIGALGVVIASVVLAILTLLLR AASRRGARVFLIIVTLVVLVGIGFAAALLHQYIITAAMVVGLIGLIMLSSHSARYNHPVR S >gi|333596726|gb|GL892086.1| GENE 328 379831 - 381093 1518 420 aa, chain + ## HITS:1 COG:YPO1321 KEGG:ns NR:ns ## COG: YPO1321 COG0814 # Protein_GI_number: 16121603 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Yersinia pestis # 4 419 7 428 433 215 32.0 1e-55 MNKATTLSGTITTRSNWHWQDNIWTLGLYGTAVGAGTLFLPVEIGTRGPVIFLVMLLLGL PLSLIPHLLLCRVYMREEKTENGTLPIFGSFFSGRGEKLITLFYCVTFFPVTLVYGVALI NALDNLLVEHLHITAISRGPLSFIVVAALYVVLSKGRDRVVAIMSALALPFAASVLLIAV SLIPGWHLSNLTGTAAEITAAPLPVTLKNIWLTLPLITFSFCCAPMVSPLSSYYRERKAE GEKKALFVIRIAYFAIFASILFFVLSCVLGIPHESFARAKAENLNVLSVMKGNGDFSLIY HIAPLIAIIGMTKSFLGVGLSVAQTFGQLAASVSGKKARASKRLASLALFLLTYGIVYAN PDVLSLIEMFCGPLIAVILFLIPAYLIYTRPALAELRGVTVFLVVLGGLATLCALLWTML >gi|333596726|gb|GL892086.1| GENE 329 381180 - 381419 343 79 aa, chain + ## HITS:1 COG:no KEGG:Ctu_26810 NR:ns ## KEGG: Ctu_26810 # Name: msgA # Def: virulence protein MsgA # Organism: C.turicensis # Pathway: not_defined # 1 79 1 79 79 128 86.0 8e-29 MFVELVYDKRNVQGLEGAREIILAELTKRVHRIFPDASVTVKPMQANGLNSDASKSDREK LNRMLEEMFEESDMWLTQE >gi|333596726|gb|GL892086.1| GENE 330 381445 - 383496 2259 683 aa, chain - ## HITS:1 COG:dcp KEGG:ns NR:ns ## COG: dcp COG0339 # Protein_GI_number: 16129497 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli K12 # 1 676 1 680 681 963 72.0 0 MSVNNPFFEISLLPYQAPRFDAINDSHYRPAFDEAMRLKRADIDAIITQRAEPDFDNTVL ALEKSGAMLSRVNSVFFAMTSAHTNDYLQALDEQFSTELAGLANDIWLNDTLFARVEAVW QEREGLDAESRRLTEETYQHFVLAGARLNADEKAELKALNTEAATLTSQFNQRLLAANKA GGLVVDNVHALDGLSAEEIAAAAHAAAEKGLTDSWLIPLLNTTQQPALAALSQRETRKKL FNAGWERTQKGDENDTRDLIRRLTALRARQAQLLGFENFASWSIADQMAKTPDAALEFMR GIVPAARSRAALEQADIQKVIDDEQGGFSVEAWDWAFYAERVRSAKYALDEAQIKPYFAL NTVLEDGVFWSATQLFGIRFVERFDIPVYHPDVRVWEIFDHTGEGMALFYGDFFARDSKA GGAWMGNFVEQSYEFAARPVIYNVCNYQKPANGQTALISWDDVITLFHEFGHTLHGLFAS QRYATLSGTNTPRDFVEFPSQINEHWASHPQVFAHFARHYQTGEPMPDALREKMLNATQF NKGYDMTELLSAALLDMNWHGIQKPVEDVEAFEAAALKKEGLDLPAVPPRYRSSYFAHIF GGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGQKFREAILSRGNSTDLAELYRQWR GHDPRIEPMLENRGLSAPGGIEG >gi|333596726|gb|GL892086.1| GENE 331 383640 - 384386 1083 248 aa, chain + ## HITS:1 COG:STM1511 KEGG:ns NR:ns ## COG: STM1511 COG4221 # Protein_GI_number: 16764856 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Salmonella typhimurium LT2 # 1 247 1 247 248 446 89.0 1e-125 MIILVTGATAGFGESITRRFVANGHKVIATGRRQERLQELKDELGDSILTAQLDVRNRAA IEEMIASLPAEWREIDVLVNNAGLALGMEPAHKASVEDWENMIDTNNKGLVYMTRAVLPG MVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAIRVTDVEPGLV GGTEFSNVRFKGDDAKADKTYENANALTPEDITETVWWVATLPKHVNINTVEMMPVSQTY AGLSVHRG >gi|333596726|gb|GL892086.1| GENE 332 384477 - 385163 570 228 aa, chain + ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 357 83.0 1e-98 MAAESQLNPTQPVNQQIYRILRRDIVRCLIPPGTPLSEKEVSVRFDVSRQPVREAFIKLA ENGLIQIRPQRGSYVNKISLSQVRNGCFVRQAIECAVVRRAASLINDNQCYLLEQNLHQQ RIAIDRKQLNDFFQLDDEFHQKLAQIAECQLAWDTVENIKATIDRVRYMSLDHVSPPEML LRQHHDIFSALEKRDVEAVDRAMTLHLQEISESVQLIRQENREWFSEE >gi|333596726|gb|GL892086.1| GENE 333 385199 - 385612 393 137 aa, chain - ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 137 7 142 142 144 52.0 7e-35 MPVDVFEMDLSDKAVRHAVNLAKAEGTTITLVNILPNSSRSLLRGFNADIKKFEEYMTAE SDKKMKALKRLFDMSPDDIDCEVRFGNVRDEIIKLSKEGKYDVIVIGSKNPSITTHLLGS NAETILRYATIPVLVVR >gi|333596726|gb|GL892086.1| GENE 334 385918 - 386121 306 67 aa, chain + ## HITS:1 COG:no KEGG:ECL_02177 NR:ns ## KEGG: ECL_02177 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 67 1 67 67 111 89.0 8e-24 MMTYDRNRNAITTGSRVMISGTGQFGVIKAIHSDGLNAEQVRRGKTVEVEGCEGKFEPIE LIRLGMH >gi|333596726|gb|GL892086.1| GENE 335 386166 - 387629 1691 487 aa, chain - ## HITS:1 COG:ECs2151 KEGG:ns NR:ns ## COG: ECs2151 COG0246 # Protein_GI_number: 15831405 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 806 81.0 0 MENRLLQAKATRPQYDRDSLKARIVHLGFGAFHRAHQAVYTDILAAEQGSDWGYCEVNLI GGEQQIADLKAQDNLYTVAEMSADAWTARVVGVVKNALHAQVDGLETVLAALCEPQVAIV SLTITEKGYCHSPASGQLMLDHPLIVADLQNPHQPKSAPGVVVEALARRKAAGLPAFSVM SCDNMPENGHVMRNVTCAYARAVDGELADWIEANVTFPSTMVDRIVPAVTAETLDKIEQL TGVRDPAGVACEPFRQWVIEDNFVAGRPAWEKAGAELVSDVIPFEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMEDEHYRAAAHALMLKEQAPTLKVKGVDLGRYADQLIARYSNPALR HRTWQIAMDGSQKLPQRMLDSVRWHLVHQKPFPLLALGVAGWMRYVGGVDEQGNAIEVSD PQLAVIQAAVNGSAEGESRVSALLGIEAIFGNELPKDAVFVDAVMQAYHTLLQKGAKATV AEYAARL >gi|333596726|gb|GL892086.1| GENE 336 387852 - 389231 1713 459 aa, chain - ## HITS:1 COG:ydfJ KEGG:ns NR:ns ## COG: ydfJ COG0477 # Protein_GI_number: 16129502 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 29 443 1 412 427 660 84.0 0 MTQAQPQRSTSDLVKAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAM GTYGAGYIARIVGAFIFGRMGDSIGRKKVLFITITMMGICTTLIGVLPTYAQIGIFAPVL LVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAIWAVMFFA LDREELIAWGWRVPFLASVVVMIFAIWLRMNLKESPVFEKVNDAETVTPVAAQDTSLGAM FKSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFDKAIPTDALMISSILGFLSIPLL GWLSDKVGRRLPYIILNISAIILAYPMLSIIVDKSYAPGVIMLSIIVIHNFAVLGLFALE NITMAEMFGSRNRFTRMAISKEAGGLVAVGFGPVLAGIFCNMTGSWWPIVAMLVAYSLIG LISALMMPEVRDRDLSEAEDAAEATHKEAVAYGALSSRR >gi|333596726|gb|GL892086.1| GENE 337 389305 - 390324 1165 339 aa, chain - ## HITS:1 COG:STM1506 KEGG:ns NR:ns ## COG: STM1506 COG1063 # Protein_GI_number: 16764851 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 337 1 337 339 589 83.0 1e-168 MKSVVIQQPNALVIEERPLPLPGAGEVRVKIKLAGICGSDSHIYRGHNPFAKYPRVIGHE FFGEIDAVGEGVESTRLGQRVSVDPVISCGQCYPCSVGKPNVCTSLVVLGVHRDGGFSEY AVVPAKNAWHIPDAIPDQHAVMVEPFTIAANVTGQAKPTEQDVALIYGAGPMGLVTVQAL KGVYKVKQVIVIDRIDERLAMAQRSGADWVFNNGEQSLQAALDEKGIKPTLIIDAACHPS ILQEAITLASPAARIVLMGFSSDPSQIVQQGITGKELAIFSSRLNANKFPVVIDWLEKGL IDPEKLVTHTFDYHHVTDAIELFEKDQRQCCKVLLTFDQ >gi|333596726|gb|GL892086.1| GENE 338 390339 - 391553 1499 404 aa, chain - ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 827 94.0 0 MKIVGAEVFVTCPGRNFVTLKITTDEGIVGLGDATLNGRELSVASYLKDHLCPQLIGRDA HRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGHTIDDVLEDYARHKEMGFKAIRVQCGVPGMKTTYGMAKGKGLAYEPATKGAWPEE QLWSTEKYLDFTPKLFDAVRSKFGFNEHLLHDMHHRLTPIEAARFGKSIEEFRMFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRATLTHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPICHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHSWRFD NGYMHPGDKPGLGIEFDEKLAAKYPYEPACLPVARLEDGTLWNW >gi|333596726|gb|GL892086.1| GENE 339 391840 - 392178 355 112 aa, chain + ## HITS:1 COG:no KEGG:SARI_01439 NR:ns ## KEGG: SARI_01439 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 3 112 18 127 127 162 78.0 4e-39 MTTLSKRLCLTAVLALSSFAFAATASAETSKLIIESGDSAQSRQNAAMDKEQWNDTRSLR QKVNKRVEKEWDKEDVAFDARDKCQQSANVNAYWEPNTLRCLDRRTGRTVAP >gi|333596726|gb|GL892086.1| GENE 340 392178 - 392738 478 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116490772|ref|YP_810316.1| acetyltransferase [Oenococcus oeni PSU-1] # 6 168 2 164 167 188 52 7e-46 MSTLCDVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF VVEREGEKAGLVELVEINHVHRRAEFQIIISPEHQGKGLASRAAKLAMDYGFNVLNLYKL YLIVDKENEKAIDIYRKLGFMVEGELIHEFFINGEYRNTIRMCIFQHQHLAGHKSSSASL LKPTAQ >gi|333596726|gb|GL892086.1| GENE 341 392756 - 393379 665 207 aa, chain - ## HITS:1 COG:no KEGG:ECL_02187 NR:ns ## KEGG: ECL_02187 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 207 42 248 248 382 92.0 1e-105 MASFSNEFDFDPLRGPVKDFTQTLFNDKGEVSKRVTGTMSTEGCFDTLELHDLEANTGVA LVLDANYYVDAETQQQKVKLQGKCQLAELPSAGLTWDTDDNGFVVAAHSKEMEVKYQYDA DGYPLGKTTVSGDQRLSVKSMPSKDLHKRMDYTAVSLLNDKPMGNVKQSCDYDRHNNPVS CELVITDDSVKPAVERKYTIKNSIEYY >gi|333596726|gb|GL892086.1| GENE 342 393660 - 394511 456 283 aa, chain + ## HITS:1 COG:no KEGG:Bmul_0967 NR:ns ## KEGG: Bmul_0967 # Name: not_defined # Def: hypothetical protein # Organism: B.multivorans # Pathway: Metabolic pathways [PATH:bmu01100] # 2 282 6 278 281 183 37.0 7e-45 MIYDCFLYYDEDMLLDIRLHTLADVVDRFVIVEATHSFTGIPRELHFDITKFAKFKDKII YVPFDAQPILSRADNQVDAWANEAALRNSIMNGLKDAADDDLILVSDVDEIFSPDTVRAI NPRALCTTIHQNVFNYQFNLQVHNTDGTPRKCTLPRATSFYNLKHFFHGEPESFRNWKRA RKDKNWSWFKWNWLKINNKIVKDGGWHFSWVMTPERISEKMSTISHTEYDLPEFNNPEHI MKVITNAEDIWGRDRKLVKQEVSKRTLPSYLVDNQHHYSQFIL >gi|333596726|gb|GL892086.1| GENE 343 394614 - 394919 343 101 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1926 NR:ns ## KEGG: Ent638_1926 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 101 1 101 101 168 89.0 8e-41 MKRLPWITALLLMSASPAILAAPDSCERVKSDIQQKIINNGVPESGFTLNIVPNDQADQP DAQVVGHCANDTFKILYTRTSSGNYPVSGAGTQENAPAEPQ >gi|333596726|gb|GL892086.1| GENE 344 395050 - 396033 923 327 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 319 1 315 808 569 85.0 1e-162 MSEVEHHGGISRRALVKSTAIGSLALAAGGITLPFGLKSAAAAVQTAIQPAEDKVVWGAC SVNCGSRCALRLHVRDDEVYWVETDNTGEDIYGNHQVRACLRGRSIRRRINHPDRLNYPM KRVGKRGEGKFERITWEEALDTIAASLKSVVEKYGNEAVYINYSSGIVGGNITRSSPYAS LVARLMNCYGGFLSHYGTYSTAQIACAMPYTYGSNDGNSTSDIENTKLVVMFGNNPAETR MSGGGITYYLEQARERSNARMIVIDPRYTDTAAGREDEWIPIRPGTDAALVAGIAWVLIN ENLVDQPFLDKYCVGYDEKNPAGRRSC >gi|333596726|gb|GL892086.1| GENE 345 395996 - 397489 1756 497 aa, chain + ## HITS:1 COG:ECs2293 KEGG:ns NR:ns ## COG: ECs2293 COG0243 # Protein_GI_number: 15831547 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 3 496 314 807 808 922 85.0 0 MTKKTLPEGAPANGHYKAYILGQGDDKTAKTPEWASRITGIPADRIIKLAREIGSAKPAY ICQGWGPQRQANGEQTSRAIAMLPILTGNVGINGGNSGARESTYTITIERMPLPENPVKT QISCFSWTDAIARGPEMTALRDGVRGKDKLDVPIKFIWNYAGNTIINQHSDINKTHDILQ DESKCETIVVIDNFMTSSAKYADIVLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTAPKF ERKPIYWIMSEVAKRLGPDIHQKFTEGRTQEQWLRYLYAKMVAKDPLLPSYDALKKMGIY KRKDPNGHFVAYKKFRDDPDANPLKTPSGKIEIYSSKLADIAATWELQKDETITPLPVYT STFEGWDAPERSKFPLQLFGFHFKARIHSSYGNVDVLQAACRQEVWLNPVDAEKRGIKNG DMVRVFNDRGEVRIAAKVTPRIMPGVSAMGQGAWHDANMNGDRVDHGSCINTLTTHRPSP LAKGNPQHTNLVQIEKA >gi|333596726|gb|GL892086.1| GENE 346 397500 - 397820 378 106 aa, chain + ## HITS:1 COG:STM0965 KEGG:ns NR:ns ## COG: STM0965 COG0437 # Protein_GI_number: 16764326 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 104 1 104 205 213 98.0 7e-56 MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVNEDVCIGCRYSS >gi|333596726|gb|GL892086.1| GENE 347 398108 - 398884 781 258 aa, chain + ## HITS:1 COG:STM1496 KEGG:ns NR:ns ## COG: STM1496 COG3302 # Protein_GI_number: 16764841 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Salmonella typhimurium LT2 # 2 258 28 285 285 311 70.0 1e-84 MGFVWLKENDDKARMRIVRSLFLLWVVMGIGFMASVLHLGSPLRAFNSLNRVGASALSNE IAAGSIFFAAGGFWWLVSVIGKMPPALGKIWLVVSQILGIVFVWAMTRVYQIETVPTWYT GYTTLSFFLTMVLAGPLLAALLLHVANVTYKASLAASASVLALIVCVAVVVLQSTTLGTI QSSIQQANALLPDYGSLQVWRIALLAAGLGCWICPLIRRQAPKTLGLFAGVVLVVLAELI GRGLFYGLHMTAGLAIAG >gi|333596726|gb|GL892086.1| GENE 348 398929 - 399543 780 204 aa, chain + ## HITS:1 COG:ECs2297 KEGG:ns NR:ns ## COG: ECs2297 COG3381 # Protein_GI_number: 15831551 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 204 4 207 207 268 67.0 6e-72 MNDVSHRESFAFSARVLGALFYFAPDSEQTAPLVSALTAGDWVQDWPLAEESLLPVADMF KTPSDEALKDAWQRLFIGPYALPAPPWGSVWLDRESVLFGESTLALRQWMRENHIAFEMQ QNEPEDHFGTLLMLAAWLAENGRETERDQLLAWHLLPWSTRFLTVFVENAAHPFYKALGK LARLTLADWQSTLLIPIAEKTLYR >gi|333596726|gb|GL892086.1| GENE 349 399653 - 399964 421 103 aa, chain + ## HITS:1 COG:ECs2558 KEGG:ns NR:ns ## COG: ECs2558 COG3141 # Protein_GI_number: 15831812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 78 1 78 96 77 58.0 7e-15 MAVETKFVVVRKGEEKMTFASKKEADAHDKLLDMAEAFTDWLLQSGMQMDETQAENLGLY LAEQKESVQHILRTSKLPEQNAATDKTVSEADGSKKIRAVKAA >gi|333596726|gb|GL892086.1| GENE 350 400077 - 400391 192 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295095963|emb|CBK85053.1| ## NR: gi|295095963|emb|CBK85053.1| hypothetical protein ENC_12190 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 104 1 104 104 162 88.0 8e-39 MEPNFTPEQIEMINRVVFEQIEMMHEKVAEIIAETETAAHQRLKDNGITMTEFCPANQNF LMMSLVQDLIDKVHGGDMALAKTMLTMEAKRLNISVNVEADKSR >gi|333596726|gb|GL892086.1| GENE 351 400430 - 401107 240 225 aa, chain - ## HITS:1 COG:CAP0060 KEGG:ns NR:ns ## COG: CAP0060 COG4845 # Protein_GI_number: 15004764 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Clostridium acetobutylicum # 8 210 5 209 220 135 31.0 9e-32 MTKITPEYTVVDLSRWARKEHFEVFQGFAQSTFNQTVQLDITVLLKHIKEVGWKFYPAII SLISHVVNRHPEFRMAMKDDELVIWNEVHPSYTLFHKETETFSSLWSHYDGNIDRFQHVY AEDVARYGNILAYWPKEESRENIFFISDIPWVSFSSFNVNVANMRNFFAPMFTFGKYYNQ DGKVLLPFAVQVHHSVCDGFHVARLINELQALCDNLPHQSEALDV >gi|333596726|gb|GL892086.1| GENE 352 401194 - 402078 735 294 aa, chain - ## HITS:1 COG:ECs0309 KEGG:ns NR:ns ## COG: ECs0309 COG0583 # Protein_GI_number: 15829563 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 294 7 300 300 519 86.0 1e-147 MAKRENYNELYLFIQVVREGSFTAAAQRLGLAQSGISRSVRELEERLGVRLLVRTTRKLS LTHAGEQLYQTAGSAFDALDTGLTRLAHYRQTPSGTVRINASQHAIEKCLLPKLAIFKQR YPDIRLELMNESRFVDIIAERFDAGVRLGPEVGQGMIAVRITPDMEMAVVAAPAHFRRYG FPQTPADLDAHPCIAYQFADGNHYQWELVQDGKRVTHRPEGQWAFSDSYMEADAARLGLG LAYVPVELVADDLERGALIRVLQRYSLRMDGLYLYYPHRNVSPALRAVIDTLKI >gi|333596726|gb|GL892086.1| GENE 353 402193 - 403320 1122 375 aa, chain + ## HITS:1 COG:ECs0310 KEGG:ns NR:ns ## COG: ECs0310 COG1073 # Protein_GI_number: 15829564 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 374 1 377 378 654 85.0 0 MKTFPQKLSVALLLCASLSGVTTMSYAETRNPDAPVSMVTTWDKTFAESDKVDHRKVTFE NRYGITLVGDLYIPRNSGDQKLAAIAVSGPFGAVKEQSSGLYAQTLAEQGFVTLAFDPSY TGESGGQPRNVASPDINTEDFSAAVDFLGLQKEVDRNRIGILGICGWGGMALNAASMDTR VKAVATSVMYDMSRAMGHGVGDGKDRYSAADRRAVLQYLNAQRWKDAERGAFAHGGHDIH VDETGKVTATGRILPETLPADPHPVLKEFYDYYRMPRGFHARSVNSTGAWTATMPLSFMN MPLLSYAGEITIPTLIVTGENAHSRYFAEDAFNAVGSKQKELVIVPGANHVDLYDNVAGK IPFAQFEHFFKTSLN >gi|333596726|gb|GL892086.1| GENE 354 403379 - 404563 992 394 aa, chain + ## HITS:1 COG:ECs0311 KEGG:ns NR:ns ## COG: ECs0311 COG2814 # Protein_GI_number: 15829565 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 1 391 1 391 397 475 75.0 1e-134 MSTLNQPSSRDAEPAHWGGIFAMTLCVFVLIASEFMPVSLLTPLARDLGVTEGMAGQGIA ISGALAVLTSLFLSRLAGNMNRKHLLSGMTVLMALSGIIIAFAPNALMYMAGRALIGIAI GGFWSMSAATAIRLVPQHQVPRALAIFNGGNALATVVAAPLGSYLGSTIGWRGAFLCLVP VAIVAFIWQYFSLPDMAGNQGQSPRKSVFRLFHQPAVSVGLMACGLFFMGQFALFTYVRP FLETVTHVSPSGLSLILLTIGIAGFIGTLIVARVLNAAFYLTLMAIPLLMAVIAGVLILT GNSLWIVALLSGFWGMLATAAPTGWWTWLARTLPEDAEAGGGLMVAVIQLAIALGSTAGG VVFDTFGWQSTFALSGILLLSAMALTFTASRIPK >gi|333596726|gb|GL892086.1| GENE 355 404710 - 405459 576 249 aa, chain + ## HITS:1 COG:no KEGG:ECL_02212 NR:ns ## KEGG: ECL_02212 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 247 19 265 265 363 84.0 4e-99 MLIKLKKERTHQEDRRLALWLATSAGLLNAIALGAFGFFPSHMTGNTSQLSSEVSSTDLS DILFFGAIILSFVTGAIVARIIVIWGIIHNVRLVFSQVLLVEGLLLVGVSLYEMYFHSSA TNQEIIIFLCGLMGIHNSTSTQLSGGRVRSTHITGTLTDAGISLASVMVAMLRRDYSKDT AAQKSQLTTHLTTLFSFITGGIAGLILFRAFGFHAMLALGLLLVFVAAFSIVRISWRVRK VRAALSRQV >gi|333596726|gb|GL892086.1| GENE 356 405710 - 406420 815 236 aa, chain + ## HITS:1 COG:STM1494 KEGG:ns NR:ns ## COG: STM1494 COG1174 # Protein_GI_number: 16764839 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Salmonella typhimurium LT2 # 1 233 1 234 236 340 88.0 2e-93 MHPLVKRSLLFVGAILVVLALLTWGIGLETIKARQVDLLYLGQQHLILVFSSMFFALLVG IPSGILLSRPAARGIAEYVMQIFNVGNTLPPLAVLALAMVVIGIGDKPAIIALFLASLLP IVRNTYAGLCSVPASLLEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAINVGTAPL AFLIGASSYGELIFPGIYLNDFPTLILGAAATALFALILDTLLAALGRLLSPHLAR >gi|333596726|gb|GL892086.1| GENE 357 406439 - 407338 1258 299 aa, chain + ## HITS:1 COG:STM1493 KEGG:ns NR:ns ## COG: STM1493 COG1732 # Protein_GI_number: 16764838 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Salmonella typhimurium LT2 # 10 299 11 300 300 488 83.0 1e-138 MRLFSGLTALCAAALFSSQALAAPLILATKSFTEQHILSAMTVQYLQKKGFQVQPQTNIA TVISRNAMINKQIDMTWEYTGTSLIIFNHINKRMSPQESYETVKRLDAKHGLVWLKPADM NNTYAFAMQRKRAEAEHINTMSEMVSKIEQIRKTDPDNNWLLGLDLEFAGRSDGMKPLQA AYNMELDRPQIRQMDPGLVYNAVRDGFVDAGLIYTTDGRVKGFDLKVLEDDKGFFPSYAV TPVVRKDTLEANPGLAEALNTLSAQLNNDVITELNKKVDIDHQSPQQVARDFLRSKQLL >gi|333596726|gb|GL892086.1| GENE 358 407347 - 407994 970 215 aa, chain + ## HITS:1 COG:STM1492 KEGG:ns NR:ns ## COG: STM1492 COG1174 # Protein_GI_number: 16764837 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Salmonella typhimurium LT2 # 1 215 1 215 215 288 93.0 5e-78 METIHYILDNWDYLLTLTLQHLWLVALAVGLAIIIGVPLGILIVRHKWLATPVLGIATIV LTIPSIALFGLMIPLFSLIGQGIGALPAITAVFLYSLLPIVRNTHTALDSLPPGLREAGR GIGMTFWQRLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLLNGIGGSD IRMLIAGALMICLLAIVLDWLLHRLQVVLTPKGIR >gi|333596726|gb|GL892086.1| GENE 359 407994 - 409142 1300 382 aa, chain + ## HITS:1 COG:STM1491 KEGG:ns NR:ns ## COG: STM1491 COG1125 # Protein_GI_number: 16764836 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 382 1 382 382 707 91.0 0 MIKLENLTKQFSQKHGQTFKAVDNVNLNVPEGEMCVLLGPSGCGKTTTLKMINRLITPSS GTILINGEDTSGMDTVTLRRNIGYVIQQIGLFPNMTIEENITVVPRMLGWDKARCKSRAE ELMDMVAMDPHKFLHRYPREMSGGQQQRIGVIRALAADPPVLLMDEPFGAVDPINREVIQ NQFLEMQRKLKKTVMLVSHDIDEALKLGDRIAVFRQGRIVQCASPDELLAKPANEFVGSF VGQDRTLKRLLLVSAGDVTDQQPTITVRESTPLPEAFATMDDNDIRAITVVDEHGKPLGF VKRREARNASGSCGDILHPFRMTGKAEDNLRVVLSRLYESNTSWMPIVDEDGRYNGEISQ DYIAEYLSSGRTRRALNIHSES >gi|333596726|gb|GL892086.1| GENE 360 409844 - 411034 237 396 aa, chain - ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 1 265 147 413 512 150 37.0 6e-36 MAFFQTMPASDSATDSDAPQHAQTAKKKKPEDIPGPKRRSALWRWWNGNHEELDYQAAVA VASAAARAQTATAGASLLELISGRVLTYGTWAVRGAVAGPGAPVAGLLVGMMPGRLNDGE QDFIDRMRLEQMNEAPSRVRYTWENDSRGNPVPHGWHTPPGRDSVRVRKMEYDSRQQAYT FTTEEEPRITIVWTPDRTDTKTPWNTGNQARPVLPNPVVVDPLPDNTRITATTSPAPAEK SFADYILILPFPDQPPMYIYLSKPPVEFLEVELYSDFKRRSRQGKYEADHMPSRAAVDAC LRANYPLLDDDEILALTDKVAAIVIPKNMHQKISETYGGRNTPIQIELDSRNLRAAADRN LDAIKPALKEHGATEIQIEAARVKMHKINTETGLYK >gi|333596726|gb|GL892086.1| GENE 361 411788 - 413062 1059 424 aa, chain + ## HITS:1 COG:STM1490 KEGG:ns NR:ns ## COG: STM1490 COG0038 # Protein_GI_number: 16764835 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 1 416 13 428 429 517 80.0 1e-146 MFRRLLIATVTGVLAALAVAVFRHSMYLLEWLFLSNESGSLVNAAAALSPWRRALTPALG GLAAGMLLWGWQRMTAQRPHAPTDYMEALETGDGQFDYGASLVKSLASLLVVASGSAIGR EGAMILLAALAASFFAQRCTPKSEWKLWIACGAAAGMASAYHAPLAGSLFIAEILFGTLM LASLGPVVIAAVVALLTTRLLSPGANTLYAVHLSETLTAADYALIVGVGLLAGVCGPLLM WLMAASHRLFLRLKLSPPWQLALGGLIVGLLSLLTPKVWGNGYSVVQAFLQSPPLLSVIA GVFICKLLAVLASSGSGAPGGVFTPTLFVGMATGMLFAQIVALWFPGSETAILLGLAGMA TLLAATTHAPIMSALMVCEMTGQYFLLPGLLVACVVASVLSRTLRHDSIYGQHTAESREI DVVR >gi|333596726|gb|GL892086.1| GENE 362 412997 - 413692 883 231 aa, chain - ## HITS:1 COG:STM1489 KEGG:ns NR:ns ## COG: STM1489 COG0132 # Protein_GI_number: 16764834 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 398 87.0 1e-111 MLKRFFITGTDTSVGKTVVSRALLQALAASGKRVAGYKPVAKGSKETPEGLRNKDALVLQ SVSSLDLPYDAVNPIALSEEESSVAHSGLINYSLLSDGLANLSEKVDHVVFEGTGGWRSL MNDLRPLSEWVVQEQLPVIMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAH YAEIIDVLSKKLPGPLVGELPYLPRAEQRELAHYIDLSAFGGMLAVDRVVA >gi|333596726|gb|GL892086.1| GENE 363 413826 - 415046 283 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 146 394 63 317 323 113 28 3e-23 MVADSQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV QETEIQEPGSRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEDRLDLPLDA EQPLLDAILTHIDQFFIRHQQRLERLTAIAITLPGIIDTENGIVHRMPFYENVKEMPLGE VLENHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGRLLHAGSS SLVEIGHTQVDPYGKRCYCGNHGCLETIASVESVLELAQVRLSQSMSSTLHGQPLSVDAL CTAARQGDLLAKDIITGVGNNVGRILAIMVNLFNPQKILIGSPLSQAADILFPAISACIN QQALPAYSKNIVVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG >gi|333596726|gb|GL892086.1| GENE 364 415168 - 416073 1003 301 aa, chain - ## HITS:1 COG:ECs2301 KEGG:ns NR:ns ## COG: ECs2301 COG0583 # Protein_GI_number: 15831555 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 295 1 295 297 469 84.0 1e-132 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVSLT AAGKQFLADSRQILSMVQDAAARAERLYLGEAGELRIGFTSSAPFISAVSETLSSFRRHF PDVHIQTREINTREQIAPLNEGSLDLGLMRNTQLPDTLAWQVILREPLMAMIPRDHPLAA QHSVTLAELAKEPFVFFDPQVGTGLYDDILGLMRRYGLVPTIAQEVGEAMTIIGLVAAGL GVSILPASFKRVQLPEMRWVTIAEQDAVSEMWLVWSKHHEQSHAAQRFKEQLITASHGRY L >gi|333596726|gb|GL892086.1| GENE 365 416175 - 417449 1160 424 aa, chain + ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 8 423 1 415 417 657 89.0 0 MYKQGLCVSRTTTIDIAPASDIDDLPAAPQPVQFIKRGTPQFMRVTLALFSAGLATFALL YCVQPILPVLSHEFGVSPASSSISLSISTGMLAIGLLFTGPLSDAIGRKQVMVTALMLAS VCTLLSTMMTSWHGILVMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIG GMSGRLLSGVFTDFFNWRIALAVIGCFALASALMFWKILPESRHFRPTSLRPKTLFINFR LHWRDQGLPRLFLTGFLLMGSFVTLFNYIGYRLMLSPWHLSQALVGLLSVAYLTGTWSSP KAGAMTARFGRGPVMLVSTAVMLFGLLMTLFSSLWLIFAGMLLFSAGFFAAHSVASSWIG PRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHHYGWNGVGGFIALMLCAALLVGASLH NRLK >gi|333596726|gb|GL892086.1| GENE 366 417621 - 418103 352 160 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 160 1 163 163 200 62.0 8e-52 MAIPGNMWLYDDGGALIKGGCDVQQREYSIEFKGFHHNLSTPTDNLTGKPTGKRIHSPMM IVKEFDYSSPYLYKAVATGQALQKAELKFYKINDAGLEAEYFNILLEDVRIVSVSPAMAA PGDNNNNHLETVELRYEKITWKHNDGNIIFSDAWNERATA >gi|333596726|gb|GL892086.1| GENE 367 418054 - 418566 175 170 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0973 NR:ns ## KEGG: Kvar_0973 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 22 170 1 149 149 221 69.0 1e-56 MEISFSLTHGMSGRQRNWGIGMDTTEEINGTYFYRGHSNVTPGELLEIIFLEEFCMELGI DAVSGAAILGGQPWLGTRAKPKGATLGTSVVSKYARIILRDARLPFGIKIPTPVGVRMQS TNKLAAVIGRYIPWLGWASLALTLHRVSTRTQEKYNLIARPKDRIAWTSF >gi|333596726|gb|GL892086.1| GENE 368 418566 - 418895 181 109 aa, chain + ## HITS:1 COG:no KEGG:STM2902 NR:ns ## KEGG: STM2902 # Name: not_defined # Def: cytoplasmic protein # Organism: S.typhimurium # Pathway: not_defined # 2 109 8 115 115 163 75.0 2e-39 MSIVDDVLFMFRDEIPGYLDDHWKEVPLELDSDLFGSPGDDLHDALNRYEKEFNVDLSGV NWSRYFPWQNTPLLQRWFKLKREEVEATRIPLTVRMFAESAKAGKWLYD >gi|333596726|gb|GL892086.1| GENE 369 418996 - 420483 1608 495 aa, chain + ## HITS:1 COG:YPO2310 KEGG:ns NR:ns ## COG: YPO2310 COG2317 # Protein_GI_number: 16122534 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Yersinia pestis # 6 495 4 499 499 697 67.0 0 MQKNVSYQQLTRTFQRLSRFSHLSSIASWDMFTMMPPGGSAARGEALAEMSVLQHQILTD KKVGEWLAAAADEDLNDVEQANLREMTRHYQQATLLPESLVEAKSLAGSKCEHAWRTQRP ANDWLGFSANLKEVVKLSREEARLRAEAKGCTPYDALLDIFEPDMTSARLDGLFGDLKSW LPELLAKVVEKQAQRSFVPPQGPFPTATQRELGLEAMKMLGFDFNGGRLDVSAHPFCGGV PEDVRITTRYDEDELLSALFGVIHETGHARYEQNLPRAWAGQPVALARSTAIHESQSLFF EMQLGRSDAFLKHLLPAVHARFGSQAAFSEENFIGWNQRVKPGYIRVDADEVSYPAHVVL RYEIERALINGEIEVDDIPALWDEKMQAWLGLSTKDNYRNGCMQDIHWTDGGFGYFPSYT LGAMYAAQLFHAAKTALPGLQASIAAGDFSALFDWLRQNIWQHGSRFSTSQLITQATGED LNIRYFREHLTSRYL >gi|333596726|gb|GL892086.1| GENE 370 420633 - 420938 247 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAAAMGLSSAAFAAETTATAAPAASTAAPAKTVHHKKHHKAAKPAAEQKAQA AKKHHKKAAKPAVEQKAQAAKKHHKKAAKHEAAKPAAQPAA >gi|333596726|gb|GL892086.1| GENE 371 421217 - 422038 557 273 aa, chain + ## HITS:1 COG:STM1484 KEGG:ns NR:ns ## COG: STM1484 COG3591 # Protein_GI_number: 16764829 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Salmonella typhimurium LT2 # 1 272 1 272 273 422 78.0 1e-118 MRKSVVLLLGTFSLFAGFSHADDGDDDAISAKEVKTLFFGHDDRTRVTDPTDSPWDAIGQ LETASGNLCTATLITPRLALTAGHCLLMPPEGKPDKAIALRFVSQKGIWRYEIHGIEGRV DPSLGKRLKPDGDGWIVPPGAASWDFGLIVLRYPPSGITPLPLFDGDKAALTAALKAADR KVTQSGYPVDHLDSLYTHTDCVVTGWAQNSVLSHQCDTLPGDSGSPLMLKTDNGWQLIGV QSSAPAAKDRWRADNRALSVTGFRDRLEALAQQ >gi|333596726|gb|GL892086.1| GENE 372 422044 - 422373 540 109 aa, chain - ## HITS:1 COG:STM1483 KEGG:ns NR:ns ## COG: STM1483 COG2076 # Protein_GI_number: 16764828 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 144 82.0 5e-35 MQQFEWIHAAWLAFAIVLEIIANVFLKFSDGFRRKVYGLLSIAAVLGAFSALSQAVKGID LSVAYALWGGFGIAATLAAGWIMFGQRLNNKGWIGLALLHAGMIMIKLA >gi|333596726|gb|GL892086.1| GENE 373 422360 - 422722 372 120 aa, chain - ## HITS:1 COG:STM1482 KEGG:ns NR:ns ## COG: STM1482 COG2076 # Protein_GI_number: 16764827 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Salmonella typhimurium LT2 # 1 120 1 120 120 150 84.0 6e-37 MFYWILLALAIVAEITGTLSMKWASVSDGSTGFILMLVMITLSYIFLSFAVKKIALGVAY ALWEGIGILLITLFSVMLFDETLTTMKIAGLTTLVAGIVLIKSGTRKPAKQQKEQTHAAV >gi|333596726|gb|GL892086.1| GENE 374 423143 - 424183 1341 346 aa, chain + ## HITS:1 COG:STM1481 KEGG:ns NR:ns ## COG: STM1481 COG0628 # Protein_GI_number: 16764826 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 344 1 344 344 443 85.0 1e-124 MAKPIITLNGLKIVIMLGMLVIILTGVRFAADIIVPFILALFIAVILNPLVQRMVRLRIP RVLAISLLISIIIVAMVLLVAYLGTSLNELARTLPTYRSSLATPLLQIEPWLQRAGIEVS VEELLKYVDPNAAMTIVTSLLAQLSNAMTSIFLLFLTVVFMLLEVPQLPAKLQHIMVRPV EGMGAIQRALDSVSRYLVLKTAISLVTGLVVWGMLAALDVRFAFVWGLLAFALNYIPNIG SVLAAIPPILQVLVFSGLYDALILLAGYLVINLVFGNILEPRIMGRGLGLSTLVVFLSLI FWGWLLGPVGMLLSVPLTIIVKIGLEQTAGGQSIAVLLSDMSHKAD >gi|333596726|gb|GL892086.1| GENE 375 424180 - 425160 652 326 aa, chain - ## HITS:1 COG:SMc00968 KEGG:ns NR:ns ## COG: SMc00968 COG0604 # Protein_GI_number: 15964637 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 20 322 7 318 322 119 32.0 5e-27 MSHRKWDGAIAMRNLALWYRRFGEPESVLQAETTPLSPRQPEEIRVRMLFSPVNASDLIP ITGAYRHRTPLPAVAGYEGVGIVTEAPAAYPALLGRRVLPLRGQGTWQRYVDCPVAYAVP VPDDVDSLLAARAYINPLAAQMMLDRYPPVGKTVLLTAAGSDCAVLLGQWARQAGAEAVY GIHRSPVHAQRLAELGIVPIAQHDTAAVNAAAARAEVVYDATGGSLAETILNVMPESGTF VCYGLLSGQTFRQQRALPRVAWFHIRNYLDALSAEAWQAEFRRIWPKLRASQCSEVTLYP LSAWQRALGNYREAGRTGKPMLSMDN >gi|333596726|gb|GL892086.1| GENE 376 425120 - 426154 985 344 aa, chain - ## HITS:1 COG:BMEI0017 KEGG:ns NR:ns ## COG: BMEI0017 COG2141 # Protein_GI_number: 17986301 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Brucella melitensis # 1 340 1 340 340 594 84.0 1e-170 MKKIGFLSFGHWTPSPQSGTQTAADTLLQSIDLAVAAEELGADGAYFRVHHFARQLSSPF PLLAAIGAKTKRIEIGTGVIDMRYENPLYMAEDAGAADLISGGRLQLGISRGSPEQVIDG WRYFGYVPQEGENESDMARRHTEVLLDVLRGEGFAKPNPQPMFPNPPGLLRLEPHSEGLR DRIWWGAGSNATAVWAAKLGMNLQSSTLKDDETGEPFHIQQAKQIRAYRQAWAEAGHTRQ PRVSVSRSIFALMDDRDRMYFGSSRNESDSVGYLDEKTRAIFGRSYAAEPDKLIDQLKKD EAIAEADTLLLTVPNQLGVEYNAHVIESILKHVAPEMGWRDRNA >gi|333596726|gb|GL892086.1| GENE 377 426361 - 426708 373 115 aa, chain + ## HITS:1 COG:no KEGG:ECL_02239 NR:ns ## KEGG: ECL_02239 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 115 1 115 115 239 100.0 3e-62 MALIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN WELLCLFCHDHEHSKYTEADQYGTTVVAGEDAQKDVGVATFNPFADLKAMMNKKK >gi|333596726|gb|GL892086.1| GENE 378 426956 - 428221 571 421 aa, chain + ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 421 1 422 422 748 84.0 0 MFALCDVNAFYASCETVFRPDLKGRPVVVLSNNDGCVISRSAEAKPFVKMGEPYFKQKDR FRHHGVVCFSSNYELYADMSNRVMNTLEAMSPRSEIYSIDEIFCDLTGVRNCRDLADFGH EMRATVLQHTHLTVGVGIAPTKTLAKLANHAAKRWQLQTRGVVDLSNVDRQRKLMAALPV EEVWGVGRRIAKKLEIMGIKTVLQLADTDIRFIRKHFNVVLERTVRELRGEPCLELEEFA PVKQEIVCSRSFGERITEYEDVRQAICSYAARAAEKLRNEHQHCRFISVFVKTSPFALNE PYYGNSASVKLLTPTQDSRDIIGAAVRCLDAVWKKGHRYQKAGVMLGDFYSQGVAQLNLF DDNAPRKNSQKLMDVLDHLNAENGRGTLYFAGQGIQQPWQMKREMLSPRYTTRFADLLTV K >gi|333596726|gb|GL892086.1| GENE 379 428325 - 429344 758 339 aa, chain + ## HITS:1 COG:BMEII0626 KEGG:ns NR:ns ## COG: BMEII0626 COG2355 # Protein_GI_number: 17988971 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Brucella melitensis # 1 337 7 344 346 314 47.0 2e-85 MAIFDGHNDLLLNLWLHHRQDPVTAFFSGIENGHLDYPRMQQGGFSGGLFALFVPPQAYI ARMAPQYASEPWQPVDILWQQLTILKQLVAHSDGRARLCLSAADIERCRQDKVLAMVAHI EGAGGFDGEGEDLQAFYAAGVRSIGPFWNIANRFGTGVNGAFPGSPDSGPGLTAEGIALI KHANALNMLIDVSHMNEKAFWDTARHSSSPLVATHSNAHTLCPQPRNLTDHQLLAIRDSG GVAGVNFGNAFLRADGKRDSDTPLSTIVRHIDYLINIMGDDHVALGSDFDGITLPDDLRD VSGLPRLISALRDSGYDQFVLNKLLWGNWQKVLQNVWQQ >gi|333596726|gb|GL892086.1| GENE 380 429483 - 429554 91 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWKKPAFIDLRLGLEVTLYISNR >gi|333596726|gb|GL892086.1| GENE 381 429610 - 430527 974 305 aa, chain + ## HITS:1 COG:PA1986 KEGG:ns NR:ns ## COG: PA1986 COG1235 # Protein_GI_number: 15597182 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Pseudomonas aeruginosa # 1 303 1 304 304 395 61.0 1e-110 MFIKVLGSAAGGGFPQWNCNCANCQGLRNGTLQATPRTQSSIIVSDNGKEWVLCNASPDI SQQIAHTPELNKKEVLRGTHIGGIILTDSQIDHTTGLLSLREGCPHQVWCTPEVHEDLST GFPIFTMLRHWNGGLIHHPIVPLTAFSVEACPDLQFTAVPIASNAPPYSPWRDRPLPGHN VALFIENRRNGQTLFYAPGLGEPDDAILPWLKKADCLLIDGTVWQDDELQAAGVGRNTGR DMGHLALGDEHGMMALLASLPAKRKILIHINNTNPILNEQSPQRHALAQQGIEVSWDGMN ITLQD >gi|333596726|gb|GL892086.1| GENE 382 430530 - 431285 840 251 aa, chain + ## HITS:1 COG:PA1987 KEGG:ns NR:ns ## COG: PA1987 COG5424 # Protein_GI_number: 15597183 # Func_class: H Coenzyme transport and metabolism # Function: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C # Organism: Pseudomonas aeruginosa # 4 246 3 245 250 360 73.0 2e-99 MHIRETLSPQEFEHALRAKGAYYHIHHPYHIAMHNGEASREQIQGWVANRFYYQTTIPLK DAAIMANCPDPHTRRKWVQRILDHDGSNGHDGGIEAWLQLGEAVGLSRDDLISERHVLPG VRFAVDAYVNFARRANWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIKEEGYFYFRSRL SQASRDVEHGLELAKRYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVT DKAAWHTTRLV >gi|333596726|gb|GL892086.1| GENE 383 431288 - 431566 355 92 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2488 NR:ns ## KEGG: Kvar_2488 # Name: not_defined # Def: coenzyme PQQ synthesis D # Organism: K.variicola # Pathway: not_defined # 1 92 1 92 92 161 91.0 1e-38 MQKNSIVAFRRGYRLQWEAAQDSHVILYPEGMAKLNETAAAILELVDGQRDAAAIIALLN ERFPEAGGVDDDVVEFLQIAYQQKWIIFREPE >gi|333596726|gb|GL892086.1| GENE 384 431496 - 432695 1086 399 aa, chain + ## HITS:1 COG:PA1989 KEGG:ns NR:ns ## COG: PA1989 COG0535 # Protein_GI_number: 15597185 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Pseudomonas aeruginosa # 19 395 4 380 381 571 70.0 1e-163 MTTSLNSCKSLINRSGLFSVSQNKPAVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDQE LTTEQWIEVFRQARAMGSVQIGFSGGEPLTRKDLPELIRAARDLGFYTNLITSGIGLTES KLDAFSEAGLDHIQISFQASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLNFVLHR HNIDQIDKIIELCIELDADDVELATCQFYGWAFLNRQGLLPTREQIARAEGVVAEYRQKM AASGNLTNLLFVTPDYYEERPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVDFPSVLEQ SLESIWYDSFGFNRYRGFDWMPEPCRSCDEKEKDFGGCRCQAFMLTGNADNADPVCSKSP HHHKIQEARREAACSDMKIGQLQFRNRTRSQLIYKTREL >gi|333596726|gb|GL892086.1| GENE 385 432701 - 434977 1442 758 aa, chain + ## HITS:1 COG:PA1973 KEGG:ns NR:ns ## COG: PA1973 COG1025 # Protein_GI_number: 15597169 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Pseudomonas aeruginosa # 8 681 16 688 775 231 34.0 6e-60 MTTRIVELAGGLRATLVHQPQATRAAALARVSAGSHHEPPRFAGLAHLLEHLLFRGSQRY QGDDRLMAWVQRQGGSVNATTLARHSAFFFDVAADNLSDGVARLRDMLQAPLLSRHDIQR EVAVIDAENRLIQQHDATRREAAARHAMEEPAVFRRFQVGSKDSLGQDTLSLQTALRDFH RRYYVAGHLQLWLQGPQTLDALAELARTFASGFASDGMPETAPPLRLSAEAEYQLAVTER PALWRCPLIRKSDNVTLLQEFLLDDAPGSLIAELRTRGLAEEVALNWLYQDDEYGWLALT VDGERPEDIDPHITHWLQALQQTTDEQQRHYHRLAQRRFSALPTLEQLRQRAFGFAPGAA PAGFSAFCADLLAAPVSYLACKKMETAEIIASQGFSLPLSPWRRQPVADDSPIAFSFYPQ TARYAAPAPTSEAAPLLHLSAQTQPPTLILRRPFYSRVERAQGVAMGKQLRPLLAELRHI DGSGEWQAVDGSWQLTLRLPDAMVTAERIIGAIIERLAHLAPAITPAPEGIAIRELLQQL PERLASDPPRDGWLAALAGGSAGHAHRLARQLSLLGAPVNATPTPLNGCPGGIEHIPHAS ADSALLVFIPLPPGASLAALRLLALCCEPQFFQRLRVEQQIGYVVSCRYQRIADRDGLLL ALQSPDRSPLNLLGCCKRFLRELTLCDEATFSVLRQQLATQIPSPMDASATAVAALRQRY GLPVLTPQAIDALQPDEIIALWREMTRRRRRWRVLFTG >gi|333596726|gb|GL892086.1| GENE 386 435062 - 437491 2454 809 aa, chain - ## HITS:1 COG:AGl2936 KEGG:ns NR:ns ## COG: AGl2936 COG4993 # Protein_GI_number: 15891579 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 807 14 807 809 1118 69.0 0 MSDNNPRPSGWVGLWCLLVGVILLVTGLFFAIGGFKLVSLGGSWYFLIAGVITLLSAIQF FRRKSSAVGLFALVFLGTLIWAFFDAGLDFWPLVSRLMVPAGLMVLAAATWPALRKREGK PSSTKGAMGVCAVLIVAMGVTFVQMFQPHPTVPFSGEKRPLVPVKDEAKQQNWDHYGNTA GGSRFVALDQITRDNVKNLKPVWTFHTGDVPESPDGNGAEDQQTPLQVGDRVFLCTPHNN VIAVDADSGKAIWKAEINAKSAIWMRCRGLAYFDATKPLAQPTVAGSTPVLPAQVAPGAA CQRRILMNTIDGKLIALDADNGKFCPDFGTHGSVDLHEGMGDASDPTYVLTSAPTLAGTT VVVGGRVADNVSTDMPGGVIRGYDVITGQLRWAFDPRNPDPNYVLKPGEHYKRSSANSWA PMSWDASMNTVFIPMGSSSVDLWGADRIPEDHKYATSILALDATTGKEKWVYQTVHNDLW DFDIPMQPSLVDFPTKEGNKPAVVVGTKAGQIYVLDRLTGKPLTEVKEVPVKPADIPREQ YPATQPRSVGMPQIGAETLKESDMWGATPFDQLACRISFKSMRYDGLYTMPGTDISLSFP GSLGGMNWGSLSTDPNNQYIFVNDMRLGLWVQLIKQDPQSAVANTGGEAVNAGMGAVPMK GTPYSVNKNRFMSPLGIPCQKPPFGSLSAIDLKTQKIVWQVPVGTVQDTGPFGVKMRMPM PVGMPTLGGTLATQGGLVFIAGTQDYYLRAFDSSTGEEVWKARLPVGSQGGPISYVSPKT GKQYILISAGGARQSPDRGDYVIAYALDK >gi|333596726|gb|GL892086.1| GENE 387 437655 - 438074 421 139 aa, chain - ## HITS:1 COG:STM1998 KEGG:ns NR:ns ## COG: STM1998 COG1974 # Protein_GI_number: 16765334 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 217 77.0 6e-57 MIFFKPAELREIVAIPLFSDLVQCGFPSPAADYVERRIDLNELLVAHPSSTYFVKAAGDS MIEGGINNGDLLVVDSSRKPEHGDIVIAAVEGEFTVKRLQLRPNIQLNPMNSAYSPIIVG SDDTLDIFGVVTYIVKSAS >gi|333596726|gb|GL892086.1| GENE 388 438400 - 438600 127 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295095986|emb|CBK85076.1| ## NR: gi|295095986|emb|CBK85076.1| hypothetical protein ENC_12560 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 66 1 66 66 94 95.0 2e-18 MPARDYPDKRVARGVAKEAELRMLSARIDPALMEYIRITAYETRKSKQEIVAEALALHRQ RSQMGS >gi|333596726|gb|GL892086.1| GENE 389 438647 - 439513 950 288 aa, chain - ## HITS:1 COG:ydbC KEGG:ns NR:ns ## COG: ydbC COG0667 # Protein_GI_number: 16129367 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 7 287 3 284 286 420 75.0 1e-117 MSSIDKSGTFTLGTRTVKRFGYGAMQLAGPGVFGPLKDKNAALAVLREAVASGVNHIDTS DFYGPHVTNQLICEALHPYRDDLTIVTKIGARRGEDASWLPAFSAQELTQAVHDNLRNLK RDVLDVVNLRIMFSAHGPAEGSIAAPLSTLAELQQQGLVRHIGLSNVTASQVAEAQKMVS VVCVQNMYNVVNRGDDALVDSLAQQGIAWVPFFPLGGFTPLQSSGLQAVADSLGATPMQV ALAWLLQRSPNILLIPGTSSVAHLRENLAAADLVLPPEALETLNSLAD >gi|333596726|gb|GL892086.1| GENE 390 439659 - 441320 1892 553 aa, chain + ## HITS:1 COG:STM3577 KEGG:ns NR:ns ## COG: STM3577 COG0840 # Protein_GI_number: 16766863 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 2 553 1 547 547 573 67.0 1e-163 MLKNLHVITGIIFALTIFCLLQVVTGGLFYSAVNNDRQNFQNSGVLNAQQESLSDSVNTL VKTRVTVTRVAIRYLKNQRDPASLAAINTLLGTANASLTKAEDYYKNWQAIPQVKGQNSA LTEEMQKAWKKMHEVMRLSIEYLRADNYQAYGDLDAQQAQDEMEAVYTRWRAENNVLLKA AAEENQSSFTQMQWTLAAIFLTVIAVLVVIWQGLQHLLLKPLNAIMNHIRTIASGDLTQN VAMSGRNEMGQLAAGLHEMQQSLVSTVSAVRGSTDSIYTGAGEIAAGSNDLSARTEQQAA SLEETAASMEELTATVKQNSDNARQATLLAKNASETAARGGQVVDNVVRTMNDIADSSQQ IAHITGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKGL IENSVSRVNTGSEQVSEAGATMKEIVAAVTRVTDIMGEIASASDEQSRGIEQVSLAVSQM DSVTQQNAALVQESATAAAALEDQSEQLRQAVAAFRLNTQGSPVARPENVKTPVLLRPSV AGANASDANWETF >gi|333596726|gb|GL892086.1| GENE 391 441357 - 441920 526 187 aa, chain - ## HITS:1 COG:ydaL KEGG:ns NR:ns ## COG: ydaL COG2840 # Protein_GI_number: 16129301 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 187 1 187 187 283 72.0 9e-77 MNPDDKSLFLDAMEDVQPLKRCTDIHWQQSRNTRARQEIDTEQLDNFLTLGFLELLPLDE PLMFQREGVQQGVFDKLRSGKYSRQASLTLLRQPAEQCRQLVYSFIRQAGRDGLRNLIIV HGKGREQQSHPNVVRSYLARWLTEFDEVQAFCEAQPYHGGSGACYVSLRKSDDAKRDNWE RHAKRSR >gi|333596726|gb|GL892086.1| GENE 392 442272 - 443177 421 301 aa, chain - ## HITS:1 COG:ECs1923 KEGG:ns NR:ns ## COG: ECs1923 COG0583 # Protein_GI_number: 15831177 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 296 1 296 302 481 80.0 1e-136 MSFQIKFHQIRAFVEVARQGSIRGASRTLNLSQPALTKSIKELEEGMAAQLFVRRSKGVA LTECGEGFYHRANLILEELRAAQDDIRQRQGELAGQINIGMGASISRSLMPAVITRFHAQ HPQVNVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLFEKPFAVFCRAGHP ATGATSIHELLQYNWTMPTPRGSYYKQLQDTFNHRSLIPRIGVVCETFSSCISLVAQSDF ISILPQELGCDPLLAHRLIMLPVVESLPKAAYYLIQRRDSRQTPLAESLITQFRREARKL I >gi|333596726|gb|GL892086.1| GENE 393 443353 - 444663 1438 436 aa, chain + ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 436 6 441 441 615 76.0 1e-176 MSSLAQYIQTLVPQLSAWRRDFHHFAESGWVEFRTAAKVAEILDHLGYELAMGRDVVDAE SRMGLPDHAALESAFSRAREQGAPEKWLAPFEGGFTGIVATLNTGRPGPTLAFRVDMDAL DLSEAHDDSHRPYRDGFASCNPGMMHACGHDGHTTIGLGLAQVLKQHEAQLNGTIKLIFQ PAEEGTRGARAMVAAGALDGVDYFTAIHIGTGVPKGTVICGSDNFMATTKFDVRFTGVAA HAGGKPEAGRNALLAAAQAAIALHGIAPHSEGASRVNVGVMQAGSGRNVVPADALLKVET RGESEAINHYVFDRAQAVITGAAALYGVTAGIKLMGAATSSAPSPAWVDYLREQASQVPG VTHAIDKVKAPAGSEDATLMMARVQQNGGMASYMVFGTELSAGHHNEKFDFDEQVMNVAI ETLARTALNFPWTRGV >gi|333596726|gb|GL892086.1| GENE 394 444663 - 446108 1427 481 aa, chain + ## HITS:1 COG:abgB KEGG:ns NR:ns ## COG: abgB COG1473 # Protein_GI_number: 16129298 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli K12 # 1 481 1 481 481 773 79.0 0 MQENYAFIADAIDTRCQTFTDIADDIWDHPETRFEEFWSAERLASALEAEGFTLTREAGG IPNAFIASYGSGKPVIALLGEYDALAGLSQQAHCATAQSATPGANGHGCGHNLLGTAAFA GAVAVKSWLEQHGGSGTVRFYGCPGEEGGSGKTFMVREGLFDDVDAAVTWHPEAFAGMFN VSTLANIQAAWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITD TGGISPNVVQAQAEVLYLIRAPEMADAQQIYARIEKIAQGAAMMTETTVECRFDKACSSY LPNRTLEAAMYRALQHYGTPVWTEEERAFAREIRATLTPDDLQNSLKNIAATGGEEGKAF ARRHQETLLVDEVAPYAITDNVLAGSTDVGDVSWKMPVAQCFSPCFTVGTPLHTWQLVAQ GRTSIAHKGMLLAGKVMGATALHLLQDADLLRKCREEFEQHITEKPYACPIPQGVTPSLL K >gi|333596726|gb|GL892086.1| GENE 395 446153 - 447679 1776 508 aa, chain + ## HITS:1 COG:abgT KEGG:ns NR:ns ## COG: abgT COG2978 # Protein_GI_number: 16129297 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Escherichia coli K12 # 13 508 15 510 510 779 87.0 0 MSMSSIPSHSPSGKLYGWVERIGNKVPHPFLLFIYLIVILMVATAVLSAFEVSVRSPADG SMVAVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASH VSARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLSAIAGVGCGFTA NLLIVTTDVLLSGISTEAARTIDAAMHVSVIDNWYFMASSVIVLTIVGGLITDKIIEPRL GKWEGRSDEKLETLSKEQQFGLRVAGIVSLAFIAVVALMVVPENGVLRDPIKHTVLPSPF IQGIVPLIILFFFVVSLAYGIATGKIRRQGDLPHLMIEPMKEMAGFIVMVFPLAQFVAMF NWSNMGKFMAVSLTDALEAAGLSGVPAFVGLALLSSLLCMFIASGSAIWSILAPIFVPMF MMLGFHPAFAQVLFRVADSSVIPLAPVSPFVPLFLGFLQRYRPEAKLGTYYSLVLPYPLI FLGVWLVMLVAWYLVGLPIGPGVYPRLN >gi|333596726|gb|GL892086.1| GENE 396 447689 - 448204 686 171 aa, chain + ## HITS:1 COG:ogt KEGG:ns NR:ns ## COG: ogt COG0350 # Protein_GI_number: 16129296 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli K12 # 1 171 1 171 171 305 85.0 2e-83 MLRLLEDKIATPLGPLWVITDEAFNLRAVEWEEHSDRMVELLNIHYRAEGYERITARNPG GLSDKLTAYFEGDLGIINTLPTATAGTPFQREVWQALRNIPCGQVMHYGQLAEQLGRAGA ARAVGAANGSNPVSIVVPCHRVIGRNGTLTGYAGGVQRKEWLLRHEGYFLL >gi|333596726|gb|GL892086.1| GENE 397 448388 - 449140 966 250 aa, chain + ## HITS:1 COG:STM1660 KEGG:ns NR:ns ## COG: STM1660 COG0664 # Protein_GI_number: 16765004 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Salmonella typhimurium LT2 # 1 250 15 264 264 493 98.0 1e-139 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAERGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENGEALA ILAGHSRNVA >gi|333596726|gb|GL892086.1| GENE 398 449277 - 450227 1020 316 aa, chain + ## HITS:1 COG:ECs1914 KEGG:ns NR:ns ## COG: ECs1914 COG0589 # Protein_GI_number: 15831168 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 607 93.0 1e-173 MAKYQNMLVAIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAM RQGVISQRTAWIREQAKYYLEAGVPIDIKVVWHNRPFEAIIQEVVAGGHDLLLKMAHQHD KLESVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKAVVAVNLASEEDYHNSLNEKLVKET IQLADQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFSIDE NMTHVEKGLPEEVIPDLAEHLQAGIVVLGTIGRTGISAAFLGNTAEQVIDHLRCDLLVIK PDQYQTPVELDDEEDD >gi|333596726|gb|GL892086.1| GENE 399 450267 - 451379 1168 370 aa, chain - ## HITS:1 COG:STM1260 KEGG:ns NR:ns ## COG: STM1260 COG0668 # Protein_GI_number: 16764612 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Salmonella typhimurium LT2 # 1 353 1 353 377 498 71.0 1e-141 MRFLSRFDIIELMMTPSFWIGVATVVFVTLLVYWLLTRLIAFVKKGITTWGDKHPTTNRM RFILTDMLNRTSRFLLFVVALLFSLRFVDLPDHLFGTVSHAWFLVFAIQVALWMDQGVVS WLRHVMLAPGSHKNPVTLVITGLILRAIVWSVMLLSILANAGVNITALVASLGVGGIAIA LAVQTILSDVFASLSIGFDKPFEIGDFVVFNDVAGTVEHIGLKTTRIRSLSGEQIVCGNA ILLQQTLHNYKRMQTRRIVFTFGVASDTAPDKLRSVGEMVKQIITDVGETKFDRAHFLGF DRDRLTFEVVHIVNTADYNKYMDIQQEINIRILEGLNQQEIKLALPSMVLHAPWMNADDE ASAQRLSEAQ >gi|333596726|gb|GL892086.1| GENE 400 451487 - 452875 1950 462 aa, chain - ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 810 93.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSQQGNNFGIAGMAIALIATIFGPDTGNVAWI LVAMIIGGAIGIRLAKRVEMTEMPELVAILHSFVGLAAVLVGFNSYLYHEPGLEPILVNI HLTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPLMLPNRHKLNLAALVVSFVLLVVFVR TESVGLQVLALLVMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGSDGSSTGSDEEVGEHREISAEDTA EMLKNAHSVIITPGYGMAVAQAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLA EAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPRSPIAGMPVLEVWKAQNV IVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL >gi|333596726|gb|GL892086.1| GENE 401 452886 - 454415 1535 509 aa, chain - ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 508 1 509 510 875 89.0 0 MRIGVPKERLANETRVAATPKTVEQLLKLGFTVAIESGAGKLASFDDEAFIQAGADVVDG AEVWQSPIILKVNAPEESEIELLNAGTTLVSFVWPAQNPELMEKLAARGVTVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSEAFIKAEMA LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMQPGSVIVDLAAQNGGNCEYTVPNQV TTTANGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVVRGVTV VREGEITWPAPPIQVSAQPQAAPKAAPEPVEPAKPASPWRKYAIMALVIILFGWLADVAP KEFLGHFTVFALSCVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWISFL SFIAVLIASINIFGGFTVTQRMLKMFRKG >gi|333596726|gb|GL892086.1| GENE 402 454951 - 455895 1029 314 aa, chain + ## HITS:1 COG:no KEGG:ECL_02265 NR:ns ## KEGG: ECL_02265 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 314 1 314 314 506 93.0 1e-142 MKLKNTLLASALLSATALSANAATELTPEQAAALKPFDHTVIVGRYNSIGDAVAAASKAA DKNGAASFYVVDQSDQGNSGNQRVTIALYKENAPKADEQKNRVINGIVELPKDQAVQLEP YDTVTVQGFYRSQPEVNDAITKAAREKGAYAFYIVRQVDANQGGNQRITAFIYKQDAKKR VVQSPDAIPADSDAGRAALAKGGEEAKKVEIPGVATSAAPSAEVGRFFETQSTKGGRYTV TLPDGTKIEELNKATAAQMVPFDSIKFTGNYGNMTEISYQVAKRAAKKGAKYYHITRQWQ ERGNNLTISADLYK >gi|333596726|gb|GL892086.1| GENE 403 456081 - 457463 1645 460 aa, chain + ## HITS:1 COG:ECs2311 KEGG:ns NR:ns ## COG: ECs2311 COG0531 # Protein_GI_number: 15831565 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 724 90.0 0 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGVGILLLAFAMLLL TRIRPDLDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR LFGDGNTWQSIVGASVLLWIVHWLILRGVQTAASINLVATLAKLVPLGLFVVLAFLAFRL DVFTLDFSGIALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGRATLLAVLA ALGVYLLVTLLSLGVVARPELAEMRNPSMAGLMVKMLGPWGDVIIAAGLIVSVCGAYLSW TIMAAEVPFLAATHKAFPRLFARQNKNSAPSASLWLTNISVQVCLVLIWLTGSDYNTLLT IASEMILVPYFLVGAYLLKIATRPAHYAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGL LVFIYARRTHQLDNALKRREMALIGLLLVAAVPATWMLMG >gi|333596726|gb|GL892086.1| GENE 404 457503 - 458225 577 240 aa, chain + ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 398 80.0 1e-111 MGHTQQRPILITGAGRRIGLALAHHFLNLRHPVIVSYRTEYPSIEGLRNAGAVCIQADFS TDEGILAFADKVKSTTHGLRAVIHNASTWLPEKAGHSLSETLACMMQIHVNAPYLLNHAL QDLLRGHGHAAGDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNAIA PAMILFNEGDDAEYRQQALNKSLMKIAPGEKEVIDLIDYLLTSCYVTGRTFAVDGGRPLR >gi|333596726|gb|GL892086.1| GENE 405 458222 - 458557 436 111 aa, chain - ## HITS:1 COG:STM1476 KEGG:ns NR:ns ## COG: STM1476 COG3136 # Protein_GI_number: 16764821 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Salmonella typhimurium LT2 # 1 111 1 111 111 143 81.0 7e-35 MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIV FGMWSIIPYFIYLLSLWYFTGFLRLPLALGGAVVCWCLSAWVLIFFWSRVH >gi|333596726|gb|GL892086.1| GENE 406 458685 - 459401 704 238 aa, chain + ## HITS:1 COG:rstA KEGG:ns NR:ns ## COG: rstA COG0745 # Protein_GI_number: 16129566 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 237 4 242 242 360 81.0 1e-100 MNKIVYVEDEPEVGQLIAAYLGKHDMEVVVEPRGDRAEDVVTRENPDLVLLDIMLPGKDG MTLCRDLRAKWDGPIVLLTSLDSDMNHILSLEMGANDYILKTTPPAVLLARLRLHLRQRA SADREAPVPSLTPHKAMRFGTLSIDPVNRQVMLSGELIALSTADFDLLWELATHAGQIMD RDALLKNLRGVSYDGMDRSVDVAISRLRKKLLDSATEPYRIKTVRNKGYLFAPHAWET >gi|333596726|gb|GL892086.1| GENE 407 460597 - 460815 198 72 aa, chain + ## HITS:1 COG:cspB KEGG:ns NR:ns ## COG: cspB COG1278 # Protein_GI_number: 16129516 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli K12 # 1 71 1 71 71 106 74.0 9e-24 MSSKILGLVKWYKEDKGFGFISPVDGSKDVFVHFSALQGENFKTLFEGQKVEFIIVSGDK GPAAANVTLCDK >gi|333596726|gb|GL892086.1| GENE 408 461248 - 461475 111 75 aa, chain + ## HITS:1 COG:no KEGG:KPK_4952 NR:ns ## KEGG: KPK_4952 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 75 1 75 75 106 66.0 4e-22 MKKVIVFFNANPSKVIIVLKGITSVRQTYPNGEEINLQIMTASFPSLTGDHDSLYVASDR ELTSQDISDVAKQYL >gi|333596726|gb|GL892086.1| GENE 409 461632 - 462729 698 365 aa, chain - ## HITS:1 COG:no KEGG:ROD_06201 NR:ns ## KEGG: ROD_06201 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 365 1 365 365 632 89.0 1e-180 MLYVDIPGREEFSHLYDIRSDACVSIYLGTSPIRHNLDASKIQLGNFIKEALQQVEEKGV DKRRLAMLEEELCSVLEDVEFWDCHARSLAILATPESITTYRLANNLSDQLEVSERFYLK PLLRALTFPHSAYILALSVNEARLIEFFPDVPPEEVDVPNMPTCRRDAMTEAALNDHHHG AVHHKVRLAQYTRKIDQALRPLFASHDHPLFLVAAEPLASIYRATNSLSNLTDETLFTNA EHIGLTDLVSQVRPLLDYYYQVQLDSLKTRFEIRAGQRRVTQEISDAARAATFGAIELLL VNIESALKGTIDEDGLLSLDDRENSYVIIDEIAKRAMATGARVLAVRGEDLPSGAELYAT LRYPL >gi|333596726|gb|GL892086.1| GENE 410 462890 - 463324 90 144 aa, chain - ## HITS:1 COG:STM1652 KEGG:ns NR:ns ## COG: STM1652 COG0589 # Protein_GI_number: 16764996 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 1 144 1 144 144 149 50.0 2e-36 MTRRLLVPIDVTEGELAHTIITHTQNESRFDTAEIHFLSVVQPFPYYPALGGRHSIHIPS IDELVDDARKTLEKTVRNFEIPGVKTFIHVTAGSPKDKILEMADKLSADLIIISSRRDKL TKFLLGSTTASVVRHAECSVLVVR >gi|333596726|gb|GL892086.1| GENE 411 463953 - 465251 1495 432 aa, chain + ## HITS:1 COG:ZrstB KEGG:ns NR:ns ## COG: ZrstB COG0642 # Protein_GI_number: 15802023 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 427 1 428 433 706 79.0 0 MKKLFVQFYLLLFVCFLVMTMLVGLVYKFTAERAGRQSLDDLMKSSLYLMRSELREIPPH DWARTLKELDLNLSFDLRIEPMKDFDLAPPAMQRLRDGDIVALDEKYTFIQRIPRSHYVL AVGPVPYLYYLHQMRLLDLALLGFIAISLAFPVFIWMRPHWQDMLKLESAAQRFGEGHLT ERIHFDSGSSFDRLGIAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSENL TSAESQALNRDIGQLEALIEELLTYARLDRPQTELHLSTPDLPVWLQTHIDDVQSVNPQR KLLTAITPGAYGGLDMRLMERVLDNLMNNAMRYSESTLRIGLDLQGSQAILCVEDDGPGI EPAEREKVFEPFVRLDPSRDRATGGCGLGLAIVRSIAQAMGGSVRCEASELGGARFVFSW PIYHNLPLPVPA >gi|333596726|gb|GL892086.1| GENE 412 465326 - 466255 971 309 aa, chain + ## HITS:1 COG:no KEGG:ECL_02272 NR:ns ## KEGG: ECL_02272 # Name: not_defined # Def: DNA replication terminus site-binding protein # Organism: E.cloacae # Pathway: not_defined # 1 308 1 308 309 532 89.0 1e-150 MATYDLIERLNTTFREIEQALLTLTGQLQDCRLLAARVFSLPDVAKGAEHDPLNTIEVTQ HIGKAALGLTLQHYRRLFIQQQSENRSSKAAVRLPGVICLQTDTATREAIEAKITHINTL KAAFEKIVTVESGLAPAARFEWVHRQLPGLITLNAYRSLTVLRHPATLRFGWANKHIIKN FTRDEILAQLEKSLKSPRTVAPWSREQWIERLEQEYHSIASLPADTRLKIKRPVKVQPIA RVWYAGQQKQVQYACPTPLIALYDADQGEVVPDIGELLNYDAENVQHRYKPQAQPLQLII PRLHLYVAP >gi|333596726|gb|GL892086.1| GENE 413 466256 - 467650 1898 464 aa, chain - ## HITS:1 COG:STM1469 KEGG:ns NR:ns ## COG: STM1469 COG0114 # Protein_GI_number: 16764815 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Salmonella typhimurium LT2 # 1 463 1 463 467 823 89.0 0 MTMHRREKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPVSLIQALALTKRAAAKVNQ DLGLLDADKATAIINAADEVLAGKHPDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGG VRGMERKIHPNDDVNKSQSSNDVFPTAMHVAAVIAIREQLIPQLNVLKSTLNEKAQSFRD IVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIDNSLPHLAELALGGTAVGTGLNTHP EYAVRVAEELAKITGQPFVTAPNKFEALATCDALVHTHGALKGLAASLMKIANDVRWLAS GPRCGIGEISIPENEPGSSIMPGKVNPTQCEAMTMLCCQVMGNDVAVNMGGASGNFELNV YRPMVIHNVLQSIRLLADGMESFNEHCAVGIEPNRERISQLLNESLMLVTALNTHIGYDK AAEIAKKAHKEGLTLKASALALGYLTDAEFDAWVRPEAMVGSLR >gi|333596726|gb|GL892086.1| GENE 414 467833 - 469479 475 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 187 32 2e-45 MSNKPFHYQDPFPLSKDQTEYYLLTRDYVSVSEFEGQEILKVDPQALTLLAQQAFHDASF MLRPAHQQQVADILNDPEASENDKYVALQFLRNSDIAAKGILPTCQDTGTAIITGKKGQR VWTGGGDEAALARGVYNTYTEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYSVDGDEYKF LCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAES TLKTVKLASTKYYDGLPTEGNEHGQAFRDVQLEQELLAEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINRDGIWIEKLENNPGKYIPEELRKAGEGEAVR VDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERLDNGEGLPQYIKDHPIY YAGPAKTPDGYASGSLGPTTAGRMDSYVDQLQANGGSMIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFKQIQS SQCSACVK >gi|333596726|gb|GL892086.1| GENE 415 469679 - 470854 1455 391 aa, chain + ## HITS:1 COG:ECs2319 KEGG:ns NR:ns ## COG: ECs2319 COG1482 # Protein_GI_number: 15831573 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 647 84.0 0 MQKLINSVQNYAWGSQTALTDLYGIANPDNLPMAELWMGAHPKSSSKIEDASGQVRSLRD VIDADKAALLGDKVANRFGELPFLFKVLCADQPLSIQVHPNKQASEIGFAKENAAGIPLD AAERNYKDPNHKPELVFALTPFLAMNAFREFSDIISLLQPVAGAHNAIAHFLENPTAEAL SELFASLLNMQGEEKSHALAVLKAALSSQKGEPWDTIRVIAEFYPDDSGLFSPLLLNVVK LNPGEAMFLFAETPHAYLNGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFVAKPAAE LLTQPVKNGAELDFPIPVDDFAFSLHDLSADETAIAQESAAILFCVEGEATLHKGSERLV LKPGESAFVAANESPVSVSGTGRLARVFNKL >gi|333596726|gb|GL892086.1| GENE 416 470954 - 472480 1855 508 aa, chain + ## HITS:1 COG:STM1466 KEGG:ns NR:ns ## COG: STM1466 COG5339 # Protein_GI_number: 16764812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 508 1 502 502 710 70.0 0 MKKSVVAVGVIVALGVIWTGASWYTGKQLESRLAEMMAQANSEIKRSAPEAGLELSYQNY QRGVFTSHMQVVVKPVAGNQNAWLKPGQSVVLDEVVSHGPFPLAQLKKFNLIPSMASART VLVNNEVTKPLFDMAKNTSPFEINTRISYAGDTHSDIDLKALNYEQGTDKVAFSGGNFQL DADRDGKTVSLTGDAASGLVNSVNEYNQKVQLTFNNLKASGNSRMTDFDERIGDQKLSLD KIAIAIEGKEMAVLEGMDLDGKSDVSKDGKSINTQLDYSLKSLKVQNQDLGTGKLSLKIG NIDGQAWHEFSQKYSKESQALLTDAALQQNPQAYQQQAMAVLFNNLPILLKGEPVITVAP LSWKNDKGETNFNLSLFLKDPSAATGEPQTLAQEVDRSVKSLDSKLTIPMDMATEFMTQI AKLEGYGEDDAGKLANQQVKGLAAMGQMFRITKVEDNTISTSLQYANGQVTLNGDKMALE DFVGMFGMPTLGMPEPAEPAAPPAVPQQ >gi|333596726|gb|GL892086.1| GENE 417 472562 - 473590 813 342 aa, chain - ## HITS:1 COG:malI KEGG:ns NR:ns ## COG: malI COG1609 # Protein_GI_number: 16129578 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 342 1 342 342 494 72.0 1e-140 MAVAKKITINDVALAAGVSVSTVSLVLSGKGRISPATGQRVNEAVEQLGFVRNRQASALR GGQSGVIGLIVRDLTSPFYAELTAGLTEALEAQGRMVFLLHGGREPEQLLSRLDMLLTQG VDGVIVAGASGVGSELCERAAQKGVPLVFASRASYLDEADTLRPDNMQAAQMLTEHLIHR GHQRIAWLGGKSSSLTRAERVGGYCSTLIKYGLPFHSEWVVECESSQKKAAEAIGKLLRN SPTISAVICYNDVIAMGAWFGLIRAGRQSGEGGVETFFGHQVALGAFADVGENALDDLPI VWATTPAREMGYTLADRIMQRIEKADVQAGHQIVAARLVTAK >gi|333596726|gb|GL892086.1| GENE 418 473770 - 474138 140 122 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 65 1 65 450 117 89.0 6e-27 MTTKAAQKISLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPFLGNPVLQ AIFIWRLLSLLTKWLDVGLMCGNFCYVAAIRFVMCNVLTSFRGNFMPHLCPITPPCHPAS RC >gi|333596726|gb|GL892086.1| GENE 419 474104 - 474421 279 105 aa, chain - ## HITS:1 COG:no KEGG:ECL_01351 NR:ns ## KEGG: ECL_01351 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 105 1 105 106 131 62.0 1e-29 MGFPSPAADFVAPRLSPEIICGIGMGSRILETSSGFAVIEPCTRLVQNQVLLILSGGRTQ FARVMGRALICDNGEAIEGEAAEEVEVMGRVTFFINSVMQDDRVV >gi|333596726|gb|GL892086.1| GENE 420 474421 - 474660 118 79 aa, chain - ## HITS:1 COG:no KEGG:ECL_01350 NR:ns ## KEGG: ECL_01350 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 79 1 79 79 125 77.0 5e-28 MPRTADIHAAFVAVIELNPKGYRYLSTDAFIEKLREFNWHYTREEANAWIERYQKDFADK TTDGSDNRYWILRNMGRVH >gi|333596726|gb|GL892086.1| GENE 421 474773 - 475135 223 120 aa, chain + ## HITS:1 COG:yfdG KEGG:ns NR:ns ## COG: yfdG COG2246 # Protein_GI_number: 16130282 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 120 1 120 120 163 82.0 6e-41 MLKLFAKYTSIGVINTLIHWVVFAVCIYAFHTGQALGNFAGFVVAVSFSFFANARFTFKS STTTLRYMLYVGFMGSLSAIVGWCADKSGMAPIITLIVFSAISLVCGFIYSKFIVFRDAK >gi|333596726|gb|GL892086.1| GENE 422 475132 - 476049 555 305 aa, chain + ## HITS:1 COG:yfdH KEGG:ns NR:ns ## COG: yfdH COG0463 # Protein_GI_number: 16130283 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 302 1 302 306 560 89.0 1e-159 MKISLVVPVFNEEDAIPIFYKTVREFEGIQQHEVEIVFINDGSKDATESIINALAVADPL VVPLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR SDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKLMPERNLFMKGV LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFVAGLS FLYGAWMIVDTLAFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYVEVKNRPRYI LKGNK >gi|333596726|gb|GL892086.1| GENE 423 476540 - 476737 61 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSVSSTCELIIPPLPFISKERAFHVIDDNKVEVKKEKHDAIPSNIPFLNDFLNSSAQKK HAITR >gi|333596726|gb|GL892086.1| GENE 424 476997 - 477473 -169 158 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALAVNGDNWLTTVGSWLYLFAGLILCVSYANATKANNEYIDSIISMARPYIYSTDESNL VINGEVKRPARVKIYDDKFPIIKHLIPTYMSNSWTWGVAQFKRTDSIGERAWGLRGERRV NAIKNICSMRVALANKDFTLYSDSNISILDFNKVKCAN >gi|333596726|gb|GL892086.1| GENE 425 477499 - 479613 176 704 aa, chain - ## HITS:1 COG:no KEGG:ESA_03029 NR:ns ## KEGG: ESA_03029 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 140 1 140 663 173 62.0 2e-41 MATQPTNLPVPSESPRDLKFNAGKIDEFVTSPAHTYTDRFGNQHRTIAGINYTASTAISS LGYITLDSFEDGNNLTLPNQVLRYEATGEYYRWDGELPKSVAPGSTPETSGGIGPGAWLS VGDASLRTDLASGEKASLVGYGSSTVKDALDSVVNKRVLYFSRFGTLQSLQSYITSNNLK NVEIIFDQVVNFGPGSGGLGTIVTLSNMDWLEIRGLVIRDTLLYSGAFDLTRVFDLKNIT NLVFEVDASSTLEYVGDDKRGLTPLRLNGCDNFTFIGKTSKCYEGYECVNVKNLYARSVN NDTRYPHMLGTVGTVDIHTVNNGCRRDFFLTNNCGGGDITVDAVDTQQGTPIKMYFYNGN MDNQISNLVVNYKYRSTGRYDSILPARTPPIWLEWGWDSTTTEPLINGIMRNIEINYDVV GGTWGAVIGTRKLIDETVGDTNSRGYVFSNITVKGRIELGGGGTGNNAVFFNFRDADNWK AGDTVNGFACKDLVVVKRNGGNVVLNVSQLMSAVTNYGGVTFDNVSAPAGVTDTTDYSKV KFRDCVFSDFASMGATPDVSKSASGSFMLIKAAEDSRNFKIGTISTYRNVSLWTIDIVAN SPWSGVTNAWHGRIQGTLSAGSTPAALTMEGAVQSTYTKGTAATPTVSADINGNVFLNFA GWDSLEANIAVRVSMQYDEFSGGVNKSVRGMLGKQNGGFSLALS >gi|333596726|gb|GL892086.1| GENE 426 479671 - 482148 1529 825 aa, chain - ## HITS:1 COG:no KEGG:ECL_01345 NR:ns ## KEGG: ECL_01345 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 825 1 825 825 1595 97.0 0 MALVEISNFPGTPKLRCRVPNGTLFYDWLAANDATFHRDLLIVRNGVKLGDDDELAFELS ELDHIQIFDQPKGIVGDILSPIFKVVGQVFSFLAPKPAIANSGGNTVDSPNNSLTGQTNT ARVYKAKPDIYGQIRSFPDLIQESVFEYVHQTSTDGGLKYVTEWMCIGIGKYDYESVRYS ESSLGSLAGAEFQFFQPGEVIPQIVEGYGFDDVDGQEVPGQNEASDFPIETATANTVVSG TYSGGQIAMKIVKQAEFDYFMGLVLPHAVTFTINVTYSTASGNVTTDATFSGTLISAVET NDGAVVNPVRWYTFTMNQLEGPQDIPANATINTTKFILNDNEALVVGPFFSPVESTQLWL HTQSSLGGKKETNWKVVIWKIDDDYNQVPGTQQTFTYRQTTPHQSTSEVFYRTDKITPTG GFGKYAVSFQRTDNSGDASLLKVEEIHSINIRTNVVHPTDTLVRVKVRATENALGSRERK YNALVTRHTITYDLDTQTVDYTLRPSRSFADAVAHTWLIMGEQPVSSIDLYGLYSIAESL PDERLGYFDYTFDDENDSLGDRVQAICNAASVVAYWDDGVLTFTRDQKVDYPAAVFNRAN MKTDEYKMTYEATLPGGYDGVQVSYVHPTTNNKTYINYRVLNGAIVEQEAENPNKLEIVG FRNEYQARERALRETKRLIYSRVKMNAKVFEDGIIQVGSVIQMPDIYDSNQQQGYITGRA GNNFDTSEPITFTGSMYVLVTDSLGNPTLRYPATARSDTKYGFTAAIPDIQLNIWNGDTV QLPSRYLIATVEELDSQLWTVNSIKPNTDNTVSLTVAEYSDAIYQ >gi|333596726|gb|GL892086.1| GENE 427 482135 - 482551 240 138 aa, chain - ## HITS:1 COG:no KEGG:ESA_03031 NR:ns ## KEGG: ESA_03031 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 138 1 138 138 256 86.0 3e-67 MTQRNTLAFSTSDFISRIIGVPWSNRACSFEKTDCWGLVVLYYRHVLDIELHQTPGYEAG EDFFTCYQGDVVFWRKVDKPVDGGIFVGYRGAQPAHVGLVLNRQALHSRGENGSVRMDSL LVIQRAFTKVEFFEYGAG >gi|333596726|gb|GL892086.1| GENE 428 482514 - 482984 329 156 aa, chain - ## HITS:1 COG:no KEGG:ECL_01343 NR:ns ## KEGG: ECL_01343 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 156 1 156 156 298 98.0 5e-80 MPSFREYKQQRPTRGLYDTITFYHPSFGYVRLVDKQFFPKTLGGQTYTPARFEIEESQQS GTPVIDATVKLGRLSSDIKALMKQWKGAARLTAITATRQIFDSGDVSVPIKSWQLYVKTV DIDADSASVTLSVTNPLNNNIGRLYDPTEYTGLQYL >gi|333596726|gb|GL892086.1| GENE 429 482984 - 483481 472 165 aa, chain - ## HITS:1 COG:no KEGG:ECL_01342 NR:ns ## KEGG: ECL_01342 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 165 1 165 165 312 98.0 4e-84 MPIIDYPDWLPLAQKASKNMTLDTGFQTDQPAVGPAIFQNLTDDLKVTWSLTWIFTLAEE RAFQQWLRSPNYLNRGLNWFRMNINLGGSGLQLQELHFTQMPVQTSIDGGVVTWTGTVIS NHLYNADDEFDDIIVELPPPWDSWLDIVVTGYPDGRDPESLPRVP >gi|333596726|gb|GL892086.1| GENE 430 483761 - 486664 1685 967 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_2114 NR:ns ## KEGG: Pat9b_2114 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 5 911 3 961 1009 687 51.0 0 MAGEKNAGSIVYEISADVEPLLQGGKQAIDALDKLDAAAQQSGKGMDNLDESASQTGAAF TELAGYANSMDNQLRKLNTNVSGIARAMEEARSGTGGASSEFSRAESIIEALGNQLAVLD EAQENGARSAAVLAAQLRAGSKATDEEKQKIGELTGRLFDMKGAADTSMGSNKGWKSSMQ QAGYQVQDFIVQVQGGQSALVAFAQQGSQLAGAFGPGGAVVGAVIALSSVIAGVLITSLN GGKNAMDALKDAAEAMDKVITISQNGVAALSDKYANLARTNAEAATILRNQAMIEYNAAI AKIPKSINDASSSIVGFTDKLKTSFVGGIASIDEFNKNLSTVGATADNYSAAMEQARDAG AKFTVNANAIQNTVTTLADKFGVSEQRAFELSKQLSDVANNPTPEALQRLVLELQSTESS TKSGADAIRTFLGPLTELVRVAGEAQINLSGMKKEVDNLTSGQKNLIKQSERNLALSKLQ GEARARLQAQYAAEDAGFAKDDPHAKQMQDDAAATYKNTQAQKTLQTEQKKGASQADSIA QKLANLKQQSELAAESTNNLSREQAILNAQQSLGKGATKEQIALAGQYAATKWDTANALK AQAAAEKLLPEARENASYKQDVQDLNTALAAKKISQEQFNQTSERLEATHQANLAKIRAQ QAVTPQQEAVAQVDPVQQLANQHAQQLALIQQFEQQGLLAHQNALALKNAADTQYEQQRT AAQWELLSQQSLGYSMLTSAVDAFSGNASNALTGLITGTMSAQDAMRSLGNTMLNSVVNA LVQVGVDALKNFIIGQTLGAAATAAGASQAAILATAWAPAAAMASLASFGANSVPAMTGI ASTVGLAQGLALTGMRYNGGPVNAGGLYQVGERGKPEIYQASTGKQYMIPGDNGRVISNK DMTAGGGVSVIINVQNMTSATFDAQATNNGDGTITVDAIIADLNNGGPISQAITGNTTAK RTPRGQL >gi|333596726|gb|GL892086.1| GENE 431 486677 - 487348 357 223 aa, chain - ## HITS:1 COG:no KEGG:ESA_03036 NR:ns ## KEGG: ESA_03036 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 2 222 3 225 229 229 52.0 9e-59 MTALTDIGELSISDSCEGGKDYLLRPSFEAMTRIGTPEEIVQAYATIHGNDVAHLIEVCA GTLGRFPEWMSPSFSRAAEKLLSTCMLVLQACCEDDLTPMIGEWKGWRHCVVYRPGQMPK NDIIVLAQHLMQHGVVGKAKVRQLQRHETGERTTEFKAFDYISAARSHFGMNRAEASQLT MTEFQMLLAAKYPDQKGFTRDEYDSIADEYLAKQAARRAKAKQ >gi|333596726|gb|GL892086.1| GENE 432 487406 - 488149 732 247 aa, chain - ## HITS:1 COG:Z1894 KEGG:ns NR:ns ## COG: Z1894 COG5492 # Protein_GI_number: 15801361 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 EDL933 # 160 247 167 254 256 66 44.0 4e-11 MANCQNSNERLFGGAVVLEVADGCPDVKPLEGEWMALAAGTSKGFDFNPNSVTSDADDGG GYVETIITNSDFTLSFEGEVRKKDKLDQYGVGKFIKYFADELKAKRQPGIWVRMDYGPVE FVGYMNITALSSDGGTNDIVTFSTEFKVGDATTIEVNELTAVAVTGVTVTPATSTGTAGG TSTFTVNIAPTGATNKDFTVATTDATKATATASGNTVTVTRVATGSAQIIINTEDGNFVA VHTVTVT >gi|333596726|gb|GL892086.1| GENE 433 488213 - 488596 328 127 aa, chain - ## HITS:1 COG:no KEGG:ECL_03189 NR:ns ## KEGG: ECL_03189 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 127 1 127 127 248 96.0 4e-65 MTPMMHERVRNMFGDAGLTTGFTVQQLMYDDPGDLSKAIMVFRPNGGSNIRTDLGSEYHV LVDVVGAKDKRKDALNAVQRIVDYVKANPMADECVGYIQNMGAIPAPVLTEEGRIVFRLQ FACTFGD >gi|333596726|gb|GL892086.1| GENE 434 488593 - 489057 488 154 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_2119 NR:ns ## KEGG: Pat9b_2119 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 1 154 1 146 146 191 64.0 6e-48 MGIKVKGISQAKKHLNDVINDVKGRKVIRALQSAMILIGARAAYYTPIDTSTLINSQFRE IDAGGVLITGRIGYSANYAAYVHEASGKLKGQPRAHFGVTSNRSEFGPQKPKEFGGGTGT GNYWDPHGEPQFLTKGANDERDNVDAVMRKELSL >gi|333596726|gb|GL892086.1| GENE 435 489060 - 489410 434 116 aa, chain - ## HITS:1 COG:no KEGG:ECL_01335 NR:ns ## KEGG: ECL_01335 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 116 1 116 116 209 95.0 4e-53 MSSVANWSYTATATIWRKLEGNDEYGDPLGYAEPEQILCDYEGGLSKKLASLGAEIVVKN TVWTEFALAAAGDYLLIGVSTEADPVVAGADEVRQVIRYADTFERLADDYAILTGV >gi|333596726|gb|GL892086.1| GENE 436 489407 - 489640 125 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261340346|ref|ZP_05968204.1| ## NR: gi|261340346|ref|ZP_05968204.1| ArsC family protein [Enterobacter cancerogenus ATCC 35316] ArsC family protein [Enterobacter cancerogenus ATCC 35316] # 1 77 1 77 77 134 88.0 2e-30 MAERYDVHAFKCEDSWSLFIWINDSGVKFIGRHAETYEKAKADFLEQADAKRLASQSGAM RPLDDFKIVEKVEVFAL >gi|333596726|gb|GL892086.1| GENE 437 489806 - 490186 383 126 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1802 NR:ns ## KEGG: Kvar_1802 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 126 1 126 126 222 95.0 4e-57 MADPITAADVQAFLGELGYSIPGALLEPILCVVNKIIPCLDGAGYDECTAKLILMYAAAL MATSSGARRIKSQGAPSGASRSFEYGDDSITWLRDSLARLDTSGCTGELPISAGNSVGLF MVVGGC >gi|333596726|gb|GL892086.1| GENE 438 490189 - 490554 316 121 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_2122 NR:ns ## KEGG: Pat9b_2122 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 1 105 1 106 122 82 61.0 8e-15 MALVEIVASNLHAGANLRKLEVGSVVDVDDATAERWISTGKAKDTDKKKGEKLTFEVATP SAPATDLTALQKQLADALEQNQKLIADGEAKDKAHADALAAETKRADDAEAALAEAIKKA K >gi|333596726|gb|GL892086.1| GENE 439 490564 - 491661 1095 365 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1800 NR:ns ## KEGG: Kvar_1800 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 365 1 365 365 543 74.0 1e-153 MFVFSKSIGEKTGNLAVNQAQWRALELERNASAQAAADFLARTQFRGDAENAPYLDAVNA VDDIRRLYRAFDTTVLQQFEPNTEFTLLNDLMPLSRSVRIEQSRYDYARTGGRGWAHTSM SGQVGAALDARSYSFDGTMVPIHDSGFKFEWRDPIFNSPQALQSQSDAQRGSVEDVQRRY VDYIFNGFRDKAGNFAVFDGLTWKGLRDDERVAQIDLGASGLNIDFTSGTATSQAIRAGA IALRDQMRRVNNQYAEQTWYVSGEIISNLERYFSDNFQSGTIMDEILKLTGVAAIKEDSQ LSGNEIVIVPLSAGVIAPIVGQAIGTVASPRPEYNSDYIWRTWGAMGLMVKQDINNKYSV IHASS >gi|333596726|gb|GL892086.1| GENE 440 491672 - 492106 437 144 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1799 NR:ns ## KEGG: Kvar_1799 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 144 1 143 143 184 71.0 9e-46 MAKDGKHIIHAGGVFPNPLLNREGGAAASTLPGTVGFFSTADKFTASVVGAESAIKYVAS KDYLRCLSVDDAIPANELVVGIHPLPGMFLNVRAAAGTYTKGQPVAVANGQITAVVDDAA VFAYVEEDKAVTAVAGDLIRVVFK >gi|333596726|gb|GL892086.1| GENE 441 492194 - 493495 1584 433 aa, chain - ## HITS:1 COG:no KEGG:ESA_03048 NR:ns ## KEGG: ESA_03048 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 433 1 439 466 481 60.0 1e-134 MKRNRVNVLTVVNSASNITTETIDGKPHIVVRGITPVVDDIVMNRKLYPAAEIEKAYNTL ERNPMPLGHPKVDGKHVSARDVRAVNEYHVGAWLQNVSHKDGKVMGDMYVNRQYAESSEK GKRLINRLDEMLAGTNSDPIHISTGLLYSGIAANGESKGKKYNEIATNMMFDHVAVLLDE PGAGTPEEGVGIFVNSEGDEQQIEVARLADGIDCTRDGLINKTKFFFTNASNFSFDDISR AISDKLREGDAEDKWLWPETVWPDSFIYRNDTKYLKQKYLIDDDGKAVFVGEPVEVVRKP TEYEIKTNGENDPMKELIINALQAAGKPTEGKSDAELMDAYNQMKAEEATAKKKGDEEID PETGKPKKKEQATNNEEMPAWAQKLADRVDVVFNSLNAKTDKEKGEKRAAVKLAMNMSDE EVADLDGKALDAM >gi|333596726|gb|GL892086.1| GENE 442 493813 - 494709 635 298 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1796 NR:ns ## KEGG: Kvar_1796 # Name: not_defined # Def: phage head morphogenesis protein, SPP1 gp7 family # Organism: K.variicola # Pathway: not_defined # 1 295 1 295 300 482 84.0 1e-135 MFNVIEDRYLNIKRRLKALFDQRLTGQQREANAQRSWMMCNNEGAEPSLYQVNAGKFIYD MTAAELADLLQVVQSILDDELLEGGSQNLWAMDYVIAEYDRGTLNAFTNLSVQSQVYASQ TTLQQLLSSPGYLNQIAAARLTTFSDWKVISDTARGDLTNIITDAVARGVNPRETSSVIS KRLDVSMSKAKTIAQTEQVGALRQAQWNETDWAADRLGLNTGLLWLSALKPTTRTWHASR HGKVYTTEEVRDFYAENGNRYNCYCSQIPVLLNDDGSIFNEGLTERLKKERMSWKEGA >gi|333596726|gb|GL892086.1| GENE 443 494747 - 496138 696 463 aa, chain - ## HITS:1 COG:no KEGG:Ctu_11710 NR:ns ## KEGG: Ctu_11710 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 448 1 446 462 707 78.0 0 MLYAGQPGNTKRTKLWDEFGYPNSLEFDRYYRAYERNAVAFAAVHKLLDSCWVDNPTIID GDGGKESTETTDWEKSATKLLKKHWPKIKDADRRNLVGRYSALLIQFRDGREWHEPVDRA KVKSLRNIGSGPIVKLIPAWESQIKPGNFDTDTLSETYGQPVSYNFNEQPVGDDGTYGPV RGVTVHPERIIILCEGSEDENMLSGVPFLRAGYNKLLDLEKVSGGSAEGFLKNASRQLGI AFDKETNIANLSKQAIESGYKDLGEALNDKVAKMNRGTDAALVMQAGTPSVLSVAAADPS PTWTVAANEFASSIQCPFTILFGQQTGRLASDEDKTDWAKRCNGRRWGFQSTVIESVLER FWTVGVIDPPSSGEVTLAWSDLLAPSEKEKIANMQAMAVVAKDTQQAYGTPAVDENEIRA VGELEPRKVVSPPNPDVKQTDKDPLTDDDDSANQNRDANRTAQ >gi|333596726|gb|GL892086.1| GENE 444 496219 - 497691 1098 490 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1794 NR:ns ## KEGG: Kvar_1794 # Name: not_defined # Def: phage terminase large subunit # Organism: K.variicola # Pathway: not_defined # 1 490 1 490 490 976 95.0 0 MKPEHIKLLSDKDWRLNNLYWITDKEGKPTRFRMTPEQREYFEGIHTRNIILKARQLGFT TEVCIIQLDAALFESAKCALIAHTLNDAKRLFREKVKYAYDKLPAEIKAANPASNDSSGE LVFKKGGSLYVSTSFRGGTLRYLHVSEFGKICAKYPDKAREIVTGAFEAVSTGCFATIES TAEGRAGYFFDYCQTAEKALLQGKPLSALDWKFFFFSWWKNPQYAIDPVESLPVRLLEYF AEMEAKHGVVVNDRQKAWYYAKEKTLGDDMKREYPTIPAEAFQQSVEGAYYAKQFRWLYT NKRIGQIPDNSHLPVHTFWDIGVGDSTAIWFVREVGEEFHIIDYYENSGEGLRHYMKVLK DRGYEYGEHWGPHDIDNREFGADAKSRRELAREGYEIDGQVYSMTFQVVPKVGVDTGIES VREILPSCVFDEEKCAEGISHLEGYRKEWDDKRGCWKDKPLHDFTSHGADGFRYFAVAKN NHKQVGAVFF >gi|333596726|gb|GL892086.1| GENE 445 497691 - 498293 655 200 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1793 NR:ns ## KEGG: Kvar_1793 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 200 1 200 200 327 97.0 1e-88 MSKPDWEAIETAYRAGVMSLREIASQHGISEGAIRKRAKRDDWSRDLNAKVKERADDLVR KAEVRKQVRSEVTFNERVLIEATAEVIASVRMEHRGDIKRARQITNALFDELGAECADVA ALEKLGELMFDPDDKGQDKLNEIYHKVISMPERVKSVKALSDALKNLIGLERQAYDIDGP EGDNSVKQLSDLMDSLSQGA >gi|333596726|gb|GL892086.1| GENE 446 498297 - 498503 188 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAKIGPITVTLDMRWHVARSREVLEELQRRVSELSPRISEDDALRTLLLDMTFDYLKAK SQVEQTTE >gi|333596726|gb|GL892086.1| GENE 447 498500 - 498709 151 69 aa, chain - ## HITS:1 COG:no KEGG:ECL_01322 NR:ns ## KEGG: ECL_01322 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 64 1 64 72 108 96.0 9e-23 MSDIYQITLTTQTGETFTGKMSRRQPELVNGFVPLATETGQWLYFAPADVKRVEFTPVPA EGETEESAS >gi|333596726|gb|GL892086.1| GENE 448 498804 - 499106 62 100 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0885 NR:ns ## KEGG: ECUMN_0885 # Name: not_defined # Def: putative Rz1 lytic protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 9 95 21 107 107 91 56.0 1e-17 MLSTSGRRLKGISVLSSLFLLPLLTACGNTRTVYVPAPVVLISADLTADTPIPGMAVPFT WQASLELNAQLYTALGQCNLDKAAIRKIESSRQGKNAQPQ >gi|333596726|gb|GL892086.1| GENE 449 498973 - 499350 258 125 aa, chain - ## HITS:1 COG:no KEGG:Kvar_1791 NR:ns ## KEGG: Kvar_1791 # Name: not_defined # Def: lysis protein # Organism: K.variicola # Pathway: not_defined # 1 125 1 125 125 181 86.0 1e-44 MNRLTAIISAVVICLIVSLGWLASHYHDNAITFKEQRDKATARAETAETVSNSVVTAMNL INDISRVTQNAKTELSQAGEQHVIYIRQALEGDQCAKQLVPAAAADSLREYADGLRAGAR GTDKR >gi|333596726|gb|GL892086.1| GENE 450 499347 - 499826 223 159 aa, chain - ## HITS:1 COG:ECs1622 KEGG:ns NR:ns ## COG: ECs1622 COG4678 # Protein_GI_number: 15830876 # Func_class: G Carbohydrate transport and metabolism # Function: Muramidase (phage lambda lysozyme) # Organism: Escherichia coli O157:H7 # 1 158 1 157 158 256 83.0 1e-68 MLELNKQRRAFLDMLAWSEGTDKPRQNTKNRGYDVIVGGSLFSDYSDHPRKLVNLPKLGI KSTAAGRYQLLSKWWDAYRKQLGLKDFSPASQDQVALQQIKERGALPLIDNGQIRQAIDR CSNIWASLPGAGYGQFEHKADNLIAKFKAAGGVVAEVQP >gi|333596726|gb|GL892086.1| GENE 451 499810 - 500133 271 107 aa, chain - ## HITS:1 COG:no KEGG:KPK_2847 NR:ns ## KEGG: KPK_2847 # Name: not_defined # Def: phage holin, lambda family # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 107 1 107 107 181 97.0 6e-45 MRMPYKQDFIAALLAAKEQGIGAILAFIMAYLRGRYNGGAMAKTLIDAVMCAMIAWFVRD LLDFIGLSSNLAYIASVFIGYIGTNSIGNLIKKFAARKAGVDDAGTQ >gi|333596726|gb|GL892086.1| GENE 452 500778 - 501467 636 229 aa, chain - ## HITS:1 COG:no KEGG:ECL_01317 NR:ns ## KEGG: ECL_01317 # Name: not_defined # Def: phage antitermination protein Q # Organism: E.cloacae # Pathway: not_defined # 1 220 1 220 225 349 87.0 4e-95 MNIQQLEYVRQQLIVATADLSGATKGQLVAFAENAQFTATARSRGRKKITDPVTGRKVNP DGPAMSGSQSRAKGSSIALVGPVEFVTASWRRAVLSLEDHQKAWLLWNYSENIKFEYQVA ITQWAWDEFREQLGTKKVAGKTLERLKKLIWLAAQDVKAELAGRETYEYQSLASLVGVTP KNWSETFTDRWVDMRRIFLRLDSGALLQVTRSRSQQKATNFDRSLAKLD >gi|333596726|gb|GL892086.1| GENE 453 501577 - 502209 286 210 aa, chain - ## HITS:1 COG:no KEGG:ECL_01316 NR:ns ## KEGG: ECL_01316 # Name: not_defined # Def: bacteriophage lambda NinG family protein # Organism: E.cloacae # Pathway: not_defined # 1 210 1 210 210 341 97.0 1e-92 MRKPSRRKCKVCGEYFVPKFHDVRIRWCSPEHGAILAMEEREKEKVKAAAKRIKERKEKE RADRRDLKARKVALKTKPQWRSEAQTAFNRYVRLRDAGKPCISCGRLPEQKFGGTMDCGH YRTRGAAAHLAFNLHNTAAQCVYCNRDRDGAQKAFEQGLIERIGAEKVEVINNDNSVRRF DIPYLQRIKSIFTRKARALEKRRARRQEAA >gi|333596726|gb|GL892086.1| GENE 454 502581 - 503036 423 151 aa, chain - ## HITS:1 COG:no KEGG:SSON_2446 NR:ns ## KEGG: SSON_2446 # Name: ybcN # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 151 1 151 151 306 98.0 2e-82 MTLPVDGIKLHRGNFAAIGQQIQPLLDAGQCFRLQVKPWREKRSLSQNALSHMWYTEISD YLIARGKAFATPEWVKDAMKHTYLGYESKDRVDVVSGEVTTVQSLRHTSELETGEMYIFL CKVEAWAMNIGCHLTIPQSCEYQQLRDKQEA >gi|333596726|gb|GL892086.1| GENE 455 503215 - 503457 174 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSFDCLLFGAGHKGTPITIDGDFVERIMGPVAETTKKVPFEVKKYMVGGFTYAVAEHPPV SLTPEIVDAAITASGIQPLD >gi|333596726|gb|GL892086.1| GENE 456 503454 - 503702 228 82 aa, chain - ## HITS:1 COG:no KEGG:ECL_03215 NR:ns ## KEGG: ECL_03215 # Name: not_defined # Def: DNA polymerase III theta subunit # Organism: E.cloacae # Pathway: Purine metabolism [PATH:enc00230]; Pyrimidine metabolism [PATH:enc00240]; Metabolic pathways [PATH:enc01100]; DNA replication [PATH:enc03030]; Mismatch repair [PATH:enc03430]; Homologous recombination [PATH:enc03440] # 1 82 1 82 82 138 93.0 7e-32 MSDWNIAAKPQEERDKVNVDLAASGVAYKERLNMPVIAEVVMREQPEHLRDYFLERLKFY REKSITLPKGSDPDYLNKEEVK >gi|333596726|gb|GL892086.1| GENE 457 503918 - 504163 197 81 aa, chain - ## HITS:1 COG:no KEGG:ECL_01311 NR:ns ## KEGG: ECL_01311 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 81 111 208 208 134 73.0 2e-30 MEMDDDFDSAFEHGKAVGWNAYRAAMLQSFGNSEQLNSPVIPDGWVLVPEEPTHEMLEAG DEQFGTYDVYRRMIAASPQQK >gi|333596726|gb|GL892086.1| GENE 458 505245 - 506243 162 332 aa, chain + ## HITS:1 COG:STM0893 KEGG:ns NR:ns ## COG: STM0893 COG0582 # Protein_GI_number: 16764254 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 329 106 434 441 330 48.0 2e-90 MELSLGTLRRYDCHLTTTIETIGEHRHIGSLNTEDILSARKELLNGWQKTRHGLNHPPKK GRSVPTVNSYMACLGGMLSFAFKSGYLKTDLMAGITPLAKERPIPDPLTSDEYQRVVAAC PTLQFQNMVIFAVNTGVRHGELSALAWEDVDTVNWTVTVSRNYSMKGNFTLPKTNAGIRT IQLTQPAIDALKAQMPLTRMMASHKVSVSLREYKKKRTDECTFIFSPSITSMNGKKTMCY VPGSINSAWRTALRRAGVRQRRSYETRNTYACWALVAGANPNFVAHQMGHSSAQMLFTVY GKWMTENNHDQVGILNASFTQNAPLMPHRKTA >gi|333596726|gb|GL892086.1| GENE 459 506297 - 507694 1697 465 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 385 66 450 450 668 88.0 0 MSKVGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTAKGILPTT DAAVLKANNIQSVIGIQSIDTGILGAVIAGVIIWMLHERFHNIRLPDALAFFGGTRFVPI ITLVVMGLFGLIIPLIWPIFAMGITGIGRIINGAGDFGPMIFGTGERLLLPFGLQHILVA LIRFTEAGGTMDVCGHSVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLGGLPGA ALAMYHCARPENRHKIKGLLISGVIACVVGGTTEPIEFLFLFVAPVLYLIHAVLTGLGFT VMAVLGVTIGNTDGNVIDFVVFGILHGLSTKWYLVPVVAAIWFAVYYGIFRFAITRFNLK TPGRDTDTATSVEQAVVGSVGKSGYNTPAILAALGGADNITSLDNCITRLRLSVADMSKV DTNALKANRAIGVVQLNQHNLQVVIGPQVQSVKDELATLMRTVEA >gi|333596726|gb|GL892086.1| GENE 460 507743 - 508915 1143 390 aa, chain + ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 1 386 1 386 390 629 77.0 1e-180 MFDFSTVVDRHGTWCTQWDYVADRFGAADLLPFTISDMDFATAPCITEALHQRINHGVFG YSRWKNDEFLAAVAHWFRQRFNSQIDTETVVYGPSVIYMVSELIRLWSAPGDGVVIHTPA YDAFYKAIEGNQRTVVSVPMQKTAQGWEGNMAALEAALAKPENTILLLCSPQNPTGKVWT REELTTMAALCERYGVAVISDEIHMDMVWGTHRHTPWNAVARGKWALLTSGSKSFNIPAL TGAWGLIADDDSRNAYLHALKGRDGLFSPSVLALTAHIAAYQQGEPWLDALRAYLEANLR YVADELNRAFPKLNWQPPEATYLAWIDLNPLKIDDYALQNVLIEQQKVAIMPGYTYGDEG KGYVRLNAGCPRSKLEQGVQRLIAGISTLL >gi|333596726|gb|GL892086.1| GENE 461 509012 - 510013 1365 333 aa, chain + ## HITS:1 COG:STM1463 KEGG:ns NR:ns ## COG: STM1463 COG1816 # Protein_GI_number: 16764811 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Salmonella typhimurium LT2 # 1 333 1 333 333 602 90.0 1e-172 MIDTRLPLTDIHRHLDGNIRAQTILDLGRQYNLTLPAETLETLIPHVQVTSNEPDLVSFL SKLDWGVKMLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAMTHNLPVAGVVEAVI EGVREGCKTFDVQARLIGIMSRTFGEAACLQELEALLAHRDQITAIDLAGDELGFPGSLF LSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRALMDFLAEQRI GIESCLTSNIQTSTVASLAQHPLKTFLEHGVLASLNTDDPAVQGVDIIHEYNIAAPQAGL SREQIRQAQINGLELAFLTPEEKQALRDKVAIA >gi|333596726|gb|GL892086.1| GENE 462 510069 - 511109 976 346 aa, chain - ## HITS:1 COG:STM1462 KEGG:ns NR:ns ## COG: STM1462 COG0673 # Protein_GI_number: 16764810 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 346 26 371 371 640 86.0 0 MSENIRVGLIGYGYASKTFHAPLVAGTPGMELAAITSSDETKVRADWPAVPVVTEPKHLF NDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALARSLGRLLSV FHNRRWDSDFLTVKTLINEGTLGEIAFFESHFDRYRPQVRDRWREQAGPGSGIWYDLAPH LLDQAVHLFGLPVSMTVDLAQLRPGAQTTDYFHAILSYPQRRIVLHGTMLAAAESARYII HGARGSYVKFGLDPQEERLKNGERLPQEDWGYDMRDGVVTRAEGEALVEETVLTLPGNYP AYYAAIRDALNGSGENPVPASQAIQIMELIELGIESAKHRATLCLA >gi|333596726|gb|GL892086.1| GENE 463 511703 - 511918 299 71 aa, chain + ## HITS:1 COG:no KEGG:ECL_02304 NR:ns ## KEGG: ECL_02304 # Name: not_defined # Def: OriC-binding nucleoid-associated protein # Organism: E.cloacae # Pathway: not_defined # 1 71 1 71 71 136 98.0 3e-31 MTVQDYLLKFRKINSLESLEKLFDHLNYTLSDNQDIINMYRAADHRRAELVSGGRLFNVG EVPKSVWRYVV >gi|333596726|gb|GL892086.1| GENE 464 511992 - 512444 399 150 aa, chain + ## HITS:1 COG:no KEGG:ECL_02305 NR:ns ## KEGG: ECL_02305 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 5 150 1 146 146 181 94.0 1e-44 MGERMTALPGERIGGWLIAPLAWLLVALLSASLALLLYTTALVTPHAIQTLMSQSALNIA TWFVSFVFAIAMWYYTLWLTIAFFKRRKSVPKHYIIWLLVSVLLAVKAFAFSPVSDALAV RQLLFPLLATALLVPYFKRSTRVKKTFVNP >gi|333596726|gb|GL892086.1| GENE 465 512521 - 513102 793 193 aa, chain + ## HITS:1 COG:STM1459 KEGG:ns NR:ns ## COG: STM1459 COG4657 # Protein_GI_number: 16764807 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 283 94.0 1e-76 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTMASICAWLID TWILIPLDMLYLRTLSFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVA LLNINLGHNFLQSALYGFSAAVGFSFVMVLFASIRERLAAADIPAPFRGNAIALVTAGLM SLAFMGFSGLVKL >gi|333596726|gb|GL892086.1| GENE 466 513102 - 513680 520 192 aa, chain + ## HITS:1 COG:STM1458 KEGG:ns NR:ns ## COG: STM1458 COG2878 # Protein_GI_number: 16764806 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Salmonella typhimurium LT2 # 1 192 1 192 192 311 83.0 5e-85 MSAIWIAVASISVLGLVFGIILGYASRRFAVEDDPVVEKIDELLPQSQCGQCGYPGCRPY AEAVGVQEEKINRCAPGGEAVMLKIAALLNVDPQPVDGDEQAQEPVRALAVIDEANCIGC TKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQCIELRPVETTTENWKWDLQT IPVRNIPVEQHA >gi|333596726|gb|GL892086.1| GENE 467 513673 - 515694 2088 673 aa, chain + ## HITS:1 COG:Z2636 KEGG:ns NR:ns ## COG: Z2636 COG4656 # Protein_GI_number: 15802043 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Escherichia coli O157:H7 EDL933 # 1 673 1 675 740 909 81.0 0 MLKLFSAFRKEKIWDFDGGIHPPEMKSQSNGTPLRQIPLATRYVMPLKQHIGAEGELCVK EGDSVLRGQPLTFGRGRMLPIHAPTSGKVVAVAPHTVAHPSALSELSVIIEADGEDRWID RDGWSDYRSRGREALIERIHQFGVAGLGGAGFPTGAKLHGGGDKIETLIINAAECEPYIT ADDRLMQDCAAQIVEGIRILAHILQPREVLIGIEDNKPQAISMLRAVLADSHDIALRVIP TKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPLTERVVTLT GESVSRPGNVWARLGTPVRHLLEQAGFCPGSDQMVIMGGPLMGFTLPWLDVPVVKITNCL LAPSPTEMGETQEEKNCIRCSACADACPADLLPQQLYWYSKGQLHDKAQAHNLADCIECG ACAWVCPSNIPLVQYFRQEKAEIYAISMEEKRAAEAKARFEARQARLEREKQARQERHKQ AAVQPAAKDQDAINAALARVREKKATASQTVVIAAGEKPDNREAIAAREARKAEARARQA EKAQNAKPEADIDPRKAAVEAAIARAKARKAAEQTVVVEQNATDPRKAAVEAAIARAKAR KAAQLQPAEESEAPVDPRKAAVEAAIARAKARKAAQQDELPAAAHDDPRKAAVAAAIARV QAKKAAQQAVNED >gi|333596726|gb|GL892086.1| GENE 468 515695 - 516747 1313 350 aa, chain + ## HITS:1 COG:ECs2339 KEGG:ns NR:ns ## COG: ECs2339 COG4658 # Protein_GI_number: 15831593 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Escherichia coli O157:H7 # 1 350 1 350 352 557 83.0 1e-159 MVFRIASSPYTHNQRQTSRIMMLVCLAALPGIAVQCWFFGWGTLFQLVLGCASAVTAEAA ILKLRKMEVTRILSDNSALLTGLLLAISIPPFAPWWMVVLGTVFAVIIAKQLYGGLGHNP FNPAMIGYVVLLISFPVQMTSWLPPHEIAATVPGFMDALHVIFTGHTALGADMNALRMGV DGISQATPLDTFKTALRAGHSVEQVMKSSIYHGVLAGAGWQWVNLAYLLGGAFLLQQKAI RWHIPVSFLVTLAVCSTLGWVISPESLASPQLHLLSGATMLGAFFILTDPVTASTTNRGR LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR >gi|333596726|gb|GL892086.1| GENE 469 516758 - 517378 702 206 aa, chain + ## HITS:1 COG:STM1455 KEGG:ns NR:ns ## COG: STM1455 COG4659 # Protein_GI_number: 16764803 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Salmonella typhimurium LT2 # 1 206 1 206 206 323 75.0 1e-88 MLKTMQKHGVTLAIFAAALTGLTALVNELTKTTIEEQAIKQQKALFDQVIPSDFYDNDLQ QSCFVVQAPQLGKGPHRVYIARKGDNPVGVIMEATAPDGYSGAIQLLVGSDFSGTVLGTR VTEHHETPGLGDKIETRLSDWILHFAGKMIHGEDDPAFAVKKDGGEFDQFTGATITPRAV VNAVKRAGLYAETLPAQINHLSTCEE >gi|333596726|gb|GL892086.1| GENE 470 517381 - 518067 855 228 aa, chain + ## HITS:1 COG:ECs2341 KEGG:ns NR:ns ## COG: ECs2341 COG4660 # Protein_GI_number: 15831595 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Escherichia coli O157:H7 # 1 224 1 224 231 335 84.0 5e-92 MSQVKEVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNFSISVLR RWTPSEIRIPIYVMIIASVVSVVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAV KNNPAISALDGFSIGMGATAAMFVLGSLREILGNGTLFDGADALLGGWAKSLRIEVFHTD TPFLLAMLPPGAFIGLGMMLALKYLIDEKRKRRAAERSVQEGIPEKAA >gi|333596726|gb|GL892086.1| GENE 471 518064 - 518699 645 211 aa, chain + ## HITS:1 COG:STM1453 KEGG:ns NR:ns ## COG: STM1453 COG0177 # Protein_GI_number: 16764801 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Salmonella typhimurium LT2 # 1 209 1 209 211 399 93.0 1e-111 MNKEKRIAILTRLRDQNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATALLYPVANT PQAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEEVEEKLLKVVPAEFKVDCHHWLI LHGRYTCIARKPRCGSCIIEDLCEYKEKVYP >gi|333596726|gb|GL892086.1| GENE 472 519315 - 520823 1982 502 aa, chain + ## HITS:1 COG:STM1452 KEGG:ns NR:ns ## COG: STM1452 COG3104 # Protein_GI_number: 16764800 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 500 1 499 501 816 88.0 0 MSTANNKPTEESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAVVLAIGYGLVAWSGHDAGVVYMGM ATIAVGNGLFKANPSSLLSTCYSKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKFGW SVAFALSFVGMLITVVNFLFCRSWVKDYGSKPDFEPVHMGKLLATIVGVVILAAVATWLL HNQGVARAVLGVVALGIVIIFAKEAFAMQGAARRKMIVAFILMLEAIIFFVLYSQMPTSL NFFAIRNVEHSILGIAFEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVL CSGAFLVLPLGTKFATDAGIVSVNWLILSYALQSIGELMISGLGLAMVAQLVPQRLMGFI MGSWFLTTAGAAIIAGKIANLMAVPENVTDPLVSLNVYGTVFMQIGIATAVIAVLMLLTA PKLNRMTQDDDKSAKAIKTANA >gi|333596726|gb|GL892086.1| GENE 473 520929 - 521534 952 201 aa, chain + ## HITS:1 COG:ECs2344 KEGG:ns NR:ns ## COG: ECs2344 COG0625 # Protein_GI_number: 15831598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 200 1 200 201 341 86.0 5e-94 MKLFYKPGACSLASHITLRESGKDFTLDGVDLMKKRLENGDDFFAINPKGQVPALLLDDG TLLTEGVAIMQFLADNVPDRQLLAPTGSIARYKTLEWLNYIATELHKGFTPLFRPDTPEE YKPTVRALLEKKLQYVNDALKDDQWICGSRFTIADAYLFTVLRWARAVKLNMDGLDHVAS YMARVAERPAVAAALKAEGLN >gi|333596726|gb|GL892086.1| GENE 474 521595 - 522455 948 286 aa, chain - ## HITS:1 COG:ECs2345 KEGG:ns NR:ns ## COG: ECs2345 COG2240 # Protein_GI_number: 15831599 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli O157:H7 # 1 286 2 287 287 532 91.0 1e-151 MKNILAIQSHVVFGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLT EIVQGIAEIDQLKRCDAVLSGYLGSAEQGEHILGIVRQVKAANPAAKYFCDPVMGHPEKG CIVAPGVAEFHVRHALPASDIIAPNLIELEILCEHPVNSVEEAVRASRELIAQGPEIVLV KHLARAGLSQDRFEMLLVTKDEAWHISRPLVDFGTRQPVGVGDVTSGLLLVKLLQGASLR DALEHVTAAVYEIMIATKTMLEYELQVVAAQDRIAKPEHYFSATRL >gi|333596726|gb|GL892086.1| GENE 475 522522 - 523796 826 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 393 7 388 418 322 44 3e-86 MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKR FQMAGHKPVALVGGATGLIGDPSFKAAERKLNTEDTVQEWVDKIRKQVAPFLDFDCGDNS AIAANNYDWFGGMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDQGISFTEFSYNLLQG YDFACLNKLHGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDIEEINALEEEDKNSGKAPRAQ YVLADEVTKLVHGEEGLAAAKRITASLFNGTLSDLSEADFEQLAQDGVPMVEMEKGADLM QALVDSELQPSRGQARKTIASNAITINGEKQADPEYTFTDNDRLYGRYTLLRRGKKNYCL VCWK >gi|333596726|gb|GL892086.1| GENE 476 523922 - 524578 718 218 aa, chain - ## HITS:1 COG:STM1448 KEGG:ns NR:ns ## COG: STM1448 COG0259 # Protein_GI_number: 16764796 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Salmonella typhimurium LT2 # 1 218 1 218 218 409 92.0 1e-114 MSDNDELQQIAHLRREYTKGGLRRQDLPAEPLVLFERWLKQACEAKLADPTAMVVATVDE NGQPYQRIVLLKHYDEKGLVFYTNLGSRKAHHLENNPRISLLFPWHMLERQVMVTGKAER LSTLEVVKYFHSRPRDSQIGAWVSKQSSRISARGVLESKFLELKQKFQQGEVPLPSFWGG FRIPIEQMEFWQGGEHRLHDRFLYQRDNGGWKIDRLAP >gi|333596726|gb|GL892086.1| GENE 477 524636 - 524959 333 107 aa, chain - ## HITS:1 COG:STM1447 KEGG:ns NR:ns ## COG: STM1447 COG3895 # Protein_GI_number: 16764795 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Salmonella typhimurium LT2 # 1 107 3 109 109 192 83.0 2e-49 MKKLLLIAVPFLMTGCSVYNQFVERMQTDTLEYRCDEKPLTVKLNNPRQEASFVYDNKLL TLKQGMSASGARYSDGIYVFWSKGDSATVYKRDRIVLNNCQLENPKR >gi|333596726|gb|GL892086.1| GENE 478 525053 - 526177 1128 374 aa, chain - ## HITS:1 COG:STM1446 KEGG:ns NR:ns ## COG: STM1446 COG2377 # Protein_GI_number: 16764794 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Salmonella typhimurium LT2 # 1 369 1 369 373 616 83.0 1e-176 MKSGRYIGVMSGTSLDGVDVVLAAIDENMVAQQASLSWPIPVSLKEEILNICQGQQLTLS QLGQLDVRLGALFADAVLALMQQERLHPQDIVAIGCHGQTVWHEPVGEAPHTMQIGDNNQ IVAKTGVTVVGDFRRRDMALGGQGAPLVPAFHQALLAHPVERRMVLNIGGIANLSMLIPG QPVRGYDTGPGNMLMDAWIWRQSGKPYDKDAQWASQGKVILPLLQTLLSDPFFALPAPKS TGREYFNYGWLERQLARFPGLAPQDVQATLTELTAVSISEQVLLSGGCERLLVCGGGSRN PLVMARLAALLPGTEVTTTDEAGISGDDMEALAFAWLAWRTVAGLPGNLPSVTGAREASV LGAIFPANPRHNQS >gi|333596726|gb|GL892086.1| GENE 479 526433 - 526900 449 155 aa, chain + ## HITS:1 COG:STM1445 KEGG:ns NR:ns ## COG: STM1445 COG3133 # Protein_GI_number: 16764793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 155 1 155 155 192 92.0 2e-49 MILRVLGVSLIGLTLAGCVNDSSLSGDVYSASEAKQVQNVTYGTIVNARPVQIQGGDDTN VVGAIGGAVLGGFLGNTIGGGTGRSLATAAGAVAGGVAGQGVQGAMNKTQGVELEIRKDD GSTIMVVQKQGNTRFSAGQRVVLASNGSQVTVSPR >gi|333596726|gb|GL892086.1| GENE 480 526950 - 527153 92 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHPSEKLTKRFLTNRQIASIENFKNKKEKGIAKSLKEGDKKYFAHGQERMKFNIHHVNVF SQMHFLK >gi|333596726|gb|GL892086.1| GENE 481 527095 - 528456 799 453 aa, chain + ## HITS:1 COG:ZycdT_2 KEGG:ns NR:ns ## COG: ZycdT_2 COG2199 # Protein_GI_number: 15801016 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 253 451 2 192 202 143 36.0 7e-34 MLAICRFVKNRFVSFSLGCIVIIALLQGLFIKLVQWVPSFSPLFFPTLTIFLLVFHLFIA CFMTMKYWCDRRRLYLVPIALAFAGSALLMVGTLSSFPAWLDLYQFNEANYNDAMIFYMF RHFLMAVLILVSAMLYTLRASPVSRSAHIAIVFGASLFTGCMLGLAWFYSSHSTMLALDL VDNETRQFMVLWSQTINIILIVLWAVTLITLMTITKVRNLFWVGGNFLCVCYIVTLLMLL LGGYAEDVSWYRARLFETVATLIIIFILLSDVFNLYRDSHLKYQQSYQNSIRDPLTRLYN RSYFYDSLNHALSTATPAHPVSVVVSDLDRFKRINDCYGHLQGDKVLQFVSNLLTDSVRP QDIAARIGGEEFVLMLTNTPSDLARQIAERIRLKLSGFDKASSGGHLPEPITISMGVFTA TSPQTSAETCVESADKAMYEAKETGRNRVVVFK >gi|333596726|gb|GL892086.1| GENE 482 528495 - 528935 389 146 aa, chain - ## HITS:1 COG:STM1444 KEGG:ns NR:ns ## COG: STM1444 COG1846 # Protein_GI_number: 16764792 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 146 1 146 146 219 87.0 1e-57 MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGI EQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAAPIITEMETVISKTRGEILAGI SPAELEMLIGLIARLEQNIHDLQSRD >gi|333596726|gb|GL892086.1| GENE 483 529081 - 529359 198 92 aa, chain + ## HITS:1 COG:no KEGG:ECL_02324 NR:ns ## KEGG: ECL_02324 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 15 92 1 78 78 112 87.0 4e-24 MPLWPSFHCKGSLLVTFFSFSAGLPLQDLIVGASVYFPPVFKAVMVGFVIWLVAHRLLRD WMYSGEIWHPMLMDLSLFTLSVCLGLAVLTVW >gi|333596726|gb|GL892086.1| GENE 484 529449 - 530222 613 257 aa, chain + ## HITS:1 COG:STM1442 KEGG:ns NR:ns ## COG: STM1442 COG1566 # Protein_GI_number: 16764790 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 257 42 298 298 438 84.0 1e-123 MQSPWTRDGKIRAEQVSITPQVSGSISALLVKDNQFVHAGDVLFRIDETPFHIAVLNAQA QLAKAQSDLAKANNEADRRRHLSRNYISAEDLDTANINVKTMQASLKVAEATLKQAEWQL TQTVVKAPVDGWITSLSTRVGDYATTGQPVFALVDSHSFYVVGYFEETKLRHIREGAPVR ITLYSGSETLQGHVSSIGRAIYDQSVETDSGLVPDIKPNVPWVRLAQRVPVRVEFDHLPK DITLVSGTTCTVAIGSR >gi|333596726|gb|GL892086.1| GENE 485 530222 - 532255 1553 677 aa, chain + ## HITS:1 COG:STM1441 KEGG:ns NR:ns ## COG: STM1441 COG1289 # Protein_GI_number: 16764789 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 677 1 679 679 1062 79.0 0 MNLGAFSWRNTPWIKATRPQWRYALRNGIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPT VGGVISKSLGRVAGSLLGATAALLLAGHTLNDPWLFLLSMSAWLGLCTWACAHFTNNVAY AFQLAGYTAAIIAFPVVNVLDTTELWDIAQARVCEVMVGILCGGVMMMILPSTSDGTTLI TALKTMHARLLEHASLLWQPDSNDDIRLAHEKVIGQILTMNLLRIQAFWSHYRFRRQNTL LNYLLHQQLRMTSAISSLRRMLLNWPAPPAHTREVIEALLATLARPDADIYTVARIIAPL APTDEYDYRHRAFWQRLNYFCRLYLRSSRWLKAVENATPVTEFSVPGSPALARHTDAMEA LWSGFRTFCALTTVGAWAITTQWDAGSAALTLAAISCVLYSVAASPFNSLTLLLRTLVLL SLFSFVVKFGLMVQITDLWQFLLFLFPLLTTMQLLKLQMPKLAGLWGQLIVFMGSFISVT NPPIYDYAEFLNDNLAKILGVGLAWLAFAVLRPGSDARKSRRHIRELRRGFVDQLSRRPH LRESEYESLVYHHVSQLNNSQDSLSRRWLLRWGVVLLNCSHVVWQLRAWETRSDPLSQVR DNCISMLRDVMSERGVQQRPLSVTLAELQRICDTLAHHHQPAARDLASIIWRLHCSLSQL EQAPPPGTIGDQITPQA >gi|333596726|gb|GL892086.1| GENE 486 532234 - 532752 510 172 aa, chain - ## HITS:1 COG:ECs2355 KEGG:ns NR:ns ## COG: ECs2355 COG2032 # Protein_GI_number: 15831609 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Escherichia coli O157:H7 # 1 172 1 172 173 262 82.0 2e-70 MKRFALAMVTLVVCAGAQAASEDVEMNLVTSQGVGQSIGTVKITETGKGLEFAPDLKALP PGEHGFHVHAKGSCQPAMKEGKPTAAEAAGGHLDPHNSGKHEGPDGMGHLGDLPVLVVNN DGKATDPVVAPRLKKLEEVKGKALMIHVGGDNMSDQPKPLGGGGARYACGVI >gi|333596726|gb|GL892086.1| GENE 487 532834 - 533730 1094 298 aa, chain - ## HITS:1 COG:ydhF KEGG:ns NR:ns ## COG: ydhF COG4989 # Protein_GI_number: 16129605 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Escherichia coli K12 # 1 298 1 298 298 539 86.0 1e-153 MVQRITLAPQGPEFSRFVMGYWRLMDWNMSPVQLADFIEEHLDLGITTVDHADIYGGYQC EAAFGDALKRAPALRERMEIVTKCGIATTAKPENALGHYITDSAHIVKSAEQSLVNLATD RIDLLLIHRPDPLMDADEVAEAFLALHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ VEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNDEAFQPLRNELETVARELNAE SIEQVVYAWILRLPSKPLPIIGSGKIERVRAALVAEELEMSRQQWFRIRKAALGYDVP >gi|333596726|gb|GL892086.1| GENE 488 533779 - 534102 130 107 aa, chain - ## HITS:1 COG:ydhL KEGG:ns NR:ns ## COG: ydhL COG3313 # Protein_GI_number: 16129606 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli K12 # 29 107 47 125 125 133 78.0 7e-32 MPCLWQTLLACKPFRVFTVGNNHVVEVGVAEQLEFFPVQSPCRGICQVDERGYCRGCMRT RDERFNWQNFSDAQKQEVLRLCRQRLLRKIRANKAVEPEEPQQPSLF >gi|333596726|gb|GL892086.1| GENE 489 534167 - 535807 1559 546 aa, chain + ## HITS:1 COG:YPO2377 KEGG:ns NR:ns ## COG: YPO2377 COG2194 # Protein_GI_number: 16122600 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Yersinia pestis # 6 540 6 542 545 685 57.0 0 MWLTKKLHCNDIKFTLACALFFTVLNALFIQRSWSIIAPAHLHDVLFAASVPLVLFCGWI IVFSLLNIPYIRKPLMIVLTMGCAAATWFMYTYGTVIDQNMIVNVFETNSQEATALVTPQ MILWLVVAGLVPSIILALTRIRTGKWWYALLTRFAAMLGALLVIILVAAVFYKDYASLFR NNKSIVKMVTPANYVSAVVKYSKMRWFAGDQTLVRIGEDAHKGALISGQHKKTVLVLVVG EASRAANYSLNGYPRETNPELKKQDVINFPQATSCGTETAVSVPCMFSGMTRKKYDADLA HHQEGLLDVLNHAGFNLLWRDNDGGCKGACDRVPHTDMTQWKLEQFCKDKSCIDDADLYR LDNVLDGLKQDTVLVIHLMGSHGPAYYNRYPASFRKFTPTCDTNEIQDCDHQSLINTYDN SILYTDSVVSRTIDALKARQASMNTALIYLSDHGESLGESGIYLHGTPYMLAPEQQTHIP FMFWLSPDYVKNFGVNTNCLRSHAAKEAVSQDNLFATVLGMMDVKSTAYQPQLDILSQCR REAGLH >gi|333596726|gb|GL892086.1| GENE 490 535834 - 536433 736 199 aa, chain + ## HITS:1 COG:ydhM KEGG:ns NR:ns ## COG: ydhM COG1309 # Protein_GI_number: 16129607 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 199 1 199 199 325 81.0 5e-89 MSRHTEHDTREHLLATGERLCMHRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAML ERHYASYHQRLATHFASGEGNYRDRVLNYYQETLTQFCQQGIISGCLTVKLSAEVCDLSE DMRTAMDKGASGVIALLAQALENGRNEQTLSFSGDPLTQAQVLYSLWLGANLQAKMSRSA VPLESALAHVKNCITAPGV >gi|333596726|gb|GL892086.1| GENE 491 536487 - 537584 1222 365 aa, chain + ## HITS:1 COG:nemA KEGG:ns NR:ns ## COG: nemA COG1902 # Protein_GI_number: 16129608 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 1 365 1 365 365 637 87.0 0 MSAEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASSGLIISEAT QISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGEAP VSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFDLVE LHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCKEWSADRIGIRVSPIGT FQNVDNGPNEEADALYLIEELAKRGIAYLHMSEPDWAGGKPYSEAFRQKVRERFHGVIIG AGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAELNPQRPESFYGGGAEGYT DYPSL >gi|333596726|gb|GL892086.1| GENE 492 537684 - 538091 216 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 87 38 2e-15 MRLLHTMLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPESDEAVIELTYN WGVDSYELGTAYGHIALEVDNAAEACERIRSNGGNVTREAGPVKGGTTVIAFVEDPDGYK IELIEAKDAGRGLGN >gi|333596726|gb|GL892086.1| GENE 493 538188 - 538847 811 219 aa, chain + ## HITS:1 COG:STM1434 KEGG:ns NR:ns ## COG: STM1434 COG0847 # Protein_GI_number: 16764782 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 1 211 1 211 215 403 90.0 1e-112 MSDNAQFTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLVPDTTLHF HVEPFEGANLQPEALAFNGIDPTNPLRGAVSEYEALHAIFKMVRKGMKENDCSRAIMVAH NATFDHSFTMAAAERASLKRNPFHPFVTFDTAALSGLALGQTVLSKACITAGIAFDGTQA HSALYDTERTAELFCEIVNRWKRLGGWPLPMGDEADLQS >gi|333596726|gb|GL892086.1| GENE 494 538925 - 539272 439 115 aa, chain - ## HITS:1 COG:ECs2363 KEGG:ns NR:ns ## COG: ECs2363 COG0278 # Protein_GI_number: 15831617 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 223 98.0 5e-59 MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRA ELPKYANWPTFPQLWVDGELVGGCDILIEMYQRGELQQLIKETAAKYKSEEPDAE >gi|333596726|gb|GL892086.1| GENE 495 539635 - 540369 601 244 aa, chain + ## HITS:1 COG:ECs2364 KEGG:ns NR:ns ## COG: ECs2364 COG0791 # Protein_GI_number: 15831618 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli O157:H7 # 1 244 9 271 271 291 67.0 9e-79 MTLCALLFTTLSLTPAANASEQARHSAVQKTHLAKSTERKKKTTSKTVKKKTTAQTKKTA SSKSKTLRSGTHKTTRKTASLVNEKCTVRKGHKTKCAKVTKLADVHKARMQKAQKTAMNK LMGQIGKPYRWGGTSPRTGFDCSGLVYYAYKDLVKFRIPRTANEMYHLRDAAPVNRGELQ NGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRSGQDIQITSLSEDYWVRHYVGARRVMTP KTIR >gi|333596726|gb|GL892086.1| GENE 496 540492 - 541073 466 193 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 193 1 199 201 184 44 2e-44 MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTDFEGKTLEEIVRSS DGGVFNNAAQVWNHTFYWHCLAPNAGGEPTGDLAAAINAAFGSFADFKAKFTDAAVKNFG SGWTWLVKEADGKLAIVSTSNAGTPLTTRATPLMTVDVWEHAYYIDYRNARPNYLEHFWA LVNWEFVAKNFAA >gi|333596726|gb|GL892086.1| GENE 497 541111 - 542277 1353 388 aa, chain - ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 387 1 387 389 528 90.0 1e-150 MKINFPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSISAAGMLISAYAIGVMVGAPLM TLLLSHRARRNALIFLMAIFTLGNVLSAISPDYTTLMLSRILTSLNHGAFFGLGSVVAAS VVPKHKQASAVATMFMGLTIANIGGVPAATWLGEAIGWRMSFLATAVLGVVAMVALFFSL PKGSAGERPEVRKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLHDITHATPLFVT AMLVLIGVGFSIGNYLGGKFADHSVSGTLKGFLTLLIVIMVAIPWLARNEVGAAIAMVVW GAATFAVVPPLQMRVMRVAHEAPGLSSSVNIGAFNLGNALGAAAGGAVISGGLGYSFVPV MGAIIAALGLLLVMMSGRKQPEAVCTAE >gi|333596726|gb|GL892086.1| GENE 498 542439 - 542528 99 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTDLKFSLFTTIVVLALIVAGGLTAALH >gi|333596726|gb|GL892086.1| GENE 499 542826 - 543851 1150 341 aa, chain + ## HITS:1 COG:ECs2367 KEGG:ns NR:ns ## COG: ECs2367 COG1609 # Protein_GI_number: 15831621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 676 94.0 0 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNIEKQRAYLSMMAQKRVDGLL VMCSEYPESVLSMLEEYRHIPMVVMDWGEARADFTDSVIDNAFEGGYMAGRYLVERGHRE IGVIPGPLERNTGAGRLAGFMKAMEEALITVPENWIVQGDFEPESGYRAMQQIVSQPHRP TAVFCGGDIMAMGALCAADELGLRVPQDISVIGYDNVRNARFFTPALTTIHQPKDSLGET AFNMLMDRIVNKREQSQSIEVHPRLIERRSVADGPFRDYRR >gi|333596726|gb|GL892086.1| GENE 500 543869 - 544780 915 303 aa, chain - ## HITS:1 COG:STM1429 KEGG:ns NR:ns ## COG: STM1429 COG0583 # Protein_GI_number: 16764777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 302 1 302 310 538 87.0 1e-153 MWSDYSLEVVDAVARNGSFTGAAQELHRVPSAISYTVRQLEAWLAVPLFERRHRDVELTP AGAWFLKEGRSVIKKMQITREQCQQIANGWRGHLSIAVDNIVKPERTRQMIVDFYRHFSD VELRVSQEVFNGVWDALADGRAEMAIGATQAIPVGGRYAFRDMGMLSWTCVVARDHPLAA LEGPLSDDTLRNWPSLVLEDTSRSLPKRITWLLDNQRRVVAPDWESSATCLSAGLCVGMV PVHFARPRIDVGEWVALTLENPFPDAACCLTWQQNDVSPAMAWLLDYLGDSETLNREWLR GPA >gi|333596726|gb|GL892086.1| GENE 501 544963 - 546078 1379 371 aa, chain + ## HITS:1 COG:ECs2369 KEGG:ns NR:ns ## COG: ECs2369 COG0477 # Protein_GI_number: 15831623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 358 24 382 403 507 81.0 1e-143 MYLPAFAAMQEDLQTPAAAISASLSLFLAGFAFAQLLWGPLSDRFGRKPVLLLGLAIFAV GCLGMLWVRDAAWLLALRFIQAVGVCAAAVTWQALVTDYYPASRTNRIFATIMPLVGLSP ALAPLLGSWILAHFDWQAIFATLFAITLVLMLPAFGLKPAHKKETHPDAKPITFTSLLRA KAYRGNVLIYAACSASFFAWLTGSPFILHDMGYSPAAIGLSYVPQTIAFLVGGYGCRAAL QKWDGQQMLPWLLVLYALSVIATWGVGFIPGAGLAEILIPFCVMAIANGAIYPIVVAQAL RPFPQATGRAAALQNTLQLGLCFLASLVVSALIATPLLTTTSVMLVTVALAGLGYRMQSS AHRAQTETSHA >gi|333596726|gb|GL892086.1| GENE 502 546377 - 547525 1134 382 aa, chain + ## HITS:1 COG:ECs2370 KEGG:ns NR:ns ## COG: ECs2370 COG2230 # Protein_GI_number: 15831624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 710 85.0 0 MSSSCIEEVSVPDDNWSRIVSELLGRAGITINGASPSDPQIKHPDFFKLVLQEGSLGLGE SYMDGWWECERLDMFFSSVLRAGLEKQLPRHFKDTLRIASARLFNLQSKKRAWIVGKEHY DLGNDLFSRMLDPLMQYSCGYWKKATTLEEAQQDKLQLICDKLQLQPGMRVLDIGCGWGG LAWFMAKHFGVSVVGVTISAEQQKMAQERCLGLDVDIRLQDYRDLNEQFDRIVSVGMFEH VGPKNYKTYFEVADRNLKPDGIFLLHTIGSKRTDNNVDPWINKYIFPNGCLPSVRQIANA SEPHFIVEDWHNFGADYDTTLMAWHERFQAAWPEIADNYSERFKRMFSYYLNACAGAFRA RDIQLWQVVFSRGIEHGLRVAR >gi|333596726|gb|GL892086.1| GENE 503 547557 - 548198 720 213 aa, chain - ## HITS:1 COG:ribC KEGG:ns NR:ns ## COG: ribC COG0307 # Protein_GI_number: 16129620 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Escherichia coli K12 # 1 206 1 206 213 374 90.0 1e-104 MFTGIVQGTAKVVSIDEKPNFRTHVVELPEYMLDGIETGASIAHNGCCLTVTEINGNQIS FDLMKETLRITNLGELVVGDIVNVERAAKFSDEIGGHLMSGHIMTTAEVAKIVTSENNRQ IWFKVQDPSLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLQRTTLGAKKLGQRV NIEIDPQTQAVVDTVERVLAAKEAAIIKAVEEE >gi|333596726|gb|GL892086.1| GENE 504 548436 - 549797 1460 453 aa, chain + ## HITS:1 COG:STM1425 KEGG:ns NR:ns ## COG: STM1425 COG0534 # Protein_GI_number: 16764773 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 3 453 7 457 457 748 90.0 0 MIEARQLLALAIPVIVAQVAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGL LLALTPVIAQLNGSGRRDRVAHQVRQGFWLAGSVSVLIMIVLWNAGYIIRAMHNIDPALA DKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFG MPELGGVGCGVATAAVYWVMFGCMITYIKHARSMRDIRNDTTFSAPDWTLMTRLFQLGLP IALALFFEVTLFAVVALLVSPLGIIDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGFRLG QGSTLDAQTAARTGLGVGVCMAVCTALFTVLLREHIALLYNDNPEVVTLASHLMLLAAIY QISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPCGYILALTDLVVDRMGPAGFWMG FIIGLTSAAIMMMLRMRFLQRQPSAVILQRAAR >gi|333596726|gb|GL892086.1| GENE 505 550348 - 550695 119 115 aa, chain + ## HITS:1 COG:AGpA535 KEGG:ns NR:ns ## COG: AGpA535 COG2801 # Protein_GI_number: 16119596 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 110 87 196 286 105 47.0 2e-23 MKRAGIKAQVGYRSPRARKGEASIVTPNRLQRQFNPDSPDERWVTDITCIRTHEGCLYLA VVVDLFSRKVIGWSMQPRMTKEIVLNALLMAVWRRNPQKQVRVHSDQGSQSDTTG >gi|333596726|gb|GL892086.1| GENE 506 550892 - 551476 210 194 aa, chain + ## HITS:1 COG:YPO2574 KEGG:ns NR:ns ## COG: YPO2574 COG3477 # Protein_GI_number: 16122790 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Yersinia pestis # 12 192 2 182 184 276 77.0 2e-74 MQLINKSLEIYAMTRSKVNLKILFWGTIIGGFMSSLIKSGTEANMPPRIAGEISPPAAHI DAWLGWAGINSHSLDYVYQGVTIPGAVMLYHWLFSFAFAFLYVLISAYWPKIRLWYGAAY GLIITIVMHGFLIPALGFRHPAYLNGEIGWLWNLNGYELWSEILGHICWSVSIEICLIAV LAYFARPIKGKWTI >gi|333596726|gb|GL892086.1| GENE 507 551821 - 552024 72 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDYSITHSYKNKDIIGPIIYLNILALFLTPHHIQIIDKPGTKQSFLSENQAESYLISQG QLPFTFP >gi|333596726|gb|GL892086.1| GENE 508 552145 - 553740 1071 531 aa, chain + ## HITS:1 COG:ydhS KEGG:ns NR:ns ## COG: ydhS COG4529 # Protein_GI_number: 16129624 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 528 1 533 534 734 64.0 0 MKKIAIIGSGPTGIYTFYSLLSNVAPLSITVFEKADQPGVGMPYSDEDNSRLMLANIASI EIPPVFITYLDWLKQQSPAHLARYNVDSEKLHDRQFLPRILLGEYFHDRFLAVVAEAKKA GFHVEVHPNAEVTDIKADADGVVFSVNDAPFSRRFDLAVVATGHVWPDEDEATRTWFPSP WSGLMDAKIRACEVGIMGTSLSGLDAAMAVVMQHGRFTDEQFVVNKGSEGLKITLMSRTG VLPEADFYCPIPYEPLSVLTESVAESEIAKGPDRLLDRIFALMVQELELADPHWCQSIAL NTLTADTLRDVWFEDRKKHGPFTWAEANLKEVERNKREKRTVAWRYTVLRLHEVVQAIVP SLNERDRERFKSGLERVFIDNYAAIPPQSIRRLLALREAGIISVVALGDDYDLDISSDQT VITTSEKRYRFDVFIDARGQKPLKNKDIPFPSLRKQLAETGDDVPDVGEDYTLLAPASLR GRIAFGAIPWLMHDHPFVQGLSECAEIGKAMAKAAGKPASAVRRKLPFMEF >gi|333596726|gb|GL892086.1| GENE 509 553767 - 554402 670 211 aa, chain - ## HITS:1 COG:ZcynT KEGG:ns NR:ns ## COG: ZcynT COG0288 # Protein_GI_number: 15800068 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli O157:H7 EDL933 # 1 208 1 208 219 281 64.0 4e-76 MQHIIEGFLSFQKEIFPQRKELFRSLASSQNPKALFISCSDSRLVPELVTQQEPGQLFVI RNAGNIVPPFGPEPGGVSATIEYAVVALGVTDIVICGHSNCGAMKAIADNADLEPMPAVS HWLRYSDAAKAVVEKKTWDKPIDKVNAMVQENVFAQLSNIKTHPSVAVGLRNNAIRLHGW VYDIESGKILALDKNTKSFVSLSENPEVFFE >gi|333596726|gb|GL892086.1| GENE 510 554475 - 555257 606 260 aa, chain - ## HITS:1 COG:no KEGG:ECL_02349 NR:ns ## KEGG: ECL_02349 # Name: not_defined # Def: beta-lactamase-like protein # Organism: E.cloacae # Pathway: not_defined # 1 260 1 260 260 470 84.0 1e-131 MITLCKTCGTAYDERPDNCPICDDERQYVPVTGQAWTDFDSLTATHTNKWQQLEPQLFSI KTVPSFAINQRALLLCTPQGNILWDCIANLDPATRALVNALGGICAIAISHPHYYTTMQE WAAAFNAPIYLHASDRHWVMRDSPAIRFWEGDALEIMPSVTLLRLGGHFAGGTVLHWQSG DGVLLAGDILQVTPGKDAVSFMWSYPNMLPLPARTVESVTSRLTGKTYQRLYGAFEGQNI SANADEIVQRSGQKYIACLR >gi|333596726|gb|GL892086.1| GENE 511 555383 - 555523 131 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEIDLDNLVFNGLDEAEERNAERLDDADKKAQAIVADDDCGDACKI >gi|333596726|gb|GL892086.1| GENE 512 555581 - 556987 1170 468 aa, chain - ## HITS:1 COG:no KEGG:ECL_02354 NR:ns ## KEGG: ECL_02354 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 468 1 468 468 862 85.0 0 MKRTVLTPALSATALLLAMQAAHAGPQAHVVCSYSHTLGDDAIMMYGMPNEAMLHDFFGN VHTDAYSSRESLRNQEKTTCDNKADSSAYWAPSLKLPDGTVVKPAYQKTYYQASNVDAWP LHPFPAGLSLLAGDHHGTAPNPHITFLCANGRGYTNKTGEVCGLRKANDAVQFNIGIQFP NCWDGVNLKPAHGLTNATYDTKGQCPSAFPVKIPTVNMNIAYVLPTISSLDTSKAQLSLD PIMHGSEREERWGSLYTAHADFMNGWTEDAARFMTDLCMNRGMDCGTTVPYGYSKAKANV WLSSMEPALSQPEPQVLLVQDNWQNGGRTKNSETLSLVKFHIPPLPAGQDPAQFKYRVRI YGGKVETNGADQIFFYPASNDWDPATVSWQSRPSCNYRSDAVLYLNHSREYRMVDVDKAV RKALAEGKTEISWYIGGDRQGNHYQFESASSPQSLILMLTGFSKTPEI >gi|333596726|gb|GL892086.1| GENE 513 557545 - 558375 953 276 aa, chain + ## HITS:1 COG:PA2204 KEGG:ns NR:ns ## COG: PA2204 COG0834 # Protein_GI_number: 15597400 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Pseudomonas aeruginosa # 20 273 11 264 268 268 54.0 1e-71 MAAKMKGFKKRAQVLGLVAAWGLVSAQAQADRLADIKAAGVVKVATFDANPPFGSIDAKT HEIVGYDVDFAKALAKSLGVKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDF STPYFVTGQQFLVPAKSPDKLDDYSRARIGAVKGTTGEQALHQRFPQSRVLSYDDIPLAL TALRNGNVQAITQDSTILAGLLAQAPDKADFKILPDLLSKEEIGVGVKKGETALLKAVND ELVNLEKNGQAANIYDVWFGPGTPAPQPRNFKIEAR >gi|333596726|gb|GL892086.1| GENE 514 558377 - 559192 581 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 262 2 242 245 228 48 8e-58 MLSGLFSHSAANAADFSRLEQASVEFRHVDKRYGDHPVLTDINLTIMPGEVVAILGPSGS GKSTLIRLINQLESLSGGEILVDHKPTGQLSGSRLRQLRSRVGFVFQQFNLYAHLTASQN ITLALEHVHGWKPLPAQARALALLEKVGMLEKAHRYPAELSGGQQQRVAIARALASSPQI ILFDEPTSALDPEMIGEVLFVMKTLAHSGITMIVVTHEMQFAREIADRIVFIDGGKILET APPSQFFNQPSHPRARRFLQKVLDPLHQEQL >gi|333596726|gb|GL892086.1| GENE 515 559192 - 559938 728 248 aa, chain + ## HITS:1 COG:YPO4110 KEGG:ns NR:ns ## COG: YPO4110 COG0765 # Protein_GI_number: 16124218 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 5 223 8 224 245 149 41.0 7e-36 MPALDWQGVLAGQPLHWILSGFLTTLWVTLAGIMLASLLALFFMLLRLSGGHIGTSIVSG WVSLFRNTPLLVQLLFWYFAAWNGLPQGLREAVNADHSGSILPGDVWWFTPEFLCSAWGL GVFTSAFLIEEAESGLRSVPAGQREAALAQGLSSWRLFRYILLPQGLANAWQPVVGQYLN LMKLSSLASGIGFAELTYQVRQIESYNAHALEAFTVGTVLYLLTGMVSGSVLVRLGPHSG RKNHDPRI >gi|333596726|gb|GL892086.1| GENE 516 559922 - 560608 649 228 aa, chain + ## HITS:1 COG:YPO4109 KEGG:ns NR:ns ## COG: YPO4109 COG0765 # Protein_GI_number: 16124217 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 5 217 3 215 251 159 45.0 3e-39 MIPGFNVIVENLDYLLWGRAAAGEPGGVLLSLLMAAGAAALALPGGIVLACVAWRYPGVV RSALFAWAELIRGIPLIFVIFWMWYLLPLITGRDLPGATTVTLALAWFTAAAVMHSVLAG LRALPSGQNEAALSQGFSTQQTLWRVLLPQALRNILPSLVGIFISLLKDTSLAFIVNVPE LTTVAGQVNNRVQIYPAAIFIFTGVIYYLLCCSLELLTKRWRVSQPAL >gi|333596726|gb|GL892086.1| GENE 517 560589 - 560798 381 69 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1774 NR:ns ## KEGG: Ent638_1774 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 69 1 69 69 112 91.0 7e-24 MGNVTKDEALYQEMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANQRVKRSELTTKAM ETVVKALAG >gi|333596726|gb|GL892086.1| GENE 518 560907 - 561719 1273 270 aa, chain - ## HITS:1 COG:SA0771 KEGG:ns NR:ns ## COG: SA0771 COG1464 # Protein_GI_number: 15926499 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Staphylococcus aureus N315 # 4 267 12 271 273 239 49.0 4e-63 MKKTLTLIAAATLSALSFASWADTLTVGASNTPHAEILEQAKPILAKQGIDLEIKPFQDY ILPNTALAGHDIDANYFQHIPYLNSVLKDHAGDKDYDFVSAGAIHIEPIGIYSKKYKSLK DLPEGGKIIMRDAVSEEGRILSIFEKEGVIKLKPGIDKVTARISDIVENPKKLQFTPNVE ASLLPQMYNNDEGAAVVINANYAIDAGLDPVHDPIAVESGENNPYANIITVHRGDEKKKD IVALVNVLHSKEIQDWIRTKYKGAVIPVNN >gi|333596726|gb|GL892086.1| GENE 519 561748 - 562416 758 222 aa, chain - ## HITS:1 COG:BH3480 KEGG:ns NR:ns ## COG: BH3480 COG2011 # Protein_GI_number: 15616042 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Bacillus halodurans # 5 222 1 218 218 262 66.0 4e-70 MAEELFPHLKWDQLWAATQETLYMTALSGVATFVLGIALGLALFLTARGGLFHNRTVYSV MSIVVNVFRSIPFIILIVLLIPFTKTVVGTILGVNAALPALIVGAAPFYARLVEIALREV DKGVIEATRSMGARLSTLVFRVLLPESSPALVSGMTVTLIALVSYSAMAGVIGAGGLGNL AYLEGFQRNHGDVTLVATVTILIIVFIIQFCGDVITSLLDKR >gi|333596726|gb|GL892086.1| GENE 520 562409 - 563431 975 340 aa, chain - ## HITS:1 COG:BS_yusC KEGG:ns NR:ns ## COG: BS_yusC COG1135 # Protein_GI_number: 16080327 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Bacillus subtilis # 1 337 1 338 341 385 57.0 1e-107 MIVLSNISKVFDNGKQALTAVDNVNLTIEQGQIYGIIGYSGAGKSTLIRLLNGLEKPSTG SVTINGQDISAAKGEALRQARLKISMVFQHFNLLWSRTVKENIAFSMQISGVPKAKIQAR VAELVELVGLKGRENAYPSQLSGGQKQRVGIARALANHPDVLLCDEATSALDPQTTDQIL DLLLDINRRFNLTIVLITHEMHVVRKICDRVAVMENGKVVEEGDVLSVFTHPQQPITRQF VRQVSQYAEEETFNTELANDLEGTVIRLTFTGHSTHRPIVGELTLRYGLPFNILHGKMTQ TAHGVFGQLWVHVVASEEQLNNILADLKQSDIEGEVIKHG >gi|333596726|gb|GL892086.1| GENE 521 563931 - 565352 1707 473 aa, chain + ## HITS:1 COG:STM1378 KEGG:ns NR:ns ## COG: STM1378 COG0469 # Protein_GI_number: 16764728 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Salmonella typhimurium LT2 # 1 473 1 470 470 853 97.0 0 MKKTKIVCTIGPKTESEEMLTKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKK AAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVG NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIF GCEQGVDFVAASFIRKRSDVVEIREHLKAHGGENIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCVRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMKSRLDYNNDSRKLRITEAVCR GAVETAEKLEAPLIVVATQGGKSARAVRKYFPDATILALTTNETTARQLVLSKGVIPHLV KEIASTDDFYRLGKEVALELVNCGLAQKGDVVVMVSGALVPSGTTNTASVHVL >gi|333596726|gb|GL892086.1| GENE 522 565665 - 565901 351 78 aa, chain + ## HITS:1 COG:STM1377 KEGG:ns NR:ns ## COG: STM1377 COG4238 # Protein_GI_number: 16764727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Salmonella typhimurium LT2 # 1 78 1 78 78 105 100.0 3e-23 MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD DAARANQRLDNQATKYRK >gi|333596726|gb|GL892086.1| GENE 523 565962 - 566975 815 337 aa, chain - ## HITS:1 COG:ECs2385 KEGG:ns NR:ns ## COG: ECs2385 COG1376 # Protein_GI_number: 15831639 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 320 1 321 334 442 74.0 1e-124 MKRASLITLLLLGSLSAVNSARAVDYPLPPAGSRLIGQNQTYTIQEGDNKLQSIARRFNT AAQLILETNNTIAPVNPAPGTVITIPSQMLLPDTEREGIVVNLAELRLYFYPPGENIVQV YPLGIGQLGLETPVSTTRVSQKIPNPTWTPTAGIRARSLAQGIKLPPVVPAGPNNPLGRY ALRLGIGNGEYLIHGTSAPDSVGLRVSSGCMRMNAPDIKALFEHVRVGTRVQIINEPVKF SVEPDGKRYIEVHRPLAQAEGENPQTVPFTHSAAFTAFAAESGSDKTLIDKALTRRAGIP VAVSAGKGLSASNSVQSVQNSRVSAAVTEGEEEKVLQ >gi|333596726|gb|GL892086.1| GENE 524 567073 - 567489 507 138 aa, chain - ## HITS:1 COG:STM1374 KEGG:ns NR:ns ## COG: STM1374 COG2166 # Protein_GI_number: 16764724 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Salmonella typhimurium LT2 # 1 138 1 138 138 225 80.0 2e-59 MADLPDRDKLLRNFGRCANWEEKYLYIIELGQRLPPLSEEAHNPDNIIQGCQSQVWIQMQ QTEEGVIELQGDSDAAIVKGLIAVVFILYHRMSAQDIVAFDVRPWFEKMALTQHLTPSRS QGLEAMIRAIRAKAAILS >gi|333596726|gb|GL892086.1| GENE 525 567504 - 568724 1476 406 aa, chain - ## HITS:1 COG:ECs2387 KEGG:ns NR:ns ## COG: ECs2387 COG0520 # Protein_GI_number: 15831641 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 702 83.0 0 MTFPVEKVRADFPVLTREVNGLPLAYLDSAASAQKPNQVVDAEAEFYRRGYAAVHRGIHT LSAEATQRMENVRTQVAAFLNARSPEELVFVRGTTEGINLVANSWGNAQVHAGDNIIITQ MEHHANIVPWQMLCERVGAQLRVIPLNDDGTLQLEKLDALLDNRTRLVAVTHVSNVLGTE NPVALIVDKAHQAGAKVLIDGAQAVMHHAVDVQALDCDFYVFSGHKLYGPTGIGVLYVKE DILQAMPPWEGGGSMIATVSLTEGTTYARAPWRFEAGTPNTGGIIGLGAAISYVSETGLA AIQEYEQQLMQYALQELASVPDLTLYGPADRLGVIAFNLGKHHAYDVGSFLDNYGVAVRT GHHCAMPLMAYYQVPAMCRASLVMYNTTEEVDRLVAGLKRIHQLLG >gi|333596726|gb|GL892086.1| GENE 526 568721 - 569992 1388 423 aa, chain - ## HITS:1 COG:ynhC KEGG:ns NR:ns ## COG: ynhC COG0719 # Protein_GI_number: 16129637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 421 1 421 423 681 82.0 0 MAGLPNSSNALQQWHRLFETQGQSRSEQAQHHLQQMLRLGLPTRKHENWKYTPLDGLLNG EFVTRLAQVSPGQRDALALSVDAVRLVFVDGQFRAELSDSVQESGFDIAINDERQSLTAP VQPEVFLHLTESLSQSVTHIRVKRNQRPAKPLLLMHITQGVEGDEINTAHYRHHLELAEG AEATVIEHYVSLNDIRHFTGSRLTMNVAANAQLHHIKLAFENPLSHHFAHNDILLGQDAA AYSHSFLLGGAVLRHNTSTQLNGENTTLRINSLAMPVKAEVCDTRTWLEHNKGYCNSRQL HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLLGRLAEVDTKPQLEIYADDVKCSH GATVGRIDDEQMFYLRSRGIDQQAAQKMIIYAFAAELTEALSDGGLKQQVLARIGQRLPG GEA >gi|333596726|gb|GL892086.1| GENE 527 569967 - 570713 988 248 aa, chain - ## HITS:1 COG:ynhD KEGG:ns NR:ns ## COG: ynhD COG0396 # Protein_GI_number: 16129638 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Escherichia coli K12 # 1 248 1 248 248 456 92.0 1e-128 MLSIKDLQVSVEEKAILRGLNFDVKPGEVHAIMGPNGSGKSTLSATLAGREDYEVTSGSV EFNGKDLLEMSPEERAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRKYRGLEALDRFDF QDLMEEKIKLLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPALCILDETDSGLDIDA LKIVADGVNSLRDGNRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQG YGWLTEQQ >gi|333596726|gb|GL892086.1| GENE 528 570723 - 572213 1823 496 aa, chain - ## HITS:1 COG:ynhE KEGG:ns NR:ns ## COG: ynhE COG0719 # Protein_GI_number: 16129639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 496 14 508 508 975 95.0 0 MSRNTEATSDVNTWGGGHLNYKEGFFTQLQTDELAKGINEDVIRAISAKRNEPEWMLAFR LSAFHAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGSCDDTCASQPGAVQQTGAENSFL SKEVEEAFNQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPEL VKKYIGTVVPSNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTI LVADEGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQNWFPGDGNTGGILN FVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGT KMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGADCGAHTF PYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFA VEAQKLLAISLEHSVG >gi|333596726|gb|GL892086.1| GENE 529 572222 - 572590 344 122 aa, chain - ## HITS:1 COG:ECs2391 KEGG:ns NR:ns ## COG: ECs2391 COG0316 # Protein_GI_number: 15831645 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 221 83.0 2e-58 MELHSETFNPADFAWRGLTLTPAAAAHIHELVAKNPDILGVRLGVKQTGCAGFGYVLDTV TEPEKDDLVFETDGAKLYVALQAMPFIDGTEVDYVREGLNQLFKFHNPKAQNECGCGESF GV >gi|333596726|gb|GL892086.1| GENE 530 572579 - 572794 92 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295096077|emb|CBK85167.1| ## NR: gi|295096077|emb|CBK85167.1| hypothetical protein ENC_13710 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 18 71 1 54 71 111 96.0 2e-23 MQFHRSTSSDKPPGHNTMLVITIITSTPCEQGLWAKPPFLATFIKHRPCDGMRMGGLNLF NALINNAFNKK >gi|333596726|gb|GL892086.1| GENE 531 572912 - 573640 674 242 aa, chain - ## HITS:1 COG:ycgE KEGG:ns NR:ns ## COG: ycgE COG0789 # Protein_GI_number: 16129125 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 243 320 65.0 1e-87 MAYYSIGEVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRQFDDEDILRIEEIKRLMKTG VSVGKVKALLENTEVMTQGNWASFQEEMLTVLRYANPAKLRAKIGEFRRDHAMDVLIDNI ITPVRQRMNQDQNTVRHMASLLDGVLIEFAVTSLVESRKKAGKDALLVGWECDDRTHLWL EAARLAYKGWHIDVLAEPIDSPRPELFPGQKIFVWTGKAPTPRQQEQLDHWREQGFAVSF HH >gi|333596726|gb|GL892086.1| GENE 532 573829 - 575049 1158 406 aa, chain - ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 174 403 14 243 243 297 63.0 2e-80 MLTTIIYRSHICDDVPVKALEDMVAAANCRNRQSDVTGILLFNGTHFFQLLEGPAENVKE IYQLICRDPRHHNVVELLSDHGPSRRFGNVGMELFDLRQYDTDEVLQQVLDKGTTRYQLT YNDRALQFFRTFVEATEKANYFELPPADAWEFVTENTPLSSQPTVVAKGADCSFAFQPIV DPFMQQVVSWEALIRTPSGESPEKYFANLPREALYESDLKSKQVALSMASALGLQTQTLS INLLPMTLVNVPGAVDFLLTAIEANGFVPEQIVVEFTESEAISRFEEFTSAVRQLKSAGI SVAIDHFGAGFAGLQLLAQFQPDRIKINRDLIANVHKSGPRQAIVQAIIKCCASLEILFC AVGVELAEEWMWLESAGISQFQGHLFASPRLGGIPAIAWPEKKFDF >gi|333596726|gb|GL892086.1| GENE 533 575436 - 575675 269 79 aa, chain + ## HITS:1 COG:no KEGG:ECL_02373 NR:ns ## KEGG: ECL_02373 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 79 1 79 79 133 91.0 2e-30 MQQNGHLADSSTAIAQYFEKAALPTQQETLGQVVVEILSDGRNLNRKSLCTKLLSRLEKA NGPEEEHHYHMLLGLLFER >gi|333596726|gb|GL892086.1| GENE 534 576030 - 576308 279 92 aa, chain + ## HITS:1 COG:no KEGG:ECL_02374 NR:ns ## KEGG: ECL_02374 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 92 1 92 92 171 95.0 7e-42 MRQNIQLQPEYHSAFLDSALSEYFRHAGDRFAEESAIFSTAVRCVLASEGHLTNKAIILW LIQTLESTDDVVKADVIRKTLEIVVGYTMDDL >gi|333596726|gb|GL892086.1| GENE 535 576406 - 577065 280 219 aa, chain - ## HITS:1 COG:no KEGG:ECL_02377 NR:ns ## KEGG: ECL_02377 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 208 1 208 214 278 67.0 2e-73 MLNILIQETDLFFQAGLQHFFEDFFKHNFHRSITFHLGLTNENVSQADIIVLSLCQGETL TCFPELLARQKGIVIGLVDDEQRFSALSSCYQDIVFIPRRASLDRISGLLFIAWYATQLP GYTWNKKTCFDCQHKGLSRQQMRIMVNFYRGLSVVQTANALKMSEKTVFTHKYMMMQKFN LRSDYELIVLLRRLMAKKSRPNLLRDYLENNYAEHIQCA >gi|333596726|gb|GL892086.1| GENE 536 577107 - 577619 271 170 aa, chain - ## HITS:1 COG:ydeR KEGG:ns NR:ns ## COG: ydeR COG3539 # Protein_GI_number: 16129462 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 12 163 15 160 167 79 34.0 4e-15 MKIRCRILLLLALFSGKGFSADSVSIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMAT PGSTSDPVPFSLLFTQCPTGTQSVTVSFTGSPDPVAGADYFMNSGSATHVAIAMRDAQTG ALKGTGSSMTQTIAADRTATMAMQASVKSIAGGATPGSISAVVVMTMQYN >gi|333596726|gb|GL892086.1| GENE 537 577631 - 578560 650 309 aa, chain - ## HITS:1 COG:no KEGG:ECL_02379 NR:ns ## KEGG: ECL_02379 # Name: not_defined # Def: putative fimbrial protein # Organism: E.cloacae # Pathway: not_defined # 9 309 15 315 315 423 86.0 1e-117 MLLLCLLAAGNMARAGTCTTITPQLSTLSVGTINVQRDAPVGTVVFSGAASATGSYLTGC TNPLMLGFSMRYNSATLSSYGNHVYNTNVSGIGIRFSSNNYFENPSNTFSYNAQTSYVDW YGGRIELVVTGPVSSGALTPGVIGVVTLQGSDGLYRDGLTTQLTSGTINALACTVNTSQL TFPIGDIPVSAFGTVVGTTPTGAQNTQNLGLTCAAGTNISVSLSGIQNPDSANTSVMALT GQGNAGTAKGVGVQLIYNGAPLVMNSRLFLRQSAGGQETLPLTARYYQTLSRVESGSANA SATLNLTYQ >gi|333596726|gb|GL892086.1| GENE 538 578580 - 581123 2216 847 aa, chain - ## HITS:1 COG:STM4593 KEGG:ns NR:ns ## COG: STM4593 COG3188 # Protein_GI_number: 16767834 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 5 844 3 845 845 779 47.0 0 MTTAFNTMQPAPLAIFIAFALAGVSPALYATETFNTELVELDNPGMGKADLSAFESGSQA PGTYHVDIILDDRLLETRDIRFMAVKDANGGETLRPCLSIGQLNAWGVKTALFPQLAAEQ GECADLKAIPQASADFQFGAQRLAISIPQAAIDLPARGYVPPDMWDEGITAAMLNYSLSG ANSRARSGAGSRSDSQYANLRPGINVGPWRLRNYTTWSRDASGQDKWDNVYTWMQRAIIP LQAQLTLGDSSAPADVFDSMPFRGVQLASDDDMLPDSLKGYAPVVRGIARTNAQVVVRQN SYQIYQSYVAPGAFEIADMYPTGGAGDLDVTIVEADGSEQHFTLPYASLPVLQREGRLKY ALTAGQYRAYNRSVEKTPFGQLTGIYGFRHGITLYGGVQGADKYQSAALGMGKNMGDLGA ISADVTQGWSTPEHAAKTSGQSWRARYSKNFINTGTNFSIAGYRYSTRGYYGMQDVLDSY GDSSALQDRRRNRAELTMSQTLGGNLGALTLSAAREDYWNDGKSMASWSVGYSNYWHNIS YGLTWTYSKNVRSGSEMRDSQKNADHDQLLALNVSIPLDKFLPQTWANYGMNASRNNGTT HNVGLNGVALENRALNWNVQQGYGTEGVGYTGNVNADYRGTYGEFTAGYGYDKNSERLNY GLQGGILAHADGITLSQPLGETNVLIKAPGAHGVDIRNQPGVRTDFRGYTVVSNLSVYRK NDLTLDPENMPDDVELEINTRTVTPTRGAVVRADYLPKSGRRVLMTLTDNDRAVPFGAVV TLVGDDSGSFIVGDRGQVYLTGMREQGTLVATWGSQSSQQCRADFTLPKHSTFGGIADMR ATCRQER >gi|333596726|gb|GL892086.1| GENE 539 581151 - 581828 331 225 aa, chain - ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 22 224 21 226 227 197 50.0 1e-50 MRFIMTTGLAMALLPLTLTSASAGVIIGGTRIIFDGAKKEASISITNPDNVPYLIQSWID VKDEQSGKVPFIITPPLYRLDGGQKNLERIVMTGSLPQGQESLFWLNIKAIPSASKQMNS LQIAVKTRIKLIYRPEGLRASTPEDQANKLTWRRAGNTLQVNNPTPYVINFNEITLGDKK LNDVTYVMPSGSASFPLPNGASGNALTFKVINDYGSPGELHRASL >gi|333596726|gb|GL892086.1| GENE 540 581885 - 582415 647 176 aa, chain - ## HITS:1 COG:STM0025 KEGG:ns NR:ns ## COG: STM0025 COG3539 # Protein_GI_number: 16763415 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 25 175 27 180 181 94 37.0 1e-19 MNKKLMMAMLAASSVLTMTNAFAAAGTVNFNGNILDSACDVDVASQNQVVVLGDYYKTEF PTTGARTAATQFNIILKNCPVTVTNAKVRFDGTPDLTNASLLAIDASVAGAATGVAINLM TADKADLPLHGSNSYTYALSSTADNTLNFYAQYISTAASVTAGPANSVANFSVVYN >gi|333596726|gb|GL892086.1| GENE 541 582770 - 583429 452 219 aa, chain + ## HITS:1 COG:no KEGG:KPK_2637 NR:ns ## KEGG: KPK_2637 # Name: not_defined # Def: cyclic nucleotide-binding domain protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 219 5 223 223 357 82.0 2e-97 MNTRFVPESEIDKSTALGAKPFKHIEKLIDNVVPHAERHIIAKGEVIHYYAGDIRQCFLL LHGSVALHRRGDGIVLNSESAPFILGVSSQFSSEHLYVRALETSEVASVSLACFNRVVAQ QNLWEHFSNLLIYTASRVYEHCAQISQMSAYDIIRFQLVELMQEPEAIRQNITAAAYIKS RTYLSRSGIMRILAELRTGKYITMERGVLLEIHHLPRKY >gi|333596726|gb|GL892086.1| GENE 542 583507 - 584136 464 209 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2593 NR:ns ## KEGG: Kvar_2593 # Name: not_defined # Def: Crp/Fnr family transcriptional regulator # Organism: K.variicola # Pathway: not_defined # 1 209 1 209 209 335 76.0 9e-91 MSSDKPSHRGSPYAQELISHLQPHCATHKTDPGEQLDLQVNGQSMCYLILEGTVAIYRRS DDMMLSTARSPALFGLANLTDIYFTDYLRTVTPCLIGVLTTDRVAEIIKENALWGLLSNH LMFVYNRLYHNVMPKGAPTAYEMIRHQLVLLMQEDDSYRRSVTAERYIRDKTQLSRSGVM RILADLKTGGFIEMEEGRLIKINKLPARY >gi|333596726|gb|GL892086.1| GENE 543 584183 - 584377 307 64 aa, chain - ## HITS:1 COG:no KEGG:ECL_02385 NR:ns ## KEGG: ECL_02385 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 64 1 64 64 112 98.0 7e-24 MDTEITPTQLAIEYLRRDKSNLSPAQYLKKLKQLELEFTDLLALSSNELKEEIYFAWRLG VHVH >gi|333596726|gb|GL892086.1| GENE 544 584463 - 584873 310 136 aa, chain - ## HITS:1 COG:STM1366 KEGG:ns NR:ns ## COG: STM1366 COG2050 # Protein_GI_number: 16764716 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Salmonella typhimurium LT2 # 1 136 1 136 136 229 83.0 8e-61 MIWKRAVTLEALNAMGAENMVGLLDIQFTRIGDDELEATMPVDRRTHQPFGLLHGGASVV LAETLGSVAGYLCTEGEQKVVGLEVNANHIRSVRSGRVRGICRALHAGSRHQVWQIEILD EQDSLCCSSRLTTAVV >gi|333596726|gb|GL892086.1| GENE 545 584870 - 587926 3327 1018 aa, chain - ## HITS:1 COG:ZydiJ_1 KEGG:ns NR:ns ## COG: ZydiJ_1 COG0277 # Protein_GI_number: 15802099 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 542 1 542 542 1038 89.0 0 MIPQISQAPGVVQLVLNFLQALEQQGFTGDTATDYADRLTMATDNSIYQLLPDAVVFPRS TADVALIARLASQDRFSSLVFTPRGGGTGTNGQALNQGIIIDMSRYMNRIIEINPEEGWV RVEAGVIKDQLNQFLKPYGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVMGV RAVLLGGDILDTQPMPVELAETLAKESTTSGRIYRTVLERCRENRELILDKFPKLNRFLT GYDLRHVFNDDLSQFDLTRVLTGSEGTLAFITEARLDITRLPKVRRLVNVKYNSFDSALR NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDAEL IESQVSTLCQRLDELIAQGEGGVIGWQLCNDLSGIERIYAMRKKAVGLLGNAKGAAKPIP FAEDTCVPPEHLADYIVEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKE ISDEVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEQLYAELRKVKAAFDPDNRLNPGKIC PPEGVDAPMLQVDAVKRGTYDRQIPIAVRASWRGAMECNGNGLCFNFDVKSPMCPSMKIT SNRIHSPKGRATLVREWLRLLADRGIDPLKLEQELPEKRASLRRLIERTRNSWHANKGEY DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPMRDHLVATVESYA PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSTPSLQRRLVGHRSANMTLEQLEAL SPEQKAKVVLVVQDPFTSYYDAQVVADFVRLAEKIGYQPVVLPFSPNGKAQHIKGFLTRF AKTAQKTSDFLNRVAQLGMPMVGVDPALVLCYRDEYKQTLGDKRGDFQVLLVHEWLPAVL TQTAPQEVSGESWYLFGHCTEVTALPTAPAQWASIFARFGAKLESVNVGCCGMAGTYGHE AKNHANSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGNGVRHPLQALLEIMG >gi|333596726|gb|GL892086.1| GENE 546 588126 - 589241 1206 371 aa, chain + ## HITS:1 COG:STM1364 KEGG:ns NR:ns ## COG: STM1364 COG0628 # Protein_GI_number: 16764714 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 371 1 371 372 525 83.0 1e-149 MVNLRQPRDVAQILLSVLFLAIMIIACLWIVRPFVLGFAWAATVVVATWPLLLRLQKLLF GRRGLAVLVMTLLLFLLFIIPIALLVNSLVDSSGPVIRAVTSGDMTLPDLAWLNSIPVVG AKLYSGWHSLLEMGGSALMAKVRPYIGTTTTWFVGQAAHIGRFMMHCALMLVFSALLYWR GEQVALGIRHFATRLAGKRGDAAVLLAAQAVRAVALGVVVTALVQAVLGGIGLAISGVPY ATIFTVIMLMTCLAQLGPLLVLVPCIIWLYWTGDTTWGTVLLVWSCVVGTMDNVIRPLLI RMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHEVPPPGTDPDVILS ELEELEDKNAQ >gi|333596726|gb|GL892086.1| GENE 547 589564 - 591939 2498 791 aa, chain - ## HITS:1 COG:TM0076 KEGG:ns NR:ns ## COG: TM0076 COG1472 # Protein_GI_number: 15642851 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 4 778 3 767 778 615 40.0 1e-175 MTAIYKDAGRPVHERVADLLARMSPEEKFAQMHAYWLILDENGNHRERSDLSDEFAGVSE QASLSERLKLGVGQITRPLGTHIVDAKTGVRAANRLQRMMMEETRLGIPALFHEECLVGL LCKDATLFPSSLNYGSTWDPALVQRAAEQIGKEARSVGCQQGLAPVLDVSRDVRWGRTEE TFGEDPWLVGVMATAYVKGLQGDKRDLLATLKHYVGHSFSEGARNHAPVHLGFSELNDTF LLPFEMAVKLANAGSVMPAYHDIDNQPGHSDHFLLTTVLREQWGFDGIIVADYGGVSLLH QHHGVSHDPAESAALAFNAGLDVELPKDDCARHLAEAVERGLISMAKVDEIVARVLSEKF RLGLFEKPYADEDSIDLQNEATRQVAREVATKSITLLENNGILPLNGKPRVAVVGPTADD PLALLSGYSFPVHLIISDMVEETSQVTTPRAALEQYLGASQIRYAKGCHIIEKRMAGAPV FPGDSGGKPMQQSPVSQRTDLIPDAVSAAQESDVVVACVGDLAGLFQSGTVGEGSDTDSL DLPGVQQQLLEALVATGKPVIVVMTGGRPYNLQGLEDKVAALMLAWAPGQEGGWAIADVL TGRAEPQGRLVVSVPKSAGAMPYYYNHKLKSGGTPFAFHFGALYPFGYGLGWTQFSWGAA RLAESRVPVGGEVVLNVDITNTGERSGSEVVQVYVRDKVATQVRPLQELKAFQRVTLSPG ETATLTFTLPVEMFNFTRRDGKRIVEPGEFELQVGASSADIREAVTVQVTGETRVLAGEW RMLSRCDMTRA >gi|333596726|gb|GL892086.1| GENE 548 591943 - 593343 1598 466 aa, chain - ## HITS:1 COG:yagG KEGG:ns NR:ns ## COG: yagG COG2211 # Protein_GI_number: 16128255 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 7 453 4 450 460 495 56.0 1e-140 MTISSVLRTKDKIGYGLGDMASALVWQTATLFLAYFYTDVFGLPAAIMGTMFLVVRVVDA FVDPCIGALVDRTQTRHGRFRPWLLWFAIPFGVSCLITFYVPDAGATAKIVYACVTYAIL SLIYSAINVPYCAMPGALTLDPRERHSLQSWRFGLSFIGGLIVTVIALPLVSLLGQGNVQ KGYFYAMSLMGLLGIVLFFCCFFMTRERYSPRNDTSGSMLTDLKLLAGNSQWRIVFLFNI LLLTAVVTRGSATMYYVNYVLLRPELVFAFIVSGMVASLSGALLSERLLGKFDRVRAYQW TIISFVIFGALIFFIPPSQVWLIFGLNIVFSFIQNLTTPLQWTMFSDVVDYEEHRSGRRL DGLVFSTALFAIKFGLALGGAVVGWVLGMVDYAPGQANQAPHVLATINALFTLIPCVLFL CMVALLAIYKLNSRLVDTIARELASKRDIRNDAGQLSPATQSAIQE >gi|333596726|gb|GL892086.1| GENE 549 593579 - 595957 3326 792 aa, chain - ## HITS:1 COG:ppsA KEGG:ns NR:ns ## COG: ppsA COG0574 # Protein_GI_number: 16129658 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Escherichia coli K12 # 1 792 1 792 792 1540 94.0 0 MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNLFL DQSGVNQRIYDLLDKTDIDDVTELAKAGAQIRQWIIDTPFQPELEKAIHDAYNQLSADDA QASFAVRSSATAEDMPDASFAGQQETFLNVQGYEAVLVAVKHVFASLFNDRAISYRVHQG YDHRGVALSAGVQRMVRSDVGSSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDE FYVHKPTLAANRPAVVRRTMGSKKIRMIYAPTQEHGKQVTIEDVPQEQRDRFSLTDAEVE ELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHAQGKIVA EGRAIGHRIGAGPVKVIHDISEMNRIQPGDVLVTDMTDPDWEPIMKKAAAIVTNRGGRTC HAAIIARELGIPAVVGCGDATERMKDDQNVTVSCAEGDTGYVYADILDFSVKSSSVDTMP DLPLKIMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQDAKLQNE IREMMKGYDSPKEFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPEE ENPMLGFRGAGRYVSESFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVDE LARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLALGLDRDSGVVS ELFDERNEAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMDEGIDSLSLNPDTV VQTWLSLAELNK >gi|333596726|gb|GL892086.1| GENE 550 596293 - 597126 1046 277 aa, chain + ## HITS:1 COG:ECs2410 KEGG:ns NR:ns ## COG: ECs2410 COG1806 # Protein_GI_number: 15831664 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 530 94.0 1e-150 MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVSINSITLPFVENESRAKAVKDQIDAIY QQTGVRPLVFYSIVIPEIRNIILQSEGFCQDIVQALVAPLQGELKLDPTPIAHRTHGLNP GNLTKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAAN YPFIADDMDNLVLPAALKPLQHKLFGLTINPERLAAIREERRENSRYASMRQCRMEVSEV EALYRKNQIPWLNSTNYSVEEIATKILDIMGLNRRMY >gi|333596726|gb|GL892086.1| GENE 551 597160 - 597378 112 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVRHLGGNGVQPGQFSRCDQAINARGAQFVGFVHGMSQKFFASSADYREVMGITLNQSLL ISSSGHVAPRMA >gi|333596726|gb|GL892086.1| GENE 552 597277 - 598323 1034 348 aa, chain + ## HITS:1 COG:ECs2411 KEGG:ns NR:ns ## COG: ECs2411 COG0722 # Protein_GI_number: 15831665 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 649 87.0 0 MNKTDELRTARIDSLVTPAELARLHPVSAEVADHVTASRRRIEKILNGEDKRLLVVIGPC SIHDLDAAMDYAKRLQTLREKYQDRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH GIALARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC PVGFKNGTDGNTRIAVDAIRASRASHMFLSPDKNGQMTIYQTSGNPFGHIIMRGGKKPNY HADDIAAACETLAEFDLPEHLVVDFSHGNCQKQHRRQLDVCEEVCQQIRSGSTAISGIMA ESFIKEGTQKIVAGQQMVYGQSITDPCLSWEDSELLLEKLAAAVDSRF >gi|333596726|gb|GL892086.1| GENE 553 598521 - 598709 142 62 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1742 NR:ns ## KEGG: Ent638_1742 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 62 1 62 62 81 77.0 1e-14 MSPTDNSTATPTKTHTAPSPAPTDRRIDSKSLLGDEGRVIIVHDGQHYLLRQTNAGKLIL TK >gi|333596726|gb|GL892086.1| GENE 554 598785 - 600767 2406 660 aa, chain + ## HITS:1 COG:ECs4380 KEGG:ns NR:ns ## COG: ECs4380 COG1629 # Protein_GI_number: 15833634 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 18 660 18 660 660 1065 82.0 0 MPHLQSASLRPSLLALAIVSTLPGVTFAAADEITVTATGNARSAFEAPMMVSVIDATAPE NQTTSSAADMLRKVPGLMLDGTGRTNGQDVNLRGYDRRGVLVLVDGVRQGTDTGHLNSTF LDPALIKRIEVVRGPSALLYGSGALGGVISYDTVDASDLLDAGKNSGYRVFATGATGDHS IGMGASAYGRTDTLDGLVSWSSRDRGDIRQSDGARAPNDESINNMLAKGSWKIDPAQTLS GSLRYYNNDAQEPKNPQTTDASSSNPITDRSTIQRDAQLGYRIAPAGNDWLNADAKIYWS EARINAQNINASGEFRKQTTKGGKVENRTRLFSDAFASHLLTYGGEYYRQEQHPGGATTG FPDAKIDFSSGWLQDEITLRDLPVTLLGGTRYDNYRGSSDGYDDVDADKWSSRAGLTVSP TDWLMLFGSYAQAFRAPTMGEMYNDAKHFSIGSFYTNYWVPNPNLRPETNETQEFGFGLR FDDLLLANDALEFKASYFDTNAKDYISTTVDFAAATTMSYNVPNAKIWGWDMMATYATSL FNLDVAYNRTRGKDTDTGEYISSINPDTVTSKLDIPVAQSGFSVGWIGTFVERSTHISSS YSEQPGYAVNDLYVSYKGQQQLKGITTTLMLGNAFDKAYWSPQGIPQDGRNGKIFVSYQW >gi|333596726|gb|GL892086.1| GENE 555 600803 - 601831 1020 342 aa, chain + ## HITS:1 COG:ECs4379 KEGG:ns NR:ns ## COG: ECs4379 COG3720 # Protein_GI_number: 15833633 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme degradation protein # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 575 80.0 1e-164 MGHYTRWLELREQHPGKYARDIAGLMHISEAELAFARVGHDAWRLRGEIREILAALESVG ETKCICRNDYAVHEQVGAFTHQHLGGHAGLVLNPRALDLRLFLNQWASAFHMSETTSRGE RQSIQFFDHQGDAVLKVYTTDRTDVAAWGDVLTRFIIADNPALALKAVDAPAHSDGADAG SVEKEWRAMTDVHQFFSLLKRHNLSRQQAFRLVSDDLACKVDNSALAQLLETARQDGNEI MIFVGNRGCVQIFTGVVEKLTPMKGWLNIFNATFTLHLLEETIAETWVTRKPTADGHVTS LELFAADGTQIAQLYGQRTEGEPEQSQWRRQIDALTPEGLAA >gi|333596726|gb|GL892086.1| GENE 556 601828 - 602646 815 272 aa, chain + ## HITS:1 COG:YPO0281 KEGG:ns NR:ns ## COG: YPO0281 COG4558 # Protein_GI_number: 16120620 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Yersinia pestis # 8 271 14 278 279 279 59.0 3e-75 MKNWFALLCALPLVAVAAPERIVALGGDVTEIVYALGAESSLVARDSTSRWPQATDALPD VGYLRQLNAEGILSVRPTLVLASDQAQPSLALKQIEQSHVRVVTVPGTPDLRAIDEKVRV IAQATHHEAQGETLRSSLRQALAALPSSPLNKRVLFILSHGGMTAMAAGQQTGADAAIRA AGLQNAMQGFTRYQPLSQEGVMASQPDLVVISQDGLNALGGEENLWKLPGLAQTPAGRRK QVLAIDDMALLGFSVRTPKAIQQLRARAEQLP >gi|333596726|gb|GL892086.1| GENE 557 602709 - 603638 1054 309 aa, chain + ## HITS:1 COG:YPO0280 KEGG:ns NR:ns ## COG: YPO0280 COG0609 # Protein_GI_number: 16120619 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 2 307 25 331 334 318 64.0 7e-87 MATGFGALRLPVNVLWSGSDETLRQIWLTIRLPRVLLALVIGGSLALAGCVMQGLFRNPL ADPGLLGISSGAALAVALWVVLPLSLPALVMLYAPMLAAFLGALAATGVIFLLSKQRDTS LSRLLLVGIAINALCGAAVGVLSWVSNDAQLRQLSLWGMGSLGQAQWSTLLAVTSLMVPA VLAIWRCTSALNLLQLGEEEAHYLGVDVALVQRILLLCSALLVAAAVAVSGVIGFVGLVV PHLVRMWLGADHRATLPGTILAGALLLLVADTVARTLVAPAEMPVGLLTSILGAPWFLWL IFRRGEQHG >gi|333596726|gb|GL892086.1| GENE 558 603631 - 604410 659 259 aa, chain + ## HITS:1 COG:YPO0279 KEGG:ns NR:ns ## COG: YPO0279 COG4559 # Protein_GI_number: 16120618 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, ATPase component # Organism: Yersinia pestis # 7 257 14 264 266 270 57.0 1e-72 MAERYTAENLTFTRSGRTLTDNVSLSLSQGELVTLIGPNGAGKSTLLRLLTGYLKPDSGG CSLAGKALSEWHPETLSRYRAVMRQHSQPGFDWLVEEIVGMGRAPWTRQPEPSIVREVMH LTGCLPLAGRSWHALSGGEQQRVQLARALAQLWRDGTPRGWLFLDEPTSALDLYHQQHLL RLLKSLTRQGHLHVCVVLHDLNLAALWSDRILLLHNGAIVSQGMPETVLQADALAHWYGA QVHVGRHPAHAAPQVFLAP >gi|333596726|gb|GL892086.1| GENE 559 604407 - 605849 1637 480 aa, chain - ## HITS:1 COG:ECs2413 KEGG:ns NR:ns ## COG: ECs2413 COG0397 # Protein_GI_number: 15831667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 480 1 478 478 781 78.0 0 MTLSFTAHWHDELPGFYTALKPTPLQNARLIWHNEALADSLGIPATLFQPEKGAGVWGGE TLLPGMKPLAQVYSGHQFGVWAGQLGDGRGILLGEQVLPNGETLDWHLKGAGLTPYSRMG DGRAVLRSTLRESLASEAMHALGIPTSRALSIVTSDTPVARETMERGAMLIRVAESHLRF GHFEHFYYRREPDKVRQLADYALRRHWPHLQNEPDRYVLWFRDIVARTASMIARWQAVGF AHGVMNTDNMSLLGLTFDYGPYGFLDDYQPGYICNHSDYQGRYRFDNQPAVGLWNLQRLA QSLSPFIDVDALNDALDSYQEVLLREYGVLMRNKLGLMTQEKGDNELLNGLFAIMAREGS DYTRTFRMLSQTAQQSASSPLRDEFIDRQAFDDWFAAYRARLQQEQIDDDTRQTQMKAVN PAMVLRNWLAQRAIEQAEQGDYTELHRLHIALRTPFADREDDYVSRPPDWGKRLEVSCSS >gi|333596726|gb|GL892086.1| GENE 560 605911 - 606624 441 237 aa, chain - ## HITS:1 COG:STM1344 KEGG:ns NR:ns ## COG: STM1344 COG2200 # Protein_GI_number: 16764695 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 1 237 1 237 237 259 54.0 2e-69 MIITLDNAYQSELLLLPARDSAGLLKGLEILVNFTGVGADVRIPTELVIPHLSWEDELVL FKEKLQLLDTCKLFFIQHQLIAWINITPAIIEFLLTNENAVSILERYPFLEFTVNENYPG LNNGKDDPDLARMAIQFPLVLANFGAGAASLKPVYDGLFKRVILDKNFIQQRVSALSFEP FMRAILWQIAPHCQSVMVSGIDDHGILQRVLPFNFGAMQGSLWPAVPAERVTTLVQQ >gi|333596726|gb|GL892086.1| GENE 561 606917 - 607381 282 154 aa, chain - ## HITS:1 COG:STM1343 KEGG:ns NR:ns ## COG: STM1343 COG0791 # Protein_GI_number: 16764694 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Salmonella typhimurium LT2 # 1 154 1 154 154 281 85.0 3e-76 MRFWFLLVAALFLAGCSSHRAPPPNPRLSDSITVIASLNDQLSNWRGTPYRYGGMSRGGV DCSGFVLMTFRDKFDLQLPRETRMQAEIGTEIDKDDLLPGDLVFFKTGSGESGLHVGIYD TDNQFIHASTSRGVMRSSLDNVYWRKNFWQARRI >gi|333596726|gb|GL892086.1| GENE 562 607454 - 608197 616 247 aa, chain - ## HITS:1 COG:ECs2416 KEGG:ns NR:ns ## COG: ECs2416 COG4138 # Protein_GI_number: 15831670 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 244 5 248 249 329 71.0 2e-90 MQLTDVAGKGRLEPVTAAVNAGEILHLVGPNGAGKSTLLARMAGLTTGEGEITFLGQSLV DWLPATLASRRSYLVQQQVPPFAMPVWHYLTLHLPDKNQTGLLTEVAAALGLDDKLTRQA SQLSGGEWQRVRLAAVILQIHPSGNPHGRLLLLDEPMSGLDVAQQAALDTLLSALCRKGI TVVMSSHDLNHTLRHAHRVWLLARGKLIASGTRDSVLTAPNLASAYHMSFRRLDIEGHKM LISTAQE >gi|333596726|gb|GL892086.1| GENE 563 608209 - 608760 768 183 aa, chain - ## HITS:1 COG:STM1341 KEGG:ns NR:ns ## COG: STM1341 COG0386 # Protein_GI_number: 16764692 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 332 84.0 3e-91 MQSDILNTEVTTIDGEKTTLEGYKGKVLLIVNAASKCGLTPQYEQLENIHKAWEKDGFTV LGFPCNQFLGQEPGSEEEIKTFCSTTYGVTFPMFSKIDVNGEDRHPLYAKLVAAAPTAVA PEESGFYERMASKGRAPLYPDDILWNFEKFLIGRDGQVVQRFSPDMTPEDPIVMESIKLA LAK >gi|333596726|gb|GL892086.1| GENE 564 608852 - 609832 1015 326 aa, chain - ## HITS:1 COG:STM1340 KEGG:ns NR:ns ## COG: STM1340 COG4139 # Protein_GI_number: 16764691 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 326 1 326 326 403 76.0 1e-112 MLDFARRQHRSDLRRLCLLGVLLIVATTVSLCAGERWLGPESWFTPEGQLFVWQIRLPRT LAVLLVGAALALCGTIMQALFENPLAEPGLLGVSNGAGVGLIAAVMLGGGELSAWGISLS AILGALLITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAVYFSTSFDLRQLMYWMM GGFGGVDWRQGWLMMLLIPIILWTAFQAQPLNILALGETSARQLGMPIGFWRNVLVIAIG WMVGVSVALAGAIGFIGLVIPHMLRLCGITDHRTLLPASAVAGAATLLIADIIARLALTA AELPIGVVTATLGAPVFIWLLLKAGR >gi|333596726|gb|GL892086.1| GENE 565 609936 - 610235 318 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 127 66 3e-27 MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENATPKAE >gi|333596726|gb|GL892086.1| GENE 566 610240 - 612627 2861 795 aa, chain - ## HITS:1 COG:ECs2420_2 KEGG:ns NR:ns ## COG: ECs2420_2 COG0072 # Protein_GI_number: 15831674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Escherichia coli O157:H7 # 140 795 1 656 656 1207 91.0 0 MKFSELWLREWVNTTLDSEALSNQITMAGLEVDGVDPVSGAFTGVVVGEVVECGQHPNAD KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISDDHSGIIELPQDAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA VLNQTELNVPEIAPVEATISDVLPIQVDAPEACPRYLGRVVKGINVKAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKNRIEGGIVVRMAKEGETLVLLDGSEAKLSAD TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY ERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTSEATLPKRATITLRRSKLDRLIGHH VADAQVTDILTRLGCEVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQ AGLVMGSHREADLSLKRVKTMLNDKGYQEVITYSFVDPKLQQLIHPGQEALILPSPISSE MSAMRLSLWTGLLGTIVYNQNRQQNRVRIFESGLRFVPDTQANLGIRQDLMLAGAISGNR YEEHWDLAKGTVDFYDMKGDLEAILDLTGKLSEIEFRAEAIPALHPGQSAAIYLDGKRVG FIGVVHPELERKLDLNGRTIVFELEWNPVADRVIPQAQDVSRFPANRRDIAVVVAENVPA ADILAECKKVGVNQVVGVNLFDVYRGKGVAEGFKSLAISLILQDTSRTLEEEEIAATVAK CVEALKERFQASLRD >gi|333596726|gb|GL892086.1| GENE 567 612643 - 613626 1332 327 aa, chain - ## HITS:1 COG:ECs2421 KEGG:ns NR:ns ## COG: ECs2421 COG0016 # Protein_GI_number: 15831675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 649 96.0 0 MSHLAELVASATAAINQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPAEERPAAGAVI NEAKEQVQQALNARKAELESAVLNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFF GELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDATRLLRTQTSGVQIRTMKD QAPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKNISFTNLKGTLHDFLNNFFEEDLQ VRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME RLTMLRYGVTDLRAFFENDLRFLKQFK >gi|333596726|gb|GL892086.1| GENE 568 613931 - 614287 578 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 227 100 2e-57 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA >gi|333596726|gb|GL892086.1| GENE 569 614338 - 614550 358 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401] # 1 70 1 70 70 142 98 6e-32 MEVIKMPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDL GLVIACLPYA >gi|333596726|gb|GL892086.1| GENE 570 614633 - 615112 663 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 158 2 159 159 259 79 3e-67 QEVRLTGLEGEQLGIVSLREAIEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSS KEQKKKQKVIQVKEIKFRPGTDDGDYQVKLRSLIRFLEDGDKAKITLRFRGREMAHQQIG MEVLNRVRDDLSELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|333596726|gb|GL892086.1| GENE 571 615179 - 617107 2082 642 aa, chain - ## HITS:1 COG:STM1333 KEGG:ns NR:ns ## COG: STM1333 COG0441 # Protein_GI_number: 16764684 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 642 1 642 642 1306 95.0 0 MPVITLPDGSQRHFDHAVSPMDVALDIGPGLAKATIAGRVNGELVDASDLIESDATLAII TAKDEEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDIDAL EKRMHELAETNYDVIKKKVSWHEARETFVKRGESYKVSILDENIAHDDKPGLYHHEEYVD MCRGPHVPNMRFCHHFKLMKIAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAA KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRSKLKEYQYQEVKGPFMMD RVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGS CHRNEPSGALHGLMRVRGFTQDDAHIFCTEDQVRDEVNACIRMVYDMYSTFGFEKIVVKL STRPEKRIGSDETWDRAEADLAVALEENGIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQC GTVQLDFSLPQRLSASYVGEDNERQVPVMIHRAILGSLERFIGILTEEFAGFFPTWLAPV QVVVMNITDSQADYVKELTQKLQNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKE VEAGKVAVRTRRGKDLGSLDVSEVIEKLQQEIRSRSLQQLEE >gi|333596726|gb|GL892086.1| GENE 572 617876 - 618109 278 77 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1723 NR:ns ## KEGG: Ent638_1723 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 77 37 113 113 107 83.0 2e-22 MKKIKTATAAMVLSALSFGVFAADNMAPPASDVNGQIGIAKASDVEAGSNIAPGSQSTGQ SMNDAFDVHKLVAGEWS >gi|333596726|gb|GL892086.1| GENE 573 618373 - 619131 722 252 aa, chain - ## HITS:1 COG:ydiY KEGG:ns NR:ns ## COG: ydiY COG3137 # Protein_GI_number: 16129676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative salt-induced outer membrane protein # Organism: Escherichia coli K12 # 1 252 1 252 252 422 88.0 1e-118 MKLLKTVPAALMLAGGVFASMNATADDTVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKS SSLTADSTLTWYGNTTAWSLWGNASNTSANDERSSEKYAAGGRSRYNMTDYDYLFGQASW LTDRYNGYRQRDVVTAGYGRQFLNGPVHSLRFEFGPGVRYDEYTNGEDETQPLGYASGTY AWQMTDNAKFTQGVSVFGAEDTTLNYESALNVAINEHFGLKVAYNVTWNSSPPDSAPEHT DRRTTISLGYKM >gi|333596726|gb|GL892086.1| GENE 574 619428 - 620360 924 310 aa, chain + ## HITS:1 COG:STM1326 KEGG:ns NR:ns ## COG: STM1326 COG1105 # Protein_GI_number: 16764677 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Salmonella typhimurium LT2 # 1 308 1 308 310 469 81.0 1e-132 MASIYTLTLSPSLDSATMTPQIYPEGKLRCSAPVFEPGGGGINVARAVTHLGGKATAIFP AGGATGEHLVALLADEQVAVDTVDAKDWTRQNLHVHVESSGEQYRFVMPGAKLSDDEFRQ LEEKVLTIESGSLLVISGSLPPGVKTEKLTGLVQAVLQRGIRCIVDSSGDALKAALEPGQ LELVKPNQKELSALVNRELNQPDDVRTAAEELVRTGKAHRVVVSLGPQGALAVDKTGYVQ VVPPPMKSQSTVGAGDSMVGAMVLKLAQGASLLEMARYGVAAGSAATINQGTRLCSLADT QKIVDYLAKS >gi|333596726|gb|GL892086.1| GENE 575 620452 - 620742 370 96 aa, chain + ## HITS:1 COG:no KEGG:ECL_02425 NR:ns ## KEGG: ECL_02425 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 96 1 96 96 144 86.0 2e-33 MSSGDITRYVVTVNIHEASLTELNELNNAFTRANFQLTLTDDEGNIHDLGSLAFGLISPL SQEEVKALASSLVESVTDKATEIDVDSWENWHKKEQ >gi|333596726|gb|GL892086.1| GENE 576 620848 - 621708 834 286 aa, chain + ## HITS:1 COG:ECs2431 KEGG:ns NR:ns ## COG: ECs2431 COG3001 # Protein_GI_number: 15831685 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 530 91.0 1e-150 MWQAISHLLSEQLGEGEIELRNELPGGEIHAAWHLRYAGRDLFVKCDERELLPIFTAEAD QLELLSRSKTVTVPQVLAVGSDRDYSFLVMNYLPARPLDAHNAFILGQQIARLHQWSDQP QFGLDFDNDLSTTPQPNAWQRRWSTFFAEQRIGWQLELAAEKGLAFGNIDAIVEHVQQRL ASHQPQASLLHGDLWSNNCALGPDGPYIFDPACYWGDRECDLAMLPLHPEQPPQIYDGYQ SVSPLPLDFLERQPVYQLYTLLNRAILFGGNHLVNAQRALDRILAA >gi|333596726|gb|GL892086.1| GENE 577 621742 - 622278 578 178 aa, chain - ## HITS:1 COG:no KEGG:ECL_02427 NR:ns ## KEGG: ECL_02427 # Name: not_defined # Def: putative regulatory protein # Organism: E.cloacae # Pathway: not_defined # 1 178 1 178 178 316 91.0 3e-85 MTYQQAGRIAVLKRIAGWVIFIPALISTLISVLKFMYDHSEKQPGINAVMLDFAHVMIEM MRFNTPFLNVFWFNSPTPDFHNQLNIGFWIIYALIFIAMALQASGARMSRQTRFLREGVE DQLILEKAKGPDGMSREQIESRIVVPRHTIFVQFFPLYVLPIVIIVAGYFFFTLLGFL >gi|333596726|gb|GL892086.1| GENE 578 622421 - 623092 820 223 aa, chain + ## HITS:1 COG:STM1322 KEGG:ns NR:ns ## COG: STM1322 COG0637 # Protein_GI_number: 16764673 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 222 1 222 222 367 85.0 1e-101 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL WYAHQPWVGPDRDEVTARIINRAISLVEEYKPLLPGVHDAIALCKAQGLKVGLASASPLH MLEKVLTMFGLRDSFDALASAEKLPYSKPHPQVYMDCAAKLGLDPLTCVALEDSVNGMVA SKAARMRSIVVPAEEGRHDPRFALADVRLTSLEELTARHLRGE >gi|333596726|gb|GL892086.1| GENE 579 623221 - 623982 850 253 aa, chain + ## HITS:1 COG:YPO1724 KEGG:ns NR:ns ## COG: YPO1724 COG1028 # Protein_GI_number: 16121984 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Yersinia pestis # 1 253 1 253 253 389 75.0 1e-108 MILDAFTLAGKVAIVTGCDTGLGQGMAIALAQAGCDIVGVNRKVPDETAARVTALGRRFF AIRADLGKQASIQSVVDTAVAEMGRIDILVNNAGTIRRADALEFSEKDWDEVIDLNLKSV FFLSQAVARQFIAQGQGGKIINIASMLSFQGGIRVPSYTASKSGVLGLTRLLANEWAARG INVNAIAPGYMATNNTRQLRDDEQRSQAILDRIPAGRWGLPEDLQGPVVFLASSASDYVN GHTLAVDGGWLAR >gi|333596726|gb|GL892086.1| GENE 580 624084 - 624674 373 196 aa, chain + ## HITS:1 COG:ECs2434 KEGG:ns NR:ns ## COG: ECs2434 COG1988 # Protein_GI_number: 15831688 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 196 5 200 200 349 87.0 2e-96 MTAEGHLLFSLACAVFAKNAELTPVLAQGDWWHIVPSAVLTCLLPDIDHPKSFLGQRLKW ISKPIARAFGHRGFTHSLLAVFGLLTLFYLKVPESWIVPADAIQGMVLGYLSHILADMLT PAGVPLLWPCRWRFRLPILVPQKGNQLERVLCMALFAYAIWMPQTLPENGAVRWSSQMIN SLQFQFNRFINHQIEH >gi|333596726|gb|GL892086.1| GENE 581 624802 - 626193 1966 463 aa, chain + ## HITS:1 COG:STM1320 KEGG:ns NR:ns ## COG: STM1320 COG1823 # Protein_GI_number: 16764671 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Salmonella typhimurium LT2 # 1 463 1 463 463 720 95.0 0 MNFPLIANIVVFVVLLLLLAQARHKQWSLAKKVLVGLVMGVVFGLALHAIYGSDSPVLKD SIQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA LVGVLVTNLFGLTAEGLVQGSAETARLTAIETNYVGKVADLTVPQMVLSFIPKNPFADLT GASPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLIAIDTLQSWVMKLVRLVMQLTPYG VLALMTKVVAGSNLQDIIKLGSFVIASYLGLGIMFVVHGILLGVNGVSPLKYFRKVWPVL TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAP TVGINPLDPVWIATLVGIVTISSAGVAGVGGGATFAALIVLPALGLPVTLVALLISVEPL IDMGRTALNVSGSMTAGTLTSQWLKQTDKTILESEEDAELAHR >gi|333596726|gb|GL892086.1| GENE 582 626242 - 626481 121 79 aa, chain - ## HITS:1 COG:no KEGG:KPN_01237 NR:ns ## KEGG: KPN_01237 # Name: cedA # Def: cell division modulator # Organism: K.pneumoniae # Pathway: not_defined # 1 78 32 109 110 132 83.0 3e-30 MKPLRQQNRQVISYVPRVEPAPPDHALKVDGFRDVWMLRGKYVAFVLIGEHFRRSPAFSV PESAQRWAVQTRQDEEVEE >gi|333596726|gb|GL892086.1| GENE 583 626684 - 628933 2469 749 aa, chain + ## HITS:1 COG:katE KEGG:ns NR:ns ## COG: katE COG0753 # Protein_GI_number: 16129686 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Escherichia coli K12 # 4 749 8 753 753 1326 86.0 0 MSNNDKPHQAPIHGTEESQPGMDSLAPADGSHKPSPGPSAPGEQPTAPGSMKSPDADNEK LKSLDPHRKGGEGYALTTNQGVRIADDQNSLRAGTRGPTLLEDFILREKITHFDHERIPE RIVHARGSAAHGYFQPYKSLKEITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRG FATKFYTEEGIFDLVGNNTPVFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVS LQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPVAGKASLVW DEAQKLTGRDPDFHRRELWESIEAGDFPEYELGLQLIPEEDEFKFDFDLLDPTKLIPEEL VPVQLVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLG GPNFHEIPINRPTCPYHNFQRDGMHRQDIDTNPANYEPNSINDNWPRETPPGPKRGGFES YQERVDGTKIRERSPSFGEYYAHPRLFWNSQTPIEQQHIIGGFSFELSKVVRTYIRERVV DHLAHIDIQLAQGVANNLGITLTDEQCHAAPPKDVNGLKKDPSLSLYAVPGGSIKGRVVA ILLNDKPRASDVLGIMKALKTQGVHAKLLYSRMGEVTADDGSVLPIAATFAGAPSLTVDA VIMPCGDVESLIGNGDAAYYLLEAYKHLKPIALAGDARKFKSLLKVPDQGEEGIVEGDNV DDAFMTRLFDLLAAHRVWSRSSKIDQIPA >gi|333596726|gb|GL892086.1| GENE 584 629050 - 629799 895 249 aa, chain - ## HITS:1 COG:STM1317 KEGG:ns NR:ns ## COG: STM1317 COG3394 # Protein_GI_number: 16764668 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 249 1 252 252 382 71.0 1e-106 MENLLIVNADDFGLSKGQNYGIIEACRRGVVTSTTALINGEAVEHAAQLSREVPELGVGM HFVLTLGLPLSPMPGLTREGQLGKWIWEIAEQDALPLDEIARELDCQFNRFVDLFGREPT HIDSHHHVHMIPAIFPIVAEFAQRKGVAMRVDRDVHGLPDVAVTSTEGFSSAFYGDEIDE ALFLKVLDESAAKGERSLEVMAHPAFVDNIVRKSAYCWPRLAELDVLTSASLKYAIAERG YRLGTFRDL >gi|333596726|gb|GL892086.1| GENE 585 629811 - 631166 1780 451 aa, chain - ## HITS:1 COG:ECs2440 KEGG:ns NR:ns ## COG: ECs2440 COG1486 # Protein_GI_number: 15831694 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 860 89.0 0 MQQKLKVVTIGGGSSYTPELLEGFLKRYHELPVSELWLVDVEEGQEKLNIIFELCKRMVE KAGVPLTVHKTLDRRLALKDADFVTTQLRVGQLKARELDERIPLSHGYLGQETNGAGGLF KGLRTIPVIFDIIKDVEEICPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM FIRDVLELTDNDELSIDLFGLNHMVFIKDVMVNGQSRFAELLDGVASGRLTAASVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKDP NLNVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNVPHHGHIDNIPADWAVEMTCI LGRDGAKPHPRITHFDDKVMGLIHTIKGFEVAASNAALSGELNDVLLALNLSPLVHSDRD AEKLASEMILAHEKWLPNFAATVEKLKHTHR >gi|333596726|gb|GL892086.1| GENE 586 631276 - 632094 795 272 aa, chain - ## HITS:1 COG:STM1315 KEGG:ns NR:ns ## COG: STM1315 COG2207 # Protein_GI_number: 16764666 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 2 272 10 279 280 429 83.0 1e-120 MEIKTAHEQQLFNGKNFHVVIYNKTESASGLHQHDYYEFTIVLTGRYYQEINGKRVLLER GDFVFLPMGSYHQSFYEFGATRILNVGVSRRFFEKHYLTLVPFCFVASQVYRVKNEFMTW IETVIASLNFRDNEFDEFIETVTFYVMNRLRHHREEQQVVDDIPQWLRSTVELMHDKGQF SENALENMVALSGKSQEYLTRATQRYYRKTPVQIINEIRINFAKKQLEITNYSVTDIAYE SGYSSPSLFIKTFKKLTSFTPNSYRKNLTVIN >gi|333596726|gb|GL892086.1| GENE 587 632124 - 632471 479 115 aa, chain - ## HITS:1 COG:STM1314 KEGG:ns NR:ns ## COG: STM1314 COG1447 # Protein_GI_number: 16764665 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 145 82.0 1e-35 MLDLENIVAEETAENDLEEVVMGLIINSGQARSLAYAALKQAKQGDFVAAKTMMEQSRTA LNEAHLVQTKLIESDQGEGKMKVSLVLVHAQDHLMTSMLARELVAELIELHEKMQ >gi|333596726|gb|GL892086.1| GENE 588 632519 - 633877 1567 452 aa, chain - ## HITS:1 COG:celB KEGG:ns NR:ns ## COG: celB COG1455 # Protein_GI_number: 16129691 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Escherichia coli K12 # 1 452 1 452 452 734 89.0 0 MSKVIASLEKVLLPFAVKIGKQPHVNAIKNGFIKLMPLTLAGAMFVLINNVFLSFGEGSF FYSLGIRLDASTIETLNGLKAIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDPLAAGLL SIAAFMTVTPYSVGDAYAVGANWLGGANIISGIIIGLVVAEMFTFVIRRNWVIRLPDSVP ASVSRSFSALIPGFIILSIMGIIAWALSHWGTNFHQIIMDSISTPLASMGSVVGWAYVIF TSLLWFFGVHGSLALAALDSGIMTPWALENVALYQQYGSVDAALAAGKTFHVWAKPMLDS YIFLGGTGATLGLIIAVFIVSRRADHRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIP FILVQPLLAAITLTAYYLGIIPPVTNIAPWTMPAGLGAFFNTNGSVAAFLLAIFNLGIAT LLYMPFVAIANKAATVIDEEESEEDIALALKF >gi|333596726|gb|GL892086.1| GENE 589 633958 - 634275 451 105 aa, chain - ## HITS:1 COG:ECs2444 KEGG:ns NR:ns ## COG: ECs2444 COG1440 # Protein_GI_number: 15831698 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 93 1 93 106 167 93.0 5e-42 MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVVIEAFPETLAGEKGQAADVILLGPQI AYMLPEIQRLLPDKPVEVIDSVLYGKIDGLGVLKAAVAAIKKAAN >gi|333596726|gb|GL892086.1| GENE 590 634557 - 634901 348 114 aa, chain - ## HITS:1 COG:no KEGG:ECL_02440 NR:ns ## KEGG: ECL_02440 # Name: not_defined # Def: DNA-binding transcriptional activator OsmE # Organism: E.cloacae # Pathway: not_defined # 1 114 1 114 114 209 100.0 4e-53 MNKNVAGILSAAAVLTMLAGCTAYDRTKDQFTQPVVKDVKKGMTRSQVAAIAGKPSSEVT MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQAPKAQ >gi|333596726|gb|GL892086.1| GENE 591 635133 - 635960 1175 275 aa, chain + ## HITS:1 COG:STM1310 KEGG:ns NR:ns ## COG: STM1310 COG0171 # Protein_GI_number: 16764661 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 502 91.0 1e-142 MALQQEIIQALGAKPAIDASEEIRRSVDFLKAYLSAHPFLKTLVLGISGGQDSTLAGKLS QMAVSELRDETGDTALQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGSVLASEQ ALREAGIELSDFVRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAITGFFTKYGDGGTD INPLFRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEAALGVTYDNIDDYLEG KTLDEGTAKIIEGWYLKTEHKRRPPITVFDDFWKK >gi|333596726|gb|GL892086.1| GENE 592 636049 - 636954 896 301 aa, chain + ## HITS:1 COG:STM1309 KEGG:ns NR:ns ## COG: STM1309 COG0322 # Protein_GI_number: 16764660 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Salmonella typhimurium LT2 # 1 296 1 296 302 459 74.0 1e-129 MPEQYMEQYVSRRQSAPRLEFEAAAIYEYPEHLRPWLEALPKQPGVYFFHGDSDTMPLYI GKSVNIRSRVMSHLRTPDEASMLRQSRRITWVETAGELGALLLEARLIKEQQPLFNKRLR RNRQLCSLQVNAGKPQVVYAREVDFSHEPNLYGLFANKRAALQTLQSLADELQLCYGLLG LESTTRGRACFRSALKRCAGACCGKESVEEHHARFMAGLASISVNCWPWEGAVALKETRD AMTHYHIIRNWLWLGAVESLDDATALLRTPAGFDQDGYKILCKPLLTGKYEIIVLNDPAA R >gi|333596726|gb|GL892086.1| GENE 593 636932 - 637489 422 185 aa, chain - ## HITS:1 COG:ydjR KEGG:ns NR:ns ## COG: ydjR COG3758 # Protein_GI_number: 16129696 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 185 22 206 212 286 71.0 2e-77 MEFFDIRKMPVSLWRNGAGETREICCVPPATRDFFWRASIASIASNGEFSAFPGVDRVIT LLEGGEVTLDAGRAFCHTLKHHQPYRFAGDLAVKAVLTEGQMSMDFNIMTRRDRCQAKVR VATRTFTTFASRGGVAFVLSGAWQLGDKLLTADQGASWEEGSHTLRLLESKGSLLFSEIT WLPGH >gi|333596726|gb|GL892086.1| GENE 594 637657 - 638151 630 164 aa, chain - ## HITS:1 COG:spy KEGG:ns NR:ns ## COG: spy COG3678 # Protein_GI_number: 16129697 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli K12 # 1 164 1 161 161 181 80.0 6e-46 MRKLTALFVASTLALGATSMAFAADTATTTAAPTEGKMMMHHKGKPGMHHEMMMFKDLNL TDAQKQQIRDIMKSQRDQMKRPPLEERRAMHDIIASDSFDKAKAEAQIDKMAEQHKARML AHMETQNKIYNILTAEQKKQFNANFEKRLTERAAPEGKMPAPTE >gi|333596726|gb|GL892086.1| GENE 595 638488 - 639453 840 321 aa, chain - ## HITS:1 COG:STM1307 KEGG:ns NR:ns ## COG: STM1307 COG2988 # Protein_GI_number: 16764658 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Salmonella typhimurium LT2 # 1 320 1 321 322 402 64.0 1e-112 MENLLALTLGEETPARHEGEGPSFHWRWRGPGVLELTPTGEYNLSLLLSSGIHGNETAPV EIVDLLLRALYRAEITLHCRLLVVLGNPPALAQNKRYLVSDINRMFGGRWADFPQSDETT RAQWLEKVVTAFFAGAGETRWHLDLHTAIRASYHVRFGVLPQRHQPWDDAFLTWLGDAGL EALVFHQTPGGTFTHFTCEHFGALSCTLELGKALPFGQNDLTRFAPTHQALRALLAGVAP EPTREPVVRYRVVQQITRRSEAFQLHMAPHTLNFTPFRQGVLLAEDGETRYAVEKSTEYV LFPNPSVAFGLRAGLMLEKMS >gi|333596726|gb|GL892086.1| GENE 596 639463 - 640788 1547 441 aa, chain - ## HITS:1 COG:astB KEGG:ns NR:ns ## COG: astB COG3724 # Protein_GI_number: 16129699 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Escherichia coli K12 # 1 441 1 441 447 713 81.0 0 MKAREVNFDGLVGLTHHYAGLSFGNEASTKHRFQVSNPKLAAKQGLLKMKALSDAGFPQA VIPPQERPNVAVLRQLGFSGTDEQVVEKAGTQTPHLLSAASSASSMWVANAATVAPSADT LDGKVHLTVANLNNKFHRASEAETTGHVLRAIFNHDAHFEVHSALPQVAMFGDEGAANHN RLGGDYGEPGLQLFVYGREEGGHAAPVRYPARQTLAASQAVARLNQVNPSQVIFAQQNPQ VIDQGVFHNDVIAVSNRQVLFCHEQAFAHQEKLLATLRERVPGFMPVQVPTQAVSVQDAV ETYLFNSQLLSREDGSMMLVLPQESREHQGVWRYLSELVQADNPIDELRVFDLRESMANG GGPACLRLRVVLTPEEMQAVNPAVMMNDTLFNTLNDWVDRYYRDRLVQADLVDPQLLREG REALDALSTILQLGSVYPFQR >gi|333596726|gb|GL892086.1| GENE 597 640775 - 642262 1506 495 aa, chain - ## HITS:1 COG:astD KEGG:ns NR:ns ## COG: astD COG1012 # Protein_GI_number: 16129700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 488 1 488 492 787 79.0 0 MTLWINGDWVTGEGDARTKTNPVGQEVLWSGNDASAGQVERACQAARRAFPAWAKRPFSE RQALVEKFAALLEANKAELTRIIACETSKPRWEATTEITAMINKIAISVKAYHTRTGEQH TEMPDGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVIFKPSELTPLTGEAV VKLWEQAGLPPGVLNLVQGGRETGQALSALSDIDGLLFTGSAGTGYQLHRQLAGQPEKIL ALEMGGNNPLIVEDPDDIDAAVHLTIQSAFITAGQRCTCARRLLVKRGAQGDAFLKRLVE VSARLVPAKWDAEPQPFIGGLISGQAALNVLTAWQEHVARGAKTLLEPKQVMPGTSLLTP GIIEMSATSNVPDEEVFGPLLCVWRYDDFESAIAMANNTRYGLSSGLISPHREKFEQLLL EARAGIVNWNKPLTGAASTAPFGGVGASGNHRASAWYAADYCAWPMASLETPALTLPETL NPGLDFTEGDAHESA >gi|333596726|gb|GL892086.1| GENE 598 642259 - 643293 1179 344 aa, chain - ## HITS:1 COG:ECs2453 KEGG:ns NR:ns ## COG: ECs2453 COG3138 # Protein_GI_number: 15831707 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Escherichia coli O157:H7 # 1 344 1 344 344 647 86.0 0 MMVIRPVAHGDLAGLMQLAGKTGGGLTSLPADEKTLSARIERALQTWQGTLPKSEQGYVF VLEDTDTGTVAGICAIEVAVGLNDPWYNYRVGTMVHASKELNVYNALPTLFLCNDHTGAS ELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDRFNEKVVAEMRGVIDETGYSPFWESLG ERFFSMEFSRADYLCGTGQKAFIAELMPKHPIYTHFLTPEAQAVIGEVHPQTAPARAVLE KEGFRYRNYVDIFDGGPTLECDIDRVRAIRKSRLVEVSEGQPAPGEWPACLVSNENYTNF RVMLVRTNPTCERLVLTAAQLDALKCNAGDTVRQVRLCPEEKTA >gi|333596726|gb|GL892086.1| GENE 599 643290 - 644510 1516 406 aa, chain - ## HITS:1 COG:ECs2454 KEGG:ns NR:ns ## COG: ECs2454 COG4992 # Protein_GI_number: 15831708 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 702 83.0 0 MSLSVTRENFDEWMMPVYAPAAFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHANPAL RQALNDQAAKFWHTGNGYTNEPALRLAKKLIDATFAEKVFFCNSGAEANEAALKLARKYA HDKFGAHKSGIVAFKNAFHGRTLFTVSAGGQPSYSQDFAPLPPDIRHAVYNDLHSASELI DDTTCAVIVEPMQGEGGVMPADNAFLQGLRELCDRHNAVLIFDEVQTGVGRTGELYAYMH YGVTPDVLSTAKALGGGFPVGAMLTTEKFASVMTVGTHGTTYGGNPLATAVAGQVLDIIN TPEVLNGVKQRHQWFVERLTAINSKTGLFKEIRGLGLLIGCELAPEFVGKAKLISQEAAK QGVMVLIAGANVVRFAPALIVSEEEVRTGLDHFALACEQVKAGVSS >gi|333596726|gb|GL892086.1| GENE 600 644944 - 645750 1035 268 aa, chain + ## HITS:1 COG:xthA KEGG:ns NR:ns ## COG: xthA COG0708 # Protein_GI_number: 16129703 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Escherichia coli K12 # 1 267 1 267 268 524 91.0 1e-149 MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK GHYGVALLTKDTPVSVRRGFPGDDEEAQRRIIMAEIPSALGNVTVINGYFPQGESRDHET KFPAKAKFYQDLQNYLTTELKKDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL PEEREWMERLLGWGLVDTFRTANPETQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAER CIETGIDYDIRSMEKPSDHAPVWATFKL >gi|333596726|gb|GL892086.1| GENE 601 645820 - 646440 217 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146276129|ref|YP_001166288.1| ribosomal protein S16 [Rhodobacter sphaeroides ATCC 17025] # 1 192 8 203 219 88 31 1e-15 MLPPGTLSLDTLKIHQRMLLARVEQAPLQSALLYFVVYVLVSALSIPGAALLTLLGGALF SLWEATLLVSFASTLGATLAMLVSRYLLRDWVQRRFAAQMNTIDAGMDRDGARYLFALRL MPLFPFFLVNLLMGLTRLRVRHYWWVSQLAMLPATVIYLNAGRELGKLTSLRDILSPGVL FAFTLLGLLPLATRWLFSRNIPSIKK >gi|333596726|gb|GL892086.1| GENE 602 646447 - 647616 1073 389 aa, chain + ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 19 388 18 388 389 522 75.0 1e-148 MRRVRFCAFLTSLLLATSAFAAESWQSLQQQANGQTVWFNAWGGDEAVNRYLDWVSGEMK THYAINLKIVHLADAADAVKRIQTEQAAGRSSNGSVDLLWVNGENFRTLKEANLLLTGWA QTLPNWHYVDTRKPVTEDFAIPTDGAESPWGGAQLTFIARKTSMPTPPADPHALLVYAQQ HPGKVSYPRPPDFTGTAFLEQLLLALTAHPEALKKAPDSTFAQVTAPLWDYLDTLHPLLW REGNDFPPSPARMDTLLASGSLNLSLTFNPAHAMQKVANGELPADSYSFGFLKGMIGNVH FVAIPANTRASAGAKVVANFLLSPQAQIRKADPAVWGDPSVLDGAKLPAKAAKQLRAFTP SGTPDVLPEPHAAWVNALEQEWLRRYGTR >gi|333596726|gb|GL892086.1| GENE 603 647637 - 649118 1412 493 aa, chain + ## HITS:1 COG:ECs2461 KEGG:ns NR:ns ## COG: ECs2461 COG4135 # Protein_GI_number: 15831715 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 493 2 496 496 451 62.0 1e-126 MVVIYLPLLPASGMLLAPAFSLVNWASLFADPQLPQALAATLVSTLIATLGSLFIALSLL ALLWPGEGWQRLSTRLPWLLAVPHVAFATSALLLFAEGGQFYRICTVCSPQLDRYGIGLG LTLAVKESAFVLWAIYAALPEKRLAQQKIVLHTFGYGRMQALCWLILPAIAPALGAVMLA VLAWSLSVVDVAIVLGPGNPPTLAVLAWQWLTQGDAQQQIKVTLLCLVLLLLLVALAAVG YGLWTAWRRARPDISGVRRASNTALPARTLGGLLPLCGVLCALVLLMLARRNDIGPVSDS LSLGLLSSLTALAILMLWLEWGPQRGAVWIWLPLALPALPLVSGQYAVALWLGIDGQYAA VLWSHMLWVLPWMLLVLQPAWRRLDPRLILTARTLGWRQAKIFWLVKCPLMIRPALLAFA TGFSVSMAQYMPTLWLGAGRFTTLTTEAVALSSGGSIPILASRALGLLLLTSSVFGLAAL LSRLVGRHRQGLR >gi|333596726|gb|GL892086.1| GENE 604 649118 - 649738 187 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 189 9 198 245 76 30 4e-12 MLNVKNLTIAPLLREVNFRVPAGEIVTLMGPSGSGKSTLFAWMVGALSADFKAHGELWLN DRRCDMLPVETRGIGILFQDALLFDAFSVGQNLMLALPSHLTGRARRDAAEQALETAGLA NHYASDPATLSGGERARVSLLRALLAQPQALLLDEPFSRLDKALRTSFRAWVFETIRERN IPVVLVTHDEEDIPPGGEVIEISRWQ >gi|333596726|gb|GL892086.1| GENE 605 649812 - 651119 1379 435 aa, chain + ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 434 6 439 440 691 80.0 0 MKRVSQLTALALICGLASLSSMAADMPHSLTLAQLQAQNGAVIDTRISAFYNGWPQTLSG TSGHEPAALNLSARWLGAMSDEQLSGWAEQHRLTPDMPVALYGNDADNQTVKTRLEKAGF THVSTLSDALQQSDRLQRLAHFEQLVYPQWIRQLQQGKPVTAAPAGEWKVIEAGWGAPKL YLLSHIPGAGYIDTNDVESEPLWNKVSDEKLKAMLAKHGIRHDTTVILYGRDVYAAARVA QIMLYAGVKDVRILDGGWKAWSDANLPVERGTPANVKPAPDFGAPIPGQPQLMVDMEQAR GMLHRQDASLVSIRSWPEFIGETSGYSYIKPKGEIAGARWGHAGSDATHMEDFHNPDGTM RSADDIAAMWKTWNILPEQHVAFYCGTGWRASEAFMYARAMGWQNVAVYDGGWNEWSSHP QNPVSTGERGPESTP >gi|333596726|gb|GL892086.1| GENE 606 651116 - 651733 920 205 aa, chain - ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 205 3 207 208 288 81.0 5e-78 MLDKHLHPRLKPGLNQLAAALDKPFITPDGLTLAGFAIGVLALPFLALGWYPAALVAIVL NRLLDGLDGALARRRGLTDAGGFLDIALDFLFYALVPFGFALAAPADNAIAAAWLLFAFM GTGSSFLAFAALAGKHDIDNPGYAHKSLYYIGGLTEGTETIALFVLCCLFPAHFPLFAWA FGALCWLTTTTRIWSGYITLKSLPR >gi|333596726|gb|GL892086.1| GENE 607 651723 - 652265 552 180 aa, chain - ## HITS:1 COG:ynjA KEGG:ns NR:ns ## COG: ynjA COG2128 # Protein_GI_number: 16129707 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 170 6 175 182 204 52.0 7e-53 MKTLPVSLSPIAAMQKKHFGAVLNPTRWWGRMPRLFWLVALFVGYLERRKARLTPVLRSL LMTRVSQICHCAFCIDANSLRLAERSGALDKVQAVSDWQHSTLFSEEERAALAFAEAVTA TPPQVDENIKSQLKRHFTEETITEMTALIAFQNLSARFNAALDIPEQGLCAAFKGKPHAG >gi|333596726|gb|GL892086.1| GENE 608 652371 - 652787 472 138 aa, chain + ## HITS:1 COG:STM1301 KEGG:ns NR:ns ## COG: STM1301 COG0494 # Protein_GI_number: 16764652 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 133 1 133 138 196 75.0 7e-51 MLKTLDVVAAILEKEGKILLAQRPEHADQPGMWEFAGGKVEAGETQPEALIRELREELGI EAVPAQYVASHQREVSQRLIHLHAWHVPEFSGELKAHYHSALVWCTPEEAFTYDLAPADI PLLDAFILLRDARPAGSY >gi|333596726|gb|GL892086.1| GENE 609 652747 - 653019 271 90 aa, chain - ## HITS:1 COG:no KEGG:ECL_02459 NR:ns ## KEGG: ECL_02459 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 90 1 90 90 164 91.0 2e-39 MNRYAMAALCLMLSAGALADRIRPDVEVNVPPEVFSAGGQRAQPCNQCCIYQDQNYSEGA VVRADGVLLQCQRDERTLSTNPLVWRRVKE >gi|333596726|gb|GL892086.1| GENE 610 653245 - 654588 1679 447 aa, chain + ## HITS:1 COG:STM1299 KEGG:ns NR:ns ## COG: STM1299 COG0334 # Protein_GI_number: 16764650 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 447 1 447 447 856 93.0 0 MDQTRSLESFLAHVQQRDPHQSEFAQAVREVMTTLWPFLEENPRYRQMALLERLVEPERV IQFRVAWVDDRNQVQVNRAWRVQFNSAIGPFKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFDPKGKSEGEVMRFCQALVTELYRHLGPDTDVPAGDIGVGGREVGFMA GMMKKLSNNSACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGLSFEGMRVAVSGS GNVAQYAIEKAMAFGARVVTASDSSGTVVDEAGFTAEKLARLCEIKASRDGRVADYAREF GLTYLEGKQPWGVPVDIALPCATQNELDVDAARTLISNGVKAVAEGANMPTTIEATDLFL EAGVLFAPGKAANAGGVATSGLEMAQNAARMGWKAEKVDARLHHIMLDIHHACVEYGGEA SQTNYVRGANIAGFVKVADAMIGQGVI >gi|333596726|gb|GL892086.1| GENE 611 654878 - 655273 292 131 aa, chain - ## HITS:1 COG:STM3805 KEGG:ns NR:ns ## COG: STM3805 COG2149 # Protein_GI_number: 16767091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 22 129 7 115 115 89 45.0 1e-18 MSLQENNSSFPPRPRGKWWLAGKTPDYRFTLANERTFLAWIRTALALMAGAVGIEQFSPQ LSSVGLRMLLSALLLSVASALGIIAWRRWRHNEYAMRLGSDLPYTRVLLLLGGFILLSGL LLAVLLWQGVP >gi|333596726|gb|GL892086.1| GENE 612 655254 - 656138 760 294 aa, chain - ## HITS:1 COG:PM1714 KEGG:ns NR:ns ## COG: PM1714 COG1737 # Protein_GI_number: 15603579 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 19 288 18 288 288 165 33.0 8e-41 MSVNRENVRVYISNILGGLSETDRRIAGFILEQPAQVAQMPVSRLAEAIQVSEATIVRFC KRIGYGGLLDLKAALKRELLEESEQPLPVSPDIFLDDSRNEVAQKIALTLETTVKETIGL LDMKVVHPVVDRFLTASRVLFVGFGASGLSAMEARDKMNRQGIDSEAYTDRFTMTLKLAN LKPEDLVVAFSHSGETPEVVNAFRLARKAGAHCLAITHNLQSPLTELADNWLLTCGSAGP FQGDSIATRLSQLFIIEFLCTEITRHNLRDSASTGLSIKELLIKERIKRESSGE >gi|333596726|gb|GL892086.1| GENE 613 656195 - 657052 487 285 aa, chain - ## HITS:1 COG:lin1322 KEGG:ns NR:ns ## COG: lin1322 COG2017 # Protein_GI_number: 16800390 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Listeria innocua # 1 267 1 275 290 117 25.0 2e-26 MWTLENQRYTATVQATGGELVSLWHKQTRTERLWQPQAAVWNHTATPLFPVVGRLIHDGL WLDGEFWPLPAHGFLREQTFYCVEQTSDTLTLEACSTAQTLKLWPRRWRVRQTLSLDGGG LTFRQTVFNDDSRTLPYSAGWHPGFALAIASRPGWWVEFSAAVSGPFFTCDRTLNTGGQQ RDTTRFALARACFAAGAVYFGECQHRVIHVRAPDGTLALTLETGEQPWLALWGVPGADLL CIEPLAGTTDAPDADGQTRNKRGMRHLTAGESQTFTVRLRFTVDA >gi|333596726|gb|GL892086.1| GENE 614 657057 - 658805 1380 582 aa, chain - ## HITS:1 COG:STM0886 KEGG:ns NR:ns ## COG: STM0886 COG3119 # Protein_GI_number: 16764247 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Salmonella typhimurium LT2 # 1 493 1 495 495 484 49.0 1e-136 MKAVMLMFDTLTRNHLAPYGGDAITPNFTRLARESAQFDRFYVGSMPCMPARRELHTGRY NFLHRSWGPMEPYDFSTFQALREAGIHTHLVTDHKHYWRDGGATYHTRYTTFEFIRGQEG DRWKGQVEKPAIHWQGQEDEETLRRRSGRMTQDLINRAAMPGQEDHYTHRTIQAGMDFLE TNQHQDNWFLQIECFDPHEPFFVPEKYLAQYGCTADEFDGWVPYYCGAPGGQNDEKVRKF YQALVTMCDDYLGQVMDKLKALNLWDDTLFIVCTDHGFLLGEHQWWGKNIMPVYNEIANT PFFIRDPRSREYGVRRQALAQTIDIPATLLDYFHLPRPATMTGQPLGKAVAHDRPVRDYA LFGYFGGHINITDGNWVYMRCPREEGKDSLYEYTLMPTRIDSMFNVSELQNITLHPGFDF TQGAQVMQIPATFGYLNPWRFGDKLFDLHVDPGQMLSLADSEKTLHYAQAMRAMMQAHDA PSELYARFELDTISATREAAFAGRWSRLNVLAGCEHHGVEEALRFLLRAGKADGIAHDDL LAHFPAGKTLREADIFTLIDAFFSGDRHRALVYQTRLLLRTE >gi|333596726|gb|GL892086.1| GENE 615 658819 - 660354 1524 511 aa, chain - ## HITS:1 COG:SA0233_1 KEGG:ns NR:ns ## COG: SA0233_1 COG1263 # Protein_GI_number: 15925945 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 1 437 1 435 437 480 59.0 1e-135 MSKLFAGAQNLGKSFMLPIAVLPAAGLLLGFGGVFTNPVTLSTYPMLDNPFFQTVFTVMK LCGSVVFDNLSLLFAVGIAVGMARSDKGTAGLAAVLCYIVMNKAINASLLLSGTLASDNL AAAVQANVLGIVSLQTGVMGGIMSGLLAYWVQKRFGKTALPDLLAFFSGSRLVPILSSFF AIFLGVALFFVWPHIQAGISHLGGVVEKTGYVGTLFYGMILKCLIPLGLHHLFYLPFWLT SVGGEMVVNGQVVQGTQKIFFAQLADPTVSEYYIGVSRFMAGRFADFMFGLPGAALAIYH TSRPENRQKVASLMLSAALTAFVTGITEPLEFAFMFCAPLLYGVHIVLTGVAFMLTHILQ ITVGQTFSGGLIDFMLFGVLQGNAKTNWLLMLPLGAVMFCLYYFSFRFLIQWRQLKTPGR ERDEEAVDIAMAGNERAAGIVHALGGRENIVDVDCCATRLRVTVKNAKEVVVDDFKRLGS RGAFIRGEGVQIVYGPHVTLIKNEVEEFIGS >gi|333596726|gb|GL892086.1| GENE 616 660507 - 661721 626 404 aa, chain + ## HITS:1 COG:STM1287 KEGG:ns NR:ns ## COG: STM1287 COG0641 # Protein_GI_number: 16764638 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Salmonella typhimurium LT2 # 1 401 1 393 398 416 49.0 1e-116 MNRPFHLMAKSVSYQCNIACDYCFYLEKEHGTLQPRQPSRHMDDATLEAFVRQYISANPG PEVEFTWQGGEPTLAGIAFYERALGLQRQYAAGKRITNSIQTNGVLIDEAWASFLATNHF LVGLSIDGPAWLHDRYRKTRSQGSVFDKVVRAMSLLQQHNVDVNVLTVVNNVTAEHPQEI YRFLTRELGAKFVQFIPAVEQRPLAEKYGELLYPQSLAGGSVTEWSVSGEQWGKFINGVF DLWVRHDVGQVYVQLFDSALAAWLGETPSLCVMRSSCGSGLVVEQNGDVYSCDHYVYPEH RLGNLRRDSLVKMANGKKQRKFGLAKAAVSAECMRCDWRFACHGGCPKHRIHKIGQRWHN HLCAGYKAIFSHMDPYMRFMAKQIQHRQPPANVMMVAGTIASSD >gi|333596726|gb|GL892086.1| GENE 617 661835 - 663136 1094 433 aa, chain + ## HITS:1 COG:STM2478 KEGG:ns NR:ns ## COG: STM2478 COG1680 # Protein_GI_number: 16765798 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Salmonella typhimurium LT2 # 1 431 1 431 432 715 79.0 0 MKPGVICASLIALSLSAFAADYPVLTAAPPEDVGFNAEKLNKLDRWIQQQVDAGYPGMNV LVVKDNHIVFQKAWGYAKKYEGSHLASHPVMATTDTLYDLASNTKMYATNFALQKLVYEG KINVTDLVAKYIPGFADNPTDKIKGKDALRIIDILHHTAGFPADPQYPNKRVAGSLYSQD KQTTLEMIKRTPLDYPPGSKHVYSDVDYMILGFIIESVTAMPLDVYVEKEIYQPLGLKHT VFNPLLKGFKQPQIAATELNGNTRDGVISFPHIRTNTLWGEVHDEKAWYSMGGVSGHAGL FSNTRDIAVLMQTMLNGGHYGNVTLFDQKTVDAFTRRSAADATFGLGWRVNGNSSMTTTF GVLAGPQTYGHTGWTGTLTAIDPVKHMAIVILGNRPHSPVADPKLNPNVFVSGTLPAATY GWIVDQIYGALNE >gi|333596726|gb|GL892086.1| GENE 618 663188 - 665095 2286 635 aa, chain - ## HITS:1 COG:topB KEGG:ns NR:ns ## COG: topB COG0550 # Protein_GI_number: 16129717 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 634 1 638 653 1207 91.0 0 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR WNLNDLPIVPEKWRLQPRPSVTKQLNVIKRFLHEATEVVHAGDPDREGQLLVDEVLDYLE LAPEKRQQVQRCLINDLNPQAVERAISRLRANSEFIPLCVSALARARADWLYGINMTRAY TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPKDERFTAVW QPSDACESYQDEEGRLLHRPLAEHVVNRITGQPAIVTSYNDKRESEPAPLPFSLSALQIE AAKKFGLSAQNVLDICQKLYETHKLITYPRSDSRYLPEEHFAGRHSVMNAIGVHAPDLLP QPAVNPDTHNRCWDDKKVDAHHAIIPTARTSNVNLTDNEAKVYNLIARQYLMQFCPDAVF RKCVIELEIAKGKFVAKARFLAEAGWRTLLGNKERDEENDGTPLPVVAKDDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF LEKKGRYIHSTEPGRALIHSLPELAARPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY QLIDQARSTPVQRFRGMVAPGGGAKKPFKKKKSAA >gi|333596726|gb|GL892086.1| GENE 619 665100 - 666143 1482 347 aa, chain - ## HITS:1 COG:STM1297 KEGG:ns NR:ns ## COG: STM1297 COG0709 # Protein_GI_number: 16764648 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 625 91.0 1e-179 MSEQTIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG TSIISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPVNTLPPEIARD VIEGGRFACQQAGIALAGGHSIDAPEPIFGLAVTGVVPTERVKRNSTAQAGCKLFLTKPL GIGVLTTAEKKSLLKPEHIGLATEVMCQMNLAGAAFASIDGVKAMTDVTGFGLLGHLSEV CQGAGVQAQVWYQDVPKLPGVEEYIALGAVPGGTQRNFASYGHLMGEMPEAWRNLLCDPQ TSGGLLLAVTPEAEADVQATAAEFGITLTAIGELVTARGGRPMIEIR >gi|333596726|gb|GL892086.1| GENE 620 666260 - 666811 612 183 aa, chain - ## HITS:1 COG:STM1296 KEGG:ns NR:ns ## COG: STM1296 COG0778 # Protein_GI_number: 16764647 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 306 83.0 1e-83 MDALELLVNRRSASRLAEPAPVGEQLENILRAGMRAPDHGTLQPWHFFIIEGEGRDRFSQ LLEQGAVAAGQDEKGIDKARSAPFRAPMIIAVVAKCKADHKVPVWEQEMSAGCAVMAMQM AAVAQGFNGIWRTGPLTESAAVREGFSCGEHDKIVGFLYLGTPQLKASSTISVPDTTPFV SRF >gi|333596726|gb|GL892086.1| GENE 621 666979 - 668835 2233 618 aa, chain + ## HITS:1 COG:STM1295 KEGG:ns NR:ns ## COG: STM1295 COG0616 # Protein_GI_number: 16764646 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Salmonella typhimurium LT2 # 1 618 1 618 618 1043 83.0 0 MRTLWRIFAGFFKWTWRLLNFVRNLVMNIFFIFLVLVCAGIWMHISNANQSQHSTRGALL LDITGVIVDKPSTSNRLGVIGRQLFGATSDRLQENSLFDIVETIRQAKDDRNITGIVLDL KDFAGADQPSMQYIGKALREFRDSGKPVIAVGDSYTQGQYYLASFANKIWLSPQGAVDLH GFATNGLYYKSLLDKLKVTTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYL GTIAANRQITAEQVFPGARGVLDGLRKVDGDTAKYALDNKLVDQLGSSAEIEKALTKQFG WSKEDKNYSAISMYDYAAKKPDDSGDSIAVVFANGAIMDGEETPGNVGGDTTASQIRDAR LDPKVKAIVLRVNSPGGSVSASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY IVANPSTLTGSIGIFGVINTVENSLDYLGVHTDGVSTSPLADVSVTKSLPPEVSEMMQLS IESGYKRFITLVADSRKKTPDQIDQIAQGHVWTGQDAKSNGLVDSLGDFDDAVKKAAELA KLKQWHVDYYQDEPTFFDMVMDSMSGSVRAMLPDALQAYLPAPVATAAKAMKAESDKLAA FNDPQSRYAFCLTCANVR >gi|333596726|gb|GL892086.1| GENE 622 668898 - 669914 1414 338 aa, chain + ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 635 92.0 0 MQKKSIYVAYTGGTIGMQRSENGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYEPLMDS SDMTPEDWQHIADDIKAHYDQYDGFVILHGTDTMAFTASALSFMLENLSKPVIVTGSQIP LAELRSDGQINLLNSLYVAANYPINEVSLFFNNRLYRGNRTTKAHADGFDAFASPNLQPL LEAGIHIRRLGTPPAPNTAGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNGEFLKELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVISGFDM TVEATLTKLHYLLSQDLDIDSIRRAMMQNLRGELTPDE >gi|333596726|gb|GL892086.1| GENE 623 669924 - 670565 753 213 aa, chain + ## HITS:1 COG:ECs2475 KEGG:ns NR:ns ## COG: ECs2475 COG1335 # Protein_GI_number: 15831729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 213 7 219 219 379 85.0 1e-105 MKQRALLLVDLQNDFCAGGALAVAEGDSTVDVANTLIEWCKARGEAVVASQDWHPANHGS FASQHNVEPYSQGELDGLAQTFWPDHCVQQTEGAELHPLLNQKAIDAVFHKGENPAIDSY SAFFDNGHRQKTALDAWLRHHEITELIVMGLATDYCVKFTVLDALQLGYSVNVITDGCRG VNIQPQDSAQAFMDMAAEGATLYTLADWMETQA >gi|333596726|gb|GL892086.1| GENE 624 670791 - 672044 1535 417 aa, chain + ## HITS:1 COG:BH0916_1 KEGG:ns NR:ns ## COG: BH0916_1 COG3325 # Protein_GI_number: 15613479 # Func_class: G Carbohydrate transport and metabolism # Function: Chitinase # Organism: Bacillus halodurans # 98 417 143 450 450 163 35.0 8e-40 MKRLPLLAALPLLCASLASAAPLMSVGYFNGGGDVTAGPGGDINKLDVRQITHLNYSFGL VYNNEKDETNAALKDPAKLHQIWLSPKVASDLALIPTLRKQNPNLKVLLSVGGWGARGFS GAAATKESRAVFIRSAQEIVNKYGLDGIDLDWEYPVNGAWGLVDSTPADRDNFTALLKEM RDAFGKKKLVTIAVGANAESPKSWVDVKAIAPLLDYINLMTYDMAYGTQYFNANLYDSSA WPTVAAADKYSVDFVVNNYLAAGLKPQQMNLGIGFYGRVPKRAVEPGIDWSKPDAQNNPV TQPYFGPQEIGLFKSLGYDLTKDTYVKYNDIVRKLLNDPQKRFTEHWDDQAKVPWLSVKS ADGKALFAISYENPRSVAIKADYIKEKGLAGAMFWEYGADDENQLAKQLAKSLGIPH >gi|333596726|gb|GL892086.1| GENE 625 672089 - 672361 420 90 aa, chain - ## HITS:1 COG:ECs2486 KEGG:ns NR:ns ## COG: ECs2486 COG3139 # Protein_GI_number: 15831740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 16 105 105 151 85.0 3e-37 MNIDDMIAGMTPEVYQRLVTAVELGKWPDGVALTPEQKENSLQLVMLWQARNNTDAQHMT IDTNGQMVMKSKRELKEDFGITPKPIATFK >gi|333596726|gb|GL892086.1| GENE 626 672403 - 672816 360 137 aa, chain - ## HITS:1 COG:ECs2487 KEGG:ns NR:ns ## COG: ECs2487 COG0229 # Protein_GI_number: 15831741 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 238 78.0 2e-63 MSNQRNPDDLKKNLTEMQFYVTQNHGTEPPFSGRLLHNKREGVYHCLVCDAPLFNSHTKY DSGCGWPSFYEPVSDDAIRYLTDSSHGMVRTEIRCGNCDAHLGHVFPDGPQPTGERFCVN SASMSFTDDENGDQTQG >gi|333596726|gb|GL892086.1| GENE 627 673158 - 674153 1079 331 aa, chain + ## HITS:1 COG:STM1290 KEGG:ns NR:ns ## COG: STM1290 COG0057 # Protein_GI_number: 16764641 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 613 94.0 1e-175 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVGINDLLDAEYMAYMLKYDSTHGRFDGTVEV KDGHLVVNGKTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLT GPSKDNTPMFVRGANFETYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT ATQKTVDGPSHKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV VDLTVRLEKAASYEEIKKAIKAASEGPMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|333596726|gb|GL892086.1| GENE 628 674228 - 675112 863 294 aa, chain + ## HITS:1 COG:STM1289 KEGG:ns NR:ns ## COG: STM1289 COG0676 # Protein_GI_number: 16764640 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 483 79.0 1e-136 MINKIFALPVVEQLTPVLSRRQIDGADIIVVDHPRVKASVALNGAHLLSWKPEGEEEGLW LSEATSFKKGAAIRGGVPICWPWFGPSAQQGLPSHGFARNQQWTLKAHNEDENGAVLTFE LQANDETRALWPHEFTLYARFKLGKTCEIELEAHGEFETTSALHTYFNVGDIQAVKVSGL GDTFIDKVDNAKEGRLDDGVQTFPDRTDRVYLHPEACSVIHDGALNRGIEVVHHHHSNVV GWNPGPALSVSMADIPDDGYKTFVCVETACVTAPQQTSEEKPSRLGQTIKIVKR >gi|333596726|gb|GL892086.1| GENE 629 675181 - 675927 887 248 aa, chain - ## HITS:1 COG:STM1286 KEGG:ns NR:ns ## COG: STM1286 COG3713 # Protein_GI_number: 16764637 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Salmonella typhimurium LT2 # 1 248 1 248 248 364 72.0 1e-101 MTKLKLLALGIFAATAASTVQAESQWTVGAGAGVINSPYKQYDRDVYPIPVVTYEGDNFW FRGLGGGYYLWNDTADKLSIMAYYDPTHFKPGDSDSNALRQLDKRRSSLMAGLSYVHNTE YGFLRTALAGDTLDNSNGFIWDLAWLYRYTNGALTLTPGIGVQYSSENYNDYYYGVSKAE SRRSGLKSYSADDGWDPYLELTASYNFLGDWNVYGTGRYIRLSDEVKDSPMVDKSWSGIF SVGVTYKF >gi|333596726|gb|GL892086.1| GENE 630 676360 - 678294 2523 644 aa, chain + ## HITS:1 COG:STM1285 KEGG:ns NR:ns ## COG: STM1285 COG2766 # Protein_GI_number: 16764636 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Salmonella typhimurium LT2 # 1 644 1 644 644 1281 98.0 0 MNIFDHYRQRYEAAKDEEFTLQEFLTICRQDRSAYANAAERLLMAIGEPNMVDTALEPRL SRLFSNRVVARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKALMQRVPIYVLSANGERSPVNDHPLCLFNPQEDAQILEKEFGIPHRYLGTIMSPWA AKRLHEFGGDITKFRVVKVWPSILEQIAIAKTEPGDENNQDISALVGKVDIRKLEHHAQN DPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELVHAPCAPGT LETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHAEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYA EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARAHNNGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|333596726|gb|GL892086.1| GENE 631 678351 - 679652 944 433 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 7 433 1 442 445 368 43 1e-100 MQYGGYMTWFIDRRLNGKNKSTVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSI PNDDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDE FVFQISKDEYLDLLFEDLALPNLRKNQHRQLNEYKTHRAGYTANGVPANISVVRSLQNSL ARRTAMTAGKRRELRELETSLKVVENTEPAQLLEEERLRKEIAELRTKIDRVPFIDTFDL RYKNYEKRPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVEVVYIRH HTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYDPAQWNIYAAQASDGDNWADDS PLCHEILAKKILPVVRYYSYIEITRRAHQTLWREYEHLQAMFDNFAMQHIRDQDDIYPVF RELFQKQSSTTSN >gi|333596726|gb|GL892086.1| GENE 632 679910 - 680230 67 106 aa, chain - ## HITS:1 COG:no KEGG:ECL_01351 NR:ns ## KEGG: ECL_01351 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 106 1 106 106 155 76.0 5e-37 MGFASPATDYVERQLSPSVLCNIGAESRVLETDVGFAVIEPAMKKRPGDVLLILCDGHTQ FAKLIGKALITDDGEAIEGSALEEVEVLGRVTFFINRALDDDCPAI >gi|333596726|gb|GL892086.1| GENE 633 680218 - 680457 264 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQIPSEDPPHVSQDPVPVITTVCRLVSEAWLIALYPCIGVGSGEVPVKTTQLFYKAVCSQ VAVALWVKLYGRNKGGLNI >gi|333596726|gb|GL892086.1| GENE 634 681808 - 682041 129 77 aa, chain - ## HITS:1 COG:no KEGG:Rahaq_4504 NR:ns ## KEGG: Rahaq_4504 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 76 1 76 78 100 61.0 2e-20 MKNMILCLAVAVLLSGCAGVIEKQQPVCTGTALVGGQESSVQIYGVRKQNNQTQYRAGYP FNWTWVSANTFTSTTCH >gi|333596726|gb|GL892086.1| GENE 635 682149 - 682820 214 223 aa, chain - ## HITS:1 COG:no KEGG:Rahaq_4505 NR:ns ## KEGG: Rahaq_4505 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 222 1 224 224 119 36.0 1e-25 MAEYGVLLTTTSGEVWVTANSSPIALQARKTAALQGTSGFNTKVTHTFPAGQPVVAFVHC TVEVEITQTISGNTITIDFLRPNATGTAYVYFFSIFPQTKPDYGLAVWDASGTLILTNET RTLSDVVTLGTAGVDASSGYNINTTLAGKWACMPAMLGLITGVVSAGGQPQPYSAIYKSM AKLEGSNTRIFARPQTTPGGNLQNVAYSNLRNVIMAINCANYD >gi|333596726|gb|GL892086.1| GENE 636 682821 - 683135 108 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295096329|emb|CBK85419.1| ## NR: gi|295096329|emb|CBK85419.1| hypothetical protein ENC_17020 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 104 1 104 104 187 98.0 3e-46 MAEYGVQTWDASGNVNNYGVKPVSVCGYLQLAQNQKTGSYTVALPPGCRLTYFQSMNGDQ FGTSRRKITISGGTATVSAAGDTDYSAGTEPAAAAYLIFQIERA >gi|333596726|gb|GL892086.1| GENE 637 683179 - 687024 1826 1281 aa, chain - ## HITS:1 COG:YPO2131 KEGG:ns NR:ns ## COG: YPO2131 COG4733 # Protein_GI_number: 16122366 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 1 951 1 919 1067 1053 56.0 0 MTTTIIKGRGKGGSNQTRTPVEAPDSIQSIARAKVLIALGEGEFAGGLDGKNIFLGDSSS YTPLQNADGSYNFNNVKYEFRSGTQDQDYIQGFPGIENELQVSYELKQAVPYVRAVSNTQ LSALRIRLGWPTLLLQKNNGDKVGTRVEYAIDLSVDGGPYETVVNGAVDDKTTSLYERSH RVNLPKASTGWQLRVRRITPDSTSVNIVDTMRVVAVTEIIDAKLRYVNTALLYVEFDAKQ FPNGIPQVVCNPKGRIIRVPDTYDPETRTYSGKWEGVFKWAWTDNPAWIYYDIILNERFG LGQRIDATQIDKWELYRIAQYCDQLVPDGKGGSGTEPRFRCNVYIQDRNDAWTVLRDLAG IFRGMTYWGDNKMYVLADMPRDVWHIYNHASVVEGKFTFADPSETTRNTAALVNWSDPAN HYKDTPEPVYDNDLAMRFDYRQLEMTAIGCTRQSEANRRGRWALLTNGIGEVVTFSTGMD VPPVGEVIGVAANELAGRTIGGRVSAVNGRNITLDRAADVKAGNRLFLNLPSGTAQARTV QAVNGNTVTVTTPYSETPEAECNWGVDSDDLFIALFRVTGTRDNNDGTFEVTGTTYNPDI YSAVDTGARLDERPVSVIPPGVQAPPGNIVVDSYSTVNQNIAITTMRVAWDAVQGAVAYE AEWRRDSGNWVSVPRTSSLGFEVQGIYSGRYLVRVRAVNASDVSSVWATSSEVNLTGKVG NPPKPVGFIASDNVVFGIELSWGFPANTDDTLKTEIQYSLTGTEDDAMLLADVPYPQRKY QQMGLKAGQIFWYRAQLVDRSGNESGYTDFVRGQASIDVSDITDAILEEIKETDTFKDLI ESAVESSEKFAELADAIKENANGLAAAVGSNKQTAEAIIGNALAIADVVVRQTAQQGANS ATFEQLREVIATETEARVTDVTRLEAKTAQNEAGVTEVRQALSDEAQARATAVDQLTAST QVISDKADSASSKADAASGKADAAEQASSQNTADITTLRQVVTDTTSSMASRLEELGART DTASGGIQNNAIALITSTLAQVDQQVRLSAQYGDSKAGIDRIDNVMASDREATARSLLSL QTDVNGNKASINSLNQTFSDYQQATATQINGITATINGHTSAITTNAQAIANVNGDLKAM YSIKVAVDANGKQYAAGMGIGVENTPSGMQSQVLFLADRFAVMAQAGGAVTLPFVIQNGQ VFIRETLIQDGTIGNAKIGHYIQSNNYVAGSVGWRLDKGGTFENYGSTAGEGAMKQTNQT ISVKDANNVLRVQIGRITGTW >gi|333596726|gb|GL892086.1| GENE 638 687077 - 687664 158 195 aa, chain - ## HITS:1 COG:YPO2129 KEGG:ns NR:ns ## COG: YPO2129 COG4723 # Protein_GI_number: 16122364 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 2 194 7 205 206 194 55.0 6e-50 MERKTVIKLSGSMAQRFGRTHRRALTSASEVFRALSNTIDGFDAYLRETRAKGLDFVIFR NQINIGKEEFDLLGPGDEIRIIPVIRGSKRAGLFQIVTAAAIAAFTWWNPIGWAASTQMA LYAAAGSMAVGGVVQMLSPQVSGLRMRQEPDNKPSYAFGGPVNTTASGNPVPLLYGQREI GGAIISAGVYAEDQQ >gi|333596726|gb|GL892086.1| GENE 639 687664 - 688374 609 236 aa, chain - ## HITS:1 COG:YPO2123_1 KEGG:ns NR:ns ## COG: YPO2123_1 COG1310 # Protein_GI_number: 16122358 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Yersinia pestis # 1 125 1 123 123 180 68.0 2e-45 MRDKTVSAILAHAAASFPEECCGVVIQKGRVEKYIPCKNNSESPTEQFELNPEDYAAAEE QGTVVAIVHSHPGDGATTQPSELDMLMCDATELPWIIASWPEGDIRTVMPRGDRPLTGRQ FVLGYADCWSLIMDYFRIEHGIELPNYSVDRHWWEQGENLYMDNWQECGFREYDGPAQPG DMVIMQVQSTVPNHAGILLDGNMLLHHMYGQLSQRIPYGGYYRDRTIKILRYKDLM >gi|333596726|gb|GL892086.1| GENE 640 688377 - 689135 233 252 aa, chain - ## HITS:1 COG:YPO2122 KEGG:ns NR:ns ## COG: YPO2122 COG4672 # Protein_GI_number: 16122357 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 251 1 249 250 333 62.0 1e-91 MSISSDVQKLEPGKRVRLIEVDGSAFGAGILRFHNETIPHTEAEIIAAGGDESKLEPKSV WWQGQEYGAWPYELTGISVSSDGQSSRPSLTVANISGTIGALCRRFQGMAKAKVIIHDTF AHYLDARNFPDGNPTANPNEERKQVYYIDRKSGSDDETVEFELSSPADLRGQLIPTRQIQ PMCTWCMRGWYKTGNGCTYAGQNGWFDKDGNRVDDPSQDVCSGLLSTGCKPRFGENEQLD YGGFPGASLLRG >gi|333596726|gb|GL892086.1| GENE 641 689132 - 689470 298 112 aa, chain - ## HITS:1 COG:RSc1691 KEGG:ns NR:ns ## COG: RSc1691 COG4718 # Protein_GI_number: 17546410 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Ralstonia solanacearum # 1 112 1 112 112 94 43.0 6e-20 MAVETFSWCPKVASQVDTNFRTRKAQFGDGYAQVAGDGINPVTPQWSVSFTGDEAYIQTI KNFLNRHAGWKSFIWKPPLEPSGLWRAESFQISTHGNKKYTLSSTFIQAYHP >gi|333596726|gb|GL892086.1| GENE 642 689473 - 692937 1286 1154 aa, chain - ## HITS:1 COG:ECs2240 KEGG:ns NR:ns ## COG: ECs2240 COG5281 # Protein_GI_number: 15831494 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 1 1130 1 1061 1080 936 55.0 0 MATLRELIIKISANSQSFQTEISRASRMGQDYYRTMQNGGRQAAAAARESERALSDLTAG FASAGRAAAAATAAFATGKIVQIADEWNSVNARLKQASSSADDFAASQRQLMEISQRTGT AFSDNANLFSRAAASMREYGYSSDEVLKITEAVSTGLKISGANTQEASSVITQFSQALAQ GVLRGEEFNAVNEAGDRVIRALAAGMGVARKDLKSMADQGQLTIDKVVPALMSQLEALQG EFASMPQTVSGSLQKVTNSFMAWVGGVNQATGATDALSGGLDNVAQTLDSFTSSAVSGAL SDVADNMSTITTVAGALVGVGLARYLSGVVTSATSATGALISAAKSEVALAVAQDKAAQS AVAASRAEVYRAQQAVQSSRSADVQAAQQEKVAAAEANVTAAHTRLTTALASGTATEKVR ARTALERAQAGLVAAKNADTQAVAERRLAAAQAALNRNISNRVSTQSNLNSVTSVGTRLM SGALGLIGGVPGLVMLGAGAWYAMYQNQEQARRSAQEYASQIDEIREKTSRMSLSETDDN RGRTVGALVEQNRLIDEQAKKVRNLKDEIDKLNSARGQPGITSVNDADILRAIAIATDQL AVEEGKLNGMRDKSRGIQQTLEEIERRRNDLIREQAWRQNAAYQSMIMMNGQHTEFNRLL GLGNQLLMARQGLANVPLRLPQADLDKKQTDALEKSRRDLELSRLKGEAKERLRLSYAAD DLGLTSDPQFQTGRQELINNGLAEWRNNEANKPKAKGGKTEGEKTEDVYKRLIKQQKEQI ALQGQNTELAKVKYQVSQGELASLTEAQKKTVLQNAALIDQVKLREQLRNYEANLADSNA SARAANEAQLLGYGQGTRFRERLQEQFNLRKEFEQKNTDLLRQRQAGEIDETFYQQGLAL NKRYLEERLRDQEGYYAASDAQRDDWMTGLSEGYANWVDEATDYSSMAADGMKQAMGGAV TTITDMLNGNVDSWKDWGVSVLKIIQNVLVNMAVANGVSSIGSLFSFGASSAATASSGTA IQNAGANFTFNAKGNVYDSPSLSAYSNGVFQTPQLFAFAKGAGIFGEAGPEAIMPLTRAP NGDLAVRAVGMPQVSGGVPSVNFGDINIQGGSPQASSQGTAGAAGRQLKDAITGVINEQA SMPGSPLWRLIKGV >gi|333596726|gb|GL892086.1| GENE 643 692996 - 693307 160 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILVKAMKKLVLFVLFFGFSCVSNATQTLAPLEPNELQSYTSTICSDHANPELCKKAFFK IMGYIKTNDDYYYFCQKQKEAGMTINKDSCNKSEALREFLDKP >gi|333596726|gb|GL892086.1| GENE 644 693342 - 693620 278 92 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1015 NR:ns ## KEGG: APECO1_1015 # Name: not_defined # Def: phage-related minor tail protein # Organism: E.coli_APEC # Pathway: not_defined # 1 92 5 96 96 112 63.0 4e-24 MSLALRMGRTLSELRQNMTASELLMWIEYDRQSPVGDIRGDIQAAQLVSAIYGSQGAKVP LDDAILRWGGDEQSEPKDPFAGLEAALTAATQ >gi|333596726|gb|GL892086.1| GENE 645 693629 - 694012 412 127 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1016 NR:ns ## KEGG: APECO1_1016 # Name: not_defined # Def: putative tail assembly chaperone # Organism: E.coli_APEC # Pathway: not_defined # 2 122 8 128 128 165 70.0 5e-40 MKNIKNLALAKMSGFRHKTVAVPEWEGVKVVLREPSGEAWLRWQEVVKAGADDENVSVSE KAHRNLCADVVLFIDVLCDTDKQPVFSVDEEEQVREIYGPVHSRLLKQALDLINNADEAR EKSQPPA >gi|333596726|gb|GL892086.1| GENE 646 694021 - 694464 530 147 aa, chain - ## HITS:1 COG:no KEGG:Z1908 NR:ns ## KEGG: Z1908 # Name: not_defined # Def: putative tail component of prophage CP-933X # Organism: E.coli_O157 # Pathway: not_defined # 1 140 25 164 262 227 82.0 1e-58 MSALYEKSQLTKILISSLPATKETMDSATFLDLSCTIKEIQFTGGQKQDIDVTTLCSTEQ ENINGLPSPSEISLSGNFYKNPAQDALREAYDNDTTYAFQVIFPSGKGFKFLAEIRQHTW SSGTNGVVAATFSLRLKGKPENIESGS >gi|333596726|gb|GL892086.1| GENE 647 694868 - 695317 272 149 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2232 NR:ns ## KEGG: Ent638_2232 # Name: not_defined # Def: HK97 family phage protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 149 1 149 149 232 84.0 4e-60 MIETSLDFSGLNDIAKDLEALSRAENNKVLRDATRAGAEVLKEEVIARAPVRTGKLKKNV VVVTQKSRRRGEISSGVHIRGVNPRTGNSDNTMKANNPRNAFYWRFVELGTANMPAHPFV RPAYDTREEEAASVAIARMNQAIDEVLSK >gi|333596726|gb|GL892086.1| GENE 648 695314 - 695652 122 112 aa, chain - ## HITS:1 COG:ECs1593 KEGG:ns NR:ns ## COG: ECs1593 COG5614 # Protein_GI_number: 15830847 # Func_class: R General function prediction only # Function: Bacteriophage head-tail adaptor # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 105 47.0 1e-23 MEPGRFRHRVKILTFTTSRDPSGQPVESWSGGRPISAEVKGISGREQLSGGVETAQATIR VWMRFRADLNASSRLEVLSGPYKGQVLNIIGPPVANSTGTRLEILCKTGAEK >gi|333596726|gb|GL892086.1| GENE 649 695652 - 695978 278 108 aa, chain - ## HITS:1 COG:no KEGG:PMI0928 NR:ns ## KEGG: PMI0928 # Name: not_defined # Def: phage protein # Organism: P.mirabilis # Pathway: not_defined # 3 100 1 98 99 139 63.0 4e-32 MAIDVLDVISLSLFKQQIEFEEDDRDELITLYAQAAFDYCIRWCDEPAWKVAADIPAAVK GAVLLVFADMFEHRTAQSEVQLYENAAAERMMFIHRNWRGKAESEEGS >gi|333596726|gb|GL892086.1| GENE 650 696012 - 697169 1367 385 aa, chain - ## HITS:1 COG:no KEGG:PMI0927 NR:ns ## KEGG: PMI0927 # Name: not_defined # Def: major capsid protein # Organism: P.mirabilis # Pathway: not_defined # 1 383 1 383 388 591 78.0 1e-167 MSELALIQKAIEESQQKMTQLFDAQKAEIESTGQVSKQLQSDLMKVQEELTKSGTRLFDL EQKLASGAENPGEKKSFSERAAEELIKSWDGKQGTFGAKTFNKSLGSDADSAGSLIQPMQ IPGIIMPGLRRLTIRDLLAQGRISSNALEYVREEVFTNNADVVAEKALKPESDITFSKQT ANVKTIAHWVQASRQVMDDAPMLQSYINNRLMYGLALKEEGQLLNGDGTGDNLEGLNKVA TAYDTSLNATGDTRADIIAHAIYQVTESEFSASGIVLNPRDWHNIALLKDNEGRYIFGGP QAFTSNIMWGLPVVPTKAQAAGTFTVGGFDMASQVWDRMDATVEVSREDRDNFVKNMLTI LCEERLALAHYRPTAIIKGTFSSGS >gi|333596726|gb|GL892086.1| GENE 651 697172 - 697861 470 229 aa, chain - ## HITS:1 COG:AGc1747 KEGG:ns NR:ns ## COG: AGc1747 COG3740 # Protein_GI_number: 15888296 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 163 17 160 190 80 32.0 2e-15 MGAVMPEIVKTLSFDETEIKFTGDGKQGIFEGYASVFNNTDSDGDIILPGAFKNALANQT RKVAMFFNHRTWELPVGKWDNLEEDQKGLYVRGQLTPGHSGATDLKAAMQHGTVEGMSVG FSVAKDDYTTIPTGRIFKNVQALREISVCTFPANEQAGIAAMKSVDGIETIRDVENWLRD SVGLTKSQAVGLIARFKSAIRSESEGDGNEAQIKALLQSIQSFPSNLGK >gi|333596726|gb|GL892086.1| GENE 652 697867 - 699141 315 424 aa, chain - ## HITS:1 COG:mlr8522 KEGG:ns NR:ns ## COG: mlr8522 COG4695 # Protein_GI_number: 13477030 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Mesorhizobium loti # 18 399 7 388 410 174 29.0 2e-43 MEEPKYTIDLRTNNGWWAKLQSWFVGGRLVTPNQGSQTGPVSAHGHLGDSSINDERILQI STVWRCVSLISTLTACLPLDVFETDQNDNRKKVDLSNPLARLLRYSPNQYMTAQEFREAM TMQLCFFGNAYALIDRNSAGDVISLLPLQSASMDVKLVGKKVVYRYQRDSEYADFSQREI FHLKGFGFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILMTGDRVLTEPQR NQLEENFKEIAGGPVKKRLWILEAGFTTSPIGVTPQDAEMMASRKFQVSELARFFGVPPH LVGDVEKSTSWGSGIEQQNLGFLQYTLQPYISRWENSIQRWLIPAKDVGRIHAEHNLDGL LRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLPGGDVAMRQAQYVPITDLGTNKEPR NDGA >gi|333596726|gb|GL892086.1| GENE 653 699141 - 700655 914 504 aa, chain - ## HITS:1 COG:ECs1598 KEGG:ns NR:ns ## COG: ECs1598 COG4626 # Protein_GI_number: 15830852 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 # 5 496 46 541 553 152 27.0 2e-36 MTRGERVIAFIERFCIVPEGKLLGKAMRLDPFQKEFILAVYDNPVGTDKAILSIARKNGK TGLIAGILLAHLVGPEAVQNTQIVSGALSREQASIVFNLAVKMVNLNPKLQEIVHITPSG KKLIGLPCNVEYKALSAEGKTTHGLSPVLAILDETGQVRGPQDDFIDAITTAQGAHENPL LIVISTQAANDADLLSIWIDDAVKSKDPHIVCHVYEAPKDADISKRESWLAANPALGTFR SEKDMARQAEMASRMPSFENTFRNLNLNQRVSTVSPFISRSVWELCGGMPVNTPRKWYAG LDLSARNDLTALVIAGEAEDGIWDIFPFFWTPEKTLGARSKTDRAPYDVWAGEGLLRTTP GASVDYSFVVADIAEIIGDFDITSMAFDRWRIDQFRKEADDIGLNLPLVEFGQGFKDMGP AVDTLESLMLNGRVRHGMHPVLTMCAWNAVIVKDAAGNRKLDKSKATGRIDGMVAMTMSV GAANGEVTEQGGDFDDFIFRPLSM >gi|333596726|gb|GL892086.1| GENE 654 700662 - 701147 303 161 aa, chain - ## HITS:1 COG:no KEGG:XBJ1_2042 NR:ns ## KEGG: XBJ1_2042 # Name: not_defined # Def: terminase small subunit # Organism: X.bovienii # Pathway: not_defined # 4 160 3 157 157 136 54.0 3e-31 MADKRTRSDSSAAAVQAMKNAAVDTIDPPSHAGLEKKAEPFWHDNIRSKALDSWTPADLL AAVELANNQLYITVLRKDLRKEERIRGEERDEGLIKDLRKQIVELQRTILAQRRDLQIHS HATNGESRDQKKRNQNDRDARNTKNGHQDQDDNLIAFPKHG >gi|333596726|gb|GL892086.1| GENE 655 701331 - 701534 166 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332344513|gb|AEE57847.1| ## NR: gi|332344513|gb|AEE57847.1| hypothetical protein UMNK88_3297 [Escherichia coli UMNK88] # 1 67 1 67 67 96 80.0 6e-19 MKDLIIEYRDGKFVHLAIDGVEMKHVTSIQFSHTVGENVPTLTVSGHVWSEYGKGDQKLE QVDKHSA >gi|333596726|gb|GL892086.1| GENE 656 701534 - 701875 225 113 aa, chain - ## HITS:1 COG:RSc1680 KEGG:ns NR:ns ## COG: RSc1680 COG1403 # Protein_GI_number: 17546399 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Ralstonia solanacearum # 6 88 46 114 124 72 43.0 3e-13 MNKEPRVYGSRWDKARLRFLQQHPLCVMCEQQGRITPATVVDHIEPHKLKDALKSGNPLA ISKAQLLFWSKENWQPLCKAHHDSTKQRMEKSGAVIGCDANGYPLDPASHWST >gi|333596726|gb|GL892086.1| GENE 657 701872 - 702462 301 196 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2242 NR:ns ## KEGG: Ent638_2242 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 10 195 1 186 188 248 66.0 1e-64 MVSPQVRFVVVGHHTRMGHAQRLAAMLDAHLLIDDGNHGANWNHRRALEWAAEQPCRVVV LEDDALPVQGFTEKVTDWLVRFPDDMLSFYLGTGRPPQYQKEIAGMLVDADRVCGDHIVL SKLIHGVCYSPPQGRLARMLSAWNKTLAADYAVGEAFGGRVIYPCYSLVDHADMPAVERH PDNEPRTERRSAWRLA >gi|333596726|gb|GL892086.1| GENE 658 702444 - 703901 618 485 aa, chain - ## HITS:1 COG:no KEGG:ECL_01682 NR:ns ## KEGG: ECL_01682 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 485 1 485 485 755 74.0 0 MQVTIDGVPFVPACASASRIGIAISTHQRADVLKRSLEQHLRHLPAGALVVVVDDGSKPA AVVPNGVQLLRHETSLGIVASKNASLTALMDAGCEHLFLWDDDAWPIADNWHLPYIESPE PHLAYQFLDLAGTNKLKDMAILYRDDKHIAYTGQRGVMLYYHRSAIEKVGGFDRVYGRGM YEHPDLALRIHNAGLSTWAFADVVGSEKLIHSMDEHEEGTRSIPRPDREALVKRNVGIFN GRRDSGYTGFASYSTNPNLVITTLLTSQPDPQRGGKMKPDPQALQVWADSISGALPIVLA DELKESPTGADLVEVPLVGMSPYFARWLHIYQFLRSHPEYHLVWCTDGTDVEMLREPWAE MEPGKIYVGSEHKTYADEWMTVNHHGSAYQQFLKQHRDEPLLNAGLLGGSREDVMEFAHR IIRLYYRIESHRFWKMETAPATLVDMGAFGMAAKSFGDRIVTGPKVHTIFKTDGFGKEVA WFRHK >gi|333596726|gb|GL892086.1| GENE 659 704139 - 704624 243 161 aa, chain + ## HITS:1 COG:no KEGG:xccb100_1044 NR:ns ## KEGG: xccb100_1044 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_B100 # Pathway: not_defined # 1 161 1 160 160 131 43.0 1e-29 MPELVNPTDSLNSFQHALSNGLIRLSPCVVHPEMKVLMDDAEGTPRITYAFVQGDIVKGV AIYVPADPYEGKPCFGVGYAVADKFKRQGIATKLLKASIEEMQYGFRNSCNEFYVEAIVG VDNQASNKLASEVLSATPKPGKDSHSGKPINQYMKLFSTTK >gi|333596726|gb|GL892086.1| GENE 660 704642 - 704866 169 74 aa, chain - ## HITS:1 COG:no KEGG:ECL_01681 NR:ns ## KEGG: ECL_01681 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 28 68 2 42 44 72 85.0 5e-12 MSSRLLITCLMTMLIASCGTTGPVRVELVDTACDWVKPIYGTEHDWDMLDRQTKKDILAH NKAWQANCKPKWAQ >gi|333596726|gb|GL892086.1| GENE 661 704787 - 705059 250 90 aa, chain - ## HITS:1 COG:no KEGG:ECL_01680 NR:ns ## KEGG: ECL_01680 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 22 90 21 89 91 88 82.0 1e-16 MSIIEMILGGIAALVAVAFSGFVAGNIRGSGKAEAKARQQRTEENAAAAVAAAERKAEVT KEASNVQQTVNHMPDDDADRELRDNWTRKG >gi|333596726|gb|GL892086.1| GENE 662 705559 - 705774 60 71 aa, chain - ## HITS:1 COG:no KEGG:ECSE_2231 NR:ns ## KEGG: ECSE_2231 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 68 7 73 74 63 51.0 2e-09 MFFRKRSLRRRRLMEFLAYGLILAPAFTAFRIWHGDYVQVDYGELVVNLVVCIAVWRARG NIARIAGESTT >gi|333596726|gb|GL892086.1| GENE 663 705837 - 706241 87 134 aa, chain - ## HITS:1 COG:no KEGG:ECSE_2232 NR:ns ## KEGG: ECSE_2232 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 2 123 39 160 169 149 67.0 4e-35 MSAEPISATATAGVAAGTTGITFATMFPEATPAVMLCSLAGAALYVLSSEDHKLWKQILF ALISFIGGVYCAGTASEIIAALINAALSHLSPPVAVKVSPAIGALAASTVSVTVLLRVLK RSKTGDLPGLKGEE >gi|333596726|gb|GL892086.1| GENE 664 706321 - 706890 135 189 aa, chain - ## HITS:1 COG:no KEGG:DP1715 NR:ns ## KEGG: DP1715 # Name: not_defined # Def: hypothetical protein # Organism: D.psychrophila # Pathway: not_defined # 1 185 34 219 224 154 43.0 2e-36 MEKYLYLSEHSHVDAWVYGGEVPFFKTSKYKDQERKGIFTPDENLIDTSTFDFRPYSNAI FLGDNIINCNVSLTVDGVEIVRDAKVNKWTEDGLVVCFANRRSRFIAKKLEKKACVRVLN VELLKTLIDAHVGSKGEMDFCKYTKSHNRNHFLKSDEDSWQDEFRMFWKDVEPIKLILPP GIAVLEFYR >gi|333596726|gb|GL892086.1| GENE 665 707034 - 707612 394 192 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2613 NR:ns ## KEGG: Ent638_2613 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 192 1 192 192 341 85.0 8e-93 MINPSEVGKYGELVRLRTLESIWVQGKLRMWGRWSYIGGGSGGNMFNQLLASGKITKSAI NDALRRMKKSGITKPELEAYLREILDSKNKTGLAFCSDEEGLMIDGVIAAVLMNEEYRGL YGVIVDRHRLRKSKLQMARELNSKHPDWTFITCRRRIDTWISLAESILYAPLCDAFGTNG DRFKLQSEQESA >gi|333596726|gb|GL892086.1| GENE 666 707625 - 708206 108 193 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2614 NR:ns ## KEGG: Ent638_2614 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 2 193 138 329 329 311 79.0 7e-84 MQNLVKWLLERVNIDLGFSPDHTLSLPEFCWWMVRNDLADLVPESVASKALRIKPEQHSS VMRESDIVPSLSATQVFQEKAKKIVAVRVDPETPESFMLRPKRRRWENEKYTRWVKSQQC SCCNNPADDPHHLIGHGQGGMGTKAHDLFVIPLCRAHHDELHADPVAFEAKYGDQLTLLF RFLDRALAIGVLA >gi|333596726|gb|GL892086.1| GENE 667 708246 - 708470 62 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVITRPAKTNAPRSVAHYRKVTGMPVSVRPLAFKFSLQPGIKATQSTGSLNDPLVNENSL HIGIVSQGLVGFRD >gi|333596726|gb|GL892086.1| GENE 668 708611 - 709267 535 218 aa, chain - ## HITS:1 COG:YPO2100 KEGG:ns NR:ns ## COG: YPO2100 COG3645 # Protein_GI_number: 16122339 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Yersinia pestis # 86 218 133 265 265 163 57.0 3e-40 MSSREIAELVDSRHSNVCVTIERLMKSGVIGGYAAMQYTHPQNQQTYHYYEVNKRDSYVI VAQLCPEFTARLVDRWQELESGAGMIVPQTLPEALRLAADLAEQKQRLSEELAIAAPKAE FVDRYVKATGSMTFRQVAKLLNAKEPEFAMFLIENGIMYRLNRVLTPKSKHIEAGRFEVK TGTTNQTNYAFNQSRFTAKGVRWIGGLWAEYVAKGQIA >gi|333596726|gb|GL892086.1| GENE 669 709352 - 709555 197 67 aa, chain - ## HITS:1 COG:rus KEGG:ns NR:ns ## COG: rus COG4570 # Protein_GI_number: 16128533 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli K12 # 6 58 64 116 120 59 54.0 2e-09 MIEFPPDARRRDIDNYNKALFDALTHAGIWEDDSQVQKMLVEWGPKVPGGRVEISIKKHE PLAGAAA >gi|333596726|gb|GL892086.1| GENE 670 709776 - 710831 114 351 aa, chain - ## HITS:1 COG:RSc0869 KEGG:ns NR:ns ## COG: RSc0869 COG0270 # Protein_GI_number: 17545588 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Ralstonia solanacearum # 5 167 3 165 194 255 73.0 9e-68 MKSSAYYNEIDPYAAQWLRNLIASGHIAPGEVDERSIEDVTPDDLRGFTQCHFFAGIGVW SHSLRLAGWPDDKPVWTGSCPCQPFSAAGKGDGFADERHLWPHFFHLISERRPQHVFGEQ VAAGNANVWFDLVQSDLEGMGYAFGLVPFTSASIGAPHIRERAYWVAESISEQCQKLLSG LAKGNGAEGGRTSAKPSRFCGAGCMAYSNHGISDEGETLRTGRDAVLDGSSANRLGNTNV PRLEGLVRDDSAAGWEGQAGPATEAGVHMRPLEVNGFWRDADWLLCRDGKWRPVEPGTFP LVDGATARLGRVEPGVARVASSNRIGRLKGYGNAINAQAAAEFIRAYLEVV >gi|333596726|gb|GL892086.1| GENE 671 710828 - 711487 367 219 aa, chain - ## HITS:1 COG:all7280 KEGG:ns NR:ns ## COG: all7280 COG4725 # Protein_GI_number: 17233296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Transcriptional activator, adenine-specific DNA methyltransferase # Organism: Nostoc sp. PCC 7120 # 2 197 9 192 210 85 28.0 5e-17 MKYSLIYADPAWLYDNKASNGAAEDHYDTMKLIDMKRLPVWDLAADDAVLAMWFTGTHTR EAIELAEAWGFKVRTMKGFTWVKFNPLAEQHINKALQAGRVEDFYDFLDLLNVQTRMNGG NYTRANTEDLLIATRGNGLERKCASIKQVIYSPLGEHSQKPAEARFRLEKLYGDVPRIEL FSRCGAPGWDHWGNQSESPAVELIPAVAVPMGKSQEREA >gi|333596726|gb|GL892086.1| GENE 672 711487 - 711690 60 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMDKAQGLFEKGLYQRAATVLMDAFNRSKNEEQRLKILIERQRCLSMAPKVKAPSDAWCL AGRARNV >gi|333596726|gb|GL892086.1| GENE 673 711978 - 712931 364 317 aa, chain - ## HITS:1 COG:no KEGG:SeD_A2284 NR:ns ## KEGG: SeD_A2284 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Dublin # Pathway: not_defined # 33 314 27 324 324 170 37.0 8e-41 MSRIFDIVQSMSGQKNVIVLPRPYLLFFKEDQQAHALAAVLNNLVFWSAFGDEDGWFYKT HKELGAEAGELTEDQTERLVKKLVNKYLPGVIETCSRKVNGTPTKHYRIDGDALISLIFP ENNDSAKVRNGKREDAESKPRSCVSQSANNRNLGSRESTESYLYTDFNTELNKQTNKPIC PVAPQPDRDVLITDQAKQVLTHLNQVTSSRYQVSTTSLQNIRARIGEGFTVEDLSLVVDY CNAKWSDDLTMAAYLRPQTLFQPTKFPAYLKSATNWANAGRPARVNGKWEREDGIFKSSF QNTDYSKVPAGFRGANS >gi|333596726|gb|GL892086.1| GENE 674 712915 - 713100 99 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|324112042|gb|EGC06020.1| ## NR: gi|324112042|gb|EGC06020.1| hypothetical protein ERIG_03010 [Escherichia fergusonii B253] # 1 59 15 73 73 90 76.0 3e-17 MRELNRRFRDHYGVPVRVIRWEPETRRVIYLREGYDHECFSPLEQFQRKFTELKDDHEQN L >gi|333596726|gb|GL892086.1| GENE 675 713264 - 713824 188 186 aa, chain - ## HITS:1 COG:no KEGG:EFER_4425 NR:ns ## KEGG: EFER_4425 # Name: ymfL # Def: nucleic acid-binding protein; E14 prophage # Organism: E.fergusonii # Pathway: not_defined # 1 186 37 221 221 188 52.0 1e-46 MTVGIEPEWKVEKQPAWLVAAIRKTIAALPGGYAEAAEILDETQNSLFNRLRAGGDQIFP MGWAMVLQSAAGVSYIADAFSRETDNGIHVPGAVPDDENEEIGLKLAELVGRLGELVNAY RHYIEDGVVDRSEWQSLNDIAYQFRVTLMTFLNLISRVYCLPEMGEARECAAPGPLACRI SGETNA >gi|333596726|gb|GL892086.1| GENE 676 713847 - 714098 135 83 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1042 NR:ns ## KEGG: APECO1_1042 # Name: not_defined # Def: putative regulatory protein # Organism: E.coli_APEC # Pathway: not_defined # 8 79 29 100 108 79 55.0 4e-14 MQEEKLPTLTEAIKEIGVITISSACGCSARSIYKWMKKGCLPRTDFTGETNYAEKIALAS EGKFSKELIKAISRPQKPTDSAV >gi|333596726|gb|GL892086.1| GENE 677 714133 - 714885 323 250 aa, chain + ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 44 249 10 229 231 140 38.0 3e-33 MTELIVHASTPIIELMVQEERARQDFSKRLALACEKAGFQTHGRQAEIAKKMKLTPKAVS KWFNGEAIPRRGKLQDLAALLGTSATYLLGDSSEDGIIKRQANMSSDVYRIDVLDLSVSA GPGNYMLSDYVEVLYAIEFTTEHARSLFGNRPQQDVKVMTVSGDSMAPTLVSGDRLFVDI SVRHFQTDGVYSFVYGRTFHVKRLQMQGDKLAVLSDNPAYEKWYIKEENQDQLYVMGKAL IHESITYNRL >gi|333596726|gb|GL892086.1| GENE 678 715046 - 715294 121 82 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_4543 NR:ns ## KEGG: Rahaq_4543 # Name: not_defined # Def: HicA protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 76 1 78 80 87 58.0 2e-16 MSRKEKLRSRLNALPKDFTWDELVTLLGHYGFKVINGSGSRRKFVNDVKRIVAFHCPHPG NIVKGYVLEEAKSLLDELDSNE >gi|333596726|gb|GL892086.1| GENE 679 715287 - 715745 95 152 aa, chain + ## HITS:1 COG:DRB0141 KEGG:ns NR:ns ## COG: DRB0141 COG4226 # Protein_GI_number: 10957478 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Deinococcus radiodurans # 5 107 4 106 168 92 41.0 2e-19 MNKMLKYKNYCGSVETSLDDMVLHGKIECIADVVTYEADSLPALKRAFEEAVDDYLETCS AIGKQPEKAMSGTFNVRVGENLHKDAYLSAKNQGLNLNEFVKKAIEEKLAIKKEIHFHFE RKNEFVSETLDFSRELRQPGNWHLSVGRGIRH >gi|333596726|gb|GL892086.1| GENE 680 715745 - 716158 208 137 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLENFYFEGFEVISSSFKEINIGEEGFITVNTQDPEVSYEKVDDSNSFKISMLIEAKVRA FSGPRREDPDESDLAFESNAVFTTFFSLSDADAFDEQFVQDNLWYFERFNAIALKLVTEN ILKHTSLSYLPIPWIAG >gi|333596726|gb|GL892086.1| GENE 681 716244 - 716600 222 118 aa, chain + ## HITS:1 COG:no KEGG:ETA_24170 NR:ns ## KEGG: ETA_24170 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 1 118 1 118 118 201 88.0 1e-50 MKKILALVIGVMMLAGCSSRVADLTVASTKNYNLNSNNFVKGARVKAEDSAPVVIFPLGI PNVKTAIDRAIEKNRCSVALSDVVVTQFNHSFLFGKFGFIVEGTEVIDRGQPGCENAN >gi|333596726|gb|GL892086.1| GENE 682 716636 - 716845 98 69 aa, chain - ## HITS:1 COG:no KEGG:ECL_03589 NR:ns ## KEGG: ECL_03589 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 69 1 69 69 86 68.0 4e-16 MDLDDERVSMIVHAMGRAVMDLSLSGQPVTQEAIIEKLELYRRETGNVIGKGVNRDAAEI VREGSQAVK >gi|333596726|gb|GL892086.1| GENE 683 717618 - 717977 212 119 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2622 NR:ns ## KEGG: Ent638_2622 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 62 19 80 135 76 72.0 4e-13 MTNTQNVTELQPRMTREQLIDAARKAAPLLPPAYRGIMTELANRLDYTSVALCQAMAQRR ELAVQNATLREDVASWAKECDRIVERYTKTRTNMHLLEAQRELRELSPIVISQNNEVAL >gi|333596726|gb|GL892086.1| GENE 684 717977 - 718804 617 275 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2623 NR:ns ## KEGG: Ent638_2623 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 270 1 270 344 409 84.0 1e-113 MANSFKQMTRDGTIKRTDTGMFISLDQIHVREGFNKRDDDERTRQADDDLFNYLMNGGSV PPLEVIARDEGGVWVVEGHRRRRCYARCAEAGKPVDRIHIMPFNGSDVQRLARIMTSNNQ LPLSDMEQAAVIQELHNAFNQTTSEIAKLVNKSVPTVEKLLLLSTANHDVQKEVKSGTVS VDVAVDRVKEFGEKAGEVLQKDKASAAAKGKKKVTRSVIAPEISVKKARRLVELISLAGI SDTGVIYLEGLVHAEVVEIVDEHKAIAVQRHGEAS >gi|333596726|gb|GL892086.1| GENE 685 718801 - 719337 211 178 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1333 NR:ns ## KEGG: ECDH10B_1333 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 143 1 128 239 79 47.0 8e-14 MSTLTKEWLLKTIAELEEERDAVPGAVNEDAVMALEAMKRALASLEAEPVAFRSKLKPPS AIGSESWGYTDHRQPDAFELESCVIERLYTAPPAPFVPDEINVLQAANLVLTLGVLDNGI PTVAMKVWNSCRAAMLQGAEQTNYRAIVERIAEIIHGIVTDIDLLTVTVKSMKDKLQK >gi|333596726|gb|GL892086.1| GENE 686 719373 - 719636 102 87 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_1777 NR:ns ## KEGG: Rahaq_1777 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 82 1 82 85 116 70.0 3e-25 MGQLVTLHEWASGPNGFKYPLSNSALNKIAKTKQTYPPALKQGRRWVIDEDARFVGMVGS VDISSSLSDKARQLVEKAINGSSPQKT >gi|333596726|gb|GL892086.1| GENE 687 720070 - 720753 -145 227 aa, chain + ## HITS:1 COG:intE KEGG:ns NR:ns ## COG: intE COG0582 # Protein_GI_number: 16129103 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 227 151 375 375 253 55.0 2e-67 MGQLIRSVLNDVFKEAQHAGEVDPGYNPALAVKNPIAKVKRSRLSIEQWKLIFESAGSLP PCAQNSMLLALVTGQRIGDIVEMKFSDIWDNHLHVTQNKTGMKLAIPLNLRCDAIGLTLA DVISKCRDRVVSPYLIHHVKHHAYGKAGSHVPEKTISRYFKEARDKANITWPKDCTALPP FHEQRSLSSRTYKAQGIDVKTLLGHKTEAMSVMYGDDRGLEWKKVVI >gi|333596726|gb|GL892086.1| GENE 688 720973 - 721473 569 166 aa, chain + ## HITS:1 COG:STM1282 KEGG:ns NR:ns ## COG: STM1282 COG2606 # Protein_GI_number: 16764633 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 165 1 165 172 266 81.0 1e-71 MSDDVTGTTTHQQLISLLTEQGARFRVVAHEAVGKCEAVSEIRGTDLRQGAKALVCKVKG NGVKKHVLAILAADRQADLSLLASHFGALKASLASPAEVDALTGCVFGAIPPFSFHPDLT LVADPLLFERFDEIAFNAGLLEKSVIMDTQDYLRIARPELVPFRKQ >gi|333596726|gb|GL892086.1| GENE 689 721494 - 721616 110 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKAEGIMNDPMFVETLIIASSFFIIAIILIASVLLLENG >gi|333596726|gb|GL892086.1| GENE 690 721883 - 723214 1385 443 aa, chain + ## HITS:1 COG:STM3750 KEGG:ns NR:ns ## COG: STM3750 COG2211 # Protein_GI_number: 16767035 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 2 436 3 438 460 403 50.0 1e-112 MTEIITRKEKISYGLGDMASHIGLDNVIIFLTFYYTDVVGLPAAFVGTMFLLARTADAII DPAMGYIADRTRTRWGKFRPWMLWLALPFGASCLLTYAVPASLDLHGKMIFATVSYTLMM LMYTAINIPYCSMGAVITPDNDARISLQSYRFFLATLGGALSTFFMMPLAEFLGGDDKLL GYRWAMAIMATVAVVMFWICFANTRERIKAPATHNNYLAELRDLLRNDQWRVVAVLVLTN IGFGVIRLGAMMYFVTYYLGSASYFMWMLGAHILGKAAGSALAKRLTQNVSKVQMFGYCS VLAGVLSIALFFAPKSVLILVPMTFIVSTLYQATTTLMWVMMADVADYGEWKQGKRMDGV IFSTFLAVLKLGMAISGAIVGWTLGLSGYVANAPEQTTTAMYCIIALFTVVPGVLSLCAF ATLRWYRLDDSTMQSIHLAKHPV >gi|333596726|gb|GL892086.1| GENE 691 723230 - 725266 2162 678 aa, chain + ## HITS:1 COG:STM0041 KEGG:ns NR:ns ## COG: STM0041 COG1501 # Protein_GI_number: 16763431 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Salmonella typhimurium LT2 # 1 669 1 670 679 861 61.0 0 MSELIQHSNSIEWRFERQILRIEPWGENSLRVRATCSPTFDEALQALLPAAPCQAEIAAE AESLTLRNGNITATLNLKGQLAFYNQRGELLLEEMWRQRSTVGIGASEKSQDKYVSALKL DGREFKPLTGGKYQLTVRFESRPDERIYGMGQYQQPWLDLKGCTLELAQRNSQASVPFMQ SSLGYGLLWNNPSIGEASFAKNQTEWRARVTGEMDYWITAADTVADITRQYVKATGTPPP APAFISGLWQCKLRYRTQQEVLEVAREYRRRNLPLSVMVIDFFHWPNQGTWCFDPVDWPD PKGMVDELREMGIALMVSVWPTVEARSPLYPLMKAKGWLVSSERGVQVNLDFMGNTTFFD ATHPEARKFVWDTVKKNYYDVGIKLFWLDEAEPEYRAYDFDNYRYHAGPVLEVGNRYPRD FAQGFYDGLQANGETDIVNLVRCAWAGSQRFGVLAWSGDVHSSFHAFRNQLAAGLNMGLA GIPWWTTDIGGFQGGNVNDPAFHELLIRWFQWAVFTPVLRMHGYREPQIQPPERYRDGIP QCNSGSPNELWSYGEENYAIMQHWLTVRETLRPYIDALYQQAHRHGDPLMRPLFWHYPQD KQSWACEDQYLFGEDLLVAPVMQAGQRERDVWLPPGNSWIALNGERYAGGEYIRVPAALD TIPVFVREGSPLVGDLVS >gi|333596726|gb|GL892086.1| GENE 692 725373 - 725819 601 148 aa, chain + ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 147 1 147 148 174 89.0 3e-44 MFDPTLLILLALAALGFVSHNTTVAISILVLIIVRVTPLNTFFPWIEKQGLTIGIIILTI GVMAPIASGTLPASTLLHAFVNWKSLVAIAVGVFVSWLGGRGVTLMSSQPSLVAGLLVGT VLGVALFRGVPVGPLIAAGLVSLFIGKT >gi|333596726|gb|GL892086.1| GENE 693 725803 - 726594 698 263 aa, chain - ## HITS:1 COG:STM1279 KEGG:ns NR:ns ## COG: STM1279 COG2207 # Protein_GI_number: 16764630 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 255 1 255 264 327 73.0 2e-89 MYGLGLDGYDPDSQHDAAVAFRIRVVAQEQYIPQHQHRKGQLIMALGGAITCEVANAMLM VPPQYAVWIPGQTPHSNKATPGAQLCLLFVEPGALDLPLRTCTLKISPLVRELVLALADR SREELSLPATGRLVDVLFDELPLQPQEHLQLPVSSHPKIRLMSETMANEPAAWQTLAQWA SHFAMSERNLARLVVKETGLSFRRWRHQLQLIVALQFLIGGKSVQQTAQALGYDSTTAFI TMFRKGLGQTPARYIASLTTSSR >gi|333596726|gb|GL892086.1| GENE 694 726694 - 727881 1086 395 aa, chain + ## HITS:1 COG:ECs2500 KEGG:ns NR:ns ## COG: ECs2500 COG2807 # Protein_GI_number: 15831754 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 392 1 392 393 479 76.0 1e-135 MTTAIQPSGKQGALLVAGILMIATTLRVTFTGVAPLLDTIRQDYGLSTAQTGLLTTLPLL AFALISPLAAGVARRLGMERSLFIALLLICIGIGVRSLPSASLLFIGTAIVGCGIALGNV LLPGLIKRDFPGQVAKLTGAYSLTMGAAAAAGSALIVPLSLGSAGWHGALLMLMFFPLVA LLLWLPQWRNRPAATLTGAGALHNRAIWRSALAWQVTLFLGINSLIYYVIIGWLPAILLS HGYSETQAGSMHGLLQLATAVPGLAIPLILHRLHDQRGIAGLVALMCAVSAAGFWFAPGL AVVWTLVFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSIGYLLAACGPPLMGKIHD TAGDWRIPLLACALAAVVMALCGMLAGRDREITPR >gi|333596726|gb|GL892086.1| GENE 695 727912 - 728619 753 235 aa, chain - ## HITS:1 COG:PA2268_1 KEGG:ns NR:ns ## COG: PA2268_1 COG0504 # Protein_GI_number: 15597464 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Pseudomonas aeruginosa # 4 234 3 234 246 196 44.0 4e-50 MELSPVKTTLRIALVGDYNPDVIAHQAIPLAIDDAAAVLDLTADYDWLATPELTSPEDLV GYDAIWLVPASPYKNTEAAFIAARYARENSIPFLGTCGGFQHALIEYARNVLGWHDAGHA ETDTEGRMVIAPLTCSLVEKTDAIELRNNTLIARAYGKPEIQEGYHCNYGVSPEFASQLE QGDMRVTGWDEQGEIRAAELVTHPFFVITLFQHERAALQGRPVVLVQAMLRAAQG >gi|333596726|gb|GL892086.1| GENE 696 728771 - 729115 347 114 aa, chain + ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 2 114 10 122 122 159 70.0 8e-40 MIQCKRVYEQATSKDGYRILVDRLWPRGIKKSDLAYDEWCKALTPSSELRKAFHSETIDF TAFSEAYRKELAQHQDEGKRLAALARQQTVTLLYGAKNTEQNHARVLADWLRKL >gi|333596726|gb|GL892086.1| GENE 697 729116 - 729421 263 101 aa, chain - ## HITS:1 COG:no KEGG:ECL_02488 NR:ns ## KEGG: ECL_02488 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 98 1 98 101 178 85.0 8e-44 MFQLKPGSMAMIVGARTTAGRRNIGKSVELFGLCQPGQRFVNPVNGVMTQLPATSARALW LVTGDVYAFDNQHGFAFVRPEHLMPLTPDEMPHIVDELAIG >gi|333596726|gb|GL892086.1| GENE 698 729502 - 729756 188 84 aa, chain - ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 4 80 6 80 84 86 64.0 1e-17 MKYLLLALALPLAACSTKTTPPDAPQPPHAIGMANPASVYCLEKGGEQIPVQSPQGVRTE CKLPGGEVIDEWDLYRRDHPQPTR >gi|333596726|gb|GL892086.1| GENE 699 730071 - 731099 1014 342 aa, chain + ## HITS:1 COG:yeaP_1 KEGG:ns NR:ns ## COG: yeaP_1 COG2203 # Protein_GI_number: 16129748 # Func_class: T Signal transduction mechanisms # Function: FOG: GAF domain # Organism: Escherichia coli K12 # 1 167 44 210 210 254 70.0 1e-67 MSDIILARVSETLSTEQSLDSLVRQLLEMLEIVTDMESTYLTKIDINARLQHILYARNSK QMQIPEGFSVPWDETLCKRAIDSDTVFSNEVPERWPECEAAKALGITTYMSVPVHLADGS LYGTLCAASTAQKQFSERGEQVIRLFAGLIGQYIQKESLVLQLREANAALIAHSYTDALT GLPNRRAIFENLTTLFSLARHLNRKVMMAFIDLDDFKRINDQYGHEAGDRFLVQVGRRLT HEQTQDEIIGRLGGDEFLVASLSHGDDGDASTEVNAIKTRLNSRIAGEYGLGNATILYPG ASLGVVIVDPHSTDEDSALRTADLAMYQDKKGKSKTGFVALD >gi|333596726|gb|GL892086.1| GENE 700 731372 - 731620 361 82 aa, chain - ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 100 86.0 5e-22 MGILSWIIFGLIAGILAKWIMPGKDGGGFIVTIILGIVGAVVGGWISTLFGFGRVDGFNF GSFVVAVIGALVVLFIYRKIKS >gi|333596726|gb|GL892086.1| GENE 701 732208 - 733707 830 499 aa, chain + ## HITS:1 COG:PA2200_2 KEGG:ns NR:ns ## COG: PA2200_2 COG4943 # Protein_GI_number: 15597396 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Pseudomonas aeruginosa # 265 485 1 223 239 127 31.0 6e-29 MKKAIAVAIISTFMVVLSLYAVNAIIAEQQKNRQRDLSHTLLSYSEAFTQNIASTLKNTS VQGCDSESLNVYRKLKMRSLYFADVGFIEKGKITCTAFWGKLAHPITLPSEIHKTQNGFS LAQFSQKDFFVGNATIYNHLIIFTSRSAYDKFTPVTANYSLRSSTKDFDRTFFTVTSPTE NLSRLQSLLFTLAVTQCSTRWDLCVTVTHHDAGLASLSHIVMVLLCLFLYFIWVSLTLFS LRLYEDRRSLERTLVKAVKANTISVHFQPVIRVADKKIVGVEVLSRWQDNNHKEVSPELF IPLIKKIGLYNVYYQNMIKKSLAEIAALAAEHQLIISLNVGRTEIEDGKFLAVLRHECLQ NAIPLSLIKIELSENGVSTSAILEEFCEELTSAGVKISIDDFGVQNSNLARLSNLKYDEI KVDKSLVDGINEHYKQDILVIFSDALAKLHKTLVFEGVESETQYQFIAQRYPDALVQGWY FSKSLTRHDLASLLADSAR >gi|333596726|gb|GL892086.1| GENE 702 733712 - 733957 373 81 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1601 NR:ns ## KEGG: ECUMN_1601 # Name: ymjA # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 81 1 81 81 112 79.0 6e-24 MNQDIPLKYYDIVDEYATETAKPVEEAERTPLAHYFQLLLTRLYNNEEISEEAQREMAVQ AEIAEDRIDDIANFLNQWGNE >gi|333596726|gb|GL892086.1| GENE 703 734033 - 735283 1710 416 aa, chain - ## HITS:1 COG:STM1238 KEGG:ns NR:ns ## COG: STM1238 COG0538 # Protein_GI_number: 16764593 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 416 1 416 416 831 97.0 0 MESKVVVPAEGKKITLQNGKINVPHNPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGE RKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQ ELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLR EEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGA FKDWGYQLATEEFGGELIDGGPWQKIKNPNTGKEIIIKDVIADAFLQQILLRPAEYDVIA CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA EMMLRHMEWFEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIANM >gi|333596726|gb|GL892086.1| GENE 704 735431 - 736063 576 210 aa, chain + ## HITS:1 COG:ymfC KEGG:ns NR:ns ## COG: ymfC COG1187 # Protein_GI_number: 16129098 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli K12 # 1 206 1 206 207 344 85.0 6e-95 MKKTSFRKHRVERFSSRQATRRTPEPQPTRVILFNKPYDVLPQFTDEAGRSTLKDFIPVQ GVYAAGRLDRDSEGLLVLTNDGVLQARLTQPGKRTGKIYFVQVEGEPDDASLAKLRNGVT LNDGPTLPAGIERVNEPEWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP TLRLIRYAMGSYTLDSLANGEWRDVTPKEN >gi|333596726|gb|GL892086.1| GENE 705 736063 - 736536 505 157 aa, chain + ## HITS:1 COG:ECs1606 KEGG:ns NR:ns ## COG: ECs1606 COG0494 # Protein_GI_number: 15830860 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 152 1 152 153 258 80.0 3e-69 MFKPHVTVACVVHAQGRFLVVEETINGKALWNQPAGHLEANETLLQAARRELWEETGIRA EPQHFIRMHQWIAPDHTPFLRFLFAVELSEMCATEPHDDDIDRCLWVTAEEILNAPNLRS PLVAESIRCWQSEARLPLDVIAEFNWPFTEGVNGGGA >gi|333596726|gb|GL892086.1| GENE 706 736577 - 737689 1461 370 aa, chain + ## HITS:1 COG:STM1234 KEGG:ns NR:ns ## COG: STM1234 COG0482 # Protein_GI_number: 16764589 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Salmonella typhimurium LT2 # 5 367 19 381 383 701 93.0 0 MSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYKVEGLFMKNWEEDDGEEYCTAAADLADAQ AVCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL GADYIATGHYVRRADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPEVR KIAEDLDLITAKKKDSTGICFIGERKFREFLGRYLPAQPGKIVTVDGDEIGQHQGLMYHT LGQRKGLGIGGTKEGSEDPWYVVDKDVENNILVVAQGHDHPRLMSVGLIAQQLHWVDREP LKGTLRCTVKTRYRQTDIPCTVTALDDDRIDVRFDEPVSAVTPGQSAVFYSGEICLGGGI IEQRLPLPAV >gi|333596726|gb|GL892086.1| GENE 707 737717 - 738346 609 209 aa, chain + ## HITS:1 COG:STM1233 KEGG:ns NR:ns ## COG: STM1233 COG2915 # Protein_GI_number: 16764588 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Salmonella typhimurium LT2 # 1 208 3 210 215 357 93.0 7e-99 MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSVIDLNPGSTLGVFGGSET NLRLGLETLLGVLNASNRQGLNAELTRYTLSLMVLERKLNAAKGAMNTLGDRIAGLQRQL DHFDLQSETLLSAMAGIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRASLLAGIRAAVL WQQVGGGRLQLMFSRHRLTTQAKQILAHC >gi|333596726|gb|GL892086.1| GENE 708 738366 - 739736 1827 456 aa, chain + ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 872 93.0 0 MELSSLTAVSPVDGRYGDKVSALREIFSEYGLLKFRVQVEVRWLQKLAAQTAIKEVPAFD AKANDYLDKIVAEFSEEDAARIKTIERTTNHDVKAVEYFLKEKVESVPALHAVSEFIHFA CTSEDINNLSHALMLSTARKEVVLPYWRKIIDAVKALSVEYRDIPLLSRTHGQPATPSTM GKEMANVAYRMERQYRQLEQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCIARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLANAVLQHMASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQST LKGVSKLEVNRDRLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMK QFIDGLALPEEEKARLKEMTPANYIGRAITMVDELK >gi|333596726|gb|GL892086.1| GENE 709 739824 - 740216 264 130 aa, chain - ## HITS:1 COG:no KEGG:CKO_02909 NR:ns ## KEGG: CKO_02909 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 110 1 110 114 90 35.0 2e-17 MEWKVVETIASPESGTIFCKVETQYGLNYILWLKGDYYVRAGEIITTSNQGILINDRRRR VWIAQAMPFTSIGWMGFRQKNACPGNRQEMDRPCAVDTPCQFRLCPFGLKRYIPESYSTT KNNNLPDGRR >gi|333596726|gb|GL892086.1| GENE 710 740601 - 741272 930 223 aa, chain + ## HITS:1 COG:phoP KEGG:ns NR:ns ## COG: phoP COG0745 # Protein_GI_number: 16129093 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 223 1 223 223 402 94.0 1e-112 MRVLVVEDNALLRHHLKVQLQEMGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGL SLIRRWRSHDVSLPVLVLTAREGWQDKVEVLSAGADDYVTKPFHIEEVAARMQALLRRNS GLASQVISLPPFQVDLSRREFSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYP DAELRESHTIDVLMGRLRKKIQAQYPHDVITTVRGQGYLFELR >gi|333596726|gb|GL892086.1| GENE 711 741273 - 742736 1264 487 aa, chain + ## HITS:1 COG:phoQ KEGG:ns NR:ns ## COG: phoQ COG0642 # Protein_GI_number: 16129092 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 486 1 485 486 813 83.0 0 MKGILRHILPLSLRVRFLLATAAVVLVLSLSYGMVALVGYSVSFDKTTFRLLRGESNLFY TLAKWENNRITVEMPENLNQQSPTLALIYDEKGKLLWAQRDVPWLKKRIRPEWLKTNGFH EIEADLNSTSSLLRDDRALQIKLNEIRAEDDDTEMTHSVAINLYPATLHMPQLTIVVIDT IPVELKRSYMVWNWFVYVLAANLLLVIPLLWVAAWWSLRPIESLAKEVRELEEHHREKLN PETTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVMQSTLRSMRSSKMSV DDAEPVMLEQISRISQQIGYYLHRASMRSGSALLSRELHPVAPLLDNLTSALNKVYQRKG VNISLDISPEISFVGEKNDFMEVMGNLLDNACKYCLEFVEVSARVTDNELHIIVEDDGPG IPRNKREVVFDRGQRADTLRPGQGVGLSVAREIVDQYEGKIETGESLLGGARMEVIFGRQ HPVSNDS >gi|333596726|gb|GL892086.1| GENE 712 742828 - 743949 1225 373 aa, chain + ## HITS:1 COG:ECs1573 KEGG:ns NR:ns ## COG: ECs1573 COG2850 # Protein_GI_number: 15830827 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 372 4 375 376 674 87.0 0 MDYQLTLNWPEFIERYWQKRPVVLKRGISNFIDPISPDELAGLAMENEVDSRLVSHQDGK WQVSHGPFESYDHLGESNWSLLVQAVNNWHEPTAALMRPFRALPDWRMDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKVPMKQHCPHPDLLQVDPFEGIIDEELEPGDILY IPPGFPHEGYSLENSLNYSVGFRAPSVREMISGFADYVLQRELGSYRYSDPDVPARAHPA DILPEELDKLRGMMLDLINEPEHFRQWFGEFISQSRHELDVAPPEPPYQADEIYDALQQG DKLVRLGGLRVLRIGEEVFVNGERLDSPHRPALEAIASHMVLTAETFGDALDDPSFLAML AALVNSGYWFFED >gi|333596726|gb|GL892086.1| GENE 713 744035 - 744526 441 163 aa, chain - ## HITS:1 COG:yafM KEGG:ns NR:ns ## COG: yafM COG1943 # Protein_GI_number: 16128214 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 162 1 162 165 233 67.0 2e-61 MSNYRRHYIPGGTWFFTVNLQNRQSDLLTRHIDSLRSATAMVKRAKPFTINAWVILPEHM HCIWTLPEGDSDFSARWRDIKKTFSRNIEMRHVWQPRFWEHTLRNEQDYRRHMDYVYINP LKHGYVGKVVDWPYSTFHRDVREGLYPADWAGEIEEFAAGERK >gi|333596726|gb|GL892086.1| GENE 714 744627 - 745850 1450 407 aa, chain - ## HITS:1 COG:ECs1572 KEGG:ns NR:ns ## COG: ECs1572 COG2195 # Protein_GI_number: 15830826 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 407 1 407 408 770 91.0 0 MDKLLERFLHYVSLDTQSKPGVRQVPSTEGQWKLLNLLKEQLEAMGLVDVTLSEKGTVMG TLPANIDGDIPAIGFISHVDTSPDFSGKHVNPQIVENYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLKGKNIPHGDIRVAFTPDEEVGKGAK HFDVEAFNAQWAYTVDGGGVGELEYENFNAASVTIKIVGNNVHPGSAKGVMVNALSLAAR IHAEVPAEESPEMTEGYEGFYHLTSIKGTVDSAQMHYIVRDFDRKAFEARKRKMMEIAKK VGKGLHPDCYIELIIEDSYYNMRDKVMEHPHILDIAQQAMRDCDIEPVMKPIRGGTDGSQ LSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAKR >gi|333596726|gb|GL892086.1| GENE 715 746151 - 747236 1087 361 aa, chain + ## HITS:1 COG:ECs1571 KEGG:ns NR:ns ## COG: ECs1571 COG3842 # Protein_GI_number: 15830825 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 361 18 378 378 631 89.0 0 MQLERIRKSFDGKDVISDLNLTINDGEFLTLLGPSGCGKTTVLRLIAGLESVDNGHIHLE NQDITQVPAEDRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPASEIPPRVTEALRMVQL EAFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKL GITFVFVTHDQEEALTMSDRIVVMRDGKIEQDGTPREIYEEPKNLFVASFIGEINIFNAT VIEHLDDRRVRANVEGRECNITVNFAVEKGQKLNVLLRPEDLRVDEIHDTADVEGLIGYV RERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMVINWVESWEVVLADEEH K >gi|333596726|gb|GL892086.1| GENE 716 747220 - 748077 1205 285 aa, chain + ## HITS:1 COG:STM1225 KEGG:ns NR:ns ## COG: STM1225 COG1176 # Protein_GI_number: 16764580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Salmonella typhimurium LT2 # 1 282 1 282 287 448 92.0 1e-126 MKNTSKFQNVVIATIVGWLVLFVFLPNLMIIVTSFLTRDDANFVAMIFTLDNYARLLDPL YFDVLLHSLNMALIATLACLVLGYPFAWFLARLPQKVRPLLLFLLIVPFWTNSLIRIYGL KIFLSTRGYLNEFLLWLGVIETPIRIMFTPSAVIVGLVYILLPFMVMPLYSSIEKLDKPL LEAAKDLGASKLQTFVRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVI KSQFLNIRDWPFGSATSITLTVVMGLMLLVYWRASRLLNKKVDLE >gi|333596726|gb|GL892086.1| GENE 717 748074 - 748865 904 263 aa, chain + ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 257 1 257 264 410 97.0 1e-114 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYGLLMNNDSLLQAA QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LLGVQLGFWSLLFSHITFCLPFVVVTVYARLKGFDVRMLEAAKDLGASEMTILRKIILPL AMPAVAAGWLLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVL SLVLVIASQVIARDKTKSQGTRK >gi|333596726|gb|GL892086.1| GENE 718 748862 - 749896 1564 344 aa, chain + ## HITS:1 COG:STM1222 KEGG:ns NR:ns ## COG: STM1222 COG0687 # Protein_GI_number: 16764577 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Salmonella typhimurium LT2 # 14 344 18 348 348 613 94.0 1e-175 MKKMLAAAALVLGMGAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNET MYAKLKTYKDGAYDLVVPSTYFVDKMRKEGMIQKIDKTKLTNFSNLDPEMLNKPFDPNND YSIPYIWGATAIGVNSDAIDPKTVSSWADLWKPEYKSSLLLTDDAREVFQIALRKLGYSG NTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSAFVARQAGTPLE VVWPKEGGIFWMDSLAIPANAKNVDGAVKLINFLLRPDVAKEVAETIGYPTPNLAARKLL SPEVANDKSLYPDAETISKGEWQNDVGDASRLYEEYYQKLKAGR >gi|333596726|gb|GL892086.1| GENE 719 749931 - 750752 785 273 aa, chain - ## HITS:1 COG:ycfY KEGG:ns NR:ns ## COG: ycfY COG0846 # Protein_GI_number: 16129083 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Escherichia coli K12 # 1 273 1 273 279 470 86.0 1e-132 MLSRRQGRLSRFRKNKRRLRERLRQRIFFRDRMMPEAMDKPRVVVLTGAGISAESGIQTF RAADGLWEEHRVEDVATPEGFARDPALVQAFYNARRRQLQQPEIAPNAAHLALAKLEEAL GDRFLLVTQNIDNLHERAGNHNIIHMHGELLKVRCAWSGQVLDWKEDVLDEDRCHCCQFP SRLRPHVVWFGEMPLGMDEIYSALAMADVFIAIGTSGHVYPAAGFVHEARLQGAHTVELN LEPSQVGSEFEEKHYGLASEVVPAFVDKLLKGL >gi|333596726|gb|GL892086.1| GENE 720 750767 - 751678 259 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 4 256 7 271 319 104 30 2e-20 MYYGFDIGGTKIALGVFDKDLKLQWETRVPTPRESYDQFLTAIAALVAQADERFGVKGSV GIGIPGMPETDDGTLYAANVPAASGKPLRADLSALLERDVRLDNDANCFALSEAWDDEFR RYPLVMGLILGTGVGGGIVINGKPITGRSYITGEFGHIRLPVDALDVVGRDFPLTRCGCG QHGCIENYLSGRGFAWLYEHFYHQKREAPEIITLWEQGDAQAREHVERYLDLLAVCLGNI LTIVDPDLLVIGGGLSNFTAITEQLSGRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH LTD >gi|333596726|gb|GL892086.1| GENE 721 751733 - 752914 1426 393 aa, chain - ## HITS:1 COG:ECs1496 KEGG:ns NR:ns ## COG: ECs1496 COG4591 # Protein_GI_number: 15830750 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 393 22 414 414 664 89.0 0 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEPVNQPWSNWRDA LNKVEKVPGIAAAAPYINFTGLVESGVNLRAIQVKGVNPRQEERLSALPRYVQNGAWANF KAGEQQIIMGKGVADALKVKQGDWVSIMIPNASADHKLQQPKRVRLHVTGILQLSGQLDH SFAMVPLEDARQYLDMSDSVTGIAIKVNDVFNANKLVRDAGSVTNNYVYIKSWIGTYGYM YRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVW YGLLAGLFGSLCGVAIGVVVSLKLTPIINGIEALIGHQFLSGDIYFIDFLPSELHWLDVI YVLVTALLLSLLASWYPARRASRIDPARVLSGQ >gi|333596726|gb|GL892086.1| GENE 722 752977 - 753678 230 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 216 9 210 309 93 30 4e-17 MNKILLQCDNLSKRYQEGTVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT PTEGDVIFSGQPLSKMSSTAKAELRNRELGFIYQFHHLLPDFTALENVAMPLMIGKKKPA EINARASDMLKAVGLGHRGNHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN ADSIFQLLGELNAAQGTAFLVVTHDLQLAKRMGRQLEMRDGRLNAELTLMGAE >gi|333596726|gb|GL892086.1| GENE 723 753671 - 754831 1479 386 aa, chain - ## HITS:1 COG:ECs1494 KEGG:ns NR:ns ## COG: ECs1494 COG4591 # Protein_GI_number: 15830748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 386 14 399 399 640 93.0 0 MRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAVLSSTHG SVNPQQLPESAVKLQGVTRVAPLTTGDVVLQSARSVAVGVMLGIDPAQKDPLTPFLVNVK QTDLEAGKYNVILGEQLAGQLGVNRGDQLRVMVPSASQFTPMGRLPSQRLFNVIGTFAAN SEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLDAPLKVDTLSQQTLPEGTKWQDWRDRK GELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMAV FMVQGASAGIIGALLGAALGALLASQLNNLMPIIGALLDGAALPVAIEPLQVVGIALAAM AIALLSTLYPSWRAAATQPAEALRYE >gi|333596726|gb|GL892086.1| GENE 724 755127 - 756200 1100 357 aa, chain + ## HITS:1 COG:ycfT KEGG:ns NR:ns ## COG: ycfT COG4763 # Protein_GI_number: 16129078 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 348 1 348 357 425 66.0 1e-119 MKQKALWINQIKGLCICLVVIYHSVITFYPHLDGLQHPLSGLLAKCWVYFNLYLAPFRMP VFFFISGYLIRRYIDEVNWRTSLDKRIWSIVWVLALWGVLQWQALTHLNAWLAPERELAT SSNAAYADSVSGFVLGMLTASTSLWYLYALVVYFTLCKLLSRWKLPMLGLLALASIAINF LPLPWWGMNSVVRNMIYYSLGAWYGAQLMAWMKGMDLRHSWLVLIASGAVSVVLWFANVP LPLSLLSIVVIMRLFYSFEQRYAVHPNNLLNVIGSNTIAIYTTHRILIEAFSLLLIREMN AAYWPVWAELTLILVYPFISLLVCTLVGLGARKLSTALFGDLFFSPPARLTPQTATR >gi|333596726|gb|GL892086.1| GENE 725 756346 - 759792 4259 1148 aa, chain + ## HITS:1 COG:STM1216 KEGG:ns NR:ns ## COG: STM1216 COG1197 # Protein_GI_number: 16764571 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Salmonella typhimurium LT2 # 1 1148 1 1148 1148 2130 92.0 0 MPEHYRYSLPVKAGDQRQLGELTGAACATLVAEIAERHPGPVVLVAPDMQNALRLHDEIR QFTDSLVFSLADWETLPYDSFSPHQEIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPH SYLHGHALVMKKGQRLSRDALRVQLDGAGYRHVDQVMEHGEYATRGALLDLYPMGSDRPY RLDFFDDEIDSLRVFDADTQRTLEEVDSINLLPAHEFPTDKTAIELFRSQWRDRFDVKRD AEHIYQQVSKGTLPAGIEYWQPLFFNEPLPALFSYFPANTLIVNTGDIDASASRFESETR ARFENRGVDPMRPLLPPEMLWLRTDELNAELKRWPRMQLKTDSLADKAANTNLAFRTLPD LAVQAQQKSPLDNLRKFLESFTGPVVFSVESEGRREALGELLGRIKVAPKRILRLSEATG NGRYLMIGAAEHGFIDTLNNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHPG QPIVHLEHGVGRYQGMTTLEAGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEDNA PLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKEGYAFKHDKEQYQLFCDSFPFE TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTL LAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQTQILEQASEGKIDILIGTHKLLQSDVKW KDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPP ARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAI GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG EDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV NTRLSFYKRIASAKSEGELEEIKVELIDRFGILPDAARNLLDIARLRQQAQKLGIRKLEG NEKGGVIEFAEKNHVDPMWLIGLLQKQPQHFRLDGPTRLKFTQDLTERKTRMDWVRNFMR QMEENAIA >gi|333596726|gb|GL892086.1| GENE 726 759936 - 760901 910 321 aa, chain + ## HITS:1 COG:STM1215 KEGG:ns NR:ns ## COG: STM1215 COG1376 # Protein_GI_number: 16764570 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 321 1 321 321 520 82.0 1e-147 MMTSSRFTRWLTLFALAATVAVALPARANTWPLPPAGSNVVGENRFHVVENDGGSLEAIA KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTILPDAPRQGIVINLAELRLYYYPPGK NEVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLYRVISPGTKVNI INTPIKVSEEPGGVRLVEIHQPLSKNINDDPQTLPINLNASMVSFKTNANTDGAVMERAM EARSGMPTDVTRHHEVVQQSM >gi|333596726|gb|GL892086.1| GENE 727 760979 - 761236 301 85 aa, chain - ## HITS:1 COG:no KEGG:ECL_02524 NR:ns ## KEGG: ECL_02524 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 85 1 85 85 124 97.0 1e-27 MKNVKTLIAAAVLSSLSFASFAAVEVQSTPADQQKVGTISATAGTNLGSLEDQLAQKADE MGAKSFRITSVTGPNTLHGTAVIYK >gi|333596726|gb|GL892086.1| GENE 728 761482 - 762117 490 211 aa, chain + ## HITS:1 COG:ycfQ KEGG:ns NR:ns ## COG: ycfQ COG1309 # Protein_GI_number: 16129074 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 210 27 236 236 341 80.0 5e-94 MTTDVTRCAKKSRGRPKVFDRDAALDKAMTLFWQHGYEATSLSDLVEATGAKAPTLYAEF TNKEGLFRAVLDRYISRFAAKHEAQLFCEEKSVEQALQDYFTAIASCYTSKDTPAGCFMI NTSATLAASSKEIANTVKSRHAMQEETLSTFLAQRQQRGEIPAHCRPQELARYLSCILQG MSISAREGATLEKLQGITQTTLRLWPELLKL >gi|333596726|gb|GL892086.1| GENE 729 762177 - 762704 552 175 aa, chain - ## HITS:1 COG:STM1212 KEGG:ns NR:ns ## COG: STM1212 COG3134 # Protein_GI_number: 16764567 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 174 5 178 179 280 95.0 1e-75 MLAGIGIGVAAALGVAAVASLNVLDRGPQYAQVVSATPIKETVKTPRQECRNVSVTHRRP VQDENRIAGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQVQGAMQENDTYTT TQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDKDPGTQIPLDGNGQLILNNKV >gi|333596726|gb|GL892086.1| GENE 730 762912 - 764216 1613 434 aa, chain - ## HITS:1 COG:STM1211 KEGG:ns NR:ns ## COG: STM1211 COG1252 # Protein_GI_number: 16764566 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 800 92.0 0 MTTPLKKIVIVGGGAGGLELATQLGKKLGRGKKAKITLVDRNHSHLWKPLLHEVATGSLD EGVDALSYLAHARNHHFQFQLGSVVDINRENKTITLAELRDDKGELLVPERKLAYDTLVM ALGSTSNDFNTPGVKEHCIFLDNPHQARRFHQEMLNLFLKYTNNMGANGKVNIAIVGGGA TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGVRILPALPPRISGAAHNELTKLG VRVLTQTMVTSADEGGLHTKDGEYIQADLMVWAAGIKAPDFMKDIGGLETNRINQLVTEP TLQTTRDPEIFAIGDCASCARPEGGFVPPRAQAAHQMASLVLHNILAQMKGKPMKAYVYK DHGSLVSLSNFSTVGSLMGNLMRGSMMVEGRIARFVYISLYRMHQIALHGYFKTGLMMLV GRINRVIRPRLKLH >gi|333596726|gb|GL892086.1| GENE 731 764453 - 764995 599 180 aa, chain - ## HITS:1 COG:ECs1486 KEGG:ns NR:ns ## COG: ECs1486 COG3150 # Protein_GI_number: 15830740 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 180 20 199 199 363 95.0 1e-100 MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNIDD RPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPNENMEGKIDRPEEYADIATKCVSNFR EKNRDRCLVILSRNDEALNSSRAAELLHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG >gi|333596726|gb|GL892086.1| GENE 732 765027 - 766040 963 337 aa, chain - ## HITS:1 COG:ECs1485 KEGG:ns NR:ns ## COG: ECs1485 COG1472 # Protein_GI_number: 15830739 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli O157:H7 # 1 336 5 340 341 606 89.0 1e-173 MLDVEGFELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVDQE GGRVQRFREGFTRLPAAQSFAALLGTEEGGQLAQDAGWLMASEMIAMDIDISFAPVLDVG HISAAIGERSYHEDPRIALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPHDPR PEADIRAKDMSVFRSLISDNKLDAIMPAHVIYSEVDPRPASGSPHWLKTVLRQELGFNGV IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPINAERVTQLY HKGSFSRQELMDSARWKTVNARLEALNERWQAHKAAL >gi|333596726|gb|GL892086.1| GENE 733 766064 - 766630 573 188 aa, chain - ## HITS:1 COG:ECs1484 KEGG:ns NR:ns ## COG: ECs1484 COG0510 # Protein_GI_number: 15830738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Escherichia coli O157:H7 # 1 187 87 273 274 227 63.0 1e-59 MAVQFIAGEIKSELPDTPTLAAMLYHLHRQPRLGWRVMLLPLLERYWQQAAPERRTPYWL AQLKRLRRAGEPQALRLAPLHMDVHAGNIVHTTAGEKLIDWEYVGDGDVALELAAVWMPD EASREQLVIAYARNANINALTLARQVARWRPWVLMLMAGWFEMRLQQTRDKQFIALANDA WRQLQTKG >gi|333596726|gb|GL892086.1| GENE 734 766869 - 767504 593 211 aa, chain - ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 211 4 213 213 303 82.0 2e-82 MSRYALLSAFALFLAGCVTRTEEPAPVDQAKPGTEQPTTPAQPVPTVPSVPTIPAQPGPI EHPDDTAQPAPRVRHYDWNGAMQPMVGKMLQAQGVTPGSVLLVDSVNNRTNGSLNAGEAT ETLRNALANNGKFTLVSAQQLAVAKQQLGLSPQDSLGSRSKAIGIARNVGAQYVLYSNAT GNVNTPSLQMQLMLVQTGEIIWSGKGAVTQQ >gi|333596726|gb|GL892086.1| GENE 735 767527 - 767901 353 124 aa, chain - ## HITS:1 COG:ycfL KEGG:ns NR:ns ## COG: ycfL COG5633 # Protein_GI_number: 16129067 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli K12 # 17 124 18 125 125 176 81.0 8e-45 MFIGRIAALIVTLVMVGCSARPAIPVSEEQTLVMESSVLAAGITAEKPSLTISEIQSSAS STLYNERQEPVTVHYRFYWYDVRGLEMHPLEAPRSVTIPARSSVTLYGSASYLGAHKVRL YLYL >gi|333596726|gb|GL892086.1| GENE 736 767903 - 768262 412 119 aa, chain - ## HITS:1 COG:YPO1611 KEGG:ns NR:ns ## COG: YPO1611 COG0537 # Protein_GI_number: 16121879 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Yersinia pestis # 1 117 1 117 117 198 85.0 2e-51 MAEETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIIPNILIPTVNDVKTEHEV ALGRMLTVAAKIAEQEGIAEDGYRLIMNCNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL >gi|333596726|gb|GL892086.1| GENE 737 768616 - 770805 2682 729 aa, chain + ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 8 729 8 729 729 784 55.0 0 MSFINHTRDGQRQPAATPSLLAACIAMALTPTTAFAASTTEDTVVVDGGFDNTQDLSASQ DQDYSVKTTTTGTKLLLVPRDIPQSVSVISQQRMADQNLQSIGQVLTNTTGITAQVQDSD RTVFYSRGFFVSNYAYDDLPTSISEVWNFGDTAADTAIYDRIEVVRGATGLMSGTGNPAA YVNMVRKHADSPEFKGNVSASYGSWDKQRYVLDLQAPLVESGKVRGRLITGYQDNDSFVD NYHYRKKFLYGVMDADVTDSTTLSVGYEYQESHTADPTWGGLPTWYSDGSKTHYNRSQTV APDWAYSDKDSTRIFANLTQRFDNGWEAHINGMHAETNFDSKLMYMSGYPDKETGAGLVG YGGWNRGERKQDAVDAFLRGGFDLFGRQHEMMFGGSFSRQRNHYDNSMPDAVYGMVDVGN FKNWSGNIADPQWTLWKLYSKDDIRQSSAYSSARFSLADPLHLILGARYTQYNIRYNPAG SPNTRLESTKDDVTPYAGLVYDINEDWSTYVSYTSIFQPQDKRDASGRYLDPTTGKSYEA GVKADWFNTRLTTSLAIFRIEQDNVASNTYTYMPSGESIYESLDGVVSKGVEFELNGALT DNWQLTFGATRYIAEDKNGNAVSSDQPRTTMKLFTRYQLPMLPELTVGGGVNWQNKVWTD VEGGPAGRSRAEQGSYGLVNLFSRYQVTKDFAVQANVNNLFDKEYYDYVGSYVVYGAPLN VSVSASYDF >gi|333596726|gb|GL892086.1| GENE 738 770947 - 772380 1597 477 aa, chain - ## HITS:1 COG:ptsG_1 KEGG:ns NR:ns ## COG: ptsG_1 COG1263 # Protein_GI_number: 16129064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 395 1 395 397 728 97.0 0 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALASVVAYGIMVKTMAVVAPLVLHLPAEEIAAKHLADTGVLG GIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGTAIQ TFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYIIHAVLAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIV GAGYAVVYYTVFRVLIKALDLKTPGREDATEDSKAGVTSEMAPALVAAFGGKENITNLDA CITRLRVSVADVAKVDQPGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNN >gi|333596726|gb|GL892086.1| GENE 739 772678 - 773472 888 264 aa, chain - ## HITS:1 COG:ECs1478 KEGG:ns NR:ns ## COG: ECs1478 COG0084 # Protein_GI_number: 15830732 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 # 1 264 1 264 265 488 90.0 1e-138 MFLVDSHCHLDGLDYQSLHKNVDDVLAKAAARDVKFCLAVATTLPGYRSMRELVGERDNV VFSCGVHPLNQDEEYDVEDLRRLAAEEGVVAMGETGLDYFYTPETKPRQQESFRNHIRIG RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV TFRNAEQLRDAARYVPLDRILVETDSPYLAPVPHRGKENQPAMTRDVAEYMAVLKGVSIE ELARVTTENFASLFHIDPARLQSV >gi|333596726|gb|GL892086.1| GENE 740 773483 - 774487 794 334 aa, chain - ## HITS:1 COG:ECs1477 KEGG:ns NR:ns ## COG: ECs1477 COG0470 # Protein_GI_number: 15830731 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 447 73.0 1e-125 MKWYPWLRPHFEQLIGSYQVGRGHHALLIQALPGMGDDALIYAITRFLMCQQPEGHKSCG KCRGCQLMQAGTHPDYYTLEPEKGKNTLGIDAVREVSEKLYEYARLGGAKVVWLKDAALL TEAAANALLKTLEEPPENTWFFLSCREPERLLATLRSRCRLHHLAVPQESWALAWLEREV TVSQDAARSALRLCSGAPAAALALLQPEVWSQRETLCRAVESALDSHDWLSVLPALNSDQ AAERLHWLAALLLDALKIQQGATLLTNPDVWTLVTTLANRLSGQSLLAILHDICQSREQL LTVTGLNRELLLTDQLLRIEHYLQPGVIPPVSHL >gi|333596726|gb|GL892086.1| GENE 741 774484 - 775125 888 213 aa, chain - ## HITS:1 COG:tmk KEGG:ns NR:ns ## COG: tmk COG0125 # Protein_GI_number: 16129061 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Escherichia coli K12 # 1 213 1 213 213 341 87.0 5e-94 MRSKYIVIEGLEGAGKTTARNVVVDTLKSLGVADMVFTREPGGTQLAEKLRSLVLDIKSV GDEVITDKAEVLMFYAARVQLVETVITPALAEGKWVIGDRHDLSTQAYQGGGRGIDQTML ATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAGQ DDTIRTIDATQSLEDVTRDIQQAVTQWLQEQQA >gi|333596726|gb|GL892086.1| GENE 742 775115 - 776128 888 337 aa, chain - ## HITS:1 COG:STM1199 KEGG:ns NR:ns ## COG: STM1199 COG1559 # Protein_GI_number: 16764554 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Salmonella typhimurium LT2 # 13 337 16 340 340 580 85.0 1e-165 MLRFVLLLIVALGIAGGAGVWKVRQLADSKILIKDETIFTLKAGTGRQAIGQQLYGDKII NRPRVFQWLLRIEPELSHFKAGTYRFTPGMTVREMLQLLESGKEAQFPLRFVEGMRLSDY LRQLRDAPYIKHTLKDDRYQTVADALKFEHPEWVEGWFWPDTWMYTAGTTDVAILKRAHN KMVAAVEAAWKGRADGLPYKDQNQFMTMASIIEKETAVAAERDQVASVFINRLRIGMRLQ TDPTVIYGMGENYNGRISRKDLETPTAYNTYVISGLPPGPIATPSEASLKAAAHPAKTPY LYFVADGKGGHTFNTNLASHNRSVQDYLKALKEKNAQ >gi|333596726|gb|GL892086.1| GENE 743 776140 - 776949 409 269 aa, chain - ## HITS:1 COG:STM1198 KEGG:ns NR:ns ## COG: STM1198 COG0115 # Protein_GI_number: 16764553 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 269 382 67.0 1e-106 MFLINGLEQETLPASDRATQFGDGCFTTARILNGDVCLPDAHILRLRKACETLLIPFSQW DTLESEMRQLASGKACGVLKVIISRGSGGRGYSGSACLHPTRILSVSDYPSHYARWREEG VVLALSPVRLGRNPMLAGIKHLNRLEQVLIRNHLEQTEAVEALVLDSEGYITECCAANLL WRKGSDVFTPSLEQAGVNGIMRQFCMHQLARGGFRVVEVNAKEEALMVADEVVICNALMP VVPVRAYGHKCWSSRELFQFLAPICEQTR >gi|333596726|gb|GL892086.1| GENE 744 777071 - 778276 1121 401 aa, chain - ## HITS:1 COG:STM1197 KEGG:ns NR:ns ## COG: STM1197 COG0304 # Protein_GI_number: 16764552 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Salmonella typhimurium LT2 # 1 401 13 413 413 689 93.0 0 MLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEEIISRKEQRKMD AFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISP FFVPSTIVNMVAGHLTIMFGLRGPSISIATACTSGVHNIGQAARIIAYGDADAMVAGGAE KASTPLGVGGFGAARALSTRNDNPQAASRPWDKDRDGFVLGDGAGMIVLEEYEHAKKRGA KIYAEVVGFGMSSDAYHMTSPPENGAGAALAMENAIRDAGITPAQIGYVNAHGTSTPAGD KAEAQAVKSIFGESASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP DEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKV >gi|333596726|gb|GL892086.1| GENE 745 778404 - 778640 384 78 aa, chain - ## HITS:1 COG:ECs1472 KEGG:ns NR:ns ## COG: ECs1472 COG0236 # Protein_GI_number: 15830726 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 105 97.0 2e-23 MSTIEERVKKIIGEQLGVKQEEVVNSASFVEDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYINGHQA >gi|333596726|gb|GL892086.1| GENE 746 778795 - 779529 254 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 102 30 7e-20 MSFEGKIALVTGASRGIGRAIAETLVARGATVIGTATSENGAQAISDYLGANGKGLVLNV TEPASIESVLENIRAEFGEVDILVNNAGITRDNLLMRMKDDEWNDIIETNLSSVFRLSKA VMRAMMKKRHGRIITVGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALTDDQRAGTLAAVPAGRLGDPKEIASAVAFLASDEAGYITGETLHVNGG MYMV >gi|333596726|gb|GL892086.1| GENE 747 779542 - 780471 950 309 aa, chain - ## HITS:1 COG:STM1194 KEGG:ns NR:ns ## COG: STM1194 COG0331 # Protein_GI_number: 16764549 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 495 90.0 1e-140 MTQFAFVFPGQGSQTVGMLSEMAANYPVIEETFREASDALGYDLWALTQQGPAEELNKTW QTQPALLAASVALWRVWQQQGGKAPALMAGHSLGEYSALVCAGVIAFADAVRLVELRGKF MQEAVPEGTGGMSAIIGLDDAAIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELEKMTFNAPTISVVNNVDVKCETAP DAIRNALVRQLYSPVQWTKTVEFMASQGVEHLYEVGPGKVLTGLTKRIVDTLTASAINEP EAMKAALSQ >gi|333596726|gb|GL892086.1| GENE 748 780487 - 781440 1035 317 aa, chain - ## HITS:1 COG:ECs1469 KEGG:ns NR:ns ## COG: ECs1469 COG0332 # Protein_GI_number: 15830723 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 575 91.0 1e-164 MYTKILGTGSYLPKQVRTNADLEKMVDTSDEWIVTRTGIRERRIAAPDETVSTMGYEAAQ RALEMAGIDKEQIGLIVVATTSATHAFPSAACQVQNMLGIKGCPAFDVAAACAGFTYALS IADQYVKSGAVKYALVIGADVLARTCDPTDRGTIIIFGDGAGAVLLGQSEEPGIISTHLH ADGRYGELLTLPNADRVNPDSSIYLTMAGNEVFKVAVTELAHIVDETLEANNLDRAALDW LVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCAFDEAVRDGRIKRGQLVL LEAFGGGFTWGSALVRF >gi|333596726|gb|GL892086.1| GENE 749 781447 - 782451 535 334 aa, chain - ## HITS:1 COG:ZplsX KEGG:ns NR:ns ## COG: ZplsX COG0416 # Protein_GI_number: 15801207 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Escherichia coli O157:H7 EDL933 # 1 329 1 329 346 569 93.0 1e-162 MGGDFGPTVTVPAALQALNSNSQLTLLLVGNPDTITPLLAKADFEQRSRLQIIPAQSVIA SDARPSQAIRNSRGSSMRMALELVKEGRAQACVSAGNTGALMGLSKLLLKPIEGIERPAL VTVLPHQQKGKTVVLDLGANVDCDSTMLAQFAVMGSVLAEDVVGINNPRVALLNIGEEET KGLDSIRDAAEILKQVPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFL SLLKSQGEGKKRSWWLILLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGIVIKSHGAANQ RAFTVAIEQAVQAVQRQVPQRIAARLGSVLAKSD >gi|333596726|gb|GL892086.1| GENE 750 782563 - 782736 288 57 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146311260|ref|YP_001176334.1| 50S ribosomal protein L32 [Enterobacter sp. 638] # 1 57 1 57 57 115 98 8e-24 MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGFYRGRKVITK >gi|333596726|gb|GL892086.1| GENE 751 782753 - 783274 419 173 aa, chain - ## HITS:1 COG:ECs1466 KEGG:ns NR:ns ## COG: ECs1466 COG1399 # Protein_GI_number: 15830720 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 300 91.0 1e-81 MQKVKLPLTLDPVRTAQKRLDYEGIYSSDQAERIAESVVSVDSDVECSMSFAIDNQRLAV LTGDAKVTVTLECQRCGKPFVQHVHTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL ALVEDEVILSLPVVPVHDSEHCEVSEADMVFGELPDEAQKPNPFAVLASLKRK >gi|333596726|gb|GL892086.1| GENE 752 783457 - 783999 507 180 aa, chain + ## HITS:1 COG:STM1189 KEGG:ns NR:ns ## COG: STM1189 COG0424 # Protein_GI_number: 16764544 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Salmonella typhimurium LT2 # 2 178 16 192 194 292 81.0 2e-79 MLLEKLGIPFECAAPEVDETPQPGESPRHLVTRLAKEKAQSLAVRYPAHLIIGSDQVCVL DGEITGKPHTEENACQQLLRARGSIVTFYTGLALYNSASGHLQTECEPFDVHFRHLSEQE ILNYVRRERPLNCAGSFKSEGLGIALFDKLDGRDPNTLVGLPLIALCQMLRREECNPLTA >gi|333596726|gb|GL892086.1| GENE 753 784061 - 785008 1051 315 aa, chain - ## HITS:1 COG:STM1187 KEGG:ns NR:ns ## COG: STM1187 COG0564 # Protein_GI_number: 16764542 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Salmonella typhimurium LT2 # 1 314 1 316 319 558 93.0 1e-159 MKTETPAVKMVAIADDEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKL EAGDEVRIPPVRVAEREEEVVSPKLQKVAALSDVILYEDDHILVLNKPSGTAVHGGSGLS FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV RGQWQSHVKVVQAPLLKNILQSGERIVRVNQEGKPSETRFKVEERYEFATLVRCSPVTGR THQIRVHTQFAGHPIAFDDRYGDREFDKQLAGTGLSRLFLHAAALKFTHPNTGEVIRIEA PLDEQLKRCLKVLRG >gi|333596726|gb|GL892086.1| GENE 754 785579 - 788695 3120 1038 aa, chain + ## HITS:1 COG:STM1185 KEGG:ns NR:ns ## COG: STM1185 COG1530 # Protein_GI_number: 16764541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Salmonella typhimurium LT2 # 1 1038 1 1067 1067 1189 75.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPANYNSHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL QWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDEMQ TPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSDEEPAERKLPEQPALATFIMPEAPPE ATLEKPAAKPAVQKAAPAAPTAQPEQPGLLSRIFGALKKMFAGEEVQPEQPKEAPKEAKP ERQQDRRKRQNNRRDRNDRNDRSDRNERRDNRSENNEGREQREDNRRNRREKQQQNVEDR DIRQQAGDESEKSKQRDEQQPRRERNRRRNDEKRQAQQEVKNLNREAPVEQQDTEQEERT QVMPRRKQRQLTQKVRVGAVQAEENDVIAVEAAESTTGTQVAKVDLPAVVENQVEQDESS ENRDNAGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRY PVARPEQAVEEQAVTEEVIAPVAAVEEVVTEAATVVEPQVVETAAPQAVEVETTHPEVIA APVDAAPQIIAEEDTVVAEEVAEEAEPVSVAEETADVAVETVTEEVVQDVEIQVEPVVEE VKAPEVKSEPVEAVAAPAPAHVATAPMTRAPAPEYVPEAPRHSDWVRPDFNFEGKGAAGG HSATHMATAPATRPQPVE >gi|333596726|gb|GL892086.1| GENE 755 788736 - 789689 534 317 aa, chain - ## HITS:1 COG:slr1245 KEGG:ns NR:ns ## COG: slr1245 COG0583 # Protein_GI_number: 16330422 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 12 302 1 289 302 175 32.0 8e-44 MSKIEMKRSERIDRVELMRTFVRIVEAGSLSAAARQLATTQATVSRRLQSLETMLGVRLM LRTTHTTRLTDDGERCYQHARRVIDSWLALEDEVGQTEDEPVGVLRVRAPHAFGQDQLLK PLTEFLQRYPQLSVEWMLNDRSADFLGDNLDCAIRVGAEVDPATVSVLLAEVPRSVVASP ELLARYPAVSTPDDLQQLPWIAISSFYQRHVELFHDASSAPARVTITPRLSTDSLYVARN TALTGLGVAVVSSWTVQDDIQEGRLVHLLPEWQPAALPVHLVYPWSRYYPARLRRFLELM RQIMPEVTGMRKPLQQP >gi|333596726|gb|GL892086.1| GENE 756 789784 - 790998 1438 404 aa, chain + ## HITS:1 COG:RSp0078 KEGG:ns NR:ns ## COG: RSp0078 COG0477 # Protein_GI_number: 17548299 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 4 396 9 396 399 224 41.0 3e-58 MNTTTTTRAVSRWVILMLALGAGFSVASIYYAQPLLPLMGSDLHLSIEGMGLVPTLTQAG YALGILFLLPLGDRHDRRTLILIKSAALALFLLGCSLTGQLHSLLLTSLLIGMAATMAQD IVPAAAILAPEGKQGKTVGTVMTGLLLGILLSRTVSGVVGEAFGWRVMYQLAAASIAFVG VVMWAVLPRFAVHSTLSYPALMRSMEHLWRRYPALRRAALAQGFLSIAFSAFWSTLAVML LERYHLGSAVAGGFGIAGAAGALAAPLAGGLADKLGAGKVTQLGAALVTLSFALMFLMPA LGVHGQLILIALSAVGFDLGLQSSLVAHQNLVYSLEPQARGRLNALLFTVIFIGMALGSA LGSNIYTLAGWSGVVALATLCGAIALAIRVIEGARVLSAQAESV >gi|333596726|gb|GL892086.1| GENE 757 791075 - 792028 940 317 aa, chain - ## HITS:1 COG:STM1184 KEGG:ns NR:ns ## COG: STM1184 COG1344 # Protein_GI_number: 16764540 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 416 77.0 1e-116 MRISTQMMYEQSMRGVTNSQSLWLSYGEQMSTGKRINRPSDDPIAASQAVVLSQAQTQNS QYALARSFATTKVSLEENVLSQVTTAIQAAQEKIVNAGNGTLSDDDRASLATNLQGIRDQ LMNLANSTDGNGRYIFSGYKTEAAAFDQTTGDYKGGGTPISQQVDSARTMQISHTGTEVF TSFTSNAKPEPDGSAPETNLFKILDAAIDALNKPIGDDETKAEAFTAAIDKANRGLSNSL NNVLTVRADLGIKLDELGKLDALGEDRALGQTQQMSNLVDVDWNSVISSYTMQQAALQAS YKAFSDMQGMSLFQMNR >gi|333596726|gb|GL892086.1| GENE 758 792045 - 793685 1654 546 aa, chain - ## HITS:1 COG:flgK KEGG:ns NR:ns ## COG: flgK COG1256 # Protein_GI_number: 16129045 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Escherichia coli K12 # 1 546 1 547 547 654 73.0 0 MSSLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTILGASNSTLTGGGWVGNGVYV SGVQREYDAFITNQLRAAQNQSSGLTTRYQQMSKIDDVLSDTTNSLSANLQDFFKSLQTL VSNAEDPAARQTVLGKADGLVNQFKTNDQYLRDQDAQVNTAISTSVDQINNYAKQIANLN DQISRLTGVGAGASPNELLDQRDQLVSELNKIVGVDVTVQDSGTYNISIANGYTLVQGSN ASQLAAVKSSADPARTTLAYVDATVGNVEISEKQITTGSLGGLLTFRSQDLDQARNTLNQ MALAFADAMNTQHQAGFDANGVKGGKLFDFGSPAVLSNGKNTGSASVTATMTDSTKVQAT NYKVEYNGTDWTITRLSDNTSFTAKPDTGGNLSFDGLNVKISGSANNKDSFIVKPVNDVI VNMDVAISDESKLAMASAQGSGESDNTNGQKLLDLQSAKLVGGNKTFNDAYAALVSTVGS TTASLKTSSETKVNVVTQLTKQQQSISGVNLDEEYGNLQRYQQYYLANAQVLQTASTLFD ALINIR >gi|333596726|gb|GL892086.1| GENE 759 793761 - 794714 1111 317 aa, chain - ## HITS:1 COG:STM1182_1 KEGG:ns NR:ns ## COG: STM1182_1 COG3951 # Protein_GI_number: 16764538 # Func_class: M Cell wall/membrane/envelope biogenesis; N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Rod binding protein # Organism: Salmonella typhimurium LT2 # 1 171 1 170 170 241 80.0 1e-63 MLTDSKLLTSAAWDAQSLNELKTKAGKDPAANIRPVARQVEGMFVQMMLKSMRETLPKDG MFSSDSTRLYTSMYDQQIAQQMTAGKGLGLADMIVKQTAAAQGLPPEETPQQVPLKFDLE KVTSYQNQALTQMVRKAMPKPAETRDEPLSGDSKDFLAQLSLPARLASEESGVPHHLILA QAALESGWGQRQIRRENGEPSFNIFGVKATSSWKGPTTEITTTEYENGAAVKVKAKFRVY SSYLEALSDYVGLLSRNPRYTAVTQAATPEQGAQALQNAGYATDPNYARKLTSMIQQLKS MSEKVSKAYSTDLENLF >gi|333596726|gb|GL892086.1| GENE 760 794715 - 795812 1383 365 aa, chain - ## HITS:1 COG:STM1181 KEGG:ns NR:ns ## COG: STM1181 COG1706 # Protein_GI_number: 16764537 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Salmonella typhimurium LT2 # 1 365 1 365 365 516 91.0 1e-146 MYKFLFAVALTLVATVAQADRIRDLTSVQGVRENSLIGYGLVVGLDGTGDQTTQTPFTTQ SLNNMLSQLGITVPAGTNMQLKNVAAVMVTASYPAFARQGQTIDVVVSSMGNAKSLRGGT LLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAIIERELPTQFG TGNTINLQLNNEDFTMAQQIADTINRSRGYGSATALDARTVQIRTSTGSSNQVRMLADIQ NMEVNVPVQDAKVIINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRSANVSQPDTPFGGG QTVVTPQTQIDLRQSGGSLQSVRSSANLNSVVRALNALGATPMDLMSILQSMQSAGCLRA KLEII >gi|333596726|gb|GL892086.1| GENE 761 795825 - 796523 830 232 aa, chain - ## HITS:1 COG:ECs1457 KEGG:ns NR:ns ## COG: ECs1457 COG2063 # Protein_GI_number: 15830711 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 389 92.0 1e-108 MQKNAAFRYPILTVLAVTLSGCAWIPSKPLVQGATTAQPVPGPAPVVNGSIFQTAQPINY GYQPLFEDRRPRNVGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNA RADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF SGVVNPRTISGTNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM >gi|333596726|gb|GL892086.1| GENE 762 796581 - 797363 923 260 aa, chain - ## HITS:1 COG:STM1179 KEGG:ns NR:ns ## COG: STM1179 COG4786 # Protein_GI_number: 16764535 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 428 98.0 1e-120 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVQLPDGTSAYTRDGSF QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGIVSVTQQGQAAPVQVGQLNLTTFMN DTGLESIGENLYTETQSSGTPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL >gi|333596726|gb|GL892086.1| GENE 763 797375 - 798130 731 251 aa, chain - ## HITS:1 COG:STM1178 KEGG:ns NR:ns ## COG: STM1178 COG4787 # Protein_GI_number: 16764534 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Salmonella typhimurium LT2 # 1 251 1 251 251 385 88.0 1e-107 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS TPGADMTPGQMDYTARPLDVALQQDGWLAVQTADGGEGYTRNGNIQVSATGQLTIQGHPV MGEAGPLTVPEGSELTIAADGTISALNPGDPANTVAPVGRLKLVKAEGNEVQRGDDGMFR LTQAAQATRGATLQADPTIRVMSGVLEGSNVKPVEAMTDMIASARRFEMQMKIISSVDEN ASKANQLLAMS >gi|333596726|gb|GL892086.1| GENE 764 798151 - 799359 1534 402 aa, chain - ## HITS:1 COG:ECs1454 KEGG:ns NR:ns ## COG: ECs1454 COG1749 # Protein_GI_number: 15830708 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Escherichia coli O157:H7 # 1 402 1 401 401 524 83.0 1e-148 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGSASFADMFAGSKVGLGVKVAGITQD FTDGTTTNTGRGLDVAISQNGFFRMVDANGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP VAGTPPTVQTGANPQAISIPTTLMAAKSTTTASQQINLNSTDTAPTVAFDPANPDSYNKK GTVTVFDSQGNAHNMNLFYVKNATPANSWKVYSQDGSVAGSAVTEETTLTFNESGVLTGG GSIDITTGTVPGATPATFAMSFANSMQQNTGANNIVATSQNGYKPGDLVSYQINDDGTVV GNYSNEQTQVLGQIVLANFANNEGLKSEGDNVWSATQSSGVALLGTAGSGNFGTLTNGAL EASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR >gi|333596726|gb|GL892086.1| GENE 765 799386 - 800096 879 236 aa, chain - ## HITS:1 COG:STM1176 KEGG:ns NR:ns ## COG: STM1176 COG1843 # Protein_GI_number: 16764532 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Salmonella typhimurium LT2 # 1 236 1 232 232 280 82.0 1e-75 MSIAVNVNDPTNTGVNSTSSATGSSSLTGSNASDLQSSFLTLLVAQLKNQDPTNPMQNNE LTTQLAQISTVSGIEKLNTTLGSVSGQIDNSQSLQAANLIGHGVMIPGTTILAGTSTTDG TSTTTTTPFGVELQQPADKVTATITDATGAVVRTIDIGELKAGVHTFTWDGSLTDGTKAP NGSYNVAISASSGTTQLVAQPLQFALVQGVIKGSDGNKLDLGTSGTTTLDEVRQII >gi|333596726|gb|GL892086.1| GENE 766 800108 - 800512 433 134 aa, chain - ## HITS:1 COG:ECs1452 KEGG:ns NR:ns ## COG: ECs1452 COG1558 # Protein_GI_number: 15830706 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 216 96.0 8e-57 MALLNIFDIAGSALTAQSKRLNVAASNLANADSVTGPDGQPYRAKQVVFQVDAAPGAATG GVKVADVVESQAPDKLVYEPGNPLADASGYVKMPNVDVVGEMVNSMSASRSYQANVEVLN TVKSMMLKTLTLGQ >gi|333596726|gb|GL892086.1| GENE 767 800516 - 800932 469 138 aa, chain - ## HITS:1 COG:STM1174 KEGG:ns NR:ns ## COG: STM1174 COG1815 # Protein_GI_number: 16764530 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Salmonella typhimurium LT2 # 1 138 1 138 138 218 85.0 2e-57 MLDKLDAALRFQQEALNLRAQRQEILAANIANADTPGYQARDIDFSSELKKVMERGRAEG TGVSLALTSSRHIPAQAMTAPATDLLYRIPDQPSLDGNTVDMDRERTQFADNSLQYQTGL TLLGGQIKGMMTVLQGGN >gi|333596726|gb|GL892086.1| GENE 768 801075 - 801749 383 224 aa, chain + ## HITS:1 COG:STM1173 KEGG:ns NR:ns ## COG: STM1173 COG1261 # Protein_GI_number: 16764529 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Salmonella typhimurium LT2 # 6 224 1 219 219 303 71.0 2e-82 MVERAMRTFKRGLAATLLLLSPLVQAEGLEDQLNTFFAQKLAGFSDDVRVTVRTPPNLYP SCEAPSFSVTGTTRLWGNVNVLARCANEKRYLQVAVQATGNYVVAAVPIPRGSLLQPDSV TLKRGRLDQLPPRTMLDINQAQEAMSLRDVAPGQAIQLSMLRQAWRVKAGQQVMVVANGE GFSINSEGKALNNAAVAQNARVRMSSGQVVSGTVGPDGNILINL >gi|333596726|gb|GL892086.1| GENE 769 801843 - 802136 306 97 aa, chain + ## HITS:1 COG:STM1172 KEGG:ns NR:ns ## COG: STM1172 COG2747 # Protein_GI_number: 16764528 # Func_class: K Transcription; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Negative regulator of flagellin synthesis (anti-sigma28 factor) # Organism: Salmonella typhimurium LT2 # 1 96 1 96 97 100 81.0 6e-22 MSIDRTSALKPVSTVQPRETNEAAPQKTRLEKTSTANSTSVTLSDAQSKLMQPGSSDINM ERVEALKTAIRNGELKMDTSKIADALIQDAQSFLQSN >gi|333596726|gb|GL892086.1| GENE 770 802141 - 802566 422 141 aa, chain + ## HITS:1 COG:STM1171 KEGG:ns NR:ns ## COG: STM1171 COG3418 # Protein_GI_number: 16764527 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis/type III secretory pathway chaperone # Organism: Salmonella typhimurium LT2 # 1 141 1 140 140 187 82.0 4e-48 MSRLSEILDQMTVVLNDLKTVMDAEQHHLSSGQLNGSALQRITEDKSSLLATLDYLEKQR RAEQDAKRSANDEINERWQTITEKTQHLRDLNQHNGWLLEGQIIRNQQALEVLKPYKEPG LYGADGQTATARITGGKKISI >gi|333596726|gb|GL892086.1| GENE 771 802626 - 804161 1045 511 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 407 41 1e-111 MNLLKSLAAVSSMTMFSRVLGFARDAIVARVFGAGMATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSKQGEDATRVFVAYVSGLLTLALAIVTVLGMLAAPWVIMVTAPGFADT ADKFALTTQLLRITFPYILLISLASLVGAILNTWNRFSVPAFAPTFLNVSMIGFALFAAP HFNPPVLALAWAVTVGGVLQLAYQLPHLKKIGMLVLPRINFKDAGAMRVIKQMGPAILGV SVSQISLIINTIFASFLVSGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNH DEYCRLMDWGLRLCFLLALPSAVAMGILAKPLTVSLFQYGKFTAFDAAMTQRALVAYSVG LMGLIVVKVLAPGFYSRQDIKTPVKIAIVTLIMTQLMNLAFIGPLKHAGLSLSIGLAACL NAGLLYWQLRKQDIFTPQPGWASFLLRLVIAVVVMAAALVGMLYVMPDWAQGTMPYRLMR LMAVVAVGVVAYFATLAVLGFKVKEFTRRMV >gi|333596726|gb|GL892086.1| GENE 772 804291 - 805214 890 307 aa, chain - ## HITS:1 COG:STM1169 KEGG:ns NR:ns ## COG: STM1169 COG0673 # Protein_GI_number: 16764525 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 307 1 307 307 509 79.0 1e-144 MTTLRIGVVGLGGIAQKAWLPVLGAASDWTLQGAWSPTREKAERICKTWRIPYAGSLQDL ARECDAVFVHTSTATHYQVVSELMNAGVHVCVDKPLAENVQDAERLIELAARKKLTLMVG FNRRFAPLYQQLKARSGSFASLRMDKHRTDSVGPNDLRFTLLDDYLHVVDTALWLSNGHA QLQSGTLLTNEQGEMVYAEHHFAVEHLQVTTSMHRRAGSQRESVQAVTDGALYDVTDMRE WREEKGSGVVALPVPGWQSTLEQRGFVGCARHFITCVQNQTVPETSGEQAILAQRIVERL WREAMSE >gi|333596726|gb|GL892086.1| GENE 773 805217 - 805867 858 216 aa, chain - ## HITS:1 COG:ECs1445 KEGG:ns NR:ns ## COG: ECs1445 COG3132 # Protein_GI_number: 15830699 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 216 1 215 215 320 80.0 2e-87 MKYQLNGAEARVIGCLLEKQVTTPEQYPLSVNAVTMACNQKTNREPVMNLGEHEVQDILD ELVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAVITTLLLRGAQTPGELRTR ASRMHEFQDMQDVEQTLEGLATREDGPYVVRLAREPGKRESRYMHLFSGDVEPSALAAES DTAASNDSLTARVAALEDEVAGLKQRLDALLAHLGD >gi|333596726|gb|GL892086.1| GENE 774 805878 - 806462 996 194 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 194 1 194 194 388 92 1e-106 MFGYRSNVPKVRLTTDRLVVRLVHERDAWRLADYYAENRQFLKPWEPVRDESHCYPSGWQ ARLSMIAEFHKQGSAFYFALLDPEEKEIVGIANFSNVVRGSFHACYLGYSIGQKWQGQGL MFEALTTAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGEWRDH VLTALTTQDWTAGR >gi|333596726|gb|GL892086.1| GENE 775 806699 - 807907 1397 402 aa, chain + ## HITS:1 COG:STM1166 KEGG:ns NR:ns ## COG: STM1166 COG0477 # Protein_GI_number: 16764522 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 402 1 402 402 635 87.0 0 MSRVSQARSLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAALMVGIALGLRQFVQQ GLGVFGGAIADRFGAKPMIVTGMLLRAAGFATMAIAHEPWLLWFSCFLSGIGGTLFDPPR TALVVKLIRPQHRGRFFSILMMQDSAGAVVGALLGSWLLQYDFRLVCATGAVLFILCALF NGLFLPAWKLSTVKAPVREGLDRVLSDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG TPAAVKWMYAIEACLSLTLLYPIARWSERRFRLEHRLMAGLLLMTLSMMPIGLVSSLQQL FMLICTFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGALGYTGGGWLFDAG KALHQPELPWVMLGMVGFMTLIALWWQFSDKRSTRGMLEPGA >gi|333596726|gb|GL892086.1| GENE 776 808007 - 808567 825 186 aa, chain + ## HITS:1 COG:no KEGG:ECL_02575 NR:ns ## KEGG: ECL_02575 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 186 1 186 186 330 93.0 2e-89 MKKIVIAAALIVSGLLVGCNQLTQYTVSEQEINQALEKHNNFSKDIGVPGLADAHIVLTN LASQIGREEPNKVTLSGDASLDMTSLFGNQKADIKLKLKALPVFNKEKGAIFLQEMEIVD AVVTPDKMKPVLQTLMPYLNQSLQNYFNQQPAYVLSEDKSKGESLAKKYAKGIEVKPGEI IIPFTD >gi|333596726|gb|GL892086.1| GENE 777 808696 - 809742 1026 348 aa, chain + ## HITS:1 COG:pyrC KEGG:ns NR:ns ## COG: pyrC COG0418 # Protein_GI_number: 16129025 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Escherichia coli K12 # 1 348 1 348 348 664 91.0 0 MTVQSQVLKIRRPDDWHIHLRDGDMLKTVVSYTSEIYGRAIVMPNLVPPVTTVEAAIAYR QRILDAVPAGHDFTPLMTCYLTDSLDPNEVERGFNEGVFTAAKLYPANATTNSSHGVTSI DAIMPVLERMQKLGMPLLVHGEVTHADIDIFDREARFIETVMEPLRQRLPGLKVVFEHIT TKDAAEYVRDGNELIAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVA SGFPRAFLGTDSAPHARHRKEASCGCAGCFNAPTALASYATVFEEMNALDHFEAFCSLNG PRFYGLPVNDTFIELERKDSQVEASIALTDDTLIPFLAGETVSWSVKR >gi|333596726|gb|GL892086.1| GENE 778 809817 - 810062 290 81 aa, chain + ## HITS:1 COG:no KEGG:ECL_02577 NR:ns ## KEGG: ECL_02577 # Name: not_defined # Def: DNA damage-inducible protein I # Organism: E.cloacae # Pathway: not_defined # 1 81 1 81 81 137 93.0 2e-31 MRIEVTIAKTTVLPAGALDALAGELSRRINSTFPENDGAVTVRYATANHLSVIGGAKEDK ERISEILQETWESADDWFITD >gi|333596726|gb|GL892086.1| GENE 779 810337 - 810591 274 84 aa, chain + ## HITS:1 COG:no KEGG:ECL_02578 NR:ns ## KEGG: ECL_02578 # Name: not_defined # Def: biofilm formation regulatory protein BssS # Organism: E.cloacae # Pathway: not_defined # 1 84 1 84 84 154 96.0 8e-37 MEKNSDVIQTHPLVGWDISTVDSYDALMLRLHYQTPNQQNRDEAEVGQTLWLTTDVARQF ISILEAGIAKIESGDYQENEYKRH >gi|333596726|gb|GL892086.1| GENE 780 810707 - 811825 1150 372 aa, chain + ## HITS:1 COG:solA KEGG:ns NR:ns ## COG: solA COG0665 # Protein_GI_number: 16129022 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 370 1 371 372 596 75.0 1e-170 MKYDLIIIGSGSVGSAAGYYATQAGLKVLMIDAHLPPHSEGSHHGDTRLIRHAYGEGERY VPLVLRAQTLWDELAALTEERIFERTGIINLGPANSTFLATVEESAKAYHLDVERLDANG IMARWPEISVPEDYIGLFEANSGVLHSETAIKTWIDLAAKAGCAQLFNCPVTGITHHAEG STVTTSEGEYTATRLLVSAGTWVTKLLPDLPIQPVRKVFSWFQSDGRYSSQNKFPAFTGE LPNGDQFYGFPSEKDALKIGKHNGGQVISSAEERKPYGAYAQDGSEAFTFLRNILPGVGG LLYGAACTYDNTPDEDFIIDTLPGHDNILLVTGLSGHGFKFASVLGEIAAQFAQGITPSF DLKPFALSRFNR >gi|333596726|gb|GL892086.1| GENE 781 811876 - 811989 64 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRLVNYLINNIREHFMLYIVLWSLLAIIDVIYIVFF >gi|333596726|gb|GL892086.1| GENE 782 812216 - 812782 557 188 aa, chain + ## HITS:1 COG:ECs1435 KEGG:ns NR:ns ## COG: ECs1435 COG3038 # Protein_GI_number: 15830689 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli O157:H7 # 1 187 1 187 188 262 74.0 3e-70 MQWRNSSSRYGIISMCLHWLFALAVYAMFGLGLWMVTLSYYDGWYHQAPELHKSIGVLLM MGLVFRVIWRHVSPPPSAPKSHGRLTRLGAVGAHLALYALLFAILISGYLISTADGKPIS VFGLFDVPATLADAGSQADTAGVVHLWLAWSVVVLSVLHGLAALKHHFIDKDDTLKRMLG RSSVDSGA >gi|333596726|gb|GL892086.1| GENE 783 812784 - 813362 656 192 aa, chain + ## HITS:1 COG:STM1157 KEGG:ns NR:ns ## COG: STM1157 COG2353 # Protein_GI_number: 16764513 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 338 90.0 5e-93 MKKRLLGIALGSLLFTTGSAIAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFNDFDGTFT FDEKNPAADKVNVTINTNSVDTNHAERDKHLRSAEFLNVGKFPQATFASTEVKKDGDKLA ITGNLTLNGVTKPVTLDAKLMGQGDDPWGGKRAGFEAAGKIHLKDFNITTDLGPASQDVE LIISVEGVQQKS >gi|333596726|gb|GL892086.1| GENE 784 813401 - 814450 1048 349 aa, chain - ## HITS:1 COG:ECs1433 KEGG:ns NR:ns ## COG: ECs1433 COG1054 # Protein_GI_number: 15830687 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 348 1 348 350 665 88.0 0 MPVLHNRVSNEMLKARMLAETEPRTTISFYKYFTIDDPQATRDALYQAFTALNVFGRVYL AREGINAQISVPESKVSAFRELLYGFDPALNGLRLNIALDDDGKSFWVLRMKVRERIVAD GIDDPSFNAANVGEYLKAAEVNAMLDDPDAVFIDMRNHYEYEVGHFENAMEIPADTFREQ LPKAVEMMQEHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISEDVIAHCHQCGTPCDTHTNCKNDGCHLLFIQCPACAEKFN GCCSELCSEESILPEEEQRRRRAGRENGNKIFNKSRGRLNTKLGIPDPE >gi|333596726|gb|GL892086.1| GENE 785 814669 - 815595 876 308 aa, chain + ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 308 1 306 306 504 78.0 1e-143 MTQLPKFTAALLHPRYWLTWSGIGLLWLIVQLPYPVIFRMGKGLGRIAQQVMKRRARIAY RNLELCFPHMSESERHDMVVKNFESVGMGLMETGMAWFWSDKRMARWTEVAGTGMDPVHT LQANQTGVLLIGVHFLTLEIGARMFGMQAPGIGVYRPNDNPVIDLIQTNGRMRSNKSMID RKDLKGMIRALKSGEVVWYAPDHDYGPQSSVFVPFFAVDDAATTTGTWMLARMSKAAIVP FVPRRKPDGSGYQLIMLEPELAPPLIDAETTARWMNGIVEKCIMLAPEQYMWLHRRFKTR PQGVPSRY >gi|333596726|gb|GL892086.1| GENE 786 815737 - 816972 1319 411 aa, chain + ## HITS:1 COG:yceE KEGG:ns NR:ns ## COG: yceE COG0477 # Protein_GI_number: 16129016 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 1 404 408 625 87.0 1e-179 MSPTDAPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSI TFLFSAIASPFWGGLADRKGRKIMLLRSALGMAIIMLLMGVAQNVWQFLILRALLGLLGG FIPNANALIATQIPRQKSGWALGTLSTGGVSGALLGPLAGGLLADHYGLRPVFFITASVL FLCFLVTLICIREHFTPVAKKEMLHARDVLASLKNPKLVLSLFVTTMIIQVATGSIAPIL TLYVRDLAGNVNNIAFISGLIASVPGVAALLSAPRLGKLGDRIGPEKILICALIVSVLLL IPMAMVQTPWQLGVLRFLLGAADGALLPAVQTLLVYNSTNQIAGRIFSYNQSFRDLGNVT GPLVGAGISASFGFRAVFIVTAGVVLFNAVYSWLSLSRALRPGRITQHRDG >gi|333596726|gb|GL892086.1| GENE 787 817052 - 817426 534 124 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1567 NR:ns ## KEGG: Ent638_1567 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 124 1 124 124 173 92.0 2e-42 MTMYATLEEAIDAAREEFLADNPGIEEEDADVQQLNIQKYVLQDGDIMWQAEFFADEGED GECLPILSGEGAQAVFDGDYDEIELRQEWLEENTLHEWDEGEFQLEPPLDTEEGQAAADE WDER >gi|333596726|gb|GL892086.1| GENE 788 817434 - 817661 305 75 aa, chain - ## HITS:1 COG:ECs1428 KEGG:ns NR:ns ## COG: ECs1428 COG5645 # Protein_GI_number: 15830682 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 131 82.0 3e-31 MKVIIVIMMACLLSGCGSIISRTIPGQGHGNQYYPGVQWDVHDSAWRYLTVLDLPFSLIF DTLLLPIDASHGPYE >gi|333596726|gb|GL892086.1| GENE 789 817724 - 820222 2967 832 aa, chain - ## HITS:1 COG:STM1151 KEGG:ns NR:ns ## COG: STM1151 COG2943 # Protein_GI_number: 16764507 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Salmonella typhimurium LT2 # 3 832 13 842 847 1586 94.0 0 MPLTDIEKAALPASDIRAVHTALDGEHRHFSRDDDTPLGSVKARLEQAWPDSLAEGQLIK DDEGRDQLQAMPKATRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLSRLTKEQQASEQKW RTVGTIRRYILLLLTLAQTVVATWYMKTILPYQGWALINPADMIGQDIWVSFMQLLPYIL QSGILLLFAVLFCWVSAGFWTALMGFLQLLMGRDKYSISASTVGDEPLNPEHRTALIMPI CNEDVDRVFAGLRATWESVKATGNAAHFDIYILSDSYNPDICVAEQKAWMELIAEVQGEG QIFYRRRRRRVKRKSGNIDDFCRRWGNQYSYMVVLDADSVMSGDCLSGLVRLMEANPNAG IIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHC ALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRW CHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFL QPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSIILIWCKGSKEYGGFCRVTLSLLLE VLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTPWSEAFMRHGSQLLLGLVWA VGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRSTVGLRTKRWKLFLIPEEYSPPQVLVD TDTYLEQNRKRTLDDGFMHAVFNPSFNALATAMATARHRASQVLEIARDRHVEQALNETP EKLNRDRRLVLLSDPVTMARLHYRVWSAPERYSSWVNYYKDVKLNPLALKAK >gi|333596726|gb|GL892086.1| GENE 790 820245 - 821780 1820 511 aa, chain - ## HITS:1 COG:STM1150 KEGG:ns NR:ns ## COG: STM1150 COG3131 # Protein_GI_number: 16764506 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Salmonella typhimurium LT2 # 1 511 1 511 511 957 90.0 0 MMKMRWLGVAVLLSLYTSSALAFNIDDVAKQAKSMAGKSYEAPKSNLPSVFRDMKYADYQ QIQFNHDKAYWNNIKTPFKLEFYHQGMYFDTPVAINEVTATAVRKIKYSPDYFNFGDVQH DKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLAIDTALP SGEEFPRFREFWIERPKPTDKRLTIYALLDSPRATGAYRFVIMPGRDTVVDVQSKVYLRD KVGKLGVAPLTSMFLFGPNQPSPATNFRPELHDSNGLSIHAGNGEWIWRPLNNPKHLAVS SFAMENPQGFGLLQRGRQFSRFEDLDDRYDLRPSAWVTPKGDWGKGKVELVEIPTNDETN DNIVAYWTPDQLPEAGKEMNFKYAITFSRDEDKLHAPDNAYVMQTRRSTGDVKQSNLIRQ PDGTLAFIVDFTGQDMKKLAPDTAVTAQASIGDNGEIVENAVRYNPVTKGWRLTLRVKVK DPKQTTEMRAALVSNDKPLSETWSYQLPANE >gi|333596726|gb|GL892086.1| GENE 791 822054 - 823193 1186 379 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1563 NR:ns ## KEGG: Ent638_1563 # Name: mdoC # Def: glucans biosynthesis protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 379 1 379 385 587 86.0 1e-166 MSTTPVQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSQLPSWWLTLFNDFIHAFRM QVFFVISGYFSYMLFLRYPLKRWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVKGKAENW PNLSLYEKYNTLVWELISHLWFLLVLVVLTTVSLLIFSQLRQRASTASSTFFGNITHGKL SLLFLALGIAYAAVRRTLFIVYPPILSDGLFNFVVMQTLFYIPFFLIGALAFIHPRLKAL FTTPSPWCAVGAALAFAAYLLNQRYGSGDAWMYETESVITMLMGLWMVNVVFALGHRLLN FKSSRVTYFVNASLFIYLVHHPLTLFFGAYITPHITSNALGFFTGLVFVVGIAIVLYEIH LRIPLLRFLFSGKPQVKAE >gi|333596726|gb|GL892086.1| GENE 792 823235 - 823771 476 178 aa, chain - ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 174 1 174 177 241 66.0 6e-64 MRPQIDVIHGDITTVHVDVIVNAANSSLLGGGGVDGAIHRAAGPQLLEACKTVRQQQGEC PPGHAVITLAGDLPAKAVIHTVGPVWHGGDRHEAEILEQAYRNCLRLAADNGYKTMAFPA ISTGVYGYPKEAAATIAVNTVYHYLSLKPMPEKVIFVCFDEQTADLYQRILTERSQAF >gi|333596726|gb|GL892086.1| GENE 793 823853 - 824173 287 106 aa, chain - ## HITS:1 COG:no KEGG:ECL_02596 NR:ns ## KEGG: ECL_02596 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 106 1 106 106 132 58.0 5e-30 MFKSAASIISGLGLLLSSIFSPAYSATLVNGGVIHFRGAVVADPCEVTPRHQQFAISCPK NNRMETHTISYDEALRGHRTQSDLAAVTMKYLNEKKTLAVVQVDYR >gi|333596726|gb|GL892086.1| GENE 794 824334 - 824666 245 110 aa, chain - ## HITS:1 COG:no KEGG:ECL_02597 NR:ns ## KEGG: ECL_02597 # Name: csgC # Def: curli production protein # Organism: E.cloacae # Pathway: not_defined # 1 106 1 106 110 134 70.0 2e-30 MSTFILLAALASQITFSTSQQENMTTIIPQVTLADACECQVEVLSVREGLVGKSTSRQKN TLFIPANQPIDLSRISFNIRSGDAVKIIVTVSDGKSLYLSQQWTVPMHTH >gi|333596726|gb|GL892086.1| GENE 795 824722 - 825177 404 151 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1216 NR:ns ## KEGG: ECUMN_1216 # Name: csgA # Def: cryptic curlin major subunit # Organism: E.coli_UMN026 # Pathway: not_defined # 1 151 1 151 151 164 80.0 1e-39 MKLIKVAVIAAIVVSGSAFAGAVPQFGGGHGGGWGGGNNGPDSTLSIYQYGGGNSALALQ TDARDSELTITQHGGGNGADVGQGSDDSSIDLLQKGFGNSATIDQWNSKDSVINVKQFGG GNGAAVDQTASGSTVTVHQVGFGNNATAHQY >gi|333596726|gb|GL892086.1| GENE 796 825217 - 825672 258 151 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1557 NR:ns ## KEGG: Ent638_1557 # Name: not_defined # Def: curlin minor subunit # Organism: Enterobacter_638 # Pathway: not_defined # 1 151 1 151 151 211 88.0 5e-54 MKNKTLFMMFTLLGAPGYVIAGDSDLAASEYNFAINELSKASYNQAAIIGQQGSGNNADV RQGGSKLLSVISQEGGNNRANVDQSGTYNLAYIDQTGNGNDASIKQGAFGNTAMIIQKGS GNRANITQYGTQKTAVVVQRQSQMAIRVIQR >gi|333596726|gb|GL892086.1| GENE 797 826418 - 827068 386 216 aa, chain + ## HITS:1 COG:STM1142 KEGG:ns NR:ns ## COG: STM1142 COG2771 # Protein_GI_number: 16764498 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 372 87.0 1e-103 MFNEVHSLPGHTLLLITKPSLQATALLQHLKQCLSLNGKLHNIQRSFDDIAPGSIILLDM MEADKKLIHYWQDNLSRKNNNIRVLLLNTPDEYPFREIESWPHINGVFYVTEEENRVVEG LQGILRGECYFSQKLASYLITHSGNYRYNSSESALLTHREKEILNKLRIGASNIEIARSL FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR >gi|333596726|gb|GL892086.1| GENE 798 827073 - 827462 240 129 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1555 NR:ns ## KEGG: Ent638_1555 # Name: not_defined # Def: curli assembly protein CsgE # Organism: Enterobacter_638 # Pathway: not_defined # 1 129 1 129 129 225 92.0 4e-58 MKRTLSWIAGAGFMLAAGNLQAVEVEVPGLLTDHTVSSVGHDFYRAFSDKWESDYPGNLT INERPSARWGSWITITANQDVIYQTFLFPTKRDFDQNVAFALAQTEEAINRLQLDKALLS TGDLAKDEF >gi|333596726|gb|GL892086.1| GENE 799 827519 - 827905 241 128 aa, chain + ## HITS:1 COG:no KEGG:CKO_02031 NR:ns ## KEGG: CKO_02031 # Name: not_defined # Def: curli assembly protein CsgF # Organism: C.koseri # Pathway: not_defined # 1 128 11 138 138 198 92.0 5e-50 MLIAPLSWAGNMTFQFRNPNFGGNPNNGAFMLNQAQAQNSYKDPSYDDDFGIETPSALDN FTQAIQSQILGGLLTNINTGKPGRMVTNDFIVDIANKDGQLQLNVTDRKTGRTSTIQVSG LQTSSTDF >gi|333596726|gb|GL892086.1| GENE 800 827932 - 828765 948 277 aa, chain + ## HITS:1 COG:ECs1414 KEGG:ns NR:ns ## COG: ECs1414 COG1462 # Protein_GI_number: 15830668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 518 92.0 1e-147 MQRFFILVAVCLLSGCLTAPPKEAAKPTLMPRAQSYRDLTHLPVPTGKIFVSVYNIQDET GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV GVNNRMPLQSLTAANIMVEGSIIGYESNVKSGGAGARYFGIGADTQYQLDQIAVNLRVVN VSTGEILSSVTTSKTILSYEVQAGVFRFIDYQRLLEAEIGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKSDVSNAVLVKYREMSVPPES >gi|333596726|gb|GL892086.1| GENE 801 828809 - 829291 443 160 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1552 NR:ns ## KEGG: Ent638_1552 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 160 15 174 174 249 86.0 2e-65 MNILLCIAITTGILSGLWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLFISGCTLLSG VVWALVIMKGSALAPHVEILGYVMTGIVAFLMCVQAKHLLLSFVPGTFMGACATFAGQGD WKLVVPSVMLGLLFGYAMKNSGLWLAARREKSQNVPAVSK >gi|333596726|gb|GL892086.1| GENE 802 829388 - 829942 725 184 aa, chain - ## HITS:1 COG:ycdY KEGG:ns NR:ns ## COG: ycdY COG3381 # Protein_GI_number: 16128998 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 184 1 184 184 306 83.0 2e-83 MNEFSILCRVLGTLYYRQPQDPLLVPLFTLIREGKLAQSWPLEQDELLERLQKSCDMQQI STDYNALFVGEECRVSPYRSAWQDGATEAEVRAFLSERGMPLTDMPADHIGTLLLAASWI EDNAGDDENEAIETLFETYLLPWVGTFLGKVEAHATSPFWRTLAPLTRDAIAAMWDELEE ENEE >gi|333596726|gb|GL892086.1| GENE 803 829962 - 830699 1021 245 aa, chain - ## HITS:1 COG:ycdX KEGG:ns NR:ns ## COG: ycdX COG1387 # Protein_GI_number: 16128997 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Escherichia coli K12 # 1 245 1 245 245 415 84.0 1e-116 MYPVDLHMHTVASTHAYSNLHDYIAQAKLKGIKLFAITDHGPDMADAPHYWHFVNMRIWP RLVDGIGILRGIEANIKNTDGEIDCTGPMLTSLDLILAGFHEPVFAPQDKETNTAAMIAT IASGNVHIISHPGNPKYPIDIQAVAQAAAEHRVALEINNSSFVHSRKGSEANCREVAAAV RDAGGMVALGSDSHTAFTLGDFSECLKILQDVNFPEEQILNVTPRRMLDFLESRGMAPID EFADL >gi|333596726|gb|GL892086.1| GENE 804 830784 - 831722 1031 312 aa, chain - ## HITS:1 COG:ycdW KEGG:ns NR:ns ## COG: ycdW COG0111 # Protein_GI_number: 16128996 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 312 14 325 325 502 75.0 1e-142 MDIIFYHPTFDTAYWIKALTAALPGARVREWKQGDNEHADYALVWHPPVEMLQGRKLKAV FALGAGVDSILSKLKAHPEMLPEEIPLFRLEDTGMGQQMQEYAVSQVLHWFRRFDDYQAF KQQSHWEPLPDYQREDFTIGILGAGVLGSKVAEALAPWGFPLRCWSRSRKDYPGVESFAG TDELPAFLNGTRVLINLLPNTAETVGIINDALLNQLADDSYLMNLARGVHVVEEDLLKAL DNGKLKGAMLDVYSREPLPTDSPLWAHPRVAMTPHIAAVTRPAEAVAYISHTISEIEKGN AVTGQVNRQRGY >gi|333596726|gb|GL892086.1| GENE 805 832188 - 833093 640 301 aa, chain - ## HITS:1 COG:STM0952 KEGG:ns NR:ns ## COG: STM0952 COG0583 # Protein_GI_number: 16764313 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 301 5 303 303 457 82.0 1e-129 MQDLNDFVWFVKVVEHGGFAAAGRALDQPKSKLSRRIAQLEERLGVRLIQRTTRQFTVTE VGQTFYQHCKAMLVEAEAAEEAVAALQAEPRGMVRITCPVTLLHVHVGPMLARFMARYPG INLQLEATNRRVDLVAEGVDVAIRVRPRPFDDSDLVLRVLADRGHCLVAGPALIERMGNP AMPSELSEWPGLSMGAGKHLHKWELSGPEGAKAEIHFTPRLITTDMLALREAAMAGVGVV QLPILMVKDQLASGELVRVLNTWEPRREVIHAVYPSRRGLLPSVRTLVDFLTDEYARMVE E >gi|333596726|gb|GL892086.1| GENE 806 833203 - 834063 937 286 aa, chain + ## HITS:1 COG:STM0951 KEGG:ns NR:ns ## COG: STM0951 COG1741 # Protein_GI_number: 16764312 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Salmonella typhimurium LT2 # 1 286 1 286 286 478 81.0 1e-135 MKNVTGVYTAPRPHWVGDGFPVRSMFSYQTHGEPLSPFLLLDYAGPHTFPADGAKRGVGE HPHRGFETVTIVYSGEVEHRDSTGRGGVIGPGDVQWMTAGAGILHEEFHSSAFSQKGGEL KMMQLWVNLPAKDKMATPGYQSITKADIPVVTLPDNSGTLRVIAGRFEEVTGPAHTFSPL NVWDLALHQGSHLTLNQPEGWSTALVVVEGSVTVNGTTPAGEAQLVVLSQSGDKLHLEAS SDAKVLLMAGEPLNEPIVGYGPFVMNSKTEIAEAIRDFNSGRFGQI >gi|333596726|gb|GL892086.1| GENE 807 834084 - 834761 921 225 aa, chain + ## HITS:1 COG:STM0950 KEGG:ns NR:ns ## COG: STM0950 COG1335 # Protein_GI_number: 16764311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 371 90.0 1e-103 MSTPANFNGARPVIDVNDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIASLAKIPV ITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNPEFVAAVKATGRKTLIIAGTI TSVCMAFPSISAVADGYKVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVASEIQR TWNREDAGEWAEVYTHIFPAYQLLIESYSKAQDVVKNSEVLDSQR >gi|333596726|gb|GL892086.1| GENE 808 835227 - 836732 765 501 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 447 3 440 456 299 39 4e-79 MNELVSAINGVIWSPALIFLCLGVGLYFSLRSRFLQLRHIKHMITLMFQGRPTEAGVSSF QALTMTLAGRVGTGNIAGVATAITFGGPGALFWMWVVAFLGASSAFVESTLGQVYKEKIN GEYRGGPAFYIEKGLGVKWYAWLFAIVTIFSCGLLLPGVQANSIGASLDIAFGLSPNVTA ALLAVLLSFIIFGGVKRIASFSSMVVPFMALGYIIVACVIIAINIDQLPSVILLIWKSAF GLEAGFGAILGQAIMWGVKRGVYSNEAAQGTGPHASSAAAVSHPVKQGLVQAFSVYIDTL FVCSATGFMLLITGLYNVQGVDGAALYTGIAGVAAGPGYVQTAMESMMPGFGNYFVAIAL FFFAFTTIIAYYYIAETNIAYINRKIHRPWLTFLLKLCLMASTVYGTVRTADLAWGLGDI GVGLMAWLNIIAIVLLHKKAFASLKDYEIQNAQGLDPHFDPVRLGIKNADYWLEERKDEA VANPGQVSSPEGKQPAGKLNS >gi|333596726|gb|GL892086.1| GENE 809 837150 - 837941 690 263 aa, chain - ## HITS:1 COG:ECs1266 KEGG:ns NR:ns ## COG: ECs1266 COG1702 # Protein_GI_number: 15830520 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 262 93 354 354 488 93.0 1e-138 MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVESIGMARDSRDASPIVAR NEAQAHYLNAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVERIIVTRPVLQADEDL GFLPGDISEKFAPYFRPVYDVLVKRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV ILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPSGVKSGLSDAMSRFEEDEMIGV VRFRKEDCVRSALCQRTLEVYSE >gi|333596726|gb|GL892086.1| GENE 810 837920 - 838036 62 38 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291085604|ref|ZP_06571122.1| ## NR: gi|291085604|ref|ZP_06571122.1| protein PhoH [Citrobacter youngae ATCC 29220] protein PhoH [Citrobacter youngae ATCC 29220] # 1 38 61 98 98 73 86.0 5e-12 MAYKEANPLMFVRIIVPKLARVMNTNNSRCYPWEDKKQ >gi|333596726|gb|GL892086.1| GENE 811 838442 - 839725 1488 427 aa, chain - ## HITS:1 COG:ycdB KEGG:ns NR:ns ## COG: ycdB COG2837 # Protein_GI_number: 16128983 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 425 1 421 423 734 84.0 0 MNKHDEYDVAEPTRRRLLKGVGALGGAFALAGGCPVAHAAKPQTAPGTLSPDARMETQPF YGEHQAGILTPQQASMMLVAFDSLASDKADLERLFRLLTTRIAFLTAGGPAPETPNPRLP PMDSGILGAFIAPDNLTITVSVGESLFDDRYGLAKQKPKALQKMTRFPNDSLDAALCHGD LLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPVNLLGFKDG TANPDSSNAALMKNVVWVTADQGEPAWAVGGSYQAVRIIQFHVEFWDRTPLKEQQTIFGR DKHTGAPLGMKNEHDEPDYARDPNGDVIALDSHIRLANPRTKETQSSLMMRRGYSYSLGV TNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYIKPIGGGYFFALPGAHDAGAYL AQGLIEA >gi|333596726|gb|GL892086.1| GENE 812 839729 - 840856 1631 375 aa, chain - ## HITS:1 COG:ECs1264 KEGG:ns NR:ns ## COG: ECs1264 COG2822 # Protein_GI_number: 15830518 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 631 88.0 0 MANQFRRSALCAGIAALFASAFTAQAADIPQVKVTVNDKQCEPMTITVNSGKTQFIIQNH SQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYEMTCGLLTNPKGKLIVKGAAT ADAAKGTALLSLGDAITAYKAYVTKETANLVAGTKAFTDAVKAGDIEKAKSLYAPTRQHY ERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNATKGMEKYADQLN SDVLELQKRITELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVDGAQK IVDLLRPQLQKENGELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITT LAEDLSLLRGVLGLD >gi|333596726|gb|GL892086.1| GENE 813 840897 - 841730 1135 277 aa, chain - ## HITS:1 COG:Z1519 KEGG:ns NR:ns ## COG: Z1519 COG0672 # Protein_GI_number: 15801008 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Escherichia coli O157:H7 EDL933 # 1 276 4 279 279 429 89.0 1e-120 MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWIGVMWVGVFLAAALCLGLGILINETT GEFPQKEQELFEGIVAVIAVFILTWMVFWMRKVSRNVKVQLEQAVDNALQKGNHHGWALI MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAF FKWTSLFILLVAAGLAAGAIRAFHEAGLWNHFQDVAFDLSNVLSTHSLTGTLLEGIFGYQ ETPSVSEVAMYFIYLVPALILFVMPPRTDSQTSRVAP >gi|333596726|gb|GL892086.1| GENE 814 841982 - 843166 1457 394 aa, chain + ## HITS:1 COG:YPO2983 KEGG:ns NR:ns ## COG: YPO2983 COG1972 # Protein_GI_number: 16123164 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Yersinia pestis # 1 394 1 394 394 472 73.0 1e-133 MFKIVHFLLALVIILALAWLVSFDRRKISIRFVLQLIVIEIALAFFFLHAESGLFIIKYV SGFFESLLKFAAEGTNFVFGGMGEKGLAFIFLGVLCPIIFISALIGILQHWRILPIFIRV IGTLLSKLNGMGKLESFNAVSSLILGQSENFIAYKGVLGDLSSRRLFTMAATAMSTVSLS IVGAYMTMLDAKFVVAALILNMFSTFIILSVINPARPEAEPDIKLEKLHESQSFFEMLGE YILAGFKVAMIILAMLIGFIALISAVNALFSSVFGMSFQQILGYVFYPLAWLIGIPLSDA LNAGSIMATKLVANEFVAMIELQKIAHQMSPRGLGILSVFLVSFANFASIGIVAGAIKGL NEQQGNVVSRFGLRLVYGATLVSLLSASFAGLVL >gi|333596726|gb|GL892086.1| GENE 815 843228 - 843647 467 139 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1543 NR:ns ## KEGG: Ent638_1543 # Name: not_defined # Def: putative lipoprotein # Organism: Enterobacter_638 # Pathway: not_defined # 1 139 1 139 139 249 88.0 3e-65 MMIKTGLMAAAFVLLAGCTAPSQNTATDICKADNQMQQTTLYFGLNRPAGAQITGSEWQQ FVDQDVTPRFRDGLTVFDARGQWLGNNGQVAREPSKALMLIHGKDAQSETNIEALRGIYK SRFAQESVMRVDQPVCVQF >gi|333596726|gb|GL892086.1| GENE 816 843720 - 845228 2213 502 aa, chain - ## HITS:1 COG:putP KEGG:ns NR:ns ## COG: putP COG0591 # Protein_GI_number: 16128981 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Escherichia coli K12 # 1 500 1 500 502 847 93.0 0 MAISTPMLVTFLVYIFGMILIGFLAWRSTKNFDDYILGGRSLGPMVTALSAGASDMSGWL LMGLPGAIFISGISESWIAIGLTVGAWINWKLVAGRLRVHTEANNNALTLPDYFTGRFED NSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMNYETALWAGAAATILYTFVGGF LAVSWTDTVQASLMIFALILTPVIVIFTVGGFGESLEVIKQKSIENVDMLKGLNFVAIVS LMGWGLGYFGQPHILARFMAADSHHTIVHARRISMTWMILCLAGACAVGFFGIAYFNNNP AQAGAVNQNAERVFIELAQVLFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA FLRKNASQKELVWVGRFMVLAVALVAISLAANPDNRVLGLVSYAWAGFGAAFGPVVLFSV MWSRMTRNGALAGMIIGAVTVIVWKQFAWLGLYEIIPGFIFGSIGIVVFSLLGKAPSASI QKRFADADAHYHTAPPSKLQAE >gi|333596726|gb|GL892086.1| GENE 817 845651 - 849613 5642 1320 aa, chain + ## HITS:1 COG:putA_2 KEGG:ns NR:ns ## COG: putA_2 COG4230 # Protein_GI_number: 16128980 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli K12 # 526 1320 1 795 795 1375 88.0 0 MGMTTMGVKLDDATRERIKTAATRIDRTPHWLIKQAIFNYLERLESEEGLPELPALLAGA ANESEEAATAVEENHQPFLEFAEQILPQSVSRAAITGAYRRAETDAVPMLLEQARLPEAV AAQAHSLAYQLADKLRNQKTASGRAGMVQSLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWHSHIGRSPSLFVNAATWGLLFTGKLVSTHNEANLSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPFVIDYLIDL ASRSRRRLMIRLVKGAYWDSEIKRAQMEGLEGYPVYTRKVYTDVSYLACAKKLLGVPNLI YPQFATHNAHTLAAIYTLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADTTLPLDELVADPVQAVEKMAAQEGQIGL PHPKIALPRELYGAGRVNSAGLDLANEHRLASLSSALLNSALQKWQAKPILEQSVEDGEM QPVINPAEPKDIVGYVREATEAEVDQALENAVNNAPIWFATPPQERAAILERAAVLMEDQ MQSLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGINILLEAGVPAGVVQLLPGRGETVGA KLTSDNRVRGVMFTGSTEVASLLQRNIATRLDAQGRPTPLIAETGGMNAMIVDSSALTEQ VVVDVLASAFDSAGQRCSALRVLCLQDDVADHTLKMLRGAMAECRMGNPGRLTTDIGPVI DAEAKANIENHIQTMRAKGRPVFQAVRENSEDAREWQTGTFVPPTLIELASFDELKKEVF GPVLHVVRYNRNNLNALIDQINASGYGLTLGVHTRIDETIAQVTGNAKVGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPQNALGVTLARQDAEYPVDAQVKAVLT QPLDALIKWADNRPELRAIARQYGELAQAGTQRLLPGPTGERNTWTLMPRERVLCVADNE QDALVQLAAATATGCEVLWPEDALHRDLAKQLPKAVSARIRFAKADALLAQPFDAVIYHG DSDQLRELCEQVAARSGAIVSVQGFARGETNLLLERLYVERSLSVNTAAAGGNASLMTIG >gi|333596726|gb|GL892086.1| GENE 818 849665 - 850066 531 133 aa, chain + ## HITS:1 COG:STM1123 KEGG:ns NR:ns ## COG: STM1123 COG3755 # Protein_GI_number: 16764480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 130 1 130 131 166 74.0 1e-41 MKRFLIAGAALLLSASALADECDNATTQLELNTCSAQQYQAADKKLNETYQAAIKRAAAP QRDLLKKAQQAWISLRDADCAFIGSGTEGGSVQPMIVNQCLAEKTAEREAFLATLMQCEE GDLSCPLTPALSP >gi|333596726|gb|GL892086.1| GENE 819 850282 - 850920 800 212 aa, chain - ## HITS:1 COG:ECs1259 KEGG:ns NR:ns ## COG: ECs1259 COG1309 # Protein_GI_number: 15830513 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 349 83.0 2e-96 MTQGAVKTPGKRSQAVSAKKQAILSAALETFSQFGIHGTRLEQVAEQAGVSKTNLLYYYP SKEALYVAVMQQILDIWLAPLKAFREELAPLVAIEEYIRLKLEVSRDYPQASRLFCLEML QGAPLLQAELTGDLKQLMDDKSAIIAGWVASGKLAPVDPQHLIFMIWASTQHYADFAAQV EAVTGKTLQNEAFFQSTLQNVQRMIIEGIRVR >gi|333596726|gb|GL892086.1| GENE 820 851166 - 852257 1508 363 aa, chain + ## HITS:1 COG:ECs1258 KEGG:ns NR:ns ## COG: ECs1258 COG2141 # Protein_GI_number: 15830512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 363 20 382 382 712 94.0 0 MKIGVFVPIGNNGWLISTTAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEF WDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMASTIDSISGGRFGVNLVTGW QKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMNDCRVSPQPSV PMKVICAGQSDAGMEFSAKYADFNFCFGKGVNTPAAFAPTAARMKEAADKTGRDVGSYVL FMVIADETDDAARAKWERYKDGADDEALSWLTEQSLKDTRSGADTNVRQMADPTSAVNIN MGTLVGSYASVARMLDEVAAVPGAEGVLLTFDDFLTGVETFGERIQPLMQCRAHIPAVTK EVA >gi|333596726|gb|GL892086.1| GENE 821 852257 - 852946 885 229 aa, chain + ## HITS:1 COG:ycdL KEGG:ns NR:ns ## COG: ycdL COG1335 # Protein_GI_number: 16128977 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli K12 # 1 223 15 237 244 416 89.0 1e-116 MTTLTARPEAITFDAQRSALIVVDMQNAYASKGGYLDLAGFDVSATQPVIENIKTAVSAA RAAGMLIIWFQNGWDDQYVEAGGPGSPNFHKSNALKTMRQRPELQGTLLAKGGWDYQLVD ALVPEPGDIVLPKPRYSGFFNTPLDSLLRSRGIRHLVFTGIATNVCVESTLRDGFFLEYF GVVLEDATHQAGPDFAQKAALFNIETFFGWVSTVNDFCDALDPPLARIA >gi|333596726|gb|GL892086.1| GENE 822 852958 - 853344 492 128 aa, chain + ## HITS:1 COG:ycdK KEGG:ns NR:ns ## COG: ycdK COG0251 # Protein_GI_number: 16128976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 128 1 128 128 227 89.0 4e-60 MPKSVIIPPGTSTPVAPFVPGTLADGVVYVSGTLPFDKDNNVVFIDDPKAQTRHVLETIK TVIETAGGTMEDVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEI ATVAHIAK >gi|333596726|gb|GL892086.1| GENE 823 853352 - 854152 809 266 aa, chain + ## HITS:1 COG:ECs1255 KEGG:ns NR:ns ## COG: ECs1255 COG0596 # Protein_GI_number: 15830509 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 395 77.0 1e-110 MKLSISPPPFAGAPVVVLIAGLGGSGSYWLPQLAMLGQEYQVVCYDQRGTGNNPDTLPED YTLAHMADELTLALSEAGIVRYCVVGHALGALVGLRMAIDKPDALIALVCVNGWLTLHAH TRRCFDVREHLLHAGGAQAWVEAQPLFLYPADWMAARAPRLEAEEALALAHFQGKSNLLR RLHALKQADFSQHAACVRCPVQIICSADDLLVPSVCSAELHATLPHARKTVMRQGGHACN VTEPDTFNTVLLNGLASLLHSPEPAL >gi|333596726|gb|GL892086.1| GENE 824 854162 - 854752 711 196 aa, chain + ## HITS:1 COG:ycdI KEGG:ns NR:ns ## COG: ycdI COG0778 # Protein_GI_number: 16128974 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli K12 # 1 195 1 195 196 337 84.0 6e-93 MSEAITPAALETLFTGARTHNGWLDIPVSDETLREIYDLMKWGPTSANCSPARIVFVRSP EGKEKLRPALSSGNLEKTLSAPVTAIVAWDSEFYERLPELFPHGDARSWFTSSPELAEDT AFRNSSMQAAYLIFACRALGLDTGPMSGFDREKVDAAFFTGTLLKSNLLINIGYGDMSKV YGRLPRLTFEDACGLA >gi|333596726|gb|GL892086.1| GENE 825 854762 - 855256 353 164 aa, chain + ## HITS:1 COG:ECs1253 KEGG:ns NR:ns ## COG: ECs1253 COG1853 # Protein_GI_number: 15830507 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli O157:H7 # 13 164 1 152 152 267 86.0 8e-72 MTTPDQQTFRDAMACVGAAVNIITTDGPAGMAGFTASAVCSVTDSPPTLLVCLNRGASVW PIFSENRTLCVNTLSAGQEPLSNLFGGKTPMEDRFAAARWETGETGCPRLEAALASFDCR ISQVVSVGTHDILFCDIVSIIRHPAPQGLVWFDRGYHALMRPAC >gi|333596726|gb|GL892086.1| GENE 826 855278 - 856600 738 440 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 22 425 8 420 447 288 39 5e-76 MFGLPHWQLKSTSTEAGVVAPDERLPLGQTMVMGVQHAVAMFGATVLMPMLMGLDPNLAI LMSGIGTLLFFFVTGGHVPSYLGSSAAFVGVVIAATGFNGQGINPNLSVALGGIIACGLV YTLTGLVVMKVGTRWIERMMPPVVTGAVVMAIGLNLAPIAVKSVSGSPFESWMAVITVLC IGVVAVFTRGMIQRLLILVGLIAACLVYALLANVFGLGKPVDFTLIHQAAWFGVPQLTSP TFNAQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGS GVTTYAENIGVMAVTKVYSTLVFVAAAVMAMLLGFSPKFGALIHTIPAPVIGGASIVVFG LIAVAGARIWVQNHVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTVGGIGTATFGAILLN ALLSRRMAAAPQGAVVTQDP >gi|333596726|gb|GL892086.1| GENE 827 856659 - 857159 338 166 aa, chain - ## HITS:1 COG:ECs4307 KEGG:ns NR:ns ## COG: ECs4307 COG0454 # Protein_GI_number: 15833561 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 165 8 173 175 229 63.0 2e-60 MLSEGTDYDFGNFDCGEPSLNAFLTDHLVRQHSGRILRGYLLKERDHPRILGYYTLSGSC FEKAMLPSKTQQRRIPYSNVPSVTLGRLAVHKELQGNEWGTTLVTHAMRVVYLASQAVGV HGIFVDALNERAKRFYLKLGFIPLAGENSSSLFFPTQSIERLFEQV >gi|333596726|gb|GL892086.1| GENE 828 857187 - 857399 139 70 aa, chain - ## HITS:1 COG:ECs4308 KEGG:ns NR:ns ## COG: ECs4308 COG4453 # Protein_GI_number: 15833562 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 69 20 88 88 86 72.0 1e-17 MIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWNAVMDAIDNPPEPNERLK RAAKRLRNME >gi|333596726|gb|GL892086.1| GENE 829 857530 - 858435 960 301 aa, chain - ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 16 290 11 291 303 88 27.0 2e-17 MSVSRFTFSIKPQEAILILITMFWGGTFLAVQYAVTMSDPFFFVGLRFATAAIAVALISL KTLRGLTLRELKAGVAIGVAIAMGYSLQTWGLQSISSSKSAFITAMYVPLVPLLQWLCLG RMPGLMSCIGIVLAFIGLILLAGPENNLLALGPGEIITLVGTVAIAAEIILISAWAGKVD VKRVTVVQLATASLVAFATMVPAGESVPPMSTGLIVVALGLGIFSAIIQVTMNWAQRSVS PTRATVIYTGEPVWAGIFGRLAGERLPLLALVGAAFIILGVLVSELKLRKRRNAASDLTA E >gi|333596726|gb|GL892086.1| GENE 830 859113 - 859709 691 198 aa, chain + ## HITS:1 COG:STM1119 KEGG:ns NR:ns ## COG: STM1119 COG0655 # Protein_GI_number: 16764477 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Salmonella typhimurium LT2 # 1 198 1 198 198 334 92.0 5e-92 MAKVLVLYYSMYGHIETMAHAVAEGANRVDGVEVVVKRVPETMQAEAFAKAGGKTQNAPV ATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQ EQTITSTWTTLAHHGMVIVPIGYGAQELFDVSQVRGGTPYGATTIAGGDGSRQPSNEELS IARYQGEYVAGLAKKLNG >gi|333596726|gb|GL892086.1| GENE 831 859728 - 859955 452 75 aa, chain + ## HITS:1 COG:no KEGG:ECL_02632 NR:ns ## KEGG: ECL_02632 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 75 1 75 75 122 98.0 4e-27 MPTQESKAHHVGEWASLRNTSPEIAEAIFEVANYDEKLAEQIWEEGNDEVLVRAFEKTDK DSLFWGEQTIERKNV >gi|333596726|gb|GL892086.1| GENE 832 859988 - 861229 1609 413 aa, chain - ## HITS:1 COG:no KEGG:ECL_02633 NR:ns ## KEGG: ECL_02633 # Name: not_defined # Def: acid glucose-1-phosphate phosphatase precursor # Organism: E.cloacae # Pathway: Glycolysis / Gluconeogenesis [PATH:enc00010]; Microbial metabolism in diverse environments [PATH:enc01120] # 1 413 1 413 413 788 93.0 0 MRKALLAVAVAGTLSVTFGAQAQVTPDGYQLEQVLIMSRHNLRAPLANNGSVLEQSTPKQ WPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKTGECPPADTVYAYANSLQRTVAT AQFFNTGAFPGCDVPVHHQEKMGTMDPTFNPVITDNSPEFREKALKAMESERQKMQLGES YKLLEQMTSYADSPSCKEKKVCSLADAKDTFSADYEKEPGVSGPLKVGNSLVDAFTLQYY EGFPTDQVAWGEIKTDQQWRVLSKLKNGYQDSLFTSTDVAQNVAKPLVKYIDKALVTEQA KAPKITLLVGHDSNIASLLTALDFRPYQLHDQQERTPIGGKIVFQRWHDKNTNQELMKIE YVYQSSDQLRNASVLSLQSPAQRVTLELKGCPVDGNGFCPIDKFNAVMNNAAK >gi|333596726|gb|GL892086.1| GENE 833 861334 - 861918 495 194 aa, chain - ## HITS:1 COG:mll0121 KEGG:ns NR:ns ## COG: mll0121 COG0586 # Protein_GI_number: 13470419 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Mesorhizobium loti # 52 182 25 155 213 62 28.0 5e-10 MNIIKGMLTFYLTGFTSNGEFTGYRESKMAWLDTLLDHFAHYPTHLFALLVIMALSKSTV LVSSVLPPASVMLLAGIAVSQSSMHPALTWLAVVMGATAGSVLNYHIGQLMGHTRLVSRF TAKHADKFLRVQHQLHKNGVLVLFTSRFLAVLRYIVPLAAGMLRLNALKVYAVSLLSACA WAALYVGIVTGISV >gi|333596726|gb|GL892086.1| GENE 834 862222 - 863223 1249 333 aa, chain + ## HITS:1 COG:VC1655 KEGG:ns NR:ns ## COG: VC1655 COG2239 # Protein_GI_number: 15641660 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Vibrio cholerae # 6 330 123 447 451 291 50.0 9e-79 MSYAIHNQNLAFNDSAIAQYMNTDFIVIDISLCVALAREQFFEKLKDDDIPSHIFIEDNG RLAGLIAVRKLLQATDTVQPVKGLMISDFIQLKPEDERADVAGVLAHAGADVVPVVTHGK LVGCLTEREIAHLLEDDVTEDAQLQGATLPLEKPYLETSAFSLWKKRSVWLLLLFVAEAY TSSVIQHFEEALESAIALAFFIPLLIGTGGNSGTQITSTLVRAMALGEVHLRDVGRVLRK EMSTSLMIAATLGLAGCIRAWIMGIGMEITLIVSLTLVCITLWSAIVSSVIPMVLKRCKI DPAVVSAPFIATLIDGTGLIIYFKIAQYTLGLE >gi|333596726|gb|GL892086.1| GENE 835 863730 - 864134 311 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295096289|emb|CBK85379.1| ## NR: gi|295096289|emb|CBK85379.1| Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 134 42 175 175 218 96.0 8e-56 MDFIIAIEQDKLRNKTIQQVKKVKRDYIVLMHEIEANSAVRIDNIIYSSMHFTAHPFQQL MRFYRALRTHSFTRREYDVLKLFHMENHEIAKKLKLSQKTTSTYRVRILEKLNMRSKNIL AMTRIKSAIVDQKL >gi|333596726|gb|GL892086.1| GENE 836 864166 - 865779 1660 537 aa, chain - ## HITS:1 COG:sll0590_2 KEGG:ns NR:ns ## COG: sll0590_2 COG0668 # Protein_GI_number: 16331818 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Synechocystis # 284 533 1 253 264 144 33.0 6e-34 MKKILLAFAFCFAALSAFSSYAAEPRQAPTEQERARTVYIFHQPIVMLQAKFGLTTPEER VLRIRNTLRNFTEADVREPLSVVPVTRYNQQGRLIVMNGKPVMLLTEGDLDEGDDLTLDQ AAQRVLARMEAQRMALRDQYDTGWLALSTVKTAAGLLALMLLCYGAWRSWRWFRRVYRRR IVENRSRVPQSWRRYIGAIEIRLYGILMFLLGLIGFYVWLSWAFSLFPWTRVWGTSLGDW TLRVVQQIALAIVSALPGLTIVLIIFLLTAFILKLLKVVLNQVEAGRLQLPGVHPETVGA TRKLISVAVWLFALSAAWPFLPGANSLAFKGISVFFGLMLTLGSAGVMNHAMSGLVLIYS RALRKGDVIRVADNEGKVSEIGMLATKIITRENYVVTVPNAVVVSGKITNLSALQPDGSL NLTVSVTIGYDTPWRQVHAMLELAAKRAKGIDLTEPPLVRQLGLMDWYIAYELQVRLLPD QSLAVARNELHSQIQDVFNEFNVQIMSPNFVMQPEGSVMVAKENWYPAPAKPPQGEN >gi|333596726|gb|GL892086.1| GENE 837 865953 - 866960 484 335 aa, chain + ## HITS:1 COG:AGl2853 KEGG:ns NR:ns ## COG: AGl2853 COG0614 # Protein_GI_number: 15891537 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 330 13 338 343 293 45.0 3e-79 MRLKKGLFLASLLSMAPAAFAATSWPLTIENCGVTQTFAQAPQRVVTVGQHETELLLALG LEKTIAATSVWFGELPAPLADAGKNLPRLTENSPSFEAVVGQKPELVLAQYHWHIGPQGE VGTREQFASLGINTWISPADCTDKAVTETSNADGARSAPFSLAEITREVTDLATIFDVSA RGEQLNRALTERIEKARARVSAKPLRVVFWFSSSRLNGDPWVAGNYGAPGWISRTLGLKN IIDSHDEWPAVTWEHIARSQPDVIVIAEMSRRLYPADDVAVKEAFLRSDPVTKNMPAVRN NHIIVVPAMSLNPSLRNVDAVELISDRLASFRDEQ >gi|333596726|gb|GL892086.1| GENE 838 867011 - 867988 947 325 aa, chain + ## HITS:1 COG:AGl2856 KEGG:ns NR:ns ## COG: AGl2856 COG0609 # Protein_GI_number: 15891538 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 321 31 339 342 270 55.0 2e-72 MALPLMLVFAASIGDMPVSYASTGKAILNGLGLTAYALPQTEEGIIWEYRMSRAVMAACS GGGLALCGLVLQSILRNPLAEPYLLGISAGASLGAVCVMLLGIGGSVIGVSSGAFVGSCA AFALIMLITNGMSASPSRILLAGIAGTQLFNAMTAYVVSTSANAEQSRSVMFWLLGSLSG VRWPDALLALAVTLAGLLVIFLFSRALDTFTFGDEVSATLGIPVTAVRIVLLLTCAVVTA TMVSAIGAVGFVGLVIPHVTRMLCGPGHRRAIPLTFLIGAHFMILADIVSRTLIVHQVLP IGVVTALVGAPVFVALLYQNRKEHP >gi|333596726|gb|GL892086.1| GENE 839 867985 - 868821 524 278 aa, chain + ## HITS:1 COG:AGl2857 KEGG:ns NR:ns ## COG: AGl2857 COG1120 # Protein_GI_number: 15891539 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 246 17 246 266 198 45.0 8e-51 MNITVAGLTVTRQAQTVLKDIDLDLPSGQIVGLLGPNGSGKSTLLRCLAGLIPRLSERVA LNGTTLGTMPLKTRAQTMAFVPQHAEVDGELTVEEIVRLGRTPYRKTFQRTTREDEAAVE QAIGLMQLTGLRQRRWQFLSGGERQRSQIARALAQQPQVLLLDEPTNHLDIQHQLELMRL VSQLPLTVVVALHDLNLAANYCQRLILLKAGKISATGAPEAVLTPANIEDTWCVKAQVSK ADAGITISYNMGGMAEVWRKSKNPCDIAIAGVSNLAEA >gi|333596726|gb|GL892086.1| GENE 840 869040 - 870668 2080 542 aa, chain - ## HITS:1 COG:STM1746 KEGG:ns NR:ns ## COG: STM1746 COG4166 # Protein_GI_number: 16765090 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 12 542 47 582 582 560 55.0 1e-159 MKPKTRTHFTLSLLTAGILCASTATWAANVPAGTQLADKQELVRNNGSEPASLDPHKVES DVEFNIISDLFDGLVSVSPAGEIQPRLAEKWENKDNTVWTFHLRPGITWSDGTPITAEDI VWSWQRLVDPKTASPYASYPGSMRIVNGADIAEGKKAPESLGVKAINDTTLEVTLTQPNA AFLAMLAHPSLVPIDKVLVGRFGDKWTKPEHFVSSGAYKLSQWVVNERIVAVRNPKYWDN EHTVINKVTYLPISSEAADVNRYKAGEIDIVYTVPINQFAQLKKTLGSELDVSPQLATYY YQFNTTRPPFNDARVRKALNLALDKDIIAGKVLGQGQRPAWLISQTDIGGVKLQNPDYAS WPMDKRIAEAKKLLAEAGFNDSHPLSFNLLYNTSESHQRIAIAASSMWKKNLGVEAKLQN QEWKTMLDTMHTHNFDAVRYAWIADYDDAATFLNTFRTGDSQNTTQYSNPDYDRALANAA KSKTAEERGKFYQEAEDLLGRDVPAIPVYHYVRTHLVKPWVGGFTPDKLGYYYTKDMYIK KH >gi|333596726|gb|GL892086.1| GENE 841 870939 - 871598 955 219 aa, chain + ## HITS:1 COG:yccA KEGG:ns NR:ns ## COG: yccA COG0670 # Protein_GI_number: 16128937 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 219 1 219 219 318 94.0 3e-87 MDRIITSSRDRTSLLSTHKVLRNTYFMLSLTLAFSAITATASTVLMLPSPGLILTLVGMY GLMFLTYKTADKPVGILSAFAFTGFLGYILGPILNAYLSAGMGDVIGMALGGTALVFFCC SAYVLTTRKDMSFLGGMLMAGIVIVLVGMLANIFLQLPALHLAISAVFILISSGAILYET SNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD >gi|333596726|gb|GL892086.1| GENE 842 871687 - 872016 539 109 aa, chain + ## HITS:1 COG:ECs1053 KEGG:ns NR:ns ## COG: ECs1053 COG2920 # Protein_GI_number: 15830307 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Escherichia coli O157:H7 # 1 109 20 128 128 203 92.0 7e-53 MLSFEGKEIETDNDGYLKESSQWSEALAEKIAENEGITLSPEHWEVVRFVREFYLEFNTS PAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI >gi|333596726|gb|GL892086.1| GENE 843 872013 - 872294 353 93 aa, chain - ## HITS:1 COG:STM1083 KEGG:ns NR:ns ## COG: STM1083 COG1254 # Protein_GI_number: 16764442 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Salmonella typhimurium LT2 # 1 93 1 93 93 151 77.0 3e-37 MSNVCTIAWVYGLVQGVGFRYSTQREALQLGLTGYARNMDDGSVEVVACGEADRVEKLVA WLKAGGPRSARVDKVLTEPHQPGREYADFSIRY >gi|333596726|gb|GL892086.1| GENE 844 872388 - 873578 589 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 22 389 21 386 396 231 33 1e-58 MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ IRARVWTFDKEETIDIDFFVRRLQQAQQWREWLAKRDGLDSYRLIAGESDGLPGVTIDRF GNFLVLQLLSAGAEYQRAALISALQTLFPECAIYDRSDVAVRKKEGMELTQGPVTGELPP ALLPIEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRQYVADKRVLNCFSYTGGFAVSALM GGCAQVVSVDTSQEALDVAKQNVELNKLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMD PPKFVENKSQLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMTTDLFQKIIADAAIDA GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM >gi|333596726|gb|GL892086.1| GENE 845 873639 - 873956 385 105 aa, chain + ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 105 18 122 122 181 89.0 3e-46 MIASKFGIGQQVRHTLLGYLGVVVDIDPEYSLDEPSADELAVDAELRAAPWYHVVMEGDD GQPVHTYLAEAQLSGELQDEHPEQPTMDELAQTIRKQLQAPRLRN >gi|333596726|gb|GL892086.1| GENE 846 873989 - 874402 645 137 aa, chain - ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 252 94.0 1e-67 MKENDIVEILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG YATLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLKV VMDRCPAIDIPRLGLAK >gi|333596726|gb|GL892086.1| GENE 847 874401 - 874535 59 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFLLVFFKVYVKADISTTHHLQKYEGKTAEYVYMLVNVIIENF >gi|333596726|gb|GL892086.1| GENE 848 874574 - 875236 478 220 aa, chain + ## HITS:1 COG:ECs1048 KEGG:ns NR:ns ## COG: ECs1048 COG3110 # Protein_GI_number: 15830302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 317 74.0 1e-86 MKTGIASAVVALIMPVCVFATTLRLSTDIDLLVLDGKKVSSSLLRGADSIELDNGPHQVV FRVEKTIRLADNEQQVYISPPLVVSFNTQRISQVNFSLPRLVTEKESLAFDASPRIELVD GDSMPIPVKLDILALTKRPKGTDYEADTEIYNRASRRASLPQFATMMADDSTLLSGVSEL DVLPPQSQTLTEQRLRFWFQNADPDTRARFLQWAKRQPSS >gi|333596726|gb|GL892086.1| GENE 849 875317 - 875775 398 152 aa, chain + ## HITS:1 COG:STM1076 KEGG:ns NR:ns ## COG: STM1076 COG1803 # Protein_GI_number: 16764435 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 275 88.0 2e-74 MELTTRTLPARKHIALVAHDHCKQMLLNWVRRHQPLLQHHALSATGTTGNLIHRETGLEV NAMLSGPMGGDQQVGAQISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNL STADFIIESPQFNDPVEILIPDYPRYLAERLK >gi|333596726|gb|GL892086.1| GENE 850 875830 - 877908 1744 692 aa, chain - ## HITS:1 COG:helD KEGG:ns NR:ns ## COG: helD COG0210 # Protein_GI_number: 16128929 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 9 692 1 684 684 1124 81.0 0 MTSWIRQDMELKATSMGKRLAQHPYDKVVLLNAGVKVSGERHEYLIPFNQLLAIHCKRGL VWGELEFVLPEEKVVRLHGTEWAETQRFHHHLNTRWQQWSQEMSVIAAQVLQQVLDDIAL SNTQQRWLTRQQTAGLQQKIAQALTALPLPVARLEEFDNCRDAWRKCQAWLSDIEKSRMA HNQAWTDAMLTQYADFFSTVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGW LLTTGEAVADQILLLAFGRKAAQEMDERIQARLHTQDISARTFHSLALHIIQQGSKKVPV VSKLENDAQARQALFIKAWRQQCSEKKAQAKGWRQWLEEELHWEVPEGSFWQDEKLARRL GSRLDRWVSLMRTHGGSQAEMIESAPESIRAVFSKRVKLMAPMLKAWKTALKDENAVDFS GLIHQAIIILEKGRFVSPWKHILVDEFQDISPQRAALLSALRAQNKHTSLFAVGDDWQAI YRFSGAQLSLTTAFHHYFGEGDRSDLDTTYRFNSRIGEIANRFIQQNPHQLSKPLNSLTS GDKKAVTLLADDQLEPLLDKLSGYAKPDERILVLARYHHLKPTALEKAATRWPKLQLDFM TIHASKGQQADYVIVVGLKEGSDGFPAPARESVMEEALLPVPEDFPDAEERRLLYVAITR ARHRVWLLFNKEEPSVFVDILKSIDVPVARKP >gi|333596726|gb|GL892086.1| GENE 851 878007 - 878453 548 148 aa, chain + ## HITS:1 COG:YPO1439 KEGG:ns NR:ns ## COG: YPO1439 COG3304 # Protein_GI_number: 16121717 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 146 1 146 148 220 80.0 7e-58 MRTVLNVLNFVLGGFATTLSWLFATLVSVVLIFTLPLTRSCWEITKLSLVPYGNEAVHVD ELEPERKNALMNTGGTLLNILWLIFFGWWLCLMHIFAGIAQCITIIGIPVGIANFKIATI ALWPVGRRVVPVEVAQAAREANARRRFQ >gi|333596726|gb|GL892086.1| GENE 852 878472 - 880634 2208 720 aa, chain + ## HITS:1 COG:STM1073 KEGG:ns NR:ns ## COG: STM1073 COG1289 # Protein_GI_number: 16764432 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 707 1 707 717 1212 85.0 0 MLSPLLRRYTWNSNWLYNVRIFIALCGTAALPWWLNDVKLTIPLTLGVVAGALADLDDRL AGRLRNLVITLVCFFIASASVELLFPWPWLFALGLTVSTSGFILLGGLGQRYATIAFGAL LIAIYTMLGVSLYDQWYQQPVLLLLGAIWYNLLTLTGHLIFPVRALQDNIARSYEQLAHY LELKSRLFDPDIEEDSQAPLYDLALANGQLVATLNQTKASLLTRLRGDRGQRGTRRTLHY YFVAQDIHERASSSHVQYADLREKFRYSDVMFRFQRLLSMQSQACQQLARSILLRTPYQH DPRFERAFSHLDAALDRVQASGTSPEQFKALGFLLNNLRAIDAQLATIESEQAMAMPGND ADNQLADDSLNGFSDMWLRLSRHFTPESALFRHAVRMSLVLCVGYAFIQITGLHHGYWIL LTSLFVCQPNYNATRHRLALRIVGTLVGVAIGLPVLYFVPSVEGQLILIVITGVLFFAFR NVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSFIWPDWRFRNLP RVSDRAMNANCRYLDAILEQYHQGRDNRLAYRIARRDAHNTDAELASVVSNMSTEPRATA EIRETAFRLLCLNHTFTSYISTLGAHREKLTNPGILALLDDAVCYVDDALHHQPADEPRV HQALDELVQRIAHLDPGTDNKAPLVLQQIGLLIALLPEICRLRQQIATWRNDGPVTQAAH >gi|333596726|gb|GL892086.1| GENE 853 880591 - 881217 473 208 aa, chain - ## HITS:1 COG:STM1072 KEGG:ns NR:ns ## COG: STM1072 COG3070 # Protein_GI_number: 16764431 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Salmonella typhimurium LT2 # 1 198 1 198 201 243 58.0 1e-64 MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYC VKNASSFLTLMKRGRPVLLNYYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLK DLPNLTFQIEVLLMEAGITNEEMLRQLGAKTSWLKMRSKNKALSIRVLFALEGAIEGLHE AALPADIRRELTEWFNALPESQGHHSAR >gi|333596726|gb|GL892086.1| GENE 854 881435 - 881944 304 169 aa, chain + ## HITS:1 COG:ZsulA KEGG:ns NR:ns ## COG: ZsulA COG5404 # Protein_GI_number: 15800817 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Escherichia coli O157:H7 EDL933 # 1 169 1 169 169 208 75.0 4e-54 MYTSGYANHLTPFSSAAGNAAQNSIGRVSTGLISEVVYREDQPLLTQLLLLPLLQQLGQQ SRWQLWLTPQQKLSREWVQSAGLPLAKVMQINQLSPCDTVESMVRALRTGNYSVVIGWLP EDLSQEEHLRLTEAAEEGNAMGFIMRPVRGDSYRRGQHPGLKIHSNVYH >gi|333596726|gb|GL892086.1| GENE 855 882301 - 883353 902 350 aa, chain + ## HITS:1 COG:STM1070 KEGG:ns NR:ns ## COG: STM1070 COG2885 # Protein_GI_number: 16764429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Salmonella typhimurium LT2 # 1 350 1 350 350 590 87.0 1e-168 MKKTAIAIAVALAGFATVAQAAPKDNTWYAGGKLGWSQFHDTGWYNSSLNNDGPTHESQL GAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNVNGAFKAQGVQLTAKLGYPVTDDLDVYT RLGGMVWRADSSNSIAGDDHDTGVSPVFAGGVEWAMTRDIATRLEYQWVNNIGDGATVGV RPDNGMLSVGVSYRFGQQEDAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQQ ALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLVSKGIPANKIS PRGMGESNPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIKDVVTQPAA >gi|333596726|gb|GL892086.1| GENE 856 883418 - 883870 540 150 aa, chain - ## HITS:1 COG:STM1069 KEGG:ns NR:ns ## COG: STM1069 COG3120 # Protein_GI_number: 16764428 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 150 1 150 150 234 90.0 3e-62 MKYQQLENLESGWKWKYLVKKHREGELITCYIEASAAQEAVDMLLTLENEPVQVNGWIEK HINPALLNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETVV QLIEDAEHKEKYASQMSTLKNDLQALLGKK >gi|333596726|gb|GL892086.1| GENE 857 884231 - 885817 1439 528 aa, chain + ## HITS:1 COG:STM1068 KEGG:ns NR:ns ## COG: STM1068 COG1067 # Protein_GI_number: 16764427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Salmonella typhimurium LT2 # 1 528 59 586 586 821 76.0 0 MLLKAPEEAEYLTLLGDAMRQLQPKTNAVFGGQYHIAGRDVTFEPATQADGLFAAKGEVI TANWVEAEQLFGCLRQFNGDVSLQPGLVHRANGGVLLISLRTLLAQPLLWMRLKTVVTQQ RFDWVGYDESRPLPVSIPSMPLSLTVVLTGDRESLADFQEMEPELAEQAVYSEYEDNIQI ADADDMAQWCQWVMAVAERFSLPSPAEDAWPGLIREAVRYTGDQETLPLCPLWIGKQLRE VGVISGNGMFTGEQLSQMLAQREWREGYLADRMQDEILLEQILVETEGERIGQINALSVI EFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQ IPFSASLTFEQSYSEVDGDSASMAELCAVISALADVPINQNIAITGSVDQFGRAQPVGGL NEKIEGFFAICQQRGLNGKQGVIIPAPNARHLSLSQAILDAVEQEQFTVWAIEGVEDALP LLTNLVWDGEGQTTLMQTIQERIAQATQQDARHRYPWPLRWLSWFSAN >gi|333596726|gb|GL892086.1| GENE 858 885886 - 886404 839 172 aa, chain + ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 343 99.0 7e-95 MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELD INPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTANDLKVGLFQDTSAF >gi|333596726|gb|GL892086.1| GENE 859 886898 - 887464 576 188 aa, chain - ## HITS:1 COG:STM1065 KEGG:ns NR:ns ## COG: STM1065 COG3009 # Protein_GI_number: 16764424 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 188 1 187 187 301 82.0 3e-82 MKKWLIIAGALVLTACSSGSDNKSYYQLPLSAQSGAQSSASQGSRLLWVEQVAVPDYLAG NGVVYQTSDVQYVIANNNLWASPLDQQLRNTLVANLSSQLPGWVVASQPLGSDQDTLNVN VTGFHGRYDGAVVISGEWLLNHQGQLIKRPFHLELKQQKDGYDEMVKVLAQGWAQEAAAI AREISRLP >gi|333596726|gb|GL892086.1| GENE 860 887461 - 889101 1695 546 aa, chain - ## HITS:1 COG:STM1064 KEGG:ns NR:ns ## COG: STM1064 COG3008 # Protein_GI_number: 16764423 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Salmonella typhimurium LT2 # 1 546 1 546 546 974 88.0 0 MENKSGEAKVQKVRNWSPVWIFPIVTALIGAWILFYHYSHQGPEVTLITTNAEGIEGGKT TIKSRSVDVGVVESATLTDDLTHVEIKARLHAGMEKLLHEDSVFWVVKPQVGREGISGLG TLLSGAYIELQPGNKGVQPANYQLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRG YRVGSVETSTFDPQKRTISYQLFINAPNDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSL TTLFGGGVSFDVPEGLDLGQPVAEKTAFRLFDDQKSIQDALYTDHIDYLMFFKDSVRGLQ PGAPVEFRGIRLGTVGQVPYFVPGLKQMLDDDYRIPVLIRIEPERLLNQIGEDQDIGEHI TDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAPPMTGIREFGGYKIIPTVSSGLAQIQQR LMETLDKINNLPLNPMLEAATGSLRQSQATMQRLQATLDNINKITANQSMQQLPQDMQKT LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE PKRAKQ >gi|333596726|gb|GL892086.1| GENE 861 889106 - 890359 839 417 aa, chain - ## HITS:1 COG:pqiA KEGG:ns NR:ns ## COG: pqiA COG2995 # Protein_GI_number: 16128917 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli K12 # 1 416 1 416 417 695 85.0 0 MCDQHHADRHILCSQCDMLVALPELGHGHKAACPRCGATLTTEWDAPRQRPTAYALAALF MLLLSNLFPFIYMKVGGMTSQVDLLEIPGVMFSVDYASLGTFFLLFVQIVPAFCLVVILL LVNRVRMPTVLKIKLARILFQLKSWGMAEIFLAGILVSFVKLMAYGDVGIGSSFIPWCLY CVLQLRAFQCVDRRWAWDDIAPAPTLSQTVKVGVPGIRQGLRSCSCCTAVLPADVEVCPR CETKGHVRRKNSLQWTMALLVTSVMLYLPANILPIMITDLLGDRMPSTILAGVILLWSEG SYPVAGVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVF VIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFAAMTFDPRLSWDREPDSSHEEE >gi|333596726|gb|GL892086.1| GENE 862 890373 - 892265 2422 630 aa, chain - ## HITS:1 COG:ECs1033 KEGG:ns NR:ns ## COG: ECs1033 COG0488 # Protein_GI_number: 15830287 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 630 6 635 635 1062 88.0 0 MHGAWLSFSDSPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIVYEQD LIVSRLQQDPPRNVTGSVYDFVAEGISEQAEYLKRYHEISHLVMTDPSDKNLNELAKVQE MLDHHGLWQLENRINEVLAQLGLEADMELSALSGGWLRKAALGRALVSGPKVLLLDEPTN HLDIEAIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGDYDTYLLEK EENLRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERSERREVMGSA KMQVEEASRSGKIVFEMENVNYSVDGKVLVNDFSAQVQRGDKIALIGPNGCGKTTLLKLM LGQLQADSGRIHCGTKLEVAYFDQHRAELDPDRTVMDNLAEGKQEVMVNGKPRHVLGYLQ DFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDG YQGTVMLVSHDRQFVDNTVTECWIFEGEGRIGQYVGGYHDARGQQSQSLAQKQAKTKNVA EPVVAKAETVKKSPAKMSYNLQRELEGLPQRLEELEAALEALQIQVADASFFTQPHDYTQ KVLAELSQAEQALEEAFERWEYLESLKNGA >gi|333596726|gb|GL892086.1| GENE 863 892293 - 894401 2576 702 aa, chain - ## HITS:1 COG:STM1061_1 KEGG:ns NR:ns ## COG: STM1061_1 COG0116 # Protein_GI_number: 16764420 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 681 87.0 0 MNSLFASTARGLEELLKTELEALGAKECRVVQGGVHFEGDTRLIYQSLMWSRLASRIMLP MKECKVYSDLDLYTGVQMIDWTEIFTPDATFAVHFNGVNDEIRNSQYGALRVKDAIVDCF TRRNKERPNVDRENPDLRINVWLNGDTASISLDLSGAGLHLRGYRDRTGMAPIKETLAAA IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGQWGFKGWAQHDEAIWKEIK DDAQTRARKGLAEYTSHFYGSDSDARVIERARSNARRAGIGELVTFEVKDVANLTNPLPK GPYGTVISNPPYGERLDSEPALIALHSLLGRNMKAHFGGWNLSLFSASPELLSCLQLRAD RQFKAKNGPLDCVQKNYHLAEIAADSKPTGVAEDYANRLRKNLKKFEKWAKQEGIECYRL YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAQKARQRMLDVIAATIAVLGISPNKLVLK TRERQKGKNQYQKMGEKGDFIEVGEYNARLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK DFLNLFSYTGSASVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRQHRLLQADVLG WLRDTDEQFDLIFIDPPTFSNSKRMEDSFDVQRDHLRLMTDLKRLLRKGGTIMFSNNKRG FRMDHDGLAELGLKAQEISQKTLSQDFARNRQIHNCWLISAV >gi|333596726|gb|GL892086.1| GENE 864 894542 - 895609 909 355 aa, chain + ## HITS:1 COG:Z1297_1 KEGG:ns NR:ns ## COG: Z1297_1 COG3217 # Protein_GI_number: 15800806 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli O157:H7 EDL933 # 1 259 15 273 273 481 84.0 1e-135 MRGIGVTHALADMSGFAFDRIFMVTEPDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGS SVVIRFADFAPVDAPTEVWGNHFTARIAPESINQWLSGFFSRDVQLRWVGPALTRRVKRH DAVPLSFADGFPFLLTSEASLRDLQNRCKASVQMEQFRPNLVVTGADAWDEDTWKVIRIG SVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLKTLQSFRTAQDNGDVDFGQNLIPRSSGV IRVGDEVEILTRGPARVYGAGQEEEMVDVVTNVASAVDIHWEGKVIRGNNQQVLLEQLEQ AGIRVPYSCRAGICGCCRIKLVEGEVSALKKSAIGNDGTILCCSCVPKTSVQLEA >gi|333596726|gb|GL892086.1| GENE 865 895606 - 896148 480 180 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1458 NR:ns ## KEGG: Ent638_1458 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 180 1 180 180 344 91.0 8e-94 MRIKPDDNWRWYFCDEHDRMMLDLANGMLFRSRFARRMLTPDAFAPSGFCVDDAALYFSF EEKCREFDLSKEQRAELVLNALVAIRFLKPQMPKSWHFLAHGMSWTPAIGDAASVNLSDT EEEVNLLVVEPGENAALCLLAQPGVTIAGRVMQLGDAIKVMNDRLKPQLRVDSFSLEQAV >gi|333596726|gb|GL892086.1| GENE 866 896315 - 897325 1002 336 aa, chain - ## HITS:1 COG:ECs1029 KEGG:ns NR:ns ## COG: ECs1029 COG0167 # Protein_GI_number: 15830283 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 635 92.0 0 MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPLAALVRQNVPEKPVQCMGLTFKNPLGL AAGLDKNGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVEAEGLINRMGFNNLGV DHLVENVKKAHFDGVLGINIGKNKDTPVEQGKDDYLICMEKVYAYAGYIAVNISSPNTPG LRSLQYGEALDDLLSAIKNKQTALQAIHHKYVPVAVKIAPDLSVEELIQVADSLVRHNID GVIATNTTLDRSLVQGMKNCDEAGGLSGRPVQLKSTEIIRALSAELKGQLPIIGVGGIDS VIAAREKMAAGASLVQIYSGFIFKGPPLIKEIVTHI >gi|333596726|gb|GL892086.1| GENE 867 897575 - 898150 634 191 aa, chain + ## HITS:1 COG:ZycbP KEGG:ns NR:ns ## COG: ZycbP COG0431 # Protein_GI_number: 15800798 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 190 1 190 191 299 81.0 2e-81 MRVITLAGSPRFPSRSSALLEYAREKLNALDVEVCHWNLHNFAPEDLLYARFDSPALKTL IEQLKGADGLVVATPIYKASFSGALKTLLDLLPERALDGKVVLPLATGGTVAHLLAVDYA LKPVLNALKAQEILHGVFADDLQVIDYQHKPHFTPNLQTRLDSALDTFWHALNRRDRHAA AFYQTQGVAHV >gi|333596726|gb|GL892086.1| GENE 868 898143 - 899105 1110 320 aa, chain + ## HITS:1 COG:ssuA KEGG:ns NR:ns ## COG: ssuA COG0715 # Protein_GI_number: 16128903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Escherichia coli K12 # 3 319 16 332 333 518 83.0 1e-147 MFKTVTRIGLAGLLAVASLAQAAEKAPESLRIGYQKGSVSMVLAKSHALLEKRFPKTTFS WVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPAKPKAEVILVPENS EIKSVADLKGHKVAFQKGSSSHNLLLRALQEAGLTFTDIQPVYLTPADARAAFQQKNVDA WAIWDPYYSAALLQGGVRVLKDGTSLKQTGSFYLAARPYAEKNGAFIQQVLDTFSQADAL TQSQRQQSITLLAKTMGLPEPVIATYLDHRPPTTIAPVDAHVAALQQQTADLFYQNRLVP KQVNIRERIWQPTGIEGKKS >gi|333596726|gb|GL892086.1| GENE 869 899102 - 900247 1323 381 aa, chain + ## HITS:1 COG:ECs1018 KEGG:ns NR:ns ## COG: ECs1018 COG2141 # Protein_GI_number: 15830272 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 695 90.0 0 MSLNLFWFLPTHGDGHYLGTEEGARPVDHGYLQQIAQAADRIGFTGVLIPTGRSCEDAWL VAASMIPVTQRLKFLVALRPSVVSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDG VFLDHTERYEASAEFTRVWRRLLEGETVTFEGKHIHVRDAKLYFPPVQQPRPPLYFGGSS DVAQDLAAEQVDLYLTWGEPPELVKEKIAQVRAKAAAHGRTVRFGIRLHVIVRETNDEAW QAADRLIAHLDDDTIAKAQAAFAQTDSVGQHRMASLHNGKRENLEISPNLWAGVGLVRGG AGTALVGDGPTVAARINEYAELGIDSFILSGYPHLEEAYKVGELLFPHLDVAIPAIPQPR QLQLQGEAVANAFIPRKVAQS >gi|333596726|gb|GL892086.1| GENE 870 900257 - 901048 952 263 aa, chain + ## HITS:1 COG:ssuC KEGG:ns NR:ns ## COG: ssuC COG0600 # Protein_GI_number: 16128901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 261 16 276 278 386 90.0 1e-107 MSATAQKWLLRAAPWFLPVGIVLVWQLASSTGWLSSRILPSPEGVVEAFWSLSASGELWQ HLAISSWRAVIGLSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF GIDESAKIFLVALGTLFPVYINTWHGIRNIDRGLVEMARSYGLSGFALFTHVILPGALPS IMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV SAQWLERSWLRWNPAYTAQEAKA >gi|333596726|gb|GL892086.1| GENE 871 901045 - 901815 747 256 aa, chain + ## HITS:1 COG:ECs1016 KEGG:ns NR:ns ## COG: ECs1016 COG1116 # Protein_GI_number: 15830270 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 250 1 250 255 388 86.0 1e-108 MNTARLNQGTPLLLNGVTKRYGDNTILNALDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL EAPNGGDILAGTTPLATIQDDTRMMFQDARLLPWKTVMDNVGLGLKGSWRKDARQALAAV GLEHRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIETLWQ AHGFTVLLVTHDVSEAVAMADRVLLIEDGKIGLDLTVDIPRPRRVGSARLAELEAEVLDR VMKRGGAEIQRIKANA >gi|333596726|gb|GL892086.1| GENE 872 901867 - 904479 3352 870 aa, chain - ## HITS:1 COG:STM1057 KEGG:ns NR:ns ## COG: STM1057 COG0308 # Protein_GI_number: 16764416 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Salmonella typhimurium LT2 # 1 870 1 870 870 1605 90.0 0 MTQQPQAKYRHDYRAPDYLISDIDLTFDLDATKTVVTAVSQVTRQSATAVPLRLDGEDLT LVSLHINDEAWSDYKEEGNQLVIDNLPERFTLRIVNEISPAANTALEGLYQSGVALCTQC EAEGFRHITWYLDRPDVLARFTTKIIADKTLYPYLLSNGNRIDEGELENGRHWVQWQDPF PKPCYLFALVAGDFDVLRDTFKTRSGREVALELFVDRGNLDRAPWAMTSLINSMKWDETR FGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYF HNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPM AHPIRPDKVIEMNNFYTLTVYEKGAEIIRMIHTLLGEENFQKGMQLYFERHDGSAATCDD FVQAMEDASNVDLSHFRRWYSQAGTPIVTVKDDYNPETEQYTLTISQRTPPTAEQEEKHP LHIPFNVELYDNEGNVIPLQKGGHPVHNVLNVTQAEQTFIFDNVYFQPVPALLCEFSAPV KLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVNRYQQGQPLTLPVHVADAFR AILLDEKIDPALAAEILTLPSATEIAELFDIIDPIAIVAVREALTRTLATELADEFLAIY NANKLDAYRVEHADIGKRSLRNTCLRYLAFGEAELANTLVSKQYHDADNMTDALAALAAS VAAELPCRDALMQEYDDKWHQDGLVMDKWFILQATSPAADVLSKVRSLLKHRSFTMSNPN RVRSLIGAFASSNPAAFHAEDGSGYQFMVEMLTELNSRNPQVASRLIEPLIRLKRYDAQR QAKMRAALEQLKGLENLSGDLYEKIAKALA >gi|333596726|gb|GL892086.1| GENE 873 904734 - 905936 1186 400 aa, chain + ## HITS:1 COG:pncB KEGG:ns NR:ns ## COG: pncB COG1488 # Protein_GI_number: 16128898 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 400 1 400 400 756 90.0 0 MTQFASPVLHTLLDTDAYKLHMQQAVFHHYHDVHVAAEFRCRGDDLLGIYADSIREQVDA MQHLALNDDEYQWLSGLPFFKADYLNWLREFRYKPEQVTVTNDNGKLDIRLTGPWREVIM WEVPLLAVISELAHRYRSPETGVTQAVAALENKLVEFSRLTEGLDMSRFRLMDFGTRRRF SREVQEAIVRRLQQEPWFVGTSNYDLARRLDLTPMGTQAHEWFQAHQQISPDLANSQRAA LAAWLEEYPDQLGIALTDCITMDAFLRDFGPEFAERYQGLRHDSGDPVEWGEKAIAHYEK LGIDPMSKVLVFSDNLDLAKAVDLYRHFSSRVNLSFGIGTRLTCDIPQVKPLNIVIKLVE CNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQVKKAS >gi|333596726|gb|GL892086.1| GENE 874 906104 - 907504 1830 466 aa, chain + ## HITS:1 COG:asnS KEGG:ns NR:ns ## COG: asnS COG0017 # Protein_GI_number: 16128897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 466 1 466 466 900 92.0 0 MSVVPVADVLQGRVAVDQEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPN YNDDVLHLTTGCSVIVTGVVVASPGQGQSYEIQATSVEVTGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVS TLDMENLPRTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT SRHLAEFWMLEPEVAFADLNDVAGLAEAMLKYVFKAVLEERADDMKFFAERVDNDAIARL ERFVSADFAQVDYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYP KDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMQEMGLNPADYSWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF >gi|333596726|gb|GL892086.1| GENE 875 908110 - 909168 1496 352 aa, chain + ## HITS:1 COG:ompF KEGG:ns NR:ns ## COG: ompF COG3203 # Protein_GI_number: 16128896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 352 1 362 362 486 78.0 1e-137 MMKRNILAVVVPALLVAGAANAAEIYNKDGNKLDLYGKAVGLHYFSDSDGNDGDNTYARL GFKGETQINDQLTGYGQWEYNFQGNNSEGADAQNGNKTRLAFAGLKFGDAGSFDYGRNYG LVYDAIGITDMLPEFGGDTGATDNFFSGRTGGLATYRNSNFFGLVDGLNFGVQYLGKNDR DIAVRSNGDGWATSLSYDFEGFGIVGAYGAADRTNNQQTLDWGKGDKAEQWATGLKYDAN NIYLAAVYGEMRNAARLSNRGFANKSQDFSVVAQYQFDFGLRPSIAYYKSKAKDVEGIGD EDYINYIDVGATYYFNKNMSTYVDYQINQLKDDNKLGINNDDIVALGLVYQF >gi|333596726|gb|GL892086.1| GENE 876 909354 - 910544 1694 396 aa, chain + ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 771 93.0 0 MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLGIDGIPEFGRCTQELLFGKGSTIVSEKRARTAQTPGGTGALRVAADFLAKNTAV KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAANHSLDFDGLLASLSEAQAGDVVLFHGC CHNPTGIDPTLEQWEQLAKLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAVHQELIV ASSYSKNFGLYNERVGACTLVAADDQTVDRAFSQMKSVIRANYSNPPAHGASVVATILSN DALRAIWEQELNDMRQRIQRMRLLFVNTLAEKGADRDFSFIIKQNGMFSFSGLTKEQVLR LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL >gi|333596726|gb|GL892086.1| GENE 877 910597 - 911244 659 215 aa, chain - ## HITS:1 COG:ECs1010 KEGG:ns NR:ns ## COG: ECs1010 COG0491 # Protein_GI_number: 15830264 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 414 90.0 1e-116 MNYRIIPVTAFSQNCSLIWCEQTKLAALVDPGGDAETIKQEVAASGVTLMQILLTHGHLD HVGAAAELAEHYGVPIIGPEKEDEFWLQGLPAQSRMFGLEDCQPLTPDRWLNEGDRVNVG NVTLQVLHCPGHTPGHIVFFDDASRLLISGDVIFKGGVGRSDFPRGDHGQLIQSIKQKLL PLGDDVTFIPGHGPMSTLGDERLHNPFLQDEMPVW >gi|333596726|gb|GL892086.1| GENE 878 911265 - 911816 384 183 aa, chain - ## HITS:1 COG:ECs1009 KEGG:ns NR:ns ## COG: ECs1009 COG3108 # Protein_GI_number: 15830263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 183 1 182 182 340 91.0 8e-94 MDKFDANRRKLLALGGVALGAAAILPTPAFATLSTPRPRILTLNNLHTGETLKAEFFDGR GYIQDELARLNHFFRDFRANKIKAIDPGLFDQLYRLQGLLGTKRPVQLISGYRSLDTNNE LRAHSRGVAKKSYHTKGQAMDFHIEGVSLANIRKAALSMRAGGVGYYPRSNFVHIDTGPV RHW >gi|333596726|gb|GL892086.1| GENE 879 911992 - 913815 1554 607 aa, chain - ## HITS:1 COG:STM0995 KEGG:ns NR:ns ## COG: STM0995 COG2989 # Protein_GI_number: 16764355 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 607 1 613 613 954 80.0 0 MLLNKNRGRQLSALSLCLTVMFAPLFTAQADEPEIVPTDSSATMGVQPTSLSQPLDQSPA TAIMAGIKPLPEGIDIESLRQQLMTGLPSGYTPAYINQLTLLYAARDMKPMWENREAVRA FQQQLAEVAIAGFQPQFTTWVELLTDPAVTGQARDVVLSDAMMGYLQFVAGISVNGNRWL YSSKPYKLATPALSVINQWQLSLDNGELPRFIASLAPAHPQYATMHQSLLELVADSRPWP QLRGTTTLRPGQWSSDVPAIREIMKRSGILDNGPKIALPGDETQNAVVSPSAPVKEKTAA VLSNKPAAYDRELVAAVKQFQAAQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLRL LPGTLSTGIMVNIPAYSLVYYQDGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVP PTLARKDILPKVWNDPGYLERHNYTVMRGWNSKEAIDPWMVDWSTITPSNLPFRFQQAPG AHNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQDAGWN DTRISDALKQGDTRYVNIRHNIPVNLYYLTAFVGSDGRTQYRTDIYNYDLTARSGAQILP KAEQLIR >gi|333596726|gb|GL892086.1| GENE 880 913995 - 918443 5724 1482 aa, chain - ## HITS:1 COG:mukB KEGG:ns NR:ns ## COG: mukB COG3096 # Protein_GI_number: 16128891 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 1481 1 1481 1486 2355 92.0 0 MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLKAGVCYSVLDVVNSRHQRVVVGVRLQQVAGRDRKVDIKP FAIQGLPTSVQPTALLTETLNERQARVLTLQELKDKLEAIEGVQFKQFNSITDYHSLMFD LGVVARRLRSASDRSKYYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRIHLDQALEYRRELFTSRK QLVAEQYKHVEMARELGEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDEL QIRLEEQNEVVAEAAELQEENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAL QALQRARELCHLPDLTPESADEWLDTFQAKEQEATEKLLSLDQKMSVAQTAHSQFEQAYQ LVVAINGPLARNEAWDVARELLRDGVNQRHLAEQVQPLRMRLNELEQRLREQQEAERLLA EFCKRQGKNYDFDELEALHQELEARIAALSDTVSNASEQRMTLRQELEQLQSRSKTLLQR APIWLAAQSSLNQLSEQCGQEFASSQDVTEYMQQLLEREREAIVERDEVGARKRDVDEEI ERLSQPGGSEDPRLNALAERFGGVLLSEIYDDVGLDDAPYFSALYGPSRNAIVVPDLSLI SDQLAGLEDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPELPLFGR AARENRIESLHAERETLSERFATLSFDVQKTQRLHQAFSRFIGSHLGVAFEPDPEAEIRK LNTRRGELERALASHENDNQQSRVQFEQAKEGVAALNRILPRLNLLADDTLADRVDEIQE RLDEAQEAARFVQQHGNQLAKLEPMVSVLQSDPEQFEQLKEDYAWSQQVQREARQQAFAL TEVVQRRAHFGYSDSAEMLSGNSDLNEKLRQRLEQAEAERTRTREAMRTHAAQLSQYSQV MASLKSSFDTKKELLNDLHKELQDIGVRADSGAEERARIRRDELHAQLSNNRARRNQLEK ALTFCEAEMDNLTRRLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNNVERRLHRRELAY LSADELRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQ DIIRTDDPVEAIEQMEIELGRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRQLNQ GLQSVSFGQVNSVRLNVNVREAHSTLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEDEARRLRGKDISPCRLLFLDEAARLDARSIATLFELCDRLDMQLIIAAPENISP EKGTTYKLVRKVFQNSEHVHVVGLRGFAPQPPESLPGTADAS >gi|333596726|gb|GL892086.1| GENE 881 918443 - 919147 922 234 aa, chain - ## HITS:1 COG:ECs1006 KEGG:ns NR:ns ## COG: ECs1006 COG3095 # Protein_GI_number: 15830260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 424 94.0 1e-119 MSLTNIEHVMPVKLAQALANPLFPALDSQLRAGRHIGLDELDNHAFLMDFQEYLEEFYAR YNVELIRAPEGFFYLRPRSTTLIPRSVISELDMMVGKILCYLYLSPERLANEGIFTQQEL YDELLSLADESKLLKLVNNRSTGSDLDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRI TESVFRFGADVRAGDDAREAQLRMIRDGEAMPVENHLQLNDEHEENQPDSGEEE >gi|333596726|gb|GL892086.1| GENE 882 919128 - 920450 1488 440 aa, chain - ## HITS:1 COG:ECs1005 KEGG:ns NR:ns ## COG: ECs1005 COG3006 # Protein_GI_number: 15830259 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 440 1 440 440 817 97.0 0 MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVS DAFEQTSETISVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAGELKRAADAADENGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT MAHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQTYFDAPWALTYANADRLLDMRDEEMALRDEEVTGELPPDLEYEEFNEIREQLAA MIEEQLAVYKTRQAPLDLGLVVRDYLAQYPRARHFDVARIVVDQAVRLGIAQADFTGLPP KWQPINDYGAKVQAHVIDKY >gi|333596726|gb|GL892086.1| GENE 883 920454 - 921233 600 259 aa, chain - ## HITS:1 COG:ECs1004 KEGG:ns NR:ns ## COG: ECs1004 COG0500 # Protein_GI_number: 15830258 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 256 1 256 261 427 78.0 1e-119 MRDRNFDDIAEKFSRNIYGTTKGQLRQTILWQDLDKLLAEFGDRPLRVLDAGGGEGQTAI LMAQRGHHVTLCDLSAEMVARAGRAAEEKGVSDNMHFIHCAAQDIPQHLETQVDLILFHA VLEWVAEPQAMLKTLWSMLRPGGALSLMFYNANGLLMRNVLVGNFGYVQQGMYKKKRRTL SPDFPREPQQVYGWLEEIGWEITGKTGVRVFHDYLRDKQKQDDCLDALTEIETRYCRQEP YLSLGRYIHVTARKPQMQG >gi|333596726|gb|GL892086.1| GENE 884 921354 - 922133 807 259 aa, chain + ## HITS:1 COG:ECs1003 KEGG:ns NR:ns ## COG: ECs1003 COG1434 # Protein_GI_number: 15830257 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 385 83.0 1e-107 MLFTLKKYIGGMMLPLPLLLLLIALGLALIWFSRFQKSGKSLVTVGWLALLLLSLQPVAD GLLRPIENTYPTWQGSQKVGYIVVLGGGYTWDPNWAPSSNLINNSLPRLNEGIRLWLANP GSKMIFTGAAAKTNPVSTAEAGARVAESLGVPRSAIITLDSPKDTEEEAAAVKQAIGDVP FLLVTSASHLPRAMIFFEQRGLHPLPAPANQMAIDAPLNPWERIIPSPVWLMHSDRVGYE TLGRLWQWLKGSSGKPGQE >gi|333596726|gb|GL892086.1| GENE 885 922110 - 923003 926 297 aa, chain - ## HITS:1 COG:no KEGG:ECL_02735 NR:ns ## KEGG: ECL_02735 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 297 1 297 297 551 93.0 1e-155 MEQLRAELSHLLGEKLSRVECVNEKADTALWSLYDSQGNPMPLMARSFTSPGVARQLAWK MSMLAREGTVRMPTVYGVMTHEDHPGPDVLLIERLRGVSVEAPTRTPARWEQLKDQIVEA LLAWHRQDSRGLVGAVDSTQENLWPLWYRQRVEVLWGTLNQFNNTGLTMQDKRILFRTRE CLPTLFEGFNDNCVLVHGNFTLRSMLKDSRSDQLLAMVGPGIMLWAPREYELFRLSEGGA AEDLLWHYLQRAPVAEAFLWRRWLYLLWDEVAQLVNTGRFNRASFDLAAKSLLPWLA >gi|333596726|gb|GL892086.1| GENE 886 923148 - 923894 898 248 aa, chain - ## HITS:1 COG:kdsB KEGG:ns NR:ns ## COG: kdsB COG1212 # Protein_GI_number: 16128885 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Escherichia coli K12 # 1 248 1 248 248 452 91.0 1e-127 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAGRVIVATDHPDVARAVEA AGGEVCMTRADHQSGTERLAEVVEKCGFSDETVIVNVQGDEPMIPAAIIRQVADNLAQRQ VGMATLAVPIHHAEEAFNPNAVKVVTDAEGYALYFSRATIPWDRDRFAQSKETIGETFLR HIGIYGYRAGFIRRYVAWSPSPLEHIEMLEQLRVLWYGEKIHVAVAREIPGTGVDTPEDL ERVRVEMR >gi|333596726|gb|GL892086.1| GENE 887 923891 - 924073 232 60 aa, chain - ## HITS:1 COG:STM0987 KEGG:ns NR:ns ## COG: STM0987 COG2835 # Protein_GI_number: 16764347 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 59 1 59 60 103 84.0 1e-22 MDHRLLEIIACPVCNGKLYYSQDKQELICKLDSLAFPLRDGIPVLLENEARSLVAEESKP >gi|333596726|gb|GL892086.1| GENE 888 924119 - 925348 936 409 aa, chain - ## HITS:1 COG:ycaQ KEGG:ns NR:ns ## COG: ycaQ COG3214 # Protein_GI_number: 16128883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 407 1 407 410 629 76.0 1e-180 MSLPQLSLAAARNLHLAAQGLLKKPRRRAQPADILSTVQRMSLLQIDTINIVARSPYLVL FSRLGNYPPQWLDNALSQGELMEYWAHEACFLPRSDFALVRHRMLAPEKMGWKYRQEWMV EHAAEIEQLIAHIQENGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTSGKVMVVERRN FQRVYDLTHRVMPHWDDTRDLLSQDAAEAIMLENSARSLGIFRPQWLADYYRLRQPQLKP LLETWQREQRVMPVSVASLGEMWLHADLFPLLPQAQEGKLQATHSAVLSPFDPVVWDRKR AGQLFHFSYRLECYTPAPRRLYGYFVLPLLHKGQLVGRMDAKMHRKTGMLEIIALWLEEG IKVTAGLEKGLTTALSDFARWQGAHEIVLGRVPAGLFTTCRGGWETDTP >gi|333596726|gb|GL892086.1| GENE 889 925392 - 926369 841 325 aa, chain - ## HITS:1 COG:ECs0998 KEGG:ns NR:ns ## COG: ECs0998 COG1663 # Protein_GI_number: 15830252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli O157:H7 # 1 323 1 324 328 511 80.0 1e-145 MIARIWSGESPLWVLLLPLSWLYGLVSGAIRLLYRLGIKRAWRAPVPVVVVGNLTAGGNG KTPVVIWLVEQLQKRGIRAGVVSRGYGGKAAQYPLVLSPDTTTAEAGDEPVLIYQRTGAP VAVSPVRSDAVKALLAKHDVQIIITDDGLQHYALARDKEIVVIDGVRRFGNGWWLPAGPV RERASRLKTVDAVIVNGGEARAGEIPMHLRPGQAVNLLTGERKDVAQLGQLVAMAGIGHP PRFFATLEQCGGRLEKRIPLADHQALVAEEVDRLAAPGQTLIMTEKDAVKCRAFAKENWW YLPVDAELSGEQPEHLLKELLALVQ >gi|333596726|gb|GL892086.1| GENE 890 926366 - 928114 294 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 344 569 132 355 398 117 36 2e-24 MHNDKDLSTWQTFRRLWPMIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD RSVLLWMPLVVIGLMILRGISSYVSSYCISWVSGKVVMTMRRRLFSHMMGMPVSFFDKQS TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFAMMFYYSWQLSLILIVLAPIVSI AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQ GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS LTNVNAQFQRGMAACQTLFSILDSEQEKDEGTRVIARAKGDLEFRNVTFTYPGREVPALR DISLSIPAGKTVALVGRSGSGKSTIASLITRFYDIDQGEILLDGHDLREYTLQSLRNQVA LVSQNVHLFNDTVANNIAYARTEEYSREEIENAARMAYAMDFINKMDNGLDTVIGENGVL LSGGQRQRIAIARALLRNSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS TIEQADEIVVVEDGVIVERGSHADLLEQRGVYAQLHKMQFGQ >gi|333596726|gb|GL892086.1| GENE 891 928151 - 930415 1095 754 aa, chain - ## HITS:1 COG:ycaI_1 KEGG:ns NR:ns ## COG: ycaI_1 COG0658 # Protein_GI_number: 16128880 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Escherichia coli K12 # 1 428 27 454 454 451 57.0 1e-126 MGIHVISICAILAIIPLYWLPVLPDLQTVWMLIAAGIALSLQQRKWLTFSGLALLFLCWG ILAAQESVWPMNHLTKAPQQAEVVITATDGATMHQGRIVSLNGKRVWAAIGVALYGNYLP QNVCVGQRWATTLRLRAVHGELNDGGYDSQKNAFARHQTLSGRFTHAEIVDAHCSLRAQY LTSLQNTLSAYQWGTVILGLGMGERLSVSREIKNLMRETGTMHLMAISGLHIALAASVIW FLARGIQFFLPGRWIIWQIPLLAGLIFAAFYAWLTGLQPPALRTVIALVVLAALKMSGRQ WSPWQVWLTCVAAILIFDPLAVLSQSLALSAFAVAALIFWYQWLPLAHWQRGWCLRTLIT LLYLQVGMLLLLLPLQILIFHGFSLSSLVANLFAVPLVTFISVPLILLGMFLHLFPVAAL ESIVWLAADKSLAGLFWLLMRLPNGWQDVDERWQYLTLLPWLLIIGWRFRAFSTVPAVCL AGSVVLAFPLWHRVKTDSWSLHMLDVGQGLAMVIERHGKTILYDTGLAWPGGDSAQQLII PWLRWHHLRPEGVILSHEHLDHAGGLASLKAAWPAMWIRSPLAWAGHLPCFRGQRWQWQG LTFSVHWPPANTPVKGNNRSCVVKIDDGEQSVLLTGDIEAQAELGMLSHRWRQLTATLIQ VPHHGSNTSSSTPLLQRVEGQVSLASMARYNAWRFPSVKVVRRYRNEGYLWLDTPQSGQI SVTFSHHSRQIRRLREHYLPRWYHQWFGAPVDNG >gi|333596726|gb|GL892086.1| GENE 892 930628 - 930915 340 95 aa, chain - ## HITS:1 COG:STM0982 KEGG:ns NR:ns ## COG: STM0982 COG0776 # Protein_GI_number: 16764342 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 170 96.0 5e-43 MTKSELIERLASQQPHIPAKAVEDAVKEMLEHMATTLAQGERIEIRGFGSFSLHYRAPRT GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYGN >gi|333596726|gb|GL892086.1| GENE 893 931086 - 932759 2786 557 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157146403|ref|YP_001453721.1| 30S ribosomal protein S1 [Citrobacter koseri ATCC BAA-895] # 1 557 1 557 557 1077 98 0.0 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEEAETVVGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKNNPWQQFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVNGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLSVGDDVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA NFSNNAMAEAFKAAKGE >gi|333596726|gb|GL892086.1| GENE 894 932871 - 933554 651 227 aa, chain - ## HITS:1 COG:ECs0993 KEGG:ns NR:ns ## COG: ECs0993 COG0283 # Protein_GI_number: 15830247 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 391 95.0 1e-109 MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEEAL VPLAAHLDVRFVSTDGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRGF REAPGLIADGRDMGTVVFPDAPVKIFLDASSEERAQRRMLQLQEKGFSVNFDRLLSEIKE RDDRDRNRAVAPLVPAEDALVLDSTSLTIEQVIEKALQYARQKLALA >gi|333596726|gb|GL892086.1| GENE 895 933740 - 935023 1460 427 aa, chain - ## HITS:1 COG:ECs0991 KEGG:ns NR:ns ## COG: ECs0991 COG0128 # Protein_GI_number: 15830245 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 754 89.0 0 MESLTLQPIARVDGTINLPGSKSVSNRALLLAALANGTTVLTNLLDSDDVRHMLNALKAL GVQYALSDDRTRCEVTGNGGALHSAEALELFLGNAGTAMRPLAAALCLGDNNIVLTGEPR MKERPIGHLVDALRQGGAQIDYLEQENYPPLRLRGGFTGGNVEVDGSVSSQFLTALLMTA PLAPQDTVISIKGDLVSKPYIDITLHLMNTFGVVVENQSYQGFVVRGAQQYQSPGNYLVE GDASSASYFLAAGAIKGGTVKVTGIGRNSVQGDIRFADVLEKMGAVVTWGDDFIACTHGE LNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVE EGEDYIRITPPAKLQFAEIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL ARISTLA >gi|333596726|gb|GL892086.1| GENE 896 935092 - 936144 1331 350 aa, chain - ## HITS:1 COG:STM0977 KEGG:ns NR:ns ## COG: STM0977 COG1932 # Protein_GI_number: 16764337 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Salmonella typhimurium LT2 # 1 350 13 362 362 677 90.0 0 MLPADVLKQAQQELCDWNGLGTSVMEVSHRGKAFIQVAEEAEKDFRDLLNIPSNYKVLFC HGGGRGQFAGIPLNLLGDKTTADYVDAGYWAASAVKEAHKYCTPNVIDAKVTVDGLRAVK PMREWQLSDNAAYLHYCPNETIDGIAIHEEPDFGENVIVTADLSSTILSTPLDVSRYGVI YAGAQKNIGPAGLTIVIVREDLLGKAHKSCPSILDYTVLNDNDSMFNTPPTFAWYLSGLV FKWLKQKGGVAQMDKINQQKAELLYGVIDKSDFYRNDVANTNRSRMNVPFQLADSNLDNL FLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMIDFERRHG >gi|333596726|gb|GL892086.1| GENE 897 936343 - 937035 660 230 aa, chain - ## HITS:1 COG:ycaP KEGG:ns NR:ns ## COG: ycaP COG2323 # Protein_GI_number: 16128873 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 230 1 230 230 384 80.0 1e-107 MKAFDLQRMAFDKVPPEFLGEVALRSLYTFVLVFLFLKITGRRGVRQMSLFEVLIILTLG SAAGDVAFYDDVPMVPVFIVFVTLALLYRLVMWLMSKSEKLEDLLEGKPVVIVEEGQLAW ENVKSANMTEFEFFMELRLSSVEQLGQVRLAIMETNGQISVYYYSDDEVKPGLCILPDML IERYKTVPEAGEYACIKCSHVVVMQAGDHQLCPRCTNPEWTKVSRAKRIT >gi|333596726|gb|GL892086.1| GENE 898 937163 - 938923 2557 586 aa, chain + ## HITS:1 COG:ycaO KEGG:ns NR:ns ## COG: ycaO COG1944 # Protein_GI_number: 16128872 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 586 4 589 589 1097 90.0 0 MTQTFIPGKDAALEDSIARFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDKDCALCFTNG KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTEDDELPEG ILDARLRAFYDPENELTASMLIDLQSGNEERGICALPFTRQSDEQTVYIPMNIVGNLYVS NGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPADVLARYPGVVESIAKLEAE GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFAGTTEEEFATLM AIFNAEDQEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGAHLRETLLALPGS EWDKEDYLNLIAQLDEEGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLDQ ALAWTEWTMEFNQSVFSAERTNYYRCLQTLLLLSQEDGREPLQYLNAFVRMYGADAVEAA SAALSGEEPFYGLQAVDSDLKAFPAHQSLLNAYEKLQKAKAAYWSK >gi|333596726|gb|GL892086.1| GENE 899 939330 - 940187 797 285 aa, chain + ## HITS:1 COG:STM0974 KEGG:ns NR:ns ## COG: STM0974 COG2116 # Protein_GI_number: 16764334 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Salmonella typhimurium LT2 # 1 285 1 285 285 494 92.0 1e-140 MKADNPFDLLLPAAMAKVAEEAGVYKATKHPMTTFFLAITAGVFISIAFVFYITATTGTA GMPFGIAKLIGGICFSLGLILCVICGADLFTSTVLIVVAKASGRITWGQLGRNWLNVYVG NLIGCLLFVLLMWLSGEYMTANGGWGLNVLQTADHKMHHTFIEAVALGILANLMVCLAVW MSYSGRSLMDKAMIMVLPVAMFVASGFEHSIANMFMIPMGIVIRNFASPEFWTAVGSTPE SFSHLTIMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGGDHH >gi|333596726|gb|GL892086.1| GENE 900 940239 - 942521 2712 760 aa, chain + ## HITS:1 COG:STM0973 KEGG:ns NR:ns ## COG: STM0973 COG1882 # Protein_GI_number: 16764333 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Salmonella typhimurium LT2 # 1 760 1 760 760 1543 98.0 0 MSELNEKLATAWEGFAKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATDATTKLWDSVME GVKLENRTHAPVDFDTSVASTITSHDAGYINKALEKIVGLQTEAPLKRAIIPFGGIKMVE GSCKAYNRELDPMLKKIFTEYRKTHNQGVFDVYTKDILNCRKSGVLTGLPDAYGRGRIIG DYRRVALYGIDFLMKDKYAQFVSLQSDLENGVNLEATIRLREEIAEQHRALGQIKEMAAK YGCDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRVSTFLDAYIERDLKAGKITEQ DAQEMIDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGVDGRTLVTKNSFRFLNT LYTMGPSPEPNITVLWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC VSPMVVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERM DHFMDWLAKQYVTALNVIHYMHDKYSYEASLMALHDRDVVRTMACGIAGLSVAADSLSAI KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDSRVDDMAVDLVERFMKKIQKLTTYRNAIP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM EHPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM >gi|333596726|gb|GL892086.1| GENE 901 942725 - 943465 942 246 aa, chain + ## HITS:1 COG:ECs0985 KEGG:ns NR:ns ## COG: ECs0985 COG1180 # Protein_GI_number: 15830239 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 510 97.0 1e-144 MSTIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACRKEGIHTCLDTNGFVRRYDPVIDEL LEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYIANKGVKTWIRYVVVPGWSDDDDS AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQY GHKVMY >gi|333596726|gb|GL892086.1| GENE 902 943502 - 944017 464 171 aa, chain - ## HITS:1 COG:no KEGG:ECL_02752 NR:ns ## KEGG: ECL_02752 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 171 1 175 175 208 73.0 5e-53 MSTRRFSTTALAVVLSLTFATAPVMANPGNGNGGGHGNGGGQGNSGNHGNSGNHGNKQNG GQDNPGKSDKSFKSSKDVGNDVDARVSFDHARHLALNYGLTGYDSLPPGIAKNLARGKPL PPGIAKKTVPASMLGQLPSYPGYEWRVVGDDLVLIALSTAIVTSVINGVFK >gi|333596726|gb|GL892086.1| GENE 903 944141 - 945289 1315 382 aa, chain - ## HITS:1 COG:ECs0983 KEGG:ns NR:ns ## COG: ECs0983 COG0477 # Protein_GI_number: 15830237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 381 1 381 382 560 84.0 1e-159 MTTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAHENLPTWQVGMVSSSFFTGNLLGTLL TGGLIKRFGFNRSYYLASLIFAVGCAGLGLMVGFWSWMVWRFIAGVGCAMIWVVVESALM CSGTSRNRGRLLAAYMMVYYVGTVLGQLMVSKLPTDLMSVLPWVTGMVLAAILPLLFTRI VNQNSEHQEATHVWPMLRLRQARLGVNGCIISGIVLGSLYGLMPLWLNHQGVSDSGIGFW MAVMVSAGIVGQWPIGRLADRFGRLLVLRVQVFVVIMGCLAMLSNAAMAPALFILGAAGF TLYPVAMAWACEKVEHHQLVAMNQALLLSYTIGSLLGPTFTAMLMQNYSDNLLFIMIASV SFIYLLMLLRKVGEHPTPVAHA >gi|333596726|gb|GL892086.1| GENE 904 945564 - 946397 1022 277 aa, chain - ## HITS:1 COG:STM0966 KEGG:ns NR:ns ## COG: STM0966 COG3302 # Protein_GI_number: 16764327 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Salmonella typhimurium LT2 # 1 277 11 287 287 372 84.0 1e-103 MIFTVFGQCVVGGFIVLALALLKGNLNAEQQQRLVLSMFGLWVLMGIGFIASTLHLGSPM RAFNSLNRVGASSLSNEIASGAIFFAVGGLGWLLAALKKLPSGLRALWLIVTMVLGVVFV WMMVRVYNTIDTVPTWYSVWTPMSFFLTMFIGGPLLGYLLLRVAGVSGWAMRLLPAISLL ALVVSTVVALMQGAELATIHSSIQQASALVPDYGSLMAWRVVLLTAALVCWIAPQLKGYS PALPLLSLAFVLVLAGELIGRGVFYGLHMTVGMAIAS >gi|333596726|gb|GL892086.1| GENE 905 946590 - 946904 398 104 aa, chain - ## HITS:1 COG:STM0965 KEGG:ns NR:ns ## COG: STM0965 COG0437 # Protein_GI_number: 16764326 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 104 1 104 205 213 98.0 8e-56 MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPDVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSIACNHCEDPACTKVCPSGAMHKRDDGFVVVNEDVCIGCRY >gi|333596726|gb|GL892086.1| GENE 906 946915 - 949359 2704 814 aa, chain - ## HITS:1 COG:STM0964 KEGG:ns NR:ns ## COG: STM0964 COG0243 # Protein_GI_number: 16764325 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 814 1 814 814 1576 92.0 0 MKIKAPEAFMAAEVTRRGLMKTTAIGGLAVASSAFTLPFTRLASAAEALSPASAPEKVVW SACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYEGLHQVRACLRGRSMRRRVYNPDRL KYPMKRVGKRGEGKFERISWDEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSW PPGKTLVARLMNCCGGYLNHYGDYSSAQIAAGLNYTYGGWADGNSPSDIENSKLVVLFGN NPGETRMSGGGVTYYLEQARAKSNARMIIVDPRYTDTGAGREDEWIPIRPGTDAALVNAL AYVMITENLVDQPFLDKYCVGYDEKTLPASAPANGHYKAYILGQGSDGIAKTPEWASTIT GIPVERIVQLAREIGSAKPAYISQGWGPQRHANGEIATRAISMLSILTGNVGIHGGNTGA REGSYEVPFERMPTLDNPVQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWN YAGNCLINQHSEINRTHEILQDDKKCEMIVVIDCHMTSSAKYADILLPDCTASEQMDFAL DASCGNMSYVIFTDQAIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEGWMRHLHELS RKAIPDLPDFDTFRKQGMYKQRDPEGHHVAYKAFREDPQANPLTTPSGKIEIYSEELAKI AATWELPEGDVIDPLPIYTPGFENYNDPLTKKFPLQLTGFHYKARVHSTYGNVDVLKAAC RQEMWINPMDAKARGISNGDRVRIFNGRGEVHIEAKVTPRMMPGVVALGEGAWYNPDANR IDQAGCINVLTTQRPSPLAKGNPSHTNLVQVEKA >gi|333596726|gb|GL892086.1| GENE 907 949572 - 950864 1452 430 aa, chain - ## HITS:1 COG:STM0963 KEGG:ns NR:ns ## COG: STM0963 COG0172 # Protein_GI_number: 16764324 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 430 1 430 430 809 92.0 0 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQ AKARGEDIEPLRLEVNKLGEELDQAKAELDVLQAEIRDIALAIPNIPDDSVPVGKDENDN VEVKRWGTPREFDFEVRDHVTLGEIHAGLDFAAAVKLTGSRFVVMKGQIAHLHRALAQFM LDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEADSSNYALIPTAEV PLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEE SMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGACKTFDLEVWVPAQNTYREISSCS NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQLADGRIEIPEVLR PYMKGQQFIG >gi|333596726|gb|GL892086.1| GENE 908 950957 - 952243 1153 428 aa, chain - ## HITS:1 COG:ECs0977 KEGG:ns NR:ns ## COG: ECs0977 COG2256 # Protein_GI_number: 15830231 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 428 20 447 447 806 96.0 0 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIFFIG ATTENPSFELNSALLSRARVYLLKSLTTEDIEKVLTQAMEDKARGYGGQDIVLPDDTRRA IAELVNGDARRALNTLEMMADMAEVDDAGKRVLKQELLTEIAGERSARFDNKGDRFYDLI SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAISAWD CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMSDARERPDYDVPVHLRNAPTKL MKEMGYGQEYRYAHDEPNAYAAGEEYFPQEMAQTRYYHPTNRGLEGKIGEKLAWLAGQDQ NSPIKRYR >gi|333596726|gb|GL892086.1| GENE 909 952310 - 952924 714 204 aa, chain - ## HITS:1 COG:ECs0976 KEGG:ns NR:ns ## COG: ECs0976 COG2834 # Protein_GI_number: 15830230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Escherichia coli O157:H7 # 1 202 2 203 204 350 93.0 1e-96 MKKIAIACALLSSFVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGNAVQEGQGDL WVKRPNLFNWHMTQPDESVLVSDGKTLWFYNPFVEQATATWLKDATSNTPFMLIARNQSS DWQQYNIKQNGDEFVLTPKGSNGNLKQFTINVSSNGTINQFGAVEQDDQHSSYQLKSQQN GAVDASKFTFTPPQGVTVDDQRNK >gi|333596726|gb|GL892086.1| GENE 910 953052 - 956714 3437 1220 aa, chain - ## HITS:1 COG:YPO1376 KEGG:ns NR:ns ## COG: YPO1376 COG1674 # Protein_GI_number: 16121656 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Yersinia pestis # 1 1220 1 1305 1305 1172 54.0 0 MSQEYTEDKEVTLSKLSSGRRLLEALLIVIALFAVWLMAALLSFNPSDPSWSQTAWHEPI HNLGGVPGAWLADTLFFIFGVMAYTLPVIIIGGCWFAWRHRQNDDYIDYFAVSLRLIGAL ALILTSCGLAAINADDIWYFASGGVIGSLLSSALQPMLHSSGGTLALLCIWAAGLTLFTG WSWVSIAEKIGSFILTLLTFASNRTRRDDTWVDEDEYEDEYEEDDAPDERRESRRARILR GALARRQRVAEKFANPLGRKTDAALFSGKRMDEDEQIEYRGAAVDPDDVLFSGHRATPGE YDEYDPLLNGHSVTEPVAAAAAATTAAQAHVAPVEAVMPSSPVPAPESAIQQPQVDWQTA PGVHTPEPTIAPEPESYISVQQEQWQQPYQPPEPASEPQQPYQAYTPEPAVSEQPYVAPA PEPEAVEEAKPSRPPLYYFEEVEERRAREREQLAAWYQPVPEPVQEPVAKAPSASVAPVD PTPAVASGAETVKQATAAAAASAPLFSPVTDGAPRPQVKEGIGPQLPRPNRVRVPTRREL ASYGIKLPSQRMAEEKARESDYEDDADELHQDELARQFAAQQTQRYGNEYQHDVHSQQDE DDAAEAELARQFAATQQQRYSGEQPSGATPFSLSDFEFSPMKDLVDDGPSEPLFTPSVMP EAEPVHQSPAPQAYAQPQQPALQAYAQPQTPAQPPQPQYQQPAPQPQESLIHPLLMRNGD SRPLQRPSTPLPSLDLLTPPPAEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPV ITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLR EVLDNTKFRDNPSPLTVVLGKDIAGDPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSML YKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLMSA LGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDAQHPVLEKLPYIVVLVDEFADLMMT VGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTI LDQGGAESLLGMGDMLYSGPNSTSPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD SESEGGGGGFDGGEELDPLFDQAVNFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQG IVSEQGHNGNREVLAPPPFD >gi|333596726|gb|GL892086.1| GENE 911 956850 - 957344 566 164 aa, chain - ## HITS:1 COG:STM0959 KEGG:ns NR:ns ## COG: STM0959 COG1522 # Protein_GI_number: 16764320 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 164 1 164 164 313 100.0 1e-85 MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|333596726|gb|GL892086.1| GENE 912 957888 - 958856 722 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 317 5 306 306 282 48 4e-74 MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDL TGPLLMERMHEHATKFETEILFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYL GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLANIASEVHLIHRRDT FRAEKILIKRLMDKVASGNIVLHTNRTLEEVTGDQMGVAGLRIRDTQNTDNVETLDVAGL FVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA GTGCMAALDAERYLDGLAEQGK >gi|333596726|gb|GL892086.1| GENE 913 958971 - 960737 183 588 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 363 565 15 221 245 75 29 1e-11 MEKTRQQELTRWLKQQSVLSRRWLMISRILGFISGLLIVAQAWLLARILNHMIMENIPRE ALLLPFIVLVLVFVLRAWVVWLRERVGFHAGQHIRYEIRRKVLDRLSEAGPAWIQGKPAG SWATLILEQIDDMHDYYARYLPQMALAVFVPLLIVIAIFPVNWVAALILLGTAPLIPLFM AMVGMGAADANRRNFLALGRLSGHFLDRLRGMETLRIFGRGEAETENIRLASQDFRQRTM EVLRMAFLSSGVLEFFTSLSIALVAVYFGFSYLGALDFGHYGTAVTLSAGFLALILAPEF FQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAHPERGEVTLNTNDPVIVEAQDFSVLSP EGKVLAGPLNFTLPAGQRVVLVGTSGSGKSSLLNALSGFMAYTGSLRINKTELRELDPDA WRKQLSWVGQNPQLPAPTLRENVLLARPDAREDELQSVLDRAWVSEFLPLLAQGVDTVIG DQSAGLSVGQAQRVAVARALLNPCSLMLLDEPAASLDAHSEQRVMDALNAASRQQTTLMV THQLEGIADWDQIWVMENGHIVEQGDYAALVAAQGPFATLLANRQEDI >gi|333596726|gb|GL892086.1| GENE 914 960737 - 962458 233 573 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 338 565 11 236 312 94 32 2e-17 MRALLPYLALYKRHKWMLTLGIVLAIVTLLASIGLLTLSGWFLSASAAAGFAGLYSFNYM LPAAGVRGTAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARFRQGELL NRVVADVDTLDHLYLRVISPMVGAFVVIVVVTLGLSFLDVPIALTLGGIMLMTLIILPPL FYRAGKTTGENLTRLRGEYRQQLTAWLQGQAELTIFGASKRYRARMENTELNWHEAQRRQ SELTAFSQALMMLIGGIAVIAMLWMASGGVGGNAQPGPLIALFVFCALAAFEALAPVTGA FQHLGQVIASALRITDIAEQEPEVTFSAGHTAVPEQVALTLSNVTFAYNNQAQNALEEIS LSVDAGQRIAILGRTGCGKSTLLQLLTRAWDPQQGEIRFNDIPLSGFSEAALRKTVSVVP QRVHLFSATLRDNLLLAAPDASDDTLRAMLEQVGLHKLLEDDGLNSWLGEGGRQLSGGEL RRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLATVMKGKTVLMVTHRLRGLVNFD QIIVMDNGHIIEQGSHAELLAKQGRYYQFKQRL >gi|333596726|gb|GL892086.1| GENE 915 962504 - 963208 449 234 aa, chain + ## HITS:1 COG:ECs0970 KEGG:ns NR:ns ## COG: ECs0970 COG2360 # Protein_GI_number: 15830224 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Escherichia coli O157:H7 # 1 232 1 232 234 392 79.0 1e-109 MRLVQLSRHNIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWS PDPRAVLWPGQFHLSRSMKRFHAKSPFRVTLNHAFGQVIEGCAEDRHEGTWITRDIIIAY HQLHELGYAHSIEVWDGSNLVGGMYGVAQGTLFCGESMFSRATNASKTALLVFSQEFARR GGQLMDCQVLNEHTASLGAVEISRRHYIEHLEQCRKETLPRDFWVPRTLFMPNA >gi|333596726|gb|GL892086.1| GENE 916 963493 - 963711 261 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 105 67 1e-20 MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|333596726|gb|GL892086.1| GENE 917 963973 - 964284 151 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLHIRWRQMWLHLNVESLQFISLIDSGVARRGRDSGAVWRNPFYERFFKLLIFIVLIKA AEKGFEVDMLIIFFSNNKMAKICFCSLPYRQLRNDRKRMDSGR >gi|333596726|gb|GL892086.1| GENE 918 964208 - 964645 232 145 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1400 NR:ns ## KEGG: Ent638_1400 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 6 133 7 135 147 173 71.0 3e-42 MENQTISQLYSELSLTPDLPTLVERCNLLTEILLDCHSLPQTQPICRCLGAYLDVVKTEL AESMCDFQVVEFDDEAERLKEKEWLLEDTETKCDYCRALNHVLLVSHFDREMLPHLTGLL HDITHSMAADVAAPECGKPAIHIIN >gi|333596726|gb|GL892086.1| GENE 919 965132 - 967411 1357 759 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 740 14 806 815 527 38 1e-148 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQA AYLLRKHEVSRLDVVNFISHGTRKDEPNQASDPSGQINSNEEQAGGEDRMENFTTNLNQL ARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV IADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG QVDAANLIKPLLSSGKIRVMGSTTYQEFSNIFEKDRALARRFQKIDVTEPSVDETVQIIN GLKTKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPASKRKK TVNVADIESVVARIARIPEKSVSQSDRDTLRTLGNRLKMLVFGQDKAIEALTEAIKMARA GLGHDHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTEVIH QVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANE LLFGSLVDGGQVTVGLDQAKNELTYDFQSAAKHKPEAAH >gi|333596726|gb|GL892086.1| GENE 920 967439 - 967759 311 106 aa, chain - ## HITS:1 COG:ECs0967 KEGG:ns NR:ns ## COG: ECs0967 COG2127 # Protein_GI_number: 15830221 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 201 93.0 4e-52 MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQ LMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA >gi|333596726|gb|GL892086.1| GENE 921 968027 - 968248 186 73 aa, chain + ## HITS:1 COG:STM0943 KEGG:ns NR:ns ## COG: STM0943 COG1278 # Protein_GI_number: 16764305 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Salmonella typhimurium LT2 # 1 73 1 73 73 142 94.0 1e-34 MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNH ASLIVPVEAETVA >gi|333596726|gb|GL892086.1| GENE 922 968319 - 970259 370 646 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 253 646 6 413 413 147 27 2e-33 MTALLELNDIRRNYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKP TSGTYRVAGTDVSTLDGDALARLRREHFGFIFQRYHLLSHLSAAQNVEVPAVYAGVERKK RLERAKGLLTRLGLAERVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSG EEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIRDGELVSNPPPRQSRAAAPKEALP ASTGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLA DIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRYGN IDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKTRVVGE VILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYSTISGRIMGQSWLNSITVRVKEGYDS ALAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMN IMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFL PGWEIGFSPMAILTAFLCSTFTGILFGWLPARNAARLDPVDALARE >gi|333596726|gb|GL892086.1| GENE 923 970256 - 971371 1432 371 aa, chain - ## HITS:1 COG:ECs0964 KEGG:ns NR:ns ## COG: ECs0964 COG0845 # Protein_GI_number: 15830218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 371 10 380 380 546 83.0 1e-155 MNLKGKRRKLFLLLAVVVLAGGFWLWKVLNAPVPQYQTLIVRPGELQQNVLATGKLDALR KVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAQNQIREVEATLMELRAQRAQAQA ERNLAQVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKTN LDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPG QKAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQL TGVKNVLTVPLSALGESAGDNRYKVKVLRNGEIREREVVIGARNDTDVVVVKGLEEGEEV VTSESLPGAAQ >gi|333596726|gb|GL892086.1| GENE 924 971531 - 972487 903 318 aa, chain + ## HITS:1 COG:STM0940 KEGG:ns NR:ns ## COG: STM0940 COG2990 # Protein_GI_number: 16764302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 17 318 22 322 322 288 50.0 1e-77 MSSIVDTPYSTLPQPKSGWQLFKSLASGSLAPGLAWQNPAYRRKFMLRSLATPFTTARLL GHLAKQPRLMQILRVQPGLPCRLHRPWLTVNMGRQNTLDALNDHYQMMSRHLPVSLLNGY LSSQGITLVTLTGKEEQPFSVRLSADAFLDKEGEATLTFCDHQNTVLAELTFTLCQYEGK STLFIGGMQGAKAHVAHEHIQLATKACHGLFPKRLLVEAVMTLAGAFPVEQILAVSNATH IYRSWRYRKKKEGKLLADYDSFWRSLGGEQQDNGNFALPLTMPRKPMEEIASKKRSEYRR RYALLDSLIQQVSQATAR >gi|333596726|gb|GL892086.1| GENE 925 972484 - 974142 1390 552 aa, chain - ## HITS:1 COG:ybjD KEGG:ns NR:ns ## COG: ybjD COG3593 # Protein_GI_number: 16128844 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Escherichia coli K12 # 1 552 1 552 552 941 86.0 0 MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEENLYHFVHDDF WFPPGDVNGREKHLHIILTFRESEPGRHRVRRFRPMSPCWVPCEDGFHRIFYRLEGEMAQ NDGVLTLREFLDEKGNPIPLDNIDELARHLIRLSPVLRLRDARFMRRIRNGTVPNMPEVE VTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTGQARHRLMRRRSHDE QRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLH PIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEYVCRLVRESSRVTAYRLGPGGLNAED GRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK PLIKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPAMDMEHFMYRQ GFDDVFHRVAMIPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVESVPTLLRKMF SRVLWLARGRAD >gi|333596726|gb|GL892086.1| GENE 926 974338 - 975129 920 263 aa, chain + ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 33 263 1 231 231 346 89.0 2e-95 MVSKYGLFESSALYGDITRAQEWVRTFIIEVVMFRKLAAECFGTFWLVFGGCGSAVLAAA FPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDIIGYIIAQ VIGGIIAAAVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLV IHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLF WVMPIIGGILGGVLYRTLLEKRD >gi|333596726|gb|GL892086.1| GENE 927 975306 - 976205 1014 299 aa, chain + ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 299 17 315 315 443 87.0 1e-124 MFSGLLIILLPLIVGYLIPLRHESALKLINRFLSWIVYVILFFMGISLAFLDNLATNLLS ILHYSAVTVVVILLCNIAALFWLERTIPWKNHHHQEKLPSRIAMALESLKLCGVVVLGFL LGLTGWAFLQHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMIVAVIVVASSMV GGVINAFILDLPLKTSLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLI PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA >gi|333596726|gb|GL892086.1| GENE 928 976350 - 978002 2327 550 aa, chain + ## HITS:1 COG:STM0937 KEGG:ns NR:ns ## COG: STM0937 COG1151 # Protein_GI_number: 16764299 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Salmonella typhimurium LT2 # 1 550 1 550 550 1110 94.0 0 MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIVDH YVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADASARVDNPMAELQL VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNAIY AQYHKIMAWLGTWPSDMNALLECSMEIGQMNFRVMSILDAGETSTYGHPTPTQVNVKATE GKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQ QVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMA GFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLIGGCDGARGERNYFTDFAT RVPEDCLILTLACGKYRFNKLDFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAVLNEKFGLRSVTNV EDDMKQLLSA >gi|333596726|gb|GL892086.1| GENE 929 978013 - 978981 936 322 aa, chain + ## HITS:1 COG:ECs0958 KEGG:ns NR:ns ## COG: ECs0958 COG1018 # Protein_GI_number: 15830212 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 607 89.0 1e-174 MTMPTSQCPWRMQVHHIHQETPDVWTLSLLCHDYYPYRAGQYALVSIRNSADTLRAYTIS STPGVSEYITLTVRRIDDGAGSRWLTRDVKRGDYLWLSDAQGEFTCDDKPEDKFLLLAAG CGVTPIMSMRRWLAKNRPQADVQVIFSVRSPEDVIFAEEWRNYPVTLVAENNATHGFVAG RLSRELLQSVPDIANRTVMTCGPAPYMEIVEKEVKALGVTRFFKEQFFTPVAEAATSGMK FTKLQPTQTFFGRVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVTSTMTLTD AEIAEGYVLACSCHPQGDLVLA >gi|333596726|gb|GL892086.1| GENE 930 979949 - 981667 1942 572 aa, chain + ## HITS:1 COG:ECs0957 KEGG:ns NR:ns ## COG: ECs0957 COG0028 # Protein_GI_number: 15830211 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1100 94.0 0 MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAE AQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVALKAAPETATTHWYSAP QPTITPADEELKKLAQLLRYSSNIALMCGSGCAGAHTELVEFAGKLKAPIVHALRGKEHV EYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPGSIGA HSKVDMALIGDIKSTLAALLPLLEEKTDRKFLDKALSDYRDARKGLDDLAKPSDKAIHPQ YLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKA TAPERQVVAMCGDGGFSMLMGDFLSVAQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGT ELHDTNFARIAEACGITGIRVEKASEVDDALQRAFAIDGPVLVDVVVAKEELAIPPQIKL EQAKGFSLYMLRAIISGRGDEVIELAKTNWLR >gi|333596726|gb|GL892086.1| GENE 931 981706 - 982707 1382 333 aa, chain + ## HITS:1 COG:ybjU KEGG:ns NR:ns ## COG: ybjU COG2008 # Protein_GI_number: 16128838 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Escherichia coli K12 # 1 333 1 333 333 600 88.0 1e-172 MIDLRSDTVTRPGRAMLEEMMAAPVGDDVYGDDPTVNELQRYAAELSGKEAALFLPTGTQ ANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGSLPLDKVAAKI KADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVEYGCE LKEITQYCDSFTICLSKGLGTPVGSLLVGNADYIRRANRWRKMTGGGMRQAGILAAAGLY ALKNNVSRLKDDHDNAAWMATQLREIGADVMRHDTNMLFVRVGDEHAAALGEFMKARGVL INASPVVRLVMHLDVNREQLTEVVKHWQAFLQR >gi|333596726|gb|GL892086.1| GENE 932 982718 - 984154 1341 478 aa, chain + ## HITS:1 COG:ECs0955 KEGG:ns NR:ns ## COG: ECs0955 COG0702 # Protein_GI_number: 15830209 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 476 1 476 476 828 83.0 0 MPQRILVLGASGYIGQHLTTALSQQGHQVLAAARNTERLQKRHLPGVTCHNVDLNWPKEL PALLEGVDTLYYLVHSMGEGGDFIAHERQVAMNVRDALLQTPVKQVIFLSSLQAPEHEQS DHLRARQLTADTLRSANIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT PIALENLLHYLVALLDHPAEQHRVLEAAGPEVLSYQAQFEHFMRVSGRRRWLIPVPFPTR WISVWFLNVITSVPPTTAKALIQGLKHDLLADDRALRTLIPQELIRFDDAVRNTLKEEEK LVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTSASLHALWEVVNQIGGKERYFFGNIL WQTRGALDLLVGHRLAKGRPAHPYLQVGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLC FTLKDKGDHRELDVRAWWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIAQLAEQKQEGK >gi|333596726|gb|GL892086.1| GENE 933 984247 - 985260 1151 337 aa, chain + ## HITS:1 COG:STM0932 KEGG:ns NR:ns ## COG: STM0932 COG0451 # Protein_GI_number: 16764294 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 1 337 1 337 337 644 91.0 0 MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQA KVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFD YHHHRDIQEDFRPARFACEFARSKAAGEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFI PRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPDCDKLVSGRAYNITNGEPC TLRSIVQRLIDELKIDCRIRSVPYPMLDMIARSMERFGSKSAKEPALTHYGVSKLNFDFT LDISRAENELGYKPIVSLDEGIVRTAAWLRDHGKLHR >gi|333596726|gb|GL892086.1| GENE 934 985374 - 987206 1954 610 aa, chain - ## HITS:1 COG:STM0233 KEGG:ns NR:ns ## COG: STM0233 COG3979 # Protein_GI_number: 16763623 # Func_class: R General function prediction only # Function: Uncharacterized protein contain chitin-binding domain type 3 # Organism: Salmonella typhimurium LT2 # 1 610 3 587 587 865 73.0 0 MNKRTLLSVLIAGACVAPLMAQAANLKETSSEPYTIKASDLAKKEKELTDFPLMASVKET IQTLDNAQVELIEPGRAANPENVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPA LCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWSEGQKG GYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDK PELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDRDKANGLVPGFGVTTQIING GVECGGPTEIAQSQNRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQD WGWSADTPDGKTYSCQLVGYQTPFSAFKDGDYTKCVQKFYNVNIVNDDGSAVTPDETPVT PTPAPAPSEDETPAPAPAPVPDETPVEPVAVNHAPVAQIAGPIGAVEAGAQVSLSAEGST DPDGNKLTYTWRSQDGQTVTGQDKAVVTFAAPESATAQQYEVSLTVSDGELSSTTSYLLN VKAKASTPSEGDTSYPAWSANSKYNAGDIVNNHGKLFQCKPFPYSGWCNNAPAYYEPGAG LAWAEAWTAL >gi|333596726|gb|GL892086.1| GENE 935 987341 - 987652 314 103 aa, chain - ## HITS:1 COG:STM2877 KEGG:ns NR:ns ## COG: STM2877 COG0741 # Protein_GI_number: 16766183 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 98 46 143 160 119 56.0 1e-27 MNPYAVGQNRDGTRDVGLMQINSSHFTALESRGIDEYRLMTEPCTSIMVGASILSGMIKV YGYNWEAVGAYNAGLKKENYPQRMKYARKVWTKYQQLKLAARY >gi|333596726|gb|GL892086.1| GENE 936 987886 - 990597 2767 903 aa, chain - ## HITS:1 COG:VCA0027_1 KEGG:ns NR:ns ## COG: VCA0027_1 COG3325 # Protein_GI_number: 15600798 # Func_class: G Carbohydrate transport and metabolism # Function: Chitinase # Organism: Vibrio cholerae # 10 564 8 592 594 553 52.0 1e-157 MKFMKPKYLALFIAAATSSAFAAAPGAPTIGYGNDKFALVEVDQAAQDYNNLVKVHNDGV DVKVEWNVWSGDAPTSAKVLLDGQTVWTGAGGATGSATFKVKKGGRYQEQVEVCNASGCA KSASKLIIVADTDGSHLLPLNTTMQENNKAFAKHTDKVVAAYFPEWGVYDRNFPVDKIPA ANLNHILYGFIPICGGDGINDGLKTIEGGNSFRVLQNDCKGRPDYTVAIHDPWAALQKPQ AGVSNWDDPYKGNFGQLMALKKAHPDLKVLPSIGGWTLSDPFFHMGDPAIRARFVSSVKE FLQTWKFFDGVDIDWEFPGGGGVSENLGNPQQDKATYTALMHDLRTMLNELSAQTGRTYE LTSAIGAGRDKIEDVDYTAAQQYLDHIFLMSYDFYGGWSNTVLGHQAALRAPAWRPDTDY TTENGVNALLSQGVQPGKIVVGAGMYGRGWTGVHGYTGNNPFTGTATGMVKGTWEPGVVD YRQIVNEYKGKPGWEYGYDADAEAPYVFNKTTGDLITYEDARSTTAKGKYVLANKLGGLF AWSIDSDTGDILNAMNESLLGGSTPVDPVVTNHAPIASSADQNVSGPATVTLDGSASSDP DGDAITYKWTQVSGPSVTINNSTKAKATFNVAAATTDQTMTFRLTVTDAKGLSNAIDVQV VNKAPKANQAPVVNAMEAVTLQAGETYSLHAQAADPDGDALTYAWSVPADMHATGTDTAN VSITAPDVTSTSTYTLSVVVGDGKTSVQSNVQVTVNPKPADVTPPADDVTPPADDVTPPA DDVTPPSDEGSATNSCDAPVDANASKYAAWDASKIYNNGDTVSFDHLVWKAKYWTQGNQP GFGVDAWELVSNVKMNWRSDMVYNGGDTTTYEGNVYRAKWWTSGDNPANSDVWVKEGPST DCK >gi|333596726|gb|GL892086.1| GENE 937 990857 - 991654 622 265 aa, chain - ## HITS:1 COG:VC2426 KEGG:ns NR:ns ## COG: VC2426 COG1989 # Protein_GI_number: 15642423 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Vibrio cholerae # 12 252 8 268 291 166 41.0 4e-41 MNTVVLMWDTCPLGFPIMSAILGGIAGSFLGVVAERVPGMVMEVEGSGNLLFPASHCPVC KHTLAAWENIPLVSWLLLRGRCHQCGTAIPLRIFLVELFSALFCGVTAWVMPDLQSLFSL WLLAAFLLPLAMIDWQHQLLPDCLTQPLLWAGLVLHAFDHTLPLRDALFGAVSGYLSLWL LYWAFRLMAGREGLGYGDFKLLAALGAWCGWQALPSIELAAALSGIVGYFAANNLNKNNL TISFGPYLAFAGIVVFISQQLTFTF >gi|333596726|gb|GL892086.1| GENE 938 991651 - 992136 332 161 aa, chain - ## HITS:1 COG:no KEGG:CKO_02219 NR:ns ## KEGG: CKO_02219 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: Bacterial secretion system [PATH:cko03070] # 1 161 1 161 161 211 67.0 8e-54 MKERIAQLKSRYQNYSAREKVILKLCAVAIFGAAVYYAGVIPLDNMIQNSKSTLKRQKET LNWMRSEIDKNHLQVQLVKTDNPRTVVENSAHEINLSLTDVRQEGQTLSFVVNRVNVYEL KSWLREINQTSGVRLQKMNLTPVDHLSDVKAQVELTWSKSA >gi|333596726|gb|GL892086.1| GENE 939 992133 - 993266 1086 377 aa, chain - ## HITS:1 COG:gspL KEGG:ns NR:ns ## COG: gspL COG3297 # Protein_GI_number: 16131212 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulL # Organism: Escherichia coli K12 # 33 366 41 373 388 138 29.0 2e-32 MKQVLFVRPDSREGGKIMWCESGSERVEVLDTLEALADHPLAARVCLLLPASDMIFRHFT LPKKVASQAMAFSWMAEETLIGDVDNLHWTVLHKKGAEVDAVAMDADRLRAALARCQDAG LKVIQALPDAWLLPVTAGGSTLVAQEGSYWLRFSPHVAGEMEASLLPLLMQKTGEGEVCC YGDAPAGVNVDVQYAWQHPLVLIQPQWQSCRVNMLHSEFSPKASNGRAAKSMKVAMATAG LLSVGLLLGPRIAMAWMLVQQENQLQEEIVQVYQHHFPSMRQQTNIKYHFGQNLKKQSKG IFLQLEELESARQAVPAMEIDLLEYDAQQNRLTLSVSAQNQPALQAFVNQTSENFDFSLQ PVSTTEPYTAMIAGKHK >gi|333596726|gb|GL892086.1| GENE 940 993282 - 994292 1078 336 aa, chain - ## HITS:1 COG:gspK KEGG:ns NR:ns ## COG: gspK COG3156 # Protein_GI_number: 16131211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Escherichia coli K12 # 29 307 27 299 327 111 28.0 2e-24 MSRIHKQKGVALLVVLILLVMMSALAAKISQQFCRNLQKTHYQVSQQQLRWAMLAQEKVV KDRLQTDASGESKPLSLDGDWHQPLETRGEDYTVVSQVEDAQDCFNVNNLLTADAAPQGQ SAPAVPEKPRKAQIIEQLLTESGLSQSTAEEVYFQLVDYLDGDSTTAKEGAESDAWAGVV PARQPANQMMRNIAEIKRLPAFPVAAYPKVSKLLCALPDAASKVDVNTLQPEQAAVLAAM FPGKLTRDDAVRLLDSRPESGWENLEAFSKALEQTFPQLKDDLPQVADQFSLNSRYFRVN YSGNTDELTLRVVSQLQVNNEAGEIVTWQRRYRMIE >gi|333596726|gb|GL892086.1| GENE 941 994289 - 994909 557 206 aa, chain - ## HITS:1 COG:VC2727 KEGG:ns NR:ns ## COG: VC2727 COG4795 # Protein_GI_number: 15642721 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Vibrio cholerae # 1 168 22 207 221 66 27.0 4e-11 MIALTIFAVISTLAWQILDGAMRTSSATDASAAKLNQLQRAWSLMERDFFQLQARAPRNE PEIFRQEGDALELTTLNGVSGTVQLERVRWRLEEGRLYRDVWPVIDGPADAKPDEVPIIS EVKSLQWRFYRQGWLKSWSDAAHLPDGVEVTLTMENGDTWRWVFTTPGDMPEMAAAAAPE KAADAPATTPEAAPAPEAAPAPEAKP >gi|333596726|gb|GL892086.1| GENE 942 994951 - 995331 515 126 aa, chain - ## HITS:1 COG:VC2728 KEGG:ns NR:ns ## COG: VC2728 COG2165 # Protein_GI_number: 15642722 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Vibrio cholerae # 6 96 2 90 117 72 42.0 1e-13 MANGNKKQKGMTLLEVMVALVIFSTAALALMNSVSLNVRFTHGLADTLQASWVAENQLAE AQLTKTDFPDAEQQGTEIMGGRSWNWRKQRVKTADNGWANAIRVYAEGDDSQPVISLHII PPGESK >gi|333596726|gb|GL892086.1| GENE 943 995324 - 995809 463 161 aa, chain - ## HITS:1 COG:hofH KEGG:ns NR:ns ## COG: hofH COG2165 # Protein_GI_number: 16131208 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 136 1 139 169 62 29.0 2e-10 MKNQRGFTLLEIILALVIFASCAMMVVSTIPSRSGADIFGQQLKALVDYGSDRAVMDGNI VGLVITTDKYQLVTLADKNGERHWVPLSAGRITTKGDFPEEMHVSLSPQRLAATVASEPQ VIFLPDGEISRFTLTLQSYDKQHHFRVVSQGAAPVSVENDG >gi|333596726|gb|GL892086.1| GENE 944 995809 - 996258 588 149 aa, chain - ## HITS:1 COG:hofG KEGG:ns NR:ns ## COG: hofG COG2165 # Protein_GI_number: 16131207 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 10 149 6 145 145 189 72.0 2e-48 MALKRKNLARQAGFTLLELMVVIVILGVLASMVVPNLMGNKEKADEQKATSDIVALEGSL DMYKLDNHRYPTTEQGLQALVTKPEIAPIPNGYRADGYIRRLPQDPWGGDYILVSPGEHG AVDVFSAGPDGEANTADDITNWSLDKKEK >gi|333596726|gb|GL892086.1| GENE 945 996262 - 997470 1513 402 aa, chain - ## HITS:1 COG:hofF KEGG:ns NR:ns ## COG: hofF COG1459 # Protein_GI_number: 16131206 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli K12 # 4 401 3 397 398 384 51.0 1e-106 MAFYAWTATDTAGKTQRGTLQAEGQKQVRQMLREQKLMPVSITETREAATAGKAKTGAKL STPVLSMFTRQLSTLVNAALPLESALKAISKQTEDKKLAAMVVEIREKVVEGHTLFDAFS QFPRTFDKLYCTLVMAGEKTGHLGDVLEKLAEYNEQRQKMKSKLTQAMVYPITLTVVAIA VISILLVAVVPQVIEQFTHMKQQLPITTRTLIAVSDFLQAWGIYIVGILGGGFIGFKTWL RNAKNRFRWHSWLVNGSPIKKLVCAINSARYIRTLSILQASSVPLLEGMYIAMDGIENLY ARQVLEQAADTVRQGASLYAALEQAKLFPPTMLYMIASGEESGELGNLMDRAAENQESAL QHRITLTLSVFEPALVVSMATIVLFIVLSILQPLLQLNNMVG >gi|333596726|gb|GL892086.1| GENE 946 997470 - 998948 1790 492 aa, chain - ## HITS:1 COG:gspE KEGG:ns NR:ns ## COG: gspE COG2804 # Protein_GI_number: 16131205 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 10 486 10 486 493 577 62.0 1e-164 MDELSKTLCSSSYAKDNGVLFYNNDVYIRDDTPAFALLEVRRVLGRAFVPVTLTPEAFDE MLAKIWQQSSGVSQQLVDDMDADIDLMALTEEIPDNEDLLDNDENSPVIRLINAILGEAV KDGASDIHIETFERTLSIRFRVDGVLRPVLQPARKLAPLLVSRIKVMSKLDIAEKRLPQD GRISLRIGRKAIDVRVSTIPSQYGERVVMRLLDKSNLKPDINKLGLIDEELEKLKGLIDR PHGIILVTGPTGSGKSTTLYAILSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTF ARGLRAILRQDPDVVMIGEIRDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGL ESFLIGSSLLGVIAQRLVRRLCTHCRTTSPLDANEKALFSFMDAPPKAIYRAVGCEHCRQ SGYQGRAGIHEFLVVDSTMRRAIHEDKDEMSIETQLFKQAYSLRENGLLKVISGVTSLEE VMRVTAERGGDA >gi|333596726|gb|GL892086.1| GENE 947 998963 - 1000885 2298 640 aa, chain - ## HITS:1 COG:gspD KEGG:ns NR:ns ## COG: gspD COG1450 # Protein_GI_number: 16131204 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Escherichia coli K12 # 8 628 13 651 654 670 57.0 0 MKKFPWACVALTALSLYSGSLLAANFSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTV SVRTYNVLTEDEYYQFFLSVLDLYGLSVIPMDNGMVKVVRSSVARTAGAPLADSKNPGKG DEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPSNVLLLTGKASVVNRLVDLVQ RVDNNGIQRREIVPLRFASAKELAEMLNNLSNEEQKGQNAPQLATKVVADDETNSLVISG PEDARARTRSLIHQLDREQNNEGNTRVFYLKYASATKVVPVLTGIGEQLKDKPGTAKAKT ASASTDLNITADESTNALVITAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGNGMD LGVQWTSKHGGVQFGATDLPISQIKNGTMKGTSFTGLATGFFNGDFGMLMTALSTNGKND ILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTSGDNVFNSVERKTVGTKLKIVPQINDGD MIHLKIEQEVSSVDNNATEDASLGPTFNTRTINNEVMVHSGQTVVLGGLMENVTKQSVSK VPLLGDIPLVGQLFRYTSQDTSKRNLMVFIHTTVLRDDDNYSAASKEKYDQIRVRQMQRA EEKKLGIVEPEEGPVLPAFPSASTSAAPVKTSATRNPFKE >gi|333596726|gb|GL892086.1| GENE 948 1000899 - 1001630 506 243 aa, chain - ## HITS:1 COG:gspC KEGG:ns NR:ns ## COG: gspC COG3031 # Protein_GI_number: 16131203 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulC # Organism: Escherichia coli K12 # 48 240 72 256 271 65 27.0 8e-11 MFVLLIFCGQQGYLTFKDYKKVTNKLADSDEQPLKASRNEKPFTLFTAAVRQENLPAAVK APLAAEIEGIVRSDDPWLSFAVIKTPGGQKSYREGEPLTGFNDAFIQEINKDNVVVNYEG ATQVLALKQPDYFKGGVDSGPVTKSTKDAGADSVHLDDYLVLKPIIEKGHLEGYRINPRN ASAFYSQSGLEKGDVAVEVNSVDMTDEAKAKSIIANWSKMKEAEVVVRRHAHLENIRVNV LNN >gi|333596726|gb|GL892086.1| GENE 949 1001931 - 1003493 1541 520 aa, chain + ## HITS:1 COG:no KEGG:CKO_02233 NR:ns ## KEGG: CKO_02233 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 516 1 521 525 648 62.0 0 MYQSHFNFKNPPFRTITRLSGDFLVPYHQDVFNLLKEKTQLAGIIGLFCDDAPLLSQFID ALKASNNTVLAINAFPKLSASSLLYKLNPGTKAIKDRMQAVDAVVRQWQEGKAKSRVLTI AHAEAMKESCREVLGTLLTRAQELNFRLSVVLTGTADQAILLGQPELREYTHTHHVLRPL TCREYLSYVQAQCEEHGCENSPLTPARVRKMHTLTKGNISKLNALAHLSMLAAWTERAAQ VSPRHLRLAAGEILPAKKHGKRLATVGLFASVLFATCGWYLTSSISARLPIQLPVPVSWK QQVPKADAPVVPVIDNEMVNQPDAMHQLYLMWGYDASAEDALCENAAKVNLMCKQGNTSP DTLAKEGYPWVSELKTGGHLNYAVVARVGDTSIDLLMNNRTWQVSRSWFNRHATGNFTQL HRLTPEGKDAIGAASDSKDMAWLDRQLSLALSQPETHARIWTAEMMKRTREFQQKINLPV DGIPGEDTLMQLMRVTNSTPSVLIQANQTKTDAKTQEKKA >gi|333596726|gb|GL892086.1| GENE 950 1003493 - 1004140 516 215 aa, chain + ## HITS:1 COG:no KEGG:ECL_02802 NR:ns ## KEGG: ECL_02802 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 196 1 202 208 241 66.0 1e-62 MSTICLAAQRSYTTGEAVWFSYRLPSLKTVFGNSLLWMVGLCAMLVAGLYAHIYWNLRHP APEPVKASVAKPETQLSDMHYVYVSKPFPHPHPAPAPMHVDVPPMQDLPINSDDADWQQA PDGAVPHDTSRDTLPGTEAHEQDMPSASADHNDRDNASLTELFKQALKEQERDYSQGKIP APPVDETQDNSQASLKNYGHSRSPLSIKEERLEQD >gi|333596726|gb|GL892086.1| GENE 951 1004137 - 1004760 449 207 aa, chain - ## HITS:1 COG:no KEGG:ECL_02803 NR:ns ## KEGG: ECL_02803 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 207 1 207 207 332 78.0 6e-90 MLSIYAKKLRPHHEMEKIISATSVFEEKTLKKWQKISTADTGYIHIIVSGEVEFRRESDE LCMFTVTGHCIFGLSSMYYNATHMYGLVRANTIVRSVRKEDFAQLMTEKNLWPELTKVLS WYICMLSKRDDVLVARSAYSVVREFLYEINDLIVHQQRDINVYDYIQEYTNLARSTIIKI LSDLKKGQYIVVEKGRLLNLTTLPEKY >gi|333596726|gb|GL892086.1| GENE 952 1005026 - 1005856 623 276 aa, chain - ## HITS:1 COG:ECs0953 KEGG:ns NR:ns ## COG: ECs0953 COG3023 # Protein_GI_number: 15830207 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 275 1 275 276 422 76.0 1e-118 MKRSLSTLLLALLLAGCAQEKGIVDKGAYELDTRHQAQAAYPRIKVLVIHYTADDFDTSL ATLTDKNVSSHYLIPANPPAPDGKPRIWQLVPESELAWHAGISFWRGTNRINDTSVGIEL ENRGWRKTHGVKTFVPFEPKQIAALIPLARDIIARYDIKPQNVVAHSDIAPQRKDDPGPL FPWHELAQQGIGAWPDPARVNFYINGRPRYQQVDTAVLLDLLSRYGYEVPEDATPAQQQR IIMVFQMHFRPQLWNGIADVETMAIAEALLEKYGQG >gi|333596726|gb|GL892086.1| GENE 953 1005853 - 1006176 511 107 aa, chain - ## HITS:1 COG:STM0930 KEGG:ns NR:ns ## COG: STM0930 COG0393 # Protein_GI_number: 16764292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 183 96.0 5e-47 MQFSTTPTLEGQPITEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREI AFKELGEQAKALGADAVVGIDIDYETVGKDASMLMVSVSGTAVKTRR >gi|333596726|gb|GL892086.1| GENE 954 1006274 - 1006792 678 172 aa, chain + ## HITS:1 COG:no KEGG:ECL_02806 NR:ns ## KEGG: ECL_02806 # Name: not_defined # Def: putative lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 172 1 172 172 320 94.0 1e-86 MRYSALTLLVPCALVLSACTTPVTPAFKDIGTRSGPCIEGGPDAVAQQFYDYRIQHRGND ITALRPYLSDNLAKLLSDATRDPQHNALLSSDPFSSRATLPDSAEVASASTIPNTDARNI PLRVKLTQGTQTWQDEVLMIREGQCWAVDDVRYLGGSVHAPAGTLRQSIENR >gi|333596726|gb|GL892086.1| GENE 955 1007019 - 1007747 484 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 241 2 240 245 191 42 1e-46 MSIKLNGINCFYGAHQALFDITLSCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLA IAGNHFDFAKTPSDKAIRELRQNVGMVFQQYNLWPHLTVVQNLIEAPCRVLGLSKDQAMA RAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPAVLLFDEPTAALDPEITAQI VSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGYIVEQGDASCFTNPQTDAFKNYL SH >gi|333596726|gb|GL892086.1| GENE 956 1007766 - 1008497 1202 243 aa, chain + ## HITS:1 COG:STM0890 KEGG:ns NR:ns ## COG: STM0890 COG0834 # Protein_GI_number: 16764251 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 243 1 243 243 448 93.0 1e-126 MKKVLIAALLASVSLSATAAQTIRFATEASYPPFESIDANNKIVGFDVDLANALCKEIDA TCTFSNQAFDSLIPSLKFRRIDAVMAGMDITPEREKQVLFTTPYYDNSALFIGQKGKYAS VDLLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTE WLKANDKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKFNAALEKVKKDGTYETIYKKW FQK >gi|333596726|gb|GL892086.1| GENE 957 1008504 - 1009220 939 238 aa, chain + ## HITS:1 COG:STM0889 KEGG:ns NR:ns ## COG: STM0889 COG4215 # Protein_GI_number: 16764250 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 237 1 237 238 410 93.0 1e-114 MNEIFPLASAAGMTVGLAVCALIIGLVLAMFFAVWESVKWRPVAWLGSALVTVLRGLPEI LVVLFIYFGSSQLLLTLSDGFTLNLGFAQIPVQMQIENFDVSPFLCGVIALSLLYSAYAS QTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLRATRFERRPG >gi|333596726|gb|GL892086.1| GENE 958 1009220 - 1009888 1046 222 aa, chain + ## HITS:1 COG:ECs0944 KEGG:ns NR:ns ## COG: ECs0944 COG4160 # Protein_GI_number: 15830198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 363 93.0 1e-100 MLDYLPELMKGLHTSLTLTVASIIVALILALIFTIVLTLKTPVLVWIVRGYITLFTGTPL LVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG QWQSCGALGMSKKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQLL YGRTYDVMVFGAAGLVYLVVNGLLTLMMRLIERKALAFERRN >gi|333596726|gb|GL892086.1| GENE 959 1010001 - 1010795 1145 264 aa, chain + ## HITS:1 COG:ZartJ KEGG:ns NR:ns ## COG: ZartJ COG0834 # Protein_GI_number: 15800615 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 EDL933 # 16 264 12 260 260 436 87.0 1e-122 MALYIHAADTAHNDKTDGSITMKKLVLAALLATFAAGASAADKISFGVSATYPPFESLDA SNQIVGFDIDLAKALCKQMQADCTFTNHAFDSLIPSLKFKKYDAVISGMDITPERSKQVA FTDPYYANSAVVIAKKGAYTSFDQLKGKRIGMENGTTHQKYLQDKHPEVKTVAYDSYQNA IIDLKNGRIDGVFGDTAVVNEWLKTNPQLGTATEKVTDPQYFGTGLGIAVRPDNKALLEK LNGALKAIKADGTYQKISEQWFPQ >gi|333596726|gb|GL892086.1| GENE 960 1010871 - 1012340 1534 489 aa, chain - ## HITS:1 COG:lin2727 KEGG:ns NR:ns ## COG: lin2727 COG0642 # Protein_GI_number: 16801788 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 116 488 114 457 459 127 26.0 4e-29 MMRRFSLSQRLTLLFTVLLLLCASVACAVQLYSSMQYGNAMVQRLSGGLAQQIVQREAIL DAQGRVDRSALKPLFDRLMTFNPSVELYVVSPDGEILADAAPPGHIQRQKIDLAPIQSFL SGTVMPVFGDDPRSQNKKVFSATPLRQDGELKGYLYIILQGEESNALAEMAWHKALWSTA LWSMLLVALFGLLAGLLLWYWVTRPVKQLTLNVAGLEQDSISAIKQLAAQPLEPAGHDEV AILRNTFIELARKITSQWDRLADSDRQRREFIANISHDLRTPLTSLLGYLETLSLKSATL SPQEHQQYLATALRQGQKVRHLSQQLFELARLEHGGIKPQRERFAMAELISDVAQKFELT ARTRELNLHIDVPGPLPQVFADVSMIERVVTNLLDNAIRHTPAGGDIRLAVWQENDRLQV EVADSGTGVDGALRDELFQRPSALNPQAAREHRGGLGLLIVKRMLELHGGGIRLMESVSG ARFRFFVPL >gi|333596726|gb|GL892086.1| GENE 961 1012324 - 1013031 895 235 aa, chain - ## HITS:1 COG:TM1655 KEGG:ns NR:ns ## COG: TM1655 COG0745 # Protein_GI_number: 15644403 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Thermotoga maritima # 2 228 12 242 247 206 47.0 3e-53 MKQILLVEDDHDIAALLRLNLEDEGYTITHEPDGGKALPLLEKQPWDAVILDLMLPNVDG LEICRRIRQMTRYLPIIIISARSSETDRITGLETGADDYLAKPFSVQELIARIKALFRRQ QAMGQAQTDGIIQAHGLTIDPLARTVRLNGQHVDLTPREFELLYFFARHPGEVFSRLALL EQVWGYQHEGYEHTVNTHINRLRIKIEKDAAEPEIVRTVWGKGYKFAELNHDAAL >gi|333596726|gb|GL892086.1| GENE 962 1013144 - 1014280 1230 378 aa, chain - ## HITS:1 COG:ybjF KEGG:ns NR:ns ## COG: ybjF COG2265 # Protein_GI_number: 16128827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 374 1 374 375 664 86.0 0 MQCALYDAGRCRSCQWIEQPVPQQLTAKMVDLQQLLAAHAVGEWCAPVSGPEQGFRNKAK MVVSGSVEKPLLGMLHRDGTPEDLTGCPLYPASFEPVFAALKPFIARAGLTPYNVARRRG ELKYLLLTESQIDGGMMLRFVLRSETKLEQLRAALPELQEQLPQLKVITANIQPVHMAIM EGEKEIFFTDQHALAENFNGVPLWIRPQSFFQTNPTVASALYATARDWVRALRVHHMWDL FCGVGGFGLHCATPDMQLTGIEISAEAIACAKQSAAELGLTNLHFQALDSTQFATGQGNV PELVLVNPPRRGIGQALCDYLSQMAPEYIVYSSCNAQTMAKDIASLPGYRIERVQLFDMF PHTAHYEVLTLLTKAQAG >gi|333596726|gb|GL892086.1| GENE 963 1014321 - 1014794 477 157 aa, chain - ## HITS:1 COG:no KEGG:ROD_08641 NR:ns ## KEGG: ROD_08641 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 157 1 157 157 256 85.0 1e-67 MGFLQKTRHSHARPNVPALVQVAALAIIMIRCLDVLMIMNTLGPRGMGEFIHRSAQTWNL TLVFLSSLMLVFIEIYCAFSLVKGRNWARWVYLLTQITAASYLWAASLGYGYPELFSIPG ESRREIFHSLVMQKLPDMLVLFLLFAPASSRRFFRLQ >gi|333596726|gb|GL892086.1| GENE 964 1014861 - 1015706 1059 281 aa, chain - ## HITS:1 COG:STM0880 KEGG:ns NR:ns ## COG: STM0880 COG1177 # Protein_GI_number: 16764242 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 449 94.0 1e-126 MNNLPVVRSPWRIAILVIGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELFHDDA MMSAVGLSLTIAALAATMACVLGTIAALVMVRFGRFRGANGFAFMITAPLVMPDVITGLS LLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGAT PLKVFFIITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP EINALASIILGVVGIVGFIAWYLMARAEKQRVRDIQRARRG >gi|333596726|gb|GL892086.1| GENE 965 1015703 - 1016656 1330 317 aa, chain - ## HITS:1 COG:STM0879 KEGG:ns NR:ns ## COG: STM0879 COG1176 # Protein_GI_number: 16764241 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 525 94.0 1e-149 MSTLEPPARVKKPGGFAPWLARMQMVHGRKLVIAMPYIWLILLFLLPFLIVFKISLAEMA RAIPPYTDLWEWADGQLTLTLNLGNFLQLTDDPLYFEAYLQSLQVAAISTICCLLMGYPL AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGILNNFLLWLGVIDQPLTI LHTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSVIVPLTKGG IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIVMLLLLIV PIMWFHKHQQKQMGDHG >gi|333596726|gb|GL892086.1| GENE 966 1016666 - 1017799 1327 377 aa, chain - ## HITS:1 COG:potG KEGG:ns NR:ns ## COG: potG COG3842 # Protein_GI_number: 16128823 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 377 28 404 404 715 92.0 0 MNDAIPRPQAKVRKALTPLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKST LLRMLAGFEQPTAGQIVLDGVDLSSVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDK LPKAEITARVAEMLSLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL DKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH PTTRYSAEFIGSVNVFEGLLKERQEDGLVIESPGLVHPLKVDSDNSVVDNVPVYVALRPE KIMLCDEPPADGYNFAVGEVVHIAYLGDLSIYHVRLKSGQMLSAQLQNEHRYRKGQPTWG DEVSLCWDADSCVVLTV >gi|333596726|gb|GL892086.1| GENE 967 1017903 - 1019015 1693 370 aa, chain - ## HITS:1 COG:potF KEGG:ns NR:ns ## COG: potF COG0687 # Protein_GI_number: 16128822 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 370 1 370 370 680 90.0 0 MIALNKKWLSGLVAGALMAVSAGTLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYD VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLSNWKNLDPEVLKLV AKHDPENKYAMPYLWATTGIGYNVDKVKAALGPDVKLDSWDVVLKPENLEKLKSCGVSFL DAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV AIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLM RPEVIAHISDHVYYANGNKASVPLVSEEIRNNPAIYPPADVFAKLFTLKVQEPKIDRVRT RAWTKVKSGK >gi|333596726|gb|GL892086.1| GENE 968 1019365 - 1019841 445 158 aa, chain - ## HITS:1 COG:no KEGG:ECL_02820 NR:ns ## KEGG: ECL_02820 # Name: not_defined # Def: putative sensory transduction regulator # Organism: E.cloacae # Pathway: not_defined # 1 158 1 158 158 288 100.0 4e-77 MDLQVVPTLDTLRQWLDDAGITFFECDSCQALHLPHMQNFDGIFDAKIDLINDVILFSAL AEVKPSALLALASDLSAINASSLTVKAFLDIQDDNLPKLVVCQSLFSGAGLSFKQFAWFM RLSEEQISMVMMEANAHHLLYSAEDDAENNDASPNFLH >gi|333596726|gb|GL892086.1| GENE 969 1019905 - 1020828 1404 307 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|218548371|ref|YP_002382162.1| ribosomal protein S6 modification protein [Escherichia fergusonii ATCC 35469] # 8 307 1 300 300 545 91 1e-153 MSLERCRVKIAILSRDGTLYSCKRLREAAAKRGHQVEILDPMSCYMNIDPAASSIHYKGR KLPHFDAVIPRIGSQITYYGTAALRQFEMLGSYPLNESVAISRARDKLRSLQLLARQGID LPVTGIAHSPDDTSDLIDMVGGAPLVIKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAH ILVQEYIKEAKGRDIRCFVVGDEVVAAIERQAKEGDFRSNLHRGGIARVALISEREREIA VKAAQTLGLDVAGVDLLRAERGPLVMEVNASPGLEGVEKTTGVDIAGKMIAWIERHATPG FCLKTGG >gi|333596726|gb|GL892086.1| GENE 970 1020872 - 1021594 1004 240 aa, chain - ## HITS:1 COG:ECs0931 KEGG:ns NR:ns ## COG: ECs0931 COG0778 # Protein_GI_number: 15830185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 422 86.0 1e-118 MTPTIDLLRSHRSIRHFTDEPITQAQRDAIIDSARGTSSSSFLQCSSIIRITDPAMREQL VTLTGGQKHVAQAAEFWVFCADFNRHLQICPEAELGLAEQLLLGVVDTALMAQNAFTAAE SLGLGGVYIGGLRNNIESVTELLKLPKHVLPLFGLCLGWPADNPDLKPRIPAAMLVHENH YQPVDQDVLNQYDEELANYYLTRDSNNRRDTWSDHIRRTIIKENRPFILEYLHKQGWATR >gi|333596726|gb|GL892086.1| GENE 971 1021780 - 1022049 436 89 aa, chain + ## HITS:1 COG:STM0872 KEGG:ns NR:ns ## COG: STM0872 COG0695 # Protein_GI_number: 16764234 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 87 1 87 87 168 89.0 2e-42 MFAVIFGRPGCPYCVRAKELAEKLTEERDDFNFRYVDIHAEGITKADLEKTVGKPVETVP QIFLDQKHIGGCTDFEAYAKEHLGLFAAQ >gi|333596726|gb|GL892086.1| GENE 972 1022080 - 1022391 154 103 aa, chain - ## HITS:1 COG:no KEGG:ECL_02824 NR:ns ## KEGG: ECL_02824 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 1 103 22 125 127 145 81.0 7e-34 MSLAFNVKGAFRASGHPELGLLFFILPGAVASFLSRKGEVVMPLIGAMLAAPLCLLLMRL LLISSRSVWQEVAWLLSGVFWCALGALCFLFTRSLLQQRKHRK >gi|333596726|gb|GL892086.1| GENE 973 1022729 - 1024414 2027 561 aa, chain + ## HITS:1 COG:STM0870 KEGG:ns NR:ns ## COG: STM0870 COG2985 # Protein_GI_number: 16764232 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 561 1 561 561 1024 97.0 0 MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTD ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGL TAGMLAGSMTSTPVLVGAGDTLRHSGMAGTQLSAALDNLSLGYALTYLIGLVSLIVGARY LPKLQHQDLQTSAQTIARERGLDTDSKRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYR QTGCYIERIRRNGILANPDGDAVLQMGDDIALVGYPDAHARLDPSFRNGKEVFDRDLLDM RIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD ARRVKTVADRIGFISIHSQVTDLLAFCAFFIVGLMIGMITFQFSNFSFGIGNAAGLLFAG IMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGSGIGNGLGAVGWQMLVSGL IVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYA IANVLLTLAGTLIIIIWPGLG >gi|333596726|gb|GL892086.1| GENE 974 1024761 - 1025360 207 199 aa, chain + ## HITS:1 COG:no KEGG:Plut_0837 NR:ns ## KEGG: Plut_0837 # Name: not_defined # Def: hypothetical protein # Organism: P.luteolum # Pathway: not_defined # 6 186 9 190 193 217 57.0 2e-55 MFDFYPEKIYSRVEVMGKPSPVPPVNGVYFWWFKEIPPGVPTDGCITYAAYTLLYVGISP DQRGKPNSRSNLRTRIKTHYSGNAAGSTLRRTLGVLLSSVSSFPLRRVGSGSRMTFTHPG EQWLDVWMENNAKVHWFPAEAPWKLEDTLIASLSLPLNIQGNAHDFKMTLSGMRSKAAAQ ARLMEIADERGFRRRLAAQ >gi|333596726|gb|GL892086.1| GENE 975 1025493 - 1025705 79 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYDCATYHSKLSPSMQTLMVFVQGGMYPQGMSLLKVYRIGVTFIFRYLPAYSVFHLRRAQ YVKVVSLNIK >gi|333596726|gb|GL892086.1| GENE 976 1025853 - 1027574 829 573 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1341 NR:ns ## KEGG: Ent638_1341 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 31 573 16 558 558 792 88.0 0 MEHSSLTLLELKDFEMDLFLVVVLLLALSAPILAVILLKKNKQHKVEVEKLNHQNITLSH ELSENQERLAQAIREHSELEGKAASLWQYEELHSAVLEAEKKIKTADSIATNKINEAQLK ASSVILEANNHARLTISNANNEATIITKEARNARLKAKEKLDNANSRADELISNANDNAV NIITDAENRAKQIAGSAYEAKEFAETYQAVAKSMKNKIEGYGDEWIIPNRSVLDELADNY EFTDAGKELQKTKELTRSLIKTSKAASCEYVESNRRNTAIKFVLDAFNGKVDSTLSKIKH NNYGKLSQEIKDAFELVNFNGSAFRSARITDIYLQARLNELKWGVAVNEIMLEEKEEQRR IKEQLREEEKARREYEKAIKEAEKEEKAIQQAIEKATKELMLAGEEQRLALEEKLAELQI KYEEAEAKNQRAISMAQQTRSGHVYVISNIGSFGENVYKIGMTRRLEPLDRVRELGDASV PFSFDVHAMIYSDDAPSLENHLHKVFNDKQVNKVNSRKEFFNVGIKDIKSTIQKMNIDAH WTMFAEAKEYRESLAIENERNAAFIDNDELVVA >gi|333596726|gb|GL892086.1| GENE 977 1027952 - 1028383 429 143 aa, chain + ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 140 1 140 141 233 83.0 7e-62 MSHITIYHNPACGTSRNTLEMIRNSGTEPEIILYLENPPSRDQLTTLIADMGISVCDLLR KNVEPYEQLGLAQGPFTDDQLIDFMLQYPILINRPIVVTPLGTRLCRPSEVVLDILPDAQ KGAFTKEDGEVVVDASGKKISRQ >gi|333596726|gb|GL892086.1| GENE 978 1028404 - 1028955 584 183 aa, chain - ## HITS:1 COG:STM0869 KEGG:ns NR:ns ## COG: STM0869 COG3226 # Protein_GI_number: 16764231 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 3 179 7 183 206 242 69.0 2e-64 MSRPPNDPNRREKILQATLDTIAEHGIHAVTHRKIATCAGVPLGSMTYYFDGMESLLEEA FTWFTQQMSQQYRDFFAGVTGRERACEAITTLIHSSAVTTPHNMALMYQLYAFMHRSAAL KTVMQDWMKMSQTTLEQWFDPATARALDAFIEGMTLHFVTDRAPLSREEIRTMVGRIAGE DTV >gi|333596726|gb|GL892086.1| GENE 979 1028891 - 1030252 1528 453 aa, chain + ## HITS:1 COG:ECs0925 KEGG:ns NR:ns ## COG: ECs0925 COG0477 # Protein_GI_number: 15830179 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 50 448 1 400 402 546 82.0 1e-155 MVSSVAWSIFSRRLGSFGGLLIKSSSGLCTNVHKVASVVAIVVLLVLIPMTLTSPRKALH LRMWALFMFFFIPGLLMASWATRTPAIRDTLSVSTAEMGIVLFGLSIGSMSGILCSAWLV KRFGTRAVIRTTMCCAVAGMLGLSVALWFASPLMFALGLMVFGGSFGAAEVAINVEGAAV EQAMNKTVLPMMHGFYSLGTLAGAGVGMGLTALGIAANVHILLAALVCIIPILTGIRAIP AGTGQNASDEQKSAAKGLPFYRDFQLMLIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPT SGSLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALLGGLGIAMIIFVDVDWIAGVSV ILWGLGASLGFPLTISAASDTGPDAPTRVSVVATTGYLAFLVGPPLLGFLGEHYGLRSAM LVVLGLVIIAALVARAVAKPEAEPTSMEKGYER >gi|333596726|gb|GL892086.1| GENE 980 1030242 - 1031054 959 270 aa, chain + ## HITS:1 COG:STM0867 KEGG:ns NR:ns ## COG: STM0867 COG0561 # Protein_GI_number: 16764229 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 270 1 270 271 395 72.0 1e-110 MSVKLIAVDMDGSFLSDAKTYNRARFLAQYARMKAQGIRFVVASGNQYYQLISFFPEIAH EIAFVAENGGWVVDAGEDVFNGELSKEHFLTVATLLNDVPGIEIIACGKNSAYTLKTYDD LFKEIAAKYYHRLESVSSFDNLNDIFFKFGLNVSDDEIPRIQALLHEKLGDIMVPVTTGH GSIDLIIPGVHKANGLRILQARWGIDDSEVVAFGDSGNDVEMLRQAGFGFAMANARPHIK AVARYEAPNNNDEGVLDVIDKVLDGKAPFN >gi|333596726|gb|GL892086.1| GENE 981 1031121 - 1032353 1760 410 aa, chain - ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 407 1 407 410 661 89.0 0 MINRSSSGNRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYNAGIEWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLTGVVWFIVTCLATLLAQNIEQFTLLRFLQGVSLC FIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWVHVAPWEGMFVLFAAL AAISFFGLHRAMPETATRLGEKLSLKELGRDYKAVLKNGRFVAGALATGFVSLPLLAWIA QSPVIIISGEQLSSYEYGLLQVPIFGALIIGNLVLARLTSRRTVRSLIIMGGWPIAAGLI IAAVATVASSHAYLWMTAGLSVYAFGIGVANAGLVRLTLFASEMSKGTVSAAMGMLQMLI FTVGIEVSKHAYAFGGNGLFSLFNLANGVLWVGLMVVFLKDKRVGNALQP >gi|333596726|gb|GL892086.1| GENE 982 1032521 - 1033249 573 242 aa, chain + ## HITS:1 COG:YPO1325 KEGG:ns NR:ns ## COG: YPO1325 COG3907 # Protein_GI_number: 16121607 # Func_class: R General function prediction only # Function: PAP2 (acid phosphatase) superfamily protein # Organism: Yersinia pestis # 4 241 26 266 271 238 56.0 6e-63 MTHAVSPSELSKLPTNKTKRLYRLPVRFYGYQLFVLIVLAVLFTWLSRDESLDRWITGFW YDAATHHFPLQQNPLLDLLNHRLAKYIAIALAAASLIYGAYRRNARLVTAALLMGLGALV VGVLKSISHHSCPWDLVEYGGKAVAYPLFSAIPTDSGPGRCFPGGHASSGFMVMGLFFAF WRERPRLAWTFVAVGAVMGLLMGFGQVMRGAHFFSHNLWAGWWVWFSQVLVYGLVSTWFA KE >gi|333596726|gb|GL892086.1| GENE 983 1033257 - 1033865 897 202 aa, chain + ## HITS:1 COG:STM0865 KEGG:ns NR:ns ## COG: STM0865 COG0671 # Protein_GI_number: 16764227 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 202 1 202 202 285 68.0 4e-77 MLENLNYELFYLLNATPSSPEWMIDLATFIAKDVISIVPALAVILWLWGPRKQVTAQRHL VIKMAMAIGVSVLASYVLGHAFPHDRPFVDRVGYNFLHHAPDDSFPSDHGTVIFTFALAF LFWHRLWSGVVLMGVAVAIAWSRVYLGVHWPLDMVGGFLVGLMGCVSAAILWSLFGPALY RGLSQAYRILFALPIRKGWIRD >gi|333596726|gb|GL892086.1| GENE 984 1033933 - 1034691 756 252 aa, chain + ## HITS:1 COG:STM0864 KEGG:ns NR:ns ## COG: STM0864 COG1349 # Protein_GI_number: 16764226 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 252 1 252 252 440 83.0 1e-123 METRRDDRIAQLLQALKRSDKLHLKEAATLLGVSEMTIRRDLNSDSAPVVLLGGYIVLEP RSASHYLLSDQKTRLVEEKRKAARLAASLVQPHQTLFFDCGTTTPWIIEAIDSTVPFTAV CYSLNTFLALQEKPACRVILCGGEFHASNAIFKPLNIQDTLSNLCPDIAFYSAAGVNVKQ GATCFNLEELPVKQWALNAAQQHVLVVDHSKFGKVRPARMGELSRFDAIVSDCRPDDELV AYAKAQQVKLMY >gi|333596726|gb|GL892086.1| GENE 985 1034777 - 1036003 1538 408 aa, chain - ## HITS:1 COG:dacC KEGG:ns NR:ns ## COG: dacC COG1686 # Protein_GI_number: 16128807 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli K12 # 8 408 1 400 400 743 93.0 0 MDTRVAFMTQKTSSLRSLAAGSALLFLFAPTLHAAEQTAPEAPPVDARAWILMDYASGKV LAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLDDMVTVGKDAWATGNPALRGSSVMF LKPGDQVSVSDLNKGVIIQSGNDACIALADYVAGSQDSFIGLMNGYAQKLGLTNTTFKTV HGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSSNVNVD GMKTGTTAGAGYNLVASATQGDMRLISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIK PDATFVSQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVG TIDFQLNGKSIEQRPLVVMEAVEEGGFFSRIWDFVLMKFHGWFGSWFS >gi|333596726|gb|GL892086.1| GENE 986 1036226 - 1036852 889 208 aa, chain + ## HITS:1 COG:STM0862 KEGG:ns NR:ns ## COG: STM0862 COG0625 # Protein_GI_number: 16764224 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 332 77.0 4e-91 MITLWGRNNSTNVKKVLWTLEELDLPFNQIMAGMAFGVNKDADYLAMNPNGLVPLLRDDE TDATLWESNTIVRYLAAQYGQGRLWVENPAQRAQGEKWMDWANQTLSPTHRVILMGLIRT PEADRDYPAIHAAQDACESLFAMMDDELAKHTWFSGETFGVGDIAVAPFVWNLTNMGLSW TPRPHLERWIQQLSERPAYRNVVMIPVT >gi|333596726|gb|GL892086.1| GENE 987 1036853 - 1037971 1363 372 aa, chain - ## HITS:1 COG:yliI KEGG:ns NR:ns ## COG: yliI COG2133 # Protein_GI_number: 16128805 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli K12 # 1 369 1 369 371 597 77.0 1e-170 MPRSSLIFLPVLLFPLSLLAAPESVKVDVLQTKLDHPWSLAFLPDNKGLLITLKDGQLKH WQAGKGLSDPIVGVPKVWASGQGGLLDVALAPDFAQSRRVWLSFAEAGKDGKAGTAVGYG RLSDDLSRIEGFQVVFRQMPKLSTGNHFGGRLVFDGKGHLFIGLGENNQRPTAQDLDKLQ GKVVRLTEDGKVPPDNPFVNTAGARPEIWSYGIRNPQGMAMNPWSDTLWLNEHGPRGGDE INIPEKGKNYGWPVATHGINYSGLKIPEAKGEHVEGTEKPLFVWKVSPAVSGMAFYNSDV FPQWKNKLFIGALKEKDVIVLSVNGNTVTEDGRILGDKDQRIRDVRVGPDGYLYVLTDET DGQLLKVSPSGS >gi|333596726|gb|GL892086.1| GENE 988 1038079 - 1038462 519 127 aa, chain - ## HITS:1 COG:no KEGG:ECL_02883 NR:ns ## KEGG: ECL_02883 # Name: not_defined # Def: biofilm formation regulatory protein BssR # Organism: E.cloacae # Pathway: not_defined # 1 127 1 127 127 211 90.0 1e-53 MSVDRLKRDLLNKLINARIDLAAYLQLRKAKGYMSVSESENLRDNFFELCNFMREKAPIL KAHYAESEVVALRRAAEVLSIAGVCLMNGRHDCPNFIAVNAEKLENCLTTLALCIMCLNK PETLAHH >gi|333596726|gb|GL892086.1| GENE 989 1038680 - 1040005 1336 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase [Meiothermus ruber DSM 1279] # 22 441 1 420 442 519 61 1e-145 MSNVTHPPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV QESLEAIGEALTENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR LADAGVKELLVISQDTSAYGVDVKHRSGFYNGEPVKTSMVGLCEQLAKLGIWTRLHYVYP YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPDLTL RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP GDIIRVKVENADEYDLWGSRI >gi|333596726|gb|GL892086.1| GENE 990 1040117 - 1040986 1119 289 aa, chain - ## HITS:1 COG:ECs0911 KEGG:ns NR:ns ## COG: ECs0911 COG1173 # Protein_GI_number: 15830165 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 289 15 303 303 478 87.0 1e-135 MPGIRPDHIRTPWGEFWRRFRRQPVAMVAGLFVLLLILVAIVAPWIAPFDAENYFDYDRL NDGPSMMHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVLMGAAIGTVLGLVAGYYEGWWD RIIMRICDVLFAFPGILLAIAVVAVMGSGMANVIIAVAVFSIPAFARLVRGNTLVLKQQT FIESARSMGASDATILFSHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEW GAMLNEARADMVIAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPRIKG >gi|333596726|gb|GL892086.1| GENE 991 1041030 - 1041950 1135 306 aa, chain - ## HITS:1 COG:yliC KEGG:ns NR:ns ## COG: yliC COG0601 # Protein_GI_number: 16128799 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli K12 # 1 306 1 306 306 515 87.0 1e-146 MLNYVCKRLLGLIPTLLIVAVLVFLFVHMLPGDPARLIAGPEADATVIELVRKQLGLDQP LYRQFLRYIGNVLQGDFGISMVSRRPVSEEIASRFMPTFWLTIASMSWAVVFGLGAGIVA AVWRNRWPDKLGMALAVTGISFPAFALGMLLMQIFSVELGWLPTVGADTWKHYILPSMTL GAAVAAVMARFTRASFVDVLSEDYIRTARAKGVSEKWVILKHGFRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLLFSLEFILINLVVDVLYAAIN PAIRYK >gi|333596726|gb|GL892086.1| GENE 992 1041956 - 1043494 2227 512 aa, chain - ## HITS:1 COG:STM0849 KEGG:ns NR:ns ## COG: STM0849 COG0747 # Protein_GI_number: 16764211 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 512 1 512 512 890 87.0 0 MVPFVARKWLLAASVMAALAAAPAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ GLFGLDREMKLKNVLAEGYTVSDDGLIYTVKLRTGVKFQDGTDFNAEAVKVNLDRASNPE NGLKRYNLYKNIARTEVIDPATVKITLKEPFSAFINILAHPATAMISPAALKKYGKEIGF HPVGTGPYELLTWNQTDFVKVKKFAGYWQQGLPKLDTLTWRPVVDNNTRAAMLQTGEAQF AFPIPYEQAALLAKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQALVK VAFAGYATPATGVMPPTIEYAQSYQPWPYDPAKARELLKEAGYPNGFSTTLWSSHNHSTA QKVLQFTQQQLAQVGIKARVTAMDAGQRAAEVEGKGQKESGVRMFYTGWTASTGEADWSL SPLFASQNWPPTLFNTAFYSNPQVDKDLADALKTTKPEEKARLYKEAQDIIWKESPWVPL VVEKLVSAHNKALTGFYIMPDTGFSFDDADLK >gi|333596726|gb|GL892086.1| GENE 993 1043518 - 1045389 819 623 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 12 573 8 529 563 320 34 2e-85 MPHREELDNCEVLAVHQLNIAFQEERQFIPAVQHLSFSLNRGETLAIVGESGSGKSVTAL ALMRLLEQTGGQVTSERMLLRRRNRQVIDLNELSGSQMQGVRGADIAMIFQEPMTSLNPV FPVGEQIAESIRLHQGLSGDEALNEAKRMLELVRIPEAHAILSRYPHQLSGGMRQRVMIA MALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEMEMGVIFITHDMGVVADIADRVL VMHQGNAVETGTVEQVFHAPVHPYTKALLAAVPRLGAMNGSDFPRRFPLFSQTELGQQED ETEQNTVVPGRPILEVRDLVTRFPLRSGVLNRVKREVHAVENVSFDLWPGETLALVGESG CGKSTTGRALLRLVESQEGSITFNGERIDTLPNSNLQAVRRDIQFIFQDPYASLDPRHTV GYSIMEPLRVHNLLDGEAAQRRVAWLLERVGLKPEHAWRYPHEFSGGQRQRICIARALAL NPKVVIADESVSALDVSIRAQIINLLLDLQRDLGIAFLFISHDMAVVERISHRVAVMYMG QIVEIGPRRAVFENPQHPYTRKLMAAVPVADPEHRHAQRVLLQDEMPSNIRKRGETLERV ALREVGPGHFVAPPRQDNAFSRL >gi|333596726|gb|GL892086.1| GENE 994 1045401 - 1046339 976 312 aa, chain - ## HITS:1 COG:Z1051m KEGG:ns NR:ns ## COG: Z1051m COG1446 # Protein_GI_number: 15804993 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Escherichia coli O157:H7 EDL933 # 1 312 1 313 321 479 83.0 1e-135 MSKAVIAIHGGAGAITRAQLSPEQEKRYIDALNAIVETGQRMLEAGDSALDVVTEAVRLL EECPLFNAGIGSVFTRDETHELDACVMDGVTLKAGAVAGVSRLRNPVLAARLVMDHSPHV LMTGAGAEKFAVEHGMDTVSPDLFSTEERYRQLLEARTAGMTQLDHAAPLDERSKMGTVG AVALDKAGNLAAATSTGGMTNKLPGRVGDSPLPGAGCYANNATAAVSCTGTGEVFIRALA AYDITALMDYGGLSLSEACERVVMEKLPALGGAGGLIAVDREGNVALPFNSEGMYRAWGY AGDAPSTGIYRE >gi|333596726|gb|GL892086.1| GENE 995 1046529 - 1047761 1559 410 aa, chain + ## HITS:1 COG:STM0846 KEGG:ns NR:ns ## COG: STM0846 COG0303 # Protein_GI_number: 16764208 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 410 3 412 413 685 82.0 0 MDFTAGLMPLETALSQMLDRITLLHDVETLPLVRCFGRIAARDIVSPLNVPGFDNAAMDG YAVRLADVQTGQPLPVAGKAFAGQPFNGEWPAGTCVRIMTGAPVPKGCEAVVMQEETEQT DDGVRFTASVKAGQNIRCTGEDITLGATVFAAGQKLTVAELPVLASLGIAEIDVVRKVRV AVFSTGDELQLPGQPLNEGQIYDTNRLAVHLMLKQLGCEVINLGIIPDDPQKLRAAFIDA DASADVVISSGGVSVGEADYTKTLLEELGEIAFWKLAIKPGKPFAFGKLPHSWFCGLPGN PVSAALTFYQLVIPLLAKLSGNNASPLPERVRVRAATRLKKSPGRLDFQRGILARNADGE LEVSTTGHQGSHIFSSFSQGNCFIVLERDRGHVEAGEWVEVERFNHLFGG >gi|333596726|gb|GL892086.1| GENE 996 1047763 - 1048515 729 250 aa, chain + ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 4 249 3 248 249 421 84.0 1e-118 MTVELSDPEMMRYNRQIVLRGFDFDGQEALKAASVLVVGLGGLGCAAAQYLAAAGVGSMT LLDFDTVSVSNLQRQTLHGDATVGQPKVESARTALTRINPHVQFTLIDAMLDDDALFAQI ARHDLVLDCTDNVAIRNQLNAGCFAHTTPLISGAAIRMEGQISVFTYAEGEPCYRCLSRL FGENALTCVEAGVMAPLVGVIGSLQAMEAIKVLARYGTPAAGKIVMYDAMTCQFREMKLM RNPGCEVCGG >gi|333596726|gb|GL892086.1| GENE 997 1048605 - 1049267 1002 220 aa, chain - ## HITS:1 COG:ECs0903 KEGG:ns NR:ns ## COG: ECs0903 COG0176 # Protein_GI_number: 15830157 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 220 25 244 244 355 85.0 3e-98 MELYLDTSDVAAVKKLARIFPLAGVTTNPSIVAAGKTPLEELLPALHDALGGKGRLFAQV MATTAEGMVEDARKLRAIINDLVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGMLS ALAGAEYVAPYVNRVDAQGGDGIQTVVELQQLLTLHAPQSKVLAASFKTPRQALDCLLAG CESITLPLDVAQQFITSPAVDAAIVKFEQDWQGAFGRTSI >gi|333596726|gb|GL892086.1| GENE 998 1049395 - 1050294 970 299 aa, chain + ## HITS:1 COG:ybiY KEGG:ns NR:ns ## COG: ybiY COG1180 # Protein_GI_number: 16128792 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 299 10 308 308 502 81.0 1e-142 MIFNVQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRSRTRDVLFDARLCLEGCDLCQQ AAPGCVERALNGLVIHREKLDEATLNALTDCCPTQALTVCGEEKQVEEIMATVLRDKPFY DRSGGGITLSGGEPFMNPTLAHALFKASHEQGIHTAVETCLHVPWHYIEPSLPYVDLFLA DLKHVDSDVFKQWTDGSAKRILDNLKRLAAAGKKITIRVPLIQGFNADEASVTAITNFAA DELGVEDIHFLPYHTLGMNKYTLLGQPYSAPDKPLDNPALLDFAQQYACQKGLTATLRG >gi|333596726|gb|GL892086.1| GENE 999 1050299 - 1052731 3318 810 aa, chain + ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 810 1 810 810 1613 93.0 0 MTTLNLNTLSERIKAHKMALVHIVKPPVCTERAQHYTEMYQQHMDKPIPVRRALALAHHL AKRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVL HEICPWWRGQTVQDRCYGMFTDEQKGLLETGIIKAEGNMTSGDAHLAVNFPLVLEKGLDG LRAKVAERRSRINLTVLEDLHGDQFLKAIDIVLEAVSLHIKRFADLAREMAASETFDSRR DELLAMAENCDIIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFARMDQYLYPYYRRD VELDQSLDREHAIELLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQKLVNGEPM DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGVEREDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGRDATSGK VFLPQEKALSAGNFDNFDEVMAAWDSQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGAIGQQQLAAALADDFD GLTHEQLRQRLINGAPKYGNDDDSVDMLLTRAYQTYIEELKQYHNPRYGRGPIGGNYYAG TSSISANVPFGAATMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTEAILGG VLLNQKLNPSTMENDSDRQKLMVLLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDL VVRVAGYSAFFTALSPDAQDDIIARTEHTL >gi|333596726|gb|GL892086.1| GENE 1000 1052898 - 1053713 1060 271 aa, chain + ## HITS:1 COG:ybiV KEGG:ns NR:ns ## COG: ybiV COG0561 # Protein_GI_number: 16128790 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 271 1 271 271 457 80.0 1e-129 MTVKVIVTDMDGTFLDDAKQYDRDRFQAQFEQLNARDIEFVVASGNQYYQLISFFPELKD QISFVAENGALVFDHGEQIFHGELTRHESQIVIGELLKDKGLNFVACGLESAYVSDKAPE AFVALMSKHYHRLKRISDYREIDDVLFKFSLNLPDSDIPNLVDKLHVSLDGIMKPVTSGF GFVDLIIPGLHKANGISRLLKRWKISPQECVGIGDSGNDAEMLKLVKYSFAMGNAAESIK EISRYSTDDNNHQGALNVIQAVLDAHSPFDA >gi|333596726|gb|GL892086.1| GENE 1001 1053865 - 1055121 1522 418 aa, chain + ## HITS:1 COG:no KEGG:ECL_02898 NR:ns ## KEGG: ECL_02898 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 417 1 417 418 836 96.0 0 MTFTSETLPADHKAAIRQMKRELRAQIGDVQAVFDRLSDKIATRVAEINALKNKGETVWP VIPFTDVKNGTITDTQREAIKRRGCAVIKGHFPREQALAWDQSMLDYLDLNKFDEVYKGP GDNFFGTLTASRPEIYPIYWSQAQMQARQSEEMAQVQSFLNRLWTFESNGKQWFDPDVSV IYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFARVFDGNVDKYDPWNAAHRTE VEEYTVDNTTKCSVFRTFQGWTALSDMIPGQGLLHVVPIPEAMAYILLRPLLDDVPEDEL CGVAPGRVLPISEKWHPLLIEALTSIPALEAGDSVWWHCDVIHSVAPVENQQGWGNVMYI PAAPMCEKNLAYAKKVKEALETGASPGDFPREDYEKSWQDRFTVNDLNIHGKRALGMV >gi|333596726|gb|GL892086.1| GENE 1002 1055118 - 1056191 1056 357 aa, chain - ## HITS:1 COG:YPO0846 KEGG:ns NR:ns ## COG: YPO0846 COG1609 # Protein_GI_number: 16121154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 356 1 359 360 389 53.0 1e-108 MDKRLKINEIAARTQLSISTVSRVLAGKANTSEKARAKVLACARELGVMDGMAAGRLLLN SLVVFAPQRAFDERSDIFYYRVIQSVSKGLASHEVRLRYCALEENDSDAQLFLARMNEAD TQAAILLGIDDPHIHDLAVDVGKPCMLINCRDRHMRLLAVAPDHRAIGERAAEYLFEMGH REVMNVLCLRRYTMELRLSGIRDAWHGHNLRFSDRRDLLVVPSFSARETEQLVSEWLHQQ QGKDLPTAFLVGGDFMAAGTISALQNHGLRVPQDVSVMSIDGFNLAAIQDVPLTAVHVPR DELGTEAVHMLQQRLMRPDAPVGTLLLNGTLTVRESVRRIRQGKRRTAVEREGLYDS >gi|333596726|gb|GL892086.1| GENE 1003 1056478 - 1057779 1714 433 aa, chain + ## HITS:1 COG:YPO0847 KEGG:ns NR:ns ## COG: YPO0847 COG0477 # Protein_GI_number: 16121155 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 431 1 430 435 626 75.0 1e-179 MSQDINNTVATSKTRRVIRNLRWYVLVLFLLGVTVNYITRNSLGILAPELKESLGITTEQ YSWIVGAFQIAYTIFQPLCGWLIDVIGLKIGFMVCAGIWALMCIFHAGAGSWLHLAILRF CMGASEAAATPANAKTIGEWFPKSERPVAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGA FMFTGVLALLWVILWWAFYHNPEQHPNLSRDELAFIKQDNEPAPVKLPFLTALKTVSKNK RFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVASGYLT RLYTRWFGCTRVNSVVASSVTGAFLMISLAVVAVTRDPYITIVLISIGGFGHQIISCMLS ALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLLGAVF LVAFIAERRAKRA >gi|333596726|gb|GL892086.1| GENE 1004 1057797 - 1060160 3190 787 aa, chain + ## HITS:1 COG:YPO0848 KEGG:ns NR:ns ## COG: YPO0848 COG1501 # Protein_GI_number: 16121156 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Yersinia pestis # 1 782 2 783 792 1239 74.0 0 MKTLKNWTVDTQSANHLELLVDNQHRLCLYVLEENLFRVLIKRKGELALDRTWSIAPEQD VPWEGRRRDDLSGFSCPAWTLTQQGDTLTVATEQLRVTVHQPLWLEWHYRNEAGEWQPLV NDRPTSAYLLNAHGDGVAHYLSRRKDERFYGLGEKAGDLQRNGKRYEMRNLDAMGYNAAS TDPLYKHIPFTLTRRDDVSYGLFYDNLSSCWLDLGNEIDNYHTAYRRWQAEAGDIDYYIF TGKRVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHYTDAPDAQNQLMNFIRLCDEHAIPC DSFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSQAFHDAGLKLAANIKPCLLQDHPRYSE VAERGLFIRDSETDAPERSSFWDDEGSHLDFTNPQTVQWWQNGVTTQLLEMGIDSTWNDN NEYEVWDGEARCFGFGQEIAIKHIRPVMPLLMMRASLEAQQRFAPEKRPYLISRSGCAGM QRYVQTWSGDNRTNWDTLRYNIRMGLGMSLSGLFNVGHDVGGFSGDKPDAELFVRWVQNG VMHPRFTIHSWNDDRTVNEPWMYPGVTPAIRSAIELRYRLLPYLYTLLWQAHADDEPMLR PTFLDHEHDAQTFEECDDFLLGRDLLVASVVEAGQRERRVWLPDNDTGWYDFYTHAWYAG GQSIVLDAPLEKLPLLVRAGAGLPLSERIRHVSADKDDTRELKLFPVKGVGTTSGLLFED DGESWGYQNGNALWVEWEMVCDGATINLKVNARGDYRPAWKALKVSLPVGEKRTLRVNGV EGGEWVL >gi|333596726|gb|GL892086.1| GENE 1005 1060254 - 1061825 2274 523 aa, chain - ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 522 9 530 530 1000 94.0 0 MQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGK LRQDQFAFEEFTVLDTVIMGHAELWEVKQERDRIYGLAEMSEEDGYKVADLETQYGEMDG YSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDI DTIRWLEQTLNDRDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR ERLLADNAKKKAQIADLQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIR FEQDKKLFRNALEVEALSKGFDDGPLFKNFNLLLEVGEKIAILGANGVGKSTMLKTLVGE LQPDNGTVKWSENAQIGYYAQDHEYEFENDLTVFDWMSQWKQEGDDEQAVRSILGRLLFS QDDIKKPAKVLSGGEKGRMLFGKLMMEKPNILVMDEPTNHLDMESIESLNMALEMYQGTL IFVSHDREFVSSLATRVIEITPERVVDFTGNYEDYLRSKGIES >gi|333596726|gb|GL892086.1| GENE 1006 1062072 - 1062992 1266 306 aa, chain + ## HITS:1 COG:ECs0896 KEGG:ns NR:ns ## COG: ECs0896 COG1376 # Protein_GI_number: 15830150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 540 88.0 1e-153 MNMKLTTLFAAALAVVGFCKTASAVTYPLPTDGSRLVGENQVVTVPEGNTQPLEYFAAQY QLGLSNMLEANPGVDPYLPKAGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTV IVLPIGIGQLGKDTPLNWTTKVERKKAGPTWTPTAKMHAEYIAAGEPLPAVVPAGPDNPM GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFDNVPVGTRVQFINEPVKA TSEPDGSRYIEVHNPLSTSEDQINNNEIVPITLTSAVQSVTSQADVETAIVDQAIQNRSG MPVRLN >gi|333596726|gb|GL892086.1| GENE 1007 1063037 - 1063753 961 238 aa, chain - ## HITS:1 COG:lin0901 KEGG:ns NR:ns ## COG: lin0901 COG2188 # Protein_GI_number: 16799974 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 4 237 3 234 237 203 45.0 2e-52 MAAKYITIAREIKKRIISQHYAANEPLPDQFALAAEFSTSRMTIQQAMRQLIVEGLVYTR QGQGTFIRKNFLQLSQWDLSGSDYFGATKTWEHLGTVTSQVVHFELRFPNEKEQASLMIN PDTPIYDFIRLRLLNGEPMSLDATVMPLNLVPGLNKTHLESSVFQYVQETLGLKIMGSYR VVRALKPSALDMQHLVGEQTDPVLEVEQVIYLEDGTPLEYAHCHYRYDHGGIVIVNNG >gi|333596726|gb|GL892086.1| GENE 1008 1063768 - 1065063 1426 431 aa, chain - ## HITS:1 COG:SP2022 KEGG:ns NR:ns ## COG: SP2022 COG1455 # Protein_GI_number: 15901843 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 4 422 6 424 431 412 52.0 1e-115 MQSFVDRFVEFSARLANQVHLRSLRDAFATVMPIFILAGLAVLVNNVVFPWVLEGDTLTQ FKVWGEAIINGTLNIAALLLAPMIAWSLARNKDFDNPVSAVVIAVSSFIIMMPMRLQITP VGSDAAVSVTQVLTFANIGSTGIFAGVLIGLLSTELFIAISRLKALHISLGENVPPAVSK SFTALIPTILTLSLFAVLAAILANVLHTDLIHLITTFIQQPLRLINTSLPGTIFIYSFGN FLFTLGIHQSVVNSVVLEPFLLINTNENMLAFANGQPIPHIINNIFVPTFGMVGGTGSTI SLLIAIFIFSRQKSAKQVARLSLAPGLFNINEPVIFGLPIVFNLPLMIPFVLLPAIGIYF AWLCTTLGLMSRCVVMIPWTTPPILSAWLATAGDWRAVVVQLAIIVFGVFFYLPFLKVAE RVALKNSGIEN >gi|333596726|gb|GL892086.1| GENE 1009 1065142 - 1066518 1832 458 aa, chain - ## HITS:1 COG:L32812 KEGG:ns NR:ns ## COG: L32812 COG2723 # Protein_GI_number: 15672801 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 458 1 452 453 502 52.0 1e-142 MNNLLPANFLWGNSVSSMQTEGAWNEGGKGMSVYDIREAGENTSDWKVATDSYHRYREDF DLMQDLGMNCYRFQISWSRVCPLGDGPFNDEGIAFYDRFIDDLIARGIEPMVCLYHFDMP LALAQAYNGFNDRRVMEAFIRYGKKMIDCFGDRVKYWLTFNEQNIFHMPEAFRISGYLKG EQTLRELYELQHHTMVAHMSLTEYLHQTKPGQLMGGMLAHQLIYPATCKPRDIFCAQQYD EFLNQNLLRVFAGQGYSPAVMAVVEQEGFGDIYRAEDLALLARTKNDYMAFSYYASKTLD SDAIPEGTPVNYYLLHGEKNNPYLKATEWNWQIDPLGFRTIITRYANDWRMPVFPIENGI GVIESWDGVNPIEDTYRIDYHRAHIEAMKEAMFEDGAEVIGYLGWGLIDILSSQGDMRKR YGVVYVNRENHDLKDLKRVPKKSYAWLKQVIHTNGREM >gi|333596726|gb|GL892086.1| GENE 1010 1066801 - 1068324 466 507 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 9 488 8 457 460 184 28 2e-44 MIHRRLHPLMIMMLLAGCAVGPDYQPPAPPATTHWNDKGDSAVKSQTSSAAANPRWWKTF GSPQLDSLIERAIAGNLTLQQTVLRIAGAREQINQAGGAFFPSVNGNVQATRQQLGLEGE LKSHGVYDQLDNIDPELRGALGPLTQPINLYQGSFDAQWEIDLWGKVRRQVEAAEAQQKA AIEQRNDALVSLEAEVARAWLQLRGAQSIIATLNTQIESAQQTLDLTESRQRGGLSPQMD VENARAQLGNLEAQLPQYQAQERQAMNGLAILLGKPPGALDAELQSVQPMPALPDIVQTG IPSTLARRRPDVREAEANLHAATAQIGVSVAQLFPSFTLSGQFGLRNSESNWLTDWSSHF YSFGPQVSIPIFQGGRLVSSVKVARAQQGAAVLDYRQTVLTALGDVENALVSYRTDQQRE AGLAKTIDALQNAFDLASDSYRQGIASFIDVLDAQRQLAQAEQQRAQAQVQSALDLVALY KALGGGWEPYQQVQLPDYSVFGDAPRG >gi|333596726|gb|GL892086.1| GENE 1011 1068324 - 1069895 1984 523 aa, chain - ## HITS:1 COG:YPO3268 KEGG:ns NR:ns ## COG: YPO3268 COG0477 # Protein_GI_number: 16123425 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 18 513 14 499 511 311 36.0 1e-84 MTDHSHDNWKPASNPWAVAIVVTLAVFMEILDTTIVNVALPHVAGSLSASYDESTWVLTS YLVANGIVLPISAFLSRLFGRKQFFLICIVMFTICSFLCGIATELWQIILFRVMQGFFGG GLQPTQQSVLLDYFKPEDRGKAFGLSSIAIIVAPVLGPTLGGWITDNYSWRWVFFINIPV GIVTVLAIYQLLEDPPWEKKSEEKLTVDWTGIGLIALGLGCLQVMLDRGEDDDWFYSNFI RTFAVLTLVGIIGAIYWLMYARKPVVDLHCMKDRNFAVSSLLMAGMAMILYGSSVVIPQL AQQDLGYTATWSGLVLSPGAVLIVLTIPLVLKLMPVVQTRWIIAFGFTCLAVSFFWSRTL TPDIDFETLVLFRSAQSIGLGFLFVPLTTIAFISIPRRLNADAAALFTMFRNVAGSIGIS LSTAAITERSQAHSAHLAYHASPFNEQFQLAIRESAQAIQNFTTQVGDPTGIATGRMYQT MIEQSRFLAYIDVFTILSAVALVLIPFCLLLSPVKSEGSAGAH >gi|333596726|gb|GL892086.1| GENE 1012 1069892 - 1070986 1322 364 aa, chain - ## HITS:1 COG:mll0995 KEGG:ns NR:ns ## COG: mll0995 COG1566 # Protein_GI_number: 13471111 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Mesorhizobium loti # 44 361 73 384 417 194 42.0 2e-49 MAEDQNPPADEQDKNNNERKRPGKKPLIILGIVVIVMVIVALVWWFLTRNEETTDDAFTD GDVVTIAPKTAGYVTELRVRDNQRVKKGDVLVVIDPRDTTAQRDQAQAQLGLAIAQLHQA QAQLALSKVQYPAQRDEAKAQVLKAQADMANAQAEYRRQRGVDPRATTQQSIDAANAQLR SAQAGLASAQAQLEVAEQVQLQIRQQETNVEARERQVDQARAQLETANLNLSYTEVRAPF DGFVTKRNVQPGTLVQAGTALFSLVSPNVWVVANFKESQLERMKPGDKVTVSVDAWPDME LEGHIDSIQQGSGSRFSAFPSENATGNFVKIVQRVPVKIVIDKGLDPNKPLPLGLSVEPK VTVE >gi|333596726|gb|GL892086.1| GENE 1013 1071088 - 1072197 1283 369 aa, chain - ## HITS:1 COG:ECs0895 KEGG:ns NR:ns ## COG: ECs0895 COG0471 # Protein_GI_number: 15830149 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 369 1 369 372 504 79.0 1e-142 MNIPGLQALKRDRFFHLLLLIGVGLSVFVPFAPQTWPAAIDWRTIITLSGLMMLTKGVEL SGYFDVLGRKMVRRFATERKLALFMVFSAALLSTFLTNDVALFIVVPLTLTLRKLCEIPV TRLIIFEALAVNAGSLLTPIGNPQNILLWGRSGLSFTAFTGQMAPLALAIVATLLAVGWF AFPNKSLQYHSGTTGPQWQPRLVWSCLGLYIVFLTALELNQALVGALLVACGFLFLARRV LVSVDWTLLLVFMAMFIDVHLLIQLPVLQNVLHSVSGLSQPGLWLTAIGLSQVISNVPST ILLLNYVPPTVLLAWAVNVGGFGLLPGSLANLIALRMANDRRIWWRFHLWSIPMLLWSAA VGFGLFLLI >gi|333596726|gb|GL892086.1| GENE 1014 1072194 - 1072667 532 157 aa, chain - ## HITS:1 COG:STM0835 KEGG:ns NR:ns ## COG: STM0835 COG1321 # Protein_GI_number: 16764197 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 247 89.0 7e-66 MNRRAGKPTTKKTTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDM AARLGVSQPTVAKMLKRLASVGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG VSPEIARRDAEGMEHHVSEETLVRFREFTLKYGPSAE >gi|333596726|gb|GL892086.1| GENE 1015 1073249 - 1074832 1862 527 aa, chain + ## HITS:1 COG:ybiP KEGG:ns NR:ns ## COG: ybiP COG2194 # Protein_GI_number: 16128783 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 525 1 526 527 918 84.0 0 MNVTLIDTLVTRSRALSPWTGFYFLQSLLINFALGYPFSLLYAVGFTCILHLLWRSAPRV QKVLIGICSLVAAAYFPFGQAYGAPNFNTLLALHSTNMEESTEILTIFPWYNYVVGLFIF GLGVIAVRRKQVEKKAWGKIESLCLAFSVVTFFVAPVQNLAWGGVFKLKDTGYPVFRFVK DVVVNNEEVLDEQARMAELSTMKDTWNVLAVKPKYHTYVVVIGESARRDALGAFGGHWDN TPFASTVNGTLFTDYVAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSN QGQIGEYDTAIASIAKRADEVQFLKSGDFEADKNTQDEALLKMTAQVFATQRTQPQLIVL HLMGSHPQACDRTQGKYTEFVQSKETSCYLYTMTQTDDLLSKLYAQLRNSGDSFSMVYFS DHGLAFKERGKEVQYLAHDDKYQQNFQVPFMVLSSDDKTHRIIKARRSANDFLKFFSQWT GIKAKEIKNDYPFISGKKGPPVYITNFKLQKVDYNHLGTDIFDIKSK >gi|333596726|gb|GL892086.1| GENE 1016 1075329 - 1075847 535 172 aa, chain - ## HITS:1 COG:STM0833 KEGG:ns NR:ns ## COG: STM0833 COG3637 # Protein_GI_number: 16764195 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Salmonella typhimurium LT2 # 1 172 1 171 171 255 85.0 3e-68 MKKIACLSALAAVLAVSAGTAVAATSTVTGGYAQSDMQGVMNKTNGFNLKYRYEQDNNPL GVIGSFTYTEKDRTENGSYNKGQYYGITAGPAYRLNDWASIYGVVGVGYGKFQQTENEGL NRTASNSDYGFSYGAGMQFNPIENVALDFSYEQSRIRNVDVGTWIAGVGYRF >gi|333596726|gb|GL892086.1| GENE 1017 1076202 - 1077089 936 295 aa, chain + ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 409 81.0 1e-114 MPGLPRKSSVWMPVAVILIAMMSIQSGASLAKSLFPLVGAPGVTALRIALGTLILVVIFK PWRLRFKKEQRLPLLFYGLALGGMNYMFYLSIQTIPLGIAVALEFTGPLAVALFSSRRPV DFIWVILAVLGLWFLLPLGQSVSQVDLTGAALALGAGACWAVYILTGQRAGEEHGPATVA LGSLIAAIIFVPIGMAQATDSIWQWSILPVGLAVAILSTALPYSLEMIALTRLPTRIFGT LMSMEPALAAISGMIFLGETLTLVQTLALCSIIAASMGSTLTMRPEPKVQKIDLN >gi|333596726|gb|GL892086.1| GENE 1018 1077388 - 1077891 752 167 aa, chain + ## HITS:1 COG:STM0831 KEGG:ns NR:ns ## COG: STM0831 COG0783 # Protein_GI_number: 16764193 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 297 95.0 5e-81 MSTAKLVKTKASNLLYTRNDVSDSDKKATIELLNRQVVQFIDLSLITKQAHWNMRGANFI AVHEMLDGFRTALVTHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHTVQDHLKE LADRYAIVANDVRKAIGEAKDEDTADIFTAASRDLDQFLWFIESNIE >gi|333596726|gb|GL892086.1| GENE 1019 1078253 - 1078996 1147 247 aa, chain + ## HITS:1 COG:ECs0889 KEGG:ns NR:ns ## COG: ECs0889 COG0834 # Protein_GI_number: 15830143 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 247 1 248 248 437 95.0 1e-123 MKSVLKVSLAALTLAFAVSSQAADKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAVAKEL KLDYTLKPMDFSGIIPALQTKNVDLALAGITITEERKKAIDFSDGYYKSGLLVMVKADNN DVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTP NILYFIKTAGNGKFKAVGDSLEAQQYGIAFPKGSDDLRNKVNGALKTLKENGTYNEIYKK WFGSEPK >gi|333596726|gb|GL892086.1| GENE 1020 1079090 - 1079749 982 219 aa, chain + ## HITS:1 COG:STM0829 KEGG:ns NR:ns ## COG: STM0829 COG0765 # Protein_GI_number: 16764191 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 363 95.0 1e-100 MQFDWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIE VIRGTPIVVQVMFIYFALPMAFTDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGF SEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI IAGNFRALEIWSAVAVVYLIITLVLSFVLRRLERRMKIL >gi|333596726|gb|GL892086.1| GENE 1021 1079746 - 1080468 585 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 229 47 3e-58 MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKAAAEALAKDL LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ DLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQALIANPPSQRLQEFLQHVS >gi|333596726|gb|GL892086.1| GENE 1022 1080589 - 1082799 2091 736 aa, chain + ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 430 736 1 311 311 525 90.0 1e-148 MPWILLLLLSLFSAPSLAVTLPGVTTGATATQQNAPPEPDAEQKKAAYGALADVLENDTS RQELIDQLRKVAATPPQDPVPAIAPPEAEEEKTVLENVTDISRRYGEALSSRFAQLFRNL VGTSHKPFNPHTFSAAATQFAILAGAVFIFYWLLRLSVWPLYRKMGQWGRKKNQHKSSWL HLPAMITGAFIIDLLLLALTLFVGQMLADRLNTGNKTIAFQQGLFLNAFALIEFFKALLR LIFCPRVPDLRPFAISDQSAKYWAVRLSVLSGLIGYGLLVAVPIISNQVNVQFGALANVL IMLCITVWALYLIFHNKKAITDSLLHLADRSLSFFSLFIRAFALVWHWLASAYFIVLCFF SLFDPGNSLKFMMGATFKSLAIIGIAAFVSGLLSRWLSKTITLSPQVQRNYPELQKRVNG WMTVSLKVARILTVCVAIMLLLNAWSLFDFWNWLHNGAGEKTVDILIRIALILFFSAVGW TLLASLIENRLVSDVHGRPLPSARARTLLTLCRNALAVIISTITIMIVLSEIGVNIAPLL AGAGALGLAISFGSQTLVKDIITGIFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQ DTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKAKQALRDAVSELMEMEDIRG LVIGEPSFAGIVGLTNTAFTLRVSFTTQPLKQWTVRFALDSMVKKHFDLANVRAPVQTYQ VLSPPASPLPPQEPTL >gi|333596726|gb|GL892086.1| GENE 1023 1082845 - 1083756 1021 303 aa, chain - ## HITS:1 COG:ybiN KEGG:ns NR:ns ## COG: ybiN COG3129 # Protein_GI_number: 16128775 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli K12 # 1 303 28 329 335 508 77.0 1e-144 MTSQKPGLHPRNRHRSRYDMKALCQSCPALQDFIVQTPAGEPSVNFADPLAVKTLNKALL AHFYGVTHWDIPEGFLCPPVPGRADYVHHLADLLADDNGGVVPKQATVLDIGTGANLIYP LIGAHEYQWRFTGSETGAEAFASAQAIINANPGLSRAVRLRRQKDAAAIFNGIIHKNEHY DATLCNPPFHDSAASARAGSERKRRNLGQAEDGALNFGGQQQELWCEGGEVAFILRMIAE SKGFGRQVKWFTTLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMDDNK RRK >gi|333596726|gb|GL892086.1| GENE 1024 1083999 - 1084262 330 87 aa, chain + ## HITS:1 COG:no KEGG:ECL_02926 NR:ns ## KEGG: ECL_02926 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 87 1 88 88 123 87.0 2e-27 MKKYLTLIIAGALAGASFSAWSVQPLTDSTDTSQLRAAGTVSVSRASNLDDLQDKLAEKA RQEGAKGFVVNAAGGDNHMYGTATIYK >gi|333596726|gb|GL892086.1| GENE 1025 1084386 - 1084652 265 88 aa, chain + ## HITS:1 COG:ybiI KEGG:ns NR:ns ## COG: ybiI COG1734 # Protein_GI_number: 16128771 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli K12 # 1 88 1 88 88 135 86.0 1e-32 MASGWANDDAVNEQINSTIEDAVARARGEIPRGESLTECEECGEPIPEARRKAIPGVRLC IACQQEKDSKNAAHSGYNRRGSKDSQLR >gi|333596726|gb|GL892086.1| GENE 1026 1084938 - 1085198 371 86 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1291 NR:ns ## KEGG: Ent638_1291 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 86 38 123 123 102 81.0 5e-21 MKTIKYAVAAVALSALSFGAFAVEPVSSTQAQDLNKIGVVSAEGATTLDGLEAKLAEKAA AAGASGYTITSTNGNNKLSGTAVIYK >gi|333596726|gb|GL892086.1| GENE 1027 1085315 - 1086184 1032 289 aa, chain - ## HITS:1 COG:STM0822 KEGG:ns NR:ns ## COG: STM0822 COG0547 # Protein_GI_number: 16764185 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 289 32 322 324 441 76.0 1e-124 MLNGDVPELEMGGILIALRIKGEGEAEMRGFYEAMQAQTMRLTPPVTKPMPVVIPTYNGA RKQANLTPLLAILLQKLGFPVVVHGVSEDPTRVLTETILELLGIEPTLHAGQAQAKLEGN QPVYIPVRALCPPLEKQLDMRWRMGVRNSAHTLAKLATPFAEDAALRLSSVSHPEYVTRV GQFFAEIGGRALLMHGTEGEVYANPQRCPQLMLIEPAGTRVVLERGEENSDVILPESKDP QVTAHWIVQCLAGKVPVPQSIKLQMACCLLAAGEVESVDAGLQRVAQSF >gi|333596726|gb|GL892086.1| GENE 1028 1086534 - 1087070 428 178 aa, chain + ## HITS:1 COG:ECs4670 KEGG:ns NR:ns ## COG: ECs4670 COG3539 # Protein_GI_number: 15833924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 26 177 24 198 200 85 38.0 4e-17 MNKVALGLFIAATVGCSASAFAATNGEGQINFNGEIIDSACQVVNGLSNPLNVELGKVSK TVFTGAGSTSTLTKFNIELTNCPETVTSAAINFGGTPDVNNNTALAITPDTDAATGVAIQ LVDDSGQPVSLYTPSKEYPLTSGTAVNDLEFGARYIQTQAAITAGPANSVSTFTVIYN >gi|333596726|gb|GL892086.1| GENE 1029 1087140 - 1087814 591 224 aa, chain + ## HITS:1 COG:STM0176 KEGG:ns NR:ns ## COG: STM0176 COG3121 # Protein_GI_number: 16763566 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 19 213 22 217 227 204 50.0 1e-52 MRHGYLLSTLLLVAASAHAGVIINGTRLVYQGDKKESSLGLSNPDTTDYLVQSWVDSGSK NPAKAPFLITPPLFRLDAKEDNVLRVVRTGGNLPEDRESLYWLNIKAIPSSKHVEGMNTL QIAINTRIKLLYRPSAVKGKPDDVADQLEWRREGNDLVVNNPTPFYMNFQTVTLNGQKVT KATWAVPKTETHFALPGNVGGSTVAYSIINDYGSVSHTWSKSVH >gi|333596726|gb|GL892086.1| GENE 1030 1087835 - 1090384 2620 849 aa, chain + ## HITS:1 COG:STM4593 KEGG:ns NR:ns ## COG: STM4593 COG3188 # Protein_GI_number: 16767834 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 2 849 1 845 845 737 46.0 0 MIMYSHKKPFTCRFSSLLVILCGLVMAIFAQQVLADDYFNPALLDIDNPQQGMTDLSVYE KGPGQAPGKYQVAVFINNAKIDTRDVTFTLVKDAEGTSTLQPCFSLEDLKSLGIKTQKYP QLMAKGQCADLRAIPAASATFRVRNQQLLLSIPQSALGQVPRGYIDPKEFDEGINAGLLN YSANASQSHARQQGEQDNSSQYVNLRPGLNIGAWRVRNYSTWNRSTTGNEEEHKFTSVYT YAQRDIVAMKSDLTVGQSSSPSDVFDSVPYTGIELKSDNDMLPDSQKGYAPIIRGTAHSN ALVMVRQNGYVIYQNTVAPGAFEINDLYPTGSSGDLQVTVKETDGSESHFVVPYASVPVL QREKNLRYSVTAGRYRAYDKDVEKTPFAQGSAIYGLPYGFTAYGGLQQSSHYQSQAIGAG KNMGDLGAFSIDVTRAKALLKKQQASTGQSWRVRYSKDFAGSGTNFTLAGYRYNSKGFYT LDDTMESYTHSDDWSAPQQRRARTEATIDQTLPEGWGSVTLSMVKETYWSQNQDMTSMSV SYNNSWHVVSYSLSYSMNKNTQDSDEDGNEVTNDNQFSLSVSVPLDRWMHNTWATYNLNN TKDGTTQNIGLNGTALKEDNLNWNIQEGLSSTGSGNSTSLSADYKSTYGEVNAGVSQDQH QQTLNVGVQGGVIAHANGITLSQPLGETIALVKAPGTHGTHIANQTGVETDFRGYTVVPY VTAYRHNTIALDTETLPDDADVTHAAQIVTPTRGAVVRASFNTRVGNRVLMTLTQNGKPL PFGATVTTDDKDSEFIVGNDGQTYLSGLPQQGHLNVSWGQEASEHCVADYALTDEKAKSS IINAAAQCH >gi|333596726|gb|GL892086.1| GENE 1031 1090406 - 1091395 780 329 aa, chain + ## HITS:1 COG:XF0080 KEGG:ns NR:ns ## COG: XF0080 COG3539 # Protein_GI_number: 15836685 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 36 329 24 320 320 67 25.0 5e-11 MQMIKQCFFLLILGTAALFMPHAKATCTTPDLPKMINVASISVPTTLAVGATIPGTEQSV HVAGHCDQSNDSGLEIVSCYYGTGSEIPGLRGVYDSGVPGIGVALMNDQGQRISGAGGIE CDSRGTPVGYVSTDGTQSFNFEVTLELVKTSDTVTSGTLVQSQTEFGIGVFGHEGIGNPN HIAYSGNVILHQVTCSVSPKNLTVNLGDFPVSDFMSVGYLSSPAQNFNVSVNCDTTVQPE LKITSANGYETAFDGVLKLTKQTGMATGVGVRMLFDDHIATFDTYVTTQRQAVANETLEI PFQVRYEQIGDVVTPGPANTVATITLAYK >gi|333596726|gb|GL892086.1| GENE 1032 1091401 - 1091904 366 167 aa, chain + ## HITS:1 COG:STM0025 KEGG:ns NR:ns ## COG: STM0025 COG3539 # Protein_GI_number: 16763415 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 6 167 7 181 181 73 32.0 1e-13 MKKTIALLALGLMTQAHAEDIQIQMTGNIYANTCIIDTASRNLTVDLGQAVSGSFKDVGD TGEWKDFSLSVSHCPATLALATAFFYGQPDSTHPTKFANTGTAKGLALELADRQDKILIA PQAAFNAAINPSDHTATFPLSARYYATAMPVTAGTFSSVVQVTFTYQ >gi|333596726|gb|GL892086.1| GENE 1033 1091891 - 1094068 2468 725 aa, chain - ## HITS:1 COG:ECs0877 KEGG:ns NR:ns ## COG: ECs0877 COG1199 # Protein_GI_number: 15830131 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 713 1 715 716 1296 88.0 0 MALTAALKAQIGAWYKALQQQIPDFIPRAPQRQMIADVAKTLAGDDGRHLAIEAPTGVGK TLSYLIPGIAIAREEDKTLVVSTANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVC PRNLAALASSEPSQQDLLAFLDDELTPNNKAEQEQCAKLKADLDGYKWDGLRDHTSQAIG DDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAALESESVLPEP KNLLLVLDEGHHLPDVARDALEMSAEITAPWFRLQLDLFCKLVATCMEQFRPKTTPPLAV PERLSEHCEEVYGLISSLNNILNLYLPATQEAEHRFAMGELPEEVMEICQQLAKHLEKLR GLAEMFLNDLSEKTGSHDVVRLHRILLQMNRALGMFEAQSKLWRLASMAQASGAPVTKWA TREVRDGQVHLFFHCVGIRVADQLEKLIWRSVPHVVVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHCEQGKLVIPRMHYEPLIDNEEQHIAEMAAYFREQVESKKYPGMLVL FASGRAMQRFLEYVTDLRLLLLVQGDQPRYRLVETHRKRIDNGERSVLVGLQSFAEGLDL KGDYLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPAASFNLIQQVGRLIRS HGCWGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPDVPEVKKRPAKRSAGRRKSIHAKGR GPTGK >gi|333596726|gb|GL892086.1| GENE 1034 1094166 - 1095548 1829 460 aa, chain - ## HITS:1 COG:STM0820 KEGG:ns NR:ns ## COG: STM0820 COG0513 # Protein_GI_number: 16764183 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 446 1 439 454 712 87.0 0 MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM KLRGGVDVLVATPGRLLDLEHQNAVKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPAR RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKSSGK PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ >gi|333596726|gb|GL892086.1| GENE 1035 1095753 - 1096430 778 225 aa, chain + ## HITS:1 COG:STM0819 KEGG:ns NR:ns ## COG: STM0819 COG1309 # Protein_GI_number: 16764182 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 222 1 222 224 354 81.0 6e-98 MNTTPTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAAQAGQNIAAITYYFGSKEDLYL ACAQWIADFIGTSFRPHVEEASGLLSQPTPDRTAIRQLILNACHNMIRLLTHDDTLNLSK FISREQLSPTAAYQLVHDQVIAPMHTHLTRLIAAYTGRDAGDTETILHTHALLGEVLAFR LGRETILLRTGWTQFDEDKAAQISQVITCHVDLILQGLTQRSQKS >gi|333596726|gb|GL892086.1| GENE 1036 1096427 - 1097422 1340 331 aa, chain + ## HITS:1 COG:STM0818 KEGG:ns NR:ns ## COG: STM0818 COG0845 # Protein_GI_number: 16764181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 504 86.0 1e-143 MKKPVAIILVVVVLLAAGIGGWLWYQSQQDRGLTLYGNVDIRTVNMSFRVGGRLASLSVD EGDTIKAGQTLGMLDKAPFENALMQAKAGVSVAQAQYDLMLAGYRDEEISQAAAAVKQAK AAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLSQYRTGNRAQDI AQAKASLEQAQAQLAQAELDLRDTTLIAPSDGTLMTRAVEPGSMLSAGSTVLTLSLTRPV WVRAYIDEPNLGQMQPGRELLLYTDGRPDTPYHGKVGFVSPTAEFTPKTVETPDLRTDLV YRLRIIVTDADDALRQGMPVTVTLNDGERHE >gi|333596726|gb|GL892086.1| GENE 1037 1097415 - 1099154 228 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 329 546 1 226 245 92 25 7e-17 MNDAVIQLTNLVKRFPGMAKPAVAPLNCTIQKGYVTGLVGPDGAGKTTLMRMLAGLLKPD EGSASVLGLDPIKDDAALHGMLGYMPQKFGLYEDLTVMENLNLYADLRSVTGETRQKTFE RLLAFTSLGPFTDRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM VHELAGDGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPTELTQTMAGRSFLLHSPQE SNRTLLQRVLKLPQVSDGMIQGRSVRVILKKEATADDIRRAQGMPELDMTETTPRFEDAF IDLLGGAGTSESPLGAILHTVEGTPGETVIEAKSLTKKFGDFAATDNVNFAVRRGEIFGL LGPNGAGKSTTFKMMCGLLVPTSGKALVLDMDLKVSSGKARQHLGYMAQKFSLYGNLTVE QNLRFFSGVYGLRGRAQNEKIRRMCDAFGLTDIASHATDALPLGFKQRLALACSLMHEPD ILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIAH GTPDDLKAQAADDAQPDPTMEQAFITLIHDWDKENAHAQ >gi|333596726|gb|GL892086.1| GENE 1038 1099144 - 1100277 1480 377 aa, chain + ## HITS:1 COG:STM0816 KEGG:ns NR:ns ## COG: STM0816 COG0842 # Protein_GI_number: 16764179 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 3 377 2 376 376 662 93.0 0 MRSNALSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL EQQSEEALDFTHAMTGSPYIDATISDNRQELIQKMQAGKIRGLIVIPVDFAANMARPGAD APIQVITDGSEPNTANFVQGYAEGIWQLWQMQRAEDRGEEFKPLIDVQTRYWFNPAAISQ HFIIPGAVTIIMTVIGAILTSLVIAREWERGTMEALLSTEVTRVELLLCKLIPYYFLGML AMLLCMLVSVFILGVPYRGSLVVLFFITSLFLLSTLGMGLLISTITRNQFNAAQVALNAA FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLIINTLFLLAS AVMFIGLTWMKTKRRLD >gi|333596726|gb|GL892086.1| GENE 1039 1100334 - 1101440 1271 368 aa, chain + ## HITS:1 COG:STM0815 KEGG:ns NR:ns ## COG: STM0815 COG0842 # Protein_GI_number: 16764178 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 367 1 367 368 659 94.0 0 MFHRLWTLIRKELQSLLREPQTRAILVLPVLLQVLLFPFAATLEVTNATIAIYNEDNGKH SVELTQRFARAKAFTHVLLLESPQAIQPTIDTQKALLLVRFPADFSRNLDTFQTAPMQLI LDGRNSNSAQIAANYLQQVVKDYQQELMTGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLATWQIFVGKAVPALIVATFQATIVLGV GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISALCSTQQQAFIGVFVFMMPAILLSG YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWGSLWPLLVIAATTGSVAY AMFRRNIA >gi|333596726|gb|GL892086.1| GENE 1040 1101402 - 1101812 555 136 aa, chain - ## HITS:1 COG:no KEGG:ROD_07911 NR:ns ## KEGG: ROD_07911 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 134 1 134 136 194 85.0 1e-48 MKWQQRVRVATGLSCWQIMLHLLVVAVLVMGWMSGTLVRVGLGLCVLYGVTVLSMLFLQR HHDARWREVGDVLEELTTTWYFGAAMIVLWLLSRVLQNNLLLALAGLAILAGPAVVSLLT KEKKLRDVSSKHRIGH >gi|333596726|gb|GL892086.1| GENE 1041 1101946 - 1102707 828 253 aa, chain + ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 444 85.0 1e-125 MSKKTQHFSLKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPMH FENWPDTPHYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEHYENRDVSVGESEKR GLLYCRITPPALDFPIHVGCVHLGLREAHRQAQLQMLADWTNALPEGEPVVVAGDFNDWR QRANHPLKVHAGLEEIFTRARGRPARTFPVRFPLLRLDRIYVKNAHASSPTALALLNWRH LSDHAPLSAEIHL >gi|333596726|gb|GL892086.1| GENE 1042 1102704 - 1103942 1238 412 aa, chain + ## HITS:1 COG:STM0812 KEGG:ns NR:ns ## COG: STM0812 COG1502 # Protein_GI_number: 16764175 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 1 410 1 410 413 710 80.0 0 MKCTWQEGNRITLLENGDNYYPAVFEAISHAQQKVFLETFIWFEDDVGRQLHSALLHAAR RGIKIEVLLDGYGSPDLSDDFVNELTAAGVVFRYYDPGPRLFGMRTNLFRRMHRKIVVVD EKVAFVGGINYSAEHMSDYGPEAKQDYAIRIEGPVVQDIQLFVLENLPGKEAVRRWWRRR HRPEENRKPGEAQALFVWRDNEEHRDDIERHYLKMLANAKREVIIANAYFFPGYRILHAM RNAARRGVTVKLIVQGEPDMPIVKVGARLLYRYLVKSGVQIYEYRRRPLHGKVAVMDDHW ATVGSSNLDPLSLSLNLEANLIIHDRQFNQTLRDNLQGLITRDCVRVDESMVPKRSWWNV GIGVVVFHFLRHFPAMVGWLPAHTPKLALVDPPVQPEMETQDRVEAEDGGKT >gi|333596726|gb|GL892086.1| GENE 1043 1103942 - 1104904 1386 320 aa, chain + ## HITS:1 COG:STM0811 KEGG:ns NR:ns ## COG: STM0811 COG0392 # Protein_GI_number: 16764174 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Salmonella typhimurium LT2 # 1 320 1 320 320 484 88.0 1e-136 MSKSHPRWRLAKKILTWLFFIAVAVLLVVYAQKVDWEEVWKVIRNYNRTVLLGAVGLVIV SYLMYGCYDLLGRAYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPG GTITRIFSLSITTNWLGYILLGGVIFTIGVVQLPAHWYIDEATLRILGIVLLLIIAAYLW ACAFAKRRHMTIKGQKLVLPSWKFAVLQMVVSSANWMAMGAIIWLLIGEDVNYFFVLGVL LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHVSHGTIIAALLAYRMIYYFLPLALATVCY LVLESRAKKLRAKNEKAMAK >gi|333596726|gb|GL892086.1| GENE 1044 1104982 - 1105689 1097 235 aa, chain - ## HITS:1 COG:STM0807 KEGG:ns NR:ns ## COG: STM0807 COG0670 # Protein_GI_number: 16764170 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Salmonella typhimurium LT2 # 1 235 1 234 234 353 94.0 2e-97 MDRFPRSDSIVQQTRSGLQTYMAQVYGWMTVGLLLTAFIAWYAANTPELMMFIFSSKITF FGLIIAQLALVFVLSGLVHKLSAGMATTLFMLYSALTGLTLSSIFIVYTYSSIASTFVVT GGMFGVMSLYGYTTKRDLSGFGSMLFMGLIGIVLASLVNLWLKSEALMWAVTYIGVVIFV GLTAYDTQKLKNIGEQIDVRDSSNLRKYSILGALTLYLDFINLFLMLLRIFGFRR >gi|333596726|gb|GL892086.1| GENE 1045 1105748 - 1106200 548 150 aa, chain - ## HITS:1 COG:moaE KEGG:ns NR:ns ## COG: moaE COG0314 # Protein_GI_number: 16128753 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Escherichia coli K12 # 1 150 1 150 150 253 84.0 1e-67 MTETRILVGPERFSVGTEYSWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTE KSLAGIVEEARGRWPLGRVTVIHRIGEMWPGEEIVFVGVTSAHRGSAFAAGEFIMDYLKT KAPFWKREATPEGERWVESRDSDKQAASRW >gi|333596726|gb|GL892086.1| GENE 1046 1106202 - 1106447 391 81 aa, chain - ## HITS:1 COG:ECs0862 KEGG:ns NR:ns ## COG: ECs0862 COG1977 # Protein_GI_number: 15830116 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 114 74.0 4e-26 MIKVLFFAQVRELVNTDSLTLDGSFENVAALRAHLAAQGDRWALALDESKLLAAVNQTLV ELNHPLAEGDEVAFFPPVTGG >gi|333596726|gb|GL892086.1| GENE 1047 1106440 - 1106925 667 161 aa, chain - ## HITS:1 COG:ECs0861 KEGG:ns NR:ns ## COG: ECs0861 COG0315 # Protein_GI_number: 15830115 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 286 95.0 9e-78 MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMLPETLAMIIDGSHHKGDVFATARI AGIQAAKRTWDLIPLCHPLMLSKVEVNLQAQPEHNRVRIESLCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVESHD >gi|333596726|gb|GL892086.1| GENE 1048 1106929 - 1107441 731 170 aa, chain - ## HITS:1 COG:ECs0860 KEGG:ns NR:ns ## COG: ECs0860 COG0521 # Protein_GI_number: 15830114 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 1 170 1 170 170 319 92.0 2e-87 MSQVSAEFIPTRIAILTVSDRRGEEDDTSGHWLREAAHEAGHQIVDKAIVKENRYAIRAQ VSQWIASDDVQVVLITGGTGFTAGDQAPEALIPLFDREVEGFGEVFRMLSFEEIGTSTLQ SRAVAGVANRTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK >gi|333596726|gb|GL892086.1| GENE 1049 1107466 - 1108455 1075 329 aa, chain - ## HITS:1 COG:STM0802 KEGG:ns NR:ns ## COG: STM0802 COG2896 # Protein_GI_number: 16764165 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 329 1 329 329 618 89.0 1e-177 MASQLTDAFARKFFYLRLSITDVCNFRCTYCLPDGYKPGSVTNNGFLSVDEVRRVTRAFS ELGTEKVRLTGGEPSLRRDFPDIIAAVRENERIRQIAVTTNGYRMARDVANWRDAGLTAI NVSVDSLDARQFHAITGQDKFRQVMDGIDAAFTAGFDKVKVNTVLMRDVNHHQLDTFLAW IKPRRIQLRFIELMETGEGSELFRRHHISGMVLRDELLKRGWIHQIRQRSDGPAQVFCHP DYEGEIGLIMPYEKDFCASCNRLRVSSVGMLHLCLFGDGGVDLRDLLEDDAQQDALEARI SEALTHKKQTHFLHQGNTGITQNLSYIGG >gi|333596726|gb|GL892086.1| GENE 1050 1108803 - 1109711 971 302 aa, chain + ## HITS:1 COG:STM0801 KEGG:ns NR:ns ## COG: STM0801 COG0391 # Protein_GI_number: 16764164 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 473 85.0 1e-133 MRNRTFADLDRVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRAEGGIAW GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN LLKVDALLIPMSEQPVDLMAIDAEDHEVYGEVNIDQLLLPPKELMTYPSVPATREAVEAI GEADLILIGPGSFYTSLMPILLVKELAQALRRTPAPMVYIGNLGRELSPAAASLSLADKL DLMEQYVGKKIIDGVVVGPKVDVSGIGDRVVVQEPLEASDIKYRHDRHLLREALEKAIQA LG >gi|333596726|gb|GL892086.1| GENE 1051 1110270 - 1112285 2752 671 aa, chain - ## HITS:1 COG:ECs0857 KEGG:ns NR:ns ## COG: ECs0857 COG0556 # Protein_GI_number: 15830111 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Escherichia coli O157:H7 # 1 671 1 673 673 1197 94.0 0 MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESVIQR FTIYPKTHYVTPRERIVQAMEEIKIELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDDVVDQVVRPTGLLD PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG QNIAKTKAKGRGKARSVVEEDTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL HQLRDLFIAAS >gi|333596726|gb|GL892086.1| GENE 1052 1113035 - 1113757 548 240 aa, chain + ## HITS:1 COG:YPO1155 KEGG:ns NR:ns ## COG: YPO1155 COG0410 # Protein_GI_number: 16121451 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, ATPase component # Organism: Yersinia pestis # 1 236 1 236 236 219 47.0 5e-57 MLSLRAVNQFYGSQHTLWNVNIDFPQGVCTGIIGLPGMGKSTLMNCITGKVPVESGTIIW HEAGAPPRNLLSPASERLAPPTIGYVPQDRRIFSQLTVDENLHIAMRATGEPDPTSKNEV YALFPELYPLRQIRASTLSPDDQYQLALASALVNRPRVLILDEPMHGAGQGFARRLGQLL VRLNRELGMTVLLAEQQLSFIRRVADRFCMLYRGRNVAQGHVNELDDDLIAHWMARDIRR >gi|333596726|gb|GL892086.1| GENE 1053 1113720 - 1114436 708 238 aa, chain - ## HITS:1 COG:bioD KEGG:ns NR:ns ## COG: bioD COG0132 # Protein_GI_number: 16128746 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli K12 # 6 228 1 223 225 338 77.0 4e-93 MGLLNVTERYFVTGTDTEVGKTVASAALLQAARLLGKTTAGYKPVASGSEMTPEGLRNTD ALTLQRNSSLALAYSAVNPYTFAEPTSPHIVSADEDRPIDFSVLSSGLRALESQADWVLV EGAGGWFTPLSDEQTFADWVQAEQLPVILVVGVKLGCINHAMLTAQAVQQAGLRLAGWIA NDVVAPGKRHAEYLATLKRVLPAPFLGEIPWLADGAEHAQTGRYLDLSAVCPAPSNAQ >gi|333596726|gb|GL892086.1| GENE 1054 1114414 - 1115169 478 251 aa, chain - ## HITS:1 COG:ECs0855 KEGG:ns NR:ns ## COG: ECs0855 COG0500 # Protein_GI_number: 15830109 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 295 63.0 7e-80 MSPVNKQAVAAAFGRAAQSYSRHDELQRLSARGLLSALGDQRFPQVLDAGCGPGGNSRYW RATGSHVTALDLSAQMLDEARQQQSADHYLVADIEAIPLEDAQFDLVWSHLAVQWCASLP QALRELYRVARPGGTLAFTTLLESSLPELNQAWKAVDAKPHANRFLSHEQVIQALTGWRY RSVVQTVTLEFSDALSAMRSLKGIGATHLHAGREKKPLTRGQLQRLELAWPQERGQFPLS YHLFHGIIERD >gi|333596726|gb|GL892086.1| GENE 1055 1115153 - 1116310 1070 385 aa, chain - ## HITS:1 COG:STM0795 KEGG:ns NR:ns ## COG: STM0795 COG0156 # Protein_GI_number: 16764158 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 381 1 381 385 506 72.0 1e-143 MTWQARINTALDERRAAEAFRVRRVVENGAGRFLTREGQRFCNFSSNDYLGLSQHPQIVR AWQQGADRYGVGSGGSGHVSGYTTAHQALEEALADWLGYPRALLFISGFAANQAVIAALM GKDDRIVADRLSHSSLLEAASLSPAQLRRFAHNDAAQLNVMLGKPCSGLQLAVTEGVFSM DGDSAPLAALHETAKQQNAWLLVDDAHGIGVTGEEGRGSAYQQRVRPELLVVTFGKGFGV SGAAVLCSEPVADYLVQFARHLIYSTSMPPAQAVALSASLTVIRSEDGAERRARLAEHIQ RFRRGINELSFRLTDSHSAIQPVIVGENSRALALAQALRERGQWVTAIRPPTVPPGTARL RLTLTAAHEPQDIDTLLEALHVSCQ >gi|333596726|gb|GL892086.1| GENE 1056 1116307 - 1117347 1308 346 aa, chain - ## HITS:1 COG:bioB KEGG:ns NR:ns ## COG: bioB COG0502 # Protein_GI_number: 16128743 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 645 90.0 0 MAHHARWTMSQVTELFNKPFLELMFEAQQVHRQHFDPRHVQVSTLLSIKTGACPEDCKYC PQSARYKTGLESERLMEVEQVLDSARKAKNAGSTRFCMGAAWKNPHDRDMPYLEQMVKGV KEMGLEACMTLGTLNEEQARRLSAAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKV RDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNEDVDA FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDK DVQLFRKLGLNPHQTEVLAGDNEQQQQLEQQIFNADTDQFYNAAAV >gi|333596726|gb|GL892086.1| GENE 1057 1117416 - 1118723 1404 435 aa, chain + ## HITS:1 COG:STM0793 KEGG:ns NR:ns ## COG: STM0793 COG0161 # Protein_GI_number: 16764156 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Salmonella typhimurium LT2 # 7 434 1 428 429 758 83.0 0 MVYKSIMTQDDLAFDKQHIWHPYTSTTRPLPVYPVASAHGCELHLASGERLVDGMSSWWA AIHGYNHPRLNAAMKAQIDQMSHVMFGGITHQPAVDLCRRLVAMTPESLECVFLADSGSV AVEVAMKMALQYWHAKGETRQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLF APAPQSRFDGEWDEMDMVGFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRIRKM CDREGILLIADEIATGFGRTGKLFACEHAGITPDILCLGKALTGGTMTLSATLTTRQVAD TISDGDAGCFMHGPTFMGNPLACAVASESLAILESGEWQTQVAAIEAQLKQQLSAAAEAE YVADVRVLGAIGVIETTHPVNMAALQRFFVDQGVWVRPFGKLIYLMPPYSISADQLHKLT GAVVKAVNISAHFTI >gi|333596726|gb|GL892086.1| GENE 1058 1118772 - 1119248 659 158 aa, chain + ## HITS:1 COG:ECs0851 KEGG:ns NR:ns ## COG: ECs0851 COG1881 # Protein_GI_number: 15830105 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 285 87.0 3e-77 MKIISKDLRDGEKLPERHVFNGMGYQGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG WWHWVVANLPADTRVLPQGSGSDLVALPEGAIQTRTDFGKAGYGGAAPPKGETHRYIFTV HALDVDKIEVDEGASGAMVGFNVHFHSLGSASITAMYS >gi|333596726|gb|GL892086.1| GENE 1059 1119335 - 1120855 2055 506 aa, chain - ## HITS:1 COG:STM0791 KEGG:ns NR:ns ## COG: STM0791 COG2986 # Protein_GI_number: 16764154 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Salmonella typhimurium LT2 # 1 503 1 503 506 802 83.0 0 MNALTLTPGSLTLKQLRQVWRQPVTLALDESAHRAINDSVACVEAIVAEGRTAYGINTGF GLLAQTRIATHDLENLQRSLVLSHAAGVGQPLDDEIVRLMMVLKINSLARGFSGIRLSVI QALMALVNAEVYPWIPAKGSVGASGDLAPLAHMSLLLLGEGQARWQGEWLPAKEALKKAG LAPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAVLGSRRPFDAR IHEVRGQRGQIDAAALYRYVLTDTSDIADSHHNCEKVQDPYSLRCQPQVMGACLTQLRQA AEVLLVEANAVSDNPLVFAQENEVVSGGNFHAEPVAMAADNIALAIAEIGALSERRIALM MDKHMSQLPPFLVRNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSM APAAGRRLWEVASNTRGVLAVEWLAACQGIDLREGLKSSPLLEQARHTLREHVTHYDDDR FFAPDIDMAIQLLEEGRLVGLLPPVL >gi|333596726|gb|GL892086.1| GENE 1060 1120852 - 1122540 1922 562 aa, chain - ## HITS:1 COG:PA5100 KEGG:ns NR:ns ## COG: PA5100 COG2987 # Protein_GI_number: 15600293 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Pseudomonas aeruginosa # 2 558 3 559 559 1009 86.0 0 MSSEKYRKQDVRAARGTTLTAKSWLTEAPLRMLMNNLDPEVAENPHELVVYGGIGRAARN WACYDAIVESLTNLENDETLLVQSGKPVGVFKTHKNAPRVLIANSNLVPHWATWEHFNEL DAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGSLKGRWVLTAGLGGMGGA QPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQADNLDDALARIKKYTAEGKSVSVALC GNAADILPELVARGVRPDLVTDQTSAHDPLHGYLPKGWTWEDYQQKAETDPEGTVLAAKR SMAEHVSAMLAFSKMGIPTFDYGNNIRQMAKEMGVNNAFDFPGFVPAYIRPLFCRGIGPF RWVALSGDPEDIYKTDARVKEIVADDEHLHRWLDMARERINFQGLPARICWVGLEWRQKL GLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS GATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIA IDCAKEQGLNLPMIPATQGKPA >gi|333596726|gb|GL892086.1| GENE 1061 1122668 - 1123402 776 244 aa, chain - ## HITS:1 COG:STM0789 KEGG:ns NR:ns ## COG: STM0789 COG2188 # Protein_GI_number: 16764153 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 11 244 8 241 241 370 79.0 1e-102 MFSRSPQHPSSPPAPFYGKVKKAISEKIAAGVWRPHDRIPSEAELVAQFGFSRMTINRAL RELTDEGLLVRLQGVGTFVAEPKGQSALFEIRSIADEIAARKHQHHCEVLVLEETQASAE QAIELNVKEGTRIFHSVMVHYENDIPVQIEDRCVNAERIPDYLGQDYTQTTPHAYLSLVA PLTEGEHIVEAVRATPQECELLRIKEHDPCLLIRRRTWSSSQIVSHAKLLFPGNRYRLQG HFMS >gi|333596726|gb|GL892086.1| GENE 1062 1123422 - 1124360 733 312 aa, chain - ## HITS:1 COG:STM0788 KEGG:ns NR:ns ## COG: STM0788 COG0010 # Protein_GI_number: 16764152 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Salmonella typhimurium LT2 # 1 311 1 312 313 403 65.0 1e-112 MKLWHPVSPQVWQGRDDSAESSTAKRLFQTTQQREHFAPASSGIALMGFECDEGVKRNQG RPGAAQAPDVLRGALANMASHQGHERLVDMGSVYVEGHALEAAQQALSEAITACQQSGMR TLVFGGGHETAWAHGRGVLDAFPNERIAVINLDAHLDLRKAERATSGTPFRQLAHYCASH SRAFHYACLGVSRAANTQALWKEAERLNVTLVEDLDFRRNALPSLDNVLAQADRVYLTVD LDVLPAAEMPAVSAPAALGIPALDLFPVIERICRSGKLQAADLVEFNPHYDRDGQGAKLA ARLAWQIAHWWA >gi|333596726|gb|GL892086.1| GENE 1063 1124357 - 1125580 992 407 aa, chain - ## HITS:1 COG:STM0787 KEGG:ns NR:ns ## COG: STM0787 COG1228 # Protein_GI_number: 16764151 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Salmonella typhimurium LT2 # 1 407 1 407 407 571 68.0 1e-162 MQQLHPDDVIWRNARLATLATGEPEPYGLKEHHALVVRGQTILAVIPESEIPAGHRQCVD LDGRLVTPGLIDCHTHLVFGGDRAAEWEQRLNGVSYQTISAQGGGINATVTATRNSSPET LLAVAQQRLQRLMNEGVTTVEIKSGYGLNAEAEEKMLLVARQLSLNNLIDISPTLLAAHA VPAEYRQDPDAYLALICEQIMPTLWQKELFEAVDVFCENVGFTPAQTERLFRAATALGIP VKGHVEQLSNLGGAALVSQYKGLSADHIEYLDDAGIQAMAQSGTVAVLLPGAFYFLQERQ RPPVAQLREQGVPMAVATDYNPGTSPFASLHLAMNMACVQFGLTPEEAWAGVTRHAAQAL GRGATHGQLKPGYVADFVVWEANHPVEMVYEPGRNPLYQRVFRGQVA >gi|333596726|gb|GL892086.1| GENE 1064 1125804 - 1127087 1190 427 aa, chain + ## HITS:1 COG:STM0786 KEGG:ns NR:ns ## COG: STM0786 COG4677 # Protein_GI_number: 16764150 # Func_class: G Carbohydrate transport and metabolism # Function: Pectin methylesterase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 689 81.0 0 MTISRISRLALALAFGVTLSACSSTPPDQQPSEQVAPGTASRPILSADEAKNFTRAHYFS AMDPNAAPWTPSSINLPKQPDFVVGPAGAQGVTHTSIQAAVDAAITKHSASRQYIAILPG EYEGTVYVPAAPGSITLYGLGEKAVDVKIGLAIDSEIDTTTWRHLVNPAGKYMPGKPAWY MFDNCQRKRAATIGVMCSAVFWSQNNGLQLQNLTIQNTLGDSVDAGNHQAVALRSDGDKV QINNVNILGRQNTFFVTNSGVQNTLQNNRLTRTLVTNSYVEGDVDMVSGRGAVVFENTDF RVVNSRTQQEGYVFAPATQSNLFYGFLAVNSRFTAAGDGVAQLGRSLDVDSATNGQVVIR DSVINEGFNMAKPWADAAISKRPFSGNTGTVDDKENVQRNLNDANFNRMWEYNNRGLGSK VVAEPKQ >gi|333596726|gb|GL892086.1| GENE 1065 1127191 - 1128186 1056 331 aa, chain - ## HITS:1 COG:STM0785 KEGG:ns NR:ns ## COG: STM0785 COG2706 # Protein_GI_number: 16764149 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 618 88.0 1e-177 MKQTVYTASPESQQIHVWRLNTEGSLTLVQVVDVPGQVQPMVVSPDKRFLYVGVRPEFRV LAYRISPDDGALTYTAEAALPGSPTHISTDHKGNFIFSGSYNAGCVSVTRLEDGIPVETV DVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSDDGHLVAQSPAEVTTVEGAGPRH MVFHPNQQYAYVVNELNSSVDVWELNDPNGQIECVQTLDMMPADFSDTRWAADIHITPDG RHLYACDRTSSLITVFSVSEDGSVLAVEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIA LYEIKGVQGLLEEKGRYAVGQGPMWVVINAH >gi|333596726|gb|GL892086.1| GENE 1066 1128306 - 1129124 909 272 aa, chain + ## HITS:1 COG:STM0784 KEGG:ns NR:ns ## COG: STM0784 COG0561 # Protein_GI_number: 16764148 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 272 1 272 272 470 82.0 1e-132 MTSRVIALDLDGTLLTPQKTLLPSSLEALKRAQEVGYQLLIVTGRHHVAIHPFYQALGLD TPAICCNGTYLYDYQAKKVLASDPLPVTQALQLIDLLDEHAIHGLMYVDNAMVYERPTGH VIRTSNWALSLPEAQRPVFTQVSSLRQAAEDVEAIWKFALTDEDTTKLNTFAKHVEHTLG LECEWSWHDQVDIARKGNSKGKRLTQFVESQGGSMQDVIAFGDNYNDISMLEAAGTGVAM GNADDAVKARADVVIGDNTTDSIAQYIYTHLL >gi|333596726|gb|GL892086.1| GENE 1067 1129125 - 1130183 1204 352 aa, chain - ## HITS:1 COG:STM0783 KEGG:ns NR:ns ## COG: STM0783 COG4148 # Protein_GI_number: 16764147 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 352 1 352 352 611 90.0 1e-175 MLELNFTQTLGNHTLTLNETLPASGITAIFGVSGAGKTSLINAISGLTRPQSGRIVLNNR VLNDAEKKVCLSPEKRRIGYVFQDARLFPHYSVRGNLRYGMAKSMAGQFDKLVALLGIEP LLDRLPSSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLAREINV PMLYVSHSLDEILHLADKVLVLEAGRVKAFGNLEEVWGSSVMHPWLPKEQQSSILKVSVL EHHPHYAMTALALGDQHLWVNKIDTPIQSTLRIRIQASDVSLVLQPPLQTSIRNILRAKV AQCFDDNGQVEVQLEVGSRTLWARISPWARDELGIKPGLWLYAQIKSVSITA >gi|333596726|gb|GL892086.1| GENE 1068 1130183 - 1130875 656 230 aa, chain - ## HITS:1 COG:STM0782 KEGG:ns NR:ns ## COG: STM0782 COG4149 # Protein_GI_number: 16764146 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 346 93.0 2e-95 MILTEPEWQAVLLSLKVSSLAVALSLPFGVFFAWLLVRVKFPGKALLDSVLHLPLVLPPV VVGYLLLISMGRRGFIGEWLYDWFGLTFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDI RLEQAARTLGAGRWRVFLTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT IPSAMYTLIQTPGGEGAAARLCIISIVLALVSLLVSEWLARLSRERMGKP >gi|333596726|gb|GL892086.1| GENE 1069 1130872 - 1131648 946 258 aa, chain - ## HITS:1 COG:STM0781 KEGG:ns NR:ns ## COG: STM0781 COG0725 # Protein_GI_number: 16764145 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 256 1 256 257 411 85.0 1e-115 MARSWVRLFAGATLTLSLTGHALADEGKITVFAAASLTNAMQDIAAVYKKEKNVEVVSSF ASSSTLARQIEAGAPADLFISADQKWMDYAVEKKSVETATRETLLGNSLVVVAPVNGKQG DIAINKQTDWTRLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWETLSPKLAPAEDVRGAL ALVERNEAPLGIVYGSDAVASKGVKVVGTFPEDSHKKVEYPVAIVDGHKNATVTAFVDYL KGPEASAIFKRYGFTTHE >gi|333596726|gb|GL892086.1| GENE 1070 1131827 - 1131979 89 50 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1253 NR:ns ## KEGG: Ent638_1253 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 50 1 49 49 75 92.0 5e-13 MLELLKSLVFAVIMVPVVMAIILGAIYGLGEVFNVFSNIGHRRDQPKKQQ >gi|333596726|gb|GL892086.1| GENE 1071 1132107 - 1132895 914 262 aa, chain + ## HITS:1 COG:ECs0789 KEGG:ns NR:ns ## COG: ECs0789 COG2005 # Protein_GI_number: 15830043 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 374 81.0 1e-104 MQAEILLTLRLQQKLFADPRRIALLKQIEQTGSISQGAKNAGISYKSAWDAINDMNTLSE HTLVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDNLPLDSLLGAISR FSLQTSARNQWFGTVTGRDHSQVQEHIEILLADGTTRLKAAITAQSGQRLGLNEGKDVLV LLKAPWISITLNPEQAAEADNQLRGRISHVERGAEQCEVLMTLPDGQPLCATVPVNNATE LEEGAVVTAYFNADRVIIATLC >gi|333596726|gb|GL892086.1| GENE 1072 1132963 - 1134435 1547 490 aa, chain + ## HITS:1 COG:modF KEGG:ns NR:ns ## COG: modF COG1119 # Protein_GI_number: 16128728 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Escherichia coli K12 # 1 489 1 489 490 838 84.0 0 MSSLHISQGTFRLSDTRTLSLPELTLRAGESWAFVGTNGSGKSALARALAGELTQLKGER RCTFTRMTRLSFEQLQKLVSAEWQRNNTDLLSPGEEDTGRTTAEIIQDEIKDPARCQQLA EQFGITALLNRRFKYLSTGETRKTLLCQALMSEPELLILDEPFDGLDVQSRAQLAALLAT LNQQGYTLVLVLNRFDEIPDFVHYAGVLADCSLTETGEKAVLLRQALIAQLAHSEKLDGI ALPEPDAPSARHGLDPAQPRIVLRDGVVAYDDRPILHHLSWTVNPGEHWQIVGPNGAGKS TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVIL SGFFDSIGIYQAVSDKQHKLAQQWLDILGMDNRIADAPFHSLSWGQQRLALIVRALVKHP TLLILDEPLQGLDPLNRQLIRRFVDILISEGETQLLFVSHHAEDAPSCITHRLEFVPDGE HYRYLLSKID >gi|333596726|gb|GL892086.1| GENE 1073 1134637 - 1135653 1228 338 aa, chain + ## HITS:1 COG:ECs0787 KEGG:ns NR:ns ## COG: ECs0787 COG1087 # Protein_GI_number: 15830041 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 681 95.0 0 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIR NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNP VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAIFGNDYPTEDGTGVRDYIHVMDLA DGHVAAMQQLADKPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVNYHFAPRRDGDLPAYW ADATKADKELNWRVTRTLDEMAQDTWHWQSRHPQGYPD >gi|333596726|gb|GL892086.1| GENE 1074 1135663 - 1136709 1111 348 aa, chain + ## HITS:1 COG:galT KEGG:ns NR:ns ## COG: galT COG1085 # Protein_GI_number: 16128726 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 662 92.0 0 MTKFNPVDHPHRRFNPLSGQWILVSPHRAKRPWQGAQETPAKQTLPQHDPDCFLCPGNTR VTGDKNPDYTGTFVFTNDFAALMTDTPDAPESHDPLMRCESARGTSRVICFSPDHSKTLP ELSVEALKEVVTTWQTQTAELGQTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE REDRLQKAYFTENGSPMLVDYTQRELADGSRTVVETAHWLAVVPYWAAWPFETLLLPKAH VQRITDLNDAQRDDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDVHYRESGV >gi|333596726|gb|GL892086.1| GENE 1075 1136713 - 1137861 1291 382 aa, chain + ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 711 89.0 0 MSLKDKTQSLFAEKFGYPATHVIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRD DRHVRVIAADYDNEIDEFSLDAPIVTHDSQQWSNYVRGVVKHLQKRNKNFGGADLVISGN VPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISAL GKKEHALLIDCRSLGTKAVPLPKGAAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQP ALRDVSLDEFNKVAHELDPVVTKRVRHILTENARTVEAASALAKGDLKRMGELMAESHAS MRDDFEITVPQIDTLVEIVKATIGDKGGVRMTGGGFGGCVVALVPEELVPAIQDAVAKQY EAKTGIKETFYVCKASQGAGQC >gi|333596726|gb|GL892086.1| GENE 1076 1137855 - 1138898 322 347 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 11 344 16 343 345 128 27 9e-28 MLNETPTLAPDGLPYRLLTLRNSAGMVVTLMDWGATLLSARVPMPDGSVRETLLGCASPE QYIEQTAFLGASIGRYANRIARSRFTLDGVEYSLLSSQGENQLHGGPEGFDKRRWKIVQQ NDGEVWFSLDSLDGDQGFPGNLTATARFTLTEDNRIAIEYRATVDKPCPVNLTNHAYFNL DGNQTDVRSHKLQILADAYLPVDEMGIPYQGLKPVSGNSFDFRQPKTIAQDFLSDDDQRK VKGYDHAFLLQAKGDLSQPAAQVWSADEKLQMTVYTTAPALQFYSGNFLEGTTAREHDAY SAWQGLALESEFLPDSPNHPEWPQPDCVLRPGEGYVSVTEYHFIPRA >gi|333596726|gb|GL892086.1| GENE 1077 1139172 - 1139924 1232 250 aa, chain + ## HITS:1 COG:STM0772 KEGG:ns NR:ns ## COG: STM0772 COG0588 # Protein_GI_number: 16764136 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Salmonella typhimurium LT2 # 1 250 1 250 250 459 95.0 1e-129 MANTKLVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFTFDFAYTSVL KRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFA VTPPELSKDDERYPGHDPRYAKLTEAELPQTESLALTIDRVVPYWNETILPRLKSGERVI IAAHGNSLRALVKYLDNMGEDEILELNIPTGVPLVYEFDENFKPVKHYYLGNADEIAAKA AAVANQGKAK >gi|333596726|gb|GL892086.1| GENE 1078 1139986 - 1141038 1183 350 aa, chain - ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 679 93.0 0 MNYQNDDLRIKEINELLPPVALLEKFPATENAANTVSHARKAIHKILKGSDDRLLVVIGP CSIHDPAAAKEYASRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQIN DGLRIARKLLLEINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPN YSAKHVAEVKAGLEKAGLPPQVMIDFSHANSSKQFKKQMEVGADVCQQIASGERAVIGVM IESHLVEGNQNLEGSEPLVYGKSVTDACIGWDDTDAILRQLADAVKARRG >gi|333596726|gb|GL892086.1| GENE 1079 1141340 - 1141702 348 120 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1244 NR:ns ## KEGG: Ent638_1244 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 120 1 133 133 95 70.0 5e-19 MMKMTKLTTLFLTATLTLASGSVLAADTGSSGSNGDANAAAEAGQVAPDAKQNIAPNNVD NNNINTGNTNTGGTNTGTMNHDGMSTDEVHKNSMCKDGKCPDPNDKVGSDADTKTDGTTQ >gi|333596726|gb|GL892086.1| GENE 1080 1141802 - 1142740 793 312 aa, chain + ## HITS:1 COG:STM0758 KEGG:ns NR:ns ## COG: STM0758 COG1230 # Protein_GI_number: 16764123 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Salmonella typhimurium LT2 # 1 310 1 312 312 443 80.0 1e-124 MAHSHSHPPAAGDENAKRLLLAFGVTATFMIIEVIGGLISGSLALLADAGHMLTDAAALL FALLAVQFARRPPNARHTFGWLRLTTLAAFVNAIALVVITILIVWEAFQRFRHPQPIAGT TMMVIAVAGLVANILAFWILHRGSSEKNLNVRAAALHVLGDLLGSVGAIVAALIIMGTGW TPIDPILSVLVSCLVLRSAWRLLKESVNELLEGAPTSLDIGELKRNLCRSIPEVRNVHHV HVWLVGEKPLMTLHVQVIPPHDHDALLERIQHFLEHHYEIAHATIQMEYQPCNGPDCHLN EAQSGHSHAHHH >gi|333596726|gb|GL892086.1| GENE 1081 1142737 - 1143456 921 239 aa, chain - ## HITS:1 COG:ECs0779 KEGG:ns NR:ns ## COG: ECs0779 COG3201 # Protein_GI_number: 15830033 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Escherichia coli O157:H7 # 1 238 1 238 239 365 89.0 1e-101 MDFFSTQNILVHIPIGAGGYDLSWIEAVGTLAGLLCIWLASLEKISNYAFGLINVTLFAI IFFQIQLYASLLLQVFFFAANIYGWYAWSRQNSQQEAELQIRWLPLPKAIAWFAACVVAI GFMTVFIDPVFAFLTRVAVAVMSGLGLNVTMPELQPDAFPFWDSCMMVLSIAAMILMTRK YVENWLLWVVINVISVVIFARQGVYAMSLEYMLLTFIALNGSRMWINSARERGSRALSR >gi|333596726|gb|GL892086.1| GENE 1082 1143479 - 1144513 1039 344 aa, chain - ## HITS:1 COG:STM0756 KEGG:ns NR:ns ## COG: STM0756 COG0379 # Protein_GI_number: 16764121 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Salmonella typhimurium LT2 # 1 343 4 346 347 652 93.0 0 MFNPETAIYPFPPKPAPLSRDEKQFYREKIKRLLKERDAVMVAHYYTDPEIQQLAEETGG CISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTVLMPTLNAECSLDLGCPIDE FTAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRHLGN YVQKQTGADVLCWQGACIVHDEFKTQALTRMKGLYPDAAILVHPESPQSIVDMADAVGST SQLIHAAKTLPHKQLIVATDRGIFYKMQQAVPEKVLLEAPTAGEGATCRSCAHCPWMAMN GLKAIAEGLENGGAAHEIHVDAALREGALIPLNRMLDFAATLRT >gi|333596726|gb|GL892086.1| GENE 1083 1145496 - 1146284 725 262 aa, chain - ## HITS:1 COG:ECs0777 KEGG:ns NR:ns ## COG: ECs0777 COG1729 # Protein_GI_number: 15830031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 261 1 263 263 348 88.0 8e-96 MSSNFRHHLMSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ QQLSDNQNDIDSLRGQIQESQYQLNQVVERQKQILLQMDSLNSGGAAAQPAAGDQSGAAA PAPAADASASSGAPVQSGDANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNA NYWLGQLNYNKGKKDDAAFYFASVVKNYPKSPKAPDAMYKVGVIMQDKGDTAKAKAVYQQ VVAKFPGTDGAKQAQKRLSSMG >gi|333596726|gb|GL892086.1| GENE 1084 1146294 - 1146815 527 173 aa, chain - ## HITS:1 COG:STM0749 KEGG:ns NR:ns ## COG: STM0749 COG2885 # Protein_GI_number: 16764119 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Salmonella typhimurium LT2 # 1 173 1 174 174 276 95.0 1e-74 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGNGNMSSEEQARL QMQQLQQNNIVYCDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY >gi|333596726|gb|GL892086.1| GENE 1085 1146850 - 1148142 1003 430 aa, chain - ## HITS:1 COG:STM0748 KEGG:ns NR:ns ## COG: STM0748 COG0823 # Protein_GI_number: 16764118 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Salmonella typhimurium LT2 # 1 430 1 430 430 791 95.0 0 MKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVAA DLRNSGKFNPLDRSRLPQQPGTAQEVQPAAWSALGIDAVVIGQVTPAPDGGYNVAYQLVD TGGAPGTVLAQNTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY ELRVSDYDGYNQFTVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLSNGAVRQVA SFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQ NLAFTSDQAGRPQVYKVNINGGAAQRITWEGSQNQDADVSADGKTMVMVSTAGGQQHIAK QDLVTGGVQILSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ VKSPAWSPYL >gi|333596726|gb|GL892086.1| GENE 1086 1148272 - 1149366 960 364 aa, chain - ## HITS:1 COG:STM0747 KEGG:ns NR:ns ## COG: STM0747 COG3064 # Protein_GI_number: 16764117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Salmonella typhimurium LT2 # 1 364 54 407 407 173 68.0 4e-43 MVDPGAVVQNYNRQQQQQASAKRAEEQREKQAQQQAEELREKQAAEQERLKQLEKERLQA QEAAKEQAEQQKQAEAAAKKAQEQQKQAEEAAAKAAADAKAQADAQAKLAAEAAKKAAAD AQKKAEAEAAKKAAADAQKKAEAEAAKKAAADAQKKAEAEAAKKAAQEAEKKAAADAAKK AAAAEKAAAEKAAAAEKAAADKKAAAAKAAADKKAAAEKAAAKKAAAEKAAAAAGVDDLL GDLSSGKNAPKTGGGAKGSGQPSKDSGTSGANGGATGADISAYAKQIQVAIQSRLFDAGL YQGKQCVLHINLAPDGRLKSVTSEGGDPALCQAALAAARSANIPKPPNEAVYEKIKDAKL DFKL >gi|333596726|gb|GL892086.1| GENE 1087 1149551 - 1149979 361 142 aa, chain - ## HITS:1 COG:STM0746 KEGG:ns NR:ns ## COG: STM0746 COG0848 # Protein_GI_number: 16764116 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Salmonella typhimurium LT2 # 1 142 1 142 142 209 90.0 1e-54 MARSRGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSTND DPPVIIEVSGVGQYSVVVEKDRMDQLPPEQVIAEAQRRLESNPKTVFLIGGAKGVPYDEI IKALNLLHSAGVKSVGLMTQPI >gi|333596726|gb|GL892086.1| GENE 1088 1149983 - 1150666 816 227 aa, chain - ## HITS:1 COG:ECs0772 KEGG:ns NR:ns ## COG: ECs0772 COG0811 # Protein_GI_number: 15830026 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 227 4 230 230 402 96.0 1e-112 MNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELS RLYQESQGRRENLTGSEQIFYSGFKEFARLHRANNHAPEAVVEGASRAMRISMNRELENL ETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLF AAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESNKG >gi|333596726|gb|GL892086.1| GENE 1089 1150672 - 1150962 87 96 aa, chain - ## HITS:1 COG:STM0744 KEGG:ns NR:ns ## COG: STM0744 COG0824 # Protein_GI_number: 16764114 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Salmonella typhimurium LT2 # 1 96 39 134 134 170 93.0 8e-43 MLRHHHFSQQVLLAERVAFVVRKMTLEYFAPARLDDMLEVQTEITSMRGTSLVFTQRIVN AENTVLNSAEVLIVCVDPTIMKPRALPKSIVAEFKQ >gi|333596726|gb|GL892086.1| GENE 1090 1151224 - 1151514 271 96 aa, chain - ## HITS:1 COG:ECs0770 KEGG:ns NR:ns ## COG: ECs0770 COG3790 # Protein_GI_number: 15830024 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 3 96 4 97 97 150 87.0 4e-37 MNIIATLYAVMDKRPLRALSLVMALLLAGCIFWDPSRFAAKTSELEIWHGFLMMWAVCAG VIHGVGFRPKALHWQGIFCPLIADLVLLAGLIFFFF >gi|333596726|gb|GL892086.1| GENE 1091 1151514 - 1151627 134 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWYFAWILGTLLACAFGVITALALEHVEASKAGEEKH >gi|333596726|gb|GL892086.1| GENE 1092 1151642 - 1152781 1505 379 aa, chain - ## HITS:1 COG:STM0741 KEGG:ns NR:ns ## COG: STM0741 COG1294 # Protein_GI_number: 16764111 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 660 91.0 0 MIDYEVLRFVWWLLIGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDTRWRNMWD WGIFIGSFVPPLVIGVAFGNLLQGVPFHVDEYMRLFYTGNFFQLLNPFGLLAGVVSVAMI ITQGATYLQMRTVGELHLRSRATAQVAALVTLVCFALAGVWVVYGIDGYVVTSAINHTAP SNPLTKEVARQAGAWLVNFNNTPALWAIPALGVLLPLLTVLTSRLEKGALAFVFSSLTLA CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSHMTLNLMTYVACVFVPIVLAYTIWCYW KMFGRITKEHIESNTHSMY >gi|333596726|gb|GL892086.1| GENE 1093 1152797 - 1154365 2111 522 aa, chain - ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 522 2 523 523 960 93.0 0 MLDVVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHMAVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFAELVLNPVA QVKFVHTVASGYVCGAMFVLGISSYYMLRGRDFAFAKRSFAIAASFGMAAILSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGVPDQEAQENRFAIQIPYALGIIATRSV DKQVTGLKDLMVQHEERIRNGMKAYSLLEQLRAGSTDQAVRDQFNDVKKDLGYGLLLKRY TPNVSDATEAQIQMATKDSIPRVAPLYFAFRIMVGCGIIMLLIIAASFWSVIRNRIGEKK WLLRTALYGIPLPWIAIESGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMLLICG LYTLFLVAELFLMFKFARLGPSSLKTGRYHYEQSAATTQPAR >gi|333596726|gb|GL892086.1| GENE 1094 1155036 - 1157681 2311 881 aa, chain - ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 1 876 1 876 877 1495 79.0 0 MKAVSRVHITPHMHWDREWYFTTEASRILLVNNMEEILTRLEQDAEYKYYVLDGQTAVLE DYFAVKPENRPRVKALVEAGKLIIGPWYTQTDTTLVSGESIIRNLMYGIRDCLAFGEPMK IGYLPDSFGMSSQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSQDGSEVTAQVLPL GYAIGKYLPEDEAGLRKRLDAWLEVLEKASVTKEILLPNGHDQMPLQQNIFTVMDKLREI YPQRQFVMSRFEEVFDHIDAHRDELATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIEN KIVNVLEPLATLAWTLGFEYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREVMSRFELA EDMADNLTSFYMRKIVDNMPQSDEDKLVMFNLMPWPREEVINTTLRLRASQFRLLDDKGN EIPYYLRSAREIDPGLIDRQIVHYGNYDPFMEFDIQVKQILPSMGYRTLYIEPHVAGKVL DAAKSPEALLENAFWEIALNDDGTLRLRDKESGLIYDRVLEIEESSDDGDEYDYSPSREE WRLTSAQGEHEVEVIHDAWQSRAIIRHHMAVPADLAERSARQQTGTLEAELTVTLSHNSR RIDVEARLGNHADDHRVRVLIPTPFTTDAVLADTQFGSLTRPVQDDAMANWQEEGWKEAP LPVWNLLNYAVLQERRNGLALFTEGLREFEVTGERQKTFALTLLRGVGLLGKEDLLLRPG RPSGIKMPVPDSQMRGQLTCRFSLFSFTGTAVSAGVAQQAKSWLTPVHCYNKIPWDAMKL NRASFTTPCSYSLLTLAPNGCMLSALKKAEDRDEMILRLYNPSETRTCDVALSVNRAVLA CCETDMNEAVNAQGEDGSGITGPFRPGQSRTFSIKIERSSS >gi|333596726|gb|GL892086.1| GENE 1095 1157705 - 1159624 2183 639 aa, chain - ## HITS:1 COG:hrsA_3 KEGG:ns NR:ns ## COG: hrsA_3 COG1299 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 281 637 2 358 360 577 89.0 1e-164 MINLTALTHPDALCLNAHFSSREDAIHALAERLVSLGKITDSQSFLDEVFARESLGPTAL GEGLAVPHGKSSAVKEAAFAVATLREPLLWEGVDGPEPVELIFLLAIPPAEAGSTHMQLL TTLTTRLADDELRARVQAASTPQALLAALDTNALTQASTLSQDAPTVVCVTACPAGIAHT YMAAEYLEKAGRKLGVRVVVEKQGANGIEGRITARQLQEAKACIFAAEVAIKERERFQGI PAITVPVAEPLRHAEALIERALALPPVSDARPAHVDPDAKKCVKTELKQALLSGISFAVP LIVAGGTVLAVSVLLAQILGLQHLFDQENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLA DKPALTPGFAAGLAANMIGSGFLGAIVGGLIAGYLMRWVKNHVRLSSRFNGFLTFYLYPV IGVLGAGSLMLFVIGEPVAWLNNTLTAWLNGLSGANALLLGAILGFMCSFDLGGPVNKAS YAFCLGAMANGVYGPYAIFASVKMVSAFTVTAATMLAPNLFKQFEIETGKSTWLLGLAGI TEGAIPMAIEDPLRVIGSFVLGSMATGAIVGAMGIGLSTPGAGIFSLFLLHDAGLGGAMA AAGWFGAALVGTAISTLILLLWRRHAVKRGTYVTEDITS >gi|333596726|gb|GL892086.1| GENE 1096 1159803 - 1160519 805 238 aa, chain + ## HITS:1 COG:farR KEGG:ns NR:ns ## COG: farR COG2188 # Protein_GI_number: 16128705 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 236 1 236 240 328 71.0 5e-90 MTRKPMYRQIADALRQHIQEGELKPGDALPTESTLQEAYGVSRVTVRQALKLLTEQNIIE SIQGSGSYVKEERVNYDIYQLTSFYEKLADRNVETHSDVQIFEVVKADAPLAQTLLLATG EKVWHVKRVRFIKQKPVTLEETWMPLALFPDLTWEVMENSKYHYIEQIKKMVIDRSEQEI VPVMPDEDVIAALGIDPAKPILEKISRGFLKDGRVFEYSRNSFKSEDYRFTLIARRHH >gi|333596726|gb|GL892086.1| GENE 1097 1160850 - 1162805 1974 651 aa, chain + ## HITS:1 COG:yjcS KEGG:ns NR:ns ## COG: yjcS COG2015 # Protein_GI_number: 16131909 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Escherichia coli K12 # 29 651 41 664 665 608 47.0 1e-174 MKLKKIAFLMLTLAVSGQVCATRVAPAASAYTRENNAAMYQKLNFNDKRDIDDAKRGFIA TIDPLIIKKDNGKPVVNLENWSFLKGEAPDTVNPSLWRHAQLNNINGLFKVTDRVYQIRG IDISNMTIIEGDSGLIIIDPLVIPESARAGLELYYQHRPKKPVVAVIYSHSHLDHFGGVK GMVSETDVKSGKVKIYAPEGFVEEAASENFLAGNAMSRRALYMYAMMVKPSAVGQVDDGI GKTIATSKNTLITPTNIISQPEQRENIDGVEVNFMLAPGAEAPSEMMMWFPQFKVFDGSE LFNATMHNLYTLRGAKARSAVNWWKALDKALIKYGDQAEIALSQHLWPVWDNARVKDYIA SQRDMYKYINDQSLNLINKGYNMDEVAEKLTLPDSIGKRWSNRGYYGSLSHNAKAMYMFY MGWYDSNPANLNPLPEKEVAPRYVRLMGGEEKVYQQAKQAADSGNYRWAAQLLNHLIFAN PDNKQAKDLQADIFTQLGYQSENAIWRNEYLSGAKELRDGVPVLPVASTLDSDLTASIPP ETLLDYMGVTLNGPKADGKTLRFNWTVPEGDTYGVELNNSVIIYRKGQPFTDAAFSLKAN VVDVARLISHSAPVDKILNDGTVSMKGNPQKLDELLALLDVFPQMFNIVTP >gi|333596726|gb|GL892086.1| GENE 1098 1162870 - 1163793 995 307 aa, chain + ## HITS:1 COG:no KEGG:Rmet_1758 NR:ns ## KEGG: Rmet_1758 # Name: not_defined # Def: hypothetical protein # Organism: R.metallidurans # Pathway: not_defined # 24 307 22 303 306 154 31.0 3e-36 MRSSERNLLVAIIVLIVGMLLVLLPVYVRADNARDWQNLPKDKNLVFGYYNNIHTNTSID SALPVDGASVDADLYLLRYARSFDIDGRISAIQIIQPYASVTASLDNARYFTGSLSHENL GDTQVIFAHNLFGAPALSEEEFRRWQPGMFLSAAMWLTLPTGDYDSSNTINIGANRWSFK PELAFGVPIGASWLELNSWVSFYTDNKDYQQNSRLEQRPLYTLEGHWSYTLSPALWLSLD GSWAKGGETRVDGQLQDDEQENVLLGGSVGFMLTPHFGGMVAYTDTAKHRDASPDVTTWT FRLQYLW >gi|333596726|gb|GL892086.1| GENE 1099 1163807 - 1164580 803 257 aa, chain + ## HITS:1 COG:no KEGG:PFL_2855 NR:ns ## KEGG: PFL_2855 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens # Pathway: not_defined # 7 257 13 261 263 311 56.0 1e-83 MRCITVILALLGALPGLCLAEETDAVEKATNPLHLSTSIALQDYYTPQLYGSDQHTNDTL LRATVPIAANDWVPVPQILRMTVPLATRPQPGSGYSTGLGDINLFDIFLLKQEGVKIGVG PLITASSASEDELGSGKWQAGLSAIAIKSSPRWMAGTLVQWQKSFAGDGERDDVETGTFQ PIVVYKLPKGWYLRTSGIWTWNMKSDDYSIPLGFGGGRAWPIGDKVMSAFVEPQWTVAHK GDYLPEFTLFAGVSVTL >gi|333596726|gb|GL892086.1| GENE 1100 1164665 - 1165534 1089 289 aa, chain - ## HITS:1 COG:STM0739 KEGG:ns NR:ns ## COG: STM0739 COG0074 # Protein_GI_number: 16764109 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 289 1 289 289 507 99.0 1e-144 MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTQMVGGVTPGKGGTTHLGLPVFNTVREA VEATGATATVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI GPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG DPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKDHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKSIIK >gi|333596726|gb|GL892086.1| GENE 1101 1165534 - 1166700 1566 388 aa, chain - ## HITS:1 COG:STM0738 KEGG:ns NR:ns ## COG: STM0738 COG0045 # Protein_GI_number: 16764108 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 716 98.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKAGGV KVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRR VVFMASTEGGVEIEKVAEETPHLIHKVAIDPLAGPMPYQGRELAFKLGLEGKLVQQFTKI FMGLATIFLERDLALIEINPLVITTQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDP REAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDDNVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKSLTDAAQQVVAAVEGK >gi|333596726|gb|GL892086.1| GENE 1102 1166786 - 1168012 1721 408 aa, chain - ## HITS:1 COG:STM0737 KEGG:ns NR:ns ## COG: STM0737 COG0508 # Protein_GI_number: 16764107 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 408 1 402 402 711 94.0 0 MSSVDILVPDLPESVADATVATWHKKPGDAVTRDEVLVEIETDKVVLEVPASADGILDAV LEDEGTTVTSRQILGRLREGNSAGKESSAKSEEKASTPAQRQQASLEEQSNDALSPAIRR LLAEHSLDPAAIKGTGVGGRLTREDIDKHLAKAPSEAKAEAKAPAAAPAAQPALGARSEK RVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGDAFEKRHGIRLGFMSF YVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEK KIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMA VDGKVEILPMMYLALSYDHRLIDGRESVGFLVAIKELLEDPTRLLLDV >gi|333596726|gb|GL892086.1| GENE 1103 1168027 - 1170834 3353 935 aa, chain - ## HITS:1 COG:ECs0751 KEGG:ns NR:ns ## COG: ECs0751 COG0567 # Protein_GI_number: 15830005 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 935 1 933 933 1847 93.0 0 MQNGAMKAWLDSSYLSGSNQSWIEQLYEDFLTDPDSVDANWRSMFQQLPGTGVKPDQFHS KTRDYFRRLAKDASRYSSAISDPDTNAKQVKVLQLINAYRFRGHQHANLDPLGLWQQERV ADLDPAYHDLTEADFQESFNVGSFAIGKDTMKLGDLIDALKQTYCGSIGAEYMHITSTEE KRWIQQRIESVAGHANFSADEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM LKELIRHAGKSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYH MGFSSDIETEGGQVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDA AVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAP IFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLFCYRRHGHNEADEPSATQPLMYQKIK KHPTPRKIYADKLESEKVATLEDATEMVNLYRDALDAGECVVKELRPMNMHSFTWSPYLN HEWDESYPNKVEMKRLQELAKRISTVPEAIEMQSRVAKIYGDRQAMAAGEKLFDWGGAET LAYATLVDEGIPVRLSGEDAGRGTFFHRHAVVHNQSNGSTYTPLQHVHNGQGQFKVWDSV LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP KSLLRHPLAVSSLEELANGTFLPAIGEIDELDPQAVKRVVMCSGKVYYDLLEQRRKNDQK DVAIVRIEQLYPFPHQAMQEVLKQYAHVHDFVWCQEEPLNQGAWYCSQHHFREVIPFGSA LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVD >gi|333596726|gb|GL892086.1| GENE 1104 1171073 - 1171789 603 238 aa, chain - ## HITS:1 COG:ECs0749 KEGG:ns NR:ns ## COG: ECs0749 COG0479 # Protein_GI_number: 15830003 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 479 94.0 1e-135 MKLEFSVYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPTLSFRRSCREGVC GSDGVNMNGKNGLACITPISALQRPGQKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY LLNNGQNPPAREHLQSPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR FLIDSRDTETETRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA >gi|333596726|gb|GL892086.1| GENE 1105 1171805 - 1173571 2273 588 aa, chain - ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1121 96.0 0 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNS HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFG GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAVVGC TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI PTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQ ESIAEQGALRDATDDEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAM AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAFATAMSANFRTESRGAH SRFDFPDRDDENWLCHSLYLPESETMTRRSVNMEPKLRPAFPPKIRTY >gi|333596726|gb|GL892086.1| GENE 1106 1173571 - 1173918 522 115 aa, chain - ## HITS:1 COG:STM0733 KEGG:ns NR:ns ## COG: STM0733 COG2142 # Protein_GI_number: 16764103 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Salmonella typhimurium LT2 # 1 115 1 115 115 141 91.0 2e-34 MVSNASALGRNGVHDFILVRATAIVLTLYIIYMIGFFATSGTLTWEIWSGFFGSAFTKVF TLLALFSILIHAWIGMWQVLTDYVKPLAIRLPLQLIIVVALLVYVIYGFVVVWGV >gi|333596726|gb|GL892086.1| GENE 1107 1173912 - 1174316 291 134 aa, chain - ## HITS:1 COG:ECs0746 KEGG:ns NR:ns ## COG: ECs0746 COG2009 # Protein_GI_number: 15830000 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Escherichia coli O157:H7 # 6 134 1 129 129 208 93.0 2e-54 MWALFMIRNVKKQRPVNLDLKTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSP EGFLQASAIMNSFFVKFIMWGILTALAYHVVGGVRHMLMDFGYLEETFEAGKRTANISFV ITVVLSLLAGVLVW >gi|333596726|gb|GL892086.1| GENE 1108 1174955 - 1176238 1691 427 aa, chain + ## HITS:1 COG:gltA KEGG:ns NR:ns ## COG: gltA COG0372 # Protein_GI_number: 16128695 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli K12 # 1 427 1 427 427 876 96.0 0 MADTKAKLTLNGDDAIELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITYI DGDEGILLHRGFPIDQLATESNYLEVCYILLNGEKPTQAQYDEFKTTVTRHTMIHEQITR LFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHRDIAAFRLLSKMPTMAAMCYKYS IGQPFVYPRNDLSYAGNFLRMMFSTPCEEYEVNPVLERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVEHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELEHIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWNEMHSEGMKIARPRQLYTGYEQRD FKSDIKR >gi|333596726|gb|GL892086.1| GENE 1109 1176336 - 1177127 695 263 aa, chain - ## HITS:1 COG:nei KEGG:ns NR:ns ## COG: nei COG0266 # Protein_GI_number: 16128689 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli K12 # 1 262 1 262 263 448 81.0 1e-126 MPEGPEIRRAADSLEVAIKGKPLTHVWFAFPQLKPFESQLVGQTVTHIETRGKALLTHFS HTLTLYSHNQLYGVWRVVEADEQPQTTRVLRVRLQTAEKAILLYSASDIEMLTPEQLLTH PFLQRVGPDVLDMRLTASEVKARLLSPTFRNRQFSGLLLDQAFLAGLGNYLRVEILWEVG LAPQHKASQLSDEQLEALSHALLAIPRLSYNTRGVVDENKHHGALFRFKVFHRAGKKCER CGGVIEKATISSRPFYWCPGCQM >gi|333596726|gb|GL892086.1| GENE 1110 1177146 - 1177886 643 246 aa, chain - ## HITS:1 COG:ECs0738 KEGG:ns NR:ns ## COG: ECs0738 COG1540 # Protein_GI_number: 15829992 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Escherichia coli O157:H7 # 2 245 1 244 244 351 75.0 8e-97 MVKIDLNADLGEGSSADEALMTLVTSVNIACGFHAGDAQTMLESVRNAMNNGVAIGAHPS FPDRENFGRTAMDLPPETVYAQTLYQIGALEAIVRAENGALRHVKPHGMLYNQAAKDPAL ADAIARAVRDCNPQLILVGLAGSELIRAGERLGLTTRQEVFADRGYLPDGSLVPRTQAGA LITDEAKALAQTLEMVRFGRVTSTEGTTANVQADTVCLHGDGEHALQFARRLRAAFSDEG ILVSAE >gi|333596726|gb|GL892086.1| GENE 1111 1177873 - 1178805 888 310 aa, chain - ## HITS:1 COG:ECs0737 KEGG:ns NR:ns ## COG: ECs0737 COG1984 # Protein_GI_number: 15829991 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 491 77.0 1e-139 MLTLIRAGLYTSVQDAGRFGLRQSGVSYCGALDRPSLEIANLLVGNAGSTAALEITLGQC EIEFGEETWFALTGAGCDATLDGKAVWTGWRLRAKAGQRLTLKRPLHGVRSYLAVAGGID VPEVLGSSSTDQKAGMGGHEGRLLRDGDRLRIKPSTRHFTTTQGVKQLLWGNVIRALPGP EYQEFDEAAKESFWRSPWKISPQSNRMGYRLQGQPLTRTTDRELLSHGLLPGVIQVPGNG QPIVLMNDAQTTGGYPRIACIIEADRYHLAQIPLGQPIHFVQCSLEEALKARQDQQRYLE QLAWRLDGKD >gi|333596726|gb|GL892086.1| GENE 1112 1178799 - 1179455 473 218 aa, chain - ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 361 84.0 1e-100 MQRARCYLLGETAVVLELEPPVTLATQKRIWRLAQRLPEMPGVVEAIPGMNNITVVLRDP HTGALDAIERLQRWWEESEALEPESRAIEIPVVYGGRGGPDLGVVAGHCGLTEKQVVELH SSVDYVVWFLGFQPGFPYLGGLSPQLHTPRRAEPRLSVPAGSVAIGGEQTGIYPLASPGG WQLIGHTSTPLFEPGQDAPILLRPGDTLRFIPQKEGVC >gi|333596726|gb|GL892086.1| GENE 1113 1179470 - 1180213 969 247 aa, chain - ## HITS:1 COG:ECs0735 KEGG:ns NR:ns ## COG: ECs0735 COG0327 # Protein_GI_number: 15829989 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 468 90.0 1e-132 MKNSELERLINEKLNTASFSDYGPNGLQVEGRDTVQKIITGVTASQALLDEAVRQEADAV IVHHGYFWKNESPIIRGMKRNRLKTLLANDINLYGYHLPLDAHPELGNNVQLAQLLGITV MGEIEPLVPWGELSMPVPGLELASWIEARLGRRPLWCGDTGPDTVKRVAWCTGGGQGFID SAARFGVDAFITGEVSEQTVHSAREQGLHFYAAGHHATERGGIRALSEWLTENTDLDVTF IDIPNPA >gi|333596726|gb|GL892086.1| GENE 1114 1180224 - 1181636 1021 470 aa, chain - ## HITS:1 COG:phrB KEGG:ns NR:ns ## COG: phrB COG0415 # Protein_GI_number: 16128683 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Escherichia coli K12 # 1 469 1 470 472 741 74.0 0 MPTHLVWFRADLRIHDNFALAAACRAKDANVLALFIATPEQWQQHDMAPRQAALLSAYLN DLQHSLAEKGIPLIYKEATDFAAQRQTVQAICQQHAVTHLYYNYQYEFNEQQRDRLLEKT LSGVICEGFDDSVMLAPGSVMTGSHEMYKVFTPFKNAFIKRLKEGLPECVTAPAVRGETI TELPAIRLNYPQQSFDETVFPASEKAAIARLRQFCTQGAAEYEARRDFPAIEGTSRLSAC LALGALSPRQCLHRLLAEKPHALDGGAGAVWLNELIWREFYRHLMTYHPDLCKHRPFIRW TEQVQWQSNETLLKAWQRGLTGFPIVDAAMRQLNETGWMHNRLRMITASFLVKDLLIDWR TGERYFISQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGQRFDADGEFIRRWVP ELKDVPAKAIHEPWVWADKQRVTLNYPRPIVDHKQARVATLAAYEAARKV >gi|333596726|gb|GL892086.1| GENE 1115 1182238 - 1182444 297 68 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1211 NR:ns ## KEGG: Ent638_1211 # Name: not_defined # Def: putative periplasmic protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 68 1 68 68 120 92.0 2e-26 MDLYKEFPAHIIFMRRTFAVVAGVLALSVMLFWKDRARFYSYLHRVWAKTSEKPVWMDQA EKATCDFY >gi|333596726|gb|GL892086.1| GENE 1116 1182844 - 1184523 1939 559 aa, chain + ## HITS:1 COG:kdpA KEGG:ns NR:ns ## COG: kdpA COG2060 # Protein_GI_number: 16128674 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Escherichia coli K12 # 1 557 1 557 557 833 82.0 0 MAAQAFLLIASFLLVLFVLARPLGTALARLINNVPLPGTRNIENVLWRISGISDREMNWR QYLMAILLLNIVGLIALFTLLMLQGSLPLNPQQLPGLSWHLALNTAVSFVTNTNWQSYAG ETTLSYFSQMAGLTVQNFLSAASGIAVIFALTRAFARQNVSTLGNAWVDVTRIVLWILMP VALIIALFFIQQGTLQNLLPYTPYTSLEGARELLPMGPVASQEAIKMLGTNGGGFFNANS SHPFEIPTALTNFVQMLAIFLIPAALCFAFGDVVNDRSQGRTLLWAMSLIFVVCVALVMW AEWNGNSHFMQLGANSNINLEGKESRFGILASSLYAVVTTAASCGAVNAMHDSFTALGGM IPMWLMQTGEVVFGGVGSGLYGMLLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALA ILVTPALVLLGTALALMTEAGRSGIFNPGIHGFSEVLYAVSSAANNNGSAFAGLSANSPF WNCLLAFCMFVGRFGVIIPVMAIAGALVNKKIQPTTTGTLPTHGALFVGLLIGTVLLMGA LTFIPALALGPVAEYLSLR >gi|333596726|gb|GL892086.1| GENE 1117 1184542 - 1186590 2546 682 aa, chain + ## HITS:1 COG:ECs0725 KEGG:ns NR:ns ## COG: ECs0725 COG2216 # Protein_GI_number: 15829979 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1145 90.0 0 MSRKQLALLEPTLVRQALMDAVKKLSPRVQWHNPVMFIVWTGSLLTTALAIAMGTGHLSG NATFTAAISLWLWFTVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAQMDH VPADELRKGDVVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGT RILSDWLVIQCSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLVALTLVFLLATATLW PFSAYGGTAVSITVLIALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD VDVLLLDKTGTITLGNRQASDFLPAPGVDQKTLADAAQLSSLADETPEGRSIVILAKQRF NLRQRDVQSLHATFVPFTAQTRMSGINIQDRMIRKGSVDAIRRHIEANNGHFPPEVDHLV ESVARQGATPLVVAEGANVLGVIALKDIVKGGIKERFAQMRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQ AAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYP QLNALNVMHLHSPASAILSAVIFNALIIVFLIPLALKGVSYKPLTAAAMLRRNLWIYGLG GLVVPFIGIKVIDVLLTLFRLV >gi|333596726|gb|GL892086.1| GENE 1118 1186603 - 1187178 657 191 aa, chain + ## HITS:1 COG:STM0704 KEGG:ns NR:ns ## COG: STM0704 COG2156 # Protein_GI_number: 16764074 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Salmonella typhimurium LT2 # 1 189 1 189 194 245 70.0 3e-65 MTMLRPAILLFILLSLITGGLYPLMTTVLGQWWFEDQANGSLIIQNGESRGSRLIGQNFT DPRYFQGRPSATAESPYNPMASGGSNLAGSNPDLDKAVAERVAALRAANPQASREVPVEL VTASASGLDYSLTPDAVVWQIPRVAAARQLTAEQVSQLVAEHTHKPLVSFIGMPVVNIVE LNLALDALRKN >gi|333596726|gb|GL892086.1| GENE 1119 1187179 - 1189866 2785 895 aa, chain + ## HITS:1 COG:ECs0723 KEGG:ns NR:ns ## COG: ECs0723 COG2205 # Protein_GI_number: 15829977 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Escherichia coli O157:H7 # 1 895 1 894 894 1471 81.0 0 MTDEPMRPDPDRLLEQTAEAHRGKLKIFFGACAGVGKTFAMLTEAQRLRAQGLDILIGVV ETHGRKETAALLKGLATQPPQRISHRGRLVTEFDLDAALARRPALILMDELAHSNAPGSR HPKRWQDVEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDSADEVVLV DLPPDDLRQRLHEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDDQMRAWRDL QGQERVWHTRDAILLCIGHGSGNEKLVRTAARLAAKFGSVWHAVYVETPQLHSLPENQRR AILSALRLAQELGAETATLSDPQEDKAILRYAREHNLGKIVIGRRQHRRWFSRESFADRL AHRAPDLDLVIVALDDKPAPLPTRTPDARTFGDKWRIQIRGCLVAVMLCALITVIASQWL IAFDAANLVMIYLLGVVVVALFYGRWPSVLATVINVISFDLFFIAPRGTLAVSDVQYILT FAVMLTVGLVIGNLTAGVRYQARIARYREQRTRHLYEMSKSLAVGRTQRDIVQTSEQFIR STFHASNLILLPDEQGRLRPLTSASGMTPWDEAIARWSFDKGLPAGAGTDTLPGVPYQIL PLRSADKNHGLVIVEPSNLRQLMIPEQQRLLETFTLLVASALERLALTTSEEQARLASER ESVRNSLLAALSHDLRTPLTVLFGQSEILTLDLAAEGSKHAMQASEIRQHVLNTTRLVNN LLDMARIQSGGFNLKKEWLTLEEVVGSALKMLEPGLGGRHIELDMPDPLTLIHVDGPLFE RVLINLLENAAKYAGAKARLGIAARVDNSALRLEVWDTGPGIPSGQERAIFEKFARGNKE SAIPGVGLGLAICQAIVDVHGGTISAENRPEGGARFCVTLPLETPPELDELPEDV >gi|333596726|gb|GL892086.1| GENE 1120 1189863 - 1190540 448 225 aa, chain + ## HITS:1 COG:kdpE KEGG:ns NR:ns ## COG: kdpE COG0745 # Protein_GI_number: 16128670 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 225 1 225 225 372 84.0 1e-103 MINVLIVEDELAISRFLRTALEGDGLRVHEAGTLQRGLIEAATRKPDLVILDLGLPDGDG IDFIREVRQWSQMPVLVLSARTEETDKIAALDAGADDYLIKPFGIGELQARLRVALRRHS ATSPSDPVYAFGDIRVDLAARRIVRGEEEIHLTPIEFRLLAVLLNNHGKVLTQRQLLSQV WGPNAVEHSHYLRIYMGHLRQKLEADPARPRHLLTETGIGYRFMI >gi|333596726|gb|GL892086.1| GENE 1121 1191179 - 1193377 2458 732 aa, chain + ## HITS:1 COG:STM0701 KEGG:ns NR:ns ## COG: STM0701 COG1982 # Protein_GI_number: 16764071 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 732 1 732 732 1348 85.0 0 MKMLKIAVSRACPECFTTSRDIVDISASDYIDVAAVVLAVSDIFNGVIEEIEATGFGIPV FIATHKEERVPAEFLSRIHGVFECSDTSNAYYGRQLEAAAQKYETQLRPPFFRALVDYVQ QGNSAFDCPGHQGGQFFRRHPAGNQFVDFFGETLFRADLCNADVAMGDLLIHEGAPCIAQ QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV YLETARNPYGFIGGIDAHCFEERYLRELVSEVAPGRARDERPFRLAVIQLGTYDGTIYNA RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF SQTSQIHKKDSHIKGQPRYVPHKRLNNAFMMHASTSPFYPLFAALDINARMHEGQSGRNM WMDCVVTGIEARKLILQNCQFIRPFVPETVDGRPWESWDTADIATDLRFFHFVPGERWHA FEGYAEHQYFIDPCKLLLTTPGINARTGEYDDFGVPATILANFLRENGIVPEKCDLNSIL FLLTPAEDMGKLQQLVAQLVRFEKLLQSDVPLKEVLPSLCKQHPERYADYTLRQICQEMH DLYARHNVKQLQKEMFRKSHFPRVMMDPQEANYAYLRGEVELVSLRDAEGRIAAEGALPY PPGVLCVVPGEVWGGSVLRYFAALEEGINLLPGFAPELQGVYVEECDGRKEVRCYVIKQP AAQPSLLKGEKL >gi|333596726|gb|GL892086.1| GENE 1122 1193392 - 1194687 1785 431 aa, chain + ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 430 9 438 439 713 92.0 0 MGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFAKCGMFSRK SGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGATLTPVQIGLAT IGVLWICTVANFGGARITGQLSSITVWGVIIPVVGLCIIGWFWFSPTLYANSWNPHHVPF FTAVGSSIAMTLWAFLGLESACANAEVVENPEKNVPIAVLGGTLGAAVIYIISTNVIAGI VPNMDLANSTAPFGLAFAQMFTPEVGKVIMGLMVMSCCGSLLGWQFTIAQVFKSSADEGY FPKIFSRVTKADAPVQGMLAIVIFQSGLSLMTISPSLNSQFNVLVNLAVVTNIIPYILSM AALVIIQKVAKVDPRKARAANIVALIGAIYSFYALYSSGQEAMLYGAMVTFMGWTLYGLV SPRFELKNKHS >gi|333596726|gb|GL892086.1| GENE 1123 1194831 - 1196471 1978 546 aa, chain - ## HITS:1 COG:STM0698 KEGG:ns NR:ns ## COG: STM0698 COG0033 # Protein_GI_number: 16764068 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Salmonella typhimurium LT2 # 1 546 1 546 546 1032 94.0 0 MANHSRAGQPAQQRDLINVAQLTAQYYVLKPVVGNAEHAVKFGTSGHRGSAARHSFNEPH ILAIAQAIAEERAKNGVTGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT PAVSNAILVHNKKGGAQADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANAL LANGLNGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLKLGVDPLGGSG IEYWKRIAEHYKLDLTIVNDHVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKEVAVGKTLVSSAMIDRVVD ALGRKLVEVPVGFKWFVDGLHDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE ITAVTGKNPQEHYNELAERFGAPSYNRIQAGATSAQKAALSKLSPEMVSASTLAGDPITA RLTAAPGNGASIGGLKVMTENGWFAARPSGTEDAYKIYCESFLGAEHRQQIEKEAVEIVS EVLKNA >gi|333596726|gb|GL892086.1| GENE 1124 1196496 - 1197041 490 181 aa, chain - ## HITS:1 COG:STM0697 KEGG:ns NR:ns ## COG: STM0697 COG3057 # Protein_GI_number: 16764067 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Salmonella typhimurium LT2 # 1 181 1 180 180 293 84.0 1e-79 MKTIEVDDELYQYIASQTRHIGESASDILRRMLKISAASQPTPATKDVVSQPSVVAQVKP AVMPAKDKVRAMRELLLSDEYAEQKKAVNRFMLVLSTLYSLDHKAFAEATESLHGRTRVY FAGDEQTLLQNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGT I >gi|333596726|gb|GL892086.1| GENE 1125 1197224 - 1197997 680 257 aa, chain + ## HITS:1 COG:ybfF KEGG:ns NR:ns ## COG: ybfF COG0596 # Protein_GI_number: 16128662 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 254 1 254 254 417 81.0 1e-117 MKLNTRAQTAQSPNNNSPIVLVHGLFGSLDNLGVLARDLVTDHAILQVDMRNHGLSGRSE EMTYAAMAQDLRDTLDANDIQKATFIGHSMGGKAVMALTALAPERISGLVVIDVAPVNYD VRRHDEIFAAINAVTASGVSTRQQAATVMREHLDEEGVVQFLLKSFVDGQWRFNVPVLWD QYSHIVGWETVPAWPHPTLFIRGGNSPYVTDAYRDTLLAQFPQARAHVIAGAGHWVHAEK PDAVLRAIRRYLTDTAN >gi|333596726|gb|GL892086.1| GENE 1126 1198126 - 1198413 330 95 aa, chain + ## HITS:1 COG:no KEGG:KP1_1661 NR:ns ## KEGG: KP1_1661 # Name: not_defined # Def: LexA regulated protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 95 24 118 120 122 88.0 6e-27 MAKEQTDRTTLDLFANERRPGRPKTNPLSRDEQLRINKRNQLKRDKNRGLKRVELKLNAD AVDALNELADARNISRSELIEEMLIAQLETLRGKA >gi|333596726|gb|GL892086.1| GENE 1127 1198569 - 1199099 755 176 aa, chain + ## HITS:1 COG:STM0694 KEGG:ns NR:ns ## COG: STM0694 COG0716 # Protein_GI_number: 16764064 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 336 96.0 1e-92 MAIIGIFFGSDTGNTENIAKNIQKQLGKDVADVHDIAKSSKEDLEGYDILLLGIPTWYYG EAQCDWDDFFPTLEEVDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGAAIVGHW PTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQVREELNLDDILNA >gi|333596726|gb|GL892086.1| GENE 1128 1199390 - 1199836 434 148 aa, chain + ## HITS:1 COG:ECs0714 KEGG:ns NR:ns ## COG: ECs0714 COG0735 # Protein_GI_number: 15829968 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli O157:H7 # 1 148 1 148 148 271 95.0 2e-73 MTDNNTALKKAGLKVTLPRLKILEVLQGPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIESRQREIAARHGI RLTNHSLYLYGHCAEGDCRENEHAHDAK >gi|333596726|gb|GL892086.1| GENE 1129 1199939 - 1200313 429 124 aa, chain - ## HITS:1 COG:no KEGG:ECL_03033 NR:ns ## KEGG: ECL_03033 # Name: not_defined # Def: lipoprotein YbfN precursor # Organism: E.cloacae # Pathway: not_defined # 17 123 1 107 109 170 91.0 2e-41 MNTLAGEVPPAWRLHMMKKWVIVALLASGLVACAQDQAQKEDSRLKEAYSACINTAQGSP EKIEACQSVLNVLKKEKAHEQFATQESVRVMDYQACIQARKTGNDQEVAKRCDKIWDEIR NNNK >gi|333596726|gb|GL892086.1| GENE 1130 1200313 - 1201728 1621 471 aa, chain - ## HITS:1 COG:no KEGG:ECL_03034 NR:ns ## KEGG: ECL_03034 # Name: not_defined # Def: putative outer membrane porin # Organism: E.cloacae # Pathway: not_defined # 1 471 1 465 465 787 88.0 0 MRTFSGKRSALALAIAGVTAMSGLVVAPEAKAAGFIEDSTLTGGVYYWQRERDRKDVAED KYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSSNKAYD EDWSGDKSGISLYKAAAKFKYGPVWARGGYIQPTGQTLLAPHWSFMPGTYQGAEAGANFD YGDAGALSFSYMWTNEYKAPWHIEMDKFYQGDRKTKVDYLHSLGLKYDFKNDLVLEAAFG QAEGYMDQYFAKASYKFDIAGSPLSTSYQFYGARDKADAQNNLRTNDEVALANDLYDGTA WLQALTFGYKIGQVDLRLEGTWVKADGNQGFFLQRMTPTYASSNGRLDIWWDNRSDFNAN GEKAVFFGAMYDLKNWNLAGWSVGASYAYGWDAKPSSAPIYDQSQRLKESAYSLDAAYVL QDGRAKGTMFKLHFTQYDNHSDLPSYGGGYNNIFQDERDVKFMVIAPFTIF >gi|333596726|gb|GL892086.1| GENE 1131 1202177 - 1203844 2205 555 aa, chain - ## HITS:1 COG:STM0686 KEGG:ns NR:ns ## COG: STM0686 COG0008 # Protein_GI_number: 16764056 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Salmonella typhimurium LT2 # 1 555 1 555 555 1120 94.0 0 MSEAEARPSNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQG QCNLRFDDTNPVKEDIEYVESIKNDVQWLGFNWSGDICYSSDYFDQLYAYAVELINKGLA YVDELSADEIREYRGTLTQPGKNSPFRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRR GYTSASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQG ESELVSMPNHPNKPEMGSRDVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK AERVEKDAEGNITTIFCTYDAETLSKDPADGRKVKGVIHWVSAQHALPVEIRLYDRLFSV PNPGAAEDFLAVINPESLIIKQGYAEPSLKAAEAGKAFQFEREGYFCLDSRYSTAEKPVF NRTVGLRDTWTKIGE >gi|333596726|gb|GL892086.1| GENE 1132 1204014 - 1205963 2266 649 aa, chain - ## HITS:1 COG:STM0685_1 KEGG:ns NR:ns ## COG: STM0685_1 COG1263 # Protein_GI_number: 16764055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 678 93.0 0 MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVPFIAQAGGAIFDNLALIFAIGV ASSWSKDSAGAAALAGAVGYFILTKAMVTINPEINMGVLAGIITGLVGGAVYNRWAGIKL PDFLSFFGGKRFVPIATGFFCLILAAIFGYVWPPVQHAIHAGGEWIVSAGAMGAGIFGFI NRLLIPTGLHQVLNTIAWFQIGEFTNAAGAVFHGDINRFYAGDGTAGMFMSGFFPIMMFG LPGAALAMYLAAPKARRPMVGGMLLSVAITAFLTGVTEPLEFLFMFLAPLLYLMHAILTG ISLFVATLLGIHAGFSFSAGAIDYVLMYNLPAASSNVWMLVVMGLVFFVIYFVLFSAVIR MFNLKTPGREDTKDDVVTSEANSNTEEGLTQLATSYIAAVGGTDNLKAIDACITRLRLTV GDSARVSDAMCKRLGASGVVKLNKQTIQVIVGAKAESIGDEMKKVVARGPVAAASTDSAP VADAPVAKPQAVPNAVTIAALVSPVTGDLVALEQVPDEAFASKAVGDGVAVKPTDKTVVS PAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALNGQGFTRLVEEGAEVVAGQPILE MDLDYLNANARSMISPVVCSNIDDFSGLVIQAQGQVVAGQTPLYEIKGK >gi|333596726|gb|GL892086.1| GENE 1133 1206289 - 1207089 788 266 aa, chain + ## HITS:1 COG:STM0684 KEGG:ns NR:ns ## COG: STM0684 COG0363 # Protein_GI_number: 16764054 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Salmonella typhimurium LT2 # 1 266 1 266 266 544 98.0 1e-155 MRLIPLATAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPLTAYKALVEMHKAGQ VSFKHVVTFNMDEYVGLPKEHPESYHSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDGDVNQ VPKYALTVGVGTLLDAEEVMILVLGAVKAQALQAAVEGNVNHMWTISCLQLHPKAVVVCD EPSTMELKVKTLKYFNELEAENIKGL >gi|333596726|gb|GL892086.1| GENE 1134 1207145 - 1208293 1272 382 aa, chain + ## HITS:1 COG:STM0683 KEGG:ns NR:ns ## COG: STM0683 COG1820 # Protein_GI_number: 16764053 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Salmonella typhimurium LT2 # 1 380 1 380 384 700 88.0 0 MYALTHGRIYTGHEILDDHAIVIANGLIERVCPLAELPPEIEQRSLNGAVISPGFIDVQL NGCGGVQFNDTAEAVTVETLEIMQRANEKSGCTSYLPTLITSSDDLMKQGIRVMRDYLAK HPNQALGLHLEGPWLNMVKKGTHNPNYVRKPDAELVDYLCANADVITKVTLAPEMTGTDV ISKLAAAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLVGAILDEPD VYCGIIADGLHVDYTNIRNAKRLKGDKLCLVTDATAPAGANIDQFIFAGKTIYYRNGLCV DENGTLSGSSLTMIEGVRNLVEHCGIALEEVLRMATLYPARAIGVDKQLGGIAPGMVANL TAFTHDYKIIKTIVNGNEVVTE >gi|333596726|gb|GL892086.1| GENE 1135 1208302 - 1209522 281 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 90 395 7 317 323 112 27 5e-23 MTPGGQAQIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERG LIKEVDQQASTGGRRAISIVTETRNFQAIGVRLGRHDTTLTLYDLSSKAIAEEHYPLPER TQETLEHALLNTIAHFIESCQRKIRELIAISVILPGLVDPESGVIRYMPHIKVENWGLVE ALEKRFKLTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG NVGEIGHIQVEPLGERCHCGNFGCLETVAANAAIEHRVRHLLEQGYQSRVTLDDCKIGAI CKAANKGDALACEVIEQVGRHLGKTIAIAINLFNPQKVVIAGEIVEAEKVLLPAIEGCIN TQALKAFRQNLPVVRSTLDHRSAIGAFALVKRAMLNGILLQHLLES >gi|333596726|gb|GL892086.1| GENE 1136 1209568 - 1210320 831 250 aa, chain + ## HITS:1 COG:ECs0705 KEGG:ns NR:ns ## COG: ECs0705 COG0647 # Protein_GI_number: 15829959 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 496 95.0 1e-140 MTIKNVICDIDGVLMHDNVAVPGAAEFLHRIIDKGMPLVLLTNYPSQTGQDLANRFATAG VNVPDSVFYTSAMATADFLKRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR SFNWEMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFVVGKPSPW IIRAALNTMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSQLDDIDTMPFRPSWI YPSVDEIDVI >gi|333596726|gb|GL892086.1| GENE 1137 1210571 - 1212235 2145 554 aa, chain + ## HITS:1 COG:STM0680 KEGG:ns NR:ns ## COG: STM0680 COG0367 # Protein_GI_number: 16764050 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Salmonella typhimurium LT2 # 1 554 1 554 554 1100 94.0 0 MCSIFGVLDIKTDAGELRKKALELSRLMRHRGPDWSGVYASDKAILAHERLSIVDVNAGA QPLYNEKKTHALAVNGEIYNHQALRAEYGDRYAFQTGSDCEVILALYQEKGPEFLDDLQG MFAFALYDSEKDAYLIGRDHIGIIPLYMGHDEHGNFYVASEMKALVPVCRTIKEFPAGSY LWSKDGEIRPYYQRDWFDYDAVKDNVTDKAELRQALEESVKSHLMSDVPYGVLLSGGLDS SVISAITKKFAARRVEDQERSEAWWPQLHSFAVGLEGAPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY FHKAPNAKELHEETVRKLQALHMFDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQD KMCGNGKMEKHILRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAKQVSDQQLET ASFRFPYNTPASKEAYLYREIFEELFPVPSAAECVPGGPSVACSSAKAIEWDESFKAMND PSGRAVGVHQSAYK >gi|333596726|gb|GL892086.1| GENE 1138 1213292 - 1214467 1393 391 aa, chain - ## HITS:1 COG:STM0671 KEGG:ns NR:ns ## COG: STM0671 COG0654 # Protein_GI_number: 16764048 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 391 1 391 391 618 81.0 1e-177 MTLLNTEVAVVGGGMVGGALALGLAQQGFDVTVIEQAAPPAFDPASQPDVRISAISAASV DLLRGLGVWEAVLAMRAHPYSRLETWEWENAHVSFDAAELKLPRLGYMVENNVLQLALWQ TLEAHPKVTLRVPDSLKALHRHEGGYLLTLDNDDELAVKLVVGADGANSQVRQMAGIGIH AWQYQQSCMLITVQCDNAPGESTWQHFTPNGPHAFLPLFDRWASLVWYDKPARIRQLQGL SMDQLQREIRQHFPSRLGNVTPVAAGAFPLMRRHALQYAREGLALVGDAAHTIHPLAGQG VNLGYRDVDALLDVLSNARGHAEAWASHQVLKRYQTRRMADNFIMQSGMDLFYAGFSNDL APVRILRNIGLMAAERAGGLKRQALKYALGL >gi|333596726|gb|GL892086.1| GENE 1139 1214603 - 1216027 506 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 394 17 406 462 199 32 4e-49 MTKKLHIKTWGCQMNEYDSSKMADLLDTTHGYQLTENAKEADVLLLNTCSIREKAQEKVF HVLGRWKLLKRKNPDLIIGVGGCVASQEGKLIRQRAPYVDIVFGPQTLHRLPEMINKVRG SRSPVVDVSFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPADD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFAELLRLVAAIDGIDRIRFTTSH PMEFTDDIIDVYRDTPELVSFLHLPIQCGSDRVLNLMGRPHTVLEYKSTIRKLREARPDI QISSDFIVGFPGETADDFERTMKLIGEVNFDVSYSFIFSARPGTPAADMVDDVPEEEKKQ RLYILQERINQQANAWSRRMLGTVQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIG KFVDVEIVEVLTNSLRGKVVRTEDEMGLRIAETPESVISRTRKVNDSGVGIYQP >gi|333596726|gb|GL892086.1| GENE 1140 1214603 - 1216027 308 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229245919|ref|ZP_04369978.1| SSU ribosomal protein S12P methylthiotransferase [Catenulispora acidiphila DSM 44928] # 145 458 218 528 529 123 30 4e-26 MTKKLHIKTWGCQMNEYDSSKMADLLDTTHGYQLTENAKEADVLLLNTCSIREKAQEKVF HVLGRWKLLKRKNPDLIIGVGGCVASQEGKLIRQRAPYVDIVFGPQTLHRLPEMINKVRG SRSPVVDVSFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPADD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFAELLRLVAAIDGIDRIRFTTSH PMEFTDDIIDVYRDTPELVSFLHLPIQCGSDRVLNLMGRPHTVLEYKSTIRKLREARPDI QISSDFIVGFPGETADDFERTMKLIGEVNFDVSYSFIFSARPGTPAADMVDDVPEEEKKQ RLYILQERINQQANAWSRRMLGTVQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIG KFVDVEIVEVLTNSLRGKVVRTEDEMGLRIAETPESVISRTRKVNDSGVGIYQP >gi|333596726|gb|GL892086.1| GENE 1141 1216191 - 1217237 1308 348 aa, chain + ## HITS:1 COG:STM0669 KEGG:ns NR:ns ## COG: STM0669 COG1702 # Protein_GI_number: 16764046 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Salmonella typhimurium LT2 # 1 348 14 361 361 632 96.0 0 MNIDTREISLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVNAAA DILRSLYVDTAPMRGEIQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKP RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLAEVEEISFN FFHSEDVVRHPVVARIVNAYEAWEEADQKRRAELAAERKREAQEHEQK >gi|333596726|gb|GL892086.1| GENE 1142 1217234 - 1217701 663 155 aa, chain + ## HITS:1 COG:STM0668 KEGG:ns NR:ns ## COG: STM0668 COG0319 # Protein_GI_number: 16764045 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 1 154 1 154 157 256 90.0 8e-69 MSQVILDLQLACEDNSGMPEEAQFQKWLDAVIPQFQEESEVTIRLVDEAESHELNLTYRG KDKPTNVLSFPFEAPPGMEMPLLGDLIICRQVVEQEAKEQQKPLEAHWAHMVVHGSLHLL GYDHIEDDEAEEMESLETEIMLALGYEDPYIAEKE >gi|333596726|gb|GL892086.1| GENE 1143 1217786 - 1218664 1180 292 aa, chain + ## HITS:1 COG:STM0667 KEGG:ns NR:ns ## COG: STM0667 COG4535 # Protein_GI_number: 16764044 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Salmonella typhimurium LT2 # 1 292 1 292 292 480 93.0 1e-135 MSDDNSHSSDTTTTKKGFFSLILNQLFHGEPKNRDELLELIRDSGQNDLIDEDTREMLEG VMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK DLLPFMRSDAEAFSMEKVLRPAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT IEDILELIVGEIEDEYDEEEDIDFRQLSRHTWTVRALASIEDFNDTFGTSFSDEEVDTIG GLVMQAFGHLPARGETVDIDGYQFKVAMADSRRIIQVHVRMPDDSPVPKRED >gi|333596726|gb|GL892086.1| GENE 1144 1218670 - 1220208 2103 512 aa, chain + ## HITS:1 COG:STM0666 KEGG:ns NR:ns ## COG: STM0666 COG0815 # Protein_GI_number: 16764043 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 512 1 512 512 908 88.0 0 MAFAPLFERQRVRLLLALLLGASGTLAFSPYDIWPAAILSLMGLQGLTLNRRPVQAAAVG YFWGLGLFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTGLFAGILSRLWPKTT WLRVAIAAPVVWQITEFLRGWVLTGFPWLQFGYSQVDGPLKGLAPVMGVEAINFLLMMVS GLLVLALVTRSWKPLVAALILFALPFPLRYIQWFTLEPARATQVSLVQGDIPQSLKWDEN QLLNTLKIYANATEEVMGKSQLIIWPESAIPDLEINQQPFLKMMDDLLRARGSTLITGIV DARLNQQNRYDTYNAIITLGKDSDYSYTSTNRYNKNHLVPFGEFVPLESILRPLAPFFDL PMSSFSRGPYVQPQLHAHGFALTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSI GPWQHFQMARMRSLELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTSGL TPYARTGNWPLWILTTLFGFAAVLMSLRQRRK >gi|333596726|gb|GL892086.1| GENE 1145 1220610 - 1221515 1257 301 aa, chain + ## HITS:1 COG:STM0665 KEGG:ns NR:ns ## COG: STM0665 COG0834 # Protein_GI_number: 16764042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 301 7 308 308 545 93.0 1e-155 MQLRKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQK VVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQ KQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRI ISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGTAQSKEAYGCMLRKG DEDFKKLIDDTIAQAQTSGEAAKWFDKWFKNPIPPKNLNMNFELSDDMKALFKSPNDKAL N >gi|333596726|gb|GL892086.1| GENE 1146 1221671 - 1222120 455 149 aa, chain + ## HITS:1 COG:STM0664 KEGG:ns NR:ns ## COG: STM0664 COG0765 # Protein_GI_number: 16764041 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 111 1 111 246 213 92.0 9e-56 MSIDWNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRF LSSIGTLYVELFRNVPLIVQFFTWYLVIPELLPEDLGMWFKAELDPNVHFLSRPCCVWGC SPLRASASRCVPPYSHCRAGKRMRHWRWA >gi|333596726|gb|GL892086.1| GENE 1147 1222012 - 1222410 512 132 aa, chain + ## HITS:1 COG:gltJ KEGG:ns NR:ns ## COG: gltJ COG0765 # Protein_GI_number: 16128637 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 132 115 246 246 249 98.0 1e-66 MLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTS EMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLVE RKVRLPGNLGGK >gi|333596726|gb|GL892086.1| GENE 1148 1222410 - 1223084 915 224 aa, chain + ## HITS:1 COG:ECs0692 KEGG:ns NR:ns ## COG: ECs0692 COG0765 # Protein_GI_number: 15829946 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 223 1 223 224 350 93.0 2e-96 MYEFDWSSIVPSLPYLLDGLAITLKITVIAIIVGIVWGTLLAVMRLSSFKPLAWFATAYV NVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGI QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKRTV >gi|333596726|gb|GL892086.1| GENE 1149 1223084 - 1223809 534 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 210 43 2e-52 MISLKNVSKWYGHFQVLTDCSTEVKKGDVVVVCGPSGSGKSTLIKTVNGLEPVQQGEIVV NGTKVNDRKTNLAQLRSHVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKKAAREKGLKL LERVGLSAHADKFPAQLSGGQQQRVAIARALCMDPVAMLFDEPTSALDPEMINEVLDVMV ELAHEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKEEFFANPKSERAKDFLAKIL H >gi|333596726|gb|GL892086.1| GENE 1150 1223929 - 1224864 1032 311 aa, chain + ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 1 310 1 310 311 560 87.0 1e-159 MAQPIILDCDPGHDDAIALVLALASPELDVKAVTSSAGNQTPDKTLRNVLRMLTLLKRTD IPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPDFAPQNCTAVELMAKVLRESAEPVT LVATGPQTNVALLLNSYPELHSNIAGIVIMGGAMGLGNWTPAAEFNIFVDPEAAEIVFQS GLPIVMAGLDVTHRAQIMAQDIERFRSVGNPVATTVAELLDFFMEYHKAEKWGFHGAPLH DPCTIAWLLKPDMFTTVERWVGVETQGKYTQGMTVVDYYSLTGNKPNTTVMVDIDREAFV DLLAERLAYYI >gi|333596726|gb|GL892086.1| GENE 1151 1225153 - 1225854 129 233 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_4206 NR:ns ## KEGG: Rahaq_4206 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 233 1 229 230 184 39.0 2e-45 MYYSEEIIERIGTDKELAVRLDKALMGVKEGVVDYVNGLGDATTRLLYYTSCLTENYQDV CKKLGSEDIRFICALYELVKHRDIIFRMLKIYIETILKNKNETEKKTILQKLTPFTKNYS IKYISKNGLIYAVASYICYGNKMNLSVQNALMTKIGSRVGWIVGGLNIYGFVQRAAESAD NLKNFCPLFYNALYMEGLEMMYFLIEPMIMKSGYLNINTATDEEIVRALKRMM >gi|333596726|gb|GL892086.1| GENE 1152 1226088 - 1226567 -52 159 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 159 1 163 163 172 50.0 3e-43 MSIPAHIWLTDDNGSPLIGEYSMPTRLGSTELKSFNHSVWIPTDHNTGKLTGTRLHVPIR FEKEIDRLTPYLFRAVCQGRVLKEAVIKMYKINEAGIEVEYFNIILENVKITQISPVLFP VGIASKHMEEVEIRYESIEWKYTDGNIMFKDSWNERVIA >gi|333596726|gb|GL892086.1| GENE 1153 1226796 - 1227278 487 160 aa, chain - ## HITS:1 COG:no KEGG:ECL_03053 NR:ns ## KEGG: ECL_03053 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 160 2 161 161 295 97.0 5e-79 MNKVAQFYRELVATLTERLRNGERDIDALVEQARARVTQTGELTRTEVEEVTRAVRRDLE EFARSYEESQDEMADSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV GLGNLVCEKCHHHMAVYTPEVLSLCPKCGHDQFQRRPFEP >gi|333596726|gb|GL892086.1| GENE 1154 1227493 - 1230075 3438 860 aa, chain + ## HITS:1 COG:leuS KEGG:ns NR:ns ## COG: leuS COG0495 # Protein_GI_number: 16128625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 860 1 860 860 1706 94.0 0 MQEQYRPEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGD VIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYD WSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCD TKVERKEIPQWFIKITAYADELLNDLDNLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYD QTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAENNPELATFIDECRNTKVAEADMATMEK KGVDTGFKAIHPLTGEAIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFATKYGLTIKPVI LAADGSEPDLSEQALTEKGTLFNSGEFSGLSFEEGFNAIADKLASLGVGERKVNYRLRDW GVSRQRYWGAPIPMVTLEDGTVMPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG QPALRETDTFDTFMESSWYYARYTCPQYKEGMLDSDAANYWLPVDIYIGGIEHAIMHLLY FRFFHKLMRDAGLVNSDEPAKQLLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGR IVKAKDAEGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQE SGVEGANRFLKRVWKLVYEHTSQGDAPALNVAALSEDQQALRRDVHKTIAKVTDDIGRRQ TFNTAIAAIMELMNKLAKAPQDGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEG DIDNAPWPVADESAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLE GVTVRKVIYVPGKLLNLVVG >gi|333596726|gb|GL892086.1| GENE 1155 1230195 - 1230659 418 154 aa, chain + ## HITS:1 COG:ECs0679 KEGG:ns NR:ns ## COG: ECs0679 COG2980 # Protein_GI_number: 15829933 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Escherichia coli O157:H7 # 1 130 36 165 193 189 73.0 1e-48 MIFDSSDPNGPLSRAIRNQLRLNDVELIEKGTLRQDVPSLRVLKSTLSQDTASIFQDGRT AEYQMVLTVDAAVLMPGKDIYPINTKVYRSFFDNPQTALAKDAEQQIIIKEMYDKAAEQL IRRLPAIAASTKKGADVIETPDASTPDMPTSLGN >gi|333596726|gb|GL892086.1| GENE 1156 1230659 - 1231690 1007 343 aa, chain + ## HITS:1 COG:holA KEGG:ns NR:ns ## COG: holA COG1466 # Protein_GI_number: 16128623 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Escherichia coli K12 # 1 343 1 343 343 530 88.0 1e-150 MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESLDAVRHAAAAQGFDEHHTFQIDNSTD WNAIFSLCQAMSLFASRQTIQILLPENGPNAAINEQLTMLVSLLHGDLLLIVRGNKLTKA QENAAWFTRLATSAVLVTCQTPEQAHLPKWVAARAKQHNLQLDDAASQLLCYCYEGNLLA LAQALDRLALLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLSAKSKRALHILQQLRLEG SEPVILLRTLQRELLLLNNLKRQSAHTPLRALFDKHRVWQNRRAMTTEAINRLSQEQLRQ AVQLLMRAELTLKQDYGQSVWAELESLSLLLCHKALADVFIDG >gi|333596726|gb|GL892086.1| GENE 1157 1231683 - 1232348 513 221 aa, chain + ## HITS:1 COG:STM0645 KEGG:ns NR:ns ## COG: STM0645 COG1057 # Protein_GI_number: 16764022 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Salmonella typhimurium LT2 # 4 216 1 213 213 337 77.0 1e-92 MGDMYSLQAMYGGTFDPVHYGHLKPVEILANLIGLQRVIIMPNNVPPHRPQPEATSEQRK TMLALAIADKPLFTLDERELRRDTPSWTSQTLREWRAEQGPEKPLAFIIGQDSLLNFPSW YQYDTILDNSHLLVCRRPGYPLTMRDAQHQQWLDMHLTDNIEELHSLPAGKIYLAETPWF DISATLIRERLQQGLDCNDLLPSPVLAYIHAHGLYQKSTDA >gi|333596726|gb|GL892086.1| GENE 1158 1232617 - 1232934 305 105 aa, chain + ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 104 1 104 105 178 91.0 2e-45 MQGKALQDFVIDKIDDLKGQDIIAIDVKGKSSITDCMIICTGTSTRHVVSIADHVVQESR AAGLLPLGVEGEATADWVVVDLGDVIVHVMQEESRRLYELEKLWG >gi|333596726|gb|GL892086.1| GENE 1159 1232971 - 1233405 373 144 aa, chain + ## HITS:1 COG:STM0641 KEGG:ns NR:ns ## COG: STM0641 COG1576 # Protein_GI_number: 16764018 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 144 12 155 155 282 97.0 2e-76 MPDWVQTGFTEYLRRFPKDMPFELVEIPAGKRGKNADIKRILDKEGELMLAAAGKNRIVT LDIPGKPWDTPQLAHELERWKQDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPL VRVLVAESLYRAWSITTNHPYHRE >gi|333596726|gb|GL892086.1| GENE 1160 1233434 - 1235335 2201 633 aa, chain + ## HITS:1 COG:STM0640 KEGG:ns NR:ns ## COG: STM0640 COG0768 # Protein_GI_number: 16764017 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 1 633 1 633 633 1248 94.0 0 MKLQNSFRDYTAESALFVRRALVAFTGILLLTGVLIANLYNLQIVRYTDYQTRSNENRIK LVPIAPSRGIIYDRNGTPLALNRTIYQIEMMPEKVDNVQDTLNALRSVVDLNDDDIAAFK KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS KINDKDVERLDKDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK EVPPQAGHDVYLTLDLKLQQYIETLLAGSRAAVIVTDPRTGGILSMVSMPSYDPNLFVDG ISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPGWWQL PGSEKRYRDWKKWGHGHLNVTKSLEESADTFFYQVAYDMGIDRLSEWMSKFGYGHYTGID LAEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKAMMILINDGVVKV PHLLQSTVEDGKKVPWIQPHEPPVGDIHSGYWEIAKDGMYGVANRPNGTAHKYFAGAPYK VAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYDNPQVAVAMILENGGAGPAV GTIMRQILDHIMLGDNNTELPAENPAAAAAEDQ >gi|333596726|gb|GL892086.1| GENE 1161 1235338 - 1236450 1288 370 aa, chain + ## HITS:1 COG:STM0639 KEGG:ns NR:ns ## COG: STM0639 COG0772 # Protein_GI_number: 16764016 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Salmonella typhimurium LT2 # 1 370 1 370 370 605 96.0 1e-173 MTDNPNKKSLWDKIHIDPAMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIM VVMAQIPPRVYEGWAPYLYIFCIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAV PLMVARFINRDVCPPSLKNTAIALVLIFLPTLLVAAQPDLGTSILIALSGLFVLFLSGLS WRLIGIAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPETDPLGAGYHIIQSKIAIGSGGL RGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILVLLALYVLLIMRGLYIAARAQT TFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH THRKMLSKSV >gi|333596726|gb|GL892086.1| GENE 1162 1236467 - 1237573 1210 368 aa, chain + ## HITS:1 COG:rlpA KEGG:ns NR:ns ## COG: rlpA COG0797 # Protein_GI_number: 16128616 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Escherichia coli K12 # 1 368 1 362 362 454 79.0 1e-128 MRKQWLGICIAASLLAACTSDDGQQQATVAPPQPAVCNGPIVEISGADPVYEPLNASVNQ DYQRDGKSYKIVQDPSRFSQAGFAAIYDAEPGSNLTASGETFDPMQITAAHPTLPVPSYA RITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSG PGTACTTVAKQTYALPARPDLSGGMGGASTPAEPAQPQGEVRAISNDTLQSEVATGAPVK SSGFLGAPTTLASGVIETNEPAPAPAPVVAAPAAQPAPVTVPAATQTAAPATVSGSYVVQ VGAVSDQTRAEQYQQRLSQQFGVPGRVEQNGAVWRIQMGPFASKSQAASLQQRLQSEAQL QSFIAVAK >gi|333596726|gb|GL892086.1| GENE 1163 1237713 - 1238924 1542 403 aa, chain + ## HITS:1 COG:STM0637 KEGG:ns NR:ns ## COG: STM0637 COG1686 # Protein_GI_number: 16764014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Salmonella typhimurium LT2 # 1 403 1 403 403 789 94.0 0 MKTTFSARFVQRMALTTALCAAAFSAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVL AEQNADARRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFL KPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVSALGLKNSHFQTVH GLDAEGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQTNRNGLLWDNSLNVDG IKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGRETESKKLLTWGFRFFETVNPLKA GKEFASEPVWFGDNDRASLGVDKDLYLTIPRGRMKDLKASYVLNTTELHAPLQKNQVVGT INFQLDGKTIDQRPLVVLEEIPEGNFFGKIIDYIKLMFHHWFG >gi|333596726|gb|GL892086.1| GENE 1164 1239032 - 1239295 366 87 aa, chain + ## HITS:1 COG:STM0636 KEGG:ns NR:ns ## COG: STM0636 COG2921 # Protein_GI_number: 16764013 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 87 1 87 87 149 94.0 2e-36 MKTKLNELLEFPTPFTYKVMGLAKPELVDQVVEVVQRHAPGDYSPSVKPSSKGNYHSVSI TITATHIEQVETLYEELGNIEIVRMVL >gi|333596726|gb|GL892086.1| GENE 1165 1239390 - 1240031 494 213 aa, chain + ## HITS:1 COG:ECs0668 KEGG:ns NR:ns ## COG: ECs0668 COG0321 # Protein_GI_number: 15829922 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Escherichia coli O157:H7 # 23 213 1 191 191 342 84.0 4e-94 MYQDKILVRHLGLQPYEPVSQAMHDFTDMRDDTTPDEIWLVEHLPVFTQGQAGKAEHLLM TGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAEYGIDA HPRADAPGVYVGEMKICSLGLRIRKGCSFHGLALNINMDLTPFQRINPCGYAGMEMTQVR QWVDTATPDNIRPVLLKNFLALLNNPTYEYIPA >gi|333596726|gb|GL892086.1| GENE 1166 1240323 - 1241276 681 317 aa, chain + ## HITS:1 COG:STM0634 KEGG:ns NR:ns ## COG: STM0634 COG0583 # Protein_GI_number: 16764011 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 437 69.0 1e-122 MEPTNLPAKRLNETSGEDKPQIFRTLRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAI SQSIQKLRAIFPDPLFIRKGQGVTPTAYATHLHEYISQGLESILGALDLTGSYDKQRTIT IGTSPSVGVLVMPAIYQAVKQHAPQLLIRNVPVNDPETQLAQFQTDLIIDSNSFTARALG HNVLYSDSLALVCRHNHPALGAPLTPENLRQYEHATFMSEGQGPDPLRQRIDELFPDRLI SFSSYNMFTLAALIGSSDLLCIMPVRLFTLLQKCWPLESIPVSQLSTESVEISLHYNKLS LRDPVLENVINVIRQAF >gi|333596726|gb|GL892086.1| GENE 1167 1241484 - 1242449 919 321 aa, chain + ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 643 97.0 0 MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSSRIQGIKAAMR KNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPQKLA QTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPNIKIETLVPDFRGRMDRAL DILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPHIPTKSGLMVGLGE TNAEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEAMAMGFTHAA CGPFVRSSYHADMQAKGEEVK >gi|333596726|gb|GL892086.1| GENE 1168 1242529 - 1242732 176 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 55 3 57 83 72 61 8e-11 MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKSADDDITA QKLSHKE >gi|333596726|gb|GL892086.1| GENE 1169 1242858 - 1243646 664 262 aa, chain - ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 372 72.0 1e-103 MYVAVGQFAVTPDWSENAEKCVSLMHQAKQKGAALLVLPEALLARDDGDPDLSVKSAQTL EGAFLKRLLAESVGSTHTTILTIHVPSTPGRAVNTLVAIREGAIIASYAKLHLYDAFSIQ ESRRVDPGSVIPPLIEVEGFKVGLMTCYDIRFPELALNLALQGAEVLVLPAAWVKGPLKE HHWATLLAARALDTTCYVVAAGECGNRNIGQSRVVDPLGVTVAAAAEAPALLLTEIISAR IALAREQLPVLRNRRFAPPQLI >gi|333596726|gb|GL892086.1| GENE 1170 1243782 - 1244096 306 104 aa, chain + ## HITS:1 COG:ECs0663 KEGG:ns NR:ns ## COG: ECs0663 COG0239 # Protein_GI_number: 15829917 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Escherichia coli O157:H7 # 1 104 24 127 127 154 83.0 5e-38 MRFNPLHQAIPMGTLAANLMGAFIIGMGLAWFNRMTQIDPMWKVLITTGFCGGLTTFSTF SAEVVFLFQEGRMGWALTNIAVNMLGSFAMTAIAFWLFSSASGH >gi|333596726|gb|GL892086.1| GENE 1171 1244168 - 1244254 57 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKENLLGAGMVLLSVAIVASFLKIYLVG >gi|333596726|gb|GL892086.1| GENE 1172 1244316 - 1244525 344 69 aa, chain - ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 122 98.0 1e-28 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQRVEFEITNGAKG PSAANVIAL >gi|333596726|gb|GL892086.1| GENE 1173 1244716 - 1245333 629 205 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1158 NR:ns ## KEGG: Ent638_1158 # Name: pagP # Def: palmitoyl transferase # Organism: Enterobacter_638 # Pathway: not_defined # 15 205 1 191 191 324 83.0 1e-87 MVNFALNTKNGYCIVMLRNKFILLFLIIFGQLTIASVAHAEDNATEKGWFTTFTDNVAQT WSEPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGAGFGQSRWDEKGNWHGLYLMAFKD SYNKWEPIGGYGWEKTWRPLSDDNFRLGLGYTAGFTARDNWKYIPVPVLLPLASVGYGPA TFQMTYIPGTYNNGNVYFAWMRFQF >gi|333596726|gb|GL892086.1| GENE 1174 1245453 - 1248569 3256 1038 aa, chain - ## HITS:1 COG:RSp0928 KEGG:ns NR:ns ## COG: RSp0928 COG3696 # Protein_GI_number: 17549149 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Ralstonia solanacearum # 1 1038 1 1038 1047 1395 67.0 0 MIAAVIRASLRNRLLVILAALMIAGWGGWAVQRAPLDALPDLSDVQVIIKASYPGKAPQV IEDQVTWPLTTSMLSVPGAKTVRGFSMFGDAYVYVLFEDGTDLYWARSRVLEYLSQVQTQ FPPGVKVSLGPDATGVGWIYEYALIDRSGKHSLADLRALQDWTLKYELKTVANVSEVASI GGMVRQYQIVADPAKMRALNITHSQLSSAVQAANKESGGALLEMGEAEYMVRTTGYLHTL EDFRQVVIASRNGVPVLLKDVATLGIGPEIRRGVAELNGEGEVAGGVVVMRYGQNALETI RAVKAKLSELQKTLPKGVEIVPVYDRATLIEESVKTLTHKLLEEFAVVVVVCALFLFHLR SALVAIVSLPLGILGAFVVMHYQGINANIMSLGGIAIAIGAMVDAAIVMIENMHKVLEQW RHDNPGTEPTSGDYWRLAERAAVEVGPALFCSLLIITLSFIPVFSLEAQEGRMFSPLAFT KTWSMAVAAGLGITLVPVLMGYFIRGKIPDEKANPINRVLIRLYEPLLDKVLTFPKTTLA LACLLLFATLWPLSHLGSEFMPPLDEGDLLYMPSTLPGISAREASRLLQQTDRLIKSVPE VASVFGKAGRAESATDPAPLTMLETTIHFKPREQWRPGMTPQKLVDELDKTVSLPGIANV WVPPVRNRLDMLATGIKSPVGIKVNGNNIADIERVARQIEQVVKHVPGVTSALAERLKGG RYVDIRIDRQKAARYGVSVDELQSLVSTLVGGENIGEVIQGRERYPINLRYPRDLRDNID KLRVLPVVTANGSQVALGELADIVVSEGPPMLKSENARLSSWVYVDLRGRDLKSAVDEMQ KRVAEQVTLPQGVSLAWSGQFEYLERATASLKIVLPVTLMIIFILLWLTFKRISDVLIIM GTLPFALIGGVWFLWLLEYNLSVAGAVGFIALSGVAAEFGVIMVLYLNHALDKYRAREPE GGNALLMRAIHEGAVLRVRPKVMTVATIMAGLLPIMWGGGSGSEVMQRIAAPMIGGMVTA PLLSMLVIPALYKLLHQR >gi|333596726|gb|GL892086.1| GENE 1175 1248566 - 1249771 1151 401 aa, chain - ## HITS:1 COG:RSp0927 KEGG:ns NR:ns ## COG: RSp0927 COG0845 # Protein_GI_number: 17549148 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 8 393 10 414 513 249 40.0 5e-66 MKITTLTAVAIAIAAAAAGGYMAGQKQTRQPVSAPHATERKVLYWYDPMMPGQRFDKPGK SPFMDMDLVPRYADEEQAASGVAISTQQQQNLGMKTVKAEMRHLVSPFSAFATVSTDERN VSVVSAPASGVVSKLFVNAPQQQVKAGEALAQLWIPQWTTAQQEYLAVRQLGDAALTRAA RDRLALQFMPEEVIRLLERSGKPQTTLTLRAARAGYVVKLDVREGAQISATAPLFEIASL DPVWLVVDYPQTQAQSLAVGSKMVATSESWPGESFHGVVSELLPQMEASTRTLKARIVLE NPAHKLKPGMYLSVTRAEETQRPPVLAVPEEAVINSGESSRLLLATGDGYFRPVTVKTGL TAQGWTAILSGVKEGDAVVTSGQFLIDSEASLRSVMPEVTP >gi|333596726|gb|GL892086.1| GENE 1176 1249768 - 1251024 1181 418 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1155 NR:ns ## KEGG: Ent638_1155 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 418 1 418 418 541 80.0 1e-152 MTRHTLSQWLGGVLFGLLSSAAQAEPWTLEHTLTEAERYSAELSASRNEAQALDAMADSA TQLPDPKLKFGIENVPVQGRNDRRLTREGMTMQKIGIMQSYVSAEKRERKARTFQAQARG VLAKSEAVRAALQRDTAQAWLDLALAQQALKIARALVRETERQRGVQKASVGSGSATPDS VLALRTILIAMRDKETLAQRDVQLAQSRLLQLTGHAITDVRGPLPRYQRLPADEMTLQEG IVKHPEVEAARREAETAKARSAQSAVAAIPDVDVEVYYAHRAEGYDDMAGVMFSVDLPLF QSKRQDKDYAADVSRSIQAADELTLLKREHIAQVQALVAQYQAAQTLWQRQRDEVLPLQR QRLAVLTAQYRSGQSAPGALLEARRDVLDTELAVNQAERDMARTWAAVNWLIPQELAQ >gi|333596726|gb|GL892086.1| GENE 1177 1251037 - 1251330 295 97 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1154 NR:ns ## KEGG: Ent638_1154 # Name: not_defined # Def: putative copper efflux system periplasmic protein CusF # Organism: Enterobacter_638 # Pathway: Two-component system [PATH:ent02020] # 1 95 1 101 103 113 62.0 2e-24 MRTLFLSALAGAAVSFTSYTVQANQTWQGHGVVQSIADNTVMLQHDAIPELKWPAMTMPF TLSAGATLNGAKPGDEVTFTLERAGDGFQIVSLTPAR >gi|333596726|gb|GL892086.1| GENE 1178 1251384 - 1251782 237 132 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1153 NR:ns ## KEGG: Ent638_1153 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 132 1 133 133 195 78.0 4e-49 MHASWTYRLRFFKKHLLMFLVAFGWLLIQSQVAVASHACSMDVRGEVATIQHMDMMAPGP QHATGASPLCEKHCVPDQVQKDPAQPHLVALPAVMTLTLITPESASADHSAWSVTPPAVG PPATIRYCRFRE >gi|333596726|gb|GL892086.1| GENE 1179 1251950 - 1252063 57 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCRINGLFLLIKIKKETTKGNDDNIFAKPASFILSRY >gi|333596726|gb|GL892086.1| GENE 1180 1252124 - 1253491 1743 455 aa, chain + ## HITS:1 COG:STM0627 KEGG:ns NR:ns ## COG: STM0627 COG3069 # Protein_GI_number: 16764004 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 1 455 1 455 461 626 94.0 1e-179 MLTFLELLIGVVVIVGVARYIIKGYSATGVLFVGGLTLLIISALMGHQVLPASEASTGYT ATDIVEYIKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLM VAAYFLACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILSPTSGD VVLAAKAAEMSLIDFAFKTTLPISITAILGMGVAHFFWQRYLDKKENVSHEMMDVSEITT TAPAFYSILPFTPIIGVLIFDGKWGPQLHIITILVICMLLAAILEFVRGFNTQKVFTGLE VAFRGMADAFAGVVMLLVAAGVFAQGLSTIGFIQSLISIATSFGSASIILMLVLVVLTML AAMTTGSGNAPFYAFVEMIPKLAHSSGINPAYLSIPMLQASNLGRTISPVSGVVVAVAGM AKISPFEVVKRTSVPVLVGLIIVIIATEVLVPGAA >gi|333596726|gb|GL892086.1| GENE 1181 1253586 - 1254395 566 269 aa, chain + ## HITS:1 COG:rna KEGG:ns NR:ns ## COG: rna COG3719 # Protein_GI_number: 16128594 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli K12 # 13 269 11 268 268 426 77.0 1e-119 MFRKDIVIPSGAVALALCVFSIQADPLKATQYGDFDRYVLALSWQTGFCQSMVERNRNEP EECRLQKESNNKTDFLTVHGLWPGLPKSIAARGVDERRWMRFGCATRPVPNMPEAKASRK CDAAETGLSLSGAAKLNSVMPGAGGNSCLERYEYAKHGVCFGFDPDAYFGTMVRMNQEVK RSAVGQFLAENYGKTVRRSDFDAAVAKSWGKQSVKAFKLTCHGNPAYLTEMQISLKSSAI NTPLSANAFAPQPHPGNCGKQFVIDKAGY >gi|333596726|gb|GL892086.1| GENE 1182 1254425 - 1255045 570 206 aa, chain - ## HITS:1 COG:RSc1820 KEGG:ns NR:ns ## COG: RSc1820 COG1853 # Protein_GI_number: 17546539 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Ralstonia solanacearum # 1 201 6 206 207 248 60.0 4e-66 MYFYQPSQGHGLPHDPLNAIIGPRPIGWISSCDKAGQLNLAPYSFFNCFNYRPPIIGFSS NGWKDSVRNISETGEFVWNLATRDLAEAMNETSATLPHDEDEFTFAGLTPVASQLVSAPR VAESPVNFECRLSQCIQLTGADGTPIDTWLVLGEVVGVHIAEMLLEEGIYQTAKAQPILR AGGPTAYYAISDSHRFDLVRPDARRG >gi|333596726|gb|GL892086.1| GENE 1183 1255308 - 1255718 503 136 aa, chain + ## HITS:1 COG:STM0616 KEGG:ns NR:ns ## COG: STM0616 COG0782 # Protein_GI_number: 16763993 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 136 1 136 136 219 83.0 8e-58 MSRPTIIINELDAERIDRLLEKPEFASLPVADALNEELDRAQMCTPETMPHDVVTMNSQV KFRNLTTGEELTRTLVYPAQMTDSSTQLSVLAPVGAALLGLRTGDTIHWELPGGASAHLE VLELLYQPEAAGDYLR >gi|333596726|gb|GL892086.1| GENE 1184 1255808 - 1257046 1306 412 aa, chain - ## HITS:1 COG:ECs0647 KEGG:ns NR:ns ## COG: ECs0647 COG1063 # Protein_GI_number: 15829901 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 757 88.0 0 MKALTYHGPHHVRVDNVPDPGIEQPDDIILRVTATAICGSDLHLYRGKIPKVQHGDIFGH EFMGEVVECGSEVKNVQKGDRVVIPFVIACGDCFFCQMQQYAACENTNRGQGAALNKKQI PAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPQLLSDDKALFLSDILPTAWQAAK NAQIQKGSSVAVFGAGPVGLLTIACARLLGAEQIFVIDHHPYRLRFAQERYGAIPINFDD DNDAAEKIIEQTAGQRGVDAVIDAVGFEAKGSTTETILSNLKIEGSSGKALRQCIAAVRR GGVVSVPGVYAGFIHGFLFGDAFDKGLSFKMGQTHVHAWLGELLPLIEKGLLTPEDIVTH YLPLADAERAYKIFEKREEECRKVILVPGADTPEAAQQKVKGLVNAFPGGVV >gi|333596726|gb|GL892086.1| GENE 1185 1257227 - 1257655 448 142 aa, chain + ## HITS:1 COG:STM0614 KEGG:ns NR:ns ## COG: STM0614 COG0589 # Protein_GI_number: 16763991 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 1 142 1 142 142 237 90.0 5e-63 MYQTIIMPVDVFEMELSDKAVRHAEFLAQQDGVIHLLHVLPGSASLSLHRFAADVRRFEE HLQHEAETRLQTMVGHFSIDPSRIKTHVRFGSVRDAVNELAGELNADVVVIGSRNPSITT HLLGSNASSVIRHTHIPVMVVR >gi|333596726|gb|GL892086.1| GENE 1186 1257715 - 1259280 413 521 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 213 515 2 303 306 163 32 2e-38 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKALLTEIAELSPKVTFKEDNTLAV RKPSFLIANPGSDQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQALLEQIRDIDGDFE FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITERNVMGVPAVYLNGQE FGQGRMTLTEIVAKVDTGAEKRAAEELNQRDAYDVLIVGSGPAGAAAAVYSARKGIRTGL MGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAAVEG GLHQIETASGAVLKARSVIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLTNVDIVLNAQTTEVKGD GSKVTGLEYRDRVSGDIHSVALAGIFVQIGLLPNTTWLEGAIERNRMGEIIIDAKCETSV KGVFAAGDCTTVPYKQIIIATGEGAKASLSSFDYLIRTKTA >gi|333596726|gb|GL892086.1| GENE 1187 1259467 - 1260030 708 187 aa, chain - ## HITS:1 COG:STM0608 KEGG:ns NR:ns ## COG: STM0608 COG0450 # Protein_GI_number: 16763985 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 379 98.0 1e-105 MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE LQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKVKAAQYVASHPGEVCPAKWKEGEATLAPS LDLVGKI >gi|333596726|gb|GL892086.1| GENE 1188 1260658 - 1261563 707 301 aa, chain + ## HITS:1 COG:STM0606 KEGG:ns NR:ns ## COG: STM0606 COG0583 # Protein_GI_number: 16763983 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 296 1 296 300 312 53.0 4e-85 MANLYDLKKFDLNLLVIFECIYQHLSISKAAETLYITPSAVSQSLQRLRGQLNDPLFIRS GKGITPTTVGVNLHHHLEQNLNHLEQTINMMHSSGLKKSFVIYCPQFMTPKIMLEPMQLL MDKYNYHIELHDVFLAPDSAEDLLAYRKADLVFAFSPLNSRSTACSLYYEMQFTLVCRKD HPRIGLNATPDELLRENFTAFLSDETSVKTYQENAEILLPERNIVFRSDSYISLLSMISF TDIIGLVPVPAFEQYGEALNLRRIETNLTFPSINIYMMYNRSALNSPAFSNFIDELVPPR S >gi|333596726|gb|GL892086.1| GENE 1189 1261532 - 1261639 65 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIFFKYHFNECYWENFWLPIKQPVIFSYGVEQVHQ >gi|333596726|gb|GL892086.1| GENE 1190 1261732 - 1262955 944 407 aa, chain + ## HITS:1 COG:ECs0641 KEGG:ns NR:ns ## COG: ECs0641 COG3969 # Protein_GI_number: 15829895 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 407 1 406 406 682 78.0 0 MSIYKIPLPQNVLSATEARIAWTLENIPRVCVSFSGGKDSTVMLHLTALRARQMKRKIDV LFIDWEAQFTYTIAHIEHMRSLYSDVIDHFWWVALPLTTQNSLSQFQPEWQCWEPDTQWV RQPPDDAITDPAFFPFYQPGMTFETFVRSFSDWFSLNRPAAMMIGIRADESYNRFLAIAS ARKQRFSDDKPWTTVAPGGHTWYIYPLYDWKTADIWTWFAKTKCCYNPLYDLMYKAGVPP RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCERASGVRSGGIYAGHDNHFYGHRKILKP DHLSWREYAMLLLDSMPQNTAEHYRNKIAIYLHWYQKRGMDDIPDTQEGDIGAKDIPSWR RICKVLLNNDYWCRALSFSPNKPKHYQRYNERVKAKRKEWGILCNNE >gi|333596726|gb|GL892086.1| GENE 1191 1262940 - 1263554 554 204 aa, chain + ## HITS:1 COG:STM0604 KEGG:ns NR:ns ## COG: STM0604 COG1475 # Protein_GI_number: 16763981 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 204 1 201 205 292 70.0 3e-79 MQQRIINEMEAYLQTLSEDERINAINAFRLALHHISPFRDQPIDCVLWVKQDDITANDYN PNNVAPPEKRLLTTSLELDGFTQPIVVTENAPQHYEIVDGFHRHDIGRHRAILKRQLKGY LPVTCLRKERQAKFDRMAATIRHNRARGRHQINAMAEIVRELALMGWSEEKIGKELGMDS DEVLRLKQINGLLELFADRRFSEA >gi|333596726|gb|GL892086.1| GENE 1192 1263567 - 1264727 1296 386 aa, chain - ## HITS:1 COG:ECs0639 KEGG:ns NR:ns ## COG: ECs0639 COG0436 # Protein_GI_number: 15829893 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 674 85.0 0 MSHNALIPQSKLPNLGTTIFTQMSALAQQHNAINLSQGFPDFDGPKYLQERLAYHVAQGA NQYAPMTGVQALREAIADKTAALYGHKPDANSDITVTAGATEALYAAITALVRTGDEVIC FDPSYDSYAPAIELAGGVVKRVALQPPHFRPDWQAFAALLSDKTRMVILNTPHNPSATVW QKRDFAALWQAIAEREIYVLSDEVYEHICFAKEGHASVLAHPQLRERAVAVSSFGKTYHM TGWKVGYCVAPAAISAELRKVHQYLTFAVNTPAQLALADMLGSEPGHYRELPDFYRARRD RFVNALSKSRLEILPCEGTYFLLADYSAISDLDDVSFCQWLTKEVGVAAIPLSVFCADPF PHKLIRLCFAKQESTLLAAAERLNKL >gi|333596726|gb|GL892086.1| GENE 1193 1264850 - 1265464 489 204 aa, chain + ## HITS:1 COG:PA1683 KEGG:ns NR:ns ## COG: PA1683 COG0235 # Protein_GI_number: 15596880 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pseudomonas aeruginosa # 1 203 1 205 205 185 47.0 4e-47 MTDNLQLTHLVEACRWIGAKGWAPATGGNMSVRQDEHLCWLSESGKDKGSLTPADFLQVE IATNRAPSGRKPSAETGLHTLIYRLFPEANAVLHVHTVNATVLSRLVNEAELKITGFEMQ KSLTGQTTHRDTVSIPVFDNDQDIDALASRIAHYAQERPLNYGFLLRGHGLTCWGRDVAE ARRHLEGLEFLFECEMRLRQWERV >gi|333596726|gb|GL892086.1| GENE 1194 1265461 - 1266150 852 229 aa, chain + ## HITS:1 COG:PA1685 KEGG:ns NR:ns ## COG: PA1685 COG4229 # Protein_GI_number: 15596882 # Func_class: C Energy production and conversion # Function: Predicted enolase-phosphatase # Organism: Pseudomonas aeruginosa # 2 209 3 212 249 215 54.0 7e-56 MIRAIVTDIEGTTSDIRFVHDVLFPYARERLAAFVTAQQYAEPVKSILDNLRDEISAPHA SVSDLINVLFTFMDEDRKSTALKALQGIIWQDGYVNGDFTGHLYPDVLPALEKWKAQGID LYVYSSGSVAAQKLLFGYSDEGDITHLFSGYFDTHIGAKREVQSYQNIAAQTGIAPSQIL FLSDIHQELDAAEQAGFRTLQLIRGEDDGASHHHQIHQFDEINPEQIPS >gi|333596726|gb|GL892086.1| GENE 1195 1266147 - 1266689 620 180 aa, chain + ## HITS:1 COG:PA1684 KEGG:ns NR:ns ## COG: PA1684 COG1791 # Protein_GI_number: 15596881 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Pseudomonas aeruginosa # 1 179 1 179 181 214 60.0 6e-56 MSALTIYSDKDARQHLWHSTDAAEIAQQLNAKGVRFERWAADRDLGHDPAPEAVIAAYQH AIDKLVAEKGYQSWDVISLRADNPQKAALRAKFLNEHTHGEDEVRFFVEGAGLFCLHIGD EVYQVLCEKNDLISVPAGTPHWFDMGSEPNFTAIRIFDNPEGWVAQFTGDAIADAYPRLA >gi|333596726|gb|GL892086.1| GENE 1196 1266960 - 1267976 1504 338 aa, chain - ## HITS:1 COG:TM0911 KEGG:ns NR:ns ## COG: TM0911 COG0182 # Protein_GI_number: 15643673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Thermotoga maritima # 4 329 3 331 343 271 47.0 1e-72 MQTLQTTSLRVADNQLFILDQQALPQEKRWLDASTVEALVGHIHALRVRGAPLIGLSASL LLALLAENGKSRDELAVALETLRASRPTAVNLMNNLDRMKLALWQEAFVPALVAEALRLI DEDKRLCDAIAQAGSALVKPGSRLLTHCNTGGLATAGVGTALGVIARAHQEGKVSNVWVD ETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAKGQVDAVWVGADRIAANGDVANKI GTYSLAVLAKFHGIPFYVAAPQTTLDPDCPNGDAIPIEQRAASEVTGVAGSFGAVQWAPE DAQVYNPAFDVTPASLISGWVLDTGVVTPDEVAAGKFA >gi|333596726|gb|GL892086.1| GENE 1197 1268079 - 1269278 1533 399 aa, chain + ## HITS:1 COG:BS_ykrT KEGG:ns NR:ns ## COG: BS_ykrT COG4857 # Protein_GI_number: 16078420 # Func_class: R General function prediction only # Function: Predicted kinase # Organism: Bacillus subtilis # 4 379 11 377 399 307 43.0 2e-83 MSQYRTFTAQDAVEYARQFGGLDDPSSLVEAQEIGDGNLNLVFKIFDSAGVSRIIVKQAL PYVRCVGESWPLTLDRARLEAQTLVEHYQHSPQHTVKIHHFDPELAVMVMEDLSSHRIWR GELINNIYYPQAARQLGEYLAHTLFHTSDFYLHPHEKKAQVAKFINPEMCEITEDLFFND PYQIHERNNYPAELENDVAALRDDAQLKIAVASLKHRFFSHAEALLHGDIHSGSIFVADG SLKAIDAEFGYFGPIGFDVGTAIGNLLLNFCGLPGHLGIRDAAAAREQRLTDIQELWNTF AERFQALANEKSRDAALSAPGYASVFLKKIWHDAIGFCGTELIRRSVGLSHVADIDTIQD EAMRHECLRHAITLGKALIVIAERIDSAEELVARVRQYS >gi|333596726|gb|GL892086.1| GENE 1198 1269331 - 1270572 1330 413 aa, chain - ## HITS:1 COG:YPO1516 KEGG:ns NR:ns ## COG: YPO1516 COG5276 # Protein_GI_number: 16121789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 4 413 8 418 418 727 84.0 0 MSQLPPPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSIVDVRDPKNPKA VGYVPAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRQVGETVSDVQGKGWS AGLRVFDISTPDRPREIGFLSLSGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADP RKPEVAGRWWLPGMNQAAGEKPTWPEGKRYALHHAIIAGDTAYGSWRDGGLTLLDVKDRN QPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPSNPV SIATFPQPDETDYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPV ETGALVPAAPERMMDTRPNRPQVIQSCDVFVDAQGIIYSTDYNGGMSVIEYLG >gi|333596726|gb|GL892086.1| GENE 1199 1270666 - 1271730 1577 354 aa, chain - ## HITS:1 COG:YPO1517 KEGG:ns NR:ns ## COG: YPO1517 COG1879 # Protein_GI_number: 16121790 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 353 6 361 363 559 82.0 1e-159 MKKIALSLVALGLLTALPGFAATPAPVPAAIANHDGPIRIAVIRNLGSDDNTTQFVAGAI QEGKKLGFKVSTFLSNGDDARFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIK VAVFDTAMNGEIPGVTVTQQDDASLTNLSFGQLAKDFNGKANIVKLWVAGFPPMERRQAA YKELQKQYPEIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYK ALKENGRTEIKLYSIDISNQDLQLMREPGSPWAVSVAVDPKLIGATNVRLIANKIAGEAT PATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFVAPWFATLAAKNK >gi|333596726|gb|GL892086.1| GENE 1200 1271750 - 1272670 1365 306 aa, chain - ## HITS:1 COG:YPO1553 KEGG:ns NR:ns ## COG: YPO1553 COG1172 # Protein_GI_number: 16121826 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 306 26 331 331 405 83.0 1e-113 MLLTVVALVAVFGLASDSFLDPNNILNILRAIAIVTVIAVGVSISLTVGGFDLSVGSTAS LANALVISLFVWHGFGTTESILITLALCTLVGLFNAFLIVILRIPDMLATLASLFVIQGV AMTYSYGGSITENMVLPSGDMAEGTIPAAFSLLGQVPTIVIIMLAVTLLAQLGLSLTTHG RRMYAIGGNPEAARLSGIRTTRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAVALAI TYIQKR >gi|333596726|gb|GL892086.1| GENE 1201 1272742 - 1274244 1711 500 aa, chain - ## HITS:1 COG:VCA0128 KEGG:ns NR:ns ## COG: VCA0128 COG1129 # Protein_GI_number: 15600899 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Vibrio cholerae # 1 496 1 493 500 343 39.0 6e-94 MVSSRLEMRGISLAFSGFQALSRVNFTLTGGSVHALTGANGAGKSTLMAVLCGTHDRYEG EICINNQPVSLREPLDAKRLGIHLVQQEVDVALIPGLSIAENIMLDQLAQPGHRYRWRTV RQQARQALAQLDVSLDVRRAIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDAHESE RLFAVVRRLKDQGIGVVFISHRIHELKAICDTLTVLRDGKMIESGPMVDLSGEAIVEKML GHVLSDIYPPARPPHGDETLLRVEGLHDDALLKDISLHLRKGEILGIAGLAGAGKTELCK ALFGASKSRVERGELNQLAWTPRDPADSVLRGLALVPEERRKEGIFIDETVSMNLAVCAD NSFSRWSLFGHRQAWRWAEEIIARVGVRTRGPGQVLLRLSGGNQQKIAIGKWLRNDASVL IFDEPTKGVDVKAKTDLFQLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI PGAEAREETLLYYSTGGTAS >gi|333596726|gb|GL892086.1| GENE 1202 1274404 - 1275492 1451 362 aa, chain + ## HITS:1 COG:STM0602 KEGG:ns NR:ns ## COG: STM0602 COG0371 # Protein_GI_number: 16763979 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 361 1 361 362 556 80.0 1e-158 MSNTDIRVVPGPANYFSHCGSLAQLDDFFTPEQLSRAVWIYGERAIEGARPYLPESFNAP GAKHLLFKGHCSERDVTHLVNESGREASVVIGVGGGAVMDTVKAVARRLGVPFVGIPTIA ATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPQIILNAPAEYLLAGIGDTLAKWYE AVVLAPEPENLPLTVRLGLNGALAIRDVLLARSEEALADQQRGEQTQAFRDVVDAIIAGG GMVGGLGERYTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLVA AYRRFNLPTTLRALDVDINNRDELDQVIAHTLRPVESIHYLPVALTPDVLRAAFEKVESF RR >gi|333596726|gb|GL892086.1| GENE 1203 1275550 - 1276293 226 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 243 4 238 242 91 30 1e-16 MQIDLTGKKALVTGASRGLGRAIALSLARAGADVVITYEKSVDKAQQVVDEINALGRHGE AIQADSASAQAIQDAVTQAARSLGGLDILVNNAGIARGGPLESMTLADIDALINVNIRGV VIAIQEALVHMSDGGRIINIGSCLANRVAQPGIAVYSMTKSALNSLTRGLARDLGPRGIT VNLVHPGPTNSDMNPEDGEQADSQRQLIALGHYGQPEDVAAAVTFLASPAAGQISGTGLD VDGGLNA >gi|333596726|gb|GL892086.1| GENE 1204 1276477 - 1276782 88 101 aa, chain + ## HITS:1 COG:YPO0884 KEGG:ns NR:ns ## COG: YPO0884 COG2026 # Protein_GI_number: 16121191 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Yersinia pestis # 1 85 2 86 86 62 38.0 2e-10 MKIVWSNGAKKAFSKIDERYQHRIEVKLSELDDRSAPRPDIKKISATEDHFRLRVGDYRI IYTLRDDPDDHCYVLAVKRRTSTTYLHEESANYGCTANQGR >gi|333596726|gb|GL892086.1| GENE 1205 1276754 - 1277158 555 134 aa, chain + ## HITS:1 COG:YPO0883 KEGG:ns NR:ns ## COG: YPO0883 COG1396 # Protein_GI_number: 16121190 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 3 128 4 120 120 110 52.0 8e-25 MAVQLIKDDNGKTQYVVIPYHEYFRMLLQMAEIDDETDDDLEDIEVEHDSLDDVELPGEV CSIMTWQKVSLQAAWRILRGMSQQEVAEKLGITQSAVSQLEALDSRPQKRTREKLAAIYG CKQEQISLYLPKEG >gi|333596726|gb|GL892086.1| GENE 1206 1277155 - 1277352 268 65 aa, chain - ## HITS:1 COG:STM0601 KEGG:ns NR:ns ## COG: STM0601 COG2879 # Protein_GI_number: 16763978 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Salmonella typhimurium LT2 # 1 65 1 65 65 125 93.0 2e-29 MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRVNHPDQTPMTYEEFFRDRQDARYGGKG GAKCC >gi|333596726|gb|GL892086.1| GENE 1207 1277467 - 1279572 2983 701 aa, chain - ## HITS:1 COG:ECs0637 KEGG:ns NR:ns ## COG: ECs0637 COG1966 # Protein_GI_number: 15829891 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 701 1 701 701 1222 94.0 0 MNNSGKYLTWAVLSVVGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGRYIAKTV LGVDGTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWI LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGATAGVIALVATFMIMVIILAVLAM IVVKALTHSPWGTYTVAFTIPLALFMGIYIRYLRPGRIGEVSVIGLVFLVFAIISGGWVA ESPTWAPFFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILI MRPTLTMPALTKFIDGTGPVWTGNLFPFLFITIACGAVSGFHALIASGTTPKMLANENQA CLIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTVDVVASAAQVVSGWG FAITPETLTHIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGLMDVSFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVISPNLKRTDSLPANLLATALCVLAWGYFLHQGVVDP LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK AFSPDNKVGFLAIANKFQAMIDSGKIPSQYTESQLSQLVFNNRLDAGLTIFFMVVVVVLA LYSLKTALAALKVDKPTAKETPYEPMPENLDEIVTQAKGAH >gi|333596726|gb|GL892086.1| GENE 1208 1279722 - 1280078 384 118 aa, chain - ## HITS:1 COG:ECs0636 KEGG:ns NR:ns ## COG: ECs0636 COG2050 # Protein_GI_number: 15829890 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli O157:H7 # 1 118 20 137 137 213 90.0 1e-55 MVGHLGIVYTRLGDDTLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGFLMTRDGQN VVGTELNATHHRAVSHGKVRGVCQPLHLGRSSQSWEIVVFDEQGRRCCTCRLSTMVLG >gi|333596726|gb|GL892086.1| GENE 1209 1280135 - 1280890 191 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 245 4 238 242 78 26 1e-12 MAGFDFTGKTVWVTGAGKGIGYATALAFVEAGAQVTGFDLAFPQGDYPFATETLDVADAA QVSDVCGRLLSTLERLDVLVNAAGILRMGATDQLSQEDWQQTFAVNVGGAFNLFQQTMGQ FRRQQGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALTVGLELAGSGVRCNLVSPGST DTDMQRTLWTSNDAEQQRIRGFGEQFKLGIPLGKIARPQEIASTVLFLASDAASHITLQD IVIDGGSTLGA >gi|333596726|gb|GL892086.1| GENE 1210 1280890 - 1281744 1200 284 aa, chain - ## HITS:1 COG:STM0597_1 KEGG:ns NR:ns ## COG: STM0597_1 COG1535 # Protein_GI_number: 16763974 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Salmonella typhimurium LT2 # 1 214 1 215 215 382 85.0 1e-106 MAIPKLTAYALPTAAELPTNKVNWAFEPERAALLIHDMQEYFLNFWGENSDMMQQVVANI ARLRAYCKEHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQRIVEELTPDEADTV LVKWRYSAFHRSPLEQMLKETGRNQLLITGVYAHIGCMTTATDAFMRDIKPFFIADALAD FTRDEHLMSLKYVAGRSGRVVMTDELLPSVPATKAALRELILPLLDESDEPMDDENLIDF GLDSVRMMALAARWRKVHGDIDFVMLAKNPTLDAWWALLSREVK >gi|333596726|gb|GL892086.1| GENE 1211 1281755 - 1283365 1906 536 aa, chain - ## HITS:1 COG:ECs0633 KEGG:ns NR:ns ## COG: ECs0633 COG1021 # Protein_GI_number: 15829887 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Escherichia coli O157:H7 # 1 534 1 534 536 892 80.0 0 MTIPFTRWPEEFARRYREKGYWQDRPLTHILTDHADSDAVAIIDGDRRITYRAFHQSVNN LASALQAQGLHRGETALVQLGNVAEFYITFFALLQIGVAPVNALFSHQRSELNAYALQIK PAVLIADRDHALFAGDDFLNTFVDAHRSVRVVLLRGDKGEHALEAAIARPADNFIPNPTP ADEVAFFQLSGGSTGTPKLIPRTHNDYDYSIRRSNEICGITAHTRYLNALPAAHNYAMSS PGSLGVFTAGGCVVLANDPSATLCFPLIEQHQINVTSLVPPAVSLWLQAIADGAGNAQLK SLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTALDDAPERIINTQGRPMC PDDEVWVADEDGNPLPRGEVGRLMTRGPYTFRGYFNSPEHNASAFDADGFYCSGDLIAID EQGYITVQGREKDQINRGGEKIAAEEIENLLLRHEAVNHAALVSMEDSLLGEKSCAYLVV KQPLRAVEVRRFLREQGVAEFKLPDRVESVDALPLTPVGKVDKKQLRLWLAERARG >gi|333596726|gb|GL892086.1| GENE 1212 1283375 - 1284550 1289 391 aa, chain - ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 606 79.0 1e-173 MDTSLAEEVQHTATTLQSDSFFFMSPYRSFTTSGCFARFSEPAVGGDDPAGPFQQKLAQA FRKAKASGIAHPVMVGAIPFDTRKPSSLYIPQRWQTFSRPARQQSARYASGAQTLNVQQR TEIPPQPVFEEMVARAASLTATPQVNKVVLSRLIDIATDKKIDSSALMERLIAQNPASFN FHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDVLDREAGTKLLASEKDRH EHDLVTQAMKTLLQPRSHHLSMPSSPQLITTPTLWHLATPVEGDARENENALTLACLLHP TPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLHQNTVRLFA GAGIVPASSPVGEWRETGVKLSTMLNVFGLH >gi|333596726|gb|GL892086.1| GENE 1213 1284615 - 1284884 60 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVGLLSSVYTPRLSVTWRGQSAATAEVSPKTKSPVRRRALRQTAGSFTERHPVFIEDNA SHFHGCGEGMQAFVAQVNCPMVDSGAMWD >gi|333596726|gb|GL892086.1| GENE 1214 1284739 - 1285698 876 319 aa, chain + ## HITS:1 COG:ECs0631 KEGG:ns NR:ns ## COG: ECs0631 COG4592 # Protein_GI_number: 15829885 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe2+-enterobactin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 496 81.0 1e-140 MKLPAVCRNALLLTGLFVLGLTSAVAADWPRQVTDSRGVYTLESKPTRIVSTSVTLTGSL LAIDAPVIASGATTPNNRVADAQGFLRQWGDIAKQRNVARLYIGEPSAEAVAAQMPDLIL ISATGGDSALALYDQLSAIAPTLIINYDDKSWQELLTQLGTITGHEKQAAERIAAFDKQL AQVKQQMKLPPQPVNAIVYTAAAHTANLWTAESAQGKLLHQLGFTLADLPAGLHTSKSQG KRHDIIQLGGENLATGLNGEGLFVFAGDQKDVDAIYANPLLAHLPSVKNKRVWALGTETF RLDYYSAMLVLQRLNSIFK >gi|333596726|gb|GL892086.1| GENE 1215 1285776 - 1287002 1663 408 aa, chain - ## HITS:1 COG:STM0593 KEGG:ns NR:ns ## COG: STM0593 COG0477 # Protein_GI_number: 16763970 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 406 1 406 414 512 82.0 1e-145 MNQKSWLLNLSLLKTHPAYRAVFIARFISILSLGLLGVAVPVQIQSMTHSSWLVGLSVTL TGGAMFIGLMVGGVLADRYERKKLILLARGTCGVGFIGLCLNAMLPEPSLIAIYALGLWD GFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYG LAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMAS AVRVLYPALAGEWQMSASEIGVLYAAIPLGAAFGALTSGNLAQSARPGLIMLVATLASFI AIGFFSLMPVWALGVMCLVIFGWLSAVSSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGD AIGAAILGGLGAIMTPVASASSSGFVLAVVGVILLAVLAELRRFRQPL >gi|333596726|gb|GL892086.1| GENE 1216 1287099 - 1288115 1226 338 aa, chain + ## HITS:1 COG:ECs0629 KEGG:ns NR:ns ## COG: ECs0629 COG0609 # Protein_GI_number: 15829883 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 5 338 1 334 334 396 86.0 1e-110 MDVAMSFSSSAVRAVAVPALLLLLILAIALSLLVGAKPLPASVIVDALSGTCQSADCTIV LDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNSGASFAIVLGAALFGLTS PSEQLVMAFCGALAASLVVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDV YDQLRFWQAGSLDIRTLETLNVVVIPVIIAAAVALFLSRSLNSLSLGSDTATALGNRVAR TQLTGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFA DVLGRLLVPGELRVSVVSAFIGAPVLIFLVRRRPGGSA >gi|333596726|gb|GL892086.1| GENE 1217 1288112 - 1289104 1242 330 aa, chain + ## HITS:1 COG:fepG KEGG:ns NR:ns ## COG: fepG COG4779 # Protein_GI_number: 16128572 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli K12 # 1 330 1 330 330 392 82.0 1e-109 MMAPSRRLLTSVSLLVVASLLLAVWSLQSGAVTLDFSQVFNALIGSAPRNITMVVTEWRL PRVAMAILVGAALGVSGAIFQSLMRNPLGSPDVMGLNTGAWSGVLVAMVLFGQHLTAITF TAMAGGILTSLLIWALAWRNGIDTFRLIIIGIGIRAMLMAFNTWLLLQASLETALSAGLW YAGSLNGLTWGKTWPAAPLILLMFIGALLLVRRMRLLEMGDDSACALGVSVERSRLLLML VAVLLTAASTAIAGPISFIALVAPHIARRLSGTARWVLTQAALCGALLLLAADLCAQRLF MPYQLPVGVVTVSLGGIYLIVLLVQESRKK >gi|333596726|gb|GL892086.1| GENE 1218 1289101 - 1289895 187 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 8 241 9 236 309 76 25 4e-12 MTDSTTRLRGENLTLGYGKKIIARDLSVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPV EGSVYLDGEQIQRFASKEVARRIGLLAQNATTPGDITVQELVSRGRYPHQPLFTRWRKED DEAVKRAMQATGITDLAQQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI DLLELLSELNRTQGYTLAAVLHDLNQACRYATHLIALRDGEIVAQGAPKEIVTPDLIAQI YGMRCMIIEDPVAGTPLVVPLGRR >gi|333596726|gb|GL892086.1| GENE 1219 1289978 - 1293835 4473 1285 aa, chain - ## HITS:1 COG:STM0588_1 KEGG:ns NR:ns ## COG: STM0588_1 COG1020 # Protein_GI_number: 16763965 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Salmonella typhimurium LT2 # 3 1055 4 1061 1061 1580 76.0 0 MNRLPLVAAQPGIWMAEQLSSLPNAWSVAHYTELKGAVDAPLLAKAIAEGMMQADTLRMR FTEDNGEVWQWVDEAMILPEPSIVRVDSHDAAVALMEADLNQNLRVDSGQPLAFHQLIQV GESHWYWYQRYHHLVVDGFSFPAITRQIAAIYAAWIKGEPTPVSPFTPFAEVVEEYQRYR DSEAYLRDGAFWAEQRRQLPSPVSLSSAPLPGRAATTDILRLKIAIDARAFSQIAQAAGQ VQRTDLVLALVALWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPLAVNINPQES LPELALRLANQLKKMRRHQRYDAEQIVRDSGKAAGDEALFGPVLNVKVFDYQLDLDGVEA ITHTLATGPVNDLELALFPDEQGGLSIEILANKQRYDEATLKRHAARLDAMLTQFAANPD LRCGEVETVSEQEYTQLARINDTGLALPSTTLADLVAEQAGKTPDAPALADARIELSYRQ MREQVVALANLLRERGVKPGDSVAVALPRSMFLTLALHGIVEAGAAWLPLDTGYPDDRLR MMLEDAKPSLLITTDEQLPRFSDLPIPAFSYNMLLPTTDAEPLRLAKPEQTAYIIFTSGS TGRPKGVMVGHTAIVNRLKWMQDHYPLAAHDVVAQKTPCSFDVSVWEFWWPFIAGAKLVM AEPDAHRDPQAMQRFFAEYGVTTTHFVPSMLAAFVASLTPENVDCCNTLKQVFCSGEALP TALCREWEQLTHVPLHNLYGPTEAAVDVSWYPAFGPELAAVEGNSVPIGFPVWNTGLRIL DAMMRPVPFGVAGDLYLTGIQLAQGYLDRPDLTASRFIADPFVPGERMYRTGDVARWLDN GAVEYLGRSDDQLKIRGQRIELGEIDRAMLALPDVAQAVAHACVFNQAAATGGDARQLVG YVVSESGLPLDRDALLESLKARLPPHMVPVVVLQISALPLSANGKLDRKALPLPELTSKT SGRAPETETEVAVAQAFSLLLGCAVNDIEADFFALGGHSLLAMRLAAQLSRAFNRKVTPG QVMVASTVSKLSALLDSQMSDEQAQRLGYETLLPLRESSGPTLFCFHPASGFAWQFSVLA RYLSPRWSIVGIQSPRPDGPMQQCADLDGVIEHHLATLCKQQPQGPYYLFGYSLGGTLAQ GIAARLREQGEAVAFLGLLDTWPPETQNWSEKEANGLDPEVLAEIERERQAFIAAQQGQG SGELFNAIEGNYADAVRLLTTAHSARFNGKATLFVAERTRTMDPHVAWSPWVSELEVYSQ DCAHVDIISPQAFEKIGPVLKEILG >gi|333596726|gb|GL892086.1| GENE 1220 1293832 - 1294044 256 70 aa, chain - ## HITS:1 COG:STM0587 KEGG:ns NR:ns ## COG: STM0587 COG3251 # Protein_GI_number: 16763964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 69 1 69 72 89 69.0 1e-18 MEFSNPFDNPQGQFAILQNDHGQYSLWPQQCGLPAGWRVVCEPQSQEACQQWLAEYWQTL EPSYFAGERA >gi|333596726|gb|GL892086.1| GENE 1221 1294055 - 1295383 984 442 aa, chain - ## HITS:1 COG:STM0586 KEGG:ns NR:ns ## COG: STM0586 COG2382 # Protein_GI_number: 16763963 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Salmonella typhimurium LT2 # 46 441 4 401 404 558 70.0 1e-159 MVIYERASHSAGITLLQMQIVINNIINKICSETKKTVKHGVIRVTALTTGSEAWWQAKNG PEWERHQDNYRVTFWWRDPAGTQKTSTVKRVWLYVTGVTDHHQNARPQSLERIPDTDVWQ WQGEFSPEWRGSYCFIPSDNENDFADAVFDGAQPDRMALREGWRKLLPHAISDPLNAQSW RGGRGHAVSALEMPDAPVQPGWNHPDAPYKKPVCIEWHSARLKNRRRVWIFTTGDDRPDR PLAVLLDGQFWAESMPVWPALASLTRDGKLPPAVYVLIDVIDTAHRSRELPCNPDFWLAV QDELLPQVNNIAPFSDRPDRTVVAGQSFGGLSSLYAGLNWPQRFGCILSQSGSYWWPHRG APQDGLLIEQLKAGEKTARGLRIVLEAGRNEPLILRANQAILAELHTQQPVFWRQVDGGH DALCWRGGLTQGLMTLWQPLIH >gi|333596726|gb|GL892086.1| GENE 1222 1295400 - 1297640 3083 746 aa, chain + ## HITS:1 COG:STM0585 KEGG:ns NR:ns ## COG: STM0585 COG4771 # Protein_GI_number: 16763962 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 1 746 1 751 751 1218 83.0 0 MNKKIHSLALLVNLGIYGVALPAMADDNTASAQHEDTMVITAAEQNLQAPGVSTITADEI RKNPPARDVAEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNS IRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGS WNTYLNAPEHKDEGSTKRTNFSLSGPLGGDFSFRMFGNLDKTQADAWDINQGHQSERTGA YANTLPAGREGVENKDINGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNALVKK NYGKETNRIYRQNFAVTWNGGWDNGITTSNWAQYEHTRNSRLGEGLAGGTEGLFNSNKFT DTDLADVMLHSEINLPIDFIVNQNLTLGTEWNQQRMKDSTSFSQTQQGGTIPGMSEDRSP YTSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIA RAYKAPSLYQTNPNYLLYSKGQGCYASSDGVGCYMMGNDDLKAETSINKEIGLEWKRDGW LAGVTWFRNDYRNKIEAGYAPIGQTSTSKVTTDIYQWENVPKAVVEGLEGSLNVPVSDTI NWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVRQDVSLQSTFTWYGKQQPKKYNY KGQPVTGSEKDEVSPYSIVGLSATWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNATTG AYMYGAGAYTYNEPGRTWYMSVNTRF >gi|333596726|gb|GL892086.1| GENE 1223 1297698 - 1298372 573 224 aa, chain + ## HITS:1 COG:entD KEGG:ns NR:ns ## COG: entD COG2977 # Protein_GI_number: 16128566 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Escherichia coli K12 # 1 215 4 208 209 172 45.0 6e-43 MHTTHSTFSLAGHTLHRITFDPATFTDADLLWLPHHALLADAGRKRKADHLAGRIAAAHA LNDRPVPGIGPSGEPLWPEDVSGSITHSGTQAMAVVVRDRQALIGIDCEAILPEYEAREI KDGIVDAQEERVLTRTEYPFALALTLAFSAKESLFKALFPRVKSYMGFDCARVTMLDDST LTLALTRPLADYTEGATFTLHWQLHGEQAITLLSHAPADGPSRW >gi|333596726|gb|GL892086.1| GENE 1224 1298326 - 1299165 1213 279 aa, chain - ## HITS:1 COG:STM2864 KEGG:ns NR:ns ## COG: STM2864 COG1108 # Protein_GI_number: 16766170 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 2 276 3 277 282 338 72.0 5e-93 MMTLLLEPFQFAFMNNALLISLLVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWM MGLPLALGAFVAGLFCAVATGYLKDNSRIKQDTVMGIVFSGMFGAGLILYIAVKPEVHLD HILFGDMLGINGMDILQSGLVAGLIALVIGLKWRDFLLFCFDYQQAQASGLRTRWLHYGL LCMVSLTIVATLKAVGIILSISLLIAPGAVAVLITRRFHMALLVAVAVSAIVSVSGVYAS FYLDSAPAPTIVVLFAAVFIVTFAVTSVKARRQERVTTG >gi|333596726|gb|GL892086.1| GENE 1225 1299162 - 1300010 1101 282 aa, chain - ## HITS:1 COG:STM2863 KEGG:ns NR:ns ## COG: STM2863 COG1108 # Protein_GI_number: 16766169 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 278 1 278 286 439 89.0 1e-123 MNALLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYML GLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQT IVLGNILAIAPEDIVQLAIIGVVSMVILLLKWKDLMVTFFDENHARAIGLRPERLKILFF TLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVAIGSITSFLGAWASY YLDGATGGIIVVAQTLLFLLAFVFAPKHGLLASRRRAREAHP >gi|333596726|gb|GL892086.1| GENE 1226 1300007 - 1300813 276 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 236 1 232 311 110 28 2e-22 MHKGIVVSDVTVTYRNGHTALRDASFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRAASG TISILGLPPHRALRQNLVAYVPQSEEVNWSFPVLVEDVVMMGRYGHMGFLRRPRDRDKQI VTDALKRVDMLGLRHRQIGELSGGQKKRVFLARAIAQQGEVILLDEPFTGVDVKTEARII SLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTDTTFTAENLERAFSGVL RHVVLSGSEDRIITDDERPFVTHRQEAK >gi|333596726|gb|GL892086.1| GENE 1227 1300816 - 1301727 1192 303 aa, chain - ## HITS:1 COG:STM2861 KEGG:ns NR:ns ## COG: STM2861 COG0803 # Protein_GI_number: 16766167 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 7 302 7 302 305 469 77.0 1e-132 MHPRQGLKRLLLGALLMTATTTGALAAEKFQVITTFTVIADMAKNVAGDAADVTSITKPG AEIHEYQPTPGDIKRAQKAQLILANGMNLELWFQRFYQHLNGVPEVIVTKGITPMGISEG PYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPANAQTYQRNAEAYKQTITATLEPLRKQ VAAIPEDKRWMVTSEGAFSYLARDLGMKELYLWPINADQQGTPQQVRKVIDLVKKHHIPA VFSESTVSDKPARQVARETGAHYGGVLYVDSLSAENGPVPTYIDLLNVTTRTLVQGIRDG MKE >gi|333596726|gb|GL892086.1| GENE 1228 1301963 - 1303996 2521 677 aa, chain - ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 1 676 1 676 677 1285 95.0 0 MTDLSQDREKDKINPVVFYTSAGLILLFSLTTIFFRDFSAEWIGHTLNWVSKTFGWYYLL AATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQ YMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYP IFGKKINGPIGHTVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIAL SVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFM GMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFT FTLLWLSIFGNSALHEIIHGNATFAQEAMAHPERGFYSLLAQYPAFTFSASVATITGLLF YVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVI MGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPLGAQDRLSWKKRLSRLMNYPGT RYTSQMMETVCFPAMEEVAQELKLRGAYVELKNLPPEEGETLGHLDLLVHMGDEQNFVYQ IWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNF IHLHREAPGNSVMFPDV >gi|333596726|gb|GL892086.1| GENE 1229 1304125 - 1304712 660 195 aa, chain + ## HITS:1 COG:betI KEGG:ns NR:ns ## COG: betI COG1309 # Protein_GI_number: 16128298 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 195 1 195 195 338 92.0 3e-93 MPKVGMQPIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEAT MRDITGQLRDAVLSRLRALPDGSAEQRLQAIVGGNFDETQVSGAAMKAWLAFWASSMHQP MLYRLQQVSSRRLLSNLVYEFRRELPREQAEEAGYGLAALIDGLWLRAALSGKPLDKTLA QSLTSHFISQHLPTD >gi|333596726|gb|GL892086.1| GENE 1230 1304726 - 1306198 1816 490 aa, chain + ## HITS:1 COG:betB KEGG:ns NR:ns ## COG: betB COG1012 # Protein_GI_number: 16128297 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 490 1 490 490 899 93.0 0 MSRMAEQQLYINGGYTSATSGRTFETINPANGEVLASVQAAGREDVDRAVESAKRGQKIW AAMTAMDRSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLI PALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV TPLTALKLAEIYTEAGVPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMAN SAASSLKEVTMELGGKSPLIIFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKSKA AFEQKIVERVGRIRAGDLFDENTNFGPMVSFPHRDSVMRYIAKGKEEGARVLCGGDVLKG DGFDNGAWVAPTVFTDCTDEMTIVREEIFGPVMSILTYESDEEAIRRANDTDYGLAAGIV SADLNRAHGAIHQLEAGICWINTWGESAAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ VEMGKFQSIF >gi|333596726|gb|GL892086.1| GENE 1231 1306212 - 1307876 2053 554 aa, chain + ## HITS:1 COG:ECs0357 KEGG:ns NR:ns ## COG: ECs0357 COG2303 # Protein_GI_number: 15829611 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Escherichia coli O157:H7 # 1 553 1 553 562 1115 94.0 0 MHFDYIIIGAGSAGNILATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYVRGNAMDLDNWAKEPGLEHWSYLN CLPYYRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDLNGYQ QEGFGPMDRTVTPQGRRASTARGYLDQAKPRPNLTIRTHAMTDHIIFDGKRAVGVEWLEG ESTIPSKATANKEVLLCAGAIASPQILQRSGVGNAELLKQFDIPLVHDLPGVGENLQDHL EMYLQYECKEPISLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFEWPNI QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD WQEFRDAIRITREIMHQPALDKYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKM GYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKVADAIRGRAPLAKS TAAYYVADGAPVRR >gi|333596726|gb|GL892086.1| GENE 1232 1308028 - 1308726 443 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238793360|ref|ZP_04636986.1| Acetyltransferase, including N-acetylase of ribosomal protein [Yersinia intermedia ATCC 29909] # 3 230 3 231 237 175 40 8e-42 MPEINQHGQTVNDIVPDWKCARALTRTPLTGQYCRLEPLDADRHSADLYEAYALGDDSDW TWLASTQPMSVEATAHWVLGKVLDDDLVPFAVIDLRTEKAVGLVCYMAIERFQGSVEIGH VTWSRRMKGTRVGTEAVWLLLKNAFEHKYRRLEWKCDSMNIASRNAAERLGFVWEGRLRQ KLVRKGRNRDSDMLSIIDREWPQRDAELRAWLAAENFDGEGRQIKRLEAFRQ >gi|333596726|gb|GL892086.1| GENE 1233 1308834 - 1309307 597 157 aa, chain - ## HITS:1 COG:no KEGG:ECL_03124 NR:ns ## KEGG: ECL_03124 # Name: not_defined # Def: cold-shock DNA-binding domain protein # Organism: E.cloacae # Pathway: not_defined # 1 157 1 157 157 272 96.0 3e-72 MNGTITTWFKDKGFGFIKDENGDNRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAYAV KVIPESKHLYIAGERVKLTSIKSFVVFSEEEPVDTKIDKENAVLSVGLLMNSIKPKTEKK PGEMRTVKKLAITTFQNTTMIFTEDEIDIDATVKLLK >gi|333596726|gb|GL892086.1| GENE 1234 1309444 - 1310214 1098 256 aa, chain - ## HITS:1 COG:L118271 KEGG:ns NR:ns ## COG: L118271 COG1028 # Protein_GI_number: 15672880 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Lactococcus lactis # 1 256 1 253 253 297 62.0 1e-80 MQKVALVTGSGQGIGKAIALRLVKDGFAVAIADYNEETAKTVADEITRNGGKAVAVKVDV SDRDQVFAAVEKARTALGGFNVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQA AIDAFRKEGHGGKIINACSQAGHTGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNAY CPGIVKTPMWAEIDRQVSEAAGKPLGYGTETFAKRITLGRLSEPEDVAACVSYLAGPDSD YMTGQSLLIDGGMVFN >gi|333596726|gb|GL892086.1| GENE 1235 1310235 - 1311914 1997 559 aa, chain - ## HITS:1 COG:VC1590 KEGG:ns NR:ns ## COG: VC1590 COG0028 # Protein_GI_number: 15641598 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Vibrio cholerae # 13 550 10 547 567 620 56.0 1e-177 MNSEKQSRQWAHGADMVVGQLEAQGVKQVFGIPGAKIDKVFDSLLDSSIEIIPVRHEANA AFMAAAVGRLTGKAGVALVTSGPGCSNLITGIATANSEGDPVVALGGAVKRADKAKLVHQ SMDTVAMFSPVTKYAVEVNSPDAIAEVVSNAFRAAEQGRPGGAFVSLPQDIVDQPTTGAI LPASGPALMGPAPESAINDVAKLIDKAKNPVILLGLMASQPANSAALRKLLEKSRIPVTS TYQAAGAVNQEHFTRFAGRVGLFNNQAGDRLLHLADLIICIGYSPVEYEPSMWNSGDATL VHIDVLPAYEERKYVPDLELVGDIAATLNLLASRIEHKLELSQRASEILVDRQHQRDLLD RRGASLNQFALHPLRIVRAMQDIMNNDVTLTVDMGSFHIWIARYLYSFRARQVMISNGQQ TMGVALPWAIGAWLVNPGRKVVSVSGDGGFLQSSMELETAVRLNANVLHIIWVDNAYNMV AIQEEKKYQRLSGVEFGPVDFKAYADAFGAKGFAVESADALEPTLRAAMDVDGPAVVAIP VDYSDNPLLMGQLHLSQIL >gi|333596726|gb|GL892086.1| GENE 1236 1311928 - 1312710 889 260 aa, chain - ## HITS:1 COG:VC1589 KEGG:ns NR:ns ## COG: VC1589 COG3527 # Protein_GI_number: 15641597 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Vibrio cholerae # 5 259 6 260 261 296 55.0 2e-80 MMMHSSACDCEASLCETLRGFSAQHPDSVIYQTSLMSALLSGVYEGETTIADLLAHGDFG LGTFNELDGEMIAFSSQVYQLRADGSARAAKPEQKTPFAVMTWFQPQYRKTFDGPVSRQQ IHDVIDQQIPSDNLFCALRIDGNFRHAHTRTVPRQTPPYRAMTDVLDDQPVFRFNQREGV LVGFRTPQHMQGINVAGYHEHFITDDRQGGGHLLDYQLENGVLTFGEIHKLMIDLPADSA FLQANLHPSNLDAAIRAVEN >gi|333596726|gb|GL892086.1| GENE 1237 1312813 - 1313694 731 293 aa, chain + ## HITS:1 COG:STM3121 KEGG:ns NR:ns ## COG: STM3121 COG0583 # Protein_GI_number: 16766421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 292 214 42.0 1e-55 MELRYLRYFVAVARERHFTRAAKALGISQPPLSQQIKRLEEEVGTPLFRRLTRGVELTEA GEAFYEDACKILALSDAALEKARGIARGLNGNLSIGITSSDAFHPKIFALIRQFQVQNMA VQVHQVEANMSSLTTMLAEGELDIAFVCLPCESSKVFELKIIDREPMVLALHRDHPLAAC GDLELDALRDTPVVLFPQEVAPGLYDRVYGSCERAGIDMQHTLQSSQLSSSLSMVSAGGG FALVPKSMAAISPPNVTYHALRSPELYTDIALCWRRFERSRTVKRFLAMMSEG >gi|333596726|gb|GL892086.1| GENE 1238 1313981 - 1314436 436 151 aa, chain + ## HITS:1 COG:no KEGG:ECL_02210 NR:ns ## KEGG: ECL_02210 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 151 1 151 151 182 61.0 4e-45 MVTTPGFSYVRAEESAVHHLLHLQLPDSADLFELADTCAAYVSVLVETDDAVTFATLCKQ LLAALKRLRECCDAELPSYLVEQLIAGEKIASCMSDCWQDTALQVDYAVALTLAVMGGTL PANVAKELIGLLHDMVWLLAEFVKEPYITAH >gi|333596726|gb|GL892086.1| GENE 1239 1314648 - 1315025 175 125 aa, chain - ## HITS:1 COG:no KEGG:Rahaq_2697 NR:ns ## KEGG: Rahaq_2697 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 125 125 249 249 207 88.0 1e-52 MRDGLIDYGKNINQIDVNPERSIIEYLFKNKKDLFKHYFSTFNNPNFNHSIRIWHQSNDN AWVDWAEKNSICININPYKIREGFFLVGFDYFDITNNESLHIASNKDGYEYFNKQLGNSS YVWMR >gi|333596726|gb|GL892086.1| GENE 1240 1315861 - 1316280 489 139 aa, chain + ## HITS:1 COG:ygjM KEGG:ns NR:ns ## COG: ygjM COG5499 # Protein_GI_number: 16130977 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Escherichia coli K12 # 4 137 5 137 138 130 49.0 6e-31 MNYAAAIKAANALTNELPFLGSTPSRQDYEDALALVEYLIEHDPDNPLVDMLTAKIDKYE NESPEFAEFNARIASIPSGVALLRTLMDQYQLTQSDFENEIGKKSLVSRILNGQRTLTLD HMRALAKRFGLPVSAFVGN >gi|333596726|gb|GL892086.1| GENE 1241 1316333 - 1316530 151 65 aa, chain - ## HITS:1 COG:Rv2573 KEGG:ns NR:ns ## COG: Rv2573 COG1893 # Protein_GI_number: 15609710 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Mycobacterium tuberculosis H37Rv # 16 65 197 246 246 75 70.0 3e-14 MCGLGRMSQCRSLMLSILSDRQADRPMEWDIRNGVIQRYGRRHGIAVPISDVVVPLLAAG SEGPG >gi|333596726|gb|GL892086.1| GENE 1242 1317048 - 1317539 423 163 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 240 70.0 7e-64 MAIPAYLWLKDDGGADIKGSVDIHGREGSIELIALNHGIMQPTDKHNGKATSLRIHSPYS FDKEIDASSPYLYKAVSTGQKLKSAEIKFYRINDAGQEVEYFSTLLEGVKIASVCPMMLD IKDPDYEKHNHLELVELLYEKITWRYVDGNIMHSDSWNDRKTA >gi|333596726|gb|GL892086.1| GENE 1243 1317550 - 1317906 212 118 aa, chain + ## HITS:1 COG:no KEGG:plu1461 NR:ns ## KEGG: plu1461 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 108 1 108 118 104 52.0 1e-21 MGWKYEQSTGKMYKDGKLIETGYSGALTNKNNPDRQHVKGLGPLPRGTYKIAGHSNSKGP ITIILEQTSGESFGRSEFRIHGDHKYGPAGFASEGCIILSLSTRRKILRDGGELEVVR >gi|333596726|gb|GL892086.1| GENE 1244 1317903 - 1318337 292 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295096681|emb|CBK85771.1| ## NR: gi|295096681|emb|CBK85771.1| hypothetical protein ENC_21770 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 144 1 144 144 232 98.0 9e-60 MKYPIVLLLCALTVPAIAASTDWPSALHGIASGDTHWIEQAPTLAATADVRQAQLLEDAL AAALTTNTSATLKALQTIDAGKWPHMVGSDIVCTPPLEKSPAEVDAFYQRTRRALLETVE GAQCLWILEATMVELNAEKARQGK >gi|333596726|gb|GL892086.1| GENE 1245 1318391 - 1319281 1068 296 aa, chain - ## HITS:1 COG:MT2649 KEGG:ns NR:ns ## COG: MT2649 COG1893 # Protein_GI_number: 15842111 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 23 296 1 275 275 243 51.0 3e-64 MSDYPTIALIGPGAIGTTIAAVLHDAGRTPLLCGRTAHPELRLRHDEREIVVPGPVLTDP AVITRPADLVFVAVKTTQNADSAGWLRALCDENTVVCALQNGVEQKAQLEAWVNGATVLP SVVWFPAQREPDASVWLRAKPRLTLPDVPQVQRVVEALRNTRCAVEISTDFATVAWRKLL QNAVAGLMVLSNRRAGMFRREDISELALAYLREGLTVARAEGAKLDDAVAEEILANFQRA PEDLGTSILADRQANRPMEWDIRNGVIQRYGRMHGIAVPISDVVVPLLAAGSEGLG >gi|333596726|gb|GL892086.1| GENE 1246 1319387 - 1320508 1249 373 aa, chain + ## HITS:1 COG:ybdK KEGG:ns NR:ns ## COG: ybdK COG2170 # Protein_GI_number: 16128564 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 370 1 370 372 615 75.0 1e-176 MPLPDFKSSEPYTLGIELELQVVNPPGYDLSQDSSALIAAVKDEIKGGEVKHDITESMLE IATGVCQTIDQAAAQFSVMQQSILRAAEEQHIQICGGGTHPFQKWQRQEVCDDERYNVTL ERFGYLILQATVFGQHVHVGCRTGDDAIYLLHGLSRFVPHFIALAASSPYMQGTDTKFAS SRLNIFSGFPDNGQMPWVNSWQEFEGLFRRLSSTSMIDSIKDLHWDIRPSPHFGTVEVRV MDTPLTLGHAINIAGLIQATSHWLLTTRPYKHQERDFLLYRFNRFQACRYGLEGILTDVH TGEHKTVADDIAWLLEQVAPSAEKLGATSAINEIALLLKQGKSEAQRMRDFIADGGSLIS LVQKHCELWATSP >gi|333596726|gb|GL892086.1| GENE 1247 1320459 - 1321631 1366 390 aa, chain - ## HITS:1 COG:YPO1001 KEGG:ns NR:ns ## COG: YPO1001 COG0841 # Protein_GI_number: 16121303 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 371 657 1027 1039 433 64.0 1e-121 MTFAPPTLPGLGNASGFDLRIQAQAGQSPAELERVTREVLAKANQHPQLSRVFTTWSSNV PQLTLTVDRERAARLDVPVSRIFSSLQTAFGGTRAGDFSVNNRVYHVVMQNEMQWRERAE QISELFVRSNSGERVRLSNLVTITPTVGAPFIQQYNQFPSVSMSGSAAEGVSSSTAMAAM GEILAENLPAGYDYAWSGMSYQEQQTGNQAIWIVLAAVVMAWLFLVAQYESWTLPASVML SVLFAIGGALVWLWLAGYANDVYVQIGLVLLIALAAKNAILIVEFARARRMDGMGIVDAA REGASRRFRAVMMTAVSFIIGVLPMMLATGAGAQSRRIIGTTVFSGMLVATVVGIVFIPA LFVLFQRLREWGHGLTDSSPTARSASAPEK >gi|333596726|gb|GL892086.1| GENE 1248 1321665 - 1323593 2555 642 aa, chain - ## HITS:1 COG:YPO1001 KEGG:ns NR:ns ## COG: YPO1001 COG0841 # Protein_GI_number: 16121303 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 642 1 644 1039 691 58.0 0 MLTFFIKRPRFAMVIALVITLLGAIALRIIPVEQYPQITPPVVNVSASWPGASSADVAEA IATPLETQLNGVDHMLYMESTSSDEGTYSLNITFAAGTDPDLAAIDVQNRVSQALAQLPT EAQQNGVQVRKRATNLMLGVSLYSPNNTHTPLFVSNYASTQVREALSRLPGVGQVQMFGA RDYSMRIWLRPDRMNALNVTTDDVAQALREQNVQGAAGQVGTPPVFNGQQQTLTINGLGR LNQADDFASIIIRAGEMGQLVRLKDVATIELGSRSYSSGAQLNGHDSAYLGIYPTPSANA LRVADAVRAELERLSTRFPDDLVYEVKFDTTSFVAATIKEIGVSLALTMLAVVVVVSLFL QSWRATLIVALAIPVSLVGTFAVLYTLGYSANTLSLFAIILALTMVVDDAIVVVESVETL MAEGQSRTAATALALRQIAGPVIATTLVLLAVFVPVALLPGIVGELYRQFAVTLSTAVTL SSLVALTLTPALCALLLRPRPKKPAAVYRAFNRGLDAARGFYTRIVNVLNLRPWLALLAT AGAAAVVVFSFMSMPKGFLPQEDQGYFFASVQLPEAASLERTEAVMTTARELIAKNPAVE DVIQVSGFNILNGTSASNGGFISIMLKDWSQRPPLDEVMGTL >gi|333596726|gb|GL892086.1| GENE 1249 1323603 - 1324667 983 354 aa, chain - ## HITS:1 COG:YPO1000 KEGG:ns NR:ns ## COG: YPO1000 COG0845 # Protein_GI_number: 16121302 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 5 350 48 404 425 239 42.0 6e-63 MKFPLLFALLACTLQPAFAAAIPVRVATVEQTAHAAERQIPGRIEAIHTVELRARTEGVI TRIHFRDGQYVKKGDVLFELDDAEPRAALRLAQAEVRSAEATLRQAQQQLSRFESLGSSN AISRHDVDNARMQRDVASAALEQAKARLDTRSVTLNYTRITSPIDGRVGHSNFHVGSLVN PASGVLVEVVQLDPIRIAFALEEGAFATKAGQHADIRAMKQAWQALIDSNGQRISGELTS VDNRIDPRTASVMLRAEFANPRHQLLPGGNVNVYLRPASEQPVLTLPAAAVQQNGDGFFA WVVNADGKAEMRPLKVAGQIGQQFQIASGVKPGERAITDGAQRVQPGAAVQILN >gi|333596726|gb|GL892086.1| GENE 1250 1324778 - 1327486 3487 902 aa, chain - ## HITS:1 COG:YPO0451 KEGG:ns NR:ns ## COG: YPO0451 COG0474 # Protein_GI_number: 16120780 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 7 899 9 902 908 1220 68.0 0 MTKKNFSQNMPPAGGQAYQQTVEQVLAQAQSQANGLDRTEAQARLQKHGPNALPEKKGKP GWLRFLAHFNDVLIYVLLAAAVLTAVMGHWVDTLVILGVAVINALIGHIQESNAEKSLKS IRNMLSSEARVIRNGNHETIPTTEIVPGDIIVLRAGDRIPADMRLIEAHNLRVEEAILTG ESTVVDKHTNPLNGELPLGDRTNLVFSGTTVSAGGGVGVVIATGQETELGHINQMMAGIE KHRTPLLVQMDKLGKAIFAIILAMMAALFVFSLVFREIPMGELLLSLISLAVASVPEGLP AIISIILSLGVQAMARKRAIIRKLPTVETLGAMTVVCSDKTGTLTMNEMTVKAIITADAC YRVDGNSYEPVGHIYLEGSDEPVQIQPGTVLEQYLRTIDLCNDSQLIQDERGLWGITGGP TEGALKVLAAKAHLAPVMTTLINKIPFDSQYKYMSTHYQIGGEEQILITGAPDVIFALCE QQQTRNGAQAFNRAYWENEMERYARQGLRMVAAAFKPANGEQALTHDDLNHGLIFLGIAG MMDPPRPEAIEAINACQQAGIRVKMITGDHPQTAMSIGQMLGITNSEQAVTGYQLEKMDD AELAEAAVKYDIFARTSPEHKLRLVKALQDKGEIVGMTGDGVNDAPALRQADVGIAMGIK GTEVTKEAADMVLTDDNFATIASAVKEGRRVYDNLKKTILFIMPTNLAQGLLIVIALLAG NIIPLTPVLILWMNMATSATLSFGLAFEAAERNIMRRPPRQTGQHVMDAYAVWRVAFVGT MIAIAAFALEAWLAPRGHSAEFIRTVLLQMLVCAQWVYMINCRNTDGFSLNRGLLANKGI WLVTGVLFLLQAAIIYLPFMQMLFGTEALPLRYWFVTLAVAGVMFFVVEIEKRLTRRFRK SA >gi|333596726|gb|GL892086.1| GENE 1251 1327684 - 1327794 86 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFGIYRGRRLALYIVAAIVIATLIGYSTYSFVKLFS >gi|333596726|gb|GL892086.1| GENE 1252 1327975 - 1328223 291 82 aa, chain + ## HITS:1 COG:no KEGG:ECL_03152 NR:ns ## KEGG: ECL_03152 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 82 1 82 82 114 96.0 2e-24 MKHPLESLLTAGGILLIALISCLLLPAPSLGLVLAQKLVQTFHMVDLNQLYTILFCVWFL LLGAIEFFILRFVWRRWFSLAS >gi|333596726|gb|GL892086.1| GENE 1253 1328278 - 1328619 440 113 aa, chain - ## HITS:1 COG:STM0581 KEGG:ns NR:ns ## COG: STM0581 COG2207 # Protein_GI_number: 16763958 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 113 1 113 113 199 85.0 8e-52 MTISAQVIDTIVEWIDDNLHQPLRIEEIARHAGYSKWHLQRLFMQYKGESLGRYIRERKL LLAARDLRESDERVYEICLRYGFDSQQTFTRIFTRTFNQPPGAYRKENHSQTH >gi|333596726|gb|GL892086.1| GENE 1254 1328652 - 1329719 1408 355 aa, chain - ## HITS:1 COG:XF1739 KEGG:ns NR:ns ## COG: XF1739 COG2220 # Protein_GI_number: 15838340 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Xylella fastidiosa 9a5c # 17 354 32 368 385 319 45.0 5e-87 MIIASAASLPFVLNAGFGQPPQGAQLSEVEASPHYRDGQFHNTLPTPGFTGQQNMLVAWW QFLTRKTENARPAQPLPLVKTDLASLSPDQDTLVWLGHSSWYMQLAGKRILIDPVLSNYA APFSFLNKAFAGEYPWRAESMPEIDLLIISHDHYDHLDYATIKALLPKVKRVVTPLGVGS HLRYWGMSQDIIDERDWNQSVHISDALTVHVLPARHFSGRGIKRNQTLWGSFMFVTPERK VYYSGDSGYGPHFKSIGEQFGGVDLAIMENGQYDQDWKYIHMHPAETAQASADLNAKAVV PGHNGRFVLAKHTWNDPLIQLAKASKDKNYRLLTPELGEPVRVSDSTQQFREWWE >gi|333596726|gb|GL892086.1| GENE 1255 1329947 - 1330537 731 196 aa, chain + ## HITS:1 COG:STM0580 KEGG:ns NR:ns ## COG: STM0580 COG1309 # Protein_GI_number: 16763957 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 192 1 192 193 271 71.0 7e-73 MARPKSEDKKQALLEAATAAFAQSGIAASTALIARNAGVAEGTLFRYFATKDDLLNALYL HLKQDLCQTMLANLDRTLSEPKEHTRNIWNSYVDWGIRNPLAHAAIRQIGVSEKLSAETE QAVKEMFPELHELCRRSVRPVFMSDEFKTFGDALFLSLAETTMEFATRDPSRAVDFKALG FEAMWRGLAEEEIHGQ >gi|333596726|gb|GL892086.1| GENE 1256 1330527 - 1330895 416 122 aa, chain + ## HITS:1 COG:STM0579 KEGG:ns NR:ns ## COG: STM0579 COG2315 # Protein_GI_number: 16763956 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 121 1 121 122 177 66.0 4e-45 MDSKSLQDHARRVALEMPFTEHCWPFGPEYDVFKVGGKIFMLMATAHGRPHVSLKSDPEK SLLNQQIYRGVEPGYHLNKKHWISLYGTDDVTPELVTDLITDSWNLVVDKLPKKDQKWIR PG >gi|333596726|gb|GL892086.1| GENE 1257 1331016 - 1331669 1007 217 aa, chain + ## HITS:1 COG:STM0578 KEGG:ns NR:ns ## COG: STM0578 COG0778 # Protein_GI_number: 16763955 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Salmonella typhimurium LT2 # 1 216 1 216 217 387 89.0 1e-108 MDIISVALKRHSTKAFDPAKKLTAEEAEKIKTLLQYSPSSTNSQPWHFIVASTEEGKARV AKSAAGTYVFNERKMLDASHVVVFCAKTAMDDAWLERVVDQEEADGRFNTPEAKAANHKG RCYFADMHRVDLKDDDQWMAKQVYLNVGNFLLGVAAMGLDAVPIEGFDAAILDEEFGLKE KGFTSLVVVPVGHHCVEDFNATLPKSRLPLSTIVTEC >gi|333596726|gb|GL892086.1| GENE 1258 1331697 - 1332287 240 196 aa, chain - ## HITS:1 COG:no KEGG:plu2753 NR:ns ## KEGG: plu2753 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 195 11 204 208 178 47.0 1e-43 MIDSADFSQKLGLISRNVEHTEAFLARGTADFHLPGFLLPVGYRFLKSRYGDEYRLVTTD GGKPYTAYAVKLTFHKEITFPHGAATQVMVWRTPRAVHQRVISGLPQLFFQWVLSEYDIV VSDSEQTGDGQRFWLRMIDWAFTMNYRISVADGTVGEEWTLTPVNSYAELEERWIAFAWG NDRDVHPHRRLVISKA >gi|333596726|gb|GL892086.1| GENE 1259 1332453 - 1333322 712 289 aa, chain - ## HITS:1 COG:PA1263 KEGG:ns NR:ns ## COG: PA1263 COG1396 # Protein_GI_number: 15596460 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 12 275 43 305 314 288 55.0 9e-78 MALMSEPVTSLQDDTRKQLGAFLRARRESLDPQRLGLPRSGRRRTPGLRREEVAMLADVG VTWYTWLEQGRDVNPSSAVMAAIAKALQCTPTEARHLFVLAGLPPGEAPQAVCCEGISEG TRRLLDTLLPKPASIQKPNFDIVAWNDSFGHLMGVDFNAIPPEDRNCIYLFLTHPAWRAR LGKRDDVLPIFVSYFRAAMAEHRGDPLWEAKLARFFAVSEEFKTLWHQRNDVRGVENQLK LFTHPELGDFHLQQMYWYSAPRNGSRLLVYLPVDEAGERAMAWLAEQGK >gi|333596726|gb|GL892086.1| GENE 1260 1333430 - 1334866 1646 478 aa, chain + ## HITS:1 COG:PA1262 KEGG:ns NR:ns ## COG: PA1262 COG0477 # Protein_GI_number: 15596459 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 9 459 11 460 480 392 56.0 1e-109 MNTSVVSPGRAGLILLLTGQMLPLIDTSITNVALDSITHSLHATATELELIVALYGVAFA VCLAPGSKLGDNLGRRRLFMWGVASFGLASLLCGMAGNIEQLLAARIIQGAGAALIMPQI LATLHVTLKGTAHARAISLFGGIGGIAFIVGQMGGGWLVSADIAGLGWRNAFFINVPICL VVLALSRRYVPETRRDTPSRIDWIGTVLLTAILCCLLFPMALGPQWHWSWPLKAALLAIV PLACLMVLNARKKERENAHPLIAPRLLQLRSIRFGVLIGILFFSVWSGFMFCMALTMQSG LGMAPWQSGNSFIALGVTYFISAWFAPRLIARYSTSAILLTGLAVQLVGLVALIATFRHW GMQNTALTLAPATGLVGYGQALIVNSFYRIGMRDIQPDDAGAASAILSTLQQAALGLGPA IFGAILLHGLQSYHGDYTQAVNVFLMVETAMMVVLALATLRMRHRLCLPVVKACPATK >gi|333596726|gb|GL892086.1| GENE 1261 1334934 - 1336178 1430 414 aa, chain + ## HITS:1 COG:STM0569 KEGG:ns NR:ns ## COG: STM0569 COG0668 # Protein_GI_number: 16763946 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Salmonella typhimurium LT2 # 1 412 1 413 415 676 83.0 0 MQELIAQVEELGIEINHTTSLVIIFGIIFLTALIVHFILHKVVLRAFEKRAQASSHLWLQ IITQNKLFHRLAFTLQGIIVNVQAVLWLQKGSEAAEMLTTCAKLWVMVYALLSFFSLLDV IFNLSQKMATASQLPLKGIFQGIKLVSAILVGILIISLLIGQSPAILISGLGAMAAVLML VFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGANGTVTDIGLTTVKVRNFDNTITTIPT WALVSDAFINWSGMSASGGRRIKRSLNIDTTSIHFLDEQEQQKLIQAKLLKPYLAARHEE ISLWNQQNGEGESVLNLRKMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPDANGLPI EIYAFTNTVIWAEYEDIQADIFDHIFAVVDEFGLRIHQSPTGNDIRSLAGVIAQ >gi|333596726|gb|GL892086.1| GENE 1262 1336179 - 1337150 1219 323 aa, chain - ## HITS:1 COG:BH2313 KEGG:ns NR:ns ## COG: BH2313 COG1609 # Protein_GI_number: 15614876 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 322 1 326 337 195 35.0 1e-49 MSIQKIAQLAGVSVATVSRVLNNSDTVKAKNRERVLQAIQESNYQPNLLARQLRTARSYM ILVMVSNIANPFCAEVVKGIEAEAEKNGYRILLCNSGSDIERSRSGLSLLSGKIVDGIIT MDAFSKLPELAALIGNAPWVQCAEYADAGAVSCVGINDVDASQHVVSQLADGGRKRIALI NHDLSYKYARLRERGYKSVIHLRDLDYQAVEYASELSSGAGMAAMQNLLKTNPPDAVFAV SDTLAAGALRAIQQAGLRVPEDIAVVGFDGTELAEMISLTTIEQPSRDIGRKAVDLLLNK IDNPDAPTERVMMDWRFISRAST >gi|333596726|gb|GL892086.1| GENE 1263 1337226 - 1338368 1367 380 aa, chain - ## HITS:1 COG:BMEI0661 KEGG:ns NR:ns ## COG: BMEI0661 COG0673 # Protein_GI_number: 17986944 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Brucella melitensis # 5 378 8 373 373 147 29.0 3e-35 MINVGIIGSGFIGPAHIEAIRRLGFVQVVALCDGALGKAQEKARQLNVPHAYASVEELLA HPSLHVVHNCTPNHLHAEINRQILRAGKHVFSEKPLCMTPDEARELVALAEQAGVVHGVS FVYRQFAMVRQAASMMRAGSLGRLFASHGSYLQDWMLLETDYNWRVDAALGGASRAVADI GSHWCDTVQYVTDGRITEVMADLSIVWPTRKASAGGHQTFSHDEQAEYEDKPVSTEDFGS VLFRFDDGSKGSFSVSQVSAGRKNRLTFEINGSERSLAWDQEIPQQLWIGHRARANQTLS DDPGLMNSDVADSAHFPGGHIEGWPDAFKNMMAQFYRAVQAGAMPDKPAFATFHDGANVM YIIDAIVKSHQQQRWVRVGY >gi|333596726|gb|GL892086.1| GENE 1264 1338361 - 1339386 1031 341 aa, chain - ## HITS:1 COG:AGl986 KEGG:ns NR:ns ## COG: AGl986 COG1082 # Protein_GI_number: 15890609 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 341 1 340 349 468 65.0 1e-132 MRTIKGPGIFLSQFIGAEAPFNSLDGLAGWAAAKGYKAVQIPCNHPHIFDVEKAAESQAY CDDFAAKLAAHGLVISELSTHLEGQLVAVNPAYSEAFDHFAPAAVRGNDVARRAWATEKL KQAAVASARLGLKAHATFSGSLAWPFFYPWPPHNEQRFQEAFEALATRWRPILDTFDEQG VDVCFELHPGEDLHDGVTFERFLALVDNHPRCNILYDPSHMLLQQMDYLTFIDIFHARIK AFHVKDAEFRPNGRSGVYGGYQPWINRAGRFRSPGDGQIDFRGIFSKLAQYDYDGWAVLE WECCLKDGDTGAREGSEFIRRHIIPVSGRAFDDFAAGGGHD >gi|333596726|gb|GL892086.1| GENE 1265 1339402 - 1340637 1706 411 aa, chain - ## HITS:1 COG:ECs2901 KEGG:ns NR:ns ## COG: ECs2901 COG0477 # Protein_GI_number: 15832155 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 20 410 6 406 425 249 37.0 9e-66 MVSTESSEKAITQHRLLVPRLSLMMFLQFFIWGSWSVTLGLVMTQHNMSLLIGDAFSAGP IASILSPFVLGMLVDRFFASQKVMAVMHLAGAAILWFVPGALIAENGALLIGLLFGYTLC YMPTLALTNNIAFHSLANVDKTFPVVRVFGTIGWIVAGIFIGVTGVASSVTIFQVAAVSS VLLAIYSLTLPHTPAPAKGLPVKVRDLFCADAFALLKTRHFFVFSVCAMLISVPLGTYYA YTASYLADAGIADVSTAMSFGQMSEIVFMLVIPLLFRRLGVKYMLLIGMLAWFVRYAMFA LGVSEEGRILLYLGILLHGVCYDFFFVVGFIYTDRVAGEKVKGQAQSMIVMFTYGIGMLL GSQISGALYNRLVAGQTVPQAWVTFWWIPAVAAAAIALIFLLTFKYDDDKA >gi|333596726|gb|GL892086.1| GENE 1266 1340853 - 1342238 1729 461 aa, chain - ## HITS:1 COG:STM0568 KEGG:ns NR:ns ## COG: STM0568 COG1113 # Protein_GI_number: 16763945 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 461 1 461 464 772 90.0 0 MKDASSASGHGRAEASSDQSPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAV LLGYAIAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGM AELTAAGIYMQYWLPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMI GFGLWLLFSGHGGERASIDNLWQHGGFLATGWKGLILSLAVIMFSFGGLELIGITAAEAR DPHKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSDSSPFVMIFHDLNSNVVASAL NFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLFLSGAITSLVV LINYLLPKQAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRKGRETQFKALLYPAGNYI CIAFLGLILVLMCAMDEMRLSAMLLPVWVVFLFVAFKLSRR >gi|333596726|gb|GL892086.1| GENE 1267 1342340 - 1344313 2134 657 aa, chain - ## HITS:1 COG:alr4794 KEGG:ns NR:ns ## COG: alr4794 COG3211 # Protein_GI_number: 17232286 # Func_class: R General function prediction only # Function: Predicted phosphatase # Organism: Nostoc sp. PCC 7120 # 5 656 1 726 728 532 42.0 1e-151 MGRPLKSVFKKEHRDDITNRSANPVFSEVAEVFLSRRRFLQMGAVAGAAVSFPYLISPES AVAAVSKPSALAKAVSLGFTSIDVSTEDTVRVPEGYIARPFYRWGDPTGIKNNMPAFKPD ASNTTDEQAVQAGMHHDGMAWFSLPQGGQNPEHGLLAMNHEYIDNGMLFTDGTANWSLDK ARKGQNAMGVSVVEVKKAGSDWEVVRPSSFARRITVNTPMQLTGPARHQDLMKTAADPQG ERVLGTMQNCANGHTPWGTYLTCEENWSDIFVKKADLNPLEKRYGISDSDESYRWNEVDD RFSVDKTPNEPNRFGWVVEIDPYNPTSTPRKHTALGRFKHEGAAVTLAADNRVVVYMGDD QKFEYIYKFVSDKKYDPANREANMHLLTSGTLYVARFNEEGSGDWLPLIFGQNGLDKSNG FESQGDLLIKTRLAADVVGATKMDRPEWIAVDPHASGSVYCTLTNNSDRGKEGKAPVDAA NPRASNVFGHIMHWHEDGADPAAARFKWDILVLAGRTDGDDPKAKGSMQGAAFGSPDGLS FDHQGVLWIQTDVSSSTINKKAYEGMGNNQMVATIPGTNEYRRFLTGPRGCEITGIAFTP DNRTLFINIQHPGEGGDDITDPANPRAVSNWPDASPDGRPRSSTVVIVKADGGIIGS >gi|333596726|gb|GL892086.1| GENE 1268 1344441 - 1346609 2774 722 aa, chain - ## HITS:1 COG:YPO1753 KEGG:ns NR:ns ## COG: YPO1753 COG1629 # Protein_GI_number: 16122009 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 12 722 48 758 758 731 53.0 0 MHKTLLAIAIGAVTHSAFAADEKKEDTIVVQSTTGSDFKPGGDQLVPAFLDGQVANGGRM GMLGQQNAMDVPFNIISYTSKLVEDQQAKTIADVVANDAGVQFVQGYGNSAETFRIRGLK FDGDDMTFGGLSGVLPRQVVDAQMVDRIEIFKGANSLMNGAASSGVGGMINLEPKHAGDT PQAKVGVDYTSDSQIGTTLDAGRRFGDNDQFGARVNLVHREGETGVPNDRRRTTLLSTGL DYKGDRFRTSLDLGYQKKTFHGSPTSVNISAVDFVPEPPKNDRNFSQKWAYSDIENEFGM WRSEYDITDIWTAYTGLGAQHAHEEGIYSAPKLLDKSGNATVSRLDTNRISDSVSGMAGI RGNFSTGFVSHKVNVGYSAMTKNEKIAWKMSAAADNPTTNIYHNTGVAMPDSTNFSGSGG KYSDPLTSGRTRTQGWLLSDTLGVLDDKLLFTAGARHQKVVIRGYNKITGAENDGDGFDG SRWMPTYGVVYKPWEEISLYANHTEALQPGETAPRSANNYGQSTGIVHSKQNEVGVKADF GRVGGSLALFEIKMPSAILDDSGHYGLDAEQRNRGVELNVFGEPMLGMRLNASATWLQAE LTKTKNGVNQGNDAIGIPNFYAVLGAEYDIKPIEGLTATARVNHSGTQYADLANSKKLDS YTTLDLGMRYRFAVNHNANQMTLRAGIDNVTNENYWASVDDSGTYITQGEPRTFKVSVGY EF >gi|333596726|gb|GL892086.1| GENE 1269 1346824 - 1347099 395 91 aa, chain - ## HITS:1 COG:no KEGG:ECL_03172 NR:ns ## KEGG: ECL_03172 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 91 1 91 91 129 94.0 5e-29 MKKTTAILMGAAFLFTTNTFAAELLTKNEFEKVESQYEKIGTVNTSNEVSVDDAKKELIE KADKQGADVLVLTSGNTNNKIHGTADIYKKK >gi|333596726|gb|GL892086.1| GENE 1270 1347547 - 1347936 85 129 aa, chain - ## HITS:1 COG:STM2230 KEGG:ns NR:ns ## COG: STM2230 COG1974 # Protein_GI_number: 16765558 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 129 39 167 167 194 66.0 4e-50 MGFPSPAADYVESRISLDERLIHKPAATYYMRAGETIYRCGIMKDALLVIDSSLKPCDGS LLICDCNGEFKVKRYRIYPQPHLENVTNGRREKLPGNDDGISGALPIFGVITYIINDARS GEFDDCPVM >gi|333596726|gb|GL892086.1| GENE 1271 1348050 - 1348412 109 120 aa, chain + ## HITS:1 COG:yfdG KEGG:ns NR:ns ## COG: yfdG COG2246 # Protein_GI_number: 16130282 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 120 1 120 120 165 85.0 2e-41 MLKLFAKYTSIGVINTLIHWVVFAVCIYAFHTGQALGNFAGFVVAVSFSFFANARFTFKS STTTMRYMLYVGFMGTLSAAVGWAADKSGMAPIITLVVFSAISLVCGFIYSKFIVFRDAK >gi|333596726|gb|GL892086.1| GENE 1272 1348409 - 1349326 542 305 aa, chain + ## HITS:1 COG:yfdH KEGG:ns NR:ns ## COG: yfdH COG0463 # Protein_GI_number: 16130283 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 302 1 302 306 557 89.0 1e-159 MKISLVVPVFNEEDAIPIFYKTVREFEGLKQHEVEIVFINDGSKDATESIIKALAVADPL VVPLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGAEMVLAKR SDRSTDSRLKRKSAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGI LSWVGGRTDVVEYARAERVAGNTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFVAGLS FLYGAWMIVDTLAFGNPVRGYPSLLVSILFLGGVQLIGIGVLGEYIGRIYVEVKNRPRYI LKGNK >gi|333596726|gb|GL892086.1| GENE 1273 1350232 - 1350798 73 188 aa, chain + ## HITS:1 COG:no KEGG:Pat9b_3529 NR:ns ## KEGG: Pat9b_3529 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 3 188 306 491 493 86 27.0 6e-16 MVSLLALDSSISHFPRVYIGISAYIMYICFLFYKACSISKLETLKAMILIPIIYGTGYGY SYVNALSDQDKLNRQTIYSIKESTKDIDYNTVYPIFVGNAPESPVLSNAKRNYPLISSMV VNYFSTWYWPHRYWSFNGYHQLYLRKKTGLIDYNKKMMCSFEVYKKTQDFTIRKNGDIII IDFNRSKC >gi|333596726|gb|GL892086.1| GENE 1274 1350831 - 1352969 290 712 aa, chain - ## HITS:1 COG:no KEGG:Ctu_11920 NR:ns ## KEGG: Ctu_11920 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 80 196 76 187 735 72 35.0 6e-11 MAEQKVKLTDLPAATDTIDTAQLLINQNSTDQKLLVTHFLRSKNNLSDLADIGQARANLD VPSVDEVNDKLTGFVDGSNTFLDGASLASRTDFIWDEESKSWYYWSGELPKDVPAASNPD TTGGIGVGAWSAVSDASLRTDLSSGEKASLVGYGSSTVKDALDSVVNKRVLYFSRFGTLQ SLQSYITSNNLKNVEIIFDQVVNFGPGSGGLGTIVTLSNMDWLEIRGLVIRDTLLYSGAF DLTRVFDLTNITNLVFEVDASSTLEYVGDDKRGLTPLRLNGCDNFTFIGKTNKCYQGYEA HSVKNLYARSVNNDTRYPHSITDIGTVDIYTTNNGCRRDFFLQNKCAGGQITVDAVDTQQ GTPIKMYFFNGNMDNQVSNLYVKYKYRSTGRYTLPYRVAPIWLDWGWDSSITEPLISGVM RNITIDYDVVGGNWGSVIGTTKMIDETIGDVTARGYVYSNIYIKGRIELGGGDSGNNAWV YNFNSGDNWKSGDSVNGFYLKDLVVRKLNGGSVYLNTNQLAGAATSSGQIVLDNVSAPEM ALYAQNYGDKVMFNNCNLYDFTTKNAVKNAYQSLKTTCTIRKASGDASSFQIGSMSVYRT ICFLSVNIKATSPSSGSTSTWGGSVVGQLVQGTTAGNVTLTGNTNTLYTTGTALNPSIRC ETDGRIIITFAGWESLDAFITCDIAMVYNEYSGGSNNTTLGLTNKKFNVGNV >gi|333596726|gb|GL892086.1| GENE 1275 1353611 - 1353847 103 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAITSFADTDVTYADGQKNKEPVPDEILSSGFVPPVRMPDGSISAGSKLAANHLNTLLND LYAQVADLKARVTALEGA >gi|333596726|gb|GL892086.1| GENE 1276 1353856 - 1354626 195 256 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWRSQVSDDWIDIDFLALIRQRPTDWLKKGGQVPDLFAAVGVLHPEIEARAKYIYLTQSI YNAHGIELDRFGQYVDVGRDGMSDDDYRRAIMQAKLATAFSGTPDNVMVVTATTTSSTDV ELVELYPAAFSVHATGPYVPTNINAIVDRASVAGVRAYSTHDYGLNGFSLAGIDTNSGQA LQVGDNTAMQVDTDTALGLNRGSVFIAGSYLDAAGSVSGVLEVNDSYLGVADDDYLLIFS RDYGVTGTMLCGAMPK >gi|333596726|gb|GL892086.1| GENE 1277 1354604 - 1356022 479 472 aa, chain - ## HITS:1 COG:lin1710 KEGG:ns NR:ns ## COG: lin1710 COG3299 # Protein_GI_number: 16800778 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Listeria innocua # 252 470 166 379 383 99 33.0 1e-20 MADYITATGFDKPTLPEMVQEIGDAIETVVGPINREADSTTGQWIGIEAEQNAIHFETEE ELWASRFLASAEGFALDALGDWMGGITRHGKTTTKVNAVIYGSESRLVPSGSLASFGNYQ FRMTEDYTISRSTLLDGEVRVSNNTQTSYTVRIAGVDHTYTKVAGDTVNTIATGLAAVVD STSQYSATANGSVIRLTSENLIEGYAVSLSAGLAWQLIGSPAIFEATEAGPIVVPVGGLN NPVSAITGWTGVNNLVQGATGSDRESDTDYRQRLYQSRASSGGAATIPAIETRLITEVSG VTLAKVIENDTMTTVDSIPPKAIHTIVSGGLEQDIADAIWKYKGAGIATYGSIAITVYDR YERPHLVNFSRPTEVDIYVKVDVVLLDTEEPLPATVVDAIKQGVVAYGATLGLGDDVITQ RIYGYIYANTTGIGKMTITVSTDGTTFAESNISVAENSFASFSAANVEVTGV >gi|333596726|gb|GL892086.1| GENE 1278 1356087 - 1356428 221 113 aa, chain - ## HITS:1 COG:no KEGG:GbCGDNIH1_1566 NR:ns ## KEGG: GbCGDNIH1_1566 # Name: not_defined # Def: hypothetical protein # Organism: G.bethesdensis # Pathway: not_defined # 11 110 19 118 129 80 44.0 2e-14 MIDFRITDNKVVFTNGLLQYVDGAERVRQQVEFRLNLWRGEWFLDSQFGTPYLQDVLGKQ VTLNGALSAIRTEILAVEGVTGIVEFTYNFDRAERKLSVEFTANTEYGLVQYP >gi|333596726|gb|GL892086.1| GENE 1279 1356496 - 1356732 113 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENALIILVVLIVLFIVFRKFNLWYWKIQEHIDNQKQIISLLEKVSSRVGSMDEEITELS RIYKGKNQPAPKSGLLDD >gi|333596726|gb|GL892086.1| GENE 1280 1356742 - 1357416 186 224 aa, chain - ## HITS:1 COG:no KEGG:Bpet0994 NR:ns ## KEGG: Bpet0994 # Name: not_defined # Def: putative bacteriophage protein # Organism: B.petrii # Pathway: not_defined # 5 222 2 229 230 89 30.0 1e-16 MADNSDVVEALRRLVSSEMDTVNTALPCTVVSYSGGKVTVKPDGEKIYADGDTNAYPVLS DLRMVWPQFANGQAGLKGPVQAGDKCLLVVCQQATDGSDDTRRFDIIDSYVIPGAGYSDA VPGNDDVRMYFGDAFIAIDANGKMTIKAPGGVEETTPLHTVKGSMTVEQLFTYQGGMTGS GGETSVATITGTMQVIGDVVINGIKIGTHKHPGDSGGTTGEPIN >gi|333596726|gb|GL892086.1| GENE 1281 1357416 - 1358351 444 311 aa, chain - ## HITS:1 COG:no KEGG:Bpet0993 NR:ns ## KEGG: Bpet0993 # Name: not_defined # Def: hypothetical protein # Organism: B.petrii # Pathway: not_defined # 1 305 1 289 304 170 32.0 7e-41 MSLFLRTGEIIVGQPQGEAVSIKDLRFEFDITKTASKTANEASLKIYNAAPTTITLMETV NNVVIIKAGYVNDIGAITIFTGTTCRSLTYQDGPDIITEMELRDSVIPLRDAKISVSFPP NTSAMTVLDGVAKNFGLPIKKSISKVQDKQYVGGYAYNGRVRDAMDRVCNYLGLEWSAQD SEIQIIKKGGVYADTAVVLSKDTGMIGYPRREAKTMTEKTAAKQGIKYGQKGIVRTVVDV EDPTAKLKDRVTLEVQGYRVKSLLNPAIYPGAYVQLKSRGIDGEFFRVEEAHYTGDTHGQ EWSVEALLRFI >gi|333596726|gb|GL892086.1| GENE 1282 1358326 - 1358667 210 113 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPLNFQAGFTDQTLQAVFDDTPVTLRLRWNERFGFWSLGIYDRESLPIITGVKLVQNYP LLKNFSFDNFSGDIYFIRTYGEKVRPDIDSIGGDHLLVYATKEEIDEFVSANG >gi|333596726|gb|GL892086.1| GENE 1283 1358664 - 1359380 369 238 aa, chain - ## HITS:1 COG:no KEGG:HIBPF03460 NR:ns ## KEGG: HIBPF03460 # Name: not_defined # Def: hypothetical protein # Organism: H.influenzae_F3031 # Pathway: not_defined # 16 201 9 184 193 73 27.0 6e-12 MATDVLGFLWNSSGDSTFSLNDPGVGNLEFDTLDQETHEWTRDVTMNPVENGSPISDHII RQPKKITVAGMISNAPVTGVLTQAANALDSGFDGEDRVNTAIKLLDSLFLSNELVTIYTK NYTYENMLIQGINIPRRVDDGDAVNFTIDAVQANIVSTATTEVPPGVGVRKTDATSNGAT AKAGTSNSADPATANRATPTKNVGKNTGSILSQALDGLSGSGGKLQEYLGNIIGNVTP >gi|333596726|gb|GL892086.1| GENE 1284 1359382 - 1360953 773 523 aa, chain - ## HITS:1 COG:RSc0873 KEGG:ns NR:ns ## COG: RSc0873 COG5281 # Protein_GI_number: 17545592 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Ralstonia solanacearum # 13 267 38 296 1366 89 23.0 1e-17 MVIRELLIRLGLTGSDSVGRGLDRVDGKVDKTIQSFNALGGVLATVFGAVTISNIAKTAD EMQSLEARIGMLPQTITTGAEAFDTVAKRASAARQGIEEYASFYIKAGNATQDFYKDQEQ VLQLTDAVSIALAASGSTAVAQGQAFFQLGQAIGSPTVQMEEMNTLIDVAPDLFRALGKA IPGANNNLKAFISTGKVTGKMLAEGLIKVLPQFVDQFKQMPMTIGQALVLVNNRWSMFIN RLNRSSGAVTWVANKFLWMADKIEYALDSVIDALGGAENAVKLLGVALGAAGLVGSVYLL SAAFTALTSPVFLVIAALAALFLVGEDINSWLNGNKSLLGDMIGPVSEYTDSINSLKVAL TDMKDMAVWALNVLKSLTNFFNSSQDKAQEWGDKLGTTRFGPWLKEKAGWLVEDLGKWAS WGNAQTNGAFDVPRMWSDMLAGVRGFNQDAKGGNTLLPSYQSLSLPPPSAAAGPKIDVNI GNISVPAGTPDEQVKFLQDSAKSAFSDYGWNALGNTLNFNTGG >gi|333596726|gb|GL892086.1| GENE 1285 1361115 - 1361552 413 145 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQEFATFHIGDKEFKAAKMNAFAAAKHLVKLKTLLDKGLASGGDANAIQLLAGIDEKTL EEVIIPILRDSSTFSVTDEKKIDSPNAMNLVFTVDTLFDFFELCWEVLKLNFTPFFTKVL TLFGLSPEELANRVQSLAKSATQES >gi|333596726|gb|GL892086.1| GENE 1286 1361589 - 1362035 287 148 aa, chain - ## HITS:1 COG:no KEGG:HICON_10820 NR:ns ## KEGG: HICON_10820 # Name: not_defined # Def: hypothetical protein # Organism: H.influenzae_F3047 # Pathway: not_defined # 7 147 4 141 141 88 38.0 9e-17 MAAELTGSYDGSEVFVTIGPLLLTGFSDGDSITARKNANFYESRAGLDGSVGRARVTDKR GQIELHLLQTSAANDELSALMNLDSLTQDGKAVYPVSVTDFSGRTVIAAGQAWLYQLGDV AFSTNEVGERIYTFECADLKFSLGGNNV >gi|333596726|gb|GL892086.1| GENE 1287 1362038 - 1363378 625 446 aa, chain - ## HITS:1 COG:no KEGG:Bpet0987 NR:ns ## KEGG: Bpet0987 # Name: not_defined # Def: hypothetical protein # Organism: B.petrii # Pathway: not_defined # 1 442 1 452 454 225 36.0 4e-57 MANLSQIANVNISLDTASIAKASFGIPLAVSPTTAFSERIRKYSSYSAAQQDGLDPQTLK ALSAVFSQTPRPNQAWVGRRNAVSVDLTVTNATITTGNIFAFSVNGTTVTYTAASGDDAS DVYTGLKTALAAQSVVDALFTSTADAEGLHLVVKVPETATIVKPVTNLSISTAGSADGLE ADLNAIQQEDPGWYGFALVERGDALIQDAAAWAETQTKLFFACSNNADIWTSADDDIASQ LQDLQYLRTALIAHKAAATEYPEMAWMGRCFTIAPGGETWALKTLAAITPSKFSDTEQSY IFQKNANAYEQYAENTYLINKGKVASGEWIDVVRFRDWLVDTIQKNMASLMIRQKKVPYT NGGIALIVNNLNGSLIQGQQAGGIAPDERDSEGNTIPGFRITYPNAADVSADIKATRTLY IEFVALLAGAIQVVEITGSLTYSYEG >gi|333596726|gb|GL892086.1| GENE 1288 1363398 - 1363937 265 179 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAETTVSNFVPDAVESAAYRVLSQLLPVPLAYANQNNSRLPMPYATLRVSTRTAVGRDEH GEVDDEGVMPSHGVREGTVMVNVYGGSAREHCDDLINNIRKTTSRYLMRREKFIIANSAQ VNDLTGLRDEANFEAMANVDLTFRYTGRYTDNVGLIETVDATGDIGGIETHLTIAVTSD >gi|333596726|gb|GL892086.1| GENE 1289 1363930 - 1364277 117 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNPFRRPYQVFTPSPSTLVNGVIVDGVMTESTAYFSVQSIKDTQEIESLEEGRRLTDYR RLYSDTKLQITDDFPMAQPALVVIDGFNYEVKHREPWQNGIIPHYKYYVVRKRDG >gi|333596726|gb|GL892086.1| GENE 1290 1364726 - 1365133 184 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNIAAFEGLTPLEIFRKLAPEFAAVPDEVVQGYIDLASLFVCEDEYGDAYNVALALMAAH IMASPGGYSDNGSTSSGRILSRKEGDLAITYGNVSNDSSYLSGTTYGNLLQLLRKKRGAG FSIMTRGVVGGCLCP >gi|333596726|gb|GL892086.1| GENE 1291 1365133 - 1365336 216 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKITNASARLYYIAGQKLAPGQTAEVDDSWKDNKTVQASITKGELRLADKDEAVTASQVE KKEKDKK >gi|333596726|gb|GL892086.1| GENE 1292 1365369 - 1366307 798 312 aa, chain - ## HITS:1 COG:lin1726 KEGG:ns NR:ns ## COG: lin1726 COG4834 # Protein_GI_number: 16800794 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 34 312 11 301 301 97 26.0 2e-20 MEQMNYDEADLFAIEHGAAANGIRLDEGESIFLARELDYVKTKVYEVEYPALTATTLFPV TSEIPSYAKTFTYGVWDAVGMARIIADYSDDLPNVGVNYREETGKVFSLGNFYEYSLMEI RASQATGKNLPTRLANAARRAHDVKVNDLAFYGDDDYQIVGVLEHPNIPVTTSAGWTTGE IASGELEDAVSAIETITKGLHGANVIGLQPSKFKILAKAMPNTNTSYMTFFNTQYPGMQW IRVNELEDIDGAGTKAALVMERNADNASMEIPQPFEQLPPQANNLAFKIPCHSRATGVQV YLPLTLHLIKGI >gi|333596726|gb|GL892086.1| GENE 1293 1366317 - 1366826 230 169 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPVQTSYDNDMQIAMPGMRSDSTHQITDGCNAAQGAIRPGYVVARVSVANDKHVVKQVSA AGDAANLMGICRFSHYGCVTGQYEDGDAVNVMTWGRIWAVTTLSAAPTMGTGVNVLTSGA DAGKVAATGGSLALGWVFTGKFTTFKNSAGATVNLAEVQIRNQTTQPTA >gi|333596726|gb|GL892086.1| GENE 1294 1366826 - 1367926 572 366 aa, chain - ## HITS:1 COG:mlr8006 KEGG:ns NR:ns ## COG: mlr8006 COG3566 # Protein_GI_number: 13476626 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 19 351 17 364 382 141 35.0 2e-33 MKTVSRFDVGELRASVNEDGYLEDVPVVGRVGIQLYRNPDGSVRRELRPPEEVFNADSLA SFKGKPITIGHPGAVNSRNAKKHMVGTMLEPGRQDGENVKVPIMVYDENAINSATSGRTK QLSLGYRLDLDETPGEWNGQPYDAVQRNIRINHLALVSKARAGDVATLNLDGDEEITLDD DDNQPKGKTMQKLRLDNGLEYDASPEVVVAFNALKQDAEDANAKLSEAQTTISTITAERD TLKADAAEFENKLKHAREDAEKTIKARTELEAKAEKHGIKCDGLDDIAVKKAVVAKLKPS IKLDGKDDTYINVAFDMAIESAPMEQQRKIVNQDKAQTRDDSAEPKGSAAARQKYLDRLH GKKETA >gi|333596726|gb|GL892086.1| GENE 1295 1367939 - 1368745 92 268 aa, chain - ## HITS:1 COG:DRA0097 KEGG:ns NR:ns ## COG: DRA0097 COG2369 # Protein_GI_number: 15807765 # Func_class: S Function unknown # Function: Uncharacterized protein, homolog of phage Mu protein gp30 # Organism: Deinococcus radiodurans # 127 255 126 246 253 112 43.0 7e-25 MAKVWLHPYGIERDYTNALVKATRQFNREINSAYGDIRFDGWQDDMSAVLAYLRNAGNRI FQPVIERLPTFFALTSQFNDKQWRLVVKGGTGYDIPPSQAVIAGQTTVPVSSGVLGVDAY RAEPWLREMQELWVSENIRLIKSIPADELADMEGIIHRGVMNGSSADTIKKQIQERYGVT ERRAKLIAVDQIGKANSALTKQRQADAGVTGYKWRGVLDERERPEHRAREGNSYKWSKPP PDGHPGQPVRCRCYAEPDWSGSVFDIGE >gi|333596726|gb|GL892086.1| GENE 1296 1368738 - 1369178 270 146 aa, chain - ## HITS:1 COG:no KEGG:CGSHiGG_04840 NR:ns ## KEGG: CGSHiGG_04840 # Name: not_defined # Def: hypothetical protein # Organism: H.influenzae_PittGG # Pathway: not_defined # 6 105 262 367 438 61 34.0 9e-09 MDANTEKYELLNGSLEGVVDVQDRKQLRISALTGIDEQILFTKTPSGQGADKTTVPESWK QLIGRKQKDEARPAIEKVVNFLTTDKTWTIKFNPLSVPTEKEQAETANQWSQADERYSQL GWVSNDEGIATLKKRGGYVYPEMSNG >gi|333596726|gb|GL892086.1| GENE 1297 1370477 - 1371055 340 192 aa, chain - ## HITS:1 COG:XF1571 KEGG:ns NR:ns ## COG: XF1571 COG3567 # Protein_GI_number: 15838172 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 4 188 14 204 467 69 27.0 3e-12 MAKRNNRQQKKIDKKMNMDSYQNVFMNIGTGGDRSAYSRIRTAHLLTKATLDSIYLGDGL GRRIIDVVADEMFRAGFSVDGANNEPEIKSRWDELNLTQQFTDAVAWARLYGGSLMLFGV NDGKDLQSPIGEGELEFVRVYDRYQVQPFLRDTNPESATYGEITQYQINPISGTPYYVHA SRCHVFDGELAS >gi|333596726|gb|GL892086.1| GENE 1298 1371065 - 1372405 259 446 aa, chain - ## HITS:1 COG:HI1410 KEGG:ns NR:ns ## COG: HI1410 COG1783 # Protein_GI_number: 16273317 # Func_class: R General function prediction only # Function: Phage terminase large subunit # Organism: Haemophilus influenzae # 51 434 3 386 394 508 63.0 1e-143 MTKLNPVFKPFIKPHRYKVAKGGRGSGKSWSIARLLVEISRRGTYRFLCAREFQASIADS VIQLIADTIEREGYNHEFEIQKVYIRHLATNSLFMFYGIKNNITKVKSLEGIDICWVEEA EAVTKASWDVLIPTIRKPGSEIWVSYNPKNILDDTHQRFVINPPDDICLLTVNWNDNPHF PDVLRLEMEECKRKDFDLYQHIWEGQPVADSDLAIIKPSWIAAAVDAHIKLNFEASGAKR IGFDVADEGEDSNAITMAHGSVVKDVQEWSRGDVIESANRVNQYADSIAADKVIYDSIGV GAGVKAQLNRIARSQVEGFNAAAAVFEPDREYQPGKTNKDMFANLKAQAWWGVRNRFYNT WRAIEHGETFPDDQLISLSSDIKNLEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPS PNMADSLIMAFAPTSNALARLKALAS >gi|333596726|gb|GL892086.1| GENE 1299 1372392 - 1372967 180 191 aa, chain - ## HITS:1 COG:YPO0641a KEGG:ns NR:ns ## COG: YPO0641a COG3728 # Protein_GI_number: 16120966 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Yersinia pestis # 1 93 1 92 96 78 48.0 6e-15 MELTEYQKALFDDLTKLQQKFALGIVKGLSQIDAYKQAGGKAKKDETASACASEILTNPK VKAFIDEMNKEAITNAVMTRQEALERLSVMGRASLHEMVEFSEVELGTDDNGKPIIQAGW KFKDSALQSAGSLSAISELTAGKRGISIKLHDPKAAIKQLAELQGWEPPKESKLTITATK PLSELFEDDET >gi|333596726|gb|GL892086.1| GENE 1300 1373024 - 1373407 333 127 aa, chain - ## HITS:1 COG:no KEGG:SPAB_02241 NR:ns ## KEGG: SPAB_02241 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 127 1 125 125 160 65.0 1e-38 MFTVKTIINGVTHICELPTFTVARPDSERFEDILKLIDYHSSPDFAIWLPDVYADAECKN ALQEEELIVSEREGVLDYQAIAVLIEDFESPEHAKQKAFDGIRYQFIYPGDQVYVMNSHG STIETVK >gi|333596726|gb|GL892086.1| GENE 1301 1373607 - 1373909 227 100 aa, chain - ## HITS:1 COG:no KEGG:Ctu_17370 NR:ns ## KEGG: Ctu_17370 # Name: Rz # Def: endopeptidase # Organism: C.turicensis # Pathway: not_defined # 1 100 55 154 154 127 66.0 2e-28 MQTRQRDAAALDAKYTGELADAKETIERLHSDVIAGRKRLQLNASCPANGTTSSGGLGDA SGPRLTDSAERDYFTLRERIVTVTKQVGYLQDYIKEQCLK >gi|333596726|gb|GL892086.1| GENE 1302 1375263 - 1376072 223 269 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_1337 NR:ns ## KEGG: ECDH10B_1337 # Name: Q # Def: prophage antitermination protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 269 1 269 269 531 99.0 1e-149 MNLESIAKYFAPKSPMFSDSPRATSSDSLTGTDVMAALGLAGHKCGFGFDLYLSKIGISS PDIALERLYEQARKLSGKFRALSELDESARSGVLKVLCAFAYQDYSRSAASTRKCDCCDG GGFTEAQVFTNKVSYPWGKPPYWSKMSRAVRPSDWESWTQAREVVRVKCKPCNGKGVISN SCRCHGKGKVLDKAESDRQGVPVMKACDRCGGRGYARLKFSTVIEGVNTVAEIKKTAAYE QLQPLFEELVAECHKQESMADSILSKVTR >gi|333596726|gb|GL892086.1| GENE 1303 1376185 - 1376817 319 210 aa, chain - ## HITS:1 COG:no KEGG:ECL_01316 NR:ns ## KEGG: ECL_01316 # Name: not_defined # Def: bacteriophage lambda NinG family protein # Organism: E.cloacae # Pathway: not_defined # 1 210 1 210 210 333 96.0 2e-90 MRKPSRRKCKVCGEYFVPKFHDIRIRWCSPEHGAILAMEEREKEKVKSAAKRIKERKEKE RAERRDLKARKVALKTKPQWRSEAQTAFNRYVRLRDAGKPCISCGRMPEQKFGGTMDCGH YRTRGAAAHLAFNLHNTAAQCVYCNRDRDGAQKAFEQGLIERIGAEKVEAINNDNSVRRF DIQYLQRIKSIFTRKARALEKRRARRQEAA >gi|333596726|gb|GL892086.1| GENE 1304 1376810 - 1376980 82 56 aa, chain - ## HITS:1 COG:no KEGG:EFER_2709 NR:ns ## KEGG: EFER_2709 # Name: not_defined # Def: prophage protein NinE # Organism: E.fergusonii # Pathway: not_defined # 1 56 28 83 83 70 67.0 2e-11 MSTPLSRVITNEIFRVPARRKRKAAVKPSEIPTFKDYTARLVDQKWLRLAARRNHA >gi|333596726|gb|GL892086.1| GENE 1305 1376980 - 1377435 365 151 aa, chain - ## HITS:1 COG:no KEGG:SSON_2446 NR:ns ## KEGG: SSON_2446 # Name: ybcN # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 151 1 151 151 308 98.0 5e-83 MTLPVDGIKLHRGNFAAIGQQIQPLLDAGQCFRLQVKPWREKRSLSQNALSHMWYTEISE YLIARGKTFATPEWVKDAMKHTYLGYESKDRVDVVSGEVTTVQSLRHTSDLETGEMYIFL CKVEAWAMNIGCHLTIPQSCEYQQLRDKQEA >gi|333596726|gb|GL892086.1| GENE 1306 1378623 - 1379189 402 188 aa, chain - ## HITS:1 COG:no KEGG:AOLE_07425 NR:ns ## KEGG: AOLE_07425 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 11 185 6 183 346 106 34.0 5e-22 MSNSIADGAKLTPETFADFIERLKYHHRGEGVNRHATADPIFMVQKQATIYGLAEEYGES KIVHFDECEWDCPQEYWDDLDEQQQEELNAFCIDQCDTAFTDLDEDAQWEVLADLDGHTV CGTCKEWQNINAHLTREAAEAFIRRKQHDYPPLRVYVESMYFGWEYQEIIKALCDGRLVL TDSQEAAQ >gi|333596726|gb|GL892086.1| GENE 1307 1379456 - 1379773 144 105 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTDSRLQPRILRSQRRECGFNYVKQSRNFCRRHVLTTIGIHPGVFNQIFVFVAHTPTLP QTINTRFIAALFRHSWQITFVSVRCTSFEFPFGIAGMVSGAYFMP >gi|333596726|gb|GL892086.1| GENE 1308 1379617 - 1379961 155 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288549806|ref|ZP_05968233.2| ## NR: gi|288549806|ref|ZP_05968233.2| protein ren [Enterobacter cancerogenus ATCC 35316] protein ren [Enterobacter cancerogenus ATCC 35316] # 7 114 99 192 192 76 43.0 6e-13 MTITIRGQILAALRNNPGLNSGRIATMIGMTTKKISGPLSTLFADGLIEFEGKHGQRLYR LTSYGMKYAPETIPAMPNGNSKLVQRTETNVICQECRNSAAMKRVLMVWGRVGV >gi|333596726|gb|GL892086.1| GENE 1309 1379958 - 1380812 437 284 aa, chain - ## HITS:1 COG:BU021 KEGG:ns NR:ns ## COG: BU021 COG1484 # Protein_GI_number: 15616650 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Buchnera sp. APS # 69 279 34 238 246 128 35.0 1e-29 MTLDEKINQLEKRIAELSQPPVQHEDIELTISTENCETHGPFECRTRHFLNSVVKIPPRP SCCPECLKEELGRLQAERISINEAARKRNIERLLDGLSIPARFESCSLENYEPVNEEAKR ALKVCQAYASRWPERLQKGGGLVMCGKPGTGKNHLALAIARHAITEHQSSAVFTTALKIA REYKSTWSKGSSRTEDEVIRYFTKPDLLIIDEVGVQFGSDAEKLIMFEIINTRYERMKPT ILISNQTREELAAFIGERVLDRMSDGGGCTLSFTWDSYRSKGAA >gi|333596726|gb|GL892086.1| GENE 1310 1380815 - 1381684 425 289 aa, chain - ## HITS:1 COG:no KEGG:KPK_4171 NR:ns ## KEGG: KPK_4171 # Name: not_defined # Def: phage replication protein O # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 289 1 284 284 308 56.0 2e-82 MSNTAEILNFPAVVSGIQEQRVADTDDGYTRLANELYEELIGANLTKNQAKVAHAVCRKT YGFNKKMDRIADSQLSELTRLPRQKVNAAKNELIAMNVLVSDGMLIGPNKNLSEWVIPGT KPAPKCHHSSDCHHGSDSVPTVVTKSVTKTVTTLSPKWGHTKDTITKDNKDNINKPPKSP KPASFDPAGVDLPEWLSVSVWKSWVDYRRDLKKPIKSQQTVTQAINLLERCKCSGYQPEE IINQSIANGWQGLFEPKTAKQPPRAQSRVSENFAGKDYGQTEIPAWARD >gi|333596726|gb|GL892086.1| GENE 1311 1381770 - 1382312 396 180 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0574 NR:ns ## KEGG: ECSE_0574 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 180 3 181 181 251 70.0 1e-65 MHSLAYQHNTGIHPGAMINRAQAKAAPDHEKIRDAVRAWSSALDNQDVVSALIINEYREQ GGTAISFPEDISRARQKLFRFLDNRFDSEQYRENVRQLTPAIMAVLPVEYRTRLIGADCK MSRLAEAEKELAEAKQAVLLDAPEHQKLKEVSEGIASLFRLMPEQVGPLMTMVTSMLGVI >gi|333596726|gb|GL892086.1| GENE 1312 1382343 - 1382558 180 71 aa, chain - ## HITS:1 COG:no KEGG:YPK_1211 NR:ns ## KEGG: YPK_1211 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 71 1 71 71 91 57.0 1e-17 MNNIANERKKLGITQSELAGSCGWNQSRLANYEAGIRAPDLDSCRRLVDAMNKLGSNTSL DALFPPKNNAA >gi|333596726|gb|GL892086.1| GENE 1313 1382668 - 1383303 226 211 aa, chain + ## HITS:1 COG:Z3358 KEGG:ns NR:ns ## COG: Z3358 COG1974 # Protein_GI_number: 15802659 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 EDL933 # 5 207 6 208 215 174 46.0 2e-43 MNRIEDIAGRIKRLREDKGLSQKALAELCGWASQSRIGNYESGTRSVSVDDATVIAKALG VAPAELLFGDDYKGPYKPGDKYPVISKVQAGAWCEAVEPYTLKDIDLWLESDAHIQGEAF WLQVDGDSMTAPAGLSIPEGTFVLFDTGREAINGSLVIAKLSDSNEATFKKLVIDGGQKY LKGLNPQWPLVPINGNCRIIGVAVETKLRLV >gi|333596726|gb|GL892086.1| GENE 1314 1383861 - 1384478 128 205 aa, chain + ## HITS:1 COG:no KEGG:Mlg_2307 NR:ns ## KEGG: Mlg_2307 # Name: not_defined # Def: hypothetical protein # Organism: A.ehrlichei # Pathway: not_defined # 7 143 12 150 204 128 45.0 2e-28 MKRYSLCPICGDEGLHETKTKILREFEGFKKEVPFHASVCESCGSETLTVQQAKFNKRQM TDFYREADGLLTGGQIKAIREDLHLTQSEAAIIFGGGKNAFTKYENGDVTQSFALDKLLR TAYSVPAAFEFLRKGCPAVTTVEYTNRTTELEMIKTYLVSKTGHLKYAKSPAEDSVKVVI QNYVSEPTQHNTWHMIETIALGSKL >gi|333596726|gb|GL892086.1| GENE 1315 1385157 - 1385354 155 65 aa, chain - ## HITS:1 COG:no KEGG:ECL_03589 NR:ns ## KEGG: ECL_03589 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 64 1 64 69 78 67.0 9e-14 MVLDEERISMKIQAMGRAVMELSLADLPMTQQNIIDKLKQYRKETGNVIGKGVNRDAAEI VRKGL >gi|333596726|gb|GL892086.1| GENE 1316 1386254 - 1386817 -21 187 aa, chain + ## HITS:1 COG:no KEGG:YE2335 NR:ns ## KEGG: YE2335 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 6 186 15 170 176 88 33.0 1e-16 MNWSNYFTYDPKLGLLRWKQRPADIDDSAAKIRSWNKRYAGKEAGTTRTDGYIAVEIVFL KRKIKAHRIIWEMHNGPIPDGLVIDHINRNRSDNRLENIRVVTRRDNFLNSERFDGKPIP PIKTDEHRTFKKQRTHAKGTSKLKLSRPKPWSAKIWVDGRNVSLGYYATESEASAAYQAA VAKYRNN >gi|333596726|gb|GL892086.1| GENE 1317 1386853 - 1387215 192 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|167465269|ref|ZP_02330358.1| ## NR: gi|167465269|ref|ZP_02330358.1| hypothetical protein Plarl_22373 [Paenibacillus larvae subsp. larvae BRL-230010] # 25 114 11 116 117 97 52.0 4e-19 MSTGIGNHEFSTNYRNIYKPDLAICPYCGFESCEADHCDVGIGMVQCGPYYCPQCCASEI SSLDTRELTDREKETGWFKPDSPVSDVANTVNGQLVNHKEAKQAYDIGLLDVKKLDREAS >gi|333596726|gb|GL892086.1| GENE 1318 1387212 - 1387370 132 52 aa, chain + ## HITS:1 COG:no KEGG:ECL_01298 NR:ns ## KEGG: ECL_01298 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 52 1 52 52 83 90.0 3e-15 MTVTHNGKQYIAKKLNDNEWQLTSVSAPREKLLLNRWQMHIAGLLEQVEVKV >gi|333596726|gb|GL892086.1| GENE 1319 1387367 - 1387576 232 69 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_1323 NR:ns ## KEGG: ECDH10B_1323 # Name: kil # Def: FtsZ inhibitor protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 69 1 69 69 135 95.0 5e-31 MINHYGTTPLIRQCVTPGMMAMHEGRTYRVSAVIQERKWVYLHTDAEIIRLSDCVIDVLL DGHGNPIQH >gi|333596726|gb|GL892086.1| GENE 1320 1387647 - 1388618 1076 323 aa, chain + ## HITS:1 COG:NMA0905 KEGG:ns NR:ns ## COG: NMA0905 COG3468 # Protein_GI_number: 15793871 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis Z2491 # 12 284 971 1291 1773 59 29.0 9e-09 MSEVTDLTVIEIKPEQAPVLYVAGGLDAYLEQIRQAVNEVPDLSTKKGRDRVASLAAQVS RSKTAIEKPGREYLKRLKEAVRPAEAEIKRFVDACDELRDATRRPLTEWEAEQERIKAEE AMNALHAEALVMNEEFDRQRAAQIEADHEMALLMNDKFDRDREEQRRQAEQAQRERDERL KQEAAEQARRDAEAKHKAEIEAAARREAEEKARAELAERQRVEAEQRAAREKQEAEARAE REKAAAVEAERLKAKQAEEARQAEEKRKADEQAKREADVKHRKTVGTNIVNALTSYTSLT REQAIEVLTALKDDLIPCAKIHY >gi|333596726|gb|GL892086.1| GENE 1321 1388627 - 1388824 253 65 aa, chain + ## HITS:1 COG:no KEGG:KPK_4181 NR:ns ## KEGG: KPK_4181 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 10 65 1 56 56 73 71.0 2e-12 MNITCECVDMRTSVGPHNTIKVEMEGVVLAGTVKTRDVLPQLDGAEVIEWLAEQGYVITH QERAA >gi|333596726|gb|GL892086.1| GENE 1322 1388821 - 1388979 111 52 aa, chain + ## HITS:1 COG:no KEGG:KPK_4182 NR:ns ## KEGG: KPK_4182 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 51 1 51 52 62 62.0 6e-09 MTAAERWDEESFLRLMRDVIPEKPENDDEPVSLAAERQNPVISWDEFAGNYT >gi|333596726|gb|GL892086.1| GENE 1323 1388976 - 1389701 349 241 aa, chain + ## HITS:1 COG:L49824 KEGG:ns NR:ns ## COG: L49824 COG4712 # Protein_GI_number: 15673404 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 6 164 11 170 252 162 52.0 6e-40 MNLDDLDAPFASEDIEWRIQQAGKNNNGIWAKVLAYVTNRAIMKRLDEVCGKAGWRNEYR DIPNNGGVECGISIKVEGEWITKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLE EGFAVVSATRAPGFQYAKSKEVGVFYWKAPALPGWALPSGTPIERGQQPHDGHQQRDQAT QSVDADKILAEFSAYAGSENDSERLKHRYEDTWKLLNGFTEHQNKCKDVTGIRLKELKQA A >gi|333596726|gb|GL892086.1| GENE 1324 1389702 - 1390199 253 165 aa, chain + ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 165 1 178 178 237 77.0 6e-63 MASKGVNKVILVGNLGQDPEVRYLPSGGAVCSVTLATSESWRDKATGELKEQTEWHRVVL FGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQAGVEKYTTEVVVNVGGTMQMLGGRQGGG AAPAGGSPVQGGNQFSGGAQPRTQQQSAPAQSNEPPMDFDDDIPF >gi|333596726|gb|GL892086.1| GENE 1325 1390225 - 1390446 89 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|261340390|ref|ZP_05968248.1| ## NR: gi|261340390|ref|ZP_05968248.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] # 1 73 1 73 73 98 84.0 2e-19 MNKFTPEYRKYLLRPIPDRKLSPAERADRKELYQIIQQERANDDSPPSPSNYTPADPYLN DNRKGLGGASRSD >gi|333596726|gb|GL892086.1| GENE 1326 1390688 - 1391356 349 222 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02759 NR:ns ## KEGG: ACICU_02759 # Name: not_defined # Def: phosphoadenosine phosphosulfate reductase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 211 29 238 284 254 58.0 2e-66 MLIKLLEVIPPKQIVVVHASLGAMEWPGALELAEKQAGGSGLPFIVARARKTLLEMVERR FANRPEVPSWPSASTRKCTSDLKRGPIQREVRAYAKANGFKVIVNCLGLRAQESPGRAKR QVFRKNETDSNSVLTWYEWLPIHELKVEEVFASIREAGQEPHYAYALGNERLSCVFCIMA SRNDLRNGGRHHPELLEQYAALEAHTGYTMHMNRIPIKELAA >gi|333596726|gb|GL892086.1| GENE 1327 1391353 - 1392012 696 219 aa, chain + ## HITS:1 COG:all7280 KEGG:ns NR:ns ## COG: all7280 COG4725 # Protein_GI_number: 17233296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Transcriptional activator, adenine-specific DNA methyltransferase # Organism: Nostoc sp. PCC 7120 # 1 197 6 190 210 72 27.0 8e-13 MTGKYSLIYADPPWSYGNTISNGAAADHYSTMKLIDIKRLPVWELAAENAVLAMWYTGTH NQEAIELAEAWGFAVRTMKGFTWVKLNQNAELRINKALAEGEITDFYDFLDLLNAETRMN GGNHTRANTEDLLIATRGAWLERKHAGIKQVVYSPLGAHSEKPWEVRHRLELLYGDVPRI ELFSRCAAPGWHHWGNQCATAAVELLPGCAIDAVKKEAV >gi|333596726|gb|GL892086.1| GENE 1328 1392009 - 1392227 89 72 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1001 NR:ns ## KEGG: Ent638_1001 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 68 1 68 71 68 47.0 6e-11 MTPETDNAIRAACRRCTEEIQQAMRKKPKPNWNETVPPIINKHHKKIEALGVSLLEFVVY TGRLNKRFGVEQ >gi|333596726|gb|GL892086.1| GENE 1329 1392723 - 1393040 223 105 aa, chain + ## HITS:1 COG:no KEGG:SPAB_02271 NR:ns ## KEGG: SPAB_02271 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 100 2 101 108 154 75.0 9e-37 MTTEFKALPVERNQYGYWTHPLYDEFCDGRESISPIEFNAWLEKNGLEWKVIYRDEDDVD PDVDGYDISSWQPETPAGGGWFVGSIHDTEDGAVCIWLRHAGGAE >gi|333596726|gb|GL892086.1| GENE 1330 1393004 - 1393228 98 74 aa, chain + ## HITS:1 COG:no KEGG:ECSP_2753 NR:ns ## KEGG: ECSP_2753 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 12 70 1 59 63 70 64.0 2e-11 MHLAAARWRCGMNRASPVDLRKSLDIANHLAHIGIRFVPIPVATEEEFQTLAAELSRRLE QMAVEAEKNEGGAA >gi|333596726|gb|GL892086.1| GENE 1331 1393617 - 1394009 124 130 aa, chain + ## HITS:1 COG:no KEGG:SSPA2243 NR:ns ## KEGG: SSPA2243 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 119 1 112 113 131 53.0 9e-30 MDYSKLGDFEINKLVGDVVFKGLWSCRPGTAGNKSDSWYYGNADASLNPLSPLPDYCNDA AAAWPIITANKISIYAMSEADKRGGWGAEAFHPNDAYSFNDNPLRAAMIVFLMMQESANV PANSTGSDLR >gi|333596726|gb|GL892086.1| GENE 1332 1394261 - 1395013 386 250 aa, chain + ## HITS:1 COG:no KEGG:Varpa_1984 NR:ns ## KEGG: Varpa_1984 # Name: not_defined # Def: type I restriction-modification system methyltransferase subunit-like protein # Organism: V.paradoxus_EPS # Pathway: not_defined # 2 246 8 249 255 244 51.0 4e-63 MRVDNEVLNVLSAAECNGPQLFLTGQLDRNLYTRTNKVLEAAGGKWNRKAKAHIFDTDAS DRIEQIILTGDVVVPKDDFEFFPTPPAVAERVIELADIQNGMRVLEPSAGKGALALAAQQ SALDVKVDMFELMPENNAHLHSMNIKNAKIGDPIDFLSVEPMASFDRIVMNPPFGRQADI KHVSHALKFLKPGGLLVSVMASSVTFRSNKLTTDFRQLIEERGGHIEELPEGAFKSSGTM VNTVIVVIPG >gi|333596726|gb|GL892086.1| GENE 1333 1395335 - 1396498 206 387 aa, chain + ## HITS:1 COG:intD KEGG:ns NR:ns ## COG: intD COG0582 # Protein_GI_number: 16128520 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 387 1 387 387 473 62.0 1e-133 MSITLRGGVWHCHFVTPSGKRIRRSLGTGDKKQAQELHDKLKAEAWRVDKIGELPTRTFE ECCIRWIREKEHKRSLDDDKTKIEYFLRHFSGRDISTITADQVHEAVSKMVNRKHIQVWE SRRDAAIRRGKEPPPYAEKPVSQATKSQHLSFMRSLFKAAANDWGWIKTAPVIKTKKPIS KRIRWLTRDEAERLISCMPESIKPVVIFALATGLRRSNIIDLEWQQVDMQRKVAWVNPEN AKAGKAIGVALNDTACRVLRDQIGKSSRWVFVHTKPSTRPDKTVTPAVRKMRVDDNVAWR IGLERAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLSEH ARKIDAIFGNHDTNTTQGENQAGLKLA >gi|333596726|gb|GL892086.1| GENE 1334 1397146 - 1397556 70 136 aa, chain + ## HITS:1 COG:no KEGG:ECL_01286 NR:ns ## KEGG: ECL_01286 # Name: not_defined # Def: diguanylate phosphodiesterase # Organism: E.cloacae # Pathway: not_defined # 2 136 98 232 232 178 67.0 5e-44 MFQRLLQLNSPPLNIELVEPASFFSLSDPARLRVSCALQQLTAQGHRIWLDDIDEASGRA FLACRLPLSGIKIDKIAFWRLRATPALTQLVTLCSKIATNVLIEGIETERDRACALQAGA RFGQGYYWPSWRWQED >gi|333596726|gb|GL892086.1| GENE 1335 1397581 - 1398297 307 238 aa, chain + ## HITS:1 COG:no KEGG:ECL_01285 NR:ns ## KEGG: ECL_01285 # Name: not_defined # Def: response regulator receiver protein # Organism: E.cloacae # Pathway: not_defined # 14 235 14 235 240 330 75.0 2e-89 MRMTVRRYRRRRTGSDSLGSTHSPFALPFFDRLEYLSQSINQTRKTDAPFIILVTQDNFF RSGFLSGQSPLSNCCDYSTLDAALSDLNHWPSSRLVVDIESRASPLIDLLDRLRRHSLFA PYLTPYLLVRADDYDARLFCKAAGPFHVLERQLTALAMQQTLLEAPSPPGHRKEWFSRDE WPILQALSQGSSLRQIAQLQNRPYSRIIYRLSCILAKLGLNHRHELLHLLNNLSDFTY >gi|333596726|gb|GL892086.1| GENE 1336 1399107 - 1399739 452 210 aa, chain + ## HITS:1 COG:STM0549 KEGG:ns NR:ns ## COG: STM0549 COG2197 # Protein_GI_number: 16763929 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 210 1 210 210 311 77.0 7e-85 MKPASVIIMDEHPIVRMSIEVLLQKNKNIQVKLKSGDSHEVLDCIRNHPIDLVILDIETT GTDGFVLLKRIRNLNKDIKVLFLSSKSEAFYAGRAIRAGANGFVSKRKDLGEIYNAVEMI LTGYSFFPSETLSFINHLGSRTGAAVDMPLSNREVTVLRYLANGLSNKEIADQLLLSNKT ISAHKSNIFSKLGVQSIVELIDYAKAHELL >gi|333596726|gb|GL892086.1| GENE 1337 1399790 - 1400311 435 173 aa, chain - ## HITS:1 COG:STM0548 KEGG:ns NR:ns ## COG: STM0548 COG3539 # Protein_GI_number: 16763928 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 8 173 8 172 172 182 56.0 3e-46 MRNGMRCLAVALFALCPHAYAETALGEINIQLYGNIVDFTCVAEGDDSNKTVTLGTWPTK QLRTTGSRTQPVPFTLKLTGCPPGAASVTFTGKVDGHDNSLLALNDASAASNVAVEILDR DKTRLALQQASQTVSVDAQGNAELSFYANYIATADNPQPGRADADATFMINYN >gi|333596726|gb|GL892086.1| GENE 1338 1400321 - 1401328 1063 335 aa, chain - ## HITS:1 COG:STM0547 KEGG:ns NR:ns ## COG: STM0547 COG3539 # Protein_GI_number: 16763927 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 20 335 20 335 335 447 70.0 1e-125 MNKIHYLGLSLLAFLPVSAAFATVCVNENGVPTEVYYDLTDKFNSSNNQVGQVVTLSEKS QWVGVNAVCPKGTIGNTTKRSYVTDFPVTGTSDGYQYLKLNDYLDGAMKITDSSTGTFYP PKKYIQMGSHPNVSKNKPFGVQDSSLVFRLKVTRRFINMVVIPRATMFRVYVTTTSSDPL TTPVYTISYSGTIQVPQSCEINAGNVVEFDFGDIGASLFSKAGIGNKPEGVSAQSKTIGI KCTNVEANAMLTMRVEAEKVSGSTLVSDNADVGFVIANSNGVPLTPNNLTSKIPFRLDDS AQAQVGIRAWPVSVTGKKPAEGRFTSRGYLRVDYD >gi|333596726|gb|GL892086.1| GENE 1339 1401321 - 1403879 2817 852 aa, chain - ## HITS:1 COG:STM0546 KEGG:ns NR:ns ## COG: STM0546 COG3188 # Protein_GI_number: 16763926 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 10 851 21 865 870 1242 74.0 0 MNTQWRYCPVALALMATLWPQAGWGESYFNPAFLSDDAANVADLSRFEKGHQQAPGVYRV DIWRNDEFIGTQDVRFEQADNTPPVAGGLSPCITRAMLDRFGVNIAAFPELSNVQGDTCV PLTTAIPGSETAFNFASLRLNVSLPQVAMQNSARGYIPPEQWDEGIPAALLNYSFTGNRG SDDDSYYLNLQSGLNYGAWRLRNNGAWRYTDSNGQRHSSWQNIGTWAQRTIIPLKSELVL GDSNTGNDVFDSVGFRGGRLYSSDSMYPDSLQGYAPTVRGIARTPAKVVIRQNGYVIYQS YVQPGAFAITDLNPTSSSGDLEVTVEEKDGSQQRYTVPYSTVPLLQREGRWKYDLVAGDY RSGNSEQDTPFFAQGTMIAGLADGYTLYGGTQLASRYTAIAIGAGKNLGDWGAVSLDLTH ARSQLADDSRHEGQSLRFLYAKSLNGFGTNFQLLGYRYSTKGFYTLDDVAWRTMEGYQYG DDQDDDGVPDVQSYHNLTLNKKGRFQLNISQSLGDYGSLYVSGSQQSYWGTSESNVWYQL GYAGGVKGISYALSWSWNKSVGIDGTDRIASFNVSVPFSLFTRHGYRRDSAIDRAYATAS ASRNSDGDTSWQTGISGTLLQDRNLNYSVTQGHTSNNGASGSASANWQATYGTLGVGYNY TRDQHDLNWQLSGGVVGHSDGITFSQPLGDTNVLIKAPGASGVSVENQTGVKTDWRGYAV MPYATVYRYNRVALDTNTMSNNTDIENNVSSVVPTNGALVRASFDTRIGVRALLTVKRDN QPVPFGAVVRETKSGVTSMVGDDGQIYLSGLPLSGELLIQWGDGKQSQCRAPYSLPEQSL QQAITLKGIRCE >gi|333596726|gb|GL892086.1| GENE 1340 1403894 - 1404541 866 215 aa, chain - ## HITS:1 COG:STM0545 KEGG:ns NR:ns ## COG: STM0545 COG3121 # Protein_GI_number: 16763925 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 1 215 15 229 230 281 68.0 7e-76 MMISATANASGGIALGATRVIYPADAKQTSLAITNSNKQERYLINAWIENANGQKEKTFA VTPPLFVSEPASENTLRIIYAGPALPADRESLFYMNVKAIPSVSKKHQDGNNVLQLAILS RIKLFVRPASLAMPPEEALSQLRFERVGNHLKVSNASPYYVTLVNLKLGGQTLDNLMVAP KSSAQQVLPTAASGTLSWQSVNDYGAITPARSVSL >gi|333596726|gb|GL892086.1| GENE 1341 1404621 - 1405163 175 180 aa, chain - ## HITS:1 COG:STM0544 KEGG:ns NR:ns ## COG: STM0544 COG3539 # Protein_GI_number: 16763924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 180 1 177 177 220 60.0 1e-57 MTRTGILLCALAIAPAVNAHTVVIDGGKVHLRGELVNGGCAVAPDSQNMRVDMGQYRTNA FSGVGSFSTVNVPFTVRLLDCSVDVSRTVGIQFQGVTPAEDPQVFLATSRPGENAVSSGV GLALFDEQQRQIIPNATAVSWLPINTRELAFHFSARYRAISEHLVPGTIQSNVWFTLIYP >gi|333596726|gb|GL892086.1| GENE 1342 1405233 - 1405796 685 187 aa, chain - ## HITS:1 COG:STM0543 KEGG:ns NR:ns ## COG: STM0543 COG3539 # Protein_GI_number: 16763923 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 6 187 5 185 185 190 68.0 1e-48 MKLSNIASTVIATLALVAGAAHAEDPVAPVSVNGGTVHFKGELVNAACSVNTDSSEQTVN LGQYRTAKFTKVGDTTSNIPFTIELNDCDPAVAKTAAVAFTGQIDATDKTLLAVSSGNND NSAKGVGIEILDSKSTTLTPDGATFSAAQSLIEGTNTLNFTARYKATAATTAPGQANADA TFVMKYE >gi|333596726|gb|GL892086.1| GENE 1343 1406107 - 1406973 1133 288 aa, chain + ## HITS:1 COG:folD KEGG:ns NR:ns ## COG: folD COG0190 # Protein_GI_number: 16128513 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Escherichia coli K12 # 1 287 1 287 288 536 94.0 1e-152 MAAKIIDGKTIAQQVRSEVAEKVKARKAAGFRAPGLAVVLVGSNPASQIYVGSKRKACEE VGFVSRSYDLPETTSEAELLELIDTLNADKEIDGILVQLPLPAGIDNVKVLERIAPDKDV DGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTYGLNAVVIGASNIVGRPMSMELL LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGEWIKEGAIVVDVGINRLENGKV VGDVVYEDAAARASYITPVPGGVGPMTVATLIQNTLQACEEYHDVEDA >gi|333596726|gb|GL892086.1| GENE 1344 1406976 - 1407188 319 70 aa, chain + ## HITS:1 COG:ybcJ KEGG:ns NR:ns ## COG: ybcJ COG2501 # Protein_GI_number: 16128512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 70 8 77 77 119 91.0 1e-27 MATFSLGKHPHVELCDLLKLEGWSESGAQAKIVIADGQVKVDGAVETRKRCKIVAGQTVS YAGQSVTVTA >gi|333596726|gb|GL892086.1| GENE 1345 1407474 - 1408973 2054 499 aa, chain + ## HITS:1 COG:BH0844_1 KEGG:ns NR:ns ## COG: BH0844_1 COG1263 # Protein_GI_number: 15613407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 7 412 2 415 424 385 47.0 1e-106 MSLISGFVKSLSKLSMIGRALMLPISLLPAAGLLLAFGDKFHLPLMMNAGGVIFDNLPML FAIGSAVGLASESGIAALSAAVSVFVTNITISTVLSITPEMASQGGKYAMVVGIPTLQMG VFGGLICGILAAWCYNRFHTMQLPEFLGFFSGKRFVAIATAFLSFLLGLLLPYVWQHIQS GIDALSVVVNGDNQAASTFIFGLVERALIPLGLHHIWYPSFWYSFGDYTTQAGQVIHGDQ TIWFKMLEEGVKSFSSDTYQNAGKFMQGEFPLMLFALPAACLAMYYEAHTKNKKIAAGIL FSAALTCFLTGITEPVEFTFIFVAPILYVFNAIMAGLAYMTMYLLHAHIAKSFSAGFIDY LSFGILPSFNGYQTNFLSAIIIGIPMALIYYFTFRFVIRRFDVKTPGRTEVTASANDKSD SELATEIIGLLGGAQNIDSVGSCITRLRLEVAKSDAVDRDGLNGLGARGVVFVGDNGIQV IFGARAQFIAQTMSTMIGK >gi|333596726|gb|GL892086.1| GENE 1346 1409057 - 1410073 806 338 aa, chain + ## HITS:1 COG:ECs2328 KEGG:ns NR:ns ## COG: ECs2328 COG1609 # Protein_GI_number: 15831582 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 2 334 5 340 342 191 35.0 2e-48 MKKVSIIDVAKHAGVSVSTVSLVLRQKGKISEATIGKVNAAITTLGYIHNVAAANLRANT SNLIGLILRDFSDSFSIKVMASIVQELEKQGYMVFLGQPLNDGEHLERTLLSFKQQGVAG VIYLASDTRAASLPEHIRHCPLPLVAVSQSLLEEKCNLVMRDNRQAANLAARYLIERGHR NIAYIGGRDGCRIREQRLLGFRSAMTQNGLVWREEYSPACTDDTQAAAMATRQLLEKNNT ITALLCHSPDAMLGSISGIHQVGRTVGKDVFLTQQVALIGFEDMLHVNLTSPSLTYVSSA SEETGRQAAGLMIRRLKEPDLQTQRITLSGQLIARESA >gi|333596726|gb|GL892086.1| GENE 1347 1410147 - 1410671 456 174 aa, chain + ## HITS:1 COG:ybcI KEGG:ns NR:ns ## COG: ybcI COG1988 # Protein_GI_number: 16128511 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 173 1 173 173 270 88.0 1e-72 MPTVITHAAVPLCLGLGLGTKVIPPRLLFAGIVLAMLPDVDVLAFKFGVAYGNIFGHRGF THSLLFAFILPILCVLAGRRWFRASLTRCWLFLTVSLLSHSLLDSITTGGKGVGWLWPWS DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELLWVWLPGMVLMGVLWWKKRR >gi|333596726|gb|GL892086.1| GENE 1348 1410758 - 1412122 1853 454 aa, chain - ## HITS:1 COG:STM0537 KEGG:ns NR:ns ## COG: STM0537 COG0215 # Protein_GI_number: 16763917 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 454 8 461 461 860 93.0 0 MTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNLKYVRNI TDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDSEPRATHHIHEIIEITEK LIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVVDVKRNPMDFVLWKMS KAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHG GEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEE NLKQARAALERLYTALRGTDRSVPAAGGEAFEARFVEVMNDDFNTPEAYSVLFDMAREVN RLKSEDMAAANALASHLRKLSSVLGLLEQEPDVFLQSGAQADDGEVAEIEALIKARLEAR QAKDWAAADAARNRLTEMGIILEDGPQGTTWRRK >gi|333596726|gb|GL892086.1| GENE 1349 1412319 - 1412813 617 164 aa, chain + ## HITS:1 COG:STM0536 KEGG:ns NR:ns ## COG: STM0536 COG0652 # Protein_GI_number: 16763916 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Salmonella typhimurium LT2 # 1 164 1 164 164 316 95.0 1e-86 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMR QKETKEAIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVADNDFLNFSGESLQGWGY CVFAEVVEGMDVVDKIKAVSTGRSGMHQDVPKEDVVITSVTVSE >gi|333596726|gb|GL892086.1| GENE 1350 1412817 - 1413539 773 240 aa, chain + ## HITS:1 COG:ybbF KEGG:ns NR:ns ## COG: ybbF COG2908 # Protein_GI_number: 16128508 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 1 240 240 417 82.0 1e-117 MATLFIADLHLQTEEPAITAGFLRFLRGEAKSADALYILGDLFEAWIGDDDPNPLHRDMA AAIKALVDSGVPCYFIHGNRDFLIGQRYARESGMTLLPEEQVLDLYGRNILIMHGDTLCT DDTGYLAFRAKVHTPWIQKMFLALPLFIRNRIAARMRAGSKAANSSKSMTIMDVNPQAVV NVMEKHRVQWLIHGHTHRPDVHSLIANGEPAHRVVLGAWHREGSMVKVTPEGVELIAFPF >gi|333596726|gb|GL892086.1| GENE 1351 1413659 - 1414168 541 169 aa, chain + ## HITS:1 COG:ECs0585 KEGG:ns NR:ns ## COG: ECs0585 COG0041 # Protein_GI_number: 15829839 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 271 97.0 4e-73 MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEE NGYEVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLA IGKAGAANAALLAAQILATHDKDLHQRLAEWRKAQTDEVLDNPDPRGAA >gi|333596726|gb|GL892086.1| GENE 1352 1414165 - 1415232 1438 355 aa, chain + ## HITS:1 COG:STM0533 KEGG:ns NR:ns ## COG: STM0533 COG0026 # Protein_GI_number: 16763913 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Salmonella typhimurium LT2 # 1 355 1 355 355 644 86.0 0 MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPEAVPFHQSVITAEIERWPETALTR ELARHNAFVNRDVFPIIADRLTQKQLFDKLGLATAPWQLLSDKSEWNDVFAMLGELAIVK RRVGGYDGRGQWRLRAHDTAELPDNCYGECIVEQGINFSGEVSLVGARGHDGRTVFYPLT HNLHQDGILRTSVVFPQANADQQAQAEEMLSAIMHELGYVGVMAMECFVTPSGLLINELA PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVTSPSVMINLIGTDLNYNWLKLPLV HLHWYDKEVRPGRKVGHLNLNDTDTDRLSATLEAIVPLLPPDYASGIVWAQSKLK >gi|333596726|gb|GL892086.1| GENE 1353 1415317 - 1416387 1223 356 aa, chain + ## HITS:1 COG:STM0513 KEGG:ns NR:ns ## COG: STM0513 COG2603 # Protein_GI_number: 16763893 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Salmonella typhimurium LT2 # 6 355 9 362 364 530 72.0 1e-150 MNDGTDYRAILASDTPIIDVRAPIEFAQGAMPAALNLPLMNDDERAAVGTCYKREGPEAA LTLGHRLVNGETREARINAWREASLAHPEGYLCCARGGQRSHISQAWLKETGVDYPLIRG GYKALRQTAIQVTVEQSQKPMVLIGGCTGNGKTLLVKQHVQGIDLEGLAHHRGSSFGRTL TPQLSQASFENHLAVELLKKDAARWVLEDEGRMIGSNHLPECLRDRMADAPIVVVEDPFE IRLERLREEYFDHMWADFSAAYGEEAGWKAYSEYLHHGLFAIRRRLGLQRFAEFTALLDA ALAEQQRTGCTDAHFSWLAPLLKDYYDPMYSYQLDKKAEKIVYRGTYEEIAEWLER >gi|333596726|gb|GL892086.1| GENE 1354 1416475 - 1417620 1669 381 aa, chain - ## HITS:1 COG:STM0509 KEGG:ns NR:ns ## COG: STM0509 COG3203 # Protein_GI_number: 16763889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 381 1 377 377 610 84.0 1e-174 MTIRKTALATTIGAAVALASFASQAEITLLKQDPQAGNPLSRLNFTVGGSIRPQFQNMTG DDGKNGYKRNGFDGGTRFRFAADYYLFDDISWITYYELGVNIPAQFNWDNHYADGAHDTS RRMLYTGLKSDTWGTLTFGQQNSVYYDVVGAKTDIWDYDMIGQAPGNGINGDYDGSYRSR QMLKYKKTVGDADIYASYLFEDSEYLPGNGLRYKRKGGGSLGIDYHLTTDLTWGAAWNYT RADMRNPDNGDSKSYDQNILGTALSWTPDNWTFSAGGGWYQNFMTTKKVSVNDYFAGDAW GIEYFAGYKFPVGQYAVKSIQPYFMGDRIEYVNGRNYQRIDNGVGISFQLDYGFRVDYEH VFTSSTDNLGDMNLVRLRYDF >gi|333596726|gb|GL892086.1| GENE 1355 1417803 - 1420217 3073 804 aa, chain - ## HITS:1 COG:ECs0559 KEGG:ns NR:ns ## COG: ECs0559 COG3127 # Protein_GI_number: 15829813 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Escherichia coli O157:H7 # 1 802 1 802 804 1246 85.0 0 MIARWFWREWRSPSLLIVWLALSLAVACVLALGSVSDRMEKGLSQQSREFMAGDRTLQSS RPVPPGWIEAARKEGLKVGEQITFQTMTFAGDTPQLASVKAVDDIYPMYGDLQTSPPGLK PTPGTVLLASRLMALLNLKPGESIDVGDATLKIAGEVVQEPDSGFNPFQLAPRLLMNTAD VAKTSAVQPGSRVTWRYKFGGTPAQLEAYEKWLLPQLKPEHRWYGLEQDEGALGKSLERS QQFLLLSALLTLLLAIAAVAVAMGHYCRSRYDLVAILKTLGAGRAQLRRLIVGQWLMVLA LSAITGGAIGLLFEKLLMVLLKPVLPAALPPASLWPWLWAIGAMTTISLLVGLRPYRLLL ATQPLRVLRRDVVANVWPLKVYLPVIIAVAVALLAWLMGGSTLLWAVLAGAVVLALLCGA LGWLLLSLLKKLTVKSLPVRLAVNRLLHQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIAPEQVTPLKGFLSEHHIIPESFYPIVRARLTQINGQSTEGNKD ESLNRELNLTWQEKRPDHNPITAGTWPPKAGEVSMEEGLATRLNVKLGDSVTFTGDTQDF TAKVTSLRKVDWESLRPNFFFIFPPGALDGQPQSWLTSFRWENGNGMLTQLNREFPTVSL LDIGAILKQVGQVLEQVSRALEVMVVLVTICGVLLLLAQVQVGMRQRHQELVVYRTLGAS KRLLRATLWSEFALLGLVAGLVAAIGAETALAVLQNNVFDFPWEPDWRLWVTLPVCGAVL LSLCGGWLGTRLLKGKALFRQFVS >gi|333596726|gb|GL892086.1| GENE 1356 1420214 - 1420900 312 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 25 228 20 223 223 124 37 1e-26 MPAENIVEVHRLKKSVGQGEHELSILTGVELVVKRAETIALIGESGSGKSTLLAILAGLD DGSSGEVNLVGQPLHALDEEARAALRARHIGFVFQSFMLIPTLNALENVELPGLLRGENT RESRDHAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPEVLFADEPTGNLDRK TGDKIADLLFSLNREHGTTLILVTHDPQLAARCDRRLRLVNGVLQEEA >gi|333596726|gb|GL892086.1| GENE 1357 1420634 - 1421503 575 289 aa, chain + ## HITS:1 COG:tesA KEGG:ns NR:ns ## COG: tesA COG2755 # Protein_GI_number: 16128478 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Escherichia coli K12 # 80 286 2 208 208 395 92.0 1e-110 MPGTQRGAGLFIKRVERLADQVHFTTAAIVQTGENSQQRGLTGTGFANQGDGFGTFDNEF NSGEDGKLVFSLTDGLLKTMNFNNVFRWHLPFLFLMLMTFRAAAADTLLILGDSLSAGYR MAASAAWPALLNDKWQSRTTVVNGSISGDTSQQGLSRLPALLKQHQPRWVLVELGGNDGL RGFQPQQTEQTLRTILQTIKAANAQPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDIPL LPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMATRLAPLVKHDSSNS >gi|333596726|gb|GL892086.1| GENE 1358 1421523 - 1422293 230 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 255 3 249 259 93 30 4e-17 MQKSVLITGCSSGIGLESALELKRQGFWVLAACRKPEDVERMRGLGFTGILLDLDSPESV EQAADEVIALTNNRLYGLFNNAGYGVYGPLQTLSREQLEQQFSANFFGAHQLTMRLLPAM LPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIR TRFTENVNQTQADKPVENPGIAARFTLGPEAVVAKVRHAFESDTPKMRYPVTLVTHAVGW LKRLLPGRMMDKILQG >gi|333596726|gb|GL892086.1| GENE 1359 1422352 - 1423206 1277 284 aa, chain + ## HITS:1 COG:ECs0555 KEGG:ns NR:ns ## COG: ECs0555 COG3118 # Protein_GI_number: 15829809 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Escherichia coli O157:H7 # 1 284 13 296 296 439 89.0 1e-123 MSVQNIVNITEANLQQTLEQSMTKPVLFYFWSERSQHCLQLTPVLESLAAQYNGQFILAK LDCDAEPMVASQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQE AMALMQEGKYDEALPLLKDAWQLSNQNSQIGLLLAETQIALHRPEDAEAVLKTVPMQDQD TRYQGLVAQIDLLKQAADTPEIQQLQQQVADNPADAALASQLALQLHQVGRNEEALELLF SHLQKDLGAADGQARKMFQEILAALGTGDALASKYRRQLYALLY >gi|333596726|gb|GL892086.1| GENE 1360 1423258 - 1423998 811 246 aa, chain - ## HITS:1 COG:STM0503 KEGG:ns NR:ns ## COG: STM0503 COG0390 # Protein_GI_number: 16763883 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 245 15 259 259 381 85.0 1e-106 MVLVLVAIVVSYREKLGLEKDILWSIARAVIQLVIVGYVLKYIFNVNHAVLTLLMVLFIC FNAAWNAQKRSKYIDKAFISSFIAIATGTALTLAVLVLSGSIEFTPMQVIPISGMIAGNA MVAVGLCYNNLGQRFSSEQQQLQEKLSLGATPKVASARLIRDSIRSSLIPTVDSAKTVGL VSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNARHQLVVT QLKKTG >gi|333596726|gb|GL892086.1| GENE 1361 1424033 - 1424704 254 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 5 220 18 244 329 102 29 7e-20 MNNKKKLLDIRDVGFRVGDTTLLQHVDFCLSPGEFKLITGPSGCGKSTLLKIVASLLSPT EGTILFEGKDIATLSPESYRQQVSYCVQTPSLFGDTVYDNLVFPWDIRNQTPEPKKFADD LARFGLSPETLTKSIADLSGGEKQRVSLIRNLQFLPKALLLDEITSALDDANKRNVNDII HRYAREQNIAVLWVTHDSNEITHADDVITLRPQGGKMQEAHRG >gi|333596726|gb|GL892086.1| GENE 1362 1424847 - 1425701 823 284 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1868 NR:ns ## KEGG: Ent638_1868 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 277 1 279 285 335 58.0 2e-90 MTHIFYEFSSLKPGVPDVETLMEVINSSELTRFVMGAEVVDFVKKALIVNTTIGSFKNCY FAFDDGAYFLEFDGKGKSRRFTEVPDWFVSPAEFARSQWLINHDLADVKATTFIDVLMSY PLKERRAHCNLLFGLDLHKVNVVPAPIAPAGKMGNKNGKTTKPRVTDLGSFELFTAFFAR MKTAVYANEFPTLQVLTGQEDLTKAPHSLKQGIRTWFKAITGDLPPNNKRVGAGNAVLFC APIREQIQQIEAIGLEKYYQGLSKAIADAGDGFITDFSYTWSEA >gi|333596726|gb|GL892086.1| GENE 1363 1425856 - 1426770 1380 304 aa, chain + ## HITS:1 COG:STM0501 KEGG:ns NR:ns ## COG: STM0501 COG0330 # Protein_GI_number: 16763881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Salmonella typhimurium LT2 # 1 304 1 304 305 521 93.0 1e-148 MLIVVPVLIFVALVIVGAGVKIVPQGYQWTVERFGRYTNTLQPGLSLIVPFMDRIGRKIN MMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPKAAYEVSNLELAIVNLTMTNIRTVL GSMELDEMLSQRDSINTRLLHIVDEATNPWGIKVTRIEIRDVRPPAELIASMNAQMKAER TKRAYILEAEGVRQAEILKAEGEKQSQILKAEGDRQSAFLQAEARERSAEAEARATQMVS EAIAAGDIQAVNYFVAQKYTDALKEIGSANNSKVVMMPLDASSLMGSIAGIAELIKDGGN ERKK >gi|333596726|gb|GL892086.1| GENE 1364 1426767 - 1427225 601 152 aa, chain + ## HITS:1 COG:ZybbJ KEGG:ns NR:ns ## COG: ZybbJ COG1585 # Protein_GI_number: 15800225 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli O157:H7 EDL933 # 1 152 1 152 152 197 76.0 4e-51 MIELIVAHPHAFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLLPVGWEWQGALF AVLTLVAAWLWWRWLNKRVQAQKPVDAHLNQRGQQIVGQRFTLDNALINGRGHMRVGDSS WPVVADDDLSAGTRVEVIAVEGITLRVKACQA >gi|333596726|gb|GL892086.1| GENE 1365 1427222 - 1427626 400 134 aa, chain - ## HITS:1 COG:STM0499 KEGG:ns NR:ns ## COG: STM0499 COG0789 # Protein_GI_number: 16763879 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 134 1 134 138 247 93.0 4e-66 MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRSYTQLHLDELTLLRQARQVGFNL EECGELVNLFNDPKRHSADVKKRTLEKVAEIERHIIELQAMREQLLQLAESCPGDDSADC PIIDNLSGCCHRKA >gi|333596726|gb|GL892086.1| GENE 1366 1427735 - 1430233 2763 832 aa, chain + ## HITS:1 COG:STM0498 KEGG:ns NR:ns ## COG: STM0498 COG2217 # Protein_GI_number: 16763878 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 831 1 832 833 1340 88.0 0 MSHTIDLTLDGLSCGHCVKRVKESLEQRPDVESADVTIDHAAVVGSASAEALIDTIKQAG YGAELSHPKAKPLAESSSPSEALTAATPELPVADDLDDSQQLLINGMSCASCVSRVQNAL QAVPGVAQARVNLAERTALVMGSASAADLVQAVEKAGYGAEAIEDDAERRERQQETAIAT MKRFRWQAIVALLVGIPVMVWGMMGDNMMVTADNRTLWLVIGLITLAVMVFAGGHFYTSA WKSLKNRTATMDTLVALGTGAAWLYSMSVNVWPQWFPMEARHLYYEASAMIIGLINLGHM LEARARQRSSKALERLLDLTPPTARVVTDDGEKSVPLSEVQPGMTLRLTTGDRVPVDGEI TQGDAWLDEAMLTGEPIPQQKSQGDAVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQ AQSSKPEIGQLADKISAIFVPVVVGIALLSAAIWYVFGPAPQIVYTLVIATTVLIIACPC ALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVSTA GCTESDALRLAAALEQGSSHPLARAILEKAGDARLPQVSNFRTLRGLGVSGEAEGHTLLL GNQALLNENGVDTSALDAELNAQAAQGATPVLLAVDGKAAALLAVRDPLRQDSVDALQRL HRAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKADAIKNLQSQGRQVAMVGDGI NDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAIAKATLRNMKQNLLGAF VYNSLGIPIAAGILWPLTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKD >gi|333596726|gb|GL892086.1| GENE 1367 1430257 - 1431078 766 273 aa, chain + ## HITS:1 COG:ECs0535 KEGG:ns NR:ns ## COG: ECs0535 COG3735 # Protein_GI_number: 15829789 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 10 273 1 264 264 338 63.0 6e-93 MNLSVYGARMSLFSRIKASFRALFPRRYSWPGMDISLPGGQHLHLVGSIHMGTQDMSPLP SGLIKLLKRADALIVEADISGHESPFAGLESDRPLAERLNETQLAELTRLADETGVSLSM LDTLPLWQIAMVLQATQAQRLGLRGDYGIDYQLLNAARARNLSVIELEGTDSQIALLRQL PDDGLILLDDTLTHWHTNARLLQTMIGWWLDAPPADGKLALPSTFSESLYDVLMNARNQA WRETLYALPAGRYVVAVGALHLYGEGNLPSLLK >gi|333596726|gb|GL892086.1| GENE 1368 1431277 - 1431756 614 159 aa, chain + ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 159 1 159 159 277 91.0 5e-75 MTPAVKLLEKNKISFRIHTYDHDPNETNFGDEVVRKLGLNADQVYKTLLVAVNGDMKHLA VAVTPVAGQLDLKKVAKALGAKKVDMADPMVAQRTTGYLVGGISPLGQKKRLPTLIDAPS QEFETIYISGGKRGLDIELAAGDLAKMLDAKFADIARRE >gi|333596726|gb|GL892086.1| GENE 1369 1431852 - 1433504 2018 550 aa, chain - ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 1025 89.0 0 MKLIKRGVALALIAAWGLTSLPAQAYEKDKTYKITILHTNDHHGHFWRSEYGEYGLAAQK TLVDGIRKEVAAQGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYDAMAVGNHEFD NPLSVLRQQEKWSKFPFLSANIYQKSTGERLFKPWVLFKRQDLKIAVIGLTTDDTAKIGN PEFFTDIEFRKPADEAKLVIQELQQNEKPDVIIATTHMGHYDNGEHGSNAPGDVEMARSL PAGSLAMIVGGHSQDPVCMASENKKQVDYVPGTPCAPDRQNGIWIVQAHEWGKYVGRADF EFRNGEMKLVHYQLIPVNLKKKVTYPDGKSERVLYTPEIAENQQMLSLLTPFQSKGKAQL DVKIGTLNGRLEGDRSKVRFVQTNMGRLVLAAQMARTNADFGVMSGGGIRDSIEGGNITY KDVLKVQPFGNVVVYADMSGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKI KGEPVDPAKTYRLATLSFNATGGDGYPHIDNKPGYVNTGFIDAEVLKQYIEQNSPIDVNA YEPKGEVSWQ >gi|333596726|gb|GL892086.1| GENE 1370 1433669 - 1434889 1427 406 aa, chain + ## HITS:1 COG:ECs0532 KEGG:ns NR:ns ## COG: ECs0532 COG0477 # Protein_GI_number: 15829786 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 405 1 405 406 634 92.0 0 MAISESTQPVQGAPASPPKSRTSFKVLGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFV QIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLAMAGSFEAVLVAA ALVGTGSSVFHPESSRVARMASGGRHGLAQSLFQVGGNFGSSLGPLLAAVIIAPYGKGNV AWFVLAALLAIVVLAQISRWYAAQHRVNKGKPVAKIANPLPRNKVILAVSVLLVLIFSKY FYMASISSYYTFYLMQKFGLSVQNAQFHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSI LGVAPFTLVLPYATLEWTGILTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAF GMGGLGAAVLGMVADHTSIFLVYKICAFLPLLGMLTIFLPDNRHKA >gi|333596726|gb|GL892086.1| GENE 1371 1435122 - 1436798 522 558 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 516 5 508 618 205 26 6e-51 MHHATPLITTIVGGLVLAFILGMIANKLRISPLVGYLIAGVLAGPFTPGFVADTKLAPEL AELGVILLMFGVGLHFSLKDLMAVKSIAIPGAIAQIGVATLLGMALSAVLGWSIMTGIVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEKENI GFASLALDMSITIGKVVAFIAIMMLVGRRLVPWIMSRSAATGSRELFTLSVLALALGIAF GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILVQ QPLAVLGTLAIIIFGKSVAAFFLVRMFGHSPRTALTIAASLAQIGEFAFILAGLGMALNL LPQAGQNLVLAGAILSIMLNPVLFALLEKYLEKTETLEEQTLEEATEDEKQIPVDICNHA LLVGFGRVGSLLGEKLMAQGIPLVVIETSRTRVDELRARGIRAVLGNAANEEIMNLAHLD CARWLLLTIPNGYEAGEIVATAREKCPHIEIIARAHYDDEVEYITERGANQVVMGEREIA NTMLTMLTKPPVEEAVTG >gi|333596726|gb|GL892086.1| GENE 1372 1436973 - 1438277 1756 434 aa, chain - ## HITS:1 COG:ECs0530 KEGG:ns NR:ns ## COG: ECs0530 COG0524 # Protein_GI_number: 15829784 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 857 92.0 0 MKFPGKRKSKHYFPVDARDPLLQQIQQESETSAAWVVGIDQTLVDIEAKVDDAFVARYGL SAGHSLVIEDDVAEALYQELMRENLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNI EIGGYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISDSGERTFAISPGHMNKLRAESIP EEVIAGASALVLTSYLVRCKPGEPMPDATMKAIEYAKKYNVPVVLTLGTKFVIADNPTWW QTFLKEHVSILAMNEEEAEALTGESDPLLASDKALDWVDLVLCTAGPVGLYMAGFTEEES KRKTQHPLLPGAIAEFNQYEFSRAMRHKDCINPLRIFSHIAPYMGGPEKIMNTNGAGDGA LAALLHDITANAYHKTNVPNSSKHTFNWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGL PEREDSLEEAYWDR >gi|333596726|gb|GL892086.1| GENE 1373 1438340 - 1439302 1146 320 aa, chain - ## HITS:1 COG:STM0489 KEGG:ns NR:ns ## COG: STM0489 COG0276 # Protein_GI_number: 16763869 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Salmonella typhimurium LT2 # 1 320 1 320 320 539 82.0 1e-153 MSQAKTGILLANLGTPEAPTSDAVKRYLRQFLSDTRVVDTPRLLWWPLLRGVILPIRSPR VAKLYQSVWMEEGSPLMVYSRRQEKALAARLPEMPVALGMSYGKPSLASAVDSLLAQGVE HIVVLALYPQYSCSTVAAVWDELARILATRRRIPGITFIRDYADNELYIQALASSARASF EKHGEPDLLLLSYHGIPQRFANEGDDYPQRCRDTTRELVSALGLPPEKVMMTFQSRFGRE PWLTPYTDETLKMLGEKGVKHIQVMSPGFSADCLETLEEIAVQNREFFLEAGGEKYEYIP ALNDSPEHIDMMVSLVTACR >gi|333596726|gb|GL892086.1| GENE 1374 1439427 - 1440071 1047 214 aa, chain - ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 393 96.0 1e-109 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT DELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRI VGRRVHAASGRVYHIKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIG YYTKEAQAGNTKYAKVDGTKAVADVRAELEKILG >gi|333596726|gb|GL892086.1| GENE 1375 1440301 - 1442175 2924 624 aa, chain - ## HITS:1 COG:STM0487 KEGG:ns NR:ns ## COG: STM0487 COG0326 # Protein_GI_number: 16763867 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Salmonella typhimurium LT2 # 1 624 9 632 632 1115 92.0 0 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD GELRVRVSFNKENRTLTIADNGIGMNRDEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRAAGDSAENGVLWESKGEGEYTVDDITKADRGTEITLHL REGEDDFLNDWRVRSIISKYSDHIALPVEIEKQEEKDGETVVSWEKINKAQALWTRNKAE IKDDEYNEFYKHIAHDFTDPLTWSHNRVEGKQEYTSLLYIPAQAPWDMWNRDHKHGLKLY VQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSTVTRNLRNALTKRALQML EKLAKDDAEKYQTFWKQFGLVLKEGPAEDTANVETIAKLLRFASTHNDSSAQTVSLEEYV SRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKSF QSVAKADESIDKLADEVDDSAKEAEKALEPFVERVKTLLGDRVKEVRFTHRLTDTPAIVT TDADEMSTQMAKLFAAAGQAVPEVKYIFELNPDHPLVKRAADTQDDARFAEWVELLLDQS LLAERGTLEDPNLFIKRVNALLLA >gi|333596726|gb|GL892086.1| GENE 1376 1442286 - 1442891 718 201 aa, chain - ## HITS:1 COG:STM0486 KEGG:ns NR:ns ## COG: STM0486 COG0353 # Protein_GI_number: 16763866 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Salmonella typhimurium LT2 # 1 201 1 201 201 386 96.0 1e-107 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC RTFTEQDVCNICTNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP DDIGLDRLEQRLESETIKEVILATNPTVEGEATANYIAELCAQYGVDASRIAHGVPVGGE LEMVDGTTLSHSLAGRHKIIF >gi|333596726|gb|GL892086.1| GENE 1377 1442891 - 1443223 230 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 1 110 1 114 114 93 42 4e-17 MFGGKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDP SLLEDDKEMLEDLVAAAFNDAARRIDETQKEKMASVSSGMQLPPGFKMPF >gi|333596726|gb|GL892086.1| GENE 1378 1443277 - 1445205 2078 642 aa, chain - ## HITS:1 COG:STM0484 KEGG:ns NR:ns ## COG: STM0484 COG2812 # Protein_GI_number: 16763864 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Salmonella typhimurium LT2 # 1 642 1 642 642 1000 86.0 0 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRAQLEHILDEEHIVHEPRALQLLARAADGSLRDALSLTDQAIASGDGKLSTEAVSTM LGTLDDDQALSLIEAMIAANGERVMTLVNDAAARGIEWEALLVEMLSLLHRVAMLQLSPS AIGADMATIEPRMRELARTVPPADVQLYYQTLLIGRKELPFAPDRRMGVEMTLLRALAFH PRMPMPEPEAPRQSFAPVAPTAVMSPQQVPPQPTPPPQQNVPLSDATSSVLAARSQLQRA QGATKPKKSEPAAPARARPVNNAALERLASVTERVQSRPAPSALEQKAPAKEEAYRWKAT TVVETVKEVVATPKALKKALEHEKTPELSAKLAEESIERDAWAAEVSKLHLPKLVEQVAL NAWKEQDGNQVRLHLRPGQRHLNSPGAQKALAEALSALQGVPVELTIIEDDNPAVKTPLE WRQAIYEEKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI >gi|333596726|gb|GL892086.1| GENE 1379 1445294 - 1445845 747 183 aa, chain - ## HITS:1 COG:STM0483 KEGG:ns NR:ns ## COG: STM0483 COG0503 # Protein_GI_number: 16763863 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 342 96.0 2e-94 MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKV VGTEARGFLFGAPVALAMGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGD KVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLEKQGITSYSLVPF PGH >gi|333596726|gb|GL892086.1| GENE 1380 1445997 - 1446374 323 125 aa, chain - ## HITS:1 COG:STM0482 KEGG:ns NR:ns ## COG: STM0482 COG2832 # Protein_GI_number: 16763862 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 124 1 124 125 175 90.0 2e-44 MQRTILIIIGWLAVVLGTLGIVLPLLPTTPFILLAAWCFARSSPRFHHWLLYRSWFGGYL RHWQKHRAMPPGAKPRAIAFILITFAVSLWLVKMMWVRILLLAILACLLIFMWRIPVVDE KQQKH >gi|333596726|gb|GL892086.1| GENE 1381 1446497 - 1446952 506 151 aa, chain + ## HITS:1 COG:STM0481 KEGG:ns NR:ns ## COG: STM0481 COG3923 # Protein_GI_number: 16763861 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Salmonella typhimurium LT2 # 3 151 23 171 171 136 57.0 2e-32 MGHATLKPRFDRQLFRTRSTVIQDYLAEMQTHLDELRHAVESEQQEQVAWLAAHLTEQIT ALHREIATWPLRAWDSASPGLGKWQRKRLENQEFERRLFEMKREREARLNNSETLEEQQL LMREISALEGRIVRCRQALDEIERVIERLTR >gi|333596726|gb|GL892086.1| GENE 1382 1446967 - 1447140 239 57 aa, chain + ## HITS:1 COG:no KEGG:ECL_01237 NR:ns ## KEGG: ECL_01237 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 57 1 62 63 77 79.0 2e-13 MSLENAPDEVKLAVDLIMLLENHAIPAETVLKALEIVRRDFEGKLPPHPALSPEGRG >gi|333596726|gb|GL892086.1| GENE 1383 1447145 - 1450492 4020 1115 aa, chain - ## HITS:1 COG:ECs0518 KEGG:ns NR:ns ## COG: ECs0518 COG3264 # Protein_GI_number: 15829772 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 6 1115 9 1118 1120 1776 84.0 0 MLHTNRSQHPVLAVFLILLFYFAAAPLSYARADNGSDTPTRAEVQAQLDTLNKQKDLSAQ EKLVQQDLTETLETLDKIDRIKAETAQLRQKVAQAPENMRKATEALNALSDVDNDDETRK TLTTLSLRQLESRVAQLLDDLQTAQSDLSTYNSQLVSLQTQPERVQNAMYSASQQLQQIR NRLNGITVGEGALRPTQQTLLNIQQTLLNAEIEQQRKSLEGNTVLQDALQKQRDYVTANI NRLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDETARIQANPLVKQELEINHQLSERLIQ ATENGSALVQQNIKVKNWLDRALQAERNVKEQIAVLKGSLLLSRILYQQQQTLPSADELE DMTNRIADLRLEQFDVNQQRDALFQSDTFVAKVEEGHSSEVNAEVHDALLQVVDMRRELL DQLNKQLGNQLMMAINLQINQQQLVSVSKSLQEILTQQIFWVNSNKPMDWDWFKSFPETL KSQIKSMKITVNWEKAWPAVMIAFLAGLPLLLIAGLIRWRLKWLKQYQAKLASEVGQLRN DSQLHTPKAILIDLIRALPVCLLILAVGLILLTMQLNISDLLWAFSKKLALFWLVFGLCW KVLEKDGVAVRHFNMPEKLTSHWRRQIVRISLALLPLHFWSVVAELSPLHLMDDVLGQLV IMLNLLLIAVLMWPMCRDSWRDKESHNLRLVTVTVLAIIPLALMVLTATGYFYTTLRLSG RWIETVYLVIVWNLLFQTVLRGLSVAARRIAYRRAVARRQHQVKEGAEGAEPQEEPTIAL EQVNQQTMRITMLVMIALFAVMFWAIWSDLITVFAYLDSITLWQYNGTEAGAAVMKSVTM GSLLFALVSSVVAWALIRNLPGLLEVLVLSRLNLRQGASYAITTILNYVIIIVGAMTVFG SLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGTFSGTVSK IRIRATTITDFDRKEVIIPNKAFVTERLINWSLSDTTTRVVIRLGVAYGSDLDKVKEVLL EAAKSHPKVMHDPAPDVFFTTFGPSTLDHELRLYVRELRDRSYTVDELNRTIDRLCRENN INIAFNQLEVHLRNEKGDEHTEVKREIKGDDPTPA >gi|333596726|gb|GL892086.1| GENE 1384 1450606 - 1451259 642 217 aa, chain - ## HITS:1 COG:STM0477 KEGG:ns NR:ns ## COG: STM0477 COG1309 # Protein_GI_number: 16763857 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 210 1 210 217 343 84.0 1e-94 MARKTKQQALETRQHILDVAMRLFSQQGVSATSLAQIAQAAGVTRGAIYWHFKDKSDLFG EIWELSESSISDLESEYRAKFPHDPLSVLREILVYILEATVVEERRRLMMEIIFHKCEFV GEMAVVQQAQRDLCLESYDRIEQVLTECMQAKMLPATLLTRRAAILMRSYISGLMENWLF APESFDLKSEARSYVEIFLEMCQLCPTLQSKLSPRPA >gi|333596726|gb|GL892086.1| GENE 1385 1451401 - 1452594 1259 397 aa, chain + ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 570 85.0 1e-162 MNKNRGLTPLAVVLMLSGSLALTGCDDKQAQQGAQQVPEVGVVTLKSEPLQMTTELPGRT SAYRIAEVRPQVSGIILKRNFTEGGDVKAGESLYQIDPATYQASYESAKGDLAKAEAAAK ISQLTLNRYKKLLGTQYISQQDYDTALADAQQANAAVVAAKAAVETARINLAYTKVTSPI SGRIGKSAVTEGALVQNGQTTALATVQQLDPIYVDVTQSSNDFLRLKQELASGQLKQENG KAKVELVTNDGIKFSQTGTLEFSDVTVDQTTGSITIRAIFPNPDKTLLPGMFVRARLEEG TNPSAILVPQQGVTRTPRGDASALVVGADNKVEMRNITATQAIGDKWLVTQGLKDGDRVI ITGLQKVRPGAQVKAQEVKSDDKQQASAAGQSEQTKS >gi|333596726|gb|GL892086.1| GENE 1386 1452617 - 1455763 3749 1048 aa, chain + ## HITS:1 COG:STM0475 KEGG:ns NR:ns ## COG: STM0475 COG0841 # Protein_GI_number: 16763855 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1047 1 1048 1049 1898 93.0 0 MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISATYPGADAKTVQDT VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ EVQQQGVSVEKSSSSFLMVVGVINTNGTMTQEDISDYVGANMKDAISRTSGVGDVQLFGS QYAMRIWMDPNKLNNFQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL TSADEFSKILLKVNQDGSQVRLRDVAKVELGGENYDVVAKFNGKPASGLGIKLATGANAL DTATAIRAELKKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLAIFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPIQKGGHGEHKGFFGWFNRMFDKSTHHYTDSVGNILRSTGRY LLLYIIIVVGMAFLFVRLPSSFLPDEDQGVFLSMAQLPAGATQERTQKVLDEMTDYFLTK EKDNVESVFAVNGFGFAGRGQNTGIAFVSLKDWSERPGAENKVEAITGRAMGTFSQIKDA MVFAFNLPAIVELGTATGFDFQLIDQGGLGHEKLTQARNQLFGEVAKHPDLLVGVRPNGL EDTPQYKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAQYRM LPNDINNWYVRGSNGQMVPFSAFSTSHWEYGSPRLERYNGLPSMEILGQAAPGRSTGEAM NLMEELASKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV MLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI EATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFF VPVFFVVVRRRFSRKNEDVEHNHSVEHH >gi|333596726|gb|GL892086.1| GENE 1387 1456272 - 1456646 258 124 aa, chain + ## HITS:1 COG:no KEGG:ECL_01232 NR:ns ## KEGG: ECL_01232 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 124 1 124 124 241 98.0 8e-63 MDEYSPKRHDIAQLKFLCESLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFAL NYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINAQDLQKWRKSGNRLFRCFTNVSRANPV SLSC >gi|333596726|gb|GL892086.1| GENE 1388 1456674 - 1456892 181 72 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1553 NR:ns ## KEGG: APECO1_1553 # Name: hha # Def: Hha protein # Organism: E.coli_APEC # Pathway: not_defined # 1 72 68 139 139 134 95.0 9e-31 MSEKPLTKVDYLMRLRRCQSIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY DKIPSSVWKFVR >gi|333596726|gb|GL892086.1| GENE 1389 1457101 - 1457652 525 183 aa, chain + ## HITS:1 COG:STM0472 KEGG:ns NR:ns ## COG: STM0472 COG0110 # Protein_GI_number: 16763852 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 306 78.0 1e-83 MSEEKQKMIAGEYYRPGDDTLRADRLRARHLIHRYNHTAPDEKAERRAVLAELLGQSEGA YIEPSFRCDYGYNIYLGKNFYANFDCVMLDVCPVHIGDNCMLAPGVHIYTATHPLDATER NSGLEYGKPVTIGDNVWIGGRAVINPGVTIGDNVVIASGAVVTKDVPANAVVGGNPAKII KML >gi|333596726|gb|GL892086.1| GENE 1390 1457769 - 1458236 476 155 aa, chain + ## HITS:1 COG:no KEGG:ECL_01229 NR:ns ## KEGG: ECL_01229 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 153 1 153 155 241 92.0 7e-63 MTEIQRLLTATIDDLNTREKRDNRPRFSISFIRKHPGLFVAMYAAWLATLIVMLRSETLV DSVWLLVVLFVVFNAFFFFDVNPRYRYEDIDVLDFRVCYNGEWYNTRYVPPELIDNIMRS PSVETGLKEKLQKMVSTKGELSFYDVFTLSRPASS >gi|333596726|gb|GL892086.1| GENE 1391 1458272 - 1458412 239 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146310596|ref|YP_001175670.1| 50S ribosomal protein L36 [Enterobacter sp. 638] # 1 46 1 46 46 96 100 4e-18 MQVLNSLRSAKQRHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKRR >gi|333596726|gb|GL892086.1| GENE 1392 1458415 - 1458675 397 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|162286713|ref|YP_001175669.2| 50S ribosomal protein L31 type B [Enterobacter sp. 638] # 1 86 1 86 86 157 82 2e-36 MKPNIHPTYRTVVFHDTTANEYFKVGSTIKTDREIELEGETYPYVTLDVSSKSHPFYTGK QKTFSTDGSAARFRKRFGGFLDAKRG >gi|333596726|gb|GL892086.1| GENE 1393 1458893 - 1460461 1482 522 aa, chain + ## HITS:1 COG:STM0468 KEGG:ns NR:ns ## COG: STM0468 COG4943 # Protein_GI_number: 16763848 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Salmonella typhimurium LT2 # 1 517 1 516 516 644 62.0 0 MRTRHLVNLVTGVLIFSVLVPVCLSIWLAHRQAEDKFVDALDIFASRVLVRTDRVVSQAK QALTHMQTFDAPPCSPLHLREMRRVAFSWRYIQEVMYIESTKPLCSSLEQSSNTATLPPP MRITGDGYRAWLTSQNDLGIHRYMVVMGKGHYLVMIDPASLVDVVPFGDISMDAALVGSS THRIFAHSNPPDPHILTRVSDKQDISSLQYNGSMYIFKPVPELGFTVIAWASLKPLAESW HQQLIIWLPAGILISLVAALIVLRILRRLLSPRHRLIDAINNREIEVHYQPIVALCSGKL VGAEALMRWPQPDGTNLSPDLFVPLAEQTGLISTLTQLVVNEVFEDLGAWLHQHPEMHIS VNLAPSDLTSPELPRLLSQLLNKWEVHPRQIALELTERGFADPAVSVPAIAAFRRAGHAI YIDDFGTGYSSLSYLQDLDVDTLKIDKSFVDALEYKHVTPHIIEMAKSLKLAMVAEGIET EGQIEWLHRHGVQYGQGWYFSKALPEADFILWAGHNLEKHIT >gi|333596726|gb|GL892086.1| GENE 1394 1460454 - 1460726 399 90 aa, chain - ## HITS:1 COG:RSp0553 KEGG:ns NR:ns ## COG: RSp0553 COG1937 # Protein_GI_number: 17548774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 90 1 90 90 114 72.0 3e-26 MSHTVRDKKKLLTRLKKIQGQSTALEKMLNSDHECAEVLQQLAAIRGAVNGMMMQVIEGH LTDHVVKEPEEAQREADLGVVMQVIKSYLK >gi|333596726|gb|GL892086.1| GENE 1395 1460861 - 1461280 282 139 aa, chain + ## HITS:1 COG:RSp0552 KEGG:ns NR:ns ## COG: RSp0552 COG2215 # Protein_GI_number: 17548773 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 1 114 1 114 377 171 74.0 5e-43 MNDFSSLIQQGNAWLFVPSAILLGALHGLEPGHSKTMMAAFIVAIRGTLKQAVLLGLAAT LSHTAVVWIIAMAGLWFGRGWDAHTSEPWFQLISGVLIVTIALWMAWRTWRESQPHHHHH DHHHHHDHAHHHDHSSPPS >gi|333596726|gb|GL892086.1| GENE 1396 1461703 - 1462119 474 138 aa, chain - ## HITS:1 COG:ECs0397 KEGG:ns NR:ns ## COG: ECs0397 COG3250 # Protein_GI_number: 15829651 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 2 136 889 1023 1024 179 61.0 1e-45 MLADIPETVRWLGLGPLENYPDRKLAAQQGRWALPLEEMHTPYIFPTENGLRCDTRELTF GSHQLQGQFHFSLSRYSQRQLHETTHQHLLREEAGCWLNLDAFHMGVGGDDSWSPSVAPA FILQNRQLRYTFSWQQNG >gi|333596726|gb|GL892086.1| GENE 1397 1462432 - 1464792 1923 786 aa, chain - ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 8 783 7 779 1024 1062 67.0 0 MSSTLPLTLSALLARRDWENPGVTQWNRLAAHAPFHSWRDETVAREDKPSLSRRLLNGVW RFSFFPAPEQVPEAWVTDDLADAVEMPVPSNWQREGFDIPIYTNVTYPINVNPPYVPAEN PTGCYSLTFEMDDAWLSGGQTRIIFDGVNSAFHLWCNGQWMGYSQDSRLPAEFDLSAVLR PGQNRLAVMVLRWCDGSYLEDQDMWRMSGIFRDVSLLHKPETRIADYQIVTDLNAECDRA VLRVDVALEGSRYAECEVAFTLWRNGEACARTTQQPGSAIVDERGRWAERLTVAMPVNNP ALWSAETPECYRLTLSLRDVQGNVLETEACDVGFRRVDISNGLLKLNGKPLLIRGVNRHE HHPEKGQVMDEATMRRDIELMKQHNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETH GMVPMSRLADDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWLKTT DPTRPVQYEGGGASTAATDIVCPMYARVDQDQPFPAVPKWSIKKWIGMPDETRPLILCEY AHAMGNSFGGFASYWQAFRSHPRLQGGFVWDWVDQALTKKAEDGTAFWAYGGDFGDTPND RQFCLNGLVFPDRTPHPALYEAQRAQQFFTFTLVSTAPLVVEIQSDYLFRHTDNEHLQWS VARDGAVLASGEIALSVAPQGTQRVEIPLHELAAEPGEVWLNVEVVQPQATPWSPPGHRC AWDQWPLPAPLYLAPPKAGGIPPQLTVQDEVLDITHQQQRWQFSRLTGNLIQWWNGSAET LLSLAS >gi|333596726|gb|GL892086.1| GENE 1398 1464896 - 1465966 1061 356 aa, chain - ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 353 1 356 360 317 52.0 2e-86 MKAITLYDVARVAGVSYQTVSRVINDAEHVSARTREKVRQAMAALHYVPNRGAQQLAGKR TRTLGLMTSDLALHAPSQIASAVKSRAGERGASVLISMVEQPAQWQAALQELLAQRVEAL LVNVPLEDTQAEMLQEMASPIPVLFLDVSPSARVNSLVFNAEQGAGLGAEHLLSLGHQRI ALLAGPESSVSARARLAGWKTTLAEAGVEAFAVVQGDWSAASGYEKGHQLLAGAELPEAI LVANDQMALGVIRACAEKGVAVPGQISVVGFDDTADSAWFSPPLTTVRQAFREAGERSVE WLMAPAHHEERRQEQLPVTLIVRHSTAPRAAQQADREDLAQQLRTLALLAEKLARR >gi|333596726|gb|GL892086.1| GENE 1399 1466044 - 1466655 733 203 aa, chain - ## HITS:1 COG:HI0522 KEGG:ns NR:ns ## COG: HI0522 COG2364 # Protein_GI_number: 16272466 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Haemophilus influenzae # 8 193 29 214 218 120 39.0 1e-27 MVRRLVQLYVGLGLYGLSTAMFIRSDLGVDPWDVFHLGIAIQTGMSIGTVIILTGAAVLL LWIPLRQLPGLGTISNVICIGLAADASMALIPELTSLPVRIILLVSGIVVNALATGMYIG AGFGAGPRDGLMTGIHARLGWSIRSVRTAIEVTVLIVGYLLGGAFGVGTVLYALTIGPLI QLCLPWFRQRPRVQNASQPEQVV >gi|333596726|gb|GL892086.1| GENE 1400 1466740 - 1468161 1470 473 aa, chain + ## HITS:1 COG:BH0432 KEGG:ns NR:ns ## COG: BH0432 COG1167 # Protein_GI_number: 15612995 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus halodurans # 22 446 10 464 482 149 25.0 1e-35 MSSRRFGSQSLVRLLGHWQQASSRTPLWRQLADSLRLLILDGRLALNTRLPGERELAAAL DVSRTTISSALAHLREEGYLESRQGSGSRTILPDSRAVPTLSTASAALDLSTAALNAGPE IHQAYTHALTAITPNLALTGYDQLGLPSLREAIAARYTARGLPTRANEVMVVNGAVSGFA LILRMMTGPGDRVVVDHPTYPLAIAAIQGALCRPVGVSLPETGWDTDGFAATLAQTAPRL AYLMPDFHNPTGRCMDAATRQTITDIAAQTRTTLVVDETMVDLWFDAPPPPPLAAFNPEA AVITLGSAGKSFWGGLRLGWIRASSRTIATLAQARDTLDLGSPVLEQLATLWLIENSETF LPARRQMLAERRDRCGQMLREHFPEWRFQEAEGGLSYWIELPGMLATQLAARAETTGIIM GTGTRFGLSGAFDRYLRMPFSLNPPELEEALLRIKPLWLALNKSVAPVKRSLV >gi|333596726|gb|GL892086.1| GENE 1401 1468232 - 1468447 173 71 aa, chain - ## HITS:1 COG:no KEGG:ECL_01217 NR:ns ## KEGG: ECL_01217 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 71 1 71 71 146 92.0 3e-34 MKQQLSTASDYNEACNLLRSGYVKHVRLGWNVGSDEFFRIASDWCDTGAKIKKEGENFII SLKGFPIPPQH >gi|333596726|gb|GL892086.1| GENE 1402 1468444 - 1468695 180 83 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0924 NR:ns ## KEGG: Ent638_0924 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 83 1 83 83 112 95.0 6e-24 MVTAVLNVKIDEALKERLRHYAEDNNENLSVTTEKLLLLAFEAVEEAGVSEEDVDNQHTE EESVTPFTPKEIKALRKLLKKRK >gi|333596726|gb|GL892086.1| GENE 1403 1469209 - 1469520 193 103 aa, chain + ## HITS:1 COG:STM0466 KEGG:ns NR:ns ## COG: STM0466 COG3695 # Protein_GI_number: 16763847 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Salmonella typhimurium LT2 # 1 103 27 129 129 182 89.0 2e-46 MDEHDTFPQRVWQIVASIPEGCVTTYGEVARLAGSPRAARQVGGVLRRLPEGSTLPWHRV VNRHGAISLTGPDLQRQRQALLSEGVQVSGAGQIDMQKYRWAY >gi|333596726|gb|GL892086.1| GENE 1404 1469557 - 1470084 546 175 aa, chain - ## HITS:1 COG:STM0465 KEGG:ns NR:ns ## COG: STM0465 COG3126 # Protein_GI_number: 16763846 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 159 1 159 189 186 74.0 2e-47 MKLVPMLSGVAIAVALSACAGKSADVPVPTASANGINTLSQQAIQQPNVSGTIWIKQKVA LPPDAVLTVTLSDASLADAPSKVLAQRAVRTEGKQAPFSFVLPYNPSDVQPNARILLSAA VTINDKLVFITDTVQEAVNKGGTKIDLTLVPVQQTEVPVATQTNQPTLPTPPTQM >gi|333596726|gb|GL892086.1| GENE 1405 1470288 - 1471148 925 286 aa, chain + ## HITS:1 COG:ECs0506 KEGG:ns NR:ns ## COG: ECs0506 COG1946 # Protein_GI_number: 15829760 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Escherichia coli O157:H7 # 1 284 1 284 286 495 87.0 1e-140 MSQALNNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPADRLVHSF HSYFLRPGDSAKPIVYDVEVLRDGQSFSARRVAAIQHGKPIFYMTASFQAPEPGYEHQKM MPPAPSPDDLKSETEIARALAHLLPPQVKEKFLCDKPLEIRPVEFHNPMKGHTAEPKRQV WIRANGTVPEDFRVHQYLLGYASDFNFLPVALQPHGVGFLEKGMQVATIDHSMWFHRPFN MNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNRG >gi|333596726|gb|GL892086.1| GENE 1406 1471247 - 1472533 1711 428 aa, chain - ## HITS:1 COG:ECs0505 KEGG:ns NR:ns ## COG: ECs0505 COG0004 # Protein_GI_number: 15829759 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 689 92.0 0 MKIATMKTALGSLALLPGLAMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRG KNVLSMLTQVAVTFALVCVLWVVYGYSLAFGEGNAFFGNVNWAMLKNIELTAVMGSFYQY IHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGA LDFAGGTVVHINAAVAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYFGWFGFNAG SASAANEIAALAFVNTVVATAGAILSWVFGEWAVRGKPSLLGACSGAIAGLVGITPACGY VGVGGALLIGIVAGLAGLWGVTALKRVLRVDDPCDVFGVHGVCGIIGCIMTGIFAAQSLG GVGYAEGVTMMHQVLVQLESIAITVVWSGVVAFIGYKLADMTVGLRVPEEQEREGLDVNS HGENAYNA >gi|333596726|gb|GL892086.1| GENE 1407 1472569 - 1472907 463 112 aa, chain - ## HITS:1 COG:YPO3143 KEGG:ns NR:ns ## COG: YPO3143 COG0347 # Protein_GI_number: 16123305 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Yersinia pestis # 1 112 1 112 112 194 96.0 5e-50 MKLVTVVIKPFKLEDVREALSSMGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVK IDVAIADDQLDEVIDVVSKAAYTGKIGDGKIFVAELQRVIRIRTGESDEAAL >gi|333596726|gb|GL892086.1| GENE 1408 1473119 - 1474900 233 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 332 565 120 355 398 94 34 2e-17 MRKFGQMWPTLKRLLAYGSPWRKPLSIAVLLLWIAAIAEVTGPLLISYFIDNMVAKSYLP LGLVAGLGVAYVGLQLTAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQP VGQVISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAITIFPAVLI VMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMA RMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGLTTRGTIEVGVLYAFISYLGRLNEPLIE LTTQQSMLQQAVVAGERVFELMDRPRQTYGNDERPLESGSIAFDHVSFAYRDDQLVLQDI NLEVPSRGFVALVGHTGSGKSTLASLLMGYYPLTQGEIRLDGRPLASLSHNALRKGVAMV QQDPVVLADTFYANVTLGRPFTQEQVWDVLETVQLADLARGLTEGINTRLGEQGNNLSVG QKQLLALARVLIETPQVLILDEATASIDSGTEQAIQQALAAVRDRTTLVVIAHRLSTIVD ADTILVLHRGQAVERGTHRALLEAKGRYWQMYQLQLAGDELAASVREEESLSA >gi|333596726|gb|GL892086.1| GENE 1409 1474893 - 1476647 180 584 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 351 567 294 518 563 73 30 3e-11 MRLFAQLSWYFRREWQRYLGAVALLIIIAILQLIPPKVVGYVVDGVTEQHYTAARVMMWV GTLVLTAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLIARA TNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWELTLLALLPMPLMALAINRYGE QLHERFKLAQAAFSSLNDRTQESMTSIRMIKAFGLEDRQSALFAADAADTGAKNMRVARI DARFDPTIYIAIGMANLLAVGGGSWMVVRGTMTLGQLTSFAMYLGLMIWPMLALAWMFNI VERGSAAYSRIRAMLAEVPVVNDGSEPVPEGPGILKADIRAFIYPQTEHPVLENVGFTLR PGQMLGICGPTGAGKSTILSLIQRHFDVSEGDIRFHDVPLPRLLLDDWRSRLAVVSQTPF LFSDTIANNVALGCPTATQDQIEHVARLASVHEDILRLPQGYDTEVGERGVMLSGGQKQR ISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEI LVLQHGHIAQRGQHDQLTEQTGWYRDMYRYQQLEAALDEEVADA >gi|333596726|gb|GL892086.1| GENE 1410 1476678 - 1477136 468 152 aa, chain - ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 152 30 181 181 292 92.0 2e-79 MLDKIDRKLLSLLQSDCTLSLQALADAVNLTTTPCWKRLKKLEDDGILLGRVALLDPEKL GLGLTAFVLIKTQHHSSEWYCRFVTQVSDMPEVLGFWRMAGEYDYLMRVQVADMKRYDDF YKRLVNSVPGLSDVTSSFAMEQIKYTTALPIE >gi|333596726|gb|GL892086.1| GENE 1411 1477252 - 1478298 962 348 aa, chain + ## HITS:1 COG:STM0458 KEGG:ns NR:ns ## COG: STM0458 COG0031 # Protein_GI_number: 16763839 # Func_class: E Amino acid transport and metabolism # Function: Cysteine synthase # Organism: Salmonella typhimurium LT2 # 1 347 2 348 351 647 87.0 0 MNSTWVKHAISEINADYQRSADTHLIRLPLPGFPGIQLYLKDESTHPTGSLKHRLARSLF LYGLCNGWIKEGTTIIESSSGSTAVSEAYFARLLGLPFIAVMPACTAKRKVEQIEFYGGR CHFVESACEIYAASEMLARELNGHYMDQFTFAERATDWRGNNNIADSIFRQMTHEPHPVP AYIVMSAGTGGTSATIGRYIRCQGYDTQLMVVDPQNSVFLDYWQSRDASLRSPVGSKIEG IGRPRVEPSFIPDVVDEMLRVPDAASVATAHWLETQLGRKVGASTGTNMWGALQLAARMR DEGRTGSVVTLLCDSGERYLDTYYNPDWVKANIGDVAPWKAQISQLVK >gi|333596726|gb|GL892086.1| GENE 1412 1478339 - 1479157 840 272 aa, chain - ## HITS:1 COG:STM0457 KEGG:ns NR:ns ## COG: STM0457 COG0561 # Protein_GI_number: 16763838 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 272 1 272 272 463 81.0 1e-130 MARLAAFDMDGTLLMPDHRLGEQTLNTLKRLREREVTLTFATGRHVLEMRHLLGTFSLEA FLITGNGTRIHSVDGDVLHRQDLNPEVADIVLHSSWDTQASVHVFNDEGWFTGRELPDLL HAHVYSGFKYQLIDLRRIPAHKVTKICFCGDHDDLCRLRIQLNEALGDRAHLTFSAVDCL EVLPVGCNKGSALAVLSDHLGLTMQDCMAFGDAMNDHEMLSSVGRGLIMGNAMPQLIAAL PHLPVIGHCRNEAVSHFLTHWLDKNNLPYSPE >gi|333596726|gb|GL892086.1| GENE 1413 1479160 - 1479375 116 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLAAKAAAGKFTDGHLLRRASGGMPQTLILVKTVKLAHGKPGTIIIIYSLLLPYISRNT DAQVNRITFRE >gi|333596726|gb|GL892086.1| GENE 1414 1479259 - 1480959 948 566 aa, chain + ## HITS:1 COG:STM0456 KEGG:ns NR:ns ## COG: STM0456 COG4533 # Protein_GI_number: 16763837 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 565 1 565 566 848 72.0 0 MRQLNRLNQYQRLWHPSAGAPQQVTISELASRCFCSERHVRTLLRQAQEAGWLSWHARSG RGKRGELRFHVTPDSLRNTMMEAALKSGQQHNALELAQLAPEDLRSLLHPFMGGQWQNDT PTLRIPYYRSLEPLQPGFLPGRAEQHLAGQVFSGLTRFNGNSSEPTGDLAHHWEVSADGL RWHFYIRSTLHWHNGDKIETAQLRQSLTALLSQPGMGTLFRSVQCIETTHPQCLTFILHQ PDYWLAHRLATYCSRLAHPDYPVVGSGPFRLSVFEPELVRLESHDQYHLSHPLLKAIEYW ITPQLFDYSLGTSCRHPVQIAIGEADELASLRLVSNSTSLGFCYLTLKQSPRLSELQAKR LINIIHLSTLLHTLPLNEGLITPTEELLPGWAIPQWPDLTDVALPETLTLVYHLPVELHT MASQLKEYLARQGCELTVIFHDAKTWDGCQQLADADIMMGDRLIGEAPAYTLEQWLRCDA LWPHLLSAPAYAHLQATLDAVQTQADDRDRHAGLQAIFSRLMETAVLTPLFNYQYQISAP PGVNGIRLNTRGWFDFTEAWLPPPNA >gi|333596726|gb|GL892086.1| GENE 1415 1481026 - 1481721 713 231 aa, chain + ## HITS:1 COG:ECs0498 KEGG:ns NR:ns ## COG: ECs0498 COG0603 # Protein_GI_number: 15829752 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 449 92.0 1e-126 MKRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKV LDVTLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAYQVKAEAVI TGVCETDFSGYPDCRDEFVKALNHAVDLGMAKETCFETPLMWLDKAETWALADYWGKLDV VRNETLTCYNGIKGDGCGQCAACNLRANGLNHYLADKAGVMAAMQKKTGLK >gi|333596726|gb|GL892086.1| GENE 1416 1481784 - 1482182 513 132 aa, chain - ## HITS:1 COG:STM0454 KEGG:ns NR:ns ## COG: STM0454 COG0824 # Protein_GI_number: 16763835 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Salmonella typhimurium LT2 # 1 131 1 131 132 236 91.0 6e-63 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSESFQWLTAHNIAFVVVNININY RRPAVLGDVLTVTSEVQQLNGKSGVLSQVVTLDPEGQVVADALITFVCIDLKTQKALPLE GELREKLELMIA >gi|333596726|gb|GL892086.1| GENE 1417 1482280 - 1482660 535 126 aa, chain - ## HITS:1 COG:STM0453 KEGG:ns NR:ns ## COG: STM0453 COG1555 # Protein_GI_number: 16763834 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Salmonella typhimurium LT2 # 1 126 1 124 124 136 73.0 8e-33 MKCGIKALLITLAIATSGMSAGALAATPAAKAQAAQNQAEATSQGHGKANATASPKAAEE EGTRVSINTASAEDLARVMNGVGLKKAQAIVSYREEYGPFKTLDDLKQVPGMGSALVERN LAHLTL >gi|333596726|gb|GL892086.1| GENE 1418 1482809 - 1484680 2256 623 aa, chain - ## HITS:1 COG:ybaU KEGG:ns NR:ns ## COG: ybaU COG0760 # Protein_GI_number: 16128426 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli K12 # 1 622 1 623 623 924 83.0 0 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSSYLIGGGANYAAKVNGQEISRGQFENAFA GERNRMQQQLGDQYSELAANEGYMKNLRQQTLNRLIDEALLDQYAKSLGLGISDEQVKKA IFSTQAFQSNGKFDNARYNSIVNQMGMTADQYAQALRNQLTTQQLINAVVGTDFMLKGET EELAALVAQQRVVREATIDVNALAAKQQVIDAEVNAYYEQNKNNFISPEQFRVSYIKLDA AAMQENATDAEIQSYYDQHQDQFTQPQRNRYSVIQTKTEAEAKAVLDELNKGADFATVAK AKSTDIISAKNGGDMGWLEASTTPDELKNAGLKEKGQLSGVIKSSVGFLVARLDDVVAAK TKPLADVRDDIAAKVKQEKALDAFYALQQKVSNAASNDNESLAGAEQAAGVKAVETGWFS HENLPEELNFKPVADAIFNGGLVGENGTPGSNSDIITVDGDRAFVLRVSEHKAEAVKPLA EVKDQVVALVKHNKAAQQAKLDAEKILADLKAGKNDALKAAGLSFGEAKTLSRTGQDPVS QAAFGLSLPAKDKPVFGTTTDMQGNVVLLALDEVKAGTLPEAQKKAMVQGITQNNAQIAF EAMMSNLRKEAKIKLGDAVTQEQ >gi|333596726|gb|GL892086.1| GENE 1419 1484893 - 1485165 212 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 124 90.0 6e-29 MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPGFRAGKALKDAVN >gi|333596726|gb|GL892086.1| GENE 1420 1485376 - 1487730 3011 784 aa, chain - ## HITS:1 COG:STM0450 KEGG:ns NR:ns ## COG: STM0450 COG0466 # Protein_GI_number: 16763831 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Salmonella typhimurium LT2 # 1 784 1 784 784 1452 97.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST DEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARITTLSDDGEHFSAKAEYLDSP ELDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADK QSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQ VPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGV GKTSLGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIVGIIRYYTREAG VRSLEREISKLCRKAVKQLLLDKSLKHIVINGDNLHAYLGVQRFDYGRADNENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQNEPSGMQV VTAK >gi|333596726|gb|GL892086.1| GENE 1421 1487915 - 1489189 1697 424 aa, chain - ## HITS:1 COG:ECs0492 KEGG:ns NR:ns ## COG: ECs0492 COG1219 # Protein_GI_number: 15829746 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 807 97.0 0 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RSALPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKATSEKPNEGQLLAQVEPEDLIKFGL IPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFNLEGVELEFRDEALDAIAK KAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIGGQTKPLLIYGKPEAQQ ASGE >gi|333596726|gb|GL892086.1| GENE 1422 1489317 - 1489940 722 207 aa, chain - ## HITS:1 COG:ECs0491 KEGG:ns NR:ns ## COG: ECs0491 COG0740 # Protein_GI_number: 15829745 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 410 98.0 1e-115 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIER DTERDRFLSAPEAVEYGLVDSILTHRN >gi|333596726|gb|GL892086.1| GENE 1423 1490201 - 1491499 1610 432 aa, chain - ## HITS:1 COG:STM0447 KEGG:ns NR:ns ## COG: STM0447 COG0544 # Protein_GI_number: 16763828 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Salmonella typhimurium LT2 # 1 432 1 432 432 707 94.0 0 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA SVRQDVLGELMSRNFIDAIIKEKINPAGAPNYVPGEYKQGEDFTYSVEFEVYPEVELKGL ESIEVEKPIVSVTDEDVDGMLDTLRKQQANWKEKEGAVDAEDRVTIDFTGSVDGEEFEGG KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFVINLKKV EERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELNGAVRNRVKSQAIEGLVKANDI DVPAALIDSEIDVLRRQAAQRFGGNQQQAMELPRELFEEQAKRRVVVGLLLGEVIRTHEL KADEERVKGLIEEMASAYEDPSEVIEFYGKNKELMDNMRNVALEEQAVEAVLAKAKVTEK ETSFTELMNQQA >gi|333596726|gb|GL892086.1| GENE 1424 1491831 - 1492148 253 105 aa, chain - ## HITS:1 COG:ECs0489 KEGG:ns NR:ns ## COG: ECs0489 COG0271 # Protein_GI_number: 15829743 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Escherichia coli O157:H7 # 1 105 12 116 116 199 94.0 1e-51 MMIREQIEEKLRAAFNPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRLI YSTLTDELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGTIA >gi|333596726|gb|GL892086.1| GENE 1425 1492491 - 1493030 748 179 aa, chain + ## HITS:1 COG:yajG KEGG:ns NR:ns ## COG: yajG COG3056 # Protein_GI_number: 16128419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 179 48 226 226 299 90.0 2e-81 MLAGCATPPTTIDVSPKITLPQQDPSLMGVTVSINGADQRQDQALAKVTRDNQQVTLTAS RDLRFLLQEVLEKQMTSRGYMIGPSGAVDLQIIVNNLYADVSQGNVRYNIATKADIAIIA TAKNGNKMNKNYRASYSVEGAFQASNKNIADAVNSVLTDTIADMAQDTSIHDFIKQNAR >gi|333596726|gb|GL892086.1| GENE 1426 1493076 - 1494551 1476 491 aa, chain + ## HITS:1 COG:STM0444 KEGG:ns NR:ns ## COG: STM0444 COG0477 # Protein_GI_number: 16763825 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 490 1 490 491 740 85.0 0 MSSHYLRIFQQPKSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYV FKFLWSPVMDRYTPPFLGRRRGWLVMTQVLLLLAIAAMGFLEPSTQLRWMAALAVVIAFC SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADRYLGWQGMYWLM AALLIPCIIATLFAPEPSDVIPVPRSLEQAVAAPLRDFFGRNNAWLILLLIVLYKLGDAF AMSLTTTFLIRGVGFDAGEVGVVNKTLGLFATIVGALYGGVLMQRLTLFRALLIFGILQG ASNAGYWLLSITDKHMISMATAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL SAVGRVYVGPVAGWFVEAHGWPTFYLFSVVAAVPGILLLLVCRQTLEYTQRTEHFMPRTE YQAAYRFSLRLLMAGCLALVVWLAVLIMNATTTLSLPFETLLLDAGVFLAVVGILTGGML DFMSLRKTQMT >gi|333596726|gb|GL892086.1| GENE 1427 1495031 - 1495978 983 315 aa, chain + ## HITS:1 COG:cyoA KEGG:ns NR:ns ## COG: cyoA COG1622 # Protein_GI_number: 16128417 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Escherichia coli K12 # 1 315 1 315 315 600 94.0 1e-171 MRLRKYNKSLGWLSLFAGTVLLSGCDSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIILFLAVLTWKTTHALEPSKPL VHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVQFKVTSNSVMNSFFIPRLG SQIYAMAGMQTNLHLIANEAGTYDGISASYSGPGFSGMKFKAIATPDRATFDQWVAKAKQ SPNTMSDMAAFEKVAAPSEYNKVEYFSNVKPNLFKDVIGKFMDHGMSMDMTQPEGEHNTH QGMEGMDMSHAETAH >gi|333596726|gb|GL892086.1| GENE 1428 1495995 - 1497986 2352 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1187 93.0 0 MFGKLTLDAVPYHEPIIMVTIAAIIIGGAALVGLITYFGKWSYLWNEWLTSVDHKKLGIM YCIVGIVMLIRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPLVI GLMNVVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIE YSPGVGVDYWIWALQLSGVGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII ASFPILTVTIALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSE IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG VKIFNWLFTMYQGRIQFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF HNVIIGGVVFGCFAGVTYWWPKAFGFTLNEKWGKRAFWFWIIGFFVAFMPLYVLGFMGMT RRLSQQIDPQFHPMLMIAAGGAALIACGILCQLIQYYVSIRDRNLNRDLTGDPWGGRTLE WSTSSPPPFYNFAVVPHIHERDAFWEMKEKGEAYKQPEHYEEIHMPKNSGAGIVIAAFAT VFGFAMIWHIWWMAIVGFAGIVISWIVKSFDEDVDYYVPVREVEKLENQHFDEISKAGLK NGN >gi|333596726|gb|GL892086.1| GENE 1429 1497976 - 1498590 776 204 aa, chain + ## HITS:1 COG:cyoC KEGG:ns NR:ns ## COG: cyoC COG1845 # Protein_GI_number: 16128415 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Escherichia coli K12 # 1 204 1 204 204 347 92.0 8e-96 MATDTLAHSTAHAHEHAHHDTGPTKVFGFWIYLMSDCILFCCLFATYAVLVNGTAGGPTG KDIFELPFVLVETALLLFSSITYGMAAIAMYKNNKSQVVSWLALTWLFGAGFIGMEIYEF HHLIMEGFGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMFQISRRGLTSTNRTRIMCL SLFWHFLDVVWICVFSVVYLMGAM >gi|333596726|gb|GL892086.1| GENE 1430 1498590 - 1498916 342 108 aa, chain + ## HITS:1 COG:ECs0483 KEGG:ns NR:ns ## COG: ECs0483 COG3125 # Protein_GI_number: 15829737 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Escherichia coli O157:H7 # 1 108 1 109 109 144 87.0 4e-35 MSHSNDHGASHGSVKTYMTGFILSIILTVIPFWMVMNGSASKPVILGAILVTAVIQILVH LVCFLHMNTKSDEGWNMTAFIFTVIIIAILVVGSIWIMWNLNYNMMVH >gi|333596726|gb|GL892086.1| GENE 1431 1498928 - 1499815 1142 295 aa, chain + ## HITS:1 COG:STM0439 KEGG:ns NR:ns ## COG: STM0439 COG0109 # Protein_GI_number: 16763820 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Salmonella typhimurium LT2 # 1 295 2 296 296 505 95.0 1e-143 MFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYALFIYTLVGVSLVVASGCVFNNYID MDIDKKMERTKNRVLVKGLIAPSVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYV GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTNEFDSGALILLAIFSLWQMPHSYAIA IFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVS VWWLGMALRGYKVEDDKVWARKLFVFSIVAITSLSVMMSVDFMVPDSQNLLTYVW >gi|333596726|gb|GL892086.1| GENE 1432 1499841 - 1500284 332 147 aa, chain - ## HITS:1 COG:STM2978 KEGG:ns NR:ns ## COG: STM2978 COG4154 # Protein_GI_number: 16766282 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Salmonella typhimurium LT2 # 1 140 1 140 140 221 83.0 4e-58 MLKTISPLISPELLKTLAEMGHGDEIIFADAHFPAHSLGPKVIRADGLLVSDLLAAVIPL FELDSYAPPLVMMAPVDGDTLDIRVEARYRHALFGEAEGEGITRIDRYAFYARAQKAYAI VVTGETAKYGNILLKKGVTPHQKKTPG >gi|333596726|gb|GL892086.1| GENE 1433 1500277 - 1501680 962 467 aa, chain - ## HITS:1 COG:fucK KEGG:ns NR:ns ## COG: fucK COG1070 # Protein_GI_number: 16130710 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 2 464 13 475 482 641 67.0 0 MKKCFLVLDCGATNVRAIALDPEGNIVARAAVANESESAAENPAWHQWSLDAIMQRFAVC CQKISAVLSEHDLCGMSVTTFGVDGALVDERGALLYPIISWKCPRTVPVMEAVARSCSPA ELQQITGVGQFSFNTLYKLRWLQDNHPELLQRAHAWLFISSLINHRLTGKMTTDLTMAGT SQMFDLHQRRFSETILSKTGVPHFLFPPLVSPGEMMGELQPDAASRLGLPCGVPVISAGH DTQFALFGAGAGVNEPVLSSGTWEILMARTSQVNTASLVQYPGATCELDSRTGLYNPGLQ YLASGVLEWIRALFWSPDADWDTILTQAAAIPHGADGVTMNTQLLDSPLAGWQGVTLNTT PAHFYRAALEGLTVHLQENLLALEAIAQFKARELLLVGGGSRNRLWNQLKANALGIPVKV LEDADTTVLGASLYGWWGVGETASAEAARDRVHYRYRYFYPEEQTRA >gi|333596726|gb|GL892086.1| GENE 1434 1501730 - 1503508 1657 592 aa, chain - ## HITS:1 COG:fucI KEGG:ns NR:ns ## COG: fucI COG2407 # Protein_GI_number: 16130709 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Escherichia coli K12 # 1 591 1 590 591 1071 85.0 0 MKTIKALPRIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLSEKLRHPCGTPVECVIAD SCIAGMAESAACEEKFSTCHVGLTITVTPCWCYGSETIDMDPLRPKAIWGFNGTERPGAV YLAAALAAHNQKGIPAFSIYGHDVQDAGDEAIPADVEEKLLRFARAGLAVASMKGKSYLS VGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDHKIYDEQELELALDWAQAHFR FGEDKNAAQYRRNEQENAAILRESLLMAMCIRDMMQGNPKLAAMGRVEESLGYNAIASGF QGQRHWTDHYPNGDTAEALLNSSFDWNGIRQPFVVATENDSLNGVAMLFGHLMTGTAQIF ADVRTYWSPESVERVTGQKLTGRAEHGIIHLINSGSAALDGTAEQKDAEGKPTLKPHWDI TEQEASACLAATHWCPAVHEYFRGGGFSSNFLTRGGVPFTMTRVNLIKGVGPVLQIAEGW SVELPEQVHDILNQRTDSTWPTTWFAPRLTGKGPFSDVYSVMANWGANHGVLTVGHVGAD FITLASMLRIPVCMHNVPEALIYRPTAWGAHGMDPEGQDYRACENYGPLYKH >gi|333596726|gb|GL892086.1| GENE 1435 1503917 - 1505416 177 499 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 272 475 147 340 398 72 29 6e-11 MSETLIQMTRITKRFPGVLALNQVDFDLRRGEVHALLGENGAGKSTLMKILSGVYQPDAG EIRFEGQSISFSDPLSAQHAGITIIHQEFNLFPDLTVEENIFIGREFCKNSRWQLDKRAQ RQAVEKILHTLNLKIAPDTRVSELTVAQQQMVEIAKAISVNAKVLIMDEPTAALTESEIE SLFDVTRMLKAQGTGIVYISHRLEELALIADRATVMRDGQYIATVDYETVQIGELIAMMV GRNLDNIYPKRPPPQRREKVLEVNGLSRNGVLHDITFTLWRGEILGLAGLMGSGRTELGR ALFGADAIDGGTLTLNGIPTRIKDVADAIEKGISYLTEDRKKEGLALGLSVEMNIMLGNY PDYAGAAGHVNEKRCREASQKLVDALRIKTPHLEQAALNLSGGNQQKIIIARWVCKDTDI LIFDEPTRGIDVGARREIYELMNRLVAKGKSIIMISSELPEVLGMCDRILVMRSGRIAGE IEAEHATQEKIMQYATLED >gi|333596726|gb|GL892086.1| GENE 1436 1505485 - 1506402 1248 305 aa, chain + ## HITS:1 COG:AGc5111 KEGG:ns NR:ns ## COG: AGc5111 COG1172 # Protein_GI_number: 15890065 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 303 27 343 344 228 48.0 1e-59 MRLAPLLSLVLLVLFFSFSSPFFFNTENIMTIALQTAVIGIMAIGVTFVIITAGIDLSLG SVVAFSGVAVGITAGFGMPLPVCILAGVLAGGVCGYVNAFLVTKMTIPPFIATLGLMMSV RGINMVMTDGRAIYFSDYPQFKLLAQGRLFDILPYPVFYLVIVALIAMWILKKTVMGRYI YAVGSNETAAHLSGINVQRVKIFVYAFCGLLTGVAGVILASRLNSGQPTVGVGYELEAIA AVVIGGTSLMGGVGTIGGTIIGAFIMSVLKNGLNLMGVSQFWQMVAMGVVVVAAVYLDTL RKRMR >gi|333596726|gb|GL892086.1| GENE 1437 1506449 - 1507399 1239 316 aa, chain + ## HITS:1 COG:mlr3334 KEGG:ns NR:ns ## COG: mlr3334 COG1879 # Protein_GI_number: 13472894 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 7 312 16 328 331 179 36.0 5e-45 MKTSHILSALSLVAILSSSALAKDLNLPVVSKGYQHEFWQTVKMGTEAAAKELGDKTSYV GPADETQIAEQIQLVENTMAQKPNGLLLAALDANALAPLVETANSRGIKVVTFDSGVNSD IPASFVATNNRKAGAQAADALAEQVGQKGKVGIIAHVAGTTSAIERSEGFSERMKEKYPN IQVLPVQYSDGDPQKAMDKTIDMVQANPDIAGIYATNEGSTLGVANAIDSQNLKGKVKVI GFDSTEAIINFLKNGVIQGFVVQDAYQIGYQGIKALNAVISGQTVAKEIDIPVKYVNAQN INTPEIDKLLHPFGKK >gi|333596726|gb|GL892086.1| GENE 1438 1507411 - 1509000 1507 529 aa, chain + ## HITS:1 COG:YPO3637 KEGG:ns NR:ns ## COG: YPO3637 COG1069 # Protein_GI_number: 16123779 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Yersinia pestis # 5 527 4 543 545 421 41.0 1e-117 MRDGYFLGVDVGSASVRAGLYSAQGARLSFATRPISQFHASNARVEQSSAEIWQQVCAVV REAVASSGISPDAIRSIGFDATCSLVALDADGNGLSVSPDSPASQDIIMWMDHRAREETV RINATRDPALCYVGGEVSIEMELPKLLWLQRHHPDTWDRAWRFFDLADFLVWKATGQDAA SLCTLTCKWNYLAHEARFSESLLRDVGLETLLTKIPDTILDVAECVGKLSPQAAQALGLH EEVVVASGMIDAHAGGVALTGSHPEGTLALISGTSNCHMLASQTEIHTPGVWGPYWSAML PGYWLTEGGQSAAGALVDWTLREHGASADLFAKAEAAQRHPVALLNDWVAALEQEEKYPT RNLHILADHHGNRSPRSRPDARGSVVGLTLETGERALARLYLATLQAIAYGTRHIMDTLK HHGHSLSRIVICGGATHNRLWLREYADATGCDIHLLAEEDAVTLGAAICGAVASGAWATL TDATREMVKAGDIITRRPETAAFHRQKYEAYLMLWTQQQSLNILMQQEM >gi|333596726|gb|GL892086.1| GENE 1439 1509062 - 1510057 991 331 aa, chain + ## HITS:1 COG:PM1847 KEGG:ns NR:ns ## COG: PM1847 COG1609 # Protein_GI_number: 15603712 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 4 328 10 338 339 140 27.0 3e-33 MAKTVEQIAKDLNLSVTTVRLVLGGKAEQYRISVKTQSRINEHVERFGYTLNHSARSLKL NKTETLGLIVPNISNVFFATLAEKLELRCRRSGYQLMISCTYNDVDYENKLVKALMARNV DGLFIVPSTLENQQHHLRQIQKPLVLLDRDFGFTDNALVESHNEAGGDELARNMLAESKT PLWFLVGDTALPSITDRLNGYLQALKAAGIHHREWVIEGPDNTPEGGYALMDSLIDSQGV PQAFIASSLPVLEGAIEALRTRTGTVPPHINIGTFDEHPMLGFLPNSVWSMQQDEDTWAE KAFELMQRAIDGEAVNETAKVDMKLVKRSRQ >gi|333596726|gb|GL892086.1| GENE 1440 1510085 - 1510732 694 215 aa, chain + ## HITS:1 COG:ECs3660 KEGG:ns NR:ns ## COG: ECs3660 COG0235 # Protein_GI_number: 15832914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 214 1 214 215 374 84.0 1e-104 MERARLARDIIDTCLEMTRMGLNQGTAGNISVRYRDGMLITPTGIPYEHLTEESIVYVDA EGRHEEDKLPSSEWRFHQVVYQTRPDAHAVVHNHAVNCTAVSILNRPIPAIHYMIAAAGG NSIPCAPYATFGTRALSEHVAVALRDRKATLLQHHGLITCEENLEKALWLAQEVEVLAKL YLATLAIVDPVPVLSDEEIAIVLEKFKSYGLRIEA >gi|333596726|gb|GL892086.1| GENE 1441 1510847 - 1512205 1475 452 aa, chain + ## HITS:1 COG:STM0436 KEGG:ns NR:ns ## COG: STM0436 COG0477 # Protein_GI_number: 16763816 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 6 451 1 446 449 700 87.0 0 MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGLAIGIYGLA QAIFQIPFGLLSDRVGRKPLIVGGLAVFIIGSVIAALSDSIWGIILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHALGLNALFWMIAVLAATGIV ITLWVVPDSKNHVLNRESGMVKGSFSKVLAEPRLLKLNVGIMCLHILLMSTFVALPGQLA AAGLSAAEHWKVYLVTMLISFASVVPFIIYAEVKRQMKRVFLGCVTLIVIAEIILWGAGS HFWELIIGVQLFFLAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGW VDGMFDGQTVFLVGALLAMVWLAVASTMKEPPYVSSLRVEIPEGVEINALLQQRLEAKEG VSEVFIVPEERSVYVKIDSKVTNRYEVEQALV >gi|333596726|gb|GL892086.1| GENE 1442 1512611 - 1513300 573 229 aa, chain + ## HITS:1 COG:no KEGG:ECL_04607 NR:ns ## KEGG: ECL_04607 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 229 1 223 223 199 55.0 1e-49 MKKILLASTLALCVTSAFAADPSAVLKVKGTLTNAACTPELSNGGVVDYGMIRLGELSAT ATNQLGQKNIDLTISCASNTKVGFQVDDDRNSSDAYLTVENAYFNGSSASLGFDTYGVGV TDGGVKIGSWAVSARTDSILADGKSVDFISSPDWSDSGAPNWTSNATKGQLSPTRAVYSV AATGTLEPVAFKSVTFPLQVSLAIQNTATLAITDDTAIDGQATITLKYL >gi|333596726|gb|GL892086.1| GENE 1443 1513377 - 1513868 567 163 aa, chain - ## HITS:1 COG:STM0435 KEGG:ns NR:ns ## COG: STM0435 COG1666 # Protein_GI_number: 16763815 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 163 7 169 169 271 94.0 3e-73 MPSFDIVSEVDIQEVRNGVENATREVESRFDFRGVEASFELNDANKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGTSLDVPDEFVHSGKNWFVEAKLKQGIESAVQKKIVKLIKDSKLK VQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNFRD >gi|333596726|gb|GL892086.1| GENE 1444 1513990 - 1514901 1098 303 aa, chain + ## HITS:1 COG:STM0434 KEGG:ns NR:ns ## COG: STM0434 COG1893 # Protein_GI_number: 16763814 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Salmonella typhimurium LT2 # 1 303 1 303 303 546 83.0 1e-155 MKITVLGCGALGQLWLTALCKHGHEVQGWLRVPQPYCSVNLIGEDGSIFNESLTANDPDF LAQSDLLLVTLKAWQVSDAVKALAAQLPPTSPILLLHNGMGTLDELKSVPQPLLMATTTH AARRDGNIIVHVASGVTHIGPAREQDGDYSYLADILQKVLPDVAWHNNIRPQLWRKLAVN CVINPLTALWDCPNGELKNHPQEIATLCEEVASVVEREGLHTSADDLRYYVEQVIDSTKE NISSMLQDVRALRHTEIDYITGYLLKRARAHGIAVPENARLYDQVKRKENEYERVSTGMP RPW >gi|333596726|gb|GL892086.1| GENE 1445 1514864 - 1515457 650 197 aa, chain + ## HITS:1 COG:thiJ KEGG:ns NR:ns ## COG: thiJ COG0693 # Protein_GI_number: 16128409 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli K12 # 1 196 3 198 198 340 87.0 9e-94 MSASALVCLAPGSEEMEAVTTIDLLVRGGITVTTASVASDGNLAVTCSRGVKILADAPLV QVADGDYDIIVLPGGLKGAECFRDSPLLVETVRQFHLSGRIVATLCAAAGTVLVPHDIFP IGNMTGFPALKETIPEDQWVDKRVVWDPRVNLLTSQGPGTAIDFGLKIIDLLVGREKAYE VASSLVMAAGIYNYYEE >gi|333596726|gb|GL892086.1| GENE 1446 1515579 - 1517027 1941 482 aa, chain - ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 402 1 402 402 754 92.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHVEVRAKDENKR LDIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQIEGKTFCVRVKRRGKHEFS SIEVERYVGGGLNQHVETARVRLTNPDVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDNVSDTLILRPLISHDKEHIIDLARKIGTEDFARTMPEYCGVISKSPTIKAVKAKI EAEEENFDFSILEKVVAEASNIDIREIAQQTEQEVVEVETVSGFGANDTILDIRSVDEQD DKPLQVEGVEVVSLPFYKLSTQFGDLDQSKTYLLWCERGVMSRLQALYLREQGFANVKVY RP >gi|333596726|gb|GL892086.1| GENE 1447 1517206 - 1517448 358 80 aa, chain + ## HITS:1 COG:ECs0476 KEGG:ns NR:ns ## COG: ECs0476 COG1722 # Protein_GI_number: 15829730 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 106 90.0 1e-23 MPKKNDAPASFETALSELEQIVTRLESGDLPLEDALNEFERGVQLARQGQVKLQQAEQRV QILLSDSEDAKTTPFTPDAE >gi|333596726|gb|GL892086.1| GENE 1448 1517449 - 1518348 981 299 aa, chain + ## HITS:1 COG:STM0423 KEGG:ns NR:ns ## COG: STM0423 COG0142 # Protein_GI_number: 16763803 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 299 456 85.0 1e-128 MDFTNALQARVVRANDALRRFIEPQPFQNTPLVEAMHYGALLGGKRLRPFLVYATGNMFG ISDNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQTL AFSILSDAPMVEVSDRDRLAMVSELAMASGVAGMCGGQALDLEAEGRQVTLEQLERIHRH KTGALIRAAVRLGALSAGERGRNALPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQG ADQQLGKSTYPALLGLEHAQRKARDLIDDARRSLNELAAQSLDTSALEALADYIIQRDK >gi|333596726|gb|GL892086.1| GENE 1449 1518373 - 1520235 2295 620 aa, chain + ## HITS:1 COG:dxs KEGG:ns NR:ns ## COG: dxs COG1154 # Protein_GI_number: 16128405 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Escherichia coli K12 # 1 620 1 620 620 1205 93.0 0 MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV GHSSTSISAGIGIAVAAEKENKQRRTVCVIGDGAITAGMAFEAMNHAGDIKPDMLVILND NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG TLFEELGFNYIGPVDGHDVLGLVTTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA VPKFDHTSGCLPKSSGGMPSYSKIFGDWLCETAAKDNMLMAVTPAMREGSGMVEFSKKYP DQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDR AGIVGADGQTHQGAFDLSFLRCIPDMVIMTPSDENECRQMLYTGYHYQEGPCAVRYPRGN ALGVELQPLEKLDIGKGLVKRRGEKVAILNFGTLMPEAAKVAENLNATLVDMRFVKPLDE SLILSMAESHDVLVTLEENAIMGGAGSGVNEVLMANRKAVPVLNLGLPDHFIPQGTQDEA RADIGLDAAGIEAKIRTWLA >gi|333596726|gb|GL892086.1| GENE 1450 1520298 - 1521272 1180 324 aa, chain + ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 590 87.0 1e-168 MQYTTLGKTDLKVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIRRAIDGGINFFDTANS YSDGSSEEIVGRALRDFARRDDIVVATKVYYPSGDLAEGLSRAQILRSIDDSLRRLNMDY VDLLQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALDLQAQHGWARFV TMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY DDTEASDALIAERLAGIADDIGATRAQVALAWLLSKRGVAAPIVGTSREEQLDELLSAVD LSLTPEQIAELETPYQQHPVVGFK >gi|333596726|gb|GL892086.1| GENE 1451 1521372 - 1522343 1151 323 aa, chain - ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 1 323 1 323 325 548 85.0 1e-156 MACGEFSLIARYFDRVRTSRLDVETGIGDDCALLNIPEKQTLAISTDTLVCGRHFLPDID PADLAYKALAVNVSDLAAMGADPAWLTLALTLPEVDEAWLEAFSDALFEQLNYYDMQLIG GDTTAGPLSMTLAIHGYVPAGRALKRSGAKPGDWIYVTGTPGDSAAGLAILQNRLAVEDA DDAAYLVKRHLRPTPRILHGQALRERASSAIDLSDGLISDLGHILKASGVGARIDLDLFP LSEQLLRHAGPEQALRWALSGGEDYELCFTVPELNRGTLDVALAHLGAKFTCIGQVMPES EGLLFVRDGSPVTLDWKGYDHFA >gi|333596726|gb|GL892086.1| GENE 1452 1522421 - 1522840 406 139 aa, chain - ## HITS:1 COG:STM0418 KEGG:ns NR:ns ## COG: STM0418 COG0781 # Protein_GI_number: 16763798 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 241 97.0 2e-64 MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLSEQDVKDVDVLYFRELLSGVATNSA YLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRDDVPYKVAINEAIELAKTFGAEDSH KFVNGVLDKAAPAIRPHKK >gi|333596726|gb|GL892086.1| GENE 1453 1522862 - 1523332 553 156 aa, chain - ## HITS:1 COG:ECs0468 KEGG:ns NR:ns ## COG: ECs0468 COG0054 # Protein_GI_number: 15829722 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 250 97.0 8e-67 MNIIEAAVATPDARVAITIARFNNFINDSLLEGAVDALKRIGQVKDDNITVVWVPGAYEL PLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDAEIPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|333596726|gb|GL892086.1| GENE 1454 1523420 - 1524523 1210 367 aa, chain - ## HITS:1 COG:ribD_2 KEGG:ns NR:ns ## COG: ribD_2 COG1985 # Protein_GI_number: 16128399 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Escherichia coli K12 # 144 367 1 224 224 381 83.0 1e-105 MHDEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAG EKARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGI DVSHGLMMQDAEAINKGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARRDV QRLRAQSHAILTSSETVLADDPAMTVRWDELNADTQALYPQENLRQPLRIIIDSQNRVMP EHRIVQQPGETWIARTKEDTRDWPQGVRSIMVPEHNGHLDLVVLMMLLGKQQVNSIWVEA GPTLAGALLQAGLVDELLVYVAPKLLGYDARGLFVLPGLEKLADAPQLTFSEIRPVGPDV CLHLTTA >gi|333596726|gb|GL892086.1| GENE 1455 1524528 - 1524977 500 149 aa, chain - ## HITS:1 COG:STM0415 KEGG:ns NR:ns ## COG: STM0415 COG1327 # Protein_GI_number: 16763795 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Salmonella typhimurium LT2 # 1 149 1 149 149 265 93.0 2e-71 MHCPFCSAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP FNEEKLRSGMLKALEKRPVSSDDVEMALNHIKSYLRGLGEREVPSKMIGNLVMEQLKKLD KVAYIRFASVYRSFEDIKEFGEEIARLQD >gi|333596726|gb|GL892086.1| GENE 1456 1525130 - 1525669 539 179 aa, chain + ## HITS:1 COG:no KEGG:ECL_01170 NR:ns ## KEGG: ECL_01170 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 179 22 200 200 306 93.0 3e-82 MTRRYLKIVLVGSLFTLSACAQQSEVREMKQSVNTLNVAMDKLNKETVKITQQNALNAKS SNGVYLLPGANTPARLNSQIGTLKMSLVNVAANADGTRATLRIQGESNDPLPAFSGTVEW GQIQGTTENYQEVNVKNQLFTAPASTLAPSDVDIPIQLSGLTPEQLGFIRIHDIQTTAQ >gi|333596726|gb|GL892086.1| GENE 1457 1525938 - 1526822 1258 294 aa, chain + ## HITS:1 COG:ECs0464 KEGG:ns NR:ns ## COG: ECs0464 COG3248 # Protein_GI_number: 15829718 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 488 92.0 1e-138 MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE YEAFAKKDWFDFYGYMDAPVFFGGNTDAKGIWNHGSPLFMEIEPRFSIDKLTGTSLAFGP FKEWYFANNYIYDMGRNKSGRQSTWYMGLGTDIETGLPMSLSMNVYAKYQWQNYGAANEN EWDGYRFKVKYFVPITQLWGGNLSYIGFTNFDWGSDLGDNDFRDLNGKKARTNDSIASSH ILALNYDHWHYSVVARYWHNGGQWNDDASLNFGNGDFSVRSTGWGGYLVVGYNF >gi|333596726|gb|GL892086.1| GENE 1458 1526948 - 1527628 648 226 aa, chain - ## HITS:1 COG:STM0410 KEGG:ns NR:ns ## COG: STM0410 COG2378 # Protein_GI_number: 16763790 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 226 1 226 230 364 84.0 1e-101 MTRRADRLFQIVQILRGRRLTTAAHLAERLGVSERTVYRDIRDLSLSGVPVEGEAGSGYR LMSGFDLPPLMLTNKESEALMVAIRLLKTWGGESLSRELESAQEKVLAILPEESRRKAEQ TRIYAPDIALQPHSRSGFDVIHQAISALRVLALHYRDEAGQLTWREVQPLGLFFWGEHWL LAAWCERRDDYRCFRLDRCLHITLTERRFSESADRSLADFLRKVKQ >gi|333596726|gb|GL892086.1| GENE 1459 1527639 - 1528004 400 121 aa, chain - ## HITS:1 COG:STM0409 KEGG:ns NR:ns ## COG: STM0409 COG3324 # Protein_GI_number: 16763789 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Salmonella typhimurium LT2 # 1 120 1 120 121 157 63.0 4e-39 MKSVINWFEIPVSDMDRAIKFYEPVMQLALRREKMDCAELAVFPHEDPYTGGALAKFDGI TPSLQGAIIYLHTDNLAATLDRVASAGGECVFGPLELPQGIGTIALFTDSEGNRVGLHQP V >gi|333596726|gb|GL892086.1| GENE 1460 1528143 - 1529057 1340 304 aa, chain - ## HITS:1 COG:STM0408 KEGG:ns NR:ns ## COG: STM0408 COG0341 # Protein_GI_number: 16763788 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Salmonella typhimurium LT2 # 1 304 20 323 323 521 89.0 1e-148 MRWDYWAFGISGLLLILSIAVMGVKGFNWGLDFTGGTVIEITLEKPVDMDQMRESLQKAG FEEPLLQNFGSSRDIMVRMPPVHDANGSQELGSKVVQVINETTSQDATVKRIEFVGPSVG ADLAQTGAMALLVALISILVYVGFRFEWRLAAGVVIALAHDVVITMGILSLFHIEIDLTI VASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVI LMLFLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHLLQQKVEKEGADQP SILP >gi|333596726|gb|GL892086.1| GENE 1461 1529125 - 1530939 2393 604 aa, chain - ## HITS:1 COG:ECs0459 KEGG:ns NR:ns ## COG: ECs0459 COG0342 # Protein_GI_number: 15829713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Escherichia coli O157:H7 # 1 604 12 615 615 1068 94.0 0 MLVVVIIVGLLYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE GAILARFDTTDTQLRAREALMGVLGDKYVVALNLAPATPRWLAALNAEPMKLGLDLRGGV HFLMEVDMDTALGKLQEQNIDSLRSDLRDKGIPYTTVRKEDNYGMSITFRDSAARDQAVT YLSQRHRDLVITSQGSNQLRAVMTDARLSEAREYAVQQNINILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDQAAAASGRVPGDSEVKQTREGQ PVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE YKDSGKKDANGRAVLVKEEEVINIANIQSRLGNSFRITGISNPNEARQLSLLLRAGALIA PIQIVEERTIGPTLGMQNIKQGLEACLAGLAVSIIFMIFFYKKFGLIATSALIANLVLII GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAIEEGYKGAFS SIFDANVTTLIKVLILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVK KLSI >gi|333596726|gb|GL892086.1| GENE 1462 1531000 - 1531332 531 110 aa, chain - ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 198 98.0 2e-51 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKNLMNSIAKGD EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL >gi|333596726|gb|GL892086.1| GENE 1463 1531355 - 1532482 1074 375 aa, chain - ## HITS:1 COG:STM0405 KEGG:ns NR:ns ## COG: STM0405 COG0343 # Protein_GI_number: 16763785 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 375 1 375 375 785 98.0 0 MKFELDTTDGRARRGRLVFDRGVVETPAFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPI FLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRDRFDSLQNKN ALFGIIQGSVYEDLRDISVKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPADKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKHKSDTSPLDS ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTD FYQRQGRDVPPLNVD >gi|333596726|gb|GL892086.1| GENE 1464 1532536 - 1533606 1328 356 aa, chain - ## HITS:1 COG:ECs0456 KEGG:ns NR:ns ## COG: ECs0456 COG0809 # Protein_GI_number: 15829710 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 676 94.0 0 MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESIKATMT ARHDALFEVEFNDERTVLDILNAIGHMPLPPYIERPDEEADRELYQTVYSQKPGAVAAPT AGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSIEDHIMHSEYAEVPQEVVDAV LAAKARGSRVVAVGTTSVRSLESAAQAAKSELIEPFFGDTQIFIYPGYQYKVIDALVTNF HLPESTLIMLVSAFAGYQHTMNAYKSAVEQKYRFFSYGDAMFITYNPQALNERVGE >gi|333596726|gb|GL892086.1| GENE 1465 1533699 - 1534280 569 193 aa, chain + ## HITS:1 COG:STM0403 KEGG:ns NR:ns ## COG: STM0403 COG3124 # Protein_GI_number: 16763783 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 291 82.0 4e-79 MNFLAHLHLAHLADSSLSGNLLADFVRGNPAEDYSQEVVDGIFMHRRIDVLTDNLPEVTE AKAWFRPETRRVAPITLDVMWDHFLSRHWLQLSPDMSLPEFVRYAHAQVSIILPDSPPRF VNLNNYLWSERWLERYHEMDFIQNVLNGMASRRPRLDALRDSWHDLDEHYDALETRFWQF YPRMMAQAKNKEL >gi|333596726|gb|GL892086.1| GENE 1466 1534408 - 1535010 712 200 aa, chain + ## HITS:1 COG:STM0402 KEGG:ns NR:ns ## COG: STM0402 COG0450 # Protein_GI_number: 16763782 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 200 1 200 200 391 92.0 1e-109 MVLVTRPAPDFTAAAVLGNGEIVENFNFKQHTNGKATVLFFWPMDFTFVCPSELIAFDKR YEEFQKRGVEVVGVSFDSEFVHNAWRNTPVENGGIGAVKYAMVADIKREIQQAYGIEHPD AGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDALQFHEEHGEVCPAQWEKGKE GMAASPDGVAKYLSENVSSL >gi|333596726|gb|GL892086.1| GENE 1467 1535067 - 1536446 1191 459 aa, chain - ## HITS:1 COG:no KEGG:CKO_02759 NR:ns ## KEGG: CKO_02759 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 459 1 464 464 484 56.0 1e-135 MKWMKAVCCSALLALAGPAFSEGAPAESPRDYAYGLSLDTSASSPWYRVMLPLAVYQQST SPDLRDVRVFNQSGEPVPFSLITTTRPQSAPTTTALRLFALNVSPGGEEGSGDKIMLRAR NGVEIVLEGQHAAPSGQHYLLTLPENATEVPLSQLQLNWDTPDGSWQGTASVYYSEDLKN WYTLREEMPLLDVVSGQDRLKLDRIDTDLVLSPEANRYLLLVLNTGRSALTLTGVNAINI PAQPESEHISLAGEGERLSESEAVWRWTRPQPLSAIGFMLNGEGVLPAEIAWRGADKDRW HTLKKEVIYQLGGKTSEPVPLSGGLVEAVKIKTLNARLPENLPGVIGQRVRYDLVFNAQG KGPYLLAWGNGAAKPASVETDMLIPAGLRKTYDLAALPVADTLEPVPLGGEARLTAMSAA EQESRLKTLMVWGVLIAGVMVLAGMAWRIWREVKKDGAA >gi|333596726|gb|GL892086.1| GENE 1468 1536443 - 1539052 2751 869 aa, chain - ## HITS:1 COG:RSc0786 KEGG:ns NR:ns ## COG: RSc0786 COG5373 # Protein_GI_number: 17545505 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 63 869 116 935 938 360 36.0 6e-99 MDELYILGCLFLVFALVVAPVLAVIGFNRSTAARQEIARLRQRIEALELRGVADKAPERV QTAAPLEEPAPVAEAVTAPVDPWRPAPPVTEAEPAPVQAAKRPSAFGGILTSLTRWFMQG NPLAKLGIVLLFLGLSFLLRYTVEHSLFPLELRLAATALFAMVLLVIGWRLRHRQRIYAL ILQGGATGVLYLTVFGAFRLWQMLPMTLAFALLVVICAASVGLAVLQKALSLAMLASLGG YLAPLLLSTGGGSFVALFSFYLLLSIGILVISIWQHWRELNLLGLLFTFGVGGVWGLSDY QPEDYVICQLFLIANTLIFGVFSVALSLRAQEKGKQIIDGVLLFAPPLVGFGMQYGMTSH WTYGPAIGALGYGAFYLSLAFLALRRYPSIGRPLVMAALAIGGGFATLAIPLALSARWTA MAWALEGLGILWLGVQQQQRRMSYSGTALLVLALGSAIWAQMDGVTSLSLLLIFAVLSLC WLAAAWLWRKIALPGSWVLLAGGLLFWLVALLGASQLIVKQELSVLAGVLALTAASAWGW RQAAARLAWRELDASKWLLWPVMLLMVLYQVWQQQILAAGWANLAWGIALPAALMLLRRD EDKLLARTSMGLHLSLVWMILLALAAELYWFARSLPWGMAAWGSGIAMAVGSGVIMALSA AVRRRVWPFRAWPALYACLAMIPVVVALMVLLVVTNFQDGVVYRQTWLPLVNPLEEGAAF ALLGLVVFYRAVDRYYPASLAQSRPWPAVVLMAFGFWWLNGALLRALAWYGEVAWNMESL WHSRLIQTTFALFWMFCALVVMIRATRRASRQEWLGGAVLLGVVMLKLMLVDSAGGGGLA RAVAFIGVAILVLIVGYFSPLPPKAGEEK >gi|333596726|gb|GL892086.1| GENE 1469 1539144 - 1540961 1863 605 aa, chain - ## HITS:1 COG:malZ KEGG:ns NR:ns ## COG: malZ COG0366 # Protein_GI_number: 16128388 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 602 2 603 605 1040 81.0 0 MLNAWHLPVAPFVKQNKDNLVITLWLAGDNQPERVTLRAEVDNEETSLKMHKVRSQPQPG VTAWRANIDLCSGQPRRRYSFKLLWNNRQLWFTPQGFSRFPPARLEQFAVDHPDNGPQWV NDQVFYQIFPDRFARSEKRTADQDKVYYHHAVGHDIILKKWDEPVTAQAGGSTFYGGDLD GISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTQDYRHVDEQFGGDEALLRLRHNTQKEG MRLILDGVFNHSGDSHAWFDRHNQSMGGACHNPDSPQRDWYSFDENGRALDWLGYPSLPK LDFQSPSLVNEIYGGDDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNLQHVAAITRS AKAARSEAFVFGEHFGDARQWLQADAEDAAMNYRGFTFPLWGFLANTDISYDPQHIDAET CMAWMENYRAGLSHQQQLRMFNQLDSHDTARFKSLLGKDVARLPLAVTWLFTWPGVPCIY YGDEVGLDGNNDPFCRKTFPWGSEKQDRDLFSLYQRMATLRKQSQALRYGGCQVMYAHDN VVVFVRVYNQQRVLVAINRGEACEVVLEDSPLLAGKTWKSKEGKATFQESVLSLPGISAA VWFGS >gi|333596726|gb|GL892086.1| GENE 1470 1541125 - 1542498 1968 457 aa, chain - ## HITS:1 COG:STM0400 KEGG:ns NR:ns ## COG: STM0400 COG1113 # Protein_GI_number: 16763780 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 768 95.0 0 MESTNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGAAAYIIMR ALGEMSVHNPSASSFSRYAQENLGPLAGFITGWTYCFEILIVAIADVTAFGIYMGVWFPA VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMILAGFGIIIWGIGNGGQ PTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGIAFAASILNFVVLTASLSAINS DVFGVGRMLHGMAEQGSAPKVFAKTSRRGTPWVTVVVMTVALLFSVYLNYIMPENVFLVI ASLATFATVWVWIMILLSQIAFRRRLSPEEAKALKFKVPGGVATTIVGLIFLVFIIGLIG YHPDTRISLYVGFAWIVLLLIGWVFKCRRDRQLAEAQ >gi|333596726|gb|GL892086.1| GENE 1471 1542580 - 1543899 1726 439 aa, chain - ## HITS:1 COG:STM0399 KEGG:ns NR:ns ## COG: STM0399 COG1114 # Protein_GI_number: 16763779 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 439 1 439 439 695 91.0 0 MTHHLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLLTAVGLPVLTV IALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAM PLFIYSLIYFAIVILVSLYPGKLLDTVGNFLAPLKIVALIVLAVAAIVWPAGPISTAMDA YQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTIWAGLMAGVGLT LLYLALFRLGSDSATLVDQSANGAAILHAYVQHTFGGAGSMLLAALIFLACLVTAVGLTC ACAEFFAQYLPLSYRTLVFILGIFSMAVSNLGLSHLIQVSIPVLTAIYPPCIVLVVLSFT RPWWHSSTRIIAPAMFISLIFGILDGIKASAFADILPAWTQRLPLSEQGLAWLMPSVVAL VLAIIWDRAAGRQVATNAH >gi|333596726|gb|GL892086.1| GENE 1472 1544309 - 1545604 1191 431 aa, chain - ## HITS:1 COG:STM0398 KEGG:ns NR:ns ## COG: STM0398 COG0642 # Protein_GI_number: 16763778 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 428 1 428 431 756 85.0 0 MLERLSWKRLVFELILCCIPALILGAIFGYLPWFLLVAVTGLLVWHFWNLLRLSWWLWVD RSMTPPPGSGSWEPLLYGLHQMQMRNKKRRRELGSLIKRFRSGAESLPDAVILTTEEGTI FWCNGLAQQLLGLRWPDDNGQNILNLLRYPEFTLYLKKRDFSRPHNLKLNNGRHLEIRVM PYSDRQWLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMQEQTLEGAPRE KALHTMREQTFRMEGLVKQLLTLSKIEAAPSLALNDIIDVPMMLRVVEREAQTLSHNQHT LAFDVDNTLKVLGSEDELRSAISNLVYNAVNHTPKGTHITVCWQHTLAGAEFSVEDNGPG IGPEHLPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVSHHESRLNIESTLGKGTRFSFV IPERLIAKKRA >gi|333596726|gb|GL892086.1| GENE 1473 1545626 - 1546315 848 229 aa, chain - ## HITS:1 COG:STM0397 KEGG:ns NR:ns ## COG: STM0397 COG0745 # Protein_GI_number: 16763777 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 442 96.0 1e-124 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS GLQFIKHIKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEMQGLSLDPTSHRVMTGENPLDMGPTEFKLLHFFMTHPERVYSREQLL NNVWGTNVYVEDRTVDVHIRRLRKALELSGHDRMVQTVRGTGYRFSTRF >gi|333596726|gb|GL892086.1| GENE 1474 1546503 - 1547708 1158 401 aa, chain + ## HITS:1 COG:ECs0448 KEGG:ns NR:ns ## COG: ECs0448 COG0420 # Protein_GI_number: 15829702 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Escherichia coli O157:H7 # 1 399 1 399 400 663 81.0 0 MRILHTSDWHLGQNFYSKSRAAEHDAFLNWLLETAQAHEVDAIIVAGDIFDTGSPPSYAR ELYNRFVVNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRDG TPGAVLCPIPFLRPRDIVQSQAGLSGSEKQQHLLQAITHYYHQQHTQACALRGDQAIPII ATGHLTTVGASKSDAVREIYIGTLDAFPAQNFPPADYIALGHIHRAQVIGGCEHIRYCGS PVSLSFDETGKAKSVHLVSFTDGKLSAVETLEVPVTQPLAVLKGDLAAITEQLEQWRGAE LDPPVWLDIEIITDEYLHDMQRKIQALTEDLPVEVLLVRRSREQREKILLSAQRETLSEL RAEEVFERRLAHEEMDDARRVRLNELFIQTLHALNDEEENA >gi|333596726|gb|GL892086.1| GENE 1475 1547705 - 1550836 3181 1043 aa, chain + ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 1 1043 1 1047 1047 976 64.0 0 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR LNKVSQAQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNQPDGNLQAPRVELARCE DGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNAKPGDRAELLEELTGTE IYGQISAMVFEKHKAARNALERCEAQAAGVVLLSEEQQQHLQQRLQALTDEEKILLAQQQ SQQKDFQWIARNDELIREQQRAAASQQQVQQALTDAAPQLAKLQLAQPAAQLRPLWEHQQ EQTTRLAQTTARIVEVNTRLLDRAAQRSRIRNGALRNREQLQTEHTALTQWLTEHDRFRQ WGQEIAGWRAHFAQLSRDKNQLAAQAARMAELRQKLAEMPESTLSLTAEDLATAMEQQAQ SRALRQRLTALHARYQPLQKRLRQNAESVQKAQAEQVKLNDTLTLRRQQYKEKNQHLADL KALCEREATIKDLENYRAQLEAGKPCPLCGSREHPAVVQYQALELTDNQRRRDALEKEVA ALKEEGLLVLGQVNALTQQIQRETDEAQALTQEEQALTQEWLEVCTSLNIALNIQDDIAP WMHEQEQYERQLYQFSQRLTLQNQLNEQEGQARQYQQQLTATRQALAASLESLSLNVPDE GAESAWLSARESEYSRWQEKQTQHVTIQERINALTPVLDTLPVSDDAEADAVIPENWRGI HDECVSLQSQLTTLQQQESLERERLQQSQAQFSAALTASCFADREAFLSALLDEASIRQL EQQKQTLENQLQQATALSVQASQQLEAHQAQRPEGLETDAATLQTRLHQLAQQLRDNTTH QGEIRQQLKQDADNRLHQQALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLD NLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALAL ALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIP VQIKVKKINGLGYSRLDREFAVQ >gi|333596726|gb|GL892086.1| GENE 1476 1550979 - 1551971 281 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 32 327 6 316 319 112 30 5e-23 MITNCRIACIANREAGFYSVDNQKNEECLVRIGIDLGGTKTEVIALSEQGEQLFRHRLPT PRDDYHQTLETIARLVDMAEQATGETGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKD LSQRLNREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFGGRSHIGGNGT AGEWGHNPLPWMDEDELKYRAEVPCYCGKQGCIETFISGTGFATDYHRLSGQPLKGNEIM RLVEEQDPVAELALSRYEMRLAKSLAHVINILDPDVIVLGGGMSNVDRLYATVPTLVKQW VFGGECETPIRKAVHGDSSGVRGAAWLWPE >gi|333596726|gb|GL892086.1| GENE 1477 1552008 - 1552922 1198 304 aa, chain + ## HITS:1 COG:STM0392 KEGG:ns NR:ns ## COG: STM0392 COG2974 # Protein_GI_number: 16763772 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Salmonella typhimurium LT2 # 1 304 1 303 303 543 92.0 1e-154 MLWFKNLMVYRLSRDVSLRAEEMEKQLAAYSFTPCGSQDMAKTGWVPPMGSQSDALTHAS STGQIIVCARKEEKILPTPVVKQALEAKIFKLEAEQGRKLKKTEKDSLKDEVLHSLLPRA FSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLALETPIELTLTEW VRSGTAAQGFQILDEAELKALLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQR IQFVMCDDGSVKRLKFCDELRDQNEDIDREDYAQRFDADFILMTGELAALIQNLVEGLGG EAQR >gi|333596726|gb|GL892086.1| GENE 1478 1552970 - 1553257 377 95 aa, chain - ## HITS:1 COG:STM0391 KEGG:ns NR:ns ## COG: STM0391 COG3123 # Protein_GI_number: 16763771 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 159 92.0 9e-40 MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEAEEMTVVSGALNVLLPGET EWKVYSAGQVFNVPGHSEFHLQVAEPTSYLCRYLK >gi|333596726|gb|GL892086.1| GENE 1479 1553329 - 1554006 803 225 aa, chain - ## HITS:1 COG:no KEGG:ECL_01148 NR:ns ## KEGG: ECL_01148 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 224 1 224 225 365 90.0 1e-99 MKATLAILTIGVVPVSEVLPLLTEHVSEQQITHFSLLGKLSREEVMEDYAVGEGEDPLAT LLSDGKLAHVSRQKIERALQGVIEVLDNQDYDVILLMSTAPVKGLSARNAILLEPMRIIP PLVASIVDGHQVGVIVPVEELLDNQTVKWAALEHTPLYALANPFWDSEAKLIAAGQELID RGADVLMLDCLGFHQRHRDLLQKALDVPVLLSNVLMARLASELLV >gi|333596726|gb|GL892086.1| GENE 1480 1554243 - 1554434 106 63 aa, chain - ## HITS:1 COG:no KEGG:ECL_01147 NR:ns ## KEGG: ECL_01147 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 63 1 63 63 95 98.0 6e-19 MPTRPPYPREARIVTVEKGNGDQTVTWYQLRADHPKPDSLISEHETEQEALDAKRRYEDP EKS >gi|333596726|gb|GL892086.1| GENE 1481 1554479 - 1555003 503 174 aa, chain - ## HITS:1 COG:STM0388 KEGG:ns NR:ns ## COG: STM0388 COG0703 # Protein_GI_number: 16763768 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Salmonella typhimurium LT2 # 1 168 1 168 181 218 64.0 3e-57 MNPPIFLVGPRGCGKTTVGLALARLCQSQFVDTDHWLQENAGQTIADIVENEGWESFRAR ETATLEAVTVPSTVIATGGGIILAPYNRQFMREKGVVIYLCAPVSTLVGRLEAFPEEGQR PALTAKPLSEEVSDVLAERDALYREAAHHVVDASASPEKVAIQIITALRLACAS >gi|333596726|gb|GL892086.1| GENE 1482 1555148 - 1555606 523 152 aa, chain - ## HITS:1 COG:ECs0436 KEGG:ns NR:ns ## COG: ECs0436 COG1671 # Protein_GI_number: 15829691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 149 41 189 192 251 83.0 4e-67 MAIWVDADACPNMIKEILFRAAERVQMPLTLVANQNIRVPPSRYIRSLRVPAGFDVADNE IVRLCDAGDLVITADIPLAADVLAKGAAALNPRGERYSPATIREKLTMRDFMDTLRSSGV QTGGPDSLSQRDRQQFAAELDKWLLEVKRRPA >gi|333596726|gb|GL892086.1| GENE 1483 1555704 - 1556513 1177 269 aa, chain + ## HITS:1 COG:STM0386 KEGG:ns NR:ns ## COG: STM0386 COG0345 # Protein_GI_number: 16763766 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Salmonella typhimurium LT2 # 1 269 1 269 269 465 92.0 1e-131 MDKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALRDEYGVNAAESAQEV AQVGDIVFGAVKPNIMIKVLSEITSSLNKETLVVSIAAGVTLDQLARALGHDRKIVRAMP NTPSLVNAGMTSVTPNALVTSEDVADVLNIFRCFGEAEVIAEPMIHPVVGVSGSAPAYVF MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGKHPGELKDMVCSPGGTTIEAV RVLEDRGFRSAVIEAMEKCMEKSEKLSKS >gi|333596726|gb|GL892086.1| GENE 1484 1556530 - 1557630 895 366 aa, chain - ## HITS:1 COG:STM0385_2 KEGG:ns NR:ns ## COG: STM0385_2 COG2199 # Protein_GI_number: 16763765 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Salmonella typhimurium LT2 # 196 366 1 171 171 276 77.0 3e-74 MNDEFYDTHENIREAWYQQLSQDDSYRSGLRFARRIRLARIVGLAALFVPLASVLVSQFL SGVWWLLLVGWVFVWPHLAWQLAFRSAEPHSREVVNLKVDAIVAGVWMGLTGCNALPAAA LIVMIGMNMMGSGGCRLFLSGVALLALSALLTVQFTGTPVVLTSEPLTLWLTLPVLMVYP MLFAWLSHRTAIRLAEHKRRLELMSTRDGMTGVFNRRHWETLLRNEFETCRRSHRQATIL LIDIDHFKTINDTWGHDVGDEAIVAITRQLQLTLRSGDYIGRFGGDEFAVIMSGTPADSA IAAMSRVHERLVNMPLHGAPMARLCISVGVAPWGAQFTHYREWLKAADVALYKAKNAGRG RTEVAA >gi|333596726|gb|GL892086.1| GENE 1485 1557736 - 1558056 413 106 aa, chain - ## HITS:1 COG:no KEGG:ECL_01142 NR:ns ## KEGG: ECL_01142 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 106 1 106 106 140 92.0 1e-32 MKTTILVTLLSGLCLVASAHAEEKTLTPQQQRMTTCNQQATSQSLKGDARKTYMSDCLKN GATKPGEKSLTPQQQKMRECNAQATQQMLKGDDRSKFMSACLKKQA >gi|333596726|gb|GL892086.1| GENE 1486 1558350 - 1558610 359 86 aa, chain - ## HITS:1 COG:no KEGG:ROD_04261 NR:ns ## KEGG: ROD_04261 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 85 20 104 105 99 72.0 4e-20 MKNLIAELLVKLAQKEEESKELVAQVEALEIVVTALLRQMAKPEQEALIDNVEGALEKAR PDSQVPAEDAELLQQYVKKLLRHPRS >gi|333596726|gb|GL892086.1| GENE 1487 1558819 - 1560033 1161 404 aa, chain - ## HITS:1 COG:STM0382 KEGG:ns NR:ns ## COG: STM0382 COG0477 # Protein_GI_number: 16763762 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 401 1 401 403 598 87.0 1e-171 MESWKVNLISVWFGCFFTGLAISQILPFLPLYVSQLGVTSHEALSMWSGLTFSVTFLVSA IVSPMWGSLADRKGRKLMLLRASLGMAIAILLQAFATNVWQLFILRAIMGLTSGYIPNAM ALVASQVPRERSGWALSTLSTAQISGVIGGPLLGGFLADHVGLRAVFIITAILLTISFLV TLFLIKEGGRPVVSKSERLSGKAVFASLPYPGLMISLFVTTMVIQLCNGSVGPILALFIK SMEPDSSNIAFLSGMIAAVPGVSALMSAPRLGKLGDRIGTARILMATLIIAVILFFAMSF VTTPLQLGILRFLLGFADGAMLPAVQTLLVKYSSDQVTGRIFGYNQSFMYLGNVAGPLIG ASVSAMAGFRWVFAATAVVVLLNIIQLAFALRRRRQIAESKSAR >gi|333596726|gb|GL892086.1| GENE 1488 1560203 - 1560910 341 235 aa, chain - ## HITS:1 COG:STM0381 KEGG:ns NR:ns ## COG: STM0381 COG3921 # Protein_GI_number: 16763761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 235 8 237 237 335 71.0 5e-92 MRDVEGGRVKGKSLLILIIIAGIATVGYRWLPPHYNPFVPLTLDDPPGKITQFKLRRLTP QACESLLAQANQRRLIRTQAVADSAGECPLSNVVRVRDFGPVSLNSSFLASCPLALSSAL FVSQQARPLTKTWTGSELTRIEHLGSFACRNIYSRPDARRSEHATADALDISAFRLANGQ RVTVLNGWKAEKTQPWLQALLSASCGYYGNGLGPDYNAAHANHFHLGMRGYGLCR >gi|333596726|gb|GL892086.1| GENE 1489 1560991 - 1562088 1513 365 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 606 82.0 1e-173 MAKQRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVNDASQYLLH ADDPAHIALNPSDISVATVPGVAQGQLIDAGNAQALAQIDVVFPIVHGTLGEDGSLQGML RMANLPFVGSDVLGSAACMDKDVTKRLLRDAGLNIAPFVTLTRANRDKHSFAQIQAQLGL PLFVKPANQGSSVGVSKVTSEAQFNDAVRLAFEFDHKVVVEQGINGREIECAVLGNDFPQ ASTCGEVVLNSDFYSYDTKYIDDKGAQVVVPAALDPDVNDRIRAIAIEAWQALGCSGMAR VDVFLTPDNEVVINEINTLPGFTNISMYPKLWQASGISYQELITRLIELALERHAADSAL KSSVN >gi|333596726|gb|GL892086.1| GENE 1490 1562092 - 1562313 350 73 aa, chain - ## HITS:1 COG:no KEGG:ECL_01136 NR:ns ## KEGG: ECL_01136 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 70 1 70 78 125 95.0 5e-28 MKLTSKLRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGFIIR RRPDETTAAEKAD >gi|333596726|gb|GL892086.1| GENE 1491 1562562 - 1562864 293 100 aa, chain + ## HITS:1 COG:no KEGG:ECL_01135 NR:ns ## KEGG: ECL_01135 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 1 100 1 100 100 176 87.0 4e-43 MADFTLSKPIFGGKQPKTSTAGNIAYALFVLFCFWAGTQLLNMLVHAPGVYEHLMQVQDT GRPRVEIGLGVSTVFGLIPFLAGSMVLGVIALVLRWRSRH >gi|333596726|gb|GL892086.1| GENE 1492 1562865 - 1563962 1109 365 aa, chain - ## HITS:1 COG:no KEGG:ECL_01134 NR:ns ## KEGG: ECL_01134 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 364 1 364 365 665 93.0 0 MPFAVPRALPLTLLAAFVLAGCAEKGAAPLKEGEKPVDVASVVRQKMPASVKDRSAWADA LATTFKSQKIAPTEENICSVLAVAQQESMYQSDPVVPGLNKIAWKEIDRRAESMHIPVFL VHTALKITSPNGKSYSERLDTVKTEKQLSAIFDDFINMVPMGQKLFGSLNPVHTGGPMQV SIAFAEKHTDGYPWDIDGTVRQEVFSLRGGLWFGTYHLLNYPASYDKPLYRFADFNAGWY ASRNAAFQNAVSRASGVKLALDGDLIAYGSSEAGTTERAVRKLSTTLEMSNSDIRRQLEK GDSLAFEKTDLYKQVFALAEKKSGKALPRAILPGIQLESPKITRNLTTAWFAKRVDDRRA RCMGL >gi|333596726|gb|GL892086.1| GENE 1493 1563976 - 1565196 1464 406 aa, chain - ## HITS:1 COG:STM0376 KEGG:ns NR:ns ## COG: STM0376 COG1133 # Protein_GI_number: 16763756 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Salmonella typhimurium LT2 # 1 405 1 405 406 710 90.0 0 MFKSFFPKPGPFFLSAFIWALLAVIFWQAGGGAWLTRLTGATGDIPISAARFWSMSYLLF YAYYVLCVGLFAMFWFVYSPHRWQYWSILGTSLIIFVTWFLVEVGVAVNAWYAPFYDLIQ TALSSPHKVTINQFYHEVGIFLGIALIAVVIGVMNNFFVSHYVFRWRTAMNEHYMAHWQH LRHIEGAAQRVQEDTMRFASTLEDMGVSFINAIMTLIAFLPVLVTLSSHVPELPIVGHLP YGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDANRASPPTVRE LFGAVRRNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFG QVRGSFQYLISSWTTLVELMSIYKRLRSFERELDDKDLQEVTHTLG >gi|333596726|gb|GL892086.1| GENE 1494 1565547 - 1566707 932 386 aa, chain + ## HITS:1 COG:ECs0426 KEGG:ns NR:ns ## COG: ECs0426 COG1680 # Protein_GI_number: 15829680 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 664 86.0 0 MKRCLLSFAALCAVSLSTAQAAQPLTAPVLASDIADRYANLIYYGSGATGMALVVIDGNQ RVFRSFGETRPGNNVRPQLDSVIRVASITKLMTSEMLVKLLDQGVVKLDDPLSKYAPPGA RVPTYQGTPIRLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWNYLSTATLKSAPGSQ AGYSNLAFDLLADALATASGKPYPQLFEEQITRPLGMKDTTYTPSPDQCKRLMVAEKGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQFLSSDFYARSNQADRMQTLIYQRAQLRRVIGMD VPGKADALGMGWVYMAPKDGRPGIIQKTGGGGGFITYMAMIPQSNVGAFVVVTRSPNTRF VNMSDGVNNLVAELSANKAQVLTASN >gi|333596726|gb|GL892086.1| GENE 1495 1566710 - 1567339 249 209 aa, chain - ## HITS:1 COG:no KEGG:ECL_01130 NR:ns ## KEGG: ECL_01130 # Name: not_defined # Def: putative DNA-binding transcriptional regulator # Organism: E.cloacae # Pathway: not_defined # 1 209 1 207 207 313 73.0 3e-84 MNVNAKPLSELSRLITCLEVAGTLFKNDPQQLITTGNNNDDEPSTFVIQSGLVAVHRKSD ELLVGIARAPFIYGLSAWINDSYLEYSLMAQTPCSGFYLPASRACQLIQQQHLWQDAFCW LSWINHILGKRDTQLVGNNSYSQIRAMLINMAEWDDTLRSKIGVMNHIQRSTRISRSVVA EVLAALRQGNYINMSRGKLVSINRLPTDY >gi|333596726|gb|GL892086.1| GENE 1496 1567429 - 1570203 3103 924 aa, chain - ## HITS:1 COG:STM0373_2 KEGG:ns NR:ns ## COG: STM0373_2 COG3468 # Protein_GI_number: 16763753 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 488 924 17 467 467 530 71.0 1e-150 MQTWKKKLVVSQLALACTLAIASQANAKDISGTTYNTFGYDNTASTPWFNGYADWDYSDA RHDGDIYPVVNKSTVNGVISTYYLDDGVNGRANTLSISNSTINGMITSECMTTTCADGTD TDGTRHTQYDRFGLTVDNSTINDTYEHYAYDVVNGETSETHYLDTYGLGNAITLDVESDI VIQNNSHVAGITLTQGYHELDNTPYDGVEGVANNSNIFTDTLVVKDSVLTSGAYSDLGTS GFYGQTAKPSDYGETNATAADDAALIVAASASDNAMQTTATFDHSTITGDILFASTFDNN FYENGDPATDTTNDGVYNPTTNGWDDTDKLDVTLTNGSKWVGAAQSSVEAIGTAQMYGEG YSEVDWHTLSPNSIWPDSTFDSNGHVAGEEVYQSGLFNVALNNGSEWDTRKISNIDALTV NNQSQVNVENSGLLADSITLTNASELNIGDSGGVATDSLYLDSGSRAALTEETAELYANT ITVDNGAELALGLGQVDTHNMVLTDGGVLNVASRDYVLNSDLDNARYITNDRYKTGYDYG VVALNSDGHLAVNGDVAGNYKVRIDDATGAGSVADYKNKEIVRVYDNNAGTAASFTAANK ADLGAYTYQAQQKGDTVVLQQEELTDYANMALSIPSANTNIWNLQQDTVGTRLTNSRHGL ADNGGAWVSYFGGNFDADNGTVSYDQDVSGIMVGLDTQIGGNNAKWIVGGAAGFAKGDIS DRTGQVDQDSQTAMIYASAKFMNDIFLDSSLSYTRFNNDLSATMSNGQYVDGNTTTDAVG FGMKLGYDWKPNLSGYVTPYAAISGLFQSGDDYQLSNDMRIDGQSYDSMRYELGVDAGYT FNYGGEQALTPYFKLAYVYDDADNNADINNDSIDNGVEGSAVRVGLGTQFSFTKNFSAYT DATYLGGGDVDQNWGANLGVKYTW >gi|333596726|gb|GL892086.1| GENE 1497 1570655 - 1571629 1301 324 aa, chain + ## HITS:1 COG:ECs0423 KEGG:ns NR:ns ## COG: ECs0423 COG0113 # Protein_GI_number: 15829677 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Escherichia coli O157:H7 # 1 324 12 335 335 593 93.0 1e-169 MTDLIARPRRLRKSPALRAMFEETTLTLNDLVLPIFVEEEIDDYKAIDAMPGVMRIPEKH LAREIERIANAGIRSVMTFGISHHTDATGSDAWKEDGLVARMSRICKETVPEMIVMSDTC FCEYTSHGHCGVLCDHGVDNDATLLNLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALD AAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPLNRREAIRESLLDEAQG ADCLMVKPAGAYLDILRDIRERSELPLGAYQVSGEYAMIKFAAQAGAIDEEKVILESLGA IKRAGADLIFSYFALDLAEKKILR >gi|333596726|gb|GL892086.1| GENE 1498 1571703 - 1573433 1454 576 aa, chain + ## HITS:1 COG:VC0489 KEGG:ns NR:ns ## COG: VC0489 COG3176 # Protein_GI_number: 15640516 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Vibrio cholerae # 54 562 52 568 586 268 34.0 3e-71 MFSLDSVLDDLWPQARPAPWQKSLLKRLLHEDEFQQFAASHRHLKGLDMVEQVLEHLDIL CSVSARDLEQIPEHGPLIVIANHPTGTLDGLALLYAVSRVRRDVRVVTNRMLSHLEPLSS LFIPVDNMGGRTAKASLMQMEQHLQNAGVLIFFPAGEVSRPTRKGIRDKKWHPGFFKLAS KLRVPLLPVHIQAHNSVLFYASTLVSPTISMLLLMQQMFRRRHSQLPIKIGQQIAWNDRF SATLSSREMAEQCRQHVIRLGKGLPGVFKTQCAIARPEDRATLKRELAQAECLGKTSDGK TIYLWQRNGQEEAPLLRELGRLREIAFRAVEEGSGKRRDTDSYDDDYLHLILWDDDDLEI VGAYRFMPTAMQVEKRGVEGLYSYSLFHYDERMQDILEHGIELGRSFIQPRYWGRRGLDY LWSGIGAYLARYPHYRYLFGPVSISGGLPPAARDLLVAFYRLWFPASHPLAASRQPYPAS LPDVLAQFGGVDYVDDLTKLKTLLGNLGCGIPPLYKQYSELCEPGGVQFIDFGSDPAFNN CVDGLVLVDLCYLKANRYQRYIEAHLTPSPQPSLAS >gi|333596726|gb|GL892086.1| GENE 1499 1573559 - 1574410 1062 283 aa, chain - ## HITS:1 COG:ECs0422 KEGG:ns NR:ns ## COG: ECs0422 COG2175 # Protein_GI_number: 15829676 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Escherichia coli O157:H7 # 1 282 1 282 283 522 90.0 1e-148 MSERLTITPLGPYIGAQVSGLDVTRPLSDNQFEQLYHAVLRHQVVFLREQAITPQQQRAL ALRFGDLHIHPVYPHAEGVEEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKLLP ETGGDTLWASGIAAFEALSAPFRALLSGLRAEHDFKKSFQEYKYRKSEEEHQRWLDAVAK HPPLLHPVVRTHPVTGKQALFVNEGFTTRIVDVAEKESEALLGFLFAHITKPEFQVRWRW QENDLAIWDNRVTQHYANADYLPQRRIMQRATILGDKPYYRAL >gi|333596726|gb|GL892086.1| GENE 1500 1574407 - 1575234 921 275 aa, chain - ## HITS:1 COG:tauC KEGG:ns NR:ns ## COG: tauC COG0600 # Protein_GI_number: 16128352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 275 1 275 275 379 86.0 1e-105 MSIVFSEKTRRTRLALRWPFSRQLTLSVGTLVVLLAVWWAVAAQQWVSPLFLPPPGQVLE KLITIAGPQGFMDATLWQHLGASLTRILVALLAAVIIGVPVGIAMGLSPTVRGILDPLIE LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLG ASRTQVLLFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD VVLAGIAVIAAIAFGLELGLRALQRRLTPWHGEIQ >gi|333596726|gb|GL892086.1| GENE 1501 1575231 - 1575998 264 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 205 1 215 245 106 31 5e-21 MLNITNLSADYGGKPALEAINLTLDSGELLVVLGPSGCGKTTLLNLIAGFVPYQHGTIHL EGKRVTGPGAERGVVFQNEGLLPWRNVQENVAFGLQLAGVAREQRLNTARDMLKKVGLEG AEKRFIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLRLWHETGK QVLLITHDIEEAVFMATELVLLSPGPGRVLERLPLEFARRYVAGEPVRSIKSDPLFIEQR EYVLSRVFEQREAFS >gi|333596726|gb|GL892086.1| GENE 1502 1576009 - 1576971 1294 320 aa, chain - ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 1 320 20 339 339 531 88.0 1e-151 MAISSRITLLGALALWAFQAQAVDVTVAYQTSAEPAKVAQADNTFAKESGAKVDWRKFDS GAAIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASQLGNSEALVVKKTITRPEDL IGKRIAVPFISTTHYSLLAALKHWGIKPGQVQIINLQPPAIIAAWQRGDIDGAYVWAPAV NELEKEGTVLTDSEKVGQWGAPTLDVWVVRKDFAEKHPEVVKAFARSAIDAQQPYISNPD EWLKQPANLEKLSRLSGVPEADVPGLVKGNTYLTPAQQVQQLNGPVSKAIVDTATFLKEQ GKVPAVAADYSQFVTDRFVK >gi|333596726|gb|GL892086.1| GENE 1503 1576992 - 1578047 992 351 aa, chain - ## HITS:1 COG:yagD KEGG:ns NR:ns ## COG: yagD COG2040 # Protein_GI_number: 16128246 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Escherichia coli K12 # 1 307 1 307 310 526 87.0 1e-149 MSQNNPLTALLENQPFIVLDGAMATELEARGCNLADSLWSAKVLMENPELIRDVHLDYYR AGAQVAITASYQATPAGFAARGLDEAQSRALIGKSVELARKAREAYLAENAQAGTLLVAG SVGPYGAYLADGSEYRGDYVRRAEEFTEFHRPRVEALLDAGADLLACETLPSFPEIKALA ALLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVSVLENYPQVVALGINCIALENTTAALT HLHSLTSLPLVVYPNSGEHYDAVSKTWHHHGEACETLAGYLPQWLEAGAKLIGGCCRTTP KDIAELKRSATRRNNRTKPTILSRFFSKNESSLAILFYSFIKLPAPEILPP >gi|333596726|gb|GL892086.1| GENE 1504 1578034 - 1579434 1379 466 aa, chain - ## HITS:1 COG:ykfD KEGG:ns NR:ns ## COG: ykfD COG0833 # Protein_GI_number: 16128245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 466 9 475 475 808 93.0 0 MQTEQQNGQLKRTMKTRHLIMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVW LVMQCLGELSVAMPETGAFHVYAARYLGPATGYTVAWLYWLTWTVALGSSFTAAGFCMQY WFPQVPVWTWCVVFCVVIFGLNVISTRFFAEGEFWFSLVKVITIIAFIILGGAAIFGFIP MQDGSPAPGLSNITAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPHKVIPVA IRTTIARLIIFFIGTVFVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAIL SAANSGLYASGRMLWSLSNEKTLPRCFARVNKNGVPLTALSVSMLGGVLALFSSVVAPDT VFVALSAISGFAVVAVWISICASHFMFRRRHVQAGQPLSALQYRAPWYPLVPVLGFILCL VACVGLWFDPSQRIALYCGLPFVALCYGAYYLTRNLTTQEPEHVAE >gi|333596726|gb|GL892086.1| GENE 1505 1579592 - 1580701 1470 369 aa, chain + ## HITS:1 COG:PA2651 KEGG:ns NR:ns ## COG: PA2651 COG0628 # Protein_GI_number: 15597847 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Pseudomonas aeruginosa # 25 352 25 352 352 313 52.0 3e-85 MRFNGLTKGFFILILALVTWAFFDVLSPYFSAILWAAILTIIFNPVKNKLRTALGDRNGL ASLLTLGIICLIVFIPLMVILSSLAVELNMVYTKLQQNNTQFPEVIAGIFNRLPDWASGF LADHNLTNAAQIQKKLSDVALQGGQYLAGSAFLIGKGTFGFAISFGIMLYLLFFLLKDGP YLVRQILDSLPLSDFVKQHLFAKFVGVSRATVKGTAVVAVVQGTLGGIAFAIVGIDGSVL WGALMAFLSLVPAVGSAIVWVPAAIFLFATHQLWQGLFIVGFFVIIVGLVDNLLRPLLVG KDTKMPDYLILITTLGGMELYGINGFVIGPLIAALFIACWNLFSGRDHAGNAEELDAEFI EEGKNPPDL >gi|333596726|gb|GL892086.1| GENE 1506 1580888 - 1582600 1408 570 aa, chain + ## HITS:1 COG:AGl3494_1 KEGG:ns NR:ns ## COG: AGl3494_1 COG2770 # Protein_GI_number: 15891865 # Func_class: T Signal transduction mechanisms # Function: FOG: HAMP domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 262 26 286 286 138 32.0 4e-32 MLMASHADNVERQAVKQRQIFDQLTEEIEAETWMLSDLARLYAIKKEPDVLKTYQAKEGE LKNIEHKVGQLKDTGATGEELALLYEGLKIVDGLQDEQQAAIGSVARGEEQQAIALLFGK SYELETERAQSKIDHFRLLLDKRIIADVQAATKTSKTLRTLSEVMVGLTALLFLFVMGFI LKHRVLRPVVRLSDVVHRLASQDYAVETPSFSQVDEIGDMAQAIRIFRENGLARQRLEKE RDADWAIRELLARMTQRLQGCENVSDVMNVAELFAPNIAPGVSGHLYILERDPWQMRCAA EWLSPEGEKKPFHPDECWAVRRGQSHPPVNGEPDIGCYHLPESQAQQSLCVPLIAQGEAI GLLSFQNITPETAPSRAYLELMAEALGLALANQRLRDALLEKALFDPLTGLRNRHHLEDT FRTQMKQAMRNDEPVSCLMIDIDHFKSINDRFGHEAGDLVIKSVATIIQRAVHDTGLAFR YGGEEFLVLLTGADEEAALAAATEIYNGVHALSLRYGLSEIGPVDVSTGIASYPQHAQSD NLLRAADVALYRAKELGRARIVSFGRLEAG >gi|333596726|gb|GL892086.1| GENE 1507 1582623 - 1583132 382 169 aa, chain - ## HITS:1 COG:no KEGG:ECL_01095 NR:ns ## KEGG: ECL_01095 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 166 1 166 169 213 68.0 3e-54 MKKDSYAFLIPLIVGGLALIFGFVVWSIEIYRVTFLTVRGEQYLAVGTLLLPLVAMVILI AKRAFKDKAIVDVVKLYLGLIIFSLPVAIFVIFTAAWLLGGEYSAWSQPYRYESGSRKSC SGAGVYEPELKREIRICYPQGNYFIDGTLYVEKRSNSLGMVVLWAVALP >gi|333596726|gb|GL892086.1| GENE 1508 1583148 - 1584047 670 299 aa, chain - ## HITS:1 COG:SMa1966 KEGG:ns NR:ns ## COG: SMa1966 COG0583 # Protein_GI_number: 16263531 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 1 299 52 351 369 398 70.0 1e-111 MSRKFDYLGDVEVFITVVEHGSFTAAAVVLSTTPSVLSRAVSRLEARLGRQLLQRTTRRV GLTEAGRIYLEQARSAFSLLDDAERDGRGQGGDLTGRVKISVPTTYGHYRLPPLLARFSQ QHPRVQVELNITNRNVDLIAEGFDLAIRLGQMPDSGLVARKLEEAALLLVASPAYLHRMG VPQTLDELQQHSCLPFIMPRTGRIAPWVFRDDGRDVDWLPRSTFEISDDVLGVVSLAEQG MGICQSYEFIVRDRIERGQLVEVLPHLRGRSRPFSVIFAPHRRQSAATRAMISLLTADA >gi|333596726|gb|GL892086.1| GENE 1509 1584146 - 1584940 546 264 aa, chain + ## HITS:1 COG:RSc3138 KEGG:ns NR:ns ## COG: RSc3138 COG1028 # Protein_GI_number: 17547857 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 262 1 260 262 242 52.0 5e-64 MDLQLSGKTALVTGATAGIGLAIARTLAREGVAVTITGREKAKLQNAVAEISNAAPGVPV SAVIADLGSAEGAEALFAACPDTDILINNLGFYEAKPFADITDEEWLRMIDINVMSGVRL SRHYFPRMLERNWGRVIFMSSEVGAFTPPDMVHYGVSKSAQLAVSRGMAELTKGTAVTVN SVLPSATRSDGIIDYLRQTAPEPGMTDRAIEAHFFETYRPSSLIARMIEADEIAAMVALL ASPLGAASNGAAVRVEGGTFRSIL >gi|333596726|gb|GL892086.1| GENE 1510 1584965 - 1586167 729 400 aa, chain + ## HITS:1 COG:DR1790 KEGG:ns NR:ns ## COG: DR1790 COG3386 # Protein_GI_number: 15806791 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Deinococcus radiodurans # 62 360 51 345 388 123 30.0 5e-28 MSNRSLSAIAMVVLLSFTSAASADNGAMPERWRSYAGVSWDHPDRTAIPATFSGSVNAPI AGIHFDAKGTAYVSTPRLISASAPATLSVLDTTVASGPARLTAFPSREGNAVDGPFGQSL RNVLGFYIDRRNGWLWALDMGFVAGEAESPAGSQKLVVLDLNSGRTIKRISLDSVADRKA SFLNDVAVDERRRIAYISDSGSRSAPDNRAGLIIVDFTSGQTRRVLDRHPAVRVEPGVKV VAHGHEVWPGKPLLIGINGIALSPDAGTLYWTVTTGTHAYALPTAILRQPGSTDAQIASR IEDLGDVGGNTDGIVTDAKGNLYITDVTRNGIVRYDPVSKAMSPIASNEGIYWPDTPTIH PDGDLVFTSSRLSDHFTGAVKAGDERYDLWRLPAKALTPE >gi|333596726|gb|GL892086.1| GENE 1511 1586598 - 1586861 203 87 aa, chain + ## HITS:1 COG:AGl2662 KEGG:ns NR:ns ## COG: AGl2662 COG3915 # Protein_GI_number: 15891441 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 87 82 168 168 122 59.0 2e-28 MRKLMEYVGAKGSVLNVVALNDYTTVIPLSDFQKYNAILALKVNGEYMRIRDKGPSFIVY PYDSLPELNNQIYYSRSAWQVSKMKIE >gi|333596726|gb|GL892086.1| GENE 1512 1586879 - 1588816 1122 645 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 227 639 343 756 776 292 38.0 2e-78 MNRILVGIIFSLFITTGYIAFLVYDRQQELQKLTHYTESWSVAQLVSEYYRFESWIGLYA TDTDDVTVDQVRMRLEIMLSQNDLLKEGGLGRYIDSEKAHQALAVRLENILTYLDGHLEQ MSRSELKLYLKSMHLLDAPLSQLSSTALTKDVNTINETNQKIQVLYYIYSALSLLLVILS FILGFLIIYQNKNILKAHTQVKTLAEELQLSKETLQIQNSKLEYDVYHDSLTGMKNRLFF WDDLNKLNQQAEKNHVSVTVMLFDLDRFKEVNDTYGHDAGDLLLREVSTRLNALSRFSET FYRLGGDEFAFLSNGLTETAAVSRAREISDSISKPYTINNQLIKIATCVGIVLSDNERRS DYLYKFADLALYEAKKEGSQQIKVFRQRMLQKLQESRTLENDMARAIENNEFVVYYQPIV NSVSKEIYGYEALIRWMHPVKGMLSPDSFIFAAEKTGMINEIGKTVLKLACREAVSWAVP ARISVNVSPVQLGSKSFISTVQSILAETGLPANRLELEVTESSLFSDRNNPITILKKLRS LGVRISIDDFGTGYSSLSRLSELNFDKIKIDKSFVSPISTQEDALNIVKLITGMAKSLNM GVIAEGVETEEQLERLQALGCELVQGYLFSKPQPQVDSKIKSGQR >gi|333596726|gb|GL892086.1| GENE 1513 1589076 - 1589333 310 85 aa, chain + ## HITS:1 COG:STM4501 KEGG:ns NR:ns ## COG: STM4501 COG3811 # Protein_GI_number: 16767745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 85 1 85 85 136 95.0 1e-32 MNLSRQEQRTLHVLAKGGRIVHVRDTSGRVTAVECYTREGLLLADCTLAVFKKLKTKKLI KSVNGQPYRINTTGLNNVRAQPDNR >gi|333596726|gb|GL892086.1| GENE 1514 1589344 - 1590090 682 248 aa, chain + ## HITS:1 COG:yjhP KEGG:ns NR:ns ## COG: yjhP COG0500 # Protein_GI_number: 16132127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 248 1 248 248 444 86.0 1e-125 MDIPRIFTISESEHRIHNPFTPEKYATLGRVLRMKPGARILDLGSGSGEMLCTWARDYGI TGTGIDMSQLFTAHATLRAEELGVSERVHFIHNDAAGYVADEEYDVAACVGATWIAGGVA GTTELLAKSLKPGGVMLIGEPYWRQVPASEEIAQACGVSSIADFLTLPGLVASFDQQGYD LVEMVLADQEGWDRYEAAKWMTMRRWLEENPDDDFAKEVRAELTIAPERHVTYTREYFGW GVFALMAR >gi|333596726|gb|GL892086.1| GENE 1515 1590532 - 1591209 211 225 aa, chain - ## HITS:1 COG:no KEGG:Sputw3181_2399 NR:ns ## KEGG: Sputw3181_2399 # Name: not_defined # Def: RNA-directed DNA polymerase (reverse transcriptase) # Organism: Shewanella_W3-18-1 # Pathway: not_defined # 1 224 365 586 586 157 37.0 5e-37 MFYGNKKPTILTEGKTDNVYLKAAIHKLAALFPKLAIEKTALAPYKLLTQFVEYNERTKY LLELFGGTDYLKDFVIHYRHYFHDYKAPKPSNPVIIFVDNDSGPKNLINYVNGVEGIQIF PAGVADIRQSDFVHIFCNLYLVLTPQVEGCPETDIEYFFSNVDRLKQHKGKCFNTVADRD PSNDLSKEAFATHIVNAHKNDIDFSRFTSLLERLEKVIDHYNLIK >gi|333596726|gb|GL892086.1| GENE 1516 1593102 - 1593593 238 163 aa, chain - ## HITS:1 COG:no KEGG:Dda3937_02201 NR:ns ## KEGG: Dda3937_02201 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_3937 # Pathway: not_defined # 1 163 1 173 173 132 44.0 7e-30 MLLSKSAYARHMGVSRQTVYGWIARGEIVISGDKVDVDASQAKQNSAGAGEHQTEMTWAQ AAAWVWKHDSGKKLPADIDAGQRIEAAAAELGFDVQHEPEEQLLILFRLDEETHSFYGKD RAAGALRFLRSELAYVATMHPDTLDDWNKTGLMSLCLLDGEKL >gi|333596726|gb|GL892086.1| GENE 1517 1593628 - 1594332 475 234 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAALFRGMAGELTSLRTTAQQAEAEADLLDVIRNDPDLNEQAKNRRAGEARNPDTLKDFT RGVAAVSEQAANILDYLKNKLAPVNPLASDDVQGFMRDSEMRQTFARLDRRSQEKMLLSM HSGKHPDLADALLRAHAVCSGLDTEQLKRLGFSRIASENGQVISAVAELVDAVRKDVAQI TAVRTWYNNLVYGKNDDPSEVLPRMTGLDQLSEHVSAMLKGSQRQTHSEEKQAA >gi|333596726|gb|GL892086.1| GENE 1518 1594410 - 1594607 131 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVAITGGIMSKVNVKPVLLNGEQIQALKTIQERERQKSGMGIAPSIHAVARKVFDAGLSK MEAGQ >gi|333596726|gb|GL892086.1| GENE 1519 1594650 - 1594916 152 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYTLFSGIHRVYMVFILSLIIWWFIEQNDVYRVHLKSQNVGWYSWVNVLFYKKYIAFMNT MYTLRANSLKRIHTFRVVHPCNFINIVS >gi|333596726|gb|GL892086.1| GENE 1520 1594995 - 1596758 1459 587 aa, chain - ## HITS:1 COG:YPO0880_2 KEGG:ns NR:ns ## COG: YPO0880_2 COG3378 # Protein_GI_number: 16121187 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Yersinia pestis # 184 577 1 395 409 491 60.0 1e-138 MKNAPNLKKQPADLMEESIIFAGADAWTFAKAWQEMNPIGDTVPPVVLDKKQLAELENIR IVDDGRLYARVCRGGHLTERQITILATKLAVAGVERAQFYSEGYQLLEDWTPQLPRLKAD AEAGKSMVIGKPLTDVNLRDLADNEKALILAARYTGIAINENSEGVYVYRAGIWEKTSLL ELSREMVAIYNENKTNFSKRAINNVIDALKIVIPVMGEPRRSLIPFANGVYDMETGVFSE HSQDNWLTNHNGVTYMPAVPGENLRDHAPNFHKWLSYASDRDAIKMQRIAAALFMVLANR YDWQLFLEITGEGGSGKSVFTHIATMLAGAHNTASGNMAALDSARGRAQFVGKSMITLPD QPKYSGEGTGIKAITGGDAVEIDPKHEHQYTAVLRAVVVATNNTPMIFTERAGGVSRRRV IFQFNRRVSEEDKDPDLAEKISAEIPVVVRRLLANFADPEKARALLLEQRNSEEALEVKQ KTDPLYAFCAHLERLADCAGMMVGNRNPPHYPRIYLYHAYLAFLEANGFDKPLTLNKFAE GMESAMREFNHEYRKERRARGMVTNVELSESAEDWLPQTHPVAGHKE >gi|333596726|gb|GL892086.1| GENE 1521 1597080 - 1597283 221 67 aa, chain - ## HITS:1 COG:no KEGG:CKO_01888 NR:ns ## KEGG: CKO_01888 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 5 66 14 75 82 77 56.0 1e-13 MTPVYDLVRRADGKNVFSFPAGGRYLVDTSNGLQSMRPLLDDEIIFTVESAARFLRKIGY QVIPPAA >gi|333596726|gb|GL892086.1| GENE 1522 1597399 - 1598274 963 291 aa, chain - ## HITS:1 COG:no KEGG:KPK_A0175 NR:ns ## KEGG: KPK_A0175 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 168 1 168 170 276 83.0 5e-73 MFKLQTLTAKARELRGNVVKATTTKGTRTMTPVYEREEQRKLRERIQQTQPDWVLLWWDI ATVTGWRTSDVCNFRYSCINWETGIATIIVAKQTKAAEARATRKGLEIVRQQRKDAARLA GDHIAYMHWDSVNCDELAAGMTEEEQAIVFELVAKAEVKHDTKQLPPGIIKRLRERMERN LIGDDLVFSRSQIESNRCQSLEGSVSRQTIWKKLHNVMVWFTRVVNTRLRLSAYSSRKIA AFNLMSAGGEQGLLVASEMLGHSNPAITRTYLQLGSKASAIQSRLAMEVSV >gi|333596726|gb|GL892086.1| GENE 1523 1598267 - 1598455 66 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MACTKSTQTRPEFTWRFLTLGEFTNQIVNVTASTEHEAREKTPAGCVCILACRFRLKEVQ HV >gi|333596726|gb|GL892086.1| GENE 1524 1599114 - 1599722 327 202 aa, chain - ## HITS:1 COG:Z1818_1 KEGG:ns NR:ns ## COG: Z1818_1 COG3617 # Protein_GI_number: 15801289 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Escherichia coli O157:H7 EDL933 # 18 129 7 118 188 118 49.0 8e-27 MTIKNARAGQGFAHPENSSDDISVIKFEDAKVRIVKILGEPWFVAADVCAALEITDHKVA LRRLDDDEKGECLIPTPGGKQTMRTVCESGFYKLISRSRKATTPGTFAHQFSNWVFREVI PSIRKTGFYGVPFVFLNDFSRRMAAYQQEASKRGYKLQQCKAVKEALVREESQLWRKYQP ELLGEDGHEPFTEVRPLTDEKN >gi|333596726|gb|GL892086.1| GENE 1525 1599744 - 1599956 67 70 aa, chain - ## HITS:1 COG:ECs3513 KEGG:ns NR:ns ## COG: ECs3513 COG3311 # Protein_GI_number: 15832767 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 5 58 8 61 68 77 66.0 5e-15 MSYSLIRFAEVQKRSGYSKAWIYRLLKENRFPQSVKIGARSIAFVESEIDEWISQRIEER DALISTKPQL >gi|333596726|gb|GL892086.1| GENE 1526 1600166 - 1600849 276 227 aa, chain - ## HITS:1 COG:no KEGG:YpsIP31758_0894 NR:ns ## KEGG: YpsIP31758_0894 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 1 226 1 224 226 196 46.0 8e-49 MNSFDFIGFNRSEIEKTLGLNLHDNLLEYNIGLKKNLPSWLVPYLSRDSISLSDSARLIV GANPRENITGEKSHEYEAYKESLWDAIDNSKLTARDISHYDNMDHDRRDCILVRSEVEKW VTEHNFNWPLPLQQPTVNEQTNQVYLDQWGEFPGKNTALMMIAGMAIALEKSSKSYRNGE RLNKLAIARAVAQNLATLGYQGMVVTEKQMTNLIKEALEVTFPESDG >gi|333596726|gb|GL892086.1| GENE 1527 1601372 - 1602586 408 404 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 36 389 44 403 406 161 28 9e-38 MKLNARQVDAAKPKDKPYKLADGGGLYLLIKPNGGKYWRLKYRVAGKEKLLALGVYPEVT LADARSKREEAKRGIAGGIDPMEAKREEKIAREIQLNNTFKDLALEWHSSKLKKWSAGYA SDILEAFNKDVFPYIGKKPIADIKPLELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIV TGRAEYNPAPDLTSAMQGHESNHYPFLTPKELPDFFKALSGYTGSALVVLAARLLIITGL RTGELRGAFWDEIKISKAVWEIPASRMKMRRPHVVPLSRQALSLIGQLQELTGNYPLMFP GRNDPRKTMSEASINQVFKRIGYDGKVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDRN SIRGTYNHAQYIDGRREMLQWYADYMEALENGENVVHGTFGKSA >gi|333596726|gb|GL892086.1| GENE 1528 1603881 - 1604291 150 136 aa, chain + ## HITS:1 COG:intF KEGG:ns NR:ns ## COG: intF COG0582 # Protein_GI_number: 16128266 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 136 325 460 466 247 91.0 4e-66 MRIKDKIEGERIIPLTPYVSELLSALAQFPNSDVNKEGWVFRSNSKSGKIIEPRSGHNRA LARAELPHISLHGLRRSFGTLAEWVEVPTGIVAQIMGHKPSALAEKHYRRRPLDLLRKWH EKIERWILQQANIVKK >gi|333596726|gb|GL892086.1| GENE 1529 1605217 - 1605981 139 254 aa, chain + ## HITS:1 COG:no KEGG:JW0273 NR:ns ## KEGG: JW0273 # Name: yagM # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 2 249 37 281 284 130 31.0 5e-29 MKKRITFSANKKSTIDAIDDYSNAKGYSRSEVISFLLNATAPALNKITSQYHIAQTLEST LGCIFEEKAPSIARGEPKLTYEEFFYSVWNTHIRHRNEVVDQDFYAHKIPHDKMGKSEKK LIHEKLSYIIKSFNVKKAIFIYTDRRVNRKHLIAGGLSNIILIKDTVYDGCFFDLSSIVI MPIFELITFGVEAVLKRNKTPPKQSCYCWIPIYYTNDLAVMVPVIAEGDTPQKAMKGGDA IIINPFNGEVNHTF >gi|333596726|gb|GL892086.1| GENE 1530 1606444 - 1607064 246 206 aa, chain + ## HITS:1 COG:no KEGG:JW0271 NR:ns ## KEGG: JW0271 # Name: yagK # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 205 1 205 208 258 56.0 1e-67 MELYHGSHGEHVLAYKKNIERVVNDALSEFPRTMALRVDVHYPPILDRGDTVCCFPNLEP GAISRFRNALNAMLEANERARAANGKRIYPNRVRHVWVREFSEEGKCHFHIGLFFNKDAY YHLGDYEAESNLRMMIVRAWYSALGLELDDYPGLVHYPENCRYILDVNDFNFEGEYNKLL NRLDYLAKLDTKVYGDGDRSFGCSRW >gi|333596726|gb|GL892086.1| GENE 1531 1607138 - 1607632 114 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|125659368|dbj|BAF46885.1| ## NR: gi|125659368|dbj|BAF46885.1| hypothetical protein [Escherichia coli] # 67 164 1 98 98 188 100.0 1e-46 MSVTVTVEKVGAAFALIKCHHRPEAEYEFTGEFLGLSHELKFAGKNLRELRETGCSIYGI YQDEYGMTLLPDHPGIKLAEILAVSNIGLNKFSVYMGCREQEIVELLNGSVSLTKAMALR LSHVVGGSWSKWMLIQEQFELQLAQREIKELMILTNIGDEVVGL >gi|333596726|gb|GL892086.1| GENE 1532 1607667 - 1610798 3477 1043 aa, chain - ## HITS:1 COG:PM1541 KEGG:ns NR:ns ## COG: PM1541 COG0610 # Protein_GI_number: 15603406 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Pasteurella multocida # 1 1042 1 1050 1057 1302 61.0 0 MLSEDDLEQQCLKWFAEQDWEVLHGPDLAPDGDNPLRASFHDVFLRPVMLEQLQTINPHL PVSVLEEVILRITRPESPDLVVSNKAFHHLLLDGVPVEYKREDKTVHDKALLMDFNHPGN NRFMVVNQVAIQGIKQVRRPDIICYINGLPVAVIELKSPIDANADIWAAFNQLQTYKNEL SDLFICNEALVVSDGQNARIGSLTADEERFLPWKTVANEDDKPQFHWQLKTVVQGFFNSE LLLDYIRFFVLFENDGKRLIKKIAAYHQFHAVREAVAATIVASTGKHLPLRSNITPGSKK AGVVWHTQGSGKSISMCCYAGKLLQQTEMNNPTIVVVTDRNDLDGQLYATFCQAHDLLKQ TPLQANDRDELRELLNARESGGIIFTTVQKFAPLDSEQSHPALNVRSNIVVISDEAHRSQ YGLSATLDRQTGAYKYGYAKHMRDALPNASFMGFTGTPIASEDKDTRAVFGDYVSIYDIQ DAVDDGATVPIYYESRLAKLDLNHEELETLSDQVDELVEDEETGQQEKTKGDWSRLEKLV GSEPRIKQVAADLVQHFETRNAAMNGKAMIVAMSRDICVKLYNAITEIRPDWHSTDVEQG AIKVIMTGSASDKDHLQPHIYNKQTKKRLETRFKDLNDPLKLVIVRDMWLTGFDAPCCHT MYIDKPMRGHNLMQAIARVNRVFRDKPGGLVVDYIGIANELKQALKTYTDSKGKGQSTVD AREAFAILLEKIDIIHGMFAPSAGKPGFSYAGFSRDPLAFLRDAVNYILGLDDGKKRYLD VSLAMNKAWSLCNTLDEAKPLQEEFAFLSAVRVGLIKLDPKAKFSQSEKNSLLSKILDNA VVATGVEDVFALAGLDKPNIGLLSDEFLEEVREMPQRNLAVELLEKLLNDGIHARSGNNV VQQKKYSDRLKAVLLKYNNRAIETAQVIEELIQMAKAFQEAMARDDALGLTPDEIAFYDA LAENESAVRELGDDTLRKLAIEVTLKLRQSTTVDWQVRESVRARLRILVRQTLRKYKYPP DKTPGAVELILKQAEVVSNSWTV >gi|333596726|gb|GL892086.1| GENE 1533 1610798 - 1611973 1468 391 aa, chain - ## HITS:1 COG:no KEGG:ESA_00616 NR:ns ## KEGG: ESA_00616 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 381 1 379 395 525 68.0 1e-147 MYKVDTPTNSLHSLQEVSFSSLGFRERDHLQEWLAKNPQALTRDNDDELLIIQKEFAGFD DTKERLDLLALDKKGNLVIIENKLDDSGRDVVWQALKYAGYCANLRQESVVEIFQLYLDQ YEPNENRQAAEVIAEFMGWESLKEGVLNRKGTQRVIMVAANFRKEVTNTALWLMQFGIRA QCFKVTPYRFGEDVFVDIRQVIPTPEAESYMIGMAQKEAEEQSTSSSSELQQRHYLRREF WTMALEKFRTSPCSLFNNRAPSTDHWLAAGSGVSGVPFELIFSQKDARVQLNISRGDALE NTWLFERLQERKTHIESLFGEPLDWRLLPERKSCQIVCSKTFDGGNKEIWPVIIDWMMDS MNRLEKAIRPSLLELAIELKQTGMITEGEEE >gi|333596726|gb|GL892086.1| GENE 1534 1611966 - 1612766 146 266 aa, chain - ## HITS:1 COG:PM1538 KEGG:ns NR:ns ## COG: PM1538 COG0732 # Protein_GI_number: 15603403 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Pasteurella multocida # 1 92 159 250 435 101 52.0 1e-21 MAQALFKSWFVNFEPVKAKMAVLEAGGSQEDAMLAAMTAISGKDDDALVVFEREHPEQYA ELKATAELFPSAMQDSELGNIPVTWELGKLQDLLVLQRGFDLPSSARKDGEFPLIAASGP NGTHNVAMAKAPGVITGRSGVLGKVYLTLEDYWPLNTTLWVKEFKRATPCYAYELLRLLD MKAFNAGSAVPSLNRNHIHSLSYPLPPMALVNLFESSALLLHQRAHVNLKHSQSLALLRD TLLPKLLSGEITLPEAEQAVSEAENV >gi|333596726|gb|GL892086.1| GENE 1535 1613263 - 1614972 2178 569 aa, chain - ## HITS:1 COG:PM1537 KEGG:ns NR:ns ## COG: PM1537 COG0286 # Protein_GI_number: 15603402 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Pasteurella multocida # 1 568 1 568 568 803 68.0 0 MNNAEQQFLNELDNKFWKAADKLRANMDAANYKHVVLGLIFLKYVSDAFEARQQELITLF RDVGNPDNIYAMSRDGYDSDEEYAQAIVDELEVEDYYTEKNIFWVPKAARWDTLKNKAML PTGTVLWVDETTGKDVTLRSVSWLVDNALDEIEKTNPKLKGILNRISQYQLGNEVLTGLI NTFSDANFSNPEYNGKKLNLKSKDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVE MLQPYNGRVYDPAMGSGGFFVSSDRFIEEHAGEKQYNAAEQKRNISVYGQESNPTTWKLA AMNMAIRGIDFNFGSKNADTLLDDQHPDLRADFVIANPPFNMKEWWNAKLENDVRWKYGT PPQGNANFAWMQHMIHHLAPKGSMALLLANGSMSSNTNNEGEIRRNLIKADLVECMVALP GQLFTNTQISACIWFLTKDKSSGNGKAHRKGEVLFIDARKIGFMKDRVLRDFTREDIARI ADTFHKWQADKEYEDEAGFCFSATLEDIQKNDFVLTPGRYVGATEQDEDDEPFAEKMARL TTQLKDQLEESANLEAQIKANLGGLGYEF >gi|333596726|gb|GL892086.1| GENE 1536 1616725 - 1617000 223 91 aa, chain + ## HITS:1 COG:perR KEGG:ns NR:ns ## COG: perR COG0583 # Protein_GI_number: 16128239 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 91 207 297 297 190 98.0 5e-49 MTPPNNYGLRFDRSFLAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGH YLVFPQHQHMHSALDVFKTWLLNELNLGKIR >gi|333596726|gb|GL892086.1| GENE 1537 1617329 - 1618192 523 287 aa, chain + ## HITS:1 COG:ykfA KEGG:ns NR:ns ## COG: ykfA COG3596 # Protein_GI_number: 16128238 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 287 2 288 288 581 100.0 1e-166 MNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGD ISPVSDVAACTREPLRFRLQVGDRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLW LIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAEPTSGGGQLSTAQKQNISRKIC LLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPREATSPVVSQLHPSFRTTVVREQAR SDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVVSVARAVWDFFF >gi|333596726|gb|GL892086.1| GENE 1538 1618284 - 1618625 340 113 aa, chain + ## HITS:1 COG:no KEGG:JW0242 NR:ns ## KEGG: JW0242 # Name: yafZ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 110 1 110 273 213 100.0 2e-54 MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQRE GFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTLAS >gi|333596726|gb|GL892086.1| GENE 1539 1622097 - 1622318 130 73 aa, chain + ## HITS:1 COG:no KEGG:JW5956 NR:ns ## KEGG: JW5956 # Name: ykfH # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 73 1 73 73 146 100.0 3e-34 MKIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVPDIAGVLAVYAERRQDR NGPYTCLMSITLN >gi|333596726|gb|GL892086.1| GENE 1540 1622337 - 1622654 369 105 aa, chain + ## HITS:1 COG:no KEGG:JW0235 NR:ns ## KEGG: JW0235 # Name: yafW # Def: antitoxin of the YkfI-YafW toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 105 1 105 105 209 99.0 2e-53 MSNPTRGLQREITLRLGARLVQEGNRLHYLADRASITGKFSDIECRKLDETFPHFIRQME SMLTTGELSPHHAHCVTLYHNDLTCEADTLGSCGYVYIAIYPTQR >gi|333596726|gb|GL892086.1| GENE 1541 1622675 - 1623004 235 109 aa, chain + ## HITS:1 COG:no KEGG:JW0234 NR:ns ## KEGG: JW0234 # Name: ykfI # Def: toxin of the YkfI-YafW toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 105 1 105 113 197 90.0 1e-49 MKTLPATTQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFCNEAVIKEHIDAGITLA DAVNFLVEKYELVRIDRKGFSWQEQTPYISVVDILRARRSTDLLKTNVK >gi|333596726|gb|GL892086.1| GENE 1542 1623355 - 1624212 797 285 aa, chain - ## HITS:1 COG:BMEII0436 KEGG:ns NR:ns ## COG: BMEII0436 COG1349 # Protein_GI_number: 17988781 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Brucella melitensis # 18 276 10 268 282 329 64.0 5e-90 MAQTPQDPSLNLFMADTLPSDSRQARQLARRQLIVEAVMAEGAIRIEDITERFDISLMTA HRDIDELVERGLLHKSRGVVSATATSLVESSDIYRATRQLEEKQAIAEVAAGYLEPGQAI FLDDSTTVFQIARFLPARAPLTVITNSLTLMNELRNIRDITLLGLGGQYYNWCNAFMGHS TRQEIAGLRADVFFVSMSAVMDGIVFHQSAETIETKRAMFDSAKQRILMMDHTKFERRAL YHFAHLNEFDAVIVDRGIPVPTLRQIMDMGGNVVVADMKGKAGER >gi|333596726|gb|GL892086.1| GENE 1543 1624343 - 1625293 1437 316 aa, chain - ## HITS:1 COG:BMEII0435 KEGG:ns NR:ns ## COG: BMEII0435 COG1879 # Protein_GI_number: 17988780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Brucella melitensis # 40 314 16 290 292 388 75.0 1e-108 MYLNSKRFILAAATVALTAIATPTWADGLMTIIVNDPSNPYWLTEGQVAQKTAEKLGYTA KVSAHKGDTNTESQLIDTAITNKSKAIILDPANADGSVGSVKKAIAANIPVFIINAELNQ SGLAKAQLVSNNAQGAALGAQQWVQQVGDAGDYVELKGPPSDNNAATRANGFETVLSQYP DLKKTGSEVANWDRTQGYNKMQSLLQANPNVKGVISGNDEMALGAIAALKEAGKLKQVTV GGFDGSPDAVDAVKEGTLAYTVMQPVATFAAKAVEQADTFLKTGKTGASSEKQLFDCVLI TKENAAKITSPFMLAD >gi|333596726|gb|GL892086.1| GENE 1544 1625382 - 1626443 1464 353 aa, chain - ## HITS:1 COG:BMEII0433 KEGG:ns NR:ns ## COG: BMEII0433 COG1172 # Protein_GI_number: 17988778 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Brucella melitensis # 19 350 14 345 346 431 78.0 1e-120 MTDRTQQLAVPARAVKSRTGTTKSMSLARILLEGRAFFALLVIIAVFSLMSPNYFSGANF LTMASHVAIFGLPAIGMLLVILNGGIDLSVGSTLGLAGVCAGYMMQGINLEALGVVLYLP VWAVAILTLAVGALVGLVNGVLIAWCRVPAFVATLGSLYVARGIALLMTNGLTYNKLSGS DALGNTGFDWLGFNRIFNVPVGVLILGVTALICGYLLSRTAFGRWLYASGGNERAAELSG VPVKRVKISVYVLSGICAAMAGLVLSSQLTSAGPTAGTTYELTAIAAVVIGGAALTGGRG NVRGTLLGAFVIGFLSDGLVIIGVSAYWQTVFTGAVIVLAVLLNTLQYGRSRR >gi|333596726|gb|GL892086.1| GENE 1545 1626467 - 1628005 179 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 284 489 16 217 245 73 28 3e-11 MKQREFHSALTRGEIILSAKNVSKVYGSTHALKGVNFDIRRGEVTTLFGENGAGKSTLMK ILSGVITPSSGEILLNGEVKVFNSATDARNQGISIIHQELNLAPNMNVRDNIFIGREIMT SSGVDFAEETRVTRHLMKSLEEDIDPLTPVENLRLGQQQIVEIARALSVNSQILIMDEPT SALSAAEVEVLFQVIRDLTSQGVAIVYISHHLEEALEITDRAVVLRDGVMTAYARRDEID LDWIVRNMVGESFDLGAPPSGYDFGDTALSVKSLTVKGKAGIRLVDNLSLDVRAGEIVCI YGLMGAGRTELMECVAGRLRQSSGEIHIEESDVSGLSIAERIASGLALVPEDRQRDGLVQ TMTVGENLTLASIGRFVRGLTLSTRKEKALITESIRNVTVKTAGGEAAIGSLSGGNQQKV VIGKMLATHPKVILLDEPSRGIDIGAKAEVFRLLAENARQGLAVIYSTSEVGECLSIAHR IVVMSKGRISAVFDSSVSKERIMAASGESLVA >gi|333596726|gb|GL892086.1| GENE 1546 1628002 - 1628655 740 217 aa, chain - ## HITS:1 COG:BMEII0431 KEGG:ns NR:ns ## COG: BMEII0431 COG5618 # Protein_GI_number: 17988776 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Brucella melitensis # 98 217 2 121 121 129 57.0 3e-30 MSGVSALSTLHSCRRMRRYLLCGLAAAAVVAAMAIDTKVVKIGSGQDAQEQGFSASTYGE KTFPGIKSYVESHAVEAVELANALKVNQLEAVKKYATGTTLPVLPVRFSGTVGEGKSGIF ALHVEGLPEGMKARLQTGPVLTGTELRDVTGKIQFGDFTNQIEYQNAGSAINQALKASLL DKLDRTALSGKLVEGVGVFRLLTPNNWLVTPVSLEVK >gi|333596726|gb|GL892086.1| GENE 1547 1629088 - 1630653 1488 521 aa, chain + ## HITS:1 COG:BMEII0430 KEGG:ns NR:ns ## COG: BMEII0430 COG1070 # Protein_GI_number: 17988775 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Brucella melitensis # 5 514 9 516 520 594 64.0 1e-169 MDNRDIILGLDSGTSVVKAVAFDLEGQQLGCASARNRYSRSEGHGAALQSMSQTWQDAVA AIRKLAERVDNLAARVVAIAVTAQGDGTWLVGAGNRPVSDAWIWLDARAARTVESLSRSP LSRMRFEATGTGLNTCQQSAQMAHMDRYHPELLNGSEVALHCKDWLYLNLTGVRATDPSE ASFTFGNFRTRRYDDNVIAALGLEHRRHLLPDIVDGVETTHPLTAEAAALTGLRAGTPVS LGYVDMVMTALGAGVHTGEANTACSVVGSTGVHLRAVPTESVWLNDEQTGYVIPLPWPGY VTQVQTNMASTLNLDWLLHVASDLLNSFGCEVDHARLVQHIDRWLSEAKPGALLYHPYIS EAGERGPFVNAEARASFVGLSYRHGFGDMVRAVIEGIGFAARDCYQAMGGAMPAELRLTG GAIRSPQLRQILSACVGVPVRSNSREETGAAGAAMMAAVAIGAYPSMARCVETWVKPLLD TPEAPPPELVARYQHLFGTYQHLRSELPSVWHTLHQPDAGL >gi|333596726|gb|GL892086.1| GENE 1548 1630674 - 1632197 1982 507 aa, chain + ## HITS:1 COG:BMEII0429 KEGG:ns NR:ns ## COG: BMEII0429 COG0578 # Protein_GI_number: 17988774 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Brucella melitensis # 7 496 8 497 502 744 71.0 0 MSKKIVDLFIIGGGINGAGIARDATGRGLSVMMCEKDDLAEGTSSRSGKLVHGGLRYLEY YEFRLVREALIEREILLNAAPHIIWPMRFVLPHNPSDRPAWFIRLGLFLYDHLGGRKKLP GTRTLDLLRDPEGAPILDSFHKGFEYSDCWVDDARLVTLNAVDAAERGATILTRTRCVAA ERKAGAWEITLQNTQTGEQHRVRAKALVNASGPWVLDIINDVTRSHSKRSVRLVKGSHLI VPKFWEGQQAYLMQNHDKRVIFINPYEGDKALIGTTDIPWEGDADSVEADNREQQYLIDA VNRYFKVKLTAADVITRFSGVRPLFDDGKGNPSAVTRDYVFELDDQQQLPLLHVFGGKIT TFRKLAEHALQKLGPFFPQMGADWTRSAPLPGGEIPGADFESYLQTLKEQYAWLPTPLRK HYARLYGARLPQVLGGAKQVADLGRHFGGLLYEVEVRYLVEKEWAQQPEDVLWRRTKHRL HLSDAQQQAFSDWFTDTFTVQPCAQAS >gi|333596726|gb|GL892086.1| GENE 1549 1632208 - 1633140 1024 310 aa, chain + ## HITS:1 COG:no KEGG:EFER_0336 NR:ns ## KEGG: EFER_0336 # Name: eryC # Def: D-erythrulose-phosphate dehydrogenase # Organism: E.fergusonii # Pathway: not_defined # 1 310 61 370 370 548 83.0 1e-155 MALTLSLNTNPLVNRFAEPEELIQTIAQRIRIRDVQLTHEFINPGWPAATINQMTRRMKK ALQETGVRVTSGMTGPYGRLNHFGHPDASVRRYYIDWFKTFADITAELGGDSVGSQFAIF TLRDYQDLARRDALIAIAIECWAEVAEHAKSAGLKYLFWEPMSVGREFGETIPACLALQK RLSAEPMALPMWMMADIDHGDVTSADPRDYDPYAWAKAVPRYSPIIHIKQSMADKGGHRP FTLPYNTHGRIQPEPLLSAFARGGAENNEICLELSFKEREPTDSQAVAGIAESVAFWAPH IDTGVQDLNI >gi|333596726|gb|GL892086.1| GENE 1550 1633176 - 1633619 456 147 aa, chain + ## HITS:1 COG:BMEII0589 KEGG:ns NR:ns ## COG: BMEII0589 COG0054 # Protein_GI_number: 17988934 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Brucella melitensis # 2 141 9 149 158 149 56.0 1e-36 MSSLKVAFIKANWHSDIVSQALVGFQQEMESQHVSCDVQSLDVPGAFEMPLLAQRLAKSG RYDAIVCAALVVDGGIYRHDFVAQAVVSGLMQAQLATEVPMYSISLTPHHFQPTAEHIGF YTDHFVKKGQEAARAVVQIHSLQMPKD >gi|333596726|gb|GL892086.1| GENE 1551 1633623 - 1634579 1061 318 aa, chain + ## HITS:1 COG:BMEII0427 KEGG:ns NR:ns ## COG: BMEII0427 COG2390 # Protein_GI_number: 17988772 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Brucella melitensis # 8 317 3 312 316 370 61.0 1e-102 MKKPLVPDSEESLGLRAAWLHYVGGLTQAAVAKRLGLPSVKTHRLIARAVAEGAVKVTID GDIVACVELESRLCARFGLNFCRVTPDLAEEGLPLRALGLAGAEYLRNLLSNNPDITIGI GHGRTLSAAIHQLPHLDASHARFVSLLGCLTRNYALNPHDVMHRIAEKTGAQAYMMPVPF FANTVEDREVLLSQRGVSEVFSMAAGSTVKLVGIGTVEPAAQLVEAGLIAVQEINDISAA GAIGEMLGHFFDARGQRITNSLTARTLAVTLDARRRENIVALVGGQSKVAATKAVLASGL LSGLITDEQTARPLLAEA >gi|333596726|gb|GL892086.1| GENE 1552 1634562 - 1635524 1030 320 aa, chain - ## HITS:1 COG:YPO3348 KEGG:ns NR:ns ## COG: YPO3348 COG2390 # Protein_GI_number: 16123498 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Yersinia pestis # 6 320 2 316 319 478 74.0 1e-135 MDKPTVSQEYELLTEIAVAYYCDEVTQEEIANKFGFSRIKVGRLLKRAKEEGIVEINVRY HPIFSTQLEKQLTERFPVSRALIALDYADESEQRRQVASLVSSYLNNVLKDNVTLAVGQG RNVAAVAENSGAISPRDCRFICGIGGTHRPGDVINADHISRLLARKFGGSSESLYAPAYV ENPQLRDLLLQNGTIKDTLDRARKADIALVGIGDMNEDSYMVKLGWFTPQEISNAGLHQG VIGDIAGYDFFNARGEHVNTVMDNRVIGLNIDELRQIPCVIAIASENTKAMAIMGALRTG AIDIIATSARNIRTVLSLSQ >gi|333596726|gb|GL892086.1| GENE 1553 1635583 - 1636353 763 256 aa, chain - ## HITS:1 COG:lin0364 KEGG:ns NR:ns ## COG: lin0364 COG0149 # Protein_GI_number: 16799441 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Listeria innocua # 6 244 5 246 254 144 35.0 2e-34 MSGNVIVGISHKAYFGYQQTQQWCEAVAAMLRQPALARAPVELFTFPAMPTLPVALCAFA DTRMATGAQNVCEAPAGAWTGETSASLLQEMGCRYVEIGHAERRRHFGETVAVINRKIDM AFANGLTPVICIGEEQRMSASEAAAFALEQAQALLAHRPLPLASLIFAWEPQWAIGAAEP ASDNFIRYVCRTLRDALHQRFGQQCRVIYGGSAGPGLLTRLWPDADGIFLGRFSHQPQAV ATILDEALALTARVRG >gi|333596726|gb|GL892086.1| GENE 1554 1636609 - 1637076 611 155 aa, chain + ## HITS:1 COG:YPO3353 KEGG:ns NR:ns ## COG: YPO3353 COG0698 # Protein_GI_number: 16123503 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 1 150 1 150 151 192 63.0 1e-49 MLKVAIGADDAATTLKNQVKTYLQEKGIEVVDFSHDVAGNDQMYPDIAFNLASSIREGQF ERGILLCGTGIGMAIVANKVPGIRAAQCHDVYSASRARKSNNAQIMTLGARVIGSELALT IVDSWLDAEFEAGRSASKVERIAYYENKVHTHNAQ >gi|333596726|gb|GL892086.1| GENE 1555 1637092 - 1638066 1070 324 aa, chain + ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 314 1 314 316 394 62.0 1e-109 MTLLEKLKAVTTVVADSGDMNAIREHHPEDATTNPSLILKAAAQPIYQPLIEQAVSLARQ QGGSQETQLINASDHLAVNIGVALLSQVPGKVSTEVDARLSYDRGLCVAKARKLIRLYEH QGVDRSRVLIKLASTWQGIKAAEELELEGIHCNLTLLFSFAQARACAEAGVWLISPFVGR IYDWYRDRNLLTSDDPQQDPGVVSVRRIYDYYKQHRYPTVIMGASFRKVEQVLALAGCDR LTISPVLLDELATRDGELPTMLKPPVIAQEAPSPLSESEFNWLHNQDPMAVDKLAEGIRL FAQDQEKLEGLLKAAFAREAVGQV >gi|333596726|gb|GL892086.1| GENE 1556 1638200 - 1638622 364 140 aa, chain - ## HITS:1 COG:VC0662 KEGG:ns NR:ns ## COG: VC0662 COG1114 # Protein_GI_number: 15640682 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Vibrio cholerae # 3 111 254 362 437 75 42.0 2e-14 MGAHSPVAAATNGLEIISHYVATVFGAYGRNLLAVIITLACLVTSIGLTTGTARYFSHAT GLSYGMLVASTLIASAAISVLGLNSLIAFAVPVLCAIYPAALVVVLLGIVRKWVSISDNV YRVIFYSALVLGVFSLFAKS >gi|333596726|gb|GL892086.1| GENE 1557 1639134 - 1639835 358 233 aa, chain + ## HITS:1 COG:yfjR KEGG:ns NR:ns ## COG: yfjR COG2378 # Protein_GI_number: 16130552 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 220 1 223 233 220 54.0 2e-57 MSQSERRHERLAVRLSLIISRLVAGETLAIQTLAAEFGVSVRTLRRDFRERLAYLDLEFR NGQCRLLSGSRQRELTVQTFVRQSGVEALFPEIDNQLVNSLLSANESPCLIWHSTNARTQ ARSEVFTRLIRAITEHRRVTLLAEGHRCTGLAPYRLVCSDGCWYLTGEHEGHISVFTLGD IHTVTFNPALFVPETQLRNLLSHPDFLRVLPHFQTFHSLLVVGDNGLACNKTS >gi|333596726|gb|GL892086.1| GENE 1558 1640148 - 1641401 1677 417 aa, chain - ## HITS:1 COG:ECs0270 KEGG:ns NR:ns ## COG: ECs0270 COG0014 # Protein_GI_number: 15829524 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 698 88.0 0 MLEQMGAAAKAASYKLALLSSREKNRVLEKIADYLESQSQEILLANEQDLLEARRNGLSE AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSGLRLERRRVPLGVIGVIYE ARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVNVIQQALEECGLPAGAVQAIESPD RALVNEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIVVDDTAEIEPALK IIVNAKTQRPSTCNTVETLLVHQGIASTFLPALSKQMAESGVTLHADDKALALLKDGPAK VVPVNAEQYDDEYLSLDLNVKVVADLDDAIAHIREHGTQHSDAILTRTLRNADRFVNEVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGFGDDTIRA >gi|333596726|gb|GL892086.1| GENE 1559 1641413 - 1642516 1035 367 aa, chain - ## HITS:1 COG:ECs0269 KEGG:ns NR:ns ## COG: ECs0269 COG0263 # Protein_GI_number: 15829523 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 668 96.0 0 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQQGLFTADPR SNPQAELIKDVHGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGSRPG VIGDVMEGLSVGTRFHAQESPLENRKRWIFGAPPAGELTVDEGATAAILERGSSLLPKGI KSVTGNFSRGEVIRIRNLEGRDIAHGVSRYNSDALRRIAGHHSQQIDAILGYEYGPVAVH RDDMIIR >gi|333596726|gb|GL892086.1| GENE 1560 1642822 - 1643874 1226 350 aa, chain + ## HITS:1 COG:ECs0268 KEGG:ns NR:ns ## COG: ECs0268 COG3203 # Protein_GI_number: 15829522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 350 1 351 351 558 85.0 1e-159 MKKSTLALVVMGVVASASVHAAEVYNKNGNKLDVYGKVKAMHYLSDDDAKDGDQTYVRFG FKGETQINDQLTGYGRWEAEFAGNKAESDSSQKTRLAFAGLKLKDFGSLDYGRNLGALYD VAAWTDMFPEFGGDGLAQTDNFMTKRASGLATYRNTDFFGLVDGLNMTLQYQGKNENRDV KKQNGDGFGTSLSYDFGGSDFSVIGAYASSDRTNEQNLQARGEGKKAEGWATGLKYDAND IYLATIYSETRNMAPISGGFANKAQNFEVVAQYQFDFGLRPSVGYVQSKGKDIEGIGDED IVKYIDVGATYYFNKNMSAFVDYKINQIDDDNKLGVSSDDIVALGLTYQF >gi|333596726|gb|GL892086.1| GENE 1561 1644005 - 1644406 445 133 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0766 NR:ns ## KEGG: Ent638_0766 # Name: not_defined # Def: DNA-binding transcriptional regulator Crl # Organism: Enterobacter_638 # Pathway: not_defined # 1 133 1 133 133 225 81.0 3e-58 MTLPSGHPKSRLIKKFMALGPYIREEQCEENRFFFDCLAVCVNVKPAPEKREFWGWWMEM EAQENRFTYSYQFGLFNKDGHWQATSIKDQEVIDRLEHTLKEFHGKARDLLATLDLKLEP ADDFSSEAVKLRA >gi|333596726|gb|GL892086.1| GENE 1562 1644463 - 1645707 1055 414 aa, chain - ## HITS:1 COG:STM0318 KEGG:ns NR:ns ## COG: STM0318 COG1073 # Protein_GI_number: 16763700 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 1 414 1 414 414 765 85.0 0 MTQANLTETLFKPRFKHPETSTLVRRFNPGTMPAVQSALDGKNVPHWYRMINRLMWIWRG IDPREILDVQARIVMSESERTDSDLYDTVVGYRGGNWIYEWSKQAMLWQQKASQEEDATR SGKHWLHAANLYSIAAYPHLKGDELAEQAQALANRAYEEAAQRLPGRMREIEFAIPGGSP VTGFLHMPEGEGPFPTVLMCGGLDSLQIDYYSLYERYFAPKGIAMLTLDMPSIGFSSKWK LTQDSSLLHQHALKALENIPWVDHTRVGAFGFRFGANVAVRLAYLESSRLKAVACLGPVV HALLSDPARQGSVPEMYLDVLASRLGMHDASDEALRIELNRYSLKTQGLLGRRCPTPMMS GFWKNDPFSPEEESRLITSSSAEGKLLEVPFSPVYQNFDKALKEITRWITKRLC >gi|333596726|gb|GL892086.1| GENE 1563 1645812 - 1646270 645 152 aa, chain - ## HITS:1 COG:STM0317 KEGG:ns NR:ns ## COG: STM0317 COG0503 # Protein_GI_number: 16763699 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 305 98.0 3e-83 MSEKYVVTWDMLQIHARKLAARLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCI SSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRP LVDDYVIDIPQDTWIEQPWDMGVVFVPPISGR >gi|333596726|gb|GL892086.1| GENE 1564 1646532 - 1647989 1879 485 aa, chain + ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 485 1 485 485 882 88.0 0 MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEHIMGWAKEKGLHAERDQVGNILIRKP ATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGM ASALAVLADDSVEHGPLEVLLTMTEEAGMDGAFGLQANWLQADILINTDSEEEGEIYMGC AGGIDFISTLPLSREAIPAGFETFKLTLKGLKGGHSGGDIHLGLGNANKLLARFLAGHAA ELDLRLVDFNGGTLRNAIPREAFATVAVPAAKADELKKLASVYLDILKNELSAKEKNLTV VLESVTTDKAALTAQSRDTFVQLLNATPNGVIRNSDVAKGVVETSLNVGVVTMGDDSAEI ICLIRSLIDSGKEYVVSMLESLGTLAGAKTSAKGSYPGWQPDASSPVMALVRETYQRLFN STPNIQVIHAGLECGLFKKPYPDMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLK AIPAK >gi|333596726|gb|GL892086.1| GENE 1565 1648045 - 1649103 1040 352 aa, chain - ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 352 1 351 351 649 89.0 0 MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTA MALKLCPHLTLLPGRFDAYKEASSHIREIFSRYTSLIEPLSLDEAYLDVTHSVHCHGSAT LMAQEIRQTIFNELNLTASAGVAPVKFLAKIASDLNKPNGQYVITPEEVPAFLKTLPLSK IPGVGKVSAAKLESMGLRTCEDVQRSDLALLLKRFGKFGRVLWERSQGIDDRDVNNERLR KSVGVERTLSEDIHDWTECETIITEQLYPELERRLLKIKPDLLIARQGIKLKFNDFQQTT QEHVWPRLNKEDLIATAKKAWEERRGGRGVRLVGLHVTLLDPQLERQLVLGL >gi|333596726|gb|GL892086.1| GENE 1566 1649211 - 1649411 185 66 aa, chain - ## HITS:1 COG:YPO3233 KEGG:ns NR:ns ## COG: YPO3233 COG2991 # Protein_GI_number: 16123392 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 64 1 65 75 93 69.0 1e-19 MLTFLATFAVFVLVIFGMSLGWIIKRKSIQGSCGGISSIGMEKVCDCPEPCDARKKRMAR EQQRII >gi|333596726|gb|GL892086.1| GENE 1567 1649414 - 1650637 1285 407 aa, chain - ## HITS:1 COG:YPO3235 KEGG:ns NR:ns ## COG: YPO3235 COG2871 # Protein_GI_number: 16123394 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Yersinia pestis # 1 407 1 407 407 674 83.0 0 MEIILGVVMFTLIVLVLSGLILAARAKLVNSGDVIIDINDDPQNQIRTPAGDKLLNTLSG NGIFVSSACGGGGSCGQCRVKVKEGGGDILPTELSHITKREAKEGCRLACQVAVRQNMKI ELPEEIFGVKKWECEVISNDNKATFIKELKLRVPEGESVPFRAGGYIQIDCPAHTVAYAD FDVPEEYRADWDKFNLFRFVSEVKEPALRAYSMANYPEEKGIIMLNVRIATPPPNVPDAP PGVMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLGS KRKISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDPQPEDNWTGYTGFIHNVLYE NYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIMLDDFGG >gi|333596726|gb|GL892086.1| GENE 1568 1650648 - 1651244 945 198 aa, chain - ## HITS:1 COG:YPO3236 KEGG:ns NR:ns ## COG: YPO3236 COG2209 # Protein_GI_number: 16123395 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Yersinia pestis # 1 198 1 198 198 291 87.0 6e-79 MAHYLSLFVRAVFVENMALAFFLGMCTFLAVSKKVSTAFGLGVAVTVVLGLSVPINNLVF NFVLRDSALVEGIDLSFLNFITFIGVIAALVQILEMILDKYFPSLYNALGIFLPLIAVNC AIFGGVSFMVQRDYNFSESVVYGFGSGIGWMLAIVTMAGIREKMKYANVPAGLRGLGITF ITTGLMALGFMSFSGVQL >gi|333596726|gb|GL892086.1| GENE 1569 1651251 - 1651889 755 212 aa, chain - ## HITS:1 COG:YPO3237 KEGG:ns NR:ns ## COG: YPO3237 COG1347 # Protein_GI_number: 16123396 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Yersinia pestis # 1 212 1 209 209 318 83.0 4e-87 MADTGELKEVKKVLIGPLLANNPITLQVLGVCSALAVTTKLETAVVMTLAVTLVTAFSSM FISMIRHHIPNSVRIIVQMAIIASLVIVVDQLLRAFAYETSKQLSVFVGLIITNCIVMGR AEAYAMKMPPLASFMDGIGNGLGYGVILLTVGFLRELIGSGKLFGIPVLDTVQNGGWYLP NGLFLLAPSAFFIIGLLIWLIRTLKPEQQEKE >gi|333596726|gb|GL892086.1| GENE 1570 1651882 - 1652676 1042 264 aa, chain - ## HITS:1 COG:YPO3238 KEGG:ns NR:ns ## COG: YPO3238 COG2869 # Protein_GI_number: 16123397 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Yersinia pestis # 5 264 7 266 266 338 67.0 7e-93 MAEIKNNDSISKTLLVVLVLCLVCSIVVAGSAVGLKPLQQEQRALDKQRNILAVAGLMQE GMTKDDVAAVFAERITARLVDLKTGELMDKDPAKYNQALALKDPQMSTTLDASQDPAGIK RRSNVAEIYLVRDEQKRVQEVVLPIYGNGLWSMMYAFVALDTDGRTVKGITYYDQGETPG LGGEVENPNWRAQFVGKKVLDDNGQPALKVVKGGARPGDEFAVDGLSGATLTSNGVQHSF DFWMGELGFGPFLKNVREGALNNG >gi|333596726|gb|GL892086.1| GENE 1571 1652669 - 1653904 1551 411 aa, chain - ## HITS:1 COG:YPO3239 KEGG:ns NR:ns ## COG: YPO3239 COG1805 # Protein_GI_number: 16123398 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Yersinia pestis # 1 411 1 412 413 642 81.0 0 MGLKHLFEKIEPHFTEGKLKKYYPLYEATSTIFYTPGLVTKGAAHVRDAIDLKRMMILVW FAVFPAMFWGMYNVGLQTIPALHHMYDAEQLAQVIQSDWHYRLAQSLGVSFAADAGWISM MTLGAVFFLPIYMTVFIVGGFWEVLFAIIRKHEINEGFFVTSILFALIVPPTLPLWQAAM GISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWTAADGFSGATPLSQW AAGGGETLVNNATGQAVTWFDAFIGNIPGSIGEVSTLMILIGGAIILFGRVASWRIVAGV MLGMVLTATLFNFIGSDTNPMFSMPWYWHLVLGGFAFGMMFMATDPVSASFTDRGKWCYG ALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPLFDYLVVRANIKRRKARG >gi|333596726|gb|GL892086.1| GENE 1572 1653907 - 1655250 1125 447 aa, chain - ## HITS:1 COG:YPO3240 KEGG:ns NR:ns ## COG: YPO3240 COG1726 # Protein_GI_number: 16123399 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Yersinia pestis # 1 447 1 447 447 664 72.0 0 MFKIRKGLDLPISGVPEQHVTTGAIVHHVAIVGDDYVGMRPAMLVQEGDRVIKGQALFED KKNPGVMFTAPASGVVVAIHRGERRVLQSVVIQIEGDEKREFARFDDADLATLSREAVQA QLLESGLWTALRTRPFSKTPVPGTVPAAIFVTAIDTNPLSADPQPVILAERKAFDAGLTV LTRLTPGKVHVCQASGGKLGGHPQGQVAFNEFAGPHPAGLVGTHIHFLEPVSLTKQVWHL NYQDVIAIGKLFTTGELCAERIVAIGGPQAVNPRLVKTLLGADINELLAGETKEGENRLI SGSVLSGRRAVNAHAYLGRFHLQVSVVLEGREKELFGWVLPGAEKYSVTRTTLGHFLRHK LFNFSTSTNGGERAMVPIGNYERVMPLDILPTVLLRDLLAGDTDGAQALGCLELDEEDLA LCTYVCPGKYEYGPVLREVLTRIEQEG >gi|333596726|gb|GL892086.1| GENE 1573 1655551 - 1656291 780 246 aa, chain + ## HITS:1 COG:ECs0251 KEGG:ns NR:ns ## COG: ECs0251 COG3034 # Protein_GI_number: 15829505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 455 89.0 1e-128 MRKIALFIAMLLIPCMSFAGLLGSNSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLFVK MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRNQLKPDSRFYKAINIGFPNA FDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALVFGQPNVQVSIYPFRMTD ANMARHKYSVYTDFWKQLKPGYDYFEQTHKPPVVSIVNGRYVVSKPLSHEVVQPQLASNY AVPETK >gi|333596726|gb|GL892086.1| GENE 1574 1656262 - 1657029 791 255 aa, chain - ## HITS:1 COG:yafJ KEGG:ns NR:ns ## COG: yafJ COG0121 # Protein_GI_number: 16128209 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Escherichia coli K12 # 1 255 1 255 255 518 93.0 1e-147 MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPI ARLVQDYPIKSCSVIAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETG NFRPVGETDSEKAFCWLLHKLAERYPRTPGNMAAVFKYIASLASELREKGVFNMLLSDGR YVMAFCSTNLFWITRRAPFGVAKLLDQDVEIDFQKETTPNDVVTVIATQPLTGNEAWQKI MPGEWVLFRLGDRVI >gi|333596726|gb|GL892086.1| GENE 1575 1657180 - 1657758 831 192 aa, chain - ## HITS:1 COG:STM0310 KEGG:ns NR:ns ## COG: STM0310 COG0279 # Protein_GI_number: 16763693 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Salmonella typhimurium LT2 # 1 192 1 192 192 366 97.0 1e-101 MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGYDHIFSRYVEAVGREGDVLLGIST SGNSANVIKAIAAAREKGMKVITLTGKDGGKMDGTADIEIRVPHFGYADRVQEIHIKVIH ILIQLIEKEMVK >gi|333596726|gb|GL892086.1| GENE 1576 1657998 - 1660442 3217 814 aa, chain + ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 814 13 826 826 1558 92.0 0 MMILSILATVVLLGVLFYHRVSLLLSSLILLAWTAALGVAGLWNIWVLVPLAIILLPFNL TPMRKSMISAPVFKGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGNPDWKKLHNYPQPRL TAEEQAFIDGPVEEACRMANDFAITHEMADLPPELWAYLKEHRFFAMIIKKEYGGLEFSA YAQARVLQKLAGVSGILAITVGVPNSLGPGELLQHYGTEEQKDHYLPRLARGQEIPCFAL TSPEAGSDAGAIPDTGVVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEK LLGGEEELGITCALIPTSTPGVEIGRRHFPLNVPFQNGPTRGQDIFVPIDYIIGGPKMAG QGWRMLVECLSVGRGITLPSNSTGGLKSVAMGIGAYAHIRRQFKISIGKMEGIEEPLARI AGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRAQQSIIDAMDIAGGKGIMLGEG NFLARGYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMAAAQNNDVDAFDKLLF KHIGHVGSNKVRSFWLGLTRGLTSATPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGS LKRRERISARLGDVLSQIFLASAVLKRYDDEGRQEADLPLVHWGVQDAMYQAEQAIDDLL ANFPNRFVAGALRVVIFPTGRHHLAPSDKLDHKVAKILQVPSATRSRIGRGQYLAPTPHN PVGLLEEALLDVMAADPIHQKICKQLGKNLPFTRLDELAKQALAGGIIDNSEAAILVKAE ESRLRSINVDDFEPEELATQPVKLPEKHRKPEAA >gi|333596726|gb|GL892086.1| GENE 1577 1660595 - 1661320 512 241 aa, chain + ## HITS:1 COG:STM0308 KEGG:ns NR:ns ## COG: STM0308 COG0388 # Protein_GI_number: 16763691 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 1 240 16 255 255 429 82.0 1e-120 MDGPANLRHFDRQLEEMTRRDVIVLPEMFTTGFAMEAAKQSMPQDEVVAWMHARAQETNA LIAGSVALQTGRGPVNRFLLVEPEGKVHFYDKRHLFRMADEHQHYEAGNERVVFEWRGWR ILPLVCYDLRFPVWSRNRNDYDLALYVANWPAPRSLHWQALLAARAIENQAYVVGCNRVG TDGNGHHYRGDSRVISPQGEIIATAEPHQATRIDAEISLTALKEYREKFPAWQDADPFTI G >gi|333596726|gb|GL892086.1| GENE 1578 1661630 - 1662370 738 246 aa, chain - ## HITS:1 COG:STM0264 KEGG:ns NR:ns ## COG: STM0264 COG0847 # Protein_GI_number: 16763647 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 4 245 1 242 243 449 90.0 1e-126 MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL VDPEAFGVHGIADEFLLDKPTFADVADEFLDYIRGAELVIHNASFDIGFMDYEFSKLNRD IPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNTKRTLHGALLDAQILADVYLT MTGGQTSMKFSMENESQQTRDEGGIQRIVRQANRLRVVLASDEELMNHESRLDLVQKKGG SCLWRT >gi|333596726|gb|GL892086.1| GENE 1579 1662426 - 1662893 409 155 aa, chain + ## HITS:1 COG:STM0263 KEGG:ns NR:ns ## COG: STM0263 COG0328 # Protein_GI_number: 16763646 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Salmonella typhimurium LT2 # 1 155 1 155 155 287 91.0 6e-78 MRKQVEIFTDGSCLGNPGPGGYGAIMRYRQHEKTFSEGYFLTTNNRMELMAAIVALEALK EHCDVVLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKNVDLWKRLDAALGQHEIKWEW VKGHAGHPENERCDELARAAASNPTHEDAGYQPES >gi|333596726|gb|GL892086.1| GENE 1580 1662894 - 1663610 556 238 aa, chain - ## HITS:1 COG:STM0262 KEGG:ns NR:ns ## COG: STM0262 COG0500 # Protein_GI_number: 16763645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 238 1 238 240 400 80.0 1e-111 MKPARIPQTVAPPERWAELPWGEYYREALELQLKPWLAKMYGFHLLKIGNLSAEINTESC AISHQVSVSLNGSPVQVKADPLHLPFAEKSIDACLLAHTLPWCSDPHRLLREADRVLIDD GWLILSGFNPLSLMGLRKLTPVLRRTPPYNSRMFTLMRQLDWLSLLNFEVLSYGGFQVIP WTRKGGVLLSTHFPALGCMQFIVARKRTIPLTLNPMKQSKSKTRIRQTVGATRQYKKP >gi|333596726|gb|GL892086.1| GENE 1581 1663643 - 1664401 251 252 aa, chain + ## HITS:1 COG:STM0261 KEGG:ns NR:ns ## COG: STM0261 COG0491 # Protein_GI_number: 16763644 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Salmonella typhimurium LT2 # 1 251 1 251 251 389 72.0 1e-108 MNLISISAFQDNYIWVLVDDDRRCIIVDPGESAPILHAIKENGWQPEAILLTHHHHDHVG GVPDLLAHYPHLPVYGPAETQNKGTTQVVVEGESILILGWEFSVFATPGHTSGHLCFYSK PYLFCGDTLFSGGCGRLFEGTPEQMYQSLQKINALPADTVICCAHEYTLGNMKFAASILP EDRAIQDYYLKVKELRAKNQKTLPVILKNERQINLFLRTDNADLINKIYQETNLLQPEAR FAWLRSKKDNFR >gi|333596726|gb|GL892086.1| GENE 1582 1664470 - 1665834 762 454 aa, chain + ## HITS:1 COG:STM0260 KEGG:ns NR:ns ## COG: STM0260 COG0741 # Protein_GI_number: 16763643 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 454 1 455 455 785 90.0 0 MKAKAILLASVLLVGCQSQNGSNVQQHAQSLSAAGQGEAGKFTSQARWLDDGTSFAQEQD LWASIGDELKMGIPENSRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMEL VLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALDMMQ RLNKMFDGDWLLTVAAYNSGEGRVLKAMKANKARGKSTDFWSLSLPQETKIYVPKMLALS DILKNSKRYGVQLPTPDESRALARVRLSSPVDIQQVADMTGMSVSKLKTFNAGVKGSTLG ASGPRYVMVPQKHAEQLRESLASGEIAAVQSTLIADTSPVSSRSYKVRSGDTLSGIASRL GVNTKDLQQWNNLRGSSLKVGQTLTVGAGSSAQRLAKNSDSITYRVRKGDSLSSIAKRHG VNIKDVMRWNNDTDNLQPGDQLTLFVKNSATPDS >gi|333596726|gb|GL892086.1| GENE 1583 1665887 - 1666660 641 257 aa, chain - ## HITS:1 COG:STM0259 KEGG:ns NR:ns ## COG: STM0259 COG0500 # Protein_GI_number: 16763642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 3 256 2 255 256 371 74.0 1e-103 MTTTHSHHDNVEKQFGSQAGAYLSSAVHASGRDLVRLGDRLAAFPDAHVLDLGCGAGHAS FTAARQVAQVTAYDLSSQMLDVVAEAAKAKGLNNITTRQGYAESLPFEDASFEVVISRYS AHHWHDVGQALREVKRVLKPGGTFIIMDVMSPGHPVRNIWLQTVEALRDTSHVQNYSSGE WLTFITEAGLISRSLITDRLPLEFASWIARMRTPEALTQAIRLYQESASADVKAYFELHY DGSFTSDTIMAEAQKAG >gi|333596726|gb|GL892086.1| GENE 1584 1666738 - 1667562 504 274 aa, chain - ## HITS:1 COG:ECs0205 KEGG:ns NR:ns ## COG: ECs0205 COG3021 # Protein_GI_number: 15829459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 9 274 1 266 266 492 91.0 1e-139 MLQRSFPKVRKNTYAMRYVAGMPAERILPPGSFASLGQALPAGTPLSSDEKIRVLVWNIF KQQRAEWLSVLKNFGKDAHLVLLQEAQTTPELVRFATTHYLAADQVPAFVLPQHPSGVMT LSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLL PIGDQIAHHSGPIIMAGDFNAWSRPRMNALYRFAREMSLREVRFSDDQRKKAFGRPLDFV FYRGLSVHDASVLVTRASDHNPLLVEFSPGKPDK >gi|333596726|gb|GL892086.1| GENE 1585 1667676 - 1668851 1064 391 aa, chain - ## HITS:1 COG:STM0257 KEGG:ns NR:ns ## COG: STM0257 COG2814 # Protein_GI_number: 16763640 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 390 1 390 391 561 90.0 1e-160 MPLALLALTISAFAIGTTEFVIVGLVPTIADQLAISLPSAGLLVSIYALGVAVGAPVLTA LTGRFPRKQLLVALMVLFTAGNILAWQSPDYTTLVIARLLTGLAHGVFFSIGSTIATSLV PKEKAASAIAIMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSLLGVIALVASLLLVPS NIPGRASASLSDQVKVLTHPRLLLIYAVTALGYGGVFTAFTFLAPMMQELAGFSPGAVSW ILLGYGISVAIGNIWGGKLADKHGAVPALKFIFAALVVLLMIFQFTASTHYAALVTVLVM GIFAFGNVPGLQVYVVQKAERYTPNAVDVASGLNIAAFNIGIALGSVIGGQTVEHVGLTQ TPWIGAVIVLVAFLLIGLSGRLDKPARVALG >gi|333596726|gb|GL892086.1| GENE 1586 1668956 - 1669861 523 301 aa, chain + ## HITS:1 COG:STM0256 KEGG:ns NR:ns ## COG: STM0256 COG0583 # Protein_GI_number: 16763639 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 300 1 300 304 537 92.0 1e-153 MKATSEELTIFVAVVESGSFSRAAEQLGQANSAVSRSVKKLEMKLGVSLLNRTTRQLSLT EEGERYFRRVQSVLQEMAAAETEIMESRSTPRGLLRIDAATPVVLHFLMPLIKPFRERYP EMTLSLVSSETFINLIERKVDVAIRAGTLTDSSLRARPLFTSYRKIIASPQYIAEHGKPE TVEELKQHLCLGFTEPVSLNTWPVACHDGQLHEITCGLSSNSGETLKQLCLEGNGIACLS DYMIDKEIAAGQLVELMADKRLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHIKTAPGGA A >gi|333596726|gb|GL892086.1| GENE 1587 1669893 - 1670696 948 267 aa, chain - ## HITS:1 COG:STM0255 KEGG:ns NR:ns ## COG: STM0255 COG0656 # Protein_GI_number: 16763638 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 469 90.0 1e-132 MTIPALGLGTFRLKDDVVIASVKTALELGYRAIDTAQIYDNEAAVGQAIEESGVPRHELF ITTKIWIENLSKDKLIPSLKESLKKQRTDYVDLTLIHWPSPDDAVSVEEFMQALLEAKEQ GLTREIGISNFTIPLMERAIAAVGKENIATNQIELSPYLQNRNVVDWAQQHGIHITSYMT LAYGKALKDEVIARIAEKHNATAAQVILAWAMGEGYAVIPSSTKRENLASNLLARDLQLD HEDKKAIAALECNDRLVSPEGLAPDWD >gi|333596726|gb|GL892086.1| GENE 1588 1674662 - 1675228 464 188 aa, chain - ## HITS:1 COG:ECs0202 KEGG:ns NR:ns ## COG: ECs0202 COG0241 # Protein_GI_number: 15829456 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Escherichia coli O157:H7 # 1 188 1 188 191 354 88.0 4e-98 MAKSVPAIFLDRDGTINVDHGYVHEIDEFEFIEGVIDAMRQLKEMGYALVVVTNQSGIAR GKFTEAQFETLTEWMDWSLADRGVDLDGIYYCPHHPQGSVEAYRQTCDCRKPHPGMFISA QEFLHIDMAASYMVGDKLEDMQAAAAAGVGTKVLVRTGKPVTPEAENAADWVIKSLADLP KEIKKHQK >gi|333596726|gb|GL892086.1| GENE 1589 1675417 - 1676448 1131 343 aa, chain + ## HITS:1 COG:STM0247 KEGG:ns NR:ns ## COG: STM0247 COG1135 # Protein_GI_number: 16763636 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 343 1 343 343 640 95.0 0 MIKLSNITKVFQQGNRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTQG SVEVGGQELTALSEKELTKARRQIGMIFQHFNLLASRTVFGNVALPLELDNTPKEEVTRR VTELLDLVGLGDKHDSYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQQF IQSTLHLDIPEDYLERLKTDATPDSVPMLRMEFTGQSVDAPLLSETARRFNVNNNIISAQ MDYAGGVKFGIMLTEMHGTQEETQAAIAWLQEHHVKVEVLGYV >gi|333596726|gb|GL892086.1| GENE 1590 1676441 - 1677094 806 217 aa, chain + ## HITS:1 COG:yaeE KEGG:ns NR:ns ## COG: yaeE COG2011 # Protein_GI_number: 16128191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Escherichia coli K12 # 1 217 1 217 217 308 97.0 5e-84 MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIENAKLYRTLSALV NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYNATVMNTVLVLLVVLVYLIQFSGDRIVRAVTHK >gi|333596726|gb|GL892086.1| GENE 1591 1677135 - 1677950 1128 271 aa, chain + ## HITS:1 COG:ECs0199 KEGG:ns NR:ns ## COG: ECs0199 COG1464 # Protein_GI_number: 15829453 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 492 95.0 1e-139 MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEAAQKIAKEKYGLD VELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQIKDRGYKLVAVGNTFVYPIAGYSKK IKSLDELQPGSQVAVPNDPTNLGRSLLLLQKVGLIKLKEGVGLLPTVLDVTENPKNLKIV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKDSPYVNLIVTREDNKDA ENVKKFLQAYQSEEVYQEANKVFNGGAVKGW >gi|333596726|gb|GL892086.1| GENE 1592 1678057 - 1678461 256 134 aa, chain + ## HITS:1 COG:no KEGG:SG0248 NR:ns ## KEGG: SG0248 # Name: rcsF # Def: outer membrane lipoprotein # Organism: S.enterica_Gallinarum # Pathway: Two-component system [PATH:seg02020] # 1 134 1 134 134 211 93.0 1e-53 MRALPICLLALMLSGCSMLSRSPVEPVQSTATPPKAEPAKPKAPRAAPVRIITKADELVG KPFRELGEVSGESCQATNQDSPPNIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYR QAVCIGSALNITAK >gi|333596726|gb|GL892086.1| GENE 1593 1678458 - 1679165 581 235 aa, chain + ## HITS:1 COG:STM0243 KEGG:ns NR:ns ## COG: STM0243 COG1720 # Protein_GI_number: 16763632 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 235 1 235 235 406 84.0 1e-113 MSSFQFEQIGVIRSPYKEKFAVPRQPGLVMNGGGELHLVAPYNQADAVRGLEAFSHLWVV FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKGIRCQKDQVILE LGSLDLVDGTPVIDIKPYLPFAEALPDARASYAQDAPQADMPVHFTSEITTQLSQLETRY PRLRDFIVEVLAQDPRPAYRKEEEAGKTYAVWLLDFNVRWRVTAAGFEVFALEPR >gi|333596726|gb|GL892086.1| GENE 1594 1679277 - 1680995 2185 572 aa, chain + ## HITS:1 COG:ECs0196 KEGG:ns NR:ns ## COG: ECs0196 COG0442 # Protein_GI_number: 15829450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1077 92.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE MNNAGAIEVLMPVVQPSELWQESGRWEQYGPELLRIADRGDRPFVLGPTHEEVITDLIRN ELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDKMYAA YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVIFSDSSDYAANIEFAEALA PKEPRGAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKSAEGSAYPLVALLVRG DHELNEVKAEKLPQVASPLTFATEAEIRAVVNAGPGSLGPVNLPVPVVIDRTVAAMSDFS AGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGKGTLMIKRGIEVGHIFQLGDK YSRAMNAAVQGEDGRNQVLTMGCYGIGVTRVVAAAIEQNYDERGIVWPDNIAPFQVAILP MNMHKSYRVQELAEKLYAELSAKGIDVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLD SDEIEYKYRRNGEKQMIKTGDILDYLVKAIKG >gi|333596726|gb|GL892086.1| GENE 1595 1681041 - 1681622 520 193 aa, chain - ## HITS:1 COG:ECs0194 KEGG:ns NR:ns ## COG: ECs0194 COG3015 # Protein_GI_number: 15829448 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Escherichia coli O157:H7 # 1 192 41 233 236 295 73.0 4e-80 MQQSWRGVLPCADCEGIETSLFLQKDGTWVMNQRYQGAKEPSSFATYGTWARTAEKLVLT DTTGDKTYFRAKGEGMEMLDREGNPIESQFNYTLAPVKATLPATPMAMRGMYFYMADAAI FTDCATGKKVSVANNAQLERDYAVARGNDSKPVLLTVEGHFTLEPNPDSGELVKTLVADK DAKFAAGKDCESK >gi|333596726|gb|GL892086.1| GENE 1596 1681779 - 1682195 206 138 aa, chain - ## HITS:1 COG:STM0240 KEGG:ns NR:ns ## COG: STM0240 COG1186 # Protein_GI_number: 16763630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 138 1 138 140 183 85.0 7e-47 MIVLSRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASSLPEYYKESLLAAS HHLITSEGVMVIKAQEYRSQELNREAAIARLVAVIKELTAVQKSRRATRPTRASKERRLS SKAQKSTVKSLRGKVRHP >gi|333596726|gb|GL892086.1| GENE 1597 1682192 - 1682737 629 181 aa, chain - ## HITS:1 COG:STM0239 KEGG:ns NR:ns ## COG: STM0239 COG4681 # Protein_GI_number: 16763629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 290 87.0 1e-78 MALKATIYKAVVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWIKYADDRLQFTRG LSAEDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQSAEVALFAYNQRAAEIWWQQIK NKCAQFKNLTVWYLDDEQLSQLSAFASRTMALQATIQDGAIWLSDSQNNLEIHLTAWQPA S >gi|333596726|gb|GL892086.1| GENE 1598 1683126 - 1683380 261 84 aa, chain + ## HITS:1 COG:ECs0191 KEGG:ns NR:ns ## COG: ECs0191 COG4568 # Protein_GI_number: 15829445 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 84 3 86 86 146 92.0 1e-35 MNDTYQPINCDDYDNLELACQHHLILTLELKDGEVLKAKASDLVSRKNVEYLVVEDAGAT RELRLDKIASFSHPEIGTVVVSES >gi|333596726|gb|GL892086.1| GENE 1599 1683407 - 1684693 749 428 aa, chain - ## HITS:1 COG:STM0236 KEGG:ns NR:ns ## COG: STM0236 COG0037 # Protein_GI_number: 16763626 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Salmonella typhimurium LT2 # 14 428 14 430 430 546 66.0 1e-155 MTLPAIAHAVSPYRQLLVGFSGGLDSTVLLHRLKLWRDREPDVQLRAMHIHHGLSPHADE WVAHCEAVCSGWAIPLIVERVTLEDEGLGIEAQARKARYAAFSGALQPGEALVTAQHLDD QCETFLLALKRGSGPAGLSAMPERADFAGTELIRPLLGEMRASLEAWAQQHHLRWIEDES NQDDSYDRNFLRLRVLPLLSERWAHFSEAAARSAMLCAEQESLLDELLNEELNSLITADG ALNIAPLNVMSPVRRAALIRRWLATHRAAMPSRAMLNRIWEEVAEAREDAAPCIHLNGFD VRRYKGQLWWVKSVPSMADVVLDWPSPAKALTLPLNAGVVALSPSGNVRLPEPDENVTIR FRASGMLHIVGRNGGRKLKKIWQEQSVPPWRRDTTPLLFYGDTLIAAAGVFITQAGWAEA GVKFEWKA >gi|333596726|gb|GL892086.1| GENE 1600 1684752 - 1685141 446 129 aa, chain - ## HITS:1 COG:ECs0189 KEGG:ns NR:ns ## COG: ECs0189 COG0346 # Protein_GI_number: 15829443 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Escherichia coli O157:H7 # 1 129 10 138 138 240 86.0 4e-64 MLGLKAVHHIAIIANDYAKSKAFYCDVLGFTLLSEAYREERDSWKGDLALNGQYVIELFS FPFPPARPSRPEACGLRHLAFSVDDLDSAVKHLEAHGVACEAIRVDPFTDKRFTFFNDPD GLPLELYQQ >gi|333596726|gb|GL892086.1| GENE 1601 1685208 - 1687340 2163 710 aa, chain - ## HITS:1 COG:STM0234 KEGG:ns NR:ns ## COG: STM0234 COG1982 # Protein_GI_number: 16763624 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 710 1 710 713 1368 89.0 0 MNIIAIMGPHGVFYKDEPIKELEQALKARGYQLIWPQNSADLLKFIEHNPRICGVIFDWD EYDMELCSDINKLNEYLPLYAFINTHSTMDVSAHDMRMALWFFEYSLGVAEDIATRIQQY TGEYLDNITPPFTRALFTYVNEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI DRNCHKSLAHLLMMSDVVPLWLSPTRNALGILGGIPRREFAHDAIETKIAAIPEASWPVH AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTNFHPIYSGKSGMSGERVPGKVFF ETQSTHKMLAAFSQASLIHIKGEYDEDTFNEAFMMHTTTSPSYPLVASIETAAAMLRGNP GKRLINRSVERALHFRKEVQRLKDEADGWFFDIWQPEEIDEAECWPVAPGESWHGFRDAD ADHMFLDPVKVTILTPGMDEQGVMGEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG IDKTRAMGLLRGLMEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQH DLPRLMLQAFDVLPEMKLTPHRAWQRQVKGEVETVELENLVGRVSANMILPYPPGVPLLM PGEMITEESRAVLDFLLMLCSVGRHYPGFETDIHGAKRDDNGVYWVRVLK >gi|333596726|gb|GL892086.1| GENE 1602 1687441 - 1688400 1313 319 aa, chain - ## HITS:1 COG:ECs0187 KEGG:ns NR:ns ## COG: ECs0187 COG0825 # Protein_GI_number: 15829441 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 602 96.0 1e-172 MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGA WQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSRLSVPVICTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAAEAMGIIAPRLKELKLIDTVIPEPLGGAHRKPEVMAASLKAQLLADLADLDVL SKEDLLNRRYQRLMTYGYA >gi|333596726|gb|GL892086.1| GENE 1603 1688413 - 1691895 4070 1160 aa, chain - ## HITS:1 COG:STM0231 KEGG:ns NR:ns ## COG: STM0231 COG0587 # Protein_GI_number: 16763621 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 1160 1 1160 1160 2273 94.0 0 MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA GLKPIVGADFHVQSDLIGDELTQISVLAMNNTGYQNLTLLISKAYQRGYGALGPWIDRDW LAELNEGLLLISGGRMGDVGKCLLRGNNALVDQCVSFYEEYFPDRYYLELIRTGRADEES YLHAAVALAEERGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM RNEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL EERLEFLFPDEAVRKEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY LTGHPINQYLKEIERYVGGHRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD RLLNDLRGLIGSEQVELEFD >gi|333596726|gb|GL892086.1| GENE 1604 1691934 - 1692530 525 198 aa, chain - ## HITS:1 COG:rnhB KEGG:ns NR:ns ## COG: rnhB COG0164 # Protein_GI_number: 16128176 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Escherichia coli K12 # 1 198 1 198 198 343 89.0 9e-95 MMEFIYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLNDSKKLSEKRRLALFDE IKEKALAWSLGRAEPEEIDDLNILHATMLAMQRAVAGLKIVPEYVLIDGNRCPALPMPSM AVVKGDSRVAEISAASIIAKVTRDAEMAALDLTYPAYGFAQHKGYPTAFHLEKLAEHGAT EHHRRSFGPVKRALGLVS >gi|333596726|gb|GL892086.1| GENE 1605 1692527 - 1693675 1078 382 aa, chain - ## HITS:1 COG:lpxB KEGG:ns NR:ns ## COG: lpxB COG0763 # Protein_GI_number: 16128175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Escherichia coli K12 # 1 382 1 382 382 698 92.0 0 MVDSRPLTIALVAGETSGDILGAGLIRALKARVPNARFVGVAGPLMQAEGCEAWYEMEEL AVMGIVEVLGRLRRLLHIRADLTRRFTDLKPDVFVGIDAPDFNITLEGNLKKQGIKTIHY VSPSVWAWRQKRVFKIGRSTNLVLAFLPFEKAFYDRFNVPCRFIGHTMADAMPLDPDKNA ARDALGIPHDVHCLALLPGSRGAEVEMLSADFLKTAQILRKTYPDLEVVVPLVNAKRREQ FERIKADVAPDLHVRLLDGKGREAMFASDAALLASGTAALECMLAKCPMVVGYRMKPFTF WLAKRLVKTDYVSLPNLLAGRELVKELLQDECQPQALAEALLPLLANGKTSHQMHDTFRE LHQLIRCNADEQAADAVLELAQ >gi|333596726|gb|GL892086.1| GENE 1606 1693675 - 1694463 651 262 aa, chain - ## HITS:1 COG:lpxA KEGG:ns NR:ns ## COG: lpxA COG1043 # Protein_GI_number: 16128174 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Escherichia coli K12 # 1 262 1 262 262 474 91.0 1e-134 MIDKSAFIHPTAIVETGAIIGANVHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTTIGCNN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTTQGGGLTKVGSDNLFMVN AHIAHDCTVGSRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQD VPPFVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLLYRSGKTLEEAKPEIAELA NKHPEVKTFMEFFERSTRGLIR >gi|333596726|gb|GL892086.1| GENE 1607 1694467 - 1694922 359 151 aa, chain - ## HITS:1 COG:ZfabZ KEGG:ns NR:ns ## COG: ZfabZ COG0764 # Protein_GI_number: 15799862 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 EDL933 # 1 151 1 151 151 291 97.0 3e-79 MTTDTHTLHIEEILELLPHRYPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI FPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT RRGLTRFKGVAMVDGKVVCEATMMCARSREA >gi|333596726|gb|GL892086.1| GENE 1608 1695027 - 1696052 949 341 aa, chain - ## HITS:1 COG:lpxD KEGG:ns NR:ns ## COG: lpxD COG1044 # Protein_GI_number: 16128172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Escherichia coli K12 # 1 341 1 341 341 600 90.0 1e-172 MPSIRLADLAQQLDAELHGDGDIVITAVASMQSAKAGTITFMVSPKYREHLAQCQASAVV LTQDDLPFASGAALVVKNPYLTYARMAQILDTTPQPAQNIAASAAIDPTAQLGNNVAIGA NAVIESGVVLGDNVVIGPGCFVGKNTKIGAGTRLWANVSVYHEVEIGENCLVQSSTVIGS DGFGYANDRGNWVKIPQLGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHN VVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGV YSSGIPLQPNKVWRKTAALVMNIDDMSKRLKAIERKIDQQD >gi|333596726|gb|GL892086.1| GENE 1609 1696056 - 1696511 482 151 aa, chain - ## HITS:1 COG:STM0225 KEGG:ns NR:ns ## COG: STM0225 COG2825 # Protein_GI_number: 16763615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 151 14 161 161 168 84.0 3e-42 MATSAQAADKIAIVNMGNLFQQVAQKTGVSATLENEFKGRASELQRMEGDLQSKMQRLQR DGSTMKASERSKLEKDVMSQRQTFSQKAQAFEQDRQRRSNEERGKLVTRIQSAVKAVAAD QSIDLVVDANAVAFNSSDVKDITADVLKQVK >gi|333596726|gb|GL892086.1| GENE 1610 1696674 - 1699091 2780 805 aa, chain - ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 805 1 810 810 1430 88.0 0 MAMKKLLIASLLFSSATVYGADGFVVKDIHFEGLQRVAVGAALLSMPVRPGDTVNDEDIS NTIRALFATGNFEDVRVLRDGDTLVVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGESLDRTTLADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAKIQQI NIVGNHAFSTDELISNFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYITVNITEGDKYTLSGVEVSGNLAGHSAEIESLTKIQPGDLYSGSK VTKMEDSIKKLLGRYGYAYPRVQTQPEINDTDKTVKLHINVDAGNRFYVRKIRFEGNDTS KDSVLRREMRQMEGAWLGSDLVDQGKERLNRLGYFETVDTDTQRVPGRPDQVDVVYKVKE RNTGSFNFGIGYGTESGVSFQVGVQQDNWLGTGYSVGINGTKNDYQTYSEFSVTNPYFTV DGVSLGGRIFYNDFKADDADLSSYTNKSYGLDGTLGFPVNEYNTLRAGLGYVHNDLSNMQ PQVAMWRYLDSIGQSASTSSDDNGFAADDFTFNYGWTYNRLDRGYFPTEGSRVNLNGKVT IPGSDNEFYKVTLDTASYFPIDEDHKWVVLGRTRWGYGDGIGSKELPFYENFYAGGSSTV RGFQSNNIGPKAVYYGGNDEDNCASRDPKQVCSSDDAVGGNAMAVASLEFITPTPFISDK YANSVRTSFFMDAGTVWDTNWENTAQMRAAGVPDYSDPGNIRMSAGIALQWMSPLGPLVF SYAQPFKKYDGDKAEQFQFNIGKTW >gi|333596726|gb|GL892086.1| GENE 1611 1699123 - 1700475 976 450 aa, chain - ## HITS:1 COG:STM0223 KEGG:ns NR:ns ## COG: STM0223 COG0750 # Protein_GI_number: 16763613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Salmonella typhimurium LT2 # 1 450 1 450 450 810 91.0 0 MLSILWNLAAFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKSLWKRTDKHGTEFV IALIPLGGYVKMLDERVEPVAPELRHRAFNNKTVGQRAAIIAAGPVANFIFAIFAYWLVF IIGVPGVRPVVGEITTGSVAATAQITPGMELKAIDGIETPDWDAVRLQLVAKIGDEQTTV SVSPFGSDQRQEKVLDLRHWRFEPDKEDPVAALGIRPRGAQIEPVLAEVQAKSAASKAGL QAGDRIVKVDGQPLTQWMTFVTLVRDNPGTPLALEVERQGSALSLTLTPDTKSGGGKAEG FAGVVPKVIPLPDEYKTIRQYGPFSAIVEATDKTWQLMKLTVNMLGKLITGDVKLNNLSG PISIAQGAGMSAEFGVIYYLMFLALISVNLGIINLFPLPVLDGGHLLFLAIEKLKGGPVS ERVQDFSYRIGSILLVLLMGLALFNDFSRL >gi|333596726|gb|GL892086.1| GENE 1612 1700487 - 1701236 645 249 aa, chain - ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 385 89.0 1e-107 MLAAWEWGQLSGFTSRTQRVWLAVLCGFLLALMLYTLPEYHHDVHQPLVAGSLWISLAWW IAALVLVLFYPGSAAIWRNSKVLRLIFGLLTIVPFFWGMVALRAWHYDENHYSGAIWLLY VMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLFTAAIISWGYGVWANLEVA PSTLLVCSIFAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFGTI >gi|333596726|gb|GL892086.1| GENE 1613 1701357 - 1702046 403 229 aa, chain - ## HITS:1 COG:STM0221 KEGG:ns NR:ns ## COG: STM0221 COG0020 # Protein_GI_number: 16763611 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 229 24 252 252 431 93.0 1e-121 MDGNGRWAKRQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRPAQEVTA LMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKAEALTENNTGLTLNIAAN YGGRWDIIQGVRHLAEQVQEGLLSPDQIDEEALSQQICMNELAPVDLVIRTGGEHRISNF LLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGTEPGGDNA >gi|333596726|gb|GL892086.1| GENE 1614 1702301 - 1703500 973 399 aa, chain - ## HITS:1 COG:dxr KEGG:ns NR:ns ## COG: dxr COG0743 # Protein_GI_number: 16128166 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Escherichia coli K12 # 1 398 1 398 398 664 85.0 0 MKHLTLLGSTGSIGCSTLDVVRHNPDRYTVAALVAGKNVQRMVEQCLEFTPRFAVMDDEE SARQVKALLQEKGCRTEVLSGQQAACDMAALDEVDQVMAAIVGAAGLLPTLAAIDAGKDV LLANKESLVTCGRLFMEAVKKRGARLLPVDSEHNAIFQSLPQPFQQNLGYADLEQNGVVS ILLTGSGGPFRETPLSELSAMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN ASAKQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVKSGVKPLDFC KLSSLTFSEPDYDRYPCLKLAMTAFDQGQAATTALNAANEVTVDAFLNQQIRFTDIAALN LSVLEMMDLREPQSVEEVLAVDEQARIVARKQVTRLASW >gi|333596726|gb|GL892086.1| GENE 1615 1703593 - 1704114 647 173 aa, chain - ## HITS:1 COG:ECs0174 KEGG:ns NR:ns ## COG: ECs0174 COG0233 # Protein_GI_number: 15829428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Escherichia coli O157:H7 # 1 173 13 185 185 268 91.0 4e-72 MDKCVEAFKNQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFDR SMSPAVEKAIMASDLGLNPSSAGADIRVPLPPLTEERRKDLIKVVRGEAEQGRVSVRNVR RDANDKVKALLKEKEISEDDDRRSQDDIQKMTDAAIKKIDAALAEKEAELMQF >gi|333596726|gb|GL892086.1| GENE 1616 1704318 - 1705043 967 241 aa, chain - ## HITS:1 COG:STM0218 KEGG:ns NR:ns ## COG: STM0218 COG0528 # Protein_GI_number: 16763608 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 458 98.0 1e-129 MATNAKPVYKRILLKLSGEALQGSEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNL FRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDNYSWA EAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPS ATMYDQLSYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLIT E >gi|333596726|gb|GL892086.1| GENE 1617 1705193 - 1706044 1009 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 279 283 393 72 1e-107 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG VIITKIDGTYGIILEVNCQTDFVAKDAGFQAFANKVLDAAVAGKITDVEVLKAQFEEERV ALVAKIGENINIRRVASLEGDVLGSYQHGARIGVLVAAKGADEELVKQLAMHIAASKPEF VKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMDPSK SVAQLLKEHNADVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS >gi|333596726|gb|GL892086.1| GENE 1618 1706162 - 1706887 1222 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206581012|ref|YP_002240343.1| ribosomal protein S2 [Klebsiella pneumoniae 342] # 1 241 1 241 241 475 98 1e-132 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI SSRKGKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ SQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLSAVAATVREGRSQDLASQAEESFVEA E >gi|333596726|gb|GL892086.1| GENE 1619 1706989 - 1707087 112 32 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] # 1 27 1 27 307 47 77 1e-142 MVSDRVLWYKARRTSDPSQIHRLDGSDKSHFV >gi|333596726|gb|GL892086.1| GENE 1620 1707209 - 1708003 966 264 aa, chain + ## HITS:1 COG:STM0215 KEGG:ns NR:ns ## COG: STM0215 COG0024 # Protein_GI_number: 16763605 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 264 1 264 264 493 89.0 1e-139 MAISIKTPEEIEKMRVAGRLAADVLEMIEPFVKPGVSTGELDRICNDYIVNEQHAVSACL GYHGFPKSVCISINEVVCHGIPDDEKLLKDGDIVNIDVTVIKDDYHGDTSKMFIVGKPTI LGERLCKVTQESLYLALKMVKPGIRLRTLGAAIQKFVEAEGFSVVREYCGHGIGRVFHEE PQVLHYDADDGGVVLQKGMTFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEIMTLRKDDTIPAILTNIE >gi|333596726|gb|GL892086.1| GENE 1621 1708066 - 1710741 2581 891 aa, chain + ## HITS:1 COG:STM0214 KEGG:ns NR:ns ## COG: STM0214 COG2844 # Protein_GI_number: 16763604 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Salmonella typhimurium LT2 # 3 891 2 890 890 1660 91.0 0 MSNLLPEQYANTALPTLPDQPDNPGVWPPHELTCAHIKAHMAVFHRWLGSAFDAGVSAEQ LIEARTEFIDQLLQRLWIDYGFGQVSDVALVAVGGYGRGELHPLSDIDLLILSRKKLPDE QAQKIGELLTLLWDVKLEVGHSVRTLEECLLEGLSDLTVATNLIETRLLIGDVALFLELQ KHIFSDGFWPSEKFFAAKVDEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRH FGATSLDEMVGFGFLTEAERNELNECLHLLWRIRFALHLEVTRYDNRLLFDRQLSVAQRL NYQGEGNEPVEQMMKDFFRVTRRVSELNQMLLQLFDEAILALTADEKPRPIDDEFQLRGT LIDLRDETLFIREPEAILRMFYTMVRNSTITGIYSTTLRHLRHARRHLKQPLCYIPEARS LFLSMLRHPGAVSRGLLPMHRHSVLWAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKL ESFAKEETRSRHPLCVDLWPRLSHPELILIAALFHDIAKGRGGDHSVLGAQDVLKFAELH GLNSRETQLIAWLVRHHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADIC ATNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNINEEA LHQIWARCRANYFVRHSPNQLAWHARHLLKHDLTKPMILLSPQATRGGTEIFIWSPDRPY LFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSSDRHEGIRFGLEQAIT QRSWQPPQPRRQPAKLRHFTVDTEVNFLPTHTDRKSFLELIALDQPGLLARVGQVFADLG ISLHGARITTIGERVEDLFIIATADRRALNNDLQLEVQQRLTAALNPNDKG >gi|333596726|gb|GL892086.1| GENE 1622 1710774 - 1711598 989 274 aa, chain + ## HITS:1 COG:STM0213 KEGG:ns NR:ns ## COG: STM0213 COG2171 # Protein_GI_number: 16763603 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Salmonella typhimurium LT2 # 1 274 1 274 274 515 98.0 1e-146 MQQLQNVIESAFERRADITPANVDTVTREAVNQVISLLDSGALRVAEKIDGQWVTHQWLK KAVLLSFRINDNQVIDGAESRYFDKVPMKFAEYDEARFQKEGFRVVPPAAVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID >gi|333596726|gb|GL892086.1| GENE 1623 1711710 - 1712096 436 128 aa, chain + ## HITS:1 COG:no KEGG:ECL_00967 NR:ns ## KEGG: ECL_00967 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 127 1 127 129 219 98.0 3e-56 MYDNLKSLGITNPDEIDRYSLRQEANNDILKIYFHKDKGEFFAKSVKFKYPRQRKTVVAD GIGQGYKEVQEISPNLRYVIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA DLEKLTRK >gi|333596726|gb|GL892086.1| GENE 1624 1712189 - 1713376 1466 395 aa, chain - ## HITS:1 COG:STM0210 KEGG:ns NR:ns ## COG: STM0210 COG3835 # Protein_GI_number: 16763600 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Salmonella typhimurium LT2 # 11 395 1 385 385 696 95.0 0 MLELCSREGYMAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEG ALLVLSQGRVVDIDDAVAKHLHGVRQGINLPLRLEGEIVGVIGLTGDPESLRKYGELVCM TAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEEHTPALSEWAQRLGIDLNQPRVVAVIE VDSGQLGVDSAMVELQQLQNMLATPERNNLVAIVSLTEMVVLKPALNQFGRWDAEDHRRR VELLIERMKENGQLRFRVALGNYFTGPGSIARSWRTARTTMMVGKQRMPESRSYFYQDLM LPVLLDSLRGGWQANELARPLVRLKAMDNNGLLRRTLQAWFRHNVQPLATSKALFIHRNT LEYRLNRISELTGLDLGNFDDRLLLYVALQLDEQR >gi|333596726|gb|GL892086.1| GENE 1625 1713493 - 1714926 1527 477 aa, chain - ## HITS:1 COG:STM0209 KEGG:ns NR:ns ## COG: STM0209 COG0265 # Protein_GI_number: 16763599 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Salmonella typhimurium LT2 # 1 477 1 475 475 720 92.0 0 MKKTTLAMSALALSLGLALSPLAMAAETASSAATAQQMPSLAPMLEKVMPSVVSINVEGS TTVNTPRMPRNFQQFFGDNSPFCQDGSPFQSSPFCQGGGAGDDGQGGGQQQKFMALGSGV IIDAAKGYVVTNNHVVDNASTIKVQMSDGRKFDAKVVGKDPRSDIALIQIQDPKNLTAIK LADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSG GALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTAQMVQYGQVKRGELGIMGTE LNSELAKAMKVDAQRGAFVSQVMPNSSAAKAGIKAGDVITSLNGKPISSFAALRAEVGSM PIGSKVTLGLLREGKPVNVSLELQQSSQNQVDSSTIFSGIEGAEMSNKGADKGVVVNNVK ANSPAARIGLKKGDVIMGANQQPVKNIAELRKILDSKPSVLALNIQRGDTSIYLLMQ >gi|333596726|gb|GL892086.1| GENE 1626 1715059 - 1716573 1114 504 aa, chain - ## HITS:1 COG:ECs0164 KEGG:ns NR:ns ## COG: ECs0164 COG0232 # Protein_GI_number: 15829418 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Escherichia coli O157:H7 # 1 504 1 504 505 870 84.0 0 MSPIDFRTKINWHRRYRSPQGEKNEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERN AAVRTRLTHSMEVQQVGRYIAKEILSRLKEQRLLDTYGLDELTGPFESIVEMACLMHDIG NPPFGHFGEAAINDWFKQRLFPSDAISQPLSDDRCVVRDLCLREGEDSLNDLRRKVRQDL CHFEGNAQGIRLVHSLMRMNLTWAQVGCILKYTRPAWWTGETPATHSYLMKKPGYYLSEE GYIARLRKELSLTPNGRFPLTWIMEAADDISYCVADLEDAVEKRIFSVEELYQHLHDAWG EHEKGSLFAQVVENAWDKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAARFIDNLPMIF SGEFNHALLEDESSFSQLLELYKNVAVRHVFSHPDVEQLELQGYRVISGLLEIYGPLLQL TVDEFSELVENERVRRLPIESRLYQKLSTRHRLAYIEAVSKIDRHSSQWPVLEYYYRCRL IQDYISGMTDLYAWDEYRKLMAVE >gi|333596726|gb|GL892086.1| GENE 1627 1716656 - 1717354 892 232 aa, chain + ## HITS:1 COG:STM0207 KEGG:ns NR:ns ## COG: STM0207 COG0775 # Protein_GI_number: 16763597 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 403 94.0 1e-112 MKIGIIGAMEEEVTLLRDKIENRQTLSLGGCEIYTGQLNGVDVALLKSGIGKVAAALGAT LLLERCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK ADDKLIAAAESCINELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAVAVEMEATAIAH VCHNFSVPFVVVRAISDVADQQSHISFDEFLAVAAKQSTVMVETLVQKLARG >gi|333596726|gb|GL892086.1| GENE 1628 1717356 - 1718156 470 266 aa, chain + ## HITS:1 COG:STM0206 KEGG:ns NR:ns ## COG: STM0206 COG0614 # Protein_GI_number: 16763596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 3 261 6 264 266 377 76.0 1e-104 MSFRALAALLLLAPAWLIAAPRVITLSPANTELAFAAGITPVAVSSFSDYPPQAAHIEQV ATWQGMNLERIVALKPDLVLAWRGGNAERQVNQLSSLGITVKWVDAVSIEQVAQALRELA PFSPTPQRAVQAAQQMLNDYAALKTRYGTQPKQRVFLQFGSQPLFTTGKGSIQNQVLETC GGENIFAESRIPWPQVSREQVLARQPQAIVVVGNASEIPKIEQFWHQQLKIPVIALNSDW FERASPRIILAAKQLCAKLAESHSNR >gi|333596726|gb|GL892086.1| GENE 1629 1718180 - 1718803 709 207 aa, chain + ## HITS:1 COG:yadS KEGG:ns NR:ns ## COG: yadS COG2860 # Protein_GI_number: 16128150 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 207 1 207 207 312 90.0 3e-85 MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK DPTDLVVAMVTCLLTIVLVRQPRRLPKWILPVLDAVGLAVFVGIGVNKAFNAGTGPLVAI CMGVLTGVGGGIIRDILAREVPMILRTEIYATACIIGGIVHATAYYTFAVPLENAAMLGM VVTLAIRLAAIRWHLKLPTFALDENSR >gi|333596726|gb|GL892086.1| GENE 1630 1718862 - 1719206 440 114 aa, chain - ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 209 92.0 7e-55 MSDDVALPLEFTEAAAKKVKTLIADEDNPDLKLRVYITGGGCSGFQYGFTFDDQVNDGDM TIEKQGVALVVDPMSLQYLVGGSVDYTEGLEGSRFVVTNPNATSTCGCGSSFSI >gi|333596726|gb|GL892086.1| GENE 1631 1719292 - 1720692 1681 466 aa, chain - ## HITS:1 COG:STM0203 KEGG:ns NR:ns ## COG: STM0203 COG0038 # Protein_GI_number: 16763593 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 1 463 1 463 473 679 83.0 0 MNENTPSFEQQQFTRAKHRVSIRRLLNRDKTPLAILLAAAVVGTLAGLVGVAFEKAVNAV LNWRIGTVASFADREWLVWVLAFGLSALFAMVGYFLVRKFAPEAGGSGIPEIEGALEELR PVRWWRVLPVKFIGGMGTLGAGMVLGREGPTVQLGGNVGRMVGDLFRMRSAEARHTLLAT GAAAGLSAAFNAPLAGILFIIEEMRAQFRYNLISIKAVFTGVIMSSIVFRIVNGEGAVIE VGKLTNAPVNTLWLYLVLGMIFGIVGPLFNTLILRAQDMFQRIHGGNTTKWVLVGGLLGG VCGILGFIEPNAAGGGFGLIPIAAAGNFSVGLLLFMFISRVITTVLCFSSGAPGGIFAPM LALGTLLGTAFGMAAAAGFPAYHLDAGTFAVAGMGALLAASLRAPLTGIVLVLEMTDNYQ LILPMIITCLGATLLAQFLGGKPLYSTILARTLAKQEAEQALKQNT >gi|333596726|gb|GL892086.1| GENE 1632 1720870 - 1722150 1591 426 aa, chain + ## HITS:1 COG:ECs0158 KEGG:ns NR:ns ## COG: ECs0158 COG0001 # Protein_GI_number: 15829412 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 810 93.0 0 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIERADGAYLYDVDGKAYVDYVGSWG PMVLGHNHPAIRNAVIEAAQRGLSFGAPTEMEVKMAELVTELVPTMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDLNTVRAAFEQYPQEIACIIVEPVAGNMNCIPPQPDFLPGLRALCDEFGALLIIDEVM TGFRVALAGAQSYYGVEPDLTCLGKIIGGGMPVGAFGGRKDVMEALAPTGPVYQAGTLSG NPIAMAAGFACLTEVAQPGIHETLTDRTTQLANGLLEAAEDAGIPLVVNHVGGMFGIFFT EAKTVTCYQDVVKCDVERFKRFFHLMLEEGVYLAPSAFEAGFMSVAHSEEDINNTIDAAR KVFAKL >gi|333596726|gb|GL892086.1| GENE 1633 1722219 - 1724201 2439 660 aa, chain - ## HITS:1 COG:STM0194 KEGG:ns NR:ns ## COG: STM0194 COG0609 # Protein_GI_number: 16763584 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Salmonella typhimurium LT2 # 4 660 29 685 685 863 85.0 0 MSTRMARFPMLLLALIFLAALALTGFNLTTALPRDQWVAAFAAPDIDNIQQMLFHYSLLP RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITITTLWTLPGALTAQFA ALAGACVVGALVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVLFHHDQLQSMFMWST GTLTQTDWSIVQRLWPQLFGGVVLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALTLA IVLSALLVNAVGIIGFIGLFAPLLAKMLGARRLLARLMLAPLIGALILWLSDQLILWLAR VWMEVSTGSVTALIGAPLLLWLLPRLRSMSAPAMDAGDKVHAERQSVVWFSLAGLVVLII ASFAALSLGRDATGWHWATGDLLHELMQWRWPRIFSALIAGVMLAVAGCIIQRLTGNPMA SPEVLGISSGAAFGVVLMLFLVPGNAFGWLMPAGSIGAAVTLMIILIASGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQILTWISGSTYNATGSQVVHTGIVMIVLLAIVPL CRRWMTILPLGGDTARAVGVALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARM MGFRRTLPHIVISALTGGVILVFADWCGRMVLFPYQIPAGLLSTFIGAPYFIYLLRKQSR >gi|333596726|gb|GL892086.1| GENE 1634 1724198 - 1725088 933 296 aa, chain - ## HITS:1 COG:STM0193 KEGG:ns NR:ns ## COG: STM0193 COG0614 # Protein_GI_number: 16763583 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 7 296 7 296 296 445 72.0 1e-125 MLESTFISRRRLLTAMALSPLLLKMGQARAAAIDPHRIVALEWLPVELMMALGVTPYGVA DIPNYTLWVNEPKLPDSVIDIGLRTEPNLELLTQMKPSYLFWSAGYGPSEETMAKIAPGR GFSFSDGKKPLTMAKNSIHEMAQFLNREAEAKKHLDEFDALISSLKPRFAHRGDRPLLMV TLLDARHMLVFGKNCLFQEVLDSFGIRNAWEGEMTFWGSTAVGIDRLAAFRDVDVLCFDH GNEREMQTLMATPLWQAMPFVRERRFLRAPAVWFYGATLSAMHFARVLDNALGGKA >gi|333596726|gb|GL892086.1| GENE 1635 1725088 - 1725885 181 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 26 236 27 247 563 74 27 2e-11 MQDNKTQSDSTFTLNNLSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRH QPPSEGDILLDDQPLASWNSKAFARKVAYLPQQLPQAEGMTVRELVAIGRYPWHGALGRF GVADREKVEEAIALVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDI AHQVDVLALVHRLSQQRGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRSET LEHIYGIPMGILPHPAGAAPVSFVY >gi|333596726|gb|GL892086.1| GENE 1636 1725936 - 1728146 2550 736 aa, chain - ## HITS:1 COG:STM0191 KEGG:ns NR:ns ## COG: STM0191 COG1629 # Protein_GI_number: 16763581 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Salmonella typhimurium LT2 # 1 736 1 729 729 882 64.0 0 MALSNTAQPINTSLRKLAAVVATAVAGMSAYAQAAETPNKEETITVTAAPAAQESAWGPA PTIAAKRTATATKTDTPIEKTPQSISVVTREEMDMKQPGTVKQALAYTPSVFATRGASTT YDVVSIRGFTTSSTVNTNQYLDGMKLQGDNYSEASMDPYFLERVELLRGPTSVLYGKSHP GGVVSMVSKRPTTEPLKEIQFKMGTDNLWQTGFDFSDAIDDDGVWSYRLTGLGRSENAQQ EMVKSTRYAIAPSFSWRPDDKTDFTFLSNFQSDPDAGYYGWLPREGTVVPYYDAAGKAHK LPTDFNEGDEDNKISRRQKMVGYSFAHEFNDTFTVRQNLRYTKINTLYRSVYGNGYIAPA QISRAYVRSDEDLNSFTVDTQLQSKFATGAVDHTLLTGVDYLRMRNDIDADYGTADPISM NNPQHGNANVNVNFPYAMLNRQEQTGLYAQDQAEWDKWVLTLGGRYDFAKTSAFNRNNGT TAEINDQAFTWRGGINYLFDNGITPYFSYSESFEPLSGTTQGGKPFDPARGKQYEAGVKY VPKDLPVVVTAAVYQLTKNNNLTADPANPTSGFSVQGGEIRSRGFELEAKAAVSANVNVT AAYSYTDAEYTHDTWYEGRRPAEVPRNMASLWADYTFHETALSGLTVGAGARYIGNTVTY YSAASPKAYESFNVAGYALADATVKYDLARFGLPGSSVGVNVNNIFDREYVSSCYSEYAC YWGAGRQVVATATFRF >gi|333596726|gb|GL892086.1| GENE 1637 1728379 - 1730901 3209 840 aa, chain - ## HITS:1 COG:STM0190 KEGG:ns NR:ns ## COG: STM0190 COG0744 # Protein_GI_number: 16763580 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Salmonella typhimurium LT2 # 1 840 1 840 840 1454 89.0 0 MAGNDREPIGRKGKPTRPAKEKVSRRRLRDEEYDDDYEDDYEDEEPMPRKGKGKGRKPRG KRGWFWLLLKLFIVFVVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMSISK NEMVKLLQATQYRQVTKMTRPGEFTVQAKSIEMIRRPFDFPDSKEGQVRARLTFDGDRLE TIENMDNDRQFGFFRLDPRLITMLSSANGEQRLFVARNGFPDLLVDTLLATEDRHFYEHD GISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMAVLMDARY SKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYN PWRNPKLALERRNLVLRLLQQQQVIDQELYDMLSARPLGVQPRGGVISPQPAFMQMVRQE LQSKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPVLKKQRKLSDLETAMVVVDRNT GEVRAMVGGAEPQYAGYNRAMQARRSIGSLAKPATYLTALSQPNLYRLNTWIADAPISLR QPNGQVWSPQNDDRQFSGQVMLVDALTRSMNVPTVNLGMALGLPAITDTWQKLGVPKDQL HPVPAMILGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGSVLYQSFPQAERAVP AQAAYMTLWTMQQVVQRGTGRQLGAKYPGLHLAGKTGTTNNNVDTWFAGIDGREVVITWV GRDNNQPTRLYGASGAMSIYQRYLANQSPVPLNLVAPEDIVDMGVDSSGNFICGGGVRSL PVWTTNPDALCQQSQPEQPTGNPFDQSSQPQQQQQQPQQQEEKKDSDGVAGWIKDMFGGN >gi|333596726|gb|GL892086.1| GENE 1638 1731046 - 1733226 2037 726 aa, chain - ## HITS:1 COG:ECs0152 KEGG:ns NR:ns ## COG: ECs0152 COG1643 # Protein_GI_number: 15829406 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 1 726 99 824 824 1088 81.0 0 MRAETCVGPSTRLEVVTEGILTRMLQNDPELTGVGLVILDEFHERSLQADLALALLLDVQ QGLRDDLRLLIMSATLDNERLRQTLPDAPMISSEGRAFPVERRYQPLPAHQRFDEAVATA TAELLRQEPGSLLLFLPGVGEIQRVQEQLASRVNSDVMLCPLYGALPLAEQRQAILPAPA GQRKVVLATNIAETSLTIEGIRLVVDSTQERVASFDPRTGLTRLLTQRISQASMVQRAGR AGRLEPGICLHLTSAEQAERAALQSTPEILQSDLSGLVMDLMQWGCPDPDQLTWLNPPPV VNLAAARTLLTQLGALEGERLTARGQKMAALGNDPRLAAMLVAAQGEDEIATAAKLAAIL EEPPRGGSSDLGQAFSRNQGNWQQRAQQLCKRLNCRGGSPDSDNIPPLLAQAFPDRIARR RGLDGRYQLANGMGAMLDSDDALTRHEWLIAPLLLQGSHSPDARILQAIAVDIDALTRAC PQLLQQSDIVEWDDAQGTLKAFRRRQIGKLTLGTKPLAKPSEEELHQAMLNGIREKGLSV LNWTPEAEQYRIRLHCAAKWLPEQGWPTVDDETLLATLEQWLLPQMSGVHSLRALKALDV KAALQNLLDWSLRQRLDSELPGHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATTPSI AEGRVPLVLELLSPAHRPLQITRDLGAFWAGSYREVQKEMKGRYPKHVWPDDPANTAPTR RTKKYS >gi|333596726|gb|GL892086.1| GENE 1639 1733549 - 1734103 320 184 aa, chain + ## HITS:1 COG:STM0188 KEGG:ns NR:ns ## COG: STM0188 COG1514 # Protein_GI_number: 16763578 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 272 78.0 2e-73 MSESKRLFFAIELPTTLQRQIVRWRASHFPADAGRPVAAANMHLTLAFLGDVSAEKQRAL SAMAGRIAQPGFTLHLDDAGQWLRSRVVWLGTRQPPRGLLQLANMLRAQAARSGCYQSPQ PFHPHITLLRDAGQATAIPPPGFHWSFQVNEFALYESVFVQGRTRYTPLQRWTLGDTLRN SDEV >gi|333596726|gb|GL892086.1| GENE 1640 1734093 - 1734797 424 234 aa, chain + ## HITS:1 COG:STM0187 KEGG:ns NR:ns ## COG: STM0187 COG1489 # Protein_GI_number: 16763577 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Salmonella typhimurium LT2 # 1 234 1 234 234 379 79.0 1e-105 MKFSPALQPATLIQRYKRFLADVITPEGETLTLHCPNTGAMTGCATPGDTVWYSTSENTK RKYPHTWEMTETQNGAFICVNTLRANQLVKEALTNGIFPELIGYGTQKSEVKYGDEGSRI DFLLQAEDRPECYIEVKSVTLAEQENGFFPDAVTLRGQKHLRELMSVAAAGKRAVLLFAV LHSAIERFSPARHIDPKYAQLLNEAQKQGVEIFAYKAELSADNMTLRSSLPIVL >gi|333596726|gb|GL892086.1| GENE 1641 1734974 - 1735429 626 151 aa, chain + ## HITS:1 COG:STM0186 KEGG:ns NR:ns ## COG: STM0186 COG1734 # Protein_GI_number: 16763576 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 151 261 100.0 3e-70 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLSHFKRILEAWRNQLRDEVDRTVT HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|333596726|gb|GL892086.1| GENE 1642 1735489 - 1736379 602 296 aa, chain + ## HITS:1 COG:yadB KEGG:ns NR:ns ## COG: yadB COG0008 # Protein_GI_number: 16128137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 285 11 295 308 488 80.0 1e-138 MSESHYIGRFAPSPSGELHFGSLIAALGSYLQARARQGKWLVRIEDIDPPREVPGAAETI LRQLEHYGLHWDGEVLWQSQRHDAYRERLAWLAEQGLSYNCTCTRARIQSVGGVYDGHCR TRHNGPENAAVRLIQRSPVMQFTDALSGTIQADERLAREDFIIHRRDGLFAYNLAVVVDD HFQGVTEIVRGADLVEPTVRQISLYQQFGWTVPDYIHLPLAVNEQGNKLSKQNHAPALPD GDPRPVLIDALRFLNQNVTQEWQELSLDELLKRAIADWSLMTVPKIQHSQMRCAEL >gi|333596726|gb|GL892086.1| GENE 1643 1736476 - 1737819 1599 447 aa, chain + ## HITS:1 COG:ECs0147 KEGG:ns NR:ns ## COG: ECs0147 COG0617 # Protein_GI_number: 15829401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 2 447 9 454 454 768 89.0 0 MANDAIAQPHMSVIPREQHNISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP KDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEAGVNDRTTSQ RGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLKDGLIRLIGTP ETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPRLATLINDVPPARLFEESLKLLQAGY GFETYNLLREYNLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDTRIHNDMRVNPAFLF AAMFWYPLLETAQRITQESGLAYYDAFALAANDVLDEGCRTLAIPKRITTLVRDIWQLQL RMSRRQGKRAWKLMEHPKFRAAFDLLSLRAEVERNQELQRLAQWWGEFQVSAPPEQKDML TDLDDEPAPRRRHRRPRKRAPRREGTA >gi|333596726|gb|GL892086.1| GENE 1644 1737816 - 1738295 193 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 4 139 122 255 278 79 35 8e-13 MTLAYIAIGSNLASPLEQVNAAVQALGEIPHSRIVALSSFYRTPPLGPQDQPDYLNAAVV LETTLDAETLLDNTQRIELQQGRVRKAERWGPRTLDLDIMLFGREVINTERLTVPHYDMK NRGFMLWPLFEVAPDLTFPDGTSLQAVLQHLNADKPARW >gi|333596726|gb|GL892086.1| GENE 1645 1738419 - 1739210 940 263 aa, chain + ## HITS:1 COG:STM0182 KEGG:ns NR:ns ## COG: STM0182 COG0413 # Protein_GI_number: 16763572 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Salmonella typhimurium LT2 # 1 263 1 263 263 501 94.0 1e-142 MKPTTISLLQKCKQEKKRFATITAYDYSFAKLFAEEGINVMLVGDSLGMTVQGHDSTLPV TVEDIAYHTRAVRRGAPACLLLSDLPFMAYATPEQAFENAATVMRAGANMVKIEGGAWLV DTVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDAAQTLFDDAVALEAAGAQLLVLE CVPVELARRITEALSIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLTEAGDMR AAVRQYIAEVESGVYPGEEHSFH >gi|333596726|gb|GL892086.1| GENE 1646 1739222 - 1740073 886 283 aa, chain + ## HITS:1 COG:STM0181 KEGG:ns NR:ns ## COG: STM0181 COG0414 # Protein_GI_number: 16763571 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Salmonella typhimurium LT2 # 1 282 1 282 284 463 82.0 1e-130 MLIIETLPLLRQHIRRARQEGKRIALVPTMGNLHDGHMKLVDEARARADIVVVSIFVNPM QFDRADDLARYPRTLQEDCEKLKKRHADIVFAPAPADIYPQGTDEATFVDVPGISTMLEG ASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGYDIEIVGVPIVRA KDGLALSSRNGYLTAEQRKIAPGLSKVMNTMAEQLLAKALSSEEIVALAEQSLNDNGLRA DDIQIRDADTLLELTESSKRAVILVAAWLGQARLIDNKVVELV >gi|333596726|gb|GL892086.1| GENE 1647 1740106 - 1740486 489 126 aa, chain + ## HITS:1 COG:STM0180 KEGG:ns NR:ns ## COG: STM0180 COG0853 # Protein_GI_number: 16763570 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 232 92.0 2e-61 MIRKMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILENEAIDIWNVNNGKRFSTYAI AAERGSKIISVNGAAAHCADVGDIVIIASFVMMSDEEARRWQPKVAYFEGDNDMKRTAKA IPVQVA >gi|333596726|gb|GL892086.1| GENE 1648 1740950 - 1741534 609 194 aa, chain + ## HITS:1 COG:no KEGG:ECL_00942 NR:ns ## KEGG: ECL_00942 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 193 1 194 195 184 59.0 2e-45 MFNKTILATAVAVMAMGSVSVMAADVGVITFDGAVTDTTCVITTNNGVDANNVTVTLPVV KKADVEKTTVDAGVGSKEFELHLSKCPDTVKKASAVFTSQQFADLSNGTLKTDPTVAGAA NNVSLALFNNTAALTDRIKVGQPGTATQTVDITAGEGTLAYRVAYVPSADWKSGTNDITS GKVSSNATFTMVYP >gi|333596726|gb|GL892086.1| GENE 1649 1741599 - 1742318 600 239 aa, chain + ## HITS:1 COG:ZecpD KEGG:ns NR:ns ## COG: ZecpD COG3121 # Protein_GI_number: 15799824 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 4 231 7 236 243 231 51.0 1e-60 MRPIKTCFTALMLSAAFCVSHSAFADIVISGTRVIYPQSAKDVTVKMENRGNKPLLVQTW LDDGRDTANPQEIKLPFIVTPPVSRVDAAKGQTVRITYLGQPLPADRETMYWFNVLEVPP KSKDVDAQNMLQLAFRTRIKMFYRPDGLKGEPAVAAGQLKWSQQGSTLTARNDSPFYVSI ARMDATIGGKKIEIEPHYVSPFATQSYSVKEAASARISKVTYISINDYGGSENHDANVN >gi|333596726|gb|GL892086.1| GENE 1650 1742377 - 1744986 2841 869 aa, chain + ## HITS:1 COG:htrE KEGG:ns NR:ns ## COG: htrE COG3188 # Protein_GI_number: 16128132 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 33 869 30 865 865 766 47.0 0 MLFRRSLLCLAICTALQTTAYAAEAPAAPSSESEEVEFNDQFLFNTGTSIDVSRFSRGNP VVPGTFKTQVTLNGQKKLLTDFTFKDNGTPRATPCFTAKLLLQAGVKEARLKEVTSEESF DDRAQESCLTLDKALPGSSWDYDPGTQELSLSVPQIYIDRRPGGYVDPSLWDDGITAGML SYDLNAWHSEGSSGSEDTVYAGLKYGLNLGPWRLRSRGMLDWDQDDGTDYSSQEVYLQRD ITALRAQMLIGDSYTRGETFNSFSLRGLRMYNDDRMLPGGISTYAPTIRGVANSNAKVTV TQGGNKIYESTVPPGAFEIDDLSTTGYGSDLIVTIEESDGSKRTFSVPYSSVSQMLRPGY SRWDIGVGELHDTGMRDKPRVGYLTGYYGLSSLFTGYAGMQYMDTGYWSGLLGLAMNTRI GAFALDVTHSDADVDGIGKLKGQSYRLSWSKLLEDTNTSFNVAAYRFSTEDFLTLNDAAS LAEDVKYRDTERNPGDTGEDVYNHFQRMKNQVQLNVSQPVRVGEEDYGSLYATGSWQDYW TESSSSSQFSVGYNNSFWLGSYSVSLQRTYDEYGEKNDSIYLSLTIPLENLLGHNKRPGG FSTVSANMNSDFKDSTSFNTSANGNTDDYRFSYSVNTSTSRANSGDLNQIGGYGNYNSPY GPLSLSASASDDNSRQYSLSYSGGMLVHSGGITLAPGSIGDTDTLALVSAPGAKGAHLTV GDGVIGSSGYAIMPYLSAYRENTVGIDISQLESDVEVKSTSTVAVPRSGAVLRVDFETDQ GRSLLLDLHRSDNSFIPLGADVLNEQGQSVGSVGQAGQAYVRGVEDSGTLRVVWGNEVNN ACTVTYRITASAQKVGLTTMLTNQTCQMQ >gi|333596726|gb|GL892086.1| GENE 1651 1745011 - 1745580 646 189 aa, chain + ## HITS:1 COG:ECs0142 KEGG:ns NR:ns ## COG: ECs0142 COG3539 # Protein_GI_number: 15829396 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 189 5 186 186 65 36.0 6e-11 MKKMMLLTPLSTLLVLALSSQAMAASLDVTFTATLRETTCDMKIEGGTGDGNNNTIPIGT GGKTSLADIVSGSDAASTTFKLKIVNCPASLAKLKTTVTGSASGYVKAGIVNAATTSPAD YMAVTVARVSAPDAPFEVNSTDDSKRLVWTTAEISSKEVPLVARLVETQAGKATTGNFSA IATFNFTYE >gi|333596726|gb|GL892086.1| GENE 1652 1745599 - 1746150 375 183 aa, chain + ## HITS:1 COG:no KEGG:ECL_00938 NR:ns ## KEGG: ECL_00938 # Name: not_defined # Def: putative fimbrial protein # Organism: E.cloacae # Pathway: not_defined # 1 183 1 180 180 158 56.0 9e-38 MKMKPSTLIALAVSAGLFSGAASAITGTSSVKATFTSTIEAGTCTAQIQDASSKAISTLP FGDVFKSDLVAQSRSEPFKIAFSGCAGVKTATVTVQKKSCSGANADGDSFAAGNATAFEV WKGTAGNGTLLSCNTPTDQKVTISSGAAKLDLAARIVLAKGQTIDKVTTGNVSVPVTFVV TYQ >gi|333596726|gb|GL892086.1| GENE 1653 1746174 - 1746776 469 200 aa, chain + ## HITS:1 COG:no KEGG:ECL_00937 NR:ns ## KEGG: ECL_00937 # Name: not_defined # Def: putative fimbrial protein # Organism: E.cloacae # Pathway: not_defined # 26 199 22 200 201 168 49.0 1e-40 MLHNHQKVLRRFTVLAALLTWYWSAPCLSAETGMDITLNANIVENTCQVSIPDDGQVHLP TVSKYWFYNPDGSNRLMPTDAASGTLFKVRVESCGDDGASVQKLNFSFQPQSKQWPTASR QVFINETPVAEGGAENTGVVIFSKALNTNVLNADGTSSVVLDAGTGSWAKDYQFYARLQN TGTVKAGKVTSRVVVDATYN >gi|333596726|gb|GL892086.1| GENE 1654 1746798 - 1747904 544 368 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_3529 NR:ns ## KEGG: Rahaq_3529 # Name: not_defined # Def: fimbrial protein domain-containing protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 75 367 80 373 374 66 25.0 2e-09 MKQKGQIDVIALTKLLIGALCLVQSYAYANECHFGAEGEGGTSTIINGTSSTPVYFIEQL QFDHPNVIEIGGPYEAKLTPPLWSECDPGGDGKGMENITYDSFGEDVAKWPTNIPGIYYA VRVYSNNNPGAWFKTTNGKWASLGVQAPNESKDWKIQIKLYQTQEFSGNLNYSTKITPQA SKRIGGMSIGNHTDSDNLPWWFEVTTASFSIPVSASTCQTAMVNNGSNTVDFGEVMASDI RDTSFFPRKYFSLQLRGCNNVTAIQYKVTSKTADGTGAYIPNSLTSSDAATGVVAGFSKI FITNPPNGGDINDPAFVYVPLYGEGGSYVSGTNSSIDLPFEAWMGRDWATPVKPGNYRGI ATFTINYL >gi|333596726|gb|GL892086.1| GENE 1655 1747906 - 1749204 1139 432 aa, chain - ## HITS:1 COG:ECs0134 KEGG:ns NR:ns ## COG: ECs0134 COG0726 # Protein_GI_number: 15829388 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli O157:H7 # 18 432 1 409 409 681 78.0 0 MSLLLQWRLIFRVDLYPMLMRLIFILLLLVSGGASASLTSQQGLPAQYMQTTEDAAIWAQ VGNAVVNVGNVRAGQILAVFPAAADYYEFRFGFGTGFIDKDHLEKVQGKQRVEDSLGDLN KPLSNQNLITWKDTPVYNAPSSGSAPFGTLSANLRYPILNKLKDRLNQTWYQIRIGNRLA WISSLDAQEDNGIPVLTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDQGYTTLTMY QLEGYVRNKMNLPAKAVVITFDDGLKSVSRYAYPVLKEYGFNATAFIISSRIKGHPQKWD PKSLQFMSVQEIKAIQDVFDIQSHTHFLHRVDGYKHPILLSRSYHVILFDFERSRRALAQ FNPRVLYVSYPFGGYDNKAIKAANDAGFHLAVTTVKGKVKPGDNPFLLKRLYILRTDSLE TMSRLISNQPQG >gi|333596726|gb|GL892086.1| GENE 1656 1749217 - 1749657 469 146 aa, chain - ## HITS:1 COG:STM0178 KEGG:ns NR:ns ## COG: STM0178 COG2893 # Protein_GI_number: 16763568 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 145 1 145 146 228 73.0 2e-60 MLGWVITCHDEEAQEMFLKLEAKFGPLAQCRAVNYWRGLSTNMLSRMMCDALHETDTGDG VIFLTDRSGAAPYRSAALMSHKHDNCEVISGISLPLLEAMYPLRATLSSAEFRHAIVAQG APGVSSLWHQQQKNPPFVLLHDLYKH >gi|333596726|gb|GL892086.1| GENE 1657 1749763 - 1750533 1214 256 aa, chain - ## HITS:1 COG:STM0173 KEGG:ns NR:ns ## COG: STM0173 COG0842 # Protein_GI_number: 16763563 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 403 92.0 1e-112 MTHLYWVALKSIWAKEINRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFTYMQ FIVPGLIMMAVITNAYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLCV GILVTAISLFFVPFQVHSWLFVALTLLLTAILFSLAGLLNAVFAKTFDDISLIPTFVLTP LTYLGGVFYSLTLLPPFWQALSHLNPIVYMISGFRFGFLGITDVPLFTTVVVLAVFIVAF YLLCWYLIQRGRGLRS >gi|333596726|gb|GL892086.1| GENE 1658 1750530 - 1751456 950 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 300 1 302 311 370 64 1e-100 MAIALELEQLKKTYPGGVQALRGIDLKVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG RVSVFGYDLQKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEALERSEKY LKQLDLWEKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK DLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKNLLSKLKSETFILDLAAKS ALPKLEGYNYRLVDTSTLEVEVLREQGINSVFSQLSAQGIQVLSMRNKANRLEELFVSLV HDKQGDKA >gi|333596726|gb|GL892086.1| GENE 1659 1751564 - 1752226 639 220 aa, chain + ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 220 1 220 220 434 95.0 1e-122 MNDIDTLISNNALWSKMLVEEDPGFFGKLAQAQNPRFLWIGCSDSRVPAERLTGLEPGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENTELGLIDNWL LHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVSIHGWA YGIHDGLLRNLEVTATNRETLEQRYRSGIANLKLKHVNHK >gi|333596726|gb|GL892086.1| GENE 1660 1752317 - 1752853 774 178 aa, chain - ## HITS:1 COG:STM0170 KEGG:ns NR:ns ## COG: STM0170 COG0634 # Protein_GI_number: 16763560 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 178 1 178 178 329 97.0 1e-90 MKHTVEVMIPEAEIKARIAELGRQITEHYKDSGSEMVLVGLLRGSFMFMADLCREVQVPH EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREP KSLAICTLLDKPERREVQVPVEFVGFSIPDEFVVGYGIDYAQRYRHLPYVGKVVMLDE >gi|333596726|gb|GL892086.1| GENE 1661 1753059 - 1755449 2819 796 aa, chain + ## HITS:1 COG:STM0169 KEGG:ns NR:ns ## COG: STM0169 COG4993 # Protein_GI_number: 16763559 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 796 1 796 796 1408 90.0 0 MAETKTKQPRLLVTLTAAFAAFCALYLLIGGVWLVAIGGSWYYPIAGLVMVGVTILLLRR KQSALWLYAALLLATMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLIVPSSGA VAGLLVALLISGGILTWAGFNDPQEIHGTLNTEATPAAAISQVADGDWPAYGRNQEGQRY SPLKQINADNVKNLKEAWVFRTGDLKMPNDPGELTNEVTPIKVGNMLYLCTAHQRLFALD AATGKEKWHFDPQLNSNPSFQHITCRGVSYHEARADNASPDVIADCPRRIMLPVNDGRLF AINAETGKLCETFANKGILNLQTNMPDTTPGLYEPTSPPIITDKTIVIAGSVTDNFSTRE TSGVIRGFDVNTGKLLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPM GVTTPDIWGGNRTPEQERYASAIVALNATTGKLAWSYQTVHHDLWDMDMPSQPTLADITV NGKTVPVIYAPAKTGNIFVLDRSNGKLVVPAPEKPVPQGAAKGDYVSKTQPFSDLSFRPK KDLSGADMWGATMFDQLVCRVMFHQLRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPN RQVAIANPMALPFVSRLIPRGPGNPMEQPKDAKGSGTEAGIQPQYGVPYGVTLNPFLSPF GLPCKQPAWGYISGLDLKTNKIVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAG NVLFIAATADNYLRAYNMTNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGT KMGDYIVAYALPDENK >gi|333596726|gb|GL892086.1| GENE 1662 1755535 - 1757094 1612 519 aa, chain - ## HITS:1 COG:ECs0127 KEGG:ns NR:ns ## COG: ECs0127 COG2132 # Protein_GI_number: 15829381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli O157:H7 # 1 519 1 516 516 891 83.0 0 MQRRDFLKYSAALGVASALPLWSRAVFAADRPALPIPELLAADARSRIQLVVQVGKTTFG QHAATTWGYNGNLLGPALQLRKGKAVTVDIHNTLAEETTLHWHGLEVPGEVDGGPQGIIK PGGKRSVTFTPDQRAATCWFHPHQHGKTGHQVAMGLAGLVLIEDDESRLLRLPKQWGIDD IPVIVQDKKFGADGQIDYQLDVMSAAVGWFGDTLLTNGAIYPQHAAPKGWLRLRLLNGCN ARSLNFATSDKRPLYVVASDGGLLPEPVKVSELPMLMGERFEVLVDISDGKPFDLVTLPV SQMGMAVAPFDKPHPVLRIQPLQITASGTLPDTLTTLPALPSLDGLTQRKLQLSMDPMLD MMGMQALMKKYGNQAMAGMHHGQMMGHMNMDHGKMGGMDHGGHGFDFHNANRINGKAFDM TTPMFAATKGQFERWVISGEGDMMLHPFHIHGTQFRILSENGKAPEAHRMGWKDTVRVEG GVSEVLVKFDHEAPKEFAYMAHCHLLEHEDTGMMLGFTV >gi|333596726|gb|GL892086.1| GENE 1663 1757279 - 1757587 346 102 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0670 NR:ns ## KEGG: Ent638_0670 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 102 52 153 153 202 99.0 5e-51 MAMCANSYALSENEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNY DSFDMKALGEDSYRDLSGIGIPTAKKCKALARDSLSLLAYVK >gi|333596726|gb|GL892086.1| GENE 1664 1757688 - 1758557 968 289 aa, chain + ## HITS:1 COG:speE KEGG:ns NR:ns ## COG: speE COG0421 # Protein_GI_number: 16128114 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Escherichia coli K12 # 1 286 1 286 288 555 91.0 1e-158 MTDKTVWQETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDE FIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVSRHQNVETITMVEIDAGVVSFCRQY LPNHNAGSYDDPRFNLVIDDGVNFVNQTTQTFDVIISDCTDPIGPGASLFTSSFYEGCKR CLNPGGIFVAQNGVCFLQQDEALDSHRKLSTYFADVSFYQAAIPTYYGGIMTFAWATDND VLRHLSTEIIQARFHQAGLQCRYYNPAIHTAAFALPQYLQDALSSKEVN >gi|333596726|gb|GL892086.1| GENE 1665 1758558 - 1759352 1072 264 aa, chain + ## HITS:1 COG:ECs0124 KEGG:ns NR:ns ## COG: ECs0124 COG1586 # Protein_GI_number: 15829378 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 509 93.0 1e-144 MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG ANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPEVVVAHLDKSHICVHTYP ESHPEGGLCTFRADIEVSTCGVISPLNALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF IDHEINSIQNFMSEDMKSLYDMMDVNVYQENIFHTKMMLKEFDLKHYMFHTRPEDLSEEE RKVITDLLWKEMREIYYGRNIPTV >gi|333596726|gb|GL892086.1| GENE 1666 1759383 - 1759745 696 120 aa, chain - ## HITS:1 COG:ECs0123 KEGG:ns NR:ns ## COG: ECs0123 COG3112 # Protein_GI_number: 15829377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 17 136 136 201 90.0 4e-52 MDYEFLRDITGVVKVRMSMGHEAVGHWFNEEVKENLALLDEVEQAAETVKGSERSWQRAG HEYTLWMDGEEVMVRANQLEFSGDEMEEGMSYYDEESLSLCGVEDFLSVVNAYRDFMKQK >gi|333596726|gb|GL892086.1| GENE 1667 1759934 - 1762552 3527 872 aa, chain - ## HITS:1 COG:STM0158 KEGG:ns NR:ns ## COG: STM0158 COG1049 # Protein_GI_number: 16763548 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Salmonella typhimurium LT2 # 8 872 1 865 865 1652 96.0 0 MRARRTVVLEEYRKHVAERAAEGIVPKPLDATQMAALVELLKNPPEGEEEFLLDLLINRV PPGVDEAAYVKAGFLAAIAKGEATSPLVTPEKAIELLGTMQGGYNIHPLIDALDNDKLAP IAAKALSSTLLMFDNFYDVEEKAKAGNVYAKQVMQSWANAEWFLNRPALAEKITVTVFKV TGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQKKGFPL AYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALP IEVDVSNLNMGDVIDVYPYKGEVRNHETNELLASFELKTDVLIDEVRAGGRIPLIIGRGL TTKAREALGLPHSDVFRQAKDVAESNRGFSLAQKMVGRACGVAGIRPGAYCEPKMTSVGS QDTTGPMTRDELKDLACLGFSSDLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLR PGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVL VRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAF ELTDASAERSAAGCTIKLNKEPIIEYLTSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLA DPQLLEADADAEYAAVIEIDLADIKEPILCAPNDPDDARLLSDVQGDKIDEVFIGSCMTN IGHFRAAGKLLDTHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCM GNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVAALIGKLPTPEEYQTFVAQV DKTAVDTYRYLNFDQLSQYTEKADGVIFQTAV >gi|333596726|gb|GL892086.1| GENE 1668 1763101 - 1763217 85 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEMRITALIVVIGLLLTALHGGWNISDITVLFVVNLGN >gi|333596726|gb|GL892086.1| GENE 1669 1763423 - 1764949 1130 508 aa, chain + ## HITS:1 COG:no KEGG:ECL_00917 NR:ns ## KEGG: ECL_00917 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 508 1 514 514 655 83.0 0 MKLPFKPHLLVLLCSAGLFAASGVMFVKSRATEPVAPAPIAQQPAAPATPAAAQPAPVVT PTYTAAQIDQWVAPIALYPDALLSQILMASTYPSNVIQAAQWSKDNPKMEGDAAIQAVAS QPWDPSVKSLVAFPQLMSLMGENPPWVQNLGDAFLAQPKDVMDSVQRLRLLAQQTGALQS TPQQTVTTVTKPAPAKTTSTTATETTTSPTVIKIESADPQVVYVPTYNPNTVYGTWPNTT YPPVYLPPSPGEQFTDSLVKGLGFSLGVATTYAIFSNIDWDDDDDWDHHHDDWDNRGGYN HNGDNNININVDNFNRISGQHLTDINRTWQHNPAYREGVPYPNNQLANRFHSTNTATGLS ATQQKPVNRDSQRQAALSQMEKSTGKTLPHTGSRDAQRLASTQQLKQISQRNNYRGYDTR PQTVKRASAPQREHHQAAVHRQEKRVSQTVQQPARLHRANALSGNDSRSANWQAQQQRGA QSRQLVTRQHQPRQLTGERAERHEFRHR >gi|333596726|gb|GL892086.1| GENE 1670 1764960 - 1765751 616 263 aa, chain + ## HITS:1 COG:no KEGG:ECL_00916 NR:ns ## KEGG: ECL_00916 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 263 1 263 263 460 85.0 1e-128 MKRQLLSGMVLFMVSATVMAQQSFSSPEQATSALASAISEQNESAMNNLLGENWRDFLPP EGVDPDAVDRFLRDWKVRHNTVVEGDTAHLVVGDSGWQLPIPVIKTASGWQFDIKEGAEE ILTREIGRNELAAIEALHAYVVAQQSYFAMNQTYAQKIVSSEGKKDGLYWPVSPGEAPSP LGPAFSPKEPGAGYHGYRFRILPDNNGFAMVAWPVSYGQSGVMSFMINQDDKVYQSNLGG ESARKAQALTMYRPDTSWQPVAP >gi|333596726|gb|GL892086.1| GENE 1671 1765868 - 1767268 320 466 aa, chain - ## HITS:1 COG:no KEGG:Pfl01_1574 NR:ns ## KEGG: Pfl01_1574 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens_PfO1 # Pathway: not_defined # 12 443 55 477 501 212 34.0 4e-53 MKSNELTSDIRDLKVMGARTQSGSCWASATHKLVALDKETLQPVSVDWWYEDETTSRFTG PVFTDTRPDVRLLANSDVYRLGDVINISNFGGSGSALAVIKNDGTVEAWGMPQNGGTSPT SDRNHNVRAVYGGWDVSAAVNANGQVFTWSVDDDNPLPDNVAALDDIVDIKVAQYFTDQG NYTYLALRANNQVVQWTDGTSHNDFPADIAERKDFIAIQTTEYAFAGITQNGHVITWGDA AYGGELPVHLKEVNDVITLYSNVGAFVALRASGSIFSWGSTRYGAVIPDNIASLTDIVSV HCTSSTFIALRQNGSVVFWGQDYSLVELPEEIASLTNIIDVQGAANSSYAFLTSEGKVYC WGSATHFEKKMPADLSDVVSLSAGWGAFAALRRDGSVVAWGHPGEGGDTTPVANELYDIR AIYACGYRFCALRNDGRLFEWGEEARTDITKMPADLQGNVTYSFVK >gi|333596726|gb|GL892086.1| GENE 1672 1767545 - 1768969 681 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 266 34 2e-69 MSTEIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIELPFIPHEDPRVWDSTDALELKTVPERLLV MGGGIIGLEMGTVYHALGSKIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA VEAKEDGIYVSMEGKKAPSEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNAKAKKK >gi|333596726|gb|GL892086.1| GENE 1673 1769145 - 1771046 1933 633 aa, chain - ## HITS:1 COG:STM0153 KEGG:ns NR:ns ## COG: STM0153 COG0508 # Protein_GI_number: 16763543 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 633 1 629 629 905 90.0 0 MAIEINVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVS VGDKTETGKLIMIFDSADGAAAAAPAQEEKKEAAPAAAAPAAAAAAKEVNVPDIGGDEVE VTEILVKVGDTVAAEQSLITVEGDKASMEVPAPFAGTVKEIKINTGDKVSTGSLIMIFEV AGAEGAAAPAKAEAAPAQAAAPAAAGGAKDVNVPDIGGDEVEVTEVMVKVGDKVAAEQSL ITVEGDKASMEVPAPFAGTVKEIKISTGDKVSTGSLIMVFEVEGAAPAAAPAAAAAPAPA AAPAQAAKPAAAPAAKAEKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILR EDVQAYVKDAVKRAEAAPAAAAGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLS RNWVMIPHVTHFDKTDITDLEAFRKQQNAEAEKRKLDVKFTPVVFIMKAVAAALEQMPRF NSSLSEDGQKLTLKKYINIGVAVDTPNGLVVPVFKDVNKKSITELSRELTTISKKARDGK LTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMMPI SLSFDHRVIDGADGARFITIINNMLSDIRRLVM >gi|333596726|gb|GL892086.1| GENE 1674 1771061 - 1773724 3041 887 aa, chain - ## HITS:1 COG:STM0152 KEGG:ns NR:ns ## COG: STM0152 COG2609 # Protein_GI_number: 16763542 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Salmonella typhimurium LT2 # 1 887 1 887 887 1768 95.0 0 MSERLQNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLSEARKGGVKVVSGAGASNY VNTIAVEDEPEYPGNLDLERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYEV CFNHFFRAANEKDGGDLVYFQGHISPGIYARAFLEGRLTEEQMNNFRQEVHGKGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSEQTVYAFLGDGEMDEPESK GAITIATREKLDNLCFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWNVIKVMWGGRWD ELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWAL NRGGHDPKKVYAALKKARETKGKATVILAHTIKGYGMGDTAEGKNIAHQVKKMNMDGVRY IRDRFNVPVTDEQVENLSYITFPEGSEEHKYLHERRQALKGYLPARQPNFTEKLELPALE DFSQLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYY SMFGFQRIGDLCWQAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PSYAYEVAVIMHDGLQRMYGEAQENIYYYITTLNENYHMPAMPAGAEEGIRKGIYKLETI EGSKGKVQLLGSGSILRHVREAAQILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP METPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIDKKVVADAITKFNIDADKVNPRLA >gi|333596726|gb|GL892086.1| GENE 1675 1773848 - 1774612 629 254 aa, chain - ## HITS:1 COG:STM0151 KEGG:ns NR:ns ## COG: STM0151 COG2186 # Protein_GI_number: 16763541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 254 1 254 254 385 92.0 1e-107 MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQNSLWQSFSDPLVELLSDHPESQFDLLETRHALEGIAAYYAALRST DEDRVRIRELHQAIERAQQSGDLDAESSAVVQYQIAVTEAAHNVVLLHLLRCMEPMLAQN VRQNFELLYARREMLPLVSNHRTRVFEAIMAGEPEQAREASHRHLAFIEEILLDRSREQS RRERSLRRIQQRKD >gi|333596726|gb|GL892086.1| GENE 1676 1775150 - 1776520 1722 456 aa, chain + ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 2 457 457 790 93.0 0 MEAQQHGDQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFL IMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW YPEIPTWASAAAFFVIINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGG PQATVRNLWEQGGFLPHGMTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV IYRILIFYVGSLAVLLSLLPWTRVTADTSPFVLIFHELGDTFVANALNVVVLTAALSVYN SCVYCNSRMLFGLAQQGNAPKALLTVDKRGVPVNTIIVSAVVTALCVLINYLAPESAFGL LMALVVSALVINWAMISLAHIKFRRAKHQQGVTTRFPALLYPLGNWVCLLFMAAVLIIML ITPGMAISVYLIPVWIAILGVGYMVKQKNAKTVKAH >gi|333596726|gb|GL892086.1| GENE 1677 1776685 - 1778082 559 465 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 5 447 8 521 522 219 30 3e-55 MNNNKLSVKEKIGYGMGDAGCNIIFGAIMLFVNYFYTDIFGLAPALVGVLLLSVRVIDAV TDPIMGAIADRTRSKYGRFRPWLLWIAFPYALFSILMFTTPEWSYNSKVIYAFVTYFLLS LTYTAINIPYCSLGGVITNDPKERVACQSYRFVMVGIATLLLSLTLLPMADWFGGDNKAK GYQMAMTVLALIGTCMFLFCFATVRERVRPAVQTHDELKNDLKDVWKNDQWVRILLLTLC NVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVVGMMFGSMLAKVLTDRWCKLKVFFW TNIVLAIFSTAFYFFDPKATVTIVVLYFLLNILHQIPSPLHWSLMADVDDYGEWKTGKRI TGISFSGNIFFLKLGLAIAGAMVGFLLSWYGYDAGAKAQSADAINGIVLLFTVIPGIGYL ITAGVVRLLKVDRETMKMIQSDLEKRRTNYRELNDYQELKAVETK >gi|333596726|gb|GL892086.1| GENE 1678 1778093 - 1779043 1008 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 6 311 5 310 314 392 58 1e-107 MQTWPNPFIEQRADPYILRHEGQYYFIASVPEYDRLAIRRADSLEGLRDAKEVVVWRKPD TGPMSQLIWAPELHHIDGKWYIYFAATHTQALDQLGMFQHRMFAIECADRDPLTGTWVEK GQIKTPFDTFALDATTFVHQGKRWYLWAQKAPDISGNSNLYLCEMENPWTLKGEPVMLSK PEFDWECRGFWVNEGPAVLFHGDKLFISYSASATDENYCMGLLWTEISADPQNPANWHKS PRPVFVTSYENRQYGPGHNSFTQTPEGDDVLVYHARNYTEIEGDPLYDPNRHTRMKLVRW DENGMPDFGIPPADTL >gi|333596726|gb|GL892086.1| GENE 1679 1779062 - 1779916 1111 284 aa, chain - ## HITS:1 COG:STM0147 KEGG:ns NR:ns ## COG: STM0147 COG3725 # Protein_GI_number: 16763537 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 457 85.0 1e-128 MTLFTMLLVMIAERLFKLGEHWHLDHRLEVLFRRIRHFSMLRTLLMTAGVMAITFLLLRS LYGLFFNVPLLVVWILLGVLCIGAGKVRLHYHAYLKAASRDDAHARGAMASELTMIHGVP PDCDEREFLRELQNALLWINFRYYLAPLFWFVVGGPWGPVLLMGYAFLRAWQTWLARYLT PHERLQSGIDAILHVLDWLPVRLVGVVYALIGHGEKALPAWFASLADRHTAQYQVLTRLA QFSLAREPHTDKVETPKAAVSMAKKTSFVVVVIVALLTIYGTLV >gi|333596726|gb|GL892086.1| GENE 1680 1779913 - 1780476 572 187 aa, chain - ## HITS:1 COG:STM0146 KEGG:ns NR:ns ## COG: STM0146 COG3023 # Protein_GI_number: 16763536 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 330 83.0 6e-91 MLLEDGWLVDARHVPSPHHDCRPEDEKPTLLVVHNISLPPGEFGGPWIDALFTGTIDPDA HPFFAEIAHLRVSAHCLIRRDGEVVQYVPFDKRAWHAGVSLYQGRERCNDFSIGIELEGT DTTPYTDAQYQKLVAVTQTLIARYPAIAENITGHSDIAPERKTDPGPAFDWSRFHAMLTT SSDKEIT >gi|333596726|gb|GL892086.1| GENE 1681 1780564 - 1781457 440 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 18 295 6 283 286 174 36 2e-41 MPPRRYNPDHRRDALLERINSDIPASVAHALKEDLGGDVSADNDITAQLLPKETRSHAVI ITREAGVFCGKRWVEEVFTQLAGNDVQVTWHVEDGDAVTVNQPLFELDGPSRVLLTGERT ALNFVQTLSGVASEVRRYVDLLAGTRTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLS DAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVETLEELDEAIKAGADIIMLDNFNT EQMREAVKRTNGQAQLEVSGNVTFDTIREFAETGVDYISVGALTKHVRALDLSMRFK >gi|333596726|gb|GL892086.1| GENE 1682 1781632 - 1782069 411 145 aa, chain + ## HITS:1 COG:ppdD KEGG:ns NR:ns ## COG: ppdD COG4969 # Protein_GI_number: 16128101 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli K12 # 1 144 1 144 146 248 80.0 2e-66 MNRQQGFTLIELMVVIGIIAILSAIGVPAYQNYLRKAALTDMLQTFIPYRTAIELCALDH GGVERCDAGTNGIPSPATTRYVSAMSVAKGTVSLTGQESLNGLEVLMTPIWSDGNGMTGW TRDCKVASDTALKQACEDVFRFDNN >gi|333596726|gb|GL892086.1| GENE 1683 1782082 - 1783461 861 459 aa, chain + ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 458 1 460 461 593 66.0 1e-169 MNTEQLMTLCQRHHALLLASDTDMISIAVVGNPASELMEALRFATQKRIDIECWTAERME KRLQSASSSHLPGIAPNSAADVLNTTLQQAVNQRASDIHIEPTEHSYQIRLRIDGVLYPQ PPISAALGTTLAARLKVLGQLDIAERRLPQDGQFTVELASVPVSFRIATLPCSGGEKIVL RLLHQVQQALELEQLGMSADQQARFAGALNSPQGLILVTGPTGSGKTVTLYSALQARNTP DVNICSVEDPVEIPLAGLNQTQINPRAGLTFQSVLRALLRQDPDIIMVGEIRDGETAEIA IKAAQTGHLVLSTLHTNSTTETLVRLQQMGVARWMISSALSMVIAQRLVRRLCPYCRQEA SRHTELPRALWPRPLPRWQPTGCDRCYHGFYGRVAIFEVLVIDDTLRQAIASGASTEVIG SSARQAGMTSLFEHGCMAVEQGLTTLEELLRILGMPDGC >gi|333596726|gb|GL892086.1| GENE 1684 1783451 - 1784635 987 394 aa, chain + ## HITS:1 COG:STM0142 KEGG:ns NR:ns ## COG: STM0142 COG1459 # Protein_GI_number: 16763532 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Salmonella typhimurium LT2 # 1 393 1 398 400 384 52.0 1e-106 MAANSLWRWRALTSGGDVQTGTLWAIDRDAAYTALVLKQLHPLALNRCQQRHRWQVQHCY DIFRQLATLLQAGLTLSQSLHMLAEQHPLHQWQALLHSLADDLSEGCALSESMKKWPDVF SPLYVSMVKTGELTGKLEACCRQLAQQQKSQQQLNAKVKKALRYPLIILTLAFFVVLAMV TLVLPEFAAIYKTFNTPLPLLTQAVMGLAALVQAHILTLLALLVVMILLACKLRRHPRWQ YVLLHVPVMGTLSRGQKLGQIFTVLSLTQQAGIAFLQGLESVEETVERGYWQDKIRGIRS DIEQGMPVWSSFQKASVFTPLCIQLIRTGEVSGSLDVMLMNLARHHTEQTFQQADNLAAL LEPLLLVVTGLIIGTLVVAMYLPIFHLGDAMSAG >gi|333596726|gb|GL892086.1| GENE 1685 1784669 - 1785712 1118 347 aa, chain - ## HITS:1 COG:ECs0108 KEGG:ns NR:ns ## COG: ECs0108 COG0516 # Protein_GI_number: 15829362 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Escherichia coli O157:H7 # 1 347 1 347 347 653 92.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQTWSGVPIIAANMDTVGTF EMATALAQFDILTAVHKHYSPEEWNAFVASAPADVVKHVMVSTGTSDADFEKTKQILNAN PALNFVCIDVANGYSEHFVQFVSKAREAWPNKTIIAGNVVTGEMCEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIISDGGCTMPGDVAKAFGGGADFVM LGGMLAGHEESGGTVVEENGEKFMLFYGMSSESAMTRHVGGVAKYRAAEGKTVKLPLRGP VENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRVFNSL >gi|333596726|gb|GL892086.1| GENE 1686 1785941 - 1786561 557 206 aa, chain + ## HITS:1 COG:ECs0107 KEGG:ns NR:ns ## COG: ECs0107 COG0237 # Protein_GI_number: 15829361 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 282 77.0 3e-76 MGYIVALTGGIGSGKSTVAHAFARLGITIIDADIIARQVVEPNTPALNAIEAHFGRRVIQ ADGTLNRRQLRECIFSDSSEKAWLNALLHPIIHQETQRQIAAARSPYVMWVVPLLVENQL HKKADRVLVIDVAPETQIQRTMTRDHVSREHAEQILAAQATREARLAVADDVIDNNGAPD AIASDVARLHAQYLTFAAQAVAQEKP >gi|333596726|gb|GL892086.1| GENE 1687 1786561 - 1787304 812 247 aa, chain + ## HITS:1 COG:STM0139 KEGG:ns NR:ns ## COG: STM0139 COG4582 # Protein_GI_number: 16763529 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 247 1 247 247 404 80.0 1e-113 MSTHILFEHPLNEKMRTWLRIEFLIQQLSQHLPVNDHATALHFFRNVGDLLDVIERGDVR TELLKDLERQQRKLQAWAEVPGVDQSRIDALRQQLKNSSTTLMAAPRVGQFLREDRLIAL VRQRLSIPGGCCSFDLPTLHMWLHMPQEQRDRQVNGWLSSLEPMNQTLSLILDLVRNSAP FRKQTSLNGFYQDNGDDADLLRLNLSLGEQLYPQISGHKSRFAIRFMPLDSEHGTVPERL DFELACC >gi|333596726|gb|GL892086.1| GENE 1688 1787314 - 1787508 140 64 aa, chain + ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 61 1 61 65 101 86.0 3e-22 MSDVTTVSCPTCGKTVVWGEVSPFRPFCCKRCQLIDLGEWAAEEKRIPSEGDLSDSDDWS ENQQ >gi|333596726|gb|GL892086.1| GENE 1689 1787543 - 1787935 361 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 2 127 4 129 136 143 51 3e-32 MKTLQIAVGIIRNPKNQIFITQRAADAHMANKWEFPGGKIESGETPEQALVRELQEEVGI TPLGATLFDKLEYQFPDRHITLWFWLVENWEGEPWGKEGQPGSWIELQASDAEKFPPANE PVILRLVAQP >gi|333596726|gb|GL892086.1| GENE 1690 1787993 - 1790698 3679 901 aa, chain - ## HITS:1 COG:STM0136 KEGG:ns NR:ns ## COG: STM0136 COG0653 # Protein_GI_number: 16763526 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Salmonella typhimurium LT2 # 1 901 1 901 901 1630 93.0 0 MLIKLLTKVFGSRNDRTLRRMRKAVNVINGMEPAMEKLSDDELKAKTAEFRARLEKGETL ESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGMTVGINMSGLPAPAKREAYNADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYRKVD KIIPHLLRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVKIEELLVAEGIMEEGESLYS PSNIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVDIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR KDMPDLVYMTEAEKIQAIIEDIRDRTANGQPVLVGTISIEKSEVVSNELTKAGIKHNVLN AKFHAKEADIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAELENPTPEQIAQIKAD WQVRHDAVLASGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY TQRNELLDVSDVSETINSIREDVFKATIDAHIPPQSLEEMWDIEGLQERLKNDFDLELPI KEWLDKEPELHEETLRERIYETALDVYKRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEAM EQQRREEAERLAQMQQLSHQTDESEAAAAIAAQTGDRKVGRNDPCPCGSGKKYKACHGRL S >gi|333596726|gb|GL892086.1| GENE 1691 1790757 - 1791191 386 144 aa, chain - ## HITS:1 COG:no KEGG:ECL_00894 NR:ns ## KEGG: ECL_00894 # Name: not_defined # Def: SecA regulator SecM # Organism: E.cloacae # Pathway: Protein export [PATH:enc03060]; Bacterial secretion system [PATH:enc03070] # 1 144 24 167 167 224 88.0 9e-58 MVAASFGLPVLSNSADAATPTRSSTTKHDLTTRVNFTNLAWLEASRRPNFSVDYWQQHAI RTVIRHLSFAMAPQTMPVAEETLPVQAQHLALLDTLNALLTQDNQPPVTVTQTAQTDFVS PASFSVSTWISQVHGIRAGPQRLS >gi|333596726|gb|GL892086.1| GENE 1692 1791540 - 1792457 971 305 aa, chain - ## HITS:1 COG:ECs0100 KEGG:ns NR:ns ## COG: ECs0100 COG0774 # Protein_GI_number: 15829354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 622 96.0 1e-178 MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFVYLLLDAGI EELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSTQRYAMNFSAD AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEYVTFEDEAELPLAFKAP TMVLA >gi|333596726|gb|GL892086.1| GENE 1693 1792559 - 1793710 1498 383 aa, chain - ## HITS:1 COG:ECs0099 KEGG:ns NR:ns ## COG: ECs0099 COG0206 # Protein_GI_number: 15829353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 627 97.0 1e-179 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GGGITKGLGAGANPEVGRNAAEEDREALRAALDGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP EMNDELRVTVVATGIGMDKRPEITLVTNKQTQQPVMDRYQQHGMAPLTQEQKPAAKVVND PTPQTAKEPDYLDIPAFLRKQAD >gi|333596726|gb|GL892086.1| GENE 1694 1793773 - 1795029 1184 418 aa, chain - ## HITS:1 COG:ECs0098 KEGG:ns NR:ns ## COG: ECs0098 COG0849 # Protein_GI_number: 15829352 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Escherichia coli O157:H7 # 1 418 1 420 420 800 97.0 0 MIKSTDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLAASYSVLTEDERELGVCVVDIGGGTMDMAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGA PLNITGLTDYAQEPYYSTAVGLLHYGKESHLSGEAEVEKRVSVGSWVKRLNTWLRKEF >gi|333596726|gb|GL892086.1| GENE 1695 1795026 - 1795868 572 280 aa, chain - ## HITS:1 COG:STM0131 KEGG:ns NR:ns ## COG: STM0131 COG1589 # Protein_GI_number: 16763521 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Salmonella typhimurium LT2 # 1 265 1 263 276 472 89.0 1e-133 MSQAALNTRNRDDEEEYSSSRRSNGTRLAGIIFLLGVLCTVFISGWMVLGWMEDAQRLPL SKLVVTGERHYTRNDDIRQSILALGSPGTFMTQDVNIIQSQIERLPWIKQASVRKQWPDE LKIHLVEYVPIARWNDQHMVDVDGNSFSVPSDRVNKQNLPMLYGPEGSENEVLQGFREMG QVLAKDRFTLKDAAMTARRSWQLTLTNGIKLNLGRGDTMKRLARFVELYPVLQQQAQADG KRISYVDLRYDSGAAVGWEPAPVEEPNQQQNQAQVQAEQQ >gi|333596726|gb|GL892086.1| GENE 1696 1795870 - 1796790 1033 306 aa, chain - ## HITS:1 COG:ddlB KEGG:ns NR:ns ## COG: ddlB COG1181 # Protein_GI_number: 16128085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli K12 # 1 305 1 305 306 514 87.0 1e-145 MADKIAVLFGGTSAEREVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTQLKAMGFDKAFI ALHGRGGEDGTLQGLLELIGMPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRR EFELGLSDSVNTRIAALGLPVIVKPSREGSSVGMSKVDKAVDLADALALAFQHDEEVLIE KWLSGPEFTVAMLGEEILPSIRIQPAGVFYDYEAKYLSDETQYFCPAGLEAAREAELQSL VLKAWNVLGCRGWGRIDVMLDGDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR ILDQAG >gi|333596726|gb|GL892086.1| GENE 1697 1796783 - 1798258 1549 491 aa, chain - ## HITS:1 COG:ECs0095 KEGG:ns NR:ns ## COG: ECs0095 COG0773 # Protein_GI_number: 15829349 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 # 1 490 1 490 491 860 94.0 0 MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQL ASLGATIYFNHRPENVSDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRH GIAVAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHSRYLIAEADESDA SFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELL PRVGRQITTYGFSEDADVRVEDYKQVGAQGHFTLARQDKELLHVTLNAPGRHNALNAAAA VAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKPGTAMLVDDYGHHPTEVD ATIKAARAGWPEKNLVMIFQPHRYTRTRDLYDDFANVLSQVDTLLMLDVYAAGETPIPGA DSRSLCRTIRGRGKVDPILVPDPAQVAEMLAPVLTGNDLILIQGAGNIGKIARTLAEIKL KPQTQEDERHG >gi|333596726|gb|GL892086.1| GENE 1698 1798318 - 1799382 1107 354 aa, chain - ## HITS:1 COG:ECs0094 KEGG:ns NR:ns ## COG: ECs0094 COG0707 # Protein_GI_number: 15829348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Escherichia coli O157:H7 # 3 354 4 355 355 600 90.0 1e-171 MNQPKRLMVMAGGTGGHVFPGLAVAHHLMEQGWQVRWLGTADRMEADLVPKHGIEIDFIR ISGLRGKGIKALLLAPVRIFNAWRQARAIMKRFKPDVVLGMGGYVSGPGGLAAWSLGIPV VLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPKADVVGNPVRVDVLALPLPDARLAGREG PVRVLVVGGSQGARILNQTMPQVAAKLGDAVTLWHQSGKGAQQTVEQAYAQEGQPQHKVT EFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAA KIFEQPQFTADAVATTLAGWNRDVLLEMAHRARATAIPDATERVAKEVSLAAQA >gi|333596726|gb|GL892086.1| GENE 1699 1799379 - 1800623 1363 414 aa, chain - ## HITS:1 COG:STM0127 KEGG:ns NR:ns ## COG: STM0127 COG0772 # Protein_GI_number: 16763517 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Salmonella typhimurium LT2 # 1 414 1 414 414 717 94.0 0 MRLSLPRLKMPRLPGFGILVWLFTALKGWVMASRDKDSDSLIMYDRTLFWLTLGLAAIGF IMVTSASMPVGQRLANDPFLFAKRDGLYIILAFCLAMITLRLPMSFWQRHSTAMLIASII MLLIVLVVGSSVNGASRWIAFGPLRIQPAEFTKLSLFCYLANYLVRKVDEVRNNLRGFLK PMGVILVLAILLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAE PYRIRRVTSFWNPWEDPFGSGYQLTQSLMAFGRGEVWGQGLGNSVQKLEYLPEAHTDFIF SIIGEELGYIGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNV GAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMFLLRIDYETRLEKAQAFTRGSR >gi|333596726|gb|GL892086.1| GENE 1700 1800623 - 1801939 1308 438 aa, chain - ## HITS:1 COG:STM0126 KEGG:ns NR:ns ## COG: STM0126 COG0771 # Protein_GI_number: 16763516 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 797 92.0 0 MADYQGKKVVIIGLGLTGLSCVDFFLARGVTPRVMDTRVSPPGLDKLPEQVERHLGGLND EWLLAADLIVASPGMALAHPSLSAAAEAGVEIVGDIELFCREAQAPIVAITGSNGKSTVT TLVGEMAKAAGKNVGVGGNIGLPALMLLDKGCELYVLELSSFQLETTSSLHAAAATILNV TEDHMDRYPFGLQQYRAAKLRVYENAKVCVVNADDALTMPVRGADDRCISFGINMGDYHL NRQQGETWLRVKGEKVLNVKEMMLSGQHNYTNALAALALADAVGLPRSSSLKALTTFTGL AHRFQLALEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSSLKQYL NGDNVRLYCFGRDGSELAALRPEVAEQTETMEQAMRLIAPRVKPGDMVLLSPACASLDQF KNFEQRGDLFTRLAKELG >gi|333596726|gb|GL892086.1| GENE 1701 1801942 - 1803024 1584 360 aa, chain - ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 645 97.0 0 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIARLQKLSFGQVVRND GPESHFSKRGTPTMGGIMILTAIVVSVLLWAYPSNPYVWCVLTVLVGYGIIGFVDDYRKV VRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATELVVPFFKDVMPQLGLFYILLA YFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFANYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVE TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|333596726|gb|GL892086.1| GENE 1702 1803018 - 1804376 1718 452 aa, chain - ## HITS:1 COG:murF KEGG:ns NR:ns ## COG: murF COG0770 # Protein_GI_number: 16128079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Escherichia coli K12 # 1 452 1 452 452 719 87.0 0 MISITLSQAAAVLQGMLHGQDLTIEAVTTDTRKVTAGCLFVALKGERFDAHDFAQQAKEN GAGALLVSRKLDIDLPQIVVKDTRLAFGELAAWVRQQVPTRVVALTGSSGKTSVKEMTAA ILSQCGNTLYTAGNLNNDIGVPMTLLRLTHEHEYAVIELGANHQGEIAWTVSLTRPEAAL VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPDDGIAIMNADNNDWLNWQSIIGSRKTWRFS PNAANSDFSATNIHVTSHGTEFTLTTPTGDIDVLLPLPGRHNIANALAAAALSMAVGASH AAIKTGLANLKAVPGRLFPIQLAENKLLLDDSYNANVGSMTAAVQVLSEMPGYRVMVVGD MAELGDESEACHVQVGEAAKAAGLDRVLSAGTLSKAISDASEVGEHFADKSALIERLKAL IAEKQIVTVLVKGSRSAAMEEVVHALQENGTC >gi|333596726|gb|GL892086.1| GENE 1703 1804373 - 1805788 1512 471 aa, chain - ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 471 25 495 495 812 91.0 0 MVLDSRVAASGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPV IYLSQLNERLSALAGRFYNEPSDQLKLVGVTGTNGKTTTTQLMAQWAQLLGETGAVMGTV GNGLLGKVSPTENTTGSAVDVQRVLAGLAEQGATFTAMEVSSHGLVQHRVAALKFAASVF TNLSRDHLDYHGDMEHYEAAKWLLYSTHHHGQAIINADDEVGRRWLEKLPDAVAVSMEDR INPNCRGRWLKAVEVNYHDSGATIRFASTWGEGEIESRLMGAFNVSNLLLALATLLALGY PMADLLKTAERLQPVCGRMEVFSAPGKPTVVVDYAHTPDALEKALEAARLHCAGKLWCVF GCGGDRDKGKRPLMGAIAEQFADIPVVTDDNPRTEEPRAIINDILAGMLDAGRARVVEGR AEAVTNAIMQAQENDVVLLAGKGHEDYQIVGNRRLDYSDRVTAARLLGVVA >gi|333596726|gb|GL892086.1| GENE 1704 1805847 - 1807613 1470 588 aa, chain - ## HITS:1 COG:STM0122 KEGG:ns NR:ns ## COG: STM0122 COG0768 # Protein_GI_number: 16763512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 1 588 1 588 588 1114 95.0 0 MKAAAKTLKPKRQEEQANFVSWRFALLCGCILLALGFLLGRVAWLQIIAPDMLVRQGDMR SLRVQEVSTSRGMITDRSGRPLAVSVPVKAIWADPKELHDAGGITLDNRWKALSDALKMP LDQLASRVNANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIG FTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERL QALVYRELNNAVAFNKAESGSAVLVDVATGEVLAMASSPSYNPNNFAGTAKDAMRNRSIT DVFEPGSTVKPMVVMTALQRGIVNENTVLNTIPYRINGHEIKDVARYSELTLTGVLQKSS NVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYG LMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGG GVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASNPRFALVVVINDPQAGKY YGGAVSAPVFGAIMGGVLRTMNIEPDALATGEKSEFVINQGEGTGGRS >gi|333596726|gb|GL892086.1| GENE 1705 1807629 - 1807994 230 121 aa, chain - ## HITS:1 COG:STM0121 KEGG:ns NR:ns ## COG: STM0121 COG3116 # Protein_GI_number: 16763511 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 121 1 121 121 216 95.0 6e-57 MISRVTETLSKVKGSLGSNERHALPGVIGDDLLRFGKLPLCLFICIIVTAVMVVTTAHHT RLLTAQREQMVLERDALDIEWRNLILEENALGDHSRVERIATEKLQLQHVDPSQENIVVQ K >gi|333596726|gb|GL892086.1| GENE 1706 1807991 - 1808932 779 313 aa, chain - ## HITS:1 COG:ECs0086 KEGG:ns NR:ns ## COG: ECs0086 COG0275 # Protein_GI_number: 15829340 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 564 93.0 1e-161 MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGAEGRLLAIDRDPQA IAVAQTIDDPRFSIVHGPFSALADYVAERGLTGKIDGILLDLGVSSPQLDDAERGFSFMR DGPLDMRMDPTRGQSAAEWLQTADEADIAWVIKTFGEERFGKRIARAIVERNRVEPMTRT KELAEVIAAATPVKDKHKHPATRTFQAVRIWVNSELEEIELALKSSLDVLAPGGRLSIIS FHSLEDRIVKRFMREQSRGPQVPAGLPMTEEQLRKLGGRQLRALGKLMPGEEEVAENPRA RSSVLRIAERTNA >gi|333596726|gb|GL892086.1| GENE 1707 1808935 - 1809393 313 152 aa, chain - ## HITS:1 COG:STM0119 KEGG:ns NR:ns ## COG: STM0119 COG2001 # Protein_GI_number: 16763509 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 152 1 152 152 273 91.0 7e-74 MFRGATLVNLDSKGRLSVPTRYRDQLIENASGQLVCTIDINSPCLLLYPLPEWEIIEQKL SRLSSMNPQERRVQRLLLGHASECQMDSAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW DETTWYQQVKEDIDAEQSDSATLSERLRDLSL >gi|333596726|gb|GL892086.1| GENE 1708 1809985 - 1810989 1115 334 aa, chain - ## HITS:1 COG:ECs0084 KEGG:ns NR:ns ## COG: ECs0084 COG1609 # Protein_GI_number: 15829338 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 333 1 333 334 647 98.0 0 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAAELRTFPAE TVLYLGALPELSVSFLREQGFRTAWKDDPRDVHYLYANSYEREAAAQLFEKWLETHPMPQ ALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV LEIVLASLDEPRKPKPGLTRIKRNLYRRGILSRH >gi|333596726|gb|GL892086.1| GENE 1709 1811164 - 1811658 518 164 aa, chain - ## HITS:1 COG:STM0117 KEGG:ns NR:ns ## COG: STM0117 COG0440 # Protein_GI_number: 16763507 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Salmonella typhimurium LT2 # 1 163 1 163 163 273 95.0 8e-74 MRRILSVLLENESGALSRVIGLFAQRGYNIESLTVAPTDDPTLSRMTIQTVGDAKVLEQI EKQLHKLVDVLRVSELGQGAYVEREVMLVKIQASGYGREEVKRNTDIFRGQIIDVTPSIY TVQLAGTSDKLDAFLASVRDVAKIVEVARSGVVGLSRGDKIMRE >gi|333596726|gb|GL892086.1| GENE 1710 1811660 - 1813384 1870 574 aa, chain - ## HITS:1 COG:ZilvI KEGG:ns NR:ns ## COG: ZilvI COG0028 # Protein_GI_number: 15799761 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 EDL933 # 1 574 29 602 602 1095 91.0 0 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADG LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVILSGQVATSLIGYDAFQECDMVG ISRPVVKHSFLVKQTEDIPGVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYLWPESV SMRSYNPTTQGHKGQIKRALQTLLAAKKPVVYVGGGAVNAACETQLRELIEKLNLPVASS LMGLGAFPATHRQALGMLGMHGTYEANMTMHNSDVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVPADVPIVGDARQVLDQMLDLLAQETASQPLDEIRDWWQQIEQWRGR QCLKYDTQSENIKPQAVIETIWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKLALPDETVICVTGDGSIQMNIQELSTALQYELPVLVLNLNNGYLGM VKQWQDMIYSGRHSQSYMKSLPDFVRLAEAYGHIGMRVTDPSELEAKLGEALEHVKNNRL VFMDVIVDGTEHVYPMHIRGGGMDEMWLSKTERT >gi|333596726|gb|GL892086.1| GENE 1711 1813761 - 1814705 326 314 aa, chain - ## HITS:1 COG:STM0115 KEGG:ns NR:ns ## COG: STM0115 COG0583 # Protein_GI_number: 16763505 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 314 1 314 314 550 85.0 1e-156 MPENNINQPQAYDGVKPQLRTVDLNLLTVFDAVMQEQNITRAAQSLGMSQPAVSNAVARL KVMFNDELFVRYGRGIQPTARAFQLFGSIRQALQLVQNELPGSGFEPLSSERVFHLCVCS PLDNYLTSVIYNKVEQIAPNIHLVFKSSLNQNTEHQLRYQETEFVLGYEEFRRPEFACVP LFKDEMVLVASKKHPRMNSPLRESDVYSEQHAVVALDRYASFSQPWYDTADKQASVAYQG MAMVSVLNVVSQTQLVAIAPRWLAEEFSESLSLQILPLPLKLNSRTCYLSWHEAAGRDKG HQWMEELLINICRR >gi|333596726|gb|GL892086.1| GENE 1712 1815512 - 1817083 1886 523 aa, chain + ## HITS:1 COG:STM0113 KEGG:ns NR:ns ## COG: STM0113 COG0119 # Protein_GI_number: 16763503 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Salmonella typhimurium LT2 # 1 523 1 523 523 973 94.0 0 MSQQVVIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQT IARTIKNSRVCGLARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIE RAVYMVKRARNYTDDVEFSCEDAGRTPIEDLARVVEAAINAGARTINIPDTVGYTMPFEF SNIITGLYDRVPNIDKAIISVHTHDDLGLAVGNAIAAVHAGARQVEGAMNGIGERAGNCS LEEVIMAIKVRKDIMNVHTRINHHEIWRTSQTVSQICNMPIPANKAIVGTGAFAHSSGIH QDGVLKNRENYEIMTPESIGLNQVQLNLTSRSGRAAVKHRMEEMGYQDSDYNMDQLYDAF LKLADKKGQVFDYDLEALAFINKQQEEPEHFRLDYFTVQSGSGDIATASVKLACGDEIKA EAANGNGPVDAIYQAINRVTEYDVELVKYDLTAKGHGKDALGQVDIVVNYNGRRFHGVGL ATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQNKENNKETV >gi|333596726|gb|GL892086.1| GENE 1713 1817083 - 1818174 1328 363 aa, chain + ## HITS:1 COG:STM0112 KEGG:ns NR:ns ## COG: STM0112 COG0473 # Protein_GI_number: 16763502 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 363 1 363 363 693 93.0 0 MSKNYHIAVLPGDGIGPEVMAQALKVLEAVRSRFAMKITTSHYDVGGIAIDNHGTPLPKG TVEGCENADAVLFGSVGGPKWEHLPPAGQPERGALLPLRKHFKLFSNLRPAKLYPGLEEF CPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQHEKAFDTEVYHRFEIERIAHIAF ESARKRRRKVTSIDKANVLQSSILWREIVSEIAKQYPDVELSHMYIDNATMQLIKDPSQF DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKNIANPIA QILSLALLLRYSLDAGDAATAIENAINRALEEGVRTGDLTRGTAAVSTDEMGDIIARYVA EGV >gi|333596726|gb|GL892086.1| GENE 1714 1818177 - 1819577 1727 466 aa, chain + ## HITS:1 COG:leuC KEGG:ns NR:ns ## COG: leuC COG0065 # Protein_GI_number: 16128066 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Escherichia coli K12 # 1 466 1 466 466 892 95.0 0 MAKTLYEKLFDAHVVYEAPDETPLLYIDRHLVHEVTSPQAFDGLRAHKRPVRQPGKTFAT MDHNVSTQTKDINASGEMARIQMQELIKNCNEFGVELYDLNHPYQGIVHVMGPEQGITLP GMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVKGKAAPGITA KDIVLAIIGKTGSAGGTGHVVEFCGDAIQALSMEGRMTLCNMAIEMGAKAGLVAPDETTF NYVKGRLHAPKGQDFDDAVAYWKTLKTDEGAIFDTVVTLQAEEIAPQVTWGTNPGQVISV NDSIPDPASFADPVERASAEKALAYMGLKPGVPLTDVSIDKVFIGSCTNSRIEDLRAAAE IAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRSLK >gi|333596726|gb|GL892086.1| GENE 1715 1819588 - 1820193 806 201 aa, chain + ## HITS:1 COG:STM0110 KEGG:ns NR:ns ## COG: STM0110 COG0066 # Protein_GI_number: 16763500 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Salmonella typhimurium LT2 # 1 200 1 200 201 386 93.0 1e-107 MAEKFTQHTGRVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDDKGEVPDPE FVLNFPEYKGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLL PVTLSDEQVDELFALVQANPGISFEVDLEAEVVKAGDKTYSFSIDAFRRHCMLNGLDSIG LTLQHEDAISAYEKKQPAFMG >gi|333596726|gb|GL892086.1| GENE 1716 1820286 - 1820438 170 50 aa, chain - ## HITS:1 COG:no KEGG:ECL_00868 NR:ns ## KEGG: ECL_00868 # Name: not_defined # Def: small toxic polypeptide # Organism: E.cloacae # Pathway: not_defined # 1 50 1 50 50 82 100.0 7e-15 MPKRTLLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR >gi|333596726|gb|GL892086.1| GENE 1717 1820655 - 1821833 1423 392 aa, chain - ## HITS:1 COG:setA KEGG:ns NR:ns ## COG: setA COG0477 # Protein_GI_number: 16128064 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 594 86.0 1e-169 MLWLMTMGRRLNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWVGLFYTVNAI AGILVSLGLAKRSDSQGDRRKLILFCCAMAVGNALLFAFNRHYLTLITCGVLLASLANTA MPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTAMFTIAAGI FAISLALIAFALPSVARVEQTMDKPITQVSGWQDKNVRLLFIASTLMWTCNTMYIIDMPL WISSDLGLPDKLAGILMGTAAGLEIPAMILAGYYVKRLGKRRMMIVAVAAGVLFYAGLIL FHSREALLALQLFNAVFIGIVAGIGMLWFQDLMPGRAGSATTLFTNSISTGVILAGVIQG ALSQSYGHASVYWVIAAISVVTLMLTCRVKDV >gi|333596726|gb|GL892086.1| GENE 1718 1822194 - 1823849 1466 551 aa, chain + ## HITS:1 COG:STM0109 KEGG:ns NR:ns ## COG: STM0109 COG4533 # Protein_GI_number: 16763499 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 551 1 552 552 918 81.0 0 MPSGRLQQQFIRLWQCCEGQSQETTLNELAELLNCSRRHMRTLLNTMQQQGWLNWEAEAG RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAAVRQMLVSHLGRSFRQGRH ILRVLYYRPMKNLLPGTALRRSETHMARQIFSGLTRINEENGELEADIAHHWQQLSPLHW RFFLRPGIHFHHGRELEMRDVIDSLTRARTLPLYSHIAQIHSPTAWTLDIELSQPDKWLP WLLGYVPSMILPAEWRSLNNFSSLPIGTGPYAVSRNNNNQLKIRAFDDYFGYRALIDEVN VWVLPDLNEELSAGLTLEGPTAGEKAFESRLEEGCYYLLFDSRSHRGANHDVRKWISHIL APANLIYHAEEQYQTWWFPAYGLLPRWHHAQPVRSEKPAGLETITLSYYRDHIEHRFIAK IMSTLLAAEGVTLAIQEVDYDEWHRGDVVSDIWLNSANFTLPLDFSLFSHLYEVPLIQHC INRDWQQDAARWRAGEMDLAAWCQELLAGQTIVPLIHHWLLIQGQRSMRGLRMNTLGWFD FKSAWFAPPEP >gi|333596726|gb|GL892086.1| GENE 1719 1824018 - 1825001 1122 327 aa, chain + ## HITS:1 COG:STM0108 KEGG:ns NR:ns ## COG: STM0108 COG4143 # Protein_GI_number: 16763498 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 19 327 19 327 327 568 92.0 1e-162 MLKNVLPLLSLFALPVFAKPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDG VSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTRLFAKSGVAADAVNVPGGWKNDTFVPF DYGYFAFVYDKNKLKNPPKSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKTP EAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYVAANFAEGH YLQVEVAARTAASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVTDVALPAGFEQLNKPQ TSLEFTPQQVAAQRAAWISEWQRAVSR >gi|333596726|gb|GL892086.1| GENE 1720 1824977 - 1826587 1914 536 aa, chain + ## HITS:1 COG:ECs0071 KEGG:ns NR:ns ## COG: ECs0071 COG1178 # Protein_GI_number: 15829325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Escherichia coli O157:H7 # 1 536 1 536 536 780 84.0 0 MATRRQPLIPGWLVPGLLAAILMVVVSLGAFLALWFNAPESDLLALWHDSYLWHVIRFSF WQAFLSALLSTIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGW LASLFSLLGLEWTFSPYGLKGILLAHIFFNMPMATRLFLQALENIPGEQRQIAAQLGMRG WSFFRFVEWPWLRRQIAPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDP GRAALLAIVQMVCCLALVLLSQRLSKAIPAGSNNVTGWRDPQDSLHSRVSDFMLIALALL LLLPPLLAVIVDGLNRNVVSVLQQPVLWQATWTSLRIALAAGLLCVILTMMLLWSSRELY ARHARKAGQALELTGMLILAMPGIVLATGFFLLFNSTLGLPESADGIVIFTNALMAIPYA LKVLENPMRDANSRYSLLCQSLGIMGWRRLKVVELRALKRPLAQALAFACVLSIGDFGVV ALFGNEDFRTLPFWLYQQIGSYRSQDGAVTALLLLLLCFALFTVIEKLPGRDVKTD >gi|333596726|gb|GL892086.1| GENE 1721 1826571 - 1827272 302 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 217 22 226 245 120 38 2e-25 MLKLTDVTWLYEHLPMRFTLSVRQGERIAVLGPSGAGKSTLLNLIAGFLQPASGSIVIDN GEYTYAPPAKRPVSMLFQENNLFNHLTVWQNIALGMDPGLKLNAAQRQKLEAIAGQMGLS AFIPRLPGELSGGQRQRVALARCLVREQPLLLLDEPFSALDPALRQEMLSLVEEVCKREQ LTMLMVSHSIEDAARIAPRSVVIAEGRILWDGETEELLSGNAGASSLLGIRAV >gi|333596726|gb|GL892086.1| GENE 1722 1827316 - 1828083 906 255 aa, chain - ## HITS:1 COG:STM0105 KEGG:ns NR:ns ## COG: STM0105 COG0586 # Protein_GI_number: 16763495 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 253 1 253 255 387 85.0 1e-107 MQALLEHFITQSVMYSLIAVALVAFLESLALVGLILPGTVMMAGLGALIGSGEVNFWQAW MAGIIGCLLGDWISFWLGWRFKKPLHRWSFMKKNKALLDKTEHALHQHSMFTILVGRFVG PTRPLVPMVAGMLDLPVAKFVVPNIIGCVFWPPFYFLPGILAGAAIDIPDGMQSGEFKWL LLATAVLLWLAVWLCWRLWRSAKASVDRLTRYLPRTRLLWLAPLMLGVAVVALVALIRHP LMPVYGEILLKVVSR >gi|333596726|gb|GL892086.1| GENE 1723 1828202 - 1829047 903 281 aa, chain - ## HITS:1 COG:ECs0068 KEGG:ns NR:ns ## COG: ECs0068 COG2207 # Protein_GI_number: 15829322 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 281 1 281 292 536 86.0 1e-152 MAEPQNDPLLPGYSFNAHLVAGLTPIEAEGYLDFYVDRPLGMKGYILNLTVRGEGVIKNG DQQFICRPGDMLLFPPGEIHHYGRHPDAKEWYHQWVYFRPRAYWQEWLSWPAIFAHTGFY RPDEAHLAQFRELFAQIIEAGQAGGRYAELLAINLLEQVLLRRMEAINESLNPPLDNRVR DACQYISDHLADSQFDIASVAQHVCLSPSRLSHLFRQQLGVSVLSWREDQRISQAKLLLS TTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE >gi|333596726|gb|GL892086.1| GENE 1724 1829386 - 1831095 1863 569 aa, chain + ## HITS:1 COG:ECs0067 KEGG:ns NR:ns ## COG: ECs0067 COG1069 # Protein_GI_number: 15829321 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Escherichia coli O157:H7 # 1 554 1 554 566 997 88.0 0 MAIAIGLDFGSDSVRALAVDCTTGLEIATSVEWYPRWQEGRYCDAPNNQFRHHPRDYIES MEAAIKTVLAELTDAQRADVVGIGVDSTGSTPAPVDAEGRVLALRPEFADNPNAMFVLWK DHTAVEEAEAITRLCHQPGKTDYSRYIGGIYSSEWFWAKILHVTRADASVAQAAASWIEL CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPAAFFDELDPIINKNLTYPLFT DTFTADIPVGTLCEEWATRLGLPQNVTISGGAFDCHMGAVGAGAQPNTLVKVIGTSTCDI LTADKTSVGDRAVKGICGQVDGSVVPDFIGLEAGQSAFGDIYAWFGRVLGWPLDQLAVAH PELKTQITASKKQLLPQLTEAWAKNPSLDHLPVVLDWFNGRRTPFANQRLKGVITDLNLA TDAPALFGGLIAATAFGARAIMECFIDQGIDVNNVMALGGIARKNPVIMQACCDVLNRPL QIVASDQCCALGAAIFAAVAAGVHADIPTAQQHMASAVESTLQPQTQQAQRFEQLYQRYQ QWAKSAELHYLPVAAPAKSTADTTATLTH >gi|333596726|gb|GL892086.1| GENE 1725 1831106 - 1832608 2126 500 aa, chain + ## HITS:1 COG:araA KEGG:ns NR:ns ## COG: araA COG2160 # Protein_GI_number: 16128056 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Escherichia coli K12 # 1 500 1 500 500 988 92.0 0 MTIFNNYEVWFVIGSQHLYGPEALQQVTKHAEHVVNALNAEAKLPCKLVLKPLGTTPDEI TNICRDANYDDKCAGLVVWLHTFSPAKMWINGLAILNKPLLQFHTQFNASLPWDSIDMDF MNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDGQAQKRIGSWMRQAVSKQDTRHLKVVR FGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNDISDGDVNALVDEYESSYRLT PAAQVNGDKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQG YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFENGNDLVLGSHMLEVCPSIAV EEKPILDVQYLGIGGKADPARLIFNTRTGPAINASLIDLGDRFRLLVNCVDAVETPHSLP KLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALDLNDMRQFAELHDIELTVIDNDT RLPAFKDALRWNEVYYGTKR >gi|333596726|gb|GL892086.1| GENE 1726 1832697 - 1833392 968 231 aa, chain + ## HITS:1 COG:araD KEGG:ns NR:ns ## COG: araD COG0235 # Protein_GI_number: 16128055 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 463 96.0 1e-130 MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGLFVIKPSGVDYTVMTAEDMVVVS IETGEVVEGNKKPSSDTPTHRLLYQAFPTIGGIVHTHSRHATIWAQAGQSIPATGTTHAD YFYGTIPCTRLMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNA EDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ >gi|333596726|gb|GL892086.1| GENE 1727 1833509 - 1835866 2294 785 aa, chain + ## HITS:1 COG:polB KEGG:ns NR:ns ## COG: polB COG0417 # Protein_GI_number: 16128054 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Escherichia coli K12 # 4 785 2 783 783 1431 86.0 0 MAQAQEGFLLTRHWRDTPQGTEVAFWLATDNGPLHVTLPPQESVAFIPEHHVEKVKQLLH GENGWRLTPLELKDFHRQPVHGLYCRAHRQLMRYEKLLRDAGVTLYEADIRPPERFLMER FITAPVWVDGTAQNSSLVNARLKPNPNYRPPLKWVSLDIETTRHGELYCIGLEGCGQRVV YMLGPPNGDASALDFHLEYVNSRPQLLEKLNQWFAEHDPDVLIGWNVVQFDLRVLQKHAE RYRIPLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFSLEAVAQ ELLGEGKSIDNPWDRMDEIDRRFNEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATV NGLAVDRHGGSVAAFSHLYFPRMHRAGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVL DYKSLYPSIIRTFLIDPVGLVEGMAQPDDAHSTEGFLGARFSREKHCLPEIVGNIWHGRD EAKRHGNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHDIMRQTKALIESRG YDVIYGDTDSTFVWLKAAHSEDDAAQIGKELVAFVNAWWQEQLQKERLTSALELEFETHF ARFLMPTIRGTDQGSKKRYAGLIQEGNTQRMVFKGLETVRTDWTPLAQQFQQTLYLRVFR NEPYQDYVRDTIASLMAGELDAQLVYRKRLRRPLAEYQRNVPPPVRAARLADEENVRRGR APQYQNRGTIKYVWTTNGPEPVDYQQSPFDYDHYLTRQLQPVAEGILPFIDDDFATLVTG QLGLF >gi|333596726|gb|GL892086.1| GENE 1728 1835994 - 1838900 3696 968 aa, chain + ## HITS:1 COG:STM0096 KEGG:ns NR:ns ## COG: STM0096 COG0553 # Protein_GI_number: 16763486 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Salmonella typhimurium LT2 # 1 968 1 968 968 1796 91.0 0 MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT VTSHEGWQLKVEDVKEENGLLAYIGTRLDTDETNVILREVLLDSKLVFSKPQDRLFAGQI DRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH DADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEDAPSREYMAIE QLVERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQKNYRPVADAVALLL AGNRLSNDELNTLSDLIGEQDIEPLLQAANSDSDNAGSARKELIDMLMDRHGTSRVLFRN TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGTRKSAEDRARDMLYPEQIYQEFEGD TGTWWNFDPRVEWLMGYLTAHRSRKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI VERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDQVHADLIGYLAAPENT EGFDELIKSCREKHDALKAQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLISFSM NLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP VRLLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQAEKAAR ALIDAARSEAGEKLSAERSRLEALKAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL RLIVVTHQ >gi|333596726|gb|GL892086.1| GENE 1729 1838913 - 1839572 227 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 16 216 83 279 285 92 31 9e-17 MIMEPYNPPMDPWLVILYQDEHIMVVNKPSGLLSVPGRLDEHKDSVMTRIQRDYPEAESV HRLDMATSGVIVVALNKTAERELKRQFREREPKKQYVARVWGHPAQAEGLVDLPLICDWP NRPKQKVCYETGKAAQTEYEVLEYAPDNTARVLLKPITGRSHQLRVHMLALGHPILGDRF YAPPEALALAPRLQLHAQTLTITHPAFGNAMTFKAPVDF >gi|333596726|gb|GL892086.1| GENE 1730 1839604 - 1840419 912 271 aa, chain - ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 1 271 1 270 270 491 90.0 1e-139 MQYWGKIIGVAFAIIMGAGFWGVVLGLIIGHMFDKARSRKMAWFANQRERQSLFFSTTFE VMGHLTKSKGRVTEADIQVASVFMDRMNLHGESRIAAQNAFRIGKSDHYPLREKMRQFRS ICFGRFDLIRMFLEIQIQAAFADGSLHPNERDVLYVIAEELGISRMQFDQFLRMMQGGAH FGGGYQHQSSGGGWQQAQRGPTLEDACNVLGVKPSDDATTIKRAYRKLMSEHHPDKLVAK GLPPEMMEMAKQKAQEIQKAYELIKEQKGFK >gi|333596726|gb|GL892086.1| GENE 1731 1840659 - 1843010 2452 783 aa, chain + ## HITS:1 COG:STM0093 KEGG:ns NR:ns ## COG: STM0093 COG1452 # Protein_GI_number: 16763483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Salmonella typhimurium LT2 # 1 783 1 786 786 1345 83.0 0 MKKRIPTLLATMIGTALYSQQGLAADLASQCMLGVPSYNRPLVKGDTNDLPVTINADSAK GNYPDNATFTGNVDINQGNSRLLADEVQLHQKQPEGAQAPVRTVDALGNVHYDDNQVILK GPKAWSNLNTKDTNVWEGDYQMVGRQGRGTADLMKQRGENRYTILENGTFTSCLPGSNTW SVVGSEVIHDREEQVAEIWNARFKLGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTSNY FEFYLPYYWNIAPNMDATITPHYIHKRGNIMWENEFRYLTKAGAGLMEFDYLPSDKVFQD EHPSEGDKHRWMYYWKHAGVLDQVWRFNIDYTKVSDPYYFNDFDSKYGSSTDGYATQKFS VGYAIENFDATVSTKQFQVFDTQSRSTYGAEPQLDVNWYQNDVGPFDTRVYAQAVHFVNT NSDMPESTRLHIEPTINLPWSNDWASLNTEAKVMATHYQQKNLDWYNKRYGTDLEESVNR TLPQFKMDGKLIFERDMALLADGYTQTLEPRMQYLYVPYRDQSKIQNYDSSFLQSDYSGL FRDRTYGGLDRIASANQLTTGVTTRVYDDAAVERFNVSVGQIYYFTESRTGDDDINWEKD NKTGSLVWAGDTYWRMTDRWGLRGGVQYDTRLDNIATGSAAIEYRRDEDRMLQLTYRYAS PEYIQATLPNYANTDQYKDGISQVGTAASWPIADRWSVVGAYYYDTNAQKPADQMLGLQY NSCCYAIRVGYERKLNGWDTQNSQGKYDNVIGFNIELRGLSSNYGLGTQQMLRSNILPYR SSL >gi|333596726|gb|GL892086.1| GENE 1732 1843064 - 1844350 1402 428 aa, chain + ## HITS:1 COG:ECs0058 KEGG:ns NR:ns ## COG: ECs0058 COG0760 # Protein_GI_number: 15829312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 708 89.0 0 MKNWKTLLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGQAGQQL PDDATLRHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNITPDQMRSRLAY DGISYATYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHIL IPLPENPTSDQAAAAESQARAIVEQARNGDDFGKLAITYSADQQALKGGQMGWGRIQELP SLFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTD DQARAKLEQIAADIKSGKTTFDKAAKEFSQDPGSANQGGDLGWAAADIYDPAFRDALMKL NKGQMSAPVHSSFGWHLIQLMDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRAS AYVKVLSN >gi|333596726|gb|GL892086.1| GENE 1733 1844350 - 1845336 450 328 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 6 323 9 326 346 177 33 1e-42 MKPHRVVITPGEPAGIGPDLVVQLAQRSWPVELVVCADATLLQDRAALLGLPLTLLPYVE GQQPAPQQAGTLTLLSVPLRAPVVPGELHTENGHYVVETLARACDGCLQGEFAALITGPV HKGVINDAGIPFTGHTEFFEERSHSPKVVMMLATEAMRVALVTTHLPIKAIPDAITPDLL REIIGILHHDLQTKFGIPQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMHLS GPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTAL DLAGQGKADVGSFITALNLAIKMIVNTQ >gi|333596726|gb|GL892086.1| GENE 1734 1845333 - 1846154 923 273 aa, chain + ## HITS:1 COG:ksgA KEGG:ns NR:ns ## COG: ksgA COG0030 # Protein_GI_number: 16128045 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Escherichia coli K12 # 1 273 1 273 273 506 92.0 1e-143 MTNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD ELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNIST PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSA FTPPPKVDSAVVRLVPHKTMPYPVKDLRVLSRITTEAFNQRRKTIRNSLGNLFTVDVLAE LGIDPAMRAENISVEQYCKLANYISANAPPKES >gi|333596726|gb|GL892086.1| GENE 1735 1846158 - 1846535 462 125 aa, chain + ## HITS:1 COG:STM0089 KEGG:ns NR:ns ## COG: STM0089 COG2967 # Protein_GI_number: 16763479 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Salmonella typhimurium LT2 # 1 125 1 125 125 218 86.0 3e-57 MIDSPRVCVQVQSVYIESQSTPDEERFVFAYTVTIRNLGRMPVQLLGRYWLITNGNGREI EVQGEGVVGEQPHIAPGEEYQYTSGAVIETPLGTMQGHYEMVDADGNAFRIAIPVFRLAV PTLIH >gi|333596726|gb|GL892086.1| GENE 1736 1846540 - 1847388 1038 282 aa, chain + ## HITS:1 COG:STM0088 KEGG:ns NR:ns ## COG: STM0088 COG0639 # Protein_GI_number: 16763478 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Salmonella typhimurium LT2 # 1 280 1 280 282 541 89.0 1e-154 MSTYLIGDVHGCYDELIALLKQVDFTPGQDTLWLTGDLVARGPGSLDVLRYVKSLGDSVR MVLGNHDLHLLAVYAGISRNKPKDRITPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH AGITPQWDLETAKTCARDAEAVLASDSYPFFLDAMYGDMPNNWSDDLSGLARLRFITNAF TRMRYCFPNGQLDMYCKDTPENAPAPLKPWFAIPGPVTNDYSVVFGHWASLEGKGTPENI YALDTGCCWGGDLTCLRWEDKTYFVQPSNRQLDLGEGEAVAS >gi|333596726|gb|GL892086.1| GENE 1737 1847428 - 1847907 660 159 aa, chain - ## HITS:1 COG:STM0087 KEGG:ns NR:ns ## COG: STM0087 COG0262 # Protein_GI_number: 16763477 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Salmonella typhimurium LT2 # 1 159 1 159 159 318 96.0 2e-87 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRTTLNKPVVMGRLTWESIGRPLPGRKNI VISSQPGTDDRVQWVKSVDEAIAACGDAEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE GDTHFPDYDPDEWESVFSEFHDADTQNSHSYCFEILERR >gi|333596726|gb|GL892086.1| GENE 1738 1848022 - 1849887 1013 621 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 6 587 9 612 618 394 38 1e-108 MDSHTLIQALIYLGAAALIVPVAVRLGLGSVLGYLIAGCVIGPWGFRLVTDAESILHFAE IGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMLACGLLLGGFCILLGMEWKVAALIGM TLALSSTAIAMQAMNERNLTVSQMGRSTFSVLLFQDIAAIPLVAMIPLLATSGASTTLGA FALSALKVVGALALVVLLGRYVTRPLLRFVARSGLREVFSAVALFLVFGFGLLLEEAGLS MAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSVDFGTLVTHPLRIIILL VGFLVIKMAMLWLIARPLNVPKPQRRWFAVLLGQGSEFAFVVFGAAQMANVLDPEWAKAL TLAVALSMAATPILLVLLTRLEKAGSEQEREADEIDEEQPRVIIAGFGRFGQITGRLLLS SGVKMVILDHDPDHVDTLRKFDMKVFYGDATRVDLLESAGAAKAEVLINAIDDPETSMQM VELVKEHFPHLTIISRARDVDHYIQLRQAGVAAPERETFEGALKSGRMALESLGLGAYEA RERADLFRRFNHEMVEEMVAMASSTATERAAVFKRTSTMLTEIINEDRNHLSLVQRHGWQ GTEEGKHTGDPADEPQSNPSA >gi|333596726|gb|GL892086.1| GENE 1739 1849880 - 1850410 466 176 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 176 1 176 176 326 89.0 1e-89 MVLIIYAHPYPQHSHANKRMLEQARTLENVEIRSLYQRYPDFNIDVAAEQEALSRADLIV WQHPMQWYSTPPLLKLWIDKVFSHGWAYGHGGNALQGKSLMWAVTTGGGESHFDIGAFPG FEVLAQPLQATALYCGLNWLPPFAMHCTFVCDDETLQAQARHYKQRLLEWQEAHNG >gi|333596726|gb|GL892086.1| GENE 1740 1851083 - 1853812 2647 909 aa, chain + ## HITS:1 COG:STM2513_2 KEGG:ns NR:ns ## COG: STM2513_2 COG3468 # Protein_GI_number: 16765833 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 389 909 1 476 476 167 30.0 1e-40 MVINNGIGATISSTTANAVNIQSMLGNFTNSGNIIGAENGIAVSENSSAVTIINTSTGII KGKTGLSTHVGIGINNSGAIIGTNGDAIMATHGNTKLTNSALVQGTENGINVKDTAKLDI KNSGTISGDTAAIMFASNKNNALVLDTGSVLVGDVISTNSTGNNLSLIGTGTEDSNFVGL NEGDGFASVTMNGESWALSGDLDIIGSGDSLLVETGALTLSGAVSNTGNTRVAKDASLQL GDGEKTATLSGGLTNNGTVIFNQGSDFTFATDMTGSGNVEKVDANTLTLTGNNSYTGDTV LHGGTTLVASGAQLGVEGSNATVTVENGATFATAGEVNNNVAILTGGTLAAWNAVQGNAT LRGAGVDTVNGNVTNGGTLLLAAADNSVGNNFTINGDYTGSAGSQIVMNSTLGEDNAPTD HLTITGSSFGQSGVSISNIGGAGAQTINGMEIVNVGGSSEAQLTLAAPVVAGAYEYNLYQ HDDGNWYLESKATPSDEPTDDTDGDNTDGGDNTDNGGNTDNGGNTDNGGNTDNGGDTDNG GNTDNGGNTDNGGNTDNGGNTDNGGNTDNGGDTDNGGNTDNGGNTDNGGNTDNGGNNAPE VMAPEVGAYLGNYLAAQSMFLHKRDDRDQITFRNEEDLNTWMYVKGRYHENDAGGDKVSY DTTTTVLQVGSDFMSKPMDNGILRAGGMFGAGQAKTHSDAKHNVRDAQGKVDGFNVGLYA TWQEDQKLRLGSYIDTWAAYSWYNNKVTSNRNDEDYDSEGFAASVEVGHAWVIKSENERT WKIEPQAQVIYSYLDQENHTDRDGVRVTTLDNDSVFGRLGVKSSYFQQNDVTAWQPYVAV NWLKGAGQNDLAFNDETVSNDTPEDRGQLELGVTGNLNETTTISLRASGEWGENSYAAYG GHILLNHRW >gi|333596726|gb|GL892086.1| GENE 1741 1853862 - 1854095 290 77 aa, chain - ## HITS:1 COG:no KEGG:ECL_00841 NR:ns ## KEGG: ECL_00841 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 77 1 77 77 119 97.0 3e-26 MQNKLLIASVLAATAMFTVAGCSSNQAVKTTDGKTIVTDGKPQVDDDTGLVSYKNAETGQ TEQINRDQVKSMGELDN >gi|333596726|gb|GL892086.1| GENE 1742 1854278 - 1857502 4596 1074 aa, chain - ## HITS:1 COG:STM0067 KEGG:ns NR:ns ## COG: STM0067 COG0458 # Protein_GI_number: 16763457 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Salmonella typhimurium LT2 # 1 1074 1 1074 1075 2083 97.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA DAIDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVGYPCIIRPSFTMGGTGGG IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAELG INGLDADFLRVLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFSTDT AYMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI EVNPRAARTVPFVSKATGIPLAKVAARVMAGQTLAQQGVTKEIIPPYYSVKEVVLPFNKF PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKSGRALLSVREGDKERVVDL AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQISK >gi|333596726|gb|GL892086.1| GENE 1743 1857521 - 1858564 1051 347 aa, chain - ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 347 36 382 382 678 94.0 0 MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNAADEESSQVHAQGLVIRDLPLIASNFRNT EDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNLDATLALEKAKAFLGLNG MDLAKEVTTAEAYSWTQGSWTLEGDLPEAKPESELPFHVVAYDFGAKRNILRMLVDRGCR LTVVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIDAIKSFLETDIPVFGICLGHQLL ALASGANTVKMKFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEATMPANLRVTHKSLFDG TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK >gi|333596726|gb|GL892086.1| GENE 1744 1859124 - 1859945 854 273 aa, chain - ## HITS:1 COG:ECs0034 KEGG:ns NR:ns ## COG: ECs0034 COG0289 # Protein_GI_number: 15829288 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 443 91.0 1e-124 MHDAQIRVAIAGAGGRMGRQLIQAALQMDGVALGAALEREGSSLLGADAGELAGAGQTGV TVQSSLEAVKDDFDVFIDFTRPEGTLAHLAFCRQHGKGMVIGTTGFDEAGKQAIQDASRE IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIVEAHHRHKVDAPSGTALAMGEAIAY AMDKDLKDIAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR MTFANGAVRSALWLKGKSNGIFDMRDVLNLNDL >gi|333596726|gb|GL892086.1| GENE 1745 1860078 - 1861085 728 335 aa, chain - ## HITS:1 COG:BMEI0019 KEGG:ns NR:ns ## COG: BMEI0019 COG1609 # Protein_GI_number: 17986303 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 4 333 26 355 372 226 36.0 4e-59 MTGITLADVAKRAGVSTATVSMVLCNKGRISQSTRERVLKALDESGYVYNQTAANLRNRR SNQVGLLLHDITNPFYSEMTAGLSHEMERHELLLFLANSEESAERQQKFVDSLMRNNVSG MVLCAARETPQAFFEGLKRRNIPAIMVVRPLNDPDFDFVGTDNFLGTQMATEHLLRMGHR HIAFIGGSQNSGSRAQRIGGFTSKLLEYGVTPNPAWIRTSHASQSDGARVAEALLLEHPH ISAAICYQDVVALGVMQSLRKMGREPGRDFALVGFDDITEAALVQPALTTVSVAAKEIGR KAGELLYSRIQGNDEPAKRIILPPALVVRESCGFR >gi|333596726|gb|GL892086.1| GENE 1746 1861274 - 1863016 1576 580 aa, chain + ## HITS:1 COG:MYPU_7250 KEGG:ns NR:ns ## COG: MYPU_7250 COG1482 # Protein_GI_number: 15829196 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Mycoplasma pulmonis # 233 507 5 256 303 84 26.0 6e-16 MTTYDKFPTVAIKGYDDSAWQGWEAITRVLEAKTQQRSRTVLVMDCYPGVRMTELEENVL PRLRPTLAINAEQARRDEGAIHEMLARNLTDDRVFGVLSCHQPGEFFDAARLKTLQEQVN QCTEGLIVIYGPGATLVHPGDVLVYADLPRWEIQQRMRSGEMGNWGAENQQEDMLRRYKR AFFVEWRVFDRHKTPLLRRTDFLLDTTQANQPAMVSGEALRAGLKQTTTQPFRVAPFFDP GVWGGQWMKQQFDLDPSAPNYAWCFDCVPEENSLLLRFGAVRIEIPSLDLVLLEPRALLG EKVHARFGAEFPIRFDFLDTMGGQNLSLQVHPITEYIQQQFGMHYTQDESYYILEAEPGA VVYLGTKTGTDPEAMMDDLRRAGRGEKPFNDDHFVNQIPAKKHDHFLIPAGTVHCSGAGT MVLEISATPYIFTFKLWDWGRLGLDGLPRPVHLEHGEKVIDWERDTQWVHQHLVNQFEPV AEGNGWREERTGLHEREFIETRRHWFSEPVVHHTGGGVNVLNLVEGDEAIVDSPTGAFEP FTVHYAETFIIPASVGEYRISPSSRACGQPLATIKAWVRS >gi|333596726|gb|GL892086.1| GENE 1747 1863019 - 1863447 419 142 aa, chain + ## HITS:1 COG:CAP0066_1 KEGG:ns NR:ns ## COG: CAP0066_1 COG2893 # Protein_GI_number: 15004770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 140 1 137 157 66 33.0 1e-11 MIHFIVATHGPLATALLESGRMVYGDLPNVHAVCLTEQAGIEGFRQDFSATLKAASANAE GVLVLCDMQSGTPWNVACEAAFTPLTQPPVAVVAGVNFPMLLQTDEVMMARDVHHAAAQL IELTLPTLVQAKPADTAQTDDF >gi|333596726|gb|GL892086.1| GENE 1748 1863458 - 1863952 647 164 aa, chain + ## HITS:1 COG:CAC1458 KEGG:ns NR:ns ## COG: CAC1458 COG3444 # Protein_GI_number: 15894737 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Clostridium acetobutylicum # 1 160 1 158 164 122 41.0 4e-28 MSISFVRIDDRVIHGQLITRWARELPCDGIVAIDDAVAADPLLSSVMKGAVSDTKVWLFD TATAIEKLPKVIASEKRYFVIGKSPLTLQRIEQAGISLKNSNGKINVGPMSARANTITIG PNQSVTPDEAAAFEWLTGQGHAIEFRLVPDASFYTWQDARQKLK >gi|333596726|gb|GL892086.1| GENE 1749 1863963 - 1864760 1047 265 aa, chain + ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 2 264 5 280 281 149 36.0 6e-36 MIIEAALIGLLCYLGALSSPWLLGLTGGWYLISRPLISGMLVGLILGDIKTGIMIGVAVQ AVYIAMVTPGGSMPADLNFVAYPAIALGILSGKGPEVAVALAATIGIAGTILFNAMMVLN SFWNHRADVALENGDERGIYLNSAIWPQAMNFVLRFVPTFIAVFFGAQYISGFMDSLPHI VLSTMNVLGGILPAVGIAILLKQIIKSYSMLIYFLVGFVCIVFLKLNMVALVIVGALLAL IHYNYKPEAPQAVASAPVPDDEDEF >gi|333596726|gb|GL892086.1| GENE 1750 1864760 - 1865578 962 272 aa, chain + ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 1 270 1 271 277 241 45.0 1e-63 MEERKLTRKDLRRCWRAWMMHNLSSMSFERLESFGFCLSMLPVAKKLYPDAAQRTEMLRR HASFYNTEPQIGAIVNGMALGLEEKKANGEPIDGETINTLKVGLMGPIAGIGDSMIPGML IPILLSIGMALAAGGNILGPLFYTVAWLAIIIPGSWFLFLKGYQMGSGSVEMLVSSKSTR LREALSLLGVFVMGGVAASYVKLGTGLEFITRDGVNIHLQQMLDGIFPQLLPLAVVLGTW YLMAKRGVSPVKAMALLLILAALGVASGLFAG >gi|333596726|gb|GL892086.1| GENE 1751 1865605 - 1866375 693 256 aa, chain - ## HITS:1 COG:STM2757 KEGG:ns NR:ns ## COG: STM2757 COG2140 # Protein_GI_number: 16766069 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Salmonella typhimurium LT2 # 12 245 22 256 280 77 25.0 4e-14 MANYGLDMTITRQPLGFCYGEDVTGPMPEIRTLDQIRPSLRNPDCEGPEQVYAIAMDVAR LADRQELEKRMLLFGVVTYAAGTLGDEPVRSQGHVHRISQHSGWSPPELYEIWQGKAIIY MQEYVDDDPGRCFAVLAGPGEKVLVPPGWGHATISASPNEPLTFGAWCDREYGFEYEAVR ARKGLAWYPLVQGDHIVWQHNSHYRPGRLQMVTPRSYLEFGITDAPVYQQFIDEPARFQF ISRPDKAAELWNNFHP >gi|333596726|gb|GL892086.1| GENE 1752 1866368 - 1866922 371 184 aa, chain - ## HITS:1 COG:PH1956 KEGG:ns NR:ns ## COG: PH1956 COG2140 # Protein_GI_number: 14591696 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Pyrococcus horikoshii # 10 169 12 172 192 124 41.0 9e-29 MTSDIFLPPQVAWATGALAGGPLTRKTTRLTDLPDIFSDGEAWTCGDPQKSVYDVDVLDS PVGEGALFVGVTHLYAGKIGGEFFMTRGHFHQRREQGEVYFGLRGVGLLLLQTEAGDARL EQVTAGSVHIIPPFTAHRLINTGNETLSSLAVWPSIAGHDYAALAEGFTVRIFASGKGYE VRHG >gi|333596726|gb|GL892086.1| GENE 1753 1867080 - 1868030 431 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 298 1 287 632 170 34 2e-40 MQILLANPRGFCAGVDRAISIVENALEIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HAGHPEVEGTMGQYSNPEGGMYLVESPEDVFTLNVKNEARLSFMTQTTLSVDDTSDVIDA LRQRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGK AAFLIDDATDIQEAWVKNAACVGVTAGASAPDILVQNVIARLQEMGGGEAVPLEGREENI VFEVPKELRIDAREVE >gi|333596726|gb|GL892086.1| GENE 1754 1868032 - 1868481 265 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225086978|ref|YP_002658248.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] # 1 144 1 143 148 106 39 4e-21 MSKSVQSNSAVLVHFTLKLDDGSTAESTRNNGKPALFRLGDTSLSEGLEQQLLGLKEGEK KAFSLEPDAAFGVPSPDLVQYFSRREFMDAGEPEVGAIMLFTAMDGSEMPGVIREINGDS ITVDFNHPLAGRTVHFDVEVLEIDPALEA >gi|333596726|gb|GL892086.1| GENE 1755 1868563 - 1869063 710 166 aa, chain - ## HITS:1 COG:STM0047 KEGG:ns NR:ns ## COG: STM0047 COG0597 # Protein_GI_number: 16763437 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Salmonella typhimurium LT2 # 1 165 1 165 166 298 94.0 3e-81 MSKTLCSTGLRWLWLVVVVLIIDLGSKFLILQNFALGDTVPLFPSLNLHYARNYGAAFSF LADSGGWQRWFFAGIAIGICVVLAVLMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF VVDMIDFYVGDWHFATFNLADSAICVGAALIVLEGFLPKPAAKEQV >gi|333596726|gb|GL892086.1| GENE 1756 1869063 - 1871879 3261 938 aa, chain - ## HITS:1 COG:ileS KEGG:ns NR:ns ## COG: ileS COG0060 # Protein_GI_number: 16128020 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 938 1 938 938 1826 91.0 0 MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYA NGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELKVEQEFGKPGEKFTAA EFRAKCREYAATQVDGQRADFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHK GAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFEAVDQDAIKAKFGLPGVSGPISLVIW TTTPWTLPANRAISLSGEFEYALVQIDGRAVILAKDLVESVLKRANITDYSVLGTVKGDA LELMRFKHPFLDFDVPAILGDHVTLDAGTGAVHTAGGHGPDDYNISLKYGLEIANPVGPD GSYLPGTYPALDGINVFKANDIIVDMLRDRGALLHVEKMQHSYPCCWRHKTPIIFRATPQ WFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHK ETQELHPNTLELMEEVAKRVEVDGIQAWWDLDARDILGADADNYEKVPDTLDVWFDSGST HSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQG RKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTAR FLLANLNGFDPVKDMVKPEEMVVLDRWAVGCAKAAQEDIVKAYESYDFHEVVQRLMRFCS IEMGSFYLDIIKDRQYTAKADSVARRSCQTALFHIAEALVRWMAPIMSFTADEIWGYLPG DREKYVFTGEWYEGLFDLSSTEAMNDAYWDELLKVRGEVNKVIEQARADKKVGGSLEATV TLYAEPELAAKLTALGDELRFVLLTSGAKVADYAEASADAQQSELLKGLKVALSKADGEK CPRCWHYTTDVGQVAEHADICGRCVSNVAGDGEKRKFA >gi|333596726|gb|GL892086.1| GENE 1757 1871925 - 1872851 411 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 306 1 312 317 162 35 4e-38 MKLIRGIHNLSQAPHGCVLTIGNFDGVHRGHQALLQGLRKEGEARGLPVVVMIFEPQPLE LFAGEKSPARLTRLREKLRYLAESGVDYVLCIRFDRRFAALTAQNFVSDLLVRQLGVQFL AVGDDFRFGAGRQGDFLLLQKAGLEYGFDVTSTMTFCEGGVRVSSTAVRQALANDDLDTA ETLLGHPFTISGRVVHGDALGRTIGFPTANIPLRRQVSPVKGVYAVEVAGLGEKPFYGVA NIGTRPTVAGVRQQLEVHLLDVVMDLYGRHIDVILRKKIRNEQRFSSLDELKAQIARDEL TAREFFGL >gi|333596726|gb|GL892086.1| GENE 1758 1872926 - 1873129 62 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSIPSFVNGFVQISAVNVATLRYVVMAQDSTSLSFVNTAFRRKNRSSRADFFAVKGQRD EIIQLSV >gi|333596726|gb|GL892086.1| GENE 1759 1873180 - 1873443 418 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146310246|ref|YP_001175320.1| 30S ribosomal protein S20 [Enterobacter sp. 638] # 1 87 1 87 87 165 97 7e-39 MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQNAFNEMQPIVDR QAAKGLIHKNKAARHKANLTAQINKLA >gi|333596726|gb|GL892086.1| GENE 1760 1873502 - 1874401 936 299 aa, chain - ## HITS:1 COG:nhaR KEGG:ns NR:ns ## COG: nhaR COG0583 # Protein_GI_number: 16128014 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 296 3 298 301 585 91.0 1e-167 MSHLNYNHLYYFWHVYKQGSVVGAAEALYLTPQTITGQIKALEERLQGKLFKRKGRGIEP SELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSGVLDAAVVEDE QIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECGVSFWCINPPPE KPFPACLEERRLLVPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGEAHNAIFV APTLYAHDLYSDDKITEIGRVDNVMEEYHAIFAERMIQHPAVQRICNRDYSALFTPPAI >gi|333596726|gb|GL892086.1| GENE 1761 1874460 - 1875635 1342 391 aa, chain - ## HITS:1 COG:STM0039 KEGG:ns NR:ns ## COG: STM0039 COG3004 # Protein_GI_number: 16763429 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 522 82.0 1e-148 MKLLHRFFSSEASGGIILIIAAVAAMLLANMGMTRDLYHAFLETPVELKVGALEINKNML LWINDALMAVFFLLVGLEVKRELVIGSLASRQRAAFPVIAAIGGMVVPALLFLAFAWQDP VARDGWAIPAATDIAFALGVLALLGSRVPTALKIFLMALAIIDDLGAIVIIALFYTSDLS VLSLSVAAVAIAVLALLNIFNVRRTGIYILVGMVLWTAVLKSGVHATLAGVIVGFFIPLK EKDGKSPAKQLEHVLHPWVGFMILPLFAFANAGVSLAGVTLDGLTSVLPLGIIAGLFIGK PLGISLFCWLALKLKLASLPNGTTFRQIMAVGVLCGIGFTMSIFISTLAFGASAPELIIW AKLGILIGSLLAAVVGYTLLKVKLSGQAVQA >gi|333596726|gb|GL892086.1| GENE 1762 1875809 - 1876954 1345 381 aa, chain - ## HITS:1 COG:STM0013 KEGG:ns NR:ns ## COG: STM0013 COG0484 # Protein_GI_number: 16763403 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Salmonella typhimurium LT2 # 1 381 1 379 379 667 94.0 0 MAKQDYYEILGVPKTAEEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEVLTDA QKRAAYDQYGHAAFEQGGMGGGGFGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGA DLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQG FFAVQQACPHCHGRGTLIKDPCTKCHGHGRVEKTKTLSVKIPAGVDTGDRIRLAGEGEAG EHGAPAGDLYVQVQVKQHAIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVNLKIPG ETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNDKQKQLLKELQESFGGPTGEK NSPRSKSFFDGVKKFFDDLTR >gi|333596726|gb|GL892086.1| GENE 1763 1877042 - 1878955 2305 637 aa, chain - ## HITS:1 COG:STM0012 KEGG:ns NR:ns ## COG: STM0012 COG0443 # Protein_GI_number: 16763402 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Salmonella typhimurium LT2 # 1 637 1 638 638 1078 97.0 0 MGKIIGIDLGTTNSCVAIMDGTTARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIAADNGDAWLDVKGTKTAPPQISAEVL KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKEVGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDTRLINYL VDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIQDVILVGGQTRMPMVQKKVAEFFGKE PRKDVNPDEAVAIGAAVQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTPLINKNTTIPT KHSQVFSTAEDNQSAVTIHVIQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEAEIEKMVRDAEANAESDRKFEELVQTRNQGD HLLHSTRKQVEEAGDKLPAEDKTAIETALSALETSLKGEDKADIEAKMQELAQVSQKLME IAQQQHAQQQAGADASQNNAKDDDVVDAEFEEVKDKK >gi|333596726|gb|GL892086.1| GENE 1764 1878907 - 1879101 92 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDAVVTPSCKQPQCVDLKKNKSGQLKKHVLPLLQVHNHMLTEFLVETFRWVKLLVSTWVL PTLV >gi|333596726|gb|GL892086.1| GENE 1765 1879252 - 1879818 863 188 aa, chain + ## HITS:1 COG:STM0009 KEGG:ns NR:ns ## COG: STM0009 COG1584 # Protein_GI_number: 16763399 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 276 87.0 2e-74 MGNTKLANPAPLGLMGFGMTTILLNLHNIGMFPMDGVILAMGIFYGGIAQIFAGLLEYKK GNTFGLTAFTSYGSFWLTLVAILLMPKMGLAEAANAHFLGVYLGLWGVFTLFMFFGTLKA NRALQFVFLSLTVLFALLAIGHLADNEGIVHVAGWVGLVCGASAIYLAMGEVLNEQFGRT ILPIGEKH >gi|333596726|gb|GL892086.1| GENE 1766 1879795 - 1881117 1238 440 aa, chain - ## HITS:1 COG:YPO0465 KEGG:ns NR:ns ## COG: YPO0465 COG0477 # Protein_GI_number: 16120794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 2 418 27 442 462 592 77.0 1e-169 MSHNTRPLNRLDYKTLTLAALGGALEFYDFIIFVFFAAVVGALFFPADIPEWLRQVQTFG IFAAGYLARPLGGIVMAHFGDLVGRKKMFTLSILLMAVPTLAIGLLPTYESMGIIAPLLL LLMRILQGAAIGGEVPGAWVFVAEHVPVRRIGIACGTLTAGLTIGILLGSVVATIINTSM TQQAVHDWGWRIPFLLGGAFGLVAMYLRRWLQETPIFLEMQQRKALAQELPVKTVVVRHK KAVVVSMLLTWLLSAGIVVVILMSPVWLQKQYGFAPAVTLQANSIATIMLCFGCLAAGLA ADRFGASVTFIVGSLLLAASSWAFYHLAGNHPEQLFLLYGIVGLCVGVVGAVPYVMVRAF PPEVRFTGISFSYNVSYAIFGGLTPIVVTVLMGVSPLAPAWYVLALSLMGLVLGMWLRQS EGRRARDAGTTEGSVFFTNR >gi|333596726|gb|GL892086.1| GENE 1767 1881240 - 1881833 688 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 8 193 2 191 194 269 72 3e-70 MDMNTLRIGLVSISDRASSGVYQDKGIPALEAWLSSALTTPFEIQTRLIPDEQPIIEQTL CELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSR QVGVIRKQALILNLPGQPKSIKETLEGVKAEDGSVIVHGIFASVPYCIQLLDGPYVETDG NVVAAFRPKSARRETIS >gi|333596726|gb|GL892086.1| GENE 1768 1881938 - 1882891 1277 317 aa, chain - ## HITS:1 COG:STM0007 KEGG:ns NR:ns ## COG: STM0007 COG0176 # Protein_GI_number: 16763397 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 588 94.0 1e-168 MTDKLTSLRQFTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDEAVTWAK AQSNDRAQQVVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVG RILDWYKANTDKKEYAASEDPGVISVTEIYEYYKQHGYETVVMGASFRNVGEIIELAGCD RLTIAPALLKELAESEGTIERKLSYTGEVKARPERITESEFLWQHNQDPMAVDKLADGIR KFAIDQEKLEKMIGDLL >gi|333596726|gb|GL892086.1| GENE 1769 1883154 - 1884587 815 477 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 8 448 10 446 456 318 39 6e-85 MPDFFFFINEVLWGSIMIYLLSGAGIWFTWRSGLIQFRYIRKFGRSLKNSVTPQPGGLTS FQALCTSLAARVGSGNLAGVALAIGAGGPGAVFWMWVTAIIGMATSFAECSLAQLYKEKD SKGQFRGGPAWYMARGLGMRWMGVLFSLFLLIAYGLIFNTVQANSVAHALRFAFNCPEWL TGGALALLTLLTIVTGLKGVARLMQWLVPLMALLWVSTSLLVCAIHIDEVPNIIATIFKS AFGWREAASGALGYTVSQALAAGFQRGMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQM IGVFTDTIVICSASAMIMLLAGATEHPSGNTTGIHWVQQALVSLVGGWGAGLVALVVGLF AFSSIAVNYIYAENNLIFLKVDSRLARNVLRAGVLTMVIVGSLLSMPMIWQIADVIMALM AITNLTAILLLSPVVALIARDYLRQRKLGVQPVFDASRYPEIESQLAPGTWDDLPRQ >gi|333596726|gb|GL892086.1| GENE 1770 1884654 - 1885427 965 257 aa, chain + ## HITS:1 COG:ECs0006 KEGG:ns NR:ns ## COG: ECs0006 COG3022 # Protein_GI_number: 15829260 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 257 1 257 258 456 88.0 1e-128 MLILISPAKTLDYQSPLATERYTQPELLDYSQQLIHEARKLSAPQIASLMSISDKLADLN ATRFHDWQPDFTPANARQALLAFKGDVYTGLQAETFSEADFDFAQQHLRMLSGLYGVLRP LDLMQPYRLEMGIRLENAKGKDLYQFWGDVITDTLNAALQAQGDNVVINLASDEYFKSVK PKKLDADIIKPVFLDEKNGKFKVISFYAKKARGLMSRFIIQNRLTKPEQLTGFNCEGYFF DEASSGKNELVFKRHEQ >gi|333596726|gb|GL892086.1| GENE 1771 1885460 - 1885717 172 85 aa, chain - ## HITS:1 COG:no KEGG:ECL_00817 NR:ns ## KEGG: ECL_00817 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 85 14 97 97 102 84.0 6e-21 MLVAPMAVQASEITLVPAVKLQIGDRDNNGHYWDGGRWRDHDWWKAHYDWRDNHWRPHDE HRDRDHHHDDRRHDDHRPGPDWKHH >gi|333596726|gb|GL892086.1| GENE 1772 1886005 - 1887291 1998 428 aa, chain - ## HITS:1 COG:ECs0004 KEGG:ns NR:ns ## COG: ECs0004 COG0498 # Protein_GI_number: 15829258 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Escherichia coli O157:H7 # 1 425 1 425 428 780 92.0 0 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFQLTEIDELLKQDFVTRSTKILS AFIGDEIPQELLEERVRAAFAFPAPVKQVEPDVGCLELFHGPTLAFKDFGGRFMAQMLTH ISGDKPVTILTATSGDTGAAVAHAFYGLKNVRVVILYPKGKISPLQEKLFCTLGGNIETV AIDGDFDACQALVKQAFDDEELKAALGLNSANSINISRLLAQICYYFEAVAQLPQEARNQ LVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLKDGKWAPNATQATLSNA MDVSQPNNWPRVEELFRRKVWRLGDLGYAAVTDETTKATMRELKAVGYTSEPHAAIAYRA LRDQLQPGEYGLFLGTAHPAKFKESVEAILGETLPLPKELAERAELPLLSHELPADFAAL RKLMMTRA >gi|333596726|gb|GL892086.1| GENE 1773 1887295 - 1888224 1183 309 aa, chain - ## HITS:1 COG:ECs0003 KEGG:ns NR:ns ## COG: ECs0003 COG0083 # Protein_GI_number: 15829257 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Escherichia coli O157:H7 # 1 308 1 308 310 590 90.0 1e-168 MVKVYAPASSANMSVGFDVLGAAVTPVDGSLLGDTVTVEAADSFSLNNVGRFASKLPSEP RENIVYQCWERFCQEIGKNVPVAMTLEKSMPIGSGLGSSACSVVAALVAMNEHCGKPLNN SRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENGIISQQVPGFDEWLWVLAYPGI KVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYTRQPQLAAKLMKDVIAEPYRTKLLP GFNDARQASMDIGAQACGISGSGPTLFALCDKPDTAQRVADWLSKHYLQNQEGFVHICRL DTAGARVLG >gi|333596726|gb|GL892086.1| GENE 1774 1888226 - 1890688 2915 820 aa, chain - ## HITS:1 COG:STM0002_1 KEGG:ns NR:ns ## COG: STM0002_1 COG0527 # Protein_GI_number: 16763392 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 861 93.0 0 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTIGGQDA LPNISDAEHIFADLLQGLADAQPGFPLAQLKATVELEFAQIKHVLHGISLLGQCPDSINA ALICRGEKLSIAIMAGVLEARGHHVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASKIP SDHMILMSGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQV PDARLLKSMSYQEAMELSYFGAKVLHPRTISPIAQFQIPCLIKNTGNPQAPGTLIGASAD EDDLPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRNGISVVLITQSSSEYSISF CVPQGDCLRARRALEEEFYLELKEELLEPLSIQERLAVISVVGDGMRTLRGISAKFFAAL ARANINIVAIAQGSSERSISVVVDNDDATTGVRVVHQMLFNTDQVIELFLVGVGGVGGAL LEQVKRQQEWLKKKHIDLRVCGIANSKALLTNVHGLNLENWQAELEEAKEPFNLGRLIRL VKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRLAASKSR RKFLYDTNVGAGLPVIENLQNLLNAGDELQRFSGILSGSLSFIFGKLDEGMSLSEATRAA RELGYTEPDPRDDLSGMDVARKLLILVRETGRELELSDIVIEPVLPAEFDSSGDVSTFMA NLPQLDDAFAARVAKARDEGKVLRYVGNIEEDGVCRVKIAEVDGNDPLYKVKNGENALAF YSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|333596726|gb|GL892086.1| GENE 1775 1891049 - 1891735 505 228 aa, chain - ## HITS:1 COG:lasT KEGG:ns NR:ns ## COG: lasT COG0565 # Protein_GI_number: 16132220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli K12 # 1 228 1 228 228 336 77.0 2e-92 MHLSIVLVAPARAENIGAAARAMKTMGFTDLRIVDSTAHLEPPARWVAHGSGDILDNITT YATLADALHDISFTVATTARSRAKFHYYATPAELVPMLEEKSQWLEKAALVFGREDSGLT NEELELADVLTGAPMVADYPSLNLGQAVMVYCYQLASLIQISQPPVTMPDENQLAALRVR ADKLLVQLGVADDQKMVDWLQQRLGRLEQRDTAMLHRLLHDIEKKLAE >gi|333596726|gb|GL892086.1| GENE 1776 1892371 - 1893087 861 238 aa, chain + ## HITS:1 COG:STM4598 KEGG:ns NR:ns ## COG: STM4598 COG0745 # Protein_GI_number: 16767839 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 238 1 238 238 461 97.0 1e-130 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSENDINLVIMDINLPGK NGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGTVSEERRSVDSYKFNGWELDINSRSLISPNGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLQE >gi|333596726|gb|GL892086.1| GENE 1777 1893134 - 1894483 1353 449 aa, chain - ## HITS:1 COG:STM4590 KEGG:ns NR:ns ## COG: STM4590 COG4452 # Protein_GI_number: 16767831 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Salmonella typhimurium LT2 # 1 449 2 449 449 562 64.0 1e-160 MKSPLFWKVSTLLGCILLLLVPLCMVSNLISERESYRNDVENTLRQSTSGPQKLVGPLMA IPVTEVFYKSEDEKQVEYKKSYMRFILPESLLVEGNQHVESRNIGIYDGQIWNTELNIKA RFNTEKITQLKGETMTLGQPFIVVGVGDARGIGTVNVSSINGETLSVEPGSGVYGGLSGI HIPLTDKALEPKTFVMEMSLNLAGTGSFAVVPVGRNSEMALNSNWPHPGFMGNYLPVKHK IGDSGFQANWQSSWFANNLESWFNGSESPTWESIPAFSVTVATPADQYQLTDRAIKYAIL LIALTFMAFFVFETLTGLRLHPMQYLLVGLSLVLFYLVLLALSEHVGFTPAWVVASLVGA AMNGMYLHAVLKSWKRSGLFVLALLGLDVVMWFLLRSEDSALLLGSAVLALALFAVMYLT RHLDWYSLSQPKRPEPPASPDDDTMRIWK >gi|333596726|gb|GL892086.1| GENE 1778 1894543 - 1895967 1020 474 aa, chain - ## HITS:1 COG:creC KEGG:ns NR:ns ## COG: creC COG0642 # Protein_GI_number: 16132216 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 474 1 474 474 688 73.0 0 MRIGMRLLLGYFLIVAIAAWFVLSIFVQEVKPGVRRATEGTLIDTATLLAEVGREDLLSG NAQQGKLAQAFSQLHQRPFRANIGGIHKVRNEYHVYMTDAQGRVVFDSTGLALGQDYSRW NDVWLTLRGEYGARSTQINPEDPESTVMYVAAPVVEQGKIIGVLSVGKPNSAMAPVIQRS ERRILWAGGALLGIALLIGLFVAWWINRSISTLSRYADSVTTDTPLPLPNPGSSELHKLA QALENMRIRLEGKNYIERYVHALTHELKSPIAAIRGAAEILAEQPPPQVAARFIDNILVQ NARMQSLVEKLLAQARLENRVEITPEAVRVDSLFTRLADARSAQLASKEIALTLQPASLY VKGDPDLLEQSLGNLLDNAIDFTPEGGSIELAAREEHGQIQLIVTDSGSGIPDYARDRIF ERFYSLPRENGVKSSGLGLAFVQEVARLHQGEITLRNRDEGGVMATLTLHRPFT >gi|333596726|gb|GL892086.1| GENE 1779 1895967 - 1896656 524 229 aa, chain - ## HITS:1 COG:creB KEGG:ns NR:ns ## COG: creB COG0745 # Protein_GI_number: 16132215 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 226 1 226 229 358 77.0 5e-99 MQQPVVWLVEDETSIADTLIYMLQQEGFAVEAFERGLPVLEAARRQVPALAILDIGLPDI SGFELCRQLLAQHPSLPVLFLTARSDEVDKLLGLEMGADDYVAKPFSPREVCARVRTILR RMQKSAAPAETVRIGQFELNEPAARISWCGEALPLTRYEFLLLKTLLQAPGRVFSRQQLM DKVWGEDGDSFDRTVDTHIKTLRAKLRAVNEELSPISTHRGMGYSLGLY >gi|333596726|gb|GL892086.1| GENE 1780 1896671 - 1897141 586 156 aa, chain - ## HITS:1 COG:STM4587 KEGG:ns NR:ns ## COG: STM4587 COG3045 # Protein_GI_number: 16767828 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 155 1 155 157 263 87.0 9e-71 MKYKVLVFAALALMAGRVAQAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVKNVTCYVSRA KTGGIKGGLGLAEDTSDAAISCQQVGPVELSDKIKNGKAQGDVVFQKRTSLVFKKLQVVR FYDAKRNTLAYLAYSDKVVEGSPKNAISAVPIMPWH >gi|333596726|gb|GL892086.1| GENE 1781 1897357 - 1898226 886 289 aa, chain + ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 504 83.0 1e-143 MDQAGIIRDLLTWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRL GEFAMPKYEIITLPETHLVGTTQSYSCSLEQISEFRHQMRVQFWREFLSHAPAIPPILYG LNETHPSQEKDDEQEVFYTTALTPDMANGYIHGSKPVVLEGGEYVMFSYEGLGTGVQEFI LTVYGTCMPMLNLNRRKGQDIERYYPAHDAKPEEGPINLRMEFLIPVRR >gi|333596726|gb|GL892086.1| GENE 1782 1898223 - 1898870 739 215 aa, chain - ## HITS:1 COG:STM4585 KEGG:ns NR:ns ## COG: STM4585 COG0406 # Protein_GI_number: 16767826 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Salmonella typhimurium LT2 # 1 215 1 215 215 354 86.0 8e-98 MLQVYLVRHGETQWNAERRIQGQSDSPLTDKGVQQAWQVAERARTLGITHVISSDLGRTQ QTARIIADACGCDVTLEPRLRELDMGVLEKRPIDTLTETEEGWRRTLVNGTEDGRIPEGE SMQELSVRMHAALAECLKLPAGSRPLLVSHGIALGCLVSTILGLPAYAERRLRLRNCSIS RIDYQESAWLASGWVVEMAGDISHLDAPALDELQR >gi|333596726|gb|GL892086.1| GENE 1783 1898920 - 1899435 538 171 aa, chain + ## HITS:1 COG:STM4584 KEGG:ns NR:ns ## COG: STM4584 COG1986 # Protein_GI_number: 16767825 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 284 85.0 6e-77 MHHVVSATTNPAKIQAILRAFEEIFGEGSCHIDAVGVESGVPEQPFGSEETRAGARNRVA NAKAAAPDADFWVAIEAGIDEGATFSWVVIESREQRGEARSATLPLPEIILEKVREGEAL GPVMSQYTGIDEIGRKEGAIGVFTAGKLTRSSVYHQAVILALSPFHNAIYR >gi|333596726|gb|GL892086.1| GENE 1784 1899426 - 1899755 380 109 aa, chain - ## HITS:1 COG:STM4583 KEGG:ns NR:ns ## COG: STM4583 COG2973 # Protein_GI_number: 16767824 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Salmonella typhimurium LT2 # 1 107 1 107 108 146 89.0 8e-36 MTQHSPYSSAMAEQRHQEWLRFVELLRQSYEQDLHLPLMQLMLTPDEREALGTRVRIIEE LLRGEMSQRELKNELGAGIATITRGSNSLKSAPVELRQWLESVLLSDQR >gi|333596726|gb|GL892086.1| GENE 1785 1899811 - 1901748 2102 645 aa, chain - ## HITS:1 COG:ECs5350 KEGG:ns NR:ns ## COG: ECs5350 COG0741 # Protein_GI_number: 15834604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 645 10 654 654 1122 88.0 0 MEKAKRVVWRLLAASVCVMAVSQAVHADSLDEQRSRYAQIKQAWDNKQMDTVQALMPTLK DYPLYPYLEYRQITDDLMNQPTVTVNNFIQANPTLPPARTLKSRFVNELARREDWRGLLA FSPDKPGATEAQCNYYYAKWATGQQEEAWAGAKELWLTGKSQPNACDPLFSAWRASGKQD PLSYLERIRLAMKAGNTRLVTVLAGQMPADYQTIASAVISLANDPNTVLTFARTTGATDF TRQMAAVAFTSVARDDVENARLMIPQLVQAQKLNDDQTQELRDIVAWRLMGTDVTDEQAR WRDDAVMRSNSVSLVERRVRMALGTGDRRGLNTWLARLPMDAKEKDEWRYWQADLLLERG REDEAKEILHSLMQQRGFYPMAAAQRLGEEYTLKIDKAPANANPALTQGPEMARVRELMY WNLDNTARSEWANLVTSRTTNEKAQLARYAFDNRWWDLSVQATIAGKLWDHLEERFPLAY KDLFERYTSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVKMFTIPG YSSPSQLLDPETNINIGTSYLQYVYQQFGNNRIFASAAYNAGPGRVRTWLGNSAGRIDAV AFVESIPFSETRGYVKNVLAYDAYYRYFMGQKDTLMSDAEWQRRY >gi|333596726|gb|GL892086.1| GENE 1786 1901996 - 1903642 2291 548 aa, chain + ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 548 8 555 555 1055 95.0 0 MHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTDIEGEARPQP GIKIGYLPQEPQLNPEHTVRESVEEAVSEVVNALKGLDEVYAKYAEPDADFDKLAAQQGK YEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLD EPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSW LEQKDQRLAQEASQEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNNTEYQKRNE TNELFIPPGARLGDKVVEVTNLRKSYGDRLLIDDLTFSVPKGAIVGIIGPNGAGKSTLFR MMSGQEQPDSGSITLGETVKLASVDQFRDAMDNSKTVWEEVSGGLDIMRIGNTEMPSRAY VGRFNFKGTDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETLRALENAL LEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKR IKYKRIAK >gi|333596726|gb|GL892086.1| GENE 1787 1903735 - 1904634 986 299 aa, chain - ## HITS:1 COG:PA3135 KEGG:ns NR:ns ## COG: PA3135 COG0583 # Protein_GI_number: 15598331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 285 3 281 306 174 36.0 2e-43 MFKQLQDMALFALVAEMGSFTAAAQKAELPKSSVSQRISQLEQQVGIRLLNRTTRRISLT FAGEHYLVHCREMLAASERAEYAIQRLRENPSGRLRITCPAGIGATLLAHMNAEFQLRYP DVSLDVSISDDVVDLVESGFDVALRTGKPQDSSLIGRMIGHCPRYMLASPDYLARRAPLT HPRQLVDHRCITHRAWSEWLLRSESEDYRYLPDNAHMTDNLVYARECAIAGAGITLLPAF LLEDKIEKGALVQVLPEWSVEGNDLWLAYPSRKLNSPALMSYIDFAMQFDEVKRYYVGK >gi|333596726|gb|GL892086.1| GENE 1788 1904743 - 1905744 1170 333 aa, chain + ## HITS:1 COG:BH0738 KEGG:ns NR:ns ## COG: BH0738 COG0604 # Protein_GI_number: 15613301 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus halodurans # 11 332 13 337 339 310 50.0 3e-84 MSVKAIAVSPENPSTFIEIAPPMPQPGEHDLLVEVKAVSINPVDTKVHAGIAKNGLKEPR ILGWDASGIVKAVGAGVTGFKPGDEVWYAGDITRPGSNTTHQLIDARIVGHKPTSLGWAA AAALPLTALTAWEGLFERLNIQDADADKTLLIIGGAGGVGSLAIPFAKHNSKVKIIATAS REESARWCRDRGADVVVNYRDLKGELAKQGITFVDYIFILNDTDGHWDAVSDLIAPQGHI CSIVENAHPLNQDKLKSKSAALHWEFMYTRSMYQTADMARQGEILNEVAKLVDDGVVESS LSETLHGLSVESITEAHRRVLEGHMRGKVVVEY >gi|333596726|gb|GL892086.1| GENE 1789 1905918 - 1907150 1594 410 aa, chain - ## HITS:1 COG:STM4580_3 KEGG:ns NR:ns ## COG: STM4580_3 COG3172 # Protein_GI_number: 16767821 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Salmonella typhimurium LT2 # 226 410 1 185 185 371 94.0 1e-102 MSSFDYIKTAIRQKGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFP RMQKNIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDETRDRQLFEDSAMSQQPTV PDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKAFMEEKGIAPNWIYTSEE SDAPQFREHLGIETVLIDPKRTFMNISGAQIRENPFRYWDYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGMRSLG SSVDRREFQSMLVEMLNENNVEFVHVEESDYDSRFLRCVELVKEMMGEQG >gi|333596726|gb|GL892086.1| GENE 1790 1907186 - 1908571 1471 461 aa, chain - ## HITS:1 COG:STM4579 KEGG:ns NR:ns ## COG: STM4579 COG1066 # Protein_GI_number: 16767820 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Salmonella typhimurium LT2 # 1 461 1 460 460 878 96.0 0 MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRGVAASPSVARNERLSGYAGNAG VSKVQKLSDISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL AEQMKTLYVTGEESLQQVAMRAHRLGLPTGNLNMLSETSIEQICMIAEEEQPKLMVIDSI QVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDC SVMLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSS VMVLWEGTRPLLVEIQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVF VNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEA AKHGFRRAIVPAANVPKKIPEGMQVFGVKKLADALNVFDDL >gi|333596726|gb|GL892086.1| GENE 1791 1908583 - 1909551 1206 322 aa, chain - ## HITS:1 COG:ECs5346 KEGG:ns NR:ns ## COG: ECs5346 COG0560 # Protein_GI_number: 15834600 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 595 91.0 1e-170 MPNITWCDLPTDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQTKLG AAMVIVAAWCVEDYQVIRLAGSLTQRATRLAHDAGLDVAPLGKIPHLKTPGLLVMDMDST AIQIECIDEIAKLAGSGELVAEVTERAMRGELDFTASLRQRVATLKGADATILRQVRDEL PLMPGLTQLVLKLETLGWKVAIASGGFTFFADYLRDKLRLTTVVANELEIMDGKLTGQVI GDIVDAQYKANTLTRLAEKYDIPVEQTVAIGDGANDLPMIKVAGLGIAFHAKPKVNEKTE VTIRHADLMGVFCILSGSINQK >gi|333596726|gb|GL892086.1| GENE 1792 1909669 - 1910313 758 214 aa, chain + ## HITS:1 COG:STM4577 KEGG:ns NR:ns ## COG: STM4577 COG3726 # Protein_GI_number: 16767818 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Salmonella typhimurium LT2 # 1 205 1 205 214 326 89.0 2e-89 MARAKLKFRLHRAVIVLICLALLVALMQGASWFSQNHQRQRNPQFEELARTLARQVTLNV APSMRTETPDDKRIAQVLRQLTENSRILDAGVYDEQGDLIARAGEHVDVRDRLALDGKKA GAYFNQQIVEPIQGKNGPLGYLRLTLDTHTLPTEAKQVDNTTNILRLMLLLSLATGVVLA RTLLQGKRTRWQQSPFLLTASKSVPEEEESEKKE >gi|333596726|gb|GL892086.1| GENE 1793 1910353 - 1911366 850 337 aa, chain + ## HITS:1 COG:lplA KEGG:ns NR:ns ## COG: lplA COG0095 # Protein_GI_number: 16132203 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Escherichia coli K12 # 1 337 1 338 338 651 92.0 0 MTTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRR MEEDNVRLARRSSGGAVFHDLGNTCFTFMAGKPEYDKTISTAIVLNALNALGVTAEASGR NDLVVKTPEGDRKVSGSAYRETKDRGFHHGTLLLNADLNRLANYLNPDKKKLQAKGITSV RGRVANLVELLPDITHERICEAVREAFFAHYGERVAAEIISPDNTPDLPNFAETFARQSS WEWNFGQAPAFSHLLDERFAWGGVELHFDVEKGHITRTQIFTDSLNPAPLEALAARLQGC LYRADMLQQECDALLVDFPEQENELRALSAWIAGAVR >gi|333596726|gb|GL892086.1| GENE 1794 1911533 - 1912216 477 227 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B4896 NR:ns ## KEGG: SeAg_B4896 # Name: not_defined # Def: putative outer membrane protein # Organism: S.enterica_Agona # Pathway: not_defined # 1 227 1 229 229 165 46.0 1e-39 MKKSSIAAALFCAAFMTTAHAAETAVLKLKGTLTNSACTPELSNGGIADFGYIRTAELSA TQTNQIGKRDITLTINCQTKTQVGWSIVDNRADSLPSPFITVDDAAANGEYAFSGSSTFG VGKTPGGVNIGAYAVYADLPNVTGNGIAVDVLSHAGDSSTWTKSTTGRPTIGVDVFTVTN KGEKEPIAFTEAVFPLKVVLAVQATDKLSITDDAPLDGQATISLTYL >gi|333596726|gb|GL892086.1| GENE 1795 1912272 - 1912991 1056 239 aa, chain - ## HITS:1 COG:STM4570 KEGG:ns NR:ns ## COG: STM4570 COG0813 # Protein_GI_number: 16767811 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 238 1 238 239 457 98.0 1e-129 MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLEDVREVNNVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVRMDVKLRDVVIGMGACTDSKVNRIR FKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLFYSPEGDMFDVMEKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKA >gi|333596726|gb|GL892086.1| GENE 1796 1913117 - 1914340 1777 407 aa, chain - ## HITS:1 COG:STM4569 KEGG:ns NR:ns ## COG: STM4569 COG1015 # Protein_GI_number: 16767810 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Salmonella typhimurium LT2 # 1 407 1 407 407 809 95.0 0 MKRAFIMVLDSFGIGATEDAERFGDVGSDTLGHIAEACAKGEADNGRKGPLTLPNLTRLG LVKAHEGSTGKIAAGMDGNAEVVGAYAWAHELSSGKDTPSGHWEIAGVPVLFDWGYFSDH ENSFPQELLDKLVQRANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAP TVLQKLVDEKDGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDKTIVFT NFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMELVGEDDILILTADHGCDPTWTGTDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTIAKYFGTSDMEYGKAMF >gi|333596726|gb|GL892086.1| GENE 1797 1914394 - 1915728 1723 444 aa, chain - ## HITS:1 COG:STM4568 KEGG:ns NR:ns ## COG: STM4568 COG0213 # Protein_GI_number: 16767809 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Salmonella typhimurium LT2 # 5 444 1 440 440 783 95.0 0 MGVTVFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTVSEGQIAALAMTIFFHDMSMPER VSLTMAMRDSGTVLDWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRG LGHTGGTLDKLEAIPGFDIFPDDSRFRDIIKDVGVAIIGQTSSLAPADKRFYATRDITAT VDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVSNGAGVRTT ALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLNSGKLAKDDAEA RAKLQAVLDNGKAAEIFGRMVAAQKGPTDFVENYAKYLPTAMLSKAVYADSEGFVSAMDT RALGMAVVSMGGGRRQASDTIDYSVGFTDMARLGDSVDGQRPLAVIHAKDEASWQDAAKA VKAAISLDDKAPETTPTVYRRITE >gi|333596726|gb|GL892086.1| GENE 1798 1915817 - 1916596 1040 259 aa, chain - ## HITS:1 COG:STM4567 KEGG:ns NR:ns ## COG: STM4567 COG0274 # Protein_GI_number: 16767808 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 259 7 265 265 446 98.0 1e-125 MTDLTASSLRALKLMDLTTLNDDDTNEKVIALCHQAKTPVGNTAAVCIYPRFIPIARKTL KEQGTPDVRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALIAGNEQVGFD LVKACKDACAAANVLLKVIIETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPE SARIMMEVIRDMGVSKTVGFKPAGGVRTAEDAQQFLAIADELFGADWADSRHYRFGASSL LASLLKALGHGDGKSASSY >gi|333596726|gb|GL892086.1| GENE 1799 1916859 - 1918394 1817 511 aa, chain + ## HITS:1 COG:no KEGG:ECL_00792 NR:ns ## KEGG: ECL_00792 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 3 511 7 515 515 983 91.0 0 MSDALQQRCQHIVTSPVLTPEQKRHFLALEAENNLPYPALPEAARAALDEGFICDMFEGH APYKPRYVLPDYAKFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDE ILNPYVKILTQDEIDSRIKRFWRYLDRTLPDAFMHANIGPADTPVTRAILRADAELKQVA PNLTFIYDPDVTPSDLLLSVAKNICECSKPHISNGPVNDKIFTKGRYGVVSCYNSLPLAG GGSTLVRLNLKAIAEHSHSPEDFFTRTLPHYCQQQIAIMNARCDFLYEQSGFFENSFLVK EGLIDADRFVPMFGMYGLAEAVNVLCEKAGITGRYGKNEQANALGYRISEQLAAFVENTP VKHSWQHRAMLHAQSGISSDSGTTPGARLPYGDEPDPVSHLLAVAPHHKHYHSGISDILT LDETVKRNPQAVVQLCLGAFNAGMREFTANVAGNDLVRVTGYMVRLSDLEKYREAGSRTN TTWLGEEAARNTRILERQPRVISHEQQMRFS >gi|333596726|gb|GL892086.1| GENE 1800 1918369 - 1919229 541 286 aa, chain + ## HITS:1 COG:yjjW KEGG:ns NR:ns ## COG: yjjW COG1180 # Protein_GI_number: 16132196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 286 1 287 287 434 72.0 1e-121 MNSRCALVSQVIPFSCVDGPGSRLALFLQGCNLRCKTCHNPWTIGRCNDCGDCVPHCPHD ALTIQAGRVWWQESDCQQCDTCLHLCQQQATPMAQRYSVEEILTRIRTSAPFIEGVTVSG GEATTQLPFVVALFTAIKADPSLRHLTCLVDSNGLLSETGWQKLLPVFDGAMVDLKAWGN EHHRFLTGRENTLIKQSIRWLADRHRLTELRLLVIPDRCDYLQHLSPLTAFIHTLGNVPV RINAFHIHGVYGEAARWRSATPEDIEPLALALEQQQITVIRPALYL >gi|333596726|gb|GL892086.1| GENE 1801 1919224 - 1920003 691 259 aa, chain - ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 4 257 5 258 259 371 72.0 1e-103 MHCFVDTHCHFDFPPFSGEETSSIERAAQAGVRAIIVPAIEAARFEKVLALARDNDALYA ALGLHPIVIEHHLDDHIDRLDAMLQNADTKLVAIGEIGLDLYREDPQFERQQTILDAQLR LAKRHDLPVILHSRRTHDKLAMQLKRIDVPRRGVVHGFAGSLQQAQRFIELGYKIGVGGT ITYPRASKTRDVMAQLPLTSLLLETDAPDMPLKDFQGQPNRPEQAARVFAVLCELRQEPD DVIASALLENTRAVFGISL >gi|333596726|gb|GL892086.1| GENE 1802 1920003 - 1921055 939 350 aa, chain - ## HITS:1 COG:STM4563 KEGG:ns NR:ns ## COG: STM4563 COG4667 # Protein_GI_number: 16767804 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Salmonella typhimurium LT2 # 1 350 1 357 357 592 78.0 1e-169 MGQRIPVTLGNIAPLTLKPFHAGQLALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYFGT SAGAQNLSAYVCNQPGYARKVIMRYTTSKEFFNPVRFVRGGNLIDLDWLLDATSSQMPLA MDTAARLFDTGKAFWMCASRGDDYSPGYFSPQKENWLDIIRASSAIPGFYRTGALLEGIS YLDGGISDAVPVQEAARRGAKTIVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNIAK QHETTYGAMQRFIEKPPGKLRIFEIYPPKPLLSMALGSRLPALRMDYKTGRLCGRYFLAT VGKMLAEQPPVQRHKSIILPPAIVANDAVAMPLVDAPQANDGLLDNEDLA >gi|333596726|gb|GL892086.1| GENE 1803 1921178 - 1921339 143 53 aa, chain - ## HITS:1 COG:YPO0432 KEGG:ns NR:ns ## COG: YPO0432 COG5487 # Protein_GI_number: 16120765 # Func_class: S Function unknown # Function: Small integral membrane protein # Organism: Yersinia pestis # 1 52 1 52 53 58 90.0 2e-09 MFRWGIIFLVIALIAAALGFGGLAGTAAWAAKIVFVVGIILFLVSLFTGRRRP >gi|333596726|gb|GL892086.1| GENE 1804 1921465 - 1922082 721 205 aa, chain - ## HITS:1 COG:STM4561 KEGG:ns NR:ns ## COG: STM4561 COG2823 # Protein_GI_number: 16767802 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Salmonella typhimurium LT2 # 1 205 1 205 205 225 82.0 3e-59 MNMTRLKISKTLLAVTLGSVLVSGSALAETSTMDKAQNTADTAGEKIDSSMNKVGNFMDD SSITAKVKAALVDHESIKSTDISVKTDNKVVTLSGFVESQTQAEEAVKVAKGVEGVSSVS DKLHVRDNKESSVKGYAGDAATTSEIKAKLLADDIVPSRMVKVETTDGVVQLSGTVENQA QSDRAESIAKAIDGVKSVKNDLKTK >gi|333596726|gb|GL892086.1| GENE 1805 1922387 - 1923976 2163 529 aa, chain - ## HITS:1 COG:STM4560 KEGG:ns NR:ns ## COG: STM4560 COG4108 # Protein_GI_number: 16767801 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Salmonella typhimurium LT2 # 1 529 1 529 529 1044 95.0 0 MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSSQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELMDEVENELKIACAPITWPIGCGKLFK GVYHLYKDETYLYQTGKGHTIQEVRIVKGLDNPELDAAVGEELAAQLRDELELVKGASHE FDRELFLSGEITPVFFGTALGNFGVDHMLDGLVEWAPQPMPRKTDTREVEAKEEKFSGFV FKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRIGKDVVISDALTFMAGDRSHVEEAY PGDIIGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLS EEGAVQVFRPIANNDLIVGAVGVLQFDVVVARLKSEYNVEAIYESVNVATARWVECSDVK KFEEFKRKNEVQLALDGGDNLTYIAPTMVNLNLTQERYPDVQFRKTREH >gi|333596726|gb|GL892086.1| GENE 1806 1924069 - 1924746 815 225 aa, chain - ## HITS:1 COG:ECs5332 KEGG:ns NR:ns ## COG: ECs5332 COG1011 # Protein_GI_number: 15834586 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 398 82.0 1e-111 MKWDWIFFDADETLFTFDSFGGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITA LQLQHQRFDVWAERLNVSPGVLNEAFLNAMADICAPLPGAVSLLDSLKGKAKLGIITNGF TALQQIRLERTGLRDHFDALVISEQVGVPKPDPRIFDYALAQAGNPDRDRVLMVGDTAES DILGGMRSGLSTVWLNAHGRALPEGIEPTWTVTSLNELEQLLCKQ >gi|333596726|gb|GL892086.1| GENE 1807 1924766 - 1925209 696 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146310196|ref|YP_001175270.1| ribosomal-protein-alanine N-acetyltransferase [Enterobacter sp. 638] # 1 147 1 147 147 272 93 4e-71 MNTISSLTTADLTTAFAIETRAHAFPWSEKTFASNQGERYLNLRLDVDGAMAAFAITQVV LDEATLFNIAVDPAYQRRGLGRELLEHLIRELETRDVFTLWLEVRASNVAAIALYESLGF NEATIRRNYYPTAEGREDAIIMALPIG >gi|333596726|gb|GL892086.1| GENE 1808 1925178 - 1925591 461 137 aa, chain - ## HITS:1 COG:ECs5330 KEGG:ns NR:ns ## COG: ECs5330 COG3050 # Protein_GI_number: 15834584 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Escherichia coli O157:H7 # 1 136 1 136 137 197 74.0 4e-51 MTSRRDWQLQQLGITQWALRRPTALRGEIAISIPAHVRLVMVAEALPALNEPLIEDVLRS LKVTRDQVLQLAPESVAMLPPDSRCNSWRIGAVDELPLEGSQISSPALDELKANPKARSA LWQQICEYEHDFFPHDG >gi|333596726|gb|GL892086.1| GENE 1809 1925693 - 1926721 249 342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 333 106 367 371 100 29 3e-19 MSAFTPASEVLLRHSDDFEESRILFAGDMQDDLPARFDCAESRAHTQYYHHWQVLSRQMG ERARFSLAAEQSDIADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGCDIFVVGENRSGVRS AEQMLEAWAPLTKIDSARRCGLYHGRLEKQTTFDANAFWDEYQLDGLTIKTLPGVFSRDA LDTGSKLLLSTLTPHTKGKVLDVGCGAGVLSTVLASHSPKVRLTLCDVSAPAVEASRATL AANGIEGEVLASNVFSDVTGRFDMIISNPPFHDGMETSLEAAQTLIRGATRHLNSGGELR IVANAFLAYPKVLDETFGFHEVIAQTGRFKVYRTVMTRQAKK >gi|333596726|gb|GL892086.1| GENE 1810 1927227 - 1927457 177 76 aa, chain - ## HITS:1 COG:no KEGG:ECL_00781 NR:ns ## KEGG: ECL_00781 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 76 14 89 89 95 80.0 9e-19 MLSKALGSGWGILLPGSIIGGLMFADLPIDIWKAMIVSGLLVTSAMIWHKQLRHYVLLPS CVALISGLLVILMSLK >gi|333596726|gb|GL892086.1| GENE 1811 1927713 - 1928777 910 354 aa, chain + ## HITS:1 COG:STM4551 KEGG:ns NR:ns ## COG: STM4551 COG2199 # Protein_GI_number: 16767795 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Salmonella typhimurium LT2 # 1 351 1 351 354 449 63.0 1e-126 MTSQSWLSLVNKKYQLSLRLFLFLNAASALFSVTNPLYSVRVLSVPLIAVLTISTGLLIW HWKNSTRKINIPVVSAIFGLLWAWQIVSKFLLITHDHATYLMMALLTVLFIGSLAFASNI KAFTLHSFPAFISCLWLSPSENWLRMVYFFALPVVAIGIHHVLQRRNDRFAQELLSELLE ERETLTDLSMMDPLTGLYNRRGLQSRLENLPRPDGGEHFVLLMDIDHFKAYNDHYGHMMG DQALIRVSAAIRDAVRSRDVVARFGGEEFMVLLSNIPLEQARQTAERIRQKVYDLKIPHM FNESVATNVTISIGIAMFEGEDVEGALAKADKALYEAKHMGRNSILLSDELHTA >gi|333596726|gb|GL892086.1| GENE 1812 1928873 - 1929661 647 262 aa, chain + ## HITS:1 COG:STM4550 KEGG:ns NR:ns ## COG: STM4550 COG4114 # Protein_GI_number: 16767794 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Salmonella typhimurium LT2 # 1 262 1 262 262 382 71.0 1e-106 MATRTAHIVEPLLWRAPLSAGETTLADAIREKIAVTRAHLLDFIKLDEAPPHHALTLSQW QRPAELRSLLATYSDHIYRNQPTLTRENKPLLSLWAQWYIGLMVPPVMLALLTQETMLDL SSEHFHVEFHETGRAACFWIDVHEDPSAKHLSSQARMERLITSALVPVIDALEATGEING KLIWSNTGYLIHWYLTEMKPLLGDEKVDALRQSCFFARQLSDGRDNPLYRTVVPREGLLV RRTCCQRYRLPDVQQCGDCTLK >gi|333596726|gb|GL892086.1| GENE 1813 1929745 - 1931091 1546 448 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 8 432 7 427 446 426 52.0 1e-119 MSANHAAFNLIFRFVENYVSPIAGRISSQRHVMAIRDGFISAMPFMIVGSFLLVFAYPPF SPDTTWGFARAWLDMAKQFEGQILTPFDMTMGVMSLYICAAIAYNLGKHYVKTHQLDPFM CAMLSLMAFLLVAAPKTKGALPVDSLGGTGIFTAILVAIYCVEMMRFLKAHNIGIRLPDQ VPPMIKNSFDLLIPVLVVVLTLYPLSLLIQSQFGMLIPQAIMSIFKPLVSAADSLPAILL AVLIGHLLWFAGIHGAAIVSGMLQMFWLTNLGANQTALAASLPLPHIFMEAFWTFFIVIG GSGATMGLVFCYLRSRSAHLRSIGRLSVVPSIFNINEPVIFGTPIVMNPVFFIPFLLAPM VNAVLAWAAMKFDLIGRVISVVPWTAPAPVGAAWALGWDFRAAILVLVLACVSAIIYFPF FKVYEKQLLQQEAEEAQRNGEEENQQVA >gi|333596726|gb|GL892086.1| GENE 1814 1931420 - 1931878 401 152 aa, chain + ## HITS:1 COG:STM4549 KEGG:ns NR:ns ## COG: STM4549 COG2606 # Protein_GI_number: 16767793 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 151 1 151 152 253 85.0 7e-68 MSLQSVQQFFAEHAPDIEIIELNQSTATVALAAAAHNVEPGQIAKTLSLKIKNDVILVVA KGDARLDNKKLKETFGAKARMLSSDEVVTLTGHPVGGVCPFGLENPLSVYCDITLKQYAE VLPAAGAIHSAVRISPDRMAELTAAKWVDVCI >gi|333596726|gb|GL892086.1| GENE 1815 1931916 - 1932602 416 228 aa, chain - ## HITS:1 COG:STM4548 KEGG:ns NR:ns ## COG: STM4548 COG2197 # Protein_GI_number: 16767792 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 214 1 214 224 197 52.0 2e-50 MEKTTATRHIAVIESCSMSAVGLKHLFAMPALSHYQVHLFSRFDSFKVALSDISFYAVIY SLSDEREERRNCLACLRDLTFTHSDVQRIVLASDEMEARLVSHLSPSRLHGIISKSVPLK QLMEGLETLLSETHQVNDNMYNHWCVSQNRMLSPTERAILRYMSSGFSIPEIAAQLERNI KTIRAHKFNAMVKLGVNSDVGLLDAADILAHLPAREVRRSALTVPSFS >gi|333596726|gb|GL892086.1| GENE 1816 1932548 - 1933234 292 228 aa, chain - ## HITS:1 COG:STM4547 KEGG:ns NR:ns ## COG: STM4547 COG2197 # Protein_GI_number: 16767791 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 213 18 231 241 266 62.0 3e-71 MQNGLGSVMSRHFPDFEITYCRSMQELTLLQLRRAGVVIADISGEYRNPRGTLEQYYGLM NQYRDIHWIFLVSRPLYPLAVELLMRPESTLLSDMEPIEGVINAIRAGSERAERISQTLL IPETPDIEEESEQMIALTHSERKVLRLLGKGWGINQIATLLNKSNKTISAQKNSAMRRLS LRSNADMYAWISSTQGMRELSLMSAYGEFEEWKRPLQQDISPSSKAAQ >gi|333596726|gb|GL892086.1| GENE 1817 1933674 - 1934450 376 258 aa, chain + ## HITS:1 COG:ECs5324 KEGG:ns NR:ns ## COG: ECs5324 COG2966 # Protein_GI_number: 15834578 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 257 22 276 277 446 85.0 1e-125 MQADRSTQRATTRLCIQCGLFLLQHGAESALVEELSTRLGLALGMDSVESSISSNAIVLT TIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHKLLDLREIEKRFNQIKPLRYPRWL VVLMVGLSCACFCKLNAGGWDGAVVTFFASSIAMYVRQLLTHRQLHPQINFCITAFVATT VSGLLLRQPFFASTPTVAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLA TCIGVVMAMTLWGLRGWA >gi|333596726|gb|GL892086.1| GENE 1818 1934441 - 1934914 572 157 aa, chain + ## HITS:1 COG:STM4545 KEGG:ns NR:ns ## COG: STM4545 COG3610 # Protein_GI_number: 16767789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 251 88.0 5e-67 MGVMDFLLALAQDMLLAALPAVGFAMVFNVPQRALPWCALLGAIGHGSRMVMMTSGFNIE WSTFIASMLVGSIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISHFGYSEP QMILLLSNFLKASSIVGALSIGLSIPGLWLYRKRPRV >gi|333596726|gb|GL892086.1| GENE 1819 1934959 - 1935411 466 150 aa, chain + ## HITS:1 COG:RSp1106 KEGG:ns NR:ns ## COG: RSp1106 COG1846 # Protein_GI_number: 17549327 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 4 149 5 150 153 155 59.0 2e-38 MDAKTNDTTHALLLDNQLCFALYSANLALNKLYRQLLAPLNLTYPQYLVMLVLWEQDDIT VSDIGERLFLDSATLTPLLKRLESAGLIFRQRSRQDERQVAVTLSDAGRELQQQAVAIPH AVGCAAKCDTDTLLALKQQLELLRQQLHRA >gi|333596726|gb|GL892086.1| GENE 1820 1935497 - 1935925 570 142 aa, chain + ## HITS:1 COG:RSp1107 KEGG:ns NR:ns ## COG: RSp1107 COG1764 # Protein_GI_number: 17549328 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Ralstonia solanacearum # 1 141 1 141 141 191 68.0 4e-49 MSLEKVVYTAKAKATGGRDGRATSSDGVLDVKLGVPKEMGGMGGEVTNPEQLFAAGYSAC FLGAMKFVAARDKFALPKDAFIEGEVGIGPLPTGFGIEAKLNIHVEGMDAAEAKKLVDAA HIVCPYSNATRGNIDVTLKIIA >gi|333596726|gb|GL892086.1| GENE 1821 1936049 - 1936594 480 181 aa, chain + ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 85 153 197 266 346 85 58.0 5e-17 MSSRILTTSIAGIDAFMRDPRGVLTHAEGGTLAVFADNAPAFYAVTPERLAQLLEIEAKL SRPASDVMLDNQFFDEPTSAPVAIPMGKFPMYAGWQPDADFQRQAALWGIALSQPATPEE LAAFTAYWQAEGKVFHHVQWQQKLARSLQINRASNNGQPKRDINAFSEPDKKIPDGFRGA K >gi|333596726|gb|GL892086.1| GENE 1822 1936591 - 1937328 849 245 aa, chain + ## HITS:1 COG:STM4543 KEGG:ns NR:ns ## COG: STM4543 COG1484 # Protein_GI_number: 16767787 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 438 91.0 1e-123 MKNVGDLMKRLQKMMPANVKPAFTTGEELLAWQKEQGEIRAAALARENRAMKMQRTFNRS GIRPLHQNCSFENYKVESQGQMNALNQARQYVDEFDGNIASFIFSGKPGTGKNHLAAAIC NELLLRGKSVLIITVADIMSAMKDTFSNRETSEEQLLNDLSNVDLLVIDEIGVQTESRYE KVIINQIVDRRSSSKRPTGMLTNHNIDEMTRLLGERVMDRMKLGNSLYVIFDWDSYRSRV TGKEY >gi|333596726|gb|GL892086.1| GENE 1823 1937413 - 1937895 591 160 aa, chain + ## HITS:1 COG:no KEGG:ECL_00763 NR:ns ## KEGG: ECL_00763 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 160 1 160 160 193 90.0 2e-48 MKKQFFISILTGALLVTGAAQAASWQESLSSAASELTKESGTSQGGLSASSLTGLLSNSS QSLSAGTMNNAAGILEYCAKQKLASVTDTENIKNQVLGKLGLDTQEQKADTNYMDGIQGL LNAQNGQQLNLSTLGNSSLAKQVKTKACDLVLKQGVNFLS >gi|333596726|gb|GL892086.1| GENE 1824 1938179 - 1940458 2522 759 aa, chain + ## HITS:1 COG:STM4541 KEGG:ns NR:ns ## COG: STM4541 COG1368 # Protein_GI_number: 16767785 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Salmonella typhimurium LT2 # 12 755 3 746 750 1332 85.0 0 MSLVLFLASIGVYAWKAGRHTWWFVATLVVLGIFIVLNITLYASDYFTGDGINDAVLYTL TNSLTGAGVGKYILPGLGLVVALVGIFAALAWVLRRRRHRPHHHGYSLLALCLALASVDA SPAFHQITELVKSQSRDGDPDFVTYYKEPAKKIDNPKLNLVYIYGESLERTYFDNEAFPN LTPELGALKNQGLDFSHTMQLPGTDYTIAGMVASQCGIPLFAPFEGNASASMSSFFPQNI CLGDILKNSGYENYFMQGANLRFAGKDVFLKSHGFDHLYGSEELKTTVADPAYRNDWGFY DDTVLDETWKKFEELSRAGKRFSLFALTVDTHHPDGFVSRTCKRQRYDIDGQNNKSFSAV TCSQEHIAALIEKIKASPYFKNTVIVVSSDHLAMKNSAWDELNKQDRSNLFFVLRGDKPQ QEVIAAKRNSMDNGATVLDILGGDNFIGLGRSTLSGQSLSEIFLNMKEKILAWKPDIIRL WNFPKAIKDFTIDQDKKMIAFSGSHFRLPLLLRVSDNRVEPLPESEYSAPLRFQLAEFAP RDNFVWVDRCYKMGQLWSQSLSLSTDWCVSQGQLGGEQTVQHVDKPQWQGKTAFKDTVID TARYQRNVDLLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEV KIEYTQPLPEKFDLVITARAFGPNANRPIPVRVGDKEQTLTLSNDVTTSTLHFDNPSRSN TLVIVPPDPQSTNEGNILGHSPRKLGIGMVEIKIVKNNG >gi|333596726|gb|GL892086.1| GENE 1825 1940639 - 1941277 442 212 aa, chain + ## HITS:1 COG:no KEGG:CKO_02620 NR:ns ## KEGG: CKO_02620 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 6 209 53 254 262 110 32.0 6e-23 MLTGYKFESIRALRSEHVIAWEVLSTALPHVDLEDYFCSMPATQRKAHFFAQLRHAMFCE AGDKYYLNATTDLLLETDFLDRLKEETPSPERLAVEVTDLYRLVHLDDTQSRTLRTCIAT LHRWGIEVWADDVCEDILPDLLASQIRFCGVKIDKHTFWGGRTEREKFLQLTRQCKRLAS KVLIEGIETAGDFALARSSAADYGQGYLWGRP >gi|333596726|gb|GL892086.1| GENE 1826 1941423 - 1941923 543 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237731359|ref|ZP_04561840.1| ## NR: gi|237731359|ref|ZP_04561840.1| predicted protein [Citrobacter sp. 30_2] predicted protein [Citrobacter sp. 30_2] # 13 166 16 161 161 68 31.0 2e-10 MRIIPTAICCSVLLLPAAAIAADNSTASATMHVSLEVVKSCTLNANDLNFSRHGTDEAGE IQARTQVDIVCTNGTPFTLSATSSDSSENGTFWLKPENGETGAQKIAWKLFADEGKQTQI TGTEGLTDTGNGMKQEETLYGVIDAGALTTAQAGTYSDDVTLNLEY >gi|333596726|gb|GL892086.1| GENE 1827 1941965 - 1942705 466 246 aa, chain + ## HITS:1 COG:AGl297 KEGG:ns NR:ns ## COG: AGl297 COG3121 # Protein_GI_number: 15890260 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 199 21 208 238 117 37.0 3e-26 MLALLSRYALAATLQVAPVTLDMQSGQRATAVYLTNSGKTAIHAQIRVYEWSQKNGKDVL EATEKVVSSPAMTSLAPGQQQLVRIIVMQPGAHKQEQSYRLVIDELPDAASRAANPSAVH FLLRYSIPVFIAGSQTTPLSQDDLSCEQAEIPATLRCYNAGNRHIRLSHLQVLTASGQVA GSVKGLAGYVLPGQTALVPLKQTPRHSLSALRAYINDDRHASQIPLRPLAARAPALATAH SVSSPG >gi|333596726|gb|GL892086.1| GENE 1828 1942623 - 1944917 1929 764 aa, chain + ## HITS:1 COG:RSp1498 KEGG:ns NR:ns ## COG: RSp1498 COG3188 # Protein_GI_number: 17549717 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Ralstonia solanacearum # 21 705 30 719 786 286 31.0 1e-76 MPARSPCVRSLLALLLWLPLILSAARAESPVDAVQWLAITVNHAPRGELWACRVAGDALW IGRSDIAKLGLRAPEGRSEWVELTSLPGLKVSLDVLSQQVTINAEAKALEGQQHVTFGRP PSQYRYPEAQPISAFTLGYALYASESEGKRQLNAQTTLSASGPLPGLFSSSFSSHAGEEN SAGRPTHTRLETRWQRDNADSLTSLALGDSITTGTRWSRQVRFGGLHWARNFELNPQLNT EPRSRYSDTAILPSTVDLYIDGLKQSSQQVTPGDFLLDTLPSFTGSGQAQVVITDINGQR RTVQLDLYGAPGMLAEGLSSGSLDIGWMRQNYTLRSDDYAASPMLDAGWRYGVNNQLTLA LHTEQQRKLRNVGTGADWLISPTAGILSPHIALSDSAYGKGMQWGLGWQWNGSGTGLSAS TVRTDAAFADNARMSGAAPVRRSDSVWVSHAFPHFGTLGAGWVQQNIQGNRQRYLNASWS VSLPAHLSTTLSYTRSFTDASSNVQLMLSVPLGRQNTLSVQASRDRPRMDYRHQPDNQAG GWSWQLGQGFGQNRERYADAGYLGRAGEWHVGLEQSANAGNQYASAEGSLTLLDNSLHAL RYSQQGLPLVSTRGIGHVPVMLENRRAGETDEQGYLLLTDLPRYHNSKVTIDPLELPPDV IAPVTDMYARPGNGNAVKVDFNVHRAMTVQARLVDRHRQPLPLGSVVSTPHGATIVGRDG FIWLEDPPLPGELVVKTGEGECRVTLPAPRTSSTVINIGEQLCH >gi|333596726|gb|GL892086.1| GENE 1829 1944950 - 1945864 761 304 aa, chain + ## HITS:1 COG:no KEGG:ACIAD3333 NR:ns ## KEGG: ACIAD3333 # Name: not_defined # Def: putative lipoprotein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 5 304 8 301 301 83 25.0 1e-14 MKAMAAACWITSPAVINFGNVVAGNAASTHTEVKFSCQADNYGTAEYINVCLSSIDAPPF QMLSTGDQEGKQYTLLFRLLNGLARSQELGPASRGDLIQQTITAGSNASVSGSFPLIATL PAGQSQLLATHYYNYNMNLRIAWHSATRQDALQSCADGSAEGEQVQGGSNAQAEISEGCY IERVTPLNFGTLTSTATLRPTRSTATLTTRCPAGTAFTLAMGKGNHASGDWRQLCNDEGQ CLRYGLWQDAGATQRWGDRSSGDTLNVTNPAGGTQNFTVYGEVPAQPLSGTGEFIDDVIV TLTY >gi|333596726|gb|GL892086.1| GENE 1830 1945993 - 1946733 571 246 aa, chain + ## HITS:1 COG:STM3759 KEGG:ns NR:ns ## COG: STM3759 COG3710 # Protein_GI_number: 16767043 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 1 114 32 145 285 60 31.0 2e-09 MKYLLADALIYNDEDGIITPVNAPEEDAQILTCTANTILKLLVKHHGNVVERETFLHDVW DRRGLQGSNNSLNQYISILRKMLASLVPDVLFIVTVPKTGFMLCADVTVTTLEEGAPAAE TAKPAWRVRPERLFCGAFTLAIIALCVWITAIKPDAPQSDIHLLTHIGKCPVYTFTPLAD VFHDRAIALAQNLQQDGHLPCLKNSIFYMHIQRTLFYGHEGRLVLSQCSLTHDKASACRT LYYYEW >gi|333596726|gb|GL892086.1| GENE 1831 1946735 - 1947208 467 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260769382|ref|ZP_05878315.1| ## NR: gi|260769382|ref|ZP_05878315.1| hypothetical protein VFA_002440 [Vibrio furnissii CIP 102972] hypothetical protein VFA_002440 [Vibrio furnissii CIP 102972] # 53 155 3 105 109 66 31.0 6e-10 MKHKKVWLILVLNLLLLGAALAWYVYTPPLSVACDGNLTFSDRRDNHEFTFDGEIIMHFH PDKTGYITLNGNVENAPKSWEVSRQEMFKWRHVEGALYEIIIQKVERFSHDAMPPGVFEK YVAGLTLGKKRLLTIERTPHKALVISNFYSPVLVCSE >gi|333596726|gb|GL892086.1| GENE 1832 1947238 - 1947744 429 168 aa, chain + ## HITS:1 COG:PA2271 KEGG:ns NR:ns ## COG: PA2271 COG0454 # Protein_GI_number: 15597467 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 1 168 1 171 171 141 50.0 6e-34 MNMTIRPTTRDDVTALPAIERAAGQRFRDVPELAWLADGEVISVEDHLGYAARGSSWLAL ADDRPVGFILTEAHPSSLFIVELSVHQDWQGHGLGRQLIARAAAHARSLGLNSLTLTTFR DVPWNAPFYARLGFEMMTTLTPELRQKREEEAAHGLAYGSRCAMRLPL >gi|333596726|gb|GL892086.1| GENE 1833 1947881 - 1949545 2295 554 aa, chain - ## HITS:1 COG:ECs5315 KEGG:ns NR:ns ## COG: ECs5315 COG0840 # Protein_GI_number: 15834569 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 790 86.0 0 MLNRIKIVTSLMLVLAIFGLLQLTSGGLFFNALKHDKENFTVLQTIRQQQSTLNGSWVAL LQTRNTLNRAGIRYMMDQNNIGSGSTVNELMQIASASLKQAEKNWADYEALPRDPRQSDA AALEIKRNYDIYHGALAELIQLLGAGKINAFFDQPTQSYQDGFEKQYVNYLQQNDALYQT AVEDSNSSYRQAIWVLISVLVAVLVVIVAVWLGIRQALISPMNRLIDSIRHIASGDLVKR IDVEGSNEMGELADSLRHMQGELVRTVGDVRNGANAIYSGASEISMGNNDLSSRTEQQAA SLEETAASMEQLTATVKQNAENARQASNLALSASETAQKGGKVVDNVVQTMRDIAGSSQK IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSL IEDSVGRVEVGSTLVESAGETMGEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEM DRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRIQQEQMKAREFASAKSVAAPVVAR KPATADAGDNWETF >gi|333596726|gb|GL892086.1| GENE 1834 1949629 - 1950069 592 146 aa, chain - ## HITS:1 COG:STM1100 KEGG:ns NR:ns ## COG: STM1100 COG1846 # Protein_GI_number: 16764458 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 139 1 139 146 199 79.0 2e-51 MHDSLTIALLQAREAAMGYFRPIVKRHNLTEQQWRIVRVLAEHPSMDFHDLAFRTCILRP SLTGILTRMERDGLVLRLKPVNDQRKLYVSLTKEGNALYQRAQAQVEEAYQQIEAEYTPE KMKQLTALLEEFIELGNRHIAARDEE >gi|333596726|gb|GL892086.1| GENE 1835 1950339 - 1951616 1602 425 aa, chain + ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 1 425 1 429 429 671 85.0 0 MKGTVFAVALNHQSQRTAWAEAFEKAPYNAPPKTAVWFIKPHNTVIRAGEPIPFPQGETV LSGATVALVVGKTASKVRVEEAAAYIAGYALANEVSLPEESFYRPAIKAKCRDGFCPLGE PVAVDNVDNLTIITEINGREADHWNTADLHRNAAELLSALSEFATLNPGDAILLGTPQSR VEIRPGDRVRILAEGFPPLENPVVNERDVAIAQRTPPHATLFALGLNYADHASELDFKPP TEPLVFIKAPNTFNGDGQTSVRPNNVDYMHYEAELVVVIGKTARKVSEAEAMEYVAGYTV CNDYAIRDYLENYYRPNLRVKSRDGLTPISPNVVPKEAIPDPHNLTLRTFVNGELRQEGT TADLIFSIPFLIAYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVS EETAK >gi|333596726|gb|GL892086.1| GENE 1836 1951613 - 1953079 1931 488 aa, chain + ## HITS:1 COG:STM1102 KEGG:ns NR:ns ## COG: STM1102 COG1012 # Protein_GI_number: 16764460 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 488 1 488 488 983 96.0 0 MKKINHWINGKNVAGSEYFHTTNPASGEVLAEVASGGEAEIHQAVAAAKEAFPKWANLPM KERARLMRRLGDLIDQNVPDIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNG KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE RASRLRVGDPTDPNTQIGALISQQHWEKVSGYIRLGIEEGATLLAGGPDKPTDLPAHLKG GNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVS KVLRLARNIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD HPIPKWGI >gi|333596726|gb|GL892086.1| GENE 1837 1953082 - 1953933 953 283 aa, chain + ## HITS:1 COG:STM1103 KEGG:ns NR:ns ## COG: STM1103 COG3384 # Protein_GI_number: 16764461 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 573 93.0 1e-163 MGKLALAAKITHVPSMYLSELPGKNHGCRQSAIDGHKEISKRCRELGVDTIIVFDTHWLV NSAYHINCADHFSGVYTSNELPHFIRDMTYDYDGNPELGQLIADEAVKRGVRAKAHNIPS LKLEYGTLVPMRYMNADKHFKVISISAFCTVHDFADSRRLGEAIVSAIEKYDGTVAVLAS GSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWREGQFKEFCSMLPEYADYCYGEGN MHDTVMLLGMLGWDKYDGKVEFLTELFASSGTGQVNAVFPLPA >gi|333596726|gb|GL892086.1| GENE 1838 1953943 - 1954323 562 126 aa, chain + ## HITS:1 COG:STM1104 KEGG:ns NR:ns ## COG: STM1104 COG3232 # Protein_GI_number: 16764462 # Func_class: E Amino acid transport and metabolism # Function: 5-carboxymethyl-2-hydroxymuconate isomerase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 231 88.0 4e-61 MPHFIAECTDNIREQADLPGLFAKVNEALAATGIFPIGGIRSRAHWLDTWQMADGRHDYA FVHMTLKIGAGRSLESREAVGEMLFELIKTHFAELMAERYLALSFAMEELDPTLNYKQNN VHALFK >gi|333596726|gb|GL892086.1| GENE 1839 1954470 - 1955273 978 267 aa, chain + ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 517 92.0 1e-146 MLDKHTHTLIAHRLHQAEQSREQIRAISLEYPEITIEDAYAVQREWVNLKIAEGRVLKGH KIGLTSKAMQASSQISEPDYGALLDNMFFHDGSDIPVDRFIVPRIEVELAFVLAKPLRGP NCMIFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP DELDLRWISALLYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEPGQIILGGSF TRPVPASRGDTFHVDYGNMGSISCRFV >gi|333596726|gb|GL892086.1| GENE 1840 1955284 - 1956081 1020 265 aa, chain + ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 250 1 250 263 427 90.0 1e-119 MQNAFKAALKAGRPQIGLWLGLTSSYSAELLAGAGFDWLLIDGEHAPNSVQTILTQLQAI APYPSQPVVRPSWNDPVQIKQLLDVGAQTLLVPMVQNADEARLAVSATRYPPAGIRGVGS ALARASRWNRIPDYLHQANDAMCVLVQIETRMALKNLPQILDVEGVDGVFIGPADLSADM GFAGNPQHPEVQAAIEQAIAQILSAGKAPGILMANEQLAKRYLELGARFVAVGVDTTLLA RGAEALAARFIEQPVTSVNNNKSVY >gi|333596726|gb|GL892086.1| GENE 1841 1956103 - 1957449 1794 448 aa, chain + ## HITS:1 COG:STM1107 KEGG:ns NR:ns ## COG: STM1107 COG0477 # Protein_GI_number: 16764465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 13 430 25 449 458 587 72.0 1e-167 MTTSTLQDKKAIEHRAINKLFRRLIVFLFILFVFSFLDRINIGFAGLTMGKDLGLTSTMF GLAATLFYVTYVLCGIPSNIMLAKVGARRWIAGIMVVWGIASTCTMFATSPETLYVLRML VGIAEAGFLPGILVYLTWWFPAYHRARANALFMIAMPVTMMLGSILSGYILAMDGLWNLK GWQWLFLLEGLPSVVLGVVTWFYLNDTPDQATWLDDDEKQALKAMIAREQEVAIAQSVTP RSTLREVLTPAVLLYTLAYFCLTNTLSAINIWTPQILQSFNTGSSNIVIGLLAAIPQFCT ILGMIWWSRRSDRLKERKKHTILPYLFAAAGWMLASATDHSLIQLLGIIMASTGSFTAMA IFWTTPDQVISLQSRAVALAVINAIGNVGSAVSPLLIGILRDATGSFSSGLWFVAGLLVV GALVLTRIPMTQRDQQRNDHVPEPHRQH >gi|333596726|gb|GL892086.1| GENE 1842 1957421 - 1958347 967 308 aa, chain + ## HITS:1 COG:STM1108 KEGG:ns NR:ns ## COG: STM1108 COG2207 # Protein_GI_number: 16764466 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 294 1 294 298 531 86.0 1e-151 MCLSPIANIDISKEYDESLGTDDVHYQSFARMAAFFGRDMQAHRHDQYFQMHFLDTGQIE LQLDDHRYSVQAPLFVLTPPSVPHAFITESDSDGHVLTVREDLIWPLLEVLYPGTREAFG LPGICLSLADRPDELAALKHYWQLIARESTEQLPGREYTLTLLAQAVFTLLLRNAKLDDH ASGGMRGELKLFQRFNQLTDAHYHEHWTVPEYASELHLTESRLTDICRRFANRSPKRLIF DRQLREARRLLLFSDSTVSEIAWQLGFKDPAYFARFFNRLTGCSPSAYRAQKVPVSPHPG PLPTGERV >gi|333596726|gb|GL892086.1| GENE 1843 1958532 - 1960094 2043 520 aa, chain + ## HITS:1 COG:STM1099 KEGG:ns NR:ns ## COG: STM1099 COG2368 # Protein_GI_number: 16764457 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 1071 97.0 0 MKPEDFRADAKRPLTGEEYLKSLQDGREIYIYGERVKDVTTHPAFRNAAASIAQMYDALH KPDMQDTLCWGTDTGSGGYTHKFFRVAKSADDLRQQRDAIAEWSRLSYGWMGRTPDYKAA FGCALGANPAFYGQFEQNARNWYTRIQETGLYFNHAIVNPPIDRHKPADEVKDVYIKLEK ETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENPDFALMFVAPMDAEGVKLISRAS YEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPWENVLIYRDFDRCRRWTMEGGFARM YPLQACVRLAVKLDFITALLKKSLECTGTLEFRGVQADLGEVVAWRNMFWALSDSMCSEA TPWVNGAYLPDHAALQTYRVMAPMAYAKIKNIIERNVTSGLIYLPSSARDLNNPQIDQYL AKYVRGSNGMDHVERIKILKLMWDAIGSEFGGRHELYEINYSGSQDEIRLQCLRQAQSSG NMDKMMAMVDRCMSEYDQHGWTVPHLHNNTDINMLDKLLK >gi|333596726|gb|GL892086.1| GENE 1844 1960112 - 1960621 655 169 aa, chain + ## HITS:1 COG:STM1098 KEGG:ns NR:ns ## COG: STM1098 COG1853 # Protein_GI_number: 16764456 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Salmonella typhimurium LT2 # 4 169 5 170 170 293 85.0 1e-79 MQTEERLRFRDAMASLSAAVNVVTTEGDAGRCGITATAVCSVTDTPPSIMVCINANSAMN PVFQGNGKLCVNVLNHEQEIMARHFAGMTGMAMEERFALSCWQKGPLAQPVLKGALASLE GEIAQVQTIGTHLVYLVEIKNIILSSEGHGLIYFKRRFHPVMMEMEAAV >gi|333596726|gb|GL892086.1| GENE 1845 1960954 - 1963107 2966 717 aa, chain + ## HITS:1 COG:ECs5313 KEGG:ns NR:ns ## COG: ECs5313 COG1966 # Protein_GI_number: 15834567 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 717 6 721 721 1282 94.0 0 MDTKKLLKHVPWALLGIIGAFCLAVVALRRGEHVSALWIVVASVSVYLVAYRYYSLYIAQ KVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTL WLLAGVVLAGAVQDFMVLFISSRRNGSSLGEMIKEEMGRVPGTIALFGCFLIMIIILAVL ALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFLRPGRVGEVSVIGIVLLVASIYFGGV IAHDPYWGPALTFKDTTITFALIGYAFISALLPVWLILAPRDYLATFLKIGVIVGLAIGI VIINPELKMPAVTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLMANET DARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENTALI MAQLKDASAHAAATVSSWGFVISPEQIMQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKV LPWADMGFWYHFGILFEALFILTALDAGTRAGRFMLQDLLGNFVPFLKKTDSLVAGVLGT AGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLVKMKRTKYIWVT VVPALWLLLCTTWALGLKLFSTNPQLEGFFFMANQYKEKIAAGGADLTAQQIANMNHIVV NNYTNAGLSILFLVVVYSIIFYGIKTWMKVRNAEGRTDKETPYVPVPEGGVKTSSHH >gi|333596726|gb|GL892086.1| GENE 1846 1963204 - 1963407 289 67 aa, chain + ## HITS:1 COG:ECs5312 KEGG:ns NR:ns ## COG: ECs5312 COG2879 # Protein_GI_number: 15834566 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 67 1 67 67 120 89.0 6e-28 MFGNLGEAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMTYTEFFRERQEARYGGSG EGGVRCC >gi|333596726|gb|GL892086.1| GENE 1847 1963418 - 1964371 1254 317 aa, chain + ## HITS:1 COG:STM4530 KEGG:ns NR:ns ## COG: STM4530 COG0523 # Protein_GI_number: 16767774 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Salmonella typhimurium LT2 # 1 317 1 318 318 581 91.0 1e-166 MTPIAVTLLTGFLGAGKTTLLRHILNEQHGFKIAVIENEFGEVSVDDQLIGDRATQIKTL TNGCICCTRSNELEDALLDLLDSRDRGDIDFDRLVIECTGMADPGPIIQTFFSHEILCQR YLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGASEKLRERLTRINSRA PIYTVTHGDIDLAQLFNTNGFMLEENVTAKPRFHFISDKQNDVASIVVELDYPVDISEVS RVMENLLLSFADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGEEAPHSVMVFIG IQLPEEEIRAAFAGLKK >gi|333596726|gb|GL892086.1| GENE 1848 1964603 - 1966405 701 600 aa, chain + ## HITS:1 COG:RSp0128_2 KEGG:ns NR:ns ## COG: RSp0128_2 COG0210 # Protein_GI_number: 17548349 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Ralstonia solanacearum # 214 578 13 372 392 248 39.0 3e-65 MAGEKRLARLLEGGLSEQCTCWYDTRMGDKDDHPDFVILSPDKGLLFIEVKDWFITKIKS ANKTHIHYETKNGIEPLKNPLEQVRQYTFNIVNSLKKDPLLRQQQGDHEGGFVMPYGYGV YLSNITRAQLEKSFLPEELNEILPASQVICKDELTEFMTRDQISARLESLLKHRFVHHTT PQQLDRIRWHLYPDARINSSVTRVELDNFTLHTPDIVCMMDTKQEQLARSMGTGHRVIHG VAGSGKTLILLHRCIELANNIENTKPILVVCYNITLAKKLKAQLEQHTLRLPVDVTHFHA WCYQQLNAHRRLPPRSKNFIELMENALTVAFEEGVIKSEQYSAVLIDEGHDFKPEWLRIL AKMPDNKDSALLFLYDDAQSIYQKKKALDFTLSSVDIKAQGRTTILDTNYRNTRQILHFA SSVAFNYLNNHIEASLKYQQPAAGGLPGKYPALVSFDNQDEEITHVLDWVTEQRQQGVAW SEIAILCPSTYSISGMLAPRLEARKIPYQMIVSSDDKKHWSPQNDFLCVMPLPSSKGLEF NSVAIMDAAKERDSEDLSDDIKRLYVGFTRARQNLLVTMHGTGNLRDHLVETWEKSVKMV >gi|333596726|gb|GL892086.1| GENE 1849 1966470 - 1967828 1692 452 aa, chain - ## HITS:1 COG:alr4238_3 KEGG:ns NR:ns ## COG: alr4238_3 COG4222 # Protein_GI_number: 17231730 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 157 328 3 182 205 63 29.0 1e-09 MKRKIIPVLIGCALSFSGLAAQPTAERYVVTFPEGSHIKYSGAFASAFPNGLPVGIGSGL LFTGKQGDALTFATVTDRGPNADSPKMGKNDAKIFVTPDFAPLLMTIRVQNGKAEAIDAR PLHDDKGEINGLPLQSGVIGSTNEIALSDTLKVLKGDNRGLDTEGITPDGKGGFWLCDEY GPFLINIDSKVKILAIHGPQAAEGEKSIAGGLPNVIKWRQANRGFEGLTRMPDGRIIAAV QSTLDIDGKSKKQALFTRLVSFDPATGKTAMYGYPIDSAAYSKNSDAKIGDIVALGNHTI LLIEQGEDKNDAMRNLIYRVDLSKASDLAAFDKPGEYPEFDDEKTLAQRGITLAAKTQVV DLRALGWQQEKAEGLALIDGKRLAVANDNDFGVKVAMQNPVEGKKLKDYRVNAEGTLTLD DKPVETTLSVKPLKKPESDSELWIVTLPEALK >gi|333596726|gb|GL892086.1| GENE 1850 1968240 - 1968785 778 181 aa, chain + ## HITS:1 COG:no KEGG:Kvar_4483 NR:ns ## KEGG: Kvar_4483 # Name: not_defined # Def: YfaZ family protein # Organism: K.variicola # Pathway: not_defined # 1 181 1 181 181 290 91.0 3e-77 MKKLNILILSALTAVSGSALAMGGSIEQGKNFTNLNLEMGKSSSGLYAESNWLKNTDDGT QTGGVGAGYNLEVGPVMLNAGAKAIYIGPKKGDNGVAFPIGGGVNVALTDSIHVFGEGYV APDGLNNSVKNYVEANGGVSWTPVKPVTLKVGYRHVSVDGKDGRPNHTLIDGAYVGGGVS F >gi|333596726|gb|GL892086.1| GENE 1851 1968961 - 1970331 1922 456 aa, chain - ## HITS:1 COG:STM4519 KEGG:ns NR:ns ## COG: STM4519 COG1012 # Protein_GI_number: 16767763 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 806 89.0 0 MAYQTVNPATNQLIKEYPSHTDADVEAALKAADALYHSDWAKGDISQRLPVLHKLADLID ERVEDLAKIASQEMGKLIEQSRGEVKLCAQIARYYADNAKQFLAPVKYDSELGEAWVEHQ PIGVLMAVEPWNFPYYQLMRVLAPNLAAGNPVIAKHASIVPHCAETFAQLVREAGAPEGA WTNLFISSDQVANIIADDRVQGAALTGSEKAGSVVAAQAAKHIKKSTLELGGNDVFVVLD DADLEKAVKIGVNARLNNAGQVCTAAKRFILHEGIADAFLSKFTEAFKQVKIGDPLDEST TLGPLSSKDALETLTRQVDEAVKNGATLHYGGKPVQRDGSFFEPTILTNISRDNPAYFEE FFGPVAQIYVVKNDDEAVALANDSHYGLGGAVFSQDIERAKKMASRIETGMVYINWLTDT AAELPFGGVKRSGYGRELSDLGIKEFVNQKLVVVRK >gi|333596726|gb|GL892086.1| GENE 1852 1970647 - 1971918 1515 423 aa, chain + ## HITS:1 COG:STM4516 KEGG:ns NR:ns ## COG: STM4516 COG2733 # Protein_GI_number: 16767760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 421 1 421 423 655 80.0 0 MEKHTELKRAKLLALSLLLIAVAAFIITLFLPQTFWVRGVKAIAEAAMVGALADWFAVVA LFRRVPIPFISRHTAIIPRNKDRIGDNLGQFVQEKFLDTQSLVDLIRRYEPAQMIGTWFS QPDNAQRVGQHLIQVMSGFLELTDDGRIQRLLKRAVHKAIDKVDLTETSAVMLESMTKNN RHQVLLDAIINRLITLIQRESTREFIADQIVHWLKTEHPRKAMVLPTEWLGDQSAEMVSN AVNTLLDDISHDRTHQIRQAFDRATIKFIDNLKNDPEMTAKAENIKHYLKNDEAFNRYLG EMWADLRQWLKNDMQSDDSRVKQRIANAGLWFGETLTNDASLRASLNEHLEQAAHRVAPD FATFLTRHISDTVKSWDAKDMSRQIELNIGKDLQFIRVNGTLVGGTIGLILFLLSQLPAL LGH >gi|333596726|gb|GL892086.1| GENE 1853 1971915 - 1972991 1408 358 aa, chain - ## HITS:1 COG:no KEGG:ECL_00736 NR:ns ## KEGG: ECL_00736 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 358 1 358 358 614 96.0 1e-174 MSISTLARVFTPHGNIVYTANDFRQTLRIVFAGMIALSISSFYNTSYGVFFVVYPIMLLS LVPVFNRHVAKQFIFSASLNCVEMVFIIGYLSQWPIIMTLVVFALYVMRFRFMSKGPLFL FGSMGVVCQSVMLNFMSYPTTNWHTLLFSNIEASVMAVCLSALMNYLLPDVEPRKPPPLI EKDDARVRHESLLSGTVATLIFVVFQISDLSDSLSALMAGILILFPMHYRGSVISSIWRV VGVVLGCLYILVVQLILYDHSSHMLLMMPLIGLGLAFGARLHVMEKVGAGVGFASITTIG IMFGQNMHPDSDLVFSDLYRITSVTFALVVTLTMVFLVHLILNRFEATRYVIAPPKAD >gi|333596726|gb|GL892086.1| GENE 1854 1972981 - 1974045 1379 354 aa, chain - ## HITS:1 COG:PA3360 KEGG:ns NR:ns ## COG: PA3360 COG1566 # Protein_GI_number: 15598556 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Pseudomonas aeruginosa # 1 354 1 352 352 297 50.0 2e-80 MTPEQKFARWVRVSIASFLLMFVYFIVADIWIPLTPDSTVMRVVTPVSARVSGYVAAVHV HNNSQVKKGDLLFELDATPFRNKVEAAQIALEQARLSNDQLDAQIAAAQASLKTAVLTAR NDKVTFDRYQKLSTLQNVSQADLDKVRTTWQSSEQSVSSLQANIHNLRIQRGERDEHRNV TLQKYRNALDEAELNLGWTKVYAEADGTVSNLQLSPGFYASSGSAALALVNTRIDIVADF REKSLRHTHQGTDAAVVFDAFPGQVFRAHVTSSDAGILAGQEAVNGQLSEPETSNRWVRD AQRMRIHVALDEALPKPLPTGARATVQLYNSEGPFARFFSGMQIHLVSLLHYVY >gi|333596726|gb|GL892086.1| GENE 1855 1974045 - 1974515 460 156 aa, chain - ## HITS:1 COG:STM1444 KEGG:ns NR:ns ## COG: STM1444 COG1846 # Protein_GI_number: 16764792 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 11 151 6 146 146 80 32.0 1e-15 MSEEDLFSRRPMGMRMAMIVRQWRAVIDDAILDTGLTQSSWTVMMQLHQLGDNVSVSELA EVQGIELPPLMRTLTQLEKQGYLLRTVSPYDKRIRLLTLTPEGKAILERLTRVIETYQAR VSQNISPEHIDIFSATLNQIACNLRTIREEDNKTEK >gi|333596726|gb|GL892086.1| GENE 1856 1974662 - 1975357 468 231 aa, chain - ## HITS:1 COG:BMEI0150 KEGG:ns NR:ns ## COG: BMEI0150 COG0640 # Protein_GI_number: 17986434 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Brucella melitensis # 18 222 29 235 243 162 44.0 6e-40 MLKTSLPTDNSAALEQAIAAVAAAMADPSRVKMLCALMDGRAWTATELSTVADVAPSTAS GHLARLVEGKLIICLSQGRHRHYRLAGHDVAALVEQMMGISWSRITPPETTAPKAMREAR TCYDHLAGTVAVQIYDFMQTEGWLEADGSALTPYGGEQFLKLGIALNPKPRRKACCACLD WSERRFHLGGEAGALLLDYLESKGWIQRVVGYREVVVTATGKAAVKRLFSR >gi|333596726|gb|GL892086.1| GENE 1857 1975332 - 1975727 444 131 aa, chain - ## HITS:1 COG:no KEGG:ECL_00732 NR:ns ## KEGG: ECL_00732 # Name: not_defined # Def: amino acid-binding ACT domain protein # Organism: E.cloacae # Pathway: not_defined # 1 130 1 130 132 216 82.0 3e-55 MYDVHVIFSDRPGELARFGQLLGRNGVGLEGGGVFGTEAHFLVEDGGKARRVLMEAGFTV QAVRRPVIRKLKQERPGELGEIAAALAARGVSVLTQYSDHANHLILVTDDDKLAAEITEP WAAHVKDKLTD >gi|333596726|gb|GL892086.1| GENE 1858 1975720 - 1976043 275 107 aa, chain - ## HITS:1 COG:BMEI0152 KEGG:ns NR:ns ## COG: BMEI0152 COG2329 # Protein_GI_number: 17986436 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Brucella melitensis # 1 105 1 105 120 113 56.0 8e-26 MIAVLFEAKAAPAHQARYLQLAAELKPLLANIDGFIDIERFQSLTTDGKILSLSWWRDEE AVRRWKQNVFHQAAQAEGRESIFSFYRIRVAQLVREYSSETGGHADV >gi|333596726|gb|GL892086.1| GENE 1859 1976196 - 1977611 1609 471 aa, chain - ## HITS:1 COG:SA1924 KEGG:ns NR:ns ## COG: SA1924 COG1012 # Protein_GI_number: 15927696 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Staphylococcus aureus N315 # 1 471 1 472 475 392 44.0 1e-109 MHTIEQIFINGEFVTPHGTEWFDLYNPATAQVIGQVRLADEVDAARAVAAAKAAFPAWSQ TTKQERIAALKRMHAAVVARHDDLLEAVIEEYGAPASRSAWMARYPAEVIAQAIEALEAF EFVTSAGAATVQMTPLGVAGLITPWNSDAGFICGKLATALAAGCTAVIKPSEMSALQTRI VTEALRDAALPPGVFNIVTGRGETVGETISRHPDVAKISFTGSTNTGKAILRNAAESFTR VTLELGGKSPTILLDDVDLAQAIPLVIQAGFMNSGQACVAGTRILIPQARKAEIETALAQ AVAAVRSGDPRDSATEVGPMVSEKQWQRVQGYIRKGIEEGARLLAGGEGRPEGTQDGWFV RPTLFADVNNQMAIARDEIFGPVLCVIPYRDEAEAIAIANDTEYGLSAMVLGGDADRARR VAQQIVSGRVLVNTLAHEPKAPFGGFKHSGVGREMGEWGIRAFMEPRSIVG >gi|333596726|gb|GL892086.1| GENE 1860 1977712 - 1978614 956 300 aa, chain + ## HITS:1 COG:AGpAbx130 KEGG:ns NR:ns ## COG: AGpAbx130 COG0583 # Protein_GI_number: 16119467 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 299 13 306 313 247 44.0 2e-65 MHRSGLTELEVVMAVVRRGSFRGAAQELGMSATAVSNAIAGLESRLDTRLFNRTTRSVAL TDAGQRYVARIGPALQEIRLASEEIHSDTGEPAGTLRLNVPNHIGTLFLDQLLIDFMIRY PKMRVETVSEARMIDIVAEGYDAGIRLEESVPQDMIAVPLTGEIRQLVTATPDYFARHGT PQTPDDLLSHQGIGMRMAHGGIYRWELARRGETYALAVPPRFATSDLFAAIRAVKAGLGV GFLPELYIREALERGELVSVLNDWVQPFAGLRLYYPGHRHVPPGLRALVAMIRERGIIPG >gi|333596726|gb|GL892086.1| GENE 1861 1978601 - 1979080 718 159 aa, chain - ## HITS:1 COG:mll1641 KEGG:ns NR:ns ## COG: mll1641 COG2128 # Protein_GI_number: 13471615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 1 138 1 138 152 133 49.0 1e-31 MSTRVNHHKATPALANALSALSMEVAKTSIDPALKHLIDIRVSQLNGCTFCLDMHSKEAK IAGERELRLYHLAAWRESPLFSAREKAALAFTEALTQPGVHGVSDALYRSVAEHFSDVEI SELNFAIVAINAWNRLGITSRMEPGSLDAAYGLNKANLE >gi|333596726|gb|GL892086.1| GENE 1862 1979183 - 1980571 1475 462 aa, chain + ## HITS:1 COG:ECs3534 KEGG:ns NR:ns ## COG: ECs3534 COG1167 # Protein_GI_number: 15832788 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli O157:H7 # 3 442 2 428 444 303 40.0 4e-82 MKPGYHEIYTRYRDNITRGVLKPGDKVPAIRVLAEELKVARKTVETAYAILTGEGYLVSQ GARGTRVNPDLLLPAQNAPAEQATGTLPASLISQRERAGFLRPGIPALDSFPYKKWLLLA GQATRAMRQEEMLNPPVLGWYPLREAIARYLNISRGLSCTAEQVLITSGYSGSLRLILDT LASRSDKVVFEDPGYFMGQQLLKRIVPRLHTVPVDRAGMDTDYLLRNHHDARFAIVTPSH QSPLAVTLSLPRKQQLLDWASQNEAWIIEDDYDGEFHYTRKVLPSLKSLDRHDRVIFMGT FSKTIMPSLRMGYVVMPASTVGAFTDCADILTSGQPVLTQKILTAFLNEGHFFRHLKKMR ALYQTRRDWMIAALREVYGDLFFTEQNDGGMHIVAFLAKGSADHEIARCWQEQQLQVNAL SAWYRGSGKRYGLVMGYNNVRSYQEALDLLERPKRQTQELLS >gi|333596726|gb|GL892086.1| GENE 1863 1980657 - 1980818 233 53 aa, chain - ## HITS:1 COG:no KEGG:ECL_00724 NR:ns ## KEGG: ECL_00724 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 53 1 53 53 89 90.0 4e-17 MEFYENRSKRPFIAFVWVAKTLRNWYRINRTRRILSQMSDEQLKDVGLSRYDV >gi|333596726|gb|GL892086.1| GENE 1864 1980854 - 1982410 1437 518 aa, chain + ## HITS:1 COG:yjiR KEGG:ns NR:ns ## COG: yjiR COG1167 # Protein_GI_number: 16132161 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 48 517 1 470 470 766 73.0 0 MENGHYNTDSKTAFVYHTDPLKRYLHGGLPINLYWFNALYGENKGYSMTRYQHLANLLAE RIEQGLYRSGERLPSVRTLSQEHGVSISTIQQAYQILENLQLITPQPRSGYFVSKRKAQP PVPAMTRPVQRPVDVTQWDEVMMLLDARADKEMISFGGGSPDINQPSLKPLWREMSRIAQ HNPGEMLSYDVLDGRLELREQIARLMLDGGSTVAANEIVITNGCHGALSIALLSVCKPGD IVAVESPSFHGTMQMLRGFDIKAIEIPTDPETGISIEALELALEQWPIKAVILVPNCNNP LGFIMPEARKKQVLALAQRHDIVIVEDDIYGELAAEYPRPRTIHSMDIDGRVLLCSSFTK TVAPGLRVGWIVPGRYYDRVMHMKYAAGGFNVPGTQMAVAAFIRDGHYHRHVRRMRQIYQ QNMETYTCWVRQYFPAEICVTRPQGSFLLWVELPETVDMVCVSKQLCRLKIQAAAGSLFS ASGKYRNCLRINVALPPTDKNREALKKMGEAIVIAMEE >gi|333596726|gb|GL892086.1| GENE 1865 1982519 - 1982752 286 77 aa, chain - ## HITS:1 COG:CC1532 KEGG:ns NR:ns ## COG: CC1532 COG3798 # Protein_GI_number: 16125779 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 1 76 47 122 124 65 46.0 2e-11 MVDKSAIKDHTQVVASCGTHVGVVDHVDGERIKLAKSDPESGGKHHFIPLGWVDKVEDNK VVLTKNHKEVFAEWQEA >gi|333596726|gb|GL892086.1| GENE 1866 1982948 - 1983157 203 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295098458|emb|CBK87548.1| ## NR: gi|295098458|emb|CBK87548.1| hypothetical protein ENC_44360 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 9 69 1 61 61 97 96.0 4e-19 MATNEEVFMTIRNNRAEISLALGEAVLDIVQKGHEVSRENLAQAMKNKAEKERDDERLLN YWKACNMLV >gi|333596726|gb|GL892086.1| GENE 1867 1983204 - 1984325 1483 373 aa, chain - ## HITS:1 COG:ycfD KEGG:ns NR:ns ## COG: ycfD COG2850 # Protein_GI_number: 16129091 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 372 4 375 376 506 63.0 1e-143 MAYQLNLNWPEFLEKYWQKQPVVLKNAFPNFVDPITPDELAGLAMEPEVDSRLVSHANGK WQASNGPFEHFDNLGETGWSLLAQAVNHWHMPAAELVRPFRVLPDWRLDDLMISFSVPGG GVGPHIDQYDVFIIQGMGSRRWRVGDKLPMRQFCPHPALLHVDPFEPIIDEDLAPGDILY IPPGFPHDGFTHETALNYSVGFRGPNGRDLISSFADYALENDLGGEHYSDPDLTCREHPG RVEQYELDRIRQMMIDMISKPDDFTKWFGSFVSTPRHELDIAAAEPPYSAEEVLDALQGG ETLSRLSGLRMLNINGSFFINSEQLETVDANAADALCRYTELGQAELGEALNNPAFVDEL TGLINQGYWYFDE >gi|333596726|gb|GL892086.1| GENE 1868 1984460 - 1985065 984 201 aa, chain - ## HITS:1 COG:lin1103 KEGG:ns NR:ns ## COG: lin1103 COG0740 # Protein_GI_number: 16800172 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Listeria innocua # 12 196 3 187 190 239 67.0 3e-63 MHYTLKSSDDKEKAEGTNGAGALQQKLLESRSIVISGEINQELAQKVITQMILLQSVSND PIKLYINSQGGHVEAGDTIHDFIKFIRPDVHVIGTGWVASAGITIFLAAKKEHRYSLPNT RFMIHQPLGGVRGQATDIEIEAREIIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPA EALDYGIVGKLITHYDELNLD >gi|333596726|gb|GL892086.1| GENE 1869 1985366 - 1985983 558 205 aa, chain + ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 196 15 207 218 156 43.0 3e-38 MEHIVYVVDDDDTVRQSVVGLLESADIHALGFSSAEAFLSYPFEDLPSCVILDMQMPTIT GFDVADALKASGREIPIIFLTGHGTIPMSVRAIKGGAYEFLTKPVESSALIGSIESALRL AQHNAARVKEHYALKQRHMSLTPREREVLELAISGKLNKQIAAELGVSEITVKVHRRRVM EKMQVRSVAELVRAVERLTKHQPAE >gi|333596726|gb|GL892086.1| GENE 1870 1985987 - 1991572 5253 1861 aa, chain - ## HITS:1 COG:all2282_2 KEGG:ns NR:ns ## COG: all2282_2 COG3899 # Protein_GI_number: 17229774 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Nostoc sp. PCC 7120 # 319 1195 1 898 899 268 25.0 9e-71 MNEHTSPAFWPARGSLHEGRAFVLKEDVIFTVLAQEDGISWMNGRHPQSGGSFIIATAVS DEDEERATRRLKNEFALRDRLHDGWAIRPVASTQYRGRFALVYAPFCFELLACRAGKAIS GIARFIEMAIRLCGPLRQMHLHNLIHGDIKPGAIFVHHDATCRLCSFGLSCDTSDAFSRT PLSASGGTPAYMSPEHTTRTQRAVDSRSDLYSLGIVLYELLTGRLPFELSADDQTNWAHY HIASQPLAPGRVRPDVPGMLSTIILKLLEKNPENRYQTVDGLIADLRRCQATLTAEGEIV DFIPGQQDHSPAIQLADALFSAHPQASDVIAAFEQVSQSGAPELVTIGGPSGIGKSSVIA TTLKSLQQRKVLLAVGKVDQYSPTLPYGVLSSAFRTLALHLLGLPGGEVATWKIRLSRAL EGYEELAVSLVPELNLLLENKPRFSADTFSIDARARFSHMVLALVKTFATQGAPLVLLLD DVQWIDAASLQTLDHLLRTCGAIPLLVVVAHRDLSSLSDATLQTALASLPEAAQHATTIV PQPLSVKAVARWLGGIFHVRSTGTADLATLIHEKTGGNPLFVQEFFRRIVDDGLVVHNKY QGKWHYDLQAIRARHYTENVVTLVLEQLEEMPDETRRLLGSIACLGCTGELEMLCRVVGQ SAAEIRYALHPAVTAQLIVLTEKEYAFTHDRVQEAAFALLDEGEKSHLHLTTASLLADAV RQTAGNELLFRAVHHVSAALDCIQPAPQRQRFRELSLQAARRAKRTGDYLSALSYIQTAR ALGNAGPVSDFMLDIEEAGCEFALGHLERTRALCDAILGSPGGLTEKALAANLLAEVYMR QSEIRLALEASLCWLGVFGIQISRYPENAECDEAWQLFCQRTADAPQNPFSQLKLMESAE TEAVMNLLYSASIFASFTCPRLHFLLLCRMMHLTLDHGITGASTTAMAWFGVLIGHRYAE YRLGFEYGTLARELVNRHGYDAYEAKTLLPLDQLSVWTQPLSYTIECAKACFTSAVTHGD MTMACFAACHQIINFLSRGDHLDGVLTSIDRGLAFVHKTDFQDIETVLHIQRRYVEFLRT PVTGTWSAAQALPDDLLPAPPEQAPDQTSTMLFWYWLYRGMAHFTCGEYADAQADLERAG WYAWSAPGHIHLLDYHFYSALALSRQLTPETFSADYRRSIHHHYDKIALWARINPGTFAD KEALIYAEIVRLDGMNSIALEQYEKAVRLSREGGFNPINALAHELAGRFSLACGYPTASD AHFRGAIAAWGRAGAQAKVRQLEQDFPHLLASGQSRAYDTAAFAQNEVIRDLQSVIKASR ALSEEINLERLIENLMTLLLERAGAQRGLLLRVSENHIPEIEASAWTRTDGVRVRILKAS PMATDMPLSVLAAVIRTGQEIRTGKPEEFHPFSQDPYLVTSGAAVMCVPMFKQARLVGVL YLENRLMPEVFTAEHSRVVSLLGAQAAVSLETARLYAELLAENIQRRRVEKELRASQTSL MLGEQISHTGSWRWELVQDLMFMSEEYARILGLPEQQKMISMAEFLTFVHEDDYGRISTL VNQSVRDGLSMRAEFRIIRTDGSVRYILGIGDPVGVGSEVNEYYGIITDITSQRAAEDAM RVAQADLARVSRATTVGQLTSSIAHEINQPLMSIVSNAGASLRWLNRDPARLDKVREGLE EIAAEGERAGEIIRSIQSLTRKQDPTFTRIDLHFLIHHIIMLSRSELELRHISVDYLLNA DNSFIIGDSVQIQQVLLNLVMNAMEAMAEVTDRPCSITISTANCAEGKVIFEIADTGSGI EPEHTERIFDSFYSTKAQGMGMGLTISASIIERHRGKLSARRREPYGTVFTFALPLAGQE E >gi|333596726|gb|GL892086.1| GENE 1871 1991582 - 1991962 383 126 aa, chain - ## HITS:1 COG:AGl220 KEGG:ns NR:ns ## COG: AGl220 COG0784 # Protein_GI_number: 15890220 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 125 7 123 124 80 37.0 6e-16 MTLPWRIAIIDDERSVRSGLSNLLQSEGYATDTFDSAEVFLSHPLALSGASLVITDIKLR GMNGIELFEKLRLLATPPPPILFISGHADENMQRYALSLGAAAFLRKPINIDILLDHIQR ELTRRQ >gi|333596726|gb|GL892086.1| GENE 1872 1991986 - 1992246 310 86 aa, chain - ## HITS:1 COG:RSc0241 KEGG:ns NR:ns ## COG: RSc0241 COG4317 # Protein_GI_number: 17544960 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 80 1 80 96 95 62.0 2e-20 MKAWIISLVCGVAAGVIYALLDVHSPAPPVVALLGLFGMLVGEQLIPIGRRLVSREPLTL AWFRHECVPKISGTAPPAPAKESRDA >gi|333596726|gb|GL892086.1| GENE 1873 1992243 - 1992464 309 73 aa, chain - ## HITS:1 COG:no KEGG:ECL_00714 NR:ns ## KEGG: ECL_00714 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 73 1 70 70 77 76.0 2e-13 MSTGLISLAAGVLIGLMYAVLKVRSPAPPALALIGLLGMLAGEQAMRHLLSRDNPADVQV TIPHVQPPNGASS >gi|333596726|gb|GL892086.1| GENE 1874 1992526 - 1993212 1160 228 aa, chain - ## HITS:1 COG:RSc0242 KEGG:ns NR:ns ## COG: RSc0242 COG1335 # Protein_GI_number: 17544961 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Ralstonia solanacearum # 1 227 1 227 228 392 81.0 1e-109 MTTSKLEVLTPANCQMIFIDHQPQMAFGVQSIDRQVLKNNTVALAKAAKVFNIPTIITTV ETESFSGNTYPELLDVFPGQDILERTSMNSWDDQKVRDALKANGKKKVVVAGLWTEVCNN SFALCAMLEGDYEIYMVADASGGTSKEAHDFAMQRMIQAGVIPVTWQQVMLEWQRDWARK ETYTAVMDIVREHSGAYGMGVDYAYTMVHKAPSRQKSEHRTLAPVPAR >gi|333596726|gb|GL892086.1| GENE 1875 1993434 - 1995305 2346 623 aa, chain + ## HITS:1 COG:PA2699 KEGG:ns NR:ns ## COG: PA2699 COG1574 # Protein_GI_number: 15597895 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pseudomonas aeruginosa # 7 623 3 612 612 966 75.0 0 MVTPGKADLILVNGQFHTVDRENPLAEAVAVRDGKFLEVGTVAEVMQHHCDATKVVDLKG HTAIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKEQALSTPSPQWVRVVGGWS EFQFAERRMPTLDEINDAAPDTPVFILHLYDRALLNRAALKVVGYTKETPNPPGGEIQRD ANGNPTGMLIARPNAMILYSTLAKGPKLPLEQQVNSTRQFMRELNRLGLTSAIDAGGGFQ NYPEDYEVIAELHEKKQMTIRIAYNLFTQRPGHELEDFEKWTDMLTPGQGSDFFRHNGAG EMLVFSAADFEDFLEPRPDLAPGMEDELERVVRHLVEHRWPFRLHATYNESISRMLDVFE KVNRDIPFNGLHWFFDHAETVSQANIDRIKALGGGIAVQHRMAFQGEYFAERYGIEATRH TPPVAKMLETGVPVGLGTDATRVASYNPWTALYWLVSGRTVGGMQMYDHSARLDRDTALM LWTQGSAWFSSEQNQKGQIKAGQLADLAVLSKDYFRVPEEEIKGIESVLTVVNGDIVYAA GAFGPLAPPAIPVLPEWSPVVKVPGHYRSAPPQAARVGMSVAHHCSGPCGVHSHQHDFAR TSAMPVSDDNAFWGALGCSCFAF >gi|333596726|gb|GL892086.1| GENE 1876 1995305 - 1995712 508 135 aa, chain + ## HITS:1 COG:RSc0240 KEGG:ns NR:ns ## COG: RSc0240 COG2259 # Protein_GI_number: 17544959 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 13 129 28 144 145 128 60.0 3e-30 MKQNDASPRVDPGLFFLRLTGSLLLLYVHGLPKVLHFSEELTRIEDPFGFGPYASLIPAI VAEVICPLFIIAGVYTRLACLPIIAVLLVAMLAVHPNWSIAEGQFGWLLLIIFTTLALTG PGQWRVQRKTTERFA >gi|333596726|gb|GL892086.1| GENE 1877 1995709 - 1997328 1948 539 aa, chain + ## HITS:1 COG:PA2701 KEGG:ns NR:ns ## COG: PA2701 COG0477 # Protein_GI_number: 15597897 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 17 534 3 521 529 377 46.0 1e-104 MTQVNDVRDAHVETTPAPAVSPWQPLSQPVFRMLWIATVVSNVGSWMSDVGINWSMLTLS ADPLDIALVQAASSLPMFLFALPSGVMADIVDRRKYLLFSQLWVFIAAAGLTLLSFTGHV TPTVLLVATFLLSVGAAMSSPPFQAIVPDLVSKPELGSAVALNSLGVNISRAIGPALGGF LLSLAGPWMVFALNALSVMGVAWVLWRWRPAPSVQRLPPEHFFSAVRSGIRYVHAAPVLR NVLVRTVAFFVFGSAGWALLPLVARRELGLGPAGYGVMLACIGLGAIAGAILLPRLRQRL NADRLMVAASLTFAITMLALAFVRHFWLLNLFEFFTGFAWIAVLSTLNLGAQRSAARWVK ARALAVYLTVFFGSMTAGSAVWGQIASQFGTPTSLVVATLGMVLASTTVFRWKLEKDPDL NLDLSGQPLDGVEIELPNERGPVLVSHEYIIDPQNAKAFLQAVHELRRVRRRAGAMSWAV YEDIERPGLFIETFLMGSWIEHLRQQERHTMNDLLLQSRVLAFHQGTTSPAIRYLVAPV >gi|333596726|gb|GL892086.1| GENE 1878 1997359 - 1998180 1320 273 aa, chain + ## HITS:1 COG:MA0993 KEGG:ns NR:ns ## COG: MA0993 COG0596 # Protein_GI_number: 20089870 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Methanosarcina acetivorans str.C2A # 1 272 1 273 273 293 51.0 3e-79 MATFKAKDGTQIYYKDCGAGKPVLFSHGWPLDGDMWDSQLNFLAERGYRTIAFDRRGFGR SDQPWNGYDYDTFASDINDLITTLDLRDVTLVGFSMGGGDVTRYINNYGSERVAGLALLG AVTPIFGKSDSYPEGVDQSVFSGIRDGLRKDRAQFISDFATPFYGTNAGQTVSAGALTQT LNIALLASLKGTIDCVTAFAETDFRPDMAKIDVPTLVIHGSNDQIVPFETTGKLAAEMIN NATLKVYDNAPHGFALTHQDQLNEDLLAFVKSL >gi|333596726|gb|GL892086.1| GENE 1879 1998211 - 1999338 1242 375 aa, chain - ## HITS:1 COG:no KEGG:ECL_00707 NR:ns ## KEGG: ECL_00707 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 358 1 358 362 717 96.0 0 MKEQWSREQAQAWYQQKGWLCGFNYLPSTAVNWTDIWQEETFDAATIKRELGWAADAGYN TLRINLPFIVWEHDRDGLMARIDRFLTIADAHGFSTMLTLMDDCGFSGDEPYLGPQKPPV PGKHNSQAAASPGRDKVCNPDCWADIERYIRDVVRQFREDKRVLLWDLYNEPGNRGIFAT GTQEVQYDAKLETCAHKLMKLAFQWVREEDPTQPLTVCAWRVPPEEEGETFFHHPLDQTA LALSDVVSFHAYTHTGRMTAMIQQLQKLGRPLFCTEWLARHVGSTIEEQLPLMYAAKVAP YQWGLVRGKTQTWLPWPVVMKESTDYCRLWFHDVFEENGIPFSHREIALMQYLRKIAPGG GCALSGLQNQPLQAG >gi|333596726|gb|GL892086.1| GENE 1880 1999450 - 2000460 1095 336 aa, chain + ## HITS:1 COG:YPO0758 KEGG:ns NR:ns ## COG: YPO0758 COG1609 # Protein_GI_number: 16121073 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 9 333 1 326 331 236 40.0 4e-62 MKRKTKVTMNDIARAAGVSQATVSLVLNQSRNIKLSDDTRQRVINVATDLGYDRLPAVHA PRNQEEIALLVSSMQSVDPFIDAISQAREAAWRNETLLTVYDYGDDIELALNIIRQLEKR NCIGIILASPVTNVVDMTAFQECTRIPRVLLNQRDPGSPLLPSFIPDDYANAFQVTKHLI ACGATRIAHITGESWMEASRQRLAGYRAALQQAGLACNDGLVRQTNWQFSESFTATTSLL ELAERPDAIFCASDWLAIGCYQALAVHGVRIPQDMLLAGYDDQKISEQLTPPLTSIQLPY SELGRLAAEYLCNQEDAATHVTLAGRLKVRASSSGA >gi|333596726|gb|GL892086.1| GENE 1881 2000653 - 2001654 1280 333 aa, chain + ## HITS:1 COG:STM4508 KEGG:ns NR:ns ## COG: STM4508 COG0180 # Protein_GI_number: 16767752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 4 333 5 334 337 575 86.0 1e-164 MNAPTILTGDRPTGPLHLGHFVGSLRQRVALQETHNQFVLIADLQGLTDNGSNPQKIRDN IPEVLADYLAAGIDPNLTTICLQSALPALAELTMLYMNIVTVARVERNPTVKNEIAQKGF ARSLPVGFMAYPISQAADITAFKAECVPVGDDQLPMIEQTNEIVHKMNSLLPAPVLRHCK AMLSDTSRLPGIDGSAKMSKSLGNTLHLSASEETIHRAVSAMYTDPNHLKVSDPGQIEGN VVFTYLDAFHPDKGKVAAMKAHYQAGGLGDRVCKNELEGCLQELIAPMRERRAMYMRDKG ELMAMLKRGTERAQGVTQETLREVKVGLGVPVF >gi|333596726|gb|GL892086.1| GENE 1882 2002243 - 2002614 212 123 aa, chain + ## HITS:1 COG:no KEGG:Pvag_3751 NR:ns ## KEGG: Pvag_3751 # Name: not_defined # Def: hypothetical protein # Organism: P.vagans # Pathway: not_defined # 1 120 1 122 124 134 58.0 1e-30 MNPTLSQVIEVVRQSSGHHRKRIDENTLIEADLDICGMDGDDLIEDCEEAFGVTLVTEED GYKKTFSLAENEFLFSTEGIDYLGICRLIRRLRGIPEPVIRDLTVGELHAVLVKTVKEQV HHD >gi|333596726|gb|GL892086.1| GENE 1883 2002673 - 2003140 283 155 aa, chain - ## HITS:1 COG:no KEGG:ECL_00703 NR:ns ## KEGG: ECL_00703 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 149 1 149 151 306 95.0 2e-82 MAATNFKPEFTVCKTESDAFTDMIENRELVRKNSARRLHGNPPNAAPVHPRAETPQDSAA CCELYARIDMKYLLLGGDWLTRAGFINGMPVKIRAMKDCIVITPQHTRELWGCLEGMSVV NINKQKVAQWLKTFPGALNDTGDVPMIKRGGGKAV >gi|333596726|gb|GL892086.1| GENE 1884 2003441 - 2004310 602 289 aa, chain + ## HITS:1 COG:Z5892 KEGG:ns NR:ns ## COG: Z5892 COG3440 # Protein_GI_number: 15804871 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Escherichia coli O157:H7 EDL933 # 1 279 12 291 294 459 77.0 1e-129 MASSKTLEQAIADITIWRKGEQRAPHKPLLLLYVLANYQQGHARLFDYGTEVHEKLLSLL ERFGPQRKAHYPNMPFWRLKGDGFWDLKNTEFCSTTGSKQPPVKELVEHNVAGGFDEEHF VLLSKNKNLSGLLAQQILEAHFPESIQEEIADEMGFDIQQISKVRDPLFRQQVLRAYNYE CAICGFNMRHDNASVGLEAAHIKWKQFGGPCEIPNGLALCAIHHKAFDKGSIGLDESMRV LVSEAVNGNGIVGRLFWDFAGKQIALPMVKGNYPGEGFVEWHRREVFRG >gi|333596726|gb|GL892086.1| GENE 1885 2004680 - 2007013 776 777 aa, chain - ## HITS:1 COG:Z0339_2 KEGG:ns NR:ns ## COG: Z0339_2 COG3378 # Protein_GI_number: 15799978 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 EDL933 # 370 773 1 404 408 784 93.0 0 MSGMKVSQAVKAARGHWAQILPALGVNILKNRHQPCPVCGGKDRFRFDDQEGRGTWFCNQ CGAGDGLALVTRALNVDISEAADRIHGLTHDLSIVNSEVRTLTADTDSGKDAAAALAARL LQASRESAGNTYLTHKGFPEHICHELTSAHKAGGVMFRPGDLIVPLYNADGELVNIQLIS GNGSKCFLKGGQVKEAYHLIEGGGSSVRRIWIAEGYATALTIHYLTGEAVMVAFSSVNFL SLSSVAHNKYPGYQLIIAADRDLNGSGQNRAETAAKASQCDIVLPPVFGDWNDALTQYGE ESTRKAILEALKPHNASPFDTMSEAEFTAMSVSEKAQRVREHYRDALAVDPNGQLLSRYE SGAWKVISQSDFARDVAALFQRLGAPFSSGKIASLVETLKLIVPQQQNPSRHLIGFRNGV LDTRTGLFSPHCKENWLRTLCEVDFTPPVKGETLETHAPAFWRWLDRAAGHKPAKRDIIL AALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAAL IGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYQNAYSTHIPAVILAVNNNPMRFTD RSGGVSRRRVILHFPEQIAPEERDPQLKDKIARELAVIVRQLMQRFSDPMSARTLLQSQQ NSDEALTIKRDADPAFDFCGYLEALPDTNGMFMGNANIVPRQPRTYLYHAYLVYMEANGF KNTLSLTMFGKGLPVMLKEYGLNYEKRRTNQGMQTNLTLKEESNADWLPKCDEPTIK >gi|333596726|gb|GL892086.1| GENE 1886 2007028 - 2007351 168 107 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5447 NR:ns ## KEGG: ECO26_5447 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 107 1 107 107 197 99.0 2e-49 MKSRTLSLSLRVALYRRAVACAWLSACYQQNRHLQLTLDEIETAIARELEGFYLRQHGQT KGMEIACALLSDLMEYGPLMSCPALSQLGTAVMDELCVRHIKKPVLH >gi|333596726|gb|GL892086.1| GENE 1887 2007348 - 2007572 173 74 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5446 NR:ns ## KEGG: ECO26_5446 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 74 1 74 74 134 100.0 1e-30 MNHAAISYDDILRLKHLRNVGEFVTGMAVLQDCYEKPASAQCEQLVSLIYLMTEQLDGVV QRCQDDLMNMEVVQ >gi|333596726|gb|GL892086.1| GENE 1888 2007572 - 2007901 314 109 aa, chain - ## HITS:1 COG:no KEGG:ECO26_5445 NR:ns ## KEGG: ECO26_5445 # Name: not_defined # Def: putative repressor protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 109 74 182 182 202 100.0 3e-51 MVVRAGQPSGWPVSNKAGIPTPVRVTTHERRNSGGGIYRYLLEVALMATILAPSHPQFIF VFAAVRRAERKPRISMLRIIASNEHHARLSLVHEYVLCLAARLPVREVI >gi|333596726|gb|GL892086.1| GENE 1889 2008117 - 2008377 181 86 aa, chain - ## HITS:1 COG:ECs0299 KEGG:ns NR:ns ## COG: ECs0299 COG3311 # Protein_GI_number: 15829553 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 86 1 86 86 119 76.0 1e-27 MNSISVSTPAPAAPVLPVPAQQERFIRLPEVMHLCGLSRSTIYDLISRDAFPQQISLGGK NVAWVQSEVSAWMAARIAAREQGGHA >gi|333596726|gb|GL892086.1| GENE 1890 2009283 - 2010035 601 250 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5443 NR:ns ## KEGG: ECO26_5443 # Name: not_defined # Def: putative head size determination protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 250 1 250 250 436 95.0 1e-121 MTTVNQISDANITPTLPPKIREAVEKVKAAKAVWQEERRKQTEAAAMTETIRKRQEDTKT ETQALNDEWRNLFRENQGNMTPRMKKLRAEIALGRETLDEFEDLLAAQAAENEFLPWKTA DAANRYISEHNHLIETHAVWLWNEFMKEHGQKLIQILGLLKMTLGRSASSVIGVVHTVND PESVLKQFISEQLTTPALFCNVSSTDDIALPGISIYADDKAIQDARQSPSPAARSRMLKQ RDMAKGGEKE >gi|333596726|gb|GL892086.1| GENE 1891 2010032 - 2010586 126 184 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5442 NR:ns ## KEGG: ECO26_5442 # Name: not_defined # Def: putative polarity suppression protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 184 1 184 184 325 96.0 7e-88 MNTGTITQEALNDYRAAIKSWLTLRNVQSTSQLRLAALLDTEEKPAAYASQLEDLRERLA LLEWQINCAARDGLYAHQIVLESCVTSATENFMSEHGDALTDALAPFLCAPYGLEAAMKI LRTAVARQTEVRTPVIPAAYKSIIDETGLTVDASMRADASASFTPAQHKVFLARLNRLNE KGVC >gi|333596726|gb|GL892086.1| GENE 1892 2010588 - 2010860 117 90 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5441 NR:ns ## KEGG: ECO26_5441 # Name: not_defined # Def: putative transcription activator # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 90 1 90 90 147 97.0 1e-34 MALKCPECGAVAHARTSAYEAPSVKRSWYQCQNLECSCTFTALESVDTIIMKPRRNEQES DKAKMPEKQQQTLNRYGSASKLSNRQQIPV >gi|333596726|gb|GL892086.1| GENE 1893 2012765 - 2013241 -72 158 aa, chain + ## HITS:1 COG:no KEGG:KP1_0578 NR:ns ## KEGG: KP1_0578 # Name: not_defined # Def: putative exonuclease # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 3 150 166 319 329 130 43.0 1e-29 MLDRLPNWDSEQDPLTFTICYKDGKEVNIVDELKKHNIFFSAPLDIDYMMINSFPEIYCE IDSENNERGPEVLKQEKIIENDIIKQVLKDGNKGNKNYKHDNGYLTKFVWYNYRFLGSKS KPASHIRLINKIKGSLVERMPSVLKELVERVGEISHGR >gi|333596726|gb|GL892086.1| GENE 1894 2014302 - 2014901 -253 199 aa, chain + ## HITS:1 COG:no KEGG:KP1_0577 NR:ns ## KEGG: KP1_0577 # Name: not_defined # Def: putative helicase # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 167 356 523 557 105 33.0 1e-21 MLNLYIELNIIDENNDSDNNKLITFIDYFSTTKKATAFNDYKNVLDFITNIIDHIGLNLI KSKWPQHKSVEHTKYIWTELAKQLHKIYSNNIDRETIVMNFCGKQSLKIMNIHKCKGLEY KAVILIGFEDEAFWNYSDDNFEERCVLYVAFTRAKEEILITQSDYRDFISGGRKKTSQEI TSKLRDNLIDKCGFILHLH >gi|333596726|gb|GL892086.1| GENE 1895 2014934 - 2016205 395 423 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 14 407 14 402 406 156 29 3e-36 MCPQMKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFG VWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAANSGAYTFETIAREWHASNKRWSE DHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRY AVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLL TFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLL EQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGES GLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADFLYSNKSRSISPYDFAR EGS >gi|333596726|gb|GL892086.1| GENE 1896 2016547 - 2017269 832 240 aa, chain - ## HITS:1 COG:no KEGG:ECL_00681 NR:ns ## KEGG: ECL_00681 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 240 1 240 240 359 93.0 6e-98 MKKTWISTVVVIVAAAAVAFWVFFDRQRAPEQQMDTALNAMPAWQVIKEQEPALHQRILD QMAALQKAGEPEQQIIDTIQPQILHLQMTRLQNAPDANVVNYMTINMEQTAAIQKVSDDA CFRFLYPMVKGGVNPMRMLDKDLMNRRMQADADMMRAAYGKNRHTVTQAEREAAVEDVRP IMKQLADKYGEDIQLLQMPEKAAGKEKLSCDMVQAMWAKVLALPEQKAAGVIRLAVSELD >gi|333596726|gb|GL892086.1| GENE 1897 2017300 - 2018058 1067 252 aa, chain - ## HITS:1 COG:STM4471 KEGG:ns NR:ns ## COG: STM4471 COG4445 # Protein_GI_number: 16767716 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA # Organism: Salmonella typhimurium LT2 # 1 251 17 267 270 431 82.0 1e-121 MDYPQILAPVLNFLQCPTPQAWIDKARDPANLPLLLTDHMVCELKAAQTALLLVRKYVAD ESGADALLEWLKPYEQFTFRDGPEPDFIALHRQIGKSVMPKTDDPWGQALIDSMVLLIKE ELHHFWQVREAMLARDIPYVKITASRYARGMLKEVRTHEPLTLIDKLICGAYIEARSCER FAALAPFLDDDLQKFYLSLLRSEARHYQDYLTLAQQVSDDDISPRIQLFGEIEATLISTP DHEFRFHSGVPV >gi|333596726|gb|GL892086.1| GENE 1898 2018105 - 2018530 799 141 aa, chain - ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 1 120 138 167 89.0 6e-42 MANPEHLEEQREETRLIIEELLEDGSDPDALYTIEHHFSADDFDALEKMAVEAFKLGYEV TEPEELEVEEGDTVICCDILSEGALKAELIDAQVEQLMNLAEKFDVEYDGWGTYFEDPNG EDGEEGDDEDYVDEDDDGVRH >gi|333596726|gb|GL892086.1| GENE 1899 2018695 - 2019699 1324 334 aa, chain + ## HITS:1 COG:argF KEGG:ns NR:ns ## COG: argF COG0078 # Protein_GI_number: 16128258 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli K12 # 1 334 1 334 334 657 97.0 0 MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKKGKEVQKLTGKNIALIFEKDSTRTR CSFEVAAFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQY AGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALT GLDLRLVAPKACWPEERLVAECSALAQKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEA KEKWAERIALLRGYQVNAQMMALTGNPDVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGME VTDEVFESAASIVFDQAENRMHTIKAVMVATLGE >gi|333596726|gb|GL892086.1| GENE 1900 2019886 - 2020644 1015 252 aa, chain + ## HITS:1 COG:yagI KEGG:ns NR:ns ## COG: yagI COG1414 # Protein_GI_number: 16128257 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 252 1 252 252 466 98.0 1e-131 MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENG KYRLGMKLVERGHFVVGSMDIRQKAKGWLTELSQRTGQTTHLGILDGREGVYIEKIEGKL AAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQYTTFTPATLASREALMSAMA QTREQGYALDREENEQGVRCVAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQA GLQLSRALGYPA >gi|333596726|gb|GL892086.1| GENE 1901 2020649 - 2022259 2070 536 aa, chain - ## HITS:1 COG:yagH KEGG:ns NR:ns ## COG: yagH COG3507 # Protein_GI_number: 16128256 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Escherichia coli K12 # 1 536 1 536 536 1077 96.0 0 MEITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVSM LDMKGNPDSGGIWAPCLSYADGKFWLLYTDVKIVDSPWKNGRNFLVTAPSIEGPWSEPIP MGNGGFDPSMFHDDDGRKYYIYRPWGPRHHSNPHNTIVMQAFDPQTGTLSPERKTLFTGT PLCYTEGAHLYRHAGWYYLMVAEGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPE NPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGIPLLASGGRGYCPLGRETGIARIEWRD GWPYVEGGKHAQLTVPGPQVAEQPTVAQGNWRDDFDGSTLDPELQTLRIPFDDTLGSLTA RPGYLRLYGNDSLNSTFTQSTVARRWQHFTFRAETRMQFSPVHFQQSAGLTCYYNSKNWS YCFVDYEEGQGRTIKVIQLDHNVPSWPLHEQPIPVPEQAESIWLRVDVDTLVYRYSYSFD GETWHTVPVTYEAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCHADFDYFTYEPV >gi|333596726|gb|GL892086.1| GENE 1902 2022271 - 2023653 2057 460 aa, chain - ## HITS:1 COG:yagG KEGG:ns NR:ns ## COG: yagG COG2211 # Protein_GI_number: 16128255 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 1 460 1 460 460 857 98.0 0 MTQLTMKDKIGYGLGDTACGFVWQATMFLLAYFYTDVFGLSAGIMGTLFLVSRVLDAVTD PLMGLLVDRTRTRYGQFRPFLLWGAIPFGIVCMLTFYTPDFSAQGKIIYACVTYILLTLV YTFVNVPYCAMPGVITADPKERHALQSWRFFLAAAGSLAISGIALPLVSIIGKGDEQVGY FGAMCVLGLSGVVLLYVCFFTTKERYTFEVQPGSSVAKDLKLLLGNGQWRIMCAFKMMAT CSNVVRGGATLYFVKYVMDHPEMATQFLLYGSLATMFGSLCSSRLLGRFDRVTAFKWIIV AYSLISLLIFFTPAEHIALIFALNILFLFVFNTTTPLQWLMASDVVDYEESRSGRRLDGL VFSTYLFSLKIGLAIGGAVVGWILAWVNYSASSSVQPVEVLTTIKILFCVVPVVLYAGMF IMLSFYKLTDARVQAISQQLIKHRAAQGEAVPDAATAASH >gi|333596726|gb|GL892086.1| GENE 1903 2023880 - 2025847 2313 655 aa, chain - ## HITS:1 COG:yagF KEGG:ns NR:ns ## COG: yagF COG0129 # Protein_GI_number: 16128254 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli K12 # 1 655 1 655 655 1278 97.0 0 MTIEKIFTPQDDAFYSVITHAAGPQGALPLTPQMLMESPSGNLFGMTQNAGMGWDANKLT GKEVLIIGTQGGIRAGDGRPVALGYHTGHWEIGMQMQAAAKEITRNGGIPFAAFVSDPCD GRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVATCDKGLPATMIALASMHDLP TILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEAAELGCRACASPGGGCQFLGTAG TSQVVAEALGLALPHSALAPSGQAVWLEIARQSARAVSELDNRGITTRDILTDKAIENAM VIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWTRVNRRVPRLVSVLPNGPDYHPTVRAF LAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGENLDWWQTSERRKRFRQCLREQDGVEPDD VILPPEKAKAKGLTSTVCFPTGNIAPEGSVIKATAIDPSVVGDDGVYRHTGRVRVFVSEA QAIRAIKREEIQQGDIMVVIGGGPSGTGMEETYQLTSALKHISWGKTVSLITDARFSGVS TGACFGHVSPEALAGGPIGKLRDNDIIEIAVDRLTLTGSVNFIGTADNPLTPEEGARELV RRQTHPDLHAHDFLPDDTRLWAALQSVSGGTWKGCIYDTDKIIEVINAGKKALGL >gi|333596726|gb|GL892086.1| GENE 1904 2025862 - 2026791 1292 309 aa, chain - ## HITS:1 COG:yagE KEGG:ns NR:ns ## COG: yagE COG0329 # Protein_GI_number: 16128253 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli K12 # 1 297 1 297 309 588 97.0 1e-168 MIQQGDLMPQTALFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEF SQLSAEERKTIARFAIDHVDRRVPVLIGTGGTNARETIELSQHTQQAGADGIVVINPYYW KVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSV AHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDG DVAKAAEYHQTLLQIPQMYQLDTPFVNVIKEAIVLCGRPVSTYVLPPASPLDEPRKAQLK TLLQQLKLC >gi|333596726|gb|GL892086.1| GENE 1905 2027004 - 2027456 681 150 aa, chain - ## HITS:1 COG:ECs5229 KEGG:ns NR:ns ## COG: ECs5229 COG2731 # Protein_GI_number: 15834483 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli O157:H7 # 1 149 4 152 153 261 83.0 4e-70 MIIGNIHHLQSWLPEELRQAIEHVKAHVTDATPTGKHDINGDSLFYLVSEDMTQPFAERR AEYHARYLDIQIVLKGQEGMTFSTLPHGTPDTDWLADKDIAFLPEGEQEKTVVLSEGDFV VFYPGEVHKPLCAVGAPAKVRKVVVKMLVE >gi|333596726|gb|GL892086.1| GENE 1906 2028131 - 2029351 628 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988789|ref|ZP_01820204.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP6-BS73] # 6 406 8 409 409 246 36 3e-63 MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRE QGVEVLLLTDLLTQTLDIAEAKAWLLETQISDYRLGPTFAADVRGWLADMPHRELARRLS GGLTYGEIPAVIKNMVVDTHTANDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRE TNNLRAIYRWHPAFADGDFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQG VEFLANSLFKHRQAERVIAVELPKHRSCMHLDTVMTHIDVDAFSVYPEVVRKDAQCWTLT PDGRGGLLRTQETDLLHAIEKALGINQVRLITTGGDAFEAEREQWNDANNVLTIRPGVVI GYERNVWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLERDGI >gi|333596726|gb|GL892086.1| GENE 1907 2029361 - 2030272 1235 303 aa, chain + ## HITS:1 COG:STM4466 KEGG:ns NR:ns ## COG: STM4466 COG0549 # Protein_GI_number: 16767711 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Salmonella typhimurium LT2 # 1 302 1 302 310 508 87.0 1e-144 MERKPTLVVALGGNALLKRGEPLEAEIQRQNIEQAARTIAGLTAQWRVVLVHGNGPQVGL LALQNSAYDKVTPYPLDVLGAESQGMIGYMLQQALKNNLPQREVSVLLTQVEVDAADPAF SNPTKYIGPVYSEAQAKALAAEKGWVFKADGSYFRRVVPSPQPKRIVESDAITALIQRDH LVICNGGGGVPVVENANGYRGIEAVIDKDLSAALLARQIEADALLILTDADAVYLDWGKP TQRPLAQVTPELLRGMQFDAGSMGPKVAACREFVEACNGIAGIGALNDGAEILAGEKGTL IRN >gi|333596726|gb|GL892086.1| GENE 1908 2030462 - 2031466 1594 334 aa, chain + ## HITS:1 COG:STM4465 KEGG:ns NR:ns ## COG: STM4465 COG0078 # Protein_GI_number: 16767710 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 634 91.0 0 MTINLKNRNFLKLLDYTPAEIQYLIDLAIELKAAKKAGREKQTLVGKNIALIFEKTSTRT RCAFEVGAFDQGAQVTYLGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQAIVEELGE YAGVPVWNGLTDEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAK MGMDIRLVAPKSFWPEAGLVEQCRAIAKETGARITLTDDVEEGVHGTDFLYTDVWVSMGE PKEAWAERVSLMKPYQINADVMKATGNPNVKFMHCLPAFHNEHTKVGREIEMAYGLKGLE VTEEVFESPNSIVFDEAENRMHTIKAVMVATLGD >gi|333596726|gb|GL892086.1| GENE 1909 2031514 - 2032917 1862 467 aa, chain + ## HITS:1 COG:STM4464 KEGG:ns NR:ns ## COG: STM4464 COG1288 # Protein_GI_number: 16767709 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 467 1 467 467 640 80.0 0 MGKFKFPSAYTILFFLIAVVAVLTWIVPAGQYHMAMNEALGKEVPVAGTYAAVASHPQGL VAVLMAPIAGLYDPESGQAGAIDVALFILIIGGFLGIVTKTGAIDAGIERVTTRLRGREE WMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMLAARFDPVVAASTVLLGAGIGTLGST INPFATVIAANAAGIPFTNGIALRLALLVIGWVICVAWVMRYARRVRQDPSLSIVADKQE ENLAHFLGNKGEQSLEFTPVRKIILVIFALAFAVMIYGVAVLGWWMAEISAVFLASAIIV GLIARMSEEELTSTFINGARDLLGVALIIGIARGIVVIMDKGMITHTILHSAEGMVTGLS TVAFINVMYWLEVVLSFLVPSSSGLAVLTMPIMAPLADFANVNRDLVVTAYQSASGIVNL ITPTSAVVMGGLAIARVPYVRYLKWVAPLLGILTVVIMVALSLGALL >gi|333596726|gb|GL892086.1| GENE 1910 2032989 - 2033477 489 162 aa, chain + ## HITS:1 COG:STM4463 KEGG:ns NR:ns ## COG: STM4463 COG1438 # Protein_GI_number: 16767708 # Func_class: K Transcription # Function: Arginine repressor # Organism: Salmonella typhimurium LT2 # 4 160 1 157 162 255 84.0 2e-68 MGTMMDYEEYSPKEQLQLTVCQRLIAEKSYLSQEEIRRDLQERGFETISQSTVSRLLKLL GVIKIRNAKGLKIYSLNPQLRPAPDAARTVSEMVVSVEHNSEFILIHTVAGYGRAVARIL DYHQLPEILGVVAGSSIVWVAPRVVKRTALVHKQINYLLRTH >gi|333596726|gb|GL892086.1| GENE 1911 2033717 - 2034649 1215 310 aa, chain + ## HITS:1 COG:STM4460 KEGG:ns NR:ns ## COG: STM4460 COG0540 # Protein_GI_number: 16767705 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Salmonella typhimurium LT2 # 2 310 3 311 311 579 93.0 1e-165 MNPLYQKHIISINDLSREELELVLETAAKLKANPQPELLKHKVIASCFFEASTRTRLSFE TSMHRLGASVVGFSDSSNTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSG GIPVLNAGDGANQHPTQTLLDLFTIQETQGTLENLNIAMVGDLKYGRTVHSLTQALAKFN GNRFFFIAPDALAMPQYILDMLDEKGIAWSLHASIEEVMGNVDILYMTRVQKERLDPSEY ANVKAQFVLRASDLEGARDNMKVLHPLPRIDEITTDVDKTPHAWYFQQAGNGIFARQALL ALVLNRELAL >gi|333596726|gb|GL892086.1| GENE 1912 2034662 - 2035123 601 153 aa, chain + ## HITS:1 COG:STM4459 KEGG:ns NR:ns ## COG: STM4459 COG1781 # Protein_GI_number: 16767704 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Salmonella typhimurium LT2 # 1 153 1 153 153 290 94.0 6e-79 MTHDNKLQVEAIKRGTVIDHIPAQVGFKLLTLFKLTETDQRITIGLNLPSGEMGRKDLIK IENTFLTDEQVNQLSLYAPDATVNRIDDYDVVGKSRPSLPDRIESVLVCPNSNCISHAEP VSSSFAVKKRANDIALKCKYCEKEFSHYVVLAN >gi|333596726|gb|GL892086.1| GENE 1913 2035198 - 2035584 564 128 aa, chain + ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 220 93.0 6e-58 MTKVLATENAPAAIGPYVQGVDLGSMIITSGQIPVNPKTGEVPADVAAQARQSLENVQAI VESAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNASFPARSCVEVARLPKDVKIE IEAIAVRR >gi|333596726|gb|GL892086.1| GENE 1914 2035721 - 2037169 1675 482 aa, chain + ## HITS:1 COG:VCA0811 KEGG:ns NR:ns ## COG: VCA0811 COG3397 # Protein_GI_number: 15601566 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 2 478 6 482 485 355 41.0 1e-97 MKLSKIALAVATLTVASSALAHGYIESPASRAYMCKLGQNIDCGSVQYEPQSVEKSSGFP TGAMPPDGQLASAGIANYSQLDKQSLNAWTKSPMTAGPHAFVWRHTAPHKTTNWRYYITK QNWNPNKPLTRDQFELTPFCTINGNGQAPAMTKSMTCNVPERTGYQVIYGVWEIADTANS FYQAIDVDFGNGGNVTPDDTPAVISQWNKTLSGQIVGNNLNTGDKVIARFFDANGEVAAM RTEMTISSAAQGDANQWSYDLAQKINAAHSDVRVGVKDEAGEISPVHGANSVFVKDGSAL RSVAISYEEQKAEVHETIAVSGLHYSKIENGSATVTFHVNTTGDVNLEAHVMNHNGAEKG YLKQEMNNASQDVTMTLTDVTAGHHMLKYFATNKDGTLFAQDVLDLMLESDAADSSGPHD FIFPDNVASYKAGTVVLQPKDGKTYQCKPVPFSGYCIQYSPTANQFEPGVGSHWREAWVL KN >gi|333596726|gb|GL892086.1| GENE 1915 2037482 - 2039866 2679 794 aa, chain - ## HITS:1 COG:CC0447 KEGG:ns NR:ns ## COG: CC0447 COG3525 # Protein_GI_number: 16124702 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Caulobacter vibrioides # 22 412 26 424 757 252 38.0 2e-66 MLRYSLLTAGLMLGASAFAAPAGDLPLMPWPAKVERPTTQGVLVIDNQLSVSVSGDDLGD AVNRLRQRIALQTGWTLQPQAEKPDKPTIRIAIAKKVKPQPLPDSDESYKLTVDANGVNI SANTRFGALRGMETLLQLMQNGAENTSLPWVTIEDSPRFPWRGLLLDSARHFIPLPDIKR QIDGMAAAKLNVLHWHLTDDQGWRFTSKRYPKLIQLASDGLFYTPEQMREVVRYAAERGI RVVPEIDMPGHASAIAVAYPELMSAPGPYAMERHWGVLKPVLDPTKEATYAFADAMVSEL AAIFPDPYLHIGGDEVDDSQWKANAAIQRFMRDNKLADSHALQAYFNRKLETILEKHHRQ MVGWDEIYHPDLPKSILIQSWQGQDALGQVAQNGYKGILSTGFYLDQPQSTAYHYRNEIV PQGLNGVDVIADTDSAQSWAFSMPRLKGKPVEGSFTLVKGDAGWRGFIDFAGKSRRAVDN IQWRDDNQVTFTVDTWMGETRPVVNVDNDTLTGYFLVGNTRYPISGTRLDEVPKGMAPVV PDPANEANLLGGEAALWAENVVAPVLDIRLWPRAFAVAERLWSAKDVNDIDNMYTRLQAM DSWSTVSVGLQQHTQQQVQFTRLANTADTLPLQILAQALEPAQYYTRQHLKFQAGNYHQF EPLNRLADALNAESTTVRQMNKWADRLVSDAEDTESAEALRHIFTRWQSNTSDALALSEN SYQLKAIKPVIQEVDKLASTGLRLTDLVARQGTLDDNEIASIQSELDNAAKVQDEVVIAA VYPLETLLRATRNQ >gi|333596726|gb|GL892086.1| GENE 1916 2040221 - 2042929 3627 902 aa, chain - ## HITS:1 COG:STM4456 KEGG:ns NR:ns ## COG: STM4456 COG0474 # Protein_GI_number: 16767701 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 902 1 902 902 1613 87.0 0 MLKNITRQLFTQLSRHLPRRLIARDPLPNAKTMAGAAIPASLTERCLNVAAMDENEVWRA FGGHPEGLNAQEVSKSRAKYGDNQIPAQKPSPWWVHLWLCYRNPFNLLLTMLGIISYATE DLFAAGVIALMVGISTLLNFIQEARSTKAADALKAMVSNTATVSRVINDLGENAWIELPI DQLVPGDLVKLAAGDMIPADLRIIQARDLFVAQASLTGESLPVEKVARTRDLQQMNPLEC DTLCFMGTTVVSGTAQAIVTATGGNTWFGQLAGRVSEQESEPNAFQKGIGRVSMLLIRFM MVMTPIVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK HLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIAGKTSERVLHSAWLNSHYQTGLKKL LDVAVLEGVDEEAARTLSGRWQKVDEIPFDFERRRMSVVVSEQPDVHQLICKGALQEILN VSTQVRHNGEIVPLDETMLRRIKRVTDNLNRQGLRVVAVASKFLPAREGDYQRIDESDLI LEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGDVVVGSDI EHLSDDELAQLARRTTLFARLTPMHKERIVTLLRREGHVVGFMGDGINDAPALRAADIGI SVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVA SAFLPFLPMLPLHLLIQNLMYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMLFFGPIS SIFDILTFCLMWFVFNANTPEHQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWP LIVMTGIVMALGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMVLTQMVKGFYARRYG WQ >gi|333596726|gb|GL892086.1| GENE 1917 2043316 - 2044263 1008 315 aa, chain + ## HITS:1 COG:STM4455 KEGG:ns NR:ns ## COG: STM4455 COG1609 # Protein_GI_number: 16767700 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 315 1 315 315 540 85.0 1e-153 MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMHQHGFSPSRSARAMRGQ SDKVVAIIVSRLDSLSENLAVQTMLPAFYEQGYDPIMMESKFSAQMVEEHLGMLQRRNID GVVLFGFTGLKEDVLKPWQPSLVLLARDASGFASVCYDDEGAIVILMQRLYEQGHRHISY LGVPHADITTGKRRHEAYLAFCKQHNLPAVASLPGLGMKQGYEQVASVLTPQTTALVCAT DTLALGASKYLQEQRIGELQLASVGSTPLMKFLHPEIISVDPGYAESGRQAAAQLIEQIN GRTEPRQIVIPAHLS >gi|333596726|gb|GL892086.1| GENE 1918 2044344 - 2044823 333 159 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 159 1 163 163 164 49.0 9e-41 MSTPAHLWLEDENGSPVVGSCMIPLRLGSIELKSFSHCVTIPVDPHWGKLTGTRVHRPIT IIKEFDQTTPLLYRAVCEGRTMKKATIKMYRILDSGIEAEYFNIILENVKFTTVAPYLSP NGTSSTHLETLELRYEAITWKYTEGNILYRDSWNDRCCA >gi|333596726|gb|GL892086.1| GENE 1919 2045052 - 2045744 292 230 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_3419 NR:ns ## KEGG: NT01EI_3419 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 230 1 229 229 294 65.0 2e-78 MYGNNEIISYLQANKILALKLDHAITGVSEQVKNQVDTISKGATRLLYYTSCFTDEYNDV CQRQKTEDIRFRDAVYKVLSGVDVACNMLQIYFEEIFKNKTSDQLEYIKQRLMAVNVHVA AVTLTGAGFTLAVASYVRLGLNLSLELSAIAGTWASRGIALIGFYGVVQKAADSAYRLHI QFPAYYSALYAQGLEMLYFLIEPIFHRAGAMKAQWASNDQIADIISRMIQ >gi|333596726|gb|GL892086.1| GENE 1920 2046128 - 2047546 1940 472 aa, chain + ## HITS:1 COG:ECs5217_2 KEGG:ns NR:ns ## COG: ECs5217_2 COG1263 # Protein_GI_number: 15834471 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 93 472 2 381 381 649 91.0 0 MSKVKQADIDQLIVLVGGRDNIATVSHCITRLRFVLNDPAKANPKAIEELKMVKGCFTNA GQFQVVIGTEVGDYYQALLATTGHSSADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPA LISGGLILGFRNVIGDVPMSDGKTLAQMYPALQSIYDFLWLIGEAIFFYLPVGICWSAVR KMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPEVWNFGLFTIAKVGYQAQVIPALLAGLA LGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHAFIGPFGRMIGDGVAFAVRHLMTGSF APVGAALFGFLYAPLVITGVHQTTLAIDMQMIQSLGGTPVWPIIALSNIAQASAVTGIII VSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNSVMAN GIGVGGLPGILSIQPAFWQVFALAMAVAIIIPMALTTVVYQRKFRQGTLQIV >gi|333596726|gb|GL892086.1| GENE 1921 2047598 - 2049253 2193 551 aa, chain + ## HITS:1 COG:STM4453 KEGG:ns NR:ns ## COG: STM4453 COG0366 # Protein_GI_number: 16767699 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Salmonella typhimurium LT2 # 3 550 2 549 550 945 81.0 0 MNTLPHWWQNGVIYQIYPKSFQDTTGSGTGDVRGVTQRLDYLKTLGIDAIWLTPFYISPQ VDNGYDVANYTAIDPSFGTLDDFDELVTEAHARGIRIVLDMVFNHTSTQHAWFRESLDKA SPYRQFYIWRDGTPDALPNNWRSKFGGNAWRWHAESEQYYLHLFAPEQADLNWENPAVRA ELKKVCEFWADRGVDGLRLDVINLISKDQHFPDDTIGDGRRFYTDGPRIHEYLQEMSRDV FTPRNLMTVGEMSSTSLENCQQYAALDGRELSMTFNFHHLKVDYPGGEKWTKAKPDFVAL KTLFSYWQQGMHNKAWNALFWCNHDQPRIVSRFGDEGEYRVAAAKMLGMVLHGMQGTPYI YQGEELGMTNPHFSRITDYRDVESLNMFAELRANGRDTDELLAILASKSRDNGRTPMQWD ASHNAGFTEGEPWIGVCDNYETVNARAALDDPDSVFYTYQSLIRLRKTLSVLTWGDYEDL LPEHPSLWCYRRQWQGQTLMVAANLSRERQQWQPDPVEGAWRVALSNYEDVPSRPDTLLL HPFEAIWWVQE >gi|333596726|gb|GL892086.1| GENE 1922 2049527 - 2050135 651 202 aa, chain + ## HITS:1 COG:no KEGG:CKO_03573 NR:ns ## KEGG: CKO_03573 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 202 1 202 202 355 92.0 7e-97 MHQANNGFYFSVEAAQNHNDTFFGDTDRYNPDDKGLTEAAQEIETRWRFDLGNGFAVAPG MVTVFTTSNTHYRPFIQGWKAFDNGLNLSARYRYNTVNDAHSDKELDGSGYTRRQSHQFD IWFAYNIGKFGMSYNPRFRWQDNVDQGTGDDTYWEHTVAFNYKLDDGWTPYVELVSLDKT YINDDGNHENDYAVRLGIVKQL >gi|333596726|gb|GL892086.1| GENE 1923 2050144 - 2050803 393 219 aa, chain - ## HITS:1 COG:PA3184 KEGG:ns NR:ns ## COG: PA3184 COG1737 # Protein_GI_number: 15598380 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 189 12 233 285 60 26.0 3e-09 MNSFQGSERLIFEYIQHHARNISNISAKEIARDTFTTTTSVNRVCKKMGYKSYTELRYRF LRDHFTPAPAAPDAGPQADDIVTDVARLLTHSSHIYLYARGASLTSLNYLSRFLSLASLP HLILNDMHQLTRVSKGTLVLISKSGETQSLIEMARNALRKGLKIIAITRQGSTLASISTL CWPLPIDMNAVSLYQREGQLELLSAVDRIGCRLLQHDTV >gi|333596726|gb|GL892086.1| GENE 1924 2050983 - 2052380 1678 465 aa, chain + ## HITS:1 COG:ECs3266 KEGG:ns NR:ns ## COG: ECs3266 COG1299 # Protein_GI_number: 15832520 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli O157:H7 # 127 459 38 400 415 202 36.0 8e-52 MTRQKVVAVTACPTGIAHTFMAANKIIAWAKAHNIEVKVETQGSDGVKNRLTKQDIASAT AIILATDVPIQDAERFENIPHLQTRTQELIKHTDRYLRQALAMEKNVTSVAHEDDLPRSA YQIFIGHIMAAISYMLPVVVMGGLMMATAKITGQFINIEHSPFSVLDKVGFMTIKFMYPV FAMYLAFSIAGKPALIPGLIGGMMSDEVYKRFFDIEGFMPSGFFGAIGIGFFVGYLVRWL NDSIHVRQQLTTIKTMLIVPLITGITLVMVMEYLINPIFGSLNQLMVVFFTSAGDTGRGF YSAMIAAGTAFDLGGPVNKAAGSVALGLNGISETFDLTARELSIVIPSIGVGFAAFLNGR FGLPDVFSQEERTVGSTSLLLGVIGISEGAIPFILKNPRLIPVFMTGAVAGALVAIALGV KQTLPLPAIWGWPLATNVAGYLASVFIGALICALGVLYVSPKNAR >gi|333596726|gb|GL892086.1| GENE 1925 2052391 - 2054988 1888 865 aa, chain + ## HITS:1 COG:lin0449 KEGG:ns NR:ns ## COG: lin0449 COG0383 # Protein_GI_number: 16799525 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Listeria innocua # 1 856 1 850 860 476 33.0 1e-134 MNQIHVIAHTHWDQEWYFTRQDSMVLASYNFADVINTLEQDPAYTCYHLDGQMAVVEDFL AINPDYRARLETLVKEKRIFVGPWYTQTDTYNVHGESIIRNLKYGIFAARKLGHAMQVGY LPDTFGHNAQMPTILQGCNIDNIVFWRGIDHDRHAKSSQFLWRAPSGATVIACAMALGYG AAKNMRSEACHLQGKIYPMVTLLRSRAGINDLLLPCGGDQVSIDPALPKILEIASAHSPD EDRYVISSLERYVDILRAQREQFEHWEGELKSPRYTRIHKTIGSVRYDIKQKNDEVERFI LRQLEPTIAMARHQGIPVNLSVVDTLWKKLLRSHAHDSIGGCNSDATNRDILHRLEQTEQ LCHSLWNLVVKTLAAACAQEGDLLIFNPLATPTQRVVKTTLYSRAENIALTYQGQPIPFD VLKRDVLPGGTAISLTAEGECETPLPPYFRWQVALQTPILPSVGYLTVNVEDSPAPFRQP EQIKGEGIENTYYQLTLDTGTLTLHDKRSGRRIPSFFTLEDCADAGDSYDFSPLAGDTPT RCSHFTLVDCLKTPLVEKLIVEATMLLPRDLTDRQEDTRTPFSLRLVCELRHGDPNLYVE ASLENSHCDHRLRLLIGSDIHTRHALASQPFAIIQRETGYDDENWQERYREMPVDIETSE GIIAVTEPGKALVVTSRGMKEFQIIGSEPAAIALTMFKSTGVLGRNDLDWRPGRASGINN TVVETPDAQLLKPLRFSFTVALADNADHLTLRQLENQAAGQPFTYQRQTLHTLDHRLERF ALRLPECRIPAEFSLLTLPEPLILSALPHAQQLHGTVVRLFNAGTEPVPVPESLALLRQI NYLEEPMPPVTAILPSATCDFLIEA >gi|333596726|gb|GL892086.1| GENE 1926 2054990 - 2055571 419 193 aa, chain + ## HITS:1 COG:hrsA_1 KEGG:ns NR:ns ## COG: hrsA_1 COG1762 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 151 21 171 183 134 49.0 1e-31 MNLLALTHPDLVFINPPQRTPDALIRWLAGPLARRNVINDREAFIDSVLQRESEGPTALG EALAVPHGKSEAVQQAAFCLALFDEPICWPGLEGDEEVRMVFLLAIPPAEAGSTHMQLLT TLTSKLTEDRVREQLLAARTREEAMSALGEEECQKQDDAPERSLLIPLLLGSIAAAAFFA GRIELALRGELIE >gi|333596726|gb|GL892086.1| GENE 1927 2055932 - 2058070 2813 712 aa, chain + ## HITS:1 COG:STM4452 KEGG:ns NR:ns ## COG: STM4452 COG1328 # Protein_GI_number: 16767698 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Salmonella typhimurium LT2 # 1 712 1 712 712 1450 95.0 0 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSSQMHERSQVDINE IQTAVENQLMSGPYKQLARAYIEYRHDRDVQREKRGRLNQEIRGLVEQTNSSLLNENANK DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVSAHERGEIHYHDLDYSPFFPMFNCMLIDL KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTESF NKHRKTAEEWQIPDADGYARSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQQSILRNRISGLGKNRKTAVFPKLVFAIRDGLNHKFGDPNYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEDENGEQIHDGRNNLGVISLNLPRIALEA KGDEAAFWTLLDERLQLARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIF KNGRASISLGYIGIHETINALFSNKHIYDNDALREKGIAIVQRLRDAVDQWKDETGYGFS LYSTPSENLCDRFCRLDTAEFGIVEGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAAYPPV ASGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG >gi|333596726|gb|GL892086.1| GENE 1928 2058176 - 2058640 496 154 aa, chain + ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 302 91.0 1e-82 MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRLNSGMPFTAEMEDRIINDLN DTRIKRQGISLSGGDPLHPQNVPAILKLVKRIRRECAGKDIWVWTGYKLDELNAQQREVV DLINVLVDGKFVQDLKDPMLIWRGSSNQVVHHLR >gi|333596726|gb|GL892086.1| GENE 1929 2058673 - 2060583 2247 636 aa, chain - ## HITS:1 COG:STM4448_1 KEGG:ns NR:ns ## COG: STM4448_1 COG3711 # Protein_GI_number: 16767694 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 1 512 1 513 513 801 78.0 0 MRFPNQRLAQLFDLLQNETLPQDELAQRLSVSTRTVRADITALNALLASHGAQFILSRGN GYQLKINDVARYQQLQASHPRALRIPQTGPERVHYLVVRFLTSAFSLKLEDLADEWFVSR ATLQSDMVEVREWFHRYNLTLETRPRHGMKLFGSEMAIRACLTDLLWELAQQDSLNPLVT DVALNAGVAEKMVPVLHDALTRHHIRLTDEGELFLRLYCAVSVRRISEGYPLPEFHAEDV EENVREAAKDIAVAIQELAGKALSPSEESWLCVHIAARQIQEIAPSAINADDDEALVNYI LRYINTHYNYNLLSDEQLHADLLTHIKTMITRVRYQIMIPNPLLDNIKQHYPMAWDMTLA AVSSWGKYTPYVISENEIGFLVLHIGVGLERHYNIGYQRQPRVLLVCDAGNAMVRMIEAV LQRKYPQIEVTRTLTLREYELADAIGEDFVISTARVSEKSKPVVMIAPFPTDYQLEQIGK LVLVDRTRPWMLEKYFDAAHFRILDKPVDQQTLFRELCGQLEGEGFVGAEFLDSVIEREA IVSTMLGDGIALPHSLGLLAQKTVVYTVLAPQGIPWGDETAHVIFLLAISKSEYEEAMAI YDIFVTFLRERAMARLCQCEDFAAFKAVAMESLSRF >gi|333596726|gb|GL892086.1| GENE 1930 2060603 - 2061739 1339 378 aa, chain - ## HITS:1 COG:RSp0183 KEGG:ns NR:ns ## COG: RSp0183 COG2706 # Protein_GI_number: 17548404 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Ralstonia solanacearum # 24 377 59 406 410 177 35.0 3e-44 MHTRNLLVASLSLLATSAIAQTQYAWIGTYNPNGEGLYRFTVDPQTGALSNKTLVSKLPN AAQLTVSHDGKTLYLASEVEQGVVQALRVEDNGDLSELNQVASGGAGPVYLSLTPNGKHL LVANYVSGTVAVLPVNADGSLGEATDTHQDRGEPGAAKPEAAVEGSFAISDHNGPHAHMI AADPSGKYVFSTDLGLDRIYQYRFDDQTGKLTPNDPPFISASSKGAGPRHFVFTPKGDAL WLINEEASTLTHYALDSNGRLKEGKTVSALPDGYKGTSFAAGLALSADGKQLYVANRLHN SIGHFTVTAEGTLTHQDDVWTRGDYPRTLTLDKQGRWLYVMNQRSDNITRFRVAPDGKLS AGPDYTPVGSPSQMVISP >gi|333596726|gb|GL892086.1| GENE 1931 2061834 - 2062574 1073 246 aa, chain - ## HITS:1 COG:no KEGG:ECL_00649 NR:ns ## KEGG: ECL_00649 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 246 1 246 246 466 97.0 1e-130 MKLTPNFYRDRVCLNVLAGSKANASAIYEAAEGHVLVGVLSKNYPDVASAVADMREYAAL IDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNESVVNGLVSPT GTVGMVKISTGPLSSTAPDGIVPVETAIALLKDFGGSSIKYFPMGGLKCRDEYQAVAEAC ARHDFWLEPTGGIDLENYEEILQIALDAGVSKIIPHIYSSIIDKASGDTRPEDVRTLLEM TKKLVK >gi|333596726|gb|GL892086.1| GENE 1932 2062571 - 2063689 1437 372 aa, chain - ## HITS:1 COG:STM4446 KEGG:ns NR:ns ## COG: STM4446 COG1921 # Protein_GI_number: 16767692 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 372 1 372 372 636 89.0 0 MPSIYEKYNLKQVINTSGRMTALGVSTPRPDVVQAAMDGMNHYFEMKDLVNKTGEYIAKL LEVEGATVVSCASAGIAQSVAAVLVKDSDWLLENLHVTPIENNEIVLPKGHNVNFGAPVG TMVALGGGKLVEAGYANECSADQLAAAITPRTAAILYIKSHHCVQKSMLSVEQAAVVARK HDLPLIVDAAAEEDLHTYYRSGADLVIYSGAKAIEGPTSGLVIGKTRYVEWVKRQTAGIG RAMKVGKEGILGLTCAIEHYLTATKESGAEMVAKMTPFIDALNTLNGVTARVVWDSAGRD IARTEIKFDEATTGVGTGELVNALKQGEYAIYFRGYKANEGIIEADVRSVNADQLNIVYR RISEVLGQEKNA >gi|333596726|gb|GL892086.1| GENE 1933 2063673 - 2064806 1292 377 aa, chain - ## HITS:1 COG:STM4445 KEGG:ns NR:ns ## COG: STM4445 COG3964 # Protein_GI_number: 16767691 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 1 377 1 377 377 639 85.0 0 MFDLLLRRARLADDTLTDIAIQDGKIAATGDIDAPARKTVELNGDVFVSAGWIDSHVHCY PNSPIYHDEPDSVGIATGVTTVVDAGSTGADDVDDFYAITRKASTEVFALLNISRVGLIA QNELANMANIDAEAVKQAVTRHPDFIVGLKARMSSSVVGENGITPLERAKAIQKENGDLP LMVHIGNNPPNLDEIAELLSSGDIITHCYNGKPNRILTPSGELRASITSALKRGVRLDVG HGTASFSFEVAKRAIAMGILPHTISSDIYCRNRINGPVGSLASVMSKFLAIGMSLPQVID CVTANAADGLRLTHKGRIQPGLDADLTLFTLKRQPTVLTDAENDSLQTEHLLVPLAAIRA GKGYMTEQGSTEHAFDL >gi|333596726|gb|GL892086.1| GENE 1934 2064849 - 2065490 1175 213 aa, chain - ## HITS:1 COG:no KEGG:ECL_00646 NR:ns ## KEGG: ECL_00646 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 213 1 213 213 320 99.0 2e-86 MEQNKGFWYADWSFPIFVGLLSSGVFAGTHMYYLYGIGAFNEVAFVAMLKAGIDTGVYGA VAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLGAGIMFPVTNFIASLITGL VIGLAIGYVIILARKFTINQSNSTYGADVMMGAGNASGRFLGPLIILSAMTASIPIGVGS LVGALLFYIWQKPITGGAILGAMILGWLFPVAL >gi|333596726|gb|GL892086.1| GENE 1935 2065504 - 2066280 941 258 aa, chain - ## HITS:1 COG:no KEGG:ECL_00645 NR:ns ## KEGG: ECL_00645 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 26 258 26 258 258 434 100.0 1e-120 MFLIILIKSLIIGGLVGVGVGAGAARMFHAPTTQGMGAFRTLGELNSCEGDPASHFSFGL GFFFNAWASSVAAGAFTQDVDHRIIPNWGAAALMIKNRNVGETLHDPRKMAIACGIIGMI VVTFLNLTASSVPAALQVTAVKVLVPAANLLVNTVMPVIFWLAAIDAGKKSGFWATIFGG AAQLIMGNAVPGLVLGILIGKGVEESGWNHVTKVMMAAIVLLFVLSGFFRGFDMKMIESF HLTVPNWLDMIHNSLSGK >gi|333596726|gb|GL892086.1| GENE 1936 2066303 - 2066602 314 99 aa, chain - ## HITS:1 COG:no KEGG:ECL_00644 NR:ns ## KEGG: ECL_00644 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 99 1 99 99 161 100.0 7e-39 MKEQFTTTVRVKGKGDAKARAFADALNHVQAAVMKASPHILLRIEPQDVQVVQAQEAVRK EAFLFFFLRRERRTYSVELDVTVNVTAINLDQVDFVTQR >gi|333596726|gb|GL892086.1| GENE 1937 2066605 - 2066967 553 120 aa, chain - ## HITS:1 COG:no KEGG:ECL_00643 NR:ns ## KEGG: ECL_00643 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 120 1 120 120 193 99.0 2e-48 MEQITVVIGDRLGKGQKVAAGVEKAGGRAVVVPGMAADMKLGDVMKAENATFGISFCGSG GAGAITAQTKYGYKAKYGMRSVDEGVTAINEGCNVLGFGFMDKEELGERLVQAWQKKYGA >gi|333596726|gb|GL892086.1| GENE 1938 2066978 - 2067298 350 106 aa, chain - ## HITS:1 COG:no KEGG:ECL_00642 NR:ns ## KEGG: ECL_00642 # Name: not_defined # Def: PRD domain-containing protein # Organism: E.cloacae # Pathway: not_defined # 1 106 1 106 106 177 94.0 2e-43 MNDVGEQAVQTEQLANTMLQQVYALLARHNIIPNAVQEQMLTSHVRAMAHRSVTGEPLPE VEAELFDEISPDSMQLAREVVAQFGNLPDEEAWLLSVHFEVAKDNL >gi|333596726|gb|GL892086.1| GENE 1939 2067634 - 2068020 538 128 aa, chain - ## HITS:1 COG:STM4439 KEGG:ns NR:ns ## COG: STM4439 COG3783 # Protein_GI_number: 16767685 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 166 79.0 9e-42 MRKHLLAIVAASTLVLGSSAFAADLEDNMDILSQNLKVVQKTDNAAEMKDALTKMREAAL DAQKATPPKLESKAADSAEMKDYRHGFDVLVGQIDGALKLANEGKVKEAQAAADQFVTTR NTYHKKYR >gi|333596726|gb|GL892086.1| GENE 1940 2068063 - 2069415 1779 450 aa, chain - ## HITS:1 COG:STM4438 KEGG:ns NR:ns ## COG: STM4438 COG0312 # Protein_GI_number: 16767684 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Salmonella typhimurium LT2 # 1 450 1 450 450 856 96.0 0 MAFAMKVTSQVEAQRKILEEAVSTALTLASGKSDGAEVAVSKTTGISVSTRYGEVENVEF NSDGALGITVYHQNRKGSASSTDLSPDAIARTVQAALDIARYTSPDPYAGVADKELLAFD APDLDLFHPAEVTPDEAIELAARAEQASLQADKRITNTEGGSFNSHYGIKVFGNSHGMLQ GYSSTRHSLSSCVIAEENGDMERDYAYTIGRALGDLQSPEWVGKECAERTLSRLSPRKLS TMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPEWLTIEEHPHLLKG LASTPFDSEGVRTERRDIVKDGVLTQWLLTNYSARKLGLKSTGHAGGIHNWRIAGQGLNF EQMLKEMGTGLVVTELMGQGVSGITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWR NIVTVGNDIETRSNIQCGSVLLPEMKIAGQ >gi|333596726|gb|GL892086.1| GENE 1941 2069511 - 2070062 787 183 aa, chain + ## HITS:1 COG:STM4437 KEGG:ns NR:ns ## COG: STM4437 COG3028 # Protein_GI_number: 16767683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 182 1 182 183 243 90.0 2e-64 MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKQLGAEMVELGKNALDKIPLD QDLRDAIELAQKIKKEGRRRQLQLIGKLLRQRDVEPIRQALDKLKNRHNQQVALFHKLEQ IRDRLIEQGDDAVPEVLNLWPNADRQQLRSLIRNAKKEKEGNKPPKSARLIFQYLRELSE NEE >gi|333596726|gb|GL892086.1| GENE 1942 2070151 - 2071524 1688 457 aa, chain - ## HITS:1 COG:ZyjfG KEGG:ns NR:ns ## COG: ZyjfG COG0773 # Protein_GI_number: 15804823 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 EDL933 # 1 457 1 457 457 906 94.0 0 MRIHILGICGTFMGGLAMLARSLGHEVTGSDANVYPPMSTLLEKQGISLIQGYDASQLEP QPDLVIIGNAMTRGNPCVEAVLERNIPYMSGPQWLHDFVLRDRWVVAVAGTHGKTTTAGM ATWILEACGYKPGFVIGGVPGNFDVSARLGDSPFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIILPENDINLKQTLAMGCWSEQEL VGEQGHWQAKKLNADASEWEVLLDGEKVGEVKWGLVGEHNMHNGLMAIAAARHVGVLPAD AANALGTFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARILAVLEP RSNTMKMGICKDDLAPSLGRADEVFLLQPQHIPWQVAEVADACIQPAHWSADVDVLADMV VKAAQPGDHILVMSNGGFGGIHQKLLDGLAKKAATAE >gi|333596726|gb|GL892086.1| GENE 1943 2071704 - 2072702 1237 332 aa, chain + ## HITS:1 COG:fbp KEGG:ns NR:ns ## COG: fbp COG0158 # Protein_GI_number: 16132054 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Escherichia coli K12 # 1 332 1 332 332 670 96.0 0 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQQKLDLFANEKLKAALRARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGSKQVAAGYVVYGSSTMLVYTTGCGVHAFTY DPSLGVFCLCQERMRFPEKGNTYSINEGNYIKFPNGVKKYIKFCQEEDKATQRPYTSRYI GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI VPESLHQRRSFFVGNRHMVDDVERMIREFPDA >gi|333596726|gb|GL892086.1| GENE 1944 2072742 - 2074310 1772 522 aa, chain - ## HITS:1 COG:tar KEGG:ns NR:ns ## COG: tar COG0840 # Protein_GI_number: 16129838 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 11 519 1 517 553 278 42.0 3e-74 MLKTLSIRTGLLSLLAVMTLLLLIVSGIGIYALTQSSASLQRINHLQGEQMVQLNSGYTL ILRARNEAGQAVRMMEVGLLDDAARAVKTINQEMALAQKTLKGVIGSGVADEQGQKLLDN VAASLAVYNQQGISPMLKALNEQSADSYYDLLENKLVPVAKQFDNAMQAFQAWSEARGKA EVSAVQASKIRVLILIIVAALLTAGIIVLAWLVLRHMLLKPLSASIAQLEHVAAGDLTHT LNAPASQEFNRLNAAIEGMRQALMDSVLRVRDASSQIDTGSRELTAGNMNLAQRTESTAT SLEQTAASMEEITATVKLNADNAEQAHQLAKSVSDTADHGSEMVCYVIEKMRDISGSSAR IADILSVIDGIAFQTNILALNASVEAARAGEQGRGFAVVAGEVRNLASRSADAAKEIRSL ISDSQTHVNEGSELAQQAGETMDEIATEVLRMTKLMREIATASQEQSRGIEQVNIAVNQM DETAQQNAALVQQSSAATRSLEEQSRELMEAMASFKLTAQTA >gi|333596726|gb|GL892086.1| GENE 1945 2074404 - 2075381 1400 325 aa, chain - ## HITS:1 COG:yjfF KEGG:ns NR:ns ## COG: yjfF COG1172 # Protein_GI_number: 16132053 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 321 1 321 323 500 96.0 1e-141 MITLGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSV IAFTGVFLAKAIGYWGISPLLAFPLVLIMGCAFGAFMGLLIDALKIPAFIITLAGMFFLR GVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLGVVVIGIFLAHRTRFGNQ VYAIGGSATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSVYTQAGYALAGVGVELDAI ASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQ RGLTVLWENRQSSPVTRVNTSVTER >gi|333596726|gb|GL892086.1| GENE 1946 2075392 - 2076414 1262 340 aa, chain - ## HITS:1 COG:ECs5207 KEGG:ns NR:ns ## COG: ECs5207 COG1172 # Protein_GI_number: 15834461 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 340 2 341 341 432 85.0 1e-121 MSRSLSQTGEAKRRFSWPTGTPQIVALLLVLLVDSLVAPHFFQIIVQDGRLFGSPIDILN RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATAASMTVAGHSLPVVLLAALGSGVLA GLWNGILVAVLKIQPFVATLILMVAGRGVAQLITSGQIVTFTSPSLAWIGSGNFLFFPTP VIVALVTLVVFWLFTRKTALGMFIEAVGINIRAAKNAGVNTRLMVMLTYVLSGVCAAIAG VIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL SGFQPELNQVVKAVVVLIVLIVQSPRFITLIKGFRGHDKT >gi|333596726|gb|GL892086.1| GENE 1947 2076428 - 2077930 1826 500 aa, chain - ## HITS:1 COG:ECs5206 KEGG:ns NR:ns ## COG: ECs5206 COG1129 # Protein_GI_number: 15834460 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 500 1 500 500 913 93.0 0 MTTEQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKTLTGVYH ADRGAIWLEGHAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPRRFGLLRRK EMEARATKLMESYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE VEMLFTLMRQLRNQGVSLIFVTHFLDQVYEVSDRITVLRNGSFVGCRETRELPQIELVKM MLGRELETNALQRAGRTLLSEKPIAAFHDYGKKGIIAPFNLEVRPGEIVGLAGLLGSGRT ETAEVIFGIKPADSGTALIKGKPQTLRSPHQASCLGVGFCPEDRKTDGIIAAASVRENII LALQAQRGWLRPIPRKEQNAIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVLLSRWLLTK PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ VAEIPLDKLSVPAIMNAIAA >gi|333596726|gb|GL892086.1| GENE 1948 2078015 - 2078968 1101 317 aa, chain - ## HITS:1 COG:ytfQ KEGG:ns NR:ns ## COG: ytfQ COG1879 # Protein_GI_number: 16132049 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 316 1 316 318 550 95.0 1e-156 MWKRLLLVTAVSAAMSSMAMAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD GQQKQENQIKAVRSFIAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS LYMTTVTADNVLEGKLIGDWLVKQVDGKPCNVVELQGTVGASVAIDRKKGFAEAIAKAPN IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKFKKDGTMPEKVTVTKSTL YLPDTAKEELEKKKNIS >gi|333596726|gb|GL892086.1| GENE 1949 2079278 - 2079808 799 176 aa, chain + ## HITS:1 COG:STM4414 KEGG:ns NR:ns ## COG: STM4414 COG0221 # Protein_GI_number: 16767660 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 339 95.0 2e-93 MSLLNVPAGKELPEDIYVVIEIPANADPIKYEIDKDTGALFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHTKLSKEYDH IKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWDNAEAAKAEIIASFERAAKK >gi|333596726|gb|GL892086.1| GENE 1950 2079950 - 2080294 219 114 aa, chain - ## HITS:1 COG:ECs5200 KEGG:ns NR:ns ## COG: ECs5200 COG2105 # Protein_GI_number: 15834454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 113 1 113 113 205 90.0 2e-53 MRIFVYGSLRTRQGNSHWMTNAQLLGNYTIENYQLYSLGHYPGAVPGNGTVQGEVYRIDN ATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRSVDGLTLIESGNWLDRDQF >gi|333596726|gb|GL892086.1| GENE 1951 2080297 - 2084073 4247 1258 aa, chain - ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 1258 1 1259 1259 2133 85.0 0 MSLWKKISLGVLIFIVLLLGTVAFLVGTTTGLHLLFNAANRWVPGLEIGQVTGGWRDLRL KNIRYEQPGVAVNAGEFHLAVKLGCLRDSQLCVNDLSLKDVNVAIDSKKMPKSEPVEEED SGPLNLSTPYPIALYRVALDNVNIKIDDTTVSVMDFTSGLRWQEKNLTLTPTSLQGLLIA LPKVADVAQEEIVEPKIQNPQPEEKPLGETLKDLFSKPVLPEMTDVHLPLNLNIEEFKGE QLRLTGDTDLTVFNMLLKVSSIDGNMKLDALDIDTNQGSVNASGNALLRDNWPVDITLNS ALNIDPLKGEKVKVKVGGALREKLEFGVNLSGPVDMVLRGQTQLAEAGLPLNLEVVSKQL YWPFTGEKQFQADDLKLKLSGKMTDYTLSFRTAVKGQDVPPADITLDAKGNELQVNLDKL TVAALEGKTELTALLDWQQAISWRGELKLTGINTAKEVPEWPSKLDGLIKTRGSLYGGTW QMDVPELKLTGNVKQNKVNVEGSLKGNSYLQWVIPGLHVALGRNTADIKGELGVKDLNLD ATIDAPNLDNALPGLGGTAKGLVKVRGTVEAPQLLADITANNLRWQELSIARVRVEGDVK STDQIGGNLDLRVERISQPDVNISLVTLAAKGNEKQHDLQLRVQGEPVSGQLHLTGSFDR QATRWKGVLDNTRFSTPVGPLVLSRSVALDYRNAEQKISIGPHCWTNPNAELCVPQTIDA GAEGRAQINLNRFDLAMLKPFMPETTQASGVFSGKADVAWDTTKEGLPQGSVTLSGRNVK VTQEVNDAPLPVAFDTLNLNADLRNNRAELGWLIRLTNNGQFDGQVQITDPQGRRNLGGN VNIRNFNLAMVNPIFSRGEKAAGMLSANLRLAGDAQSPQLFGQMRLNGVDIDGNFMPFDM QPSQLTMNFNGQSSTLSGSVLTQQGQINLSGDADWSQLDNWRARIAAKGSRVRITVPPMV RLDVSPDVVFEATPSLFTLDGRVDVPWARIVVHEVPESAVGVSSDEVMLNENLKPVEQKS AGIPINSNLIVHVGNNVRLDAFGLKARLTGDLKVAQDQQGLGLNGQINIPEGRFHAYGQD LIVRKGELLFSGPPDQPVLNIEAIRNPEATEDDVIAGVRVTGSADEPKAEIFSDPAMSQQ EALSYLLRGQGLDSQQGDGAAMTSMLVGLGVAQSGQVVGKIGETFGVSNLALDTQGVGDS SQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF >gi|333596726|gb|GL892086.1| GENE 1952 2084070 - 2085767 1969 565 aa, chain - ## HITS:1 COG:STM4409 KEGG:ns NR:ns ## COG: STM4409 COG0729 # Protein_GI_number: 16767655 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 4 565 16 577 577 1023 89.0 0 MLTSGIASAANVRLQVEGLSGALEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKAL GYYEPTIDFDLRPPPAKGRQVLIARVSPGEPVLIGGTNVVLRGGARTDRDYLDLLSTRPK VGTVLNHGDYDRFKKSLTSVSLRKGYFDSQFNKSQLGVALERRQAFWDIDYDSGERYRFG DVTFEGSQIRDEYLQNLVPFKKGDYYQSSDLGELNRRLSATGWFNSVIVAPEFEKSRKTK VLPLHGVVSPRTENTIETGVGYSTDVGPRVKASWKKPWMNSYGHSLTTSASISAPEQQLD FSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLAVSRYWDLSSGWQRAINLRWSLD HFTQANVTNTTMLLYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNSAWGSDVDFSVVQAQ NVWIRTLYDKHRFVVRGNLGWIETGDFERVPPDLRFFAGGDRSIRGYKYKSISPENDKGQ LTGASKLATGSLEYQYNVSGKWWGAMFVDGGEAVNDIRRSDFKTGAGVGVRWQSPVGPIK LDFAVPVGDKDEHGLQFYIGLGPEL >gi|333596726|gb|GL892086.1| GENE 1953 2086094 - 2086669 648 191 aa, chain + ## HITS:1 COG:msrA KEGG:ns NR:ns ## COG: msrA COG0225 # Protein_GI_number: 16132041 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Escherichia coli K12 # 1 189 23 211 212 332 91.0 4e-91 MPVATLHAVNNHSMTNVPDGMEIALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPT YREVCSGETGHAEAVRVVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPL TPEQEAAAHASLTRFQEAMQAAGDKRQVTTEIATAKPFYYAEDDHQQYLHKNPYGYCGIG GIGVCLPPQQA >gi|333596726|gb|GL892086.1| GENE 1954 2086670 - 2087728 784 352 aa, chain - ## HITS:1 COG:YPO0846 KEGG:ns NR:ns ## COG: YPO0846 COG1609 # Protein_GI_number: 16121154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 349 1 349 360 308 45.0 7e-84 MPGKLKMEEIASLTGYSVSTVSRVLSGKSYTSDKAREAIVRTARELGVLESMASGRLLIN GIAVFAPERTFQGRGDIFYLEVTKGIAEASARHNVWISYCGLEEQNADVKLFMEKASHKN INAIIIIGTDDSTIFKLASTLNKPCVLINSVDRDRVLDSVSPDHRAIGFTTMQYLFEQGH RRVLTITCLRRDTLYARLDGIKEAYRHFHVAFEPQRDLLVTEWFTAEEAERELDEWLLRH DRAQWPEVIFPNSTSMTEGVLKALQRHGLRVPEDISIITTDFAWNLANRLEKPITGITVP CRELGIEAVHLLQTRLNRPQAPVFNLLLQGKVIDYGSVSNATRHAARVALLE >gi|333596726|gb|GL892086.1| GENE 1955 2087921 - 2089072 1432 383 aa, chain + ## HITS:1 COG:SSO3049 KEGG:ns NR:ns ## COG: SSO3049 COG0673 # Protein_GI_number: 15899754 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sulfolobus solfataricus # 2 352 18 366 371 137 28.0 4e-32 MEKVRFGIIGIGNIGTVHARYLLAGTVSDACLAAVCDNATEKHPAIRQLVGGIPLFSDAQ EMLQSGLIDAVIVATPHYDHPRLSMLAMRNGIHTLCEKPAGVYTAQVQEMNACARECDVV FGIMYNQRPNPLYQKVKDLIDSGELGEIRRSSWIITNWYRSQSYYNSGGWRATWKGEGGG VLLNQDPHQLDLWQWLVGMPVRLRAFCQFGKHRDIEVEDEVTAYAEYANGATGVFITTVA ETPGTNRLEIVGDRGKVVVEEGKLRYWRLRESETEFNARWQNGFGEPECWEVSVPVAPEY SEHHVITANFCAAVLRGEPLIAPGLEGIRGLTLSNAMHLSTWTDDWVELPLNEKQYLRLL QQRISTSVDKGATSITLDAAGTW >gi|333596726|gb|GL892086.1| GENE 1956 2089088 - 2090266 1141 392 aa, chain + ## HITS:1 COG:AGl1778 KEGG:ns NR:ns ## COG: AGl1778 COG0673 # Protein_GI_number: 15891003 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 336 1 328 357 154 32.0 2e-37 MLNVAIVGTGNISHNHIQGYLQFGQRCRIVALVDIYPEKAEEKKARYGLTDARVYASHQQ MLADALSIDIVDVCTPPYVHAEISIDALHAGCHVLCEKPMAASLEECDAMIAAQQASGKT LSIIAQNRFTDAFWRLKAALDSGLAGKICHAQVDSFWWRGHCYYDLWWRGTWEKEGGGCT LNHAVHHIDAIQWMLGFPSEVVAMMTNVAHDNAEVEDLSAAIFKYPSGALTQLTASVVHH GEDQKIIIQGDKARISAPWQAYASVSADNGFPQETHDLERESQLNAVFQATPRLEWTLHT GQINDLLQSIERGTAPLVDGVQGKRSLELITAMYKSAITRSVVSLPIGRDDPFYRTGGTN ALAPRFYEKSASVANFSEVGAIPLGKDLDRGL >gi|333596726|gb|GL892086.1| GENE 1957 2090269 - 2091336 1251 355 aa, chain + ## HITS:1 COG:AGl1780 KEGG:ns NR:ns ## COG: AGl1780 COG0673 # Protein_GI_number: 15891004 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 354 7 336 338 305 47.0 1e-82 MNKNDGMNYAPVGKPQPVVQAGEFVFAAAALDHGHIYGMCNGLIEAGATLKWVYDPDPAK VETFVQLYPQVKVADSLDVILADDEVRLVAGAAIPSRRCALGLKAMAAGKDYFTDKAPLT TLEQLADAKAMVEKTGKKYAVYYSERLHVESAVFAGQLVQQGAIGRVVQTLGMGPHREGT GRPEWFYDRRDFGGILCDIGSHQIEQFLFYTGNRDATVVASQVRNVNHPQYPAFEDFGDA MLKGENGASGYFRCDWFTPDGLSTWGDGRLTLLGTDGYIEIRKYVDLTRGEQDVVYLVNN EGEFRYPVAGQVGFPYFGELILDCLHRTENAMTQAHAFKAAELCVKAQMLANAAD >gi|333596726|gb|GL892086.1| GENE 1958 2091346 - 2092368 805 340 aa, chain + ## HITS:1 COG:TM0585 KEGG:ns NR:ns ## COG: TM0585 COG0673 # Protein_GI_number: 15643351 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Thermotoga maritima # 4 329 3 336 360 145 28.0 9e-35 MNILNTAIIGAGAIHRCHVNALRQIPNVALRALVDIDSVNGLKLAMNYQCRFYQDYREML LDDSIDVVHICTPHFEHKNMILAALAAGKHVFCEKPVGMNSSELGDITTAAAQASGRLGV CYQNRYNPSSLRIHKELAQGSLGKMLSIKAVLTWSRAGAYYTESPWRGQLATEGGSLLIN QAIHTLDLMQWFAGGVTRLKGVVDSGELADVTEGEDSAMATLHFTNGARGLFYASNCNTM DSPLWLEIHCERGSLLLNDNTLWRITPGERFRLESDASPDGTAKSYWGLGHQQAIRRFYH AIHHPESTDFTDIRTAGKSIKLVEAFYRSSQLRQWIDINN >gi|333596726|gb|GL892086.1| GENE 1959 2092438 - 2093982 1546 514 aa, chain + ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 15 500 1 480 498 357 40.0 4e-98 MVKPTERRVGYGVALGYGITDLFGGGAFAIIGTWLLFFYTTYCGLSVVEAGSIFAIARVI DAVLSPIMGYVTDNFGDTWLGRKFGRRRFFLLLSSPLMFLYALLWVTDMGYWYYLGTYLS IELLSAMVLVPWETLAAEMTNRYEERSRLSGVRMICSQLGGFLAVSVPGVIMQFTGKDNS FTYTLTGLIFSCVFCIAVFITWYTTWEAKDVHQEYDFKVDNQRGSGLGNHLKYLVLDLFS SFRIRAFRLHIIIYIFSFTAMDVFGSVFTYYVVYCLSQDAAAVSGWLSIAAFASVPGTYG FMLLLNRLNMTPSAALRFSYSCIFLVLAFLFTVYLTKTEVPTLLFSAVFILLGAARSGLY YIPWNIYSFIPDIDEIVTQQRREGIFAGVMVLTRKSTVAIAIMIIGLVLQESGFVKGSGA QPESALGAIIGLMIFATAALLAVSFFATYRFKLTRETHKVLLKEIARRKLGGDYRDCDAD TRVVIKQLTGYEYDQVWGGDATRLAVGANLSTVK >gi|333596726|gb|GL892086.1| GENE 1960 2094177 - 2095514 1767 445 aa, chain + ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 1 442 1 442 447 818 94.0 0 MLNSILVILCLIAVSAFFSISEISLAASRKIKLKLLADEGNINASRILKMQENPGMFFTV VQIGLNAVAILGGIVGDAAFSPAFYSLFVKYMSVELAEQLSFILSFSLVTGLFILFADLT PKRIGMIAPEAVALRIINPMRFCLYVFRPLVWFFNGLANVIFRIFKLPMVRKDDITSDDI YAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTGRENIIWFDLHEDEQSLKTKVAQ HPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALE SFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVQRDENSWLIDGGTP IEDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFSGFKFEVVDIDNYRIDQL LVTRIDSKPTVLVPKLPDAEEKVSA >gi|333596726|gb|GL892086.1| GENE 1961 2095591 - 2095797 237 68 aa, chain - ## HITS:1 COG:no KEGG:SG4251 NR:ns ## KEGG: SG4251 # Name: ytfK # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 68 23 90 90 120 98.0 2e-26 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKQHLSVMSEVNRQV MRLQTEMA >gi|333596726|gb|GL892086.1| GENE 1962 2096122 - 2096679 674 185 aa, chain + ## HITS:1 COG:ECs5194 KEGG:ns NR:ns ## COG: ECs5194 COG3054 # Protein_GI_number: 15834448 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 183 1 183 184 310 83.0 8e-85 MTLRNLLAAACLLLPLMASAHNIEKGQRVPPVGIADRGELILDNDKFSYKAWNSAQLAGK VRVVQHIAGRTSAKEKNATLVEAIKAAKFPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN KKLYPWSQFIVDSDGVTRKAWQLEEESSAIVVLDKNGRVQWVKDGALTQDEVQQVVALLH KLLNQ >gi|333596726|gb|GL892086.1| GENE 1963 2096673 - 2097413 987 246 aa, chain - ## HITS:1 COG:ECs5192 KEGG:ns NR:ns ## COG: ECs5192 COG1218 # Protein_GI_number: 15834446 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 432 90.0 1e-121 MLDKICQLARDAGDAIMQVYDGATPMDVVSKADDSPVTAADIAAHTVILKGLQALTPDIP VLSEEAPQSWDERQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIEKGKAVLGVVYAPVM KVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHSDSELEEYLQQLGEHQTTSIGS SLKFCLVAEGQAQLYPRFGPTNVWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSLY >gi|333596726|gb|GL892086.1| GENE 1964 2097604 - 2099547 2580 647 aa, chain + ## HITS:1 COG:STM4403 KEGG:ns NR:ns ## COG: STM4403 COG0737 # Protein_GI_number: 16767649 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 1 647 1 647 647 1180 90.0 0 MIKFSATLLATLIAASVQAATVDLRILETTDLHSNIMDFDYYKDTPTEKFGLVRTASLIN AARGEVKNSVLVDNGDLIQGSPLGDYMAAKGLKKGEIHPVYKAMNTLDYAVGNLGNHEFN YGLKYLHDALAGAKFPYVNANIIDVKTQKPLFTPYLIKETEVVDQDGKKQTLKIGYIGFV PPQIMTWDKANLDGKVTVNDITETARKYVPEMRAKGADVVVVVAHSGLSADPYQVMAENS VYYLSQVPGVDAILFGHAHAVFPGKDFADIKGADIEKGTLNGVPSVMPGMWGDHLGVVDL VLNNDSGSWKVTQSKAEARPIYDAAAKKSLAAEDKKLVDVLKHDHDATREFVSKPIGKSA DNMYSFLALVQDDPTVQVVNMAQKAYAEHFVQGDPDLAKLPVLSAAAPFKVGGRKNDPAS YVEVEKGQLTFRNAADLYLYPNTLVVVKATGKEVKEWLECSAGQFNQIDPHSSKPQSLIN WDGFRTYNFDVIDGVEYQIDVTQPAKYNGECQAINPQAERIKNLTFNGKAIDPNATFLVV TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWISAESKKAGEIHPAVDNNWRLAPIHS DTTLDIRFETSPSDKAAAFIRDKAQYPMKKVATDDIGFAIYQVDLSK >gi|333596726|gb|GL892086.1| GENE 1965 2099629 - 2100015 485 128 aa, chain - ## HITS:1 COG:ECs5189 KEGG:ns NR:ns ## COG: ECs5189 COG1733 # Protein_GI_number: 15834444 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 7 128 35 156 156 212 82.0 1e-55 MKTTIPTLSEQMRDGNLFAEQCPSREVLKHVTSRWGVLILLALREGTHRFSALRHKMGGV SEKMLSQSLQALEQDGFVNRVSYPVVPPHVEYSLTPMGLEVSEKVAALADWIEVNTPKVM AIRDERAA >gi|333596726|gb|GL892086.1| GENE 1966 2100100 - 2100948 1150 282 aa, chain + ## HITS:1 COG:ECs5190 KEGG:ns NR:ns ## COG: ECs5190 COG0702 # Protein_GI_number: 15834443 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 282 1 282 286 389 82.0 1e-108 MIAITGATGQLGQHVIEELLKTVPASQIVAIVRNPAKAEALRQQGVVVRQADYTDEAAFT TALNGVDKLLLISSSEVGQRAAQHQNVINAAKAAGVKFIAYTSLLHADRSPLGLHVEHVE TENALAESGLPYALLRNGWYTENYLASAPPALEHGVFMGAAGEGKIASATRADYAAAAAK VISEEGHAGKVYELAGDNAWTLSELAAELSKQSGKPVTYQNLSEADFAAALKGAGLPAGL AEMLADSDTGASRGGLFDDSRTLSKLIGRPTTPLAESVKAIL >gi|333596726|gb|GL892086.1| GENE 1967 2101030 - 2101854 848 274 aa, chain + ## HITS:1 COG:mll5158 KEGG:ns NR:ns ## COG: mll5158 COG2207 # Protein_GI_number: 13474301 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 25 271 33 282 290 147 35.0 2e-35 MQGVPEQFTDERDSARFRHLAQLPGLELYHAHISDYAFEPHTHEAFGIGTIETGAERFRY RGSQHLAAEKSVVTMNPDEIHTGESATEGGWRYRMVYIEPDLLEEVTGLRHWWFNDVTRH DPLRSQQIGQLIYGLWHTNDPLAQKGLLLDLIQTFQPLAHHAPVMQEAAHRFDRVRDYLH DNYMRALTLDELANVVSLSPYHFQRQFKAHFHVTPHQMLMAIRLWRAKAFLTHGMPAAEV AAATGLTDQSHLTRAFTRRYGITPVRYQKQVMPR >gi|333596726|gb|GL892086.1| GENE 1968 2101918 - 2102895 1069 325 aa, chain + ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 5 324 4 323 324 482 83.0 1e-136 MDGKMISGVLYALLAGLMWGLIFVGPLIVPEYPAILQSTGRYQALGLIAVPLAWLGRARL RQLGRQDWLTALALTMMGNLIYYVCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQR DGKLAWSKMVPALACIAVGLVCVNIAELRHGLEDFSLWRYGSGIVLAFISVVCWAWYALR NARWLRENPDKHPMMWATAQALVTLPVSLLGYVGACVWLGSQQPDFALPFGPRPWLFVGL MVAIAVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFLMRQSMPPLLTACGIA LLVVGVVIAVRGKPEKPRVIPASEM >gi|333596726|gb|GL892086.1| GENE 1969 2102975 - 2104624 1965 549 aa, chain - ## HITS:1 COG:tsr KEGG:ns NR:ns ## COG: tsr COG0840 # Protein_GI_number: 16132176 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 549 1 551 551 483 58.0 1e-136 MFKRIKVITLLISVLLVLGIMQLISAGIFINALNNDKENFTVSQLSSQNVAEFTDAWISL NQARVTLNRGMLRLQSSMASQINGGQLNELVNTAKNLLADAQTHYDKYYALPETPGMDEH LADRLEEQYRIYSATLTQMNVLLGQGNLEEMFKQNAEQKQTAMQKVYREWREAQAALTAK GIQDNESDYKRILWILSTVMLLVIAVIISSWIAMRRVLLLPLEEVINHIRAIAAGDLTQP IQAEGKNEMAILARNVHEMQTALANTVGVVREGADTIYTGAGEISAGSNDLSSRTEQQAA SLEETAASMEQLTATVKQNADNARQASRLALDASSTAKKGGNVVEGVVRTMDEIATSSSK IAQITNVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAQAAKEIKAL IDDSGERVNAGSQLVNEAGATMAEIVNAVTRVTDIMGEIASASDEQSRGIDQVGQAVAEM DRVTQQNASLVEESAAAAAALEDQAARLNEAVAVFKITRNQAVKAAPVKTHVPKAQPVAA ASEANWETF >gi|333596726|gb|GL892086.1| GENE 1970 2104870 - 2105532 717 220 aa, chain + ## HITS:1 COG:ytfE KEGG:ns NR:ns ## COG: ytfE COG2846 # Protein_GI_number: 16132031 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Escherichia coli K12 # 1 218 1 218 220 407 94.0 1e-113 MAFRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAASRKELNVEVIEAELAQLAE QPVDKDWRTAPLTEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPRGLAKYLT MLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDDAGELLEVIKHTTNNVTPP PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALADK >gi|333596726|gb|GL892086.1| GENE 1971 2105619 - 2107028 1907 469 aa, chain - ## HITS:1 COG:STM4398 KEGG:ns NR:ns ## COG: STM4398 COG1113 # Protein_GI_number: 16767644 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 469 1 469 469 809 95.0 0 MVDQVKVAAAEEATSEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVV AITAYAQFWFPGLSDWVASLAVIVLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGL VMVLTHFQSPTGVQASFAHLWNDGGWFPKGISGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPLRIIMFYVFALIIIMSVTPWSSVVPTKSPFVELFVLVGLPAAASLIN FVVLTSAASSANSGVFSTSRMLFGLAQEGVAPSAFAKLSKRAVPAKGLTFSCICLLGGVV MLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCW VCMAFFVFVLVLLTLEDDTRQALIVTPLWFIALGLGWMFIGKKRMAGMR >gi|333596726|gb|GL892086.1| GENE 1972 2107344 - 2107964 798 206 aa, chain - ## HITS:1 COG:ECs5185 KEGG:ns NR:ns ## COG: ECs5185 COG0545 # Protein_GI_number: 15834439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 206 54 259 259 375 94.0 1e-104 MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKQPAVPVDVVHR ALREIHERADAVRRARFEEMAAEGVKYLEENREREGVNSTESGLQFRVINQGDGAIPART DHVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIAGWIEALTLMPVGSKWELTIPHNLA YGERGAGASIPPFSTLVFEVELLEIL >gi|333596726|gb|GL892086.1| GENE 1973 2108196 - 2108834 682 212 aa, chain + ## HITS:1 COG:ytfB KEGG:ns NR:ns ## COG: ytfB COG3061 # Protein_GI_number: 16132028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Escherichia coli K12 # 1 212 13 224 224 268 75.0 5e-72 MPGRFELKPTLAKIWHAPDNFRIMDPLPPLHRRGIIIGALLIVIGFLLPSGSDNVDTAPV SRNAELDIQSQSQPQPDSQPMQTQLVTPSNDPGQVAPVEPEPVQEDQEQAAAPSAPQAQQ PTGIEQQWRSYRVEPGKTLAQLFRDHNLPATDVYAMAQVEGAGKPLSNLQNGQMVQIRQN ASGVVTGLTIDTGNGQQVLFTRQPDGSFIRAR >gi|333596726|gb|GL892086.1| GENE 1974 2108881 - 2109810 1074 309 aa, chain - ## HITS:1 COG:STM4395 KEGG:ns NR:ns ## COG: STM4395 COG0697 # Protein_GI_number: 16767641 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 306 1 305 308 420 77.0 1e-117 MDTALPTPVFARRHVAYACATLCCLLWGSSYPAIKSGYELFQIATDDIPSKVVFAGYRFL FAGALLLLFALAQRKPIGRLTPTQYGQLTILGLTQTTIQYTFFYIGLAYTTGVNGSIMNA TGTFFSVLLAHFIYHNDKLSYNKTLGCVLGFAGVMLVNFHSGLSDFQFVWQGDGFVVLAA FVLSAATLYGKRISQTVDPTVMTGWQLGIGGAVLLAGGYATGGTLEVHSMKAVAVLGYLT LLSSVAFALWSALLKVNRVSMIAPFNFVIPVAGTVLSAIFLGENILDIKYAIALVLVCSG IWWVNKRRA >gi|333596726|gb|GL892086.1| GENE 1975 2109963 - 2110412 715 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146310039|ref|YP_001175113.1| 50S ribosomal protein L9 [Enterobacter sp. 638] # 1 149 1 149 149 280 98 2e-73 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNVEFFEARRAELEAKLAD VLAAANARAEAINALGTVTIASKAGDEGKLFGSIGTRDIADAVTAAGVKVAKSEVRMPNG VLRTTGEHEVDFQVHSEVFAKLVVNVVAE >gi|333596726|gb|GL892086.1| GENE 1976 2110454 - 2110681 385 75 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 4e-35 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|333596726|gb|GL892086.1| GENE 1977 2110686 - 2111000 70 104 aa, chain - ## HITS:1 COG:ECs5177 KEGG:ns NR:ns ## COG: ECs5177 COG2965 # Protein_GI_number: 15834431 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 196 94.0 1e-50 MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIISGHENQ AITHSLTVGSAVIVQGFISCHKAKNGLSKMVLHAEQIDLIDSGD >gi|333596726|gb|GL892086.1| GENE 1978 2111007 - 2111402 670 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228578711|ref|YP_002847056.1| 30S ribosomal protein S6 [Citrobacter sp. 30_2] # 1 131 1 131 131 262 97 4e-68 MRHYEIVFMVHPDQSEQVPGMIERYSAAITGAEGTIHRLEDWGRRQLAYPINKLHKAHYV LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET ADDSDAGDSEE >gi|333596726|gb|GL892086.1| GENE 1979 2111745 - 2112020 172 91 aa, chain + ## HITS:1 COG:no KEGG:ECL_00593 NR:ns ## KEGG: ECL_00593 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 91 1 91 91 138 90.0 6e-32 MKRIATAILAALLLSANAMAAIKIDSRQARNMDDVQSLGVIYINHNFATESEADQALNEE TDAQGAKYYHVILTREPGSNGNMHASADIYQ >gi|333596726|gb|GL892086.1| GENE 1980 2112154 - 2112840 797 228 aa, chain - ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 420 87.0 1e-118 MLKLKQQVFEANMDLPRYGLVTFTWGNVSAIDREQGLVVIKPSGVAYDAMNVDDMVVVDL EGNVVEGKWRPSSDTATHLALYQRYPSLGGVVHTHSTHATAWAQAGLAIPALGTTHADYF FGDIPCTRALTQAEVEGEYELNTGRVIIETLGETEPLHTPGIVVYQHGPFSWGKDAHDAV HNAVVMEEVARMAWIARGINPQLQGIDDYLMNKHFMRKHGPNAYYGQK >gi|333596726|gb|GL892086.1| GENE 1981 2112833 - 2113693 1100 286 aa, chain - ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 283 1 283 284 553 93.0 1e-157 MLSKQVPLGIYEKALPAGECWLERLQLAKQLGFDFVEMSVDETDERLARLDWSREQRLAL VSAIAETGVRVPSMCLSAHRRFPLGSEDDAVRAEGLEIMRKAIRFAQDVGIRVIQLAGYD VYYQEANDETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTRPGVFKNVPFGTGVVDFERCFQTLK QTGYCGPYLIEMWSETADDPAAEVAKARDWVRERMARAGLMEAEHA >gi|333596726|gb|GL892086.1| GENE 1982 2113703 - 2114353 976 216 aa, chain - ## HITS:1 COG:STM4386 KEGG:ns NR:ns ## COG: STM4386 COG0269 # Protein_GI_number: 16767632 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 412 96.0 1e-115 MSLPMLQVALDNQTLSHAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVL ADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGFWTWE QAQEWRDAGIQQVVYHRSRDAQAAGVAWGEADISAIKRLADMGFKVTVTGGLALEDLPLF KGIPIHVFIAGRSIRDAESPVEAARQFKRSIAQLWG >gi|333596726|gb|GL892086.1| GENE 1983 2114366 - 2114833 704 155 aa, chain - ## HITS:1 COG:STM4385 KEGG:ns NR:ns ## COG: STM4385 COG1762 # Protein_GI_number: 16767631 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 154 1 154 154 278 92.0 3e-75 MKLRDSLAENNSILLQAEASTWQEAVKLSVDLLVKADVVEPRYYQAILDGVAQFGPYFVI APGLAMPHGRPEEGVKKTGFALVTLKKPLVFNHEDNDPVDILITMAAVDANTHQEVGIMQ IVNLFEDEANFDRLRACRTAQDVLDLIDNATAAAV >gi|333596726|gb|GL892086.1| GENE 1984 2114843 - 2115148 366 101 aa, chain - ## HITS:1 COG:STM4384 KEGG:ns NR:ns ## COG: STM4384 COG3414 # Protein_GI_number: 16767630 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 101 1 101 101 193 98.0 5e-50 MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELNGADIIIASTHI AGEISVSGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK >gi|333596726|gb|GL892086.1| GENE 1985 2115161 - 2116561 1686 466 aa, chain - ## HITS:1 COG:sgaT KEGG:ns NR:ns ## COG: sgaT COG3037 # Protein_GI_number: 16132015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 465 20 484 484 784 95.0 0 MEILYNVFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNIIYVL LRRITGIRTIMLTGHIMFQQAGLIAVSLYIFGYPMWTTVICTAVLVSLYWGITSNMMYKP TQDVTDGCGFSIGHQQQFASWIAYKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TIFFGAILLSFGIDVVQAMAGKTHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVGCGSSILIIPGFIPM FFSNATIGVFANHFGGWRAALKICLVMGMVEIFGCVWAVKLTGMSAWMGMADWSILAPPM MQGFASVGLVFMAVIILIALTYMFFAGRSLRAEEDAEKQTAEVSAH >gi|333596726|gb|GL892086.1| GENE 1986 2116921 - 2117985 1246 354 aa, chain + ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 354 3 356 356 736 96.0 0 MSKVKTITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGANICV DFWCGTGKQSHGNPLMKKGHQMQRMAGVEKLQPNLRTTPFVLDPFAIRQIDAVLSTHDHN DHIDVNVAAAVMQNCADDVPFIGPQTCVDLWIGWGVPKERCIVMKPGDVVKIKDIEIHAL DAFDRTALITLPADQKAAGVLPDGMDERAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEH QIDVALGSYGENPRGITDKMTSADMLRMAEALNTKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTWPLDKDNLEYHYPRGFDDCFTIEPDLPFKSFL >gi|333596726|gb|GL892086.1| GENE 1987 2118096 - 2118851 842 251 aa, chain + ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 454 91.0 1e-128 MTEAQRHQILLELLAQTGFITVEKVIERLGISPATARRDINKLDESGKLKKVRNGAEAIS QQRPRWTPMNIHQAQNHDEKVRIARAASQLVNPGESVVINCGSTAFLLGREMCGKPVQII TNYLPLANYLIDQEHESVVIMGGQYNKSQSITLSPQDSENSLYAGHWMFTSGKGLTADGL YKTDMLTAMAEQNMLNVVGKLVVLVDSSKVGERAGMLFSRAEQISMVITGKNANPEILSK LEDQGVTVLRV >gi|333596726|gb|GL892086.1| GENE 1988 2118848 - 2119570 733 240 aa, chain - ## HITS:1 COG:STM4380 KEGG:ns NR:ns ## COG: STM4380 COG1073 # Protein_GI_number: 16767626 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Salmonella typhimurium LT2 # 1 240 1 249 249 312 66.0 4e-85 MIEIETHQLSEHEIIHAFPAGKGEQPLPTVVFYHGFLSSKLVYSYFAVALAQAGFRVVMP DAPNHGARFTGDEQARLGLFWQTLHGNLTEFAGLRDALLQAGLVEGKRLAVAGASMGGMT ALGIMSRHPEVTSVACLMGSGYFTSLAKTLFPPQAPQEIEALLSEWDVSHALAQLADRPL LLWHGDADDVVPPGETFRLQQALQREGLDSNLTCLWGAGVRHRITPAALESTVEFFRQHL >gi|333596726|gb|GL892086.1| GENE 1989 2119735 - 2120037 225 100 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0368 NR:ns ## KEGG: Ent638_0368 # Name: not_defined # Def: putative biofilm stress and motility protein A # Organism: Enterobacter_638 # Pathway: not_defined # 1 100 3 102 102 163 84.0 2e-39 MRRLTALLLVSLLSGCSVLQGTPEPAPPVTDHPQEIRRNQTEGLQRLGTVSAMVRGSPDD AEDAIEAQAVAAKADYYVITMIDETIITGQWYAQGILYRK >gi|333596726|gb|GL892086.1| GENE 1990 2120186 - 2120461 228 91 aa, chain + ## HITS:1 COG:no KEGG:ECL_00582 NR:ns ## KEGG: ECL_00582 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 90 5 94 95 137 88.0 1e-31 MKRTLALTTLMLSAGLLSTTAQSAEFASADCVTGLNEIGQISVNNITGSPQDVERVVALK ADEQGASWYRIVQMQEDHHVNHWRVQAILYA >gi|333596726|gb|GL892086.1| GENE 1991 2120632 - 2122563 2040 643 aa, chain + ## HITS:1 COG:RSc3136 KEGG:ns NR:ns ## COG: RSc3136 COG0840 # Protein_GI_number: 17547855 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Ralstonia solanacearum # 10 641 16 660 661 399 39.0 1e-111 MITFFRRAGLGTKLSLLTGASVATLFLLFTFLLSHNASQQLEDLAVEDLHNQSTGMVDMV QMFNTSLSEEVESYTRLFTTFLPQPLTRDSSQSRTINGLTVPLLKGGETVLHENNTLSDD FLSRTGAISTLFVRSGNDFIRVATSLRKENGDRAIGTVLDTTSPAFAAVTRGEVYRGLAL LFGKRYITQYQPVKNAEGQVIGIIFVGVDITHSWNVMREKILNRRLGESGHFFVLDRSNG KTRGQYLFHASEEGKLPNWDTATQQQLLSDKAGTLERVSADGRTLKVAYTPLPGWNWTIV GEVDKAVLLSSVTTLRDRFLMAGVVLSALFAGLFVILIRRMLTRPLRAVIALARQYAAGD LRASLPVTRQDEVGQLIDAINGIGGGLQKIVLQVREAASEIHLGTNALASDTGEISEQIN KQASSVEETSASMEQLAATVQQNAANMEQTQQLVGETSRAVHQGGETVTHAVSTMDDIRD ASKRIEDITRVIESIAFQTNILALNAAVEAARAGEHGKGFAVVAQEVRALAARSANAVKE IEQLIGDTLNKVSEGHALSEQTRLAMDAIIVHIDNISQLVTGINHASREQSAGIGQVNLA MTHIGEASHINADRISRSEQTAQTLREKGSHLTRLVSLFQLKA >gi|333596726|gb|GL892086.1| GENE 1992 2122560 - 2124182 1370 540 aa, chain - ## HITS:1 COG:STM4377 KEGG:ns NR:ns ## COG: STM4377 COG1960 # Protein_GI_number: 16767623 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 537 1 537 540 911 83.0 0 MHWQTHTVFNQPAPLSNSNLFLSDCALRDAVVREGAEWDMDLLASIGQQLGTAESLELGR LANVNPPELLRYDATGERLDDVRFHPAWHLLMQGLCANRVHNLAWEEEARKGAFVARAAR FVLHAQVEAGTLCPVTMTFAATPLLQQSLPKPFHDWLTPLMSDRYDPHLAAGAQKRGLLI GMGMTEKQGGSDVLSNTTKAEKCSDGHYRLVGHKWFFSVPQSDAHLVLAQAKGGLSCFFV PRFLPDGQRNAVRLERLKDKLGNRSNASSEAEFLDASGWLLGEEGEGVRQILKMGGLTRF DCALGSHGLMRRALSVALYHAHQRQTFGKNLIDQPLMREVLSRMALMLEGHTALLFRLAR AWDNRTDPQEAAWARLFTPTAKYSICKAGIPFVAEAMEVLGGAGYCEESELPRLYREMPV NSIWEGSGNIMCLDVLRVLAKQSGILDLLTEDFAQVKGQDRHFDRSWRQLQQKLRKPQEA QGREIAQQLFLLGAGSQMLRHASPPVAQAWCRMMLDTRGGTLMSEQVQNDLLLRATGRVG >gi|333596726|gb|GL892086.1| GENE 1993 2124378 - 2125652 1556 424 aa, chain + ## HITS:1 COG:PA4343 KEGG:ns NR:ns ## COG: PA4343 COG0477 # Protein_GI_number: 15599539 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 5 415 9 419 439 265 38.0 1e-70 MQQDAHKRALIAGSIGNFIEWYEFAVYGFLATVIARNFFQLEGEAELTSLILTWASFAIA FFFRPLGAVVFGRIGDRIGRKPTLIIVLVLMTLATAAIGIVPVYASIGIAAPLIVTLLRI LQGLFAGGEYGGAVSLMTEFAPRGKRGLYGAWQSFTVALGLLAGAGIVALLSVLLSPEAL HDWGWRIPFFLALPMGAVALWLRVSMEETPSFVKQQEKPVVTQASTAATFKTILMGIGRV IVWSAAGYTYLVIMPTYLQSALHTGSNQALLIAVISNIGFALTIIPSGMLSDRIGRRTVM IIATVLLLILALPLLKILQAESSTLAVKAIVVLIAGGLVGMLAGPGPAMLSEMFPTRVRY TGLGLAYSLSNAIFSGCAGLIITGLIKETGNLDIPAYYVMATAVVSIFALMTLRKDDHLR SLEE >gi|333596726|gb|GL892086.1| GENE 1994 2125744 - 2126475 458 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 242 7 246 255 181 39 2e-43 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLMPLIHALEAQGVVIQLANRQYLDE KSEGAVHQGIIARVKPGRQYQENDLPDLIAELDNPFFLILDGVTDPHNLGACLRSADAAG VHAVIVPKDRSAQLNATAKKVACGAAENVPLIRVTNLARTMRLLQEENIWIVGTAGEADH TLYQSKMTGRMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR QRG >gi|333596726|gb|GL892086.1| GENE 1995 2126539 - 2128980 1245 813 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 21 728 4 705 730 484 37 1e-135 MSHDPFQEREAEKYANPIPSREFIIEHLTKREKPANREELAVELNIEGEEQIEALRRRLR AMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGFGFLRVEGRKDDLYLSSEQMKMCIH GDQILAQPLGADRKGRREARVVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPP EEVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPKA VEDQIENLREEVPEESKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPHTPLDNEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS SKGRLTGYKFYEAVMSSHARLTYTKVWHVLQGDQDLREQYAPLVKHIEELHNLYKTLDQA REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP ALFRIHDKPTTEAVTSFRSVLAELGLELPGGNKPEPRDYAELLESISDRPDAEMLQTMLL RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAHEQGHKGNTTETG GYHYSMEEMLQLGQHCSMTERRADEATRDVADWLKCDFMLDQVGNVFKGVIASVTGFGFF VRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVKVEAVNMDDRKI DFSLISSERAPRNVGKTEREKAKKGGNAKAGGKRRQAGKRVNFEPDSAFRGEKKQKPKAA KKDARKAKKPSTKTQKIAAATKAKRAAKKQQAE >gi|333596726|gb|GL892086.1| GENE 1996 2129019 - 2129321 226 100 aa, chain - ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 100 42 141 141 187 94.0 4e-48 MVKIINQLSRAGYVAAVRGKNGGIRLGKPAQSIRIGDVVRELEPLSLVNCSSAFCHITPA CRLKQALSTAVQSFLKELDNYTLADLVEENQPLYKLLLVE >gi|333596726|gb|GL892086.1| GENE 1997 2129638 - 2130936 1533 432 aa, chain - ## HITS:1 COG:ECs5153 KEGG:ns NR:ns ## COG: ECs5153 COG0104 # Protein_GI_number: 15834407 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 835 95.0 0 MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVTSIIGNGVVLSPAALMKEMKGLEDRGIPVRERLLLSEACPLILDYHVALDVAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKATFAEKLKEVMEYHNFQLVNFYKAE AVDYQKVLDDVMAIADILTGMVVDVSDLLDQARKRGDFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGLGPRYVDYVLGIIKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA TTGRRRRTGWLDAVAVRRAVQINSLSGFCLTKLDVLDGLKEVKICVGYRMPDGREVTTTP LAADDWEGIEPIYETMPGWSETTFGVKERSGLPQAALDYIKRIEELTEVPIDIISTGPDR TETMILRDPFDA >gi|333596726|gb|GL892086.1| GENE 1998 2131041 - 2131238 242 65 aa, chain - ## HITS:1 COG:YPO0377 KEGG:ns NR:ns ## COG: YPO0377 COG3242 # Protein_GI_number: 16120712 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 65 1 65 66 73 80.0 8e-14 MNSTIWLALALVLVLEGLGPMLYPRAWRRMIATMSQLPDNILRRFGGGLVVAGIVIYYML RKTIG >gi|333596726|gb|GL892086.1| GENE 1999 2131310 - 2132314 1453 334 aa, chain - ## HITS:1 COG:ECs5151 KEGG:ns NR:ns ## COG: ECs5151 COG0330 # Protein_GI_number: 15834405 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 520 89.0 1e-147 MRKSVIAIIIIALVVLYTSIFVVKEGERGIKFQFSSVVRDGDKRPVIYEPGLHFKIPFIQ SVKTLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYFLATGGGDVSQAEVLLK RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVETPAADDAIAKAAE RVQAETNGKVPVINPNSMAALGIEVVDVRIKQINLPAEVSEAIYNRMRAEREAVARRHRS QGQEEAEKLRAAADYEVTKTLAESERQGRILRGEGDAEAAKLFADAFSQDPDFYAFIRSL RAYENSFQSNQDVMVLSPDSDFFRYMKTPTNATR >gi|333596726|gb|GL892086.1| GENE 2000 2132317 - 2133576 1485 419 aa, chain - ## HITS:1 COG:STM4363 KEGG:ns NR:ns ## COG: STM4363 COG0330 # Protein_GI_number: 16767609 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Salmonella typhimurium LT2 # 1 419 1 419 419 611 87.0 1e-175 MAWNQPGNNGQDRDPWGSSNNQGGNSGGNGNKGGREQGPPDLDDIFRKLSKKLGGLGGGK GSGSGGNATQSPRPPMGGRVVGIVAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP GLNWKPTFIDDVTAVNVESVRELAASGVMLTSDENVVRVEMNVQYRVTDPERYLFSVTSA DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYNMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILE AQGEVARFAKILPEYKAAPEITRERLYIETMEKVLSHTRKVLVNDNKGGNLMVLPLDQML KGGSAPAAKDNSGANNLLRLPPASSGSASANTTPSSNDGDIMDQRRANAQRNDYQRQGE >gi|333596726|gb|GL892086.1| GENE 2001 2133633 - 2134913 705 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 50 398 55 407 425 276 45 3e-72 MFDRYDAGEQAVLVHIYFSQDKDMEDLQEFESLVSSAGVEAMQVITGSRKAPHPKYFVGE GKAVEIADAVKATGASVVLFDHALSPAQERNLEALCECRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRGRITQILSRLER VEKQREQGRRARTKADIPTVSLVGYTNAGKSTLFNQITEAQVYAADQLFATLDPTLRRID VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIDAVNV VLEEIDAHEIPTLLVMNKIDMLDDFEPRIDRDEENKPIRVWLSAQAGIGVPLLFQALTER LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEDDGSVGMQVRMPIVDWRRLCKQEPA LADYIV >gi|333596726|gb|GL892086.1| GENE 2002 2134988 - 2135299 290 103 aa, chain - ## HITS:1 COG:STM4361 KEGG:ns NR:ns ## COG: STM4361 COG1923 # Protein_GI_number: 16767607 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Salmonella typhimurium LT2 # 1 103 1 102 102 171 94.0 4e-43 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNAGGGTGSNYHHGSNAQGSSAPAQDSEETE >gi|333596726|gb|GL892086.1| GENE 2003 2135385 - 2136290 550 301 aa, chain - ## HITS:1 COG:miaA KEGG:ns NR:ns ## COG: miaA COG0324 # Protein_GI_number: 16131993 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Escherichia coli K12 # 1 300 16 315 316 550 93.0 1e-156 MGPTASGKTALAIELRKVLPVELISVDSALIYRGMDIGTAKPNADELRAAPHRLLDILDP AQAYSAADFRRDALAEMAEITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRAKIEQ QAAEQGWDVLHKQLEEIDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPY QVHQFAIAPASRELLHQRIEQRFHQMLASDFEAEVRALFARGDLHTDMPSIRCVGYRQMW SYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPQQALNEVIEVVGDIA D >gi|333596726|gb|GL892086.1| GENE 2004 2136328 - 2138172 1607 614 aa, chain - ## HITS:1 COG:STM4359 KEGG:ns NR:ns ## COG: STM4359 COG0323 # Protein_GI_number: 16767605 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Salmonella typhimurium LT2 # 1 614 1 618 618 942 80.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQEA WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEIIRRIAL ARFDVTLNLSHNGKVMRQYRAVAEGGQKERRLGAICGTPFLEKALSIEWQHGDLALRGWV ADPNASSAAFAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVAAVLQQQAEPELPLAKEEPAPRPLPENRVAAGRN HFAEPAVAREPAAPRLSPAGNAPRPTGANYPNAQPGYQKQQGALYRKLLDTPAVEHKEHI TVSPPSLDGHSQSFGRVLTIVAPDMALLEREGKLLLLALSVAERWLKQAQLTPGVNAACA QPLLIPVRLKISPEETGVLRRVQTQLAEMGIEIVLDAQHVTIRAVPLPLRQQNLQNLIPE LIGYLAQQTTFDAADTAQWIARHLASEHAPWSMAQAITVLAEVERLCPQLVKAPPGGLLQ PVDLQTAMTALKHD >gi|333596726|gb|GL892086.1| GENE 2005 2138182 - 2139522 1349 446 aa, chain - ## HITS:1 COG:STM4358 KEGG:ns NR:ns ## COG: STM4358 COG0860 # Protein_GI_number: 16767604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Salmonella typhimurium LT2 # 1 446 1 439 439 689 84.0 0 MINRVKGWVLAATVLLCAQAGAASLSDIQVSNGDSQARITFSFMGDPEYAFSQIDSRSVA LDIKQTGVIQGLPLQFSGNNLVKSIRSGTPKDAQSLRLVVDLTEKGKTKAVKQQNGANYT VVFTINADVPPPPPPAPVVAKRVEAPVYTPRPSEPARNPFKSQNDRLTAVTSSNTVTRPA VSARRTPVSGDKVIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGV MTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRNATGASVWVLSNRRANSEMANWL EEHEKQSELLGGAGDVLANSQADPYLSQAVLDLQFGHSQRVGYDVATNVLNQLQSIGSLH KRRPEHASLGVLRSPDIPSILVETGFISNHGEERLLGSDNYQQQIAEAIYNGLRKYFDAH PLQSAPQGGAAQTASAALPGEMTATN >gi|333596726|gb|GL892086.1| GENE 2006 2139539 - 2140000 478 153 aa, chain - ## HITS:1 COG:STM4357 KEGG:ns NR:ns ## COG: STM4357 COG0802 # Protein_GI_number: 16767603 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Salmonella typhimurium LT2 # 1 152 1 152 153 293 91.0 6e-80 MTNRAIPLPDEQATLDLGKRVAQACQGATVIYLYGDLGAGKTTFSRGFLQALGHNGNVKS PTYTLVEPYTLENIMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGAGVLPDP DVEIHLDYQAQGREARISAVSSSGCSLLARLAG >gi|333596726|gb|GL892086.1| GENE 2007 2139993 - 2141516 1083 507 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 13 498 3 490 490 421 44 1e-116 MTDHTVKKNPASIPHSIWHADDLRRAEKEAADSLGITLYELMQRAGEAAFNVARMAYPDA SHYLILCGHGNNGGDGYVVARLAVAAGLRVTLLALESDKPLPEEAGLAREAWLNAGGIIH APDIVWPDDVDVIVDGLLGTGLMRAPRDNVAALITRANAHPAPVVALDIPSGLMAETGAT PGEAIEAAHTVTFIALKPGLLTGKARDVVGTLHYTALGLENWLAGQDTHITRVDASRLTQ WLPPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRCGAGLVRVLTRSENIPPIITA RPELMVHELTPETLEESLEWADVVVIGPGLGQQSWGKAALQKVENFRKPMLWDADALNLL AINPDKRHNRILTPHPGEAARLLNCSVAEIESDRLLSAQRLVKRYGGVAVLKGAGTVIAS DDATGIIDAGNAGMASGGMGDVLSGIIGALLGQKLPLYDAACAGCVAHGAAADRLAARYG TRGMLATDLFCTLRRVVNPDVIDVEND >gi|333596726|gb|GL892086.1| GENE 2008 2141515 - 2142654 1018 379 aa, chain + ## HITS:1 COG:yjeS KEGG:ns NR:ns ## COG: yjeS COG1600 # Protein_GI_number: 16131988 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 378 1 378 379 727 91.0 0 MSQPLDLNELAQKIKQWGAELGFQKVGITDTDLSASEPKLQAWLDKQYHGEMEWMARHGM MRARPHELLPGTLRVISVRMNYLPANAAFARTLKNPSLGYVSRYALGRDYHKLLRNRLKK LGETIQQHCVSLNFRPFVDSAPILERPIAEKAGLGWTGKHSLILSRDAGSFFFLGELLID LPLPIDGPVEEGCGRCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEEFRPLIG NRIYGCDDCQLICPWNRYSQLTDEEDFSPRKALHAPQLIELFAWSEAWFLKVTEGSAIRR IGHLRWLRNVAVALGNAPWDEANLQALESRRGEHPLLDEHIEWAIAQQIEKRNAGVVEVQ LPKKQRLVRVIEKGLPRDV >gi|333596726|gb|GL892086.1| GENE 2009 2143564 - 2144109 814 181 aa, chain - ## HITS:1 COG:orn KEGG:ns NR:ns ## COG: orn COG1949 # Protein_GI_number: 16131987 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Escherichia coli K12 # 1 181 24 204 204 357 96.0 6e-99 MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDDQLALMDE WNVRTHTGSGLVERVKASTLGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM PELESYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYRENFIK L >gi|333596726|gb|GL892086.1| GENE 2010 2144193 - 2145269 946 358 aa, chain + ## HITS:1 COG:STM4349 KEGG:ns NR:ns ## COG: STM4349 COG1162 # Protein_GI_number: 16767598 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 358 1 358 358 669 91.0 0 MGDQEPARLSKNKLSKGQQRRVNANHQRRLKTTTEKPDYDDNLFGEATEGVVISRFGMHA DVESADGDIHRCNIRRTIRSLVTGDRVVWRPGKEAAEGVTVKGIVEAVHERTSVLTRPDF YDGVKPIAANINQIVIVSAILPELSLNIIDRYLVACETLQVEPLIVLNKIDLLDDEAMAF VNEQMDIYRNIGYRVLMVSSRTKDGLKPLEDALTDRISIFAGQSGVGKSSLLNNLLGLQQ AILTNDVSDVSGLGQHTTTASRLYHFPHGGDVIDSPGVREFGLWHLEPEQIFNGFVEFHD YLGACKYRDCKHDNDPGCAIREAVENGEIAETRFENYHRILESMDQVKTRKNFSDSDN >gi|333596726|gb|GL892086.1| GENE 2011 2145325 - 2146335 1147 336 aa, chain + ## HITS:1 COG:ECs5139 KEGG:ns NR:ns ## COG: ECs5139 COG0688 # Protein_GI_number: 15834393 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Escherichia coli O157:H7 # 15 335 1 321 322 636 94.0 0 MPDQERQNNGLEATLLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYK VDMKEAQKPDTASYRTFNEFFVRPLRDEVRPLNTDPNVLVMPADGVISQLGKIEDDKILQ AKGHNYSLEALLAGNYLMADLFRNGTFATTYLSPRDYHRVHMPCNGILREMIYVPGDLFS VNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGVIK RWTWPAGEEDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVDELESLSVTKLGQPLAVS TEVFATPDVAPAPLPEEEIKAEHDASPLVDDKKDEG >gi|333596726|gb|GL892086.1| GENE 2012 2146379 - 2149678 3421 1099 aa, chain + ## HITS:1 COG:ECs5138 KEGG:ns NR:ns ## COG: ECs5138 COG3264 # Protein_GI_number: 15834392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1099 9 1107 1107 1838 88.0 0 MAWCLSMGAYAATAPDAKQITQELEQAKAAKPAQPETVESLQSALNALEERKGSLERAQQ YQQVIDNFPKLSQTLRSQLNNLRDEPRQVPAGMTSEALNQEILQVSSQLLEKSRLAQQEQ ERAREIADSLSQLPQQQTDARRQLNEVERRIGTQTGNTPQNQAQNLGLQAESARLKALVD ELELAQLSANNRQELSRMRSELAQKQSQQLDAYLQALRNQLNSQRQREAERALESTELLA ENSANLPDSIVAQFKVNRELSAALNQQAQRMDLVASQQRQATNQTLQVRQALNTLREQSQ WLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLHYEDLLNKQPQIRQIRQADG QPLTGEQSRILEAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKEVNEATHRY LFWTSDVRPMTFAWPIEIVQDLRRLISLDTFSQLGLASVMMITSKETIFPLLGALILVGF SIYSRRHFTRFLERSSARVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLGYGLREAWP YPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRNRVARAMRYYLMSIGLIV PLIMALIMFDNLNDREFSGSLGRLCFMLICGALAVVTLSLKRAGIPLYLDKTGSGDNMFN RLLWNLLLSAPLAAMLAAAVGYLATSQALLARLETSVAIWFLLLVVYHVIRRGMLIQRRR LAFDRAKHRRAEILAQRARGEEEPNHVNSTEGTTDADDVELDLDAISTQSLRLVRSILML VALLSVIFLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVLIITTQLI RNFPALLELALLQHLDLTPGTGYAITTITKYLIMLFGGLVGFSMIGIEWSKLQWLVAALT VGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRDLTGSVTRINTRATTISDWDRKEII VPNKAFITEQFINWSLSDSVTRVVLTVPAPSDANSEEVTQILYTAAERCSLVIDNPPPEV FLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQMRLETLDG RKTGRTLTSAARTRPAGSL >gi|333596726|gb|GL892086.1| GENE 2013 2149715 - 2151193 1782 492 aa, chain - ## HITS:1 COG:yjeM KEGG:ns NR:ns ## COG: yjeM COG0531 # Protein_GI_number: 16131981 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 483 22 504 514 740 84.0 0 MTLTGLILMIFTSVFGFANSPSAFYLMGYSATPFYIVSALFFFIPFALMMAEMGSAYRKE EGGIYSWMNNSVGPRYAFIGTFMWFSSYVVWMVSTAAKVWVPFSTFLFGADKTQVWSLAG LSSTQVVGILAVCWMVVVTLVASKGINKIARITAVGGISVMCLNLVLLLVSIAILCLNGG HFAQEVNFVSSPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIIFA AIVISIGYSLAIFLWGVSTNWQQVLSNNTTNLGNITYVLMKSLGMTLGNAMDLAPETSAT LGVWFARITGLSMFLAYTGAFFTLIYSPLKAIIQGTPKALWPAGMTQLNAAGMPANAMWM QCLLVCVFILLVSFGGDTASAFYNKLTLMANVSMTLPYLFLTLAFPFFKAKQDLERPFVI FKTRAATLLATTVVVLVVAFANIFTVIQPVVEANDWNSTLWMVGGPIFFSLLAMGIYEHY RRRSTACVAEVA >gi|333596726|gb|GL892086.1| GENE 2014 2151393 - 2152370 1442 325 aa, chain - ## HITS:1 COG:STM4344 KEGG:ns NR:ns ## COG: STM4344 COG2269 # Protein_GI_number: 16767593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Salmonella typhimurium LT2 # 1 325 1 325 325 617 93.0 1e-176 MSETATWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRF VGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEWYRP HYDMYRLMNEVDDLLQQVLDCAEAETLSYQQAFQRHLEIDPLSADKTQLREVAAKLDLSN VADTEEDRDTLLQLLFTFGVEPQIGKDRPTFVYHFPASQASLAQISTEDHRVAERFEVYF KGIELANGFHELTDAREQQQRFEQDNRKRNARGLPQQPIDTHLLEALKAGLPDCSGVALG VDRLVMLALGAEQLGDVIAFTVDRA >gi|333596726|gb|GL892086.1| GENE 2015 2152804 - 2154471 1913 555 aa, chain + ## HITS:1 COG:STM4343 KEGG:ns NR:ns ## COG: STM4343 COG1053 # Protein_GI_number: 16767592 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Salmonella typhimurium LT2 # 1 555 42 596 596 1113 97.0 0 MRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWG CPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDI LVDDGHARGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHG VPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNK YMELGPRDKVSQAFWHEWRKGNTISTPRGDVVHLDLRHLGEKKLLERLPFICELAKAYVG VDPVKEPIPVRPTAHYTMGGIETDQQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELV VFGRMAGERAMERAATAGEANSAALDAQVADVEKRLKDLVNQEGNENWSKIRDEMGLSME EGCGIYRTPELMQKTVDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAH SALARKESRGAHQRLDEGCTERDDVNFLKHTLAWRDADGTTRLDYSDVKITTLPPAKRVY GAEAEAADKKEKANG >gi|333596726|gb|GL892086.1| GENE 2016 2154464 - 2155198 968 244 aa, chain + ## HITS:1 COG:STM4342 KEGG:ns NR:ns ## COG: STM4342 COG0479 # Protein_GI_number: 16767591 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Salmonella typhimurium LT2 # 1 244 1 244 244 491 94.0 1e-139 MAEMQKLKIEVVRYNPEVDAAPHSAFYEVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM AICGSCGMMVNKVPKLACKTFLRDYTKGIKVEALGNFPIERDLVVDMTHFIESLEAIKPY IIGNPRTPDQGPNTQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NEDSRDHGKKERMAQLNSQNGVWTCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT LKPR >gi|333596726|gb|GL892086.1| GENE 2017 2155209 - 2155604 534 131 aa, chain + ## HITS:1 COG:ECs5133 KEGG:ns NR:ns ## COG: ECs5133 COG3029 # Protein_GI_number: 15834387 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 197 83.0 4e-51 MTTKRKAYVRPMPSTWWKKLPFYRFYMLREGTAVPAVWFSLELMYGVYALKHGPEAWASF VSFLQNPIIVVLNLIVLAAALLHTKTWFELAPKAANIIVKGEKMGPEPVIKGLWAVTAVV SVVILFVALFW >gi|333596726|gb|GL892086.1| GENE 2018 2155615 - 2155974 557 119 aa, chain + ## HITS:1 COG:ECs5132 KEGG:ns NR:ns ## COG: ECs5132 COG3080 # Protein_GI_number: 15834386 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 199 93.0 1e-51 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVIILLVGIMLPLGLFPGDALSYERVLAFAS SFIGRVFIFLMIVLPLWCGLHRIHHAMHDLKIHVPSGKWVFYGLATILTVVTLIAVVTI >gi|333596726|gb|GL892086.1| GENE 2019 2156004 - 2156879 714 291 aa, chain - ## HITS:1 COG:PA4109 KEGG:ns NR:ns ## COG: PA4109 COG0583 # Protein_GI_number: 15599304 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 287 1 287 296 352 63.0 4e-97 MTRSYLPLNSLRAFEAAARHLSFTHAAIELNVTHSAISQHVKTLEQHLNCQLFVRVSRGL MLTTEGENLLPVLNDSFDRIAGMLDRFANHQAQEKLKIGVVGTFATGVLFSQLDDFRRGY PHIDLQLSTHNNRVDPAAEGLDYTIRYGGGAWHGTEAEFLCRAPLAPLCTPDIAASLHSP TDILRFTLLRSYRRDEWTAWMQAAGEHPPSPTHRVMVFDSSVTMLEAAQAGVGIAIAPVD MFTHLLASERIVQPFATKIELGSYWLTRLQSRAETPAMREFSRWLVEKMKK >gi|333596726|gb|GL892086.1| GENE 2020 2157012 - 2157587 589 191 aa, chain + ## HITS:1 COG:ECs5131 KEGG:ns NR:ns ## COG: ECs5131 COG1680 # Protein_GI_number: 15834385 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 2 191 1 187 377 266 70.0 2e-71 MMKKSFCCALLLAISGAALAAPVSEKQLAEVVANTVTPLMKAQAIPGMAVAVIYQGKPHY YTFGEADIAAKKPVTPQTLFELGSISKTFTGVLGGDAIARGEISLDDPVIKYWPELTGKQ WQGIRMLDLATYTAGGLPLQVPEEVTDNASLLRFYQHWQPQWKPGTTRLYANASIGLFGA LAVKPSGMRYE >gi|333596726|gb|GL892086.1| GENE 2021 2157591 - 2158157 621 188 aa, chain + ## HITS:1 COG:ampC KEGG:ns NR:ns ## COG: ampC COG1680 # Protein_GI_number: 16131975 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli K12 # 1 188 190 377 377 281 70.0 5e-76 MTKRVFKPLRLNHTWINVPKAEAAHYAWGYRDGKAVHVSPGMLDAEAYGVKTNVQDMANW VMANMAPENVADASLKQGIALAQSRYWRIGSMYQGLGWEMLNWPVEAKTVIEGSDNKVAL APLPVAEVNPPVPPVKASWVHKTGSTGGFGSYVAFIPEKQIGIVMLANKSYPNPARVEAA YHILDALQ >gi|333596726|gb|GL892086.1| GENE 2022 2158266 - 2158796 501 176 aa, chain + ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 1 174 1 174 177 315 80.0 2e-86 MRILPVIAAVTAAFLVVACSSPTPPPGVTVVSNFDAQRFLGTWYEIARMDHQFERGLEKV TASYSARDDGGIQVINRGYNPDRQMWQQSVGQAYFTGASNRAAMKISFIGPFYGGYNVIA LDREYRHALVCGPDRNYLWLLSRTPTIPAEMKQQMLDIATRQGFDVTKLIWVQQPH >gi|333596726|gb|GL892086.1| GENE 2023 2158793 - 2159110 340 105 aa, chain - ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 140 82.0 8e-34 MSWIVLVVAGLLEVVWAIGLKYTHGFTRLTPSVITIAAMIVSIVMLSWAMRTLPVGTAYA VWTGIGAVGAAITGILLLGESASLARIASLALIVAGIIGLKLSTH >gi|333596726|gb|GL892086.1| GENE 2024 2159373 - 2159972 365 199 aa, chain + ## HITS:1 COG:STM4337 KEGG:ns NR:ns ## COG: STM4337 COG2771 # Protein_GI_number: 16767586 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 196 1 192 195 214 57.0 1e-55 MFKILLIDRCHFTRTGFEAWVNHSDLLSGHFVVTGVNNLFLAREHILQWKPALVIADLSG FRQDLHHFQQLSSLLIASETLPFILLQSGQEQEMTNYLAQYPIWSSLSKNTDLEGLAAVI NDALTSCASAELPEMAAPLLTRQEERVLTLWMDGASNQKIASNLRINGKTVYTYKRNIRM KLHMDTRYSPFLSLQEVEN >gi|333596726|gb|GL892086.1| GENE 2025 2160009 - 2160155 109 48 aa, chain - ## HITS:1 COG:STM4336 KEGG:ns NR:ns ## COG: STM4336 COG5510 # Protein_GI_number: 16767585 # Func_class: S Function unknown # Function: Predicted small secreted protein # Organism: Salmonella typhimurium LT2 # 1 47 1 47 48 60 93.0 6e-10 MVKKTIAAIFSVLVLSSVLTACNTTRGVGEDISDGGNAISGAATKAQN >gi|333596726|gb|GL892086.1| GENE 2026 2160264 - 2160395 76 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295098307|emb|CBK87397.1| ## NR: gi|295098307|emb|CBK87397.1| Predicted small secreted protein [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 43 1 43 43 69 97.0 7e-11 MKRTVKILLLLALSSAILSGCNTARGVGEDIQDLGHIISHAAS >gi|333596726|gb|GL892086.1| GENE 2027 2160453 - 2161019 714 188 aa, chain - ## HITS:1 COG:ECs5128 KEGG:ns NR:ns ## COG: ECs5128 COG0231 # Protein_GI_number: 15834382 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 374 98.0 1e-104 MATYYSNDFRAGLKIMMDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTD SAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNG QPIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|333596726|gb|GL892086.1| GENE 2028 2161060 - 2162088 969 342 aa, chain + ## HITS:1 COG:ECs5127 KEGG:ns NR:ns ## COG: ECs5127 COG1509 # Protein_GI_number: 15834381 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 605 86.0 1e-173 MAHIVTLNTPSREDWLSQLADVITSPDELLRLLDLEQHEALRAGREAKRLFALRVPRAFV ARMEKGNPDDPLLKQTLTSQDEFITAPGYSTDPLEEQNSVVPGLLHKYRNRALLLVKGGC AVNCRYCFRRHFPYAENQGNKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLT QLEAIPHIKRLRIHSRLPIVIPARITDALVTRLEQSRLQVLLVNHINHANEIDADFRAAM ARLRKAGVTLLNQSVLLRGVNDSARVLADLSNALFDAGVMPYYLHVLDRVQGAVHFMVTD DEARKIMRELLTLVSGYMVPKLAREIGGEPSKTPLDLQLRQQ >gi|333596726|gb|GL892086.1| GENE 2029 2162155 - 2162508 385 117 aa, chain - ## HITS:1 COG:no KEGG:ECL_00545 NR:ns ## KEGG: ECL_00545 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 117 1 117 117 187 95.0 1e-46 MRIKVCAGIVGAALLLAGCSTSNELTAAGQSVRFVEDKPGSECQLLGTATGEQSNWMSGQ HGEEGGSMRGAANALRNQAAAMGGNVIYGVSSPTQGMLSSFVPTASQMNGQVYKCPN >gi|333596726|gb|GL892086.1| GENE 2030 2162741 - 2163388 548 215 aa, chain + ## HITS:1 COG:STM4514 KEGG:ns NR:ns ## COG: STM4514 COG3314 # Protein_GI_number: 16767758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 9 210 86 286 294 290 76.0 1e-78 MSASSSGEEKVTWVGYLAFVLTIVFFSGFFAKSTEWWRVLDFTVLNGSFGAVNGALTFRG EGGTGAKDGFLFALELAPSVILSLGIIAVTEGLGGLRAAQQLMTPILRPLLGVPGICSLA LIANLQNTDAAAGMTKELTDEGAITDHERAIFATFQTSGSAIITNYFSSGAALFTFITVP VITPLAVILVFKFVGANFLRLWIAHMEVRRVQEEK >gi|333596726|gb|GL892086.1| GENE 2031 2163385 - 2163846 412 153 aa, chain + ## HITS:1 COG:ECs5287 KEGG:ns NR:ns ## COG: ECs5287 COG0700 # Protein_GI_number: 15834541 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 152 1 152 153 224 81.0 5e-59 MIAQPRKNIMDLFIDGARRGFTIATTSLLPNVVMAFVIIQALKVTGLLDIVGRVCEPIMA LWGLPGAAATVLLASVMSMGGGVGVCASLVAAGTLNGHDATILLPAIYLMGNPVQNTGRC LGTAGVNPKYYPHIITVCVINALLSMWVMQLLF >gi|333596726|gb|GL892086.1| GENE 2032 2163857 - 2165020 1073 387 aa, chain + ## HITS:1 COG:no KEGG:CKO_00306 NR:ns ## KEGG: CKO_00306 # Name: not_defined # Def: isoaspartyl dipeptidase # Organism: C.koseri # Pathway: not_defined # 1 387 1 387 387 561 72.0 1e-158 MDFSVLEPHLFRNAHLYAPEDLGRCDLLIAGGKIVAVEKTGHATTRPDCPESDLAGAVVC PGFIDQHVHLIGGGGEAGPHTRTPEVRLSALVAAGITSVVGLLGTDGVTRHPESLLAKTR ALEHEGISAWMLTGAYGLPSPTITGSIEKDVALIDKIIGVKCAISDHRSSAPADDQLANM AAQSRVGGLLGAKAGISVFHLGNSPKLLEPLLNILNNADVPRTKLLPTHVNRAQALFHAA LDYAREGGYIDITTSISEPVDAATAIATAREAQVPFNRLTLSSDGNGSQPNFDANGNLVG IGVAGFESLLETLQQLVSRYHLPLEEALLPFTRNVAEFLGLEHKGRIAPGCDADFLVMTD DLKIREVWAKGRQMVREGVVCVKGTFE >gi|333596726|gb|GL892086.1| GENE 2033 2165086 - 2166732 2359 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 548 1 547 547 913 86 0.0 MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVASAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLEDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLVIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVGQIRKQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALV RVAAKLAGLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGEGNYGYNA ATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDMPKGDAPDLGAAGGMGG MGGMGGMM >gi|333596726|gb|GL892086.1| GENE 2034 2166772 - 2167065 305 97 aa, chain - ## HITS:1 COG:STM4329 KEGG:ns NR:ns ## COG: STM4329 COG0234 # Protein_GI_number: 16767578 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Salmonella typhimurium LT2 # 1 97 1 97 97 154 96.0 4e-38 MSIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEIIAVGKGRILENGTVQPLDVK VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA >gi|333596726|gb|GL892086.1| GENE 2035 2167244 - 2168491 1238 415 aa, chain + ## HITS:1 COG:ECs5122 KEGG:ns NR:ns ## COG: ECs5122 COG0531 # Protein_GI_number: 15834376 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 413 1 413 418 590 82.0 1e-168 MSGLRQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIVLVFPVAIVFA ILGRHFPSAGGVAHFVGMAFGPRMERVTGWLFLSVIPVGLPAALHIATGFGQALFGWHDE QLLLAELGTLAIVWWVGSRGASSSANLQTLVAVLIVALIVAIWFAGDITVADIPFPAMND IDHTQLFAALSVMFWCFVGLEAFAHLASEFKQPERDFPRALMIGLLLAGTVYWACTVLVL HFNAFGEEKAAAASLPGIVVQLFGVKALWVACVIGYLACFASLNIYIQSFARLVWSQALY KPDSRLSRLSKRQLPVNALNTVLGCCVVSSLGIYLLDINLDALIVYANGIFIMIYLLCML AGCRLLKGRFKALAAVGCVLCLLLLAMVGWKSVYAIVMLAGLWVFLPKRKNPQAR >gi|333596726|gb|GL892086.1| GENE 2036 2168515 - 2168985 452 156 aa, chain - ## HITS:1 COG:STM4327 KEGG:ns NR:ns ## COG: STM4327 COG3030 # Protein_GI_number: 16767576 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Salmonella typhimurium LT2 # 2 156 13 169 171 235 87.0 3e-62 MPVRWIPFIAFFLYVYIEISIFIQVAHVLGVLLTLILVIFTSVIGMSLVRNQGFKNFLLM QQKMAAGESPAAEMIKSVSLIIAGFLLILPGFFTDFLGLLLLLPPVQKHLTMKLLPHLRF SRMPGGGFSTGPGDTFEGEYQRKDDQRDRLDHKDDR >gi|333596726|gb|GL892086.1| GENE 2037 2169315 - 2170751 1834 478 aa, chain + ## HITS:1 COG:ECs5120 KEGG:ns NR:ns ## COG: ECs5120 COG1027 # Protein_GI_number: 15834374 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Escherichia coli O157:H7 # 1 478 16 493 493 872 93.0 0 MLNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNSKISDIPEFVRGMVMVKKAAAL ANKELQTIPKSAANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYASVVKLVDAINQLGDGFQRKAVE FQDILKMGRTQLQDAVPMTLGQEFHAFNVLLNEETKNLLRTSELLLEVNLGATAIGTRLN TPDGYQQLAVQKLAEVSNLPVVPAEDLIEATSDCGAYVMVHSALKRLAVKLSKICNDLRL LSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMASEAGQLQ LNVMEPVIGQAMFESIHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIG HHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSAQNLMHPAYKAKRYTDESEQ >gi|333596726|gb|GL892086.1| GENE 2038 2170868 - 2172169 1778 433 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 445 62.0 1e-125 MFGAELVIVLLAIYLGARLGGIGIGFAGGLGVLVLTLIFQIKPGAIPFDVIEIIMAVIAA IAAMQVAGGMDYLVSLAERMLRRHPKYITFLAPLVTWFMTILAGTGHTAFSTLPVITEVA KEQGIRPSRPLSIAVVASQIAITASPISAAVVFFAGILEPMGVSYLTLLAICIPVTLIAV MITAVLCNFLGAELKDDPVYQERLAKGEVSLRGSQVFELKPHAKRSVLLFLIGIVAVMFY ATAISDTVGLIQNPVLPRNEAIVVFMLTIATLISITCKIDTSEVLNASTFKSGMSACVCV LGVAWLGDTFVKAHISDIQTVAGDLLHNYPWLLAVVLFFAATLLYSQAATTKALMPAALM LGVTPLTAIASFAAVSALFVLPTYPTLLAAVEMDDTGSTRIGKYVFNHAFLIPGVVAITL CVILGFIIGGIVL >gi|333596726|gb|GL892086.1| GENE 2039 2172283 - 2172606 128 107 aa, chain + ## HITS:1 COG:STM4324 KEGG:ns NR:ns ## COG: STM4324 COG1324 # Protein_GI_number: 16767573 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Salmonella typhimurium LT2 # 1 107 9 115 115 179 86.0 1e-45 MNTPDAVVVLCTAPDEASAQDLAAKVLAEKLAACVTLLPGATSLYYWEGKLEQEYEVQML LKTNLTNQQALLDCLKSHHPYQTPELLVLPVVHGDNDYLSWLNASLR >gi|333596726|gb|GL892086.1| GENE 2040 2172582 - 2174291 1647 569 aa, chain + ## HITS:1 COG:STM4323 KEGG:ns NR:ns ## COG: STM4323 COG4232 # Protein_GI_number: 16767572 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Salmonella typhimurium LT2 # 1 569 1 567 567 927 83.0 0 MAQRFFTLILLLCSTSVFAGLFDAPGRSNFIPADQAFVFDFQQNQHDLSLTWQVKEGYYL YRKQVSITPAKANVGALQMPAGEWHEDEFYGKSEIYRQRLSVPVTVNHADKGATLTVTYQ GCADASFCYPPETKVVPLTEVKAAASPLPSGERARVRGEGEGEAASDLPFSALWALLIGI GIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLAFIYVQGMTLTYTALGLVVAAAGLQF QAALQHPYVLIGLSAVFILLALSMFGLFTLQLPSSLQTRLTLISNRQQGGSAGGVFAMGA IAGLICSPCTTAPLSAILLYIAQSGNLWLGGGTLYLYALGMGLPLILVTVFGNRLLPKSG PWMETVKTAFGFVILALPVFLLERIVGDVWGIRLWAMLGVAFFGWAFIVSLGAKKAWMRL VQILLLAGALVSARPLQDWAFGSPVAQTQAHLNFTQIKNVDELNSALAQAKGKPVMLDLY ADWCVACKEFEKYTFSDPQVQRALSDTVLLQANVTANNAQDKALLKQLNVLGLPTILFFN EQGEEQPTQRVTGFMDATAFNAHLRNRQP >gi|333596726|gb|GL892086.1| GENE 2041 2174341 - 2174916 652 191 aa, chain + ## HITS:1 COG:ECs5116 KEGG:ns NR:ns ## COG: ECs5116 COG1309 # Protein_GI_number: 15834370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 191 9 199 199 333 86.0 8e-92 MQREDVLGQALQLLEIQGIASTTLEMVADRIDYPLDELKRFWPDKEALLYDALRYLSQQV DIWRRQLMLNDELTTEQKLLARYTALTECVTNNRYPGCLFIAACTYYPDPGHPIHQLADQ QKRAAHEFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILR FAQCRMGGALT >gi|333596726|gb|GL892086.1| GENE 2042 2174913 - 2175503 441 196 aa, chain - ## HITS:1 COG:PA2916 KEGG:ns NR:ns ## COG: PA2916 COG1280 # Protein_GI_number: 15598112 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 2 182 3 183 197 111 46.0 7e-25 MNVIPFLLFAFVASITPGPTNILVLANSQHFGVKNTVPAILGGCIAASAIVLISGAGAGE VLRQYPLIRQVMSWAGVLWLSWMSWQLFSAPAANLSSSRHVRFTARAAALLQVVNPKTWM MALAVVSLFAPASDHALRDIALMALWFLAISVVCLLCWAWLGKAVNRIFRTTVAMVRFQR VMALCLFISAWTGMLA >gi|333596726|gb|GL892086.1| GENE 2043 2175541 - 2176386 551 281 aa, chain - ## HITS:1 COG:PA2917 KEGG:ns NR:ns ## COG: PA2917 COG2207 # Protein_GI_number: 15598113 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 2 277 3 278 278 307 53.0 2e-83 MANDWLELRQHAETGIETIKAHFEGHAFDPHWHDSYLVGITLSGTQQFHCRRERHRSQPG DAFLLEPGEIHDGDAPVEGGFTYLTFYLDEHWLTHTLQGLYDATPGSYTLHFAQTLTREP QLVRSIGDTFASLHNDEMKIVQQSTMDNLLSQITAHCHWRKKLPSQLQSSAVAHRARDYL YAHIGENVGLSDLARETGTDRFTLTRCFKREFHLAPHAWLIQLRLAKARQMLACGELPVD VATAVGFADQSHLGRWFQRAYRISPAHYRRLCTNLPDVSRK >gi|333596726|gb|GL892086.1| GENE 2044 2176652 - 2177362 406 236 aa, chain + ## HITS:1 COG:ECs5103 KEGG:ns NR:ns ## COG: ECs5103 COG3647 # Protein_GI_number: 15834357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 37 236 10 209 209 322 81.0 3e-88 MAGFLLFCIRYALNFPSCQAIVIFSPDNENDMNLSALKVGSLLLLMILIYTGLFTSDRVT WLMEVTPVIIIIPLLLATHRRYPLTPLLYTLIFFHASILMTGGMYTYAKVPVGFEVQEML GLSRNPYDKLGHFFQGLVPALAAREILLRGGYVRGRKMTGFLVCCVALAISATYELIEWW AALAMGQGADDFLGTQGDPWDTQSDMFCALLGALTTVLLLGRFHQRQLRRLNVCQG >gi|333596726|gb|GL892086.1| GENE 2045 2181036 - 2181989 722 317 aa, chain + ## HITS:1 COG:YPO2901 KEGG:ns NR:ns ## COG: YPO2901 COG2215 # Protein_GI_number: 16123092 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 25 310 33 334 340 167 34.0 2e-41 MTTQRLQRDWRIPTAGLTVLVLLMAGFALHTHWNAFIQWCLATQITLHRYLVMYLLQLNN HQYSGGLWLLTGAFLYGVLHAVGPGHGKFIVATYLTTNKESQLAARVVPFIGSLMQGVSA IVFVFILAVGLNLASGDISTSRWYVEKISAVLIAAFGAFIIYQALSSLRPRKMAINAIKP LHQHNEQCGCGHHGVGVDLTRSDWKTRLGVVLAIGARPCSGAIMILMFSNALGIISWGIA AVMTMSLGTALSIMGLSLAVRYARERTVAWFGGGTYLNWVMPMVKIAGGVVLILFATVLF LTVIPVSAGGDYIAAGC >gi|333596726|gb|GL892086.1| GENE 2046 2182022 - 2183524 1932 500 aa, chain - ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 500 1 500 500 925 92.0 0 MLRRKKVKPITLRDVTIIDDAKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD PSLQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYA TIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGA GIVVLISTVVGEENFLDWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVDKLEQGDRE GLQDGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLI IIAIMVGMLFVQPIMGLLSDRFGRKPFIILGSVALFALAIPAFILINSNVLGLIFAGLLM LAVILNCFIGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAASLVESTQNLMMP AYYLMVIAVIGLITGITMKETANRPLKGATPAASDIQEAKEILREHYDNVEQKIEDIDAE IEALQKKRSRLVDQHPRINE >gi|333596726|gb|GL892086.1| GENE 2047 2184173 - 2185165 899 330 aa, chain + ## HITS:1 COG:no KEGG:ECL_00367 NR:ns ## KEGG: ECL_00367 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: E.cloacae # Pathway: not_defined # 1 330 1 330 330 489 96.0 1e-137 MKIKATIERIPGGMMLVPLVLGAILNTLAPNTGAYFGGFTKGMITGTVPILAVWFFCIGA SINLRATGTVLRKSGTLVITKIAVAWVVAMICAMFIPENGIQTGFFAGLSVLAIVSAMDM TNGGLYASLMNQYGTKEESGAFVLMSLESGPLMTMLILGSAGLASFEPHHFVGAILPFLI GFALGNLDHDLRDFFSKATPVLIPFFGFALGNTINLNVILETGLLGIVLGVAVIVITGIP LIIADRVIGGGNGTAGVAASSAAGAAVANPVIIAQINPAFEPVAASATALVAASVIVTAI LVPIITALYARRFGHVPESRTEPEAVEMHH >gi|333596726|gb|GL892086.1| GENE 2048 2185199 - 2186077 724 292 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0313 NR:ns ## KEGG: Ent638_0313 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 291 1 291 292 496 84.0 1e-139 MTTQLLDGPGRTLECIHPKFMVDLVQGADAARHSLLGPQQLQFRERLTQEIITQTRLRPW AMAGMLNENAALRLGLAEKLAGMLDPGHLALTRMTDKLVALRQQVNPRIPHPPGLLQQYE ALSVHFNQRAAYKEKALAQRGLTVQAGEHSEQIFTRWRAGQYDGWSLAGRCFIALEELRW GAFGDACRLANSDVAAMLKDNLRSMAANYLAQGINASPTTRHFYHQWLTTPSSPGLIDYK DMLGWLGDWCQADKHPVSWSVTQSWQTVALGMPRLCSAKRLVDGMVEEMFGA >gi|333596726|gb|GL892086.1| GENE 2049 2186074 - 2188428 1604 784 aa, chain - ## HITS:1 COG:yjdA_1 KEGG:ns NR:ns ## COG: yjdA_1 COG0699 # Protein_GI_number: 16131935 # Func_class: R General function prediction only # Function: Predicted GTPases (dynamin-related) # Organism: Escherichia coli K12 # 1 283 1 275 275 379 73.0 1e-105 MHTQTIFELSQEAERLLQLALNNLDSLKSMPIAKLDSTAAAMSGVNNNVLPLHFSARGVD AQQAMLNNELRKITRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHT PGQKEPVLHFLHVAPIDTLIAQLQKKLCEKDRGKLARRLEIDKDMTTLLERIERGEAFEK HHLGAEPIFHCLKSLNDLVRLSQALGVEFPFSEYAAIEHIPVIEVEFVHLAGLDAHLGQL TLLDTPGPNEAGQPHLQKMLSEQLARASAVLAVMDYTQLKSISDAEVRQAISAAGKSVPL YALVNKFDQKDRNSDDEEQVRAMISGTLMKGNISPGQIYPVSSMWAYLANRARYEMNVHG RLPDHQDQRWVQDFAEAALGRRWRTADLDDIDHIRHAADLLWEDSLFEQPIRKLIYAAYA NASLFALRSASHKLLNYAQNAREYLDFRHQGLTVAFDELELNIARLEEDMTMLRQRQSVV SDEVQHEVEEALNATDAFLLRQKGELHQALGDIFSRPFILDLAGREPSSLRTDDADAIQQ LVLDDEGQAQIVLSKIRSSCEQILLSAQSRIGRELALRFDQLESTLARSLNEAMRPIETR IKEQLSHAGLRARISFPAFQANQLNFNTRSLFNDAIVQDTPPASQPAGAGSVRDTVSRWL NNPGWGWEEYVVTRTRYVIDIAQLHGKFTQHTDQFCDQIRKALAAQVDVSVTAGMATFFA EFSLCLTGLQESLRDSLAVRQQNEHSTRALSQLLKQSMTTAAWIQEDTRLLRDDIQTLFA AEQP >gi|333596726|gb|GL892086.1| GENE 2050 2189019 - 2189354 489 111 aa, chain + ## HITS:1 COG:STM4289 KEGG:ns NR:ns ## COG: STM4289 COG2824 # Protein_GI_number: 16767539 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Salmonella typhimurium LT2 # 1 111 1 111 111 211 94.0 4e-55 MQLPHCPKCNSEYTYEDNGMFVCPECAHEWNDAEPAQDSDTLIVKDANGNLLADGDSVTV VKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN >gi|333596726|gb|GL892086.1| GENE 2051 2189435 - 2189866 450 143 aa, chain + ## HITS:1 COG:ECs5089 KEGG:ns NR:ns ## COG: ECs5089 COG2764 # Protein_GI_number: 15834343 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 142 1 142 147 227 76.0 5e-60 MPLSPYISFAGNCAQATAFYQQAVGAELLYKITFGEMPKDDNSEEGCPSGMNFPDSAIAH SNVRIAGSDIMMSDGLPPGSSAQYAGFTLVLDTQDVNEGKRWFDNLSDGGNIEMAWQETF WAHGFGKVTDKYGVPWMINVVKS >gi|333596726|gb|GL892086.1| GENE 2052 2190040 - 2190828 251 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 243 1 226 311 101 29 2e-19 MQTVIRVEKLSKTFHHNKALHAVDLTVQQGEMVALLGPSGSGKSTLLRHLSGLITCDKTP ESRVELLGNTVQHAGRLASDIRKSRAQTGYIFQQFNLVNRLTVLENVLIGALGSTPFWRT CLRWFSPSQKQEALQALTRVGMAHFAHQRVSTLSGGQQQRVAIARALMQKAKIILADEPI ASLDPESARIVMETLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFFDGASHQF DNERFDHLYRSVNRVEERAQAA >gi|333596726|gb|GL892086.1| GENE 2053 2190852 - 2191868 1406 338 aa, chain + ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 338 1 338 338 595 89.0 1e-170 MNYKAVAALAFTSMFSISTLLSPAHAEEQEKALNFGIISTESQQNLKPQWEPFLKDMETK LGIKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYW SVLIVNKDSPINNLNDMLSRRKELTFGNGDPNSTSGFLVPGYYVFAKNNASASDFKRTVN ASHETNALAVANKQVDVATNNTENLDKLKTSAPDKLKEIKVIWKSPLIPGDPIVWRKNLS ESTKDKVYDFFMNYGKTPEEKAVLTRLGWAPFRASSDLQLVPIRQLALFKQMQGVKDNKG LKEEEKTSKVSEIQAQLDDLDRLTAALGAMTSVNKAVQ >gi|333596726|gb|GL892086.1| GENE 2054 2192120 - 2192899 1088 259 aa, chain + ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 18 276 276 444 92.0 1e-125 MQTITLPPPKRSWFSLISWAILLAVLVISWKGAEMDPLLLVKDSGNMATFAADFFPPDFS QWPDYLSEMAITLQIAVWGTALAVVLSIPFGLMSAENIVPWWVYQPMRRLMDACRAINEM VFAMLFVVAVGLGPFAGVMALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKIEEIL YGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLI IITVSLLDFLSQRLRKHFI >gi|333596726|gb|GL892086.1| GENE 2055 2192920 - 2193645 709 241 aa, chain + ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 241 417 87.0 1e-116 MHLSRHPTSYPTRWQEIAAKLEVELRTHYRCGDYLPAEQQLADRYEVNRHTLRRAIDQLV ERGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASRHVADA LGIQEGDNVVHLRTLRRVNGVAVCQIDHYFADLTLWPVLQHFASGSLHDFLQDATGIALK RTQTRISARRAQAKESKVLEIPNMAPLLCVRTLNHRDGDVNATEYSVSLTRADMIEFTME H >gi|333596726|gb|GL892086.1| GENE 2056 2193646 - 2194098 473 150 aa, chain + ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 216 77.0 1e-56 MHFDTATRQRWMRVLAHSQPAALRERMNALGLTPDYDTIRAPEIGLVQIQARMGGTGERF FAGDATLTRAVIRLNSGTLGYGYVLGRDKAHAERCAAIDALLQEPPHFQTLMETLIAPLE ADRAARLAARQAEVNTSRVDFFTLVRGDNA >gi|333596726|gb|GL892086.1| GENE 2057 2194095 - 2194679 660 194 aa, chain + ## HITS:1 COG:phnH KEGG:ns NR:ns ## COG: phnH COG3625 # Protein_GI_number: 16131926 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli K12 # 1 194 1 194 194 305 84.0 3e-83 MTLQPAFTLAVQDAQQSFRRLLKAMSEPGVIVSLHQLSQGWLPLNLATTSVLLTLADNDT PVWLSDALLNDIASQNLRFHTNAPLVEQPQQAVFAVADEQISHEQLNALSEGSAVAPETS ATLILQVSSLSGGRMLRLTGAGIADERMVAPQLPECIIHELTERPHPFPLGIDLILTCGE RLLAIPRTTHVEVC >gi|333596726|gb|GL892086.1| GENE 2058 2194679 - 2195743 1290 354 aa, chain + ## HITS:1 COG:ECs5082 KEGG:ns NR:ns ## COG: ECs5082 COG3626 # Protein_GI_number: 15834336 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 613 89.0 1e-175 MYVAVKGGEKAIAAAHALQEHRRRGDDALPELSVAQIEQQLNLAVDRVMTEGGIADRELA ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPVNTAEMRLERRISAVYKDIPGGQLLGP TYDYTHRLLDFTLLANGEAPQLNTSDAEHDASPHVFSLLANQGLAKAEEDTGSTPDDITR TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAAEIRSGYIDVEIVPEELG FAVNVGELLMTECEMVNGFVAPENEDPHFTRGYGLVYGLSERKAMAMALVDRALQAPDYG EPVSGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQRERANG >gi|333596726|gb|GL892086.1| GENE 2059 2195736 - 2196581 1203 281 aa, chain + ## HITS:1 COG:ECs5081 KEGG:ns NR:ns ## COG: ECs5081 COG3627 # Protein_GI_number: 15834335 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 556 95.0 1e-158 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQITASVI GEADVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTEKTEDATLIQTRHRIPETPLTEDQI LIFQVPIPEPLRFIEPRETETRTMHALEEYGIMQVKLYEDIARFGHIATTYAYPVKVNGR YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPYTRVESLDFDDHPFTVQEWDEP CAICGSKHSYLDEVVLDDTGKRMFVCSDTDYCRQQSEANSQ >gi|333596726|gb|GL892086.1| GENE 2060 2196578 - 2197333 243 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 23 244 31 258 563 98 30 1e-18 MKPLLSVNNLTHLYAPGKGFSDVSFELWPGEVLGIVGESGSGKTTLLKSISARLTPQNGD ILYEGVSLYGMSEAERRRLLRTEWGVVHQHPMDGLRRHVSAGGNIGERLMATGARHYGNI RATAQHWLEEVEIPASRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQ ARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPY TQLLVSSVLQN >gi|333596726|gb|GL892086.1| GENE 2061 2197440 - 2198120 234 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 209 245 94 30 1e-17 MIHVENVSKTFVLHQQNGVRLSVLQNASLEVNQGECVVLHGHSGSGKSTLLRSLYANYLP DEGHIHIRHNNEWVDLVQAPARKVLEVRRTTIGWVSQFLRVIPRISALDVVMQPLLDLGV PRETCAAKAASLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL DSKNSAAVMDLIEQAKARGAAIVGIFHDETVRSRVADRLHPMGTHV >gi|333596726|gb|GL892086.1| GENE 2062 2198117 - 2199253 1171 378 aa, chain + ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 681 90.0 0 MIINNVRLVLENEVVGGSIEIQDGVIRAFAETQSRSPEAMDGEGGWLLPGLIELHTDNLD KFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAVEE TQKRGLNRAEHRLHLRCELPHHTTLPLFEKLVGREPVSLVSLMDHSPGQRQFANIEKYRE YYQGKYALNDAEMARYEEEQLQLAARWSQPNRLSIAAMCRDRNIALASHDDATHDHVRES HQLGSVIAEFPTTFEAAEASRQHGMNVLMGAPNIVRGGSHSGNVAASKLASLGLLDILSS DYYPASLLDAAFRVADDEGNRFTLPQAIRLVTKNPASALNLHDRGEIAEGKRADLVLAHR KGEHVHIDHVWRQGKRVF >gi|333596726|gb|GL892086.1| GENE 2063 2199253 - 2199801 498 182 aa, chain + ## HITS:1 COG:phnN KEGG:ns NR:ns ## COG: phnN COG3709 # Protein_GI_number: 16131920 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli K12 # 1 182 2 183 185 304 84.0 8e-83 MGRLIWLMGPSGSGKDSLLSALRQREHSQLLVAHRYITRDANAGSENHIALSEQEFFTRA GQNLLALSWHANGYYYGVGIEIDLWLHAGFDVLVNGSRAHLPQARARYEAALLPVCLQVS PDVLRSRLQTRGRENAREIDQRLERAARYTPSGCHVLNNDGSLLQSVETFLSLIRQKEKQ HA >gi|333596726|gb|GL892086.1| GENE 2064 2199794 - 2200228 457 144 aa, chain + ## HITS:1 COG:phnO KEGG:ns NR:ns ## COG: phnO COG0454 # Protein_GI_number: 16131919 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 144 1 144 144 226 78.0 1e-59 MPDCQLRPATADDAPIVYALICELKQAEFDHQAFHAGYLANLQDHNMRYQLAELDGQIIG MIGLHMQFHLHHARWIGEIQELVVMPQARGLKVGSQLLAWAEEIARQAGAELTELSTSVK RVDAHRFYVREGYTQSHFRFTKPL >gi|333596726|gb|GL892086.1| GENE 2065 2200238 - 2200996 766 252 aa, chain + ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 1 247 1 247 252 418 78.0 1e-117 MSLTITLTGTGGAQLVPVFGCDCAACRRARLQENYRRRPCSAAVKFNDAVTLLDAGIPHL MDDWPAGSFRQFLLTHYHMDHVQGLFPLRWGVGATIPVYGPPDDAGCDDLFKHPGLLDFS HTVEPFVMFELQGLRVTPLPLNHSKLTFGYLLESAHSRVAWLSDTAGLPDKTVTFLLNNQ PQAMIIDCSHEPRPETPRNHCDLNTVIALNKVIGCPQVILTHISHQFDAWMMDNPLPSGI EAGYDGMVLVLD >gi|333596726|gb|GL892086.1| GENE 2066 2201055 - 2201375 263 106 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0292 NR:ns ## KEGG: Ent638_0292 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 106 1 107 107 67 76.0 2e-10 MKRYSTALLLGLLTLTSQLAHADVIDDAIGNIQQAINDAYNPGSSRNDDDDDRYDRSRQT DSRQYDDRRRQLEDRRQRLDERQRQLDDDRRRLEEDERRLEDDYDR >gi|333596726|gb|GL892086.1| GENE 2067 2201445 - 2203724 2340 759 aa, chain - ## HITS:1 COG:Z5692_1 KEGG:ns NR:ns ## COG: Z5692_1 COG0642 # Protein_GI_number: 15804683 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 7 625 8 624 640 872 79.0 0 MSSRPPFFTSARGRLLIFNLLVVAVTLMVSGVAVLGFRHASQIQEQVQRQTLDDMTGSMN LARDTANVATAAVRLSQVVGALEYKGEAERLKQTQMALRHSLEQLADAPLAQLEPALVAR IIRRSNELQQSVTGMLERGQKRHLERNALLSALYQSQSYLRHLQDINRRYASNVPDARQL AEMDRLIVAAIDTPSPRATVQQLDAVTAGLPASALQPVVNQVLPDFNDELRKLAPLSKQL EESDLSISWYMFHIKALVAILNRDINQYVEQVAQASRLRTGQSHQELRSISVFISVFAVL ALIITGCACWYIYRNLGSNLTAISRAMSRLAHGEQDVSVPALQRRDELGELARAFNVFAR NTASLEHTTRLLKQKTTQMEIDRIERQGLEEALLHSQKMKAVGQLTGGLAHDFNNLLAVI IGSLELTDSSSPDAPRITRALKAAERGAMLTQRLLAFSRKQALHPHAVEMKPLLENLSEL MRHSLPATLTLDIEAQTPAWPAWIDVSQLENAIINLVMNARDAMEGQNGVIKIRTWNQRV TRSDGRRQDMVALEVIDHGCGMSQEVKSQVFEPFFTTKQTGSGSGLGLSMVYGFVRQSGG RVEIESAPGQGTTVRLQLPRSTLPAFSDDAVLATTAPAESELLVLVLEDEAGVRQTLCEQ LHQLGYLTLEAENGEQALNMLDASPDIGMFISDLMLPGGLSGAEVIDHVRSHYPQLPVLL ISGQDLRPAHNPQLPEVQLLRKPFTRAQLAQALRKVMVI >gi|333596726|gb|GL892086.1| GENE 2068 2203850 - 2205370 190 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 261 484 6 226 245 77 27 2e-12 MSRTPVLEMRHIAKTFGNFHALKGVDLTVFPGEIHALMGENGAGKSTLMKILAGAYTASS GEILIDGQPFHIKGPKDALAAGITLIYQEMQLAPNLTVAENIFLGSELSRGGLVQRKEMA AQAQAVIDRLGAQFSATDLVMKLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHR LFELILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDKLNASELVRMMVG RPLSDLFNKERDIPLGSPRLNVHHLTDGKKVQPCSLQVRSGEIVGLAGLVGAGRSELAQL IFGVRKATGGMIEVDGEPVVIHSPRAAIENGIGFLTENRKEQGLFLELAAQENITMATLE RDATFGWLNRKKAQSISDDAIALLNIRVPHSQVRAGGLSGGNQQKLLISRWVAIGPRILI LDEPTRGVDVGAKSEIYRIMNQMARKGVAILMISSELPEVVGMSDRVYVMREGSIAGELH GRDISQENIMTLATGVNDTHHQAVQS >gi|333596726|gb|GL892086.1| GENE 2069 2205367 - 2206362 1586 331 aa, chain + ## HITS:1 COG:YPO3963 KEGG:ns NR:ns ## COG: YPO3963 COG4158 # Protein_GI_number: 16124091 # Func_class: R General function prediction only # Function: Predicted ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 1 330 1 330 330 462 88.0 1e-130 MTTPTHPQQVAKSASAKKMLMSDLMQTIGILPILILIVAVFGFIAPNFFTESNLLNITRQ ASINIVLAAGMTFIILTGGIDLSVGSILGTTAVAAMVVSLIPEFAMLSIPAALMLGMVLG LFNGALVAFAGLPPFIVTLGTYTALRGAAYLLADGTTVINSNISFEWIGNNYLGPVPWLV VIALAVIVVCWFILRRTTLGVHIYAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGV MSASRLYSANGNLGTGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMG VSYFWQLVIKGAVIIIAVLIDKYRTRHHQSA >gi|333596726|gb|GL892086.1| GENE 2070 2206391 - 2207332 1327 313 aa, chain + ## HITS:1 COG:ECs5071 KEGG:ns NR:ns ## COG: ECs5071 COG1879 # Protein_GI_number: 15834325 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 498 97.0 1e-141 MRLKLLVTALCAGALLAATPFAQAKDLKSIGVTVGDLANPFFVQITKGAELEARKLAGDN VKVTLVSSGYDLGQQVSQIDNFIAAKVDMIILNAADSKGIGPAVKRAKEAGIVVVAVDVA AEGADATITSDNTQAGEMACKYITDRLKGKGNVVIINGPPVSAVQNRVEGCQTEFKRHPD IKVLSDNQNAKGSREGGLEVMTSLLAANPKIDGVFAINDPTAIGADLAAKQAQRNEFFIV GVDGSPDGEEALKRENSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPKEPVLIPVTMID KKNVGTYKGWTVK >gi|333596726|gb|GL892086.1| GENE 2071 2207447 - 2208133 815 228 aa, chain + ## HITS:1 COG:ECs5070 KEGG:ns NR:ns ## COG: ECs5070 COG3822 # Protein_GI_number: 15834324 # Func_class: R General function prediction only # Function: ABC-type sugar transport system, auxiliary component # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 404 81.0 1e-113 MKRSDINEILGHTRQFFSMHDVHLPPFASFPPTKWQQLDQAAWQEVFDLRLGWDVTAFSG NNFAAQGLTLFTLRNGSPNGVPYEKCYAEKIMHVRDGQVTPMHFHWRKREDIINRGGGNL IIELWNAGAHEETENTDVTVTVDGCRQTHAPGSQLRLTPGESICLTPGLYHSFWGERGFG DVLVGEVSSVNDDEHDNHFLQPIARYNDIEEDEPAVLVLCNEYTLFRI >gi|333596726|gb|GL892086.1| GENE 2072 2208144 - 2209004 1022 286 aa, chain + ## HITS:1 COG:ECs5069 KEGG:ns NR:ns ## COG: ECs5069 COG0191 # Protein_GI_number: 15834323 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 502 90.0 1e-142 MPLISLADGLAHAREHRYALGAFNVLDSHFLRALFAAAKQERSPFIINIAEVHFKYVSLE SLVEAVKFEAARHDIPVVLNLDHGLHFEAVVRALRLGFSSVMFDGSTLSYEENIRQTREV VKMCHAVGVSVEAELGAVGGDEGGALYGHADEAFFTDPQLAREFVDSTGIDALAVAIGNA HGKYKGEPKLDFPRLDAIRQQTGLPLVLHGGSGISDADFRRAIELGIHKINFYTGMSQAA LAAVEQRMANRQPLYDEFAELLLGIEEAITDTVAEQMRIFGSAGQA >gi|333596726|gb|GL892086.1| GENE 2073 2209004 - 2210023 1089 339 aa, chain + ## HITS:1 COG:ECs5068 KEGG:ns NR:ns ## COG: ECs5068 COG0524 # Protein_GI_number: 15834322 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 327 2 328 333 525 86.0 1e-149 MERKGIIAAGNMLVDHVHQIVQWPERGWLAEITHSERSTGGAPLNVLLTLAKMHVGLPLQ AVGLIGEDGDGDYILAMLDQYHVNRQRVQRTTFAPTSMSQVMTDPSGQRTFFHSPGANRL LDLPAFDRLDGSLKIFHLGYLLLLDSLDMPDEEFGTRSARLLAQMRDQGYETSLDLVSRK GDPRYQPLVLPALRHLDYLVINELEAGEFSGLEIRDDHDALNMAHIADAAAQLLAAGVRQ RVVIHCPEGAWGEAPGEEGQWVPSWRLEQNEIIGSVGAGDAFCAGFLYGCHESLPLTESI YLAHACARASLLAANAIDGAKTLAELQAFIQENGQAAFS >gi|333596726|gb|GL892086.1| GENE 2074 2210005 - 2210736 705 243 aa, chain - ## HITS:1 COG:ECs5067 KEGG:ns NR:ns ## COG: ECs5067 COG0745 # Protein_GI_number: 15834321 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 236 1 234 235 347 76.0 8e-96 MKPAILVVDDDVAVCELLQDVLSEHVFTVLTCHTGQDAVNRVQQDPGIALVLLDMMLPDI NGLQVLLQLQKQRPSLPVVMLTGLGSESDVVVGLEMGADDYIGKPFNPRVVVARVKAVLR RTGALDAEPAAPRVEGIAFNGWTLDTTRCELSDPQRNTVPLTQGEYGLLLALTQNARRVL SREQLLELTHSESAEVFDRTIDVLIMRLRRKIEVNPHQPLLIKTIRGLGYVFAADVSHHE KAA >gi|333596726|gb|GL892086.1| GENE 2075 2210993 - 2211412 551 139 aa, chain + ## HITS:1 COG:STM4285 KEGG:ns NR:ns ## COG: STM4285 COG0243 # Protein_GI_number: 16767535 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 139 1 139 715 282 94.0 1e-76 MKKVVTVCPYCASGCKIHLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP RLKIPMIRRERGGKLEAVSWNEALDYVATRLSAIKAKYGPDAIQTTGSSRGTGNETNYVM QKFARAVIGTNNVDCCARV >gi|333596726|gb|GL892086.1| GENE 2076 2211461 - 2213140 1929 559 aa, chain + ## HITS:1 COG:STM4285 KEGG:ns NR:ns ## COG: STM4285 COG0243 # Protein_GI_number: 16767535 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 559 157 715 715 1118 94.0 0 MSNAINEIDNTDLVFIFGYNPADSHPIVANHVIRAKQNGAKIIVCDPRKIETARIADMHI ALKNGSNIALLNAMGHVIIEENLYDQAFVASRTEGFEEYRKIVEGYTPESVEAITGVSAQ EIRQAARMYAGAKTAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKAHVGVNPVRGQN NVQGACDMGALPDTYPGYQYVKFPENREKFAKAWGVESLPEHTGYRISELPHRAAHGEVR AAYIMGEDPLQTDAELSAVRKGFEDLELVIVQDIFMTKTAAAADVILPSTSWGEHEGVYT AADRGFQRFFKAVEPKWDLKTDWQIISEISTRMGYPMHYNNTQEIWDELRHLCPDFYGAT YEKMGELGYIQWPCRDESEADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMV LSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAERLGIEDEALVWVNSRKGRII TRAQVSERPNKGAVYMTYQWWIGACNELVTENLSPITKTPEYKYCAVNVEPIADQHAAEQ YVIDEYNKLKARLRESAMG >gi|333596726|gb|GL892086.1| GENE 2077 2213814 - 2214488 638 224 aa, chain + ## HITS:1 COG:ECs5060 KEGG:ns NR:ns ## COG: ECs5060 COG0790 # Protein_GI_number: 15834314 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 222 1 227 229 271 64.0 1e-72 MKPIFLLLLFFTAFTHADEIGSQYKKQAEAGDARAQYYLADTYFSSGDRKQAALWAEKAA KGGDVDAMGLLSQILFTQGDYAQAKALAQQATIAGSKRGTIMLARILVNTEAGKTDYPQA ITLLQSATEDIDSDSAVDAQQLLGLIYANGVEVPQDDVQAAAWFKRSSALSRTGYAEYWA GMLFRQGEKGFITPNKQKALYWLNLSCTEGFDTGCEEFDALSGE >gi|333596726|gb|GL892086.1| GENE 2078 2214540 - 2215853 1973 437 aa, chain - ## HITS:1 COG:STM4283 KEGG:ns NR:ns ## COG: STM4283 COG1301 # Protein_GI_number: 16767533 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Salmonella typhimurium LT2 # 1 435 1 435 436 731 96.0 0 MKNLKVSLAWQILLALVLGIMLGSYLHYHSDSREWLIANLLSPAGDIFIHLIKMIVVPIV ISTLVVGIAGVGDAKQLGRIGVKTILYFEVITTVAIILGITLANVFQPGAGIDMSQLATV DISKYQSTTADVQSHAHGLMGTILSLVPTNIIASMAKGEMLPIIFFSVLFGLGLSSLPAT HREPLVTVFRSVSETMFKVTHMVMRYAPVGVFALIAVTVANFGFASLWPLAKLVILVHFA ILFFALVVLGIVARLCGLSIWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPASI TSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSLWQEIVLVLTLMVTSKGIAGVPGV SFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVISKWEHKFDRKKA LAYEREVLGRFDKTADQ >gi|333596726|gb|GL892086.1| GENE 2079 2216276 - 2218234 2492 652 aa, chain + ## HITS:1 COG:acs KEGG:ns NR:ns ## COG: acs COG0365 # Protein_GI_number: 16131895 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli K12 # 1 652 1 652 652 1278 93.0 0 MSQIHKHDIPANIADRCLISPEQYQEKYQQSISSPDAFWGEQGHILDWIKPYQKVKNTSF APGNVSIKWYEDGTLNLAANCLDRHLAERGNETAIIWEGDDASQSKHISYKELHRDVCRF ANVLLAQGIKKGDVVAIYMPMVPEAAVAMLACARIGAIHSVIFGGFSPEAVAGRIVDSNS KLVITADEGVRAGRGIPLKKNVDEALKNPNVTSINNVIVLKRTGGKIDWHEGRDLWWSDL IENASEQHQPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTA IRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVMDTWWQTETGG FMITPMPGATQLKAGSATRPFFGVQPALVDNEGNPQEGATEGNLVIVDSWPGQARTLFGD HERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHP KIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYTEVRNWVRKEIGPLATPDVLHWTD SLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVDKLLEEKQAIAMPS >gi|333596726|gb|GL892086.1| GENE 2080 2218517 - 2218735 308 72 aa, chain + ## HITS:1 COG:yjcH KEGG:ns NR:ns ## COG: yjcH COG3162 # Protein_GI_number: 16131894 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 72 33 104 104 118 81.0 2e-27 MLVIYVGFILLIAFAPQWLGTPLHAGTSVTRGIPIGIGVIVISFVLTGVYVWRANGEFDR LNKEVLREVKAS >gi|333596726|gb|GL892086.1| GENE 2081 2218732 - 2220381 2530 549 aa, chain + ## HITS:1 COG:ECs5049 KEGG:ns NR:ns ## COG: ECs5049 COG4147 # Protein_GI_number: 15834303 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 901 92.0 0 MKRVLTALAATLPFAAHAADALTGEVQRQPTNWQAIIMFLIFVVLTLYITYWASKRVRSR NDYYTAGGNITGFQNGLAIAGDFMSAASFLGISALVYTSGYDGLIYSLGFLVGWPIILFL IAERLRNLGRYTFADVASYRLKQGPIRMLSACGSLVVVALYLIAQMVGAGKLIELLFGLN YHVAVVLVGVLMVMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFTE AMSVHPKGEAIMSPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFY ATGFMGYFYILTFIIGFGAIMLVGANPAFKDAAGALIGGNNMAAVHLADAVGGNLFLGFI SAVAFATILAVVAGLTLAGASAVSHDLYANVFRKGASERDELKVSKITVLVLGVVAILLG ILFEKQNIAFMVGLAFSIAASCNFPIILLSMYWSKLTTRGAMIGGWLGLLTAVILMILGP TIWVQILGHESAIFPYEYPALFSIAVAFIGIWIFSATDNSPEGNLEREKFRAQFIRSQTG LGVEQGRAH >gi|333596726|gb|GL892086.1| GENE 2082 2220415 - 2221104 939 229 aa, chain - ## HITS:1 COG:STM4272 KEGG:ns NR:ns ## COG: STM4272 COG1346 # Protein_GI_number: 16767522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 350 92.0 9e-97 MTNFQISVLCLIATVVIYFANKRLYRRFRALPLMPLVFTPILLVLMLVFGHISWQNYIGE SHWLLWLLGPATIAFAVPVYDNLAIIKRHWMSLSAGVITATVVAVCSSVWLARLFTLSDE IQRSLAVRSVTTPFALAAAKPLGGQPDLVALFVVVTGVFGMAVGDVLFLRLSIREGMAKG AGFGAASHGAGTARSYELGQQEGVVASLVMMLSGVTMVLIAPLVAWVMF >gi|333596726|gb|GL892086.1| GENE 2083 2221097 - 2221507 637 136 aa, chain - ## HITS:1 COG:STM4271 KEGG:ns NR:ns ## COG: STM4271 COG1380 # Protein_GI_number: 16767521 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Salmonella typhimurium LT2 # 1 132 1 132 136 170 87.0 6e-43 MAVALSRVTPAVVQRLQVPIQVLLYAGLFVFAEYLVGWLHLPLPANLVGMVLMLSLILCR VIPLRWVRAGARWLLAEMLLFFVPAVVAVVNYAQLLMVDGWRIFAVIALSTLMVLGATAW VVDKVYRFEISRQKHD >gi|333596726|gb|GL892086.1| GENE 2084 2221610 - 2222497 1043 295 aa, chain + ## HITS:1 COG:STM4270 KEGG:ns NR:ns ## COG: STM4270 COG0583 # Protein_GI_number: 16767520 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 293 1 293 295 543 90.0 1e-154 MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLLTDT GRVVFERGLAILAEFRQLEAELGDINHLTKGLLRLGIPPMVGMMMAGPISLFRQRYPGVE LKISEFGGLTVQQAVMNGELDVAMTALPVEEESGLATLPLFSHPLCVLVPRSGDWLKTDS VKPELLGEHPLLIYNEDFALSRQLMALFNQHNVKPRIAVRSGQWDFLAAMVQAGVGIAIL PQPICERLDKNTLRWIPLESDLHWQLGMIWREGVYLSHSAQAWLQCCEGFWVRSE >gi|333596726|gb|GL892086.1| GENE 2085 2222580 - 2224199 2326 539 aa, chain - ## HITS:1 COG:STM4269 KEGG:ns NR:ns ## COG: STM4269 COG0025 # Protein_GI_number: 16767519 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Salmonella typhimurium LT2 # 1 539 10 548 548 921 93.0 0 MTLVVSLSGVVTRVLPFQVPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFAD GWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWAVPGIPLIPAFALAAVLSPTDAV ALSGIVGEGRIPKKIMGILQGEALMNDASGLVALKFAVAVAMGTMVFTIGGATLEFFKVA IGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVA AGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGIMESSLIAAEADP NVEVWMLFTDIVLIYMALMLVRFGWLWTMKKFSVRFLTKKPMEFGSWTTRELLIASFAGV RGAITLAGVLSIPLLLPTGDVFPARYELVFLAAGVILFSLFVGVIMLPILLQHIDAGDSS QQHKEERIARAATAEVAIVAIEKMEERLAADAEENIDNQLLKEVSSRVIGNLRRRADGRN DVESSLQEENLERRFRLAALRSERAELYHLRATRQISNETLQKLLHDLDLLEALLIENQ >gi|333596726|gb|GL892086.1| GENE 2086 2224379 - 2225728 1919 449 aa, chain - ## HITS:1 COG:STM4268 KEGG:ns NR:ns ## COG: STM4268 COG2252 # Protein_GI_number: 16767518 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 449 1 449 449 659 95.0 0 MSTPSARTGGSLDAMFKISARGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV FVATCLVAGVGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVL FTVISATGIRSWILRNLPQGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGNFA SFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGVSIVGLIFDPTVHFSGIFAMPSLSDDKG NSLIGSLDIVGALNPVILPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALT TDSLSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPAY ATAPALMYVGLLMLSNVAKIDFADFVDAMSGLITAVFIVLTCNIVTGIMIGFASLVIGRL VSGEWRKLNIGTVVIAVALVAFYAGGWAI >gi|333596726|gb|GL892086.1| GENE 2087 2226026 - 2226697 671 223 aa, chain - ## HITS:1 COG:STM4267 KEGG:ns NR:ns ## COG: STM4267 COG0625 # Protein_GI_number: 16767517 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 221 1 221 222 327 76.0 1e-89 MLTVHHLNQSRSHRVLWALEELGLTYEIVRYQREKTMLAPDALKKVHPLGKSPVLEDNGL VLAESGAILEYLQETYDPASQFKPLDPAHKVQYRFWLHYAEGSLMPLLLMKLVFNSLGKP PVPFGLRTLGKALGQGVQKAYLNRQLETHARFINDHLAENSWFAGDTLTMADIQMSFPLF ALLARGGVDNLDHIAAWKKRVEARPGWQTTLAKGGPLTIPGEG >gi|333596726|gb|GL892086.1| GENE 2088 2227054 - 2227512 538 152 aa, chain - ## HITS:1 COG:ECs5045 KEGG:ns NR:ns ## COG: ECs5045 COG0789 # Protein_GI_number: 15834299 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 1 152 154 285 94.0 3e-77 MEKRLPRIKALLTPGEVAKRSGVAVSALHFYESKGLIKSIRNAGNQRRYTRDVLRYVAII KIAQRIGIPLATIGDAFGVLPEGHSLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI GCGCLSRSDCPLRNPGDRLGEQGTGARLLEED >gi|333596726|gb|GL892086.1| GENE 2089 2227611 - 2227937 308 108 aa, chain + ## HITS:1 COG:STM4265 KEGG:ns NR:ns ## COG: STM4265 COG2207 # Protein_GI_number: 16767515 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 182 93.0 1e-46 MSHQQIIQTLIEWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVMHQTLGDYIRQRRLL LAAQALRSTQRPIFDIAMDLGYVSQQTFSRVFRREFDRTPSDYRHQLN >gi|333596726|gb|GL892086.1| GENE 2090 2227944 - 2229485 993 513 aa, chain - ## HITS:1 COG:STM4264 KEGG:ns NR:ns ## COG: STM4264 COG4943 # Protein_GI_number: 16767514 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Salmonella typhimurium LT2 # 5 510 13 518 533 801 73.0 0 MHNVVGIIMVVMLPVMLALWFAQIRAVSEISAQLRTFAELTLNKTERVIQQVDLAREEAE KYQGNVCTPTHRQYMLNVARGRLFVADLIYAEGQRFLCSTLFTPDHPYTIPAANYTRKPD VAIYYFRDTPFFNGYKMIYMQRGNYVVVVNPLSYSEVMSDDRSLSWGVYDTVSNAFFSVS QKANISLMHSMIRHQETTFQKGERFYTIVKSQQRPIAAIVSTSNARFYKTLYHQATLTLP LGMICSIIILLVWSRTHREFNSPGRLLHRALNKRQLCVHYQPIIDIKHNECVGAEALLRW PGFNGQVMSPAEFIPLAEKEGMIERITDYVVEEVFSDLGHFLAAHPHLYVSINLSASDFH SSRLIALISDKARYYSVRAQQIKIEVTERGFIDVPKTTPVIQAFRQAGYEVAIDDFGTGY SNLHNLYSLNVDILKIDKSFIDTLTTNSTSHLIAEHIIEMAQSLRLKTIAEGVETGEQVN WLLKRGVQYCQGWHFAKAMPPQAFMAWQQQPSR >gi|333596726|gb|GL892086.1| GENE 2091 2229848 - 2230108 56 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCELYHICCFIRQYHIEEKWAIYHPGEYIFVSRAGASAPRRRGHVRKEQVNTRPMQGTRR VSRFTGKWKRYLSGIAKNNVVASDYE >gi|333596726|gb|GL892086.1| GENE 2092 2230169 - 2230450 239 93 aa, chain + ## HITS:1 COG:no KEGG:ECL_00318 NR:ns ## KEGG: ECL_00318 # Name: not_defined # Def: putative inner membrane protein # Organism: E.cloacae # Pathway: not_defined # 1 93 1 93 93 142 97.0 5e-33 MATITTSMVLLRWPLLSAVLMFLASTLNIQFRKSDYAGLAVISTLLGLGAACWFATGLLG ITLVDMAAVWENIKVVMVEAMSHTPPDWPMVIT >gi|333596726|gb|GL892086.1| GENE 2093 2230512 - 2231042 640 176 aa, chain - ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 176 1 178 178 252 91.0 3e-67 MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVL FGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQEKYTTEVVVNVGGTMQMLGGRQGGG APAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAPSNEPPMDFDDDIPF >gi|333596726|gb|GL892086.1| GENE 2094 2231294 - 2234116 3822 940 aa, chain + ## HITS:1 COG:STM4254 KEGG:ns NR:ns ## COG: STM4254 COG0178 # Protein_GI_number: 16767504 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Salmonella typhimurium LT2 # 1 940 1 940 941 1849 96.0 0 MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLATRLAESFETALELSGGTAVVSDMDDA KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL SLAGGAIRGWDKRNFYYFQMLKSLAEHYKFDVEAPWASLSANVHKVILFGSGKENIEFKY MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCATCEGTRLRREARH VFVENTALPTISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLVHLRNLGNT VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLKDIMAVPESLTGQYMSGKRKIEV PKQRVAANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQT ALNGATLAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPLL >gi|333596726|gb|GL892086.1| GENE 2095 2234120 - 2234473 327 117 aa, chain - ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 115 1 115 118 191 86.0 2e-49 MTISEILQYCMSKPGAEQSVHSDWKATQIKVGDVLFAMVKEVEGRPAASLKTSPELADLL RQQHDDVRPSKHLNKAHWSTVFLDGSLPDSQIYYLVDASYQQAVELLPETIRQQLSV >gi|333596726|gb|GL892086.1| GENE 2096 2234476 - 2234892 323 138 aa, chain - ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 232 81.0 1e-61 MWYQQTLTLSAKPRGFHLVTDEVIGQIRDLSRVKTGLLHLLLQHTSASLTLNENCDPTVR SDMERHFLKTVPDNAPYEHDYEGEDDMPSHIKSSLLGVSLMLPVHNGRLLLGTWQGIWLG EHRIHGGSRKIIATLQGE >gi|333596726|gb|GL892086.1| GENE 2097 2235005 - 2235718 680 237 aa, chain - ## HITS:1 COG:aphA KEGG:ns NR:ns ## COG: aphA COG3700 # Protein_GI_number: 16131881 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Escherichia coli K12 # 1 237 1 237 237 400 82.0 1e-111 MRKITLALSAACLLFSLNSTVVARASAPTPLYTGTTAAILAEQAPIHWVSVAQIENSLTG RPPMAVGFDIDDTVLFSSPGFWRGKKTYSPDSEAYLKNPEFWEKMNNGWDEFSIPKEVAR ALIAMHVKRGDSIYFVTGRSQTKTETVSKTLQDDFLIPAASMNPVIFAGDHEGQNTKTQW LEKKNIKVFYGDSDNDITAAQDVGARGIRVLRASNSTYRPLPMAGKFGEEVIVNSEY >gi|333596726|gb|GL892086.1| GENE 2098 2235935 - 2237080 1447 381 aa, chain - ## HITS:1 COG:ECs5036 KEGG:ns NR:ns ## COG: ECs5036 COG1448 # Protein_GI_number: 15834290 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 381 17 397 397 680 87.0 0 MERFKEDPRSDKVNLSIGLYYNEEGIIPQLKAVAEAEARLNATPHGASLYLPMEGLNTYR NTIAPLLFGADHAVLAQKRVATIQTLGGSGALKVGADFLKKYFPDSGVWVSDPTWENHVA IFEGAGFRVETYPWFDSETNGVRVDALLEKLNTLPARSIVLLHPCCHNPTGADLTHAQWD AVIEVLKARNLIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERV GGLSVVCEDAEAAGRVLGQLKATVRRIYSSPPNFGAQVVATVLGDEQLKATWLAEVEGMR KRILSMRQALVNVLKEAVPGQNFDYLLKQRGMFSYTGLSAAQVDRLREEFGVYLIASGRM CVAGLNAGNVQRVAQAFAAVM >gi|333596726|gb|GL892086.1| GENE 2099 2237238 - 2238317 1155 359 aa, chain - ## HITS:1 COG:STM4247 KEGG:ns NR:ns ## COG: STM4247 COG0787 # Protein_GI_number: 16767497 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Salmonella typhimurium LT2 # 1 359 1 359 359 670 90.0 0 MQAATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPDADAFGVARL EEALRLRAGGITQPILLLEGFFEASDLPTIADQHLHTAVHNEEQLAALETAALSEPVTVW MKLDTGMHRLGVRPESAEAFYQRLCQCKNVRQPVNIVSHFARADEPDCGATERQLDIFNT FCEGKPGMRSIAASGGILLWPQSHFDWARPGIILYGVSPLENKPWGPDFGFKPVMSLVSK LIAVREHKAGEPVGYGGTWTSERDTRLGVVAMGYGDGYPRAAPTGTPVLVNGREVKIVGR VAMDMICVDLGPDAQDKAGDDAVMWGEGLPVERIAEITKVSAYELITRLTSRVAMKYVD >gi|333596726|gb|GL892086.1| GENE 2100 2238334 - 2239746 1592 470 aa, chain - ## HITS:1 COG:dnaB KEGG:ns NR:ns ## COG: dnaB COG0305 # Protein_GI_number: 16131878 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli K12 # 1 470 1 471 471 874 98.0 0 MAGNKPFNKQTEPRERDYQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVAEDFY TRPHRHIFTEMARLQESGSPIDLITLAESLERLGQLDSVGGFAYLAELSKNTPSAANISA YADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPKN IADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFA MNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTRIRTGQLDDEDWARISGTM GILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPSLSDNRTLEI AEISRSLKALAKELHVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRD EVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE >gi|333596726|gb|GL892086.1| GENE 2101 2239807 - 2240790 1136 327 aa, chain + ## HITS:1 COG:ECs5033 KEGG:ns NR:ns ## COG: ECs5033 COG0604 # Protein_GI_number: 15834287 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 580 90.0 1e-165 MATRIEFHKHGGPDVLKAVEFTPAAPGENEIQVENKAIGINYIDTYIRGGLYPPPSMPSG LGTEAAGIVSKVGSAVKHIKEGDRVVYAQSALGAYSSIHNVPAEKAALLPNAISFEQAAA SFLKGLTVFYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTTGSAQKAQR ALDAGAWQVINYREESIVERLKEITGGKKVRVVYDSVGKDTWESSLDCLQRRGLMVSFGN ASGAVTGVNLGILNQKGSLYVTRPSLQGYITNREELEEASNELFSLIASGVIKVDVAEAQ KYPLTDAQRAHEVLESRATQGSSLLIP >gi|333596726|gb|GL892086.1| GENE 2102 2240976 - 2241218 323 80 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4543 NR:ns ## KEGG: EC55989_4543 # Name: pspG # Def: phage shock protein G # Organism: E.coli_55989 # Pathway: not_defined # 1 80 71 150 150 112 80.0 6e-24 MLELLFVIGFFIMLMVTGVSLLGILAALVVATVVMFVGGLFALTIKLLPWLLLAIAVVWA IRAIKSPKLPTYQRNNRFRY >gi|333596726|gb|GL892086.1| GENE 2103 2241355 - 2242350 1216 331 aa, chain - ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 13 331 27 345 345 642 94.0 0 MLSEHQTAFPAHRFSIAPMLDWTDRHCRYFLRQLSRHTLLYTEMVTTGAIIHGKGDYLAY SEEEHPVALQLGGSDPAALAQCAKLAEERGYDEINLNVGCPSDRVQNGMFGACLMGNAHL VADCIKAMRDVVSVPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSG LSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGITSLDEAKAHLEHMDGVMVGREAYQN PGILATVDREIFGVEGADTDPVAVVRAMYPYIERELSNGTYLGHITRHMLGLFQGIPGAR QWRRYLSENAHKAGADIEVLEHALRLVADKR >gi|333596726|gb|GL892086.1| GENE 2104 2242498 - 2242761 116 87 aa, chain + ## HITS:1 COG:no KEGG:Glov_0060 NR:ns ## KEGG: Glov_0060 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 4 87 1 84 84 115 63.0 7e-25 MKTLNARHQKTLQLIFSVPTPSSLEWRRIEALFIALGAKASEGSGSRVRFEINGVVASFH RPHPDKEAKVYQVRDAMAFLIATGVSP >gi|333596726|gb|GL892086.1| GENE 2105 2242758 - 2243093 194 111 aa, chain + ## HITS:1 COG:SMa1990 KEGG:ns NR:ns ## COG: SMa1990 COG4226 # Protein_GI_number: 16263544 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Sinorhizobium meliloti # 2 109 1 108 118 132 58.0 2e-31 MINTMTYKGYAAKIDYSDEDLCFVGHVAGIRDVIGFHADNVAALRKAFEEAVDDYLAYCT EQGREPLRPASGKISLRIAPEIHSAINIAAEVSGKSVNQWISDTLSKAAHG >gi|333596726|gb|GL892086.1| GENE 2106 2243126 - 2244412 1403 428 aa, chain - ## HITS:1 COG:no KEGG:ECL_00306 NR:ns ## KEGG: ECL_00306 # Name: not_defined # Def: conjugative transfer protein # Organism: E.cloacae # Pathway: not_defined # 1 428 9 436 436 763 95.0 0 MVSIAVSFFMANQAGAANTWTEARSDAMGGTGVAAGSYGSGALINPALLAKSKPEDDVTV ILPSVGVQVTDEDNLQDEIDTINDKINHYKDVVDSLTPIEIITNPLGSINQFQGAAKDLA DELDYLKGKTAHATAGAGIAVSIPNDVLSVAFMAKGYAHGRVSSSIDQQDIDYLRGIQRN DAVAAGVALDAALNGTDQITKNLNSTASGRAAIVSDYGIAVARQFDLGGVPVSVGVTPKL QKTWLYNYTTSIYDYDSNKWNDSRYRTDDTGFNVDAGIAADFGENWTVGVSGQNLMSRDI DTKDIRIRNGRTGEVVSYKDTYQIRPLVTAGAAWHNDLVTLTADGDLTETKGFKSEDTSQ YVGVGAEVTPLSWLAVRAGYRADMKGNDSNVFTGGVGFAPFNSVHVDLMGLYGEDETWGA GAQLSMTF >gi|333596726|gb|GL892086.1| GENE 2107 2244605 - 2245093 388 162 aa, chain - ## HITS:1 COG:VCA0258 KEGG:ns NR:ns ## COG: VCA0258 COG3837 # Protein_GI_number: 15601026 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Vibrio cholerae # 1 161 1 162 170 159 50.0 1e-39 MKRPDCIRHWRDVEGADDATYPDSNERFSVGAPLARKLGLGRIGIHHERLPPGRRTSYPH AESDEEEFVYVLEGYPEAWINGYLWKLEPGDSVGFPAGTGVCHTFINNTDEEVRLLVVGE ANKKHNRIYYPLNPEYAATREDRWVDHPPQFFGPHDGKPGRK >gi|333596726|gb|GL892086.1| GENE 2108 2245211 - 2245723 535 170 aa, chain + ## HITS:1 COG:STM4241 KEGG:ns NR:ns ## COG: STM4241 COG0735 # Protein_GI_number: 16767491 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Salmonella typhimurium LT2 # 4 170 5 171 171 301 91.0 3e-82 MDKSTKELLAQAEKLCAQRNVRLTPQRLEVLRLMSLQQGAISAYDLLDLLRESEPQAKPP TVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGVVKEECAEGVEDIM HTLAARMGFALRHNVIEAHGLCSACVEVESCRHQDACQHDHSILVKKKPR >gi|333596726|gb|GL892086.1| GENE 2109 2245771 - 2245980 387 69 aa, chain - ## HITS:1 COG:STM4240 KEGG:ns NR:ns ## COG: STM4240 COG3237 # Protein_GI_number: 16767490 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 69 2 70 70 89 91.0 1e-18 MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAENEVKD WETRNDYRW >gi|333596726|gb|GL892086.1| GENE 2110 2246100 - 2247437 1151 445 aa, chain - ## HITS:1 COG:dinF KEGG:ns NR:ns ## COG: dinF COG0534 # Protein_GI_number: 16131870 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 441 19 459 459 593 84.0 1e-169 MALLTSADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPIYLGGVAIGATATSFLFM LLLFLRMSTTGLTAQAYGAKDPLRLARALVQPLILAFGAGALIVLLRTPLIDLALHIVGG SDAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNLLNIVLDLWLV MGLHMNVRGAALATAIAEYGTLLIGLWMVWRVLAMRGISLALLKTAWRGNIRKLLALNRD IMLRSLLLQLCFGALTVFGARLGPEIVAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYG ARESGQLREVWRAACRQAGLVALVFAFVYACFGEHIVALLTSIPALRELADRYLLWQVVL PVVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGFGLTLLTLPYLGNHGLWLALAVFLSLR GLSLAVIWHRHWRNNTWFPASHDIS >gi|333596726|gb|GL892086.1| GENE 2111 2247501 - 2248109 796 202 aa, chain - ## HITS:1 COG:STM4237 KEGG:ns NR:ns ## COG: STM4237 COG1974 # Protein_GI_number: 16767487 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 202 1 202 202 361 93.0 1e-100 MKALTTRQQEVFDLIRDHIGQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS GASRGIRLLVEEETGIPLVGRVAAGEPLLAQQHIEGHYQVDPGMFKPSADFLLRVSGMSM KDIGILDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNTVQLLPENNEFSPIVVD LREQSFSIEGLAVGVIRNGEWL >gi|333596726|gb|GL892086.1| GENE 2112 2248218 - 2248586 301 122 aa, chain - ## HITS:1 COG:STM4236 KEGG:ns NR:ns ## COG: STM4236 COG0818 # Protein_GI_number: 16767486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Salmonella typhimurium LT2 # 1 122 1 122 122 177 84.0 3e-45 MANNTTGLTRIIKAAGYSWKGFRAAWVNEAAFRQEAVAAIVAVVIACFLDVDAITRVLLI GSVLLVMIVEILNSAIEAVVDRIGSEFHELSGRAKDMGSAAVLLSIITAAITWVTLLWSH FR >gi|333596726|gb|GL892086.1| GENE 2113 2248741 - 2251161 2875 806 aa, chain + ## HITS:1 COG:STM4235 KEGG:ns NR:ns ## COG: STM4235 COG2937 # Protein_GI_number: 16767485 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 806 1 806 806 1512 92.0 0 MSGWPRIYYKLLNLPLSVLVKSKSIPAEPALELGLDTSRPIMYVLPYNSKADLLTLRAQC LAHDLPDPLEPLEVDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPDLDV QMVPVSVMFGRRPGREKGEENPPLRMLNGIQKFFAVSWLGRDSFVRFSPSVSLRRMADEH GTDKIIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASKAIARAVEDEARSKKIS HEKAQQNAIALMEEIAANFSYEMIRLSDRILGFTWNRLYQGINVHNAERVRQLAHDGHEI VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNK LYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLV PIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPLPLMTYLN HHVPEWRESIDPIEAVRPAWLTPTVNGIASELMVRINNAGAANAMNLCCTALLASRQRSL TREQLTEQIDCYLNIMRNVPYSVDSTVPSATASELIDHALQMNKFEVEKDTIGDIIILPR EQAVLMTYYRNNITHMLMLPSLMAAIITQHRRISRQELLRHIQAIYPMLKAELFLRWSED ELAAELDKMTAEMHRQGLITISDDDLHINPSRSRTLQLLASGARETLQRYAITFWLLSAN PSINRGTLEKESRTLAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDTGDAEPEET MKVYQMLAELITSDVRLTIESSTQGE >gi|333596726|gb|GL892086.1| GENE 2114 2251253 - 2252122 1190 289 aa, chain - ## HITS:1 COG:ECs5023 KEGG:ns NR:ns ## COG: ECs5023 COG0382 # Protein_GI_number: 15834277 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Escherichia coli O157:H7 # 1 288 1 288 290 471 92.0 1e-133 MEWSLTQNKLLAYHRLMRTDKPIGALLLLWPTLWALWVATPGVPPLWILAVFVAGVWLMR AAGCVVNDYADRKFDGHVKRTANRPLPSGQVTGKEARILFVVLVLLSFLLVLTLNTMTIL LSVAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWA VAYDTQYAMVDRDDDLKIGIKSTAILFGRHDKLIIGILQVAVLALMVAIGRLNGLNWAFY WSVLVAGLLFAYQQKLIAKREREACFKAFLNNNYVGLVLFLGLAMSYWS >gi|333596726|gb|GL892086.1| GENE 2115 2252135 - 2252632 464 165 aa, chain - ## HITS:1 COG:ubiC KEGG:ns NR:ns ## COG: ubiC COG3161 # Protein_GI_number: 16131865 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Escherichia coli K12 # 1 165 38 202 202 275 87.0 4e-74 MSHPALTQLRALRYFDQIPALNPEQLDWLLLEDSMTKRFEQQGKTVTVTMIQEGFVSPAE IASELPLLPQEERYWLREILLCADGEPWLAGRTVVPESTLSGPELALQRLGKTPLGRYLF TSSELTRDFIEIGCDADLWGRRSRLRLSGKPLILTELFLPASPLY >gi|333596726|gb|GL892086.1| GENE 2116 2252805 - 2253743 916 312 aa, chain - ## HITS:1 COG:no KEGG:ECL_00294 NR:ns ## KEGG: ECL_00294 # Name: not_defined # Def: maltose regulon periplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 312 1 314 314 478 93.0 1e-133 MKMKKSLVALCLSAGLLACAPAVTFADVNFVPQNTSAAPAIPAAALQQLVWTPVDQSKTQ TTQLSAGGQSLNVPGVSGPVAAFSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTP SAFFPSDYFSYQEPGVMSADRLEGVMRLTPALGQQKIYVLVFTTEKDLQQTTKLVDPAKA YAKGTGNSVPDIPDPLARHTTDGLIKLKVSTNSASSVLVGPLFGSSGPGPVTVGNTAAPV YAAPAAAPAAAPAPTKKAEPVLNDTETYFNNAIKQAVKNGDVDKALKLLDEAERLGSTTA RSTFISSVKGKG >gi|333596726|gb|GL892086.1| GENE 2117 2253858 - 2255165 1566 435 aa, chain - ## HITS:1 COG:lamB KEGG:ns NR:ns ## COG: lamB COG4580 # Protein_GI_number: 16131862 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 435 2 446 446 657 76.0 0 MITLRKVPLAVAIAAGILSAQAGAVDFKGYARSGIGWTGSGGEQQCFQATGAQSKYRLGN ECETYAELKLGQEVWKEGDKSFYFDTNVAYSVSQQNDWESTSPAFREANVQGKNLIEWLP GSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGIENIDLGFGKLSLAATRSSESGGSATFA DRDANGDRIYDNVVPNDVFDVRLAGLETNPGGTLELGVDYGHTNIPDDYYLQPGASKDGW LFTAEHTQSMMKGFNKFVLQYGTDSMTSNGKGIPQGGSIDNDGSMWRVLDHGAITLADRW DLMYVGMYQNIDRDNNNGTEWWTVGVRPMFKWTPIMSTLLEVGYDNVKSQKTDDKNSQYK ITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYANNDSGAGYTSGVAYSDTSAKTFSRG DNDEWTFGAQMEIWW >gi|333596726|gb|GL892086.1| GENE 2118 2255211 - 2256320 1331 369 aa, chain - ## HITS:1 COG:STM4230 KEGG:ns NR:ns ## COG: STM4230 COG3839 # Protein_GI_number: 16767480 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 369 1 369 369 706 96.0 0 MASVQLRNVTKAWGDVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL FIGDTRMNDIPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKETINQRVTQVAEV LQLAHLLERKPKALSGGQRQRVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLH KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN FLPVKVTATAIEQVQVELPNRQQVWLPVDSANVQVGANMSLGIRPEHLLPSHIADVTLEG EVQVVEQLGHETQIHIQIPAIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTAC RRLHKEPGV >gi|333596726|gb|GL892086.1| GENE 2119 2256691 - 2257881 1575 396 aa, chain + ## HITS:1 COG:STM4229 KEGG:ns NR:ns ## COG: STM4229 COG2182 # Protein_GI_number: 16767479 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Salmonella typhimurium LT2 # 1 396 4 399 399 726 93.0 0 MNIKTGARVFALSALAAMMVSAPALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK VTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEVTPDKAFQDKLFPFTW DAVRYNGKLIAYPIAVEALSLIYNKDLVPNPPKTWEEIPALDKELKAKGKSALMFNLQEP YFTWPLIAADGGYAFKFENGKYDVKDVGVDNAGAKKGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWTNIDKSKINYGVTLLPTFNGKPSKPFVGVLSAGINAASPNKE LAKEFLENYLLTDQGLDEVNKDKPLGAVALKSFQDQLAKDPRIAATMDNAQKGEIMPNIP QMAAFWYATRTAVINAASGRQTVDAALKDAQGRITK >gi|333596726|gb|GL892086.1| GENE 2120 2258002 - 2259546 2172 514 aa, chain + ## HITS:1 COG:malF KEGG:ns NR:ns ## COG: malF COG1175 # Protein_GI_number: 16131859 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 514 1 514 514 909 91.0 0 MDVIKKKHWWQSDALKWSVIGLLCLLVGYLVVLMYVQGEYLFAIMTLILSSAGLYIFANR KAYAWRYVYPGVAGMGLFVLFPLICTIAIAFTNYSSTNQLAQERATQVLLDRSYQAGKTF NFGLYPAGDEWKLALTDGESGKNYLSDAFKFGGEQKLVLKEAAALPEGERANLRIITQNR QALTQLTAVLPDDSKVTMSSLRQFSGTQPLYTLADDGTLTNNQSGVKYRPNNDIGFYQSI TADGSWGDDKLSPGYTVTIGWDNFTRVFTDEGIQKPFFAIFVWTVVFSVLTVILTVAVGM VLACLVQWESLKGKAIYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGIKPA WFSDPTTARSMIIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTYRIAFEGGG GQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD >gi|333596726|gb|GL892086.1| GENE 2121 2259561 - 2260451 1369 296 aa, chain + ## HITS:1 COG:STM4227 KEGG:ns NR:ns ## COG: STM4227 COG3833 # Protein_GI_number: 16767477 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Salmonella typhimurium LT2 # 1 296 1 296 296 511 95.0 1e-145 MAMVQPKSQKLRLLATHLGLLIFIAAIMFPLLMVIAISLRSGNFATGSLIPDEISWEHWK LALGFSVEHADGRVTPPPFPVLLWLWNSVKVATITAIGIVTLSTTCAYAFARMRFPGKAT LLKGMLIFQMFPAVLSLVALYALFDRLGQYVPFIGLNTHGGVIFAYLGGIALHVWTIKGY FETIDGSLEEAASLDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITVVFLLAQRWLVNGLTAGGVKG >gi|333596726|gb|GL892086.1| GENE 2122 2260548 - 2260958 613 136 aa, chain - ## HITS:1 COG:yjbA KEGG:ns NR:ns ## COG: yjbA COG3223 # Protein_GI_number: 16131856 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 136 1 136 136 194 97.0 3e-50 MTSLTRPRVEFISTILQTVLNLGLLSLGLILVVFLGKETVHLADVLFAPEQTSKYALVEG LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL LVITLWLCNSKRLKRE >gi|333596726|gb|GL892086.1| GENE 2123 2261138 - 2263234 2906 698 aa, chain - ## HITS:1 COG:no KEGG:ECL_00281 NR:ns ## KEGG: ECL_00281 # Name: not_defined # Def: putative lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 698 1 698 698 1394 96.0 0 MKKNYLYSMLALCVSAACHAETYPAPIGPSQSDFGGVGLLQTPTARMAREGEISLNYRDN DQYRYYSASVQLFPWLETTLRYTDVRTKQYSSVDAFSGDQTYKDKAFDVKLRLWEESYWM PQVSVGAKDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGYLGTSGNVKNPFCSYSDKYCY RDNSYQKAGSINGDQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYSEDFAGKIEQKSK FNVGAIYRVTDWADVNLSYERGNTLMFGFTLRTNFNDMRPHYNDNPRPKYQPEPQDAIIQ HSVVANQLTLLKYNAGLADPKIQTKGDTLYVTGEQVKYRDSREGIERANRIVMNDLPEGI RTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETELLQKRVEPVVPESTEQGWYIDK SRFDFHIDPVLNQSVGGPENFYMYQLGAMATADLWVTDHLLTTGSLFGNIANNYDKFNYT NPPNDSKLPRVRTRVREYVQNDIYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEV LYRPVDSNWAFGIDANYVKQRDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV GQYLAGDKGGTLDISKHFDSGVVVGGYATITNVSPDEYGEGDFTKGVYVSIPLDLFSSGP TRSRAAVGWTPLTRDGGQQLGRKFQLYDMTSDKNINFR >gi|333596726|gb|GL892086.1| GENE 2124 2263234 - 2263971 724 245 aa, chain - ## HITS:1 COG:no KEGG:ECL_00280 NR:ns ## KEGG: ECL_00280 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 245 1 245 245 429 86.0 1e-119 MKMLIHVALLASLASPLAWSAGTVQVYTPDSEKPKTLTNAGHLLDLVGQPRLAKSWWTGA VISERQATVVAEQKHQALLARLSGLAQQEDADDAAGINSLRQQLQAVKVTGRQKVNLDPD EVRVAENGNPSLEGDYTLWLPAQPSTVTVMGLLSSPGKKPFTPGRDVASYLDEQSLLSGA DNSYAWVVYPDGHTQKAPVAYWNKRHIEPMPGSIIFVGFADHFWTKAYDGLNADILRSLI QRIPE >gi|333596726|gb|GL892086.1| GENE 2125 2263968 - 2264606 661 212 aa, chain - ## HITS:1 COG:no KEGG:ECL_00279 NR:ns ## KEGG: ECL_00279 # Name: not_defined # Def: putative lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 212 1 212 212 401 94.0 1e-111 MKRPAIILICLLLQACSATTKGLGHSLWDSLFGTPGVQLTDDELQNMPYASQYMQLNDGP QLFVVLAFDENGQQKWVTQDQATIVTQHSRIVKTLLGGDNLLEVNNLAEDPLIKPNQIVD GASWTRTMGWTEHKQVRYATARSTFRWDGSDSVKVGSDETQVRVLDEKVTTDQATWHNRF WVDEEGQIRQSLQYLGAGFFPVKTTLIKAAKS >gi|333596726|gb|GL892086.1| GENE 2126 2264670 - 2264912 138 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKVLYGIFAISALAATSVYAAPVQVGEAAGSAATSASAGSSTAASTSAVSSAVGVALAA TGGGDGSNTGTTTTTTTSTQ >gi|333596726|gb|GL892086.1| GENE 2127 2265279 - 2266928 2428 549 aa, chain - ## HITS:1 COG:STM4221 KEGG:ns NR:ns ## COG: STM4221 COG0166 # Protein_GI_number: 16767471 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 549 1 549 549 1089 96.0 0 MKNINPTQTAAWQALQKHFDEIKDVTIADLFAKDADRFSKFSATFDDLMLVDFSKNRITE ETLAKLQELAKETELADAIKSMFSGEKINRTEDRAVLHVALRNRSNTPIIVDGKDVMPEV NAVLEKMKTFSEAIISGQWKGYTGKAITDVVNIGIGGSDLGPFMVTEALRPYKNHLNMHF VSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKTAGDEKHVAKHF AALSTNGKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIILSVGFDNFVELLSGAHAM DKHFSTTAPEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKY VDRNGNAVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHPKL LSNFFAQTEALAFGKSREVVEQEYRDQGKDPATLDHVVPFKVFEGNRPTNSILLREITPF SLGALIALYEHKIFTQGAILNIFTFDQWGVELGKQLANRILPELGDDKAIDSHDSSTNGL INRYKAWRA >gi|333596726|gb|GL892086.1| GENE 2128 2267303 - 2268652 1882 449 aa, chain + ## HITS:1 COG:ECs5007 KEGG:ns NR:ns ## COG: ECs5007 COG0527 # Protein_GI_number: 15834261 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 702 87.0 0 MTSFVVAKFGGTSVADYDAMNRSADVVLADPNTRLVVLSASAGVTNLLVSLSEGLEATER FVKLDALRKIQFDILERLQNPNVIREEVERLLENITTLAEAASLATSSALTDELVSHGEL MSTLLFVEIMRERNIQAQWFDVRKVMRTSDRFGRAEPDVEALAELTNQQLAPRLDEGIVI TQGFIGSEAKGRTTTLGRGGSDYTAALLGEALHATRVDIWTDVPGIYTTDPRVVSAAKRI DVIAFEEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPKAGGTLVCKKTENPPLFR ALALRRKQTLVTLHSHNMLHSRGFLAEVFGILARHNISVDLITTSEVSIALTLDTTGSTS TGDTLLTQSLLIELSELCRVEVEEDLALVAIIGNKLSRACGVGKEVFGVLDPFNIRMICY GASSYNLCFLVPADQAEQVVQKLHQNLFE >gi|333596726|gb|GL892086.1| GENE 2129 2268746 - 2269690 1382 314 aa, chain + ## HITS:1 COG:STM4195 KEGG:ns NR:ns ## COG: STM4195 COG0385 # Protein_GI_number: 16767445 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Salmonella typhimurium LT2 # 1 302 1 302 313 442 92.0 1e-124 MLSAITRLFPLWALLLSVLAYYTPSTFTGIGPWVTTLLMLIMFGMGVHLKIDDFKRVLSR PAPVAAGIFLHYLVMPLAAWLLAMAFKMPPDLSAGMVLVGSVASGTASNVMIYLAKGDVA LSVTISSVSTLVGVIATPLLTRLYVDAHIQVDVIGMLLSILQIVVIPIALGLVIHHLFPR VVKAVEPYLPAFSMVCILAIISAVVAGSASHIASVGFVVIVAIVLHNTIGLLGGYWGGKL FGFDESTCRTLAIEVGMQNSGLAAALGKIYFSPLAALPGALFSVWHNLSGSLLAGYWSGK PIDGQPKKDAVKQG >gi|333596726|gb|GL892086.1| GENE 2130 2269741 - 2270013 314 90 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4556 NR:ns ## KEGG: ECUMN_4556 # Name: yjbD # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 90 1 90 90 97 82.0 1e-19 MATPRLTQKDMTEAEQRELKTLLDRARIAHGRTLTNAETNQVKKEYIDKLMAQREAAAKK ARKLKKEQAYKPDAEATFSWSASTSNRGRR >gi|333596726|gb|GL892086.1| GENE 2131 2270014 - 2270886 1113 290 aa, chain - ## HITS:1 COG:ECs5005 KEGG:ns NR:ns ## COG: ECs5005 COG1187 # Protein_GI_number: 15834259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 468 90.0 1e-132 MLPTQSTRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVVPGDVVKVNGQVIE PRDAEDLVFIALNKPVGIVSTTEDGERDNIVDFVNHSSRIFPIGRLDKDSQGLIFLTNHG DLVNKILRAGNDHEKEYIVTVNKPVTDEFIRGMGAGVPILGTVTKKCKVRKEAPFAFRIT LVQGLNRQIRRMCEYFGYEVTKLERTRIMNVSLSGIPLGEWRDLTDDELIELFKLIENSS SEAKPKAKAKPKTQAIKRPVVKAPQTEEKGRGKPGNGKRFTQPGRKKKGR >gi|333596726|gb|GL892086.1| GENE 2132 2270940 - 2271278 332 112 aa, chain - ## HITS:1 COG:STM3907 KEGG:ns NR:ns ## COG: STM3907 COG5606 # Protein_GI_number: 16767183 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Salmonella typhimurium LT2 # 6 112 6 112 113 118 54.0 2e-27 MGIHVDTKIRHVTAAETNIFAELGFEEKEAKQLQENAEKEVEQLLAIKRQLMQEISTWIT ENKLRQVDVAARLNVSRPRVSDVVNLKTNKFTLDTLVMMLCKLGKPVSVTVG >gi|333596726|gb|GL892086.1| GENE 2133 2271774 - 2273405 2101 543 aa, chain - ## HITS:1 COG:STM4189 KEGG:ns NR:ns ## COG: STM4189 COG1283 # Protein_GI_number: 16767439 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Salmonella typhimurium LT2 # 1 543 1 543 543 873 90.0 0 MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSGSVEKKPLAFCAGIGVTALVQS SNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFL GRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDIMLDALIGAV FAIVSYSSLAAVLLTATLTAAGVISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVAL GSLLFKLVGSLIILPFVHPLANLMDNLSLPKAELVIYFHVFYNLVRCLAMVPFAAPMARF CERLIRDEPELDARLKPKHLDTAVLDTPALAIANAARETLRMGDAMETMLEGLQKVMHGE PREEKELRRLADDINVLYTAIKLYLARIPQDELAEEESRRWAEIIEMSLNLEQASDIVER MGSEIADKSLAARRAFSVEGLKELEALHEQLVSNLKLAMSVFFSSDVPSARRLRRNKHRF RILNRRYSHAHVERLHQQNVQSIETSSLHLGLLGDMKRLNSLFCAVAYSVMEQPDEDDER DEY >gi|333596726|gb|GL892086.1| GENE 2134 2273623 - 2277240 4649 1205 aa, chain - ## HITS:1 COG:STM4188_2 KEGG:ns NR:ns ## COG: STM4188_2 COG1410 # Protein_GI_number: 16767438 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Salmonella typhimurium LT2 # 305 1205 1 901 901 1751 94.0 0 MGTMIQGYRLSEDDFRGERFADWPCDLKGNNDLLVLSKPSVIRDIHNAYFEAGADIVETN TFNSTTIAMADYQMESLSAEINFEAARLARACADEWTARTPDKPRYVAGVLGPTNRTASI SPDVNDPAFRNITFDQLVAAYRESTKALVEGGSDLILIETVFDTLNAKAAIYAVKEEFEA LGIDLPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALSFGLNCALGPDELRQYVQELS RIAECYVTAHPNAGLPNAFGEYDLDADTMAAQIREWAESGFLNIVGGCCGTTPEHIAAMS RAVAGLPPRKLPELPVACRLSGLEPLTIGDDSLFVNVGERTNVTGSAKFKRLIKEEKYSE ALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIE KGLKCIQGKGIVNSISMKEGVDTFIHHAKRVRRYGAAVVVMAFDEVGQADTRERKIEICR RAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGV SNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILN RRDDATERMLDLAEKYRGSKSDESANVQQAEWRAWDVKKRLEYSLVKGITEFIEQDTEEA RQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEK GSSNGRMVIATVKGDVHDIGKNIVGVVLQCNNYEIIDLGVMVPADKILKTAREVNADLIG LSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASR TVGVVSALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVSLQAARDNDLAFDWSSYT PPVAHRLGVQDVTASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGEEAKRLFKDAND MLDRLSAEKALNPRGVVGLFPANRVGDDVEIYRDETRTHVLAVSHHLRQQTEKVGFANYC LADFVAPKLSGKADYIGAFAVTGGLEEDALADAFDAQHDDYNKIMVKAIADRLAEAFAEY LHERVRKVHWGYAANENLSNEELIRENYQGIRPAPGYPACPEHTEKGTIWKLLDVEAHTG MKLTESFAMWPGASVSGWYFSHPDSKYFAVAQLQRDQIEDYALRKGMSVSEVERWLAPNL GYDAD >gi|333596726|gb|GL892086.1| GENE 2135 2277500 - 2278327 991 275 aa, chain + ## HITS:1 COG:STM4187 KEGG:ns NR:ns ## COG: STM4187 COG1414 # Protein_GI_number: 16767437 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 275 1 274 274 480 92.0 1e-135 MVTTVPAKRGRKPAANPAAQPGGQVQSLTRGLKLLEWIAESHGSVALTELAQQAGLPNST THRLLTTMQQLGFVRQVGELGHWAVGAHAFIVGSSFLQSRNLLAIVHPILRKLMEESGET VNLAVLDQSDHQAIIIDQVQCTQLMRMSAPIGGKLPMHASGAGKAFLSQLSEEQVTGLLH RKGLHAYTHATLVSPVHLKEDLALTRKRGYSFDDEEHALGLRCLASCIFDEHREPFAAIS ISGPISRMTDDRVTELGALVIKAAKEVTLAYGGIR >gi|333596726|gb|GL892086.1| GENE 2136 2278350 - 2280101 1539 583 aa, chain - ## HITS:1 COG:STM4185 KEGG:ns NR:ns ## COG: STM4185 COG4579 # Protein_GI_number: 16767435 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Salmonella typhimurium LT2 # 1 573 1 573 583 1069 89.0 0 MSRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEHADWHAVQLAMKQRIHLYDHHVGL VVEQLRCITEGKSPDAEFLLRVKKHYTHLLPDYPRFEIAESFFNSVYCRLFDHRSLSPER LFIFSSQPERRFRTIPRPLAKDFFPDRGWEKLLHRVLTDLPLRLPWENKARDIGYIHAHL NEAFGAEVLSQSHLQVANELFYRNKAAWLAGKLVTPSAIVPFLLPIHRTDDGELFVDTCL TTSAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE YLRYVTTADEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLV KEHDRVGRMADTQEFENFVLDKQQIDPALMALLMQEASAKITDLGDKIVISHLYIERRMV PLNIWLEQSEGQALRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRDIPPPRYPEDELSSEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLF RASYWRGLQTRIKNGHVEDVYAYRRKQRFCIRFSPSPCGRGPG >gi|333596726|gb|GL892086.1| GENE 2137 2280279 - 2281583 1617 434 aa, chain - ## HITS:1 COG:STM4184 KEGG:ns NR:ns ## COG: STM4184 COG2224 # Protein_GI_number: 16767434 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 835 95.0 0 MKTRTQQIEELQKEWTQPRWEGIRRPYSAEEVVKLRGSVNPECTLAQNGAAKMWKLLHGG AKKGYINSLGALTGGQALQQAKAGIEAIYLSGWQVAADANLASSMYPDQSLYPANSVPSV VDRINNTFRRADQIQWAAGIEPHDPRFIDYFLPIVADAEAGFGGVLNAFELMKSMIEAGA AAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLVIARTDADAADL ITSDCDPYDSEFITGERTSEGFYRTHAGIEQAISRGLAYASYADLVWCETSTPDLALAKR FADAIHAKYPGKLLAYNCSPSFNWQKNLDDTTIASFQQQLSDMGYKYQFITLAGIHSMWF NMFDLAHAYAQGEGMKHYVEKVQQPEFAAGKEGYTFVSHQQEVGTGYFDNVTTIIQGGTS SVTALTGSTEEAQF >gi|333596726|gb|GL892086.1| GENE 2138 2281615 - 2283216 1927 533 aa, chain - ## HITS:1 COG:STM4183 KEGG:ns NR:ns ## COG: STM4183 COG2225 # Protein_GI_number: 16767433 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Salmonella typhimurium LT2 # 1 533 1 533 533 1021 91.0 0 MTQQATTVDELTFTQPNGEQEQHVLTAEAVEFLTELVTRFTPQRNKLLAARIHQQQEIDN GKLPGFISETASIRHGEWKIRGIPDDLQDRRVEITGPVERKMVINAMNANVKVFMADFED SLAPDWRKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWR GEAIPGSLFDFALYFFHNHKNLLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFSLPR GTIKATLLIETLPAVFQMHEILHALRDHIVGLNCGRWDYIFSYIKTLKNHADRVLPDRQV VTMDKPFLSAYSRLLIKTCHKRGAFAMGGMAAFIPSKDVERNNQVLNKVKADKELEARNG HDGTWIAHPGLADTAMEVFNRVLGDNKNQLFVTREEDAPIAEEQLLAPCAGERTEEGMRA NIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFR QMLAEEMRVIQDELGEHRFSSGRFDDAARLMEQITISDDLIDFLTLPGYRFLA >gi|333596726|gb|GL892086.1| GENE 2139 2283487 - 2284416 995 309 aa, chain - ## HITS:1 COG:STM4182 KEGG:ns NR:ns ## COG: STM4182 COG1897 # Protein_GI_number: 16767432 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 608 95.0 1e-174 MPIRVQDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSN SPLQVDIQLLRIDARESRNTPAEHLNNFYCNFDDIRDENFDGLIVTGAPLGLVEFNDVAY WPQIKQVLEWAKDHVTSTLFVCWAVQAALNILYGIPKQTRSDKLSGVYEHHILHPHALLT RGFDDTFLAPHSRYADFPAQLIRDYTDLEILAETEDGDAYLFASKDKRIAFVTGHPEYDP HTLASEYFRDVEAGLNPDVPYNYFPKNDPQNTPRATWRSHGNLLFTNWLNYYVYQITPYD LRHMNPTLE >gi|333596726|gb|GL892086.1| GENE 2140 2288109 - 2289698 1848 529 aa, chain + ## HITS:1 COG:STM4176 KEGG:ns NR:ns ## COG: STM4176 COG0138 # Protein_GI_number: 16767430 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Salmonella typhimurium LT2 # 1 529 1 529 529 1000 95.0 0 MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGF PEMMDGRVKTLHPKVHGGILGRRGQDDGIMEQHNIAPIDMVVVNLYPFAQTVAREGCSLE DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYHAIINEMDANEGSLTLATRFDLAIKAF EHTAAYDSMIANYFGSLVPAYHGESKDPSGRFPRTLNLNFIKKQDMRYGENSHQQAAFYI EEEVKEASVATAQQVQGKALSYNNIADTDAALECVKEFSDPACVIVKHANPCGVAVSTSI LDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQ NVRVLVCGQWAERVPGLDFKRVNGGLLVQDRDLGMVTEADLRVVTKRQPTEQELRDALFC WKVAKFVKSNAIVYAKENMTIGIGAGQMSRVYSAKIAGIKAGDEGLEVKGSAMASDAFFP FRDGIDAAAAVGITCVIQPGGSIRDDEVIAAADEHGIAMIFTDMRHFRH >gi|333596726|gb|GL892086.1| GENE 2141 2289714 - 2291006 1776 430 aa, chain + ## HITS:1 COG:STM4175 KEGG:ns NR:ns ## COG: STM4175 COG0151 # Protein_GI_number: 16767429 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Salmonella typhimurium LT2 # 1 428 1 428 429 787 93.0 0 MKVLVIGNGGREHALAWKAAQSPQVETVFVAPGNAGTALEPALQNVAIGVTDIPALLNFA RNENIDLTIVGPEAPLVIGVVDAFRAAGLKIFGPTEGAAQLEGSKAFTKDFLARHNIPTA EYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVQDMLAGNAFGDA GHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGNADTGPNTGGMGAYSPAPVVT DEVHQRTMDRIIWPTVKGMAAEGNTYTGFLYAGLMIDRQGNPKVIEFNCRFGDPETQPIM LRMKSDLVDLCLAACEGKLDEKTSEWDERASLGVVIAAGGYPGNYNTGDEIHGLPLEEVD GAKVFHAGTKLSGDDRVLTNGGRVLCATALGQTVAEAQKRAYALMADIHWKGSFSRQDIG YRAIAREQGE >gi|333596726|gb|GL892086.1| GENE 2142 2291074 - 2291772 399 232 aa, chain - ## HITS:1 COG:no KEGG:ECL_00262 NR:ns ## KEGG: ECL_00262 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 232 1 232 232 403 93.0 1e-111 MAVNSFNEGAATPLLSFWRGTLALAGILLLSACSHDSSLPPFTASGYADDQGAVRIWRKD SSDEVHLLSAFSPWHNGNTSTAEYRWQGDALSLIELNIYSKTPEHVKVRFDDHGELSFMQ HEVSGQKQQLSSDQVALYRYRAEQLRQTSDALRQGRVVLRQGRWHADGTVTTCEGQTVKP DLESWATEHIQRRQRHSSMEVSVAWLEAPEGSQLLLVANEDFCTWQPTEKSF >gi|333596726|gb|GL892086.1| GENE 2143 2291778 - 2292050 382 90 aa, chain - ## HITS:1 COG:YPO3731 KEGG:ns NR:ns ## COG: YPO3731 COG0776 # Protein_GI_number: 16123868 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 91 140 97.0 5e-34 MNKTQLIDVIADKADLSKVQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG RNPQTGKEIKIAAANVPAFVSGKALKDAVK >gi|333596726|gb|GL892086.1| GENE 2144 2292237 - 2292827 842 196 aa, chain - ## HITS:1 COG:yjaG KEGG:ns NR:ns ## COG: yjaG COG3068 # Protein_GI_number: 16131829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 196 1 196 196 361 92.0 1e-100 MLQNPIHLRLEKLESWQHVTFMACLCERMYPNYAAFCKQTAFGEGQIYRRILDLIWETLT VKDAKVNFDSQLEKLEEAIPAADDFDLYGVYPAIDACVALSELIHSRLSGETLEHAIEVS KASITTVAMLEMTQEGREMTDEELRANPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA DLREAGESNIGIIFNQ >gi|333596726|gb|GL892086.1| GENE 2145 2292869 - 2293540 654 223 aa, chain - ## HITS:1 COG:STM4168 KEGG:ns NR:ns ## COG: STM4168 COG1515 # Protein_GI_number: 16767422 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Salmonella typhimurium LT2 # 1 222 1 222 223 420 94.0 1e-117 MDLASLRAQQIELASSVIREDRLDTDPPRYIGGADVGFEQGGEVTRAAMVVLKYPSLELV EYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLLFVDGHGISHPRRLGVASHFG LLVDVPTIGVAKKRLCGAFEPLSAEPGALAPLIHKGEQLAWVWRSKARCNPLFIATGHRV SMDSALAWVQRCMKGYRLPEPTRWADAVASSRPAFIRWQEIQP >gi|333596726|gb|GL892086.1| GENE 2146 2293550 - 2294614 1416 354 aa, chain - ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 701 94.0 0 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADVDKLPIPDPEGE LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPLALHA LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENEG RRVPVTLFTKGGGQWLEAMAATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLYAQ PARIEEEVSTILSGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSAQYHK >gi|333596726|gb|GL892086.1| GENE 2147 2294653 - 2295426 842 257 aa, chain - ## HITS:1 COG:yjaD KEGG:ns NR:ns ## COG: yjaD COG2816 # Protein_GI_number: 16131826 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Escherichia coli K12 # 1 257 1 257 257 488 90.0 1e-138 MDRIIEKSDLGWWIVSHEQKLWLPGGEIPYGAAEIFDLVGQPALRIGEWQGDPVWLIQQA RRQDMGSVRQVLDRDVGLFQLAGRGVQLAEFYRSHKYCGYCGHTMHPSKTEWAMLCGHCR ERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGIHTVLAGFVEVGETLEQAVAREVMEESG IKVKNLRYVTSQPWPFPMSLMTAFMAEYDSGEIVIDQKELLEANWYRYDDLPLLPPPGTV ARRLIEDTVAMCRAEYE >gi|333596726|gb|GL892086.1| GENE 2148 2295522 - 2296019 599 165 aa, chain + ## HITS:1 COG:ECs4918 KEGG:ns NR:ns ## COG: ECs4918 COG3160 # Protein_GI_number: 15834172 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Escherichia coli O157:H7 # 1 150 1 150 158 239 80.0 2e-63 MLNQLESLTERVGGSNTLVDRWLHVRKHLLVAYYNLVGLKPGKESFMRLNEKALDDFCQS LVDYLSDGHFNIYERIIREMEGTTPYLAASKLCPLLEANTQQIMDYYDSTLENAIDHDNY LEFQQALSDLGEALEERFTLEDKLIALVLDNNLNISISDNVARPA >gi|333596726|gb|GL892086.1| GENE 2149 2296263 - 2298158 2347 631 aa, chain + ## HITS:1 COG:STM4164 KEGG:ns NR:ns ## COG: STM4164 COG0422 # Protein_GI_number: 16767418 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Salmonella typhimurium LT2 # 1 631 1 631 631 1259 95.0 0 MSTTKLTRREQRAQAQHFIDTLEGTAFPNSTRIYISGSQADIRVPMREIKLSPTLIGGSK DNPQHEDNEAVPVYDTSGPYGDPSVAINVQQGLAKLRQPWIDARNDCEELSVRSSAYTNE RLADDGLDELRFTGLLTPKRARAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRSEV LRYQHPGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA KWCLSHHQENFLYEHFREICEICAAYDVSLSLGDGLRPGSIRDANDEAQFAELHTLGELT KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY AAAQTIEVGMADMSETFRAKGGEIYLKKEEA >gi|333596726|gb|GL892086.1| GENE 2150 2298158 - 2298799 746 213 aa, chain + ## HITS:1 COG:ECs4916 KEGG:ns NR:ns ## COG: ECs4916 COG0352 # Protein_GI_number: 15834170 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 366 90.0 1e-101 MYQPDFPPVPFRLGLYPVVDSVEWIARLLEAGVRTLQLRIKDKRDEEVEADVVAAIALGR RYDARLFINDYWRLAVKHQAYGVHLGQEDLETTDLNAIRDAGLRLGVSTHDDMEIDVALA ARPSYIALGHVFPTQTKQMPSAPQGLTQLASHVKRLADYPTVAIGGISLERAPAVLETGV GSIAVVSAITQAADWQAATAQLLQLAGAGDERS >gi|333596726|gb|GL892086.1| GENE 2151 2298786 - 2299541 895 251 aa, chain + ## HITS:1 COG:STM4162 KEGG:ns NR:ns ## COG: STM4162 COG0476 # Protein_GI_number: 16767416 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Salmonella typhimurium LT2 # 1 251 1 251 252 387 76.0 1e-107 MKDRDFMRYSRQILLEDIAIDGQQKLLASRVLIVGLGGLGTPAALYLAGAGVGTLVLADD DEVHLSNLQRQILFTTEDINQPKAHVTRQRLNQLNPDIELVALQTRLSGDDLQREVALAD VVLDCTDNMATRQAINAACVTQNTPLITASAVGFGGQMMVLTPPWAQGCYRCLWPDEAEP ERNCRTAGILGPVVGVMGTLQALEAIKLLSGMETERNTLRLFDARSSGWRHLALNRASHC PVCGGRDAHSV >gi|333596726|gb|GL892086.1| GENE 2152 2299525 - 2299725 259 66 aa, chain + ## HITS:1 COG:STM4161 KEGG:ns NR:ns ## COG: STM4161 COG2104 # Protein_GI_number: 16767415 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Salmonella typhimurium LT2 # 1 66 1 66 66 81 72.0 4e-16 MRILFNDEPMTCDDDLTVAALLDTLRQLKPGTALALNQQILPREQWEYQQVSEGDQILLF QVIAGG >gi|333596726|gb|GL892086.1| GENE 2153 2299727 - 2300494 831 255 aa, chain + ## HITS:1 COG:thiG KEGG:ns NR:ns ## COG: thiG COG2022 # Protein_GI_number: 16131821 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Escherichia coli K12 # 1 254 26 279 281 433 92.0 1e-121 MLRIADKTFESHLFTGTGKFASPQLMVDAIRESGSQLVTLAMKRVDLRQHNDAILAPLLE AGVTLLPNTSGAKTAEEAIFAAQLAREALGTRWLKLEIHPDARWLLPDPIETLKAAEKLV QQGFTVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIFEQATVPVVV DAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVMMARAFRLAVESGLLARQSGPGSRSV QAQATSPLTGFLEAL >gi|333596726|gb|GL892086.1| GENE 2154 2300494 - 2301627 1280 377 aa, chain + ## HITS:1 COG:STM4159 KEGG:ns NR:ns ## COG: STM4159 COG1060 # Protein_GI_number: 16767413 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Salmonella typhimurium LT2 # 1 375 1 375 377 691 86.0 0 MATFTDRWRQLNWDDIALRINSKTAADVERALSARQLTREDLMALLSPAASTYLEPMAQR AQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEHEIARECAAIREM GFEHLLLVTGEHQSKVGMDYFRQHLPAIRREFASLQMEVQPLSQEEYAELKTLGLDGVMV YQETYHEATYARHHLKGKKQDFIFRLETPDRLGRAGIDKIGLGALIGLSDSWRVDCYMVA EHLLWLQQHYWQSRYSISFPRLRPCAGGIEPASLMDERQLVQTLCAFRLFAPEVELSLST RESPAFRDRAIPLAINNVSAFSKTQPGGYADDHPELEQFAPHDGRRPEAVAEALAAQGLQ PVWKDWDSWLGRASHLG >gi|333596726|gb|GL892086.1| GENE 2155 2301961 - 2303502 1266 513 aa, chain + ## HITS:1 COG:aq_265_2 KEGG:ns NR:ns ## COG: aq_265_2 COG2199 # Protein_GI_number: 15605806 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 359 508 10 167 168 113 44.0 9e-25 MALHSKKLSFTRPIMVSFAGILFSFALIAILVILSQRKDFLEDYHKINGNFTHNLAVNYT ETILRENDYILGRAAMYFARNDRVNQTINIDPTHGLQMLMHLQNLMPTVSSISLADTEGR HLRAPEVLPTEKGKSFDARTRPWFIGQAEASNFPHYTRPYLDYFTQHPTVTLYKPVISPE GRLKGTLAFHLDLTSMGYTLRQMVAPVQGEFFIVERDGAVVLHPDTGALFKQYVSEALMD KMTSGEGHLFDPKSKTWYYYYSFTNPDWFVIYRVSDATLTVITRHETTVVGWGFALAAII IILFGLYLRHASRSVLMNIINAIKTGDVNQAPRLEAMLSHTIRTNKERELAYVRQATHDA LTGCKNRRAFDNDVGELLAAHQPFVLALIDIDNFKSINDTWGHLSGDIVLRNVAREGIQI MQPHHVSVYRYGGEEFAVIFPAELMNSANALLEAWRTTVEKRTWREENLRVTFSAGLGEW HFEPLEQFIGSVDEALYTAKQQGKNRIVSTASR >gi|333596726|gb|GL892086.1| GENE 2156 2303683 - 2303991 334 102 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 94 52.0 5e-20 MKNIVLCCAAGMSTSMLVQRMIDAAQKKGVEVTIKAVPVAEFKDNIATADIVLLGPQVKY EQAKLQAQADPLGKKVAVIDMMDYGMMKGDAVLEKALKLLES >gi|333596726|gb|GL892086.1| GENE 2157 2303991 - 2304308 364 105 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 4 101 17 114 115 88 50.0 3e-18 MEDLETTIMELLVNAGAARSAALTALQMARKGDFDEAEKAMEESREYVKHAHTIQTQLIG LDEGTGKLPVNLITVHSQDHLMNAMVIQDLAGDMIELYRRIPLVN >gi|333596726|gb|GL892086.1| GENE 2158 2304367 - 2308590 4513 1407 aa, chain - ## HITS:1 COG:STM4154 KEGG:ns NR:ns ## COG: STM4154 COG0086 # Protein_GI_number: 16767408 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Salmonella typhimurium LT2 # 1 1407 1 1407 1407 2756 98.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM GAEAIQALLKSMDLEQECETLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG LASLHARVKVRITEYEKDENGEFVAHTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIENAGSSDFLEGEQVEYSRVKIANRDLEANGKIGATFARDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA APQVTAEDASASLAELLNAGLGGSDNE >gi|333596726|gb|GL892086.1| GENE 2159 2308667 - 2312695 4075 1342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1574 58 0.0 MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|333596726|gb|GL892086.1| GENE 2160 2313015 - 2313380 558 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762301|ref|NP_457918.1| 50S ribosomal protein L7/L12 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 121 1 121 121 219 98 4e-55 MSITKDQIIEAVAAMSVMDVVELVSAMEEKFGVSAAAAVAVAAGPAEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEV K >gi|333596726|gb|GL892086.1| GENE 2161 2313447 - 2313944 794 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762302|ref|NP_457919.1| 50S ribosomal protein L10 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 165 1 165 165 310 99 2e-82 MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLL RRVVEGTQFECLKDTFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPA SQIDRLATLPTYEEAIARLMATMKEAAAGKLVRTLAAVRDAKEAA >gi|333596726|gb|GL892086.1| GENE 2162 2314234 - 2314938 1138 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206575922|ref|YP_002241079.1| ribosomal protein L1 [Klebsiella pneumoniae 342] # 1 234 1 234 234 442 98 1e-122 MAKLTKRMSVIRDKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFAQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF DADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSAAAN >gi|333596726|gb|GL892086.1| GENE 2163 2314942 - 2315370 702 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228577459|ref|YP_002845810.1| 50S ribosomal protein L11 [Citrobacter sp. 30_2] # 1 142 1 142 142 275 99 8e-72 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTESMEKGLPIPVVIT VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGS DIEAMTRSIEGTARSMGLVVED >gi|333596726|gb|GL892086.1| GENE 2164 2315527 - 2316072 572 181 aa, chain - ## HITS:1 COG:STM4148 KEGG:ns NR:ns ## COG: STM4148 COG0250 # Protein_GI_number: 16767402 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 345 99.0 2e-95 MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFAQVEK A >gi|333596726|gb|GL892086.1| GENE 2165 2316074 - 2316457 417 127 aa, chain - ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 189 98.0 2e-48 MSANTEAQGSGRGLEAMKWVVVAVLLIVAIVGNYLYRDMMLPLRALAVVILIAAAGGVAL LTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|333596726|gb|GL892086.1| GENE 2166 2318322 - 2319278 1234 318 aa, chain + ## HITS:1 COG:STM4139 KEGG:ns NR:ns ## COG: STM4139 COG1072 # Protein_GI_number: 16767398 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Salmonella typhimurium LT2 # 3 318 1 316 316 587 91.0 1e-167 MLMSKKEQTLMTPYLQFNRSQWAALRDSVPMTLTEGEIARLKGINEDLSLEEVAEIYLPL SRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEH RSVELITTDGFLHPNEVLKERGLMKKKGFPLSYDMHRLVKFVSDLKSGVPHVTAPVYSHL IYDRIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQR WYINRFLKFREGAFTDPDSYFHNYAQLSEEEAINVATGLWNEINYVNLKENILPTRERAS LILTKSEKHAVDQIRLRK >gi|333596726|gb|GL892086.1| GENE 2167 2319320 - 2320333 802 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 328 2 329 329 313 47 2e-83 MSTHQATTQQPLLQAIDLKKHYPVKKGIFAPERLVKALDGVSFSLERGKTLAVVGESGCG KSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQ ILEEPLLINSSLSKEQRREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDP DVVIADEPVSALDVSVRAQVLNLMMDLQQDLGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGTKDQIFTNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCR RRFGPCTQLQPQLKDYGGQLVACFAVDQDENGEKPHA >gi|333596726|gb|GL892086.1| GENE 2168 2320330 - 2321313 1109 327 aa, chain - ## HITS:1 COG:STM3627 KEGG:ns NR:ns ## COG: STM3627 COG0444 # Protein_GI_number: 16766914 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 1 327 1 327 327 619 95.0 1e-177 MALLNVDKLSVHFGDVGTEFRAVDRISYSVNQGEVVGIVGESGSGKSVSSLAIMGLIDYP GRVMAENLEFNGQDLKRISEKQRRQLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ GGNKKTRRQRAIDLLTQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGSSHD IFRAPRHPYTQALLRALPEFAQDKARLASLPGVVPGKYDRPQGCLLNPRCPYATDKCRAE EPELNQLADGRQSKCHYPLDDAGRPTL >gi|333596726|gb|GL892086.1| GENE 2169 2321324 - 2322226 1339 300 aa, chain - ## HITS:1 COG:STM3628 KEGG:ns NR:ns ## COG: STM3628 COG1173 # Protein_GI_number: 16766915 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 300 1 300 300 469 92.0 1e-132 MSQVTQNKVVTAPVPMTPMQEFWHYFKRNKGAVVGLVYVSIMILIAVFANVLAPYNPADQ FRDALLAPPAWQDGGSLTHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGIVLG LVAGYFGGIVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLT RAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFL GMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ >gi|333596726|gb|GL892086.1| GENE 2170 2322236 - 2323255 343 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 66 333 43 310 320 136 28 3e-30 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK PMWQQYLHYIWGVLHGDLGISLKSRLPVWDEFVPRFKATLELGICAMIFATAVGIPVGVL AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVQWNLTPVSGRVSDMVFLDDTNP LTGFMLIDTAIWGEEGNFIDAVAHMILPAMVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA RAKGLTRMRVIIIHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK >gi|333596726|gb|GL892086.1| GENE 2171 2323433 - 2325040 2192 535 aa, chain - ## HITS:1 COG:STM3630 KEGG:ns NR:ns ## COG: STM3630 COG0747 # Protein_GI_number: 16766917 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 535 1 535 535 1038 94.0 0 MSISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPI YNRLVEFKTGTTEVIPGLAEKWDVSEDGKTYTFHLRQGVKWQDSKEFKPTRDFNADDVVF SFDRQKNAQNPYHKVSGGSYEYFEGMGLPDLIAEVKKVDDKTVQFVLTRPEAPFLADLAM DFASILSKEYADNMLKAGTPEKVDLNPIGTGPFQLLQYQKDSRILYKAFPGYWGTKPQID RLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKNINLLEQAGLNVGYLSFNTE KKPFDDVKVRQALTYAVNKEAIIKAVYQGAGVAAKNLIPPTMWGYNDDIKDYTYDPEKAK ALLKEAGQDKGFTVELWAMPVQRPYNPNARRMAEMVQADWAKIGVQAKIVTYEWGEYLKR AKAGEHQAVMMGWTGDNGDPDNFFATLFSCAAAKDGSNYSRWCYKPFEDLIQPARATDDH NKRIELYKQAQVVMHDQAPALIVAHSTVYEPVRKEVKGYVVDPLGKHHFENVSVE >gi|333596726|gb|GL892086.1| GENE 2172 2325757 - 2325999 173 80 aa, chain - ## HITS:1 COG:no KEGG:ESA_04231 NR:ns ## KEGG: ESA_04231 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 80 1 80 80 156 100.0 2e-37 MICYLLGKPERKEWELFPDINHRVIKLSQIEKVTFDRRKEMMVSKRLKAKDYRTVSTGFN VLSSKPGLITLAIAHSYAVT >gi|333596726|gb|GL892086.1| GENE 2173 2326186 - 2326551 67 121 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3929 NR:ns ## KEGG: EC55989_3929 # Name: not_defined # Def: Tn7-like transposase TnsA # Organism: E.coli_55989 # Pathway: not_defined # 1 121 160 280 280 251 100.0 6e-66 MFWQLIDVEFQIYVGSELNNVVGKNICWATSVLRDGSEFYDKYPLDKILWKLKPDVYPIV GLRAMISSIFGVDAQEAMMLLQAMIGLKMINVDLSYPILETGLIKIISNDHYIGLNANGY Y >gi|333596726|gb|GL892086.1| GENE 2174 2327681 - 2328661 -82 326 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3928 NR:ns ## KEGG: EC55989_3928 # Name: not_defined # Def: Tn7-like transposition protein TnsB # Organism: E.coli_55989 # Pathway: not_defined # 1 326 382 707 707 665 100.0 0 MCDNGEMIGLKPQEEMTPLTKLEFAPVGRGDRKSIVERCFGILNDEVIHRLIGTTRRGKI VKGEPTPQSRACLTIQEVTSLLIREILAHNQRTYEELAYINPLLIENDLVISPKNSWMIS LKHGRFSARAVGADEVIARLLIPVNANITAGGIQYNNLFYECDPEIASGVRVFGRTTCEA RIDDNCVDYIYVRFDKNSIFKKHYLLKKRDVFKGKAHLDTDVMADWVDTQKEINLFTLDS LSNINNKDEFNRKGNERLNEIYESRRVHGKDIKKNRKNELDSLGRTHVANGRSEPLLPSS SNVLLLPGREEKQRWLKGKKKTEDAE >gi|333596726|gb|GL892086.1| GENE 2175 2329435 - 2330109 41 224 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3927 NR:ns ## KEGG: EC55989_3927 # Name: not_defined # Def: Tn7-like transposition protein TnsC # Organism: E.coli_55989 # Pathway: not_defined # 1 224 259 482 482 463 100.0 1e-129 MGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYDSQDWQSFIHYLWPLQWTNV ETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITGAVLSASVPVLVSHTEE YKDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEV LRNFDEKILSLDHDLVINRTAEKKNTYDALQRCGLINIDPLNKL >gi|333596726|gb|GL892086.1| GENE 2176 2331215 - 2331706 -59 163 aa, chain + ## HITS:1 COG:no KEGG:ECL_04905 NR:ns ## KEGG: ECL_04905 # Name: not_defined # Def: Tn7-like transposition protein TnsD # Organism: E.cloacae # Pathway: not_defined # 1 163 356 518 518 325 100.0 3e-88 MAVRGFSLASIAEKNSLSEGAVSSVISSCYGLCSWRKKCKKDSLRRRHKQKILRFIHNQS VSITRKLVKESCYASFYWLNKHECDWLNSCLPKTIRCYKNKRVDWSERDIISSSLINDVL SQGQYSMSLTSLDALLGGHGWLLKYRDKLPMTMILLRKMELIK >gi|333596726|gb|GL892086.1| GENE 2177 2332336 - 2332644 73 102 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3923 NR:ns ## KEGG: EC55989_3923 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 102 207 308 308 189 100.0 3e-47 MLIYFLFDLFKCKSHSSLSKVIEVKIMHDRYISAVFKMLSEVNFCNFNSFISDIFEDVSY ASIGLDDYSVNVHFLRLRAADCKFCQLNGKYFCSLYNVKLLR >gi|333596726|gb|GL892086.1| GENE 2178 2333860 - 2335686 1000 608 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3921 NR:ns ## KEGG: EC55989_3921 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 608 21 628 628 1220 100.0 0 MRLRKLKLKNFRGYRNSTEIIIDESMTGIVGRNDFGKSTLLEALAIFFETEGMKADKNDM NCFSLREGDGRFEIACEFDDLPDFIMIDDRVQTTLASEHLLNEDGNFEIVKTFKATTSGK PEQTCIRCIHPDEEPLRNLLGMKISELKAVGKEVEKNVADKRTASLWRQAIREAAAPYTC SEIMLDVDKEFGTDTKSLWGKILDLLPTYAIFKADRESSDGDSEAKNPLQQAVKDAQAAL QDKITALENEIQDSVLDVAQRTLDKLREMAPELASELTPRFKEKPKWTFNFTLDGENGIP INKRGSGIRRLILLNFFRAEAEKNVAGTPRNVIYAIEEPETSQHPNYQMMLMKALLALAG QPHRQIIVTTHVPALAGLIPVEGVRYVTRNEAGEPVVKMPDDAVLKEATESLGVLPETGM ERAQGIVLVEGKSDVTFLRHAASSLKQSGALPASLEDVKIVPVLIGGCGSVKHWVTLNLA KDLGLPWCVFLDSDIGGDPAQVLSIQKRKKEVEEAGKVFFATRKREIENYLCPDLIEEIT GVAVTFTDTCDAKKIIGRAVGMKPDNVLDKFWPQMTSERIISRSTYHDGTQERSELVEIL SDIVSMTR >gi|333596726|gb|GL892086.1| GENE 2179 2335855 - 2336205 296 116 aa, chain - ## HITS:1 COG:mlr5326 KEGG:ns NR:ns ## COG: mlr5326 COG3544 # Protein_GI_number: 13474444 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 10 112 20 124 130 75 46.0 3e-14 MKARNTLFAVLMLSLPAISAEHSEMKMTDMSTSASSQEYMAGMKDMHDKMMAAVNESDPD KAFAKGMVAHHEGAIAMAETELKYGKDPKMRKLAQDIIKAQKGEIEQMNKWLDSQK >gi|333596726|gb|GL892086.1| GENE 2180 2336353 - 2336784 282 143 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3919 NR:ns ## KEGG: EC55989_3919 # Name: silE # Def: silver-binding protein SilE # Organism: E.coli_55989 # Pathway: not_defined # 1 143 40 182 182 225 100.0 4e-58 MKNIVLASLLGFGLISSAWATETVNIHERVNNAQAPAHQMQSAAAPVGIQGTAPRMAGMD QHEQAIIAHETMTNGSADAHQKMVESHQRMMGSQTVSPTGPSKSLAAMNEHERAAVAHEF MNNGQSGPHQAMAEAHRRMLSAG >gi|333596726|gb|GL892086.1| GENE 2181 2337029 - 2338510 666 493 aa, chain - ## HITS:1 COG:ECs0608 KEGG:ns NR:ns ## COG: ECs0608 COG0642 # Protein_GI_number: 15829862 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 480 1 479 482 518 57.0 1e-146 MHSKPSRRPFSLALRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNR ILQSPVDPDDKKISKIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHS RARDVFLWTVEDPAGPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHY LDALKKNLIAIAVVISLLIVLIIRIAVRQGHLPLRNVSNAIKNITSENLDARLEPTRVPI ELEQLVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQRELED VLYSSLEEYNRMTKMVSDMLFLAQADNNQLIPDRVMFDLRAEVMKVFEFFEAWAEERNIT LKFNGMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPI PEEHLSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGRVQVESDVHSTRFILSVP RLEKMIPDTQCWE >gi|333596726|gb|GL892086.1| GENE 2182 2338503 - 2339183 405 226 aa, chain - ## HITS:1 COG:ECs0609 KEGG:ns NR:ns ## COG: ECs0609 COG0745 # Protein_GI_number: 15829863 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 226 1 226 227 387 87.0 1e-108 MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGW DIIRMLRTAGKGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGN TMITESQFKVADLSIDLVSRKVSRAGNRIVLTSKEFSLLEFFIRHQGEVLPRSLIASQVW DMNFDSDTNAIDVAVKRLRAKIDNDYETKLIQTVRGVGYMLEVPDA >gi|333596726|gb|GL892086.1| GENE 2183 2339373 - 2340758 490 461 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 3 459 2 456 460 193 28 3e-47 MFKLKLLSISTIFILAGCVSLAPEYQRPAAPVPQQFSLSHNSLTPAVNGYQDTGWRNFFV DPQVTRLIGEALTNNRDLRMAALKVEEARAQFNVTDADRYPQLNASSGITYSGGLKGDKP TTQEYDARLELSYELDFFGKLKNMSDADRQNYFASEEARRAVHILLVSNVSQSYFSQQLA YEQLRIARETLKNYQQSYAFVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQAN NALQLVLGTYRALPSEKGMKGGEIAPVKLPPNLSSQILLQRPDIMEAEYQLKAADANIGA ARAAFFPSITLTSGLSASSTELSSLFTSGSGMWNFIPKIEIPIFNAGRNKANLKLAEIRQ QQSVVNYEQKIQSAFKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSY IEVLDAERSLFATQQTILDLTYSRQVNEINLFTALGGGWVE >gi|333596726|gb|GL892086.1| GENE 2184 2340786 - 2341139 339 117 aa, chain + ## HITS:1 COG:ylcC KEGG:ns NR:ns ## COG: ylcC COG5569 # Protein_GI_number: 16128556 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 116 1 110 110 90 47.0 6e-19 MRNSLKAVLFGAFSVMFSAGLHAETHQHGDMNTASDASVQQVIKGTGVVKDIDMNTKKIT ISHEAIPAVGWPAMTMRFTFVNADDAINALKTGNHVDFSFIQQGNISLLKSINVTQS >gi|333596726|gb|GL892086.1| GENE 2185 2341253 - 2342545 983 430 aa, chain + ## HITS:1 COG:ylcD KEGG:ns NR:ns ## COG: ylcD COG0845 # Protein_GI_number: 16128557 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 6 414 1 406 407 557 67.0 1e-158 MASLKIKYAAIIISSLIAGGLISVTAWQYVNSAQKTEKTEQKAPERKVLFWYDPMKPDTK FDKPGKSPFMDMDLVPKYADDSGDKSSGGIRIDPTQVQNLGLKTQKVTRGMLNYSQTIPA NVSYNEYQFVIVQARSDGFVEKVYPMTIGDHVKKGTPLIDITIPDWVEAQSEFLLLSSTG GTSTQIKGVLERLRLAGMPEEDIQRLRSTRSIQTRFTIKAPIDGVITAFDLRTGMNISKD KVVAQIQGMDPVWISAAVPESIAYLLKDTSQFEISVPAYPDKTFHVEKWNILPSVDQTTR TLQVRLQVSNKDEFLKPGMNAYLKLNTRSQEMLLIPSQAVIDTGKEQRVITVDDEGKFVP KQIHVLHESQQQSGIGSGLNEGDTVVVSGLFLIDSEANITGALERMRHPEKTESSMPAMS DQPVNMHSGH >gi|333596726|gb|GL892086.1| GENE 2186 2342556 - 2345702 3315 1048 aa, chain + ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1044 1 1044 1047 1821 87.0 0 MIEWIIRRSVANRFLVMMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDLYWARSRVLEYLNQVQGK LPAGVSSEIGPDATGVGWIFEYALVDRSGKHDLSELRSLQDWFLKFELKTIPNVAEVASV GGVVKQYQIQVNPVKLSQYGISLPEVKQALESSNQEAGGSSVEMAEAEYMVRASGYLQSI DDFNNIVLKTGENGVPVYLRDVARVQTGPEMRRGIAELNGQGEVAGGVVILRSGKNARDV ITAVRDKLETLKASLPEGVEIVTTYDRSQLIDRAIDNLSSKLLEEFIVVAIVCALFLWHV RSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE WDHQHPGEQIDNATRWKVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF TKTYSMAGAAALAIIVIPILMGFWIRGKIPAETSNPLNRVLIKAYHPLLLRVLHWPKTTL LVAALSIFTVIWPLSQVGGEFLPKINEGDLLYMPSTLPGVSPAEAAALLQTTDKLIKSVP EVASVFGKTGKAETATDSAPLEMVETTIQLKPEDQWRPGMTIDKIIEELDRTVRLPGLAN LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLSDIDATAQSIEAVAKTVPGVVSALAERLEG GRYIDVDINREKASRYGMTVGDVQLFISSAIGGATVGETVEGVARYPINIRYPQDYRNSP QALKQMPILTPMKQQITLGDVADIKVVSGPTMLKTENARPASWIYIDARGRDMVSVVNDI KTAISQKVKLRPGTSVSFSGQFELLEHANKKLKLMVPMTVMIIFILLYLAFRRVDEALLI LMSLPFALVGGIWFLYWQGFHMSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAHPELSR KETFTPEGLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM ITAPLLSLFIIPAAYKLIWLRRHKKSVS >gi|333596726|gb|GL892086.1| GENE 2187 2345788 - 2346228 333 146 aa, chain + ## HITS:1 COG:SMa1008 KEGG:ns NR:ns ## COG: SMa1008 COG3019 # Protein_GI_number: 16262997 # Func_class: R General function prediction only # Function: Predicted metal-binding protein # Organism: Sinorhizobium meliloti # 5 145 61 198 202 109 43.0 1e-24 MKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQALS ALKEKHAIPAGLRSCHTAVAGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPGME MGARKEAYDVIAFSPDGSKKVFQRIE >gi|333596726|gb|GL892086.1| GENE 2188 2346409 - 2346621 58 70 aa, chain - ## HITS:1 COG:no KEGG:ESA_04244 NR:ns ## KEGG: ESA_04244 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 10 70 23 83 83 103 100.0 2e-21 MIVVMVMGMFTGIFGKITIGMGFKFTLTAGGAEIKLMVLVSNAAVRPVGQDGHPAHGISH LMQYVALVRG >gi|333596726|gb|GL892086.1| GENE 2189 2346814 - 2348802 948 662 aa, chain + ## HITS:1 COG:SMa1087 KEGG:ns NR:ns ## COG: SMa1087 COG2217 # Protein_GI_number: 16263042 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Sinorhizobium meliloti # 1 660 75 733 733 818 67.0 0 MTRRFWLGLLLAFPVLVLEMGSHLFPELRNTVPPQYNTWLQLLLASPVVLWCGWPFFARA GMSLRNRSLNMFTLVAMGTGVAWVYSVIATVFPSWFPASFRNMDGLVAVYFEAAAVITVL VLLGQVLELRAREQTSGAITALLNLAPKTARRLDHDGHETDINAEDVLPGDKLRIRPGES IPVDGIVIEGKTTVDESMVTGESMPVTKTEGDPVIGGTINQTGSLIIRAEKVGDETMLSR IVQMVADAQRSRAPIQRMADSVSGWFVPLVILIAVVAFVIWSVWGPEPRMAHGLIAAVSV LIIACPCALGLATPMSIMVGVGKGAQAGVLIRNAEALERLEKVDTLVVDKTGTLTEGSPT VTGIISLNPGGETSLLRVTAAVEKGSQHPLGMAVVKAAQEKGIAIPAVTHFDAPSGKGVS GDVEGQRVVIGNELAMQENSIVIDNQKAVADTLRMEGATVIYVATDGDLAGLIAISDPVK TTTPDALKALRQAGIRIVMLTGDNQLTAEAVARKLGIDEVEAGILPDGKKAVITRLKESG HVVAMAGDGVNDAPALAAADVGIAMGTGTDVAIESAGVTLLKGDLMILNRARHLSEITMK NIRQNLFFAFIYNALGVPVAAGLLYPVYGILLSPVIAAAAMALSSVSVIVNALRLKSVRL GK >gi|333596726|gb|GL892086.1| GENE 2190 2348843 - 2349040 128 65 aa, chain + ## HITS:1 COG:no KEGG:Sputcn32_0265 NR:ns ## KEGG: Sputcn32_0265 # Name: not_defined # Def: hypothetical protein # Organism: S.putrefaciens # Pathway: not_defined # 1 65 1 65 65 66 100.0 3e-10 MKSTTYALIAVAAIAAFALLREHWSHVAGYWPYLLLLVCPLMHLFHGHGGHGDHQHHGSE NDKKN >gi|333596726|gb|GL892086.1| GENE 2191 2349074 - 2349811 200 245 aa, chain - ## HITS:1 COG:STM1890 KEGG:ns NR:ns ## COG: STM1890 COG0739 # Protein_GI_number: 16765232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 14 217 198 407 439 166 40.0 3e-41 MYSTDVVKENAYLSATRSGLESNEIATLQRSLPSRFNLRHLKKNESLKLVLQKKAGKSRV VAYKFTSGSFNYTAYRISDKKFYNLSDTSGKGSLDYPLPATARLSSPFNPARLNPVSGKV SPHNGIDYSMPMNTKIVSVIDGKITRAEYNSTMGYFVEVTGKAGVKTRYLHLNKILVTKG ARVTRGGAIALSGNSGRSSGPHLHYELVINNNPVNSLAFRAAAPADNKLEQHAFAHARDY ERYLD >gi|333596726|gb|GL892086.1| GENE 2192 2350100 - 2350549 102 149 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3907 NR:ns ## KEGG: EC55989_3907 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 149 1 149 149 207 100.0 2e-52 MNILITTTAFTALFCGAAFAQSSDIAHEAHRFVNNASAVSHVNSSTHENLPDRVNKNNTP SFSEMNEHERAIVAHSFMNNSASYAHQKMIEEHKKMLSGSDANSKTSSSSFNELNAGEKA ALVHEQVNNAGAEAHQTQARKLRGLYSTR >gi|333596726|gb|GL892086.1| GENE 2193 2350784 - 2352601 1382 605 aa, chain + ## HITS:1 COG:PA2065 KEGG:ns NR:ns ## COG: PA2065 COG2132 # Protein_GI_number: 15597261 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Pseudomonas aeruginosa # 4 605 3 628 632 853 70.0 0 MLLKTSRRTFLKGLTLSGVAGSLGVWSFNARSSLSLPVAASLQGTQFDLTIGETAVNITG SERQAKTINGGLPGPVLRWKEGDTITLKVKNRLNEQTSIHWHGIILPANMDGVPGLSFMG IEPDDTYVYTFKVKQNGTYWYHSHSGLQEQEGVYGAIIIDAGEPEPFTYDREHVVMLSDW TDENPHSLLKKLKKQSDYYNFNKPTVGSFFRDVNTRGLSATIADRKMWAEMKMNPTDLAD VSGYTYTYLMNGQAPLKNWTGLFRPGEKIRLRFINGSAMTYFDIRIPGLKMTVVAADGQY VNPVTVDEFRIAVAETYDVIVEPQGEAYTIFAQSMDRTGYARGTLATREGLSAAVPPLDP RPLLTMEDMGMGGMGHDMAGMDHSQMGGMDNSGEMMSMDGADLPDSGTSSAPMDHSSMAG MDHSRMAGMPGMQSHPASETDNPLVDMQAMSVSPKLNDPGIGLRNNGRKVLTYADLKSRF EDPDGREPGRTIELHLTGHMEKFAWSFNGIKFSDAAPVLLKYGERLRITLINDTMMTHPI HLHGMWSDLEDENGNFMVRKHTIDVPPGTKRSYRVTADALGRWAYHCHLLYHMEMGMFRE VRVEE >gi|333596726|gb|GL892086.1| GENE 2194 2352607 - 2353497 225 296 aa, chain + ## HITS:1 COG:PA2064 KEGG:ns NR:ns ## COG: PA2064 COG3667 # Protein_GI_number: 15597260 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Pseudomonas aeruginosa # 23 296 52 325 325 328 58.0 7e-90 MKRNLKAIPVLVAGLFTSQLSIAAGSVSADPHAGHDMSAMQMPADENFTEMTSMEPIVTE SRTPIPPVTDADRKAAFGNLQGHAIHDSAINYLVLLDQLEWQRSDNTNNFSWSVNSWIGG DTDRIWLKSEGERSNGETEAAEAQLLWGHAVGPWWDLVAGVRQDFRPASARTWAAVGFQG LALYNFESEITGFVSNGGKAALRLGGEYDVLLTNRLILQPSYEVNFYSQDDESRGRGRGL TDTELGLRLRYEIRREFAPYIGVSWNQLYGKTSDMAKREGEKDHQVVFLAGARIWF >gi|333596726|gb|GL892086.1| GENE 2195 2353537 - 2353917 218 126 aa, chain + ## HITS:1 COG:RSp0658 KEGG:ns NR:ns ## COG: RSp0658 COG2372 # Protein_GI_number: 17548879 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Ralstonia solanacearum # 23 126 25 128 128 104 55.0 4e-23 MSILNKAILTGGLVMGVAFSAMAHPELKSSVPQADSAVAAPEKIQLNFSENLTVKFSGAK LTMTGMKGMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGN YTFTVK >gi|333596726|gb|GL892086.1| GENE 2196 2353922 - 2354851 543 309 aa, chain + ## HITS:1 COG:RSp0659 KEGG:ns NR:ns ## COG: RSp0659 COG1276 # Protein_GI_number: 17548880 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Ralstonia solanacearum # 2 305 3 306 309 138 36.0 2e-32 MNDLIMIVIRFLLYLDLMVIFGLPFFQIYGISGVRHETYNLTNFRSFITFAVVTGIILTG INMLLVSNAMSGVTDLRELSIHVIEMVIEETDVGISWIVRLCALFTTLGALFLYTNKRVL SCLLMTMSGGVALATLAWGGHAVMHDGLHYYLHLLSDLTHLGAAGAWTGALVAFAILLMR RNEHNAQSVIVISDSLAKFATAGTVIVVALILSALVNYLYIAEGNLTPLFNSSWGRILLA KTALFVLMLLLAAANRFHLGPRLEVMVREGNYDRSVALMRNSILTEFVVAIIILGAVAWL GMLAPSQVS >gi|333596726|gb|GL892086.1| GENE 2197 2354906 - 2355586 499 226 aa, chain + ## HITS:1 COG:RSp0655 KEGG:ns NR:ns ## COG: RSp0655 COG0745 # Protein_GI_number: 17548876 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 3 226 2 226 228 278 65.0 6e-75 MQRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDG WQIISALRESGHEEPVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRRA RSQAATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLELLLQRTGEVLPRSLISSLVW NMNFDSDTNVIDVAVRRLRSKIDDDFEPKLIHTVRGAGYVLEIREE >gi|333596726|gb|GL892086.1| GENE 2198 2355637 - 2356983 690 448 aa, chain + ## HITS:1 COG:RSp0654 KEGG:ns NR:ns ## COG: RSp0654 COG0642 # Protein_GI_number: 17548875 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 114 445 125 455 466 241 39.0 2e-63 MLTVWWLSSFILISTLNGYFDNQDRDFLTGKLQLTEEFLKTETFRNKTDIKSLSEKINDA MVGHNGLFISIKNMENEKIVELYAKNSVVPAVLLNKSGDILDYMIQTEENNTVYRSISRR VAVTPEQGKSKHVIITVATDTGYHTLFMDKLSTWLFWFNIGLVFISVFLGWLTTRIGLKP LREMTSLASSMTVHSLDQRLNPDLAPPEISETMQEFNNMFDRLEGAFRKLSDFSSDIAHE LRTPVSNLMMQTQFALAKERDVSHYREILFANLEELKRLSRMTSDMLFLARSEHGLLRLD KHDVDLAAELNELRELFEPLADETGKTITVEGEGVVAGDSDMLRRAFSNLLSNAIKYSPD NTCTAIHLERDSDCVNVMITNTMSGQVPANLERLFDRFYRADSSRFYNTEGAGLGLSITR SIIHAHGGELSAEQQGREIVFKVRLLMD >gi|333596726|gb|GL892086.1| GENE 2199 2357201 - 2357635 309 144 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1R123 NR:ns ## KEGG: APECO1_O1R123 # Name: pcoE # Def: PcoE # Organism: E.coli_APEC # Pathway: not_defined # 1 144 1 144 144 142 100.0 4e-33 MKKILVSFVAIMAAASSAMAAETMNMHDQVNNAQAPAHQMQSSAEKSAIQGDSMTMMDMS SHDQAAMSHDMMQNSNSAAHQDMAEMHKKMMKAKPGATNETAKSFSEMSEHEKAAAVHEK ANNGQSSVVHQQQADKHRSQITQN Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:15:21 2011 Seq name: gi|333596725|gb|GL892087.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD2, whole genome shotgun sequence Length of sequence - 2170907 bp Number of predicted genes - 1989, with homology - 1951 Number of transcription units - 1038, operones - 440 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.649 + CDS 81 - 1007 1007 ## COG3327 Phenylacetic acid-responsive transcriptional repressor 2 1 Op 2 . + CDS 1017 - 1622 757 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Prom 1628 - 1687 2.8 3 2 Tu 1 . + CDS 1804 - 3801 2146 ## COG1292 Choline-glycine betaine transporter 4 3 Op 1 . - CDS 3857 - 4582 673 ## ROD_12291 hypothetical protein 5 3 Op 2 . - CDS 4611 - 4808 163 ## ECL_02107 hypothetical protein - Prom 4967 - 5026 7.8 + Prom 4899 - 4958 5.4 6 4 Op 1 . + CDS 5067 - 5501 429 ## ECL_02106 hypothetical protein 7 4 Op 2 3/0.435 + CDS 5498 - 6217 326 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 8 4 Op 3 6/0.131 + CDS 6214 - 7473 1167 ## COG2907 Predicted NAD/FAD-binding protein 9 4 Op 4 4/0.342 + CDS 7475 - 8197 537 ## COG3496 Uncharacterized conserved protein 10 4 Op 5 . + CDS 8194 - 9414 1318 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 11 4 Op 6 . + CDS 9411 - 9896 595 ## ECL_02101 hypothetical protein 12 4 Op 7 . + CDS 9911 - 10417 466 ## Ent638_1485 hypothetical protein 13 4 Op 8 . + CDS 10414 - 10947 627 ## ECL_02099 hypothetical protein - Term 10881 - 10918 7.8 14 5 Op 1 . - CDS 10944 - 11402 600 ## Dd1591_2577 hypothetical protein 15 5 Op 2 . - CDS 11407 - 11841 609 ## Ent638_1093 hypothetical protein - Prom 11897 - 11956 2.3 + Prom 11781 - 11840 4.5 16 6 Tu 1 . + CDS 11939 - 12871 832 ## COG0583 Transcriptional regulator + Term 13052 - 13102 3.1 17 7 Op 1 . - CDS 12875 - 13903 1228 ## COG0620 Methionine synthase II (cobalamin-independent) 18 7 Op 2 . - CDS 13931 - 14905 988 ## ECL_02094 hypothetical protein + Prom 14989 - 15048 4.2 19 8 Tu 1 . + CDS 15074 - 15613 812 ## COG3122 Uncharacterized protein conserved in bacteria 20 9 Op 1 . - CDS 15621 - 16319 235 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Term 16354 - 16389 6.5 21 9 Op 2 . - CDS 16397 - 17002 916 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 17167 - 17226 5.0 + Prom 17098 - 17157 2.3 22 10 Tu 1 . + CDS 17237 - 21109 4919 ## COG1643 HrpA-like helicases + Term 21170 - 21209 5.2 23 11 Op 1 . - CDS 21204 - 21863 615 ## COG4122 Predicted O-methyltransferase 24 11 Op 2 4/0.342 - CDS 21939 - 23318 497 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 25 11 Op 3 19/0.000 - CDS 23315 - 24397 1227 ## COG1566 Multidrug resistance efflux pump 26 11 Op 4 . - CDS 24419 - 26071 1927 ## COG0477 Permeases of the major facilitator superfamily - Prom 26110 - 26169 5.0 + Prom 26090 - 26149 3.4 27 12 Tu 1 . + CDS 26285 - 27079 807 ## COG1434 Uncharacterized conserved protein + Term 27085 - 27130 9.5 + Prom 27184 - 27243 5.5 28 13 Tu 1 . + CDS 27278 - 28717 2012 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 28724 - 28755 2.4 - Term 28712 - 28743 2.4 29 14 Tu 1 . - CDS 28763 - 29170 439 ## ECL_02082 hypothetical protein - Prom 29282 - 29341 2.1 + Prom 29709 - 29768 6.6 30 15 Tu 1 . + CDS 29907 - 30437 645 ## COG3038 Cytochrome B561 + Term 30440 - 30482 5.2 - Term 30433 - 30466 4.5 31 16 Op 1 1/0.649 - CDS 30480 - 31547 1270 ## COG0673 Predicted dehydrogenases and related proteins 32 16 Op 2 . - CDS 31561 - 32304 628 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 32545 - 32604 12.1 + Prom 32895 - 32954 3.4 33 17 Tu 1 . + CDS 33043 - 34374 865 ## COG1538 Outer membrane protein 34 18 Op 1 . + CDS 34495 - 41904 7891 ## EFER_0542 adhesin for cattle intestine colonization 35 18 Op 2 . + CDS 41753 - 52522 11982 ## ECUMN_0527 adhesin for cattle intestine colonization + Term 52529 - 52564 7.2 36 19 Op 1 13/0.014 + CDS 52594 - 54759 197 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 37 19 Op 2 . + CDS 54756 - 55931 1132 ## COG0845 Membrane-fusion protein + Term 55974 - 56012 6.1 - Term 55924 - 55957 4.5 38 20 Tu 1 . - CDS 55965 - 56672 338 ## ECL_02072 hypothetical protein - Prom 56908 - 56967 6.1 + Prom 57437 - 57496 1.6 39 21 Tu 1 . + CDS 57676 - 58593 319 ## COG2200 FOG: EAL domain 40 22 Op 1 . - CDS 58679 - 58957 400 ## JW1153 hypothetical protein 41 22 Op 2 . - CDS 58981 - 59280 173 ## gi|261339762|ref|ZP_05967620.1| conserved hypothetical protein 42 23 Tu 1 . - CDS 59399 - 59638 165 ## ECS88_1225 hypothetical protein - Prom 59682 - 59741 2.6 - Term 59796 - 59821 -0.5 43 24 Tu 1 . - CDS 59827 - 60099 305 ## ECL_02069 hypothetical protein 44 25 Tu 1 . - CDS 60268 - 60891 397 ## KP1_4241 putative transport protein - Prom 60967 - 61026 3.4 - Term 61187 - 61230 3.3 45 26 Op 1 . - CDS 61232 - 61480 162 ## 46 26 Op 2 . - CDS 61480 - 61791 71 ## Rahaq_4636 hypothetical protein 47 27 Tu 1 . - CDS 61959 - 62441 370 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 62594 - 62653 4.3 - Term 62615 - 62650 2.0 48 28 Tu 1 . - CDS 62663 - 62905 297 ## + Prom 62875 - 62934 2.4 49 29 Tu 1 . + CDS 62962 - 64080 1443 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 64087 - 64122 7.4 + Prom 64083 - 64142 2.7 50 30 Tu 1 . + CDS 64240 - 65931 1860 ## COG0840 Methyl-accepting chemotaxis protein + Term 65938 - 65975 2.6 - Term 65926 - 65961 3.1 51 31 Tu 1 . - CDS 65973 - 66896 827 ## COG0583 Transcriptional regulator - Prom 66963 - 67022 3.6 + Prom 66927 - 66986 5.3 52 32 Op 1 1/0.649 + CDS 67124 - 68467 1553 ## COG5383 Uncharacterized protein conserved in bacteria 53 32 Op 2 . + CDS 68510 - 70015 1316 ## COG2272 Carboxylesterase type B 54 33 Tu 1 . - CDS 70002 - 70844 836 ## COG0583 Transcriptional regulator - Prom 70871 - 70930 3.5 + Prom 70830 - 70889 3.5 55 34 Op 1 . + CDS 70958 - 72127 1046 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 56 34 Op 2 . + CDS 72138 - 72911 941 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 72923 - 72962 5.1 + Prom 72951 - 73010 3.9 57 35 Op 1 . + CDS 73142 - 74797 2081 ## COG3131 Periplasmic glucans biosynthesis protein 58 35 Op 2 . + CDS 74855 - 75394 597 ## PROTEIN SUPPORTED gi|218548861|ref|YP_002382652.1| ribosomal-protein-L7/L12-serine acetyltransferase + Term 75406 - 75446 2.3 59 36 Tu 1 . - CDS 75389 - 76369 736 ## ECL_02033 putative nucleoside-diphosphate-sugar pyrophosphorylase - Prom 76465 - 76524 7.5 + Prom 76405 - 76464 4.8 60 37 Op 1 4/0.342 + CDS 76491 - 77486 998 ## COG1275 Tellurite resistance protein and related permeases 61 37 Op 2 . + CDS 77486 - 78079 881 ## COG0500 SAM-dependent methyltransferases 62 38 Tu 1 . - CDS 78076 - 79305 1407 ## COG2195 Di- and tripeptidases - Prom 79341 - 79400 6.0 + Prom 79298 - 79357 2.9 63 39 Tu 1 . + CDS 79417 - 81012 1969 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 81022 - 81053 1.1 + Prom 81056 - 81115 3.0 64 40 Tu 1 . + CDS 81147 - 81821 571 ## ECL_02028 putative outer membrane lipoprotein + Term 81826 - 81863 4.5 65 41 Tu 1 . - CDS 81855 - 82751 867 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 82806 - 82865 2.2 66 42 Tu 1 . + CDS 82926 - 83798 929 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 83890 - 83920 -0.5 - Term 83650 - 83694 -0.7 67 43 Tu 1 . - CDS 83778 - 84944 1247 ## COG3135 Uncharacterized protein involved in benzoate metabolism 68 44 Op 1 3/0.435 + CDS 85037 - 85564 410 ## COG1396 Predicted transcriptional regulators 69 44 Op 2 . + CDS 85645 - 87609 2334 ## COG0826 Collagenase and related proteases + Term 87701 - 87751 11.1 - Term 87517 - 87547 -0.2 70 45 Tu 1 . - CDS 87606 - 87812 208 ## Ent638_1984 hypothetical protein - Prom 87887 - 87946 4.7 + Prom 87944 - 88003 5.4 71 46 Tu 1 . + CDS 88083 - 88445 227 ## ECL_02021 hypothetical protein + Term 88562 - 88592 1.0 72 47 Tu 1 . - CDS 88597 - 89604 639 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - Prom 89625 - 89684 1.7 + Prom 89578 - 89637 1.9 73 48 Op 1 . + CDS 89666 - 90076 379 ## COG0607 Rhodanese-related sulfurtransferase + Term 90112 - 90149 0.3 + Prom 90085 - 90144 2.3 74 48 Op 2 . + CDS 90233 - 91336 1329 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 91341 - 91390 7.4 + Prom 91409 - 91468 1.9 75 49 Op 1 20/0.000 + CDS 91539 - 92810 1667 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 76 49 Op 2 24/0.000 + CDS 92835 - 94409 1780 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 77 49 Op 3 9/0.047 + CDS 94409 - 95482 1314 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 78 49 Op 4 9/0.047 + CDS 95482 - 96279 199 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 79 49 Op 5 . + CDS 96289 - 96987 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 80 49 Op 6 . + CDS 97040 - 97678 732 ## COG3443 Predicted periplasmic or secreted protein + Term 97683 - 97740 2.0 81 50 Tu 1 . - CDS 97724 - 98941 1433 ## COG0477 Permeases of the major facilitator superfamily - Prom 99104 - 99163 4.6 + Prom 98915 - 98974 3.3 82 51 Tu 1 . + CDS 99135 - 100034 1154 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 100034 - 100063 3.5 83 52 Op 1 . - CDS 100073 - 100288 321 ## Ent638_1996 hypothetical protein 84 52 Op 2 3/0.435 - CDS 100321 - 100701 413 ## COG2207 AraC-type DNA-binding domain-containing proteins 85 52 Op 3 . - CDS 100722 - 101099 392 ## COG1846 Transcriptional regulators - Prom 101187 - 101246 4.3 + Prom 101143 - 101202 3.9 86 53 Tu 1 . + CDS 101413 - 102078 615 ## COG2095 Multiple antibiotic transporter - Term 102120 - 102169 2.5 87 54 Tu 1 . - CDS 102174 - 103370 1513 ## COG2814 Arabinose efflux permease - Prom 103404 - 103463 4.0 + Prom 103453 - 103512 2.6 88 55 Op 1 . + CDS 103547 - 104335 957 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 89 55 Op 2 . + CDS 104358 - 105170 790 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 90 56 Tu 1 . - CDS 105167 - 106045 864 ## COG0583 Transcriptional regulator - Prom 106078 - 106137 1.8 + Prom 106030 - 106089 3.6 91 57 Tu 1 . + CDS 106145 - 107527 1568 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 107567 - 107626 3.0 92 58 Op 1 . + CDS 107655 - 109244 1418 ## COG0840 Methyl-accepting chemotaxis protein 93 58 Op 2 . + CDS 109331 - 110233 929 ## COG2066 Glutaminase 94 58 Op 3 . + CDS 110233 - 110595 168 ## ECL_01989 putative cytoplasmic protein + Term 110622 - 110674 2.1 95 59 Op 1 1/0.649 + CDS 110693 - 111619 815 ## COG2203 FOG: GAF domain 96 59 Op 2 . + CDS 111702 - 112229 420 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 112287 - 112329 -0.2 + Prom 112263 - 112322 1.8 97 60 Tu 1 . + CDS 112347 - 113798 1635 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 113807 - 113834 1.5 + Prom 113916 - 113975 4.0 98 61 Tu 1 . + CDS 114000 - 114914 995 ## COG3781 Predicted membrane protein 99 62 Tu 1 . - CDS 114902 - 115450 500 ## ECL_01982 putative acetyltransferase - Prom 115596 - 115655 5.1 + Prom 115480 - 115539 3.7 100 63 Tu 1 . + CDS 115599 - 116561 210 ## Pvag_1049 hypothetical protein + Prom 116676 - 116735 2.5 101 64 Op 1 . + CDS 116813 - 117169 70 ## ECL_01981 hypothetical protein 102 64 Op 2 4/0.342 + CDS 117166 - 117606 365 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 117653 - 117712 1.7 103 65 Op 1 3/0.435 + CDS 117741 - 118736 1029 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 104 65 Op 2 40/0.000 + CDS 118781 - 119521 726 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 105 65 Op 3 . + CDS 119518 - 120813 936 ## COG0642 Signal transduction histidine kinase 106 66 Tu 1 . + CDS 120949 - 122139 1042 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Term 121925 - 121969 4.1 107 67 Op 1 . - CDS 122146 - 122904 662 ## COG4106 Trans-aconitate methyltransferase - Term 122930 - 122979 6.7 108 67 Op 2 . - CDS 122989 - 123573 588 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 123594 - 123653 3.6 + Prom 123494 - 123553 3.7 109 68 Tu 1 . + CDS 123660 - 124418 633 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 124442 - 124501 1.8 110 69 Tu 1 . + CDS 124523 - 125815 764 ## COG5434 Endopolygalacturonase 111 70 Tu 1 . - CDS 125820 - 126437 299 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 126473 - 126532 2.9 + Prom 127082 - 127141 4.1 112 71 Tu 1 . + CDS 127331 - 128155 100 ## COG0582 Integrase + Prom 128970 - 129029 1.9 113 72 Tu 1 . + CDS 129189 - 129707 -18 ## COG0582 Integrase + Prom 129835 - 129894 2.4 114 73 Op 1 . + CDS 129970 - 132057 325 ## Pcryo_1367 hypothetical protein 115 73 Op 2 . + CDS 132057 - 132491 372 ## Pcryo_1366 hypothetical protein + Term 132516 - 132556 -0.2 116 74 Tu 1 . - CDS 132696 - 132911 70 ## COG1396 Predicted transcriptional regulators + Prom 133038 - 133097 5.7 117 75 Op 1 . + CDS 133126 - 133686 39 ## gi|322616177|gb|EFY13093.1| hypothetical protein SEEM315_02508 118 75 Op 2 . + CDS 133719 - 133877 79 ## + Prom 133952 - 134011 3.3 119 76 Tu 1 . + CDS 134093 - 134290 89 ## Dd1591_3701 XRE family transcriptional regulator 120 77 Op 1 . - CDS 134379 - 135797 430 ## MDS_2496 hypothetical protein 121 77 Op 2 . - CDS 135787 - 137523 815 ## MDS_2495 hypothetical protein - Prom 137630 - 137689 2.8 122 78 Tu 1 . + CDS 137869 - 140667 1302 ## blr8180 hypothetical protein 123 79 Tu 1 . - CDS 140951 - 142093 434 ## CbC4_4079 hypothetical protein - Prom 142113 - 142172 2.2 + Prom 141729 - 141788 6.2 124 80 Op 1 4/0.342 + CDS 141965 - 143323 1492 ## COG3119 Arylsulfatase A and related enzymes + Term 143336 - 143372 6.1 125 80 Op 2 . + CDS 143415 - 144710 995 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 126 80 Op 3 23/0.000 + CDS 144707 - 145711 1137 ## COG0714 MoxR-like ATPases 127 80 Op 4 . + CDS 145711 - 146616 474 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 128 80 Op 5 . + CDS 146617 - 147057 263 ## EbC_21230 conserved uncharacterized protein 129 80 Op 6 5/0.212 + CDS 147050 - 148027 765 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 130 80 Op 7 . + CDS 148024 - 149538 1071 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 131 80 Op 8 . + CDS 149535 - 150548 414 ## EbC_21200 hypothetical protein 132 80 Op 9 . + CDS 150545 - 151543 1159 ## EbC_21190 NapD-like protein + Term 151564 - 151591 0.1 133 81 Op 1 1/0.649 - CDS 152061 - 152327 318 ## COG4453 Uncharacterized protein conserved in bacteria - Prom 152353 - 152412 6.3 - Term 152360 - 152402 10.4 134 81 Op 2 . - CDS 152416 - 153321 617 ## COG0583 Transcriptional regulator + Prom 153362 - 153421 3.3 135 82 Tu 1 . + CDS 153450 - 154838 783 ## COG0477 Permeases of the major facilitator superfamily - Term 154802 - 154841 7.5 136 83 Op 1 . - CDS 154859 - 155854 1123 ## ECL_01955 hypothetical protein 137 83 Op 2 6/0.131 - CDS 155864 - 156850 1398 ## COG3817 Predicted membrane protein 138 83 Op 3 . - CDS 156847 - 157569 969 ## COG3819 Predicted membrane protein - Prom 157726 - 157785 4.7 + Prom 157571 - 157630 4.8 139 84 Tu 1 . + CDS 157794 - 158342 531 ## COG5631 Predicted transcription regulator, contains HTH domain (MarR family) 140 85 Op 1 3/0.435 - CDS 158339 - 160414 2398 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 141 85 Op 2 4/0.342 - CDS 160429 - 162897 2485 ## COG3280 Maltooligosyl trehalose synthase 142 85 Op 3 . - CDS 162894 - 164681 1312 ## COG0296 1,4-alpha-glucan branching enzyme + Prom 164731 - 164790 2.2 143 86 Tu 1 . + CDS 164813 - 165340 499 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 165359 - 165418 5.2 144 87 Tu 1 . + CDS 165452 - 166336 996 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 145 88 Tu 1 . + CDS 166444 - 167421 985 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 167628 - 167660 -0.3 146 89 Tu 1 . - CDS 167440 - 168324 760 ## COG0583 Transcriptional regulator - Prom 168346 - 168405 2.6 + Prom 168313 - 168372 4.5 147 90 Tu 1 . + CDS 168436 - 169917 1524 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases + Prom 169948 - 170007 4.5 148 91 Op 1 . + CDS 170048 - 170335 145 ## COG4628 Uncharacterized conserved protein 149 91 Op 2 . + CDS 170343 - 171632 1092 ## COG1649 Uncharacterized protein conserved in bacteria + Term 171637 - 171682 10.6 - Term 171630 - 171664 6.2 150 92 Op 1 . - CDS 171671 - 172447 903 ## COG1651 Protein-disulfide isomerase 151 92 Op 2 . - CDS 172489 - 173046 384 ## ECL_01937 RNA polymerase, sigma-24 subunit, ECF subfamily 152 92 Op 3 . - CDS 173052 - 173450 364 ## ECL_01936 hypothetical protein - Prom 173590 - 173649 2.9 - Term 173610 - 173652 5.3 153 93 Op 1 . - CDS 173655 - 175205 1507 ## COG0840 Methyl-accepting chemotaxis protein - Prom 175227 - 175286 3.4 154 93 Op 2 5/0.212 - CDS 175301 - 176317 992 ## COG1609 Transcriptional regulators 155 93 Op 3 1/0.649 - CDS 176346 - 177752 1075 ## COG1621 Beta-fructosidases (levanase/invertase) 156 93 Op 4 . - CDS 177752 - 179122 1855 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 157 93 Op 5 . - CDS 179189 - 180706 1927 ## COG4580 Maltoporin (phage lambda and maltose receptor) - Prom 180762 - 180821 3.1 - Term 180831 - 180868 8.7 158 94 Op 1 1/0.649 - CDS 180876 - 181772 730 ## COG0524 Sugar kinases, ribokinase family 159 94 Op 2 . - CDS 181861 - 182841 1008 ## COG2200 FOG: EAL domain 160 95 Tu 1 . - CDS 183159 - 184634 1351 ## COG2267 Lysophospholipase - Prom 184660 - 184719 3.1 161 96 Op 1 . + CDS 184902 - 185756 846 ## COG1737 Transcriptional regulators 162 96 Op 2 3/0.435 + CDS 185769 - 186341 742 ## COG2173 D-alanyl-D-alanine dipeptidase 163 96 Op 3 38/0.000 + CDS 186357 - 187889 2051 ## COG0747 ABC-type dipeptide transport system, periplasmic component 164 96 Op 4 49/0.000 + CDS 187913 - 188935 300 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 165 96 Op 5 44/0.000 + CDS 188932 - 189828 1074 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 166 96 Op 6 17/0.000 + CDS 189825 - 190811 484 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 167 96 Op 7 . + CDS 190804 - 191730 622 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 168 97 Tu 1 . - CDS 191727 - 192476 824 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 192446 - 192505 2.1 169 98 Tu 1 . + CDS 192626 - 193519 723 ## COG0583 Transcriptional regulator + Term 193587 - 193623 -0.5 - Term 193504 - 193540 2.2 170 99 Op 1 1/0.649 - CDS 193543 - 193971 603 ## COG1764 Predicted redox protein, regulator of disulfide bond formation 171 99 Op 2 . - CDS 194041 - 194928 814 ## COG0583 Transcriptional regulator - Prom 194954 - 195013 1.7 + Prom 194956 - 195015 1.5 172 100 Op 1 1/0.649 + CDS 195040 - 195891 995 ## COG0491 Zn-dependent hydrolases, including glyoxylases 173 100 Op 2 . + CDS 195943 - 196464 410 ## COG0346 Lactoylglutathione lyase and related lyases + Term 196468 - 196503 -1.0 + Prom 196510 - 196569 2.5 174 101 Op 1 . + CDS 196606 - 196821 179 ## ECL_01912 biofilm-dependent modulation protein 175 101 Op 2 . + CDS 196917 - 197054 183 ## PROTEIN SUPPORTED gi|146311699|ref|YP_001176773.1| 30S ribosomal subunit S22 + Term 197076 - 197110 4.3 + Prom 197093 - 197152 4.9 176 102 Tu 1 . + CDS 197231 - 198928 2272 ## COG0281 Malic enzyme + Term 199122 - 199163 1.6 + Prom 199022 - 199081 3.1 177 103 Tu 1 . + CDS 199316 - 201025 1701 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 201028 - 201069 10.3 + Prom 201108 - 201167 4.1 178 104 Tu 1 . + CDS 201222 - 202232 1101 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 202280 - 202321 11.1 179 105 Tu 1 . - CDS 202280 - 203455 1177 ## COG2814 Arabinose efflux permease - Prom 203489 - 203548 3.0 + Prom 203425 - 203484 3.1 180 106 Tu 1 . + CDS 203617 - 204432 788 ## COG2326 Uncharacterized conserved protein - Term 204889 - 204932 9.8 181 107 Op 1 12/0.016 - CDS 204936 - 205592 902 ## COG2864 Cytochrome b subunit of formate dehydrogenase 182 107 Op 2 16/0.000 - CDS 205585 - 206469 1058 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 183 107 Op 3 5/0.212 - CDS 206481 - 208892 3009 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 184 107 Op 4 . - CDS 208941 - 209528 630 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 209719 - 209778 1.8 + Prom 209516 - 209575 3.5 185 108 Tu 1 . + CDS 209749 - 210627 802 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 210632 - 210687 6.6 186 109 Tu 1 . + CDS 211253 - 212326 1360 ## COG3203 Outer membrane protein (porin) + Term 212345 - 212379 5.0 187 110 Tu 1 . - CDS 212370 - 213860 1764 ## COG0477 Permeases of the major facilitator superfamily - Prom 213898 - 213957 2.9 + Prom 213895 - 213954 2.6 188 111 Tu 1 . + CDS 213977 - 214552 633 ## COG1309 Transcriptional regulator + Term 214607 - 214657 5.1 + Prom 214635 - 214694 3.0 189 112 Op 1 10/0.036 + CDS 214762 - 216147 1336 ## COG2223 Nitrate/nitrite transporter 190 112 Op 2 13/0.014 + CDS 216215 - 219955 4445 ## COG5013 Nitrate reductase alpha subunit 191 112 Op 3 12/0.016 + CDS 219952 - 221496 1818 ## COG1140 Nitrate reductase beta subunit 192 112 Op 4 12/0.016 + CDS 221496 - 222191 920 ## COG2180 Nitrate reductase delta subunit 193 112 Op 5 . + CDS 222188 - 222868 619 ## COG2181 Nitrate reductase gamma subunit + Term 222922 - 222961 5.2 194 113 Tu 1 . - CDS 222949 - 223794 750 ## COG2162 Arylamine N-acetyltransferase + Prom 223627 - 223686 2.6 195 114 Tu 1 . + CDS 223900 - 224472 615 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 196 115 Tu 1 . - CDS 224754 - 224954 135 ## gi|288549663|ref|ZP_05967758.2| conserved hypothetical protein - Prom 225100 - 225159 2.6 + Prom 224809 - 224868 3.8 197 116 Tu 1 . + CDS 224960 - 225385 225 ## CKO_01383 hypothetical protein + Term 225417 - 225460 7.6 - Term 225405 - 225446 10.4 198 117 Tu 1 . - CDS 225453 - 227555 2511 ## COG0480 Translation elongation factors (GTPases) - Prom 227627 - 227686 4.1 + Prom 227575 - 227634 5.5 199 118 Tu 1 . + CDS 227717 - 228016 214 ## COG0640 Predicted transcriptional regulators + Term 228217 - 228259 3.2 200 119 Op 1 . - CDS 228009 - 228650 454 ## ECL_01884 hypothetical protein - Prom 228674 - 228733 4.2 - Term 228698 - 228734 4.4 201 119 Op 2 . - CDS 228742 - 229743 855 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 229826 - 229885 5.3 202 120 Op 1 . - CDS 229930 - 230160 349 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 203 120 Op 2 1/0.649 - CDS 230198 - 230815 786 ## COG0625 Glutathione S-transferase 204 120 Op 3 16/0.000 - CDS 230857 - 231744 983 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 205 120 Op 4 34/0.000 - CDS 231754 - 232527 259 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 206 120 Op 5 1/0.649 - CDS 232511 - 233437 1163 ## COG0765 ABC-type amino acid transport system, permease component 207 120 Op 6 5/0.212 - CDS 233447 - 233956 643 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 208 120 Op 7 . - CDS 233966 - 234898 1426 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 209 120 Op 8 1/0.649 - CDS 234913 - 236229 1127 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 210 120 Op 9 1/0.649 - CDS 236246 - 237367 1332 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 211 120 Op 10 . - CDS 237364 - 238365 1003 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 238390 - 238449 5.3 212 121 Tu 1 . - CDS 238475 - 238924 225 ## COG0563 Adenylate kinase and related kinases - Prom 239043 - 239102 3.8 + Prom 239035 - 239094 2.6 213 122 Tu 1 . + CDS 239159 - 239509 68 ## COG0583 Transcriptional regulator + Prom 239646 - 239705 4.1 214 123 Tu 1 . + CDS 239838 - 241334 2025 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 241341 - 241383 -0.4 - Term 241329 - 241368 5.2 215 124 Tu 1 . - CDS 241427 - 242488 1405 ## COG3391 Uncharacterized conserved protein - Prom 242637 - 242696 2.5 216 125 Op 1 . + CDS 242505 - 242723 73 ## 217 125 Op 2 . + CDS 242736 - 244853 2361 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Term 244890 - 244933 0.4 218 126 Tu 1 . - CDS 244985 - 245653 675 ## COG1802 Transcriptional regulators - Prom 245833 - 245892 5.6 - Term 245859 - 245899 8.1 219 127 Op 1 . - CDS 245910 - 246944 1280 ## COG2130 Putative NADP-dependent oxidoreductases 220 127 Op 2 . - CDS 247011 - 247586 398 ## COG1396 Predicted transcriptional regulators - Prom 247617 - 247676 3.6 + Prom 247545 - 247604 2.3 221 128 Op 1 4/0.342 + CDS 247734 - 248252 516 ## COG1247 Sortase and related acyltransferases 222 128 Op 2 . + CDS 248249 - 248698 507 ## COG3238 Uncharacterized protein conserved in bacteria + Term 248722 - 248761 1.4 223 129 Op 1 . - CDS 248702 - 248935 279 ## G2583_1807 hypothetical protein 224 129 Op 2 . - CDS 249010 - 250608 2027 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 250689 - 250748 3.6 + Prom 250582 - 250641 3.4 225 130 Op 1 . + CDS 250891 - 252222 1141 ## ECL_01858 ssrAB activated protein 226 130 Op 2 4/0.342 + CDS 252227 - 255208 3062 ## COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor 227 130 Op 3 . + CDS 255205 - 257379 1624 ## COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor 228 131 Op 1 . - CDS 257413 - 258171 251 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 258193 - 258252 4.8 229 131 Op 2 . - CDS 258258 - 258476 159 ## Ent638_2120 hypothetical protein - Prom 258524 - 258583 4.8 + Prom 258596 - 258655 4.2 230 132 Op 1 . + CDS 258675 - 259001 367 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 231 132 Op 2 . + CDS 259029 - 259382 424 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 232 132 Op 3 . + CDS 259386 - 259568 267 ## Ent638_2123 putative cytoplasmic protein 233 133 Tu 1 . - CDS 259604 - 261028 1192 ## COG1012 NAD-dependent aldehyde dehydrogenases 234 134 Op 1 . - CDS 261169 - 262593 1429 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 235 134 Op 2 . - CDS 262676 - 262864 155 ## ECL_01846 putative cold-shock protein - Prom 263089 - 263148 7.0 + Prom 263098 - 263157 8.8 236 135 Op 1 31/0.000 + CDS 263258 - 264652 1216 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 237 135 Op 2 . + CDS 264712 - 265668 752 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 + Term 265805 - 265837 1.5 + Prom 265829 - 265888 3.5 238 136 Tu 1 . + CDS 265920 - 266357 433 ## COG3187 Heat shock protein 239 137 Tu 1 . - CDS 266359 - 266625 176 ## COG3042 Putative hemolysin - Prom 266653 - 266712 2.9 + Prom 266770 - 266829 3.5 240 138 Tu 1 . + CDS 266894 - 270418 3267 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 270424 - 270456 3.0 + Prom 270657 - 270716 6.9 241 139 Tu 1 . + CDS 270807 - 271934 1441 ## COG3203 Outer membrane protein (porin) + Term 271939 - 271978 9.1 - Term 271868 - 271905 1.7 242 140 Op 1 . - CDS 271970 - 272392 264 ## COG3791 Uncharacterized conserved protein 243 140 Op 2 . - CDS 272396 - 272593 155 ## KP1_3238 hypothetical protein - Prom 272614 - 272673 2.2 244 141 Tu 1 . + CDS 273234 - 274169 1122 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 274177 - 274215 6.1 - Term 274158 - 274210 6.3 245 142 Op 1 . - CDS 274212 - 275585 1229 ## COG0513 Superfamily II DNA and RNA helicases 246 142 Op 2 . - CDS 275643 - 275966 147 ## 247 143 Tu 1 . - CDS 276071 - 276811 575 ## COG0598 Mg2+ and Co2+ transporters 248 144 Tu 1 . - CDS 277145 - 278275 843 ## COG0840 Methyl-accepting chemotaxis protein - Prom 278472 - 278531 6.6 - Term 278516 - 278564 9.9 249 145 Op 1 . - CDS 278594 - 279082 183 ## ECL_01822 hypothetical protein 250 145 Op 2 1/0.649 - CDS 279107 - 280438 1099 ## COG3515 Uncharacterized protein conserved in bacteria 251 145 Op 3 1/0.649 - CDS 280462 - 280917 480 ## COG3518 Uncharacterized protein conserved in bacteria 252 145 Op 4 1/0.649 - CDS 280917 - 281462 393 ## COG3521 Uncharacterized protein conserved in bacteria 253 145 Op 5 9/0.047 - CDS 281440 - 282525 832 ## COG3520 Uncharacterized protein conserved in bacteria 254 145 Op 6 . - CDS 282489 - 284243 1629 ## COG3519 Uncharacterized protein conserved in bacteria - Term 284521 - 284582 -0.4 255 146 Op 1 . - CDS 284749 - 286014 385 ## COG5529 Pyocin large subunit 256 146 Op 2 . - CDS 286048 - 286254 203 ## - Prom 286274 - 286333 4.0 - Term 286277 - 286319 -0.4 257 147 Tu 1 . - CDS 286338 - 286814 -96 ## KPN_01345 hypothetical protein - Prom 286904 - 286963 1.6 - Term 287461 - 287502 2.3 258 148 Op 1 . - CDS 287565 - 288845 323 ## COG5529 Pyocin large subunit 259 148 Op 2 5/0.212 - CDS 288878 - 290479 984 ## COG3515 Uncharacterized protein conserved in bacteria 260 148 Op 3 . - CDS 290479 - 293841 2690 ## COG3523 Uncharacterized protein conserved in bacteria - Prom 293863 - 293922 3.7 261 148 Op 4 . - CDS 293925 - 295133 611 ## PANA_4139 Hypothetical Protein - Prom 295178 - 295237 4.9 262 149 Op 1 . - CDS 296164 - 296649 -74 ## KP1_2403 hypothetical protein 263 149 Op 2 . - CDS 296682 - 298589 152 ## KP1_2402 hypothetical protein 264 149 Op 3 . - CDS 298558 - 299016 200 ## KP1_2401 hypothetical protein 265 149 Op 4 3/0.435 - CDS 299019 - 301799 2127 ## COG3501 Uncharacterized protein conserved in bacteria 266 149 Op 5 1/0.649 - CDS 301796 - 304441 1319 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Term 304569 - 304607 9.2 267 150 Op 1 1/0.649 - CDS 304611 - 305102 684 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 268 150 Op 2 1/0.649 - CDS 305108 - 306814 1173 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 269 150 Op 3 8/0.052 - CDS 306811 - 307500 674 ## COG3455 Uncharacterized protein conserved in bacteria 270 150 Op 4 1/0.649 - CDS 307497 - 308837 706 ## COG3522 Uncharacterized protein conserved in bacteria 271 150 Op 5 6/0.131 - CDS 308853 - 310388 2091 ## COG3517 Uncharacterized protein conserved in bacteria 272 150 Op 6 . - CDS 310429 - 310920 388 ## COG3516 Uncharacterized protein conserved in bacteria - Prom 311098 - 311157 6.9 273 151 Tu 1 . - CDS 311532 - 313148 1385 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 313182 - 313241 4.4 + Prom 313141 - 313200 2.9 274 152 Tu 1 . + CDS 313332 - 314045 189 ## COG2866 Predicted carboxypeptidase - Term 313974 - 314031 0.6 275 153 Tu 1 . - CDS 314036 - 315001 696 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 315079 - 315138 2.6 + Prom 315016 - 315075 4.5 276 154 Tu 1 . + CDS 315107 - 315613 616 ## COG2077 Peroxiredoxin + Term 315617 - 315658 8.3 - Term 315603 - 315646 4.3 277 155 Tu 1 . - CDS 315648 - 317189 1549 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism - Prom 317216 - 317275 4.0 278 156 Op 1 9/0.047 - CDS 317301 - 318353 1223 ## COG3768 Predicted membrane protein 279 156 Op 2 . - CDS 318350 - 319747 1156 ## COG3106 Predicted ATPase - Prom 319782 - 319841 4.8 + Prom 319813 - 319872 2.8 280 157 Tu 1 . + CDS 319903 - 320913 477 ## COG1609 Transcriptional regulators - Term 320904 - 320936 5.0 281 158 Op 1 . - CDS 320947 - 321861 1104 ## Ent638_2156 outer membrane protein G precursor - Term 321881 - 321914 3.1 282 158 Op 2 3/0.435 - CDS 321927 - 323009 1239 ## COG3839 ABC-type sugar transport systems, ATPase components 283 158 Op 3 11/0.023 - CDS 323023 - 323688 761 ## COG0637 Predicted phosphatase/phosphohexomutase 284 158 Op 4 4/0.342 - CDS 323678 - 325957 1946 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 285 158 Op 5 16/0.000 - CDS 325951 - 327006 892 ## COG0673 Predicted dehydrogenases and related proteins 286 158 Op 6 3/0.435 - CDS 327021 - 327809 1010 ## COG1082 Sugar phosphate isomerases/epimerases 287 158 Op 7 5/0.212 - CDS 327827 - 328879 1157 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 288 158 Op 8 38/0.000 - CDS 328908 - 329750 1009 ## COG0395 ABC-type sugar transport system, permease component 289 158 Op 9 35/0.000 - CDS 329737 - 330576 1086 ## COG1175 ABC-type sugar transport systems, permease components 290 158 Op 10 2/0.532 - CDS 330640 - 331932 1455 ## COG1653 ABC-type sugar transport system, periplasmic component 291 158 Op 11 . - CDS 331946 - 333643 939 ## COG0366 Glycosidases 292 159 Op 1 . - CDS 333839 - 334063 315 ## ECL_01779 phage shock protein D 293 159 Op 2 . - CDS 334076 - 334435 429 ## COG1983 Putative stress-responsive transcriptional regulator 294 159 Op 3 . - CDS 334435 - 334659 260 ## EFER_1657 phage shock protein B 295 159 Op 4 . - CDS 334709 - 335377 905 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Prom 335454 - 335513 4.2 + Prom 335453 - 335512 4.7 296 160 Op 1 2/0.532 + CDS 335544 - 336521 861 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Prom 336526 - 336585 2.5 297 160 Op 2 8/0.052 + CDS 336610 - 338250 1706 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 298 160 Op 3 8/0.052 + CDS 338247 - 339212 584 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 299 160 Op 4 8/0.052 + CDS 339199 - 340089 978 ## COG4171 ABC-type antimicrobial peptide transport system, permease component 300 160 Op 5 8/0.052 + CDS 340089 - 341081 472 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 301 160 Op 6 . + CDS 341071 - 341889 434 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 342008 - 342045 0.4 302 161 Tu 1 . - CDS 341886 - 342476 488 ## COG1309 Transcriptional regulator - Prom 342547 - 342606 4.5 + Prom 342270 - 342329 3.6 303 162 Tu 1 . + CDS 342554 - 343009 315 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 343153 - 343212 4.7 304 163 Tu 1 . + CDS 343295 - 344083 1062 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 344093 - 344126 4.7 + Prom 344107 - 344166 2.0 305 164 Op 1 1/0.649 + CDS 344231 - 345217 684 ## COG4950 Uncharacterized protein conserved in bacteria + Prom 345219 - 345278 2.2 306 164 Op 2 4/0.342 + CDS 345306 - 347240 1983 ## COG4776 Exoribonuclease II + Term 347253 - 347297 4.2 + Prom 347313 - 347372 4.2 307 165 Op 1 6/0.131 + CDS 347484 - 348902 1292 ## COG2199 FOG: GGDEF domain 308 165 Op 2 . + CDS 348877 - 349275 258 ## COG2200 FOG: EAL domain - Term 349177 - 349220 0.3 309 166 Tu 1 . - CDS 349272 - 350141 660 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 350253 - 350312 3.3 + Prom 350254 - 350313 4.2 310 167 Op 1 . + CDS 350333 - 350515 145 ## ECL_01752 hypothetical protein 311 167 Op 2 . + CDS 350583 - 351305 739 ## COG1349 Transcriptional regulators of sugar metabolism + Term 351488 - 351546 -0.3 + Prom 351362 - 351421 6.4 312 168 Tu 1 . + CDS 351568 - 351786 243 ## ECL_01750 osmotically inducible lipoprotein B + Term 351860 - 351897 7.2 - Term 351846 - 351883 7.2 313 169 Op 1 6/0.131 - CDS 351891 - 352217 394 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 314 169 Op 2 7/0.083 - CDS 352217 - 352954 614 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 353004 - 353063 4.5 315 170 Op 1 8/0.052 - CDS 353139 - 354308 1214 ## COG2956 Predicted N-acetylglucosaminyl transferase 316 170 Op 2 5/0.212 - CDS 354315 - 354623 206 ## PROTEIN SUPPORTED gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein - Prom 354688 - 354747 6.0 317 171 Tu 1 . - CDS 354772 - 355539 572 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 355561 - 355620 2.4 + Prom 355619 - 355678 2.2 318 172 Tu 1 . + CDS 355737 - 356327 717 ## COG0807 GTP cyclohydrolase II + Term 356336 - 356370 7.0 - Term 356319 - 356364 10.3 319 173 Tu 1 . - CDS 356365 - 359040 2743 ## COG1048 Aconitase A - Prom 359272 - 359331 5.7 - Term 359232 - 359266 -0.6 320 174 Op 1 . - CDS 359441 - 359605 73 ## ECL_01741 hypothetical protein 321 174 Op 2 . - CDS 359614 - 359742 63 ## EC55989_1434 hypothetical protein - Prom 359904 - 359963 5.2 - Term 359922 - 359974 3.2 322 175 Tu 1 . - CDS 360091 - 361065 918 ## COG0583 Transcriptional regulator - Prom 361179 - 361238 5.9 - Term 361189 - 361226 7.8 323 176 Tu 1 . - CDS 361252 - 363849 2894 ## COG0550 Topoisomerase IA - Prom 364087 - 364146 3.7 + Prom 364058 - 364117 3.5 324 177 Tu 1 . + CDS 364248 - 364499 329 ## ECL_01737 hypothetical protein + Term 364503 - 364543 6.3 - Term 364491 - 364533 9.2 325 178 Tu 1 . - CDS 364535 - 365581 1101 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 365746 - 365805 2.5 + Prom 365725 - 365784 4.8 326 179 Op 1 5/0.212 + CDS 365834 - 366595 598 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 327 179 Op 2 . + CDS 366592 - 367182 651 ## COG2109 ATP:corrinoid adenosyltransferase + Term 367191 - 367222 2.4 - Term 367174 - 367215 8.8 328 180 Tu 1 . - CDS 367218 - 368093 1028 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 368177 - 368236 5.5 + Prom 369728 - 369787 2.2 329 181 Op 1 . + CDS 369839 - 370306 204 ## 330 181 Op 2 . + CDS 370299 - 370733 188 ## 331 181 Op 3 . + CDS 370730 - 370915 115 ## 332 181 Op 4 . + CDS 370915 - 371070 97 ## 333 181 Op 5 . + CDS 371036 - 372265 411 ## Reut_A3313 hypothetical protein + Term 372273 - 372310 5.6 + Prom 372341 - 372400 2.4 334 182 Tu 1 . + CDS 372628 - 373044 255 ## + Prom 373082 - 373141 4.7 335 183 Tu 1 . + CDS 373180 - 373737 541 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 373976 - 374011 -0.3 - Term 373546 - 373572 -0.6 336 184 Tu 1 . - CDS 373636 - 373848 155 ## 337 185 Op 1 2/0.532 - CDS 373905 - 374330 173 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 338 185 Op 2 . - CDS 374346 - 375635 479 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases - Prom 375674 - 375733 2.5 339 186 Tu 1 . + CDS 376536 - 376793 85 ## COG0431 Predicted flavoprotein - Term 376665 - 376703 0.4 340 187 Tu 1 . - CDS 376850 - 378502 149 ## Shal_4066 integrase family protein - Term 378591 - 378617 1.0 341 188 Op 1 6/0.131 - CDS 378652 - 379272 831 ## COG0009 Putative translation factor (SUA5) 342 188 Op 2 . - CDS 379269 - 380162 614 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 380257 - 380316 5.0 + Prom 380203 - 380262 5.5 343 189 Op 1 10/0.036 + CDS 380428 - 381990 1818 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 344 189 Op 2 21/0.000 + CDS 381990 - 383585 1829 ## COG0547 Anthranilate phosphoribosyltransferase 345 189 Op 3 13/0.014 + CDS 383589 - 384947 1520 ## COG0134 Indole-3-glycerol phosphate synthase 346 189 Op 4 37/0.000 + CDS 384958 - 386151 1643 ## COG0133 Tryptophan synthase beta chain 347 189 Op 5 . + CDS 386151 - 386960 396 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 386970 - 387006 6.1 + Prom 387039 - 387098 3.5 348 190 Op 1 10/0.036 + CDS 387136 - 388347 1417 ## COG2391 Predicted transporter component 349 190 Op 2 . + CDS 388344 - 388577 304 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 388594 - 388622 1.4 + Prom 388902 - 388961 6.5 350 191 Tu 1 . + CDS 389000 - 389338 77 ## Kvar_2838 hypothetical protein + Term 389348 - 389378 5.0 351 192 Tu 1 . - CDS 389378 - 390010 734 ## COG3047 Outer membrane protein W - Prom 390040 - 390099 6.5 + Prom 390631 - 390690 3.7 352 193 Op 1 . + CDS 390723 - 391466 704 ## ECL_01650 hypothetical protein 353 193 Op 2 . + CDS 391480 - 392019 699 ## COG2917 Intracellular septation protein A + Term 392027 - 392063 9.6 + Prom 392112 - 392171 4.1 354 194 Op 1 . + CDS 392200 - 394386 2077 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 394390 - 394429 4.6 + Prom 394397 - 394456 2.8 355 194 Op 2 . + CDS 394485 - 394880 324 ## COG1607 Acyl-CoA hydrolase + Term 394898 - 394931 5.4 - Term 394886 - 394919 5.4 356 195 Tu 1 . - CDS 394922 - 395650 409 ## COG0810 Periplasmic protein TonB, links inner and outer membranes - Prom 395682 - 395741 6.2 + Prom 395759 - 395818 4.3 357 196 Tu 1 . + CDS 395872 - 396168 263 ## COG2350 Uncharacterized protein conserved in bacteria + Term 396172 - 396209 8.0 - Term 396150 - 396201 2.1 358 197 Op 1 . - CDS 396203 - 396838 648 ## COG1280 Putative threonine efflux protein - Term 396852 - 396892 9.1 359 197 Op 2 . - CDS 396906 - 397316 352 ## KP1_1473 hypothetical protein - Prom 397479 - 397538 4.7 + Prom 397804 - 397863 7.7 360 198 Op 1 1/0.649 + CDS 397891 - 399351 1673 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 361 198 Op 2 . + CDS 399385 - 399714 456 ## COG3099 Uncharacterized protein conserved in bacteria + Term 399715 - 399756 9.9 - Term 399703 - 399744 9.9 362 199 Op 1 1/0.649 - CDS 399746 - 400582 577 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Term 400586 - 400624 9.5 363 199 Op 2 44/0.000 - CDS 400628 - 401632 855 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 364 199 Op 3 44/0.000 - CDS 401629 - 402642 587 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 365 199 Op 4 49/0.000 - CDS 402654 - 403562 1193 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 366 199 Op 5 21/0.000 - CDS 403575 - 404495 869 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 404517 - 404576 1.7 - Term 404526 - 404576 10.7 367 199 Op 6 4/0.342 - CDS 404578 - 406209 1880 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Term 406921 - 406975 13.2 368 200 Tu 1 . - CDS 406979 - 407527 571 ## COG2095 Multiple antibiotic transporter - Prom 407578 - 407637 6.2 369 201 Tu 1 . + CDS 408107 - 410788 2666 ## COG1454 Alcohol dehydrogenase, class IV + Term 410808 - 410836 2.1 - Term 410794 - 410822 2.1 370 202 Tu 1 . - CDS 410858 - 411472 462 ## COG1435 Thymidine kinase + Prom 411347 - 411406 1.6 371 203 Tu 1 . + CDS 411509 - 411769 107 ## + Prom 411873 - 411932 7.7 372 204 Tu 1 . + CDS 412023 - 412436 516 ## COG2916 DNA-binding protein H-NS + Term 412451 - 412490 3.4 - Term 412572 - 412622 11.3 373 205 Tu 1 . - CDS 412640 - 413545 900 ## COG1210 UDP-glucose pyrophosphorylase - Prom 413679 - 413738 3.6 - Term 413666 - 413698 -1.0 374 206 Tu 1 4/0.342 - CDS 413745 - 414758 521 ## COG0784 FOG: CheY-like receiver 375 207 Tu 1 . - CDS 414848 - 415663 394 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Prom 415760 - 415819 3.8 376 208 Op 1 4/0.342 + CDS 415864 - 416328 216 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 377 208 Op 2 . + CDS 416370 - 417212 1117 ## COG0788 Formyltetrahydrofolate hydrolase + TRNA 417370 - 417454 66.9 # Tyr GTA 0 0 + TRNA 417490 - 417574 66.9 # Tyr GTA 0 0 - Term 417910 - 417949 3.0 378 209 Op 1 12/0.016 - CDS 417961 - 418638 1009 ## COG2181 Nitrate reductase gamma subunit 379 209 Op 2 12/0.016 - CDS 418638 - 419348 889 ## COG2180 Nitrate reductase delta subunit 380 209 Op 3 13/0.014 - CDS 419345 - 420880 1897 ## COG1140 Nitrate reductase beta subunit 381 209 Op 4 10/0.036 - CDS 420877 - 424620 4682 ## COG5013 Nitrate reductase alpha subunit - Prom 424806 - 424865 10.7 - Term 424955 - 424986 3.1 382 210 Tu 1 . - CDS 425003 - 426400 1545 ## COG2223 Nitrate/nitrite transporter - Prom 426506 - 426565 2.1 + Prom 426593 - 426652 3.9 383 211 Op 1 8/0.052 + CDS 426710 - 428506 1365 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 384 211 Op 2 . + CDS 428499 - 429149 836 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 429051 - 429081 0.4 385 212 Tu 1 . - CDS 429151 - 430569 1256 ## ECL_01618 hypothetical protein - Prom 430594 - 430653 2.3 - Term 430654 - 430714 9.0 386 213 Op 1 2/0.532 - CDS 430727 - 433204 1947 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 387 213 Op 2 1/0.649 - CDS 433201 - 437187 4292 ## COG1251 NAD(P)H-nitrite reductase 388 213 Op 3 24/0.000 - CDS 437200 - 437988 221 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 389 213 Op 4 21/0.000 - CDS 437998 - 438876 1121 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 390 213 Op 5 4/0.342 - CDS 438879 - 440126 1298 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Term 440144 - 440187 8.2 391 214 Tu 1 . - CDS 440355 - 441527 1223 ## COG3707 Response regulator with putative antiterminator output domain + Prom 441500 - 441559 2.3 392 215 Tu 1 . + CDS 441601 - 441954 516 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 393 216 Tu 1 . + CDS 442061 - 443845 1726 ## COG0840 Methyl-accepting chemotaxis protein + Term 443888 - 443923 -1.0 + Prom 443871 - 443930 4.7 394 217 Tu 1 . + CDS 444040 - 444279 224 ## ECL_01607 hypothetical protein + Term 444283 - 444319 5.2 - Term 444269 - 444309 6.3 395 218 Tu 1 . - CDS 444310 - 444984 685 ## COG3703 Uncharacterized protein involved in cation transport - Prom 445069 - 445128 4.4 396 219 Tu 1 . - CDS 445183 - 445413 320 ## COG4572 Putative cation transport regulator - Prom 445559 - 445618 5.0 + Prom 445599 - 445658 5.4 397 220 Tu 1 . + CDS 445681 - 446781 1264 ## COG0387 Ca2+/H+ antiporter + Term 446868 - 446908 5.8 - Term 446864 - 446889 -0.5 398 221 Op 1 8/0.052 - CDS 446897 - 447751 1279 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 399 221 Op 2 6/0.131 - CDS 447788 - 448597 1018 ## COG2912 Uncharacterized conserved protein 400 221 Op 3 6/0.131 - CDS 448601 - 448813 190 ## COG3094 Uncharacterized protein conserved in bacteria 401 221 Op 4 32/0.000 - CDS 448810 - 449640 467 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 402 221 Op 5 9/0.047 - CDS 449640 - 450722 1238 ## COG0216 Protein chain release factor A 403 221 Op 6 . - CDS 450764 - 452020 1465 ## COG0373 Glutamyl-tRNA reductase - Prom 452134 - 452193 4.5 + Prom 451998 - 452057 3.4 404 222 Op 1 13/0.014 + CDS 452222 - 452833 837 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 405 222 Op 2 13/0.014 + CDS 452830 - 453699 744 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 406 223 Tu 1 . + CDS 453834 - 454772 938 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 454784 - 454824 7.1 + Prom 454783 - 454842 3.4 407 224 Tu 1 . + CDS 455038 - 456576 1777 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 456661 - 456712 -0.2 408 225 Tu 1 . - CDS 456562 - 457620 1118 ## COG0789 Predicted transcriptional regulators - Prom 457657 - 457716 3.4 - Term 457685 - 457722 5.7 409 226 Tu 1 . - CDS 457741 - 458016 220 ## ECL_01590 hypothetical protein - Prom 458067 - 458126 5.2 + Prom 458203 - 458262 3.7 410 227 Tu 1 14/0.011 + CDS 458291 - 458875 524 ## COG0193 Peptidyl-tRNA hydrolase + Prom 458911 - 458970 3.5 411 228 Tu 1 . + CDS 459002 - 460021 1366 ## COG0012 Predicted GTPase, probable translation factor 412 229 Tu 1 . - CDS 461395 - 462351 666 ## COG3209 Rhs family protein - Prom 462555 - 462614 80.3 413 230 Tu 1 . - CDS 463001 - 463261 73 ## Ctu_00940 hypothetical protein - Prom 463308 - 463367 2.8 414 231 Tu 1 . - CDS 463407 - 463850 143 ## ECL_01571 hypothetical protein - Prom 463872 - 463931 5.3 415 232 Tu 1 . - CDS 464457 - 465344 512 ## COG3209 Rhs family protein - Prom 465396 - 465455 80.4 416 233 Op 1 . - CDS 465931 - 469200 3337 ## COG3209 Rhs family protein 417 233 Op 2 . - CDS 469204 - 469644 567 ## ECL_01566 hypothetical protein - Prom 469665 - 469724 8.3 418 234 Op 1 . - CDS 469852 - 470289 66 ## Ctu_00920 hypothetical protein 419 234 Op 2 . - CDS 470360 - 472942 2130 ## COG3501 Uncharacterized protein conserved in bacteria - Prom 473055 - 473114 6.4 420 235 Tu 1 . - CDS 473116 - 473550 126 ## EAM_0596 membrane protein - Prom 473630 - 473689 4.5 - Term 473647 - 473686 -0.5 421 236 Tu 1 . - CDS 473714 - 475348 262 ## COG3209 Rhs family protein - Term 476027 - 476078 1.2 422 237 Op 1 . - CDS 476160 - 476609 117 ## ECL_01556 hypothetical protein 423 237 Op 2 . - CDS 476623 - 477369 571 ## ESA_03918 hypothetical protein 424 237 Op 3 . - CDS 477381 - 478847 1252 ## ECL_01553 hypothetical protein 425 237 Op 4 . - CDS 478873 - 480306 1564 ## COG0515 Serine/threonine protein kinase 426 237 Op 5 3/0.435 - CDS 480331 - 482946 1294 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 427 237 Op 6 9/0.047 - CDS 482985 - 484028 1050 ## COG3520 Uncharacterized protein conserved in bacteria 428 237 Op 7 8/0.052 - CDS 484025 - 485896 2190 ## COG3519 Uncharacterized protein conserved in bacteria 429 237 Op 8 3/0.435 - CDS 485899 - 486462 669 ## COG3518 Uncharacterized protein conserved in bacteria 430 237 Op 9 . - CDS 486455 - 487267 1017 ## COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion 431 237 Op 10 . - CDS 487277 - 488269 1084 ## ECL_01546 hypothetical protein 432 237 Op 11 . - CDS 488286 - 489083 843 ## COG0631 Serine/threonine protein phosphatase 433 237 Op 12 . - CDS 489080 - 490849 1872 ## COG3456 Uncharacterized conserved protein, contains FHA domain - Prom 490995 - 491054 3.9 434 238 Op 1 . - CDS 491362 - 492351 179 ## EAMY_3318 hypothetical protein 435 238 Op 2 . - CDS 492394 - 492747 207 ## ECL_01543 hypothetical protein 436 238 Op 3 . - CDS 492744 - 493226 205 ## ECL_01542 putative cytoplasmic protein - Term 493248 - 493279 3.2 437 238 Op 4 . - CDS 493285 - 493767 552 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 493981 - 494040 4.6 + Prom 493663 - 493722 2.2 438 239 Tu 1 . + CDS 493835 - 494056 67 ## 439 240 Op 1 6/0.131 - CDS 494142 - 495641 2191 ## COG3517 Uncharacterized protein conserved in bacteria 440 240 Op 2 3/0.435 - CDS 495645 - 496169 770 ## COG3516 Uncharacterized protein conserved in bacteria 441 240 Op 3 . - CDS 496245 - 497261 1113 ## COG3515 Uncharacterized protein conserved in bacteria 442 240 Op 4 3/0.435 - CDS 497273 - 497989 706 ## COG3913 Uncharacterized protein conserved in bacteria 443 240 Op 5 3/0.435 - CDS 498006 - 501626 4346 ## COG3523 Uncharacterized protein conserved in bacteria 444 240 Op 6 8/0.052 - CDS 501629 - 502867 1442 ## COG3455 Uncharacterized protein conserved in bacteria 445 240 Op 7 8/0.052 - CDS 502885 - 504228 1339 ## COG3522 Uncharacterized protein conserved in bacteria 446 240 Op 8 . - CDS 504257 - 504736 303 ## COG3521 Uncharacterized protein conserved in bacteria 447 240 Op 9 . - CDS 504784 - 505278 494 ## ECL_01532 hypothetical protein - Prom 505332 - 505391 4.7 448 241 Op 1 . + CDS 506137 - 507117 988 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 449 241 Op 2 . + CDS 507196 - 508206 1335 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Term 508243 - 508278 4.5 450 242 Tu 1 . - CDS 508294 - 509631 1220 ## ECL_01523 putative glycoporin - Prom 509729 - 509788 4.7 + Prom 509900 - 509959 2.2 451 243 Tu 1 . + CDS 510084 - 511751 1800 ## COG1626 Neutral trehalase + Term 511812 - 511848 10.3 - Term 511797 - 511836 7.9 452 244 Tu 1 . - CDS 511842 - 513944 2379 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 513975 - 514034 3.1 + Prom 513940 - 513999 5.8 453 245 Tu 1 . + CDS 514105 - 514836 760 ## COG5581 Predicted glycosyltransferase + Term 514935 - 514980 2.1 454 246 Tu 1 . - CDS 514876 - 515379 581 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 515547 - 515606 2.6 + Prom 515506 - 515565 3.5 455 247 Tu 1 . + CDS 515595 - 516509 1106 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Prom 516609 - 516668 4.2 456 248 Tu 1 . + CDS 516733 - 518340 2006 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 457 249 Op 1 7/0.083 - CDS 518389 - 519459 1322 ## COG0787 Alanine racemase 458 249 Op 2 . - CDS 519469 - 520767 1399 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 520804 - 520863 4.9 + Prom 520784 - 520843 3.5 459 250 Tu 1 . + CDS 521089 - 522621 2139 ## COG2719 Uncharacterized conserved protein + Term 522660 - 522703 4.3 - Term 522657 - 522684 0.1 460 251 Tu 1 . - CDS 522694 - 523413 815 ## COG2186 Transcriptional regulators - Prom 523521 - 523580 6.6 + Prom 523526 - 523585 3.8 461 252 Op 1 6/0.131 + CDS 523785 - 525155 1508 ## COG3067 Na+/H+ antiporter 462 252 Op 2 . + CDS 525202 - 525732 599 ## COG1495 Disulfide bond formation protein DsbB + Term 525858 - 525883 -0.5 - Term 525797 - 525859 28.5 463 253 Op 1 1/0.649 - CDS 525882 - 526322 613 ## COG2983 Uncharacterized conserved protein - Prom 526347 - 526406 3.4 464 253 Op 2 2/0.532 - CDS 526416 - 527075 941 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 465 253 Op 3 . - CDS 527123 - 527398 390 ## COG3100 Uncharacterized protein conserved in bacteria - Prom 527440 - 527499 2.8 + Prom 527404 - 527463 4.2 466 254 Op 1 22/0.000 + CDS 527522 - 528229 320 ## COG0850 Septum formation inhibitor 467 254 Op 2 22/0.000 + CDS 528252 - 529064 1145 ## COG2894 Septum formation inhibitor-activating ATPase 468 254 Op 3 . + CDS 529068 - 529334 407 ## COG0851 Septum formation topological specificity factor + Term 529388 - 529431 3.1 469 255 Op 1 8/0.052 - CDS 529424 - 530578 1583 ## COG0349 Ribonuclease D 470 255 Op 2 7/0.083 - CDS 530623 - 532341 1912 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 532365 - 532424 4.7 - Term 532449 - 532494 12.4 471 256 Op 1 7/0.083 - CDS 532512 - 533093 624 ## COG3065 Starvation-inducible outer membrane lipoprotein 472 256 Op 2 8/0.052 - CDS 533131 - 533826 860 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 473 256 Op 3 . - CDS 533893 - 535803 2081 ## COG1199 Rad3-related DNA helicases - Prom 535910 - 535969 1.7 + Prom 535772 - 535831 2.0 474 257 Tu 1 . + CDS 535937 - 536281 441 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 536312 - 536360 10.0 - Term 536095 - 536129 -1.0 475 258 Tu 1 . - CDS 536287 - 536469 221 ## COG3140 Uncharacterized protein conserved in bacteria - Prom 536500 - 536559 4.5 + Prom 536436 - 536495 4.7 476 259 Op 1 6/0.131 + CDS 536522 - 537865 1309 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 477 259 Op 2 5/0.212 + CDS 537862 - 538440 529 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 538531 - 538590 4.8 478 260 Tu 1 . + CDS 538643 - 539989 1692 ## COG1760 L-serine deaminase + Term 539998 - 540036 9.3 479 261 Tu 1 . + CDS 540119 - 541717 1099 ## COG2200 FOG: EAL domain + Term 541883 - 541925 1.8 - Term 541549 - 541588 1.0 480 262 Tu 1 . - CDS 541724 - 543283 2094 ## COG1253 Hemolysins and related proteins containing CBS domains + Prom 543573 - 543632 6.5 481 263 Op 1 13/0.014 + CDS 543746 - 544708 1034 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 482 263 Op 2 13/0.014 + CDS 544756 - 545556 1010 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 483 263 Op 3 4/0.342 + CDS 545569 - 546420 1206 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 546435 - 546469 7.0 484 263 Op 4 4/0.342 + CDS 546475 - 546933 301 ## COG4811 Predicted membrane protein + Term 546946 - 547008 7.2 485 264 Tu 1 . + CDS 547306 - 547899 712 ## COG1971 Predicted membrane protein 486 265 Op 1 2/0.532 - CDS 547896 - 548711 605 ## COG0500 SAM-dependent methyltransferases 487 265 Op 2 1/0.649 - CDS 548751 - 550343 1288 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Term 550634 - 550664 2.1 488 266 Tu 1 . - CDS 550713 - 550922 242 ## COG1278 Cold shock proteins - Prom 550995 - 551054 3.6 - Term 551559 - 551613 -0.5 489 267 Tu 1 . - CDS 551748 - 552032 357 ## Ent638_2394 hypothetical protein + Prom 552218 - 552277 3.0 490 268 Tu 1 . + CDS 552411 - 552650 212 ## Ent638_2396 hypothetical protein + Term 552677 - 552707 3.0 - Term 552664 - 552694 3.0 491 269 Tu 1 . - CDS 552713 - 553504 938 ## COG1414 Transcriptional regulator - Prom 553544 - 553603 8.2 + Prom 553503 - 553562 6.7 492 270 Tu 1 . + CDS 553683 - 555056 1247 ## COG0477 Permeases of the major facilitator superfamily + Term 555062 - 555100 6.1 - Term 555049 - 555087 8.1 493 271 Tu 1 . - CDS 555108 - 555989 1107 ## COG0501 Zn-dependent protease with chaperone function - Prom 556094 - 556153 3.5 - Term 556139 - 556174 5.1 494 272 Op 1 7/0.083 - CDS 556183 - 558231 2181 ## COG0793 Periplasmic protease 495 272 Op 2 4/0.342 - CDS 558251 - 558937 604 ## COG3109 Activator of osmoprotectant transporter ProP 496 272 Op 3 . - CDS 559034 - 559531 304 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 - Prom 559620 - 559679 4.1 497 273 Op 1 11/0.023 + CDS 559877 - 560947 928 ## COG2995 Uncharacterized paraquat-inducible protein A 498 273 Op 2 4/0.342 + CDS 560916 - 563549 3006 ## COG3008 Paraquat-inducible protein B + Term 563557 - 563596 8.0 499 274 Tu 1 . + CDS 563672 - 565069 1392 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Term 565123 - 565158 0.0 + Prom 565071 - 565130 1.9 500 275 Tu 1 . + CDS 565175 - 565414 256 ## ECL_01465 hypothetical protein + Term 565421 - 565458 2.4 - Term 565414 - 565441 1.5 501 276 Tu 1 . - CDS 565449 - 566093 674 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Prom 566246 - 566305 3.4 + Prom 566180 - 566239 4.1 502 277 Tu 1 . + CDS 566261 - 567241 675 ## COG2990 Uncharacterized protein conserved in bacteria - Term 567545 - 567584 5.2 503 278 Op 1 . - CDS 567609 - 567947 296 ## ECL_01457 hypothetical protein 504 278 Op 2 8/0.052 - CDS 567965 - 568834 803 ## COG1276 Putative copper export protein 505 278 Op 3 . - CDS 568836 - 569207 479 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC - Prom 569236 - 569295 5.6 + Prom 569208 - 569267 5.8 506 279 Tu 1 . + CDS 569345 - 569575 342 ## ECL_01454 DNA polymerase III subunit theta + Term 569763 - 569811 -0.8 507 280 Op 1 4/0.342 + CDS 569917 - 570336 181 ## COG0388 Predicted amidohydrolase 508 280 Op 2 . + CDS 570361 - 571023 771 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Term 570808 - 570836 -1.0 509 281 Op 1 4/0.342 - CDS 571005 - 573080 2316 ## COG1770 Protease II 510 281 Op 2 . - CDS 573156 - 573806 820 ## COG2979 Uncharacterized protein conserved in bacteria - Prom 573936 - 573995 2.4 + Prom 573899 - 573958 3.0 511 282 Tu 1 . + CDS 573979 - 575157 1196 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) - Term 575155 - 575190 7.4 512 283 Op 1 . - CDS 575230 - 576612 511 ## Pat9b_5147 hypothetical protein 513 283 Op 2 . - CDS 576612 - 576869 143 ## Rahaq_4803 hypothetical protein - Prom 577014 - 577073 80.3 514 284 Op 1 . - CDS 578074 - 580188 1292 ## Pat9b_2903 hypothetical protein 515 284 Op 2 . - CDS 580185 - 582698 1369 ## COG3501 Uncharacterized protein conserved in bacteria - Prom 582792 - 582851 8.0 - Term 582997 - 583043 1.3 516 285 Op 1 8/0.052 - CDS 583078 - 583719 913 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 517 285 Op 2 4/0.342 - CDS 583759 - 585570 2118 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 585677 - 585736 6.4 - Term 585686 - 585724 6.0 518 286 Tu 1 . - CDS 585805 - 587280 1960 ## COG0364 Glucose-6-phosphate 1-dehydrogenase - Prom 587338 - 587397 2.9 519 287 Tu 1 . + CDS 587637 - 588506 710 ## COG1737 Transcriptional regulators + Prom 588529 - 588588 2.4 520 288 Tu 1 . + CDS 588621 - 590063 1698 ## COG0469 Pyruvate kinase + Term 590071 - 590113 7.7 - Term 590054 - 590100 9.4 521 289 Tu 1 1/0.649 - CDS 590107 - 590973 871 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 591111 - 591170 3.9 - Term 591141 - 591176 5.0 522 290 Op 1 . - CDS 591195 - 592451 1418 ## COG0739 Membrane proteins related to metalloendopeptidases 523 290 Op 2 . - CDS 592530 - 593474 585 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin - Prom 593507 - 593566 6.2 524 291 Op 1 42/0.000 + CDS 593552 - 594307 235 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 525 291 Op 2 . + CDS 594304 - 595089 1012 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Term 595144 - 595180 -0.9 526 292 Op 1 29/0.000 - CDS 595338 - 596348 1438 ## COG2255 Holliday junction resolvasome, helicase subunit 527 292 Op 2 14/0.011 - CDS 596357 - 596971 699 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Term 597010 - 597041 3.4 528 293 Op 1 8/0.052 - CDS 597052 - 597573 609 ## COG0817 Holliday junction resolvasome, endonuclease subunit 529 293 Op 2 7/0.083 - CDS 597608 - 598348 964 ## COG0217 Uncharacterized conserved protein 530 293 Op 3 5/0.212 - CDS 598376 - 598819 492 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 531 293 Op 4 . - CDS 598821 - 600593 2511 ## COG0173 Aspartyl-tRNA synthetase - Prom 600686 - 600745 5.1 + Prom 600737 - 600796 5.4 532 294 Tu 1 . + CDS 600858 - 601424 650 ## COG1335 Amidases related to nicotinamidase + Term 601469 - 601514 -0.4 + Prom 601702 - 601761 3.7 533 295 Tu 1 . + CDS 601789 - 602055 217 ## ECL_02708 virulence protein MsgA + Term 602112 - 602158 5.2 - Term 602096 - 602141 3.7 534 296 Tu 1 . - CDS 602151 - 602267 58 ## - Prom 602296 - 602355 43.0 535 297 Op 1 . - CDS 603280 - 604200 348 ## ECL_01716 hypothetical protein 536 297 Op 2 5/0.212 - CDS 604247 - 608074 2771 ## COG4733 Phage-related protein, tail component - Term 608078 - 608109 2.3 537 298 Op 1 6/0.131 - CDS 608125 - 608712 595 ## COG4723 Phage-related protein, tail component 538 298 Op 2 6/0.131 - CDS 608712 - 609422 654 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 539 298 Op 3 1/0.649 - CDS 609425 - 610183 599 ## COG4672 Phage-related protein 540 299 Op 1 . - CDS 610521 - 612977 1209 ## COG5281 Phage-related minor tail protein - Term 612982 - 613010 2.1 541 299 Op 2 . - CDS 613015 - 613479 141 ## gi|262044695|ref|ZP_06017747.1| conserved hypothetical protein - Prom 613512 - 613571 3.5 542 300 Op 1 . - CDS 613692 - 614177 93 ## PLES_25531 hypothetical protein 543 300 Op 2 . - CDS 614180 - 614677 371 ## PLES_25521 hypothetical protein - Term 614690 - 614716 -0.7 544 300 Op 3 . - CDS 614725 - 615090 483 ## PputW619_1344 hypothetical protein 545 300 Op 4 . - CDS 615087 - 615572 245 ## Pput_4109 HK97 family phage protein 546 300 Op 5 . - CDS 615565 - 615897 201 ## COG5614 Bacteriophage head-tail adaptor 547 301 Op 1 . - CDS 616140 - 616445 220 ## PputW619_3941 phage protein 548 301 Op 2 . - CDS 616414 - 616626 248 ## 549 301 Op 3 . - CDS 616684 - 617847 1340 ## PMI0927 major capsid protein 550 301 Op 4 3/0.435 - CDS 617859 - 618539 611 ## COG3740 Phage head maturation protease 551 301 Op 5 2/0.532 - CDS 618545 - 619816 874 ## COG4695 Phage-related protein 552 301 Op 6 . - CDS 619819 - 621351 1261 ## COG4626 Phage terminase-like protein, large subunit 553 301 Op 7 . - CDS 621361 - 621795 248 ## Aave_1767 hypothetical protein 554 302 Op 1 . - CDS 621920 - 622129 217 ## 555 302 Op 2 . - CDS 622142 - 622432 177 ## COG1403 Restriction endonuclease 556 302 Op 3 . - CDS 622444 - 623280 624 ## + Prom 623410 - 623469 2.4 557 303 Tu 1 . + CDS 623543 - 624007 146 ## gi|330958084|gb|EGH58344.1| hypothetical protein PMA4326_05835 + Term 624040 - 624076 -1.0 - Term 624237 - 624275 -0.2 558 304 Op 1 . - CDS 624289 - 624975 644 ## COG3646 Uncharacterized phage-encoded protein - Term 625121 - 625154 2.9 559 304 Op 2 . - CDS 625173 - 625478 252 ## ECL_03207 bacteriophage lysis protein - Prom 625541 - 625600 80.4 - TRNA 626637 - 626711 64.7 # Lys TTT 0 0 - Term 626707 - 626746 5.1 560 305 Op 1 . - CDS 626857 - 627639 424 ## SeSA_A0683 GP23 561 305 Op 2 . - CDS 627643 - 629514 1048 ## XNC1_3413 hypothetical protein - Prom 629534 - 629593 1.8 562 306 Op 1 . - CDS 629622 - 630605 414 ## ECO103_2104 putative replication protein O 563 306 Op 2 . - CDS 630551 - 630748 129 ## gi|300918424|ref|ZP_07135022.1| conserved hypothetical protein 564 306 Op 3 . - CDS 630750 - 630980 98 ## ECO26_1585 putative antirepressor protein Cro - Prom 631003 - 631062 5.2 + Prom 630949 - 631008 4.7 565 307 Tu 1 . + CDS 631096 - 631815 361 ## COG2932 Predicted transcriptional regulator + Term 631835 - 631861 -1.0 + Prom 631829 - 631888 8.1 566 308 Op 1 . + CDS 631991 - 632422 146 ## 567 308 Op 2 . + CDS 632489 - 632875 123 ## gi|206601813|gb|EDZ38296.1| putative phage repressor + Term 632927 - 632959 2.4 568 309 Op 1 . + CDS 632982 - 633206 93 ## ECL_02714 hypothetical protein 569 309 Op 2 . + CDS 633199 - 633606 163 ## ECL_02715 hypothetical protein 570 309 Op 3 . + CDS 633578 - 633796 138 ## ECO103_2117 hypothetical protein 571 309 Op 4 . + CDS 633793 - 634299 476 ## XBJ1_3983 hypothetical protein 572 309 Op 5 . + CDS 634312 - 635172 765 ## HDEF_0921 hypothetical protein 573 310 Op 1 . + CDS 635629 - 635844 154 ## gi|262043824|ref|ZP_06016915.1| conserved hypothetical protein 574 310 Op 2 . + CDS 635844 - 636197 225 ## ECL_02719 hypothetical protein 575 310 Op 3 . + CDS 636190 - 636522 115 ## XBJ1_3990 hypothetical protein 576 310 Op 4 . + CDS 636585 - 636821 125 ## ECO103_2126 putative excisionase 577 310 Op 5 . + CDS 636877 - 638190 280 ## COG0582 Integrase + Prom 638262 - 638321 1.9 578 311 Op 1 2/0.532 + CDS 638385 - 638942 470 ## COG1801 Uncharacterized conserved protein 579 311 Op 2 2/0.532 + CDS 638994 - 639389 383 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 580 311 Op 3 17/0.000 + CDS 639430 - 640173 873 ## COG0500 SAM-dependent methyltransferases 581 311 Op 4 . + CDS 640170 - 641141 1270 ## COG0500 SAM-dependent methyltransferases - Term 641363 - 641398 2.0 582 312 Op 1 3/0.435 - CDS 641420 - 642163 442 ## COG3142 Uncharacterized protein involved in copper resistance 583 312 Op 2 . - CDS 642242 - 642802 521 ## COG3102 Uncharacterized protein conserved in bacteria - Prom 642961 - 643020 2.5 + Prom 642944 - 643003 4.3 584 313 Tu 1 . + CDS 643042 - 644775 2339 ## COG0018 Arginyl-tRNA synthetase + Term 644782 - 644807 -0.5 - Term 644770 - 644795 -0.5 585 314 Op 1 . - CDS 644807 - 645946 1354 ## COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 586 314 Op 2 . - CDS 645951 - 647534 1926 ## COG2211 Na+/melibiose symporter and related transporters - Prom 647695 - 647754 4.6 587 315 Op 1 . - CDS 647796 - 648188 398 ## ROD_19231 flagellar protein FlhE 588 315 Op 2 13/0.014 - CDS 648188 - 650266 2669 ## COG1298 Flagellar biosynthesis pathway, component FlhA 589 315 Op 3 4/0.342 - CDS 650259 - 651407 956 ## COG1377 Flagellar biosynthesis pathway, component FlhB - Prom 651433 - 651492 3.3 590 316 Op 1 8/0.052 - CDS 651558 - 652202 961 ## COG3143 Chemotaxis protein 591 316 Op 2 18/0.000 - CDS 652213 - 652602 636 ## COG0784 FOG: CheY-like receiver 592 316 Op 3 13/0.014 - CDS 652620 - 653669 991 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 593 316 Op 4 9/0.047 - CDS 653666 - 654487 927 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 594 316 Op 5 13/0.014 - CDS 654552 - 656153 1561 ## COG0840 Methyl-accepting chemotaxis protein 595 316 Op 6 . - CDS 656198 - 657865 1652 ## COG0840 Methyl-accepting chemotaxis protein 596 316 Op 7 5/0.212 - CDS 657951 - 658670 669 ## COG5430 Uncharacterized secreted protein 597 316 Op 8 10/0.036 - CDS 658753 - 661284 2292 ## COG3188 P pilus assembly protein, porin PapC 598 316 Op 9 . - CDS 661260 - 662021 685 ## COG3121 P pilus assembly protein, chaperone PapD 599 316 Op 10 . - CDS 662038 - 662586 300 ## ECL_01408 spore coat U domain-containing protein 600 316 Op 11 . - CDS 662594 - 663166 557 ## EFER_1135 type I pilus protein CsuA/B + Prom 663398 - 663457 6.6 601 317 Tu 1 . + CDS 663637 - 664854 1657 ## COG1301 Na+/H+-dicarboxylate symporters + Term 664918 - 664957 -1.0 - Term 664852 - 664897 7.3 602 318 Op 1 20/0.000 - CDS 664951 - 665454 707 ## COG0835 Chemotaxis signal transduction protein 603 318 Op 2 5/0.212 - CDS 665474 - 667483 2302 ## COG0643 Chemotaxis protein histidine kinase and related kinases 604 318 Op 3 19/0.000 - CDS 667494 - 668423 906 ## COG1360 Flagellar motor protein 605 318 Op 4 . - CDS 668420 - 669250 1103 ## COG1291 Flagellar motor component - Prom 669322 - 669381 1.8 - Term 669369 - 669406 7.1 606 319 Op 1 . - CDS 669431 - 670009 438 ## ECL_01401 hypothetical protein 607 319 Op 2 . - CDS 670012 - 670371 334 ## ECL_01400 transcriptional activator FlhD - Prom 670619 - 670678 5.2 + Prom 670987 - 671046 8.7 608 320 Tu 1 . + CDS 671159 - 671587 398 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Term 671418 - 671454 -0.4 609 321 Op 1 8/0.052 - CDS 671603 - 673027 1535 ## COG0380 Trehalose-6-phosphate synthase 610 321 Op 2 1/0.649 - CDS 673002 - 673805 498 ## COG1877 Trehalose-6-phosphatase - Prom 673835 - 673894 3.7 - Term 673866 - 673906 8.0 611 322 Op 1 21/0.000 - CDS 673959 - 674939 1179 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 612 322 Op 2 16/0.000 - CDS 674954 - 676468 185 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 613 322 Op 3 1/0.649 - CDS 676540 - 677529 1431 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 677729 - 677788 4.3 - Term 677794 - 677843 1.1 614 323 Tu 1 . - CDS 677846 - 678403 584 ## COG0693 Putative intracellular protease/amidase - Prom 678621 - 678680 6.4 615 324 Tu 1 . + CDS 678907 - 679410 442 ## COG1528 Ferritin-like protein + Term 679431 - 679468 5.2 + Prom 679463 - 679522 2.4 616 325 Tu 1 . + CDS 679552 - 680895 1542 ## COG2704 Anaerobic C4-dicarboxylate transporter 617 326 Tu 1 . - CDS 680976 - 681227 386 ## Ent638_2480 hypothetical protein - Prom 681247 - 681306 2.4 - Term 681293 - 681334 2.3 618 327 Tu 1 . - CDS 681335 - 681418 74 ## - Prom 681460 - 681519 4.9 + Prom 681419 - 681478 4.1 619 328 Tu 1 . + CDS 681633 - 683051 1364 ## COG0477 Permeases of the major facilitator superfamily - Term 683040 - 683091 5.3 620 329 Tu 1 . - CDS 683094 - 683732 782 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 683826 - 683885 4.4 + Prom 683790 - 683849 3.2 621 330 Tu 1 . + CDS 683979 - 684317 280 ## ECL_01387 putative lipoprotein + Term 684322 - 684356 4.4 + Prom 684439 - 684498 59.1 622 331 Op 1 . + CDS 684558 - 685055 660 ## COG1528 Ferritin-like protein + Term 685059 - 685102 12.4 + Prom 685253 - 685312 3.3 623 331 Op 2 . + CDS 685419 - 686561 1401 ## COG0814 Amino acid permeases + Term 686615 - 686645 5.7 - Term 686603 - 686633 5.7 624 332 Tu 1 . - CDS 686719 - 687387 886 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA - Prom 687407 - 687466 4.7 + Prom 687491 - 687550 5.0 625 333 Op 1 20/0.000 + CDS 687799 - 688920 1459 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component + Term 688936 - 688979 5.2 626 333 Op 2 24/0.000 + CDS 688989 - 689903 1210 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 627 333 Op 3 19/0.000 + CDS 689915 - 691189 1393 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 628 333 Op 4 18/0.000 + CDS 691186 - 692061 241 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 629 333 Op 5 . + CDS 692070 - 692774 254 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 692783 - 692842 1.8 630 334 Tu 1 . + CDS 692918 - 693397 466 ## ECL_02115 hypothetical protein - Term 693235 - 693287 4.0 631 335 Tu 1 . - CDS 693403 - 694329 441 ## COG0583 Transcriptional regulator - Prom 694410 - 694469 2.4 - TRNA 694580 - 694666 70.6 # Leu TAA 0 0 - TRNA 694678 - 694751 53.9 # Cys GCA 0 0 - TRNA 694803 - 694878 93.7 # Gly GCC 0 0 632 336 Op 1 9/0.047 - CDS 695041 - 695589 249 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Term 695610 - 695643 -0.2 633 336 Op 2 3/0.435 - CDS 695646 - 697412 2108 ## COG0322 Nuclease subunit of the excinuclease complex 634 336 Op 3 . - CDS 697475 - 697975 463 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 698175 - 698234 3.8 + Prom 698487 - 698546 5.6 635 337 Tu 1 . + CDS 698597 - 698821 309 ## ECL_01373 hypothetical protein + Term 698829 - 698866 8.2 - Term 698812 - 698858 9.8 636 338 Tu 1 . - CDS 698887 - 699408 333 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 699648 - 699707 8.7 - Term 699777 - 699817 9.9 637 339 Op 1 34/0.000 - CDS 699833 - 700585 279 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 638 339 Op 2 1/0.649 - CDS 700582 - 701250 831 ## COG0765 ABC-type amino acid transport system, permease component 639 339 Op 3 2/0.532 - CDS 701272 - 702258 1166 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase - Prom 702285 - 702344 9.6 - Term 702312 - 702341 2.1 640 340 Op 1 . - CDS 702362 - 703162 1219 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 703186 - 703245 3.5 641 340 Op 2 . - CDS 703249 - 703800 451 ## ECL_01367 flagella biosynthesis protein FliZ 642 340 Op 3 3/0.435 - CDS 703855 - 704544 746 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit - Prom 704604 - 704663 4.2 - Term 704691 - 704718 1.5 643 341 Tu 1 . - CDS 704738 - 706447 1378 ## COG1344 Flagellin and related hook-associated proteins - Prom 706619 - 706678 2.5 + Prom 706510 - 706569 6.8 644 342 Op 1 15/0.005 + CDS 706717 - 708129 1173 ## COG1345 Flagellar capping protein 645 342 Op 2 . + CDS 708160 - 708570 517 ## COG1516 Flagellin-specific chaperone FliS 646 342 Op 3 . + CDS 708570 - 708941 339 ## Entcl_1815 flagellar export chaperone + Term 708950 - 708996 2.5 647 342 Op 4 . + CDS 709040 - 710527 1723 ## COG0366 Glycosidases + Term 710648 - 710686 7.2 - Term 710634 - 710674 6.2 648 343 Op 1 . - CDS 710684 - 711097 517 ## ECL_01352 hypothetical protein 649 343 Op 2 . - CDS 711172 - 711486 438 ## COG1677 Flagellar hook-basal body protein - Prom 711512 - 711571 2.0 + Prom 711504 - 711563 2.2 650 344 Op 1 19/0.000 + CDS 711715 - 713397 1720 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein 651 344 Op 2 15/0.005 + CDS 713390 - 714388 1316 ## COG1536 Flagellar motor switch protein 652 344 Op 3 13/0.014 + CDS 714381 - 715088 841 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 653 344 Op 4 12/0.016 + CDS 715088 - 716458 1640 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 654 344 Op 5 8/0.052 + CDS 716480 - 716923 423 ## COG2882 Flagellar biosynthesis chaperone 655 344 Op 6 7/0.083 + CDS 716920 - 718137 1137 ## COG3144 Flagellar hook-length control protein + Prom 718151 - 718210 2.7 656 345 Op 1 13/0.014 + CDS 718244 - 718714 480 ## COG1580 Flagellar basal body-associated protein 657 345 Op 2 20/0.000 + CDS 718719 - 719723 1334 ## COG1868 Flagellar motor switch protein 658 345 Op 3 6/0.131 + CDS 719720 - 720133 636 ## COG1886 Flagellar motor switch/type III secretory pathway protein 659 345 Op 4 6/0.131 + CDS 720136 - 720510 371 ## COG3190 Flagellar biogenesis protein 660 345 Op 5 16/0.000 + CDS 720510 - 721247 858 ## COG1338 Flagellar biosynthesis pathway, component FliP 661 345 Op 6 17/0.000 + CDS 721258 - 721527 449 ## COG1987 Flagellar biosynthesis pathway, component FliQ 662 345 Op 7 4/0.342 + CDS 721534 - 722319 1010 ## COG1684 Flagellar biosynthesis pathway, component FliR + Prom 722387 - 722446 4.1 663 346 Tu 1 . + CDS 722617 - 723240 326 ## COG2771 DNA-binding HTH domain-containing proteins + Term 723269 - 723303 5.3 664 347 Tu 1 . - CDS 723340 - 723528 277 ## ECL_03234 hypothetical protein - Prom 723549 - 723608 2.1 + Prom 723363 - 723422 3.1 665 348 Tu 1 . + CDS 723657 - 723884 345 ## ECL_03235 hypothetical protein + Prom 723901 - 723960 5.5 666 349 Tu 1 . + CDS 724180 - 724980 756 ## COG3769 Predicted hydrolase (HAD superfamily) 667 350 Tu 1 . - CDS 724965 - 726692 1482 ## COG2199 FOG: GGDEF domain - Prom 726921 - 726980 2.8 668 351 Tu 1 . - CDS 727010 - 727855 1033 ## COG2354 Uncharacterized protein conserved in bacteria - Prom 727963 - 728022 3.8 + Prom 727881 - 727940 3.7 669 352 Tu 1 . + CDS 728100 - 729014 1186 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 670 353 Op 1 6/0.131 - CDS 728986 - 729477 361 ## COG3727 DNA G:T-mismatch repair endonuclease 671 353 Op 2 4/0.342 - CDS 729458 - 730891 1369 ## COG0270 Site-specific DNA methylase 672 353 Op 3 . - CDS 730935 - 731636 736 ## COG1418 Predicted HD superfamily hydrolase - Prom 731663 - 731722 8.2 + Prom 731767 - 731826 6.6 673 354 Tu 1 . + CDS 731922 - 733085 1395 ## COG3203 Outer membrane protein (porin) + Term 733103 - 733129 -0.7 - Term 733091 - 733117 0.1 674 355 Tu 1 . - CDS 733141 - 734004 801 ## COG2103 Predicted sugar phosphate isomerase - Prom 734028 - 734087 3.3 + Prom 734075 - 734134 5.0 675 356 Op 1 9/0.047 + CDS 734158 - 735774 1721 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 676 356 Op 2 . + CDS 735771 - 736490 295 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Term 736522 - 736563 6.3 - Term 736232 - 736269 1.1 677 357 Op 1 . - CDS 736471 - 737433 1121 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 678 357 Op 2 . - CDS 737491 - 740271 3775 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 740310 - 740369 3.6 679 358 Op 1 1/0.649 + CDS 740880 - 742388 2178 ## COG0471 Di- and tricarboxylate transporters + Term 742394 - 742432 5.9 680 358 Op 2 . + CDS 742442 - 744091 479 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 744160 - 744195 1.1 681 359 Tu 1 . - CDS 744080 - 745069 991 ## COG0583 Transcriptional regulator + Prom 744978 - 745037 5.2 682 360 Tu 1 . + CDS 745081 - 746376 1426 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 746386 - 746415 2.8 + Prom 746434 - 746493 3.0 683 361 Op 1 . + CDS 746637 - 747938 1667 ## COG0477 Permeases of the major facilitator superfamily 684 361 Op 2 . + CDS 747945 - 748733 722 ## COG0725 ABC-type molybdate transport system, periplasmic component - Term 748678 - 748704 -0.7 685 362 Tu 1 . - CDS 748705 - 749607 641 ## COG0583 Transcriptional regulator - Prom 749642 - 749701 3.5 + Prom 749762 - 749821 2.5 686 363 Tu 1 . + CDS 749874 - 750671 850 ## COG3228 Uncharacterized protein conserved in bacteria + Term 750821 - 750862 -0.9 687 364 Tu 1 . - CDS 750668 - 751876 1153 ## COG0477 Permeases of the major facilitator superfamily - Prom 751935 - 751994 6.8 + Prom 751924 - 751983 3.5 688 365 Op 1 5/0.212 + CDS 752015 - 753757 2194 ## COG4264 Siderophore synthetase component 689 365 Op 2 5/0.212 + CDS 753757 - 754704 1225 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 690 365 Op 3 3/0.435 + CDS 754734 - 756443 2045 ## COG4264 Siderophore synthetase component 691 365 Op 4 1/0.649 + CDS 756440 - 757738 1455 ## COG3486 Lysine/ornithine N-monooxygenase 692 365 Op 5 . + CDS 757793 - 759982 2994 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 760231 - 760271 9.2 + TRNA 760150 - 760225 87.1 # Asn GTT 0 0 693 366 Tu 1 . - CDS 760515 - 761093 -35 ## EFER_3830 hypothetical protein 694 367 Tu 1 . + CDS 761799 - 763352 1405 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 763420 - 763455 1.9 - Term 763399 - 763456 2.9 695 368 Tu 1 9/0.047 - CDS 763627 - 764505 1018 ## COG0583 Transcriptional regulator - Prom 764548 - 764607 4.0 696 369 Tu 1 3/0.435 - CDS 764674 - 765591 1048 ## COG0583 Transcriptional regulator + TRNA 765912 - 765987 87.1 # Asn GTT 0 0 - Term 765984 - 766016 4.0 697 370 Tu 1 . - CDS 766073 - 767008 713 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 767035 - 767094 3.2 + Prom 767033 - 767092 5.9 698 371 Op 1 3/0.435 + CDS 767202 - 768518 1576 ## COG0477 Permeases of the major facilitator superfamily 699 371 Op 2 . + CDS 768595 - 770049 1694 ## COG0775 Nucleoside phosphorylase + Term 770152 - 770183 2.1 - TRNA 770181 - 770256 87.1 # Asn GTT 0 0 - Term 770211 - 770249 -0.8 700 372 Tu 1 . - CDS 770360 - 771778 1368 ## COG0534 Na+-driven multidrug efflux pump - Prom 772023 - 772082 80.1 + TRNA 772005 - 772080 87.1 # Asn GTT 0 0 - Term 772126 - 772165 4.5 701 373 Tu 1 2/0.532 - CDS 772220 - 772555 516 ## COG2926 Uncharacterized protein conserved in bacteria - Prom 772594 - 772653 3.4 702 374 Op 1 4/0.342 - CDS 772703 - 773761 855 ## COG1289 Predicted membrane protein - Term 773781 - 773838 3.7 703 374 Op 2 3/0.435 - CDS 773853 - 774326 445 ## COG3449 DNA gyrase inhibitor - Prom 774351 - 774410 9.3 704 375 Tu 1 . - CDS 774445 - 775488 1141 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 775699 - 775758 3.6 + Prom 775585 - 775644 3.3 705 376 Tu 1 . + CDS 775809 - 777245 1613 ## COG2925 Exonuclease I + Term 777263 - 777295 5.4 - Term 777251 - 777283 2.2 706 377 Tu 1 . - CDS 777367 - 778725 1844 ## COG0531 Amino acid transporters - Prom 778873 - 778932 7.8 - Term 778869 - 778914 4.9 707 378 Op 1 2/0.532 - CDS 778997 - 779938 803 ## COG0583 Transcriptional regulator 708 378 Op 2 . - CDS 779968 - 780792 741 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 780914 - 780973 5.1 + Prom 780873 - 780932 2.5 709 379 Op 1 18/0.000 + CDS 781160 - 782059 1263 ## COG0040 ATP phosphoribosyltransferase 710 379 Op 2 19/0.000 + CDS 782065 - 783369 1305 ## COG0141 Histidinol dehydrogenase 711 379 Op 3 13/0.014 + CDS 783366 - 784427 1318 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 712 379 Op 4 18/0.000 + CDS 784424 - 785491 1525 ## COG0131 Imidazoleglycerol-phosphate dehydratase 713 379 Op 5 25/0.000 + CDS 785491 - 786081 674 ## COG0118 Glutamine amidotransferase 714 379 Op 6 23/0.000 + CDS 786081 - 786818 695 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 715 379 Op 7 24/0.000 + CDS 786800 - 787576 934 ## COG0107 Imidazoleglycerol-phosphate synthase 716 379 Op 8 . + CDS 787570 - 788181 634 ## COG0139 Phosphoribosyl-AMP cyclohydrolase + Term 788186 - 788216 3.0 - Term 788167 - 788211 9.1 717 380 Tu 1 . - CDS 788220 - 789200 807 ## COG3765 Chain length determinant protein - Prom 789371 - 789430 4.4 + Prom 789285 - 789344 2.2 718 381 Tu 1 . + CDS 789395 - 790399 1151 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 790410 - 790438 3.0 - Term 790391 - 790434 8.4 719 382 Tu 1 . - CDS 790449 - 791615 1606 ## COG1004 Predicted UDP-glucose 6-dehydrogenase - Prom 791756 - 791815 3.8 - Term 791800 - 791851 1.7 720 383 Op 1 16/0.000 - CDS 791855 - 792736 562 ## COG1209 dTDP-glucose pyrophosphorylase 721 383 Op 2 . - CDS 792737 - 793723 399 ## COG1088 dTDP-D-glucose 4,6-dehydratase - Prom 793833 - 793892 3.1 - Term 793857 - 793888 4.1 722 384 Op 1 . - CDS 793912 - 795318 1874 ## COG0362 6-phosphogluconate dehydrogenase - Prom 795350 - 795409 3.9 723 384 Op 2 2/0.532 - CDS 795412 - 795963 -11 ## COG1087 UDP-glucose 4-epimerase - Prom 796198 - 796257 7.5 - Term 796568 - 796619 19.2 724 385 Tu 1 . - CDS 796620 - 797120 -225 ## COG0438 Glycosyltransferase - Prom 797151 - 797210 7.0 725 386 Tu 1 . - CDS 797648 - 797839 129 ## - Prom 797993 - 798052 4.6 - Term 798421 - 798487 30.0 726 387 Op 1 8/0.052 - CDS 798565 - 799035 -197 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 727 387 Op 2 . - CDS 799097 - 799753 29 ## COG0438 Glycosyltransferase - Term 800030 - 800069 -0.7 728 387 Op 3 . - CDS 800162 - 800692 -17 ## gi|5739464|gb|AAD50486.1|AF172324_4 O-antigen polymerase Wzy - Prom 800873 - 800932 80.3 - Term 800700 - 800768 13.5 729 388 Tu 1 . - CDS 800934 - 801551 51 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 801663 - 801722 6.9 - Term 803217 - 803248 0.2 730 389 Tu 1 . - CDS 803266 - 804162 1128 ## COG1210 UDP-glucose pyrophosphorylase - Prom 804185 - 804244 5.7 - Term 804227 - 804261 -0.3 731 390 Op 1 . - CDS 804337 - 805728 908 ## ECL_03366 putative colanic acid biosynthesis protein 732 390 Op 2 7/0.083 - CDS 805741 - 806961 1320 ## COG0438 Glycosyltransferase 733 390 Op 3 4/0.342 - CDS 806958 - 808238 1612 ## COG2327 Uncharacterized conserved protein 734 390 Op 4 7/0.083 - CDS 808254 - 809732 2107 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 735 390 Op 5 4/0.342 - CDS 809734 - 811074 1580 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Prom 811111 - 811170 1.8 736 391 Tu 1 . - CDS 811314 - 812684 1980 ## COG1109 Phosphomannomutase - Prom 812726 - 812785 1.7 737 392 Op 1 5/0.212 - CDS 812794 - 814230 1809 ## COG0836 Mannose-1-phosphate guanylyltransferase 738 392 Op 2 6/0.131 - CDS 814234 - 815457 1264 ## COG0438 Glycosyltransferase 739 392 Op 3 3/0.435 - CDS 815454 - 815933 477 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 740 392 Op 4 14/0.011 - CDS 815936 - 816901 1431 ## COG0451 Nucleoside-diphosphate-sugar epimerases 741 392 Op 5 5/0.212 - CDS 816904 - 818025 1622 ## COG1089 GDP-D-mannose dehydratase 742 392 Op 6 7/0.083 - CDS 818047 - 818601 292 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 743 392 Op 7 . - CDS 818618 - 819364 834 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 744 392 Op 8 . - CDS 819381 - 820601 1203 ## ECL_03379 putative colanic acid biosynthesis protein 745 392 Op 9 5/0.212 - CDS 820576 - 821793 1548 ## COG0438 Glycosyltransferase 746 392 Op 10 4/0.342 - CDS 821790 - 822281 479 ## COG1045 Serine acetyltransferase 747 392 Op 11 2/0.532 - CDS 822281 - 823123 1030 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 748 393 Op 1 3/0.435 - CDS 823246 - 825408 2737 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 749 393 Op 2 6/0.131 - CDS 825411 - 825854 562 ## COG0394 Protein-tyrosine-phosphatase 750 393 Op 3 . - CDS 825861 - 826997 1237 ## COG1596 Periplasmic protein involved in polysaccharide export + Prom 827422 - 827481 3.7 751 394 Tu 1 . + CDS 827691 - 829274 1914 ## COG1253 Hemolysins and related proteins containing CBS domains 752 395 Op 1 4/0.342 - CDS 829365 - 831215 1878 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 753 395 Op 2 4/0.342 - CDS 831239 - 831820 750 ## COG0717 Deoxycytidine deaminase 754 395 Op 3 . - CDS 831912 - 832553 728 ## COG0572 Uridine kinase - Prom 832795 - 832854 5.7 + Prom 832759 - 832818 6.0 755 396 Tu 1 . + CDS 832896 - 836225 3314 ## COG2202 FOG: PAS/PAC domain 756 397 Tu 1 . - CDS 836190 - 837062 901 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase + Prom 837108 - 837167 4.7 757 398 Tu 1 . + CDS 837241 - 838545 1507 ## COG0443 Molecular chaperone + Prom 838636 - 838695 3.5 758 399 Op 1 27/0.000 + CDS 838724 - 839926 1463 ## COG0845 Membrane-fusion protein 759 399 Op 2 10/0.036 + CDS 839926 - 843048 4391 ## COG0841 Cation/multidrug efflux pump 760 399 Op 3 5/0.212 + CDS 843049 - 846126 3681 ## COG0841 Cation/multidrug efflux pump 761 399 Op 4 10/0.036 + CDS 846127 - 847542 1773 ## COG0477 Permeases of the major facilitator superfamily 762 399 Op 5 40/0.000 + CDS 847539 - 848942 1554 ## COG0642 Signal transduction histidine kinase 763 399 Op 6 . + CDS 848939 - 849661 958 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 849669 - 849734 16.6 + Prom 849700 - 849759 5.8 764 400 Tu 1 . + CDS 849836 - 851197 1904 ## COG0826 Collagenase and related proteases + Term 851333 - 851370 5.4 + Prom 851361 - 851420 4.9 765 401 Tu 1 . + CDS 851446 - 852345 785 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 766 402 Tu 1 . - CDS 852835 - 853887 1417 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - Prom 854092 - 854151 3.6 + Prom 853999 - 854058 4.2 767 403 Op 1 4/0.342 + CDS 854136 - 855413 1876 ## COG0477 Permeases of the major facilitator superfamily 768 403 Op 2 5/0.212 + CDS 855410 - 856414 1189 ## COG1397 ADP-ribosylglycohydrolase 769 403 Op 3 . + CDS 856411 - 857364 1014 ## COG0524 Sugar kinases, ribokinase family + Term 857401 - 857457 16.5 770 404 Op 1 1/0.649 - CDS 857338 - 858084 546 ## COG2188 Transcriptional regulators 771 404 Op 2 12/0.016 - CDS 858127 - 858927 931 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 772 404 Op 3 . - CDS 858924 - 859694 533 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family - Prom 859820 - 859879 3.7 + Prom 860132 - 860191 6.3 773 405 Tu 1 . + CDS 860381 - 860536 59 ## gi|295098176|emb|CBK87266.1| YadA-like C-terminal region + Term 860549 - 860598 -0.7 + Prom 860569 - 860628 6.0 774 406 Tu 1 . + CDS 860736 - 861164 177 ## Ent638_2712 hypothetical protein + Term 861174 - 861204 1.0 + Prom 861191 - 861250 6.6 775 407 Op 1 4/0.342 + CDS 861479 - 862852 1452 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 776 407 Op 2 . + CDS 862871 - 864337 2052 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins + Term 864342 - 864382 9.2 - Term 864326 - 864368 4.3 777 408 Op 1 3/0.435 - CDS 864382 - 866580 1459 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 778 408 Op 2 6/0.131 - CDS 866580 - 867029 387 ## COG0394 Protein-tyrosine-phosphatase 779 408 Op 3 . - CDS 867029 - 868168 963 ## COG1596 Periplasmic protein involved in polysaccharide export - Prom 868228 - 868287 4.5 + Prom 868528 - 868587 9.2 780 409 Op 1 . + CDS 868634 - 868981 383 ## COG5455 Predicted integral membrane protein 781 409 Op 2 . + CDS 868926 - 869411 378 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 869437 - 869489 10.7 782 410 Tu 1 . - CDS 869501 - 870610 1254 ## COG0489 ATPases involved in chromosome partitioning - Prom 870648 - 870707 4.9 + Prom 870684 - 870743 3.7 783 411 Tu 1 . + CDS 870776 - 872809 2670 ## COG0143 Methionyl-tRNA synthetase + Term 872817 - 872846 2.1 - Term 872805 - 872834 2.1 784 412 Op 1 2/0.532 - CDS 872919 - 873389 538 ## COG4807 Uncharacterized protein conserved in bacteria 785 412 Op 2 9/0.047 - CDS 873436 - 874155 982 ## COG3279 Response regulator of the LytR/AlgR family 786 412 Op 3 . - CDS 874149 - 875834 1685 ## COG3275 Putative regulator of cell autolysis - Prom 875858 - 875917 2.1 + Prom 875917 - 875976 4.7 787 413 Op 1 . + CDS 876053 - 876793 466 ## COG0789 Predicted transcriptional regulators 788 413 Op 2 . + CDS 876863 - 876976 72 ## + Term 877102 - 877152 1.3 789 414 Op 1 24/0.000 - CDS 876951 - 877625 668 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 790 414 Op 2 24/0.000 - CDS 877672 - 878622 1071 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 791 414 Op 3 13/0.014 - CDS 878615 - 879772 1153 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 792 414 Op 4 4/0.342 - CDS 879785 - 880702 1455 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) - Term 880789 - 880823 8.3 793 415 Tu 1 . - CDS 880839 - 883136 3059 ## COG1472 Beta-glucosidase-related glycosidases - Prom 883191 - 883250 2.1 + Prom 883184 - 883243 2.0 794 416 Op 1 . + CDS 883326 - 885104 2014 ## COG0277 FAD/FMN-containing dehydrogenases + Term 885139 - 885172 4.7 795 416 Op 2 . + CDS 885186 - 885740 507 ## COG1247 Sortase and related acyltransferases + Term 885801 - 885841 4.2 - Term 885795 - 885824 1.4 796 417 Tu 1 . - CDS 885837 - 886760 1122 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 886834 - 886893 2.4 - Term 886872 - 886924 2.4 797 418 Tu 1 . - CDS 886928 - 887542 728 ## ECL_03447 hypothetical protein - Prom 887562 - 887621 1.8 + Prom 887508 - 887567 5.3 798 419 Tu 1 . + CDS 887673 - 888245 626 ## COG0586 Uncharacterized membrane-associated protein + Term 888378 - 888426 0.0 799 420 Op 1 2/0.532 - CDS 888250 - 889014 202 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 800 420 Op 2 1/0.649 - CDS 889065 - 890483 1387 ## COG1538 Outer membrane protein - Prom 890507 - 890566 3.5 801 421 Tu 1 . - CDS 890817 - 891752 1163 ## COG0042 tRNA-dihydrouridine synthase - Prom 891774 - 891833 3.8 + Prom 891841 - 891900 2.9 802 422 Op 1 23/0.000 + CDS 891921 - 892316 481 ## COG1380 Putative effector of murein hydrolase LrgA 803 422 Op 2 5/0.212 + CDS 892313 - 893008 804 ## COG1346 Putative effector of murein hydrolase + Term 893011 - 893042 -0.8 + Prom 893011 - 893070 4.6 804 423 Op 1 . + CDS 893137 - 894021 950 ## COG0295 Cytidine deaminase + Prom 894057 - 894116 2.9 805 423 Op 2 . + CDS 894149 - 894859 949 ## COG2949 Uncharacterized membrane protein + Term 894949 - 894983 5.0 - Term 894935 - 894969 5.0 806 424 Op 1 10/0.036 - CDS 894987 - 895997 1381 ## COG4211 ABC-type glucose/galactose transport system, permease component 807 424 Op 2 16/0.000 - CDS 896013 - 897533 198 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 897560 - 897591 4.1 808 424 Op 3 6/0.131 - CDS 897613 - 898611 1331 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 898827 - 898886 4.2 - Term 898848 - 898877 -0.2 809 425 Tu 1 . - CDS 898907 - 899929 1272 ## COG1609 Transcriptional regulators - Prom 900007 - 900066 1.7 810 426 Op 1 4/0.342 - CDS 900085 - 901242 1300 ## COG2311 Predicted membrane protein 811 426 Op 2 1/0.649 - CDS 901261 - 901929 978 ## COG0302 GTP cyclohydrolase I 812 427 Tu 1 . - CDS 902032 - 903180 1470 ## COG0477 Permeases of the major facilitator superfamily - Prom 903269 - 903328 4.3 + Prom 903228 - 903287 3.6 813 428 Tu 1 . + CDS 903318 - 904145 891 ## COG0627 Predicted esterase + Term 904159 - 904196 3.5 + Prom 904258 - 904317 6.8 814 429 Tu 1 . + CDS 904413 - 906398 2306 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Term 906401 - 906433 5.0 815 430 Op 1 . - CDS 906453 - 907922 1829 ## COG0833 Amino acid transporters - Prom 907950 - 908009 3.5 816 430 Op 2 . - CDS 908107 - 908973 1040 ## COG0583 Transcriptional regulator - Prom 908993 - 909052 6.9 + Prom 908962 - 909021 9.0 817 431 Op 1 5/0.212 + CDS 909071 - 910117 1173 ## COG2855 Predicted membrane protein 818 431 Op 2 . + CDS 910182 - 911039 1145 ## COG0648 Endonuclease IV + Term 911046 - 911082 6.1 - Term 911033 - 911069 4.0 819 432 Op 1 19/0.000 - CDS 911115 - 912800 2403 ## COG1299 Phosphotransferase system, fructose-specific IIC component 820 432 Op 2 11/0.023 - CDS 912817 - 913755 1154 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 821 432 Op 3 . - CDS 913755 - 914885 1522 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 822 433 Tu 1 . + CDS 915193 - 916425 1293 ## COG0477 Permeases of the major facilitator superfamily 823 434 Tu 1 . - CDS 916422 - 916676 121 ## COG0727 Predicted Fe-S-cluster oxidoreductase - Prom 916873 - 916932 3.0 + Prom 916748 - 916807 3.4 824 435 Tu 1 . + CDS 916841 - 917413 799 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 917462 - 917506 11.2 - Term 917450 - 917493 11.3 825 436 Tu 1 . - CDS 917537 - 918727 1573 ## COG1312 D-mannonate dehydratase - Prom 918879 - 918938 5.2 + Prom 918843 - 918902 5.9 826 437 Tu 1 . + CDS 918933 - 920399 1384 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Prom 920444 - 920503 2.5 827 438 Op 1 3/0.435 + CDS 920523 - 921509 981 ## COG0523 Putative GTPases (G3E family) 828 438 Op 2 3/0.435 + CDS 921543 - 922256 789 ## COG0671 Membrane-associated phospholipid phosphatase + Term 922278 - 922319 5.7 + Prom 922629 - 922688 4.2 829 439 Tu 1 . + CDS 922777 - 923241 365 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 923294 - 923321 0.1 + Prom 923278 - 923337 3.9 830 440 Op 1 2/0.532 + CDS 923369 - 924922 1591 ## COG2200 FOG: EAL domain 831 440 Op 2 11/0.023 + CDS 924998 - 926803 1935 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 832 440 Op 3 11/0.023 + CDS 926813 - 927907 1285 ## COG4174 ABC-type uncharacterized transport system, permease component 833 440 Op 4 11/0.023 + CDS 927907 - 928932 1195 ## COG4239 ABC-type uncharacterized transport system, permease component 834 440 Op 5 . + CDS 928934 - 930523 177 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Term 930251 - 930295 2.1 835 441 Tu 1 . - CDS 930527 - 930871 258 ## ECL_03500 hypothetical protein - Prom 930911 - 930970 5.7 - Term 931111 - 931139 2.1 836 442 Op 1 8/0.052 - CDS 931148 - 932347 1418 ## COG0477 Permeases of the major facilitator superfamily 837 442 Op 2 . - CDS 932363 - 933070 826 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 933136 - 933195 4.2 + Prom 933141 - 933200 2.4 838 443 Op 1 . + CDS 933222 - 934982 1803 ## COG1061 DNA or RNA helicases of superfamily II + Term 935059 - 935096 3.1 839 443 Op 2 . + CDS 935108 - 935392 435 ## PROTEIN SUPPORTED gi|152971157|ref|YP_001336266.1| 50S ribosomal protein L25 + Term 935403 - 935455 12.1 - Term 935402 - 935429 1.5 840 444 Tu 1 . - CDS 935444 - 936451 1448 ## COG3081 Nucleoid-associated protein - Prom 936473 - 936532 4.1 + Prom 936408 - 936467 4.0 841 445 Op 1 8/0.052 + CDS 936586 - 936813 258 ## COG3082 Uncharacterized protein conserved in bacteria 842 445 Op 2 . + CDS 936833 - 938593 1964 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily + Term 938760 - 938789 1.2 + TRNA 938667 - 938743 78.0 # Pro GGG 0 0 - Term 938736 - 938793 6.2 843 446 Tu 1 . - CDS 938810 - 939070 361 ## ECL_03510 hypothetical protein - Prom 939158 - 939217 3.2 + Prom 939064 - 939123 4.4 844 447 Tu 1 . + CDS 939273 - 939782 470 ## COG4574 Serine protease inhibitor ecotin + Term 939840 - 939879 -1.0 - Term 939773 - 939819 6.1 845 448 Tu 1 . - CDS 939876 - 941525 2073 ## COG0579 Predicted dehydrogenase - Prom 941644 - 941703 3.7 + Prom 941496 - 941555 2.6 846 449 Tu 1 . + CDS 941767 - 943008 1426 ## COG0659 Sulfate permease and related transporters (MFS superfamily) 847 450 Tu 1 . - CDS 942971 - 944407 1621 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 944433 - 944492 3.3 848 451 Op 1 4/0.342 - CDS 944555 - 946198 191 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 946223 - 946282 5.5 849 451 Op 2 4/0.342 - CDS 946284 - 946925 609 ## COG3145 Alkylated DNA repair protein 850 451 Op 3 3/0.435 - CDS 946925 - 947983 1086 ## COG2169 Adenosine deaminase 851 451 Op 4 4/0.342 - CDS 948056 - 949111 1067 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 949154 - 949213 3.0 - Term 949179 - 949206 1.5 852 452 Tu 1 . - CDS 949226 - 950317 1534 ## COG3203 Outer membrane protein (porin) - Prom 950509 - 950568 8.2 + Prom 950964 - 951023 2.9 853 453 Op 1 12/0.016 + CDS 951061 - 953733 2842 ## COG0642 Signal transduction histidine kinase 854 453 Op 2 . + CDS 953750 - 954400 794 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 954487 - 954527 4.2 - Term 954482 - 954507 -0.5 855 454 Tu 1 . - CDS 954513 - 957359 3351 ## COG0642 Signal transduction histidine kinase - Prom 957394 - 957453 2.5 - Term 957443 - 957482 8.1 856 455 Tu 1 . - CDS 957495 - 960131 3435 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 960169 - 960228 5.9 + Prom 960191 - 960250 5.8 857 456 Tu 1 . + CDS 960278 - 961006 949 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase + Term 961031 - 961065 5.3 + Prom 961275 - 961334 6.9 858 457 Tu 1 24/0.000 + CDS 961356 - 963641 3135 ## COG0209 Ribonucleotide reductase, alpha subunit + Prom 963754 - 963813 80.4 859 458 Op 1 8/0.052 + CDS 963908 - 965038 1734 ## COG0208 Ribonucleotide reductase, beta subunit 860 458 Op 2 . + CDS 965038 - 965292 216 ## COG0633 Ferredoxin - Term 965231 - 965268 1.5 861 459 Op 1 6/0.131 - CDS 965376 - 966437 1510 ## COG0584 Glycerophosphoryl diester phosphodiesterase 862 459 Op 2 . - CDS 966449 - 967801 1762 ## COG2271 Sugar phosphate permease - Prom 967911 - 967970 3.5 + Prom 967933 - 967992 3.0 863 460 Op 1 9/0.047 + CDS 968051 - 969679 1721 ## COG0578 Glycerol-3-phosphate dehydrogenase 864 460 Op 2 8/0.052 + CDS 969669 - 970886 1249 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 865 460 Op 3 . + CDS 970883 - 972073 1151 ## COG0247 Fe-S oxidoreductase + Term 972078 - 972112 7.0 - Term 971990 - 972049 10.0 866 461 Op 1 . - CDS 972105 - 973304 1313 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - Prom 973326 - 973385 2.1 - Term 973357 - 973391 4.1 867 461 Op 2 . - CDS 973399 - 973938 873 ## ECL_03537 YfaZ family protein - Prom 973979 - 974038 4.6 868 462 Op 1 40/0.000 - CDS 974068 - 975477 1345 ## COG0642 Signal transduction histidine kinase 869 462 Op 2 . - CDS 975464 - 976138 678 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 976183 - 976242 3.5 + Prom 976139 - 976198 3.2 870 463 Op 1 . + CDS 976291 - 977271 1383 ## COG3181 Uncharacterized protein conserved in bacteria 871 463 Op 2 . + CDS 977283 - 977714 588 ## ECL_03608 putative tricarboxylic transport membrane protein 872 463 Op 3 . + CDS 977726 - 979240 2150 ## COG3333 Uncharacterized protein conserved in bacteria + Term 979281 - 979316 3.3 873 464 Op 1 6/0.131 - CDS 979241 - 980602 1268 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 874 464 Op 2 5/0.212 - CDS 980599 - 981564 937 ## COG1441 O-succinylbenzoate synthase 875 464 Op 3 9/0.047 - CDS 981564 - 982421 1019 ## COG0447 Dihydroxynaphthoic acid synthase 876 464 Op 4 15/0.005 - CDS 982418 - 983194 445 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 877 464 Op 5 10/0.036 - CDS 983191 - 984861 1738 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase - Prom 984884 - 984943 3.6 878 464 Op 6 1/0.649 - CDS 984950 - 986245 942 ## COG1169 Isochorismate synthase - Prom 986266 - 986325 4.8 879 465 Op 1 4/0.342 - CDS 986332 - 986637 456 ## COG4575 Uncharacterized conserved protein 880 465 Op 2 . - CDS 986688 - 987152 681 ## COG2153 Predicted acyltransferase - Prom 987176 - 987235 1.7 + Prom 987135 - 987194 3.0 881 466 Op 1 2/0.532 + CDS 987224 - 988141 873 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 882 466 Op 2 . + CDS 988206 - 989210 1370 ## COG0835 Chemotaxis signal transduction protein + Term 989294 - 989333 7.7 - Term 989289 - 989314 -0.5 883 467 Op 1 22/0.000 - CDS 989330 - 990787 2319 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) 884 467 Op 2 30/0.000 - CDS 990794 - 992323 1993 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) - Prom 992417 - 992476 2.5 885 467 Op 3 26/0.000 - CDS 992492 - 994333 2457 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 886 467 Op 4 30/0.000 - CDS 994330 - 994632 386 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 887 467 Op 5 28/0.000 - CDS 994629 - 995183 748 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 888 467 Op 6 31/0.000 - CDS 995194 - 995736 696 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 889 467 Op 7 18/0.000 - CDS 995751 - 996728 1185 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 890 467 Op 8 12/0.016 - CDS 996725 - 999448 3340 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 891 467 Op 9 23/0.000 - CDS 999503 - 1000840 1602 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 892 467 Op 10 15/0.005 - CDS 1000837 - 1001337 588 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 893 467 Op 11 9/0.047 - CDS 1001340 - 1003130 2216 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 894 468 Op 1 30/0.000 - CDS 1003232 - 1003906 787 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 895 468 Op 2 3/0.435 - CDS 1003922 - 1004362 381 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) - Term 1004897 - 1004958 14.5 896 469 Tu 1 . - CDS 1004994 - 1005908 601 ## COG0583 Transcriptional regulator + Prom 1006714 - 1006773 2.6 897 470 Tu 1 . + CDS 1006870 - 1008084 1474 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Prom 1008117 - 1008176 5.2 898 471 Tu 1 . + CDS 1008202 - 1008801 766 ## COG1896 Predicted hydrolases of HD superfamily 899 472 Tu 1 . - CDS 1008884 - 1010641 1997 ## COG0471 Di- and tricarboxylate transporters - Prom 1010710 - 1010769 2.2 - Term 1010750 - 1010779 1.1 900 473 Op 1 . - CDS 1010792 - 1011451 512 ## COG0637 Predicted phosphatase/phosphohexomutase 901 473 Op 2 2/0.532 - CDS 1011463 - 1011957 652 ## COG3013 Uncharacterized conserved protein - Prom 1011978 - 1012037 1.7 - Term 1011980 - 1012024 4.5 902 474 Tu 1 . - CDS 1012050 - 1012505 546 ## COG3092 Uncharacterized protein conserved in bacteria - Prom 1012663 - 1012722 4.2 + Prom 1012639 - 1012698 5.8 903 475 Op 1 14/0.011 + CDS 1012843 - 1014045 1480 ## COG0282 Acetate kinase + Term 1014049 - 1014088 10.1 904 475 Op 2 . + CDS 1014137 - 1016263 2596 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase + Term 1016341 - 1016382 5.4 - Term 1016333 - 1016366 2.8 905 476 Op 1 12/0.016 - CDS 1016374 - 1017327 983 ## COG3958 Transketolase, C-terminal subunit 906 476 Op 2 1/0.649 - CDS 1017320 - 1018150 942 ## COG3959 Transketolase, N-terminal subunit 907 476 Op 3 11/0.023 - CDS 1018147 - 1019538 1888 ## COG3037 Uncharacterized protein conserved in bacteria 908 476 Op 4 13/0.014 - CDS 1019560 - 1019832 190 ## PROTEIN SUPPORTED gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative 909 476 Op 5 . - CDS 1019912 - 1020355 318 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 1020512 - 1020571 2.3 + Prom 1020498 - 1020557 5.2 910 477 Tu 1 . + CDS 1020670 - 1021611 963 ## COG1609 Transcriptional regulators + Term 1021724 - 1021754 -0.6 911 478 Op 1 3/0.435 - CDS 1021615 - 1022181 641 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 912 478 Op 2 2/0.532 - CDS 1022237 - 1022788 733 ## COG0622 Predicted phosphoesterase 913 478 Op 3 . - CDS 1022845 - 1023525 655 ## COG0625 Glutathione S-transferase + Prom 1023510 - 1023569 3.4 914 479 Op 1 3/0.435 + CDS 1023630 - 1024259 728 ## COG0625 Glutathione S-transferase + Term 1024261 - 1024294 5.2 915 479 Op 2 3/0.435 + CDS 1024335 - 1024703 375 ## COG1539 Dihydroneopterin aldolase 916 479 Op 3 . + CDS 1024717 - 1025610 989 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 917 479 Op 4 . + CDS 1025655 - 1026164 178 ## PROTEIN SUPPORTED gi|227984558|ref|ZP_04031803.1| acetyltransferase, ribosomal protein N-acetylase 918 480 Op 1 6/0.131 - CDS 1026213 - 1026986 261 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 919 480 Op 2 12/0.016 - CDS 1026996 - 1027709 773 ## COG4160 ABC-type arginine/histidine transport system, permease component 920 480 Op 3 12/0.016 - CDS 1027706 - 1028392 890 ## COG4215 ABC-type arginine transport system, permease component 921 480 Op 4 9/0.047 - CDS 1028481 - 1029263 1076 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 1029373 - 1029432 3.7 - Term 1029434 - 1029488 -0.0 922 481 Tu 1 5/0.212 - CDS 1029489 - 1030271 1041 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 1030417 - 1030476 3.0 923 482 Op 1 5/0.212 - CDS 1030562 - 1031131 785 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 924 482 Op 2 18/0.000 - CDS 1031221 - 1032738 1802 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 925 482 Op 3 7/0.083 - CDS 1032772 - 1033260 461 ## COG1286 Uncharacterized membrane protein, required for colicin V production - Prom 1033321 - 1033380 4.7 - Term 1033352 - 1033387 2.5 926 483 Op 1 7/0.083 - CDS 1033517 - 1034164 494 ## COG3147 Uncharacterized protein conserved in bacteria 927 483 Op 2 15/0.005 - CDS 1034193 - 1035374 1221 ## COG0285 Folylpolyglutamate synthase - Prom 1035453 - 1035512 3.2 - Term 1035486 - 1035521 3.4 928 484 Tu 1 . - CDS 1035532 - 1036437 1221 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 1036531 - 1036590 4.4 929 485 Op 1 5/0.212 - CDS 1036592 - 1037251 828 ## COG0586 Uncharacterized membrane-associated protein 930 485 Op 2 5/0.212 - CDS 1037280 - 1038092 773 ## COG0101 Pseudouridylate synthase 931 485 Op 3 5/0.212 - CDS 1038092 - 1039105 1352 ## COG0136 Aspartate-semialdehyde dehydrogenase - Term 1039119 - 1039160 8.5 932 485 Op 4 . - CDS 1039173 - 1040285 1185 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 1040388 - 1040447 1.8 + Prom 1040236 - 1040295 2.7 933 486 Tu 1 . + CDS 1040421 - 1041425 1069 ## ECL_03670 flagella biosynthesis regulator - Term 1041418 - 1041457 5.2 934 487 Op 1 3/0.435 - CDS 1041513 - 1042691 1612 ## COG0477 Permeases of the major facilitator superfamily - Term 1042706 - 1042740 5.9 935 487 Op 2 . - CDS 1042759 - 1043976 1503 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 1044012 - 1044071 5.2 936 488 Tu 1 . + CDS 1044135 - 1046132 1407 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 1046156 - 1046196 4.4 937 489 Op 1 . - CDS 1046187 - 1046462 420 ## Entcl_1400 YfcL protein 938 489 Op 2 5/0.212 - CDS 1046476 - 1047021 493 ## COG3101 Uncharacterized protein conserved in bacteria 939 489 Op 3 7/0.083 - CDS 1047021 - 1047830 911 ## COG0730 Predicted permeases 940 489 Op 4 7/0.083 - CDS 1047830 - 1048654 545 ## COG3770 Murein endopeptidase 941 489 Op 5 3/0.435 - CDS 1048657 - 1049742 1317 ## COG0082 Chorismate synthase 942 489 Op 6 . - CDS 1049803 - 1050735 1528 ## PROTEIN SUPPORTED gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase - Prom 1050768 - 1050827 2.4 + Prom 1050711 - 1050770 3.2 943 490 Tu 1 . + CDS 1050881 - 1051432 542 ## COG2840 Uncharacterized protein conserved in bacteria - Term 1051351 - 1051381 -1.0 944 491 Tu 1 . - CDS 1051480 - 1051950 427 ## COG2062 Phosphohistidine phosphatase SixA - Prom 1052077 - 1052136 7.2 - Term 1052024 - 1052068 0.2 945 492 Op 1 20/0.000 - CDS 1052175 - 1054322 1862 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 946 492 Op 2 3/0.435 - CDS 1054322 - 1055632 1388 ## COG0183 Acetyl-CoA acetyltransferase - Prom 1055656 - 1055715 3.3 - Term 1055769 - 1055813 7.2 947 493 Tu 1 . - CDS 1055871 - 1056155 413 ## COG3691 Uncharacterized protein conserved in bacteria - Prom 1056262 - 1056321 4.5 + Prom 1056441 - 1056500 8.1 948 494 Tu 1 . + CDS 1056528 - 1057811 1508 ## COG2067 Long-chain fatty acid transport protein + Term 1057824 - 1057866 11.4 - Term 1057812 - 1057854 11.4 949 495 Tu 1 . - CDS 1057856 - 1058608 1018 ## COG2853 Surface lipoprotein - Prom 1058684 - 1058743 4.2 + Prom 1058753 - 1058812 3.5 950 496 Tu 1 . + CDS 1058923 - 1059852 902 ## COG2116 Formate/nitrite family of transporters + Term 1059946 - 1060012 30.0 + TRNA 1059928 - 1059999 64.9 # Arg CCT 0 0 951 497 Tu 1 . + CDS 1060355 - 1061272 722 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 1061284 - 1061320 5.1 - Term 1061703 - 1061754 9.0 952 498 Tu 1 . - CDS 1061762 - 1062997 1270 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 1063090 - 1063149 3.1 + Prom 1063302 - 1063361 3.7 953 499 Op 1 9/0.047 + CDS 1063402 - 1065081 1950 ## COG3275 Putative regulator of cell autolysis 954 499 Op 2 . + CDS 1065095 - 1065826 723 ## COG3279 Response regulator of the LytR/AlgR family 955 500 Tu 1 . - CDS 1065862 - 1066827 1167 ## COG0837 Glucokinase - Prom 1066933 - 1066992 2.9 + Prom 1066797 - 1066856 3.5 956 501 Tu 1 . + CDS 1067033 - 1068268 1367 ## COG0038 Chloride channel protein EriC 957 502 Tu 1 . - CDS 1068269 - 1069927 1604 ## COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes - Prom 1070057 - 1070116 1.6 + Prom 1069996 - 1070055 4.4 958 503 Tu 1 . + CDS 1070114 - 1071112 871 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Prom 1071140 - 1071199 3.7 959 504 Tu 1 . + CDS 1071239 - 1071586 236 ## ECL_03730 hypothetical protein + Term 1071603 - 1071631 1.0 - Term 1071591 - 1071617 -1.0 960 505 Tu 1 . - CDS 1071623 - 1072798 1387 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 1072868 - 1072927 5.1 961 506 Tu 1 . + CDS 1073207 - 1074394 1570 ## COG1972 Nucleoside permease + Term 1074415 - 1074446 3.2 - Term 1074403 - 1074434 2.4 962 507 Tu 1 . - CDS 1074440 - 1076593 1427 ## COG2200 FOG: EAL domain - Prom 1076784 - 1076843 6.2 - TRNA 1076841 - 1076916 86.5 # Ala GGC 0 0 - TRNA 1076957 - 1077032 87.8 # Ala GGC 0 0 + Prom 1077159 - 1077218 3.5 963 508 Op 1 . + CDS 1077250 - 1077612 329 ## ECL_03734 hypothetical protein 964 508 Op 2 . + CDS 1077635 - 1078000 75 ## ECL_03735 hypothetical protein + Term 1078014 - 1078044 3.0 - Term 1077992 - 1078040 13.8 965 509 Tu 1 . - CDS 1078052 - 1079467 1621 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 1079659 - 1079718 6.0 + TRNA 1079726 - 1079801 91.5 # Val TAC 0 0 + TRNA 1079843 - 1079918 92.9 # Val TAC 0 0 + TRNA 1079949 - 1080024 92.9 # Val TAC 0 0 + TRNA 1080029 - 1080104 99.5 # Lys TTT 0 0 + Prom 1079951 - 1080010 79.2 966 510 Tu 1 . + CDS 1080242 - 1080583 443 ## CKO_00388 hypothetical protein - Term 1080407 - 1080445 -0.1 967 511 Tu 1 . - CDS 1080574 - 1081515 676 ## COG0583 Transcriptional regulator - Prom 1081541 - 1081600 3.8 + Prom 1081474 - 1081533 5.0 968 512 Tu 1 . + CDS 1081605 - 1082600 945 ## COG0385 Predicted Na+-dependent transporter + Term 1082611 - 1082650 5.5 - Term 1082552 - 1082590 4.7 969 513 Op 1 3/0.435 - CDS 1082597 - 1082812 183 ## COG3530 Uncharacterized protein conserved in bacteria 970 513 Op 2 7/0.083 - CDS 1082814 - 1084829 2052 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 1084840 - 1084868 1.3 971 513 Op 3 . - CDS 1084898 - 1085890 751 ## COG3115 Cell division protein - Prom 1086069 - 1086128 3.6 + Prom 1085847 - 1085906 2.1 972 514 Tu 1 8/0.052 + CDS 1086123 - 1086884 835 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis + Term 1086904 - 1086936 4.1 + Prom 1086957 - 1087016 3.2 973 515 Tu 1 6/0.131 + CDS 1087048 - 1088019 706 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 1088048 - 1088075 0.1 + Prom 1088179 - 1088238 4.3 974 516 Op 1 25/0.000 + CDS 1088337 - 1088594 355 ## COG1925 Phosphotransferase system, HPr-related proteins 975 516 Op 2 10/0.036 + CDS 1088640 - 1090367 2022 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 976 516 Op 3 . + CDS 1090408 - 1090917 743 ## COG2190 Phosphotransferase system IIA components + Term 1090931 - 1090971 4.0 - Term 1090927 - 1090952 -0.5 977 517 Op 1 . - CDS 1090962 - 1091798 966 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 978 517 Op 2 5/0.212 - CDS 1091804 - 1092724 546 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 1092744 - 1092803 5.2 979 518 Op 1 17/0.000 - CDS 1092834 - 1093928 1452 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 980 518 Op 2 17/0.000 - CDS 1093918 - 1094793 1032 ## COG4208 ABC-type sulfate transport system, permease component 981 518 Op 3 7/0.083 - CDS 1094793 - 1095626 1013 ## COG0555 ABC-type sulfate transport system, permease component 982 518 Op 4 . - CDS 1095626 - 1096639 1430 ## COG4150 ABC-type sulfate transport system, periplasmic component - Prom 1096659 - 1096718 5.4 - Term 1096727 - 1096770 3.1 983 519 Op 1 . - CDS 1096802 - 1097701 1140 ## COG2837 Predicted iron-dependent peroxidase - Term 1097710 - 1097739 2.1 984 519 Op 2 . - CDS 1097794 - 1098369 745 ## Ent638_2953 hypothetical protein 985 519 Op 3 . - CDS 1098433 - 1098882 258 ## ECL_03756 hypothetical protein 986 519 Op 4 . - CDS 1098869 - 1099294 573 ## COG0456 Acetyltransferases - Prom 1099480 - 1099539 4.3 + Prom 1099375 - 1099434 3.7 987 520 Op 1 4/0.342 + CDS 1099507 - 1100382 938 ## COG0860 N-acetylmuramoyl-L-alanine amidase 988 520 Op 2 . + CDS 1100382 - 1101281 1163 ## COG0408 Coproporphyrinogen III oxidase + Term 1101353 - 1101386 3.5 - Term 1101215 - 1101245 3.0 989 521 Tu 1 . - CDS 1101361 - 1103640 3056 ## COG0281 Malic enzyme - Prom 1103763 - 1103822 6.0 + Prom 1103722 - 1103781 5.1 990 522 Op 1 13/0.014 + CDS 1103927 - 1104877 1218 ## COG0176 Transaldolase 991 522 Op 2 . + CDS 1104897 - 1106885 2955 ## COG0021 Transketolase + Term 1106894 - 1106943 1.1 992 523 Tu 1 . - CDS 1106966 - 1107850 915 ## ECL_03763 hypothetical protein - Term 1107921 - 1107949 1.0 993 524 Op 1 3/0.435 - CDS 1108119 - 1108709 725 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 994 524 Op 2 . - CDS 1108777 - 1110753 1422 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 1110876 - 1110935 2.8 995 525 Op 1 . + CDS 1110637 - 1110909 128 ## gi|295097988|emb|CBK87078.1| hypothetical protein ENC_38080 996 525 Op 2 4/0.342 + CDS 1110957 - 1112600 1731 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific + Prom 1112638 - 1112697 2.0 997 526 Tu 1 . + CDS 1112742 - 1115855 3664 ## COG0841 Cation/multidrug efflux pump + Term 1115874 - 1115904 3.4 + Prom 1116295 - 1116354 4.6 998 527 Op 1 9/0.047 + CDS 1116413 - 1116769 259 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 999 527 Op 2 . + CDS 1116773 - 1117900 1228 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1000 527 Op 3 . + CDS 1117925 - 1118122 238 ## ECs5496 hypothetical protein + Term 1118146 - 1118182 4.0 - Term 1118081 - 1118113 -1.0 1001 528 Tu 1 . - CDS 1118220 - 1118915 796 ## COG0400 Predicted esterase 1002 529 Op 1 4/0.342 - CDS 1118989 - 1120935 1187 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase 1003 529 Op 2 5/0.212 - CDS 1120935 - 1121804 814 ## COG2321 Predicted metalloprotease - Prom 1121824 - 1121883 4.3 - Term 1121876 - 1121913 8.0 1004 530 Tu 1 . - CDS 1121925 - 1122638 1077 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 1122675 - 1122734 6.9 - Term 1122709 - 1122743 5.0 1005 531 Op 1 9/0.047 - CDS 1122748 - 1123782 1280 ## COG3317 Uncharacterized lipoprotein 1006 531 Op 2 . - CDS 1123799 - 1124677 815 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 1124701 - 1124760 2.5 + Prom 1124735 - 1124794 4.4 1007 532 Op 1 4/0.342 + CDS 1124949 - 1125392 406 ## COG2716 Glycine cleavage system regulatory protein 1008 532 Op 2 . + CDS 1125392 - 1125862 581 ## COG1225 Peroxiredoxin - Term 1125808 - 1125835 0.5 1009 533 Tu 1 . - CDS 1125943 - 1127013 1641 ## COG0628 Predicted permease - Prom 1127210 - 1127269 2.3 + Prom 1127107 - 1127166 2.6 1010 534 Op 1 6/0.131 + CDS 1127234 - 1128697 1756 ## COG4783 Putative Zn-dependent protease, contains TPR repeats 1011 534 Op 2 . + CDS 1128711 - 1129067 532 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 1012 535 Tu 1 . - CDS 1129064 - 1129888 695 ## ECL_03782 hypothetical protein - Prom 1129916 - 1129975 1.7 + Prom 1129949 - 1130008 1.6 1013 536 Op 1 . + CDS 1130036 - 1131355 1847 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 1014 536 Op 2 . + CDS 1131359 - 1132315 1250 ## COG1446 Asparaginase 1015 536 Op 3 . + CDS 1132315 - 1133733 1322 ## COG0260 Leucyl aminopeptidase - Term 1133504 - 1133571 1.2 1016 537 Tu 1 . - CDS 1133820 - 1134413 653 ## COG0593 ATPase involved in DNA replication initiation - Prom 1134554 - 1134613 4.2 - Term 1134577 - 1134609 5.0 1017 538 Op 1 5/0.212 - CDS 1134618 - 1135907 1032 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 1135927 - 1135986 3.9 - Term 1135938 - 1135974 4.9 1018 538 Op 2 . - CDS 1135990 - 1136616 978 ## COG0035 Uracil phosphoribosyltransferase - Prom 1136652 - 1136711 5.0 - Term 1136715 - 1136746 2.4 1019 539 Tu 1 . - CDS 1136833 - 1138263 1812 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 1138437 - 1138496 3.9 + Prom 1138429 - 1138488 3.9 1020 540 Op 1 21/0.000 + CDS 1138530 - 1139567 1240 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 1021 540 Op 2 . + CDS 1139564 - 1140205 828 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 1022 540 Op 3 . + CDS 1140189 - 1140428 93 ## 1023 540 Op 4 11/0.023 + CDS 1140428 - 1142488 2648 ## COG0855 Polyphosphate kinase 1024 540 Op 5 . + CDS 1142492 - 1144030 2003 ## COG0248 Exopolyphosphatase + Term 1144119 - 1144161 6.4 - Term 1144007 - 1144034 -0.1 1025 541 Tu 1 . - CDS 1144035 - 1146275 2087 ## COG2200 FOG: EAL domain - Prom 1146471 - 1146530 4.7 1026 542 Tu 1 . - CDS 1146539 - 1146757 63 ## EC55989_2789 hypothetical protein + Prom 1146460 - 1146519 6.1 1027 543 Tu 1 . + CDS 1146674 - 1146814 78 ## ECL_03796 hypothetical protein 1028 544 Tu 1 . - CDS 1146846 - 1147571 256 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 1147621 - 1147680 2.1 1029 545 Op 1 . + CDS 1147784 - 1148245 521 ## ECL_03798 hypothetical protein 1030 545 Op 2 . + CDS 1148255 - 1149001 570 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 1031 546 Tu 1 . - CDS 1149131 - 1149967 609 ## COG3713 Outer membrane protein V - Prom 1150171 - 1150230 3.2 + Prom 1150061 - 1150120 1.7 1032 547 Op 1 40/0.000 + CDS 1150171 - 1150848 377 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1033 547 Op 2 . + CDS 1150959 - 1152236 898 ## COG0642 Signal transduction histidine kinase + Term 1152247 - 1152292 0.5 + Prom 1152282 - 1152341 5.9 1034 548 Tu 1 . + CDS 1152404 - 1152883 484 ## COG1959 Predicted transcriptional regulator + Term 1152908 - 1152942 3.5 - Term 1152896 - 1152930 3.5 1035 549 Op 1 27/0.000 - CDS 1152951 - 1156103 3937 ## COG0841 Cation/multidrug efflux pump 1036 549 Op 2 . - CDS 1156127 - 1157302 1068 ## COG0845 Membrane-fusion protein - Prom 1157440 - 1157499 4.3 + Prom 1157426 - 1157485 5.2 1037 550 Tu 1 . + CDS 1157640 - 1157993 332 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 1158017 - 1158060 9.5 - Term 1158005 - 1158047 9.3 1038 551 Tu 1 . - CDS 1158118 - 1158441 228 ## SeAg_B2655 SEC-C motif domain-containing protein - Prom 1158462 - 1158521 3.4 - Term 1158525 - 1158564 -1.0 1039 552 Tu 1 . - CDS 1158727 - 1159044 182 ## SC2506 hypothetical protein + Prom 1159442 - 1159501 5.7 1040 553 Tu 1 . + CDS 1159526 - 1160041 3 ## BC1002_2981 hypothetical protein + Term 1160045 - 1160081 -0.8 + Prom 1160097 - 1160156 9.0 1041 554 Tu 1 . + CDS 1160293 - 1160784 240 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Term 1160855 - 1160885 2.1 1042 555 Op 1 13/0.014 - CDS 1160935 - 1162512 2191 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Term 1162536 - 1162569 7.5 1043 555 Op 2 . - CDS 1162579 - 1164045 1875 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 1164080 - 1164139 7.5 + Prom 1164110 - 1164169 6.3 1044 556 Op 1 . + CDS 1164204 - 1165577 1250 ## COG1570 Exonuclease VII, large subunit 1045 556 Op 2 . + CDS 1165636 - 1166655 1241 ## COG3227 Zinc metalloprotease (elastase) 1046 556 Op 3 . + CDS 1166655 - 1167005 452 ## ECL_03849 hypothetical protein 1047 557 Op 1 . - CDS 1167002 - 1167223 257 ## Entcl_1249 hypothetical protein 1048 557 Op 2 . - CDS 1167274 - 1168308 917 ## Entcl_1248 oxidoreductase domain-containing protein - Term 1168317 - 1168358 8.0 1049 557 Op 3 . - CDS 1168367 - 1169911 2236 ## COG3104 Dipeptide/tripeptide permease - Prom 1170051 - 1170110 2.5 - Term 1170195 - 1170235 5.0 1050 558 Op 1 . - CDS 1170250 - 1170711 401 ## ASA_2549 hypothetical protein 1051 558 Op 2 . - CDS 1170768 - 1171766 797 ## COG3203 Outer membrane protein (porin) - Prom 1171805 - 1171864 2.7 1052 559 Tu 1 . - CDS 1171994 - 1174633 1497 ## COG5295 Autotransporter adhesin 1053 560 Tu 1 . - CDS 1174739 - 1174945 143 ## - Prom 1175145 - 1175204 6.9 - Term 1175599 - 1175628 -0.9 1054 561 Tu 1 . - CDS 1175666 - 1177138 1958 ## COG1160 Predicted GTPases - Prom 1177176 - 1177235 1.8 - Term 1177183 - 1177229 8.4 1055 562 Op 1 9/0.047 - CDS 1177251 - 1178429 1295 ## COG1520 FOG: WD40-like repeat 1056 562 Op 2 12/0.016 - CDS 1178440 - 1179111 725 ## COG2976 Uncharacterized protein conserved in bacteria 1057 562 Op 3 11/0.023 - CDS 1179074 - 1180318 1457 ## COG0124 Histidyl-tRNA synthetase - Prom 1180356 - 1180415 3.3 - Term 1180392 - 1180424 4.9 1058 563 Op 1 10/0.036 - CDS 1180430 - 1181548 1031 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 1059 563 Op 2 5/0.212 - CDS 1181575 - 1182576 736 ## COG1426 Uncharacterized protein conserved in bacteria - Prom 1182794 - 1182853 3.9 1060 564 Tu 1 . - CDS 1182868 - 1184034 1435 ## COG0820 Predicted Fe-S-cluster redox enzyme - Prom 1184119 - 1184178 2.5 - Term 1184078 - 1184121 0.2 1061 565 Tu 1 . - CDS 1184182 - 1184613 461 ## COG0105 Nucleoside diphosphate kinase - Prom 1184665 - 1184724 4.2 1062 566 Op 1 3/0.435 - CDS 1184738 - 1185613 155 ## COG1145 Ferredoxin 1063 566 Op 2 9/0.047 - CDS 1185613 - 1186392 867 ## COG3302 DMSO reductase anchor subunit 1064 566 Op 3 16/0.000 - CDS 1186385 - 1187014 482 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 1065 566 Op 4 2/0.532 - CDS 1187011 - 1189389 2300 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 1189417 - 1189476 3.4 1066 567 Op 1 7/0.083 - CDS 1189478 - 1191805 1876 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC 1067 567 Op 2 . - CDS 1191807 - 1196759 5247 ## COG2373 Large extracellular alpha-helical protein - Prom 1196801 - 1196860 1.7 + Prom 1196906 - 1196965 3.6 1068 568 Op 1 2/0.532 + CDS 1197048 - 1198592 1967 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1069 568 Op 2 . + CDS 1198605 - 1199972 1842 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 1200003 - 1200043 5.4 1070 569 Op 1 . + CDS 1200063 - 1200908 857 ## COG2897 Rhodanese-related sulfurtransferase 1071 569 Op 2 . + CDS 1200908 - 1201678 844 ## COG1737 Transcriptional regulators - Term 1201659 - 1201689 4.3 1072 570 Tu 1 . - CDS 1201696 - 1202472 1083 ## ECL_03871 enhanced serine sensitivity protein SseB - Term 1202530 - 1202564 8.3 1073 571 Op 1 2/0.532 - CDS 1202584 - 1203870 2043 ## COG0260 Leucyl aminopeptidase - Term 1203880 - 1203914 6.1 1074 571 Op 2 9/0.047 - CDS 1203924 - 1204124 268 ## COG2975 Uncharacterized protein conserved in bacteria 1075 571 Op 3 13/0.014 - CDS 1204126 - 1204461 414 ## COG0633 Ferredoxin 1076 571 Op 4 11/0.023 - CDS 1204463 - 1206313 2483 ## COG0443 Molecular chaperone 1077 571 Op 5 10/0.036 - CDS 1206328 - 1206843 579 ## COG1076 DnaJ-domain-containing proteins 1 - Term 1206863 - 1206905 7.3 1078 572 Op 1 14/0.011 - CDS 1206923 - 1207246 436 ## COG0316 Uncharacterized conserved protein 1079 572 Op 2 20/0.000 - CDS 1207260 - 1207646 534 ## COG0822 NifU homolog involved in Fe-S cluster formation 1080 572 Op 3 13/0.014 - CDS 1207671 - 1208885 1652 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Term 1208886 - 1208921 -0.8 1081 573 Tu 1 . - CDS 1209003 - 1209494 575 ## COG1959 Predicted transcriptional regulator - Prom 1209529 - 1209588 4.2 - Term 1209693 - 1209724 -0.9 1082 574 Tu 1 . - CDS 1209731 - 1210456 931 ## COG0565 rRNA methylase + Prom 1210492 - 1210551 3.1 1083 575 Tu 1 . + CDS 1210589 - 1211392 985 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 1084 576 Op 1 9/0.047 - CDS 1211452 - 1212432 944 ## COG2215 ABC-type uncharacterized transport system, permease component 1085 576 Op 2 . - CDS 1212423 - 1213061 506 ## COG3683 ABC-type uncharacterized transport system, periplasmic component - Prom 1213166 - 1213225 1.9 + Prom 1213104 - 1213163 3.5 1086 577 Tu 1 . + CDS 1213187 - 1214464 1404 ## COG3711 Transcriptional antiterminator - Term 1214315 - 1214348 0.3 1087 578 Tu 1 . - CDS 1214465 - 1215604 1309 ## COG0477 Permeases of the major facilitator superfamily - Prom 1215642 - 1215701 5.2 + Prom 1215625 - 1215684 2.7 1088 579 Tu 1 . + CDS 1215777 - 1216199 570 ## COG2259 Predicted membrane protein + Term 1216204 - 1216246 6.9 - Term 1216200 - 1216227 1.5 1089 580 Op 1 . - CDS 1216254 - 1217507 1696 ## COG0112 Glycine/serine hydroxymethyltransferase 1090 580 Op 2 . - CDS 1217494 - 1217739 96 ## SC2550 hypothetical protein - Prom 1217770 - 1217829 2.0 + Prom 1217707 - 1217766 6.4 1091 581 Tu 1 . + CDS 1217812 - 1219002 1437 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 1218946 - 1218981 2.4 1092 582 Op 1 4/0.342 - CDS 1219083 - 1219421 527 ## COG0347 Nitrogen regulatory protein PII 1093 582 Op 2 . - CDS 1219502 - 1220839 1579 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 1094 582 Op 3 . - CDS 1220836 - 1221567 729 ## Ent638_3040 hypothetical protein 1095 582 Op 4 3/0.435 - CDS 1221585 - 1222970 1384 ## COG0642 Signal transduction histidine kinase - Term 1223489 - 1223528 8.1 1096 583 Tu 1 . - CDS 1223550 - 1227434 4999 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Prom 1227540 - 1227599 4.4 1097 584 Tu 1 . + CDS 1227705 - 1229255 1735 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Term 1228928 - 1228956 -1.0 1098 585 Op 1 2/0.532 - CDS 1229143 - 1229682 455 ## COG0590 Cytosine/adenosine deaminases 1099 585 Op 2 1/0.649 - CDS 1229707 - 1230342 673 ## COG0560 Phosphoserine phosphatase 1100 585 Op 3 9/0.047 - CDS 1230346 - 1231710 1744 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1101 585 Op 4 . - CDS 1231720 - 1232616 927 ## COG2103 Predicted sugar phosphate isomerase - Prom 1232637 - 1232696 5.6 + Prom 1232610 - 1232669 5.3 1102 586 Op 1 1/0.649 + CDS 1232735 - 1233583 832 ## COG1737 Transcriptional regulators 1103 586 Op 2 . + CDS 1233640 - 1233900 262 ## COG1145 Ferredoxin - Term 1233729 - 1233773 5.8 1104 587 Op 1 8/0.052 - CDS 1233897 - 1234277 437 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 1105 587 Op 2 9/0.047 - CDS 1234277 - 1235008 1076 ## COG0854 Pyridoxal phosphate biosynthesis protein 1106 587 Op 3 16/0.000 - CDS 1235084 - 1235791 673 ## COG1381 Recombinational DNA repair protein (RecF pathway) 1107 587 Op 4 18/0.000 - CDS 1235809 - 1236714 1143 ## COG1159 GTPase 1108 587 Op 5 13/0.014 - CDS 1236711 - 1237391 701 ## COG0571 dsRNA-specific ribonuclease - Prom 1237502 - 1237561 1.9 - Term 1237556 - 1237598 8.8 1109 588 Op 1 14/0.011 - CDS 1237615 - 1238589 1162 ## COG0681 Signal peptidase I 1110 588 Op 2 . - CDS 1238605 - 1240410 2340 ## COG0481 Membrane GTPase LepA - Prom 1240578 - 1240637 4.5 + Prom 1240359 - 1240418 3.3 1111 589 Tu 1 . + CDS 1240569 - 1241051 -341 ## 1112 590 Tu 1 . - CDS 1241382 - 1241936 -99 ## COG0675 Transposase and inactivated derivatives - Prom 1242055 - 1242114 1.9 - Term 1242406 - 1242445 2.7 1113 591 Tu 1 . - CDS 1242459 - 1244474 1682 ## COG1344 Flagellin and related hook-associated proteins - Prom 1244587 - 1244646 3.1 1114 592 Tu 1 . - CDS 1245783 - 1246229 82 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 1115 593 Tu 1 . + CDS 1246695 - 1247219 350 ## PputGB1_3390 hypothetical protein 1116 594 Tu 1 . - CDS 1247864 - 1248262 268 ## Kvar_2100 terminase small subunit - Prom 1248373 - 1248432 2.1 - Term 1248269 - 1248304 4.0 1117 595 Tu 1 . - CDS 1248482 - 1248712 115 ## gi|295096348|emb|CBK85438.1| hypothetical protein ENC_17230 - Prom 1248849 - 1248908 3.2 1118 596 Tu 1 . - CDS 1248918 - 1249130 113 ## gi|295096349|emb|CBK85439.1| hypothetical protein ENC_17240 - Prom 1249214 - 1249273 4.6 + Prom 1249198 - 1249257 2.4 1119 597 Tu 1 . + CDS 1249307 - 1249618 159 ## + Term 1249856 - 1249907 -0.8 1120 598 Tu 1 . - CDS 1249808 - 1250152 206 ## ECL_01680 hypothetical protein - Prom 1250345 - 1250404 80.4 1121 599 Op 1 . - CDS 1250912 - 1251127 109 ## KP1_2176 hypothetical protein 1122 599 Op 2 . - CDS 1251180 - 1251566 240 ## ESA_01017 hypothetical protein - Prom 1251605 - 1251664 8.2 - Term 1251707 - 1251736 1.1 1123 600 Tu 1 . - CDS 1251745 - 1252716 471 ## SARI_02670 hypothetical protein - Prom 1252750 - 1252809 1.6 + Prom 1253102 - 1253161 3.6 1124 601 Tu 1 . + CDS 1253223 - 1253594 87 ## + Term 1253612 - 1253639 -0.9 - Term 1253600 - 1253627 -0.9 1125 602 Tu 1 . - CDS 1253738 - 1254550 318 ## STM0903 chaperone 1126 603 Tu 1 . - CDS 1254681 - 1254872 76 ## Entcl_1853 endodeoxyribonuclease RusA - Prom 1254903 - 1254962 2.1 1127 604 Tu 1 . - CDS 1255034 - 1255315 165 ## Ent638_0789 hypothetical protein 1128 605 Tu 1 . - CDS 1255524 - 1256123 566 ## SPAB_00993 hypothetical protein - Prom 1256175 - 1256234 2.6 1129 606 Tu 1 . - CDS 1256523 - 1256756 151 ## Entcl_1850 DinI family protein - Prom 1256828 - 1256887 6.4 - Term 1256857 - 1256886 0.4 1130 607 Tu 1 . - CDS 1256913 - 1257293 76 ## - Prom 1257340 - 1257399 4.2 + Prom 1257683 - 1257742 3.4 1131 608 Tu 1 . + CDS 1257767 - 1258147 147 ## Kvar_2003 hypothetical protein - Term 1258619 - 1258661 2.9 1132 609 Op 1 . - CDS 1258725 - 1259144 184 ## CKO_01898 hypothetical protein 1133 609 Op 2 . - CDS 1259141 - 1259401 258 ## CKO_01899 hypothetical protein 1134 609 Op 3 . - CDS 1259405 - 1260091 514 ## CKO_01900 hypothetical protein 1135 609 Op 4 . - CDS 1260108 - 1260860 516 ## COG1484 DNA replication protein 1136 609 Op 5 . - CDS 1260863 - 1261759 234 ## KPN_01390 hypothetical protein - Prom 1261938 - 1261997 2.0 - Term 1261831 - 1261869 4.4 1137 610 Op 1 . - CDS 1262043 - 1262291 66 ## CKO_01903 hypothetical protein 1138 610 Op 2 . - CDS 1262307 - 1262849 489 ## CKO_01904 hypothetical protein 1139 610 Op 3 . - CDS 1262852 - 1263082 158 ## ECO103_2278 putative antirepressor protein Cro - Prom 1263102 - 1263161 5.7 1140 611 Tu 1 . + CDS 1263194 - 1263595 297 ## COG1396 Predicted transcriptional regulators + Term 1263620 - 1263650 1.0 + Prom 1263614 - 1263673 6.2 1141 612 Tu 1 . + CDS 1263792 - 1263998 285 ## ECIAI1_0759 putative prophage Kil protein 1142 613 Op 1 . + CDS 1264311 - 1267730 2391 ## SPC_1011 exodeoxyribonuclease 1143 613 Op 2 . + CDS 1267742 - 1268854 731 ## Kvar_2056 DNA single-strand annealing protein RecT-like protein 1144 613 Op 3 . + CDS 1268889 - 1269512 362 ## Rahaq_4972 hypothetical protein 1145 613 Op 4 . + CDS 1269499 - 1269741 220 ## KPN_01378 hypothetical protein 1146 613 Op 5 . + CDS 1269788 - 1270072 157 ## STM2635 excisionase-like protein 1147 614 Tu 1 . - CDS 1270050 - 1271279 550 ## COG0582 Integrase 1148 615 Op 1 8/0.052 - CDS 1271710 - 1272186 344 ## COG3086 Positive regulator of sigma E activity 1149 615 Op 2 10/0.036 - CDS 1272183 - 1273136 855 ## COG3026 Negative regulator of sigma E activity 1150 615 Op 3 11/0.023 - CDS 1273136 - 1273786 593 ## COG3073 Negative regulator of sigma E activity 1151 615 Op 4 . - CDS 1273818 - 1274393 319 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 1274732 - 1274791 3.0 1152 616 Tu 1 . + CDS 1274819 - 1276438 1506 ## COG0029 Aspartate oxidase 1153 617 Tu 1 . - CDS 1276423 - 1277160 522 ## COG4123 Predicted O-methyltransferase - Prom 1277185 - 1277244 2.3 + Prom 1277213 - 1277272 2.5 1154 618 Tu 1 . + CDS 1277293 - 1278621 1301 ## COG0513 Superfamily II DNA and RNA helicases + Term 1278627 - 1278655 3.0 - Term 1278607 - 1278650 8.1 1155 619 Tu 1 . - CDS 1278673 - 1279056 521 ## COG3445 Acid-induced glycyl radical enzyme - Prom 1279127 - 1279186 4.2 + Prom 1279092 - 1279151 4.2 1156 620 Tu 1 . + CDS 1279372 - 1280061 630 ## COG0692 Uracil DNA glycosylase + Term 1280063 - 1280108 8.5 1157 621 Tu 1 . - CDS 1280100 - 1281185 1153 ## COG0566 rRNA methylases - Prom 1281374 - 1281433 2.5 + Prom 1281281 - 1281340 4.4 1158 622 Op 1 3/0.435 + CDS 1281390 - 1281809 183 ## PROTEIN SUPPORTED gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein + Term 1281816 - 1281848 6.3 1159 622 Op 2 3/0.435 + CDS 1281879 - 1282577 452 ## COG3148 Uncharacterized conserved protein 1160 622 Op 3 3/0.435 + CDS 1282613 - 1285276 2559 ## COG1042 Acyl-CoA synthetase (NDP forming) 1161 623 Op 1 3/0.435 + CDS 1285386 - 1286741 1141 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 1286748 - 1286778 3.4 1162 623 Op 2 . + CDS 1286786 - 1287109 173 ## COG5544 Predicted periplasmic lipoprotein + Term 1287305 - 1287333 0.7 1163 624 Tu 1 . - CDS 1287106 - 1288413 1080 ## COG0477 Permeases of the major facilitator superfamily - Prom 1288461 - 1288520 2.9 1164 625 Tu 1 . - CDS 1288565 - 1288918 176 ## Ctu_31770 hypothetical protein - Prom 1289041 - 1289100 7.6 - 5S_RRNA 1289143 - 1289262 99.0 # CU468135 [D:168822..168941] # 5S ribosomal RNA # Erwinia tasmaniensis Et1/99 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia. - Term 1292774 - 1292804 2.1 1165 626 Tu 1 . - CDS 1292822 - 1295395 1863 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 1295446 - 1295505 5.2 - Term 1295428 - 1295472 0.2 1166 627 Op 1 11/0.023 - CDS 1295525 - 1296256 522 ## COG1496 Uncharacterized conserved protein 1167 627 Op 2 . - CDS 1296253 - 1297233 911 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 1297285 - 1297344 3.9 + Prom 1297244 - 1297303 2.8 1168 628 Tu 1 . + CDS 1297365 - 1298102 875 ## COG4105 DNA uptake lipoprotein + Term 1298121 - 1298153 5.0 + Prom 1298108 - 1298167 4.3 1169 629 Tu 1 . + CDS 1298370 - 1298711 558 ## PROTEIN SUPPORTED gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA + Term 1298732 - 1298768 3.0 + Prom 1298737 - 1298796 5.9 1170 630 Tu 1 . + CDS 1298971 - 1300131 1383 ## COG0077 Prephenate dehydratase - Term 1299851 - 1299895 2.0 1171 631 Tu 1 1/0.649 - CDS 1300128 - 1301000 742 ## COG3386 Gluconolactonase - Term 1301009 - 1301043 5.3 1172 632 Op 1 7/0.083 - CDS 1301062 - 1302183 1229 ## COG0287 Prephenate dehydrogenase 1173 632 Op 2 . - CDS 1302194 - 1303264 1098 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 1303376 - 1303435 4.0 + Prom 1303641 - 1303700 3.8 1174 633 Op 1 . + CDS 1303744 - 1304280 199 ## ECL_03934 hypothetical protein 1175 633 Op 2 6/0.131 + CDS 1304357 - 1305493 1009 ## COG2199 FOG: GGDEF domain 1176 634 Tu 1 . + CDS 1305608 - 1305991 316 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Term 1305903 - 1305945 2.1 1177 635 Op 1 . - CDS 1305994 - 1307364 1126 ## COG3182 Uncharacterized iron-regulated membrane protein 1178 635 Op 2 . - CDS 1307403 - 1307807 185 ## ECL_03938 hypothetical protein - Prom 1307828 - 1307887 3.6 - Term 1307873 - 1307914 8.6 1179 636 Op 1 33/0.000 - CDS 1307940 - 1308287 573 ## PROTEIN SUPPORTED gi|152971456|ref|YP_001336565.1| 50S ribosomal protein L19 1180 636 Op 2 30/0.000 - CDS 1308331 - 1309098 470 ## COG0336 tRNA-(guanine-N1)-methyltransferase 1181 636 Op 3 12/0.016 - CDS 1309129 - 1309665 198 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 1182 636 Op 4 . - CDS 1309665 - 1309694 45 ## PROTEIN SUPPORTED gi|213022766|ref|ZP_03337213.1| 30S ribosomal protein S16 1183 636 Op 5 23/0.000 - CDS 1309684 - 1309932 401 ## PROTEIN SUPPORTED gi|152971459|ref|YP_001336568.1| 30S ribosomal protein S16 - Prom 1310002 - 1310061 5.4 - Term 1310020 - 1310057 1.0 1184 636 Op 6 . - CDS 1310069 - 1311430 1903 ## COG0541 Signal recognition particle GTPase - Prom 1311487 - 1311546 5.2 + Prom 1311507 - 1311566 5.5 1185 637 Op 1 4/0.342 + CDS 1311597 - 1312388 886 ## COG4137 ABC-type uncharacterized transport system, permease component 1186 637 Op 2 . + CDS 1312453 - 1313694 1440 ## COG4536 Putative Mg2+ and Co2+ transporter CorB + Term 1313832 - 1313860 1.6 - Term 1313631 - 1313677 -0.4 1187 638 Tu 1 . - CDS 1313746 - 1314339 831 ## COG0576 Molecular chaperone GrpE (heat shock protein) - Prom 1314377 - 1314436 2.4 + Prom 1314383 - 1314442 3.1 1188 639 Op 1 17/0.000 + CDS 1314462 - 1315340 833 ## COG0061 Predicted sugar kinase + Prom 1315342 - 1315401 4.0 1189 639 Op 2 5/0.212 + CDS 1315426 - 1317087 1822 ## COG0497 ATPase involved in DNA repair + Prom 1317114 - 1317173 3.3 1190 640 Tu 1 . + CDS 1317226 - 1317564 435 ## COG2913 Small protein A (tmRNA-binding) + Term 1317576 - 1317625 10.4 - Term 1317575 - 1317603 2.3 1191 641 Op 1 9/0.047 - CDS 1317625 - 1317912 306 ## COG2914 Uncharacterized protein conserved in bacteria 1192 641 Op 2 . - CDS 1317902 - 1318378 587 ## COG2867 Oligoketide cyclase/lipid transport protein - Prom 1318463 - 1318522 2.2 + Prom 1318416 - 1318475 3.9 1193 642 Tu 1 . + CDS 1318496 - 1318978 591 ## COG0691 tmRNA-binding protein + Term 1318984 - 1319026 1.1 - Term 1319892 - 1319936 -0.8 1194 643 Op 1 4/0.342 - CDS 1320154 - 1320789 684 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 1195 643 Op 2 1/0.649 - CDS 1320813 - 1321376 558 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 1196 643 Op 3 1/0.649 - CDS 1321376 - 1322218 1100 ## COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes 1197 643 Op 4 . - CDS 1322215 - 1323675 1787 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 1323879 - 1323938 1.9 + Prom 1323836 - 1323895 2.3 1198 644 Tu 1 . + CDS 1323963 - 1325642 1398 ## COG4533 ABC-type uncharacterized transport system, periplasmic component 1199 645 Tu 1 . - CDS 1327362 - 1327601 138 ## t0349 hypothetical protein - Prom 1327675 - 1327734 3.6 1200 646 Tu 1 . - CDS 1327849 - 1328076 89 ## COG3813 Uncharacterized protein conserved in bacteria - Prom 1328270 - 1328329 4.7 + Prom 1328731 - 1328790 1.8 1201 647 Op 1 . + CDS 1328854 - 1330092 837 ## COG0524 Sugar kinases, ribokinase family 1202 647 Op 2 7/0.083 + CDS 1330160 - 1331137 1175 ## COG4209 ABC-type polysaccharide transport system, permease component 1203 647 Op 3 . + CDS 1331137 - 1332036 1210 ## COG0395 ABC-type sugar transport system, permease component 1204 647 Op 4 . + CDS 1332051 - 1332404 595 ## Spirs_3329 sugar ABC transporter periplasmic protein 1205 647 Op 5 . + CDS 1332477 - 1333451 979 ## COG1653 ABC-type sugar transport system, periplasmic component 1206 647 Op 6 . + CDS 1333448 - 1334659 1265 ## COG1397 ADP-ribosylglycohydrolase 1207 647 Op 7 . + CDS 1334661 - 1335716 1273 ## COG3839 ABC-type sugar transport systems, ATPase components + Term 1335731 - 1335764 5.2 - Term 1335774 - 1335809 3.4 1208 648 Tu 1 . - CDS 1335814 - 1337130 882 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Term 1337143 - 1337175 5.0 1209 649 Op 1 . - CDS 1337183 - 1338478 1509 ## COG0141 Histidinol dehydrogenase 1210 649 Op 2 . - CDS 1338479 - 1339621 1174 ## Smed_4298 hypothetical protein - Prom 1339641 - 1339700 2.5 1211 650 Op 1 . - CDS 1339728 - 1340699 947 ## RD1_3943 hypothetical protein 1212 650 Op 2 . - CDS 1340696 - 1341766 1032 ## COG1609 Transcriptional regulators - Prom 1341901 - 1341960 3.1 + Prom 1341833 - 1341892 7.0 1213 651 Op 1 . + CDS 1342075 - 1343313 1566 ## COG0477 Permeases of the major facilitator superfamily 1214 651 Op 2 1/0.649 + CDS 1343389 - 1344711 1362 ## COG0141 Histidinol dehydrogenase 1215 651 Op 3 3/0.435 + CDS 1344715 - 1345479 847 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1216 651 Op 4 . + CDS 1345488 - 1346231 599 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 1217 651 Op 5 . + CDS 1346306 - 1347004 748 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1218 651 Op 6 . + CDS 1347016 - 1348191 1065 ## Dshi_3139 cupin domain-containing protein + Term 1348216 - 1348259 1.4 + Prom 1348786 - 1348845 8.6 1219 652 Op 1 3/0.435 + CDS 1349058 - 1351151 1443 ## COG1404 Subtilisin-like serine proteases 1220 652 Op 2 . + CDS 1351007 - 1360480 9978 ## COG1404 Subtilisin-like serine proteases 1221 652 Op 3 3/0.435 + CDS 1360563 - 1361966 1748 ## COG1538 Outer membrane protein 1222 652 Op 4 13/0.014 + CDS 1361963 - 1364155 201 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 1223 652 Op 5 . + CDS 1364136 - 1365335 1254 ## COG0845 Membrane-fusion protein + Term 1365390 - 1365422 -0.4 - Term 1365329 - 1365369 5.4 1224 653 Op 1 . - CDS 1365402 - 1366583 1552 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 1225 653 Op 2 . - CDS 1366604 - 1367491 889 ## COG0583 Transcriptional regulator - Prom 1367524 - 1367583 9.2 + Prom 1367487 - 1367546 4.0 1226 654 Tu 1 . + CDS 1367589 - 1368191 854 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 1368219 - 1368262 1.5 1227 655 Op 1 3/0.435 - CDS 1368303 - 1369682 1641 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 1228 655 Op 2 . - CDS 1369684 - 1370640 1251 ## COG0549 Carbamate kinase 1229 656 Op 1 . - CDS 1370761 - 1372305 2101 ## COG2252 Permeases 1230 656 Op 2 . - CDS 1372317 - 1373732 2060 ## ECL_04000 hypothetical protein 1231 656 Op 3 . - CDS 1373732 - 1375273 1849 ## COG0074 Succinyl-CoA synthetase, alpha subunit - Term 1375289 - 1375333 1.0 1232 657 Tu 1 . - CDS 1375383 - 1375988 736 ## COG0666 FOG: Ankyrin repeat - Prom 1376017 - 1376076 3.6 + Prom 1376222 - 1376281 3.2 1233 658 Tu 1 . + CDS 1376309 - 1377238 981 ## COG0583 Transcriptional regulator 1234 659 Tu 1 . - CDS 1377235 - 1377393 112 ## COG0401 Uncharacterized homolog of Blt101 - Prom 1377417 - 1377476 5.6 + Prom 1377462 - 1377521 2.6 1235 660 Op 1 . + CDS 1377572 - 1378090 498 ## COG0607 Rhodanese-related sulfurtransferase + Prom 1378092 - 1378151 1.9 1236 660 Op 2 . + CDS 1378173 - 1378352 208 ## ECL_04006 hypothetical protein - Term 1378349 - 1378382 4.4 1237 661 Tu 1 . - CDS 1378390 - 1378794 436 ## COG2916 DNA-binding protein H-NS - Prom 1378830 - 1378889 2.1 + Prom 1379117 - 1379176 6.3 1238 662 Tu 1 . + CDS 1379291 - 1379740 486 ## CKO_04017 hypothetical protein 1239 663 Tu 1 . - CDS 1379773 - 1380117 311 ## ECL_04011 hypothetical protein - Prom 1380217 - 1380276 5.3 + Prom 1380181 - 1380240 2.3 1240 664 Tu 1 . + CDS 1380264 - 1380602 381 ## COG4575 Uncharacterized conserved protein + Term 1380616 - 1380653 8.6 + Prom 1380719 - 1380778 3.6 1241 665 Op 1 11/0.023 + CDS 1380846 - 1381085 212 ## COG0695 Glutaredoxin and related proteins 1242 665 Op 2 18/0.000 + CDS 1381133 - 1381492 309 ## COG1780 Protein involved in ribonucleotide reduction 1243 665 Op 3 24/0.000 + CDS 1381528 - 1383609 2433 ## COG0209 Ribonucleotide reductase, alpha subunit 1244 665 Op 4 . + CDS 1383619 - 1384296 577 ## COG0208 Ribonucleotide reductase, beta subunit 1245 665 Op 5 5/0.212 + CDS 1384296 - 1384577 438 ## COG0208 Ribonucleotide reductase, beta subunit + Term 1384669 - 1384710 9.3 + Prom 1384822 - 1384881 3.2 1246 666 Op 1 16/0.000 + CDS 1384911 - 1386113 1256 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 1247 666 Op 2 14/0.011 + CDS 1386106 - 1387170 1418 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 1248 666 Op 3 3/0.435 + CDS 1387180 - 1388175 1414 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Prom 1388272 - 1388331 6.5 1249 667 Tu 1 . + CDS 1388368 - 1389552 1334 ## COG0477 Permeases of the major facilitator superfamily + Term 1389567 - 1389609 5.0 + Prom 1389783 - 1389842 7.6 1250 668 Tu 1 . + CDS 1389867 - 1390397 639 ## COG1846 Transcriptional regulators + Term 1390445 - 1390480 4.8 + Prom 1390436 - 1390495 2.4 1251 669 Op 1 19/0.000 + CDS 1390527 - 1391699 1487 ## COG1566 Multidrug resistance efflux pump 1252 669 Op 2 1/0.649 + CDS 1391716 - 1393263 2029 ## COG0477 Permeases of the major facilitator superfamily 1253 670 Tu 1 . + CDS 1393462 - 1395117 1748 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 1254 671 Op 1 . - CDS 1395104 - 1395868 434 ## COG2207 AraC-type DNA-binding domain-containing proteins 1255 671 Op 2 6/0.131 - CDS 1395919 - 1396434 647 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 1396491 - 1396550 4.2 1256 672 Op 1 5/0.212 - CDS 1396588 - 1398132 1732 ## COG2918 Gamma-glutamylcysteine synthetase - Prom 1398155 - 1398214 2.6 1257 672 Op 2 6/0.131 - CDS 1398216 - 1398500 296 ## COG1238 Predicted membrane protein 1258 673 Tu 1 . - CDS 1398641 - 1399207 438 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 1399237 - 1399296 4.0 - TRNA 1399325 - 1399401 87.2 # Arg ACG 0 0 - TRNA 1399598 - 1399674 87.2 # Arg ACG 0 0 - TRNA 1399918 - 1400010 72.5 # Ser GCT 0 0 1259 674 Tu 1 . - CDS 1400353 - 1400538 204 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 - Prom 1400665 - 1400724 4.5 - Term 1400721 - 1400760 9.1 1260 675 Tu 1 . - CDS 1400780 - 1403407 3173 ## COG0013 Alanyl-tRNA synthetase 1261 676 Tu 1 14/0.011 - CDS 1403539 - 1404039 407 ## COG2137 Uncharacterized protein conserved in bacteria - Term 1404058 - 1404088 2.1 1262 677 Op 1 12/0.016 - CDS 1404109 - 1405167 1569 ## COG0468 RecA/RadA recombinase 1263 677 Op 2 . - CDS 1405257 - 1405754 295 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Term 1405842 - 1405873 3.2 1264 678 Op 1 12/0.016 - CDS 1405885 - 1406763 1003 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 1265 678 Op 2 42/0.000 - CDS 1406778 - 1407638 713 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 1266 678 Op 3 . - CDS 1407635 - 1408288 597 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 1267 678 Op 4 . - CDS 1408285 - 1408386 73 ## - Prom 1408407 - 1408466 4.2 - Term 1408510 - 1408556 3.2 1268 679 Tu 1 . - CDS 1408599 - 1409699 1307 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 1409863 - 1409922 2.1 + Prom 1409772 - 1409831 2.1 1269 680 Tu 1 . + CDS 1409889 - 1410854 1246 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation + Term 1410914 - 1410950 -0.6 - Term 1410759 - 1410802 3.0 1270 681 Tu 1 . - CDS 1410851 - 1412365 1646 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Prom 1412439 - 1412498 4.9 + Prom 1412378 - 1412437 6.3 1271 682 Op 1 5/0.212 + CDS 1412553 - 1414001 1862 ## COG0426 Uncharacterized flavoproteins 1272 682 Op 2 . + CDS 1413998 - 1415131 1286 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 1273 683 Op 1 . - CDS 1415245 - 1416267 1319 ## COG3376 High-affinity nickel permease 1274 683 Op 2 4/0.342 - CDS 1416269 - 1418485 1412 ## COG0068 Hydrogenase maturation factor 1275 683 Op 3 3/0.435 - CDS 1418492 - 1419052 602 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 1419097 - 1419156 6.2 - Term 1419119 - 1419162 11.0 1276 684 Tu 1 . - CDS 1419171 - 1420184 1229 ## COG1609 Transcriptional regulators - Prom 1420292 - 1420351 4.5 + Prom 1420317 - 1420376 3.8 1277 685 Op 1 8/0.052 + CDS 1420398 - 1421849 2148 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1278 685 Op 2 . + CDS 1421868 - 1423292 1991 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 1279 686 Op 1 . - CDS 1423364 - 1423804 565 ## COG0680 Ni,Fe-hydrogenase maturation factor 1280 686 Op 2 . - CDS 1423830 - 1424240 539 ## ECL_04057 hydrogenase 3 large subunit processing protein 1281 686 Op 3 6/0.131 - CDS 1424237 - 1425004 945 ## COG3260 Ni,Fe-hydrogenase III small subunit 1282 686 Op 4 5/0.212 - CDS 1425004 - 1425546 587 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 1283 686 Op 5 7/0.083 - CDS 1425556 - 1427265 2291 ## COG3261 Ni,Fe-hydrogenase III large subunit 1284 686 Op 6 10/0.036 - CDS 1427281 - 1428204 1278 ## COG0650 Formate hydrogenlyase subunit 4 1285 686 Op 7 4/0.342 - CDS 1428206 - 1430020 2331 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 1286 686 Op 8 . - CDS 1430017 - 1430526 490 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 1287 687 Tu 1 . - CDS 1430698 - 1431162 553 ## ECL_04064 formate hydrogenlyase regulatory protein HycA - Prom 1431222 - 1431281 1.6 + Prom 1431113 - 1431172 2.8 1288 688 Op 1 11/0.023 + CDS 1431374 - 1431724 310 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 1289 688 Op 2 8/0.052 + CDS 1431728 - 1432591 1019 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 1290 688 Op 3 13/0.014 + CDS 1432582 - 1432854 319 ## COG0298 Hydrogenase maturation factor 1291 688 Op 4 4/0.342 + CDS 1432858 - 1433979 875 ## COG0409 Hydrogenase maturation factor 1292 688 Op 5 3/0.435 + CDS 1433976 - 1434986 1124 ## COG0309 Hydrogenase maturation factor 1293 688 Op 6 . + CDS 1435064 - 1437121 2526 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains + Term 1437132 - 1437164 4.1 + Prom 1437160 - 1437219 4.5 1294 689 Op 1 33/0.000 + CDS 1437272 - 1438270 1112 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 1295 689 Op 2 35/0.000 + CDS 1438270 - 1439307 1188 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 1296 689 Op 3 . + CDS 1439304 - 1440068 198 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 1297 689 Op 4 . + CDS 1440084 - 1441304 1180 ## COG0477 Permeases of the major facilitator superfamily + Term 1441447 - 1441489 -0.6 1298 690 Tu 1 . - CDS 1441310 - 1441681 299 ## ECL_04076 hypothetical protein - Prom 1441772 - 1441831 2.1 + Prom 1441636 - 1441695 4.7 1299 691 Tu 1 . + CDS 1441830 - 1442060 244 ## ECL_04077 hypothetical protein 1300 692 Tu 1 . + CDS 1442174 - 1444735 3054 ## COG0249 Mismatch repair ATPase (MutS family) + Term 1444797 - 1444835 0.4 1301 693 Op 1 . - CDS 1444829 - 1445050 293 ## SC2853 hypothetical protein 1302 693 Op 2 6/0.131 - CDS 1445061 - 1446488 1766 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 1303 693 Op 3 . - CDS 1446478 - 1447080 723 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase - Prom 1447113 - 1447172 4.5 + Prom 1447172 - 1447231 4.9 1304 694 Tu 1 . + CDS 1447254 - 1447661 387 ## COG1846 Transcriptional regulators + Term 1447873 - 1447907 0.8 1305 695 Tu 1 . - CDS 1447658 - 1448545 715 ## COG0583 Transcriptional regulator - Prom 1448573 - 1448632 2.0 + Prom 1448518 - 1448577 3.3 1306 696 Op 1 2/0.532 + CDS 1448655 - 1449857 779 ## COG0477 Permeases of the major facilitator superfamily 1307 696 Op 2 . + CDS 1449854 - 1450231 246 ## COG4460 Uncharacterized protein conserved in bacteria + Term 1450243 - 1450275 5.0 - Term 1450227 - 1450267 6.3 1308 697 Op 1 8/0.052 - CDS 1450282 - 1451274 1256 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 1309 697 Op 2 11/0.023 - CDS 1451334 - 1452458 528 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 1452488 - 1452547 2.6 - Term 1452490 - 1452531 5.2 1310 698 Op 1 13/0.014 - CDS 1452575 - 1453201 444 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase 1311 698 Op 2 8/0.052 - CDS 1453195 - 1453956 532 ## COG0496 Predicted acid phosphatase 1312 698 Op 3 8/0.052 - CDS 1453937 - 1454986 912 ## COG0585 Uncharacterized conserved protein 1313 698 Op 4 19/0.000 - CDS 1454983 - 1455462 751 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1314 698 Op 5 11/0.023 - CDS 1455462 - 1456172 303 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 1315 698 Op 6 . - CDS 1456192 - 1456503 358 ## COG2919 Septum formation initiator 1316 698 Op 7 . - CDS 1456583 - 1456909 441 ## ECL_04098 hypothetical protein 1317 698 Op 8 7/0.083 - CDS 1456968 - 1457573 704 ## COG0529 Adenylylsulfate kinase and related kinases 1318 698 Op 9 18/0.000 - CDS 1457573 - 1458997 2016 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 1319 698 Op 10 4/0.342 - CDS 1459007 - 1459915 1302 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 1320 698 Op 11 . - CDS 1459925 - 1461283 1449 ## COG0007 Uroporphyrinogen-III methylase - Prom 1461311 - 1461370 4.3 + Prom 1461442 - 1461501 4.5 1321 699 Tu 1 . + CDS 1461521 - 1462564 953 ## COG2234 Predicted aminopeptidases + Term 1462571 - 1462616 1.6 - Term 1462461 - 1462503 1.1 1322 700 Op 1 11/0.023 - CDS 1462658 - 1463392 1117 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 1323 700 Op 2 11/0.023 - CDS 1463408 - 1465120 2253 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 1324 700 Op 3 . - CDS 1465120 - 1466925 1991 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) - Prom 1466993 - 1467052 6.0 + Prom 1466979 - 1467038 5.7 1325 701 Tu 1 . + CDS 1467232 - 1467594 436 ## COG0720 6-pyruvoyl-tetrahydropterin synthase + Term 1467696 - 1467738 2.1 - Term 1467463 - 1467496 0.2 1326 702 Tu 1 . - CDS 1467579 - 1469933 1516 ## COG3664 Beta-xylosidase - Prom 1469978 - 1470037 5.7 + Prom 1469722 - 1469781 2.4 1327 703 Op 1 5/0.212 + CDS 1469991 - 1471274 1189 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1328 703 Op 2 . + CDS 1471302 - 1472699 1057 ## COG0477 Permeases of the major facilitator superfamily - Term 1472676 - 1472706 3.3 1329 704 Op 1 . - CDS 1472717 - 1473388 218 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 1330 704 Op 2 3/0.435 - CDS 1473443 - 1474150 685 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 1331 704 Op 3 . - CDS 1474150 - 1475709 1697 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 1475732 - 1475791 7.1 + Prom 1475687 - 1475746 9.1 1332 705 Tu 1 . + CDS 1475876 - 1476700 754 ## COG1737 Transcriptional regulators + Term 1476712 - 1476737 -0.5 - Term 1476693 - 1476733 5.5 1333 706 Op 1 8/0.052 - CDS 1476753 - 1478051 1437 ## COG0148 Enolase - Term 1478081 - 1478118 9.1 1334 706 Op 2 5/0.212 - CDS 1478134 - 1479771 1773 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 1479817 - 1479876 5.1 - Term 1479928 - 1479980 -0.9 1335 707 Tu 1 1/0.649 - CDS 1479995 - 1480786 1098 ## COG1694 Predicted pyrophosphatase - Term 1480796 - 1480836 3.0 1336 708 Op 1 8/0.052 - CDS 1480853 - 1483084 2728 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Term 1483095 - 1483128 4.5 1337 708 Op 2 . - CDS 1483136 - 1484434 1010 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 1484374 - 1484433 3.4 1338 709 Tu 1 . + CDS 1484492 - 1487251 3371 ## COG0642 Signal transduction histidine kinase - Term 1487242 - 1487273 -0.1 1339 710 Op 1 1/0.649 - CDS 1487301 - 1488446 862 ## COG1929 Glycerate kinase - Term 1488473 - 1488520 0.1 1340 710 Op 2 5/0.212 - CDS 1488524 - 1489861 1816 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 1341 710 Op 3 7/0.083 - CDS 1489877 - 1491217 1723 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 1342 710 Op 4 . - CDS 1491217 - 1492572 1715 ## COG0477 Permeases of the major facilitator superfamily 1343 710 Op 5 . - CDS 1492538 - 1492774 113 ## 1344 711 Op 1 5/0.212 - CDS 1492907 - 1493356 610 ## COG0716 Flavodoxins 1345 711 Op 2 7/0.083 - CDS 1493372 - 1494157 181 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 1346 711 Op 3 . - CDS 1494154 - 1494483 370 ## COG3098 Uncharacterized protein conserved in bacteria - Prom 1494509 - 1494568 9.2 1347 712 Tu 1 . + CDS 1494874 - 1495032 56 ## 1348 713 Tu 1 . - CDS 1495116 - 1495457 328 ## ECL_04126 SecY interacting protein Syd - Prom 1495697 - 1495756 3.7 + Prom 1495642 - 1495701 3.8 1349 714 Tu 1 6/0.131 + CDS 1495731 - 1496573 1024 ## COG0780 Enzyme related to GTP cyclohydrolase I + Prom 1496595 - 1496654 1.8 1350 715 Tu 1 4/0.342 + CDS 1496720 - 1498054 1793 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 1498077 - 1498106 2.1 + Prom 1498439 - 1498498 5.0 1351 716 Op 1 10/0.036 + CDS 1498559 - 1499848 1655 ## COG0814 Amino acid permeases + Term 1499856 - 1499890 6.3 1352 716 Op 2 2/0.532 + CDS 1499911 - 1501278 1473 ## COG1760 L-serine deaminase + Term 1501288 - 1501322 6.0 + Prom 1501309 - 1501368 2.5 1353 717 Tu 1 . + CDS 1501391 - 1502146 666 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) - Term 1502168 - 1502197 -0.8 1354 718 Op 1 5/0.212 - CDS 1502229 - 1503329 1265 ## COG2933 Predicted SAM-dependent methyltransferase 1355 718 Op 2 6/0.131 - CDS 1503322 - 1503717 549 ## COG2363 Uncharacterized small membrane protein 1356 718 Op 3 . - CDS 1503757 - 1504674 687 ## COG0583 Transcriptional regulator - Prom 1504746 - 1504805 5.0 1357 719 Tu 1 . - CDS 1505025 - 1505252 296 ## ECL_04135 hypothetical protein - Prom 1505349 - 1505408 3.0 + Prom 1505209 - 1505268 3.3 1358 720 Op 1 7/0.083 + CDS 1505445 - 1506650 1277 ## COG0520 Selenocysteine lyase 1359 720 Op 2 . + CDS 1506650 - 1507096 474 ## COG2166 SufE protein probably involved in Fe-S center assembly - Term 1506942 - 1506974 4.2 1360 721 Op 1 8/0.052 - CDS 1507087 - 1507893 965 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Term 1507901 - 1507932 4.1 1361 721 Op 2 3/0.435 - CDS 1507969 - 1509066 1138 ## COG2821 Membrane-bound lytic murein transglycosylase - Prom 1509241 - 1509300 23.4 + TRNA 1509275 - 1509351 86.1 # Met CAT 0 0 + TRNA 1509523 - 1509599 86.1 # Met CAT 0 0 + TRNA 1509644 - 1509720 86.1 # Met CAT 0 0 - Term 1509770 - 1509800 1.7 1362 722 Tu 1 . - CDS 1509809 - 1511005 1273 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 1511202 - 1511261 4.4 + Prom 1511089 - 1511148 3.8 1363 723 Tu 1 . + CDS 1511290 - 1512621 1543 ## COG0548 Acetylglutamate kinase - Term 1512613 - 1512649 6.7 1364 724 Op 1 13/0.014 - CDS 1512655 - 1514475 1798 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 1365 724 Op 2 5/0.212 - CDS 1514472 - 1518014 3116 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 1366 724 Op 3 5/0.212 - CDS 1518011 - 1520893 3378 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like - Term 1520973 - 1521005 -1.0 1367 725 Op 1 5/0.212 - CDS 1521033 - 1524407 2928 ## COG1330 Exonuclease V gamma subunit 1368 725 Op 2 . - CDS 1524420 - 1524743 171 ## COG4967 Tfp pilus assembly protein PilV 1369 725 Op 3 . - CDS 1524728 - 1525108 224 ## ECL_04147 hypothetical protein 1370 725 Op 4 12/0.016 - CDS 1525123 - 1525683 218 ## COG4795 Type II secretory pathway, component PulJ 1371 725 Op 5 4/0.342 - CDS 1525674 - 1526138 281 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 1526250 - 1526309 4.1 - Term 1526271 - 1526302 3.2 1372 726 Op 1 11/0.023 - CDS 1526323 - 1527117 790 ## COG0207 Thymidylate synthase 1373 726 Op 2 5/0.212 - CDS 1527124 - 1527999 1167 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 1528081 - 1528140 1.8 - Term 1528088 - 1528121 2.4 1374 727 Op 1 7/0.083 - CDS 1528209 - 1530455 2375 ## COG3605 Signal transduction protein containing GAF and PtsI domains 1375 727 Op 2 . - CDS 1530468 - 1530932 191 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 1531102 - 1531161 5.7 + Prom 1531576 - 1531635 5.5 1376 728 Tu 1 . + CDS 1531682 - 1532374 665 ## COG3066 DNA mismatch repair protein + Prom 1532399 - 1532458 5.1 1377 729 Tu 1 . + CDS 1532503 - 1532721 292 ## ECL_04154 hypothetical protein + Term 1532725 - 1532766 4.3 1378 730 Tu 1 . - CDS 1532581 - 1532859 105 ## + Prom 1532747 - 1532806 4.2 1379 731 Tu 1 . + CDS 1532854 - 1533894 1413 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 1533901 - 1533943 6.1 - Term 1533889 - 1533929 7.1 1380 732 Op 1 5/0.212 - CDS 1533988 - 1535181 1613 ## COG0477 Permeases of the major facilitator superfamily 1381 732 Op 2 . - CDS 1535174 - 1537333 2460 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Prom 1537857 - 1537916 2.3 1382 733 Tu 1 . + CDS 1537950 - 1538972 1151 ## COG1609 Transcriptional regulators 1383 734 Op 1 . - CDS 1538927 - 1539403 286 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1384 734 Op 2 . - CDS 1539400 - 1540173 811 ## COG2186 Transcriptional regulators 1385 734 Op 3 8/0.052 - CDS 1540252 - 1541679 1626 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 1386 734 Op 4 . - CDS 1541687 - 1543012 1794 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 1543153 - 1543212 2.5 + Prom 1543017 - 1543076 4.0 1387 735 Tu 1 . + CDS 1543312 - 1544349 1118 ## COG1609 Transcriptional regulators 1388 736 Tu 1 . - CDS 1544319 - 1545581 1515 ## COG0019 Diaminopimelate decarboxylase - Prom 1545630 - 1545689 6.4 + Prom 1545602 - 1545661 4.0 1389 737 Tu 1 . + CDS 1545703 - 1546629 1030 ## COG0583 Transcriptional regulator + Term 1546668 - 1546702 1.1 1390 738 Tu 1 . - CDS 1546624 - 1547316 778 ## COG1794 Aspartate racemase + Prom 1547264 - 1547323 1.9 1391 739 Tu 1 . + CDS 1547452 - 1547775 449 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 1547781 - 1547811 3.0 - Term 1547768 - 1547798 3.0 1392 740 Tu 1 . - CDS 1547810 - 1548946 1288 ## COG3765 Chain length determinant protein + Prom 1549216 - 1549275 5.5 1393 741 Op 1 38/0.000 + CDS 1549492 - 1550382 1062 ## COG1175 ABC-type sugar transport systems, permease components 1394 741 Op 2 21/0.000 + CDS 1550375 - 1551277 1291 ## COG0395 ABC-type sugar transport system, permease component 1395 741 Op 3 9/0.047 + CDS 1551290 - 1552417 1584 ## COG3839 ABC-type sugar transport systems, ATPase components 1396 741 Op 4 . + CDS 1552431 - 1553717 1779 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 1553713 - 1553752 5.2 1397 742 Tu 1 . - CDS 1553802 - 1555217 1863 ## COG0477 Permeases of the major facilitator superfamily - Prom 1555355 - 1555414 5.8 - Term 1555477 - 1555514 4.6 1398 743 Op 1 9/0.047 - CDS 1555530 - 1556291 181 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1399 743 Op 2 . - CDS 1556355 - 1557083 884 ## COG3717 5-keto 4-deoxyuronate isomerase - Prom 1557260 - 1557319 5.2 + Prom 1557392 - 1557451 3.0 1400 744 Tu 1 . + CDS 1557492 - 1558667 1467 ## COG0823 Periplasmic component of the Tol biopolymer transport system + Term 1558697 - 1558727 5.0 1401 745 Tu 1 . - CDS 1558821 - 1559504 634 ## ECL_04178 oligogalacturonate-specific porin - Prom 1559548 - 1559607 6.3 - Term 1559769 - 1559803 2.5 1402 746 Op 1 1/0.649 - CDS 1559824 - 1561002 1297 ## COG0183 Acetyl-CoA acetyltransferase - Prom 1561024 - 1561083 2.6 1403 746 Op 2 . - CDS 1561095 - 1561961 831 ## COG0583 Transcriptional regulator - Prom 1561996 - 1562055 5.0 + Prom 1561763 - 1561822 2.9 1404 747 Tu 1 . + CDS 1562063 - 1562527 413 ## COG4125 Predicted membrane protein + Prom 1562550 - 1562609 4.2 1405 748 Tu 1 . + CDS 1562644 - 1563873 1374 ## COG0814 Amino acid permeases + Term 1563880 - 1563912 5.4 1406 749 Op 1 5/0.212 - CDS 1563907 - 1564179 425 ## COG2388 Predicted acetyltransferase 1407 749 Op 2 . - CDS 1564190 - 1564420 332 ## COG3592 Uncharacterized conserved protein - Prom 1564449 - 1564508 4.9 + Prom 1564657 - 1564716 3.6 1408 750 Tu 1 3/0.435 + CDS 1564874 - 1565062 99 ## COG3729 General stress protein + Term 1565095 - 1565138 3.7 + Prom 1565075 - 1565134 1.8 1409 751 Op 1 4/0.342 + CDS 1565155 - 1565652 662 ## COG3685 Uncharacterized protein conserved in bacteria 1410 751 Op 2 3/0.435 + CDS 1565715 - 1566221 587 ## COG3685 Uncharacterized protein conserved in bacteria 1411 751 Op 3 . + CDS 1566239 - 1567111 906 ## COG3546 Mn-containing catalase 1412 751 Op 4 31/0.000 + CDS 1567182 - 1568585 1565 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 1413 751 Op 5 . + CDS 1568585 - 1569595 1464 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 1414 751 Op 6 . + CDS 1569604 - 1571229 1651 ## COG0366 Glycosidases + Term 1571313 - 1571355 1.0 - Term 1570948 - 1571000 3.2 1415 752 Op 1 2/0.532 - CDS 1571230 - 1572216 1074 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1416 752 Op 2 . - CDS 1572233 - 1572751 549 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) 1417 752 Op 3 . - CDS 1572763 - 1573209 438 ## COG2323 Predicted membrane protein 1418 752 Op 4 . - CDS 1573219 - 1573722 322 ## ECL_02053 hypothetical protein - Prom 1573845 - 1573904 4.4 + Prom 1573771 - 1573830 5.2 1419 753 Op 1 . + CDS 1573862 - 1574251 377 ## COG3111 Uncharacterized conserved protein 1420 753 Op 2 . + CDS 1574313 - 1575197 888 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 1575221 - 1575262 5.6 - Term 1575261 - 1575289 1.0 1421 754 Tu 1 . - CDS 1575300 - 1577282 1682 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 1577378 - 1577437 5.0 + Prom 1577342 - 1577401 6.8 1422 755 Tu 1 . + CDS 1577454 - 1577852 283 ## ECL_04187 hypothetical protein + Term 1577863 - 1577895 0.5 - Term 1577844 - 1577889 4.6 1423 756 Tu 1 . - CDS 1577911 - 1578522 623 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 1578558 - 1578617 4.1 - Term 1578561 - 1578597 0.9 1424 757 Op 1 . - CDS 1578623 - 1579252 547 ## ECL_04189 CRP/FNR family transcriptional regulator 1425 757 Op 2 . - CDS 1579316 - 1580491 951 ## COG2067 Long-chain fatty acid transport protein - Prom 1580517 - 1580576 6.0 1426 758 Tu 1 . - CDS 1580632 - 1580775 96 ## - Prom 1580799 - 1580858 3.6 + Prom 1581277 - 1581336 4.7 1427 759 Tu 1 . + CDS 1581370 - 1582404 118 ## COG5529 Pyocin large subunit + Term 1582413 - 1582444 -1.0 - TRNA 1582943 - 1583016 78.8 # Gly CCC 0 0 - Term 1583051 - 1583089 -0.0 1428 760 Tu 1 . - CDS 1583097 - 1583738 480 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 1583974 - 1584033 3.6 + Prom 1583898 - 1583957 2.6 1429 761 Tu 1 . + CDS 1584001 - 1584543 461 ## COG1443 Isopentenyldiphosphate isomerase + Term 1584548 - 1584583 4.5 - Term 1584536 - 1584571 4.5 1430 762 Op 1 8/0.052 - CDS 1584592 - 1586109 2224 ## COG1190 Lysyl-tRNA synthetase (class II) 1431 762 Op 2 5/0.212 - CDS 1586119 - 1587000 1146 ## COG1186 Protein chain release factor B - Prom 1587206 - 1587265 1.6 - Term 1587249 - 1587283 -0.0 1432 763 Tu 1 . - CDS 1587308 - 1588900 2160 ## COG0608 Single-stranded DNA-specific exonuclease 1433 764 Op 1 8/0.052 - CDS 1589047 - 1589760 1020 ## COG1651 Protein-disulfide isomerase 1434 764 Op 2 . - CDS 1589789 - 1590685 737 ## COG4974 Site-specific recombinase XerD - Prom 1590708 - 1590767 1.9 + Prom 1590702 - 1590761 2.8 1435 765 Tu 1 . + CDS 1590787 - 1591308 896 ## COG0716 Flavodoxins 1436 766 Op 1 . - CDS 1591310 - 1591672 390 ## ECL_04222 hypothetical protein 1437 766 Op 2 . - CDS 1591701 - 1591967 316 ## COG2938 Uncharacterized conserved protein - Prom 1592123 - 1592182 2.1 + Prom 1592180 - 1592239 4.7 1438 767 Tu 1 . + CDS 1592262 - 1593242 1284 ## COG0354 Predicted aminomethyltransferase related to GcvT - Term 1593067 - 1593095 2.1 1439 768 Tu 1 . - CDS 1593327 - 1593986 910 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 1594024 - 1594083 3.7 + Prom 1594074 - 1594133 6.0 1440 769 Tu 1 . + CDS 1594253 - 1594984 872 ## COG1737 Transcriptional regulators + Prom 1595013 - 1595072 3.2 1441 770 Tu 1 . + CDS 1595101 - 1596534 2041 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 1596536 - 1596582 5.2 + Prom 1596580 - 1596639 3.5 1442 771 Op 1 . + CDS 1596659 - 1597018 232 ## KPN_03332 suppression of copper sensitivity: putative copper binding protein 1443 771 Op 2 1/0.649 + CDS 1597067 - 1599076 2291 ## COG4232 Thiol:disulfide interchange protein 1444 771 Op 3 2/0.532 + CDS 1599078 - 1599680 709 ## COG1651 Protein-disulfide isomerase 1445 771 Op 4 . + CDS 1599670 - 1600170 530 ## COG0526 Thiol-disulfide isomerase and thioredoxins 1446 772 Op 1 1/0.649 - CDS 1600173 - 1600919 272 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 1600925 - 1600964 4.5 1447 772 Op 2 12/0.016 - CDS 1600987 - 1603860 3761 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 1448 773 Op 1 18/0.000 - CDS 1603988 - 1604377 661 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 1449 773 Op 2 5/0.212 - CDS 1604401 - 1605495 1338 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) - Prom 1605714 - 1605773 4.3 - Term 1605833 - 1605870 5.4 1450 774 Op 1 8/0.052 - CDS 1605893 - 1607059 1469 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1451 774 Op 2 8/0.052 - CDS 1607108 - 1608286 914 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1452 774 Op 3 5/0.212 - CDS 1608283 - 1609602 1583 ## COG0006 Xaa-Pro aminopeptidase 1453 774 Op 4 . - CDS 1609628 - 1610212 787 ## COG3079 Uncharacterized protein conserved in bacteria - Prom 1610234 - 1610293 1.8 + Prom 1610256 - 1610315 2.9 1454 775 Tu 1 . + CDS 1610374 - 1610703 133 ## COG3027 Uncharacterized protein conserved in bacteria 1455 776 Tu 1 . + CDS 1610953 - 1611549 580 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Term 1611642 - 1611693 13.1 1456 777 Op 1 . - CDS 1611703 - 1612935 1687 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 1612988 - 1613047 5.1 - Term 1613158 - 1613201 1.4 1457 777 Op 2 . - CDS 1613202 - 1613861 813 ## COG0120 Ribose 5-phosphate isomerase - Prom 1613934 - 1613993 3.3 + Prom 1613890 - 1613949 2.9 1458 778 Tu 1 . + CDS 1613989 - 1614882 1181 ## COG0583 Transcriptional regulator - Term 1614879 - 1614918 5.2 1459 779 Op 1 . - CDS 1614926 - 1615633 865 ## COG2968 Uncharacterized conserved protein 1460 779 Op 2 . - CDS 1615741 - 1616376 834 ## COG1279 Lysine efflux permease - Prom 1616435 - 1616494 4.8 - Term 1616469 - 1616507 0.4 1461 780 Tu 1 . - CDS 1616520 - 1617374 1129 ## COG0668 Small-conductance mechanosensitive channel - Prom 1617433 - 1617492 4.8 - Term 1617504 - 1617539 6.5 1462 781 Op 1 9/0.047 - CDS 1617563 - 1618642 1155 ## COG0191 Fructose/tagatose bisphosphate aldolase - Term 1618695 - 1618725 3.0 1463 781 Op 2 26/0.000 - CDS 1618735 - 1619898 1448 ## COG0126 3-phosphoglycerate kinase 1464 781 Op 3 5/0.212 - CDS 1619948 - 1620967 1008 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 1621185 - 1621244 4.7 - Term 1621226 - 1621264 0.4 1465 782 Tu 1 . - CDS 1621334 - 1623325 2420 ## COG0021 Transketolase - Prom 1623398 - 1623457 2.7 + Prom 1623472 - 1623531 3.2 1466 783 Tu 1 . + CDS 1623598 - 1624356 986 ## COG0501 Zn-dependent protease with chaperone function - Term 1624348 - 1624393 8.3 1467 784 Op 1 3/0.435 - CDS 1624402 - 1626042 1832 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 1468 784 Op 2 1/0.649 - CDS 1626056 - 1627525 1702 ## COG1012 NAD-dependent aldehyde dehydrogenases 1469 784 Op 3 . - CDS 1627535 - 1628305 975 ## COG1712 Predicted dinucleotide-utilizing enzyme 1470 784 Op 4 3/0.435 - CDS 1628315 - 1629109 1055 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1471 784 Op 5 . - CDS 1629093 - 1629863 951 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 1472 784 Op 6 . - CDS 1629874 - 1630404 738 ## ECL_04257 hypothetical protein 1473 784 Op 7 . - CDS 1630415 - 1631671 1557 ## COG0477 Permeases of the major facilitator superfamily 1474 784 Op 8 . - CDS 1631697 - 1632884 1281 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 1475 784 Op 9 . - CDS 1632881 - 1633807 1282 ## COG0346 Lactoylglutathione lyase and related lyases 1476 784 Op 10 2/0.532 - CDS 1633886 - 1634677 949 ## COG1414 Transcriptional regulator 1477 784 Op 11 . - CDS 1634687 - 1635436 231 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 1478 784 Op 12 . - CDS 1635436 - 1636458 1185 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 1479 784 Op 13 . - CDS 1636469 - 1636777 470 ## ECL_04265 hypothetical protein 1480 784 Op 14 . - CDS 1636774 - 1637097 333 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - Prom 1637308 - 1637367 9.8 - Term 1637689 - 1637732 11.1 1481 785 Tu 1 5/0.212 - CDS 1637747 - 1638667 1361 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family - Prom 1638698 - 1638757 4.8 - Term 1638703 - 1638751 8.2 1482 786 Tu 1 . - CDS 1638887 - 1640785 2616 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) - Prom 1641000 - 1641059 4.7 + Prom 1641526 - 1641585 6.2 1483 787 Tu 1 . + CDS 1641664 - 1642818 1506 ## COG0192 S-adenosylmethionine synthetase + Term 1642841 - 1642872 2.4 + Prom 1643047 - 1643106 4.8 1484 788 Op 1 4/0.342 + CDS 1643235 - 1644632 1925 ## COG0477 Permeases of the major facilitator superfamily + Term 1644640 - 1644685 4.6 1485 788 Op 2 6/0.131 + CDS 1644692 - 1645189 400 ## COG3091 Uncharacterized protein conserved in bacteria + Prom 1645203 - 1645262 2.6 1486 789 Op 1 3/0.435 + CDS 1645284 - 1645991 623 ## COG2356 Endonuclease I 1487 789 Op 2 2/0.532 + CDS 1646043 - 1646774 687 ## COG1385 Uncharacterized protein conserved in bacteria 1488 789 Op 3 2/0.532 + CDS 1646806 - 1647753 338 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme + Term 1647757 - 1647809 8.7 1489 790 Op 1 8/0.052 + CDS 1647828 - 1648388 669 ## COG1678 Putative transcriptional regulator 1490 790 Op 2 . + CDS 1648388 - 1648804 429 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) - Term 1648529 - 1648574 2.4 1491 791 Tu 1 . - CDS 1648815 - 1649795 990 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Prom 1649709 - 1649768 3.7 1492 792 Op 1 5/0.212 + CDS 1649813 - 1650514 681 ## COG0325 Predicted enzyme with a TIM-barrel fold 1493 792 Op 2 6/0.131 + CDS 1650536 - 1651102 634 ## COG0762 Predicted integral membrane protein 1494 792 Op 3 2/0.532 + CDS 1651099 - 1651395 235 ## COG1872 Uncharacterized conserved protein 1495 792 Op 4 13/0.014 + CDS 1651399 - 1651992 924 ## PROTEIN SUPPORTED gi|24114209|ref|NP_708719.1| putative deoxyribonucleotide triphosphate pyrophosphatase 1496 792 Op 5 . + CDS 1651985 - 1653133 1232 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 1497 793 Tu 1 . + CDS 1653190 - 1653552 98 ## COG2852 Uncharacterized protein conserved in bacteria + Term 1653677 - 1653737 -0.8 - Term 1653565 - 1653605 1.5 1498 794 Tu 1 . - CDS 1653726 - 1654442 1008 ## ECL_04285 hypothetical protein - Term 1654454 - 1654486 5.0 1499 795 Op 1 4/0.342 - CDS 1654500 - 1654826 481 ## COG3171 Uncharacterized protein conserved in bacteria 1500 795 Op 2 . - CDS 1654826 - 1655545 680 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 1655778 - 1655837 4.0 + Prom 1655538 - 1655597 3.8 1501 796 Op 1 11/0.023 + CDS 1655684 - 1656742 1073 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 1502 796 Op 2 6/0.131 + CDS 1656769 - 1657041 426 ## COG2924 Fe-S cluster protector protein 1503 797 Tu 1 . + CDS 1657163 - 1658242 1287 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Prom 1658408 - 1658467 6.1 1504 798 Tu 1 . + CDS 1658529 - 1659785 1768 ## COG0477 Permeases of the major facilitator superfamily - Term 1659731 - 1659780 3.0 1505 799 Tu 1 . - CDS 1659836 - 1661971 2171 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 1662017 - 1662076 4.7 + Prom 1661991 - 1662050 2.9 1506 800 Tu 1 . + CDS 1662156 - 1662866 687 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 1663043 - 1663084 6.1 + TRNA 1662962 - 1663037 84.1 # Phe GAA 0 0 - Term 1663294 - 1663347 5.0 1507 801 Op 1 . - CDS 1663355 - 1664401 592 ## COG3203 Outer membrane protein (porin) 1508 801 Op 2 1/0.649 - CDS 1664455 - 1665312 441 ## COG1737 Transcriptional regulators 1509 801 Op 3 8/0.052 - CDS 1665320 - 1665625 250 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 1510 801 Op 4 . - CDS 1665661 - 1665972 318 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 1511 801 Op 5 . - CDS 1665997 - 1667541 812 ## LAC30SC_09230 hypothetical protein 1512 801 Op 6 . - CDS 1667556 - 1668878 517 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 1668929 - 1668988 2.3 1513 802 Tu 1 . - CDS 1669009 - 1669365 241 ## ECL_04312 hypothetical protein - Prom 1669407 - 1669466 3.0 + Prom 1669700 - 1669759 6.9 1514 803 Tu 1 . + CDS 1669810 - 1670058 148 ## + Prom 1670069 - 1670128 3.4 1515 804 Op 1 . + CDS 1670205 - 1672643 1801 ## ECL_04313 biofilm PGA synthesis protein PgaA 1516 804 Op 2 6/0.131 + CDS 1672652 - 1674589 1721 ## COG0726 Predicted xylanase/chitin deacetylase 1517 804 Op 3 . + CDS 1674582 - 1675913 1118 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 1518 804 Op 4 . + CDS 1675910 - 1676344 413 ## ECL_04316 biofilm PGA synthesis protein PgaD + Term 1676351 - 1676388 8.4 - Term 1676333 - 1676382 12.3 1519 805 Tu 1 . - CDS 1676396 - 1678258 2250 ## COG0754 Glutathionylspermidine synthase - Prom 1678481 - 1678540 2.3 + Prom 1678297 - 1678356 4.5 1520 806 Tu 1 . + CDS 1678442 - 1679308 1167 ## COG0625 Glutathione S-transferase + Term 1679318 - 1679345 1.5 + Prom 1679339 - 1679398 2.4 1521 807 Tu 1 . + CDS 1679489 - 1679764 280 ## + Term 1679775 - 1679811 -0.1 + Prom 1679790 - 1679849 2.7 1522 808 Tu 1 . + CDS 1679880 - 1680626 828 ## COG1349 Transcriptional regulators of sugar metabolism - Term 1680584 - 1680623 10.2 1523 809 Tu 1 . - CDS 1680632 - 1682179 1629 ## COG0840 Methyl-accepting chemotaxis protein - Prom 1682247 - 1682306 5.4 + Prom 1682206 - 1682265 3.4 1524 810 Tu 1 . + CDS 1682286 - 1683371 1235 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 1525 811 Op 1 . - CDS 1683448 - 1683936 745 ## COG2862 Predicted membrane protein 1526 811 Op 2 . - CDS 1683980 - 1684483 420 ## ECL_04325 putative ATP-dependent RNA helicase-like protein - Prom 1684705 - 1684764 4.8 + Prom 1684478 - 1684537 6.3 1527 812 Tu 1 . + CDS 1684586 - 1684990 358 ## ECL_04326 hypothetical protein 1528 813 Tu 1 . + CDS 1685103 - 1685417 378 ## ECL_04327 putative cytoplasmic protein + Term 1685476 - 1685506 -0.5 - Term 1685381 - 1685407 1.7 1529 814 Op 1 30/0.000 - CDS 1685498 - 1685923 640 ## COG0848 Biopolymer transport protein 1530 814 Op 2 . - CDS 1685928 - 1686644 1030 ## COG0811 Biopolymer transport proteins - Prom 1686673 - 1686732 2.5 + Prom 1686637 - 1686696 3.0 1531 815 Tu 1 . + CDS 1686911 - 1688098 1412 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 1532 816 Tu 1 . + CDS 1688241 - 1688900 709 ## COG0586 Uncharacterized membrane-associated protein + Term 1688908 - 1688949 2.4 1533 817 Tu 1 . - CDS 1688947 - 1689846 838 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 1689928 - 1689987 2.7 1534 818 Tu 1 . + CDS 1690042 - 1691205 1661 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 1535 819 Tu 1 . + CDS 1691311 - 1692138 925 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 1692191 - 1692230 1.0 1536 820 Tu 1 . - CDS 1692229 - 1694403 2601 ## COG1032 Fe-S oxidoreductase - Prom 1694433 - 1694492 7.6 + Prom 1694464 - 1694523 3.2 1537 821 Tu 1 . + CDS 1694691 - 1696079 1102 ## COG0168 Trk-type K+ transport systems, membrane components 1538 822 Op 1 7/0.083 - CDS 1696114 - 1697526 1477 ## COG2132 Putative multicopper oxidases 1539 822 Op 2 5/0.212 - CDS 1697588 - 1698325 804 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 1698348 - 1698407 4.3 1540 823 Tu 1 . - CDS 1698488 - 1700746 3238 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 1700794 - 1700853 2.2 - Term 1700822 - 1700861 8.2 1541 824 Tu 1 . - CDS 1700865 - 1701266 547 ## COG3111 Uncharacterized conserved protein - Prom 1701341 - 1701400 7.5 + Prom 1701246 - 1701305 4.0 1542 825 Op 1 40/0.000 + CDS 1701406 - 1702065 905 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1543 825 Op 2 2/0.532 + CDS 1702062 - 1703399 1572 ## COG0642 Signal transduction histidine kinase + Prom 1703419 - 1703478 3.0 1544 826 Op 1 4/0.342 + CDS 1703504 - 1704085 792 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 1545 826 Op 2 . + CDS 1704116 - 1704430 421 ## COG1359 Uncharacterized conserved protein + Term 1704439 - 1704474 5.8 1546 827 Tu 1 . + CDS 1704516 - 1704956 609 ## COG1652 Uncharacterized protein containing LysM domain + Term 1705088 - 1705141 -0.3 - Term 1704952 - 1704983 4.8 1547 828 Op 1 . - CDS 1704989 - 1706176 1462 ## Ent638_3433 glycosy hydrolase family protein 1548 828 Op 2 1/0.649 - CDS 1706205 - 1707470 1447 ## COG0477 Permeases of the major facilitator superfamily 1549 828 Op 3 . - CDS 1707502 - 1709316 1909 ## COG4289 Uncharacterized protein conserved in bacteria - Prom 1709416 - 1709475 3.3 + Prom 1709393 - 1709452 2.0 1550 829 Tu 1 . + CDS 1709483 - 1710319 870 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain + Term 1710412 - 1710438 1.0 - Term 1710400 - 1710426 1.0 1551 830 Op 1 7/0.083 - CDS 1710438 - 1712330 2429 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 1552 830 Op 2 7/0.083 - CDS 1712359 - 1712940 516 ## COG3150 Predicted esterase 1553 830 Op 3 7/0.083 - CDS 1712940 - 1713767 535 ## COG1409 Predicted phosphohydrolases 1554 830 Op 4 8/0.052 - CDS 1713795 - 1714217 159 ## COG3151 Uncharacterized protein conserved in bacteria 1555 830 Op 5 . - CDS 1714214 - 1714846 519 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 1715002 - 1715061 6.2 + Prom 1714941 - 1715000 5.6 1556 831 Tu 1 . + CDS 1715050 - 1716528 1806 ## COG1538 Outer membrane protein + Term 1716533 - 1716575 0.6 + Prom 1716636 - 1716695 2.5 1557 832 Op 1 5/0.212 + CDS 1716741 - 1717388 603 ## COG5463 Predicted integral membrane protein 1558 832 Op 2 . + CDS 1717391 - 1718551 1344 ## COG0754 Glutathionylspermidine synthase + Term 1718602 - 1718639 -1.0 1559 833 Tu 1 . - CDS 1718634 - 1719422 925 ## COG3384 Uncharacterized conserved protein - Prom 1719454 - 1719513 2.7 1560 834 Tu 1 . + CDS 1719553 - 1720326 904 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 1720334 - 1720368 4.0 + Prom 1720402 - 1720461 6.4 1561 835 Tu 1 . + CDS 1720647 - 1721207 559 ## COG3539 P pilus assembly protein, pilin FimA + Term 1721227 - 1721272 5.5 - Term 1721064 - 1721103 5.1 1562 836 Tu 1 . - CDS 1721186 - 1721311 97 ## - Prom 1721400 - 1721459 4.5 1563 837 Op 1 10/0.036 + CDS 1721280 - 1723721 2090 ## COG3188 P pilus assembly protein, porin PapC 1564 837 Op 2 . + CDS 1723731 - 1724492 699 ## COG3121 P pilus assembly protein, chaperone PapD 1565 837 Op 3 . + CDS 1724476 - 1725537 946 ## ECL_04375 putative fimbrial protein + Term 1725549 - 1725576 1.5 - Term 1725529 - 1725573 8.2 1566 838 Tu 1 . - CDS 1725583 - 1726236 705 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Prom 1726526 - 1726585 4.2 1567 839 Tu 1 . + CDS 1726613 - 1726909 509 ## COG2960 Uncharacterized protein conserved in bacteria + Term 1726964 - 1726997 4.5 - Term 1726955 - 1726982 1.5 1568 840 Op 1 5/0.212 - CDS 1726987 - 1728417 1896 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 1569 840 Op 2 5/0.212 - CDS 1728458 - 1731313 3589 ## COG1391 Glutamine synthetase adenylyltransferase 1570 840 Op 3 . - CDS 1731335 - 1732636 1521 ## COG3025 Uncharacterized conserved protein - Prom 1732852 - 1732911 5.4 + Prom 1732790 - 1732849 3.3 1571 841 Op 1 7/0.083 + CDS 1732874 - 1733494 833 ## COG3103 SH3 domain protein 1572 841 Op 2 . + CDS 1733555 - 1734796 1255 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 1734762 - 1734803 6.1 1573 842 Tu 1 . - CDS 1734810 - 1735631 1223 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 1735654 - 1735713 3.4 - Term 1735650 - 1735682 1.0 1574 843 Tu 1 . - CDS 1735738 - 1736106 499 ## COG1539 Dihydroneopterin aldolase - Prom 1736185 - 1736244 2.5 + Prom 1736114 - 1736173 2.1 1575 844 Tu 1 . + CDS 1736214 - 1736828 624 ## COG0344 Predicted membrane protein + Prom 1736852 - 1736911 1.9 1576 845 Op 1 8/0.052 + CDS 1736940 - 1737767 651 ## COG0829 Urease accessory protein UreH 1577 845 Op 2 13/0.014 + CDS 1737778 - 1738080 317 ## COG0831 Urea amidohydrolase (urease) gamma subunit 1578 845 Op 3 17/0.000 + CDS 1738091 - 1738405 318 ## COG0832 Urea amidohydrolase (urease) beta subunit 1579 845 Op 4 10/0.036 + CDS 1738398 - 1740101 1990 ## COG0804 Urea amidohydrolase (urease) alpha subunit 1580 845 Op 5 . + CDS 1740111 - 1740575 573 ## COG2371 Urease accessory protein UreE 1581 845 Op 6 . + CDS 1740585 - 1741124 735 ## COG2370 Hydrogenase/urease accessory protein 1582 845 Op 7 17/0.000 + CDS 1741154 - 1741798 625 ## COG0830 Urease accessory protein UreF 1583 845 Op 8 . + CDS 1741808 - 1742425 914 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase - Term 1742419 - 1742451 5.4 1584 846 Tu 1 . - CDS 1742459 - 1744489 1282 ## ECL_04394 serine protease - Prom 1744619 - 1744678 6.3 + Prom 1744603 - 1744662 5.0 1585 847 Tu 1 . + CDS 1744839 - 1745519 482 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 1745522 - 1745559 5.1 - Term 1745510 - 1745546 8.7 1586 848 Tu 1 . - CDS 1745551 - 1746564 659 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase - Prom 1746588 - 1746647 3.8 + Prom 1746678 - 1746737 5.8 1587 849 Tu 1 . + CDS 1746801 - 1747016 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 + Term 1747066 - 1747106 6.1 1588 850 Op 1 31/0.000 + CDS 1747132 - 1748877 1590 ## COG0358 DNA primase (bacterial type) 1589 850 Op 2 . + CDS 1749043 - 1750887 2500 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 1750901 - 1750940 7.7 - Term 1750894 - 1750922 1.0 1590 851 Tu 1 . - CDS 1750982 - 1751488 454 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 1751632 - 1751691 79.6 + TRNA 1751613 - 1751688 93.9 # Met CAT 0 0 - Term 1751681 - 1751732 6.1 1591 852 Op 1 . - CDS 1751850 - 1752191 129 ## JW0234 toxin of the YkfI-YafW toxin-antitoxin system 1592 852 Op 2 . - CDS 1752212 - 1752529 253 ## ECL_03717 putative antitoxin module of toxin-antitoxin system 1593 852 Op 3 . - CDS 1752549 - 1752770 149 ## ECL_03716 hypothetical protein - Prom 1752988 - 1753047 80.3 1594 853 Op 1 . - CDS 1755749 - 1756087 316 ## JW0242 conserved hypothetical protein - Prom 1756109 - 1756168 4.0 - Term 1756115 - 1756148 5.2 1595 853 Op 2 . - CDS 1756179 - 1757042 497 ## COG3596 Predicted GTPase - Prom 1757112 - 1757171 5.9 1596 854 Op 1 . + CDS 1757479 - 1758084 284 ## EcHS_A0336 hypothetical protein 1597 854 Op 2 . + CDS 1758081 - 1758683 439 ## STM4497 cytoplasmic protein 1598 854 Op 3 . + CDS 1758696 - 1762310 3142 ## EcHS_A0338 hypothetical protein + Term 1762327 - 1762355 -0.1 1599 854 Op 4 . + CDS 1762360 - 1765965 2532 ## COG1002 Type II restriction enzyme, methylase subunits 1600 854 Op 5 . + CDS 1765965 - 1767086 655 ## COG4637 Predicted ATPase 1601 854 Op 6 . + CDS 1767080 - 1767649 306 ## NT05HA_1642 hypothetical protein 1602 854 Op 7 . + CDS 1767649 - 1770246 1870 ## EcHS_A0340 hypothetical protein 1603 854 Op 8 . + CDS 1770257 - 1772326 1498 ## COG4930 Predicted ATP-dependent Lon-type protease - Term 1772381 - 1772427 10.1 1604 855 Tu 1 . - CDS 1772441 - 1773067 -59 ## JW2607 hypothetical protein - Prom 1773117 - 1773176 5.4 - Term 1773122 - 1773156 -0.7 1605 856 Tu 1 . - CDS 1773205 - 1774365 135 ## JW2605 hypothetical protein 1606 857 Tu 1 . - CDS 1774747 - 1774983 173 ## Dd1591_0922 phage transcriptional regulator AlpA - Prom 1775013 - 1775072 2.6 - Term 1775031 - 1775075 9.4 1607 858 Tu 1 . - CDS 1775175 - 1776038 274 ## Entcl_0671 hypothetical protein - Prom 1776066 - 1776125 4.2 + Prom 1776012 - 1776071 7.5 1608 859 Tu 1 . + CDS 1776177 - 1776335 56 ## - Term 1776604 - 1776642 3.7 1609 860 Op 1 . - CDS 1776684 - 1776944 104 ## YPK_0608 filamentation induced by cAMP protein Fic 1610 860 Op 2 3/0.435 - CDS 1776949 - 1778265 844 ## COG0582 Integrase - Prom 1778392 - 1778451 4.6 - Term 1778352 - 1778398 -0.8 1611 861 Tu 1 . - CDS 1778607 - 1779086 258 ## COG2801 Transposase and inactivated derivatives - Prom 1779188 - 1779247 2.1 1612 862 Op 1 11/0.023 - CDS 1779452 - 1779577 62 ## COG2801 Transposase and inactivated derivatives 1613 862 Op 2 . - CDS 1779596 - 1779718 95 ## COG2801 Transposase and inactivated derivatives - Prom 1779772 - 1779831 3.0 - Term 1779937 - 1779967 2.3 1614 863 Tu 1 . - CDS 1780015 - 1780299 87 ## Pvag_0919 hypothetical protein 1615 864 Op 1 . - CDS 1781080 - 1781700 210 ## EpC_29090 putative adhesin/hemagglutinin/hemolysin 1616 864 Op 2 . - CDS 1781729 - 1781986 61 ## gi|261223582|ref|ZP_05937863.1| hypothetical protein EscherichiacoliO157_03101 1617 865 Tu 1 . - CDS 1782175 - 1782642 319 ## COG3210 Large exoproteins involved in heme utilization or adhesion - Prom 1782804 - 1782863 2.6 - Term 1782970 - 1783002 1.5 1618 866 Op 1 . - CDS 1783011 - 1783322 81 ## ETA_19540 hypothetical protein 1619 866 Op 2 12/0.016 - CDS 1783322 - 1793629 8413 ## COG3210 Large exoproteins involved in heme utilization or adhesion 1620 866 Op 3 . - CDS 1793642 - 1795318 1450 ## COG2831 Hemolysin activation/secretion protein - Prom 1795366 - 1795425 4.3 + Prom 1795542 - 1795601 3.9 1621 867 Tu 1 . + CDS 1795631 - 1796800 1494 ## COG1076 DnaJ-domain-containing proteins 1 - Term 1796732 - 1796781 0.3 1622 868 Tu 1 . - CDS 1796801 - 1797565 918 ## COG2375 Siderophore-interacting protein - Prom 1797663 - 1797722 5.0 + Prom 1797631 - 1797690 7.0 1623 869 Tu 1 . + CDS 1797711 - 1798205 584 ## COG1695 Predicted transcriptional regulators + Term 1798214 - 1798258 -0.9 - Term 1798051 - 1798080 -0.9 1624 870 Tu 1 13/0.014 - CDS 1798202 - 1799761 1536 ## COG0840 Methyl-accepting chemotaxis protein - Prom 1799919 - 1799978 5.5 - Term 1799937 - 1799986 10.5 1625 871 Tu 1 . - CDS 1800001 - 1801521 1484 ## COG0840 Methyl-accepting chemotaxis protein - Prom 1801580 - 1801639 3.3 + Prom 1801838 - 1801897 2.8 1626 872 Tu 1 . + CDS 1802034 - 1803323 1534 ## COG4992 Ornithine/acetylornithine aminotransferase - Term 1803317 - 1803354 -1.0 1627 873 Tu 1 . - CDS 1803393 - 1803974 726 ## COG1396 Predicted transcriptional regulators - Prom 1804024 - 1804083 3.7 + Prom 1803956 - 1804015 2.4 1628 874 Tu 1 . + CDS 1804038 - 1804727 727 ## COG3382 Uncharacterized conserved protein 1629 875 Op 1 5/0.212 - CDS 1804813 - 1805106 390 ## COG1359 Uncharacterized conserved protein 1630 875 Op 2 6/0.131 - CDS 1805103 - 1805990 1129 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 1631 875 Op 3 16/0.000 - CDS 1806002 - 1807003 1500 ## COG1879 ABC-type sugar transport system, periplasmic component 1632 875 Op 4 11/0.023 - CDS 1807005 - 1807982 1282 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1633 875 Op 5 21/0.000 - CDS 1807983 - 1809014 1228 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1634 875 Op 6 . - CDS 1809011 - 1810498 205 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 1810651 - 1810710 2.7 + Prom 1810634 - 1810693 4.1 1635 876 Op 1 5/0.212 + CDS 1810714 - 1811685 1265 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 1636 876 Op 2 . + CDS 1811718 - 1813292 1852 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 1813529 - 1813580 0.9 1637 877 Tu 1 . + CDS 1813681 - 1815702 2341 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 1815944 - 1815982 3.7 1638 878 Tu 1 . - CDS 1815785 - 1816921 452 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 1816964 - 1817023 3.5 + Prom 1816891 - 1816950 2.8 1639 879 Op 1 1/0.649 + CDS 1817005 - 1817508 610 ## COG1451 Predicted metal-dependent hydrolase 1640 879 Op 2 3/0.435 + CDS 1817579 - 1818577 1176 ## COG0673 Predicted dehydrogenases and related proteins + Term 1818595 - 1818640 5.4 + Prom 1818736 - 1818795 4.2 1641 880 Tu 1 . + CDS 1818830 - 1819795 1356 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 1819803 - 1819843 11.1 + Prom 1819822 - 1819881 4.5 1642 881 Tu 1 . + CDS 1820006 - 1821247 1619 ## COG3633 Na+/serine symporter - Term 1821282 - 1821328 1.5 1643 882 Op 1 3/0.435 - CDS 1821333 - 1822820 1864 ## COG2721 Altronate dehydratase 1644 882 Op 2 . - CDS 1822838 - 1824250 1862 ## COG1904 Glucuronate isomerase + Prom 1824453 - 1824512 3.7 1645 883 Tu 1 . + CDS 1824726 - 1826024 1717 ## COG0477 Permeases of the major facilitator superfamily + Term 1826127 - 1826154 1.5 + Prom 1826028 - 1826087 4.0 1646 884 Tu 1 . + CDS 1826222 - 1826998 838 ## COG2186 Transcriptional regulators + Prom 1827113 - 1827172 5.3 1647 885 Op 1 . + CDS 1827341 - 1828003 656 ## COG0586 Uncharacterized membrane-associated protein 1648 885 Op 2 . + CDS 1828006 - 1828389 441 ## Ent638_3550 hypothetical protein 1649 886 Op 1 . + CDS 1828533 - 1828901 345 ## Ent638_3551 hypothetical protein 1650 886 Op 2 7/0.083 + CDS 1828931 - 1829236 432 ## COG4575 Uncharacterized conserved protein 1651 886 Op 3 . + CDS 1829239 - 1829637 453 ## COG5393 Predicted membrane protein 1652 886 Op 4 . + CDS 1829634 - 1829930 163 ## ECL_04500 hypothetical protein + Term 1829936 - 1829980 8.1 + Prom 1829993 - 1830052 3.6 1653 887 Op 1 3/0.435 + CDS 1830134 - 1830526 512 ## COG2259 Predicted membrane protein + Term 1830552 - 1830583 4.1 1654 887 Op 2 4/0.342 + CDS 1830599 - 1831585 1299 ## COG0435 Predicted glutathione S-transferase + Term 1831593 - 1831622 1.4 + Prom 1831587 - 1831646 3.7 1655 888 Tu 1 . + CDS 1831692 - 1832057 530 ## COG3152 Predicted membrane protein + Term 1832062 - 1832106 -0.7 1656 889 Tu 1 . - CDS 1832096 - 1832998 1005 ## COG0583 Transcriptional regulator - Prom 1833027 - 1833086 2.6 + Prom 1833022 - 1833081 2.6 1657 890 Tu 1 . + CDS 1833103 - 1833804 775 ## COG1741 Pirin-related protein + Term 1833871 - 1833931 26.5 - Term 1833856 - 1833922 29.3 1658 891 Op 1 3/0.435 - CDS 1833926 - 1835227 1165 ## COG3681 Uncharacterized conserved protein 1659 891 Op 2 . - CDS 1835248 - 1836579 1493 ## COG0814 Amino acid permeases - Prom 1836609 - 1836668 4.0 - Term 1836804 - 1836835 4.1 1660 892 Op 1 3/0.435 - CDS 1836852 - 1839146 2979 ## COG1882 Pyruvate-formate lyase 1661 892 Op 2 3/0.435 - CDS 1839162 - 1840370 1254 ## COG0282 Acetate kinase 1662 892 Op 3 4/0.342 - CDS 1840401 - 1841732 1701 ## COG0814 Amino acid permeases 1663 892 Op 4 4/0.342 - CDS 1841743 - 1842732 1002 ## COG1171 Threonine dehydratase 1664 892 Op 5 1/0.649 - CDS 1842829 - 1843749 815 ## COG0583 Transcriptional regulator - Prom 1843990 - 1844049 7.3 1665 893 Op 1 1/0.649 - CDS 1844834 - 1845979 1215 ## COG1929 Glycerate kinase 1666 893 Op 2 1/0.649 - CDS 1846036 - 1846926 1282 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 1667 893 Op 3 . - CDS 1846948 - 1847718 991 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase - Prom 1847752 - 1847811 6.9 1668 894 Tu 1 . + CDS 1848085 - 1849656 1851 ## COG2721 Altronate dehydratase + Term 1849678 - 1849707 2.1 + Prom 1849706 - 1849765 9.1 1669 895 Op 1 . + CDS 1849833 - 1850687 799 ## COG0191 Fructose/tagatose bisphosphate aldolase 1670 895 Op 2 4/0.342 + CDS 1850665 - 1851993 1028 ## COG4573 Predicted tagatose 6-phosphate kinase 1671 895 Op 3 13/0.014 + CDS 1851947 - 1852474 366 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 1672 895 Op 4 10/0.036 + CDS 1852502 - 1852786 404 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 1673 895 Op 5 7/0.083 + CDS 1852791 - 1854164 1436 ## COG3775 Phosphotransferase system, galactitol-specific IIC component + Term 1854171 - 1854199 3.0 1674 895 Op 6 3/0.435 + CDS 1854208 - 1855251 645 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 1855258 - 1855294 3.5 + Prom 1855280 - 1855339 5.2 1675 896 Tu 1 . + CDS 1855364 - 1856137 610 ## COG1349 Transcriptional regulators of sugar metabolism 1676 897 Op 1 . - CDS 1856151 - 1857131 505 ## COG3177 Uncharacterized conserved protein 1677 897 Op 2 . - CDS 1857137 - 1858000 1029 ## COG0313 Predicted methyltransferases - Prom 1858055 - 1858114 4.7 + Prom 1857872 - 1857931 3.6 1678 898 Op 1 10/0.036 + CDS 1858062 - 1860200 2097 ## COG3107 Putative lipoprotein 1679 898 Op 2 11/0.023 + CDS 1860158 - 1860553 238 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 1680 898 Op 3 11/0.023 + CDS 1860575 - 1861165 427 ## COG0279 Phosphoheptose isomerase 1681 898 Op 4 . + CDS 1861175 - 1861750 675 ## COG2823 Predicted periplasmic or secreted lipoprotein + Term 1861768 - 1861806 0.4 - Term 1861667 - 1861701 1.1 1682 899 Op 1 2/0.532 - CDS 1861801 - 1862838 1198 ## COG0701 Predicted permeases 1683 899 Op 2 . - CDS 1862879 - 1863523 747 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 1863654 - 1863713 3.5 1684 900 Tu 1 . + CDS 1863652 - 1864170 564 ## COG0693 Putative intracellular protease/amidase + Term 1864276 - 1864316 7.6 - Term 1864080 - 1864112 -0.2 1685 901 Tu 1 . - CDS 1864150 - 1864584 525 ## COG3787 Uncharacterized protein conserved in bacteria + Prom 1864492 - 1864551 1.9 1686 902 Tu 1 . + CDS 1864599 - 1864928 120 ## COG2827 Predicted endonuclease containing a URI domain + Term 1865150 - 1865183 1.9 - Term 1864851 - 1864888 1.1 1687 903 Op 1 6/0.131 - CDS 1864915 - 1865418 731 ## COG3153 Predicted acetyltransferase 1688 903 Op 2 . - CDS 1865412 - 1865891 527 ## COG3154 Putative lipid carrier protein + Prom 1866051 - 1866110 5.1 1689 904 Op 1 13/0.014 + CDS 1866158 - 1867153 1042 ## COG0826 Collagenase and related proteases 1690 904 Op 2 2/0.532 + CDS 1867161 - 1868039 1161 ## COG0826 Collagenase and related proteases 1691 905 Tu 1 . + CDS 1868118 - 1869125 1160 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 1869213 - 1869240 -0.8 1692 906 Tu 1 . - CDS 1869204 - 1870361 526 ## COG2801 Transposase and inactivated derivatives - Prom 1870429 - 1870488 4.2 1693 907 Tu 1 . - CDS 1870522 - 1871766 1668 ## COG0814 Amino acid permeases - Prom 1871809 - 1871868 5.9 - Term 1871831 - 1871886 10.4 1694 908 Tu 1 . - CDS 1871909 - 1873801 2050 ## COG0513 Superfamily II DNA and RNA helicases - Prom 1873827 - 1873886 4.9 - Term 1873909 - 1873946 0.7 1695 909 Tu 1 . - CDS 1873982 - 1874866 715 ## COG4785 Lipoprotein NlpI, contains TPR repeats - Term 1874931 - 1874965 7.0 1696 910 Op 1 26/0.000 - CDS 1874977 - 1877115 187 ## PROTEIN SUPPORTED gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 - Prom 1877268 - 1877327 3.3 - Term 1874931 - 1874965 7.0 1697 910 Op 2 26/0.000 - CDS 1874977 - 1877115 183 ## PROTEIN SUPPORTED gi|56963639|ref|YP_175370.1| 30S ribosomal protein S1 - Prom 1877268 - 1877327 3.3 - Term 1877309 - 1877336 1.5 1698 910 Op 3 14/0.011 - CDS 1877358 - 1877627 443 ## PROTEIN SUPPORTED gi|146313237|ref|YP_001178311.1| 30S ribosomal protein S15 - Prom 1877703 - 1877762 4.5 1699 911 Op 1 26/0.000 - CDS 1877782 - 1878732 1023 ## COG0130 Pseudouridine synthase 1700 911 Op 2 32/0.000 - CDS 1878732 - 1879136 589 ## COG0858 Ribosome-binding factor A - Prom 1879166 - 1879225 1.6 - Term 1879147 - 1879172 -0.5 1701 911 Op 3 20/0.000 - CDS 1879243 - 1881930 2921 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 1702 911 Op 4 32/0.000 - CDS 1881955 - 1883457 1044 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 1703 911 Op 5 . - CDS 1883486 - 1883908 352 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 1883931 - 1883990 1.6 - TRNA 1884146 - 1884222 86.1 # Met CAT 0 0 + Prom 1884376 - 1884435 2.2 1704 912 Tu 1 . + CDS 1884509 - 1885855 1784 ## COG0137 Argininosuccinate synthase + Term 1885871 - 1885910 4.1 - TRNA 1886009 - 1886095 69.1 # Leu GAG 0 0 - Term 1885962 - 1885997 4.4 1705 913 Tu 1 . - CDS 1886105 - 1886437 302 ## COG1314 Preprotein translocase subunit SecG - Prom 1886559 - 1886618 5.0 - Term 1886594 - 1886645 3.5 1706 914 Op 1 9/0.047 - CDS 1886660 - 1887997 1821 ## COG1109 Phosphomannomutase 1707 914 Op 2 7/0.083 - CDS 1887990 - 1888838 815 ## COG0294 Dihydropteroate synthase and related enzymes - Term 1888870 - 1888901 3.2 1708 915 Op 1 13/0.014 - CDS 1888937 - 1890880 1685 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 1890913 - 1890972 5.0 1709 915 Op 2 . - CDS 1890974 - 1891600 410 ## COG0293 23S rRNA methylase - Prom 1891713 - 1891772 4.1 + Prom 1891595 - 1891654 2.3 1710 916 Tu 1 . + CDS 1891689 - 1892021 446 ## PROTEIN SUPPORTED gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein + Term 1892105 - 1892144 7.4 - Term 1892098 - 1892126 2.1 1711 917 Tu 1 . - CDS 1892173 - 1892649 664 ## COG0782 Transcription elongation factor + Prom 1892792 - 1892851 3.4 1712 918 Op 1 1/0.649 + CDS 1892878 - 1894311 1113 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 1713 918 Op 2 40/0.000 + CDS 1894314 - 1894976 791 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1714 918 Op 3 . + CDS 1894982 - 1896016 746 ## COG0642 Signal transduction histidine kinase - Term 1896012 - 1896048 -0.3 1715 919 Op 1 6/0.131 - CDS 1896050 - 1897225 1566 ## COG0536 Predicted GTPase 1716 919 Op 2 6/0.131 - CDS 1897241 - 1898206 749 ## PROTEIN SUPPORTED gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 1898235 - 1898294 4.2 - Term 1898240 - 1898273 6.1 1717 920 Op 1 32/0.000 - CDS 1898302 - 1898559 436 ## PROTEIN SUPPORTED gi|157148757|ref|YP_001456076.1| 50S ribosomal protein L27 1718 920 Op 2 . - CDS 1898579 - 1898890 525 ## PROTEIN SUPPORTED gi|209910220|ref|ZP_03284704.1| hypothetical protein ENTCAN_04541 - Prom 1899117 - 1899176 4.6 + Prom 1899014 - 1899073 3.8 1719 921 Tu 1 . + CDS 1899148 - 1900119 1060 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 1900124 - 1900183 2.6 1720 922 Tu 1 . + CDS 1900349 - 1900447 70 ## - Term 1900650 - 1900688 1.0 1721 923 Op 1 11/0.023 - CDS 1900699 - 1901958 1446 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 1722 923 Op 2 6/0.131 - CDS 1902009 - 1902263 293 ## COG5007 Predicted transcriptional regulator, BolA superfamily - Prom 1902295 - 1902354 3.7 - Term 1902323 - 1902370 7.1 1723 924 Op 1 10/0.036 - CDS 1902391 - 1902684 364 ## COG3113 Predicted NTP binding protein (contains STAS domain) 1724 924 Op 2 13/0.014 - CDS 1902684 - 1903319 1032 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 1725 924 Op 3 16/0.000 - CDS 1903338 - 1903886 558 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 1726 924 Op 4 23/0.000 - CDS 1903891 - 1904673 855 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 1727 924 Op 5 . - CDS 1904681 - 1905493 254 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 1905551 - 1905610 3.2 + Prom 1905582 - 1905641 4.7 1728 925 Op 1 6/0.131 + CDS 1905721 - 1906698 752 ## COG0530 Ca2+/Na+ antiporter 1729 925 Op 2 13/0.014 + CDS 1906712 - 1907698 1075 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 1730 925 Op 3 11/0.023 + CDS 1907713 - 1908279 656 ## COG1778 Low specificity phosphatase (HAD superfamily) 1731 925 Op 4 12/0.016 + CDS 1908276 - 1908851 551 ## COG3117 Uncharacterized protein conserved in bacteria 1732 925 Op 5 19/0.000 + CDS 1908820 - 1909374 831 ## COG1934 Uncharacterized protein conserved in bacteria 1733 925 Op 6 17/0.000 + CDS 1909381 - 1910106 293 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 1734 925 Op 7 11/0.023 + CDS 1910154 - 1911587 1523 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 1735 925 Op 8 11/0.023 + CDS 1911610 - 1911897 478 ## PROTEIN SUPPORTED gi|146313273|ref|YP_001178347.1| putative sigma(54) modulation protein + Term 1911926 - 1911963 9.1 1736 926 Op 1 8/0.052 + CDS 1911980 - 1912471 467 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 1737 926 Op 2 7/0.083 + CDS 1912517 - 1913371 933 ## COG1660 Predicted P-loop-containing kinase 1738 926 Op 3 . + CDS 1913368 - 1913640 411 ## COG1925 Phosphotransferase system, HPr-related proteins - Term 1913492 - 1913526 2.3 1739 927 Op 1 3/0.435 - CDS 1913680 - 1914405 678 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 1740 927 Op 2 2/0.532 - CDS 1914402 - 1915055 755 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis - Prom 1915096 - 1915155 2.6 1741 928 Tu 1 . - CDS 1915288 - 1917621 3037 ## COG0642 Signal transduction histidine kinase - Prom 1917644 - 1917703 4.5 - Term 1917686 - 1917728 -0.4 1742 929 Op 1 22/0.000 - CDS 1917759 - 1918841 1573 ## COG0795 Predicted permeases 1743 929 Op 2 . - CDS 1918841 - 1919941 1216 ## COG0795 Predicted permeases - Prom 1920150 - 1920209 3.1 + Prom 1920057 - 1920116 2.8 1744 930 Tu 1 . + CDS 1920207 - 1921718 1704 ## COG0260 Leucyl aminopeptidase + Term 1921771 - 1921817 -0.5 1745 931 Op 1 5/0.212 + CDS 1921836 - 1922279 449 ## COG2927 DNA polymerase III, chi subunit 1746 931 Op 2 1/0.649 + CDS 1922279 - 1925134 3740 ## COG0525 Valyl-tRNA synthetase + Prom 1925168 - 1925227 2.0 1747 932 Op 1 1/0.649 + CDS 1925258 - 1925761 607 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1748 932 Op 2 . + CDS 1925845 - 1926864 1304 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 1926945 - 1926974 1.4 1749 933 Tu 1 . - CDS 1926957 - 1928603 1831 ## COG2376 Dihydroxyacetone kinase - Prom 1928737 - 1928796 1.6 + Prom 1928538 - 1928597 3.1 1750 934 Tu 1 . + CDS 1928741 - 1930243 1894 ## COG0433 Predicted ATPase 1751 935 Tu 1 . - CDS 1930223 - 1931206 876 ## COG1242 Predicted Fe-S oxidoreductase - Prom 1931437 - 1931496 4.2 1752 936 Op 1 21/0.000 + CDS 1931852 - 1936312 5571 ## COG0069 Glutamate synthase domain 2 1753 936 Op 2 . + CDS 1936322 - 1937740 1932 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 1937748 - 1937783 7.4 - Term 1937736 - 1937771 7.4 1754 937 Op 1 . - CDS 1937852 - 1938412 339 ## ECL_04604 hypothetical protein 1755 937 Op 2 10/0.036 - CDS 1938409 - 1940835 1791 ## COG3188 P pilus assembly protein, porin PapC 1756 937 Op 3 . - CDS 1940845 - 1941549 459 ## COG3121 P pilus assembly protein, chaperone PapD - Term 1942076 - 1942113 3.3 1757 938 Op 1 13/0.014 - CDS 1942132 - 1942623 442 ## COG2969 Stringent starvation protein B 1758 938 Op 2 6/0.131 - CDS 1942635 - 1943273 650 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Prom 1943475 - 1943534 4.8 - Term 1943516 - 1943552 2.3 1759 939 Op 1 59/0.000 - CDS 1943581 - 1943973 648 ## PROTEIN SUPPORTED gi|146313299|ref|YP_001178373.1| 30S ribosomal protein S9 1760 939 Op 2 5/0.212 - CDS 1943989 - 1944492 857 ## PROTEIN SUPPORTED gi|238896727|ref|YP_002921472.1| ribosomal protein L13 - Prom 1944574 - 1944633 4.6 - Term 1944643 - 1944682 5.2 1761 940 Tu 1 . - CDS 1944717 - 1945841 1128 ## COG1485 Predicted ATPase - Prom 1945861 - 1945920 2.2 + Prom 1945910 - 1945969 3.0 1762 941 Tu 1 . + CDS 1946031 - 1946429 463 ## COG3105 Uncharacterized protein conserved in bacteria + Term 1946453 - 1946486 3.1 + Prom 1946493 - 1946552 3.0 1763 942 Op 1 6/0.131 + CDS 1946600 - 1947967 1627 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Prom 1947974 - 1948033 3.0 1764 942 Op 2 . + CDS 1948060 - 1949127 1365 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 1949142 - 1949172 1.0 - Term 1949128 - 1949158 1.0 1765 943 Tu 1 . - CDS 1949179 - 1950117 1284 ## COG0039 Malate/lactate dehydrogenases - Prom 1950162 - 1950221 4.3 + Prom 1950429 - 1950488 6.3 1766 944 Tu 1 . + CDS 1950516 - 1950986 552 ## COG1438 Arginine repressor + Term 1950992 - 1951031 3.9 + Prom 1951173 - 1951232 9.1 1767 945 Tu 1 . + CDS 1951365 - 1951628 354 ## ECL_04619 hypothetical protein + Term 1951657 - 1951692 8.1 - Term 1951433 - 1951471 -0.0 1768 946 Op 1 . - CDS 1951685 - 1951960 312 ## COG2732 Barstar, RNAse (barnase) inhibitor 1769 946 Op 2 . - CDS 1952006 - 1953460 1756 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 1953482 - 1953541 2.5 - Term 1953501 - 1953540 4.1 1770 947 Op 1 6/0.131 - CDS 1953547 - 1955514 1804 ## COG1289 Predicted membrane protein 1771 947 Op 2 . - CDS 1955520 - 1956410 1174 ## COG1566 Multidrug resistance efflux pump 1772 947 Op 3 . - CDS 1956460 - 1956663 191 ## ROD_45731 hypothetical protein - Prom 1956767 - 1956826 5.5 + Prom 1956743 - 1956802 6.8 1773 948 Tu 1 . + CDS 1956843 - 1957769 915 ## COG0583 Transcriptional regulator + Term 1957813 - 1957841 -1.0 1774 949 Op 1 3/0.435 - CDS 1957879 - 1959324 1797 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 1775 949 Op 2 5/0.212 - CDS 1959409 - 1963209 3745 ## COG3164 Predicted membrane protein 1776 949 Op 3 8/0.052 - CDS 1963252 - 1964721 1643 ## COG1530 Ribonucleases G and E 1777 949 Op 4 7/0.083 - CDS 1964711 - 1965304 460 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 1778 949 Op 5 19/0.000 - CDS 1965314 - 1965730 305 ## COG2891 Cell shape-determining protein - Term 1965746 - 1965782 -0.9 1779 949 Op 6 22/0.000 - CDS 1965802 - 1966818 1170 ## COG1792 Cell shape-determining protein - Term 1966836 - 1966870 5.3 1780 949 Op 7 2/0.532 - CDS 1966881 - 1967924 1121 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 1967964 - 1968023 4.9 - Term 1968046 - 1968089 -0.1 1781 950 Tu 1 . - CDS 1968207 - 1970147 1234 ## COG2200 FOG: EAL domain - Prom 1970207 - 1970266 6.2 + Prom 1970145 - 1970204 3.8 1782 951 Op 1 2/0.532 + CDS 1970331 - 1971305 1001 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 1783 951 Op 2 13/0.014 + CDS 1971383 - 1972384 1108 ## COG2041 Sulfite oxidase and related enzymes 1784 952 Tu 1 . + CDS 1972532 - 1972984 450 ## COG2717 Predicted membrane protein + Term 1973017 - 1973066 3.8 + Prom 1973056 - 1973115 5.1 1785 953 Op 1 9/0.047 + CDS 1973219 - 1973671 337 ## COG0757 3-dehydroquinate dehydratase II 1786 953 Op 2 27/0.000 + CDS 1973693 - 1974157 442 ## COG0511 Biotin carboxyl carrier protein 1787 953 Op 3 6/0.131 + CDS 1974168 - 1975517 1594 ## COG0439 Biotin carboxylase + Term 1975530 - 1975570 4.3 + Prom 1975542 - 1975601 5.5 1788 954 Op 1 4/0.342 + CDS 1975626 - 1975868 308 ## COG3924 Predicted membrane protein 1789 954 Op 2 3/0.435 + CDS 1975858 - 1977309 1871 ## COG4145 Na+/panthothenate symporter 1790 954 Op 3 . + CDS 1977321 - 1978202 1476 ## PROTEIN SUPPORTED gi|228579759|ref|YP_002848103.1| ribosomal protein L11 methyltransferase + Term 1978209 - 1978242 6.1 + Prom 1978226 - 1978285 3.4 1791 955 Tu 1 . + CDS 1978340 - 1979080 736 ## COG3338 Carbonic anhydrase + Term 1979137 - 1979189 5.3 + Prom 1979215 - 1979274 3.8 1792 956 Op 1 12/0.016 + CDS 1979410 - 1980375 1082 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 1793 956 Op 2 . + CDS 1980399 - 1980695 383 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator + Prom 1980783 - 1980842 3.9 1794 957 Tu 1 . + CDS 1980867 - 1981037 112 ## ECL_04647 putative periplasmic protein + Prom 1981071 - 1981130 2.6 1795 958 Tu 1 . + CDS 1981179 - 1983263 1749 ## COG2200 FOG: EAL domain 1796 959 Tu 1 . - CDS 1983258 - 1983905 317 ## COG1309 Transcriptional regulator - Prom 1984154 - 1984213 4.8 1797 960 Op 1 27/0.000 + CDS 1984305 - 1985444 682 ## COG0845 Membrane-fusion protein 1798 960 Op 2 . + CDS 1985456 - 1988569 2869 ## COG0841 Cation/multidrug efflux pump + Term 1988583 - 1988609 1.0 + Prom 1988577 - 1988636 7.2 1799 961 Tu 1 . + CDS 1988818 - 1989039 149 ## Ent638_3706 hypothetical protein + Term 1989046 - 1989085 10.0 - 5S_RRNA 1989389 - 1989501 99.0 # CU468135 [D:168822..168941] # 5S ribosomal RNA # Erwinia tasmaniensis Et1/99 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia. - TRNA 1989546 - 1989621 88.7 # Thr GGT 0 0 1800 962 Tu 1 . + CDS 1993559 - 1994113 466 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 1994210 - 1994234 -1.0 - Term 1993995 - 1994028 4.5 1801 963 Op 1 . - CDS 1994089 - 1994337 99 ## Ent638_3712 hypothetical protein 1802 963 Op 2 8/0.052 - CDS 1994334 - 1995152 650 ## COG0169 Shikimate 5-dehydrogenase 1803 963 Op 3 6/0.131 - CDS 1995157 - 1995729 296 ## COG0009 Putative translation factor (SUA5) 1804 963 Op 4 7/0.083 - CDS 1995734 - 1996276 156 ## COG0551 Zn-finger domain associated with topoisomerase type I 1805 963 Op 5 8/0.052 - CDS 1996303 - 1996776 488 ## COG2922 Uncharacterized protein conserved in bacteria 1806 963 Op 6 . - CDS 1996748 - 1997551 146 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake + Prom 1997902 - 1997961 4.1 1807 964 Op 1 26/0.000 + CDS 1998000 - 1998509 420 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 1998579 - 1998613 7.6 + Prom 1998556 - 1998615 2.0 1808 964 Op 2 20/0.000 + CDS 1998674 - 1999480 388 ## COG0223 Methionyl-tRNA formyltransferase + Term 1999498 - 1999526 1.3 1809 964 Op 3 8/0.052 + CDS 1999557 - 2000819 963 ## COG0144 tRNA and rRNA cytosine-C5-methylases 1810 964 Op 4 7/0.083 + CDS 2000842 - 2002218 1139 ## COG0569 K+ transport systems, NAD-binding component + Term 2002222 - 2002261 7.6 + Prom 2002281 - 2002340 6.0 1811 965 Tu 1 . + CDS 2002365 - 2002778 381 ## COG1970 Large-conductance mechanosensitive channel - Term 2002676 - 2002713 -1.0 1812 966 Tu 1 2/0.532 - CDS 2002779 - 2002994 204 ## COG3036 Uncharacterized protein conserved in bacteria 1813 967 Op 1 . - CDS 2003052 - 2003477 322 ## COG0789 Predicted transcriptional regulators 1814 967 Op 2 . - CDS 2003480 - 2003848 141 ## ECL_04670 hypothetical protein - Prom 2003877 - 2003936 5.7 - Term 2003909 - 2003934 -0.5 1815 968 Op 1 50/0.000 - CDS 2003955 - 2004338 636 ## PROTEIN SUPPORTED gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 1816 968 Op 2 26/0.000 - CDS 2004379 - 2005368 962 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 1817 968 Op 3 36/0.000 - CDS 2005394 - 2006014 1030 ## PROTEIN SUPPORTED gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 1818 968 Op 4 48/0.000 - CDS 2006047 - 2006436 668 ## PROTEIN SUPPORTED gi|146313362|ref|YP_001178436.1| 30S ribosomal protein S11 1819 968 Op 5 3/0.435 - CDS 2006453 - 2006809 581 ## PROTEIN SUPPORTED gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 - Prom 2006855 - 2006914 3.9 - Term 2006885 - 2006926 8.2 1820 969 Op 1 . - CDS 2006956 - 2007072 198 ## PROTEIN SUPPORTED gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 1821 969 Op 2 53/0.000 - CDS 2007104 - 2008435 1262 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 1822 969 Op 3 48/0.000 - CDS 2008443 - 2008877 706 ## PROTEIN SUPPORTED gi|16131180|ref|NP_417760.1| 50S ribosomal subunit protein L15 1823 969 Op 4 50/0.000 - CDS 2008881 - 2009060 294 ## PROTEIN SUPPORTED gi|146313367|ref|YP_001178441.1| 50S ribosomal protein L30 1824 969 Op 5 56/0.000 - CDS 2009067 - 2009567 829 ## PROTEIN SUPPORTED gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 1825 969 Op 6 46/0.000 - CDS 2009582 - 2009935 559 ## PROTEIN SUPPORTED gi|16762859|ref|NP_458476.1| 50S ribosomal protein L18 1826 969 Op 7 55/0.000 - CDS 2009945 - 2010478 895 ## PROTEIN SUPPORTED gi|146313370|ref|YP_001178444.1| 50S ribosomal protein L6 1827 969 Op 8 50/0.000 - CDS 2010491 - 2010883 641 ## PROTEIN SUPPORTED gi|146313371|ref|YP_001178445.1| 30S ribosomal protein S8 1828 969 Op 9 50/0.000 - CDS 2010914 - 2011219 510 ## PROTEIN SUPPORTED gi|161506021|ref|YP_001573133.1| hypothetical protein SARI_04202 1829 969 Op 10 48/0.000 - CDS 2011234 - 2011773 907 ## PROTEIN SUPPORTED gi|16762855|ref|NP_458472.1| 50S ribosomal protein L5 1830 969 Op 11 57/0.000 - CDS 2011788 - 2012102 512 ## PROTEIN SUPPORTED gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 1831 969 Op 12 50/0.000 - CDS 2012113 - 2012484 618 ## PROTEIN SUPPORTED gi|152972217|ref|YP_001337363.1| 50S ribosomal protein L14 - Prom 2012558 - 2012617 7.8 - Term 2012586 - 2012629 10.3 1832 970 Op 1 50/0.000 - CDS 2012651 - 2012905 425 ## PROTEIN SUPPORTED gi|152972218|ref|YP_001337364.1| 30S ribosomal protein S17 1833 970 Op 2 50/0.000 - CDS 2012905 - 2013096 295 ## PROTEIN SUPPORTED gi|152972219|ref|YP_001337365.1| 50S ribosomal protein L29 1834 970 Op 3 50/0.000 - CDS 2013096 - 2013506 696 ## PROTEIN SUPPORTED gi|146313378|ref|YP_001178452.1| 50S ribosomal protein L16 1835 970 Op 4 61/0.000 - CDS 2013519 - 2014220 1183 ## PROTEIN SUPPORTED gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 1836 970 Op 5 59/0.000 - CDS 2014238 - 2014570 536 ## PROTEIN SUPPORTED gi|152972222|ref|YP_001337368.1| 50S ribosomal protein L22 1837 970 Op 6 60/0.000 - CDS 2014585 - 2014863 484 ## PROTEIN SUPPORTED gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 1838 970 Op 7 61/0.000 - CDS 2014880 - 2015701 1432 ## PROTEIN SUPPORTED gi|16762846|ref|NP_458463.1| 50S ribosomal protein L2 1839 970 Op 8 61/0.000 - CDS 2015719 - 2016021 491 ## PROTEIN SUPPORTED gi|16762845|ref|NP_458462.1| 50S ribosomal protein L23 1840 970 Op 9 58/0.000 - CDS 2016018 - 2016623 992 ## PROTEIN SUPPORTED gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 1841 970 Op 10 40/0.000 - CDS 2016634 - 2017263 1051 ## PROTEIN SUPPORTED gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 1842 970 Op 11 . - CDS 2017296 - 2017607 514 ## PROTEIN SUPPORTED gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 - Prom 2017776 - 2017835 5.4 1843 971 Tu 1 . + CDS 2017952 - 2018461 256 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 1844 972 Op 1 9/0.047 - CDS 2018445 - 2018921 582 ## COG2193 Bacterioferritin (cytochrome b1) 1845 972 Op 2 . - CDS 2018994 - 2019188 140 ## COG2906 Bacterioferritin-associated ferredoxin - Prom 2019339 - 2019398 17.1 1846 973 Op 1 51/0.000 - CDS 2020412 - 2022526 1968 ## COG0480 Translation elongation factors (GTPases) 1847 973 Op 2 56/0.000 - CDS 2022623 - 2023093 774 ## PROTEIN SUPPORTED gi|206576912|ref|YP_002236273.1| ribosomal protein S7 - Prom 2023129 - 2023188 2.1 1848 973 Op 3 7/0.083 - CDS 2023190 - 2023564 646 ## PROTEIN SUPPORTED gi|15803855|ref|NP_289889.1| 30S ribosomal protein S12 - Prom 2023628 - 2023687 4.0 - Term 2023600 - 2023634 1.5 1849 974 Op 1 10/0.036 - CDS 2023689 - 2023976 293 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur 1850 974 Op 2 13/0.014 - CDS 2023984 - 2024343 319 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 1851 974 Op 3 6/0.131 - CDS 2024343 - 2024714 486 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 1852 974 Op 4 6/0.131 - CDS 2024729 - 2025451 732 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 2025552 - 2025611 7.0 - Term 2025567 - 2025614 8.1 1853 975 Tu 1 . - CDS 2025619 - 2026437 996 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 2026488 - 2026547 3.2 + Prom 2026547 - 2026606 2.4 1854 976 Tu 1 . + CDS 2026676 - 2026894 237 ## COG2900 Uncharacterized protein conserved in bacteria + Term 2026899 - 2026940 8.6 - Term 2026895 - 2026921 1.0 1855 977 Tu 1 4/0.342 - CDS 2026946 - 2027554 690 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 - Prom 2027583 - 2027642 4.7 - Term 2027568 - 2027612 3.1 1856 978 Op 1 3/0.435 - CDS 2027649 - 2027849 154 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 1857 978 Op 2 7/0.083 - CDS 2027863 - 2029668 1053 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 1858 978 Op 3 . - CDS 2029668 - 2030219 639 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 2030302 - 2030361 4.4 + Prom 2030219 - 2030278 2.6 1859 979 Op 1 . + CDS 2030352 - 2032256 2615 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 1860 979 Op 2 . + CDS 2032272 - 2033204 896 ## COG0583 Transcriptional regulator - Term 2033044 - 2033079 2.9 1861 980 Op 1 . - CDS 2033300 - 2034196 1018 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 1862 980 Op 2 . - CDS 2034196 - 2034813 578 ## ECL_04721 phosphoribosyl-dephospho-CoA transferase 1863 980 Op 3 . - CDS 2034816 - 2035775 1296 ## COG0679 Predicted permeases 1864 981 Op 1 . - CDS 2035899 - 2036699 1096 ## ECL_04723 malonate decarboxylase gamma subunit 1865 981 Op 2 . - CDS 2036699 - 2037532 1336 ## COG0777 Acetyl-CoA carboxylase beta subunit 1866 981 Op 3 . - CDS 2037525 - 2037824 367 ## ECL_04725 malonate decarboxylase delta subunit 1867 981 Op 4 . - CDS 2037834 - 2038691 838 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 1868 981 Op 5 . - CDS 2038691 - 2040346 1963 ## ECL_04727 putative malonate decarboxylase, alpha subunit + Prom 2040477 - 2040536 4.8 1869 982 Op 1 5/0.212 + CDS 2040575 - 2041597 1057 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 1870 982 Op 2 6/0.131 + CDS 2041594 - 2041812 248 ## COG3089 Uncharacterized protein conserved in bacteria 1871 982 Op 3 . + CDS 2041843 - 2042712 1109 ## COG3954 Phosphoribulokinase + Term 2042916 - 2042958 -0.4 1872 983 Tu 1 . - CDS 2042799 - 2043203 411 ## COG1765 Predicted redox protein, regulator of disulfide bond formation - Prom 2043230 - 2043289 5.9 1873 984 Op 1 4/0.342 + CDS 2043514 - 2044146 700 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 2044150 - 2044203 12.3 1874 984 Op 2 . + CDS 2044204 - 2046291 2336 ## COG1289 Predicted membrane protein + Term 2046427 - 2046465 0.6 - Term 2046191 - 2046231 4.6 1875 985 Op 1 5/0.212 - CDS 2046288 - 2047523 1472 ## COG4992 Ornithine/acetylornithine aminotransferase 1876 985 Op 2 4/0.342 - CDS 2047596 - 2048159 670 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 1877 985 Op 3 . - CDS 2048190 - 2048774 440 ## COG2184 Protein involved in cell division - Prom 2048800 - 2048859 3.1 - Term 2048838 - 2048870 3.9 1878 986 Tu 1 . - CDS 2048882 - 2049454 661 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 2049532 - 2049591 5.2 + Prom 2049627 - 2049686 5.2 1879 987 Tu 1 . + CDS 2049733 - 2050917 1613 ## COG0477 Permeases of the major facilitator superfamily + Term 2050927 - 2050961 4.5 + Prom 2050980 - 2051039 2.0 1880 988 Op 1 14/0.011 + CDS 2051179 - 2053722 3276 ## COG1251 NAD(P)H-nitrite reductase 1881 988 Op 2 2/0.532 + CDS 2053719 - 2054045 419 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 1882 989 Tu 1 . + CDS 2054180 - 2055553 1505 ## COG0007 Uroporphyrinogen-III methylase + Term 2055571 - 2055610 6.7 + Prom 2055582 - 2055641 3.0 1883 990 Tu 1 . + CDS 2055697 - 2055867 117 ## ECL_04745 putative outer membrane lipoprotein + Term 2055882 - 2055925 8.1 - Term 2055879 - 2055905 -0.7 1884 991 Op 1 6/0.131 - CDS 2055964 - 2056968 1502 ## COG0180 Tryptophanyl-tRNA synthetase 1885 991 Op 2 9/0.047 - CDS 2056961 - 2057722 903 ## COG0546 Predicted phosphatases 1886 991 Op 3 6/0.131 - CDS 2057715 - 2058392 1047 ## COG0036 Pentose-5-phosphate-3-epimerase 1887 991 Op 4 6/0.131 - CDS 2058432 - 2059244 911 ## COG0338 Site-specific DNA methylase 1888 991 Op 5 7/0.083 - CDS 2059312 - 2060601 1095 ## COG3266 Uncharacterized protein conserved in bacteria - Term 2060647 - 2060678 -0.8 1889 991 Op 6 20/0.000 - CDS 2060694 - 2061782 931 ## COG0337 3-dehydroquinate synthetase 1890 991 Op 7 8/0.052 - CDS 2061840 - 2062361 504 ## COG0703 Shikimate kinase - Prom 2062469 - 2062528 3.9 1891 992 Tu 1 . - CDS 2062648 - 2063946 1293 ## COG4796 Type II secretory pathway, component HofQ - Term 2064126 - 2064179 0.5 1892 993 Op 1 . - CDS 2064192 - 2064653 185 ## Ent638_3806 hypothetical protein 1893 993 Op 2 . - CDS 2064657 - 2065148 389 ## COG3166 Tfp pilus assembly protein PilN 1894 993 Op 3 . - CDS 2065148 - 2065921 459 ## ECL_04758 pilus assembly protein HofM - Prom 2066009 - 2066068 1.6 + Prom 2066005 - 2066064 2.2 1895 994 Tu 1 . + CDS 2066183 - 2068594 2742 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Term 2068654 - 2068684 3.4 - Term 2068596 - 2068635 5.2 1896 995 Tu 1 . - CDS 2068688 - 2069248 746 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 2069333 - 2069392 5.8 + Prom 2069361 - 2069420 4.5 1897 996 Op 1 . + CDS 2069576 - 2071714 2158 ## Ent638_3811 intracellular growth attenuator IgaA + Term 2071721 - 2071763 3.4 1898 996 Op 2 4/0.342 + CDS 2071779 - 2072462 642 ## COG1011 Predicted hydrolase (HAD superfamily) 1899 996 Op 3 3/0.435 + CDS 2072459 - 2072860 343 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 1900 996 Op 4 3/0.435 + CDS 2072885 - 2073763 1123 ## COG1281 Disulfide bond chaperones of the HSP33 family + Term 2073782 - 2073820 9.1 + Prom 2074067 - 2074126 4.2 1901 997 Tu 1 . + CDS 2074154 - 2075773 2173 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) - Term 2075811 - 2075846 8.5 1902 998 Op 1 40/0.000 - CDS 2075863 - 2077200 1553 ## COG0642 Signal transduction histidine kinase 1903 998 Op 2 . - CDS 2077206 - 2077925 1038 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2077960 - 2078019 5.2 + Prom 2078065 - 2078124 2.3 1904 999 Op 1 1/0.649 + CDS 2078154 - 2078627 628 ## COG0782 Transcription elongation factor 1905 999 Op 2 4/0.342 + CDS 2078715 - 2081045 1627 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein 1906 1000 Op 1 22/0.000 + CDS 2081396 - 2081623 201 ## COG1918 Fe2+ transport system protein A 1907 1000 Op 2 . + CDS 2081654 - 2083972 2999 ## COG0370 Fe2+ transport system protein B 1908 1000 Op 3 . + CDS 2083985 - 2084221 336 ## ECL_04775 hypothetical protein - Term 2084128 - 2084161 2.0 1909 1001 Tu 1 . - CDS 2084196 - 2084978 705 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 2085008 - 2085067 2.3 + Prom 2084936 - 2084995 1.7 1910 1002 Op 1 5/0.212 + CDS 2085015 - 2085695 140 ## COG1040 Predicted amidophosphoribosyltransferases 1911 1002 Op 2 3/0.435 + CDS 2085757 - 2086332 726 ## COG0694 Thioredoxin-like proteins and domains + Prom 2086527 - 2086586 4.9 1912 1003 Tu 1 . + CDS 2086698 - 2088014 1811 ## COG2610 H+/gluconate symporter and related permeases - Term 2088011 - 2088050 -1.0 1913 1004 Op 1 7/0.083 - CDS 2088103 - 2090184 2459 ## COG1640 4-alpha-glucanotransferase 1914 1004 Op 2 . - CDS 2090194 - 2092587 3397 ## COG0058 Glucan phosphorylase - Prom 2092691 - 2092750 3.4 + Prom 2092863 - 2092922 3.1 1915 1005 Tu 1 . + CDS 2093159 - 2095864 3186 ## COG2909 ATP-dependent transcriptional regulator - Term 2095777 - 2095832 4.8 1916 1006 Op 1 6/0.131 - CDS 2095927 - 2096685 1018 ## COG1349 Transcriptional regulators of sugar metabolism 1917 1006 Op 2 4/0.342 - CDS 2096702 - 2097532 853 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 1918 1006 Op 3 . - CDS 2097580 - 2097912 455 ## COG0607 Rhodanese-related sulfurtransferase - Prom 2098013 - 2098072 4.9 + Prom 2097999 - 2098058 6.8 1919 1007 Tu 1 . + CDS 2098101 - 2099609 2052 ## COG0578 Glycerol-3-phosphate dehydrogenase + Term 2099663 - 2099702 1.0 - Term 2099607 - 2099646 0.4 1920 1008 Op 1 10/0.036 - CDS 2099695 - 2102142 3333 ## COG0058 Glucan phosphorylase 1921 1008 Op 2 17/0.000 - CDS 2102161 - 2103594 1500 ## COG0297 Glycogen synthase 1922 1008 Op 3 7/0.083 - CDS 2103594 - 2104889 1246 ## COG0448 ADP-glucose pyrophosphorylase 1923 1008 Op 4 9/0.047 - CDS 2104907 - 2106880 1649 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 1924 1008 Op 5 4/0.342 - CDS 2106877 - 2109063 2920 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 2109185 - 2109244 3.7 - Term 2109256 - 2109286 4.3 1925 1009 Tu 1 . - CDS 2109303 - 2110406 1656 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 2110468 - 2110527 4.7 + Prom 2110496 - 2110555 3.0 1926 1010 Tu 1 . + CDS 2110585 - 2111178 800 ## COG2095 Multiple antibiotic transporter + Term 2111186 - 2111228 6.5 1927 1011 Op 1 4/0.342 - CDS 2111719 - 2112984 1799 ## COG2610 H+/gluconate symporter and related permeases - Term 2112997 - 2113034 1.3 1928 1011 Op 2 1/0.649 - CDS 2113063 - 2113551 583 ## COG3265 Gluconate kinase - Prom 2113629 - 2113688 2.0 1929 1012 Tu 1 4/0.342 - CDS 2113717 - 2114712 1110 ## COG1609 Transcriptional regulators - Prom 2114740 - 2114799 2.3 - Term 2114753 - 2114796 10.0 1930 1013 Op 1 5/0.212 - CDS 2114804 - 2115499 993 ## COG1741 Pirin-related protein - Prom 2115548 - 2115607 1.9 - Term 2115562 - 2115609 -0.3 1931 1013 Op 2 . - CDS 2115623 - 2116660 1195 ## COG0673 Predicted dehydrogenases and related proteins - Prom 2116848 - 2116907 4.3 + Prom 2116873 - 2116932 3.2 1932 1014 Tu 1 . + CDS 2116970 - 2117458 342 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase 1933 1015 Tu 1 . - CDS 2117544 - 2119289 2124 ## COG0405 Gamma-glutamyltransferase + Prom 2119330 - 2119389 2.0 1934 1016 Tu 1 . + CDS 2119412 - 2119783 566 ## ECL_04806 hypothetical protein + Term 2119831 - 2119874 6.1 - Term 2119586 - 2119618 1.5 1935 1017 Op 1 4/0.342 - CDS 2119773 - 2120513 956 ## COG0584 Glycerophosphoryl diester phosphodiesterase 1936 1017 Op 2 21/0.000 - CDS 2120510 - 2121580 1356 ## COG3839 ABC-type sugar transport systems, ATPase components 1937 1017 Op 3 38/0.000 - CDS 2121582 - 2122427 1267 ## COG0395 ABC-type sugar transport system, permease component 1938 1017 Op 4 35/0.000 - CDS 2122424 - 2123311 1184 ## COG1175 ABC-type sugar transport systems, permease components - Prom 2123333 - 2123392 1.8 1939 1017 Op 5 . - CDS 2123428 - 2124744 1917 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 2124768 - 2124827 1.6 - Term 2124953 - 2125002 0.5 1940 1018 Op 1 18/0.000 - CDS 2125009 - 2125722 266 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1941 1018 Op 2 19/0.000 - CDS 2125724 - 2126491 265 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 1942 1018 Op 3 24/0.000 - CDS 2126488 - 2127765 2005 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 1943 1018 Op 4 20/0.000 - CDS 2127762 - 2128688 1408 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 1944 1018 Op 5 . - CDS 2128735 - 2129844 1443 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 2130008 - 2130067 4.4 + Prom 2130183 - 2130242 4.8 1945 1019 Tu 1 . + CDS 2130269 - 2130652 543 ## ECL_04819 hypothetical protein - Term 2130647 - 2130686 5.2 1946 1020 Tu 1 . - CDS 2130830 - 2131927 1565 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 2132049 - 2132108 7.7 - Term 2132081 - 2132116 3.9 1947 1021 Tu 1 . - CDS 2132125 - 2133330 1437 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 2133463 - 2133522 2.8 - Term 2133463 - 2133511 8.8 1948 1022 Tu 1 . - CDS 2133526 - 2134383 1128 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 2134483 - 2134542 5.3 - Term 2134541 - 2134592 1.5 1949 1023 Op 1 28/0.000 - CDS 2134634 - 2135671 1145 ## COG2177 Cell division protein 1950 1023 Op 2 9/0.047 - CDS 2135682 - 2136347 349 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 1951 1023 Op 3 . - CDS 2136350 - 2137825 751 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 2137865 - 2137924 5.5 + Prom 2137787 - 2137846 5.7 1952 1024 Op 1 6/0.131 + CDS 2137952 - 2138554 586 ## COG0742 N6-adenine-specific methylase 1953 1024 Op 2 . + CDS 2138538 - 2138819 449 ## COG3776 Predicted membrane protein - Term 2138812 - 2138865 1.4 1954 1025 Tu 1 . - CDS 2138915 - 2139274 447 ## ECIAI1_3614 hypothetical protein - Prom 2139298 - 2139357 3.6 + Prom 2139305 - 2139364 2.8 1955 1026 Op 1 5/0.212 + CDS 2139404 - 2140030 819 ## COG3714 Predicted membrane protein + Term 2140042 - 2140073 3.4 1956 1026 Op 2 . + CDS 2140107 - 2142278 2574 ## COG2217 Cation transport ATPase + Term 2142281 - 2142322 7.0 - Term 2142271 - 2142307 8.2 1957 1027 Op 1 11/0.023 - CDS 2142368 - 2143654 988 ## PROTEIN SUPPORTED gi|90020581|ref|YP_526408.1| ribosomal protein L16 1958 1027 Op 2 11/0.023 - CDS 2143665 - 2144174 665 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 1959 1027 Op 3 . - CDS 2144187 - 2145158 460 ## PROTEIN SUPPORTED gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 - Prom 2145267 - 2145326 4.6 1960 1028 Tu 1 . - CDS 2145339 - 2145581 195 ## COG0425 Predicted redox protein, regulator of disulfide bond formation - Prom 2145722 - 2145781 4.1 + Prom 2145645 - 2145704 3.7 1961 1029 Op 1 . + CDS 2145751 - 2146416 807 ## COG1738 Uncharacterized conserved protein 1962 1029 Op 2 . + CDS 2146489 - 2147046 847 ## ECL_04837 hypothetical protein + Term 2147064 - 2147105 10.0 1963 1030 Tu 1 . + CDS 2147182 - 2148231 1298 ## COG0628 Predicted permease + Prom 2148239 - 2148298 1.7 1964 1031 Op 1 . + CDS 2148357 - 2149079 656 ## ECL_04840 hypothetical protein 1965 1031 Op 2 4/0.342 + CDS 2149076 - 2149891 775 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 1966 1031 Op 3 4/0.342 + CDS 2149872 - 2150129 332 ## COG0236 Acyl carrier protein 1967 1031 Op 4 3/0.435 + CDS 2150141 - 2150392 310 ## COG0236 Acyl carrier protein 1968 1031 Op 5 3/0.435 + CDS 2150403 - 2150963 606 ## COG4648 Predicted membrane protein 1969 1031 Op 6 2/0.532 + CDS 2150956 - 2152302 1271 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 1970 1031 Op 7 3/0.435 + CDS 2152289 - 2152639 330 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 1971 1031 Op 8 2/0.532 + CDS 2152630 - 2154321 1601 ## COG4261 Predicted acyltransferase 1972 1031 Op 9 . + CDS 2154325 - 2154747 533 ## COG0824 Predicted thioesterase 1973 1031 Op 10 . + CDS 2154744 - 2155310 734 ## Ent638_3893 outer membrane lipoprotein carrier protein LolA 1974 1031 Op 11 . + CDS 2155314 - 2157635 2871 ## COG4258 Predicted exporter 1975 1031 Op 12 . + CDS 2157632 - 2158210 620 ## ECL_04851 lipoprotein 1976 1031 Op 13 3/0.435 + CDS 2158212 - 2159378 1475 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 1977 1031 Op 14 4/0.342 + CDS 2159378 - 2159851 445 ## COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 1978 1031 Op 15 11/0.023 + CDS 2159848 - 2160576 903 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1979 1031 Op 16 2/0.532 + CDS 2160573 - 2161802 1298 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 1980 1031 Op 17 . + CDS 2161805 - 2162398 560 ## COG2091 Phosphopantetheinyl transferase + Term 2162634 - 2162671 2.6 - Term 2162391 - 2162432 10.2 1981 1032 Tu 1 . - CDS 2162458 - 2162964 685 ## COG3479 Phenolic acid decarboxylase - Prom 2162986 - 2163045 2.1 + Prom 2162959 - 2163018 3.7 1982 1033 Op 1 3/0.435 + CDS 2163064 - 2163945 846 ## COG0583 Transcriptional regulator 1983 1033 Op 2 . + CDS 2163977 - 2164771 862 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Prom 2164789 - 2164848 2.9 1984 1034 Tu 1 . + CDS 2164878 - 2165540 711 ## COG0560 Phosphoserine phosphatase 1985 1035 Tu 1 . - CDS 2165601 - 2166626 1437 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 2166837 - 2166896 2.9 + Prom 2166840 - 2166899 4.3 1986 1036 Tu 1 . + CDS 2167013 - 2168290 1268 ## COG0477 Permeases of the major facilitator superfamily + Term 2168302 - 2168332 3.0 - Term 2168284 - 2168325 9.6 1987 1037 Tu 1 . - CDS 2168327 - 2169064 722 ## COG1414 Transcriptional regulator - Prom 2169085 - 2169144 5.5 + Prom 2169154 - 2169213 2.6 1988 1038 Op 1 . + CDS 2169234 - 2169926 623 ## COG0684 Demethylmenaquinone methyltransferase 1989 1038 Op 2 . + CDS 2169926 - 2170873 616 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases Predicted protein(s) >gi|333596725|gb|GL892087.1| GENE 1 81 - 1007 1007 308 aa, chain + ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 1 307 1 306 316 543 88.0 1e-154 MNKLDAFIQHAVSSVPVSGTSLISSLYGDALSHRGGEIWLGSLAALLEGMGFGERFVRTA LFRLNKEGWLDVSRIGRRSFYRLSDKGLRLTRRAENKIYRAELPAWDGKWLLLLSEGLDK TTLADVKKQLIWQGFGTLAPSLMASPSQNLADVQSLLHDAGVAENVIFFEAHSPLALSRV ALRSRVEECWQLTEQNAMYETFINSFRPLLPLLKEASPEDLTPERCFQIQLLLIHFYRRV VLKDPLLPEELLPAHWAGQNARQLCINIYQRVAAGALAFVSEKGETSVGELPAPGTLYHQ RFGGLNIT >gi|333596725|gb|GL892087.1| GENE 2 1017 - 1622 757 201 aa, chain + ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 195 1 195 196 367 93.0 1e-102 MPVYQIDGLTPVVPEESYVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGATIGENSIVGAAAF VKAKAEMPANHLILGSPAKAIRELSAQEIEWKKQGTREYQVLVDRCKQTLHQVEPLREEE PGRKRLVFDENLRPKSAGRDK >gi|333596725|gb|GL892087.1| GENE 3 1804 - 3801 2146 665 aa, chain + ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 8 665 4 661 661 874 66.0 0 MSENETIPKQSKSQINKAVFYTSALLIFLLVAFAAIFPDVADKNFKLLQQQIFTNASWFY ILAVALILLSVTFLGLSRYGDIKLGPDHSQPDFSYHSWFAMLFSAGMGIGLMFFGVAEPV MHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSAL YPIIGDRIHGPIGHAVDIFAVIGTVFGVATSLGYGVLQVNAGLNHLFGVPISETVQVILI VVITGLATVSVVSGLDKGIRILSELNLGLAVLLLALVLCLGPTVLLLKSFVENTGGYLSE LVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWSPFVGMFIARVSRGRTIREFVTGVLFV PAGFTLMWMTVFGNSAIYLIMNEGAADLANTVQQDVALALFNFLEHFPFSSVLSFIAMAM VIVFFVTSADSGAMVVDTLASGGEANTPVWQRIFWAALMGVVAIALLLAGGLSALQTVTI ASALPFSVILLISIYGLLKALRRDLTKRESLSMANIAPTAARNPIPWQRRLRNIAYLPKR SLVKRFMDEVIRQAMVLVQEELNKQGTQSHISDASDDRIRLEVDLGNELNFIYEVRLRGY NSPTFALAAIENDENQAEQHRYYRAEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHF LHLVR >gi|333596725|gb|GL892087.1| GENE 4 3857 - 4582 673 241 aa, chain - ## HITS:1 COG:no KEGG:ROD_12291 NR:ns ## KEGG: ROD_12291 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 241 10 250 253 429 91.0 1e-119 MVCGYWYTSRDLSTRFKIKRSFGWDVYFLVALYGCIFVLQGVIATGLLWLLLFALSAADN TFHFTSAKYADWQIDFMNWSFLGIQAPVVVMLAFAILFCLYRSNWAGSARLDGEGRKKLY KRLAQSSGIEQLLYQCMEEGELAHVTLKSRRIYIGMIHTATLEYEKTANIVLIPMLSGYR DGKSMQLCIEHNYSKWYAEHDITLDSEPKSAMDFRKVIMLDQIESISLFDPASASALAMR E >gi|333596725|gb|GL892087.1| GENE 5 4611 - 4808 163 65 aa, chain - ## HITS:1 COG:no KEGG:ECL_02107 NR:ns ## KEGG: ECL_02107 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 65 1 65 65 101 86.0 1e-20 MKNLLMALFSSPESLLQVMSHQEIIEAVEDGDRIIIDQDGSASVNYKSNEVRRDFLRHVN ALKRA >gi|333596725|gb|GL892087.1| GENE 6 5067 - 5501 429 144 aa, chain + ## HITS:1 COG:no KEGG:ECL_02106 NR:ns ## KEGG: ECL_02106 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 144 1 144 144 245 78.0 4e-64 MSTLPSVISRFVDYYATLDTQPPSALAEIYRADATLIDPFGEHNGMFAIQRYFTHLLANV QHCRFTVDAPLQQGDRFVVTWMMHWSHPRIARGAMRQLPGCSVVDMRDDRIVRQRDYYDA GEMIYEHLPVLGWAVRGVKRRVQS >gi|333596725|gb|GL892087.1| GENE 7 5498 - 6217 326 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 3 236 6 251 259 130 36 3e-28 MKTVLITGASSGIGAGLAKSFADDGYRVIACGRDAQRLAALHQHSPHITVRLFDMTDRDA CRQALADCAADTVILCAGTCEYLDRGAVDAALVARVMTTNFIGPVNCLAALQPQLVSGNR VVLVSSMAHWLHFPRAEAYGASKAALTWFADTLRLDWKPKGIAVTVVSPGFVDTPLTRKN DFPMPGRVSVEHAVHAIRRGLAKGKDHIAFPAGFSLALRLLSGLPDVLQRALLRRMVRP >gi|333596725|gb|GL892087.1| GENE 8 6214 - 7473 1167 419 aa, chain + ## HITS:1 COG:VC1120 KEGG:ns NR:ns ## COG: VC1120 COG2907 # Protein_GI_number: 15641133 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Vibrio cholerae # 1 415 2 416 426 486 55.0 1e-137 MKIAIIGSGIAGLTCAWRLAGHHQVTLFEAQAAPGGHTATVDVDTPQGTFAIDTGFIVYN DRTYPRFMGLLSELGISGQKTQMSFSVHNPQSGLEYNGHTLTSLFAQRRNLLNPAFWTLL KEIVRFNRLAKQTLQGEVDGSATLETFLHQHRFTPFFARHYILPMGAAIWSSSLQEMKRF PLPLFLRFFENHGLLDITHRPQWYVVPGGSREYIRAMLDTLGDRLTLHLNAPVQQVIRHD RGVDIAREGVTDTFDQVIFACHSAQALAMLASPTQAEREVLGDIGWQRNEVVLHSDPRWL PVRERAWASWNYRLSEQDQASACVTYNMNILQGLPPGCPLFCVTLNPETPVDERFVLRRF VYEHPLFNPKSWHAQARRGEINGHQRSWFCGAYWYNGFHEDGVRSALDVVNAIAAGEGN >gi|333596725|gb|GL892087.1| GENE 9 7475 - 8197 537 240 aa, chain + ## HITS:1 COG:VC1121 KEGG:ns NR:ns ## COG: VC1121 COG3496 # Protein_GI_number: 15641134 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 3 233 12 255 269 204 46.0 1e-52 MNSCLYHGTLRHRRLAPKAHHFTYSVFMAWLDLDELDALPSVGVRRNRVAPAAFYDADYP LGTPLKENALTRLENLTGERPAGRVMLLTQLRYFGFHFNPVNFYYCYDGEGTLRWVLAEV RNTPWNERHYYAVAGQNAQPTAKAFHVSPFNPMDMVYHWRFNSPDSTLRMHIENHQETKV FDATLTLRREPLTRATLRSRLARIPLMTLKTVFAIYWQALRLWLKRVPLHNHPLSRSERS >gi|333596725|gb|GL892087.1| GENE 10 8194 - 9414 1318 406 aa, chain + ## HITS:1 COG:VC1122 KEGG:ns NR:ns ## COG: VC1122 COG2230 # Protein_GI_number: 15641135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Vibrio cholerae # 19 405 39 431 432 426 55.0 1e-119 MTDPVFALEPDIPRNVRVARWLLFRLLNGLRGGSLTLREGAQTFHFGDASAALHAEVQVL APGVYWRILTGGSLAAAEAWMDGEWETTHLTPLLELIARNSQILGKLEKGFRLLGKPVER LRHWMRRNSRAQARENIAAHYDLGNTFYAHFLDEHLLYSSALFSGEEQDLTAAQQAKMAR LCDQLALTANDHLLEIGTGWGAMAEYAARHYGCRVTTTTLSQEQYHWATARIARAGLQDR VEVLLCDYRDLTGVYDKLVSVEMIEAVGQRYLPTFFRTCQARLRPGGRMAIQAITIQDQR YRDYSKSVDFIQRYIFPGGFLPSITAMNELMTRHTDFVVRNLFDMGPDYARTLAHWRQRF VHAWQEIEQLGFDERFRRMWLYYLGYCEAGFNARTISVVQLTAERV >gi|333596725|gb|GL892087.1| GENE 11 9411 - 9896 595 161 aa, chain + ## HITS:1 COG:no KEGG:ECL_02101 NR:ns ## KEGG: ECL_02101 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 161 1 161 161 192 82.0 3e-48 MKRYGQVFLLAIGFDLYWTLVVLFREQGLVIWIALAVLAWLLLPPAYRVYALVLAASGAL LDALWALTGLIAFTGASLMPLWMVALWLMFATVWTQLTRTTTLPGWLLTVLATLGGPVAY LIGERLGAITFLEPTFIVVSWMFPGWLVLMLFFHLLMGRQQ >gi|333596725|gb|GL892087.1| GENE 12 9911 - 10417 466 168 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1485 NR:ns ## KEGG: Ent638_1485 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 168 8 175 175 236 73.0 3e-61 MLALSVFTCSAQAADWLSWRKVGDATLTWGPFTVYTSQLLTPDGRYTGLDRDNALIITYA RDIDGDDLVEATRDQWQAQGILQQEPQSEAWLRMLKALWPDVTSGTQLAFVVNNGQGQFW YRPSAAQKKFTPLGPRQTAAFSSRFLAIWLDPRTEYPELRQQLTGGPK >gi|333596725|gb|GL892087.1| GENE 13 10414 - 10947 627 177 aa, chain + ## HITS:1 COG:no KEGG:ECL_02099 NR:ns ## KEGG: ECL_02099 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 174 1 174 175 323 91.0 2e-87 MKRFLLMALALTMLVAGCSTEVTEYRQQQPRLDIFTYFQGKTEAWGMVQDRSGKQIRRFH VEIAGDVIGDTLTLNEHFVYDDGEKQQRVWHIRRVGQDRYEGTAGDIEGIATGQAAGNAL NWRYSMNVKADGKTWLLHFDDWMYLQDSTHLFNKTEMKKFGVTVATVTLFFTRKDGG >gi|333596725|gb|GL892087.1| GENE 14 10944 - 11402 600 152 aa, chain - ## HITS:1 COG:no KEGG:Dd1591_2577 NR:ns ## KEGG: Dd1591_2577 # Name: not_defined # Def: hypothetical protein # Organism: D.zeae # Pathway: not_defined # 1 148 1 148 183 219 84.0 2e-56 MTVIMIILAVIGGATLSIQAAINGQLGGNVGVFKSAFLTFSVGALVTALLIFFFEPKQAV SLMDVPKWQLLGALCGVPYIVIMVLAVQRIGTAVATVAVILGQLAMSMLIDNFGWLNNEA IPFSMSRLGAVVCLSIALFFIYSSSKPRPEGD >gi|333596725|gb|GL892087.1| GENE 15 11407 - 11841 609 144 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1093 NR:ns ## KEGG: Ent638_1093 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 144 1 144 144 201 86.0 5e-51 MHIILILLVIAGGMGLSVEAGLLGPLGAEVGDLWAAFSIFSVGTGLTFLLMLFFSPRNSP SFFAQPSWHLLGGVLGPVYVIILTIATPAIGIAMTMIGILAGQVFKSLIIDHYGLLGTPH RRIDTKRIIALGFIIAALILVAQG >gi|333596725|gb|GL892087.1| GENE 16 11939 - 12871 832 310 aa, chain + ## HITS:1 COG:HI1364 KEGG:ns NR:ns ## COG: HI1364 COG0583 # Protein_GI_number: 16273274 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Haemophilus influenzae # 9 294 4 284 288 180 34.0 3e-45 MMDAGHISIRALLIFIDVYETQNFSMVARREGISASQVSRVIHQLEDALGQQLFYRNTRA IIPTESGHLFVRYARAMAGNLEDARRELDERAREPSGTLRINGPVFFGQRHIAPGLPGLL ARYPRLSVELTLTDDFIDPHRDAADVIFRIGALTDSSFHARVFGQQFYHLAASPDYLQKY GAPEGPDDLSRHHCLVYRGSSGPNRWLIRQPGEAWVHYPVVPLMTSNNAETLLIAALGGM GIVLFPDWMVSERLKSGELVALLPERECSINTEPLTIAAIYPNARHPPLNVRAVIDYYIE RFGTPLYWQT >gi|333596725|gb|GL892087.1| GENE 17 12875 - 13903 1228 342 aa, chain - ## HITS:1 COG:AGl2018 KEGG:ns NR:ns ## COG: AGl2018 COG0620 # Protein_GI_number: 15891128 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 341 1 341 342 624 89.0 1e-179 MKTLLPTSTAGSLPKPTWLAQPETLWSPWKLQDDELLAGKQDALRLSLDEQIRAGIDIVS DGEQTRQHFVTTFIEHLSGVDFENRQTVRIRNRYDASVPTVVDAVARQKPVFVDDAKYLR QLTDKPIKWALPGPMTMIDTLYDAHYKSREKLAWEFAKILNQEARELEAAGVDIIQFDEP AFNVFFDEVNDWGIAALERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEWRQYEEAFP KLQTSKIDIISLECHNSRVPMDLLELIRGKKVMVGAIDVATQTIETPEEVADTLRKALQF VDADKLYPSTNCGMAPLSRQVANGKLKALSAGAEIIRRELAR >gi|333596725|gb|GL892087.1| GENE 18 13931 - 14905 988 324 aa, chain - ## HITS:1 COG:no KEGG:ECL_02094 NR:ns ## KEGG: ECL_02094 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 322 1 322 324 566 87.0 1e-160 MSQAFTFTLKRSCFDENYNPSENTRTTTNFANLARGEKRQENLRNTLVMINNRFNALASW DNPKADRYAVELEIISVDMNIGGDFTFPAIEILQTTIVDKKTHERIEGIVGNNFSSYVRD YDFSVLLLEHNKDRPRFTLPENFGELHGNIFKSFIHSAEYQANFKKAPVICLSVSSKDTY RRTGNHHPVLGFEYQPDGESLTEQYFAKMGLKVRYFMPENSVAPFAFFFTGDLLRDYTNL ELIGTISTMETFQKIYRPEIYNANSAAGQCYQPDLNQQDHSLTKIVYDREERSRLAIEQG KYTEERFIKPYKAFLEQWSHHFTL >gi|333596725|gb|GL892087.1| GENE 19 15074 - 15613 812 179 aa, chain + ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 249 83.0 2e-66 MTKLTLQEQMLKAGLVSSKKVAKVQRTAKKSRVQAREAREAVEENKKAQLERDRQLSEQQ KQAVLAKEFKAQVKQLIEMNRITVAKGNITFNFTDGNLIKKIEVDKQTQTQLINGRLAIA RLVINAQGDCEYAIIPAVVADKIAQRDADSIVLNSALSQEEQDEDDPYADFKIPDDLMW >gi|333596725|gb|GL892087.1| GENE 20 15621 - 16319 235 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 1 227 56 277 285 95 32 1e-17 PGGLMSVIIDTFIAPPCHDDIEILWQDEHLLLINKPSGLLSLSGKNPQNLDSVHYRLVQT FPGCTLVHRLDFGTSGLMVIARNKAINAALCHQFSQRAVNKVYTALLCGHVEQDEGSVDA PIAKDPALFPLMTICAHTGKPARSRYRVMERIDQDTTGPLTRVALTPETGRTHQLRIHCQ QLGHPILGCDLYGGLKWPGAEDTPRLMLHASELHFIHPVSGETMNIRHAAPF >gi|333596725|gb|GL892087.1| GENE 21 16397 - 17002 916 201 aa, chain - ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 356 89.0 1e-98 MSKVLVLKSSILAGYSQSGQLSDYFVEQWREQHTADEITVRDLAANPIPVLDGELVGALR PSDAPLSPRQQEALALSDELIAELQAHDVIVINAPMYNFNIPTQLKNYFDLVARAGVTFR YTENGPEGLVKGKRAIVLTSRGGIHKDTPTDLVAPYMTLFLGFIGITDVNFVFAEGIAYG PEVATKAQTDAKAAIDSLVAA >gi|333596725|gb|GL892087.1| GENE 22 17237 - 21109 4919 1290 aa, chain + ## HITS:1 COG:STM1641 KEGG:ns NR:ns ## COG: STM1641 COG1643 # Protein_GI_number: 16764985 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Salmonella typhimurium LT2 # 1 1290 11 1300 1300 2439 93.0 0 MLMQKLDSLMLRDRQRFARRLHGVKKVKNPDAQQAIYQEMAKEIEQAAGKVVLREAARPA ITYPENLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRGVKGLIGHTQP RRLAARTVANRIADELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQ YDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKHFNNAPIIEVS GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGNESAGDILIFMSGEREIRDTADAL SKRDLRHTEILPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGIKYVIDPGTAR ISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILR TNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQATAYKLTPLG RQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHD KESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGI PVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMV AELVETSRLWGRIAARIDPEWVEPVAQHLLKRSYSEPHWERGQGAVMATEKVTVYGLPVV AARKVNYSQIDPALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILV DDETLFDFYDQRISHDVISARHFDSWWKKVSKETPDLLNFEKNMLIKEGAESVSKLDYPN FWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSL PKPVRRNFVPAPNYAEAFLGRVTPLELSLLDALEREFRRMTGTTIDREDWNWDQVPDHLK ITFRVVDDKNKKLLEGRSLTALKEALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE QKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQMMWRGLRRLLLLNIPSPIKYLHEKLP NKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWSEEGFAQLHEKVRAELNDTVV EIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLVYRGFVTGNGFKRLGDTL RYLQAIEKRLEKMAVDPHRDRAQMLKVENVQQAWQQWLNKLPPARRDDDDVREIRWMIEE LRVSFFAQQLGTPYPISDKRILQAMEQISA >gi|333596725|gb|GL892087.1| GENE 23 21204 - 21863 615 219 aa, chain - ## HITS:1 COG:mlr0279 KEGG:ns NR:ns ## COG: mlr0279 COG4122 # Protein_GI_number: 13470544 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mesorhizobium loti # 5 217 6 220 221 232 55.0 5e-61 MQSQWCSVDNYMISSLIPEDEVLSKILDNNKRAGLPEHDVAANQGQLLALFVRMTQARRI LEIGTLGAYSSIWMARALPPDGKLITLEADPTHAAVARQNIHLAKLSDRIELIEGPALKS LENFGDVPPFDLIFIDADKPNNPGYLEWALHYARPGTVIIGDNVVRDGEVINGQSEDARV QGVRKFIEMTGDNPRITATALQTVGIKGWDGFTLAMVNG >gi|333596725|gb|GL892087.1| GENE 24 21939 - 23318 497 459 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 43 456 38 456 460 196 28 4e-48 MTLRPIAALLMMATLAGCQSVDVEPAKSSLLIPAQWRAVSGPTSPTEQLWWRNFHDNNLN RYVDQALKNNSDVLLARERINEYQARVYAADGSLFPSLDAGVTGTRARSQSATTGLPVYG TLYKGSLTASYDVDIWGVNRSTSRAAEASLEAQKAAAAAADLTVASSVASGYVTLLSLDE QLRVTRSTLKSREEAFNLAKRQFETGYSSRLELMQSDSELRATRAQVPLLQHQIAQQENA LSLLLGSNPGEVARGESFDALTPLKLPSQLPSTLLNRRPDIVQAERQLIAADATLAASRA SLLPSINLTATGSVQDRTLSGLLDNPLQLWSVGGSILAPLLNRQALNAQVDISQSQRNQA LYSYEKTVRNAFAEVNDSLDAITRYQEQLTELLAQQEVAQETLRIAQNRYRNGYSSYLDV LDAQRTLFSVQTSVVQVKNNLLLAQIDLYKALGGGWISA >gi|333596725|gb|GL892087.1| GENE 25 23315 - 24397 1227 360 aa, chain - ## HITS:1 COG:BMEII0793 KEGG:ns NR:ns ## COG: BMEII0793 COG1566 # Protein_GI_number: 17989138 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Brucella melitensis # 37 355 1 319 325 295 53.0 9e-80 MSQQDAAKEQANTRKNVRVVSIFTAAAIGIVGVLVILYAWQLPPFTRHTQFTDNAYVRGQ TTFISPQVNGYITEVHVQDFVQVKKGDLLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQ QRKSAEAVIARNEAALKNARAQSLKTQADLKRVKDLTADGSLSIRERDAALASAAQGSAD IDQAKATLEMSRQDLQTVIVNRGSLEADVENAKAALELAQIDLQNTRIIAPRDGQLGQIA VRLGAYVTAGTHLTTLVPPQHWVIANIKETQLANLRVGQSVKFTVDALNDKAYQGRVESI SPATGVEFSAITPDNATGNFVKIAQRIPVRIEVLGEPEAYRLLRPGMSVQVTIDTREAKQ >gi|333596725|gb|GL892087.1| GENE 26 24419 - 26071 1927 550 aa, chain - ## HITS:1 COG:SMc00563 KEGG:ns NR:ns ## COG: SMc00563 COG0477 # Protein_GI_number: 15964886 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 32 512 7 493 531 320 40.0 5e-87 MRLPQRDPYAPREWQPHEKPALLGSPSTPEHPTSKRIAYGVVGLLVCLTGALGNAVVTAN LQNLQGTFGAWSTEIAWLPAVYVMTNVSINLLLVKFRQQYGLRAFTEGFLVLYVLVTFFH LFVNDLSSALMVRAAHGMVAAALSSLGIYYQIQAWPAKHRLKALTIGITGSSLAIPLARL FSTELLQLDEWRGLYFFELGLALISLACVMVLKLPPGDRRKVFEKKDFITFFLLAPGMAL LCAVLSLGRLDWWFEAPWIGWALSLSLVLIVSAIVFEHNRSNPLLNTRWLSSGSIVRLGL IMLLIRIVLAEQNTGVIGWLQYVGLQNEQMTHLAWSIFAGIVCGIVTSCLTIKPTKLAWP IITSLALMIVASLLDSQSNNLTRPAQLMVSQFLLGFGSAFFLAPAMLAAIGGVIADPRNL VSFSVMFGMSQNLGGLLGSAILGTFQTWREKYHSSLLADQLTTLNPLVNERIQLYTQMYK SLIGDSSLLGIQAITQLQTVTTLEANILAYNDTYLLTASIATATLVWILWRLLRLRITAR MALKNATGTK >gi|333596725|gb|GL892087.1| GENE 27 26285 - 27079 807 264 aa, chain + ## HITS:1 COG:ydcF KEGG:ns NR:ns ## COG: ydcF COG1434 # Protein_GI_number: 16129375 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 263 1 265 266 342 63.0 6e-94 MTMALFPCLPGTTLDAVNTIGAWLAQDDYQDNQPVDLVILAGNAVIPAIDAACKIAAEQG TPLIISGGIGHSTTFLYAAIAKHPRYNRIPTTGRAEAAILADIAREFWNIPVERLHVEDQ STNCGENARFSRALMKQSGLNASRVLVAQDPTMQRRTMATFARVCRDENDSPAWVSHPGL TPVLQNSDDGLVFRGPAEGLWPVERYLSLVLGELPRLRDDINGYGPAGRDFIAHVDIPAD VDAAWQILRNDVILTDALVSRSLL >gi|333596725|gb|GL892087.1| GENE 28 27278 - 28717 2012 479 aa, chain + ## HITS:1 COG:ECs2021 KEGG:ns NR:ns ## COG: ECs2021 COG1012 # Protein_GI_number: 15831275 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 479 1 479 479 879 91.0 0 MTVPVQHPMYIDGQFVAWQGDAWIDVINPATEEVISRIPDGTAEDARKAIDAAERAQAGW EALPAIERASWLRKISAGIRERVSEISALIVAEGGKIQQLAEVEVNFTADYIDYMAEWAR RYEGEIIQSDRPGESILVFKRALGVTTGILPWNFPFFLIARKLAPALITGNTIVIKPSEF TPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVGAGEKIMAA AAKNITKVGLELGGKAPAIVLDDADLELAVKAIVDSRVINTGQVCNCAERVYVQKGIYDR FVNRLGEAMKAVQFGNPAERTDIAMGPLINAAALERVEQKVARAVQEGAKVVLGGKAAEG KGYFYPPTLLLDVRQDMAIMHEETFGPVLPVVVFDTLEEALNMANDSDYGLTSSVYTQDL NIAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLNEYLQTQVVYLQA >gi|333596725|gb|GL892087.1| GENE 29 28763 - 29170 439 135 aa, chain - ## HITS:1 COG:no KEGG:ECL_02082 NR:ns ## KEGG: ECL_02082 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 135 86 220 220 167 69.0 9e-41 MDDRTDSNALLPVDINGNADISDSYYTYGVGKTAGGVKIGNYGLWMKDVTANGATVDAIL MNDNWGTDKWEKSVIPRSDAFSTSAFATTGTTEPLAITTAGFNFVSNLVIRDTATLAITD DTQLDGQATMTLVYL >gi|333596725|gb|GL892087.1| GENE 30 29907 - 30437 645 176 aa, chain + ## HITS:1 COG:STM1639 KEGG:ns NR:ns ## COG: STM1639 COG3038 # Protein_GI_number: 16764983 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Salmonella typhimurium LT2 # 1 175 1 175 176 268 79.0 3e-72 MRTKYTGLQISIHWLVFFLVIVAYCAMEFRGSFPRTDRPLINMIHVSCGISILVLMVARL LIRLKFPAPPIQPKPKAMITGLSHLGHLVIYLLFIALPLIGMVMMYNRGNDWFAFGLTMP HAAEGNFDLVDNLKAWHVTLANLGYFVIGLHAFAALMHHYFWKDNTLLRMMPKKRQ >gi|333596725|gb|GL892087.1| GENE 31 30480 - 31547 1270 355 aa, chain - ## HITS:1 COG:PA5149 KEGG:ns NR:ns ## COG: PA5149 COG0673 # Protein_GI_number: 15600342 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Pseudomonas aeruginosa # 7 351 11 356 360 364 55.0 1e-100 MNKVKTINIALIGYGFVGKTFHAPLIQSVDGLKLAVVSSRDEEKVKRDLPDVLVVATPEE AILHPDIDLVVIASPNATHAPLATMALNAGKHVVVDKPFTLDMQEARDLIALAQEKQRLL SVFHNRRWDSDFLGIKQVIEQGSIGKVKHFESHIDRFRPDVRVRWREQNVPGSGLWFDLG PHMIDQTLQLFGLPQSVQGNIATLRDGAEINDWAHVVLNYPEHKVVLHCSMLVAGGVSRF TVHGDKASVVKARIDQQETQLLAGVIPGSASWGEDSDAMVLFNAQGETSPIPAPKGDQRQ YYIHVRDALTGKIDNPVPPVEALAVMAVLEAAVKSSETGSTQTLDLTAQERAQLQ >gi|333596725|gb|GL892087.1| GENE 32 31561 - 32304 628 247 aa, chain - ## HITS:1 COG:ECs4266 KEGG:ns NR:ns ## COG: ECs4266 COG1349 # Protein_GI_number: 15833520 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 230 1 233 252 122 32.0 5e-28 MHKTARQKYVLDIITEQGQASITELADKLQVSADTIRRDLTDLEKQGLAQKNHGGAIALN LSTMTRASRNTLLPEIKQRLGKQVAQCVPAGSTLFLDAGSTLLAVASFLQGPLTLITPSL DIAQQVSDRDDIDLILLGGRWDQKQRLFAGSATLSLLSRYRADIAILGACAIHAELGLSA SQEADAEVKRAMLAASQTHWIVADHLKLNQCEPYLVSGLSQIHQLFLDRPWAELGDHSAL QVTVCAH >gi|333596725|gb|GL892087.1| GENE 33 33043 - 34374 865 443 aa, chain + ## HITS:1 COG:ECs0540 KEGG:ns NR:ns ## COG: ECs0540 COG1538 # Protein_GI_number: 15829794 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 32 442 40 450 451 441 59.0 1e-123 MKCNYRLLRLSASLTLISLTVSAANANNGLAGISPVAAMTMKESILFALDRDPSVSQQAA QLGIGQAQIDEARSGWMPQIALNGSTGHSQTTDSSGSLRNSAAWGLSLTQLVYDFGKTNN SISQSSAQRDSYRYQLMSTMSAVAEKTALSYVEVKRYSDLLQAAKENVQALKNVEQLAKL RADAGVSSTSDELQTRTRIAGMQATVEQYNASLNSARARLAVLTGIQAERYSPVPGGLAV EPGSLNRIDYSLIPTVMAAQNMERSAQYGVETAKSQHWPTLSLKGGRTRYESDNRAYWDD QIQLNIDAPLYQGGAVSARVRQAEGTRAMASSQVDQARFDVLQKASVAQADWTGAQGRME AGKRQLENALRARDVYKNEYTLSKRSINDLLSVEQDVWSATSAKIMAEYDGWSAAINYAS AVDNLMPLIGIEKNAAAKLPDLS >gi|333596725|gb|GL892087.1| GENE 34 34495 - 41904 7891 2469 aa, chain + ## HITS:1 COG:no KEGG:EFER_0542 NR:ns ## KEGG: EFER_0542 # Name: siiEA # Def: adhesin for cattle intestine colonization # Organism: E.fergusonii # Pathway: not_defined # 6 2454 4 2454 7222 2073 62.0 0 MSNAKVVDVIIRKTAEKTKLTGEGNLSVSISSPSVIEIQGSAQDVVRYVRQGNDLLIYMK DGSVIRCNNYFVEDAETHNHSELVFNDNQALTHISFADAGEASGVAATELTAQAAPISSI EPFLEQGSVLSDAPWGWIAGAALGGGAIGALLAHGGDGETKTRVIDNTKEVESATPTFLL TDNAGDKQGVLSAKAVTDDNTPTFSGTGQPGATIQVKDGSGSTIASTMVAKDGTWTVTLP TQADGEHTWSVVQIDGSKTTSAGSITVTVSTADASVTLATTAGDNVINASEQSAGFTLSG TSKNLAQGTALTVTLNGKTYTAEVGANGAWSVKVPAADAQALGDGTWTVNVSGKDTAGNI VSGSQTIGVDTAAPAISVDTIAQDNIINAAEHGQPLTLTGKTDAEAGQIVTVTLNGKNHT ATVGSDGTWSVTLPASEVQALANGEHTLTVNVSDKAGNGSSATAVFTVDTAAPVVTINTV AGDDILNTSEQGQAQIISGQANGAAAGDVVTVTVGGKTFTGVVQADGSWSVGVPASVTGA LGEGSHSISVSVTDAAGNTGSATHGITLSGNPPEFTLDPISQDNVLNAQEAMQPLSLSGT SNLPNGSAVTVTLNNVNYQTTVENGSWSVQVPVSDVLDLANTLYTVSVSGTDSVGNSGSA EANLLVDTALPQVIVNTFAGDNLVNNAEAAVDQTLSGRVTGAAAGDTVSVTVGGKSYTAT VGGDLKWSVTIPSADLQAFGDGDLTFSASVTNAHGNTGTGERDININAELPGLRVNTISG DDVINAIEQQQDLAVTDASTHLAEGTRITVTINNVEYVTTVNASGKWQIGVPAADLQAWT AGGMTVSVSAEDAWGNTVAAEHPIELDLNAVAVTIDTVTTDDMLNAAEKGADVTLSGQTQ GVEAGQTVVVKFADQTFTAQVQQDGSWHLTVPASAMETLIDGRAQVNVSVTNGNGNSADA SRVVIVDTQPPAITLDNLTDDNIINAAEAQQDLVLSGSTTVETGQTVTVTLNGKSYQTTV QADGRWLLNVPAADVGALTDGNVTVTATVSDVAGNSSSADRVGLVDATVPQVIINDFVTD TNTVNQLAHAQAQILSGSVTGAAAGDLVIITINNVDYTTVVDAAGNWSLGLPASVVQGLT DGTWTINVSVTDRSGNTGSSSVDVVVNTVTPVIGINTLAADDVINAAEKGEDLLLSGTSN QPEGTTITVALNGINYTATTDASGNWSVTVPASAVSALGEANYTVTASVTDNVGNSAAVM HDVLVDSSLPVVTFNNFAGDNIVNAAEVAAGQTLTGKVSNAASGDTVTIILGGQTYTATV QDDLTWSLPLTQSQLTALGNGDLTVSASVTNAHGNTGSSSLDVTIDAQLPGLRIDTVAGD DVINVIEHAQNLVISGTSTDLAAGSTVTVTINGKSYSASVLADGTWQAAVPAADVSRWAD GSLTISASAQDTSGNPVNIGTVVDVDLAPVAISINSVTDDNVLNAAEKGQDLVLSGSSSN VEAGQTVTIIFAGKTWTTTVDASGDWTCTVPAADLGGLKDGDASVQVSVTNVSGNAASSS QAFSIDTAAPAVTINTISGDNMLNAAEVAQDLTLSGTSTAEAGQTVTVTFNGNQYTAQVQ ANGSWTLDVPAADLAGIADGSAAVTATVSDKAGNPASTGASVLVDTTVPQITFNIVAGDD IVNIAEHGQALIVSGKVTGAQAGDVITLTLNGKDYTAMLDGAGNWSVGVPAQDVGALANG DQTISATLTDKAGNSTSATHAIDVSLTAPVIAINTLAVDDVINATEKGQDLLISGTSNQP DGTHITVTLNGISYAATTDASGNWSVTVRAANLSALGEASYSVTASVTDTAGNSANTSHS VLVDSALPQVTINAVATDDVINAAEVASGQTLSGKVSGAASSDTVTIGIGGNTYTATVQD DLSWSVNVASDVLTAIGNGDLTVTASVTNGHGNTGTGERDITIDASLPGLRVDTVAGDDV INSIEHGQNLIITGSSDGLASGSALTVTVNGKTYAATVLADGTWTAAIPAADVGALSAGT ITVTVEGQSAAGNPVSISHDVKVELAAVAISINPIASDDVINAAEKGADLVLSGSTTNVE ENQTVTITFGGKSYTATVDASGNWTATVPSADLGGLKDGDASVQVSVTNVNGNSASAGRE YSVDATAPTVSIEIVSDDNIINAAEAQQDLVINGVTNAEAGQTVTVTLNGKDYTTTVQSG GGWNVTVPSADISGITDGNYTITAAVSDKAGNPASADRDVLVDTTVPQLTINTVSDDDVI NSAEHAQALIVTGSVTGAAAGDVVTVTINNKDYSATLNASGKWSVGVPAADVSALTAGDH TITAALTDKAGNSNSTTHEVEVTLTAPVLNIDTVSGDDVINSSEKTQDLAITGTASGLAA GAVVTVMLNGKAYSATVDTHGQWTTTVPASEVGQLGEALYTVSASATDSVGLRNRQRRQQ HQHLAHRER >gi|333596725|gb|GL892087.1| GENE 35 41753 - 52522 11982 3589 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0527 NR:ns ## KEGG: ECUMN_0527 # Name: siiEA # Def: adhesin for cattle intestine colonization # Organism: E.coli_UMN026 # Pathway: not_defined # 39 3588 3352 6924 6925 2947 61.0 0 MANGPQPFRRARWGNWVKRFTPCRPPQQTASASATDSVGNSTSTSHTVNVESVLPGVIIN TVAGDDVINAAELATGQTISGTVVNAEAGNTVTVSVGGHSYTATVQDNLTWSVDVPGTVL TALGNGDLTVTASVTNGVGNSGSGERDITIDANLPGLRVDTVAGDDVINSIEHGQNLIIT GSSDGLTAGTALTVTVNGKTYPATVLADGTWRAAIPSADVSALAAGTVTVNVEGQSSAGN PVTINHDVKVDLANVAISIDAIATDDVINAAEKGADLVFSGTTANVEENQTVTITFGGKN YTATVDAEGKWAATVPSADLTGLKDGDASVQVSVTNVNGNSASAGREYSVDATSPSVTIN TIATDDILNASEAQSDLAISGTSTAEAGQTVTVSLNGKDYTTTVSANGSWTLNVPAADLA GLTDGSVTVTASVSDKAGNPASVDHNLTVDVTVPTVTIHTVAGDDVINVAEHNQAQIISG SATGAAAGDTVTVTIGGQTYTTVLDAAGNWSVGVPASVISGLSDGTVTITASVTDAAGNT GSGTHNVTVDTGLPSVSFNAISGDNVLNAVEKGQDLSVSGTSANLAEGTVVTVTLNGKNY TATTAADGTWSLTVPAADLAGLGQASYTLNATATNGVGNSVSSSANLLVDTALPGVTINT VAGDNVINAAEVAAGQTLSGTVTNAEAGNTVTVTIGGHSYTATVQNNLSWSVNVPSDVLT ALGNGSLSVTATVTNGHGNTGTGEREIAIDANLPGLRVDTVAGDDVVNTIEHAQNLIVSG SSDGLAPGTALTVTVNGKDYAATVLADGTWRAAIPSTDVSAWPEGTVKISVTGDSAAGNP ITISHDVTVDLATVAISINALATDDVINAAEKGADLVLSGATTNVEAGQTVTISLNGRIY TTTVDDSGNWTYTVPSADLAGLKDGDASVQVSVTNVNGNSASAGREYSVDATAPSVTINT IATDDILNASEAQSDLAISGTSTAEAGQTVTVSLNGKDYTTTVSANGSWTLNVPAADLAG LTDGSVTVTASVSDKAGNPASVDHTLMVDVTVPAVTIHTVAGDDVINVAEHNQAQIISGS ATGAAAGDKVTVTIGGQTYTTVLDAAGNWSVGVPANVISGLSDGSVIVTASVTDAAGNTG SGTHNVIVDTGLPSVSFNAISGDNVLNAVEKGQDLTVSGTSANLAEGTVVTVILNGKNYK ATTGSDGTWSLTVSAADLSGLGEASYTLNATATNGVGNSVSSSANLLVDTALPTVTINTV AGDNVINAAEVAAGQSITGKVANADIGNTVTVNIGGNIYTATVQSDLSWSVNVPDSVLTA LGNGDLTVSATVTNDHGNTGTGERDITIDASLPGLRVDTVAGDDVINSIEHGQNLIVTGS SDGLAAGTTLTVTVNGKTYAASVLADGSWSAAIPAADVGALAAGSVTVTVAGQSAAGNPV TISHDVTVDLAAVAISIDAIATDDVINAAEKGADLVLSGSTSNVEENQTVTISFGGKSYT AKVDADGNWTATVPSSDLAGLKDGDASVEVSVTNVNGNSASAGREYSVDATAPTVTIETV AGDNVINGSEAAAGVAISGTTTAEVGQTVTVTLGGKSYTAQVQQGGLWSVNVPGTDLSAL ADNGYTVQVSVSDAAGNPGSAGKAITLDTTPPTVSFNVVAGDDVINSVEHGQAQIVSGTA TGASVGDKLIVTIGSNQYTTTVDASGKWSVGVPASDISALTDGTVTLSATITDSAGNSST QTHDVVVNTASVALTVNTLSGDDVINAAEAGASLVINGSSAQFANGTQVTVTLNGKSYTA TIQSDGAWQTTVPAADVGALADGARYQVTVSAQDSAGNSASATHTLSVDTTAPVISVNTL SGDDVLNAAEAQQPLTVHGSSSAEAGQTVTVTLGGKTYTALVANNGTWTLDVPAVDLAAL SQGALTLTASVNDKAGNSGQTTHTLTVDTVAPAVTISTVADDDIVNNTEQLAGQTISGTT TAEQGQTVTVSFNGHSYQATVAANGSWSVFVPGRDFLGLTDGNYTLTATVSDKAGNPGST THNVTLNGDVPNIAINTFAQDDIVNAAEHGTPLVISGTTDAPTGQTVTITLNGKTYTAIV QADGRWSYTVGSADVTALADGGSYVINAQVSNAIGNSASDNHTVTVDLTAPSMGISIDSL QNDTGLSANDFITNHSQVVVNGSLTAQLGNNEKAQISLDGGTTWIDLTVTGTTWRYTDGR TLTDGTYPYQVRVIDIAGNVGATDSQDVVIDLTKPAAAAITVDSVSQDTGLSDSDFITSD NQISLKGTLGAALGSGDHAQISLDGGATWTDVSVSGLSWTYVDGRTLADGDYNYQLRVID DAGNISATTSQVVTIDTVAPDASKTIAIDSISDDTGLSSSDFITNDTSLTLHGSLGATLA DGEYAQISIDGGITWQNVIVTGNSWYYVDGRTLGNQAYDYYVRVVDAAGNVGASAHQQVT VDTVAPDAAITVTVDNITVDTGFDNNDFLTSSTSYTLNGTLGAELGAGEYVQVSMDGGTT WGYATVSGTRWSYNDTRTLADGDYRYQVRVVDQAGNVGATTTQDVTVDTQAPQYGITIDS ISEDTGQSGSDFITMDTSLTINGSLGSTLASDERVQISLDGGNTWIDTTVTNQRWSYTDT RDLADGDYTYQVRIIDQAGNVGSTSSQVVTVDTTPPATVGTVVSYTDGEGERTGTYGASV ATDDTSPLINGTLNRAPEDGEIVQLYRDGILLGQVTMNGSASWSYQDNGLLDGNHTYILR VTDKAGNYTESDGFVLNVDTSIPTTTAAITAQTTSDTTPIVSGTVSADLVNGEYLVVTVN GKTYTSQTGGAVVVDPDHNTWYLQIPDSDALSVASYDVTAQVKSSAGNGNTTGTATGSLV IDTTSVNTDWATTAGNLNNSTMTVGTNSSGLWNIIANGQSYSSSDSSTYAGNTLSNTRGY YVVSQTAADVDRNGTQDIFATENTYAGSTQVMWTYDGSSYTASQLAMGTTIWYGGVIAYD KTGDGYLDLAYGDAGMDSLTYLVNNNGVLSPDGTGGEGGFYGQFDSGREISGIDLNNDGT VDIVQHTNRSGAYSLTVINNNGNGTLSIGQNLTNVFVVNTANSTTAASMTWADFNGDGYM DLYLGSSYNNNGGVIYYNDGTGKLSTTKSAVEASNAAAGYLSVAVDWNGDGQMDIIKLST YGGSQTATLFTNNGYGSAWTASQLASGIAYATGVAAVDYNWDGAKDLLVSQQNGKVVLVQ NSAKIADGTAMHLHIVDSEGINAYYGNTVNLYNAAGVLVASQIINAQSGIGSNDTSALVS FYGLDPNESYSAEIVKITNGVSDNVTWTGLDAGNGKEGYVLTAEAATGGHSGTITGTGYN DTFIAEDGAYTYNGSGGWNTHSDYDTWSNTGGMDVVDYRNATSGITVDLRLSTAQDTGFG TTRLLNIEGINGSDYDDVITGNSGDNQFEGRGGNDTFNIGSGGQDTLLYKLINASDATGG NGSDVVNGFTVGTWEGTADTDRIDLRDLLSDSGYTGTGSASYVNGVATLDSSAGNIADYI RVVQNGSNTEIQVDLDGTGGQFSPTTLVTLNGVQTDLATLLANHQLLIA >gi|333596725|gb|GL892087.1| GENE 36 52594 - 54759 197 721 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 490 695 16 225 245 80 27 3e-13 MKTHPQYEPWLQGMLIIAKYYRLDFSAQHVRVTINHESQSPRQLVLEEMARQLGMGMRWV AAEAVSLDPWRLPLLAEFTGGQIAVINRMDNDGNVSVQFSGDGGLETTLTRDELGSRLKG LMVLRPLESTPDARVDDYSKPYEKNWFWQLALKDWRRYSDIMLVALVANVLALSGMVFSM QVYDRVVPSQSEATLWVLFGGVMIAIVFEFIMRMLRVHISDVVGKRADLRISERVFAHAL RIKNGARSKSTGSFIAQIRELESVRELITSTTIAAISDLPFFLLFVFILWMIGGPLVLVV LLAVPLLLIPGLLVQRPLGKLSSEGMRESAIRNATLVEAVQGIEDIKLMRAEQRFQNQWN NTNDVAASVGMKQRWLTGLLLTWTQEVQSIVYAVVLLVGCYLVISGDMTTGALVGTSILA SRTIAPLSQISGVLSRWQSAKVARKGLDDLMQRPIDDPRHGKKVHKAHLRGDYRLDDVGF YYDEEEKLTVLNISKLRIRAGERVAVLGRNGSGKSTLLHLLAGMQEPQQGSILLDDIALN HLDPADVRRDMQLLSQQARLFFGSVRDNILMGNPLATDEEIHQALVNSGALEFVRKQKMG LNTIINEGGTGLSGGQRQALLLARALLTSPNILLLDEPTAWLDEVSEKQFIQHLHPWLGK RRTLVVATHRLPILDLVDRIIVLENGNVVMDGPRDAILRQHGMAPQQAPQRTVKLKTEGV A >gi|333596725|gb|GL892087.1| GENE 37 54756 - 55931 1132 391 aa, chain + ## HITS:1 COG:ECs0544 KEGG:ns NR:ns ## COG: ECs0544 COG0845 # Protein_GI_number: 15829798 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 527 69.0 1e-149 MNDFSRFNSRLKEPRLPRSSLVAWSLFALLVVFITWASLFQLDEVTTGSGKVIPSSHEQV IQSLEGGIIHSLMVREGDIVERGQQLAQLDRTKTESSVLESESRLNAAMATAARLNAEVN NTVLTFPAELDDDVELVKQETALYQSRRESLEKGLAGLRQGADLVQRELSLTRPLVTQGA ASKVEVLRLERQKNELESKITEMKNQYYVRAREELAKANAEMEAQRSVMKGREDSLTRLT FNAPVRGIVKDIDVTTVGGVIPPNGKLMSLVPLDDQMVIEAKISPRDVAFIHPGQKALVK ITAYDYSIYGGLEGEVTMISPDTLQDEVKRDVYYYRVYIRTDSNHLTNRQGKEFPVFPGM IATVDIKTGSKSVIDYLLKPLNKAKEALRER >gi|333596725|gb|GL892087.1| GENE 38 55965 - 56672 338 235 aa, chain - ## HITS:1 COG:no KEGG:ECL_02072 NR:ns ## KEGG: ECL_02072 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 233 60 292 294 422 87.0 1e-117 MCCFVFGNQAESVSEIKALCTRYNIASPNSVIAIITILKTTGRIKTWRCTEDRRKTKIAP TEKGLDELKRYMSGAFTPVSILYPAFNINVNLLDNDIQRHNFFRRAAEYLFRGLTFRKVL PEVGLFIDKDGGRMIMLYLYLQAIKNKTAHGAIITYSASTLAKEFFVSRIHVNRIIKSAQ EAGYLKDRGDGRMSIYPAFIELVENYAGLYFAYVTHYINVVPKERRHAVNMTSTL >gi|333596725|gb|GL892087.1| GENE 39 57676 - 58593 319 305 aa, chain + ## HITS:1 COG:RSp0380_3 KEGG:ns NR:ns ## COG: RSp0380_3 COG2200 # Protein_GI_number: 17548601 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Ralstonia solanacearum # 59 302 6 253 269 87 27.0 2e-17 MSIKEQSARLGLSDKTIYTHRKVGLGKLYLIRVWFSDARVFRDEVCAVKNNPQGFSDAEI DILQALHKREIFAAYQIITDGDKKGVGFEILLRWHKNGQVLKAAQFLNGVKNGEIWLKLT ALVIHAAVSGINRYNGIYYFSVNIPPPLATGNALPGMVKKAVEMLLKPQWAGKLVFELAE TIDVTKDPNIPVTLQRLRAEGCRLFLDDCFSRDHAMLPIRQINVDGLKLDRDIVEHFVAN DNDYSIIKAIQIYSDMTGRECVAEGVDSKEKFENLVALGVKRFQGYYLSRAVKEEELDRM VRLFS >gi|333596725|gb|GL892087.1| GENE 40 58679 - 58957 400 92 aa, chain - ## HITS:1 COG:no KEGG:JW1153 NR:ns ## KEGG: JW1153 # Name: ymgB # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 5 92 1 88 88 74 47.0 2e-12 MSKAIMQQTYNFEALHDKGLAEHFLNAGKHLTGEVEVLGSAIRCIMLAGDNLSNKEIILQ LIHALEITEEPEACDVIRNTLEIVVGFTRDDI >gi|333596725|gb|GL892087.1| GENE 41 58981 - 59280 173 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261339762|ref|ZP_05967620.1| ## NR: gi|261339762|ref|ZP_05967620.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] # 1 99 1 99 99 159 87.0 5e-38 MHRTKFERLKDDLIGEAVLSILKENGPITFASLANRLRAMANVESNDERKNALIAAEDEV RQRVTGVSQDRGSVMGDYDIGRMRALFTKKTVLAPDKKH >gi|333596725|gb|GL892087.1| GENE 42 59399 - 59638 165 79 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1225 NR:ns ## KEGG: ECS88_1225 # Name: ycgZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 82 53.0 5e-15 MRRNHAPSTAESAITLYFNKDNVPTQQETLGAIVSEIIKENVQLSRMTICTKLLRRIEES TSDAEKAHYNGLIALFFER >gi|333596725|gb|GL892087.1| GENE 43 59827 - 60099 305 90 aa, chain - ## HITS:1 COG:no KEGG:ECL_02069 NR:ns ## KEGG: ECL_02069 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 90 1 90 90 144 96.0 1e-33 MSDFDTDKNAQYAGDKAKNKLDELSGSAQQQFGEFVDSPKHQVKGAAKKYAAQASDAVSD VTEAVRNNPLTGLIAAGAVGIVLGLLLGRK >gi|333596725|gb|GL892087.1| GENE 44 60268 - 60891 397 207 aa, chain - ## HITS:1 COG:no KEGG:KP1_4241 NR:ns ## KEGG: KP1_4241 # Name: not_defined # Def: putative transport protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 203 4 206 209 233 64.0 4e-60 MIVLKSFLFFVGAAAACALIILCLWVDMRFVGHDIPELSLTEIMQETVLATIVFLHFRLA KIDESMRYCNILVGGFFLTMLIRELDALFDLISHGSWVWFALITALLALIRPVMHFRATL EQLAKYTQSPWYGILLSGLLAVLVFSRLFGMQVLWHAILEHGYIRVVKNAVEEGSESFGY MLCLAASLGYYVTFPAHARQKYSLRAA >gi|333596725|gb|GL892087.1| GENE 45 61232 - 61480 162 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRRKFLILWHIYAFIYLCIFIAFFAVVPEVTLFDYLSIKYGFIDIERWDIYYSIFAIST TVIINFLFILLTFRFISKTKKG >gi|333596725|gb|GL892087.1| GENE 46 61480 - 61791 71 103 aa, chain - ## HITS:1 COG:no KEGG:Rahaq_4636 NR:ns ## KEGG: Rahaq_4636 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 2 103 58 158 158 124 58.0 1e-27 MRPGSGAAHFAKSLTYSVLSGSNHFHWFALYREDSDIDDYTFISEVERGNFRLHPAGYKG ISNGCITFLNTSHFNIMRAALLRQPTFKIGGTQVDALGTVQVY >gi|333596725|gb|GL892087.1| GENE 47 61959 - 62441 370 160 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 160 1 160 163 249 73.0 2e-66 MAIPAYLWLKDDGGADIKGSVDVQHREGSIEVLGFGHGLHLPTDNMTGKITGTRVHSALV FEKEFDSSSPYLYKAVATGQTLKSAEFKWYNINDAGQEVEYFNMLLENVKVVSICPMMHD VKNPATEKHNHLESIALRYEKITWKHCDGNIIFSDEWKDR >gi|333596725|gb|GL892087.1| GENE 48 62663 - 62905 297 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADFCHPHSPLSRGRLPRHQLIFEVNFNHFPHQAIGSAAHGGNLLQNGETGIARLQGAFK GINLAPNAADAGQNTFFIFG >gi|333596725|gb|GL892087.1| GENE 49 62962 - 64080 1443 372 aa, chain + ## HITS:1 COG:STM1627 KEGG:ns NR:ns ## COG: STM1627 COG1062 # Protein_GI_number: 16764971 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Salmonella typhimurium LT2 # 1 372 1 372 372 696 96.0 0 MKSRAAVAFGPGQPLKIVEIDVAPPKKGEVLIKITHTGVCHTDAFTLSGDDPEGVFPAVL GHEGGGVVVEVGEGVTSLKPGDHVIPLYTAECGECKFCKSGKTNLCQAVRATQGKGLMPD GTTRFSYNGEPIYHYMGTSTFSEYTVCAEISLAKVNPQAPLDKVCLLGCGVTTGIGAVHN TAKVKEGDTVAVFGLGGIGLAVIQGAVQAKAGRIIAVDTNPEKFKLAGEMGATDFINPKD YDKPVQDVIVELTDGGVDFSFECIGNVNVMRSALECCHKGWGESIIIGVAGAGQEIKTRP FQLVTGRVWRGSAFGGVKGRTQLPGMVEDAMVGKIQLDPFITHRLPLDQINEAFDLMHEG KSIRTVIHFGDN >gi|333596725|gb|GL892087.1| GENE 50 64240 - 65931 1860 563 aa, chain + ## HITS:1 COG:STM1626 KEGG:ns NR:ns ## COG: STM1626 COG0840 # Protein_GI_number: 16764970 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 530 1 530 541 729 84.0 0 MDNTTSMQAQHKLSFLHHIRLVPLFSSILGGIILLFALSSGLAGYFLLQADIDQQDVTAE IQVRTGLSNSSNHLRTARINMIHAGAASRIAEMEAMKQNIAEAETRLKQSQDGFASYMKR TVRTPADEALDGDLKARYDAYIAGMQPMLKYAKNGMFEAIINHENETARPLDDAYNAVLL KAIKIRTERANALTAQAHTRTRLGLMFMFGAFGLALALAVITFVVLRRTVINPLQRAATR IENIAKGDLTMPDEPTGRSEIGRLTRDLQTMQHALVTTVGTVRQGAEEIYRGTSEISAGN TDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVV KTMGNISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAS RSANAAKEIESLINESVSLIDQGSGEVVAAGNTMNEIVEAVKRVTDIMLEIAAASDEQSR GIVQVSQAISEMDKVTQQNASLVEEASAAAASLEEQGARLTEAVGAFRLNGARTGRAATA APAAKPAPLTPATAVSGDNWETF >gi|333596725|gb|GL892087.1| GENE 51 65973 - 66896 827 307 aa, chain - ## HITS:1 COG:STM1625 KEGG:ns NR:ns ## COG: STM1625 COG0583 # Protein_GI_number: 16764969 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 307 1 307 307 504 87.0 1e-143 MEKNGLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGTRLFDR GRLGAQLTLVGEQFLTHAVKVLDALNTAGQALNRKEEPASDIVRVGALPTAALGILPAAI GQFHRQQKHATLQVATMNNTMLLAGLKSGELDLGIGRMSDPELMSGLNYELLFLESLKLV VRPNHPLLQDTVTLSRVMEWPVVVSPKGTVPRQNAEALLQMQGCTLPSGCIETLSASLSR QLTVDYDYVWFVPSGAVKDDLRRGVLTALPVTSPGAGEPIGILTRVDASLSEGAQTLLSA IRKSMPL >gi|333596725|gb|GL892087.1| GENE 52 67124 - 68467 1553 447 aa, chain + ## HITS:1 COG:STM1624 KEGG:ns NR:ns ## COG: STM1624 COG5383 # Protein_GI_number: 16764968 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 447 1 447 447 763 85.0 0 MANTITADDIREHFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPLLHEQLANADEL ARLNVERHGAIRVGTAQELSTLRRIFAIMGMYPVSYYDLSQAGVPVHSTAFRPTDDAALC RNPFRIFTSLLRLELIENVALRERAAEILSRRNIFTPRCLELIDLHDAQGHFTGAQAREF VQEALETFRWHRHATVDQETYLALSNEHRLIADVVCFPGCHINHLTPRTLDIDRVQELMP KYGIEPKILIEGPPRREVPILLRQTSFKALEEPVLFAGEHKGTHTARFGEIEQRGVALTP KGRELYDSLLNQAGTGKDNLTHQLHLREIFSAFPDSEMFLRRQGLAYFRYRLTPTGEAHR HAFRPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQARSHGNASRQAFEA ALGCAVHDEFSLYEEAEVRSKQRCGLL >gi|333596725|gb|GL892087.1| GENE 53 68510 - 70015 1316 501 aa, chain + ## HITS:1 COG:STM1623 KEGG:ns NR:ns ## COG: STM1623 COG2272 # Protein_GI_number: 16764967 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Salmonella typhimurium LT2 # 1 501 1 502 502 785 74.0 0 MENPSAPVVETRQGALIGFTEDNTHVWCGIPYAAPPVGPWRWRSPRPPERWDGVRPATAF SASSWQSSESCQELGGGDPGQFSEDCLYLNVWSPIARATPLPVMVWLHGGGFTLGAGGLP PYNGRALAKRGAVVVTINYRLGHLGFFAHPALEGEEERVVHNFALLDQIQALEWVRDNIA AFGGDPENITVFGESAGARSVLSLMASPLAGGLFHKAIVQSGYTLPDTPREQAMHKGEAI AAHFGLENATAEQLRAIPPEAFWPLTSPLNIAPAPIVGDCVLPEAMLDVFFAARQHPVPV MIGSNSDEASVMSVFGVDLAGQIQKLRRERRFGLGLIKLLYPGVKGDEELGRQVCRDMAF TTMGYVVMQAQQRAGGLCWRYWFDYVAEAEHATYINGAWHGNEVPYVFDTLGLVEPSRQY VNERDLVFAAQVADYWVSFARDAGARDSLAGPTRWPACRKGRDVLLRIGVNKHAGFRLEN RFMRARMSLFKRVMKHHVSLD >gi|333596725|gb|GL892087.1| GENE 54 70002 - 70844 836 280 aa, chain - ## HITS:1 COG:PA5293 KEGG:ns NR:ns ## COG: PA5293 COG0583 # Protein_GI_number: 15600486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 278 1 291 305 160 37.0 2e-39 MSRRSFPLNAVETFIVTARHLNLTHAARELCLTQGAVSRKIASLESWFGFPLFERHARGL RLSSQGSALLPELQSAFEHLLNVAEQARSHQTVIRLKAPTCAMRWLVPRLLQVEREQPEL QIALTTTTDHNVNFKTESYDAAIVFGTHMSAGDLLFEEALTPVMSPLRAGSALETLTFLH PTRDKTDWTLWLAKQPHPTPAMLKNQHFETMDLAITAAIQGLGIAIADETLVEEDVRAGR LMRPFDTSIKTGASYRLVLRDAPGPENGLDAFRACLLSRG >gi|333596725|gb|GL892087.1| GENE 55 70958 - 72127 1046 389 aa, chain + ## HITS:1 COG:RSc2011 KEGG:ns NR:ns ## COG: RSc2011 COG0436 # Protein_GI_number: 17546730 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Ralstonia solanacearum # 11 386 24 399 399 392 51.0 1e-109 MTLKTPVQTRSKLPDVGTTIFTVIGQLSARHNAINLSQGAPNFSCDPKLITGVTRAMEAG HNQYASMTGLQPLRERIADKIATLYGTHYDPSNEVLVTASASEGLYSAISGLVHPGDEVI YFEPSFDSYAPIVRLQGATPVAIKLTVPDFAVNWDEVRAAITPRTRMIIVNTPHNPSGQV FSAADLHQLAALTRHTDIIILSDEVYEHVVFDGEPHHGMATHPQLAERSVIISSFGKTYH VTGWRVGYCVAPAELMDEICKVHQFLMFSADTPMQYAFAEHMTDPQTWLSLAAFYQRKRD LLQSLLADSPFRLLPSAGSFFLLADYSGFSDERDSEMVKRLIVEGGVATIPLSAFYADGT DNKLIRLSFAKDEATLRAGAQALCRVTPR >gi|333596725|gb|GL892087.1| GENE 56 72138 - 72911 941 257 aa, chain + ## HITS:1 COG:STM2355 KEGG:ns NR:ns ## COG: STM2355 COG0834 # Protein_GI_number: 16765682 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 5 249 7 253 260 217 45.0 2e-56 MKLRALVVGIGLLCSFSSFAATELRYGLEAEYPPFESRNASGELEGFDVELGNAICQAAA LKCSWVETSFDALIPGLVAKKFDAINSAMNITEQRRKSIDFTQPIYRIPSQLVGKAGSAV EATPEGLKGKTIGVLQGSIQETYAKEHWEKHGVTVVSYKDQNMAWGDLLNGRIDASLVMS AAGQAGFLSKPQGKGFGFIGKPVSDDTILGSGIGFGLRKGDEATKKQLDAAIDKVRADGT IAKLADKYFPGIDVSVK >gi|333596725|gb|GL892087.1| GENE 57 73142 - 74797 2081 551 aa, chain + ## HITS:1 COG:ECs2029 KEGG:ns NR:ns ## COG: ECs2029 COG3131 # Protein_GI_number: 15831283 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 550 1 550 551 1027 86.0 0 MNRRRFLKGSLAMAALSGTSGLASLFSQAAYAADSDIADGQSRRFDFSVLQSMAHDLAKT PWGGAPRPLPETLATMTPQAYNAIRYDEKQSLWNNIEGRQLDAQFFHMGMGFRRRVRMFS LDQTTSQAREIHFRPELFSYGDTGVDTRQLEGQSDLGFAGFRVFKAPELARRDIVSFLGA SYFRAVDDTYQYGLSARGLAVDTFTDTPEEFPDFTSFWFETVKPGDTTFTVYALLDSPSI TGAYKFVIHCEKSQVIMDVENHLYARKDIKQLGISPMTSMFSCGNNERRMCDTIHPQIHD SDRLAMWRGNGEWICRPLNNPQKLQFNAYQDKNPKGFGLLQLDRDFSHYQDVMGWYNKRP SLWVEPRNNWGKGAIALMEIPTTGETLDNVVCFWQPEKPVQAGDELDFKYRLYWSAQPPV RSPLANVYATRTGMGGFPEGWAPGENYPKVWARRFAIDFVGGDLKAAAPKGIEPVITLSS GEAKQVEILYVEPFDGYRILFDWYPTSDSTEPVDMRLFLRCQGDAISETWLYQYFPPAPD KRNYVDDRIMR >gi|333596725|gb|GL892087.1| GENE 58 74855 - 75394 597 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|218548861|ref|YP_002382652.1| ribosomal-protein-L7/L12-serine acetyltransferase [Escherichia fergusonii ATCC 35469] # 1 176 1 176 182 234 61 1e-59 MTSEIIPINQEIELRAVDERYTFDLHNLVIKNKTWLQTAFDWAQHVGSEEDTRRNVQSNQ MLHQRGYAKMFLIFMKDELVGVLSFNAIEPANKAGYIGYWLDEAHQGQGILSQALQAFMR YYVERGEIRRFVIKCRVDNQSSNRVAQRNGFTLEGCMREAEMLNGRFDDVNLYARIFPL >gi|333596725|gb|GL892087.1| GENE 59 75389 - 76369 736 326 aa, chain - ## HITS:1 COG:no KEGG:ECL_02033 NR:ns ## KEGG: ECL_02033 # Name: not_defined # Def: putative nucleoside-diphosphate-sugar pyrophosphorylase # Organism: E.cloacae # Pathway: not_defined # 1 326 1 326 326 543 79.0 1e-153 MTKYRLSNETRLWRWQDGSTPCTTSLRQIIAVKDFNDVTRGTKGGWVEDENALAQDGDCW VYDENSVVFAGARICGNARLTQPCIVSHRAHVGGNSWLDAAEVSHGAIISDNVTIQHSSV RGECRIAGDARVLHNSMVIAAKGLTPDREQILQIYDRATVSQSRIVHQAQIYGDAMVTWA FVEHRAEVFDRAILEGNALNNVWVCDCAKVYGNARLLAGSEDDAIPTLRYSSQVAENALV EGNCVIKHHVLIGGEAWLRGGPILIDDKVVIQGRARISGDVLIEHQVEVTDDAVIEAFEG ESIHVRGSKVINGDTRITRTPLLGAL >gi|333596725|gb|GL892087.1| GENE 60 76491 - 77486 998 331 aa, chain + ## HITS:1 COG:STM1609 KEGG:ns NR:ns ## COG: STM1609 COG1275 # Protein_GI_number: 16764953 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Salmonella typhimurium LT2 # 2 331 4 333 337 484 83.0 1e-136 MHNQNQRVLNLPAGYFGMVLGTIGMGFAWRYAGTIWPVTRWPGEILVALAVAMWFLLSVA FLTRAVRFPHSVLSEMRHPVMSSFVSLFPATTLLVAIGFVPWYRPVALGLFGVGVVIQLA YAAWQSAGLWRGKHPEEATTPGLYLPTVANNFISAMACGALGFHDAGLVFLGAGVFSWLS LEPVILQRLRSAGELPAALRTSLGIQLAPALVACSAWFSVNGGEADTFAKMLFGYGLLQL LFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGQSSPSGFFHALAVPLFIFTNAII AMLLVRTFILLMQGKLLVRADKALLMQSEEK >gi|333596725|gb|GL892087.1| GENE 61 77486 - 78079 881 197 aa, chain + ## HITS:1 COG:STM1608 KEGG:ns NR:ns ## COG: STM1608 COG0500 # Protein_GI_number: 16764952 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 1 197 1 198 198 347 83.0 1e-95 MTVDENYFTEKYGLTRTHSEVLYSAGIVKPGKTLDLGCGNGRNSLYLAANGYDVTAWDKN PMSIDNIERIKAAEGIANLKTAIKDLNTLTFDGEYDFILSTVVLMFLEAKTIPGLIANMQ GCTKPGGYNLIVAAMDTEDYPCTVGFPFAFKTGELSHYYEGWELIKYNEEVGELHRTDAN GNRIKLRFATMLARKPA >gi|333596725|gb|GL892087.1| GENE 62 78076 - 79305 1407 409 aa, chain - ## HITS:1 COG:YPO1009 KEGG:ns NR:ns ## COG: YPO1009 COG2195 # Protein_GI_number: 16121311 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Yersinia pestis # 1 409 1 409 410 588 70.0 1e-168 MGSELSRQLTQRFFRYLAITSQSDPKVKTLPSTPGQHEMARELAKELETLGLDDIVIDEF ATVTAVKKGNVPGAPRIGFITHIDTVDVGLSPDIHPQILTFTGDDLCLNKEKEIWLRVKE HPEILAYPDEEIIFSDGTSVLGADNKSAVTVVMTVLENLTAEHKHGDIVVAFVPDEEIGL CGAKALDLKRFDVDFAWTIDCCELGEIVYENFNAAAAEIRFTGVTAHPMSAKGVLVNPLL MATDFISHFDRQQTPECTEGREGYIWFNGIQAGQNEAVLKANIRDFDKEGFAARKQQIAD VAARIAAQHPTAKVEYRIEDTYSNISNAIGEDRRAIDLMFEAMESLGITPRPTPMRGGTD GAALSAKGLLTPNFFTGAHNFHSKFEFLPLSSFEASYRTALQLCLLAAR >gi|333596725|gb|GL892087.1| GENE 63 79417 - 81012 1969 531 aa, chain + ## HITS:1 COG:STM3630 KEGG:ns NR:ns ## COG: STM3630 COG0747 # Protein_GI_number: 16766917 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 2 530 7 535 535 767 67.0 0 MKSTFTMITLALAALTVSSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLV DFKPGTTELVPSLAESWEVSEDGKIYTFHLRKGVKFHSNKLFTPTRDFNADDVIFSFMRQ KDVNHPYHNVSNGSYSNFESLEFGSLITAIDKVDDHTVRFTLAHPEAPFVADLAWYFASI LSAEYADAMLKAGTPEKVDMQPIGTGPFKLAQYQKDSRILFTAFPDYWQGKSKLDRLVFT ITPDASVRFAKVEKNECQVMPFPNPADLPRMKANKDINLMSKAGLNTGFLAFNTQKPPLD NVKVRQALAMAINKPAIIEAVFHGTGTAAKNLLPPGVWSADSALKDYDYDPEKAKALLTE AGFAYGVSIELWAMPVQRPYNPNAKRMAEMIQADWSKVGVQAKIVTYEWGEYLKRVKGGE HQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSAKWCYKPFDDLIAEAKSITDREKRVA LYKQAQQMMHDQMPAVMIAHSTIFEPVRKEVTGYEIDPFGKHLFWQVDLKE >gi|333596725|gb|GL892087.1| GENE 64 81147 - 81821 571 224 aa, chain + ## HITS:1 COG:no KEGG:ECL_02028 NR:ns ## KEGG: ECL_02028 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 224 1 224 224 407 91.0 1e-112 MRTHPFFKVAVLSGLLALAGCASKVAAPEQYSGFLKDYSSLQQTTSATGKPTLRWVDPSY NPANYDSIIWTPISYYPKPQPSTQIGQKTLDELLSYTNNKLKTAIGQRKPIVTTPGKHSL IFRGAITGVSSDKEGLQFYEVVPVALLVAGTQMATGHRTMDTHLFFEGELIDAATNKPVV KVVRKGEGKELANENTPMGFATLKQVVDDMATDATMFDVHPTAK >gi|333596725|gb|GL892087.1| GENE 65 81855 - 82751 867 298 aa, chain - ## HITS:1 COG:PA3897 KEGG:ns NR:ns ## COG: PA3897 COG0697 # Protein_GI_number: 15599092 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 1 289 1 289 300 211 49.0 2e-54 MNALLYGLVVVIWGTTWIAIFLQQGPVAAPVSIFWRFAVASATMMIVLVALRRLRRLALR DHLYCMLQGCCVFCFNFWCFYTAAAHINTGLESVIFSMAVLYNAINSFIFFGQRPPARFW TAAALGLIGIITLFWNDLLASGWSASLLTGIGLSALGTYGFSLGNMISMRHQRNGLETMT TNAWAMLYGTVVMGLIALFRGESFMPEWTVSYMGALLYLALFGSVIAFGAYFTLVGRIGP GKAAYSTLLFPLVALSISTVYEGYVWHLNGIVGLLLILGGNMVMFTKPETWFRRLRTA >gi|333596725|gb|GL892087.1| GENE 66 82926 - 83798 929 290 aa, chain + ## HITS:1 COG:PA3898 KEGG:ns NR:ns ## COG: PA3898 COG2207 # Protein_GI_number: 15599093 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 5 288 7 289 293 210 41.0 3e-54 MSLVYDTFETLRQQNAVLRETVALNTGIQLAAWYNKHDTITVKSNHHTLSLYVADGYESY QKTPGGWKNGGGPDRFCLMPEESESTWDIRDDLSFVHLYCTDEHLRDVGEKIWDKRPLSL TLEEKIFGSDPKITALYRQFLLGCDWQQNANQLTLSTASTLLLTHLVQHYSSVQWKLPVV TGGLSPFVLRNVLAFIEENLAQPLTLAELAGQAALSEYHFARMFRQSMGLAPHQYVMQRR MEKAKALVQHTTTPLTDIALACGFNSASHFSNRFRSMTGITPSQLRAAKA >gi|333596725|gb|GL892087.1| GENE 67 83778 - 84944 1247 388 aa, chain - ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 9 383 96 470 478 444 69.0 1e-124 MRSTTSLFPAVLAGFVAVLVGYASSAAIIWQAAAAAGASSQQIAGWMTALGLGMGISTLA LSWWYKAPVLTAWSTPGAALLATSLQGVTLAETIGVFIFANALILLCGVTGLFARLMKLI PHSLAAAMLAGVLLQFGLKAFSNLEGQGVLCGSMLAAWLVAKAVAPRYAIVATLLVGILV AWAGGDVVTDKMTLSVVMPEFIAPAFTFTSMISIGLPFFLVTMASQNAPGFATMQASGYP LPVSPLIVATGGLALLLSPFGVYSVCIAAITAAICQSQDAHPDASKRWLAAAAAGGFYLL AGVFGGSISGLMAALPLSGVQTLAGLALLGTISGSLYQALNHEAERDAAIVTFLMTASGV TILGIGSAFWGLVLGGICYAVLSRLRRA >gi|333596725|gb|GL892087.1| GENE 68 85037 - 85564 410 175 aa, chain + ## HITS:1 COG:STM1605 KEGG:ns NR:ns ## COG: STM1605 COG1396 # Protein_GI_number: 16764949 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 2 175 3 177 178 253 71.0 1e-67 MDITQHLATTLKALRQARGWSLSKLAEETGVSKAMLGQIERNESSPTVSTLWKIATGLNV PFSAFITPESDPQAVFDPQQQAMVVKPLFPWDDQLKFDHFSITLSPGALSESTPHEAGVI EHVVVISGVLDMQIDGIWRTIQADSGARFAGDKPHAYRNSSARTVHFHSLIHYPR >gi|333596725|gb|GL892087.1| GENE 69 85645 - 87609 2334 654 aa, chain + ## HITS:1 COG:ECs2039 KEGG:ns NR:ns ## COG: ECs2039 COG0826 # Protein_GI_number: 15831293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 5 653 19 667 667 1235 89.0 0 MRLHSHHLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLRDIAELVPFAHR FGAKVFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGVLELDIPPIELHASTQCD IRTVEKAKFLSDVGFTQIVLARELNLNQIRDIHQATDATIEFFIHGALCVAYSGQCNISH AQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNDQTANLGALIDAGVRSFK IEGRYKDMSYVKNITAHYRQMLDTIIDDRGDLARASAGRTEHFFIPSTDKTFHRGSTDYF VNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDVQVTEPLANGDGLNVMIKREVVGFRAN TVEKTGENRYRVWPNEMPADLYKARPNAALNRNLDHNWQQALLKTSSERRIAVDIALGGW EEQLILTMTCEDGISVTHTLDGLFEVANNAEKALNSLKDGVAKLGQTIYYARNIEVNLPD ALFVPNSLLNQFRRETAEMLDEARLANYPRGSRKAEAVPAPVYPDTHLSFLANVYNHKAR AFYHRHGVQLIDAAYEAHEEKGDVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVN GDEVLTLKFDCRPCEMHVIGKMKNHIFKMPPPGSIVASVSPDDLMKTLPKRKGS >gi|333596725|gb|GL892087.1| GENE 70 87606 - 87812 208 68 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1984 NR:ns ## KEGG: Ent638_1984 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 66 10 75 76 101 80.0 9e-21 MLIGALFSGQVMAEHKGHKFLYVKNADHQLRHEADSDELRSEAEESAEGLREHHAWQKSR KPDTHFPG >gi|333596725|gb|GL892087.1| GENE 71 88083 - 88445 227 120 aa, chain + ## HITS:1 COG:no KEGG:ECL_02021 NR:ns ## KEGG: ECL_02021 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 120 1 120 120 156 67.0 2e-37 MKKIIVLSLLGVVVAAGAAASIYSNEEPEYIQSAKSRVGSYLTSDYGRVECNSTQVSEDR WELGCTNKARGKTFQFAVYPSEQAPYGVSRAFYLEAINDDARQSAEQGLMRYLQINTKAG >gi|333596725|gb|GL892087.1| GENE 72 88597 - 89604 639 335 aa, chain - ## HITS:1 COG:Z2164 KEGG:ns NR:ns ## COG: Z2164 COG4977 # Protein_GI_number: 15801599 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Escherichia coli O157:H7 EDL933 # 9 334 2 325 327 451 67.0 1e-126 MRPPMPENSKKMTNLSHPSPRAVVLAYDGLCTFEFGVAVEIFGLPRPEMGEEWYQFAVAS VDDGELRATGGIRIIADGDLRLLETADVVIVPGWRGLDEPVPEALCQALRAAHARGCQLL SICSGVFVLAASGLLNGRKATTHWRYTQALKTRYPAITVVEDVLYQDEGDILTSAGSAAG IDLCLHVVRRNYGMEAANRVARRLVIPPHRDGSQTQQLSRPVAQLRESQRLGQLFDYLHQ HLAVSHTVESLALRVGMSQRTFLRRFQDATGTTPARWLLTARLQRVKDYLENSRLSIDNI AEQTGFGQSATLRHHFRQQFALSPAQYRKKFLQPG >gi|333596725|gb|GL892087.1| GENE 73 89666 - 90076 379 136 aa, chain + ## HITS:1 COG:Z2165 KEGG:ns NR:ns ## COG: Z2165 COG0607 # Protein_GI_number: 15801600 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 EDL933 # 1 129 1 129 131 200 75.0 5e-52 MSYVTEFPAAEPQEAVGHFLRRLSVETDCADVHHAVSSGEQDFVLLHVVGKPEHFARRHL PGALHLPWSQITAERMKAWPEETLFVVYCAGPHCNGADRAALKLARLGLPVKIMLGGMTG WEDEEFAFAGSASSAL >gi|333596725|gb|GL892087.1| GENE 74 90233 - 91336 1329 367 aa, chain + ## HITS:1 COG:lin0838 KEGG:ns NR:ns ## COG: lin0838 COG0620 # Protein_GI_number: 16799912 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Listeria innocua # 6 367 5 365 367 443 57.0 1e-124 MQRHHAPYRADVVGSFLRPDAIKQARLQFARGEIDAGQLRAVEDEAIRHVVEQQCACGLH VVTDGEFRRAWWHFDFFDGLQGVERYDSQQGIQFNGVQTKAHGVRVTGKLGFGDHPMLDD FRYLKSISGNAQPKMTIPSPSVLHFRGGRKDIDATVYPDLDVYFDDLATTWRDAIRAFYD AGCRYLQLDDTVWAYLCSDDQRRQIRERGDDADELARIYARVLNKALEGKPDDLTIGLHV CRGNFRSTWISEGGYEPVAEVLFGTVNVDAFFLEYDNDRSGDFAPLRFIRPGKQQVVLGL ITTKHGELENPEGVKARLEEAAQYVAKEQICLSPQCGFASTEEGNSLSEAQQWDKVRLVT QIASDVW >gi|333596725|gb|GL892087.1| GENE 75 91539 - 92810 1667 423 aa, chain + ## HITS:1 COG:YPO1187 KEGG:ns NR:ns ## COG: YPO1187 COG0683 # Protein_GI_number: 16121482 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Yersinia pestis # 1 421 1 421 422 749 85.0 0 MHRRTFIKAFALSASVVAMGMSFGVQAAETIKVGIMHSLSGTMAISETPLKDVALMTIDE INAKGGVLGKKLEPVVVDPASNWPLFAEKARQLLSQDKVAVVFGCWTSVSRKSVLPVFEE LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPR TTNKILRAFLHSKGVEDKDIEEVYTPFGHSDYQTIVANIKKFSTGGKTAVVSTINGDSNV PFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFESVDNPTNQTFVAA YRAYAKAHKLPNADTVVTNDPMEATYVGLHMWAQAVEKAGTTDVDKVRAAMAGQSFNAPS GFTLTMDATNHHLHKPVMIGEIEGNGQFNVVWQTEQPVRAQPWSPFIAGNDKKPDQPMKT ASN >gi|333596725|gb|GL892087.1| GENE 76 92835 - 94409 1780 524 aa, chain + ## HITS:1 COG:YPO1188 KEGG:ns NR:ns ## COG: YPO1188 COG0559 # Protein_GI_number: 16121483 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Yersinia pestis # 13 524 19 533 533 571 69.0 1e-162 MNAMRMIIAIVWLTGLLPGMAQASDADDFVAATRSQQTAMLTRWAATPEPARLPLLKALQ QENLYTDSQKQAFTRIDGQMVALGAAKRAEGATKAVRLTNRLRVLTVTALATHQLVSDSV TERRNAARQLQRDAQPDMLGFLQQRANSETDDVTRQSLMLALANLQLASPQAEVRLNAVE LLGQSDDPDVQATLAPFTRAQTEPDARVRAAAAESLEGIQHRLMWGELLGQAFMGLSLGS VLLLAALGLAITYGLLGVINMAHGEMLMLGAYATWMVQQMMAQWMPQWLALYPVVALPVA FCLTAGIGMVLERTVIRHLYGRPLETLLATWGISLMLIQLVRMTFGAQNLEVANPAWLSG GVQVFANLTLPWNRIVVLGFVLLVLFFTWLLLNKTRLGLNVRAVTQNRSMAACCGVPTGR VDMLAFGLGSGIAGLGGVALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGL GIFNKILEPQMGAVLGKILILVAIILFIQKRPQGLFALKGRVTD >gi|333596725|gb|GL892087.1| GENE 77 94409 - 95482 1314 357 aa, chain + ## HITS:1 COG:YPO1189 KEGG:ns NR:ns ## COG: YPO1189 COG4177 # Protein_GI_number: 16121484 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Yersinia pestis # 1 357 1 357 358 465 81.0 1e-131 MSQPLTLTLARSAPRTAQIFGSLLVAALLVLPFLALLPATHPLAISTWMLTLIGKILCYA VVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFW WGTQHFAWALVLIVAIPGLLALVFGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGF GGNNGFTGFTTLLGFSVTATTTRIALFLATVVLLLLALGTGYALAKSKFGRILTAVRDAE NRLTFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGG RGTLVGPVIGAALVNGAKSFFTVAMPEYWQLFLGLIFIAVTLFLSRGVFGLFRKGEN >gi|333596725|gb|GL892087.1| GENE 78 95482 - 96279 199 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 25 252 5 223 305 81 26 1e-13 MQPSEGLFTRQLPGDRYREQTDPVLQLEAINVSFDGFQALTDLSLNIGVGELRCIIGPNG AGKTTLMDVITGKTRPKSGKALYDQSIDLTALEPAAIARQGIGRKFQKPTVFEALTVGEN LEIAMKADRSVWASLRATLSSEQRDRIDEMLVLLRLGSERDRRAGLLSHGQKQFLEIGML LVQDPHLLLLDEPAAGMTDAETEYTAELFRTLAGKHSLMVVEHDMGFVETIADHVTVLHQ GRVLAEGSLREVQANEQVIDVYLGR >gi|333596725|gb|GL892087.1| GENE 79 96289 - 96987 262 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 221 1 226 245 105 26 7e-21 MLRVNELNQYYGGSHILRGVSFEAGVGEVTCLLGRNGVGKTTLLRCLMGLIPVKTGEVVW QGKTITHSKPHQRVQSGVAYVPQGREIFPRLTVEENLLMGLSRFSARNARGVPEEIWQLF PVLKEMKHRRGGDLSGGQQQQLAIGRALASRPQLLILDEPTEGIQPSVIKEIGQVIRSLA NRGDMAILLVEQFYDFAAELADSYLVMSRGSIVQQGRGENMAQEGVRGLVAI >gi|333596725|gb|GL892087.1| GENE 80 97040 - 97678 732 212 aa, chain + ## HITS:1 COG:STM1263 KEGG:ns NR:ns ## COG: STM1263 COG3443 # Protein_GI_number: 16764614 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Salmonella typhimurium LT2 # 4 212 3 215 215 296 66.0 2e-80 MAAQLGKIALTLGTLLVSGSLFAHSHGHQMTEAEQKAANGVFEDKDVRDRTLSDWDGTWQ SVYPFLLDGSLDPVFEKKAQKGEKSAAEVKAYYRKGYATDVDAIGIENNVMEFHRGKTVS SCRYDYSGYKILTYASGKKGVRYLFECKDNASQAPKFVQFSDHIIGPKASSHFHIFMGNT SHEALLKEMDNWPTYYPNEMYKEQVVEEMLHH >gi|333596725|gb|GL892087.1| GENE 81 97724 - 98941 1433 405 aa, chain - ## HITS:1 COG:STM1516 KEGG:ns NR:ns ## COG: STM1516 COG0477 # Protein_GI_number: 16764861 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 387 1 386 395 482 71.0 1e-136 MKPSIRRSTAALLASSLLLTIGRGATLPFMTIYLTRVYDMSVENIGYALTVALTIGVVFS LGFGILADKFDKKRYMLIAIVAFIAGFVAIPLVNNVTLVVLFFALINCAYSVFSTVLKAW FADVLTSSEKARVFSLNYSFLNIGWTIGPPIGTLLVMYSLQLPFWLAAFCAALPLGFIHF FVQKSIASDNVEEKMPWQPSVLLKDRALFWYTLSGLLASYVGGSFATCISQYVLAAHADS DFAEKVVAVVLPVNAAVVVSLQYALGRKITASNIRPLMTAATLFFILGLGGFMLSGENLI YWGIAAAIFTLGEIIYAPGEYMLIDNIAPPGMKASYFSAQALGWLGAAANPMITGLILTH LPHWSLFIIMMAAIIAAWLMILRGMRVKSEESVSGGAALTRPTKP >gi|333596725|gb|GL892087.1| GENE 82 99135 - 100034 1154 299 aa, chain + ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 394 80.0 1e-109 MTRKDGLLALLVVVVWGLNFVVIKMGLHNMPPLMLAALRFLLVAFPALLFVARPKIPLKL LLGYGLTISFGQFAFLFCAIKFGMPAGLASLVLQVQAFFTIILGAFVFGERLQGKQLAGI SLAVFGVLVLIEGSLNGQHVALLGFMLTLAAGLSWACGNIFNKLIMQHEARPPVLSLVVW SALIPIVPFMAASFILDGPQAMLKSLVEIDLTTILSLIYLALVASIVGYGIWGSLLGRYE TWRVAPLSLLVPVVGLASAALLLDETLSALQLCGAGLIMAGLYINVFGLRVRQATRVRG >gi|333596725|gb|GL892087.1| GENE 83 100073 - 100288 321 71 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1996 NR:ns ## KEGG: Ent638_1996 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 69 1 69 70 102 75.0 6e-21 MKFIASAALTLLVLVSGQSFAEQTPCAGQQNNRGTMIMPSTQNQSPWDFNHMGAGSDKSD ELGVPYYNHDL >gi|333596725|gb|GL892087.1| GENE 84 100321 - 100701 413 126 aa, chain - ## HITS:1 COG:STM1519 KEGG:ns NR:ns ## COG: STM1519 COG2207 # Protein_GI_number: 16764864 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 124 18 141 144 224 95.0 4e-59 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS RKLTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRITSMPGESRYLY PLKHCS >gi|333596725|gb|GL892087.1| GENE 85 100722 - 101099 392 125 aa, chain - ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 125 20 144 144 215 90.0 1e-56 MVNQKKDRLLNDYLSPLDITATQFKVLCSIRCEVCITPVELKKVLSVDLGALTRMLDRLV CKGWVERSPNPNDKRGVLVKLTSDGAAMCEQCHQLVGQTLHQELTKNLTADEVATLELLL KKILP >gi|333596725|gb|GL892087.1| GENE 86 101413 - 102078 615 221 aa, chain + ## HITS:1 COG:STM1521 KEGG:ns NR:ns ## COG: STM1521 COG2095 # Protein_GI_number: 16764866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 337 90.0 9e-93 MLDLIKAVGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNQQSMMASVYVFAIMMVAYY AGQLVMNTFGISIPGLRIAGGLIVAFIGFRMLFPAQKAHESPEAKSKSEELESEPSANIA FVPLAMPSTAGPGTIAMIISSASTVRDGTTFPHWVITVAPPIIFALIAIIVWGSLRSSGA IMRWVGKGGIEAISRLMGFLLVCMGVQFIINGVLEIVKTYH >gi|333596725|gb|GL892087.1| GENE 87 102174 - 103370 1513 398 aa, chain - ## HITS:1 COG:STM1522 KEGG:ns NR:ns ## COG: STM1522 COG2814 # Protein_GI_number: 16764867 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 394 1 394 396 550 89.0 1e-156 MTTHTVSRRVAWLRVVTLAIAAFIFNTTEFVPVGLLSDIAASFHMETAQVGIMLTIYAWV VALMSLPFMLLTSQMERRKLLIGLFVVFIASHVLSFMAWNFTVLVISRVGIAFAHAIFWS ITASLAIRLAPAGKRAQALSLIATGTALAMVLGLPIGRIVGQYFGWRTTFFAIGMGALIT LVCLIKLLPKLPSEHSGSLKSLPLLVRRPALMSIYLLTVIVVTAHYTAYSYIEPFVQVVA GFSANFATVLLLILGGAGIIGSILFGKLGNQHASALVSSAIGLLLACLLLLLPAAGSESH LAILSLFWGVAIMIIGLGMQVKVLALAPDATDVAMSLFSGIFNLGIGAGALVGNQISLHV SMSAIGYLGAIPALIALIWSVLIFRKWPVAMEEQTSHG >gi|333596725|gb|GL892087.1| GENE 88 103547 - 104335 957 262 aa, chain + ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 3 261 2 259 259 241 49.0 1e-63 MQEIDFYLVDAFSASSFGGNPAVVCPLDAWLPDETLLRMAQQHNQSETAFFVCTKGGIEL RWFTTLTEVNLCGHATLAAAYVLFNELGYPDSRIHFDTASGRLTVSREGDWMTLDFPACP TQAQTPPPEMLSALGISHYVEARKGRAWVLVLDNREQVEAIKPDFSAMTPGEHKVAVTAR DEGEYDFVSRFFSPGVAVPEDPVTGSAHTMLIPYWSEKLGKTQMFARQVSARGGDVRCEL RGDRVRMGGQASLYLKGTVFLR >gi|333596725|gb|GL892087.1| GENE 89 104358 - 105170 790 270 aa, chain + ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 3 262 2 259 259 243 50.0 2e-64 MQEIDFYLVDAFSDRAFGGNAAAVCPLEAWLPDETLLKMAKQHNQSETAFFVRTDNGFEL RWFTTQDEINLCGHATLAASHVIFEYLDYPHTEITFTTRFVGELMVQRSGDWLTLNFPAW STEVVDTPPAALFSALGINAAKEVRVGRDYMVVLDSQQQVEALTPDIAAMLPLGKMVCVT APGDEYDFVSRFFCPGEGVPEDPVTGSAHSMLIPYWSEKLGKTQMSARQVSLRGGDLRCE LKGDRVLIGGQATLYMKGKIFLRLQDYVQR >gi|333596725|gb|GL892087.1| GENE 90 105167 - 106045 864 292 aa, chain - ## HITS:1 COG:STM1523 KEGG:ns NR:ns ## COG: STM1523 COG0583 # Protein_GI_number: 16764868 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 285 1 285 290 489 84.0 1e-138 MDLTQLEMFNAVALTGSITQAAQKVHRVPSNLTTRIRQLEADLGVELFIRENQRLRLSPA GHNFLRYSKQILALVDEARMVVAGDEPQGLFSLGALESTAAVRIPESLARFNQRYPRIQF ALSTGPSGTMIDGVLEGTLSAAFVDGPLSHPELEGMPVYQEEMMLVTPAGHAEVSKATQV SGSDVYAFRANCSYRRHLESWFHADRVTPGRIHEMESYHGMLACVIAGAGIALMPRSMLE SMPGHHQVAAWPLAENWRWLTTWLVWRRGAMTRQLEAFIALLNERQPPAPRC >gi|333596725|gb|GL892087.1| GENE 91 106145 - 107527 1568 460 aa, chain + ## HITS:1 COG:yneI KEGG:ns NR:ns ## COG: yneI COG1012 # Protein_GI_number: 16129484 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 460 9 470 470 693 76.0 0 MTYSSATHALSVNPATGETLAAYPWATSWDVERAIAQADTGFRQWRRESVAHRAQKLRDL GTALRSRAEAMAQTISREMGKPIVQARAEVAKSASLCDWYAEHGPAMLHPESTQVENAVI EYRPLGPILAVMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVLGSAEMIGQVFADAGFP EGVFGWVNATNDGVSQAINDRRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI VLNDADLDLAVNAAVAGRYQNTGQVCAAAKRFIVEAGVADVFTRRFVDAVAALKMGAPEE EDNYIGPMARCDLRDELHQQVQATLAEGATLLLGGEKIAGSGNYYAPTVLGNVTPEMTAF RQELFGPVAAITVAKDAAHALQLANDSDFGLSATVFTANDALAETFSRELECGGVFINGY SASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKDRV >gi|333596725|gb|GL892087.1| GENE 92 107655 - 109244 1418 529 aa, chain + ## HITS:1 COG:YPO0802 KEGG:ns NR:ns ## COG: YPO0802 COG0840 # Protein_GI_number: 16121114 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Yersinia pestis # 18 528 10 524 547 325 40.0 2e-88 MNLTQIFRRLAQRFIPRQFGLLTGIFCIIGLFSALQLSSSFLLTASLNQAQRNEQRNQLA WQQQSRLDQARVSLLAASDLLNRAGVYFMQDKETGSEGSWHSLMDEAQKSLAASQQAWKG WLALNPPQDEALVNSYQLFYSAIREQAEGLVKTNSIDLFFAVPAQAFQTDFNDNFARYQQ RSEKQAIQGRQSLMEQLSGLQRLFLCAPLVLVAIAIAVWFGMAKWVITPLRRMIVHINLL AAGDLSGTPPDVVRFNREISQLSGSITAMQRGLQQLVTQVSEATTAMVENIGSLAQGNQK LYQQSTRQAKELEEVTAHIADLENHVEGNTGYAKLARSRADEARQAAVGGEHMMSAVNGS MQTIVDRSSEMRGIVAMIDSVAFQTNILALNAAIEAAHAGEQGRGFAVVAREVGLLARKS SHSTQTIQALINHSLQGIEEGSQVVNRLEDNLQQVTGLVANLSSLLNDISLATLNQGESI HQMTRQLQALNQVSRQTDLLVSEASNASARLHQESDLLLQAVSRFRLPA >gi|333596725|gb|GL892087.1| GENE 93 109331 - 110233 929 300 aa, chain + ## HITS:1 COG:ECs2131 KEGG:ns NR:ns ## COG: ECs2131 COG2066 # Protein_GI_number: 15831385 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli O157:H7 # 1 300 9 308 308 526 85.0 1e-149 MLDEILAQVRPLLGQGKVADYIPALASISGNKLGIAICTIDGQRFQAGDALERFSIQSIS KVLSLVAAMRQYDEQEIWQRVGKDPSGQPFNSLLQLEIEQGKPRNPFINAGALVVCDMLQ SRLSAPRQRMLEIVRQLSGVQDIAYDSVVARSEFEHSARNAAIAWLMKSFGNFHNDVATV LQNYFHYCALKMNCVELAQTFLFLAHQGHAPHLGEDVVSPMQARQINALMATSGMYQNAG EFAWRVGLPAKSGVGGGVVAIVPHEMAIAVWSPELDETGNSLAGVAALEQLTKRLGRSVY >gi|333596725|gb|GL892087.1| GENE 94 110233 - 110595 168 120 aa, chain + ## HITS:1 COG:no KEGG:ECL_01989 NR:ns ## KEGG: ECL_01989 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 117 1 117 118 211 86.0 9e-54 MSTLDPLFARLARSTFRSRFHLGTKERQYCWDKGAETIDRHAADFVAARLAPAQPVNDGK QTPMRGHPVFIAQHATATCCRGCLAKWHAIPQGVPLNAQQQQYIVNVIHHWLVIEVNRAS >gi|333596725|gb|GL892087.1| GENE 95 110693 - 111619 815 308 aa, chain + ## HITS:1 COG:slr1142 KEGG:ns NR:ns ## COG: slr1142 COG2203 # Protein_GI_number: 16329891 # Func_class: T Signal transduction mechanisms # Function: FOG: GAF domain # Organism: Synechocystis # 4 147 17 160 169 120 45.0 4e-27 MNALRESGLLEIDNYPAFDRLTRLATRFFRVPLAMITLVDDHAVIVKSADGRVPVSQPRE LSFCGHTILGDAPLVVGDTLRDERFADNPQVAGEPGVRFYAGYPLRLRDGACVGSLCLID YAPREFSAADSAVLADLSALAEDEFAAVSAATTDELTGLFNRRGFNQFAQFALSVSQRRA EPLTLGWLDLDHFKTINDRFGHQEGDKALKAMAALMRSSFREADLLVRFGGDEFAVLFAD TDEPGAWIAMQYLVEQTENYNARQLHPWSLQFSWGLSEFDHHRNDMQAWLKHADAQMYAM KRQHHGEK >gi|333596725|gb|GL892087.1| GENE 96 111702 - 112229 420 175 aa, chain + ## HITS:1 COG:PA1885 KEGG:ns NR:ns ## COG: PA1885 COG0454 # Protein_GI_number: 15597082 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 1 175 1 173 177 170 50.0 1e-42 MNSPMLIKPLSRQDILTHITALNDILVSCVNGGASVSFMLPFSSGKAHTFWLSVAESVGR NERTVLGCFDEEQGLIGTVQLITDQPENQPHRADVAKLLVHEKARRKGAAMALMEALEAV ARAKALTVLVLDTSTGSGAETFYQRAGWQKMGEIPRYALMPNGDMTATSVFYKFL >gi|333596725|gb|GL892087.1| GENE 97 112347 - 113798 1635 483 aa, chain + ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 914 90.0 0 MNTLNRRDFPGARYPERIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVIVRPIQSDFPP SLSTQDGLYTTIIRGLNEQGEAVSDARLIRSVNREISVYSQYDEFLKLAHNPDMRFVFSN TTEAGISYHAGDKFDDAPAVSYPAKLTSLLFERFTHFNGAADKGWIIIPCELIDYNGDAL RELVLRYAQAWALPAAFIAWLNDANTFCSTLVDRIVTGYPRDEVAELEAGLGYHDGFLDT AEHFYLFVIQGPKSLAAELRLDKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAG LDTVGDAMNDAEICAFVEKAIYEEIIPVLDLPRDELHSFASAVTGRFRNPYIKHQLLSIA LNGMTKYRTRILPQLLAGQKATGKLPARLTFALAALIAFYRAERNGERYPVQDDAHWLER YQQLWTQHHDKQVTTRELVSSVLSVSEHWEQDLTQVNGLVEQVAQDLDAILRKGMRDAVK PLC >gi|333596725|gb|GL892087.1| GENE 98 114000 - 114914 995 304 aa, chain + ## HITS:1 COG:STM1527 KEGG:ns NR:ns ## COG: STM1527 COG3781 # Protein_GI_number: 16764872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 304 12 315 315 496 80.0 1e-140 MIVRPQQHWLQLIFVWHGSVLPKIYTRLLLNFLLSIAVIVMLPWYTSLGIRFTVAPFSIL GVAIAIFLGFRNNACYSRYVEARLLWGQLMIAARSLFREVKNTLPDDKHLGEFVRLQIAF ANCLRMTLRRETNAEQLSRYLAPDDLRNVMDANSPANRILLIMGEWLAVRRRSGQLSDIL FHSLNNRLNDMSIVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFV SALISYTFISLDTLAEELEDPFGTEDNDLPLDAICNMMERDLLQMNDEENIPERLMPDKY YQLT >gi|333596725|gb|GL892087.1| GENE 99 114902 - 115450 500 182 aa, chain - ## HITS:1 COG:no KEGG:ECL_01982 NR:ns ## KEGG: ECL_01982 # Name: not_defined # Def: putative acetyltransferase # Organism: E.cloacae # Pathway: not_defined # 1 182 1 182 182 321 95.0 1e-86 MTIPTLTTERLLLKPLVAADAVQIQQRYPRWEIVRYMVASVPWPYPENGAENYVNNVALP DMAKGIAWFWTIRRREAPDELMGVICLYDVEDNNRGFWLAPEFQGQGYMREASIAATDYW FNTLNKPVLRAPKAAANSRSRRISDSSGMRLIRTEKKAYVSGMLDSEVWEITRDEWNARQ VS >gi|333596725|gb|GL892087.1| GENE 100 115599 - 116561 210 320 aa, chain + ## HITS:1 COG:no KEGG:Pvag_1049 NR:ns ## KEGG: Pvag_1049 # Name: not_defined # Def: hypothetical protein # Organism: P.vagans # Pathway: not_defined # 1 320 1 320 320 457 77.0 1e-127 MVLPGINLDKNLPGYDFAKMSGVGAADFDFKALGAAMDCHREFAHAGIIYSDGPQRFLVR PGKRHPQGQSGIVTHVIVNKASSLPSASTAGKALSDAVSSTSMGTEIASTVLSCGAMIIT GGVMLAGTAATPLTAGAGSVLVAIGYAGTAATGLQCVNGLYRIYDLVENDGANVAWLDTQ DWYVATSTSLDVISLASAGGALKEAVTTWRAMKSVSSLKATEWLKSYPRQDRARLTELII RAQNPGISNKEVKALIRAGFYPKRFPTGPVQIELTRQLGQVVTSAAALAGSAVSGVIAAP GNIPRTSKYIIGTIQSLAVF >gi|333596725|gb|GL892087.1| GENE 101 116813 - 117169 70 118 aa, chain + ## HITS:1 COG:no KEGG:ECL_01981 NR:ns ## KEGG: ECL_01981 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 110 85 194 195 105 55.0 8e-22 MSPSLHALSFFVPSLAILIFLLLASAFLARGYTSGLTGFLAIFIILLTLTVLQWFHYLIV SDGSSWQLIIATIALVISRMVLNSRGFVLFTLYCRSKRLATLARIMRQKSIKDNVRNT >gi|333596725|gb|GL892087.1| GENE 102 117166 - 117606 365 146 aa, chain + ## HITS:1 COG:AGc449 KEGG:ns NR:ns ## COG: AGc449 COG0454 # Protein_GI_number: 15887612 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 146 1 147 147 122 45.0 2e-28 MTLIVRPLQAEDYPQWRPLWDSYTHFYECYLDESVTAATWDRALSGSSSLFCRVVVKDGN VIGFAMCVLHEGTWSTAPICYLEDLFVDAAERGAGAGKALIDALIDEGKREGWSKLYWVT RMHNPARKLYDHYGEADDYVRYRITL >gi|333596725|gb|GL892087.1| GENE 103 117741 - 118736 1029 331 aa, chain + ## HITS:1 COG:SMb20216 KEGG:ns NR:ns ## COG: SMb20216 COG0596 # Protein_GI_number: 16263957 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Sinorhizobium meliloti # 33 331 50 348 348 405 65.0 1e-113 MFNKLAYSAVALTVSLGTVMSCQAEAMGKDYASAFNQVKQINAGDLNVGYVDIGPKEGQP VILLHGWPYDIHSYAEVAPALAAKGYRVIVPSLRGYGTTRFISDKTPRNGQPSAMAKDIV NLMDALNIKQAVFAGYDWGARTADIVAALWPERVKSLVSVSGYLISSQAIGKQPLPPKAE VQWWYQFYFATPRGAEGYAKNTHDFARLIWSQASPDWKFSDATFNASAKSLDNPDHVAVT LSNYRWRLGLEKGEPKYDAYEQKLATLPKITVPTITIEGGNNGVPHPAPAAYAGKFTGKY EHRTFGATVGHNPPQEDPQDFVKAVVDADKL >gi|333596725|gb|GL892087.1| GENE 104 118781 - 119521 726 246 aa, chain + ## HITS:1 COG:PA4101 KEGG:ns NR:ns ## COG: PA4101 COG0745 # Protein_GI_number: 15599296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 245 1 245 246 340 70.0 1e-93 MEHIDHILVVDDDRDIRELIVDYLVKSGYHASGAANGKEMRVVLDKQHIDLVVLDVMMPG DDGLTLCRQLRSSRHKDLPILMLTARNEDTDRILGLEMGADDYVVKPFVARELLARIKAI LRRFRTMPPNLQVTEAGRLVVFGEWQLDTVARHLIDNEGLIVALSGAEYRLLRVFLDHPQ RVLTRDQLLNLTQGRDAELFERSIDLLVSRVRQRLNEDARTPAYIKTVRSEGYVFTMPVT IVEANE >gi|333596725|gb|GL892087.1| GENE 105 119518 - 120813 936 431 aa, chain + ## HITS:1 COG:SMb20218 KEGG:ns NR:ns ## COG: SMb20218 COG0642 # Protein_GI_number: 16263959 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Sinorhizobium meliloti # 3 428 12 439 454 430 54.0 1e-120 MTLWPRTLLARLLIIVLLGLLLANALSLTLVMVERMRSARTVMLGNLENDVATSVAILDR LPAKERPEWLERLSRGNYRYILGPGEPGAAPTDKRSRDAVRTLKETLSSQYPLRFTAVPG PISHIQAHLTLRDGAPLTIDLIPRMPPVASWLPVVLVLQLFLVALCSWIAVRQVVRPFLQ FTRAVDSLDPAAHSPMTEKGPVEVRQAAQAFNEMQSRIQTYLRERAQILASISHDLQTPI TRMKLRVEMADQPELRDKLLSDLDNMSRLVREGIAYARSSESLEETTLKLELNAWVNSIA SDYQDIGKNVHFHPCNTRLPIVTRPQALRRVMTNLLDNALKFGDSAVIEIDEDERQVAIR IMDNGPGIPEAELEAVLQPFYRVETSRNRETGGTGLGLAIAAQLTARLDGKLHLANRAEG GLTVSVTLPRG >gi|333596725|gb|GL892087.1| GENE 106 120949 - 122139 1042 396 aa, chain + ## HITS:1 COG:SMb20213_2 KEGG:ns NR:ns ## COG: SMb20213_2 COG0526 # Protein_GI_number: 16263954 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Sinorhizobium meliloti # 253 394 31 172 346 196 57.0 1e-49 MFLIIAFLGGMISLLSPCTLPVIPLLFAGFQGQRKHILALLAGMIAMFTLVAMVVTVASE WIADATVIGRWIALLVLSIAALALIFPQFAQRIARPAVSAGNVLNTHSMQRRGMLSAFLA GLAVGLLWSPCAGPILGAIFSINIAGHSAIATGALLAAYGSGCALMLGLLVVGGRKLIAP LRAKSALMARLRQGAGVMMLAAVAFNASGMTSALKGANGVADKLENALLSLAQPTSRQVK LQPVADAVPSSQLPSLDGGTGWVNGDPVTSDSLRGKVVLIDFWTWDCINCQHTLPYVRDW AKKYQSQGLVVIGVHTPEYPWEKPISSVKNAVNKWQLPYRVVTDNNYKIWSAFGNQYWPA HYYFDAKGQLRYTSFGEGNYDKQEAVIQQLLKEARS >gi|333596725|gb|GL892087.1| GENE 107 122146 - 122904 662 252 aa, chain - ## HITS:1 COG:tam KEGG:ns NR:ns ## COG: tam COG4106 # Protein_GI_number: 16129478 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli K12 # 1 251 1 251 252 399 77.0 1e-111 MADWDPSLYLQYSAERTRPAAELLARVPLADVTTAVDLGCGPGNSTALLKKRWPSAQITG VDNSPAMLEEARQALPDCHFVEADIRHYKPDQPLSLVYANASLQWIPDHYHLLPHLVSLL QLNGVLAVQMPDNWLEPTHALMREVAWEQGYPERGREPLPGIHAYYDILTEAGCDVDIWR TTYFHQMSSHQAIIDWVSATGLRPWLQELNESEQKNYLKRYLELLEEQYPLQENGQILLA FPRLFMVAQRVP >gi|333596725|gb|GL892087.1| GENE 108 122989 - 123573 588 194 aa, chain - ## HITS:1 COG:mlr0150 KEGG:ns NR:ns ## COG: mlr0150 COG0494 # Protein_GI_number: 13470443 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mesorhizobium loti # 8 190 5 187 192 218 57.0 7e-57 MQSKRADIRIINSETLSDNWYNLKKYTFDLQRSDGDWQRQEREVYDRGNGATILLYNRDS KTVILTRQFRFPVFINGHEEDLIEAAAGLLDNLDPESRIKAEAEEETGFKVTRVEKIFEA YMSPGSVTEKLYFYLAEYHPQDRTSAGGGVKAEGEDIDVLEMTLDDALRGIENGQIVDGK TIMLLYHLALKGIL >gi|333596725|gb|GL892087.1| GENE 109 123660 - 124418 633 252 aa, chain + ## HITS:1 COG:AGc4939 KEGG:ns NR:ns ## COG: AGc4939 COG1349 # Protein_GI_number: 15889977 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 248 5 251 266 144 36.0 1e-34 MLTSQRKQLILEKLEAEGQVQSTALSLFFSVSEDTIRRDLRELAAEGRLQRVHGGALPAS SAVAPFAERQSVKMDAKKRVARRGAQLISPGQVVIIDGGTTTSELITFLPPDLQITVVTH SPGIALGLVDHPCIEVILIGGRLYKHSIVTVGAAAIEGINNIHADLFFMGVTGVHPEAGL TTGDYEEACIKRAFSGRAAETVVLASPEKINTASAFVIGDLSRVNTLVVDDTTDERWVKA MKEKGIAVIASQ >gi|333596725|gb|GL892087.1| GENE 110 124523 - 125815 764 430 aa, chain + ## HITS:1 COG:CAC0355 KEGG:ns NR:ns ## COG: CAC0355 COG5434 # Protein_GI_number: 15893646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Endopolygalacturonase # Organism: Clostridium acetobutylicum # 4 401 84 466 513 158 29.0 2e-38 MKAISILACGADPTAQRLSTSAIQQAIDNAQQNDVIVIPPGRFLTGALFLKSGVSLHLDA GAQLVGSQDLADYPLINTRVAGIDMRWPAGIINIIECENVSITGTGTIDGQGAIWWQRFW GDDERSGMVEDYSARGLRWVVDYDCQRPRNILIFESQTILLRDFTSRESGFWNMHLCYSR HIEVEGVQISNSAGPSTDGIDIDSCEQVRVERCIVSCNDDNICIKSGRGYEAAQKARTAR DIVIRGCTLNKGSGITLGSETSGGIERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQ NLRLTDVRFPVLIQLNWFPQYSYGDRGDLADKPEHWRKLAAGVEGDAGLTVVSGLTINNI TARRSDNKCFSRAFFIEGYPERPVAGLTLEGIVIDATEFGKISGVVGMLFKDVQVTAVEI TQECNDSYER >gi|333596725|gb|GL892087.1| GENE 111 125820 - 126437 299 205 aa, chain - ## HITS:1 COG:VCA0253 KEGG:ns NR:ns ## COG: VCA0253 COG0110 # Protein_GI_number: 15601021 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Vibrio cholerae # 1 204 17 220 232 281 61.0 7e-76 MTEKHWSKIEYLHQTVTNPNIHIKGTHSYYSDCWDKGFERSVVRYLLGDEFSRDWEPLGR LDKLYIGNFVCIGAESVILMGGNSTHRMDWISLYPFMESIKEAYVSRGDTILGDGCWLGM RAMIMPGVTIGEGAVVAAGAVVTKNVPPYAIFGGNPAKLIKYRFPEDEITRILALKLYDL PEEKLVSIQPLLSSGEITALENSLR >gi|333596725|gb|GL892087.1| GENE 112 127331 - 128155 100 274 aa, chain + ## HITS:1 COG:ECs3512 KEGG:ns NR:ns ## COG: ECs3512 COG0582 # Protein_GI_number: 15832766 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 21 242 193 382 401 61 27.0 1e-09 MVLSLYGIITPSSAQKHNPLNPFPSGHLQFRNFLIIRLLLNYGLRTGELLLLECSSIKPN LKGDKFSLIVTTVDEAYEPRKNAPSLKNAWANRVLELDKQDYIFLSIYIAKLRPKTDKHD FIFTSSQQSAKPLSYTSVHSIFSKIDQVFTNQYPEYKSPLYSDSLQRLTPHTTRHTWAFL TLQKIWHLKYLKSQQNKTHFIAEVPSLSGIMEEAKDELRLMGGWSPTSQMPDLYAKRFLS EQANAANVQRIIQDNAALHNTLDTIMDRYNDDII >gi|333596725|gb|GL892087.1| GENE 113 129189 - 129707 -18 172 aa, chain + ## HITS:1 COG:RSc1846 KEGG:ns NR:ns ## COG: RSc1846 COG0582 # Protein_GI_number: 17546565 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 3 120 360 481 522 61 29.0 8e-10 MQGASAEEIAHVLGHTSLAVAKYYIMATPALALIRAKALGSNPVWQNMVAMMLTGELVDS AHWKGHPVVGLVGDELHDKIGGCSRNSSTCPFSEVRSCYGCLYYRPFTDGEHQALLECVK KEVDELIAISDGVGNSRNPLILIHETTQFEIESVIARCRFHQEQVKSNEKSL >gi|333596725|gb|GL892087.1| GENE 114 129970 - 132057 325 695 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_1367 NR:ns ## KEGG: Pcryo_1367 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 1 687 95 773 781 569 44.0 1e-160 MSPAVAKATLMILKRWYHAMLYETGQTHPSYLSTVVIQRAMDLLSSVSSPSDPNTANYKG RCVSLQKLVNHFTFTLVKLQYNSDVKYTNKTNLTRKARETMALKQQAKLSDTTTDGEDAL ITIRGFLNIVALIQRVESDAEKIALNCLLLLVITGFRSIEAFNLRQDALFKRQIDDPAIC KRFQDKGLPDYFLGIRYVGVKGAGERTHWVEPLAVPLVESIFSTVKMLTAPIRSHLTYLR AKSFADYLPQAISNMPGERVELDDVVKYITQTTSSFRGRAGQRDKTSKALSKRGVLPVQE IPGPKNSKSIDYSKTALNHYIKTEFGLANANEPCTHAWMENGKRYQVNYEDLLFLHEKGS LALKRTLALLATPIPFTNTLMNKFLGNVEPDGSVFSKYQLLEEDGTSTRMRTHIPRHNIN TFLAIADISDHLQAMLMGRVDITQNQHYQHLALAERRKAASLVPLQPISTALTVSPSSSS IATPLDIVKRTGQLAVTEHMTLDNTIKANLHTFDDRDDVARFVEASFANGLFEDVAAAFE EIRDAEGPEQASDMVARHAVLYPLKFGSCMREVNLWGCPYRLKCQSAAFCEHFTLTGRID ELPNLIAKKQALQQAHSKLTQLTQHQPDYQTRLADIERRLQQLEAIQAQWHRRAKTQQLV AAESVLSGGVITEGKVRTLAQLFALEYQQLMQEND >gi|333596725|gb|GL892087.1| GENE 115 132057 - 132491 372 144 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_1366 NR:ns ## KEGG: Pcryo_1366 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 17 140 1 127 131 117 51.0 2e-25 MRGKELNTLIEHELQLMLVEGFDKSPISAKALHIRLKAKGIVNGGLSTLSSLERKRLIAA YVDQQLGPLNLRPKEKQQYVNRKTRQALLARNQQLQAEVSELRDQLAQNTLSLIEIVKAV KINSVIPVESLLANHMIRELHKSS >gi|333596725|gb|GL892087.1| GENE 116 132696 - 132911 70 71 aa, chain - ## HITS:1 COG:VC0176 KEGG:ns NR:ns ## COG: VC0176 COG1396 # Protein_GI_number: 15640206 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Vibrio cholerae # 1 59 40 98 102 76 61.0 1e-14 MNHYEKGRHVPDIDTLRRMAAELNVPLNYFFCDDQTTAELALLISRMTEEERSNLIEALK RHPGEKHADKK >gi|333596725|gb|GL892087.1| GENE 117 133126 - 133686 39 186 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|322616177|gb|EFY13093.1| ## NR: gi|322616177|gb|EFY13093.1| hypothetical protein SEEM315_02508 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] hypothetical protein SEEM971_16482 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] hypothetical protein SEEM973_04811 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] hypothetical protein SEEM974_15255 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] hypothetical protein SEEM201_17545 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] hypothetical protein SEEM202_15875 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] hypothetical protein SEEM054_00585 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] hypothetical protein SEEM675_19848 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] hypothetical protein SEEM965_11404 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] hypothetical protein SEEM19N_00527 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] hypothetical protein SEEM801_01651 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] hypothetical protein SEEM507_08059 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] hypothetical protein SEEM877_03016 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] hypothetical protein SEEM867_18484 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] hypothetical protein SEEM180_04845 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] hypothetical protein SEEM600_10074 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] hypothetical protein SEEM581_09530 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] hypothetical protein SEEM501_05746 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] hypothetical protein SEEM020_04999 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] hypothetical protein SEEM6152_05961 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] hypothetical protein SEEM0077_00235 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] hypothetical protein SEEM0047_11236 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] hypothetical protein SEEM0055_06148 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] hypothetical protein SEEM0052_16234 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] hypothetical protein SEEM3312_14925 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] hypothetical protein SEEM5258_02688 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] hypothetical protein SEEM1156_04199 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] hypothetical protein SEEM9199_07079 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] hypothetical protein SEEM8282_01931 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] hypothetical protein SEEM8283_01864 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] hypothetical protein SEEM8284_00598 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] hypothetical protein SEEM8285_01595 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] hypothetical protein SEEM8287_05902 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] # 1 186 1 186 186 249 80.0 6e-65 MNSRVSNAESYIFSAIIYIAKDNFTSNDVAQILIERFSLPKSYFKAKAFAYNQIQCLVRK GLLSKVRKSGAYQYVYSVTSEFNVVKKSVELIEAPKKNSSQLVLSATSHEYRNVNIQIRT LIEKYSSELEKVSGAKEIYEELIIAVPSRENEFRKLSLEQEKKQIKINEKINTLIGIFNK TIAIRQ >gi|333596725|gb|GL892087.1| GENE 118 133719 - 133877 79 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKERGQSRVRPLPSHTDKPHYKEDNSVHHYMLVLNKYNPSQREMQPLKFEQY >gi|333596725|gb|GL892087.1| GENE 119 134093 - 134290 89 65 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_3701 NR:ns ## KEGG: Dd1591_3701 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: D.zeae # Pathway: not_defined # 2 65 35 101 101 73 61.0 2e-12 MLGVTQQTYARLESNPSKASFERLYKVLNILGVEISLSSAPLSTYTNPANFVEKEFDSPA RREEW >gi|333596725|gb|GL892087.1| GENE 120 134379 - 135797 430 472 aa, chain - ## HITS:1 COG:no KEGG:MDS_2496 NR:ns ## KEGG: MDS_2496 # Name: not_defined # Def: hypothetical protein # Organism: P.mendocina_NK-01 # Pathway: not_defined # 1 470 1 470 475 509 59.0 1e-142 MPPDYNLLEYHRGAITAPAGCGKTQIIADTLALHTGTRPVLILTHTNAGVTTLRLRMQRA GVSAVAYRIATIDGFAMRLVAMFPARSGLNVEVLQLRNRRTDYPAIRQAACQLLQAGHLN DILAASYAHLIVDEYQDCNLVQHALVTALSTVLPACVLGDPMQAIFGFRGNQLVDWDAHV LSHFPLIGELNHPWRWANAGAPELGRWLLDCRRMLLNGNAIDLRQVPAEVTWVPLRAETV VQQRLTAALTRAVTANGQVLVIGNSYDTRGRQQMASQTPGATTVEAVDLVDLTDFGAAFN LDAADALTRLVQFAAGVMTQVGPAALLPRLETLRRGRARNPPTVAEAALVAFAERPGFTL AAEALRLLTRQDNARVYRPEVLRCCLRALQSAAAGGCTFADATVNERERNRHESRPLARR VIGSTLLLKGLEGEVAVITSPEEMDARHLYVAMTRGSSRLVVCSLTPILTAR >gi|333596725|gb|GL892087.1| GENE 121 135787 - 137523 815 578 aa, chain - ## HITS:1 COG:no KEGG:MDS_2495 NR:ns ## KEGG: MDS_2495 # Name: not_defined # Def: hypothetical protein # Organism: P.mendocina_NK-01 # Pathway: not_defined # 1 577 1 574 575 651 59.0 0 MVRVCKVEIQNFRSIRLLTWLPSPGLNCLMGPGDSGKTTILDAIDLCLGARRNVSFSDTD FFGLDVTQPISITLTLGSLPDALRTMETYGNYLQAFNSATGQIQEEPQLGLETVLCLRLS VDSELEPNWTLVSQRAEVLGQERNLAWKDRLLIAPARFGTYASSNLSWARGSVLNRLTEE RPNLGAELSNAARQARTSFGGQAAVQLAATLDVVTQKANELGVPVGGRTQALLDAHAVSI GDGAIALHNAAGVPLRSLGTGSSRLLVAGMQRAAAQRASVALVDEVEYGLEPHRLTRLLN SLGARETPPPLQVFLTTHSPVAVRELNGNQLFVVRGHPTAPHLVLPVGISDDIQSTVRAD PEAFLARSVIVCEGASEVGLIRGLDHYWTSLNGNSMLSAGTAFVNVGGGEPDRCFVRGLA LSRLGYRVLVLVDADKPPTPATVEAFEAAGGEHITWRAGRALEDELFMSLPDAGVDALLQ RGIELMEEELVAAHIQTQSNGQVTLAHIRQQRHLIGGPYSPEIRQLLGLTARNRRNGWFK SVTRYEDVAHDILGPHLPASDAGFQALISRLYWWAHAA >gi|333596725|gb|GL892087.1| GENE 122 137869 - 140667 1302 932 aa, chain + ## HITS:1 COG:no KEGG:blr8180 NR:ns ## KEGG: blr8180 # Name: not_defined # Def: hypothetical protein # Organism: B.japonicum # Pathway: not_defined # 13 598 6 590 595 511 46.0 1e-143 MRGSEEKSTPDVLDSAQLVRIEAVHRGFLYQHLYAVGCLLLAQKASVEAVTVELDEDIEL NSGQERIYVQVKTRLKPIILSDVSSALARFAELRNEHTDGRRQGSASFVIVANQAPGSHL QKMIEDNMLPADVRFIWPQSTAERHPALPPAWDTVADAAAWCIAQAEQLNFSLLSPESLI WKMAGLVQLAATGGDADGQHAFYTRDLPALFEQLIVQLQDFPAPPTLYRPQREEPSFVSD ERIRIICGLSGAGKTAWAAQAAQHSTQACAYYDAGDLPGPALASTLVRELAARFATQEQG GLRRILLPGASGVEALRTFDTFLQQRNDNLLLVLDNAHRIPVENLRDVLHATTRIHFVLL CQPHDNVRQLEAMTGLQRESLQGWDIDTVAAAVADLGGHASALGYEQLRSYTGGLPLYVE SAARVAAEEYKGDIDTLCAELRQQENSTETAQEVILSRVYQGFEPLVQNALALFSLSDVG LSRDEVSEYLARSLNIPSNGAATLIKKMRATGTIENYGNQTLKVHDAVRALGLQHLTMMD VDIVNNALLALKDLLIESLQQERDTSRFSLLTQIYIKLNDVMTLIALSGEELFYEMGIAV DIMESLKQATASDSLAPLQKFWALDGLVFSELKDGVSEQIAQWLEAMGALLTEHEFGYRE RTAYTMKRMLFLSEKGDLSEVQTLAEDARPSLPDEEHARIFDYNHAIALWRLKRYKQAET LCLSVVNRYYALFGITPQDVMGKNSDVLWAIINQPENVHEHIKHLADALELLARINDAQG KVSPFLRIHAMKFYNMTAAPESLVRVGQDLADEFVAIKDYVGAREVMEQYVLPVVNEAGL VQRLVQVRSQYAVILALAGEHEQAEAEMCRLAPFFEGLTGEQRLEVENQSNYIAQLAYKA AKSEVTRLFGAVGRNEPCPCGSGVKYKKCHGA >gi|333596725|gb|GL892087.1| GENE 123 140951 - 142093 434 380 aa, chain - ## HITS:1 COG:no KEGG:CbC4_4079 NR:ns ## KEGG: CbC4_4079 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 1 237 5 240 381 138 33.0 4e-31 MNETIEKLIASGKEGPWWDFKQTYHQNNATLVHDILCMANVLHDGDRYLIFGVNDEGVIT GVPEDGKQLNQANLIDLLRKVSFAEHHCEDIQLHHITLQHKVLAILQIRNVRMKPYYLTQ DYIKEGKTVRAGVVYTRQQDANTPVTSCASPGDVMAMWRERFNLDLAPADRIVRLLLDYD NWEYDGISEAYYRLDPDYAIHIGYTEKDIGGQHWWSTISIEQPCHYEYILKYRGLVLERV PIVHYRNEGLQFPFPEMDTLAYPGKRDGFVTDYYADVFYFVKNTLPYNLLSHIRELHSLP GRNSGITMPLTTQTKPPIIELPFMVFENAGEKEEKLKFIQSQLADFCPDGMPDTASMKTD PELRMEVERQFSWWVFNHMR >gi|333596725|gb|GL892087.1| GENE 124 141965 - 143323 1492 452 aa, chain + ## HITS:1 COG:SMb20915 KEGG:ns NR:ns ## COG: SMb20915 COG3119 # Protein_GI_number: 16264962 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Sinorhizobium meliloti # 49 437 136 525 537 497 62.0 1e-140 MQDVCHAEDIVNKGCIVLVVGLFKVPPWPFLSTGNQFFDGFVHSPLYPKKEDITIASALK QLGYATGQFGKNHLGDRDEFLPTAHGFDEFLGNLYHLNAEEEPENPDYPKDPAFRKEFGP RGVIKSTADGKIEDTGPLTVKRMGTVDEETLAANNDFMERQAKAGKPFFTWFNTTRMHNK THLKDGSIGATGLGTYADGMVEHDKMIGEVLQKIKDLGIEDNTILIYTTDNGPMTATWPD AGETPFRGEKNTGWEGGFRVPAMIRWPGHIKPGTIVDGMFASYDWFPTLVAAAGDPNIKQ ELLKGYKTSSMTYKVHLDGYNQLDFLQGKGDNQRKEFFYWSDDGDLLAMRYGRWKAHFMI QEHTGLDLWKYPFTKLRTPMIFDLEIDPLEKGSDGMGYNSWFYDRLFLMGGAQKYAKEML ATFKEFPPRQKPGSFTISDASAMLEQGSGINK >gi|333596725|gb|GL892087.1| GENE 125 143415 - 144710 995 431 aa, chain + ## HITS:1 COG:MA2647 KEGG:ns NR:ns ## COG: MA2647 COG0641 # Protein_GI_number: 20091470 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Methanosarcina acetivorans str.C2A # 28 426 8 387 446 420 49.0 1e-117 MKYSTTLPVKALPSAEKYDGKGPEYKRRFHVMAKPTGSTCNLDCSYCFYLHKEELLHQDR HTGMSDEVLENFIRQYIDGQDGDQVVFSWQGGEPTLMGLEFFEKVVKFQKQYQKPGQRVE NDLQTNGVLINDKWAEFLKEHKFLVGLSIDGPRELHDRYRVTRSGKPTFDKVMAGVDALK RHGVPFNALVTVNRTNALFPLEVYRFVTRELGATYVQFNPCVEPVDFKQTAPQFWRDDTI PVTGSRRAHPGDLDSIVTDWSVDPDDWGKFLIAVFEEWVNNDLGRVQVNLFETAVAQTLG LPAQICTHSEFCGKGLAIEKNGDIFSCDHYVYPEYQIGNIENTQLAHLAFSERQKAFGMG KRDTLPKYCKACPYLNMCWGECPKNRIVRAPDGEAGLNYLCPGIKAFFNYAEPILVGIAT LVKRDFAGLKR >gi|333596725|gb|GL892087.1| GENE 126 144707 - 145711 1137 334 aa, chain + ## HITS:1 COG:VCA0175 KEGG:ns NR:ns ## COG: VCA0175 COG0714 # Protein_GI_number: 15600945 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Vibrio cholerae # 10 332 9 315 318 314 49.0 2e-85 MIEREKVLQLEQRMNEQVIGQQELVRMLIIALLCDGHVLLEGLPGLAKTRAVRELARHVE GDYRRIQFTPDLLPSDITGSEIYQQNATREEDQFRFRPGPVFGNIILADEINRASARVQS ALLEAMEERHVTVAGKTWPLPGVFMVLATQNPVDQEGTWPLPEAQLDRFLMKVLVDYPTK QNELKVMQLVRGEQQQKYQQLAASAGTSAPLPETLMLSQQEIAACWQGISAIHVDPTVEE YIVNIVDLSRHPQQVSDTLAGYLSFGISPRGTLALERCGRAQAWLEGRDAVLPEDIKKVA PAVLRHRLMLTWQASADNCTPDDAVQMLLDAVVA >gi|333596725|gb|GL892087.1| GENE 127 145711 - 146616 474 301 aa, chain + ## HITS:1 COG:PA3071 KEGG:ns NR:ns ## COG: PA3071 COG1721 # Protein_GI_number: 15598267 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Pseudomonas aeruginosa # 34 298 37 300 312 128 34.0 2e-29 MSSAVRIERETLIGLAADARAIFNPPGQIPPGALAGERVSRQQGRGMNFDSLRRYQPGDD VRLIDWQATARMRTPWIRLYNEEKERPIFILVDQRRDMFFSTRVQTKSVAAAKIAALLAW RSYHDGDRLGGLIFGDDAYSLHKCRSPAGTLPALLDDIVRFNHQVADNYPEESPHPLTLA SMLRHAITLIPAGSWVALIGDFHDLDNECDALLAALRRRGEVSAFVTLDDLHLRLPSQGK LSARYEGREADFSLSPYLQDGIKQNITARLSDQEKRLTRLGVRVNQIVVADDLLWQLQKG V >gi|333596725|gb|GL892087.1| GENE 128 146617 - 147057 263 146 aa, chain + ## HITS:1 COG:no KEGG:EbC_21230 NR:ns ## KEGG: EbC_21230 # Name: not_defined # Def: conserved uncharacterized protein # Organism: E.billingiae # Pathway: not_defined # 1 146 1 146 146 99 53.0 6e-20 MLEKGFSIPELAEPILPEPPSWLPLPAGWLVMGGVLLIALLVFALIRLARWRRNLWRRQA LEAITQSHSVDSWLVLIKRILLVHHARQTISAYLDPALWLSDLPLDADIRDQLCQRYCQP ENHLSEEETFRLRQQLRSWIEGLPYV >gi|333596725|gb|GL892087.1| GENE 129 147050 - 148027 765 325 aa, chain + ## HITS:1 COG:VCA0172 KEGG:ns NR:ns ## COG: VCA0172 COG2304 # Protein_GI_number: 15600942 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Vibrio cholerae # 10 318 4 317 318 139 30.0 5e-33 MSEYLSQIDFAWPWAWLVLFVPLLGRFLFTRERTVKEYVRVPFLPGLIESLQLNQQPERS GKMATCMFWLVWALMVCALARPEYLTPPQHIEKPMRNIMLILDVSGSMEKNDVAGGLTRL QAVQQSVKKFVAARKSDRIGLVIFANSAWPFAPVSEDKQALETRISQLVPGMAGQQTAIG DALGVTVKLLDSTGDKEASKLAILLTDGNDTASQLTPRLAAQLAVSHHVQLHTIAFGDVN SSGDDKVDLNLLQDLARMTGGRSWTAENSGASLDAVWKEIDAITPVQVKSIGWSWRVPLF AWPLAAALLLLLAFQLYRIVRENKV >gi|333596725|gb|GL892087.1| GENE 130 148024 - 149538 1071 504 aa, chain + ## HITS:1 COG:VCA0171_1 KEGG:ns NR:ns ## COG: VCA0171_1 COG2304 # Protein_GI_number: 15600941 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Vibrio cholerae # 55 315 58 329 336 64 27.0 4e-10 MSDFHFIYTWRLLLLVLCVALWWLPAAGRSAWSRIMDKPLAKALIIGRHRKVGQALPWIA MLGVIALSGPTWQRQLPAALTPQSNVMVILQQDGAMLAGDLAPSRHERMQTKIMTLMERQ PGTRFGLVVYHAGAWLTTPLTVDPTFYSLFLHAQKPGLLPSGEGSGLQNAVSLAMKNMPA SPRSIILVADTLSAEDAAWLGKQRLPLQVWVPGTAQGGALPEKLAGLGIDTRLNVSRFEA IRNAGIPVTLVTANDDDLPVIVSHIEQGVTAQNNARGDLHWRNDGWMLVIPLLGMLFFWR RQLFCWVIIAPLLLWQPAGHAAWLDAWISPDMQGQYAFSRGDYSKAAHHYTDPLRQGIAW YRAGNFPAATAAFRQAQQTPDVLVWTGNALAQQKQWQLALNSYDRALSLRPDWTLAQGNR AKIAAIIMQLRQKERDRQAAQGEEQDYKPDEIKRDLKPDQGVNQKDIQPVAGNTPQVSQW YENLTVSPSGLLENLYRTQPGGAE >gi|333596725|gb|GL892087.1| GENE 131 149535 - 150548 414 337 aa, chain + ## HITS:1 COG:no KEGG:EbC_21200 NR:ns ## KEGG: EbC_21200 # Name: not_defined # Def: hypothetical protein # Organism: E.billingiae # Pathway: not_defined # 9 334 11 335 338 348 56.0 2e-94 MRLLWLIVFLTLPCHAAMNITRELIAPEHVAPGQPVRVAVTFWTDGWFNPPPTWPDFPVE NGDLLTTAIPNQLVTRREGGITWSGVRMERQVAAWDQGTLRLPAQEITFAAAGEAPTTVQ LPPLEKNVTWPRDVQQPDRFLPASRLTLTQQVNIHTTHGDKGLRAGDVIERVVTVRAGDI SPVQIPQLLFAIPGSHSQRLTAKNSLITSGRGDIDGAQRIETLRYLPIEAGEIVLPPIKL RWWDTTHQQWQLAELPGSRYTVGAALNAGAESVLKGKTDLPVSLIALFIALTIAGCMALW FLRHALRRSGQFLTNQYRRFWKPTALPGLVPKNRSHL >gi|333596725|gb|GL892087.1| GENE 132 150545 - 151543 1159 332 aa, chain + ## HITS:1 COG:no KEGG:EbC_21190 NR:ns ## KEGG: EbC_21190 # Name: not_defined # Def: NapD-like protein # Organism: E.billingiae # Pathway: not_defined # 10 328 8 331 342 497 71.0 1e-139 MKRVILGVVLASLCGSAMADPLSAWNDTAAKKAIMEWVKNTTNADRSTYIPPEKRYVVFD NDGTLWPEAPLTFQIQFALDEVKRLAPQHPEWAKEPLVQSVLNNDINAVAAAGEAGLLKL LALTHSDITTTEFDQRVANWVSSKKDPRFDCGYDRLGYQPMRQLLDYLRENGFKTWIISG GGIDFMRVLSQKMYGIPPEQVVGSFALGEFALTPDGAEIKKTMQGAFNDDAANKPVAIHL FMGHRPVAAFGNSDGDLAMMQYTAANPDAKTFGLIVHHTDAEREYAYDSHPPASGKLIEG LQVAKAKGWTVVDMQKDWKTVFDPALCPVTTR >gi|333596725|gb|GL892087.1| GENE 133 152061 - 152327 318 88 aa, chain - ## HITS:1 COG:STM3652 KEGG:ns NR:ns ## COG: STM3652 COG4453 # Protein_GI_number: 16766938 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 88 8 95 95 147 92.0 5e-36 MKSDVQLNIRAKESQRALIDAAAEILHKSRTDFILEMACQAAENVILDRRVFNFNDEQYA EFIDMLDAPVADDPAIEKLLARKPQWDV >gi|333596725|gb|GL892087.1| GENE 134 152416 - 153321 617 301 aa, chain - ## HITS:1 COG:mll1141 KEGG:ns NR:ns ## COG: mll1141 COG0583 # Protein_GI_number: 13471227 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 298 1 294 296 259 48.0 4e-69 MTDPDFNLLVALDMLLSEASVAGAARRLNLSTSAMSRTLSRLRDVTGDPILVRAGRNMVL TPWAEATRDRARRAVHEARAVLQPSTETFNAQSLARLFTIRANDGFVVAFGPALIAAVAD AAPDVCIRFAPKPEKTSRYLREGLVDLEIGVQSNMGPEIRLQRLFEDRFVGVVRKGHPLA TQADIHVDDYVAWGHVVASPEGALHGSVDDALAELGTKRKIASVVPGFPTALSVALESDL IAMIPALYLLNQQVMDQVHVFELPFKSRRITVSQMWHPRMERDPGHRWLREQILAVCGVG R >gi|333596725|gb|GL892087.1| GENE 135 153450 - 154838 783 462 aa, chain + ## HITS:1 COG:BMEII0280 KEGG:ns NR:ns ## COG: BMEII0280 COG0477 # Protein_GI_number: 17988625 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Brucella melitensis # 11 453 20 462 463 270 38.0 6e-72 MTLFSTQPGDEGLPGPARARVMAAIMTTTLMGVFDGTMINIALPSMAQEMHVPASLAVWF ANGYLLAAAMTLAIFAALAARLGYRPVFLAGLATFTLTSLGCALAKSPEVLIGMRVLQGI GGAATLSIAPAILRSVFPGRVLGRILGLHALLIASSSAIGPVLGGTILHTLSWQWLFAIN IIPGAFALLLAVSALPREAVRKQMPFDTPGAILSALLLGSTIMAANSLQDATYHLASLCW TVVAALSGTAFIWQIRRTDNPLLPPTMFKNERFTLAAFTSMIAFVSQGITFIALPFLFQS EYGYSPVVSALLFTPWPLGIVLIAPHAGRWADTISAPVISTLGLMIFVVGLILLAMLPDR PSMWDICLRSLVCGMGFGCFQSPNNREMLSNVSREHASYASGVLSIMRTFGQCLGAAAVG VLLATDDRSIHVALWIAAAASAVSVVVSASRLRKITHPAETG >gi|333596725|gb|GL892087.1| GENE 136 154859 - 155854 1123 331 aa, chain - ## HITS:1 COG:no KEGG:ECL_01955 NR:ns ## KEGG: ECL_01955 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 331 1 331 331 599 89.0 1e-170 MELTQHQADAFARMPLTYLRQEYPNHIMHLLNDDGDVLPPRELHPIFYGCFDWHSAVHGY WLLLRCLRLWPELPCREEIITLFEEHLTDEKVAKELAYFTAPFRASFERPYGYGWLLALA QELKQSSLPQAERWYQTLQPLTRDIRQRLVDYLSKLTYPIRVGTHYNTAFALALGLDYAR AVTDDGLEQAILDAATRFYHKDTQYPAHYEPGGDEYISGALTEALLMSKVVANFPAWFDA FLPEVACVSALMNPAEVSDRTDPKIAHLDGLNLSRAWCMKHIARALPENHPAQQALRDAV ARHLSASVEHVVGSHYSGGHWLASFALLALE >gi|333596725|gb|GL892087.1| GENE 137 155864 - 156850 1398 328 aa, chain - ## HITS:1 COG:RSc2167 KEGG:ns NR:ns ## COG: RSc2167 COG3817 # Protein_GI_number: 17546886 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 4 328 2 318 318 301 51.0 9e-82 MMTLITINRVYYLIGFVVMLLVVMTLRDRANPKRFTTALFWFLFGGIFLFGDLMVQELGK SLAYRIIGGAVIVIALLAGFGLVGKGHYKMATEEERVASSNRLKNWLFLPALMIPVVTVI GTLFLKGVSIGGVYLLDQKQLTLAALCVACVAAILTGWWLTKGTPLHAVRQSRRLVDTIG WAVILPQMLAMLGGVFVVANTGESVQKVVSLFVNPDSRFMLVVIYCVGMALFTMIMGNAF AAFPVLSAGIALPFLINVHHGNPAPLLAIGMYAGYCGTLMTPMAANFNIVPAALLELKDK YQVIKIQIPTALTLLVVNVFLMYFLVFR >gi|333596725|gb|GL892087.1| GENE 138 156847 - 157569 969 240 aa, chain - ## HITS:1 COG:YPO2701 KEGG:ns NR:ns ## COG: YPO2701 COG3819 # Protein_GI_number: 16122905 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 6 228 7 230 243 226 56.0 2e-59 MDSSTLLPLIGIPVVVIGFALRFNPLLVVVVAGLATGLLVGMDFGMLLETFGEKFVNSRS LATFILILPVIGLLEYYGLKERAQAWVAKIASATSARILMLYFVAREGTAALGLMSLGGH AQTVRPLLAPMAEGAALNEYGELPQTIRDKIKAHAAACDNIAVFFGEDIFIAFGAVLLID AFLKENGIEGIEPLHIGLWAIPTAIAALIIHMTRLLRLDASIRRDVMAWKAEQGTQEIAP >gi|333596725|gb|GL892087.1| GENE 139 157794 - 158342 531 182 aa, chain + ## HITS:1 COG:RSc1721 KEGG:ns NR:ns ## COG: RSc1721 COG5631 # Protein_GI_number: 17546440 # Func_class: K Transcription # Function: Predicted transcription regulator, contains HTH domain (MarR family) # Organism: Ralstonia solanacearum # 18 182 24 188 188 161 54.0 8e-40 MTTKKKTTALNHDDITDGRIVSSRHLVSERCAELSELEYALIMTSNAFNKWMVRCMTAAG EPDMGAFDVSLLHHVNHRNRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVTSEKAGKE LFFSTTEEGKALCMKYREVREACLINIHAESGIPGASIGETAQLLRAISSLYDTAARAAA SL >gi|333596725|gb|GL892087.1| GENE 140 158339 - 160414 2398 691 aa, chain - ## HITS:1 COG:STM1558 KEGG:ns NR:ns ## COG: STM1558 COG1523 # Protein_GI_number: 16764902 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Salmonella typhimurium LT2 # 1 691 1 691 691 1217 83.0 0 MPKDTTFEIRAGHGQQLGANYDGKGVNFALFSAHAERVELCLFDPSGKTEIARLELPEYT HEVWHGYVPDLKPGALYGYRVYGPYDPENGHRFNPNKLLIDPYARELVGDIEWNDAHFGY ELGHDELDLSFDTRDSAPFTPKCKVIDPNAVDWQDSRRPDIPWPHTVVYESHVKGFTQLN PAIPPELRGTFEGMGHKASVEYIKSLGITSVELLPVHWFPDDQHLLDRGLKNFWGYNSLA FFAPASRYYGPAGIQGFRDMVRAYHDAGIEVILDVVYNHTAEGNELGPTLSFKGIDNFCY YRTMPDQHRYYINDTGTGNTVNTSHPRVLQMVMDSLRYWAESMQIDGFRFDLGTILGREP EGFDPRGGFFDAVTQDPVLSKLKLIGEPWDIGPGGYQVGGFPPGWGEWNDKYRDTVREYW KGDNVSNDFAARLLGSGDLYDLRGRRPWASVNFITAHDGFTLNDLVSYNEKHNADNGEDN NDGHNDNRSYNYGEEGPTENPDIIATRERQKRNFLTTLFFSHGTPMLLAGDEFGRTQKGN NNGYCQDSEISWVNWEGLTENDEKLREFTRRLIALRAEQPLLRRENWRDGLEIRWFNAGG GPQQSEQWDEGSTLGLAISRPDLVQEESVWHDVLMLFNPFEGTVPFQIPQFGEGGWVLEL STADDAPTGEIITDSVDYELAGRSMTLFRRP >gi|333596725|gb|GL892087.1| GENE 141 160429 - 162897 2485 822 aa, chain - ## HITS:1 COG:STM1559 KEGG:ns NR:ns ## COG: STM1559 COG3280 # Protein_GI_number: 16764903 # Func_class: G Carbohydrate transport and metabolism # Function: Maltooligosyl trehalose synthase # Organism: Salmonella typhimurium LT2 # 1 820 1 841 842 1086 64.0 0 MIPSSTYRIQFRNGMTFDRVVDLIPYMKDLGISHLYASPVFTATTDSTHGYDVTDPNEID PAIGGREGFDRMAAALKQAGMGLILDIVPNHMSTSLENRWWRDVIEHGKKSRYAAYFDID GSRPLTLPFLGDTFEAELERGAITLKRDSVTNSAALVYYDTAYPLNPGTYDESKSIAEIH AAQSWRLMSWREAPKQLSWRRFFEITGLVGVRVEDEAVFADTHRLILELVHAGTVDGLRI DHVDGLADPLGYLQRLRAATGPDCYITVEKILAKGEQLPPEWPVSGTTGYEFIASLAEVL VDDTNLSRLETLHDETLGTIVDRQAELRKAKGLMTDRNFEGEFTTLLKIASELAGHNGAD VEHEDIRHALRELLIAFPVYRTYGTAEGLTPSDVALLSRVVASVNTSEPALSLIVRILTG DVPEHDQALASLFRTRFQQLTGPLMAKSVEDTLFFRHNLELALNEVGADPTPRAFSLSRF HQEMRIRLARQPDALLGTSTHDTKRGEDARARLYTLTEAPDLWSENLARWRQMNQTHVRF LNDGTAPNAADTWMIFQALAGVWPATLSPDDRDGLKSLEARFLGFIEKALREAKQRTDWI DSNEGYESVVLDYVRHLLSPDNTLFLHDFSAALQPFIRAGLMNSMSQTVIKLTAPGVPDI YQGSEGLNFSLVDPDNRREPDFTALAENLSTADATLFNDAQRWRDGSVKQYVTATLLRLR PHYPALFRYGDWLPLKVSGEREEKLIVYARINNDEALIVAVPRLVFDVTDNATLWANTTV AIPQELAGKRYRDLFTGERRRLPETLDLTSEKGCLLVLLTCD >gi|333596725|gb|GL892087.1| GENE 142 162894 - 164681 1312 595 aa, chain - ## HITS:1 COG:STM1560 KEGG:ns NR:ns ## COG: STM1560 COG0296 # Protein_GI_number: 16764904 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Salmonella typhimurium LT2 # 10 594 10 593 594 865 71.0 0 MEFRTCRWHWGAEFISDDVVRFRVWAEGQKDLTLRLTDTDIPMAAMGDGWFQIDVPGIRH GTTYQFVLQDGMAVPDPASRAQQADVNGPSVVIDPRRSLPTRREWQGRPWEETVIYELHI GTFTPEGTFRAAIDKLPYLADLGITQLEVMPVSQFGGARGWGYDGVLLYAPHSAYGTPDD FHAFIDAAHALGLSVVLDIVLNHFGPEGNYLPLLSPAFFHQDRMTPWGNGIAYDVDAVRQ YIAEAPLFWLSEYHLDGLRFDAIDQIHDDAETHILPEIAQRIRDAFPDRHIHLTTEDSRN VIFLHPRDEHGQTPLFTAEWNDDFHNVAHVFATGESHGYYQDFAFEPEKKLARALAEGFV YQGEISLQTGKSRGVECREQPPQFFVDFIQNHDQVGNRAQGERLISLAGAEKTRVLFAAL LLSPHIPLLFMGEEYGETHPFLFFTDFHGDLAKAVREGRAKEFSGHAGHDETVPDPNDLN TFMRSKLDWNKAETEEGRAWLHVTRELIALRQRNIVPLLKQRGAVEGHVLQTALGMVAVS WRFPSGTLSLALNIGKKPLTLPDLSGKTIFSWPEAVENLPPNSIVVRFADGDAAL >gi|333596725|gb|GL892087.1| GENE 143 164813 - 165340 499 175 aa, chain + ## HITS:1 COG:BS_yyaR KEGG:ns NR:ns ## COG: BS_yyaR COG0454 # Protein_GI_number: 16081126 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 39 172 40 171 173 87 33.0 1e-17 MHIRKGLSTDLARLECCDFSFMVDEIAREPFINGDLHIEALTEPYLKTYELDLQTLENHC VNPNSIFLIAETDDGEIAGFITASCNWNKFISVDYIAVERSKRRTGAAHRLMSATHVWAR SLNAPGLRLETQNVNVSACLFYRHYGFILGGYDRYLYNALPEKDEVALFWYYMLA >gi|333596725|gb|GL892087.1| GENE 144 165452 - 166336 996 294 aa, chain + ## HITS:1 COG:AGl509 KEGG:ns NR:ns ## COG: AGl509 COG1028 # Protein_GI_number: 15890360 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 293 24 307 308 360 65.0 2e-99 MSTGNNHTLHYPRPPFAEQPQMAPGLASEMKPIPDHGETSYIGSGKLAGKKALITGGDSG IGRAVAIAYAREGADVAIGYLPEEESDAASVIALIQAEGRKAVAIPGDIRVESFCDTLVE KAVAELGGLDILVNNAGRQQYCESIDDLTTADFDATFKTNVYAPFWITKAALRHLQEGAV IINTTSVQAFKPSAILVDYAQTKACNVAFTKSLAQQLGPRGIRVNAVAPGPYWTPLQSSG GQPQSKVQKFGEDTPLGRPGQPVEIAPLYVLFASDACSYASGQVWCSDGGTGVL >gi|333596725|gb|GL892087.1| GENE 145 166444 - 167421 985 325 aa, chain + ## HITS:1 COG:SMa1811 KEGG:ns NR:ns ## COG: SMa1811 COG0491 # Protein_GI_number: 16263451 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Sinorhizobium meliloti # 3 319 6 320 324 200 38.0 3e-51 MFTVKKLAISTLLTGSVVFFPAIHAVASVPQHVVKQQAGGYNVQVGDTIVTAFTDGSVPQ DLHALLRRTTAENIDALLAKNFQANPVEASINAFYIAIPGHKILVDTGSGQLFGPGKGGR LIESLATQGIRPQDITDILITHAHSDHAGGLVKDGQRVFTHAQVYVGKPDIDFFFNDENQ KKSGYDQNYFDVAHKTLKPYLDAGKVKTFSGTEQLLPGISGTVHPGHTPGSAFYSLESKG EKMTFVGDIIHVAAVQFPQPNVTIAYDEDQDGAARVRNAAFAQFVKNKDLIAAPHLPFPG IGYVAKGERDGYAWVPVTYTNRDAK >gi|333596725|gb|GL892087.1| GENE 146 167440 - 168324 760 294 aa, chain - ## HITS:1 COG:BS_alsR KEGG:ns NR:ns ## COG: BS_alsR COG0583 # Protein_GI_number: 16080655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 259 1 256 302 172 39.0 5e-43 MQFRLMRNFIVVAEELHMHRAAERLNMAQPALSQQIKTLEDRLGVMLFSRANRRLTLTPA GEAFLSKARVAILMTDQAILDARQTARGEQGVLNLGCVSSAIFDSKLPAALRLLHEKWPA ITLSMMTGNVQTLYSAVQSNQLDVAIIRAPLPLLPDDLQSRPFTTEKAVLALPRQHSLAG SAALTLASVKEEKWIALRDPEGMGLEQYFYDACHSAGIQPDVVQNATDVPTVISLVSAGF GIAMLPASAKAICVENVVYVDILDRLRESELTLVCHRIIRSEVLKKLMSILDHT >gi|333596725|gb|GL892087.1| GENE 147 168436 - 169917 1524 493 aa, chain + ## HITS:1 COG:MA0246 KEGG:ns NR:ns ## COG: MA0246 COG0043 # Protein_GI_number: 20089144 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Methanosarcina acetivorans str.C2A # 17 476 11 417 422 167 29.0 5e-41 MENHINDLRSAIELLKRHEGQYLETSHPVDPDAELAGVYRHIGAGGTVKRPTRIGPAMMF NAIKGYPDSRILVGMHASRERAALLLGCEPSELAKHVGQAVKNPIAPVVVPATQAPCQEQ VFYAEDPDFDLRKLLPAPTNTPIDAGPFFCLGLVLASDPEDASLTDVTIHRLCVQERDEL SMFLAAGRHIEVFRKKAEEAGKPLPVTINMGLDPAIYIGACFEAPTTPFGYNELGVAGAL RQAPVELVQGVAVNEKAIARAEIIIEGELLPGVRVEEDQHTHTGHAMPEFPGYCGEANPS LPVIKVKAVTMRHQAILQTLVGPGEEHTTLAGLPTEASIRNAVEEAIPGFLQNVYAHTAG GGKFLGVLQVKKRQPSDEGRQGQAALIALATYSELKNIILVDEDVDIFDSDDILWAMTTR MQGDVSITHLPGIRGHQLDPSQAPDYSPSIRGNGITCKTIFDCTVPWALKSRFERAPFME VDPTPWAPELFKK >gi|333596725|gb|GL892087.1| GENE 148 170048 - 170335 145 95 aa, chain + ## HITS:1 COG:YPO1157 KEGG:ns NR:ns ## COG: YPO1157 COG4628 # Protein_GI_number: 16121453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 69 1 69 81 102 65.0 2e-22 MTAHISNDPLHGVTLEMQVNALVARYGWNELGNRIKINCFRKDPSVKSSLKFLRRTPWAR AEVEALYLDSLHDDGNGEQDEPAFNPWTDSRTPRS >gi|333596725|gb|GL892087.1| GENE 149 170343 - 171632 1092 429 aa, chain + ## HITS:1 COG:Z2217 KEGG:ns NR:ns ## COG: Z2217 COG1649 # Protein_GI_number: 15801647 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 20 429 27 439 439 645 77.0 0 MMRHVKRTGALLGCALLLVSCTSRPPKSLVTPLPQAKPVQQTNEPMRGIWLATVSRLDWP PVSSVNGRSAEQRIAQQQKALTDKLDKLKNLGINTVFFQVKPDSTALWASKILPWSDTLT GTIGEDPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSTNTKPSTIAALNRTSSLHPSSVYV QHPEWIRTSGDRFVLDPGIPEVRDWITQVVMEVVDRYPVDGVQFDDYFYTETPGSPLNDA WTFRRYGEGFASKADWRRHNTQQLIVQVSRAIKQAKPEVEFGVSPAGVWRNRSFDPAGSD TRGAAAYDESYADTRKWVQQGLLDYIAPQIYWPFARDAARYDVLTKWWADVVKPTHTRLY IGIALYKVGAPSRNEPDWTVNGGVPELKKQLDLNDSLPDVKGTILFREDYLNQPQTQEAV NYLRGRWGS >gi|333596725|gb|GL892087.1| GENE 150 171671 - 172447 903 258 aa, chain - ## HITS:1 COG:dsbG KEGG:ns NR:ns ## COG: dsbG COG1651 # Protein_GI_number: 16128587 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli K12 # 26 257 38 268 268 268 56.0 9e-72 MLQRLAKKKVLLLSALMVTGLVRAEESLPDVVKHFSEQQDIKIIKKIDAPGGAPAWLGKY QDMGVTLFLTPDGKHVVSGYLYDEKGTNLSEAFFQKEIYAPMGREMWKKLNAAHPLKEGA ETAPRKVFVFADPFCPYCKQFWAEAQPWVTAGKVQLNTLLVAFLNPNSGRNASAILNAKD PVSAWKAYELSGGKKLPKPEGAASRETVAILQNHQTLMDSLGANATPAIYYLNEQNELQQ VVGMPDAKQLEAMFGPKP >gi|333596725|gb|GL892087.1| GENE 151 172489 - 173046 384 185 aa, chain - ## HITS:1 COG:no KEGG:ECL_01937 NR:ns ## KEGG: ECL_01937 # Name: not_defined # Def: RNA polymerase, sigma-24 subunit, ECF subfamily # Organism: E.cloacae # Pathway: not_defined # 1 184 4 190 191 257 78.0 2e-67 MKAGEAGESLLISALNACRARLKAFIRGRTAVRDDVDDILQEVTWQLMKVEQPVENVAAW LFRAARNEMIDRARKKHEVSLPGYLTADEEDFPEQEIAETLFGVPQTPEEEYLNMLLWEE LGQALSELPPPQREVFEKTEFEGYSMKVLAEETGDSVQALLSRKHKAVRFLRSRLKDIYE ALTGQ >gi|333596725|gb|GL892087.1| GENE 152 173052 - 173450 364 132 aa, chain - ## HITS:1 COG:no KEGG:ECL_01936 NR:ns ## KEGG: ECL_01936 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 16 132 21 139 139 191 85.0 8e-48 MHGKGHGRGLGRHRTGKGIVIGAVLFVVLGLLVMSLWNALLPAILGVKAIGFWQALGILL LSRILFGGLGFRPGMFGAHRRMHEQWMNMSPEQREAFIQQRRAGFGRHGHCRWHDGRDEK RDDNAAKAPEAE >gi|333596725|gb|GL892087.1| GENE 153 173655 - 175205 1507 516 aa, chain - ## HITS:1 COG:STM1626 KEGG:ns NR:ns ## COG: STM1626 COG0840 # Protein_GI_number: 16764970 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 10 516 28 533 541 286 39.0 9e-77 MSLKKSSLIILFSLLFFFVASILTSVGLIIKSNNSLDNVNKEIQVVLSIIDPINHSRTLR VRVMEYVKMVEAGDATDSSAKLASVKEALTKADSAFSAFMASPRLPDEAPLVAAYQEAWQ NYRNQGLAPLIAAAAAHDVSRFNALIPVVSQLDRQYEIVLDQVLSVHQKYAKTLNEDASR NFVSGLVIIACIAVLFVVVIFAVSLLMKRVVFAPVNLAREHCRQIADGKLDVPVPVKRDS GNEIDHLMSSMEQMRQALLSTISQVRDASHTVTHAAQEIASGNIDLASRTEQQASALTQT AASMEELSATVANNTDNVFQAGKLVQDAVKNAHTGEAVTREVIETMNTIASNSKRIEDIT SVINSIAFQTNILALNAAVEAARAGTQGRGFAVVASEVRTLAQKSAVAAKDIESLIAQSV SSVKKGAELVNRSGEVIDSIISSVNKVNTLMEQISVASEEQSRGIGQVGQAVTEMDGVTQ QNAALVQQSAAAAASLEEQAQQLSQSISSFSLPATA >gi|333596725|gb|GL892087.1| GENE 154 175301 - 176317 992 338 aa, chain - ## HITS:1 COG:PM1847 KEGG:ns NR:ns ## COG: PM1847 COG1609 # Protein_GI_number: 15603712 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 317 7 324 339 270 41.0 3e-72 MRKTKRVTIKDIAALAGVSKATASLVLNGRSKELRVAEETRERVLAIAKEHHYQPSIHAR SLRDNRSHTIGLVVPEITNYGFAVFSHELETLCREAGVQLLISCSDENPGQETVVVNNMV ARQVDGLIVASSMLNDADYQKLSEQLPVVLFDRHMNDSSLPLVLTDSITPTATLVADIAR QHPDEFYFLGGQPRLSPTRDRLEGFKQGLRDANVELRPEWIIHGNYHPSSGYEMFAELCA RLGRPPKALFTAACGLLEGVLRYMGQHNLLQSDIRLASFDDHYLYDSLTIPVDTVRQDNR QLAWHCFDLIGKLIEGETPEPIQRKLDATLQRRYKAAK >gi|333596725|gb|GL892087.1| GENE 155 176346 - 177752 1075 468 aa, chain - ## HITS:1 COG:BH1858 KEGG:ns NR:ns ## COG: BH1858 COG1621 # Protein_GI_number: 15614421 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus halodurans # 30 466 32 485 487 390 46.0 1e-108 MTLTSRWPAVLQAVMQGQPRALADSHYPQWHPAPVTGLMNDPNGFIWFAGRYHLFYQWNP LGCDHRYKCWGHWSSADLVHWQHEPMALMPDEEYDRNGCYSGSAVDNNGVLTLCYTGNVK FDDGGRTAWQCLAVQNDDGTFAKLGPVLPLPDGYTGHVRDPKVWRHDGRWHMVLGAQDRQ KRGKVLLFTSADLHTWASCGEIAGHGVNGLTDAGYMWECPDLFALDGTHVLICCPQGLAR EPHRYLNTFPAVWMSGAFDYQTSAFAHGELHELDAGFEFYAPQTTVAEDGRRILIGWMGV PDGEEMLQPTRAHGWIHQMTCPRELRYRDGKLWQTPVRELETLRESEHHWQGRADAAPEL DGARLEFELSTSRVNVDFAGALRLVVDDEGLRLERASLKTGETLTRYWRGHVHHLRVLCD RSSVEIFINHGEGVMSSRYFPDHPAQVRFEGASDITLRYWSLRSCMIE >gi|333596725|gb|GL892087.1| GENE 156 177752 - 179122 1855 456 aa, chain - ## HITS:1 COG:BH1856_2 KEGG:ns NR:ns ## COG: BH1856_2 COG1263 # Protein_GI_number: 15614419 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 97 454 1 360 362 385 61.0 1e-106 MDFNHIARELIPLLGGKENIASAAHCATRLRLVLVDDALADQQAIGQVEGVKGCFRNAGQ MQVIFGTGVVNKVYAAFIQAAGISESSKSEAADIAARKLNPFQRIARLLSNIFVPIIPAI VASGLLMGLLGMVKTYGWVNPDNALYIMLDMCSSAAFIILPILIGFTAAREFGGNPYLGA TLGGILTHPALTNAWGVASGFHTMNFFGLEIAMIGYQGTVFPVLLAVWFMSIVEKQLRRA IPDALDLILTPFLTVVISGFIALLIIGPAGRALGDGISFILSTLIAHAGWLAGLLFGGLY SVIVITGIHHSFHAIEAGLLGNPSIGVNFLLPIWAMANVAQGGACLAVWFKTRDAKIKAI TLPSAFSAMLGITEAAIFGINLRFVKPFIAALIGGAAGGAWVVSVHVYMTAVGLTALPGM AIVQASSLLNYIIGMVIAFGVAFTVSLLLKYKTDSE >gi|333596725|gb|GL892087.1| GENE 157 179189 - 180706 1927 505 aa, chain - ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 96 505 26 423 423 86 26.0 1e-16 MYKKRRLAVMIGMLAGSTSVFAQTDMTRIEARLAALEQRLQEAETRAQVAEKRATAAEQK TQQLVAAQQKAQTTTQAVAQRTTALEEKADRTGGFEFHGYARSGLLMNDAASSSKSGPYL TPAGETGGAIGRLGNEADTYVELNVEHKQTLESGATTRFKAMLADGQKTYNDWSADSSDL NIRQAFAELGNLPDFTGALKGSTFWAGKRFDRDNFDIHWLDSDVVFLAGTGGGVYDVKWN DTLHSNFSLYGRNFGSEEEIDNNVQNYILSMNHFAGPVQMMVSGLRAKDNDDRKDSNGDP IKTDAANNGVHALVGLHNESFYGLREGSAKTALLYGHGLGAEVKSIGSDGALLSEADTWR FASYGVTPLGGGWHIAPAVLAQSSKDRYVKGDSYEWVTLNTRLIKEVTQNFALAFEGSYQ YMDLHPEGYKDRNAVNGSLYKLTFAPTLKAGKIGDFFSRPELRLFATWMDWSSKLDNYAS DDAFGSSGFNAGGEWNFGVQMETWF >gi|333596725|gb|GL892087.1| GENE 158 180876 - 181772 730 298 aa, chain - ## HITS:1 COG:ECs3242 KEGG:ns NR:ns ## COG: ECs3242 COG0524 # Protein_GI_number: 15832496 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 4 298 5 303 304 370 63.0 1e-102 METIWVLGDAVVDLLPDGEGKLLRCPGGAPANVAVGIARLGGKSAFIGRVGDDPFGRFMQ KTLENEKVNTERLRLDPQHRTSTVVVDLDDDGERTFTFMVRPSADLFLDIADLPPFRAGE WLHVCSIALSAEPSRSATFHAMSAIRQAGGFVSFDPNIRADLWHDEVELRHCLERALACA DVVKISVEELGFLTGNAQVHEGLAALMRTCPARLVLVTQGKEGVTAWQEGTLTHYPASPV ECVDTTGAGDAFVAGLLFGLAHDGEARLSEVITLAQRCGALATTAKGAMTALPYHHEL >gi|333596725|gb|GL892087.1| GENE 159 181861 - 182841 1008 326 aa, chain - ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 95 324 13 242 243 239 48.0 4e-63 MRDYGPRRRFDNVGMLLFDLDVETPKAVLASVLHYSKLESYLTSEDRVFKFIQTFITGKA AVPPASDYEPDKWTLSPERAPFGEGLGLLAGQPCQFALQPIIEPSEGKISSLEALIRGND GGSPEHFFRSLDREQIYQVDLETKAWTFALAQKLGIGSHKLAVNLLPMSLVNVPGAVEFL VTQIKKHGLQPEQVIIEVTENEMISGFNQFNSAIKQLRAEGVGLAIDDFGSGYAGLSLLT RFQPDKLKIDREIVSDIHLSGPKQAIVKSIISCCTDLEITLVAEGIEKTEEWCWLESAGI RRFQGFLFARPLLNGVGDIHWPHRLR >gi|333596725|gb|GL892087.1| GENE 160 183159 - 184634 1351 491 aa, chain - ## HITS:1 COG:YPO4014 KEGG:ns NR:ns ## COG: YPO4014 COG2267 # Protein_GI_number: 16124137 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Yersinia pestis # 17 488 11 482 487 571 59.0 1e-162 MANLPWRVSVRLMALAKKIAMVIGIIVLVLLAVRVYLSQQGPALHHWHTWRADEMSVQEI DNASFAAYVARENAIFTALDAEVTAKVTPAERTPLNRYYRQSLVWPGHFSPDANRSFVLM PAGKPRGAVVLLHGLTDSPYSVRHLALNYQKHGFVAVVPRLPGHGTAPGALTNVEWEAWL AATRLAVREATRLTGNDLPLHLVGYSNGGALAMKYALDALDAPELRKPQQIVLLSPMIGV TAFARFAGFAGLPALLPAFAKAAWLNISPEYNPYKYNSFPVNAARQSWLLTRALHEQINR DVHDHKLTQLPPVLAFQSVMDSTVSTRAVVTGLFDQLPANGSELVVFDINQAGSFRPLFK SASWTAVADLLPEAKRRYSVTIVTNASPDRFNMVAKTTPAGSTQESVAPLSVSYPQEVYS LSHVAIPFPPDDDLYGRHPEVKNRYGISLGTIALWGETSVLSVGKDALMRMTSNPFYDYM QTRIDSRIREH >gi|333596725|gb|GL892087.1| GENE 161 184902 - 185756 846 284 aa, chain + ## HITS:1 COG:AGl824 KEGG:ns NR:ns ## COG: AGl824 COG1737 # Protein_GI_number: 15890529 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 222 17 219 277 80 25.0 3e-15 MTTKPEVLSRIEATFSQLTPSEKRVASWMLAHVGQIPFETAESVALATSTSGITVGRFLR KLGYRNLDDAKKSLRDPHQPWGINERLDSWKQQQPLSDRLQHSLSLEVDAIAHVYQLAQS ETFRQVVQHLTHADAVFVLGIQSTRGIANAFFSHLEYLRPRVSYSEGLSGSWVESLNSGF ANPYIVLTDTRAYSAIARQYCRVASEKGLSMALITDIWCPWARDYPIDLLQVKTDTGHFW DSLAPVSCLFNLLLSGVVEALGDALPERLAINRQLQQEFGQFER >gi|333596725|gb|GL892087.1| GENE 162 185769 - 186341 742 190 aa, chain + ## HITS:1 COG:ddpX KEGG:ns NR:ns ## COG: ddpX COG2173 # Protein_GI_number: 16129447 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine dipeptidase # Organism: Escherichia coli K12 # 1 184 1 184 193 303 77.0 8e-83 MPEESQLIDVAKTFPTLHIDLKYATADNITGRPIYQHAACLLHTDAATALAKSISIAALA GLKLVVYDAYRPQQAQAQLWDACPNPEYVVDVAIGSNHSRGTAIDVTLMDEHDNVLDMGA GFDEMHDRSHAWHPSVPPEAQRNRLLLNAVMSGGGFVGISSEWWHFELPNAASYPLLDDQ FACYPTTHSL >gi|333596725|gb|GL892087.1| GENE 163 186357 - 187889 2051 510 aa, chain + ## HITS:1 COG:ECs2091 KEGG:ns NR:ns ## COG: ECs2091 COG0747 # Protein_GI_number: 15831345 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 8 510 10 516 516 862 85.0 0 MKTTLLTTLIAATLALSAPLALAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPSYQ RLVKYKPGTTEVEGDLSTGWKASDDQKEWMFTLADNAKFSDGTPVTAEAVKLSFERLLKI NQGPSEAFPKDLKVDAVDAHTVKFTLSQPFAPFLYTLANDGASIVNPAVLKANAADDARG FLAQNTAGSGPFMLKSWRKGQQLVMVPNPHWPGEKPHFKRVSVKIIGESASRRLQLSRGD LDIADALPVDQLAALKQEGKVAVAEYPSLRVTYLYLNNSKPPMNQVDLRRAVSWATDYQG MVKGILSGNGKQMRGPIPEGMWGFDANAMQYSFDEAKAKAALEKVNDKPASLTFLYSDND PNWEPIALSTQASLSKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNY WFESDKKGLPGNRSFYENKEVDALLQAALKTTDQAERTKDYQQAQKVVIDEAAYIYLFQK NYQLAMNKEVKGFTFNPMLEQVFNIATMSK >gi|333596725|gb|GL892087.1| GENE 164 187913 - 188935 300 340 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 70 332 46 310 320 120 27 3e-25 MTFWSIVRQRCWGLILVVAGVCIITFIISHLIPGDPARLLAGDRASDDIVQGIRQQLGLD QPLYIQFGRYVEALAHGDLGTSIRTGRPVAEDLKAFFPATLELAFCSLLLALVIGVPLGI LSAVYRNRWLDHLVRLMAMTGISTPAFWLGLGVIVLFYGQLQILPGGGRLDDWLDPPAHV TGFYLLDALLEGNGEVFFNALQHLILPSLTLAFVHLGIVARQVRSAMLEQLSEDYIRTAR ASGLPGWYIVLRYALPNAMIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQAL DFPAVMGFAVVVSLAYVFVNLVVDLLYLWIDPRIGRGGAE >gi|333596725|gb|GL892087.1| GENE 165 188932 - 189828 1074 298 aa, chain + ## HITS:1 COG:ECs2089 KEGG:ns NR:ns ## COG: ECs2089 COG1173 # Protein_GI_number: 15831343 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 466 84.0 1e-131 MMLTQETPVPVSTAKQRINWAKLFWMLRKSPLTLIGGVIMIVMLLMMVVSPWIVPHDPNA LDLTARLQAPSAQHWFGTDEVGRDLFSRVLVGSQQSITAGLAVVVIAGGIGSLLGCLSGV LGGRGDAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQTL VVRQFTYVQAARTFGASRWHLISWHILRNALPPLIVQASLDIGSAILMAATLGFIGLGAQ QPTAEWGAMVAVGRNYVLDQWWYCAFPGAAILITAVGFNLFGDGLRDLLDPKSGGKQS >gi|333596725|gb|GL892087.1| GENE 166 189825 - 190811 484 328 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 320 8 327 329 191 36 1e-46 MSDSVLSIEDLHLSFPIFRGDVHALNHVSLEIGRGEIVGVVGESGSGKSVTAMLAMRLLP EGSYHVHHGRVTLLGEDVLNASEKQLRQWRGARVAMIFQEPMTALNPTRRIGRQMVEVIR QHQSLSRRDAQQKAIALLGEMQIPDAAQVMDRYPFELSGGMRQRVMIALAFSCEPELIIA DEPTTALDVTVQRQVLRLLKHKARASGTSVLFISHDMAVVSQLCDRMYVMYAGSVIESGS TQTLIHHPVHPYSIGLLRCAPENGEPREILPAIPGTVPNLSHLPRGCAFRERCFAAGAKC SETPRLISTGAEGQQAACWYPQQEKRHV >gi|333596725|gb|GL892087.1| GENE 167 190804 - 191730 622 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 304 8 324 329 244 41 1e-62 MSEVLLELDSVHVNFPARKNWLGRVTEQVHALNGMDLRIHRGETLGVVGESGCGKSTLAQ LLMGMLKPSTGACQRANAAGGMQMVFQDPLSSLDPRLPVWRIITEPVWIQQRRSERERRQ LAGTLAQQVGIRAEYLDRLPHAFSGGQRQRIAIARALSSDPDIIVLDEPTSALDISVQAQ ILNLLVALQQQRNLTYVLISHNVSVVRHMSDRVAVMYLGQIVELGPADQVLGQPRHPYTQ LLLDSVPRTGEPLDEELALRKTDLPGNRHLPDGCYFRDRCPLATEGCERPQPLQPAEGGR SVRCWRNR >gi|333596725|gb|GL892087.1| GENE 168 191727 - 192476 824 249 aa, chain - ## HITS:1 COG:AGpA300 KEGG:ns NR:ns ## COG: AGpA300 COG1028 # Protein_GI_number: 16119439 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 249 1 251 251 264 61.0 1e-70 MNTTLAGKIALVTGGSTGIGLATAQELAAQGAKVYITGRRQAELDSARADIGAAAVAIRA DVSRMADLDAVYAQIAKEEGRLDILFANAGGGDMLPLGAITEEQFDRIFATNVRGVLFTV QKALPLLSSSSSIILTGSTVSIKGTANFSVYSASKAAVRNFARSWALDLQGRGIRVNVVS PGPVKTPGLGDLVPEEQRQGLYDALAAQVPLGRLGAPGEVGKAVAFLASDAASFINATEL FVDGGMAQI >gi|333596725|gb|GL892087.1| GENE 169 192626 - 193519 723 297 aa, chain + ## HITS:1 COG:AGpA302 KEGG:ns NR:ns ## COG: AGpA302 COG0583 # Protein_GI_number: 16119440 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 293 5 297 313 287 48.0 2e-77 MAMRAFTRVVESGSFTRAADSLNMPIATLSKLVKSLEAHLETRLLHRTTRRVVTTAEGME YYEKVLRVLIDIEDIDTAFRASCCTPKGHLRIDVGGSTARDVLIPLLPDFFQRYPDLRIS LGVADRPVDLISGNVDCVIRGGPLDDSSLIARHIGDARMIACATPGYLKTHGIPAYPQEL RNGHKLISYLSPVTGRAFPFRFLERGEPLEISVPHHLGVNESNAHLAAALAGLGIIQTFG YAARAHLKTGALVEILSDWRPKAYPFHVVYPQSRHLTHRLRVFIAWLAEVFPAAVKG >gi|333596725|gb|GL892087.1| GENE 170 193543 - 193971 603 142 aa, chain - ## HITS:1 COG:osmC KEGG:ns NR:ns ## COG: osmC COG1764 # Protein_GI_number: 16129441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli K12 # 1 141 1 141 143 241 87.0 3e-64 MTIHKHGSAHWSGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACF SMALSLMLGEAGYTADSIDTTADVSLDKTDSGFAISKVALQSKVTVPGIDPQQFDGIIQK AKAGCPVSQLLKAEITLDYKLN >gi|333596725|gb|GL892087.1| GENE 171 194041 - 194928 814 295 aa, chain - ## HITS:1 COG:YPO0799 KEGG:ns NR:ns ## COG: YPO0799 COG0583 # Protein_GI_number: 16121111 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 292 1 293 302 236 42.0 4e-62 MDRVIAAQVYNRICELGSLSAAARALGISRPMVSRYLEQMEKWAGARLVNRSTRKLTLTA AGEKVLQKTRTLSQISQEIEDQSVKESPSGTLRVACAHFTAMQIIAPVLPDLLQSYPQLR IELDVNNHPVSLVGERIDVAIRITDNPEPGMIARRLGECRSVLCASPLYLASRGVPEQLE DLARHNCLHYSFFAGQSWRFLSPEGEPVTTAVSGNLSASISSLLMEAAINHCGIAMLPER EADAALRQGSLVPVLSAFTPKPIGIFGIYQSRDYQPAAQRVFLDALANHLATRSD >gi|333596725|gb|GL892087.1| GENE 172 195040 - 195891 995 283 aa, chain + ## HITS:1 COG:VCA1049 KEGG:ns NR:ns ## COG: VCA1049 COG0491 # Protein_GI_number: 15601800 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Vibrio cholerae # 1 283 9 292 292 286 51.0 4e-77 MTIARLALLTTLFTPAVFAAPLTIDTYNPQEKGIFAVSSTLVSGPKEAVLFDAQFSVKDG EALVEKIRHSGKTLNKIVITSGDPDFYFGLQPLVKAFPNAKVVATQQVVDHIRATKDAKL AFWGPQMKDGAPTQLYVPQVLASTTFMIDGERVNIEEPESYAAYVWIPSAKTILGGTGVS WGIHVWTADTQTPKSRKQWQQTLDSMAALKPERVIPGHYLGTPPAGTGAIDFTRRYLQQF ELALTSHKASTDVINTMKKQWPNLAEVSSLELSAKVNTGEMKW >gi|333596725|gb|GL892087.1| GENE 173 195943 - 196464 410 173 aa, chain + ## HITS:1 COG:SMa1431 KEGG:ns NR:ns ## COG: SMa1431 COG0346 # Protein_GI_number: 16263235 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Sinorhizobium meliloti # 5 173 3 168 172 84 33.0 1e-16 MQSSVRGIDHIGITVPDIEKATLFFERAFGAQVLYHSVDAESDNIDQTAQQHTLKLLPGT KIHAIRMLAMPHGPGIELFEMHGPEQGMPARASDFGLQHFAVYVDDFDKAIAAFTAAGGE MFTEPKPLAFPDEQGEGNAFCYGQTPWGSIVELISWPTPMPYEKTTNLRRWKP >gi|333596725|gb|GL892087.1| GENE 174 196606 - 196821 179 71 aa, chain + ## HITS:1 COG:no KEGG:ECL_01912 NR:ns ## KEGG: ECL_01912 # Name: not_defined # Def: biofilm-dependent modulation protein # Organism: E.cloacae # Pathway: not_defined # 1 71 1 71 71 122 94.0 6e-27 MFTYYPAHTTAAQPELVNAIAQGLQAEHGVVTEDDILMELTKWVESTDNDILSDIYQQTI NYVVSGQNAPL >gi|333596725|gb|GL892087.1| GENE 175 196917 - 197054 183 45 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146311699|ref|YP_001176773.1| 30S ribosomal subunit S22 [Enterobacter sp. 638] # 1 45 1 45 45 75 80 1e-11 MKSNRQARHILGLNYKLSNQRKVVIEEGSEKQVTHATGRKRQADK >gi|333596725|gb|GL892087.1| GENE 176 197231 - 198928 2272 565 aa, chain + ## HITS:1 COG:sfcA KEGG:ns NR:ns ## COG: sfcA COG0281 # Protein_GI_number: 16129438 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 565 10 574 574 1067 92.0 0 MDNKLKKHRSLYIPYAGPVLLEFPLLNKGSAFSMEERSSFNLLGLLPEVVETIEEQAERA WIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYR RSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT ACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYQFVDDFIQAVKHRWPD VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSYQKIVF LGAGSAGCGIAEQIIAQTQREGLSEELARSRVFMVDRFGLLTDGMPNLLPFQTKLVQKRE NLKNWDTDNEVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCERPIVMPLSNPT SRVEATPQDIIAWTEGKALVATGSPFDPVLWKDKLYPIAQCNNSYIFPGIGLGVIASGAS RITDEMLMSASETLAGHSPLVNNGEGLVLPELKDIHKVSRAIAFAVGKMAQQQGVAVKTS ADALQQAIDDNFWMPEYRSYRRTSI >gi|333596725|gb|GL892087.1| GENE 177 199316 - 201025 1701 569 aa, chain + ## HITS:1 COG:AGc1553 KEGG:ns NR:ns ## COG: AGc1553 COG0488 # Protein_GI_number: 15888191 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 499 17 501 504 254 36.0 3e-67 MSTLLTAHSLRVDTAFGTLFDSLSFTLKKGDRIGLLGDNGCGKSTLLKILDGTQSPAAGT VSLAGHCLLARVEQHLPETLYPLTMLDAVLAQLPLAERDSLRWKAETLLAGMGFTVQETL LQSATLSGGQHTRLLLARALINDPDLLLLDEPSNHLDLPTLLWLEQFLQNWSGSFVLVSH DRQLLDAVTNGSWFLRDKTLHAFALPCTAARQALDAKDESDALRHKAEQKEIDRVTASAR RLATWGKVYDNEDLSRKAKQMEKQVERLKESQTELTAGSQWTLTLRGDALRADRLLEMTH LGVPPAPGLPDLFTLDSARLKSGDRVAIVGRNGCGKSSLLRLIWRHFRDEIADDRLKRHP RVSPGYYDQTLHQLPDDAALLDALEPFAPDPQTRKMALISAGFPWARHGQKVSTLSGGER SRLLFVGLTLARYSLLMLDEPTNHLDMEGKEALAETLQQFEGGVLLVSHDRQLIRQSCNR FWLIEDGRLSEWHDAEAMFERLREGTGPVVPEASKAASTPPSAASDDLLERLVALETLLE EDLARKPKHQKPQLQAQWRKEIEVIEAQL >gi|333596725|gb|GL892087.1| GENE 178 201222 - 202232 1101 336 aa, chain + ## HITS:1 COG:STM1567 KEGG:ns NR:ns ## COG: STM1567 COG1064 # Protein_GI_number: 16764911 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 335 1 335 336 562 91.0 1e-160 MKAAVVTQDHQVNVTEKTLRALKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEG IGIVKEIGPGVTSLKVGDRASVAWFFEGCGHCEYCNTGNETLCRDVKNAGYSVDGGMAEE CIVTADYAVKVPDGLDSAAASSITCAGVTTYKAVKVSDIKPGQWIAIYGLGGLGNLALQY AKNVFNAKVIAIDVNDEQLKLAASMGADLTVNSRSEDAAKVIQEKTGGAHAAVVTAVAKA AFNSAVDAVRAGGRVVAVGLPPEAMSLDIPRLVLDGIQVVGSLVGTRQDLLEAFQFAAEG KVKPKVTMRPLEDINAIFKEMEQGQIRGRMVIDLRS >gi|333596725|gb|GL892087.1| GENE 179 202280 - 203455 1177 391 aa, chain - ## HITS:1 COG:ECs0446 KEGG:ns NR:ns ## COG: ECs0446 COG2814 # Protein_GI_number: 15829700 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 1 376 1 376 394 469 74.0 1e-132 MKKTIFSLALGTFGLGMAEFGIMGVLTELAHDTGISIPSAGNMISFYAFGVVIGAPIVAL FSSKFSLKTTLLFLVAMCVVGNALFTFSDSYVGLAAGRLISGFPHGAIFGVGAIILSKIA PPGKVTVAVAGMIAGMTVANLLGVPLGTWLGHEFNWRYTFFLIAVFDALVILSVLLWVPD IRDTTTTRLAEQFHFLKKPEPWLIFAATMFGNAGVFAWFSFVKPFMVNVSGFSEGVMTAI MMLMGLGMVLGNVFSGKLSSRFSPLRIAATTDLVIVASLLALFAFGELKTASLVMGFVCC AGLFALSAPLQILLLQNAKGGEMLGAAGGQMAFNLGSAIGAYFGGLMITLGFSWSYVTLP AAILSFSAMTSLLMYGYLCAKKRQANARALA >gi|333596725|gb|GL892087.1| GENE 180 203617 - 204432 788 271 aa, chain + ## HITS:1 COG:VC0728 KEGG:ns NR:ns ## COG: VC0728 COG2326 # Protein_GI_number: 15640747 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 16 271 2 258 258 284 56.0 1e-76 MVSKKKTRVDDVAKNAPLKTKAYEEELRRLHVELVKLQQWVVAKGLKVCIVFEGRDGAGK GGTIKAITERVSPRVFRVVALPAPTDKEKSQLYFQRYVSHLPSAGEIVIFDRSWYNRAGV EKVMGFCTEEQVEKFLDGTPVMEKAMVDAGIILLKYWLEVTPKEQERRLRDRINDGRKIW KLSPMDIKSFNLWDEYTLARDAMFKATDTAWAPWFVARSEDKKRVRLNIISHLLSQIPYK EIHVDKVDLPKRKIGKVKPTKYPFRYVAERF >gi|333596725|gb|GL892087.1| GENE 181 204936 - 205592 902 218 aa, chain - ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 218 1 218 218 382 88.0 1e-106 MSKSKMIVRTKFVDRACHWTVVICFFLVAVSGISFFFPTLQWLTETFGTPQMGRILHPFF GVLIFVVLMFMFVRFVHHNIPDKQDIPWLKGIVEVLKGNEHKVAKVGKYNAGQKMMFWTI MSMIFVLLVTGVIIWRPYFAQYFPIQVVRYALLIHATSAIILIHAILIHMYMAFWVKGSI KGMIEGKVSRRWAQKHHPRWYRDVERLEAQKESSEGLK >gi|333596725|gb|GL892087.1| GENE 182 205585 - 206469 1058 294 aa, chain - ## HITS:1 COG:STM1569 KEGG:ns NR:ns ## COG: STM1569 COG0437 # Protein_GI_number: 16764913 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 571 91.0 1e-163 MAMETQDIIKRSATNPITPAPRARDYKAEVAKLIDVSSCVGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKTWTVMRFSETDQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQ YANGIVDFQQDNCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGSKKEMLEVAQQRVDKLKARGYDKAGIYNPQGVGGTHVMYVLHHNDQPELYHNL PKDPAIDTSINLWKGALKPLSAAGFIATFAGLIYHYIGIGPNKEVDDDEEEHHE >gi|333596725|gb|GL892087.1| GENE 183 206481 - 208892 3009 803 aa, chain - ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 803 213 1015 1015 1548 91.0 0 MTNHWVDIKNANVVVVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLLYLIENNKINAEYVKHYTNAGLLVREDFAFEDGLFSGYDAGKRQ YDKSSWNYQFDENGYAKRDDTLTDPRCVWNLLKQHVSRYTPDVVENICGTPKADFLKVCE VLASTSAADRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSEKQTDWQSWLDANTPKATRPDQVNYWSNYPKFAVSLMKSF YGDAAQKENDWGFEWLPKWDQAYDVIKYFNMMDKGAVTGYICQGFNPVASFPDKNKVVRS LSKLKYMVVIDPLVTETSTFWQNHGESNDVDPTAIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGQDAPGEARNDGEILAGIYHRLREMYRTEGGKGAEPLLKMSWNYKQPDHPESEE VAKENNGVALADLYDANGNLVAKKGQLLNSFALLRDDGTTASSCWIYTGSWTEQGNQMAN RDNADPSGLGNTLGWAWAWPLNRRVLYNRASADVNGKPWDPKRMLIEWNGSKWTGNDIPD FNTAPPGSNTGPFIMQPEGLGRLFAIDKLAEGPFPEHYEPMETPLGTNPLHPNVVSSPVV RIYEEDVLRLGKKDKFPYVGTTYRLTEHFHTWTKHARLNAIAQPEQFVEISETLAKAKGI ANGDRVKVSSKRGFIRAVAVVTRRLQTLNVHGQQVETVGIPLHWGFEGVAQKGYIANTLT PNVGDSNSQTPEYKAFLVNIEKA >gi|333596725|gb|GL892087.1| GENE 184 208941 - 209528 630 195 aa, chain - ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 195 1 195 1015 398 95.0 1e-111 MDVSRRQFFKICAGGMAGTTAAMLGFAPKMALAQARNYKLLRAKEIRNTCTYCSVGCGLL MYSLGDGAKNAKEAIYHIEGDPDHPVSRGALCPKGAGLLDYVHSENRLRYPEYRAPGSDK WQRISWDEAFSRIAKLMKADRDANFIEKNEQGVTVNRWTSTGMLCASAASNETGMLTQKF VRSLGMLAVDNQARV >gi|333596725|gb|GL892087.1| GENE 185 209749 - 210627 802 292 aa, chain + ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 292 1 292 293 388 73.0 1e-108 MDRKRATLIGLAAILLWSTMVGLIRSVSEGLGPVGGAAMIYTVSGLLCLVTVGFPDLRRF STRYLIAGSILFVSYEMCLALSLGYAATRSQAIEVGMVNYLWPSLTIAFAILFNGQKSTL WVIPGLLVSLLGVCWVLGGENGLHLNDIMQNVVSSPLSYGLAFAGAFIWAAYCTVTSKYA KGQNGITLFVLLTALSLWVKYAVSDQPEMVFSVPVVVKLLMCGVALGFGYAAWNIGILHG NVTVLAAVSYFTPVLSAALAAFLLSSPLSFSFWQGALMVCAGSLLCWYATRK >gi|333596725|gb|GL892087.1| GENE 186 211253 - 212326 1360 357 aa, chain + ## HITS:1 COG:STM1572 KEGG:ns NR:ns ## COG: STM1572 COG3203 # Protein_GI_number: 16764916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 357 1 362 362 539 84.0 1e-153 MKLKLVAVAVTSMLAAGVVNAAEVFNKDGNKLDLYGKVTGLHYFSDDAGSDGDKTYVRLG FKGETQINDQLTGYGQWEYEFKGNRSENQGADGNKTRLAFAGLKFDEFGSFDYGRNYGVA YDIGAWTDVLPEFGGDTWTQTDGFMTGRTTGVATYRNTDFFGLVDGLNVAAQYQGKNDRD DITESNGDGWGLSSTYEFDGFGVGATYAKSDRTDRQVRAASNLNAGGENAEVWAAGLKYD ANNIYLATTYSETRNMTAFGNGHVANKAQNFEVVAQYQFDFGLRPSIAYLKSKGKDIGSY GDQDLVEYVDVGASYYFNKNMSTYVDYKINLVDDSQFTKDAKVATDNIVAVGLTYQF >gi|333596725|gb|GL892087.1| GENE 187 212370 - 213860 1764 496 aa, chain - ## HITS:1 COG:STM1574 KEGG:ns NR:ns ## COG: STM1574 COG0477 # Protein_GI_number: 16764918 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 495 1 495 495 592 79.0 1e-169 MFRQWLALVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLP MGALGDRIGFKRLLMIGSVLFGLSSLAAAFAPSAGWLIAARASLAIGAAMIIPATLAGIR TLFNDARHRNIALGVWAAVGSGGAAFGPLIGGMLLEHFYWGSVFLINVPIVLIVVSLAAR FVPAQQGRPEQPLNISHAIMLIVAILLLVYSAKTALKGVLSPWMVACTLLTGAVMLFIFV RIQLRARVPMIDMRLFCHRIILSGVVMAMTAMIALVGFELLMAQELQFVHGFTPFEAGIF MLPVMVASGFSGPIAGVLVGRLGLRIVAAGGMGLSAVSFIGLSTLDFSTQQWQAWSLMVL LGFSAASALLASTSAIMAAAPKEKAAAAGAIETMSYELGAGLGIAIFGLLLTRSFSASIE LPQGLSASLTDKASSSIGEAMKVAQELTPSLAEPVIMAAKTAFITSHSVALSSAGGMLLI LAVGIWFSLAKVGQQQ >gi|333596725|gb|GL892087.1| GENE 188 213977 - 214552 633 191 aa, chain + ## HITS:1 COG:STM1575 KEGG:ns NR:ns ## COG: STM1575 COG1309 # Protein_GI_number: 16764919 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 191 1 191 192 265 71.0 3e-71 MRYLSKDERREEILQAAMRVALTEGLAAMTVRRIAAEAGVATGQVHHHFASAGELKSLAF VRLIRDLLDAEIVGDNAGWRERLHAMLGSDDGGFEPYIRLWREAQILASRDSDIKGAYVL TMEMWHQETVAIIRAGAEANAFTLADQPENIAWRLIGLVCGLDGIYVLNMPEMDDAAFNK HLDKLISLELF >gi|333596725|gb|GL892087.1| GENE 189 214762 - 216147 1336 461 aa, chain + ## HITS:1 COG:ECs2072 KEGG:ns NR:ns ## COG: ECs2072 COG2223 # Protein_GI_number: 15831326 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli O157:H7 # 1 461 1 462 462 661 83.0 0 MSHQSEKSNQHLLSNWKPENAQFWENKGKHIARRNLWISVACLLLAFCVWMLFSAIAVNL NKVGFNFSTDQLFMLTALPSLSGAILRVPYSFMVPIFGGRYWTVLSTVILVVPCVWLGIA IQNTATPYWVFIIIALLCGFAGANFASSMGNISFFFPKARQGSALGINGGLGNLGVSVMQ LVAPLVIFLPMFTFLGVHGVPQEDGSTMWLANAAWIWAPLLILATIAAFFGMNDIASSKA SIASQLRVLKRFHLWLLSLLYLATFGSFIGFSAGFAMLSKTQFPDVNILHLAFFGPLIGA LARSAGGMISDRLGGVRVTLINFVFMAIFSALIFLTLPGSGSGSFMAFYLVFMGLFLTAG LGSGSTFQMIAVIFRQITLDRVKKQGGSDEQAQHEAVTETAAALGFISAIGAVGGFFIPK AFGTSLAMTGSPVGAMKVFLVFYIVCVLVTWLVYGRKSSQK >gi|333596725|gb|GL892087.1| GENE 190 216215 - 219955 4445 1246 aa, chain + ## HITS:1 COG:STM1577 KEGG:ns NR:ns ## COG: STM1577 COG5013 # Protein_GI_number: 16764921 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Salmonella typhimurium LT2 # 1 1246 1 1246 1246 2397 90.0 0 MSKLLDRFRYFKTKGDSFAEGHGQVYHTNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLVRRRLIE LWREALAQHTDPVLAWDAIQNDPQKAQSYRKARGKGGFIRSNWKELNQLIAAANVWTIKH YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDFSEVAKLSDQWLAPKQ GTDSALAMAMGHVILKEFHLDNPSEYFLNYCRRYTDMPMLVLLDEQADGRVVPGRMLRAS DLADGLGETNNPEWKTIAFDVAGNLVAPNGSIGFRWGEKGKWNLESLAAGQETELTLSLL ITHDSVADVAFPYFGGNENPHFRSVNQEPVLTRRVPSKTLTLADGSQRRVVSVYDLVLAN YGLDRGLEDSNAALNYAEIKAYTPAWGEQITGVPAYLIEKIAREFADTAHKTHGRSMIIL GAGVNHWYHMDMNYRGMINMLVFCGCVGQSGGGWSHYVGQEKLRPQTGWLPLAFALDWNR PPRQMNSTSYFYNHASQWRYEKLTAQELLSPLADATKFTGHLIDFNVRAERMGWLPSAPQ LNLNPLHVKARADAAGMSPQDYTVQALKSGDIRFACEQPDNGKNHPRNLFVWRSNLLGSS GKGHEYMLKYLLGTESGIQGEDLGSTDDVKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCL FSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKVFSEVCVGH LGTETDVVLQPLQHDSPGELSQPFDILDWRKGECDLIPGKTAPNIAVVERNYPETYERFT ALGPLLDKLGNGGKGISWNTQNEVDFLGKLNYVKLDGPAKGRPRIETAIDASEVILALAP ETNGQVAVKAWEALGELTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLESEHV SYNAGYTNVHELIPWRTISGRQQLYQDHVWMRAFGESLVAYRPPIDTRSVTHMREIPPNG FPEKALNFLTPHQKWGIHSTYSENLLMQTLSRGGPIVWISETDARELGIEDNDWIEAFNA NGALTARAVVSQRVPPGMTMMYHAQERILNIPGSEVTGRRGGIHNSVTRVCPKPTHMIGG YAQLAYSFNYYGTVGSNRDEFIMIRKMKNINWLDGEGRDQVQEAKK >gi|333596725|gb|GL892087.1| GENE 191 219952 - 221496 1818 514 aa, chain + ## HITS:1 COG:STM1578 KEGG:ns NR:ns ## COG: STM1578 COG1140 # Protein_GI_number: 16764922 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Salmonella typhimurium LT2 # 1 514 1 514 514 1047 93.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDED EWQGGWIRGIHGKLTPRLGGKMGVLSKIFANPVLPQIDDYYEPFTFDYQDLHRAPEGDHL PTARPRSLIDGKRMDKIVWGPNWEELLGGEFEKRARDRNFQKIQKEMYGQFENTFMMYLP RLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKS EKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEHETDLYERQCDVFL NPNDPAVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSYADAGGLPQSDGVLPAVESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYKRSQT VEGVTDTRAIEEVGLTEAQVEEMYRYLAIANYEDRFVIPTSHREMARDAFPEKNGCGFTF GDGCHGSDTKFNLFNSSRIDAINITEVRDHGEGE >gi|333596725|gb|GL892087.1| GENE 192 221496 - 222191 920 231 aa, chain + ## HITS:1 COG:STM1579 KEGG:ns NR:ns ## COG: STM1579 COG2180 # Protein_GI_number: 16764923 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 357 79.0 1e-98 MQILKIIALLIEYPDELLWENRDEALSLVEQDAPMLLPFAQQHLSAPLLDKQAEWCEVFE RGRATSLLLFEHVHAESRDRGQAMVDLMSQYEKAGLQLDCRELPDYLPLYLEYLSIVTDD EAREGLQNVAPILALIGGRLKQRGVAHYQLFDALLTLAETRLSSDSVAKQVSGEKRDDTR QALDAVWEEEQVKFIEDNATSCDSSPMQQYQRRFSQDVAPQYVDVSAGGPK >gi|333596725|gb|GL892087.1| GENE 193 222188 - 222868 619 226 aa, chain + ## HITS:1 COG:STM1580 KEGG:ns NR:ns ## COG: STM1580 COG2181 # Protein_GI_number: 16764924 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Salmonella typhimurium LT2 # 1 226 1 226 226 385 89.0 1e-107 MTHYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLSKRGMNWASNLFHIGI LGIFFGHLFGMLTPHWMYAWFLPVAVKQQLAMIAGGICGVLTLIGGSMLLYRRLFNQRVR ATSTTPDIIIMSILLLQCILGLSTIPFSAQYPDGSEMMKLVGWAQGIVTFKGGSSEMLSG VAPIFRVHLVLGMTIFLIFPFTRLVHVWSAPFEYFTRRYQVVRSRR >gi|333596725|gb|GL892087.1| GENE 194 222949 - 223794 750 281 aa, chain - ## HITS:1 COG:nhoA KEGG:ns NR:ns ## COG: nhoA COG2162 # Protein_GI_number: 16129422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Arylamine N-acetyltransferase # Organism: Escherichia coli K12 # 1 281 1 281 281 424 73.0 1e-119 MSPFLSAYFARTGWQQPVQVDIDTLRGLHLHHNCAIPFENIDVVLPREIHLDDGCLVDKL VTARRGGYCFEQNGLFERVLREVGFTVRSVLGRVVLANPTQMPPRTHRLLLVELNGERWI ADVGFGGQTLTAPIRLIANEEQETPHGSYRLLSEGNDWVLQFRHHEHWQSMYHFDLATQY FNDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFNFTHWQNGHVEDQIHLPDAE ALYKLMQARFGLGVDDPKHGFTLAELTAVMAGFDTHPQAGK >gi|333596725|gb|GL892087.1| GENE 195 223900 - 224472 615 190 aa, chain + ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 1 188 17 204 205 330 82.0 7e-91 MNHFRPVELRHASRLLNHGPTVLITSRDETIDRRNVMAAAWSMPVEFEPPRIAIVVDKSA WSRELIERSGKFGIVIPGVAAANWTWAVGSVSGRDEDKFNCYGIPVIYGPKLGLPVIEEK CLAWMECRLLPVTSAAEKYDTLFGEVVSAAADERAFVAGRWQFDGDKLNTLHHLGAGTFV ASGKMVKALE >gi|333596725|gb|GL892087.1| GENE 196 224754 - 224954 135 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|288549663|ref|ZP_05967758.2| ## NR: gi|288549663|ref|ZP_05967758.2| conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] # 1 66 1 66 66 65 54.0 2e-09 MPEQFVMRLYVAVSLPRIHGALHKIADPLLTIVYTNVTAIMTNYILDNCDVTSMGLIIYQ VKACID >gi|333596725|gb|GL892087.1| GENE 197 224960 - 225385 225 141 aa, chain + ## HITS:1 COG:no KEGG:CKO_01383 NR:ns ## KEGG: CKO_01383 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 22 136 59 173 186 134 51.0 1e-30 MKPLYFLLFALSPLAAAENIYAPGQAALKFNQWYIAQLDQNKPPVLNPDIMNEYVASGTI AAIKEMYSGDSNGKDMPDADMFIKAQDWDDDWNQVTVLHSDFDAVCTNVYVAFGKKQDHV IADCLVEEQGKWKVRSATLIK >gi|333596725|gb|GL892087.1| GENE 198 225453 - 227555 2511 700 aa, chain - ## HITS:1 COG:RSc3022 KEGG:ns NR:ns ## COG: RSc3022 COG0480 # Protein_GI_number: 17547741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Ralstonia solanacearum # 1 697 1 700 703 1021 71.0 0 MPRPIPLERYRNIGISAHIDAGKTTTTERILFYTGMSHKLGEVHDGAATTDWMAQEQERG ITITSAAVSCFWPGMDRGFEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYDSVGGVQ PQSETVWRQANKYHVPRLAFVNKMDRPGADFFRVVQMMQERLKANPVPIVIPVGAEEHFT GVVDLIKMRTILWDDATQGMAFSYAPVPDDLLSTAQAWREKMVSAAAEASEELMDKYLET GELDEAEIIKGLRIRTISGEIQPMLCGSAFKNKGVQRMLDAVIELMPSPLDVPAIDGVDE DGQHAERHPSDHEPFSALAFKLMSDPYVGQLTFIRVYSGILRKGDAVYNPVKGKKERIGR IVLMHANDRHEVDELRAGDIAACVGLKDVTTGDTLTDPNAVITLERMEFPDPVISLAIEP KTKADQEKMGIALQRLAAEDPSFRLHTDDESGQTIISGMGELHLEIIVDRMKREFGVEAN IGRPQVTYRETLRKAVKDIEGKFVRQSGGKGQYGHVVLSLEPLAAGSGFVFEDATKGGVV PREYIPSVEKGLREAMNTGVLAGYPVVDVKATLTFGSYHDVDSSEMAFRMAAILGFKEGA RRADPVILEPVMHVEVETPEEYAGNIMGDLSSRRGLVQGMAEQYGSQIIRADVPLAEMFG YATTLRSMSQGRATYTMEFHHFAEAPRNVADEIIAKRVKS >gi|333596725|gb|GL892087.1| GENE 199 227717 - 228016 214 99 aa, chain + ## HITS:1 COG:BS_yczG KEGG:ns NR:ns ## COG: BS_yczG COG0640 # Protein_GI_number: 16077456 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 2 96 3 97 104 92 46.0 3e-19 MIPNHPEPEQIVLENVLFALGNPLRLAIIRRLADGSELSCNALRPEEVVKSTMTHHWRVL RDSGVIWQRPQGRENMISLRREDLDARFPGLMAILLQAK >gi|333596725|gb|GL892087.1| GENE 200 228009 - 228650 454 213 aa, chain - ## HITS:1 COG:no KEGG:ECL_01884 NR:ns ## KEGG: ECL_01884 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 210 1 210 210 339 83.0 5e-92 MTGRVDYHLEKYLLTEADEPERLTRQWAEVMRECHDQKSGAEERLRLALLNVDYVTSFEL PFRLLLTRAPQLIDSIRNEFQLSQKNVLFNGKRFGCVYSLKRDLNGIPDEFTYHLKTRIQ RIDASGGSEVPYRQIAQQVKAPRERLQLALEQGLAVTALDGLFWFGLQRIAAEVQRLRKT GMRIVTSDTEVFDTLTGTTRRVPVYRLEDAAAT >gi|333596725|gb|GL892087.1| GENE 201 228742 - 229743 855 333 aa, chain - ## HITS:1 COG:STM1155 KEGG:ns NR:ns ## COG: STM1155 COG1560 # Protein_GI_number: 16764511 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Salmonella typhimurium LT2 # 1 307 1 306 306 416 63.0 1e-116 MTKLPQFSLAFIHPRYWLSWAGIAALWCTVQLPYPLLLKTGHGLGRLAMRLLPRRVEIAR RNLELCFPDMKEDERERLLERNFESVGMGVIETGIAWFWPDWRVRKHFSVTGYEHMEQAR AQGRGVVLIGMHFLTLELGARIFGMLNAGIGVYRPNNNALLDWLQTRGRLRSNKTMLDRY DLKGMIRALKQNEILWYAPDHDYGKTNSVFVPFFAVPDAATTAGSYMLVKSARPAVIPFV PRRKADGTGYELIILEDISDTLQGGDKASVATQMNRAIERAVMMAPEQYMWLHRRFKTRP EGQPDRYKRKKQIPSSARTFSASDISDRSSIQQ >gi|333596725|gb|GL892087.1| GENE 202 229930 - 230160 349 76 aa, chain - ## HITS:1 COG:ZydcE KEGG:ns NR:ns ## COG: ZydcE COG1942 # Protein_GI_number: 15801678 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Escherichia coli O157:H7 EDL933 # 1 76 14 88 88 102 65.0 1e-22 MPHVDIKCFPRDLTDEQKTALAADIAEAIARHLNSKDRSISVALQEVQEADWKAQVWDTE IGPKLDELIKKPGYSM >gi|333596725|gb|GL892087.1| GENE 203 230198 - 230815 786 205 aa, chain - ## HITS:1 COG:yncG KEGG:ns NR:ns ## COG: yncG COG0625 # Protein_GI_number: 16129413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 205 1 205 205 328 76.0 5e-90 MIKLYGVPGWGSAISEVMLTLADIPYQFVNVDGFDQPGPQRELLLKLNPLCQVPTLELEN GAIVTETAAIALMVLDRRPDLAPPVGQAERQQFQRLLIWFVANVYPTFTYADYPERWVPD APEQLKKNCIEYRKSLYLWFDSQLSASPFAFGKQLTLLDVYIAVARTWGPRHEWFATNTP NITAVADAVCALPELHKVLKANDII >gi|333596725|gb|GL892087.1| GENE 204 230857 - 231744 983 295 aa, chain - ## HITS:1 COG:AGl2811 KEGG:ns NR:ns ## COG: AGl2811 COG0834 # Protein_GI_number: 15891517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 293 47 309 312 227 48.0 2e-59 MKYGLLAGLVFTTASYASIDLKANEQPLPVTVDQQAVAKIPANYKFVEPGTLTVAISALN SPPLALLASDNRTRIGSDPDIARLLAGSLGLKLKLVPTAWEDWPLGITSGRYDVALVNIA VTEQRKAKFDFATYRVDSLAFSVKSTSNVQSITRAKDLAGKKVIVGSGTNQERILLGWNE ENKKAGREPALPVYLTDDASGNLYIQSGRADVFFGPQSVSAYKAALTGKTRVVGLGPKKA YVATTTKKGNGLVYALQAALDGAIKRGDYQKVLARWGEAGEAVTSSDVNPPGITY >gi|333596725|gb|GL892087.1| GENE 205 231754 - 232527 259 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 241 1 228 309 104 29 2e-20 MQASPEGHISITGVSKFFGRHKALDNVTLEIPPGSVTVILGPSGSGKSTLLRTINHLERV DEGFIQIDGDYIGYRRQGDKLYELKEKQILKQRVNVGYVFQNFNLFPHLTVLENLIEAPI AHKKFSKKEAVENAYSLLDVVGLRDKADAWSRHLSGGQQQRIAIARALALRPRVMLFDEP TSALDPELVGEVLDVIKKLARSGTTLVVVTHEIGFAREVADKVVFMVDGKIVEQGSSDDV LNRPSHPRTRQFLSKVL >gi|333596725|gb|GL892087.1| GENE 206 232511 - 233437 1163 308 aa, chain - ## HITS:1 COG:AGl2810_1 KEGG:ns NR:ns ## COG: AGl2810_1 COG0765 # Protein_GI_number: 15891516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 269 16 283 283 266 58.0 4e-71 MSNVETIKVVPARYPLRAAGAVVALFVLAVVIQSVAFNPRWEWAVFARWFFDPVILEGVG QTLLLTLIATVLSVVTGGMLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYL YDTLSLGVPFTGITWGSFDTINVLGQFSTAIVGLTLVQSAYTAEIIRGGFLGVDHGQYEA AAALGLPAWRRTVRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNR TQEVIPLLMVGAVWYLVITTVLSAIQHVIERGLARSERRSAVNHNRAASRARSVTTSPAQ EPVHASLS >gi|333596725|gb|GL892087.1| GENE 207 233447 - 233956 643 169 aa, chain - ## HITS:1 COG:AGl2808 KEGG:ns NR:ns ## COG: AGl2808 COG0454 # Protein_GI_number: 15891515 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 157 1 162 181 125 45.0 4e-29 MREQFRDVSPEDADLQPIIEGLFGEYAARYGDYFSKDAEVELTEWYLAPQGLFIVLERDG EILATGAYKPFDERTAEIKRIWTDKTLRQQGLAARVVQELERRAVLAGYSHIYLTTGFRQ PEAVRLYLSQGYQPQFDLNRDPEEYSQPPFDGRLRFTKTLIREALSKTA >gi|333596725|gb|GL892087.1| GENE 208 233966 - 234898 1426 310 aa, chain - ## HITS:1 COG:AGl2811 KEGG:ns NR:ns ## COG: AGl2811 COG0834 # Protein_GI_number: 15891517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 308 21 309 312 267 50.0 2e-71 MQKSSLILALALAFTPAVWAENVNINGTGVSIEANKTPINTAKNSDAIAQLPKDYHFAVP GKFTVAVAGLNQPPLTVFSDDNKTLLGSEVDIARLVADSLGLELNVVPTSWEDWPLGVAS GKYDAAISNITVTKARKEKFDFATYRKDSLGFYVKSTSPIASLQKAEDIAGLRIIVGSGT NQEAILLAWNEENLKKGLKPFTPIYTKDDAAQTLAIQSGRADAYFGPNVIGAWKAALNGK TKLVGSVDGGWPKAAHIAVTLKKGSGLVEPVQTALNGVIKNGDYDKVLNRWGEGVERIPH SDVNPAGLGD >gi|333596725|gb|GL892087.1| GENE 209 234913 - 236229 1127 438 aa, chain - ## HITS:1 COG:AGl2804 KEGG:ns NR:ns ## COG: AGl2804 COG2141 # Protein_GI_number: 15891513 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 428 11 434 453 540 62.0 1e-153 MSAYRQLRLGTILHGASGNMSAWRHPAAVADASINFDFVKETALKAEAGKLDFIFVADGL YINEKSIPHFLNRFEPLTVLSALASITSHLGLVGTLSTSYSEPFTVARQFASLDHLSNGR AGWNVVTSPLEGSAKNFSREKHPEHALRYRIADEYLDVVKGLWDSWEEDAFIRNKESGQF FDASKLHTLDHHGDFFQVSGPLNIGRTPQGRPIVFQAGASDDGKKLAVKHADAIFTHHDT LEDAQAFYRDVKQQLESHGRRAGDLHIFQGVSVIVGNNANDVEKQYQTTAALVSIADALN YLGRYFEHHDFSQYPLDAPFPDIGDLGQNSFRSTTDEIKRNARERNLTLRQVALEAASPR PRFSGTPEQVADGLQAWFEEKAADGFIIQGGTPDTFPRFVDQVVPVLQARGLFRTDYPGT TLRESLGLDEPKNQFTQQ >gi|333596725|gb|GL892087.1| GENE 210 236246 - 237367 1332 373 aa, chain - ## HITS:1 COG:BS_yxeP KEGG:ns NR:ns ## COG: BS_yxeP COG1473 # Protein_GI_number: 16080998 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Bacillus subtilis # 2 373 5 379 380 337 46.0 2e-92 MSFSEQLIAWRRELHQNPELSGQEVETTARLREWLTAAGIAPLDYDLKTGLVAEIGTGNA LVALRADIDALPIDERSGVPFSSRRAGVMHACGHDIHTSVILGAALKLKEREASLNGRVR ILFQPAEENFGGAKSMVRAGALRDVRAIFGMHNEPSLPVGEFATRGGPFYANVDRFVIHV TGKGAHAARPHEGNDAIVLASQLVTALQSVASRNVNTLDSVVLSVTRIAGGNTWNVLPES VELEGTLRTHRTEVQQNVKARVGEIAAGFASAFSAQINITWYAGPTALVNDEHWAGFATS VAREAGYETRHAELHMGGEDFAVYLQNIPGAFVSIGSNSPFGLHHPAFNPDEALIEPAAR YFAQLAEQALQHV >gi|333596725|gb|GL892087.1| GENE 211 237364 - 238365 1003 333 aa, chain - ## HITS:1 COG:AGl2803 KEGG:ns NR:ns ## COG: AGl2803 COG2141 # Protein_GI_number: 15891512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 329 4 333 335 288 50.0 1e-77 MSWRISILDKSPVAEHETAADALARTLTLAQQAETLGYHRFWIAEHHNTPQLASPSPELL IAWILGQTKRIRVGSGGVMLQHYSPYKVAENFNVLAALAPGRVDLGVGKAPGGLPLSTRA LQHGLEPQKKGSFAEQLTQLDRWIRPENQSAEEDVRATPLPPVPAHGFLLGASTESALLA ASLDWHFVFAAHLNGDPELLREVVTAWRQHSVREVIVAVQAIVAPTQAEADALAQKVEVW GVELANGQRVTVASEEQAYAFARQAGSKPVRIARRAQSLLAGTAASVLEQLNALHQQWGI EEFIIDTPVADGATRVQSLRLLAEARLNREVTV >gi|333596725|gb|GL892087.1| GENE 212 238475 - 238924 225 149 aa, chain - ## HITS:1 COG:PA4799 KEGG:ns NR:ns ## COG: PA4799 COG0563 # Protein_GI_number: 15599993 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Pseudomonas aeruginosa # 1 132 42 170 192 91 37.0 5e-19 MDRLYWRANWQGTPDEEFLAALEQTLAASPDWVLDGNYNRTRDVKWRDVDMVVWIDHGFI RTLWQAVTRAFKRAWHKQELWPGTGNRESFRQSFFSKDSIIIWTIKTWRSNRKRYEADMH NPQYAHIRFLRITRRHEAETLITSLQSRR >gi|333596725|gb|GL892087.1| GENE 213 239159 - 239509 68 116 aa, chain + ## HITS:1 COG:YPO2807 KEGG:ns NR:ns ## COG: YPO2807 COG0583 # Protein_GI_number: 16123005 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 36 116 216 296 297 110 61.0 5e-25 MAIWVNDLLSFMVVARERSLGYLSRRSVTRCAIWKRGRVDGQLILNSLPQRIDAAENGLG LAYVPEDSIFDALAEGRLVRVPEAWCPAFTGYHLFYPSRRQHTTAFAFLIAALRHS >gi|333596725|gb|GL892087.1| GENE 214 239838 - 241334 2025 498 aa, chain + ## HITS:1 COG:STM1584 KEGG:ns NR:ns ## COG: STM1584 COG1113 # Protein_GI_number: 16764928 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 487 1 487 497 822 91.0 0 MKTSNKSAADHHAAKRRWLNSHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG PALALVYLVCGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFVNWAM TGIVDITAVALYMHYWGAFGDVPQWVFALGTLAIVGTMNMIGVKWFAEMEFWFALVKVLA IVIFLVVGTVFLGTGKPLDGNATGFHLITDNGGFFPHGLLPALVLVQGVVFAFASIELVG TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGV PYVGSIMNIVVLTAALSSLNSGLYSTGRILRSMSMGGSAPKFMSKMSKQQVPYAGILATL VVYIFGVFLNYLVPSQVFEIVLNVAALGIIASWAFIVVCQMRLRKAIKEGKAADVSFKLP GAPVTSWLTLLFLLSVLVLMAFDYPNGTYTIATIPLLAVLLIAGWFGVRKRVNEIHSTAP VHPDDNKQDGPLVEETSR >gi|333596725|gb|GL892087.1| GENE 215 241427 - 242488 1405 353 aa, chain - ## HITS:1 COG:yncE KEGG:ns NR:ns ## COG: yncE COG3391 # Protein_GI_number: 16129411 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 353 1 353 353 521 81.0 1e-148 MSLRHLCSPRLRGSLLLGSLLFAGTFQVHAAEEMLRKAVGKGAYEMAVSQQENALWVATT QSRKTDKGGVVYRLDPVTLEVTQAIHNDLKPFGATIDKATQTLWFGNTVNSAVTAIDAKT GEVKGRLVLDDRKRSDTVKPLQPRQLVADDTTNTVYITGIGKESVIWVVDGATLKLKDTI ANTGTFSTGLALDAQAKRLYTTNADGELVTIDTATNKILSRKKVQDDGKEHFYLNLSLDT AGQRAFLTDSKQPEVLVVSLKDGSVMQKIAAPESLAVLFNPARNEAYVTHREAGKVSVID AKTYKVTKTYDTPVYPNSLALSADGKTLYVTVKQKSTRQQEATQPDDVIRIEL >gi|333596725|gb|GL892087.1| GENE 216 242505 - 242723 73 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRFTADITSGGQSHRFAVILMRIVIINGSNVEYFFPSNPYIHEMCGYSFHNIYKGFNIY TQVPVDLVRIFS >gi|333596725|gb|GL892087.1| GENE 217 242736 - 244853 2361 705 aa, chain + ## HITS:1 COG:STM1587 KEGG:ns NR:ns ## COG: STM1587 COG1629 # Protein_GI_number: 16764931 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Salmonella typhimurium LT2 # 1 705 1 706 706 1097 76.0 0 MKIITARRVSLPLLFVPVVFGPLSAMAADEQTLIVSATPQTVSELDTPAAVSVVSGDDMR HATPRINLSESLGSVPGLQIQNRQNYAQDLQLSVRGFGARSTFGVRGIRMYVDGIPATMP DGQGQTSNIDLNSIESVDVLRGPFSALYGNASGGVINIHTQTGQQPATIEASSYYGSYGT WRYGMKATGAVGDGTQAGDVDYAVSTTRFTTHGYRDHSGARKNLANAKLGVRIDDVSKLT LIFNSVDMKANDPGGLSYQEWQNNPRQSPRGDQYNTRKTIKQTQAGIRYDRQLSEQDDLS VMMYAGEREMTQYQSIPASTQRDNPAHSGGVIDMQRHYQGIDTRWTHRGELLVPVTFTTG LNYENMSENRRGYENFVVNNGVTDYGVKGDKRRDERNLMWNLDPYLQTQWQLTQKLSVEA GVRYSSVWFDSNDHYITPKNGDDSGDASYHKWLPAGAVKYAVTDAWNLYAAAGRGFETPT INELSYRSDGKGGLNINLQPSTNNTYEIGSKTRIGNGILTAALFRTDTDNEIVVDENKEG RTTYKNAGKTRRQGVEIALDQQFAENWKLKMAWTYLDATYRTNVCNNTDCSGNRMPGIAR NMGYASFGWEPEEGWYAGADARYMSDVMANDTNTAKAPSYTVVGLNTGYKLNYGKWGMDL FGRVDNLFDKEYAGSEIVNAGYNRYYEPAPGRNYGVGLSVSYRFE >gi|333596725|gb|GL892087.1| GENE 218 244985 - 245653 675 222 aa, chain - ## HITS:1 COG:STM1588 KEGG:ns NR:ns ## COG: STM1588 COG1802 # Protein_GI_number: 16764932 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 8 221 5 220 221 197 51.0 2e-50 MLDLEHLEKAQRISLTLQVENSLKGALITGSLKPGARLVTKEIADKLGTSITPVREALLR LVSAGALQATPAQAFLVPEVTLERYNEINAIRKQLEPMAVAAACQNMTETRLDALRALSD NFSTAMHQGDVQKAIYANRVFRFTLYQYAEMPTLNSLIEQLWVRIGPCINYLHEELKDIP ATTYHYADLLSALEQRDVTASREAIDRAIDEANILLQRQYYS >gi|333596725|gb|GL892087.1| GENE 219 245910 - 246944 1280 344 aa, chain - ## HITS:1 COG:STM1589 KEGG:ns NR:ns ## COG: STM1589 COG2130 # Protein_GI_number: 16764933 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 344 12 355 356 597 80.0 1e-170 MSQSTTQNRRWVLASRPHGAPVADNFRLEEQPIPTPSEGQVLLRTVWLSLDPYMRGRMSD APSYSPPVEIGAVMVGGTVSRVETSRHPDYKEGEWVLGYSGWQEYELSDGKGLVKLGENP SHPSWALGVLGMPGFTAYMGLLDIGQPQAGETLVVAAATGPVGATVGQIGKIKGCRVIGV AGGEEKCRHAVDVLGFDACLDHHADDFADQLAKACPQGIDVYYENVGGKVFDAVLPLLNT SARVPVCGLVSGYNATNLPEGPDRLPLLMGTILKKRIRMQGFIIAQDYGHRIDEFQQEMG RWVQEGKIHYREQVTEGLDAAPDALIGLLEGKNFGKVVIRVAAD >gi|333596725|gb|GL892087.1| GENE 220 247011 - 247586 398 191 aa, chain - ## HITS:1 COG:mll1444 KEGG:ns NR:ns ## COG: mll1444 COG1396 # Protein_GI_number: 13471465 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 171 1 171 187 201 56.0 7e-52 MNTMTDNMNQRISVRIRLERESRGWSLSELAERAGISRGMIHKIERGDSSPTATLLARLS GAFGISMSTLIARAEMQEGKLLRLANQPVWRDPQTHYLRRHVSPRTDMPIDLVQVELPAR SDVPMPASSYALARQLIWLQAGELVFLEGETRHEMKAGDCLELGPPNDCRFINETDEPCL YLVVRLNQSGS >gi|333596725|gb|GL892087.1| GENE 221 247734 - 248252 516 172 aa, chain + ## HITS:1 COG:yncA KEGG:ns NR:ns ## COG: yncA COG1247 # Protein_GI_number: 16129407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Escherichia coli K12 # 1 171 1 171 172 298 81.0 2e-81 MIVRHACKEDCAAIGEIYNHAVLHTAAIWNDTTVDTDNRIAWFEARTLLGYPVLVSEEEG VVTGYASFGDWRAFDGFRHTVEHSVYVHPDHQGKGIGRLLMTELIKEARQIGKHVMVAGI EAQNQASIHLHETLGFKTTGKMPQVGTKFGRWLDLTFMQLLLDERSEPDALS >gi|333596725|gb|GL892087.1| GENE 222 248249 - 248698 507 149 aa, chain + ## HITS:1 COG:ydcZ KEGG:ns NR:ns ## COG: ydcZ COG3238 # Protein_GI_number: 16129406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 1 149 149 196 86.0 1e-50 MNQSLTLAFLVAAGIGLVVQNTLMVRITQSSSTILIAMLLNSLVGIVLFVSILLVKNGLA GFNELASTVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGMVMDILKSN GVPLRALVGPVCGAVMLVVGAWLVARRQF >gi|333596725|gb|GL892087.1| GENE 223 248702 - 248935 279 77 aa, chain - ## HITS:1 COG:no KEGG:G2583_1807 NR:ns ## KEGG: G2583_1807 # Name: ydcY # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 77 1 77 77 99 85.0 6e-20 MSHLSDVIVRVDAAIEESVITHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGKQHK EEAEARHAHLTQGGTIL >gi|333596725|gb|GL892087.1| GENE 224 249010 - 250608 2027 532 aa, chain - ## HITS:1 COG:dppA KEGG:ns NR:ns ## COG: dppA COG0747 # Protein_GI_number: 16131416 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 3 523 8 525 535 588 55.0 1e-167 MSTGKTVLALALSALLPASAAWAANNDTIIYCSEASPESFNPQIASSGPSFVASSQTLYN RLINFDPVKNTPVPSLAESWTISPDGKTYTFTLRKGVKFNSNKYFKPTRDFNADDVIFSV MRQKDPKHPYHNVSQGNYEYFNDVGLDKLIQDVKKIDDYHVQFTLSEPNAAFLADWGMDF ASILSAEYADAMLKKGTPENVDTWPIGTGPYALQQYKVDSLIRYVANPNYWDGEVPTKHL IFSITPNVETRLAKLQTNECQIIPAPSPVQFDAIKKNKDLTLHSVEALNVGYLAFNTEKK PFDNVLVRQALNYATDKKAIVNAVFMGSGTVAKSPIPPNMLGFNKDLKDYGYDPEKAKAL LKQAGLEKGAEVTLWSMPVQRPYNPNSRRIAEMIQADWAKVGVKAKIVSYEWGEYLSGMR KGEHDSALFGWMSDNGDPDNFADVLLGCNSIKTGSNAARWCDKGYDERVQQAKLTSNPEE RAKLYGQAQEIFYQQAPWIALANGKTFYATRSNVTGYSVSLMGSDFSKAKLN >gi|333596725|gb|GL892087.1| GENE 225 250891 - 252222 1141 443 aa, chain + ## HITS:1 COG:no KEGG:ECL_01858 NR:ns ## KEGG: ECL_01858 # Name: not_defined # Def: ssrAB activated protein # Organism: E.cloacae # Pathway: not_defined # 1 442 1 447 448 623 82.0 1e-177 MAKTLLRSGNLDDFQAVGGGGQAVFESALQIREALRLRKQQAIVDCLAIPQVNDGGDRVD WYSPVEGTVSSWKAADEDDRFRALRYLENTLASVESLSKKCLQSPKTAQQLFGSLLSKSF QFPGENFVYLVDGKPVICFWGFVNLNESARDDVLDCLRESLIPDPEPVVINEPEPEPEPA PVVTFEQADAPLITPAATVRITEDELYTPEPVRMDVTPPEPAPAVVQKKRRSPLWLLPVA AVIIAAIATPLLWPKQAPTAAPAATPAPAPVAIAPAPVKTVEPLELKLPLHQAEVVEPKV KTPAPAAEPVVITAIPKDAMVMEANQVKAGLTRFLNGTWRAFLDVQDPLTGKPPSLRYQI QNNKGFARVVHGDNIVCRVDVFSGLHSNGELLIKTRGNARCSDGSRYPMPEVTCKAGASD VAECTARYDANTVVPLTFKKAGV >gi|333596725|gb|GL892087.1| GENE 226 252227 - 255208 3062 993 aa, chain + ## HITS:1 COG:STM1594 KEGG:ns NR:ns ## COG: STM1594 COG4457 # Protein_GI_number: 16764938 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative virulence factor # Organism: Salmonella typhimurium LT2 # 1 993 1 993 993 1786 85.0 0 MLVNLCDYKQSVTLIANSGVQFLDFGLTPQDTASNGRFVRKTANGPLLRLDFDLVNGRYT LPAINGGQPEVVKPESTIPLHDSLTVLDGVWLPLPFLRFNPPRTFVEGPDNWARVQVRKL STPDAAGNTHRVTVALDSQIAEHATSALSPVENDILNGTRFALAWRDSEIESFLDQTWID GWLREAFTQFADGVEKRSERELHQAMRSFEYQAHWLNLLSMLGEQLTVPEVKFVTHTLST PAIPVDLILDVGNTHTCGVIIEDHGDANDGLRQTAELQVRSLSEPQFLNEPLFTSRLEFS EARFGKQHFSVESGREDAFVWPSIVRVGDEARKLAMQRLGTEGNSGISSPRRYLWDETPV VQDWRFSQMNSKTQREPLATAFPLMNLMNDDGEPLFTLPQDERLPVFSPQYSRSTLMTHM LCELLAQALGQINSVATRLRLGFPASPRQLRTLILTLPSAMPKQEREIFRRRMFEAIAIV WKAMGWHPQDEDFASRKQQEKSVVPVPEIHMEWDEASCGQLVWLYNEAISHFGGQTEAFF ASLARPDRAPEPGVQPGRALRVASIDIGGGTTDMAITHYQLDDGSGNNVKITPQLLFREG FKVAGDDTLLDVIQRYVLPALQTHLQKSGIADAPQLMASLFGDSGRIDTQAILRQQTTLQ LFMPIGHAILAAWEASDIDDPLAGLHATFGDLLTQKPTRNVMNYLQQAIDHALPAGSENV DLFSVPLHVNFREMQDAMLAGQFTLAAPLHAVCEAISHYSCDILLITGRPGCLPGVQALI RHLQPVPVNRIVWLDKYQVHEWYPFSQQGRIGNPKSTAAVGAMLCSLALDLRLPRFNFKA ADIGAYSTVRYLGVLDNTINTLRDENVWYHDIDLDKPGAKLDARLHFPLRGNVTLGFRQL ANARWPATPLYTLSINSAELAKAIAGDGVLNVRLKLRGGNKQEGPESFELSDAWLQDGTP VPPDALTFKLNTLADRRHSGSHYWIDSGSVYLK >gi|333596725|gb|GL892087.1| GENE 227 255205 - 257379 1624 724 aa, chain + ## HITS:1 COG:STM1595 KEGG:ns NR:ns ## COG: STM1595 COG4458 # Protein_GI_number: 16764939 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative virulence factor # Organism: Salmonella typhimurium LT2 # 1 724 1 714 714 738 57.0 0 MTATTATTQALIGWINETRQHAPMLDNEADALLARLNAASAREEALDRALASPGSIGLYG HSQAAKAHLLAALCGSGDERLNVTPGQRTFDYFSHINPGHAPTNMAVRFSRASDEVADDT FPLRLRLVTEAELVQLFIARTTLDPQIRAVDKSVIEARLEKWRALRQPQSVPGMTAREVA TIARFWQSIVPGAKQHIDDALWHQFALLVPSLDLSTRASVWSLLWGEQQELTQQWLKLAH VLHQTSHASVLAAPLSLLVDSFGLPCEGFLTHGAFTMPETQETLLHPVKNGELLNAISLP VDVLASLTRELVLPVEHCVLDNVDIIDIPAISEEHTPLMTQAKCLWLLDHYRQHIQPDVL VICNATAHHQQTAKTARRLQNWVKETQPVEESALPGLVWAITPHDARFTTKQNLDEAVQQ LLGQPGLRWGTLQALDTHSMQRVIEWLSQATLPAQRQKRLHTLKRLLQQSLSALMRPYVG PLTQDPGAGRSQAEKMVRTLQGSAARHGELLEGLLPPLKAFETLLTVHQPREEQVNGLFN DVIDLFAEETQENPAAVQTKDKARMAHSVWVNHLRQWSRNDAAAARLGLDAEVLQQIADV LIVTSYRLDLPLQLQRIVETDKSSAAQLHAATGNFISWLGYEVTPVSERPASRIRKGQPI FVTPVVSSASPRLTRLGEQPVHAATAYVYDWLVALYTRAIENVDYQCPYDVQPAARKALS ALLS >gi|333596725|gb|GL892087.1| GENE 228 257413 - 258171 251 252 aa, chain - ## HITS:1 COG:RSp1229 KEGG:ns NR:ns ## COG: RSp1229 COG0596 # Protein_GI_number: 17549450 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Ralstonia solanacearum # 19 248 29 265 272 74 28.0 1e-13 MNSFYSQQAGCTVRWQDLPGYGDPVVFIHGLGCASSYEYPRIVCDPRFGGRRAILIDLPG SGYSDKPDNYRYRTSEQAQVVVELLNHLDLDSLWLYGHSMGGSIAIETATLLTSRVKGLI VSEPNFHAGGGMFSRAIAAQTEQHFLEQGYDDMLRAEMSPWAGSLQSNAPWAVWRGATSL VKGVKPDWEHLFLSLSCPVMLVFGELSLPDDDFNRLQQKGVALKIIPDAGHSMSWENPSA LAQALSGFINGS >gi|333596725|gb|GL892087.1| GENE 229 258258 - 258476 159 72 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2120 NR:ns ## KEGG: Ent638_2120 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 12 72 8 68 68 90 85.0 2e-17 MTHIACGYFSAQVNRMTLYQKMLVFYAIMASICALITWFLSKDRKRIRLLSAFLVGSTWP MSFPVALLISLF >gi|333596725|gb|GL892087.1| GENE 230 258675 - 259001 367 108 aa, chain + ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 1 105 1 105 119 179 78.0 1e-45 MLRIPQSCIHTRSTPFWNKETAPAGIFKRHLDTGTRPGVYPRLSVMRGAVRYLGYADEFT PEPDSELVIEAGRFGVFPPERWHHIELMTDDTLFNIEFFVEPEVLKSL >gi|333596725|gb|GL892087.1| GENE 231 259029 - 259382 424 117 aa, chain + ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 1 116 1 119 119 149 57.0 1e-36 MLRIPENFVHTRSTPFWNKETAPEALFTHHNTKAGVYGRLSVMQGAVRYFGFADGDATEP DLDVVIEAGSFGISPPQKWHRIELLTDDTYFNIDFFADPAVTLSGAGIGKVVNTHKE >gi|333596725|gb|GL892087.1| GENE 232 259386 - 259568 267 60 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2123 NR:ns ## KEGG: Ent638_2123 # Name: not_defined # Def: putative cytoplasmic protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 60 1 60 60 100 95.0 2e-20 MGKATYTVTVTNNSNGVSVDYETEAPMELLIPDVAADVVKDLVNTVRAYDTENEHEVCGW >gi|333596725|gb|GL892087.1| GENE 233 259604 - 261028 1192 474 aa, chain - ## HITS:1 COG:STM1597 KEGG:ns NR:ns ## COG: STM1597 COG1012 # Protein_GI_number: 16764941 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 474 8 481 481 816 86.0 0 MQNQLLINGELVAGEGEKQAVFNPATGEVLLEIAEASAAQVDAAVQAADRAFTGWGQTTP KTRAECLLKLADVIEANADAFAQLESLNCGKPLHCVQGDEIPAVVDVFRFFAGAARCLNG LAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNCVVIKPSEITPLT ALKLAELAKDIFPPGVLNVLFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIIGHTASSV KRTHMELGGKAPVIVFDDADLEAVVEGVRTFGFYNAGQDCTAACRIYAQKGIYPALVEKL GAAVASLKMGAPDDTSTELGPLSSAAHLSRVCAAVDEAKALGHIRVVTGGSKKEGAGYYF QPTLLAGAKQEDAIVQREVFGPVVSVTTFEDEAQVLAWANDSQYGLASSVWTKDVGRAHR LSARLQYGCTWVNTHFMLVSEMPHGGMKLSGYGKDMSVYGLEDYTVVRHVMIKH >gi|333596725|gb|GL892087.1| GENE 234 261169 - 262593 1429 474 aa, chain - ## HITS:1 COG:STM1598 KEGG:ns NR:ns ## COG: STM1598 COG1167 # Protein_GI_number: 16764942 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Salmonella typhimurium LT2 # 1 468 1 468 474 790 84.0 0 MKKYQRLAQQIISQIELGVWLPGDKLPSLREQVASSGMSFMTVGHAYQMLESQGRIVARP QSGYYVAARPTTHQPAPPAQVMREEVVDINTYIFDVLQASRDPSVVPFASAFPDPRLFPL QQLNRSLANVSKTATAMSVIENLPPGNVDLRHAIARRYAQQGMNISPDEIVITAGALEAL NLSLQAVTEPGDWVIVENPCFYGALQALERLKLKALSIATDVREGIDLSALEQALNDYPV KACWLMTNSQNPLGFTLSAEKKAQLVALLTRHNVTLIEDDVYSELYFGREKPLPAKAWDK QDMTLHCSSFSKCLVAGFRIGWVAAGKHARRIQQLQLMSTLSTSSPMQLALVDYLATKRY DAHLRRLRRTLAERKQQAWQSLLRHMPSGVKIHHNDSGYFLWLELPEQLDAGRLSEKALT HQISIAPGKMFSTSNIWTPFFRFNTSWGWGEREELAVVQLAALIREMMLPPVTP >gi|333596725|gb|GL892087.1| GENE 235 262676 - 262864 155 62 aa, chain - ## HITS:1 COG:no KEGG:ECL_01846 NR:ns ## KEGG: ECL_01846 # Name: not_defined # Def: putative cold-shock protein # Organism: E.cloacae # Pathway: not_defined # 1 62 1 62 62 109 91.0 4e-23 MTSYIHFRCPCCHGSQYRTSAFDVSDKNPFGAKCIFCKSPMITLDHLAAARFAQNHVTEY RK >gi|333596725|gb|GL892087.1| GENE 236 263258 - 264652 1216 464 aa, chain + ## HITS:1 COG:STM0360 KEGG:ns NR:ns ## COG: STM0360 COG1271 # Protein_GI_number: 16763740 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 4 464 3 463 467 754 83.0 0 MFGLDAFHLARIQFAFTVSFHIIFPAITIGLASYLAVLEGLWLKTKNPVWRSLYHFWSKI FAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW NKVGPGLHFFSTCMVALGTIISTFWILSSNSWMQTPQGYEIVNGQVVPVDWFAVVFNPSF PYRLLHMSIAAFLSSALFVGASAAWHLLRGNSTLAIRTMFSMALWMTLIVAPIQALVGDM HGLNTLKHQPAKIAAIEGHWENLPGEPTPLLLFGWPDMEQERTRFSLAIPALGSLILTHS LDKQVPALKAFPKEDRPNATIVFWSFRIMAGLGMLMLILGVAAVWLRYKQRLYTSRPFLW FALLMGPSGLIAILAGWVTTEVGRQPWVVYGLQRTKDAVSAHGDLHMSVSLLAFFVVYTA VFGVGYSYMVRLIKKGPQPQESFATEFDGRPARPLSAVTTEFKE >gi|333596725|gb|GL892087.1| GENE 237 264712 - 265668 752 318 aa, chain + ## HITS:1 COG:STM0361 KEGG:ns NR:ns ## COG: STM0361 COG1294 # Protein_GI_number: 16763741 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 318 19 336 336 416 72.0 1e-116 MYIVMDGFDLGIGILFPATPNADDRDVMVNSVAPVWDGNETWLVLGGAALFGAFPLAYAV IIDALTIPLTIMLIGLIFRGVAFEFRFKATPAHRPFWDKAFIGGSIVATFSQGVTVGAVI HGFSVTGRAYSGGPFDWFTAFNLFCGAGLVVAYALSGSTWLVMKSENTLQQRMRQISKVL LLLLLVFIAAISIWTPLAQPTIAARWFTLPNLFYLLPVPALVVILSLCQWRCLNDPASHT LPFIMTIGLLFLGFIGLGISIWPHIIPPDITLWQAAAPAQSQGFMLVGALLIIPVILVYT FWSYYVFRGKVQHGEGYH >gi|333596725|gb|GL892087.1| GENE 238 265920 - 266357 433 145 aa, chain + ## HITS:1 COG:hslJ KEGG:ns NR:ns ## COG: hslJ COG3187 # Protein_GI_number: 16129340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Escherichia coli K12 # 1 142 1 134 140 145 56.0 3e-35 MKKLAAVSLISLALAGCVNPGKASVQTDQLENHRFVLENVDGKAVKGGKTLPEIRFSAQP NISLINNIVVSGTMCNGFNGQGKLSEGELTVKTLAMTRKLCTEPQLNELDQTIADMLRKG AQVDLTEDQLTLATADKTLMFKRVE >gi|333596725|gb|GL892087.1| GENE 239 266359 - 266625 176 88 aa, chain - ## HITS:1 COG:STM1649 KEGG:ns NR:ns ## COG: STM1649 COG3042 # Protein_GI_number: 16764993 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 38 88 1 51 51 64 90.0 6e-11 MRSAFWVGCAALLLSACSNEPVQQATAAHVTPGMRAAMSSSGQANCAMIGGSLSVARQLD GSAIGMCALPNGKRCSEQSLAVGSCGSY >gi|333596725|gb|GL892087.1| GENE 240 266894 - 270418 3267 1174 aa, chain + ## HITS:1 COG:ECs2000_1 KEGG:ns NR:ns ## COG: ECs2000_1 COG0674 # Protein_GI_number: 15831254 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 783 92.0 0 MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGVKNVWGDVPRVVEMQSE AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCASSVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV PLPDDTLLNLLPQADIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYEHVE RAMDDFAAATGREYKPFEYYGHPQAERVIVLMGSAIGTCEEVVDALLTRGEKVGVLKVRL YRPFSAKHLLAALPDSARAVAVLDRTKEPGAQAEPLYLDVMTALAEAFNSGERETLPRVI GGRYGLSSKEFGPECVLAVFTELRESKPKPRFTVGIYDDVTNLSLPLPENTLPSNAKLEA LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEHPIRSAYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLINTPYSADEVWARLPQEVQAVLNQKQARL YVINAAKIARECGLAARINTVMQMAFFHLTNILPGDSALMELQGAIAKSYSSKGQELVER NWQALALARESLFEVPLQPVNASSPNRPPVVSDAAPDFVKTVTAAMLAGLGDTLPVSALP PDGTWPMGTTRWEKRNIAEAIPIWKEELCTQCNHCVAACPHSAIRAKVVSPEALAAAPES LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQDPSIKAINMMSRLEHVEEE KVNYDFFLDLPEIDRNKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRARVMRL LAQFADKIPAELNDALHAEATPDVRRAQVAELHNALQGTEGAEQLLTDADALVEKSVWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSDALAETLLQEQRFRRLNAQQP EVAEQLWKDAAADLQKRYDFLAQLAGKAEKSTSD >gi|333596725|gb|GL892087.1| GENE 241 270807 - 271934 1441 375 aa, chain + ## HITS:1 COG:ompN KEGG:ns NR:ns ## COG: ompN COG3203 # Protein_GI_number: 16129338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 23 375 23 377 377 515 82.0 1e-146 MQRKVLALMIPALLMAGATHAAEIYNKDGNKLDLYGKVDGLHYFSDDTSKDGDQTYMRLG FKGETQINDMMTGFAQWEYNIQANNTEGSDNQSWTRLAFAGVKFGDYGSFDYGRNYGVLY DVEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVQGLDFAVQYQGNNEGNN CDENFCSTNEGTNNGRDTRHENGDGYGISATYDFGMGFSAGAAYASSDRTNDQVNYTTAG GDTADAWTAGLKYDANNIYLAAMYSETRNMTPYGDNADAVANKTQNFEVTAQYQFDFGLR PAISYLQSKGKDLGNGQDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYKNNG IGTDDIVALGLVYQF >gi|333596725|gb|GL892087.1| GENE 242 271970 - 272392 264 140 aa, chain - ## HITS:1 COG:STM1643 KEGG:ns NR:ns ## COG: STM1643 COG3791 # Protein_GI_number: 16764987 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 7 137 8 139 149 201 71.0 3e-52 MADIRLAQCHCGAVKFTVELTDGLNTARRCSCSFCRMRGAVVVSAPLTGIKVTQGADALT EYRFNTGTARHFFCSICGIYTFHQRRSNPNEYGVNVACLENVTPFDFPEVVVMDGVNHPA DGDSGVIGYLSFRKEEAKQR >gi|333596725|gb|GL892087.1| GENE 243 272396 - 272593 155 65 aa, chain - ## HITS:1 COG:no KEGG:KP1_3238 NR:ns ## KEGG: KP1_3238 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 64 75 138 139 96 78.0 3e-19 MKNKDEQTGLVGLAIGAAVIGLVSSQKIINRESIVDELVRLGRQKGDGVEDEVFLKAAEL VRKGV >gi|333596725|gb|GL892087.1| GENE 244 273234 - 274169 1122 311 aa, chain + ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 610 93.0 1e-175 MQQNQEINKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR NLQQSAPVNFSLVAVNLDQKQPGFPEHILPEYLENLGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG KHIVIRPLAYCREKDIERFSQAKAFPIIPCNLCGSQPNLQRQVIGDMLRDWDKRYPGRIE TMFSAMQNVVPSHLADVELFDFKGINHGSEVVNGGDLAFDREEIPMQPAGWQPEEEDAQF DELRLNVVEVK >gi|333596725|gb|GL892087.1| GENE 245 274212 - 275585 1229 457 aa, chain - ## HITS:1 COG:dbpA KEGG:ns NR:ns ## COG: dbpA COG0513 # Protein_GI_number: 16129304 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 457 1 457 457 830 91.0 0 MTAFSTLNVLPEAQLSNLNELGYLTMTPVQAAALPAILEGRDVRVQAKTGSGKTAAFGLG LLQHIDATLFQTQSLILCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ HAPHIIVATPGRLLDHLQKGTVSLDALQTLVMDEADRMLDMGFSDAIDEVIRFAPATRQT LLFSATWPEAIAAISGRVQKNPLTIEIDTVDALPAIEQQFFETSQQGKIPLLQKLLSQHQ PASCVVFCNTKKDCQAVCDALNDAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILAEML QLKLNWVSAPGNISIAPLAAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKITV HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK >gi|333596725|gb|GL892087.1| GENE 246 275643 - 275966 147 107 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQRQAMGVALHIVLLPFFELLHSTIDSYDADFIVGFFLPPVYLRLPFRGQHPNQEEKMSM LLALQRLNTWQSDPVPTDPTPIPDPVPRPQPMPDPPPDEEPIKLSHR >gi|333596725|gb|GL892087.1| GENE 247 276071 - 276811 575 246 aa, chain - ## HITS:1 COG:ECs1926 KEGG:ns NR:ns ## COG: ECs1926 COG0598 # Protein_GI_number: 15831180 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 246 82 327 327 458 90.0 1e-129 MGEGTLITLRCINGSTDERPDQLVAMRVYMDERLIVSTRQRKVLALDDVINDLKEGTGPT DCGSWLVDVCDALTDHASEFIEELHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYM TPQRDVYARLASERMSWMNDDQRRRMQDIADRLGRGLDEIDSCIARTAVMADEIAQVMQE SLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGEYHYGFTTFCVMLVVLIGGVAWWL HRSKWL >gi|333596725|gb|GL892087.1| GENE 248 277145 - 278275 843 376 aa, chain - ## HITS:1 COG:STM1657 KEGG:ns NR:ns ## COG: STM1657 COG0840 # Protein_GI_number: 16765001 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 366 1 366 384 426 69.0 1e-119 MLRNISVRTFILYFLLCVFLVSDGVIALFSRSSSLFIAVIVVQCIALFLLWAYMTKYLVT PINTVKKSIEEVTSGKLGVSIPEFGNNCAGRLIPGINSLSSNIATLVREIRASSQTAMTL SDQLSSRSAQLSVKTEQQSASLVQTAASMEQMAASTKNNADNTRLASEQANIATLQARKG GELMGQVANNMQSITDCAQQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVA GEVRSLAHRSAEAAKNIKSLIEVTSHNVTQGVNVVSEAEKNMHDIVTGSGNVSRLMDEIS ASTSEQEKGISQITQALSELERVTQSNVSMVEELNGSSDVLRNQVIELQTRTRNFRLENE YVTDNALSSREWAVNS >gi|333596725|gb|GL892087.1| GENE 249 278594 - 279082 183 162 aa, chain - ## HITS:1 COG:no KEGG:ECL_01822 NR:ns ## KEGG: ECL_01822 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 162 1 159 159 191 57.0 1e-47 MSARERFFKKVQQNNGDKPIYINTAEAEVRAFCQRMDDLAQQIMAWFDGSGIDVILSKKH ITDLSTVGYSLNSSICRYAITTISLQNGDRSVSILPEQMIRGAEKGCMTMRIYAPGSISE ERIYHLSMAPETGWYIRREYQSAKENVLMTEDYFFQTVDCLA >gi|333596725|gb|GL892087.1| GENE 250 279107 - 280438 1099 443 aa, chain - ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 437 1 448 455 293 44.0 4e-79 MTIHSERQLKTGGDPRTLTDYAALRDEMNKLTHPARPDVNWQHAETLCLSLFEHNGVELQ TAAWYTLTRTHLAGLYGMNEGLALMAALVVRQWGNLWPQPVHARVEILSALSKRLQQVVR TLTLTYADLRQLYLAEEHLNTLSDVLHRLELKHAAQLDALRTMMQNAAVRLENSENTGVT LPGDAVEAAELHLTEPTERSKWVYVVQPEPLPHVEVVKEPSVPVKQWKPFAAGMLTMLVA ASVVVGGWQMMHAADSAQMQLAATLAPLPEGLSTAQLQALQQTSPSPELGISKTQQLLAQ LLQLKPDWAVSYGDRLVQQALTLWPEEAKPLAQQWQKQMSLNALAKSDLNGWHEGMTQLQ QLTTKLNALDEQKGKYMTVSELKSAVFAMSQSFGHTVPLEEQLRLLSALPAGQPLSAAQQ NQTEQHLQQLIASYALLKHKKEQ >gi|333596725|gb|GL892087.1| GENE 251 280462 - 280917 480 151 aa, chain - ## HITS:1 COG:YPO1488 KEGG:ns NR:ns ## COG: YPO1488 COG3518 # Protein_GI_number: 16121761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 150 5 149 150 196 73.0 1e-50 MPQGHNTPSLYEMLSGNFSGGLSLSQVSEQNQVILSVLDNMQRILNSRAGTLAHLPDYGL PDMTKILQGMPGTAHELITTLSAVLLKYEPRLSKINVVMQEQIRPGELRYAIDAELKGVG LVRYGTEFMPEGRVLIRHLKHQQYLDTRAAI >gi|333596725|gb|GL892087.1| GENE 252 280917 - 281462 393 181 aa, chain - ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 21 175 3 157 162 214 69.0 5e-56 MLRTNLIKPACWLPALLAFSLTGCGVTQGIADGTKSAFNAVFYKKIKVLHLDFTAREALN TDTRESNSLSEPVVVRIYQLKDRKTFDKTVYQQLLKDGEAMLETDLLATRDVVVKPGGDT NLDMPMEDEAQFVAVVGLFRHPDMVKNTWKQVLKREDLDPDKPRILEAGNNHLTLLPLED D >gi|333596725|gb|GL892087.1| GENE 253 281440 - 282525 832 361 aa, chain - ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 360 1 359 361 448 63.0 1e-126 MGREAQSPHSRLSPRLEADLHRINFYRLCQLLEKRNPGMPLMGSTSHPGDDPVRFAPHPG MGFPASELKAVEYDEDDDSRPPLIRTTFMGMYGVDSPLPTAYLDDITQRREGHEALQGFL DIFSHRILTQFYRIWRKYSYPATFEPGGTDSISQSLLGLVGLGIPGTADHIATPVSRFLA LLGVLQQPGKTQEGMQALVTLLAPDTTVRVSPYCLRPVEIGQPLGFYGDDDFLLDGNTPL GDEAMDASSQLLVALTTDNEQEAQGWKPDGLLYQDFLVMLRVWLGWRFKAKITLTTRTRL LAVPPLGEGPFWLGMNGVLGAEEGELSDDIPPTFTTELGYYTGLKPAIKQQGNRRVTYKF N >gi|333596725|gb|GL892087.1| GENE 254 282489 - 284243 1629 584 aa, chain - ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 584 1 587 587 976 77.0 0 MDDLTLRYYDAEMRYLLEAGEEFARAHPEQAAMLNLDKAGARDPYVERLFEGFAFLMGRL REKLDDDLPELTEGLVSLLWPHYLRTIPSMSVVEFTPDWREMKEPMRIARGFEVNSRPIG EKGTRCRYTTTKEITLQPLALEHARLSTDPDGRSVISLRFSCSHLADWSRVDLSQIPFYF NADAPLACAMHEAFTMNTARLWLRMPGDTDRRPMDGYFTALGFGDDDRLWPKGDSSFSGY QLLLEYFTFREKFMFTGLRGLENIAFPADLPWFEIDVVLAERWEHDFSFSEKHLRLNCVP VINLFPLESDPLTLNSLQTEYMLRPMRVQDGHTEIYTVDSVMSSSQHTYVPFSSFRHKGG MMRHEAPEYHYHTRVRRGPSGLHNTWLILGGEAFDNHTVPEDESLSLTLTGTNGQLPRRA LQSTVLDTVMKTTSVSIAVRNLCAPTLPCYPPAQDRFHWRVLSHLGSGFLSMMDNADVLR GTLALYEWTDSEMNRRRLEAILEVKHSETERFEQGYLVRGVQIEVTLDSHGFAGRGDICL FGEMLSRFFALYTDIYLFNRLIIILQPTGERLEWEEKHNRRIPG >gi|333596725|gb|GL892087.1| GENE 255 284749 - 286014 385 421 aa, chain - ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 3 121 2 118 512 128 52.0 2e-29 MPAKGFYLVQGDKTTCGGKIITGAEDHTLFGKPVAREQDGVTCGKFPGIYKVAGGINNDA IHGRRMAGTLDSFSSCPCRAKFIPSMMDDTYEKSSGVSTAESAAGFVAPAQTTPELPSYL TGEQKPTGFVSDYPVLKNIHDLPDEKLRMMFKQNNQDIMLLTLPEVFEILSSWGAWKYGW IAITESTPGRIIVNYGTNIKDVVTTSMLVGQLGSFGIKATVYVNHKGTELIKISGYPGVR KILNAPVFSAKNPKVVDIGIGKYGLAKSIIEGARLTFYVAAAYRTIDYIMNDEISFAEFI GSLATDVVKIGIASAVVWGMGLVLVTPWIVANLAIVVVVGGVAAITLNVLDDKFGATDKV LAYIESAQQEFANKAREVEQGLLDLGAMFAEQMLIRGRDVIVEKVRNYIRDNLTSIQRRL Y >gi|333596725|gb|GL892087.1| GENE 256 286048 - 286254 203 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDDLTLRYYDAEMRYFLEVREEFAQAHPEQAESSMRPDVIKSQLQQKMDQLLADLIVLDP ASSAVLCG >gi|333596725|gb|GL892087.1| GENE 257 286338 - 286814 -96 158 aa, chain - ## HITS:1 COG:no KEGG:KPN_01345 NR:ns ## KEGG: KPN_01345 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 3 158 1 156 156 194 60.0 8e-49 MIMKKKVILGCIILFSGLLVLVVHVFPIRPFVTITNNTNKHLFIYAGESIYDVDPEPEEV ERIVRSKPKIIAPGEKSEFTASFISLVRRDAVIDIGWRIGGQYEYNSVGGGGRNFILSST AGACSVSIKINDGFNNDILEKAPGDLCFKKIKAFNYKY >gi|333596725|gb|GL892087.1| GENE 258 287565 - 288845 323 426 aa, chain - ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 3 116 2 109 512 128 51.0 2e-29 MPAKGFYLVQGDKTTCGGRIITGAEDHTLFGKPVAREQDGVTCGKFPGIYKVAGGIDNDI IHGRRMAGTLDSYSSCPCKAKFIPSMWDDTYEKSSAGAILAAEESGRTSLANAVSQAFLA GSQTDTMLAPGYPVLINTHTVPDDNVRGMLRANRHDFLLLTLEECQRIIDGWDFVKKTWK DAVTNPVGNTVKTYATNIDDAASASAMVYKLGSIGITATVFINHKGTRLIKISGYAAIRK TLNAPVFAEMNPKIIEAGIGKFGLKKSIIQGAILGFIYVSVIDTIDFILNDETTLAKFLG TLATDIVKVGITSAALYAVGLYTMSAYIVLNIAVVLVFGAGLAWVLNTLDRKYHITDSLV EFMAPYIESAQQEFVERSREISNDLLDLGAMYIDGKLREGRQVIESEIKQYIKKLIGDLA PQVINL >gi|333596725|gb|GL892087.1| GENE 259 288878 - 290479 984 533 aa, chain - ## HITS:1 COG:YPO1483 KEGG:ns NR:ns ## COG: YPO1483 COG3515 # Protein_GI_number: 16121755 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 533 1 533 533 569 57.0 1e-162 MDALQNLVVACQADETLLRQQAQSRTESWQRWFAPVSEISPTGEDPGYDDDFQRIREEVN KLSGIDTGLICQLAEKVLTTVAKDVRVVTYYCWARLHQDGETGFAEGLELLAGLLTRYGK QLHPQRERSRKPALEWLAGSRLLDSLLLWPEVVRDDALRTTGALLLIRDSLETEPEASRP DLNALYSALGSRLTKAGGVDAVIPQNASSQTRPQSASHTAEQDAPALSRITSGQDLLAQA RTLTGYLREQPDGWLAAHRLMKSLRHDTLRAIPAPDAEGKTRIEPPRADQRAMLKRLYLQ QSWLEILEQADSTFSRGANHLWLDLQWYIHQALIKLGQDVLADIITDDLKGLLRRLTGLE TLAFNDGTPFADEVTLNWINQSVLDELSNWRDEPVNAASETDNDILALEPEALEKADTEG LDATLHWLQTRPGSNTTKDKWLVRLLMARVAEQKGRNELALHLLGELDGAAQSITLMQWT PALLFEVKSRRLRLLRMKAARSETDKSRLQPDMDQLLAGLIALDPAGSAVLCG >gi|333596725|gb|GL892087.1| GENE 260 290479 - 293841 2690 1120 aa, chain - ## HITS:1 COG:YPO1482 KEGG:ns NR:ns ## COG: YPO1482 COG3523 # Protein_GI_number: 16121754 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 1117 29 1140 1140 1296 61.0 0 MTFMVWKHPDIAGVQEGSQQQIYWLIAGGCISGCTLILSVVLLAAVRNAGKQEFNALVDD TRGDDEKKKRGNDNTPVHPAVVMCDRIRAHLRSRISFYWRSKTRLLLITGDEAAIEQLVL QQQLWLEGNRTVLIYGGSLASEPDREKYTALRKLRRGRPLDGIIRVLPESLNLTPKISDS DLRGLEKISELLGYSAPVWLWQLCSSHWSQGTRPEQAVGASFPLRAKENDVIRQLELMLP ALRAQGVSQVAGNNSHDFLLRLGQHLKDGGITRWAQQLVPWLSVSQQRVSLRGLMFSLPA DTSAGTADAENYGSQRHALTLPATWQGIVDDCKRVRGRRVGMPWERALAWALMATISVWG SGTLLSFAVNRSQIVSVAQQAHALVEHPSVSDYQLTALHTLRNDAGRLLHYIQDGSPWYQ RFGLDHNQQLLDAMLPWYGVANNRLIRDSANEALKQKLSALANSAPNSDQRTQMANPGYD QLKAWLMMSRPDKADGAFYAQTMKAVQPTRLGISTGLWQSLSPDLWAFYITELPAQSQWK ITPDAQLVSQSRQVLLQQIGRRNAESTLYENMLKSVRRNFADVTLEDMTGGTDARRLFTT DEVVPGMFTRQAWEGGIQQAIEKAANSRRDEIDWVLSDSHKAVSSDLSPEALKARLTQRY FTDFAGSWLSFLNSLQLNPANNIADVTDQLTLMSDVRQSPLIALMNTLAWQGQTGQKSEG LSDSIIKSAKDLVGGRDKPMIDQSASGPQGPLDETFGPLLTLMGKNKGSNIMSADNSLSL QTYLTRITRVRLRLQQVASASDPQEMMQTLAQTVFQGKSVDLTDTQQYGSLIAASLGEEW SGFGSTMFVQPLTQAWETVLQPSAASLNDKWSRSVVANWHTAFDGRFPFAVSKSDSSLPM LAEFVRKDSGRIERFLTTELGGVLHKEGSQWVPDKVNSQGLNFNPAFLRAINQLSQLSDI LFTDGSQGISFELQARPVPQVVETQLTIDGQKLHYFNQIADWQSFRWPGDTYKPGTMLTW TTVNAGARLFGDYSGTWGFIRWLDESKREQLDRSQWMMSFTAPDGRTLQWVLRSQLGSGP LALLALRGFTLPDQIFSVDSAAMAEALMTNTENSDMDGIE >gi|333596725|gb|GL892087.1| GENE 261 293925 - 295133 611 402 aa, chain - ## HITS:1 COG:no KEGG:PANA_4139 NR:ns ## KEGG: PANA_4139 # Name: not_defined # Def: Hypothetical Protein # Organism: P.ananatis # Pathway: not_defined # 1 402 1 402 402 653 81.0 0 MPYSLKDPPECYPRPVPPKTSRWFVVLAGMLVISVILMRIFGRYIDTRHFWLLAIGTPVV VWIISFGFRMWLWSLQDCKANSFDRRREHWILSETRKARRALQILNITFITAHQENKQSS VAVEMLNNHSIIISQSDWKGEKGKRLSRITTEPGETPELVVSRLLSELIADLPVGQFPEN ASLAVILDISSSLSFPAVREIWQEAWQESGITCAVEYVDSNGPGVVSHWLDYRIRDEVML LIVGLQIDPVASNNTAEAAVALLLGNRLTQEALEPLALLHRPDASPPGELSEGMKMAAWN VPLKGNIVKNLWLAGLTGEQHAEVVTCQNAHPAQSVADDSVISLDMSMGRAGAAAPWLAI AAATEITRQTQSPQMIICGDNTKNVLWSTLITPIASRQEMDP >gi|333596725|gb|GL892087.1| GENE 262 296164 - 296649 -74 161 aa, chain - ## HITS:1 COG:no KEGG:KP1_2403 NR:ns ## KEGG: KP1_2403 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 128 13 140 143 213 87.0 2e-54 MSSRVLAGDTGGISLLVKALPSASDYKYVLDGFFRNYYGVDNPRTPTCDQKDYVPYIDNI YLNTLPKGIDDNILIKSITDSSARTQIAKILSSYSDDQVSGFDGVLFYAANDNKLFIYTF DSKSPVYIFKNELNINDIINFKLLGRSVCQSISSKILPPSP >gi|333596725|gb|GL892087.1| GENE 263 296682 - 298589 152 635 aa, chain - ## HITS:1 COG:no KEGG:KP1_2402 NR:ns ## KEGG: KP1_2402 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 635 1 640 640 1027 83.0 0 MKFVKASYHLKTKTVEYEAGDGTRLLKIGGALSWRFNNPGNIIALPNASRQKGRIGAGTV YNPKKNTFVIFSSIEIGEREKCALLKRKYKDNTISEMMLQYAPESAGNDPVAYANFISSE SGVSKDKKISDLNVNEFDKVVAAISKKEGGLKPGTEKWVYVTNVTVSDGSRPVADVPFKV TLGSTTYEWKTDAYGKLKTIIHTEQGMAIILKYTNSAGKEDIVYSAVARDETKNILLTRN FSQFSAKTLAENPKVPREKSTQKPIEYIVMSGDSLSKIAERYKTSTDEIAKNNNIKDVSK IFPGQHLTIYGGNTSSPSVYIVSPGDTLAKIAAQNGTTVDELARENNISDPNKIYLGQSI FISTITEDSKASNPVSSSDKQALKPEHSVKKSPVNLNKKILESVGSKNSDEPIALLPHDQ REAPWMAIAIREVIEWHGTGEKEITDNYHKLMGSKASLGSTAWCASFANYCLKEAGYDYS KSFTKSSQFPVYDKTKFVEIKNPVYGALMVFRTYIESSDEFTGNGHVTFVYGKTSNGDIT GLGGNQGGKTYGGGTIKLSMYSTTKPTSRFKMTVRKKAETPVYQKFYKYYIPVAYKEYHS KISVELPLVDVDDVNKNLFGFDSETKSANDEGGGR >gi|333596725|gb|GL892087.1| GENE 264 298558 - 299016 200 152 aa, chain - ## HITS:1 COG:no KEGG:KP1_2401 NR:ns ## KEGG: KP1_2401 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 136 3 138 138 221 75.0 6e-57 MLNLLMKLTLSIAILVYHFGVNATCLKEGDEIVLSGVIKEELFYGPPNWGEDRNHDEKLL YWILHLDSPLKCVIDANTEQEGWDSNVQLIISGEDYKIKRSLLNHHVAVDGNVMLAVTGY HMTSVLLKNISFKQTKKLKRMTYEICKSVIPS >gi|333596725|gb|GL892087.1| GENE 265 299019 - 301799 2127 926 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 572 6 571 571 828 71.0 0 MSNNPPLRFSHSHHLLSVKDCDAGLDVLAFEGDEALSTPFSYRIEFTSTDHAISKEMMLM KAASLTLQAPVDQGYGIKIQQPVRVIQGVVTGFERLGTSKDETRYGVTLEPRLALLSRSH QNAIYQDMSVPQIVEKILRERHGMRGQDFLFSLSKAYPRREQVMQYSEDDLHFITRLLGE VGIWFRFTTDTRLNIDVVEFYDSQQGYEKGLTLPSVPPSGQHSQGVDSVWEMESRHNVVQ KEVSTRDYNYRQATEDMNTRVDATGGDTTTYGEAYHWADNYLTPGSAYDRNPAAETGAFY SRIRHERYLNGQTKTRAFTSCPVLSPGMLLKVTGGHEVAEVFAQGVVVTAMHSHARRDAD FCVRFEGIPDSPDFSFRPEPGSRPVMAGTLPARVTSTTENDTYGHIDKDGRYRVNMLFDR DNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HVTIRNYKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDSDRQKRGEGF ELRTDSRGAIRAQKGIFISADGQAKAQGQVLEMAPAVSNLGDAREQMTAISDDAQEATAN PADLQAQIALLEQHLTDLKKSVLLMSAPDGMALTSGQHLQVSAGQNLIATAGKNADVSVV KNLFIGVGSALSVFVRRLGIKLIANQGPVQVQAQNDLMALLARKELSIVSTEDEIKILAK KKITLNGGGSYITLDANAIEAATLGDYRTRAGFYDRQQKASAKPSFLTFPLLDGTDPGKS GTDEQGSEKEDPDNKQPVSEPCEQSLRFAFPGADSVSQSMDWMINQPYNITDSNGKILST GTVDSTGRIPKIILPESETLNLTIGRETWVTEELSISSTEYDDMEDIENEEPGDDLYLSE VGCAGDRTSALTESMIAKLLNLTKVS >gi|333596725|gb|GL892087.1| GENE 266 301796 - 304441 1319 881 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 24 875 15 814 815 512 36 1e-143 MENPAILLRRLNPYCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW DMDAIWQDMLGFLDSLPRSVRSRPQLSDSVQTLMQDAWLHASLSGEEHIRSIHLLMALVE KPKLLRCDGLWPLLTLAQSQLERLRGLMDAQSDERPEVQQEAELAQGDEVEFVGRPVNAD IKGELNPALQNALDKFTLDVTARAREGKIDPVFGRDNEIRQMVDILSRRRKNNPILVGEP GVGKTALVEGLALRIHEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQ SPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAA LERRFQMVKVDEPDDDTACLMLRGLKSRYAEHHGVHITDEAVKAAVTLSRRYLTGRQLPD KAVDLLDTASARIRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIAVGNTAHGERLAAIG EEEVRIILQLDERETQYGQELALTQELLACRADISRQAEIADLQQQLSDVQKNNPLLGLD VDARTVATVIADWTGVPLSSLMKDEQTELLSLEQNLGRRVVGQDSALNAIAQRLRASKTG LAPENGPQGVFLLVGPSGTGKTETALALADELFGGEKSLITINLSEYQEPHTVSQLKGSP PGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREIDFR NTVILMTSNLGSDLIMQMLEEQPEATEPDLHELLRPVLRDHFQPALLARFQTVIYRPLTQ AAMRTIVGMKLNQVSQRLARHYGMKTVIAESLSDALTAACLLPDTGARNVDSLLNQQILP VLSQQLLMHMAAGQKPQHLTLGWDEEEGIVLEFDRTEGVHA >gi|333596725|gb|GL892087.1| GENE 267 304611 - 305102 684 163 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 296 90.0 8e-81 MAIPVYLWLKDDGGADIKGSVDVQDREGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFL FTKEIDSSSPYLYKAVTTGQTLKSAEFKWYKINDAGQEVEYFNTKLENVKLVKVNPKMHD IKDPAFEKHNHLEQIELRYEKITWTYKDGNIIHSDSWNERATA >gi|333596725|gb|GL892087.1| GENE 268 305108 - 306814 1173 568 aa, chain - ## HITS:1 COG:YPO0974_2 KEGG:ns NR:ns ## COG: YPO0974_2 COG2885 # Protein_GI_number: 16121278 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 431 559 1 129 139 186 69.0 1e-46 MSPAQQRGLALWAALLSAVVCLGFLPVTRLVSVLVLLVLLGLILTFWTVASRRAGHDVTL CLDDLPEATYRQPVVLVCGDLPLAWPQQSPVLTVTQGCWIRVENHQDLEQTARQVLWLRP DWGRQLSVMVSVCPQKHADSEALTSRLLALRWQISQLRKETGHSVPLILNGQVGSAMTND QLWQAAIPGEGVRIWRESSAPASIAAWIATSGSAAMQQQVLMNSLMDWFYQHVQAVFTDE NPDVPVITPVAVLWGMGPILAGSLASSAWTAWLSRHTAMQQVVGWHPVGTDSTVISPLPD FVLPLLPEGRGLTPRDRTFRCALSIFTLAAVAALLSSGWNNRQLLQRVSFDIARYDGIPM KDLGPKGDAVAVLRDDAAQLDAWARNGVPVRMSLGLYQGGRLRMPVLEAIRSYVPAPPPS KPKLKTVPKIVRLDSMSLFDTGKWALKPGSVKLLVNSLVGIKAKPGWLIVVAGHTDSTGD DKSNQVLSLKRAESVRDWMRDTGDVPESCFAVQGYGESRPVAANDTTEGRALNRRVEISL VPQADACQAPDTTHASSQDDGADNNVTE >gi|333596725|gb|GL892087.1| GENE 269 306811 - 307500 674 229 aa, chain - ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 13 228 13 228 228 241 56.0 1e-63 MSDRKRGTAAFIDIDALLQDTWLQVISLRHGPTFQDGEGRTLWERCIDDVRRVQRDLKAS ELDEANCQHILTAQCALLDEAVKGRGVEDDACIQWYDIPLQGYFLGTMDAGDTLCDRMRD VLREPAPDHAVVTCFQRVMMLGFLGSFRSLNDPERVKLLNALNEYVAPFSYSHPHPVLAE SHAGRGMGGWLASWPVRIGLSAVVVAALWWGLDRWLDQTLLTLLPGAVK >gi|333596725|gb|GL892087.1| GENE 270 307497 - 308837 706 446 aa, chain - ## HITS:1 COG:YPO0976 KEGG:ns NR:ns ## COG: YPO0976 COG3522 # Protein_GI_number: 16121280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 445 1 449 450 586 67.0 1e-167 MKTEQPLWGRGQMVSPQHFQQQAAYAAWSAECIAQLGLSHPWGVINATFEPEVLKLGRLQ ARHLHLRFPDGTLIDTDNADDLPPVLGLESESQEVMVVLALPLLRANGGNCLKPDEVAGR PVRFRQRWRDVRNLFGDDTRQIAVMRPELTLRFAHQNNSDYLTCPVARLQQDSQGNWALD DTYLPPLLALRGSVWLLTQLEQLLTQLRARLGRLMDMRRESNERMADFAVADVSLFWLLN ALNSAEPVLGQFQRHPQSPPERLYPELARLAGSLLTFSLEHQVSAIPVWQHEQLNNVFPP LFDLLGDLLEASLPSRVVAIELEHDARLHFWQARLHDPRLREGADYYLSVRSPMPVAQLQ EQFPRQCKVGSPDHVRSIVNSSRVGVPLTPLRHVPAAIPLRLENQYFSLDVSHPLAIEMF QSGTCMFYVPGMLAEPELELFAVLRT >gi|333596725|gb|GL892087.1| GENE 271 308853 - 310388 2091 511 aa, chain - ## HITS:1 COG:YPO1466 KEGG:ns NR:ns ## COG: YPO1466 COG3517 # Protein_GI_number: 16121741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 511 1 516 516 867 80.0 0 MSVNTETASAQGQTTVLEKEGVYASLFEKINLTPASSLGDINAFLDDAALSDAPAGERLT AAMQVFMDCIRKSGQPVEKLDKTLIDHHIAELDFQISRQLDAVMHHQEFQKVESLWRGLK QLVDSTDYRQNVKTEILDVSKEDLRQDFEDAPELIQSGLYWHTYTAEYDTPGGEPIGSVI SSYEFDASPQDVALLRNISKVSAAAHMPFIGSVGPKFFLKDSMEEVAAIKDIGNYFDRAE YIKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHEKYLWTSASF SFASNMVKSFINNGWCVQIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPETREFEF ANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIAHYLK LIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDAKVVVEDIEDNPGF FRVKLFAVPHFQVEGMDVNLSLVSQMPKAKA >gi|333596725|gb|GL892087.1| GENE 272 310429 - 310920 388 163 aa, chain - ## HITS:1 COG:YPO0978 KEGG:ns NR:ns ## COG: YPO0978 COG3516 # Protein_GI_number: 16121282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 163 3 164 166 219 75.0 1e-57 MADSFQNEVPKARINLKLALHTGGAQKKIELPLKLLTVGDFSNGKENRPLSEREKINVNK NNFNSVLSEFNPEVNLTVPNTMAGDGSEESIKLNFSDIKDFEPEQVARQIPQLRAMLAMR NLLRDLKSNLLDNATFRKELEKILKDPALSQELRDEMSALAPK >gi|333596725|gb|GL892087.1| GENE 273 311532 - 313148 1385 538 aa, chain - ## HITS:1 COG:mppA KEGG:ns NR:ns ## COG: mppA COG4166 # Protein_GI_number: 16129290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 538 8 544 544 971 89.0 0 MKHPVSLLCTALWLCGVSSLSYAAEVPGGTVLAQKQELVRHIKDEPASLDPAKAVGLPEI QVIRDLYEGLVNQNEKGELVPGVATRWQSNDNRVWTFTLRDNAKWSDGTPVTAQDFVYSW RRLVDPKTTSPFAWFAALAGINNAQAIIDGKAAPDTLGVTAVDAKTLRVQLDKPLPWFSN LTANFAFYPVQKANVESGKEWTRPGALIGNGAYVLKERVVNEKLVVEPNSHYWDNANTVL KKVTFVPINQESSATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNT QKGPTADARVRLALSMTIDRRIMAEKVLGTGEKPAWHFTPDVTAGFTPETSPFEQMSQQE LNAQAKTLLQAAGYGPQRPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKT YIDSRNTGNFDVIRASWVGDYNEPSTFLSLLTSSHSGNISRFNDPAYDKIIHQATLETTE KARNADYNMAEKILAEKAPIAPIYQYTNGRLIKPWVKGYPINNPEDVAYSRTMYIEKH >gi|333596725|gb|GL892087.1| GENE 274 313332 - 314045 189 237 aa, chain + ## HITS:1 COG:ECs1905 KEGG:ns NR:ns ## COG: ECs1905 COG2866 # Protein_GI_number: 15831159 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 236 21 256 262 430 87.0 1e-120 MATTRPRTERGAFPPGTEHYGRSFLGAPLIWFPAPEADRNSGLIIAGTHGDENSSVVTLS CALRTLSPDLRRHHVILTVNPDGCQLGLRANARGVDLNRNFPAANWRAGETVYRWNSSAQ ERDVVLLTGDKPGSEPETQALCQLIHKIHPAWVVSFHDPLACIEDPRHTALGQWLADAFA LPLVTSVGYETPGSFGSWCADLGLHCITAEFPPISSDEASEKYLRAMTDLLRWQPQR >gi|333596725|gb|GL892087.1| GENE 275 314036 - 315001 696 321 aa, chain - ## HITS:1 COG:ECs1904 KEGG:ns NR:ns ## COG: ECs1904 COG4948 # Protein_GI_number: 15831158 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 321 15 335 335 483 79.0 1e-136 MRSVKVYEEAWPLHTPFVISRGSRSEACVVVVECEEDGVKGVGECTPYPRYGESLASVMA QIMTVVPELQAGLTREALQQRLPAGAARNAIDCALWSLEAAKQHKPLPSLLNMTLPQSIV TAQTVVIGEPEQMAASAQALYATGATLLKVKLDDRLISERMVAIRAAVPDATLIVDANES WHSEGLAARCQLLADLNVAMLEQPLPAEDDDALANFIHPLPVCADESCHTRESLSSLKGR YEMVNIKLDKTGGLTEALALAKDAQAQGFTLMLGCMLCTSRAIGAALPLVNSVRFADLDG PTWLAVDVSPALNFTSGVLHL >gi|333596725|gb|GL892087.1| GENE 276 315107 - 315613 616 168 aa, chain + ## HITS:1 COG:ECs1903 KEGG:ns NR:ns ## COG: ECs1903 COG2077 # Protein_GI_number: 15831157 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 273 85.0 1e-73 MSQLVHFQGNPVAVAGSIPQSGSKAQPFTLVAKDLSDVTLSQFAGKRKVLNIFPSIDTGV CAASVRKFNQLATEMDNTVVLCISADLPFAQSRFCGAEGLSNVITLSTLRSPDFLENYGV AISEGALKGLAARAVLVIDENDNVVFSELVNEITTEPDYTAALETLKA >gi|333596725|gb|GL892087.1| GENE 277 315648 - 317189 1549 513 aa, chain - ## HITS:1 COG:STM1683 KEGG:ns NR:ns ## COG: STM1683 COG3283 # Protein_GI_number: 16765026 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Salmonella typhimurium LT2 # 1 513 1 513 513 919 88.0 0 MRLEVFCEDRLGLTRELLDLLVLRSIDLRGIEIDPVGRIYLNFAEIEFNTFSSLMAEIRR IAGVTDVRTIPWMPSEREHLALSALLEAMPEPFLSLDLKNKVERVNQASCQLFAQSQEKL IGHPATQLIAGFNFQRWLDSNPQNTHSEHVVINGQNFLMEITPVYLKGENAARVLTGAVI MLRSTVRMGRQLQNLSSQDVGAFSQIIAVSPKMRHVIDQARKLANLTAPLLITGDTGTGK DLLAHAVHMASPRAAKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI GEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGVFREDLYYRL NVLTLNIPPLRDCPQDIMPLTELFVARFADEQGVPRPKLSADLGTVLTRYGWPGNIRQLK NAVYRALTQLEGYELRPQDILLPDYDAGTVSVGEEAMEGSLDDITSRFERSVLTQLYRSY PSTRKLAKRLGVSHTAIANKLREYGLNQKKGDE >gi|333596725|gb|GL892087.1| GENE 278 317301 - 318353 1223 350 aa, chain - ## HITS:1 COG:ycjF KEGG:ns NR:ns ## COG: ycjF COG3768 # Protein_GI_number: 16129283 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 346 1 346 353 561 86.0 1e-160 MTEPLKPRIDFTGQLEQSPHEAFKTAQTFSGPQADNFAPVLAEEPLVEEGQAEAVVDAAL RPKRSLWRKMVTAGLALFGVSVIGQGVQWGVNAWQTQDWVALGGCAAGALIVGAGVGSVV TEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAAQAGIDHSHPALQRWYAAIHE TQNDREVVTLYSHMVQPVLDSQARREISHSAAESTLMIAVSPLAMVDMAFIAWRNLRLIN RIARLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSARAAQGIG AGLLTARLGIKAMEVCRPLPWIDGDKPRLGDFRRELIGQLKETLNKKPAQ >gi|333596725|gb|GL892087.1| GENE 279 318350 - 319747 1156 465 aa, chain - ## HITS:1 COG:ECs1900 KEGG:ns NR:ns ## COG: ECs1900 COG3106 # Protein_GI_number: 15831154 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 465 1 465 465 903 92.0 0 MKRLKNEFNSLMNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNLHAGARLPLLSAVRE ERLLGVKRVPQRDFGIPRFTYDEGLAQLYGEPPAWPTPTRGVSEIRLALRFRSNESLMRH FKETSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLQGQRAEWSTKWRQLCEGLDP LAPADENRLAVIAEAWTDYLHQCKQEGLHFIQPGRFVLPGDLAGAPALQFFPWPDVDSIG ESKLAQADKTTNAGMLRERYNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTVDQHANMVSLLQQLVQD AWQNAAFEGISMDCLGLASVQATQSGLIDVNGEKIPALRGNRLSDGEPLTVYPGEVPARL PGQAFWQSQGFQFEAFRPQSMNVDQPLPHIRLDAALEFLIGDKLR >gi|333596725|gb|GL892087.1| GENE 280 319903 - 320913 477 336 aa, chain + ## HITS:1 COG:ECs1899 KEGG:ns NR:ns ## COG: ECs1899 COG1609 # Protein_GI_number: 15831153 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 330 1 330 332 492 74.0 1e-139 MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLKAIDELNYQPNKLARALTSSGF DAIMVISTRSTKTTAGNPFFSDVLHAITAKAEEEGFDVILQTSKSSEDDLQKCVGKIKQK MIKGIIMLSSPANESFFATLDGYGVPVVVIGKVEGIYQNIYSVDTDNFHDSAILTDSFIK HGRTKIACLHAPLDYHVSIDRLAGYKSSLEKQGIAINPDWVIDGGYTHESALQAACQLLS SDNPPDAVFATDSMKLLSLYRAADELNLTIPEQVAMAGYSDPMLSLILTPAPGGFDIPTR KLGEESCNLLFKCIAGKSAPHKVLVETHFSDATSLR >gi|333596725|gb|GL892087.1| GENE 281 320947 - 321861 1104 304 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2156 NR:ns ## KEGG: Ent638_2156 # Name: not_defined # Def: outer membrane protein G precursor # Organism: Enterobacter_638 # Pathway: not_defined # 1 304 1 304 304 534 88.0 1e-150 MSTLLRSAALVLCAGVSCAQATESAKHWEFNIGAMYEIENVEGQADDKDGLYEPSVWFNA TWDAWTLSLAMYQEGPVDYSSMTRGTYFDRPEFELRYRFIGTDDFTFGLTGGFRNYGYHF KDEHGAKDGSANMQRYKVQPDWDIKLTDDWRFGGWFAMYQFANDLEKTGYSDSRVETETG FTWTINETISAKVNYYLERGFNMDGSRNNGEFATQEIRAYLPISLGQTTLTPYTRLGLDR WSNWDWQDDPEREGHDFNRLGMLYAYDFSNGLSMTLEYAYEWENHDEGDSDRFHYAGVGV NYAF >gi|333596725|gb|GL892087.1| GENE 282 321927 - 323009 1239 360 aa, chain - ## HITS:1 COG:ECs1897 KEGG:ns NR:ns ## COG: ECs1897 COG3839 # Protein_GI_number: 15831151 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 610 84.0 1e-174 MAQLSLKHIQKIYDNQVHVVKDFNLEIEDKEFIVFVGPSGCGKSTTLRMIAGLEEISAGE LIIDGVCMNDVPAKSRDIAMVFQNYALYPHMTVYDNMAFGLKMQKIAPSVIEERVNWAAQ ILGLRDYLQRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL HQKLNTTMIYVTHDQTEAMTMATRIVILKDGIIQQVGAPKQVYNEPANMFVAGFIGSPAM NFIRGAIDDRYFVTETLRLEIPEDKLAVLNAQGYQRKAVVFGIRPEDILTPQRNGENITA KISVAELTGAEFMLYATVGGHELVVRAGAADDYVAGNNIGIQFDMNKCHFFDADTETAIR >gi|333596725|gb|GL892087.1| GENE 283 323023 - 323688 761 221 aa, chain - ## HITS:1 COG:ycjU KEGG:ns NR:ns ## COG: ycjU COG0637 # Protein_GI_number: 16129278 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 216 1 216 219 274 64.0 1e-73 MTLNAVVFDLDGVITDTAHLHFLAWRAVAEEIGITFDEVFNEQLKGISRMDSLQRILKHG GKEGMFSEEQLLALATKKNALYVQSLASLTQDSLLPGIRDVLADIRVAKVKIGLASVSLN APGILHALGIHQAFDFCADASRISRSKPDPEIFLAACKGLNVRPEEAIGIEDAAAGVDAI NAAGMLSVGIGPGLNHAGLQLHSTQELTWERLTAFWASRAF >gi|333596725|gb|GL892087.1| GENE 284 323678 - 325957 1946 759 aa, chain - ## HITS:1 COG:ycjT KEGG:ns NR:ns ## COG: ycjT COG1554 # Protein_GI_number: 16129277 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Escherichia coli K12 # 1 753 1 750 755 984 62.0 0 MLNQSVLTDPGFCPHSLNKYASIMACGNGYMGLRATHEEDYTQQTRGMYLAGLYHRAGRN ETTELINLPDITGIDVELDGVNFTLLSGDILEWQRELAFANGELHRNVVWRSPDGKRYRL ESRRFVSLDQLPLVAMQLSITPLDGAVQAVLKTGIDATQTNSGRQHLDEISVRVFDQHYM QGVYETQDRASEVVVSAFCQLSAKSDSCFTAKNRRLSVHHSLTISQGDTVTLEKIVWLTH RSDKSLSQESFARNALADLKVCAARGYDALLESSAYAWETVWRDARVEVASAEHQDQLAL DYAIWHLTTMTPAHDERSSIAAKGLTGEGYKGHVFWDTEIFLLPFHLFTRPQIARSLLRY RWLNLSGAREKARRNGWPGALFPWESAASGQEETPEFAAINIRTGVRQKVASALAEHHIV ADIAWAVVAYWQATHDDAFMRNEGLTLLMETASFWMGRATEINGRLEIHDVIGPDEYTEH VNNNAYTNYLAWHNVACARHFMAMFGREDARFTENAGKFLARLWLPEADAEGVIPQDDTF MAKPAIDLSRYKAKAGKQTILLDYSRAEVNEMQILKQADVVMLNYLLPERFTPEQCAANL AFYEPRTIHDSSLSKAIHGIVLARCGDTEGAYAFWRDGIAIDLGDDPHSSDDGIHAAATG AIWLGAIQGFAGLHISEGELHLAPKLPAHWQKLAFPLRWRNATMHITCESDQLTIETTAP VTLTLWGKTLHVSGRKVCAHKDFIAPVNGTATREARHDA >gi|333596725|gb|GL892087.1| GENE 285 325951 - 327006 892 351 aa, chain - ## HITS:1 COG:ycjS KEGG:ns NR:ns ## COG: ycjS COG0673 # Protein_GI_number: 16129276 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 2 350 3 351 351 562 77.0 1e-160 MSASTPLPLRVAIIGAGQVADKVHASYYATRSDVQMVAVMDSRLEQAQAFAERYAIPSAW QDAHEMLQEVKPDVVSVCSPNRFHFEHVMAALEAGCHVMCEKPPAMTPQQADEMCIAARK AGRVLAYDFHHRFALDTQLLRDAVMNGTLGEIYFTSAQALRRCGVPGWGVFTNKSLQGGG PLIDIGIHMLDAAMYVLGFPAVKRVTAHSFQRLGNRKHTGQFGEWDPAQFTVEDALFGTI EFCNGGILRLDTSFALNIREQSIMNVSFCGEKAGATLFPAHIYNDEAGVLQTLTQREEAD DRRHQRSMDAFVRHVLGESVMIADAEQGLVIQQLVAALYEAAETGESVTLC >gi|333596725|gb|GL892087.1| GENE 286 327021 - 327809 1010 262 aa, chain - ## HITS:1 COG:ycjR KEGG:ns NR:ns ## COG: ycjR COG1082 # Protein_GI_number: 16129275 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli K12 # 1 262 4 265 265 479 85.0 1e-135 MKIATQNQAFFPTAIMEKFEYIKAMGFDGYEIDGRLLVDNLDEVKAAIKATGLPVTTACG GYDGWIGDFIEERRLNGLQQIERILEALAEVGGKGIIVPAAWGMFTFRLPPMTSPRSLEG DRKAVSASLRWLDEVAARTGTTVYLEPLNRYQDHMINTLADARRYIEENDLKHVQIIGDF YHMNIEEDSLTEALHHNRDLLGHVHIADNHRYQPGSGSLDFASLFDQLRADNYQGYVVYE CRVRADDPAKAYKDSLTYLREC >gi|333596725|gb|GL892087.1| GENE 287 327827 - 328879 1157 350 aa, chain - ## HITS:1 COG:ycjQ KEGG:ns NR:ns ## COG: ycjQ COG1063 # Protein_GI_number: 16129274 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 1 350 350 640 90.0 0 MKKLVATAPRVAALVEYEDRPVAAHEVKIRARYGAPKHGTEVVDFRAASPFIDEEFNAEW QMFTPREEGAARGIEFGKFQLGNMIVGDIIECGADVTDYQIGDSVCCYGPLQETVIVNAV DNYKLRKMPQGASWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKKA GASVVIGVDPIEHRCEIARRHGADHCLNPIGTDVGLEIKKLTGKQGADVIIETSGFADAL QSALRGLAYGGTISYVAFAKPFAAGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI EETCWELLMNGYLNCEDLIDPVVTFTTSPESYMKYVDQHPELSIKMGVTF >gi|333596725|gb|GL892087.1| GENE 288 328908 - 329750 1009 280 aa, chain - ## HITS:1 COG:ycjP KEGG:ns NR:ns ## COG: ycjP COG0395 # Protein_GI_number: 16129273 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli K12 # 1 280 1 280 280 437 92.0 1e-122 MATNKRVLGRIGFYLGLALFLIITLFPFFVMLMTSFKSAKEAISLHPTILPQEWTLQHYV DIFNPLIFPFVDYFRNSMVVSLTSSIIAVFLGTLGAYALSKLRFKGRTTINASFYTVYMF SGILLVVPLFKIITALGIYDTELALIITMVTQTLPTAVFMLRSYFDTIPDEIEEAAMMDG LNRLQIIFRITVPLAISGLVSVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNTLFSTP DYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG >gi|333596725|gb|GL892087.1| GENE 289 329737 - 330576 1086 279 aa, chain - ## HITS:1 COG:ycjO KEGG:ns NR:ns ## COG: ycjO COG1175 # Protein_GI_number: 16129272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 15 279 29 293 293 439 92.0 1e-123 MLLLAPSLILLGGLVAWPMISNIEISFLRLPLNPRIDAVFVGLDNYIRILGDAAFWHSLW MTFWYTALVVLGSTGLGLAVAIFFNREFRMRKTARSLVILSYVTPSISLVFAWKYMFNNG YGIVNYLGVDLLHLYDQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLY EAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYK TAFAFNDLGKAAAISVVLFVIIFAVILLTRKKVNLNGNK >gi|333596725|gb|GL892087.1| GENE 290 330640 - 331932 1455 430 aa, chain - ## HITS:1 COG:ycjN KEGG:ns NR:ns ## COG: ycjN COG1653 # Protein_GI_number: 16129271 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 429 1 429 430 645 74.0 0 MKMPKIVLLSALVSCALLSGCKDDKASQVTIEFMHSSVEQERQAVITKLIEKFEKENPTI TVKQVPVEEDAYNTKVITLARTGALPEVIEVSHDYAKVMDKEQLLDREAIGNAIKAVGED TFYDGILRVVRTEDGTAWTGVPVSAWLSGVWYHKDALAAAGIGEPHNWEQLLKASQALND PAKKHYGIALPTAESVMTEQAFSQFALSGGANVFDASGNVKIETPEMSKALAFYRALAAN TMPGSNDVMEIKDAFMNGSAPMAVYSTYILPAVYKDGNPANLGFVVPTEKSSAVYGMITS LTITTGQTEAETQAAEKFVTWMEQAQNASDWVMMSPGAALPVNKLVVGTESWKNNDVIKA FGQLPYELIAQFPNVQVFGAVGDKNFTRMGDVTGSGIISSMVHNVTVGQKDLNATLSNSQ KKLTDLISQR >gi|333596725|gb|GL892087.1| GENE 291 331946 - 333643 939 565 aa, chain - ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 2 563 7 568 568 824 68.0 0 MENNVNAKIKKLINHIYGESFSDAHLDVLLTKLEKAAVNITEKRKSGWDEKDVVLITYAD QFSAKGEKALPVFTRFYNEWLSRTFSHVHLLPFYPWSSDDGFSVIDYHEVAHETGTWQDV AELKQSASLMFDFVCNHMSAKSEWFANYLAQKPGYEDFFISVDPETDLSAVTRPRALPLL TPFTLHDGSVRHLWTTFSEDQIDLNFASPQVLIAMVDVLLHYLMEGARYIRLDAVGFMWK IPGTTCIHLEQTHCLIQLFRAITDAVAPGTVIITETNVPHKDNISYFGNGENEAQMVYQF SLPPLVLHAVHCQDVKALCQWAGSLALPSTHTTWFNFLASHDGIGLNPLRGILPESEILS LVDKLQQEGALVNWKNNPDGTRSPYEINVTYLDALSLRDSSDDERIARFILAHAVLLSFP GVPAVYIQSILGSRNDYEGVERLGYNRAINRKKYTAGQVDRELNNKKSIRYQIYSRLSEL IAIRRGESAFHPDGQAIFDAMGEHILKIVRVAKNGERITALFNFSNKMQTVYEQTHFGKE LLSGQDISGTELTLNPWQVMWIKEN >gi|333596725|gb|GL892087.1| GENE 292 333839 - 334063 315 74 aa, chain - ## HITS:1 COG:no KEGG:ECL_01779 NR:ns ## KEGG: ECL_01779 # Name: pspD # Def: phage shock protein D # Organism: E.cloacae # Pathway: not_defined # 1 73 1 73 73 107 91.0 2e-22 MKQNWQQAGQKVKPGLKIAGKLVLMTALRYGPAGVAGWAIKSVARKPVRMLLAVALEPLL QKLAKRVSRRYFSR >gi|333596725|gb|GL892087.1| GENE 293 334076 - 334435 429 119 aa, chain - ## HITS:1 COG:STM1688 KEGG:ns NR:ns ## COG: STM1688 COG1983 # Protein_GI_number: 16765031 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 119 1 119 119 187 76.0 5e-48 MAGLNLNKKLWRIPQQGMVRGVCAGLAHYLDVPVKLVRVVTVLSIFFGLAFITLVAYIIL SFVLDPMPEGELDAENTPTSSDLLNAVDEQLSAGEKRLREMERYVTSDTFTLRSRFRQL >gi|333596725|gb|GL892087.1| GENE 294 334435 - 334659 260 74 aa, chain - ## HITS:1 COG:no KEGG:EFER_1657 NR:ns ## KEGG: EFER_1657 # Name: pspB # Def: phage shock protein B # Organism: E.fergusonii # Pathway: not_defined # 1 74 1 74 74 119 89.0 5e-26 MSALFLAIPLTIFVLFVLPIWLWLHYSNRSSRGELSQSEQQRLAQLSAEANKMRERIQAL EAILDAEHPNWRER >gi|333596725|gb|GL892087.1| GENE 295 334709 - 335377 905 222 aa, chain - ## HITS:1 COG:STM1690 KEGG:ns NR:ns ## COG: STM1690 COG1842 # Protein_GI_number: 16765033 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Salmonella typhimurium LT2 # 1 222 1 222 222 258 90.0 7e-69 MGIFSRFADIVNANINSLLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR IEQATSQLNEWQEKAELALRKDKEDLARAALIEKQKLSDMVTTLEHEVTLVDDTLTRMKK EIGELENKLSETRARQQALALRHQAASSSRDVRRQLDSGKLDEAMARFESFERRIDHMEA EAESHSIGKQKTLDQQFADLKADDEISEQLAALKAKMKQDNQ >gi|333596725|gb|GL892087.1| GENE 296 335544 - 336521 861 325 aa, chain + ## HITS:1 COG:ECs1880 KEGG:ns NR:ns ## COG: ECs1880 COG1221 # Protein_GI_number: 15831134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 324 6 330 330 529 83.0 1e-150 MAEYKDNLLGEANSFLEVLEQVSRLAPLNKPVLIIGERGTGKELIANRLHFLSGRWDGPF ISLNCAALNENLLDTELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKL LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVAEDKFRADLLDRLAFDVVQLPPLR ERRSDIMLLADQFAIQMCRELGLPLFPGFSEQATETLLGYHWPGNIRELKNVVERSVYRH GTSETELDNIILDPFRREVKQPPASTTLQQDPALPLDLRQFQHQQEQQLLEQSLKEAKYN QKRAAELLGLTYHQLRALLKKHQMR >gi|333596725|gb|GL892087.1| GENE 297 336610 - 338250 1706 546 aa, chain + ## HITS:1 COG:STM1692 KEGG:ns NR:ns ## COG: STM1692 COG4166 # Protein_GI_number: 16765035 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 546 1 549 549 961 88.0 0 MRLVLSSLFALGLFSNLAFAAPDRAVPPDIRDSGFVYCVSGQVDTFNPQKAGSGLIVDTL AAQLYDRLLDVDPYTYRLVPELAESWEVMDNGATYRFRLRDDVAFQHTPWFTPTRKLNAD DVVFTFQRIFNRNHPWHNVNGDNFPYFDSLQFADTVKSVGKLDNRTVEFRLTRPDASFLW HLATHYASVMSAEYADQLTKKDRQERLDREPVGTGPFQLAEYRAGQYIRLQRHDHFWRGK PLMPQVIVDLGSGGTGRLSKLLTGECDVLAWPAASQLTILRDDPRLRLTLRPGMNIAYLA FNTDKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDGEAKITEYNP AKAREQLKALGAENLTLQLWVPTSSQAWNPSPLKTAELLQADMAQVGVKVIIVPVEGRFQ EARLMDMNHDLTLAGWSTDSNDPDSFFRPLLSCAAINSQTNYAHWCNREFDAVLQKALAS QQLASRIEAYDEAQNILARELPVLPLASSLRLQAYRYDIKGLVLSPFGNASFAGVTREKE QEVKKP >gi|333596725|gb|GL892087.1| GENE 298 338247 - 339212 584 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 229 36 3e-58 MIIFTLRRLLLLLVTLFFLTFVGFSLSYFTPHAPLQGSSLWDAWLFWFNGLLHWDFGVSS INGQLISEQLKVVFPATMELCILAFGFALMVGIPVGMLAGIYRNKWQDKFISALALIGFS IPVFWLALLLTLFFSLTLGWLPVSGRFDLLYNVQTVSGFAIVDAWLSDSVWRDEMIVSAL RHMVLPVLTLAVAPTTEVIRLMRISTIEVFDQNYVKAAATRGLSRLTILRRHVLHNALPP VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWMINAIRQQDYAAISAGVMVIGSLVIIVNV VSDILGAMANPLKHKEWYALR >gi|333596725|gb|GL892087.1| GENE 299 339199 - 340089 978 296 aa, chain + ## HITS:1 COG:sapC KEGG:ns NR:ns ## COG: sapC COG4171 # Protein_GI_number: 16129253 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Escherichia coli K12 # 1 296 1 296 296 496 88.0 1e-140 MPYDNVYSEKRTPGALRTVWRNFYGDTTAMIGFYGCIGLVLLCVFGSWFAPYGIDQQFLG YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAAAICGLALGIFA GSTHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPHLTHAMFAVWLAILPRMVRSVYSL VHDELEKEYVVAARLDGATTFNILWFAVLPNIAAGLVTEITRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMVSVLLVNLLGDGIRRAINAGVQ >gi|333596725|gb|GL892087.1| GENE 300 340089 - 341081 472 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 321 33 324 329 186 37 3e-45 MPLLDIRNLTIEIKTGEGWVKAVDRISITLAEGEIRGLVGESGSGKSLIAKAICGVAKDN WRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGKQLMQNIPGWT YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTDGECQKVMIAIALANQPRLL IADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSKWADKIDVMYCGQTVET APSEDLVTTPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLESLPIGCRLGPRCPY AQRKCIETPRLTGPKNHLFACHFPLNMERE >gi|333596725|gb|GL892087.1| GENE 301 341071 - 341889 434 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 256 3 263 329 171 36 8e-41 RESEMVETLLEVRNLSKTFRYRTGLFHRQTVEAVKPLSFMLREKQTLAIIGENGSGKSTL AKMLAGMVEPSGGEILIDDHPLEFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR LNTDLEPEARRKRIVETLRLVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE ALAALDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTA DVLASPLHDLTKRLIAGHFGEALTADAWRKDR >gi|333596725|gb|GL892087.1| GENE 302 341886 - 342476 488 196 aa, chain - ## HITS:1 COG:AGl1093 KEGG:ns NR:ns ## COG: AGl1093 COG1309 # Protein_GI_number: 15890665 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 194 7 197 201 172 46.0 3e-43 MATKRRAETAQENREKMIQAARRAFAEKGYAAASMDELTASVGLTRGALYHNFTDKKGLL AAVVAQIDGEMAANAKAVAAAAEDDWERLLAEGIAYIKMALVPEVQRIVLLDGPAVLGDP AQWPSQNSCLESTRQTIEKMIECKVLKKMDARVAAHLLNGAALNAALLIAASDDPQKTLP HAIEVFTLLASGLRNG >gi|333596725|gb|GL892087.1| GENE 303 342554 - 343009 315 151 aa, chain + ## HITS:1 COG:SMa0089 KEGG:ns NR:ns ## COG: SMa0089 COG0251 # Protein_GI_number: 16262498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Sinorhizobium meliloti # 14 150 2 138 138 228 80.0 3e-60 MLLPLRNHNNTSDRKGKTMHSRDPVFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRSD GTPEPDFPAQVQLAFDNLRATLAAAGCTFDDLIDVTTFHTDPENQFPAIMEAKKLAFPHP PYPNWTAIGVNWLAGFDFEIKVIARIPSPAK >gi|333596725|gb|GL892087.1| GENE 304 343295 - 344083 1062 262 aa, chain + ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 485 95.0 1e-137 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSSIV LECDVAQDESIDGMFAELAKAWPKFDGFVHSIGFAPGDQLDGDYVNAVTRDGFKIAHDIS SYSFVAMAKSCRAMLNPGAALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI SGEVVHVDGGFNIAAMNELEIK >gi|333596725|gb|GL892087.1| GENE 305 344231 - 345217 684 328 aa, chain + ## HITS:1 COG:ZyciW_1 KEGG:ns NR:ns ## COG: ZyciW_1 COG4950 # Protein_GI_number: 15801889 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 197 27 223 226 265 67.0 7e-71 MEQRRFSGKGHWYHETQSNHSQRDVLPLVPEAANVDDRFLLDLALPETILARCAGWLTPA RNLCHLLFPLETPVNRLHTLSAYDRLSTALTVAQACGVQRLCNHYAALLAPLPGPDSSRE SNRRLAEITQYARQLASSPDVIDNKAQNQLDEVGLTTYDIVLINQIIGFVGFQARVVAAF QALLGHPVRWLPGHHIQPHTLPVSFSKWTATLPPVELKYASTLQLEALSRWQAEPALEAL TPVLCHEPMLLNMTGEILVNLPRSEGQASSMLTAAHALLVASPDRFSAAQLTPLTESGLS PEKVISLLTRSAFYGWLDRLRMALGKEE >gi|333596725|gb|GL892087.1| GENE 306 345306 - 347240 1983 644 aa, chain + ## HITS:1 COG:STM1702 KEGG:ns NR:ns ## COG: STM1702 COG4776 # Protein_GI_number: 16765046 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Salmonella typhimurium LT2 # 1 644 1 644 644 1184 90.0 0 MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSVVPDHPLLKDAIPCRAARGVEH DFVEGDWAVAEMRRHPLKGDRGFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT EMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEETADGKLHLTVAIADPTAWIVEGSK LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRAHEVRPVLACRMTIAADGTIEEDIEF FAATIESKAKLAYDNVSDWLENTGSWKPESDTIAAQIRLLHRVCLSRSEWRQTHALVFKD RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD PANTEALAALLKTHDVHVDPEEVLTLQGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESVARPQDDTTLQMAERRRLNRM AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA >gi|333596725|gb|GL892087.1| GENE 307 347484 - 348902 1292 472 aa, chain + ## HITS:1 COG:STM1703_2 KEGG:ns NR:ns ## COG: STM1703_2 COG2199 # Protein_GI_number: 16765047 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Salmonella typhimurium LT2 # 218 399 1 182 182 318 80.0 2e-86 MGTHSPWWRLTADSNALHLAASESADIIQVVALDDEQAALIRQLTVITSSIAMTLPLYGV EVPVHLVGRKINKNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEANSVIVILDQNGNI QRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNITGFFRNGSSYEVERWIKTRK GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTDTITGLPNRNAIHE LISDSITARGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAILSCLDEGQTLARL GGDEFIVLATDTSQGALEAMASRILTRLRQPFRIGLIEVYTGCSLGIALAPQHGNDRESV IRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDNDQLLIHYQPKMTWR GEVRSLEALVRWQSPERGLIPPMEFISYAEESGLIVPLGRWVMLDVVRQVAK >gi|333596725|gb|GL892087.1| GENE 308 348877 - 349275 258 132 aa, chain + ## HITS:1 COG:STM1703_3 KEGG:ns NR:ns ## COG: STM1703_3 COG2200 # Protein_GI_number: 16765047 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 7 132 126 251 251 217 86.0 4e-57 MWCVRWQNEELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIH KQSISQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGYLFAKPMPAAAFE RWLKRYQARHVR >gi|333596725|gb|GL892087.1| GENE 309 349272 - 350141 660 289 aa, chain - ## HITS:1 COG:XF1115 KEGG:ns NR:ns ## COG: XF1115 COG1024 # Protein_GI_number: 15837717 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Xylella fastidiosa 9a5c # 44 285 44 288 290 143 36.0 3e-34 MTVINQTTCTLFTDAERFTQLAAYYEAERRTVWMMLRAAPRPCFNHALIEEIMNLSWLVR QSGFIVDFWVTGSLVPEIYNTGGDLHFFVECIKNNRREALRAYARACVDCVHAASRGFDT GAVTLAMVEGSALGGGFEAALAHHFILAQRDARLGFPEIAFNLFPGMGGYSLVARRAGMK MAEELIYKGESHTAEWYEQHGLVDVLFEPLQSYMSVRTFIDTLQPKLNGVRAMLRARTRV LPLPRSELMDITEDWVDAAFCLEPKDIAYMERLVMLQTRHQATGLHKAS >gi|333596725|gb|GL892087.1| GENE 310 350333 - 350515 145 60 aa, chain + ## HITS:1 COG:no KEGG:ECL_01752 NR:ns ## KEGG: ECL_01752 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 60 1 60 60 90 85.0 2e-17 MSNIDAAAVAQRIDTVLDILVAGDYHSAIRNLEILKSELLAENGADNAPGSTQPKAPWEV >gi|333596725|gb|GL892087.1| GENE 311 350583 - 351305 739 240 aa, chain + ## HITS:1 COG:ECs1857 KEGG:ns NR:ns ## COG: ECs1857 COG1349 # Protein_GI_number: 15831111 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 236 11 247 249 375 81.0 1e-104 MVIDQGRVSVVDLAKATGVSEVTIRQDLNLLEKQSYLRRAHGYAVPLDSEDVETRMMNNY ALKRELAEFAASLVNNGETVFIENGSSNALLARTLAEQKDITIITVSSYIAHLLKETRCE VILLGGIYQKKSESMVGPLTRQYVQQVHFSKAFIGIDGWQPETGFTGRDMMRTDVVNAVL AKECEAIVLTDSSKFGAVHPYTMGPASRFSRVITDERLRDEYRQQLEQDGLTVDIVKKTA >gi|333596725|gb|GL892087.1| GENE 312 351568 - 351786 243 72 aa, chain + ## HITS:1 COG:no KEGG:ECL_01750 NR:ns ## KEGG: ECL_01750 # Name: not_defined # Def: osmotically inducible lipoprotein B # Organism: E.cloacae # Pathway: not_defined # 1 72 1 72 72 69 98.0 4e-11 MTFTSKKLAAAVLAITVAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA AVGGIIGHQVGK >gi|333596725|gb|GL892087.1| GENE 313 351891 - 352217 394 108 aa, chain - ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 155 85.0 1e-38 MRDANSRLVYSTDTGRIEEPKEKAERPKGDGIVRIQRQTSGRKGKGVCLVTGLDLDDADL AKLAAELKKKCGCGGAVKDGIIEIQGDKRDLIKTLLEAKGMKVKLAGG >gi|333596725|gb|GL892087.1| GENE 314 352217 - 352954 614 245 aa, chain - ## HITS:1 COG:ECs1854 KEGG:ns NR:ns ## COG: ECs1854 COG0284 # Protein_GI_number: 15831108 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 385 83.0 1e-107 MTSVTSSTSRVVTDSPVVVALDYNNRDAALAFVEGIDPRDCRLKVGKEMFTLFGPQIVRD LHQRGFDVFLDLKFHDIPNTTAHAVAAAAELGVWMVNVHASGGARMMTAAREALVPFGTD APLLIAVTVLTSMDESDLRDLGVTLSPAGHAERLARLTQQCGLDGVVCSAQEAVRFKSEL GRDFKLVTPGIRPAGSATGDQRRIMTPEQALSAGVDYMVIGRPVTQAANPAEALKAINAS LKKGA >gi|333596725|gb|GL892087.1| GENE 315 353139 - 354308 1214 389 aa, chain - ## HITS:1 COG:ECs1853 KEGG:ns NR:ns ## COG: ECs1853 COG2956 # Protein_GI_number: 15831107 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Escherichia coli O157:H7 # 10 388 10 388 389 664 90.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQTKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAA GLYDRAEDMFSQLVDETDFRIGALQQLLQIYQATSDWQKAIDTAERLVKLGKDKQRVEIA HFYCELALQQMGSDDMDKAMALLKKGAAADRNSARISIMMGRVFMANGDYAKAVESLLRV IDQDKELVSETLEMLQTCYQQLDKQDEWVAFLRRCVEENTGATAELMLSDVVEQHEGSDT AQVYITRQLQRHPTMRVFHKLMDYHLNDAEEGRAKESLMVLRDMVGEQVRSKPRYRCQKC GFTAYSLYWHCPSCRAWSTIKPIRGLDGQ >gi|333596725|gb|GL892087.1| GENE 316 354315 - 354623 206 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein [Haemophilus influenzae R2866] # 1 89 2 90 97 84 35 2e-14 MKYLLIFLLVLAIFVISVTLGAQNDQQVSFNYLLAQGEYRVSSLLAVLFAAGFVIGWLVC GLFWLKVRVSLVRAERKIKRLEHQLTPATDIPASSGVPVVKE >gi|333596725|gb|GL892087.1| GENE 317 354772 - 355539 572 255 aa, chain - ## HITS:1 COG:STM1710 KEGG:ns NR:ns ## COG: STM1710 COG0671 # Protein_GI_number: 16765054 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 251 1 251 254 385 82.0 1e-107 MLSIARRTAAGAAVLLVIPLVVWFSGWMWQPEQNETWLKALYWITETVTQPWGIITHVLL CAWFLWCLRFRLRAALVLFAILGGAILIGQGVKSWVKDRVQEPRPFVVWLEKTHHVPVDE FYNLKRKDRGALVKEQLAEQQDIPTFLRKHWQKETGFAFPSGHTMFAASWALLGVGLLWP RRRTLTIAILLVWASGVMGSRMLLGMHWPRDLVVATLISWVLVTLASWLAQRFCGPLTPP PEEKEEIAERESGGI >gi|333596725|gb|GL892087.1| GENE 318 355737 - 356327 717 196 aa, chain + ## HITS:1 COG:STM1711 KEGG:ns NR:ns ## COG: STM1711 COG0807 # Protein_GI_number: 16765055 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Salmonella typhimurium LT2 # 1 196 1 196 196 382 94.0 1e-106 MQLKRVAEAKLPTPWGDFLMVGFEELATGQDHVALVFGDISGQTPVLSRVHSECLTGDAL FSLRCDCGFQLEAALSHIAEEGRGVLLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ LGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPKNA HYLDTKAAKMGHLLSE >gi|333596725|gb|GL892087.1| GENE 319 356365 - 359040 2743 891 aa, chain - ## HITS:1 COG:acnA KEGG:ns NR:ns ## COG: acnA COG1048 # Protein_GI_number: 16129237 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 890 1 890 891 1640 90.0 0 MSLTLREASKDTLQAENKTWRYYSLPLAARTLGDISRLPKSLKVLLENLLRWQDGDSVTE EDIQALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPL SPVDLVIDHSVTVDHFGDDDAFGENVRLEMERNHERYVFLKWGQQAFSRFSVVPPGTGIC HQVNLEYLGKAVWSELQDKEWVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQ PVSMLIPDVVGFKLTGKLPEGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADR ATIANMAPEYGATCGFFPIDSVTLEYMRLSGRSEEQVALVEAYTKAQGMWRNPGDEPVFT STLELDMGTVEASLAGPKRPQDRVALSNVPKAFAASNELEVNAAQKDHRPVDYVLNGHQY QLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVELGLKPQPWVKASLAPGSKVVSDYL AQARLTPYLDELGFNLVGYGCTTCIGNSGPLPEPIEVAIKQGDLTVGAVLSGNRNFEGRI HPLVKTNWLASPPLVVAYALAGNMNINLATDPIGHDCKNEPVYLKDIWPSSREIARAVEK VSTEMFRKEYAEVFEGTEEWKAIDVVGSDTYDWQNDSTYIRLSPFFDEMLAEPAPLKDIH GARILAMLGDSVTTDHISPAGSIKADSPAGRYLQSRGVERRDFNSYGSRRGNHEVMMRGT FANIRIRNEMVPGVEGGMTRHLPDTEVISIYDAAVKYQQEGTPLAVIAGKEYGSGSSRDW AAKGPRLLGVRVVIAESFERIHRSNLIGMGILPLEFPQGGTRKTLGLTGEEQIDISGLQN LQPGKTVPVKLTRADGTTEVLECRCRIDTATELTYYQNDGILHYVIRKMLD >gi|333596725|gb|GL892087.1| GENE 320 359441 - 359605 73 54 aa, chain - ## HITS:1 COG:no KEGG:ECL_01741 NR:ns ## KEGG: ECL_01741 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 11 54 1 44 44 66 90.0 4e-10 MTVRTEARKEMCQLRDNAHKARKAPATSVPASWKLTPQQQAFIDVFAEDEPKKQ >gi|333596725|gb|GL892087.1| GENE 321 359614 - 359742 63 42 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1434 NR:ns ## KEGG: EC55989_1434 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 42 13 54 54 64 83.0 1e-09 MPSGSEEPQRDPALKRKAWLAVFLGSALFWVVVALLVWNYWG >gi|333596725|gb|GL892087.1| GENE 322 360091 - 361065 918 324 aa, chain - ## HITS:1 COG:STM1713 KEGG:ns NR:ns ## COG: STM1713 COG0583 # Protein_GI_number: 16765057 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 324 1 324 324 626 96.0 1e-179 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFARSGKHLTQVT PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPGVIKGFIERYP RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPDHPLAG KGEVTIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV GVIASMAVDPVSDPDLVRLDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DTAVALRSNEDIEEMFKDIKLPAK >gi|333596725|gb|GL892087.1| GENE 323 361252 - 363849 2894 865 aa, chain - ## HITS:1 COG:STM1714_1 KEGG:ns NR:ns ## COG: STM1714_1 COG0550 # Protein_GI_number: 16765058 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Salmonella typhimurium LT2 # 1 592 1 592 592 1100 92.0 0 MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK KDERSALVNRMGVNPWHNWDAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA WHLREVIGGDDKRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKVARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDANVTTPGGDALPLQVSH HHDKPFRPENRDQTMAAVALLEKARYQVLDREDKPTSSKPGAPFITSTLQQAASTRLGYG VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIEDNFGKKYLPDSPNQYASKEN SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF RLKARGRILRFDGWTKVMPALRKGDEDRTLPSVNKGDELSLVDLVPAQHFTKPPARFSEA SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEANFRELMNY DFTAQMEDSLDEVASHKAEWKKVLDSFFSDFTNQLEKAEKDPEEGGMLPNQMVLTSIDCP TCGRKMGIRTATTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR RCKKCGTAMDSYLIDPKRKLHVCGNNPTCDGYAIEEGEFRIKGYDGPIVECEKCGSEMHL KMGRFGKYMACTNDDCKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV AAEKEGKATGWSAFFVDGKWVEGKK >gi|333596725|gb|GL892087.1| GENE 324 364248 - 364499 329 83 aa, chain + ## HITS:1 COG:no KEGG:ECL_01737 NR:ns ## KEGG: ECL_01737 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 83 1 83 83 164 100.0 1e-39 MQNTTQPIDRASLLIEANKLIRDHEDTLAGIEATGVEQRNGVLVFSGEYFLDEQGLPTPK STAVFNMFKYLAHTLSEKYHLVD >gi|333596725|gb|GL892087.1| GENE 325 364535 - 365581 1101 348 aa, chain - ## HITS:1 COG:STM1716 KEGG:ns NR:ns ## COG: STM1716 COG0616 # Protein_GI_number: 16765060 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Salmonella typhimurium LT2 # 1 348 1 348 348 488 80.0 1e-138 MELLSQYGLFLAKIATVVIAIAVIAVLIVNLTQRKRQRGELRITRLSEQYKEMQEEMSLA LLDDHQQKLWLKAQKKKHKQDAKAAKAKAKLATPQADAKPRVYVLDFKGSMDAHEVSSLR EEVTAVLAVATAQDQVVVRLESPGGVVHGYGLAASQLQRLREKQIPLTVAVDKVAASGGY MMACVADKIVAAPFSIIGSIGVVAQIPNFNRFLKNKEIDIELHTAGQYKRTLTLLGENTE EGRQKFREDLNETHHLFKDFVHRMRPMLDIEQVATGEHWYGTQAQEKGLVDEVGTSDDLL INLMEGRELVGVRFTRRKRLMDRFTNSAAESADRLLLRWLQRGQKPLL >gi|333596725|gb|GL892087.1| GENE 326 365834 - 366595 598 253 aa, chain + ## HITS:1 COG:STM1717 KEGG:ns NR:ns ## COG: STM1717 COG1028 # Protein_GI_number: 16765061 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Salmonella typhimurium LT2 # 1 253 1 253 253 417 82.0 1e-116 MHYQPQKNLLQNRIILVTGASDGIGREAALTYSEYGASLILLGRNEEKLKAVAREIENAS GTPTPWYTLDLLTCTPASCQALAQRISTHYPRLDGVLHNAGLLGEVRPMDEQDPEIWQQV MQVNVNGTFFLTQALLPLLLNSDSGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA EEYQSRHLRVNCINPGGTRTKMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMT FDAQPGRKPGISQ >gi|333596725|gb|GL892087.1| GENE 327 366592 - 367182 651 196 aa, chain + ## HITS:1 COG:btuR KEGG:ns NR:ns ## COG: btuR COG2109 # Protein_GI_number: 16129231 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 349 85.0 2e-96 MSEDRHQQRQQRLKEQVDARVVAAQDERGIVIVFTGNGKGKTTAAFGTATRAVGHGQKVG VIQFIKGEWPNGERNLLEPHGVEFQVMATGFTWDTQNRETDTAACLAVWEHAKRMLSDPS LNMVLLDEITYMVAYDYLPLEEVLEALRNRPAHQTAIVTGRGCHRDILELADTVSELRPV KHAFDAGIKAQIGIDY >gi|333596725|gb|GL892087.1| GENE 328 367218 - 368093 1028 291 aa, chain - ## HITS:1 COG:STM1719 KEGG:ns NR:ns ## COG: STM1719 COG1187 # Protein_GI_number: 16765063 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Salmonella typhimurium LT2 # 1 291 1 291 291 516 94.0 1e-146 MSEKLQKVLARAGHGSRREIEAIIEAGRVSVDGKIATLGDRVEIVPGLKIRIDGHLISVK ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDENKLRDLSRGVQLEDGPAAFKTIKFTGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDILLPKGLPRGGYTELDLTQTNYL RDLVGLTPETTSKVAVEKDRRRMKANQIRRAVKRHSQVSSNRRSGSRNNNG >gi|333596725|gb|GL892087.1| GENE 329 369839 - 370306 204 155 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKLPAAFTKEIKAEFKIQRDQNVADYIESHLTDVFSISDFYPVVLIKLQTAIQDGYEIA EFERQPFYNIGDPAMRIVMNKKQQEIDTERRSLTEAAEAALMASLEAQAEELYQQMVAEE ERRKRAEAAAQAAAETEALTFSGRLRASFVKGSHV >gi|333596725|gb|GL892087.1| GENE 330 370299 - 370733 188 144 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFEPYAQKRNPAKLAQRSASDYRKMMIAEQDGRDFITGSPLTDPVIDHDHRTGHCRLILN RVTNAIEGDFNLILSRVAYREDFTPLLWEVYFGFHDTLYDELYNAALERRNGYLKEHHFR FILKQFAVYYAVRFDHLNHLEYYR >gi|333596725|gb|GL892087.1| GENE 331 370730 - 370915 115 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTKAEKSLSWLRSYWNNQPPAEIAKSEIQLFSKEVNKLTIGEFYQWLLSEGYIFKNKDT K >gi|333596725|gb|GL892087.1| GENE 332 370915 - 371070 97 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLQLKIARDLLTWIDASKGDDSRPTFIIKTLRKVMTNEETNESKATNRKAD >gi|333596725|gb|GL892087.1| GENE 333 371036 - 372265 411 409 aa, chain + ## HITS:1 COG:no KEGG:Reut_A3313 NR:ns ## KEGG: Reut_A3313 # Name: not_defined # Def: hypothetical protein # Organism: R.eutropha # Pathway: not_defined # 91 365 125 404 444 157 34.0 1e-36 MNPKLQIEKLIDHLQKQKYAFISAQGKILLHHIPTNTNHGLDILEREYYLSTGEQWRRSY LNLLWDHIPFIKVNEFNPTQPYGIDQNGTLNTFRRWRSDKTPAADLTLWHSYLARLFPDQ TDRATVSAYMAHMFQHPEQRPSWHIVIPSDTGTGKGFLFNQILSPLLMHQTTLYSNYSTL TSVHNDAMARTILILFDDPPPATRNMADRLKSIQTEPVIEINRKYEQPRKVPTFTRFFTF SNSESPIEVEANDRRHYCTHYIRHKVSREETAEFITCLAEWLAVGGLEAVHAWLMAYPLS EFTPYRPPYSVALERMKQASITEEQNEAEIFTGENPAFAFKAFHDACPSFPRPQDASQWL RDNGYVSARVNTRAGLKSVWYRAPQDGSGKIPESALSWFVDKYYPTPTK >gi|333596725|gb|GL892087.1| GENE 334 372628 - 373044 255 138 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGRTHAAYVNYFQNGRKAHRLAEVERQLAAETSHQQEKRQLEAEARSAENIADHFPRVI PDTPLIEMHPGYYIHRLEWEAHRDGLSVVTVTDERTTRDPELVSYQWNHFVITHRSPWAL EDYRIRYYPFSLPEHVAK >gi|333596725|gb|GL892087.1| GENE 335 373180 - 373737 541 185 aa, chain + ## HITS:1 COG:DRC0005 KEGG:ns NR:ns ## COG: DRC0005 COG1961 # Protein_GI_number: 10957532 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Deinococcus radiodurans # 4 175 7 179 185 127 42.0 1e-29 MANIGYIRVSTDKQYTERQLDGVTLDEKFEEKVSGKNTNRPKLQEMIAYVRKGDVIHVHS LDRLGRNLRDVLDIIEHVKAKGASVQFHKEGITAGAEANAASNLMLNIFAAMSQMEREMM LERQAEGYAAAKAAGRKGARGNGAAVDRVGIVSALAAGQSIRTIAKDFNVSTSTVQRIKT EQAAA >gi|333596725|gb|GL892087.1| GENE 336 373636 - 373848 155 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCVAPLLEMFNTISATHPIPAVEFLKYQWLVASKGILLGGGLFGLDTLHGAGGHVEIFRY GSDRLTSGKC >gi|333596725|gb|GL892087.1| GENE 337 373905 - 374330 173 141 aa, chain - ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 140 1 140 141 214 78.0 3e-56 MTDITIYHNPACGTSRNTLALIQNSGVEPTVILYLETPPDRDKLKELISAMGISVRALLR KNVEPYEQLGLTEDRFTDEELIEAMLSHPILINRPIVVTPLGTRLCRPSEVVLDILPNPQ KGEFIKEDGEKVVGKDGKRLI >gi|333596725|gb|GL892087.1| GENE 338 374346 - 375635 479 429 aa, chain - ## HITS:1 COG:arsB KEGG:ns NR:ns ## COG: arsB COG1055 # Protein_GI_number: 16131374 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Escherichia coli K12 # 1 429 8 436 436 607 86.0 1e-173 MLLAGAIFALTIFFVIWQPRGLSIGWTASIGAVLALVTGVIQISDIPVVWHIVWNATAAF IAVIIISLLLDESGFFEWCALHVARWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTP IVIAMLLALGFSKETTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFKLGFSDYASVMV PVDLAAIAATLAVLHLFFRKDIPAVYELSRLKAPAEAIKDLATFRTGWIVLLLLLIGFFV LEPLGIPVSAIAAAGALILFLVAKRGHSINTGKVLRGAPWQIVVFSLGMYLVVYGLRNAG LTEHLSGVLNQLADRGIWAATLGTGFLAAFLSSIMNNMPTVLIGALSIDGSMASGIIKEA MIYANVIGCDLGPKITPIGSLATLLWLHVLEQKSIKISWGYYFRVGVIMTLPVLFVTLSA LALRLSFSL >gi|333596725|gb|GL892087.1| GENE 339 376536 - 376793 85 85 aa, chain + ## HITS:1 COG:PA2280 KEGG:ns NR:ns ## COG: PA2280 COG0431 # Protein_GI_number: 15597476 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Pseudomonas aeruginosa # 1 85 146 230 230 135 74.0 2e-32 MRVLGRWMRMFTIPNQSSVAKAWQEFDDDGRMKPSSYYDRIVDVMEELFKITLILKNHTE YLADRYSERKENHEQLSIRVNQRKI >gi|333596725|gb|GL892087.1| GENE 340 376850 - 378502 149 550 aa, chain - ## HITS:1 COG:no KEGG:Shal_4066 NR:ns ## KEGG: Shal_4066 # Name: not_defined # Def: integrase family protein # Organism: S.halifaxensis # Pathway: not_defined # 213 546 242 583 587 132 31.0 4e-29 MRNRVYNKTPRFTTKRGNVYYINFRLPDGTFFRRSLGTDSLQAVGVTMSRLSAYIPLVQN GSLSIEQFKMHIDGFREATQRDFDTYLLDWLRMGVDEAKRMPELGRMQRKIDPDAAISPT ANVTEAKGRAEIHLNRVYNGDDSTARMLLATLLMKKVSFDQRDVEQAYDVAGQIDLHQAM LHQAYDAFYSGDLVRYRSLVEEMQFKLTEAERLKKPAAKHAVAPTVESESNDTPLLSVSW KMFTTEKGKDWVAAVANENQRFYNVLLHVIGDLPVGVITKQHIRQTITIIENLPRRNKKP YSEMTLTECIDFDVPEEDLMSSANVQKHLKIYSSFFKVFLKDEKDILEKAPTEGIKYEVT ENKGGSYSKPEMQRLVTYLNTCKDWRRDYFLTLIYTGARRGEIAAIRKEHIREDEETRRW YVFIDGGKTEQAVRQIPLNKTSEKLLLARVKSLKPTDPVFGDLPTYEQIGLEWNSIMADC NIQKFNEFGQKRVIHALRHTFISEAMTKAMPVMVQFCVGHSRTQSLGITARYTHRPPLRD LLPVVDGINW >gi|333596725|gb|GL892087.1| GENE 341 378652 - 379272 831 206 aa, chain - ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 206 13 218 218 394 93.0 1e-110 MSQFFYIHPDNPQPRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKGAMERICRIRQLP DGHNFTLMCRDLSELSTYAYVDNVAFRLIKNNTPGNYTFILKGTKEVPRRLLQEKRKTIG MRVPSNPIAQALLETLGEPMLSTSLMLPGSEFTESDPEEIKDRLEKVVELIIHGGYLGQQ PTTVVDLTEDAPEVIREGVGDVKPFL >gi|333596725|gb|GL892087.1| GENE 342 379269 - 380162 614 297 aa, chain - ## HITS:1 COG:ECs1838 KEGG:ns NR:ns ## COG: ECs1838 COG0613 # Protein_GI_number: 15831092 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Escherichia coli O157:H7 # 5 297 1 293 293 491 83.0 1e-139 MGSALSDTTYAVIYDLHSHTQASDGLLTPEALVHRAVEMRVGTLAITDHDTTDGIPAARA EIARSGLALNLVPGVEISTVWENHEIHIVGLNIDTEHPAMRAFLQEQKTRRNQRAEMIGE RLEKAHIPGALEGAQKLANGGAVTRGHFARFLVETGKATTMANVFKKYLARGKTGYVPPQ WCTIKQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLLAHFAECGGEAMEVAQCQQAPNER SQLATYARQFGLLGSQGSDFHQPCAWIELGRKLWLPAGVEPVWQLWEQPQQIEEREV >gi|333596725|gb|GL892087.1| GENE 343 380428 - 381990 1818 520 aa, chain + ## HITS:1 COG:STM1723 KEGG:ns NR:ns ## COG: STM1723 COG0147 # Protein_GI_number: 16765067 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 891 86.0 0 MQTAKPHLELLTCEAAYRHNPTALFHQVCGARPATLLLESADIDSKDDLKSLLLVDSALR ITALGDTVTIKALSDNGASLLPLLDAALPSGIENERHPDLRILHFPPVSQLLDEDARLCS LSVFDAFRLLQNLVTVPEDEREAMFFGGLFAYDLVAGFEDLPETEQGNRCPDYCFYLAET LLVIDHQKKYTRIQASLFTPSASEKNRLEQRIAQLQQQMTEAPPALPVQRVEKMTCDVNQ TDDQYGAVVRQMQKAIRAGEIFQVVPSRRFALPCPSPLAAYDVLKKSNPSPYMFFMQDND FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSFVMHLVSRVVGELRHDLDVLHAYRAC MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIATV QAGAGIVLDSVPQSEADETRSKARAVLRAIATAHHAQEIF >gi|333596725|gb|GL892087.1| GENE 344 381990 - 383585 1829 531 aa, chain + ## HITS:1 COG:ECs1835_2 KEGG:ns NR:ns ## COG: ECs1835_2 COG0547 # Protein_GI_number: 15831089 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 197 531 1 335 335 555 91.0 1e-158 MADILLLDNIDSFTYNLADQLRANGHNVVIYRNHVPAQTLIDRLATMQNPVLMLSPGPGA PSEAGCMPELLTRMRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF AGLPNPLPVARYHSLVGSNIPAGLTINASFEGMVMAVRHDADRVCGMQFHPESILTSNGA RLLEQTLDWALQKLEQTNTLQPILEKLYQAQTLGQQESHQLFSAVVRGELKPEQLAAALV SMKVRGESPQEIAGAATALLENAAPFPRPDYPFADIVGTGGDGSNSINISTASAFVAAAC GLKVAKHGNRSVSSRSGSSDLLAAFGINLEMNAERSREALDDLGVCFLFAPKYHTGFRHA MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYKRAAVVHSGG MDEVSLHAPTLVAELNNGEVLNYQLEAADFGLTPYHQDALAGGTPEENRDILTRLLQGKG EAAHEAAVAANVAMLMRLHGEEDLKANAQKVLDVLRSGAAYDRVTALAARG >gi|333596725|gb|GL892087.1| GENE 345 383589 - 384947 1520 452 aa, chain + ## HITS:1 COG:STM1725_1 KEGG:ns NR:ns ## COG: STM1725_1 COG0134 # Protein_GI_number: 16765069 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 253 1 253 253 462 91.0 1e-130 MQTVLAKIVADKAIWVEARKQQQPLASFQNDVLPSSRRFYDALQGARTAFILECKKASPS KGVIRDDFDPARIAGIYKHHASAISVLTDEKYFQGSFDFLPVVSGIAPQPILCKDFIIDP YQIWLARFYQADACLLMLSVLDDEQYRQLSAVAHSLNMGVLTEVSNEEELERAIALEAKV VGINNRDLRDLSIDLNRTRQLAPRLGAGVTVISESGINSYAQVRELSHFANGFLIGSAMM EHDDLNAAVRRVLLGENKVCGLTREQDAQAAYEAGAIYGGLIFVESSPRAVNEEQARKVM AAAPLSYVGVFRNADINDVAAKADALSLSAVQLHGDEDQAYIDALRHVLAPQIQIWKAQS VGATLPARNLNYVAKYVLDNGQGGTGQRFDWSLLRGEVLDNVLLAGGLSPDNCVEAAKTG CAGLDFNSGVESQPGIKDASKLASVFKTLRAY >gi|333596725|gb|GL892087.1| GENE 346 384958 - 386151 1643 397 aa, chain + ## HITS:1 COG:ECs1833 KEGG:ns NR:ns ## COG: ECs1833 COG0133 # Protein_GI_number: 15831087 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 760 95.0 0 MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVNAQKDPAFQAEFTDLLKNYAGRPTALT KCRNLTEGTKTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASA LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS YETAHYMLGTAAGPHPFPTIVREFQRMIGEETKAQILEKEGRLPDAVIACVGGGSNAIGM FADFIDETRVGLIGVEPAGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEEGQIEESYSI SAGLDFPSVGPQHAFLNSTGRADYVSITDDEALEAFKTLCRSEGIIPALESSHALAHALK MMKANPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI >gi|333596725|gb|GL892087.1| GENE 347 386151 - 386960 396 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 249 1 248 263 157 36 2e-36 MERYDNAFAQLKARQEGAFVPFVTLGDPGPEQSLKIIDTLIDAGADALELGIPFSDPLAD GPTIQNATLRAFAAGVTPSQCFEMLAAIRQKHPTIPIGLLMYANLVFSRGIDEFYAECAR VGVDSVLVADVPVEESAPFRQAAMRHNVAPIFICPPNADDVLMRQIASYGRGYTYLLSRA GVTGAENKAALPLHHLVEKLAEYHAAPPLQGFGISSPEQVTAAIDAKAAGAISGSAIVKI IEKNVDKPEQMLAELHAFVTSMKAATRKA >gi|333596725|gb|GL892087.1| GENE 348 387136 - 388347 1417 403 aa, chain + ## HITS:1 COG:STM1965 KEGG:ns NR:ns ## COG: STM1965 COG2391 # Protein_GI_number: 16765303 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Salmonella typhimurium LT2 # 1 392 21 412 421 655 88.0 0 MSWHSFKQTYLVKFWSPVPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLAGVHA EEWGYFKLIHLEGTPLTRIDGMMIIGMFGGCFAAALWANNVKLRLPKSRIRILQAVAGGI IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAVATAIGSYFGAKFTLLPLFRIPVKMTKV SAASPLTQKPDQARRRFRLGMLVFFAMVAWAICTAMNQPKLGLAMLFGVGFGLLIERAQI CFTSAFRDMWITGRTMMAKAIIAGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGF GIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTVLAYYWDDVSPVLATNWDKVNLLNT FGPLGGLMVTYALLLIAFLLVVAQEKRFFRRATIKTETQENAA >gi|333596725|gb|GL892087.1| GENE 349 388344 - 388577 304 77 aa, chain + ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 139 94.0 1e-33 MKEIVPDYRLDMVGEPCPYPAVATLEALPQLKKGEILEVVSDCPQSINNIPLDAKNHGYT VLGIQQDGPTIRYLIQK >gi|333596725|gb|GL892087.1| GENE 350 389000 - 389338 77 112 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2838 NR:ns ## KEGG: Kvar_2838 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 9 110 10 112 120 79 40.0 4e-14 MLFRCFGFLLFFISFHVSSLNFSSTFLRLNCPERGLVEVILHVYDHTQEKWPGHFETGAG HKRVGDTEIIPFANGDVLFHSISRDAFSYLYDGESTLRHCMKLDERPVYPFF >gi|333596725|gb|GL892087.1| GENE 351 389378 - 390010 734 210 aa, chain - ## HITS:1 COG:ompW KEGG:ns NR:ns ## COG: ompW COG3047 # Protein_GI_number: 16129217 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli K12 # 1 210 1 212 212 335 80.0 4e-92 MKKLAVAALILSSLSGGAYAHEAGEFFIRAGSATVRPTEGSDNVLGMGGFNVSNNTQLGL TFTYMATDNIGVELLAATPFRHRVGLGPTGDIATVHHLPPTLMAQWYFGDSSSKVRPYIG AGVNYTTFFDEKFNDTGKEAGLSDLSLKDSWGVAGQVGLDYLINRDWLINASVWYMDIDT DVRFKAGGEQQSISTRLDPWVFMFSAGYRF >gi|333596725|gb|GL892087.1| GENE 352 390723 - 391466 704 247 aa, chain + ## HITS:1 COG:no KEGG:ECL_01650 NR:ns ## KEGG: ECL_01650 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 247 1 247 247 361 96.0 1e-98 MSITAKSVYRDTGNFFRNQFITFLLIALLCAFITVVLGHAFSPSDEQIATLSQGDHLAGS AGLFDLVQNMTPEQQQILLRASAASTFSGLIGNTILAGGVLLMIQLVSAGQRVSALRAIG ASAPVLPKLFILIFLTTLLVQMGIMLVVVPGVLLAIVLSFAPVMVVQDKMGIFTAMRSSI RLAWANMRLVAPAVISWLLAKTLLLLFAPNFAVLTPNVGAVVANTLSNLISAVLLVYLFR LYMLIRQ >gi|333596725|gb|GL892087.1| GENE 353 391480 - 392019 699 179 aa, chain + ## HITS:1 COG:STM1735 KEGG:ns NR:ns ## COG: STM1735 COG2917 # Protein_GI_number: 16765079 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Salmonella typhimurium LT2 # 1 178 1 178 179 277 91.0 6e-75 MKQFLDFLPLIVFFAFYKLYDIYAGTLALIVATAVVLIYSWVRYRKVEKMALITFLMVAV FGGLTLFFHNDEFIKWKVTVIYGLFAGALLISQWVMKKPLIQRMLGKELTLPQAVWGRLN IAWALFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGVYIYRHMPQDDKH >gi|333596725|gb|GL892087.1| GENE 354 392200 - 394386 2077 728 aa, chain + ## HITS:1 COG:STM2777 KEGG:ns NR:ns ## COG: STM2777 COG4771 # Protein_GI_number: 16766089 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 26 728 25 726 726 973 69.0 0 MNNIIRFAPATLTLAILSTLYQSAHAAEDPLADGETMVVQATAEEALKQQPGVSIITAKD IEKDPPVNDLSEIIRKMPGVNLTGNSATGSRGNNRQVDIRGMGPENTLILIDGVPVTSRN SVRYSWRGERDTRGDTNWVPPEMVERIEVLRGPAAARYGSGAAGGVVNIITKRPTNDWHG SLSLYTNQPENDKEGATKRANFDLSGPLAGDALTMRLYGNINKTDADAQDINTAQNGSYA AGREGVRNKDINALLSWKLTPQQIIDFDYSYSRQGNIYAGDTQYSNSNVSPDGLVSSLYG HETNRMYRQSYGITHNGIWDWGQSKFGVYYEKTNNTRLEEGSTGKVEGMINSDKYDTSRL ESYRSTGELNIPFFWLVEQTLTVGAEWNRDELNDPASMQATNVSGEVINGVPGTASERNS KNSADLTGIYLEDNIEARQGTNLIPGIRFDYHNQFGSNWSPSLNLSQDLGDMFKVKAGIA RVFKAPNLYQSSEGYLLSTRGNGCPNNVSEGSCYLLGNPDLDPEISVNKEIGLAFALEGY EAGITWFRNDYKNKIVSGTDVLGQTSSGANILQWQNGGKAVVEGLEGNLTVPVIRDTLTW RTNATYMIQSESKDTGNPLSIIPKYTVNTMLDWQVNSKLSANLSWTMYGRQKPRENAEIH KEQNAMSDKEIGSYSIVGIGSNYQLTKDLRLNAGISNLFDKQIYRENDGASTYNEPGRAY YAGVTLSF >gi|333596725|gb|GL892087.1| GENE 355 394485 - 394880 324 131 aa, chain + ## HITS:1 COG:STM1736 KEGG:ns NR:ns ## COG: STM1736 COG1607 # Protein_GI_number: 16765080 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Salmonella typhimurium LT2 # 2 129 3 130 133 239 91.0 7e-64 MTTNDAPQGELVLRTLAMPADTNANGDIFGGWLMSQMDMGGAILAKEIAHGRVVTVRVDG MTFLRPVAVGDVVCCYARCVKRGNTSVSINIEVWVKKVSSEPIGQRYKATEALFIYVAVD SDGKPRQLPRD >gi|333596725|gb|GL892087.1| GENE 356 394922 - 395650 409 242 aa, chain - ## HITS:1 COG:STM1737 KEGG:ns NR:ns ## COG: STM1737 COG0810 # Protein_GI_number: 16765081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Salmonella typhimurium LT2 # 1 242 1 242 242 231 76.0 8e-61 MTLDLPRRFPWPTLLSVVIHGAVVAGLLYTSVHQVIEMPAPAQPISVTMVSPADLEPPQV APPPPQPVVEPEPEPEPIPEPPKEAPVVIHKPEPKPKPKPKPKPKPVKKVEERPKREVRP VEPRATQPVENTAPSRPLMNNTTTATKPTVTAPAGPRALSRNQPQYPARAQALRIEGRVR VKFDVTADGRVDNVEILSAQPANMFEREVKSAMRRWRYEAGKPGNGLIVNIVFRLNGGAQ ME >gi|333596725|gb|GL892087.1| GENE 357 395872 - 396168 263 98 aa, chain + ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 98 33 130 130 172 89.0 2e-43 MLYVIYAEDVPDSLEKRLSVRPAHLARLQLLQDEGRLLTAGPMPAVDSNDPGAAGFTGST VIAEFESLEAAQAWAEADPYVAAGVYEKVTVRPYKKVF >gi|333596725|gb|GL892087.1| GENE 358 396203 - 396838 648 211 aa, chain - ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 211 1 211 212 272 73.0 3e-73 MFAEFGVLNFWTYVVGAFFIVLVPGPNTLFVLKTGIGHGVKKGYLAATGVFIGDAVLMFL AWAGVAALIQTTPVLFNIVRYLGAFYLLWLGGKMLWSVMTRQKNAHESSAEPASAILKRS LVLSLTNPKAILFYVSFFVQFIDVNAKNTGTSFLILATTLELISFMYMSFLIFSGAFVTR YLKTKKKLAKLGNGLIGLLFVGFAARLASLH >gi|333596725|gb|GL892087.1| GENE 359 396906 - 397316 352 136 aa, chain - ## HITS:1 COG:no KEGG:KP1_1473 NR:ns ## KEGG: KP1_1473 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 136 52 187 187 139 46.0 4e-32 MNVKLIAALFGIAILSGCASSKTSPERHAFYFVSHQSSFTGGNYTSSVQKNYQLNVAQFR ELYARGKADRAEGRTQAEASEYAQSIRDQLKENAKSQELFAGNAKDKWSSDMDSKDAILF GNELAATYLDGYNGVQ >gi|333596725|gb|GL892087.1| GENE 360 397891 - 399351 1673 486 aa, chain + ## HITS:1 COG:STM1739 KEGG:ns NR:ns ## COG: STM1739 COG1502 # Protein_GI_number: 16765083 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 1 486 1 486 486 945 95.0 0 MTTFYTVVSWLVILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE LHLGKRRAERARAMWPSTAKWLADLKACKHIFAEENSSVAASLFKLCERRQGIAGVKGNQ LQLMTSSDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD SAGSVAFFRSPWAGMMRNAGIEVVEALKVNLFRVFLRRMELRQHRKMVLIDNYIAYTGSM NMVDPRFFKQDSGVGQWIDLMARMEGPIATSMGIVYSCDWEIETGKRILPPPPDGNIMPF EEASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR GVDVSIIMPRKNDSLLVGWASRAFFSELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV NLDMRSLWLNFEITLVIDDAGFGGDLAAVQDDYISRSRLLDARLWAKRPLWQRIAERLFY FFSPLL >gi|333596725|gb|GL892087.1| GENE 361 399385 - 399714 456 109 aa, chain + ## HITS:1 COG:ECs1748 KEGG:ns NR:ns ## COG: ECs1748 COG3099 # Protein_GI_number: 15831002 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 27 135 135 189 89.0 9e-49 MEMDLNNRLTEDETLEQAYDIFLELAVDNLDPADVILFNLQFEERGGAELFDPSEDWAEH VDFDLNPDFFAEVVIGLADEDGGEINDIFARVLLCREKDHKLCHILWRE >gi|333596725|gb|GL892087.1| GENE 362 399746 - 400582 577 278 aa, chain - ## HITS:1 COG:STM1741 KEGG:ns NR:ns ## COG: STM1741 COG1226 # Protein_GI_number: 16765085 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Salmonella typhimurium LT2 # 1 278 1 278 278 451 82.0 1e-127 MSRLFTSARQRLYHLLFDPETVSGRRFEGLCGLFALISVIIIFIESGAGTQYHMTYEEWH VFVWLELVVTLVFTAEYVLRVISWPNPAKYVFSFWGFIDLATILPLYVMWLWPEISLNYV FAWRAMRAIRVLRILKLLRFMPSLRVFWVAIVSARHQLILFYSFIAIVMIVFGTLMYLIE GPKYGFATLNASVYWAIVTVTTVGYGDITPHTPLGRIVASVLILIGYSVIAIPTGLITTH MSSAFQNSKQQRKCPKCQQGNHEPGARFCHRCGNALSD >gi|333596725|gb|GL892087.1| GENE 363 400628 - 401632 855 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 333 51 1e-89 MNAIDEKRNVLLEIADLKVHFDIKDGKQWFWQPAKTLKAVDGVTLRLYEGETLGVVGESG CGKSTFARAIIGLVKATDGKVAWLGKDLLGMKPDEWRDVRSDIQMIFQDPLASLNPRMTI GEIIAEPLRTYHPKMPRQEVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQKLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPLHPYTKALMSAVPVPDPDLEKNKTIQLLEGELPSPINPPSGCVF RTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL >gi|333596725|gb|GL892087.1| GENE 364 401629 - 402642 587 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 29 317 28 311 329 230 42 2e-58 MTIIETATAPQAQQRTSALLDVKDLRVTFKTPDGDVTAVNDLNFDLRAGETLGIVGESGS GKSQTAFALMGLLASNGVIGGSATFNGKEILNLPEHELNKLRAEQISMIFQDPMTSLNPY MRVGEQLMEVLMLHKGLGKAEAFEESVKMLDAVKMPEARKRMRMYPHEFSGGMRQRVMIA MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL VMYAGRTMEYGNARDVFYQPAHPYSIGLLNAVPRLDAEGESLLTIPGNPPNLLRLPQGCP FQPRCPHAMEICNSAPPLEAFAPGRLRACFKPLEELV >gi|333596725|gb|GL892087.1| GENE 365 402654 - 403562 1193 302 aa, chain - ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 518 97.0 1e-147 MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVASLVVLVLIALFVTLAPMLS QFTYFDTDWGMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVIVGT LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA RIVRGQTLSLKRKEFIEAAQVGGVSTANIVVRHIVPNVLGVVVVYASLLVPSMILFESFL SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLYPAGFLVVTLFCFNFIGDGLRDALDPK DR >gi|333596725|gb|GL892087.1| GENE 366 403575 - 404495 869 306 aa, chain - ## HITS:1 COG:ECs1744 KEGG:ns NR:ns ## COG: ECs1744 COG0601 # Protein_GI_number: 15830998 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 535 96.0 1e-152 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIT TQYFNYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFILAVVLGVTAGVIAA LKQNTKWDYAVMGVAMTGVVIPSFVVAPLLVMIFAITLKWLPGGGWNGGALKFMILPMVA LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIIFRHALKPALLPVLSYMGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAVVDVLYAVI DPKIRY >gi|333596725|gb|GL892087.1| GENE 367 404578 - 406209 1880 543 aa, chain - ## HITS:1 COG:STM1746 KEGG:ns NR:ns ## COG: STM1746 COG4166 # Protein_GI_number: 16765090 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 543 40 582 582 993 92.0 0 MSIITKKSLVAAGILTALIAGNAAMAADVPAGVQLAEKQTLVRNNGAEVQSLDPHKIEGV PESNVNRDLFEGLLVTDVDGHPAPGVAEKWDNKDFKVWTFHLRKDAKWSDGTPVTAEDFV YSWQRLADPNTASPYASYLQYGHIANIDEIITGKKPVTDLGVKAIDANTFEVTLSEPVPY FYKLLVHPSVSPVPKSAVEKFGEKWTQPANIVTNGAYKLKDWVVNERMVLERNPQYWDNA KTVINQVTYLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPKEVHVDPYLCTYY YEINNQKAPFTDVRVRTALKLALDRDIIVNKVKNQGDLPAYSYTPPYTDGMKLVEPEWFK WSQEKRNEEAKKLLAEAGYTADKPLTFSLLYNTSDLHKKLAIAVASIWKKNLGVNVKLEN QEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIGDTL KVADDAQRADLYAKSEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNISVKNLYI IKH >gi|333596725|gb|GL892087.1| GENE 368 406979 - 407527 571 182 aa, chain - ## HITS:1 COG:STM1748 KEGG:ns NR:ns ## COG: STM1748 COG2095 # Protein_GI_number: 16765092 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 1 182 34 215 215 305 94.0 3e-83 MTSYQTAAARNKTNLTANLSVAIILLTSLFLGDAILQVFGISIDSFRIAGGILVVTIAMS MISGKLGEDKQNKQEKSETAIRESIGVVPLALPLMAGPGAISSTIVWGTRYHSLMHLIGF SVAIALFALCCWGVFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKSIFPGL LH >gi|333596725|gb|GL892087.1| GENE 369 408107 - 410788 2666 893 aa, chain + ## HITS:1 COG:STM1749_2 KEGG:ns NR:ns ## COG: STM1749_2 COG1454 # Protein_GI_number: 16765093 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 448 876 1 429 445 844 97.0 0 MAVTNIAELNALVERVKKAQREYANFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNA LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTF DNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDVILKNGALNAAIVGQP AYKIAELAGFSVPATTKILIGEVKVVDESEPFAHEKLSPTLAMYRAKDFDDAVEKAEKLV AMGGIGHTSCLYTDQDNQPERVAYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHK RALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSVVRKGAELANSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSG TGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMEMPKSLCAFGGLDAVTHALE AYVSVLASEFSDGQALQALKLLKENLPASYNEGSKNPVARERVHSAATIAGIAFANAFLG VCHSMAHKLGSQFHIPHGLANALLISNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIEKLLAWLESLKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQ CTGANPRYPLISELKQILLDTYYGRNFTESDAAAVKVDIPAVVKADKKAKKNA >gi|333596725|gb|GL892087.1| GENE 370 410858 - 411472 462 204 aa, chain - ## HITS:1 COG:ECs1740 KEGG:ns NR:ns ## COG: ECs1740 COG1435 # Protein_GI_number: 15830994 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Escherichia coli O157:H7 # 1 203 1 203 205 357 85.0 7e-99 MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRSVVYTAEIDDRFGAGKVSSRIGLSSPAR LFNPQTNLLEDIRAEHAAKPVHCVLVDESQFLTREQVHALSEVVDELDIPVLCYGLRTDF RGELFAGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQSGKPYADGEQVVIGGNERYVS VCRKHYKEALAVGSLTALQGDNRK >gi|333596725|gb|GL892087.1| GENE 371 411509 - 411769 107 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDHCTIFCTVISGGLHTPGGETPVNSSRIVQNNALKQAVKAFSTDNKLNPWPEITLLFIV ASSFIKIHYLLTILVFATLPRGNTKG >gi|333596725|gb|GL892087.1| GENE 372 412023 - 412436 516 137 aa, chain + ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 136 1 136 137 187 94.0 7e-48 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEIEERTRKLQQ YREMLIADGIDPNELLNSMAAAKTGTKAKRAARPAKYSYIDENGEEKTWTGQGRTPAVIK KAMDEQGKQLDDFLIKD >gi|333596725|gb|GL892087.1| GENE 373 412640 - 413545 900 301 aa, chain - ## HITS:1 COG:STM1752 KEGG:ns NR:ns ## COG: STM1752 COG1210 # Protein_GI_number: 16765096 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 1 301 1 301 302 563 95.0 1e-160 MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLV THSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVL CAHPVVGDEPVAVILPDVILDEYESDLSQENLAEMIKRFDETGSSQIMVEPVDDVTAYGV VDCKGVNLQPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSAEIWALLAKTPPGAGDEIQ LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNSLGEEFKAWLKGSMGI K >gi|333596725|gb|GL892087.1| GENE 374 413745 - 414758 521 337 aa, chain - ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 134 1 134 134 228 85.0 1e-59 MTQPLAGKHILIVEDEPVFRSLLDSWLSSLGATTSLAEDGVEALEKMASMAPDLMICDLE MPRMDGLMLVENLRNEGYQTPILVISATENMADIAKALRLGVQDILLKPVKDLNRLRETV LACLYPNMFNSRVEEEERLFQDWDALVSNPLAAAKLLQELQPPVQQNISHCRVNYRQLVA ADQPGLVLDIAPLSDSDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLSHQGQRLPE LGSLLKQVNQLFRQANLPGQFPLLVGYYHSGLNNLILVSAGLNATLNTGEHHIQVSNGVP LGTLGNTYLNQISHRCTSWQCQIWGAGGRLRLMLSTE >gi|333596725|gb|GL892087.1| GENE 375 414848 - 415663 394 271 aa, chain - ## HITS:1 COG:ECs1736 KEGG:ns NR:ns ## COG: ECs1736 COG1752 # Protein_GI_number: 15830990 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 269 43 312 314 447 78.0 1e-126 MGIDVDIVAGCSIGSLVGSAYACGKLPELESWVRSFSYWDVLRLMDLSWQRGGLLRGERV FNQFRKIMPLADFSHCQMPFGAVATNLSTGRELWLTEGDIHLAVRASCSMPGLMAPVPHN GYWLVDGGVVNPVPISLTRAMGADIVIAVDLQHDAHLMQQDLMPVNLQSDDAEKEKLAWH ARLRGRIGRLTARRAVTAPNAIEIMTTSIQILENRLKRNRMAGDPPDILIQPYCPQISTL DFHRAEAAIAAGSLAVEKKIDELLPFVRTAR >gi|333596725|gb|GL892087.1| GENE 376 415864 - 416328 216 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 127 3 131 134 87 36 2e-15 MSQLCPCGSALEYSLCCQRYLSGEQVAPDPSHLMRSRYTAFVIKNADYLIKTWHPSCHAA DFRQEIEAGFANTVWLGLTVFEAAPGRDANEGYVSFVARFSEQNKPGAIIERSRFLKESG QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGSNA >gi|333596725|gb|GL892087.1| GENE 377 416370 - 417212 1117 280 aa, chain + ## HITS:1 COG:STM1756 KEGG:ns NR:ns ## COG: STM1756 COG0788 # Protein_GI_number: 16765100 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Salmonella typhimurium LT2 # 1 280 1 280 280 543 96.0 1e-154 MQSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFND TTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGN HETLRTLVERFDIPFELVSHEGHTREEHDNLMAAAIEAHNPDYVVLAKYMRVLTPSFVAR FPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHT YTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL >gi|333596725|gb|GL892087.1| GENE 378 417961 - 418638 1009 225 aa, chain - ## HITS:1 COG:STM1761 KEGG:ns NR:ns ## COG: STM1761 COG2181 # Protein_GI_number: 16765102 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Salmonella typhimurium LT2 # 1 224 1 224 225 407 94.0 1e-113 MHFLNMFFFDIYPYIAGTVFLVGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL GIFAGHFLGMLTPHWMYEAWLPIEVKQKMAMIAGGACGVMTLVGGLLLLKRRLFSPRVRA TTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASEHLDGV AFIFRVHLVLGMTLFVLFPFSRLVHIWSAPVEYLTRKYQIVRARR >gi|333596725|gb|GL892087.1| GENE 379 418638 - 419348 889 236 aa, chain - ## HITS:1 COG:STM1762 KEGG:ns NR:ns ## COG: STM1762 COG2180 # Protein_GI_number: 16765103 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Salmonella typhimurium LT2 # 1 236 1 236 236 381 90.0 1e-106 MIELVIVSRLLEYPDAALVQHQQELFDALASSENLDKEDAQKLGIFLRDLLARDLLDAQA DYSQLFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYEQHGLQLDSRELPDHLPLYLEY LAQLPKEEALGGLQDIAPILALLGARLQQRESSYVVLFDLLVKLANASVDSQKVAEKIAD EARDDTPQALDAVWEEEQVKFFADQNCGESEISAHQRRFAGAVAPQYLNISNGGQH >gi|333596725|gb|GL892087.1| GENE 380 419345 - 420880 1897 511 aa, chain - ## HITS:1 COG:STM1763 KEGG:ns NR:ns ## COG: STM1763 COG1140 # Protein_GI_number: 16765104 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Salmonella typhimurium LT2 # 1 510 1 510 511 1064 96.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGTGFPTDWENQE KWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQ PIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDKNFENMQKAMYGQFENTFMMYLP RLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKS EKCIFCYPRIEAGMPTVCSESCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFL DPNDPKVIEQALKDGIPQSVIDAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHFKRAETV DGVNDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKSGCGFTFG DGCHGSDSKFNLFNSRRIDAMDVTSKTEPHQ >gi|333596725|gb|GL892087.1| GENE 381 420877 - 424620 4682 1247 aa, chain - ## HITS:1 COG:STM1764 KEGG:ns NR:ns ## COG: STM1764 COG5013 # Protein_GI_number: 16765105 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Salmonella typhimurium LT2 # 1 1247 1 1247 1247 2501 95.0 0 MSKFLDRFRYFKQKGETFADGHGQVLDTNRDWEDGYRQRWQHDKVVRSTHGVNCTGSCSW KIFVKNGLVTWEMQQTDYPRTRPDMPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMK MWREAKVQHSDPVDAWASIIEDADKAKSFKQARGRGGFVRSSWKEVNELIAASNVYTVKT YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ GTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD LVDALGQENNPEWKTVACNSNGELVAPNGSIGFRWGEKGKWNLEQRNGTTGEETELRLSM LGSQDEIADVGFPYFGGEGSEHFNKVELQNVLMHKLPVKRLQLADGSTALVTTVYDLTMA NYGLERGLNDENCATSYDDVKAYTPAWAEQITGVPRAQITRIAREFGENADKTHGRSMII VGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ RPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAP QLGTNPLRIAEAAKQAGMSPVDYTVKSLKDGSIRFAAEQPENGKNHPRNLFIWRSNLLGS SGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWKDNGLDGKLDLVVTLDFRLSSTC LYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKDIAKKFSEVCVG HLGKETDVVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGVTAPHIIPVERDYPATYERF TSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKADGPAKGQPMLNTAIDAAEMILTLA PETNGHVAVKAWAALSEFTGRDHTHLAKNKEEEKIRFRDIQAQPRKIISSPTWSGLEDEH VSYNAGYTNVHELIPWRTLSGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGAKSN GNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFN SNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITEQRGGIHNSVTRITPKPTHMIG GYAQLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK >gi|333596725|gb|GL892087.1| GENE 382 425003 - 426400 1545 465 aa, chain - ## HITS:1 COG:narK KEGG:ns NR:ns ## COG: narK COG2223 # Protein_GI_number: 16129186 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 463 1 463 463 716 86.0 0 MSHSSAPERETGAVITDWRPEDPAFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAV NLPKVGFTFTTDQLFMLTALPSLSGALLRVPYAFMVPVFGGRRWTAFSTGIMIVPCVWLG FAVQDTSTPFSVFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGINGGLGNMGVSV MQLIAPLAISVSIFAAFGGGGVTQPDGSVLFLQNASWIWVPFLVVFTLAAWFFMNDLSAS KASLREQLPVLKRGHLWVMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILQFAFFGPFI GALARSLGGMISDRLGGTRVTLVNFVVMAIFCALLFLTLPAGGEGGNFFAFFGVFMVLFL TAGLGSASTFQMISVIFRKLTMDRVKAQGGSDEQAMREAATDTAAALGFISAIGAIGGFF IPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWLVYGRNTKKNK >gi|333596725|gb|GL892087.1| GENE 383 426710 - 428506 1365 598 aa, chain + ## HITS:1 COG:STM1766 KEGG:ns NR:ns ## COG: STM1766 COG3850 # Protein_GI_number: 16765107 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Salmonella typhimurium LT2 # 1 598 1 598 598 939 80.0 0 MLKRCLSPLTLVNQLALIVLLSTAIGVTGMAISGWLVQGVQGNAHAINEAGSLRMQSYRL LASVPLTQADQSLIDEMERTAFSPELERAAIRDGQQLQLKALQGYWHTQLEPGLKRAKDR ETVAQDVAGFVSRIDHLVSSFDRTTELRIDRVVMVHRAMALFMGLLLIFTVIWLRARLLN PWKQLLAMARAVTQRDFTQRTHISGRNEMAMLGEALNTMSAELSESYAVLEKRVQEKTAG LEQKNEILSFLWQANRRLHMQVPLCERLSPVLNGLQNLTLLHDLELRVYDIEDEENHQEF TCQSDISCDDKGCHLCPRGLPPLTTSGTTLKWRLMDAHTQYGILLATLPAGRHLSHDQQQ LVDTLVEQLTATLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQD EGMPESNKALLSQIRNELNTSWIQLRELLTTFRLQLTEPGLRPALESSCQEFSARLGFPV KLDYQLPPRFVPSHQAIHLLQIAREALSNVLKHAEATAVTVTVSCQDNQVKLRVQDNGRG VPENAERTNHYGLIIMRDRAQSLRGDCQVRRGESGGTEVVVTFIPEKPLITAQGENHD >gi|333596725|gb|GL892087.1| GENE 384 428499 - 429149 836 216 aa, chain + ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 335 96.0 3e-92 MTNQEPASILLIDDHPMLRTGVKQLVSMAPDITVVGEASNGEQGIELAESLDPDLILLDL NMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL QQAAAGEMVLSEALTPVLAASLRANRATSDRDVSQLTPRERDILKLIAQGLPNKMIARRL DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF >gi|333596725|gb|GL892087.1| GENE 385 429151 - 430569 1256 472 aa, chain - ## HITS:1 COG:no KEGG:ECL_01618 NR:ns ## KEGG: ECL_01618 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 33 472 1 440 440 781 89.0 0 MTTLKAVSSRIRFLLLLPLLTAGAVHGAPKSFVQQAQNPFDNNGDSLPDLGMAQPTSEGE KHLAEMAKAFGEASMTDNGLTAGQQARQFAFGQVRDAVSGEVNEQIESWLSPWGNANVNV LVDDDGNFNGSSGSWFIPWNDNSRYLSWSQLGLTQQTDGLVSNIGAGQRWVAGDWLLGYN TFYDNLLEDNLQRAGLGAEAWGENLRLSANYYQPFAGWQPRSDIREQRMARGYDVTAKAW LPWFHHLNTSVSFEQYFGDNVDLFNSGTGYHNPVAVNLGLNYTPVPLVTLTAAHKQGESG VSQNNLGLKLNYRFGVPLAKQLSAGEVAATRSLRGSRYDSPERDNLPVMEFRQRKTLSVY LATPPWDLKPGETVMLKLQIRSTHGIRQIHWLGDTQALSLTSPTNSNSSDGWSVIMPAWN DAEGAKNEWRLAAVVEDKDGQRVSSNEITLSVVQPLVAMPDDDPRWKLLPDE >gi|333596725|gb|GL892087.1| GENE 386 430727 - 433204 1947 825 aa, chain - ## HITS:1 COG:AGl1895 KEGG:ns NR:ns ## COG: AGl1895 COG0243 # Protein_GI_number: 15891062 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 823 25 893 903 781 49.0 0 MTETRTTCPYCGVGCGVVASTNGEKVSIRGDETHPANFGRLCVKGSALGETTGLQGRLLR PVVDGLEVEWPQALGEAGERLRNIINEWGPQAVAFYASGQLLTEDYYAANKLMKGFIGAA NIDTNSRLCMSSAVVGYKRAFGEDVVPCSYEDVENSDLVVLVGSNAAWTHPVLYQRLVQA KHNNPQMKVVVIDPRKTATCDIADLHLALRPGSDAGLFVGLLNLIQGTDEWPIARVAAFC DLHSDETGTFYDWFVTAPRAITLYTMGVNQSSSGSDKCNAIINVHLASGKFNRPGCGPFS LTGQPNAMGGREVGGLANQLAAHMNFEPDDLSRVARFWGTERLAQTPGLMAVELFDAIAR GEVKAVWIMGTNPAVSLPDSHAVCQALATCPLVIVSEVMQETDTSRFAHIRFPALGWGEK NGTVTNSERRISRQRAFLPAPGEAKPDWWIIARIAEQLGYGDAFAWAHPQEIFCEHAALT AFENNGERALNLRELASLTREAWDGLAPYQWCAGDFPQRTIVPVSPSSHGAGVDELYPLI LNTGRIRDQWHTMTRTGYVPRLMQHIDEPVVEMNATDAARAGLTDGQLARISSPRGVMVA RVHISPCQRAGELFAPMHWNAQFARQGKVNALVEGRVDACSGQPESKQTAVRIMPWLPAW QGELYARELPALPSSVCWWRKASRLTVAGDRPLLSWVMEYASGRGWQLQVAQTGERSSVL AWHHGALMLGYWEGHTLPALAHAFIEDAFAAAPVQIAERHALLHGQRPGESADPGRIICS CFSVGENTIRKAIAEGCDSAAALGAKLRCGTNCGSCVPELKGLFG >gi|333596725|gb|GL892087.1| GENE 387 433201 - 437187 4292 1328 aa, chain - ## HITS:1 COG:RSp1222 KEGG:ns NR:ns ## COG: RSp1222 COG1251 # Protein_GI_number: 17549443 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Ralstonia solanacearum # 402 1213 5 819 852 1051 63.0 0 MRLVIIGNGMAATRLIASLSGRTSGRFAITVIGDEPEHAYNRIQLSPVLGGEKQAEHIYL HDEDWYTARGVTVLRGEKAIAVNVNAREVQTSVRKLGWDVLVFATGSTPFVPPVPGGDAP HVFTFRTLAETRAIQNISGPAVVLGGGVLGVETAAALACKGDNVTLVHRGPWLMEQQLDQ QAGLLLEEALAARGVRCELTSGITAITDDAVTLLNGRRITATRVVLATGVQPNVALAQAS GIHCARGIVVDSQMQTSVPNIYAIGECCEIDGQTFGLVAPCLAQADILAARLAGEFTAPF TLTDNGVRLKVTGVELFSLGRATAQADDVVWSSWDPLTRHYRRLLIHQGALAGVLLMGDC RSAATFTDLLATAAPAHADWLFDRFTTQPRVAGQNAMTKPTLVVVGHGMVGHHFLEDCVN RNLHQQYQIIVFGEERYAAYDRVHLSEYFGGRSADSLSLVEGDFFADNGIELRLSQQIVA LDRDAHVVRTASGHETHWDKLVLATGSYPFVPPVPGNDLPGCFVYRTLDDLDNIAAHAAG SRRGVVIGGGLLGLEAANALKQLGLETHVVEFAPNLMAVQLDNDGAAMLRRKIEALGVGV HTSKSTTEIANADGGLVLRFADGEQLETDMVVFSAGIRPQDALARSSGLATGERGGICID DGCRTSDPDVLAIGECALWEGKIFGLVAPGYQMARVAAAALAGEDKTFTGADMSTKLKLL GVDVASFGDAHGRTPGALSYQWTHGPQQIYKKIVVSHDGKTLLGGVLVGDASEYATLVQM MLNGISLPKEPETLILPALSGSAPKALGVAALPESAQICSCHNVSKGDICRAVSAGATDI GAIKQCTKAATGCGGCSALVKQVMECQLAEQGVEVKKDICEHFPYSRQEIYHLVRVNHIR TFDQLISRYGQGHGCEICKPLVGSVLASCWNEYLLKPTHLPLQDTNDRYFANIQKDGTYS IVPRMPAGEVTADGLIAIGQIAKRYSLYSKITGGQRIDLFGATLEQLPEIWQALVEAGFE TGHAYGKSLRTVKSCVGSTWCRYGVQDSTGLAVRLEHRYKGLRAPHKIKMAVSGCTRECA EAQSKDVGVIATDKGWNLYLCGNGGMKPRHADLFASDLDDETLIRTVDRFLMFYIRTADR LQRTSTWMDNLEGGLDYLREVILNDSLGIAHELEQEMARVVETYQCEWQTTLNDPDRLAL FRTAVNAPAGEENKRWQEICAIDEIPEQAGIGAQLGHKPIALFRFGKTVYALDDREPGSR ANVLSRGILGDAAGEPVVISPLYKQRIRLRDGCQAESGAPAVRAWPVKIENGRVWVGNEE LVMRAEAS >gi|333596725|gb|GL892087.1| GENE 388 437200 - 437988 221 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 10 219 11 220 309 89 29 4e-16 MKPLIQVQAVSQRFSTASGEFLALQNVSFDIHEGETVSLIGHSGCGKSTLLNLIAGITLP TEGGLICDNREIAGPGPERAVVFQNHSLLPWLTCFDNVALAVDQVFRHTMSKAERKEWIE HNLDRVQMGHALHKRPGEISGGMKQRVGIARALAMKPKVLLMDEPFGALDALTRAHLQDS VMQIQQALNTTIVLITHDVDEAVLLSDRVLMMTNGPAATVGEILRVDLPRPRNRVQLADD SRYHHMRQQILHFLYEKQPKAA >gi|333596725|gb|GL892087.1| GENE 389 437998 - 438876 1121 292 aa, chain - ## HITS:1 COG:RSc0380 KEGG:ns NR:ns ## COG: RSc0380 COG0600 # Protein_GI_number: 17545099 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Ralstonia solanacearum # 1 289 5 284 287 326 63.0 3e-89 MQHLQKTKPQETSESGEVIVLPPVQVRRRTPAFARRMNDFSQRVIPALLGLGLLVLLWQL AAINSKGFPTPLSTLDSAMTLFADPFYRDGPNDMGIGWNVLASLQRVAIGFGLAALAGIP LGFLIGRFTFFSRMFNPLIALLRPVSPLAWLPIGLLLFQKAEPASSWTIFICSIWPMVIN TAEGVRRIPQDYLNVARVLQLSEWTIMRRILFPAVLPAVLTGVRLSIGIAWLVIVAAEML TGGLGIGFWIWNEWNNLNVENILIAIVIIGVVGLLLEQGLMLIARRFSWQEK >gi|333596725|gb|GL892087.1| GENE 390 438879 - 440126 1298 415 aa, chain - ## HITS:1 COG:RSc0381 KEGG:ns NR:ns ## COG: RSc0381 COG0715 # Protein_GI_number: 17545100 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Ralstonia solanacearum # 6 410 14 418 420 476 57.0 1e-134 MADLSRRRLLQASMLASGAMLLPGVMQAAWAAGSDKPEQDTVRIGFIPLTDCAPVVIAAL KGFDKKHGITIVPTKEASWAAVRDKLVAGELDAAHILYGLLYGLELGIAGKPQPMANLMT LNQNGQAITLSSDLAEKGVRDLDGLKKLIGQQAPGTYTFAHTFPTGTHAMWLYYWLASAG INPFDDVRTVVVPPPQMVMNMRIGNMVGFCVGEPWNARAINDRIGFTAATSQSIWADHPE KILGTRRDWVAKNPHTARALVSAVLEAARWIDASPENKRETAQILSRRAWLNCKEQYLTG RMLGEYDNGVGQRWKDAHPIRFFDEGAVSYPYLSDGMWFLTQFRRWGLLNAAPDYADIAQ RINQTAVWQDAATAVGGMSTPSSPYRSSTLMDGTVWNGTDPEGYANRFAIHRKGA >gi|333596725|gb|GL892087.1| GENE 391 440355 - 441527 1223 390 aa, chain - ## HITS:1 COG:mlr2855 KEGG:ns NR:ns ## COG: mlr2855 COG3707 # Protein_GI_number: 13472528 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mesorhizobium loti # 304 383 130 209 216 66 40.0 8e-11 MTIEAGSSPGATEWFQRARRLREEQLGRLAQLGELVNGISRLVHMLQCERGASNVWLCSQ GKLYAPECKASRALVDENLAALYLLFNQPLPGSTLCERIASALHCLETLTVLRDGVTGRS VTAPQAMEHYSRILRHLLSIVPQLSDSIDDPHIAGRFVALYSLMQGKELVGQERALGAIG FTQGFFDDETRQRLVDRIDGQQACFEVFISHCTPDVQETFTFNCLPDLETEKLRREACTR QPPADNGDTALKWFALQTARLEHLRTLEEVAIADLMTAVEERRGSENLHVADEHDDILTR FPDKPLLPLVRQQAREIEQLSRQLASLRDTLEERKTIDKAKSVLMTHQNMSEEQAWTALR KMAMDKNQRMVDIARALLTVKNLWNIPPRE >gi|333596725|gb|GL892087.1| GENE 392 441601 - 441954 516 117 aa, chain + ## HITS:1 COG:ECs1724 KEGG:ns NR:ns ## COG: ECs1724 COG1553 # Protein_GI_number: 15830978 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 204 89.0 5e-53 MQKIVIVANGAAYGSESLFNSLRLAIALRDKENELELRLFLMSDAVTAGLKGQKPAEGYN IQQMLEILTAQNVPVKLCKTCTDGRGITGLPLIEGVEIGTLVELAEWTLSADKVLTF >gi|333596725|gb|GL892087.1| GENE 393 442061 - 443845 1726 594 aa, chain + ## HITS:1 COG:YPO1229 KEGG:ns NR:ns ## COG: YPO1229 COG0840 # Protein_GI_number: 16121516 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Yersinia pestis # 1 594 1 595 595 518 55.0 1e-146 MFRSIRARIIAATTGCLVVALLLNTVINFQVTRQDNQQSQRDILTSTSASHNMAIADWVN SKMTVITSAQPVALSDDPVPVFKQLALAGGFTNVYVGYASKTAKFSDPTGVPADYDPTLR PWYQQVVSTDGPVVTAPYVDAGTGKLVVTFAVPVKENGTLKAVVAGDVAMDSVVANVRGI HPTPASSGLLLDSNGTVIAGSDPALTLKPFTETIKGIDFAALKSGNLVDGTFNGRDKTFM ATTVPGTHWLLVVALDNDDATAGMRSLLKASALSLAILALLSGALMHVLIARLLKRLSDI RDAMNNIANGTNDLSQRLPDKGGDEVAQIAQAFNAFSDKLSVVMVQLRDASASVKNAAHE IAAGNQDLSGRTEQAASSLRETASAVEEITASVTQSNESAAEANEQAGKASAAASRGGDV VAQAISTMQSIELASAKIGDITSVIDGIAFQTNILALNASVEAARAGEQGRGFAVVAGEV RNLASRSAQAAKEIKTLIDSTTDSVATGSRYVHLAGESMDEIRSSIGSVSGIMREISIAT SEQMKGIHEINHAVTHLDRMVQQNAELVVQSAAAASALQSQAGDLAETAGHFRI >gi|333596725|gb|GL892087.1| GENE 394 444040 - 444279 224 79 aa, chain + ## HITS:1 COG:no KEGG:ECL_01607 NR:ns ## KEGG: ECL_01607 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 79 1 79 79 140 96.0 2e-32 MARVKTSLKLFGGDTVVVRCSERCRIHLMSTKGQKQSQADILTVQDDKAWLTVPYTGTWD VLIDSHSQSLEHSVSYVAA >gi|333596725|gb|GL892087.1| GENE 395 444310 - 444984 685 224 aa, chain - ## HITS:1 COG:chaC KEGG:ns NR:ns ## COG: chaC COG3703 # Protein_GI_number: 16129181 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli K12 # 1 224 15 238 238 389 84.0 1e-108 MKADCKTAFGAIEESLLWSAEQRAASLAATLACRPDDGPVWIFGYGSLMWNPALEYVESA TGTLPGWHRAFCLRLTAGRGSACQPGRMLALKEGGRTTGVAYRLPDTTLEEELTLLWKRE MITGCYMPSWCKLDLDDGRTVNALVFIMDPRHPLYEADTRTQVIAPLIAAASGPLGTNAQ YLFSLDQELTRLGMQDDCLSELVVKVKALLEGNPLSNTLRPGFA >gi|333596725|gb|GL892087.1| GENE 396 445183 - 445413 320 76 aa, chain - ## HITS:1 COG:STM1770 KEGG:ns NR:ns ## COG: STM1770 COG4572 # Protein_GI_number: 16765111 # Func_class: R General function prediction only # Function: Putative cation transport regulator # Organism: Salmonella typhimurium LT2 # 1 76 1 76 76 94 92.0 7e-20 MPYKSKSELPDNVQNVLPAHAQDIYKEAFNSAWDQYKDKDDRRDDASREETAHKVAWAAV KNDYEKGDDDKWHKKK >gi|333596725|gb|GL892087.1| GENE 397 445681 - 446781 1264 366 aa, chain + ## HITS:1 COG:STM1771 KEGG:ns NR:ns ## COG: STM1771 COG0387 # Protein_GI_number: 16765112 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 570 91.0 1e-162 MTATHEAVKTRHKETSLIFPVLALAVLLFWGSSQSLPVVVGINILALVGILTSAFSVVRH ADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVG FSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPGANFTTGQALLVALISAA MYGVFLLIQTKTHQSLFVYEHEDEADDDDPHHGKPSAHSSAWHTVWLIVHLIAVIAVTKM NANPLEALLTELNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATIS LTVPVVTLIAFMTGNDLQFALGAPEMIVMMASLLLCQISFSTGRTNVLNGAAHMALFIAY LMTIFA >gi|333596725|gb|GL892087.1| GENE 398 446897 - 447751 1279 284 aa, chain - ## HITS:1 COG:STM1772 KEGG:ns NR:ns ## COG: STM1772 COG2877 # Protein_GI_number: 16765113 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 536 94.0 1e-152 MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKVITDVHEASQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFIEGGNDQVILCDRGSNFGYDNLVVD MLGFSVMKNVSNQSPVIFDVTHSLQCRDPFGAASGGRRAQVTELARAGMATGLAGLFIEA HPDPANAKCDGPSALPLDKLEPFLKQIKAIDDLVKSFDELDTSN >gi|333596725|gb|GL892087.1| GENE 399 447788 - 448597 1018 269 aa, chain - ## HITS:1 COG:STM1773 KEGG:ns NR:ns ## COG: STM1773 COG2912 # Protein_GI_number: 16765114 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 269 1 269 269 445 84.0 1e-125 MRSLADFEFNKVPLCDGMILISEMIRDDFTSQYVYAELENLVSLAREEINQARPQDWQLE KLIELFYGEWGFCDTRGVYRLSDALWLDQVLKNRQGSAVALGAILLWVAHELDIPLVPVI FPTQMILRAEWLDGEMWLINPFNGDTLDEHTLDVWLKGNISPIAELFNEDLDEADNAEVI RKLLDTLKSALMEERQMELALRASEVLLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLNY FVEQCPEDPISEMIRAQINAIAHKHITLH >gi|333596725|gb|GL892087.1| GENE 400 448601 - 448813 190 70 aa, chain - ## HITS:1 COG:STM1774 KEGG:ns NR:ns ## COG: STM1774 COG3094 # Protein_GI_number: 16765115 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 70 60 129 129 88 74.0 3e-18 MKAGYLPFTDKGAWLTEKRFGVIIYIVLGFIAPGRYRPRSQQAGFIAFLLGLVVLYIIIK LATTRIPLLG >gi|333596725|gb|GL892087.1| GENE 401 448810 - 449640 467 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 7 274 23 289 294 184 41 1e-44 MDFQRWLREAVGELSDSESPKRDAEILLEHVTGKARTYLLAFGETELTAEQEAQLASLLA RRKTGEPVAHLVGEREFWSLPLYVSAATLIPRPDTECLVEQALARLPAQPCEILDLGTGT GAIALALASERPDCTVTAVDVMPDAVALARRNVERLGLNNVAVLQSSWFAALESRMFDMI VSNPPYIDEDDPHLARGDVRFEPLTALVAANQGLADLDHIVTTSRQHLLPGGWLLVEHGW TQGEAVRALFTQAGYSAVETCRDYGGNERLTLGQWS >gi|333596725|gb|GL892087.1| GENE 402 449640 - 450722 1238 360 aa, chain - ## HITS:1 COG:ZprfA KEGG:ns NR:ns ## COG: ZprfA COG0216 # Protein_GI_number: 15801440 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Escherichia coli O157:H7 EDL933 # 1 360 1 360 360 612 95.0 1e-175 MKPSIVAKLEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWRQVQE DIETAQMMLDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTG GDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEIIAKISGDGVYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGKLDMLIEPIVQEYQADQLAALSEQD >gi|333596725|gb|GL892087.1| GENE 403 450764 - 452020 1465 418 aa, chain - ## HITS:1 COG:ECs1715 KEGG:ns NR:ns ## COG: ECs1715 COG0373 # Protein_GI_number: 15830969 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 710 95.0 0 MTLLALGINHKTAPVSLRERVTFSPDTLDLALDSLLAQPMVQGGVVLSTCNRTELYLSVE EQDNLHEALIRWLCDYHNLNEEELRNSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQ VKKAFADSQKGHLKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESL STVTVLLVGAGETIELVARHLREHKVKKMIIANRTRERAQVLADEVGAEVIALSDIDERL KEADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSV DDLQSIISHNLAQRKAAAVQAETIVEQETSEFMAWLRAQSVSETIREYRGQAEQVRDDLT AKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDDERLTILRNSLGLE >gi|333596725|gb|GL892087.1| GENE 404 452222 - 452833 837 203 aa, chain + ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 3 203 7 207 207 337 83.0 6e-93 MTRMIRLLPLAALVLTACSVNQPKGPGKSPDSPQWRQHQQDVLKLSQYQTRGAFAYLSDE QKVYARFFWQQTGQDNYRLLLLNPLGSTELELNAKPGEAQITDNKGQHYTATDAEEMIGK LTGMPIPLNSLRQWILGLPGEATDYTLDDQYRLSQVNYTQGGKTWKVVYSAYDSKTQPSL PSNMELTQGSQRIKLKMDNWIVK >gi|333596725|gb|GL892087.1| GENE 405 452830 - 453699 744 289 aa, chain + ## HITS:1 COG:STM1779 KEGG:ns NR:ns ## COG: STM1779 COG1947 # Protein_GI_number: 16765120 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 489 85.0 1e-138 MMTHWPSPAKLNLFLYITGQRADGYHTLQTLFQFVDYGDTISIEPRQDGQICLLTPVDGV AHDDNLIVRAARLLMQTASASGRLPAGSGADIRIDKRLPMGGGLGGGSSNAATVLVALNH LWGCGLTTDELAALGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLIVHPGVSIP TPVIFKDPDLKRNTPVRSIKTLLNCEFSNDCEDIARKRFREVDAVLSWLLEYAPSRLTGT GACVFAEFDTETAARQVLEQAPVWLHGFVARGMNTSPLQQAILAQTEFR >gi|333596725|gb|GL892087.1| GENE 406 453834 - 454772 938 312 aa, chain + ## HITS:1 COG:ECs1712 KEGG:ns NR:ns ## COG: ECs1712 COG0462 # Protein_GI_number: 15830966 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Escherichia coli O157:H7 # 1 312 4 315 315 584 99.0 1e-167 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPT NDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVD RVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVRARAIAKL LNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKR VFAYATHPIFSGNAVNNLRNSVIDEVVVCDTIPLSDEIKALPNVRTLTLSGMLAEAIRRI SNEESISAMFEH >gi|333596725|gb|GL892087.1| GENE 407 455038 - 456576 1777 512 aa, chain + ## HITS:1 COG:STM1781 KEGG:ns NR:ns ## COG: STM1781 COG0659 # Protein_GI_number: 16765122 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Salmonella typhimurium LT2 # 1 512 40 551 553 815 92.0 0 MALAIGSGVAPQYGLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLV ATLMSGVFLILFGLARFGRLIEYIPLSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHY LQKVGALFMALPTANLGDAAIGIVTLGTLIVWPRLGIRLPGHLPALLLGCAVMNIVNLLG GQVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDMPGSSFTLSWDSLRALLPAAFSMAM LGAIESLLCAVVLDGMTGTKHKANGELVGQGLGNIVAPFFGGITATAAIARSAANVRAGA TSPVSAVIHSLLVIMALLILAPLLSWLPLSAMAALLLMVAWNMSEAHKVVNLLRRAPKDD IIVMLICMSLTVLFDMVIAISVGIVLASLLFMRRIAQMTRLSPVNVEVPDDVLVLRVIGP LFFAAAEGLFSDLESCIAGKRIVVLKWDAVPVLDAGGLDAFQRFVARLPEGCELRISNLE FQPLRTMARAGVQPIPGRLSFYPNREAALADL >gi|333596725|gb|GL892087.1| GENE 408 456562 - 457620 1118 352 aa, chain - ## HITS:1 COG:DR1628 KEGG:ns NR:ns ## COG: DR1628 COG0789 # Protein_GI_number: 15807649 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 5 91 15 101 185 70 50.0 7e-12 MLIQVGELAKRAGITVRTLHHYEQTGLLLPSARSAAGYRLYNLADVQRLHMIQTLAKAGL ELAEIRDFLEQRSLSLAELLDGQITLLDKQLRSIHTLRNRLVELRTGLTDDATPDLESWL QTLELMNMYDRWFSKEELQQLPFAVEKEALADIWSGLVTEVKHLLEQNVSVTDARATDLA SRWMERLEQDTAGKPEFLTRLNEMHSVEPQMQEQTGITPEITDYITRAFAESKLSIWEKY LTAEEMAFTRAHYFDRMMEWPPLVAKLHQAQRDNLSPASDDAQKLAENWLVLFQSYAGTN PQTQQKFRLAMQQEPHLMKGTWMTPAVLEWLQQAIGVRMQRRVSASDDSQIR >gi|333596725|gb|GL892087.1| GENE 409 457741 - 458016 220 91 aa, chain - ## HITS:1 COG:no KEGG:ECL_01590 NR:ns ## KEGG: ECL_01590 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 91 1 91 91 180 97.0 2e-44 MKRKNASMLGNVLMGLGLFVMVAGVGYSILNQLPQLDLPQYFAHGAVLSIFLGAVLWLAG ARVSGHEEVCDKYWWVRHYDKRCRRDQRKHS >gi|333596725|gb|GL892087.1| GENE 410 458291 - 458875 524 194 aa, chain + ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 352 92.0 3e-97 MTIKLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFYGYTSRINLAGADVR LLVPTTFMNLSGKAVAAMATFYRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDI ISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAARCTEIWLQDG LTKATNRLHAFKAQ >gi|333596725|gb|GL892087.1| GENE 411 459002 - 460021 1366 339 aa, chain + ## HITS:1 COG:STM1784 KEGG:ns NR:ns ## COG: STM1784 COG0012 # Protein_GI_number: 16765125 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Salmonella typhimurium LT2 # 1 336 1 335 363 625 93.0 1e-179 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD PADDIDVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA LKNLTDEDKAAIKYLSFLTLKPTMYIANVNEDGFENNPYLDKVREIAAAEGSVVVAVCAA VESDIAELDDADREEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGA TAPQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGLAS >gi|333596725|gb|GL892087.1| GENE 412 461395 - 462351 666 318 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 13 161 170 326 456 180 56.0 4e-45 MLFGQPTGKPVTTRFVWEGFRLLQEVHGDVPLTYVYSDQDSYDPLARIDGVDAPEIFWFH CQPNGTPERMTDSEGQVRWEGVNSAWGKLLRESETQVSGYSQNLRMQGQYLDRETGLHYN LFRYYDPDCGRFTQQDPIGLAGGINLYQYAPNALGWVDPWGLSRCKNDWNEFQKKSNKRQ FSSRTQASKAYALWKKQDWAALEKFMGDGAWPPNRGFITATKTTLKPGTKVDRYGGWTDA DGFHDSGTFISPAGSSFEGRALQQNTLNKPYSVYEVLKPLPVDSGPAIPWFGQPGRGTQY ETSEAIEALIENGFLRKI >gi|333596725|gb|GL892087.1| GENE 413 463001 - 463261 73 86 aa, chain - ## HITS:1 COG:no KEGG:Ctu_00940 NR:ns ## KEGG: Ctu_00940 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 8 86 900 978 1394 130 77.0 2e-29 MPLINCQYTRNEQHHPENSSPWLLTTRSEYDRLGRLHRRDFFTGNAQRPSPRRWSRRWDY DYRNNLVREERDDNPFSWYRWQYDSA >gi|333596725|gb|GL892087.1| GENE 414 463407 - 463850 143 147 aa, chain - ## HITS:1 COG:no KEGG:ECL_01571 NR:ns ## KEGG: ECL_01571 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 147 14 160 160 233 80.0 2e-60 MHEIIHFQTNTATVVIYDLVSLKHRVNDDADWWSLPEDEVVEINKGNVLFLNVGDDGTYK VYIKNDVEEYIGALFLNVPSGKVFIGAGEDVTGGDLESDDSDAISGEFITLEPGSYEVKY KKQGSDVLISFTKTTITENSLEEGVYL >gi|333596725|gb|GL892087.1| GENE 415 464457 - 465344 512 295 aa, chain - ## HITS:1 COG:YPO3609 KEGG:ns NR:ns ## COG: YPO3609 COG3209 # Protein_GI_number: 16123751 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 13 161 170 326 456 181 56.0 1e-45 MVGGQPTGNPVTTRFVWEGFRLLQEVHGDVPLTYVYSDQDSYDPLARIDGVDAPEIFWFH CQPNGTPERMTDIEGQVRWEGVNSAWGKLLRESETQVSGYSQNLRMQGQYLDRETGLHYN LFRYYDPDCGRFTQQDPIGLAGGINLYQYAPNALGWVDPWGLSRCSSSGKYKPGTILGRT VYKNTVDIHPGVPKSVHPSVHPSIKAKVKDGWTNVDLMKNGYAPIGTDGKQVNLHHVLGQ EPGPMVEILSSTHKLYHKQLHGLIENGGSFRNTPELDRQYNRFRSAYWKLRALDF >gi|333596725|gb|GL892087.1| GENE 416 465931 - 469200 3337 1089 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 181 1085 100 1018 1364 348 30.0 2e-95 MSDNNAARKGDEIIHSSIFADITSIVAEGAAYAVIGAAVGAAATVAAPLLGAGAAAAGVA AIGSSCLLSGIIGGVLANVAGITDDISNAAEGLGNALFPPSPAGKITTGSSNVLTNKLPA ARAAGTLTPADTPSPEPQSPGSFADYAGMLLSAAGQFGSEMWQPSVASAAAGTSPLEEDK VACDKHSGPQYLAEGSKSVFINGQPAVRAKDRSTCEGTVSDDVSPNVIIGGDTLTVRDIK SGKTPGLALGMIALSLLRGRPGKILKNMPCALASAGGGMLADMAVNAVFGSSHPVHAATG VKVLNDDDELDFSLPGRFPLRWQRSYNSLTTREGLFGLGWATTFDSYLTLEKNNATWFDE TGRELSFELPPVDRAFYSISEGIIIRRNESGDVAIADDDGAVWRLYKPTRANPSILRLAS LSDEYGNALLTEWDEHGRLIGLHDEPRAIDVTLRYEDERFPQRVTSASHFDGNQTWPLMK WGYDARGQLASATDASGVVTREYRYNDDDLMVWHRLPGGLESEYRWQKFDHWRVVENRTS TGDGCRFSYDLAAGLTTVDHYDGQTRKHYWNAQNLIVRYVDERGENWRYEWDDNELLTRR IDPLGNAVTFVYDEMGNRVQEIDADGNTRTTTWLEHRALPASIIEADGSATRFLYDEHHG LKRVVDPMGQTSLLRRDEFGQVVEEVDAAGNSRYQEYNEAGQMVRATDCSGRVTQYRYHP LGWLVAEISADGEETRYRYDAAGRPVQLDRPEGWTESLKWNERGLPVKHAGADGKESEFR YDEAGRLTATRNTQGEEVRRRWDSRGRLIALENENGEAYQFRWGADSLLLEEVGLDGVAS QYRYDACGRTIARTFAAGHPEAITHAFAWSASGQLVARTTPEGQTRYHYTPSGLLSRIGL HPALSADAWSAEAEQELVFDYDALGRVTRETGEHGELAWEYDALGNRTSVTLPDGRELKQ FYYGSGHLLSIALDKLSVSDFTRDELHRETSRTQGLLTTRSEYDRLGRLHRRDVFTGNAQ RPSPRRWSRRWDYDYRNNLVREERDDNPFSWYRWQYDSAGRLLVQDGTLPGQEQWRWDAA GNPLEGSAG >gi|333596725|gb|GL892087.1| GENE 417 469204 - 469644 567 146 aa, chain - ## HITS:1 COG:no KEGG:ECL_01566 NR:ns ## KEGG: ECL_01566 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 22 146 1 125 125 220 88.0 1e-56 MKYTLQEGSFTLFPAAWQDNSMNIIRDDESGLSVVVSRGVIPDGSDYEQEFHRQWDVLRP QMGEIAQSEFQHVKAGPDGNINGLEVETTFDRNGQRLWQKQLAVQTPGKSVLMIFTLSAL KAFTEEDEARWSTLKQSLTLNDDRNV >gi|333596725|gb|GL892087.1| GENE 418 469852 - 470289 66 145 aa, chain - ## HITS:1 COG:no KEGG:Ctu_00920 NR:ns ## KEGG: Ctu_00920 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 145 1 145 145 201 60.0 6e-51 MNQDSLWQIIKEMKSVWGKQFEDVSKLFNQPLINNTQEKEDRYTSAPFTLTDGTRISNVD VRLWGNGDNSVSLVSFVINQPCITLDQVKSHFPDLKLSNIPRGNTPGQSVGYRTPTDERG LAWAFSFPVLNQECLGRVVMSRYEH >gi|333596725|gb|GL892087.1| GENE 419 470360 - 472942 2130 860 aa, chain - ## HITS:1 COG:PA0091 KEGG:ns NR:ns ## COG: PA0091 COG3501 # Protein_GI_number: 15595289 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 14 637 18 639 643 500 43.0 1e-141 MLNRITVQLPVEGLLFWKLSGREAMSESFALTLTLLGTDARIDRSKLLGQPVTVTIPTQN LLTPRYINGKVTRVAVSAVELTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKT LLGEHQVNVEDKLTGSYRVWDYCVQYQESSLDFISRLMELEGIAYYFSHEADKHTLVLTD AATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQ AQQNPASPKPGSIDVYDWPGRFVETGHAEFYARIRQERWQVEHQQIQATATAAGIAPGHT FTLTNAPFFSDNGEYLVTAAGYHFEENRYASGEGETIHRTDFTVIPASVSYRPAQSTAWP RTYGPQTAKVVGPQGESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGV QIPRVGDEVVVDFINGDPDRPIITGRVYNEASMPPWALPAAATQMGFMSRTKDGSVDNAN ALRFEDKAGAEQVWIQAERNMDTSVKNDETHSVGGARSHYVKKNELHRVEANQIQAVKGG TEILTGKGKLDAAVEQYVIASGTKLRLVSGESAIELNANGKINLIGKEFNFFVEGDGYIT TGGKLHLNTSGTQPGTTAPGSGHKGDIDAAVQEKFSPNKSAKNPAPAASAPAATRPKPTT KFVSAPPLKGSYVYQNNSYNSDVMPFSEDVVKEINKSPTLQTQLKDLKDKGWAIQPGAAG GGSYADTNNKLIVMDPEHMEDTATTVQTLAHEAGHATYPVAVDSSSKENFINSQLMDEGG ATLNNIKIQREILSNGGIDIDIAGSAENLKAYNSAYDKMVNGELSRIDAAKAIGKVYGKG EIASGTNLNYNDYYGGFYGK >gi|333596725|gb|GL892087.1| GENE 420 473116 - 473550 126 144 aa, chain - ## HITS:1 COG:no KEGG:EAM_0596 NR:ns ## KEGG: EAM_0596 # Name: not_defined # Def: membrane protein # Organism: E.amylovora_ATCC49946 # Pathway: not_defined # 1 143 1 143 144 110 46.0 2e-23 MHWFFFILFMIWTLALIWNGKDLFNKKQWLLAGLMFILVLVATVVIGFTLKWLAQSMSLF SVATAKHYSIILSMSFLCVWGLKVTVVLLCTLFSGIMGGHKRYNAENYEKVSSVTRVAAP GLLIVAKSAVSLGSILMFSGLWLK >gi|333596725|gb|GL892087.1| GENE 421 473714 - 475348 262 544 aa, chain - ## HITS:1 COG:YPO3608 KEGG:ns NR:ns ## COG: YPO3608 COG3209 # Protein_GI_number: 16123750 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Yersinia pestis # 6 215 4 255 954 86 32.0 2e-16 MSECLAAREDDEIAHTASKGWMIAGLVGGAILGAAAVVVTGGTALVAVSAVAAGACAAGG LGELLGSMSWAPRHTTGTLKDGSPNVFINSRKAIRAHLSAGECDEHSGSLQRVAEGLIKV YINNFPASRIGDKLTCSAEISQGSRNVIIGGSKVQTDEISPEIPEWVNWTMLAVGAGAMA VLASPAIALLSTLGAMGGGTVGSYAGGMLFGEGSDGQKWGMLIGSVIGGGAGMKGGARFD AWRAGKPVLEPVKPNISARRAELNEKFGRTGDLNRDINIRANQKIVDDFMRSQGVEESKI PAYRTGIDLEQRMTIETINKGKIAYQNQSPGNWQGNWYSLDESTPATKLGINPEGQVRDT GLIVPKEVKAYQAQQEGEMHRSSATPALDTWSIPDKPFQTEGGGYNGLPLSVIFGLHIMN DKTALNYVDKALILAKKRYAEVKNLNPHAPLLQMYGSIVQQLLFLRDLIEGKEKDKARLW KMTFGMYAAKEFDNSDELFFERLSDAWFIVDQIRRGLKVRLPHEVDANYSIKQQNLKMKY PNEF >gi|333596725|gb|GL892087.1| GENE 422 476160 - 476609 117 149 aa, chain - ## HITS:1 COG:no KEGG:ECL_01556 NR:ns ## KEGG: ECL_01556 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 137 3 140 281 83 38.0 2e-15 MKVRDKVFIFWGCMDALAIVLYCAQSVRHDRIPFISDIHAFSTVVNTLSAGGYSALVILF FIFDFVLLVSLFASAWLFCLSKPFARRLALCQEFLRLVSFRCSVSLFPLALDLVGESNVW LNGILFIFSEFLKIYTLWIFNYERTVSLK >gi|333596725|gb|GL892087.1| GENE 423 476623 - 477369 571 248 aa, chain - ## HITS:1 COG:no KEGG:ESA_03918 NR:ns ## KEGG: ESA_03918 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 4 248 9 253 253 362 72.0 6e-99 MAFVAICFLFMIQGCKQDMDLNPQDYFSGQQLELAKAIEEGDVDAVKTLAPDSDLDQPGK QDMTLLFWAIGNAINDKKTSTHLKVITVLVQAGADPLQPRPQGKSSPAEFALKGDSADWI DAMLDGGLSPNVKDKVFHEPIVFQSLKAKNTETLEAMLDRGADVNSTNSLGKTLVFDALD NQAYDHVLLLLDRGADPSIKAKNGWSMSNALADALNGLDRGSEQYERLNEIKEKVIQKGG EWPPAPVK >gi|333596725|gb|GL892087.1| GENE 424 477381 - 478847 1252 488 aa, chain - ## HITS:1 COG:no KEGG:ECL_01553 NR:ns ## KEGG: ECL_01553 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 487 1 471 472 763 78.0 0 MYNIKFVYLFHENVSPALFAKIIRPSVAGQWIMSVPDHSLRSLFTRYDLLRTITGANPYQ SGRDTRTLIAQDLEMGRVVAIDESFRDWSSVTEIFYINAKGQLQAASLVGLGWYPVSTIV DRYETMVRTYGSRPAPTVLPKQVVKAKTAQVPDEPTPGKDGKTYASQLQKMSKAERWQAR KDLIAKGSNSLYPDAQIAAKRLAANNIAVEKAKLAENIYKTVNPLETTPDVPEGWTDISN DDALLGKFGLNKSMLFDDDTSPNFLARVYQPKPEVFGTDMNPTLVFRGSREPGFASLSEN VSSLLTKGELAPVVNGADWSNNFSQGMGMASDYYKKAVSIGKELARSGQNIDIAGHSLGG GLASATSMGSGKAGWTFNAAGLNAGTVEKYGGKVLGSTDNIQAYRVEGELLTKIQEVNAW EDLKMMKGHVPSWILKEEISALSPNAAGIPHDLPGGTGSALDRHGINQAIDCIEQQKDED MSIIGSRL >gi|333596725|gb|GL892087.1| GENE 425 478873 - 480306 1564 477 aa, chain - ## HITS:1 COG:RSc2157 KEGG:ns NR:ns ## COG: RSc2157 COG0515 # Protein_GI_number: 17546876 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Ralstonia solanacearum # 20 322 2 308 323 163 33.0 9e-40 MTDNDNNRTVPNALPVGYRFNEFEIKEVIGGGGFGIVYRAWDHQLERTIAIKEFMPSSLA VRGEDMTLVLRSERFGKAFSAGLNSFIQEARLLARFNHPNLLHVLRFWVQNDTAYMGTLF YSGTTLSRLREEKPELINEAWIRRMLPMLFGAIKTIHDEGYLHRDISLDNIQIQDNGLPV LLDFGSARRTIGNLSDETETMLRPGFAPIEQYTDDNESEQGPWTDIYALGAVLRTLIVGS PPPVSVVRSIQDTCKPLVELMPQGYSIPLLQAIDKALALHMEDRPQSIEEFAALIEMPVA GIDEVLTAKKTGTMLVPVEEEASASALDWRRYKLPGLVAAGVLVGVVAGAMLFGGGGQET PEQTAQTPAVSPPAETSAAAETRPATAEVSEPVTPPATAQQSAPPVDASPVALVYIRMLD GETLKVNGESKALRPGNNGYASLKLPAGETRIELEGNGRTRTQTLDIAKPGTWLVNP >gi|333596725|gb|GL892087.1| GENE 426 480331 - 482946 1294 871 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 8 865 1 807 815 503 35 1e-140 MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIRHF ALDEQQLTRDIVAALDALPRGASSVSDLSEHIDSAVERAWVYGSLKFGVSRIRGGHLLIG ILKTWNLANVLKSISAQFTRLNVEVLIEQFDAICASSKESQQATAAADAPAGAVPAAQGT LAQYGQDLTSRAREGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA LRIADGDVPEPLQNVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIILFIDEI HTLIGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHE PDEAKAVLMLRSTVSPLETHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACAR VAVSQSAPPAQLEDCLRHLAALDVELEIAEREARVGAGDPARVATLTDERDAYESKREAL ARRWEEERTRVQEIIRLRAALFAAGDEDTAELRSQLAEQQQALHTLQGDEPLLFAAVDEN VVAAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLDLIARRVKTSRAKLDDP NKPIGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQEAHTVSTLKGAPPGYV GYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRHIDFRNTII ILTSNVGTDLIAAMCADPDLMPEPDALSGALRQPLLEVFPPALLGRLLVVPYYPLSDEML GQIVRLQLGRIQRRLEENHNIISEFDDSVVEQIVQRCTEVESGGRMVDAILTNTLLPQMS QILLTASRSDEQYRRLHVTCEQGEFHCQFAA >gi|333596725|gb|GL892087.1| GENE 427 482985 - 484028 1050 347 aa, chain - ## HITS:1 COG:PA0089 KEGG:ns NR:ns ## COG: PA0089 COG3520 # Protein_GI_number: 15595287 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 24 330 17 319 348 228 43.0 1e-59 MSEVAPATLRVHRLTPLPDAFWRGVRETPWRYDLFQLLRRIDAQGGERYPLGRAPLPKFE PLRIGQQPSMGFAPSTVAEVRQREENGLHDVSILSFGLFGPNGPLPVHMTEYARERIHHH QDHSLSAFADLFHHRLTLLFYRAWADAQPAVSLDRDDNRRFEGYLASLIGMGQPGQMAKG SLSAHARFTHAGHLTRHGRDPEGLEKILRNYFNVPVRLVANVPQWMPLSTREQAQLGEGR RLPRMGESAFLGIAVRDVQHKFRLEIGPLSADDYNRFLPGEGWVTELRDWVRQYAGVEFE WETRVILRADAVQGATLGSAGRLGYNTWLGLQPQPVPRGDLVYRAER >gi|333596725|gb|GL892087.1| GENE 428 484025 - 485896 2190 623 aa, chain - ## HITS:1 COG:PA0088 KEGG:ns NR:ns ## COG: PA0088 COG3519 # Protein_GI_number: 15595286 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 620 1 616 619 513 44.0 1e-145 MESKLLEYYNRELAYLREMGAEFAERYPKVAGRLGMRGIEVADPYIERLMEGFAFLTSRV QMKMDAEFPRFSQRMLEMIAPNYLAPTPSMAIAEIQPDSSRGDLSKGFIVPRGTMMDSLA LKKTGVTCSYTTAHEVNLLPLKIERIELGGVPADLPLAQLGLSQRGISSALRIRIACDGP QHLGHLDFDRLEFFLSGPDIEALKLLELVMEHHAGIVCQTVSKQPQRQLLSSDALRQEGF NADQALLPDDLRNFDGYRLLQEYFAFPARFRFISLSGLGKLIQRCEDEKAFDIFILLDKS DDQLERVVDASHLALHCTPVINLFPKVAARQKLSESQHEYHLVVDNIRPLDYEIYAVKKI YASADGQRDDQTFRPFWSTWSGDAGNYGAYFSLRREQRVLSEHALRYGTRTGYIGSEVFV SLVDAQHAPWQENLRYISAEVLCTSRDLPLMLQQELGQFIMADSMPVKALTLRKGPTPPR PALAEGFSTWRLISQLQMNYLSLMDSENEEGAAALRQLLGLYANLAETPVARQVEGVRHC VLEPVHRRVPEPGPVVFARGIGITLTVDERAFSGASPWLFGSVLERLFARLVSINSFTEF TLKSQQRGEIGYWAPRMGKRALV >gi|333596725|gb|GL892087.1| GENE 429 485899 - 486462 669 187 aa, chain - ## HITS:1 COG:PA0087 KEGG:ns NR:ns ## COG: PA0087 COG3518 # Protein_GI_number: 15595285 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 27 180 7 158 169 121 43.0 1e-27 MSNPAGEGDLLRSGWQARSRQEKVGARDKMQPSLLDRLTDNDPEKKRESANSNLITHAAL RRNVLRDLQWLFNTINHDASSDLSGLTQVSRSVVNFGVAPLAGKRMSDIEWHDIQRKLTE AIINFEPRILPQGLQVRCVSDTSSLDLHNVLSIEIKGRLWCVPYPLEFLFRTDVDLENGH FELKDAG >gi|333596725|gb|GL892087.1| GENE 430 486455 - 487267 1017 270 aa, chain - ## HITS:1 COG:YPO2727 KEGG:ns NR:ns ## COG: YPO2727 COG4455 # Protein_GI_number: 16122931 # Func_class: R General function prediction only # Function: Protein of avirulence locus involved in temperature-dependent protein secretion # Organism: Yersinia pestis # 1 266 1 266 268 134 34.0 1e-31 MNTLYQRLAGESISDALLRLEADIKARPADADLRAAFVQFLILSGNWARALTQLKSWLVL KPQAKPTVTLLEQAIQGEQQRARVFAGEARPAMPEAQWPWLTTLAQALTESAGQAQALRL SALEQASASRGQVTLEKEESHTFEWLMDGDARLGPVCETLVNGRYFWVPFCAIDTIRFQA PASVTDLVWRHALVRLTDGTEQVCQIPARYPFADGAPDSVKLGRTTEWLPLDDDGTLYEG LGQKAWLSEQSENPLLTLSLVTFTTDGADE >gi|333596725|gb|GL892087.1| GENE 431 487277 - 488269 1084 330 aa, chain - ## HITS:1 COG:no KEGG:ECL_01546 NR:ns ## KEGG: ECL_01546 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 330 1 328 328 543 86.0 1e-153 MKLWLSGLALLTVATTAQAENFRIVQSPAQKLDIWIDNIKDNTPQSWCKSDVALRIVANG KKEVSVLENFVPRLGSLLEHQCSKLNTLNWTLNDPEGTTLARGTAAKAQDWALVVKQQET AAATTTTTTSGALLPPDQNPETHTVAADRTPWQEFTLQDGCHLRTFWEGGASAPALFIPD SDTTRCGNGSWLSGHTVVTQNRNGTQKAIPVTYIHGFPVMGLNNAVDPESALITSVNKER MVFSTQNSDQSWMILPYDSTLNGWKSNGTVAVEITREIASDDARLQARIAEVKKIWSAWV APGAELNVVLIDTLRPQLRDPAVGAWRAAN >gi|333596725|gb|GL892087.1| GENE 432 488286 - 489083 843 265 aa, chain - ## HITS:1 COG:RSc2158 KEGG:ns NR:ns ## COG: RSc2158 COG0631 # Protein_GI_number: 17546877 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Ralstonia solanacearum # 1 248 1 251 304 98 31.0 2e-20 MNIATASLSRQGTRASNQDQTGETIGERSACFVVCDGIAGLPGGEVAAELARNSIISRFD GDKHLNAQHIRDYVQTANRTILSEQQAVQDYRRMGTTLVSLFIDRDYRLAYWAHAGDSRL YLFRRGWLWHVTTDHSLVQQMKDAGHQTDDLNSNLLYLALGIENGGPEASYSDVVQVEDG DAFLLCTDGFWHGVSEEQMKQSLHMVNTPQEWLTLMNQIIQKNAEQEGNAQDNYTAVAVW MGNPQDTTLLHTLSDAAQFLPCGTD >gi|333596725|gb|GL892087.1| GENE 433 489080 - 490849 1872 589 aa, chain - ## HITS:1 COG:PA0081 KEGG:ns NR:ns ## COG: PA0081 COG3456 # Protein_GI_number: 15595279 # Func_class: T Signal transduction mechanisms # Function: Uncharacterized conserved protein, contains FHA domain # Organism: Pseudomonas aeruginosa # 387 573 303 488 497 102 34.0 1e-21 MRFTIISTKPGHQPPQSSCDFYAPGGTIGRGTDNNLVLPDNDRTISRLQAIVHVDASGEC RVTNRGSVTRVVLNDIPLERGRQVELQDGDILGIDDYRIEVSELIHDTQPVSRMAASMQQ ARPSATPAPAPQPKPASAAPRGKAEPTAVPSEIWDSLMQEFSISDSISSNRAKPQPAASH DPFSQPAAPERNADDPLAMFNDADPSLERKNVDPDTLFSDDALFKKESIFDDVTPSTLVQ PDESKPAQPKEEASDELDPLALFGGTASAPAARHDDPLGLMGGAPLTHPDDIAAEKPEPE PQAAQEEDALASSPLFDPEPSEPQNAPLTEEEPVRPDYAGFTMPTPQAVARSSAQTPKGR LRIDPVKNAAAPAASAQTGERGEVLQGELLEALLEGMGLSEMQPVPQFDRENMRQLGQIL GMFSQGTVALLSSRSILKRGVKADMTMVLDDANNPFKLLPTGKTVLIQMFGTPMPGFMPP TKSVRDALIDLQAHQLGMISGIRAIIAAMLQSFNPEQLEEQAKQNGMTSRLALPGSRKAA LWDYFVRSYGETAGEIEDDFHTLFGEAFLHAYDMEVNQYKDSQSGSEEK >gi|333596725|gb|GL892087.1| GENE 434 491362 - 492351 179 329 aa, chain - ## HITS:1 COG:no KEGG:EAMY_3318 NR:ns ## KEGG: EAMY_3318 # Name: not_defined # Def: hypothetical protein # Organism: E.amylovora # Pathway: not_defined # 7 323 5 332 336 299 49.0 9e-80 MASPSNVAPGYCVVQQPGTLDFQARQLFGTARNEKSEYFMQLNKDTAWLKPGQILIVADP LGDNQTQQINSLAIAKKKVTNALATLDGATAEFLKNNYDNIKAITGWGDTIVGGVSGTGE SYFKQIENILIKIEATYQNQYRTQGALFGQQFYAERNALFAQLKPLLNKITKKQLKFKDY ADLKRALGLSTKSIVHEWSTVGIGAIPGYSTYIDRAARISSYLKAGGWVALGFSFMNTSN EVYHACTTGREHECSRVAVTEYSKFGGGVAGAALGSSLAAPVCLALGVPTAGTGTLICGL VVGAVGAAGGTQIGGFAGEQLNNLIFSGE >gi|333596725|gb|GL892087.1| GENE 435 492394 - 492747 207 117 aa, chain - ## HITS:1 COG:no KEGG:ECL_01543 NR:ns ## KEGG: ECL_01543 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 117 1 117 117 161 73.0 1e-38 MKRLLAFVLALNTSYTIAHTLPDVNTFSQQQIFENWVQNRCIGKIADSATLKNDAKASAA AWLEVSNLPAENFEKADEVINSLLKQKLGGTAPVSYEVLKCSLISHSDAIRELNVQK >gi|333596725|gb|GL892087.1| GENE 436 492744 - 493226 205 160 aa, chain - ## HITS:1 COG:no KEGG:ECL_01542 NR:ns ## KEGG: ECL_01542 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 160 4 163 163 308 88.0 7e-83 MRPAFGAAWNRFREVNVNVETVGKLLGGKVQHNIEAGIFQNACPIRMSYVLNYCGVPIPS NSRYATVTGSDKKRYMYRVKDMIAFLPTVLGNADMTVTSPTPSQFAGKQGIIIFSGHGWS DATGHVTLWNGNICSDDCHFLGSPGNGSFIPGSATLWSLK >gi|333596725|gb|GL892087.1| GENE 437 493285 - 493767 552 160 aa, chain - ## HITS:1 COG:STM0276 KEGG:ns NR:ns ## COG: STM0276 COG3157 # Protein_GI_number: 16763659 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Salmonella typhimurium LT2 # 1 159 1 160 161 111 37.0 5e-25 MAIDMFLKVEGVTGESKDSNHTGWTDITSFSWGASQPGNMSVGGGGGAGKVNFNDLHVNA LIDKSTTAILKHCASGKHLTKVELSVCKAGGQQVEYTRITLEDVLVTSVQYTGADNGDTV GVTYAFQAAKVKQQYWEQTTAGGKGAESSAGWNIKENKEA >gi|333596725|gb|GL892087.1| GENE 438 493835 - 494056 67 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLNKTVHILPLPHIKRPVSFDSLTFLRNNGMNVKSLLLCFIVEPVKDSINNLAVFLAGW RCAYPAYIEQRYQ >gi|333596725|gb|GL892087.1| GENE 439 494142 - 495641 2191 499 aa, chain - ## HITS:1 COG:YPO2938 KEGG:ns NR:ns ## COG: YPO2938 COG3517 # Protein_GI_number: 16123123 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 495 1 497 500 795 74.0 0 MSNQTQQHDQQAGQAFSQDEFSALLNKEFRPKTDQARSAVESAVKTLAQQALENTVTFSN DTYRTIQNLIAGIDEQLSQQVNQIIHHEEFQKLESAWRGLSYLVNNTETDEMLKIRFMSI SKQELGRTLKRYKGVGWDQSPIFKKIYEQEYGQFGGEPFGCIVGDYYFDHSPQDVELLGE MARIGSAAHCPFITGTAPGVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLG LVMPRFLSRLPYGIRTNPVDSFDFEEQTDGANHNSYSWANAAYAMAANINRSFKEYGWCT SIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDF AAFIGAQSLQKPAEYHDPDATANARLASRLPYLFACCRFAHYLKCIVRDKIGSFREREEM ERWLNDWVMNYVDGDPANSSQETKSRKPLAAAEVQVQEIEDNPGYYAAKFFLRPHYQLEG LTVSLRLVSKLPSLKTKDA >gi|333596725|gb|GL892087.1| GENE 440 495645 - 496169 770 174 aa, chain - ## HITS:1 COG:PA0083 KEGG:ns NR:ns ## COG: PA0083 COG3516 # Protein_GI_number: 15595281 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 164 1 164 172 228 73.0 4e-60 MAMSNSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKPVENLPAVDER KFLEIDIDNFDERMKALKPRVAFQVDNTLTGEGKLNVDLTFDSMDDFLPDAVARKVEPLN KLLEARTQLSNLLTYMDGKNGAEELIAKILQDPTLLKSLSQLPKNDESAKGSEE >gi|333596725|gb|GL892087.1| GENE 441 496245 - 497261 1113 338 aa, chain - ## HITS:1 COG:PA0082 KEGG:ns NR:ns ## COG: PA0082 COG3515 # Protein_GI_number: 15595280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 335 2 340 344 135 34.0 1e-31 MNIDDFLAPISPDNPCGENLEYDADFQAMGQASQGKAEQQFGDTIIPAEPADWNTVEKLA TSLLGHTKDLRVMLALTHAWTRRRGLAGYADGLLLVQEALSRYWEQLYPLLEEYGETDPF YRINALAGLSDKSDLTVAVRNASLLRSNGDEISLRDAQALLDGSKTECPDYPGGRPRLID ELARGDQPGTEAVIVINERLLAIRERLTGYLGESGVPEMEQLLKTVGLVSSACQVTDISK LLPNRDAQAEQHAEPQPVAAQPVQQVTDWRSVQVTSRADAQLMLEKAKQYFAQYEPSHPA PLMIERVQRLSELNFMDIIRDLAPDGVNQLENIFGRRE >gi|333596725|gb|GL892087.1| GENE 442 497273 - 497989 706 238 aa, chain - ## HITS:1 COG:PA0076 KEGG:ns NR:ns ## COG: PA0076 COG3913 # Protein_GI_number: 15595274 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 7 154 1 147 226 67 27.0 2e-11 MTNTPAMNRYSWYGKLPSAGDFLQRRFPDTLQRQWSHWFQVGLLAWQQEEQRSGERPFSK APVWNFVVPPMLGSQMIQMGCLLPGRDSVGRHYPVCLQLSFTPAEWSSRLLGQAESWYQQ LGRLGLHAVRNSYSASQLDEMLMTIPAPQPVEPQKRSDILDVIGYDDEGQSTLGWPQAAE CFDPLRQTSYWWTNRCDGYPLYTHVHSGNFTGQLFTLLFDPAGGARPGRHGLYPPMFE >gi|333596725|gb|GL892087.1| GENE 443 498006 - 501626 4346 1206 aa, chain - ## HITS:1 COG:PA0077 KEGG:ns NR:ns ## COG: PA0077 COG3523 # Protein_GI_number: 15595275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 78 1199 1 1088 1101 626 35.0 1e-178 MLTTLLSILTNRILWSFLGVTALAAVIWMIGPLLSIVDTRPLESEQNRVISIAVVYLIWA QSHILPRLYNAWLNRKLMDKLNENTTSPEAADPQKRLNSEEQILAGRFDEAAQMLKKAHF SKAGHGAQWTQRFSTQYLYQLPWYVIIGAPGSGKTTALANSGLQFPLADRFGKTALRGIG GTRNCDWWFTNEAVLLDTAGRYTTQESEQVQDAGEWLEFINLLRKYRRRQPINGVIITIS ISDLLSQSAEASRQQAVNLRQRLSELHEQLGIRFPVYVMVTKADLLKGFRAWFADYDKAQ RDQIWGFTLPWEQTKHADYDLMGNFQQEFSLLQQRLDAGLPETMLKEHDAKTRAEAYLFP QEFAALRPLLADYLSTVFARSNFETEFSPRGIYFASGTQEGMPFDRVMGELNRALSLPEG EESTRWDSVSKEAPIPGAKGQSFFIKNLLQNVIFQEAGIAGENRWWELRNRAVMWSGYAA LLALLVILGGLWLTSYAKNKAYLEEVDAKVPMLEQQSKALQNQPQRDLFALLPLLNSLVD LPKSEAFDVNDPPVSRRMGLYRGDDVSDASQSLYQKALDQMLLPAVAMHITTWLRNDNGS DVEYSYEALKAYQMLYQPKHYDGKFLHSWVMLNLQRNLPQNVTQAQLQELEWHLTQLLEP KIQASPYAQDEDLVARERALINQQPLSTRVYGRLKRLLEHDENLKPVSLSDLGGPQSELV FSRKSGKPVSEGVPGLYTPDGYWKSFNDQIDSVTTALHEDDAWVLGATTAQEDKQQIDNA VRQLYMRDFIVNWDRFLADIQLNNSADLSQRINTARLLSGTNSPLRRLVLNLSKVLTLSR TAPAPEDAQKAEAQSNRATRTLEALFSNGDNAPTQGAVVTQAPEQLVTDHYAPMIELAQP LEKGGKTIVFDDFLKQVDELYRYLTAVQDAANSGMPAPGGDAISRLQASAGRLPGGLQTM FSNMAVGASSDTQRRDLENVRKRINVEVGGFCRQAIAGRYPLVRSASTEVTPDDLARMFA PGTGLMDTFFRDNLTNKVDTTQANWRFMPGIDGKTLPGSEGLLRPFQQAQSVRDAFFANG ATTPSFKVTVRTVRMDNTILNLTLDVDGQLLRYSHGPQAVQIMTWPGPGGTNQVRMQLGL ANGSTATLVTNGSWALNRFFDKARTSPGAGSLSRQATFNVDGHQVTLEFAPNSIRNPFQL PRFSCP >gi|333596725|gb|GL892087.1| GENE 444 501629 - 502867 1442 412 aa, chain - ## HITS:1 COG:PA1668 KEGG:ns NR:ns ## COG: PA1668 COG3455 # Protein_GI_number: 15596865 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 20 239 61 279 289 174 41.0 2e-43 MQERQDTGSDAVFTGASGNNQLVAAANPLLNAIPQIRHSVSHDDQVGLRQRLIDEIRRFE VRCQQAGLPYEVIVGARYCLCTALDEAAALTPWGSSGVWSSNGLLVTFHNETWGGEKFFQ LLARLSQNPREHILLLEMINYCLLLGFEGRYRVLDNGRTQLETIKQRLWQMIRGVRGSYP PPLSPHPEDRPVLRKLWRPMIPLWACVALVGFIACLFYIVLNWRLGDNTSPVLAKIYQSQ LPETTIQQPARQLPAVLNLRGFLKPEIDAGLVAVKDEADRSVVILKGDGLFASASTVVRD RYEPVIDRIAQAMNNVSGKILVVGYSDNVPIRSARFASNYELSLERARSVQKQLQGSLSQ PERVKAEGRGEINPVAPNTTPENRARNRRVEITLLVSPENTQAELNGLPQGN >gi|333596725|gb|GL892087.1| GENE 445 502885 - 504228 1339 447 aa, chain - ## HITS:1 COG:PA0079 KEGG:ns NR:ns ## COG: PA0079 COG3522 # Protein_GI_number: 15595277 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 443 1 443 444 376 44.0 1e-104 MTKAEKVVWTEGMFLRPHHFQRTESYLLNHVREWGALQRSYLWGFLDLELDEAMLRQGCI ALSYCSGLLPDGTFFQVRSDRNGPAPLKIPDNLTNEKVVLALPVRRGGREEVIFSEEQAS LARFITFEQEVEDDNAMSVGEATVQFGRLRLTLMLEKDLTAEWTAIGVAFVTEKRNDNHV RLDNSYIPPMLNANNSPQLYGMINDLHGLLVQRSQQIGGRLRQPGRFNTSEMVEFTLLSL INRHLGDVSHLKTLPLLHPEALWRSWLPFATELATWTPQRTAESILPVYDHDDLAVCFSK LMLMLRQGLSLVMEDHAIQLPLHERSHGLNIATVPETSMVREFGFVLAVKANVPGEHLQT HFPAQMKVAPVSKIRDLVQLQLPGIMLRAMPVAPPQIPWHAGYSYFELERGSELWHEMDK SGAFALHLAGEFPGLDMEFWAIRSPTE >gi|333596725|gb|GL892087.1| GENE 446 504257 - 504736 303 159 aa, chain - ## HITS:1 COG:PA0080 KEGG:ns NR:ns ## COG: PA0080 COG3521 # Protein_GI_number: 15595278 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 7 125 7 130 154 75 35.0 3e-14 MWFPFFALIFALIGGCTSSSHSDPSRYNLQFQAHPQINDSAPLKVRVLLLKSDADFMSSD FYSLQNNASATLGANLLNSDVFFLMPGQLSKTLSGQSSPEARYIGVMAEYQALDGKKWRV SLPLPVPGENAIYQFWKWSADELQASVFLDVNGIRVISQ >gi|333596725|gb|GL892087.1| GENE 447 504784 - 505278 494 164 aa, chain - ## HITS:1 COG:no KEGG:ECL_01532 NR:ns ## KEGG: ECL_01532 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 164 1 164 164 311 91.0 8e-84 MKLRVLLSLLFVMAVAGCKAPQKPAITDDTIVTSQVNGITLTHRHAVTPPAEFTQVNEPY RAMYPASLMSRPDYGGKVIRTLETGKTYVVLGQVEHFWMALADEGSEQLIGYVPMRAVIK ADQYEATVRKQALRPKARKKTTCVDVDGNSKACKDSANGTWILN >gi|333596725|gb|GL892087.1| GENE 448 506137 - 507117 988 326 aa, chain + ## HITS:1 COG:PA1850 KEGG:ns NR:ns ## COG: PA1850 COG4977 # Protein_GI_number: 15597047 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Pseudomonas aeruginosa # 6 320 10 330 334 209 39.0 8e-54 MKKILIIVPDGGMLFEAAGIADILMQANRLHPDGLAQPRYRIIIATTQPHLVIHGQSGLN LLADYRLPELDPRAPLDTIIITGRGMNEQESTAVVDWLHLAAPHARRVASVCGGALLLAQ AGLLNGRRATTHWRLLETLKTCYPAVNVEGGPLYVQDGPVWTSGGVSSGFDLTLALVEDD YGFTLARNVAQDMVMYLRRPGGQLQFSRYNLEQSGATGPVSELQSWILQNLTADLCVEKL AERVAMSPRNFTRVFTRDVGVPPARYVTEARLAAARQLLEQTPDPLDVIAEKSGFGTSIN LRRVFEKQLHLTPGEYRQRFHCRRMA >gi|333596725|gb|GL892087.1| GENE 449 507196 - 508206 1335 336 aa, chain + ## HITS:1 COG:BH3560 KEGG:ns NR:ns ## COG: BH3560 COG0057 # Protein_GI_number: 15616122 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Bacillus halodurans # 3 336 4 335 335 391 60.0 1e-109 MVKVGINGFGRIGRNVLRAALGNPDLQIVAINDLTDSKTLAHLLKYDSLLGTLPVPVEAA DGALQVDGQRITVFSERDPANIPWKDAGVEVVIEATGFFTEREKAAVHITRGGAKRVIIS APAKNDDLTVVMGVNHTLYDPGQHVVVSNGSCTTNGLAPAAQVLHQQFGIEHGLMNTTHA YTNSQALHDQPEKDLRGARAAALSIVPYSSGAAKALGKVIPELDGKLTGYSLRVPVPVVS IVDLTVTLSRNVTAEEVNDAFRQAAASGPLKGILGYSDEPLVSSDYQGDPRSSIIDGLST LVIGGNMVKILSWYDNEWGFSNRLVDLAVLMDKKGL >gi|333596725|gb|GL892087.1| GENE 450 508294 - 509631 1220 445 aa, chain - ## HITS:1 COG:no KEGG:ECL_01523 NR:ns ## KEGG: ECL_01523 # Name: not_defined # Def: putative glycoporin # Organism: E.cloacae # Pathway: not_defined # 1 445 1 459 459 674 73.0 0 MQLKKMVVLVGALCSGSLFAAQNATSIDEKLAQLEAQIEALKQQQAASQQVASVVVQSEE PVNKDAPPKLTLSGFGDIKFYGDVEFNMDAASKTGSLTSVKQSANSDWAPGDKERWDING RILLGFDGYRKMDNGHFAGFSVQPLGDLAGQMYLDDAVFFFGTENDWEIKVGRFEAYDMF PLNQDTFVEYSGNTADDLYSDGYGYIYMLKEGRGRTDSGGNFLMSKTLDNWYFELNTLFK DGSDLYVDQRYHGAELENDKNVAYVRPVISWQDGPFSTAIAMETNLVNNAYGYRDDAGRW VDQSDRTGYGFTMTWDGLKTDPEDGVVVNLNTAYLDAADETDFTTGINALWRNVELGYIY AHNEIEEFNTSTFDAECENDCWITDPGEYDIHTVHASYLIPNVMKMKNFNIYLGAYASWV NASPKEGSDKNDDRYGGRVRFKYYF >gi|333596725|gb|GL892087.1| GENE 451 510084 - 511751 1800 555 aa, chain + ## HITS:1 COG:treA KEGG:ns NR:ns ## COG: treA COG1626 # Protein_GI_number: 16129160 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli K12 # 3 555 8 562 565 837 75.0 0 MLRPGLLHLALAGALFGVTALGYAEDQPASQQSSPDILLGPLFNEVQSAKLFPDQKTFAD AVPKSDPLTILADYRMQHTQSGFDLRHFVEMNFILPKEGEKYVPPEGQSLREHIDDLWPV LTRTTDKANKWDSLLPLPKPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKIGDMVDNFA YELDTWGHIPNGNRSYYLSRSQPPFFSLMVELLATHDSDALKKYRPQMEKEYAYWMEGAD GLQPGQANKRVVKLDDGSLLNRYWDDKDTPRPESWLDDVTTAKNNPDRPATEIYRDLRSA AASGWDFSSRWMDDPQKLGTIRTTSIVPVDLNALMFKMEKLLARASQEDGDTASANKYDA LASARQKAMESHLWNDKEGWYADYDLKTGKVRNQLTAAALFPLYVKAASQDRADKVAAAA SSRLLKPGGISTTTINSGQQWDAPNGWAPLQWVAVEGLQNYGQQKVAMDVTWRFLKNVQH TYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWSNGVTLRMLDMVCPKEKPCDSVPENQ PAANDDVAPAKQAAQ >gi|333596725|gb|GL892087.1| GENE 452 511842 - 513944 2379 700 aa, chain - ## HITS:1 COG:PA2466 KEGG:ns NR:ns ## COG: PA2466 COG1629 # Protein_GI_number: 15597662 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 48 700 165 820 820 322 33.0 2e-87 MSTSRFALCALAGAVTLALQTQAFAEESTMVVTGTEQGSALPGWTNSATKSAVAESKTPQ VINTIAAKEIEQRHASSINEILRYAPGVSTEVRGSTSYMSEYKIRGFNVEQEFYNGLQLP YNVTGNTKARIDPLLVESVDILKGPSSVLYGGGSPGGLVNIQSKKPQKEAKTELGFNTGN RNLKEGYLDSTGQIANSDWNYRLLGKATESDEQAHTTRYENYLVAPSVTWQPDDKTRLTI DALAQNTPSLTPSDPMPLSYLRSKYADRRDYAGDEWSGFKQRQWMVGYSFEHEFDSGWGF NQKARYFDVDTHQRSAYSTGTGSEVYQLNRFAYTTDEDLQSFNIDNQVTRTVALGEWKHH LLAGFDYQKLNSHFHYRYASSTPGIDMRNPDHAQIDNDALGLYTAQKNRLSYQQNGYYLQ DQIAFGGLNVLASLRYDDYRSVTTNYLQNGDKAWVSQDRLTKRLGALYAFDNGLSPFISY SEGFAPVSPQGTLTAKDVKPTTSKQVEGGVKYLLAEYATTFTASVFNIRQKNVVTSDPGF LNYRQTGEVESKGAELSAVSRPTDNLTLIANYAYTHAINTEDDKYQGKRPTQVPENAFNL WGDYTFDSTPLRGLTLGAGARYTGPMEISPANDAGKLGGTTQYDLAASYRMGELAPSLEG LTLKASAQNVTNKETLTCYDATNCWIGRDRTFQVGASYSF >gi|333596725|gb|GL892087.1| GENE 453 514105 - 514836 760 243 aa, chain + ## HITS:1 COG:STM1798 KEGG:ns NR:ns ## COG: STM1798 COG5581 # Protein_GI_number: 16765139 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted glycosyltransferase # Organism: Salmonella typhimurium LT2 # 1 243 1 243 244 352 71.0 4e-97 MSSYSEQFLKQNPLAVLGVLRDLKKGEVPLRINWSTSQFISKILDVTAEHLIVDLGSQND ENRAALQAKNLSVMAETQGAKVEFVLPRLTTIAYQGLPAFIAPLPANLWFVQRREYFRIS APLHPAYFCKAKMPDKKEIRFRLFDLSLGGMGALMDTPKPEGLVEGMRFSQIELDMGGWG RFWFDAQLIAISERKVVDSKNETITTPRLSFRFLNVGPGAERELQRIIFSLERDARERAN KVR >gi|333596725|gb|GL892087.1| GENE 454 514876 - 515379 581 167 aa, chain - ## HITS:1 COG:STM1799 KEGG:ns NR:ns ## COG: STM1799 COG0741 # Protein_GI_number: 16765140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 167 37 203 203 281 80.0 3e-76 MQWMPISEQAGKAWGVSPRLITAIITVESGGNPTLVSKSNAVGLMQLKASTAGREVYRYM GWKGQPSTSELKNPERNISMGTAYLSILEHGILKGIDDPEVMQYALVVSYVNGAGALLRT FSSDRKEAIEEINDMDKDEFFEHVVKNHPSAQAPRYIWKVQKAMDAM >gi|333596725|gb|GL892087.1| GENE 455 515595 - 516509 1106 304 aa, chain + ## HITS:1 COG:ECs1688 KEGG:ns NR:ns ## COG: ECs1688 COG1619 # Protein_GI_number: 15830941 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Escherichia coli O157:H7 # 1 303 1 303 304 463 73.0 1e-130 MPQFHLIAPSGYCINQEAAQRGVQRLLEMGHQVENQTIIPRRMQRFAGTEAQRLSDINSL VTLEGKNNIVLAVRGGYGASRLLESIDWAGLAARQQQDPLLICGHSDFTAIQLGLLALHN VITFSGPMLAGNFGAPELDAFTQDHFWRALQNPTFTIEWQGSGPHWECEGQLWGGNLAML VSLMGTPWLPQITDGILVLEDINEHPFRVERMLLQLYHAGILDRQSAIVLGSFSGSAPND YDAGYTLETMVDFIRSRLDIPVIAGLDFGHEQQTVTLPLGARARLTHDNSGSRLTISGHP VLKA >gi|333596725|gb|GL892087.1| GENE 456 516733 - 518340 2006 535 aa, chain + ## HITS:1 COG:STM1801 KEGG:ns NR:ns ## COG: STM1801 COG3263 # Protein_GI_number: 16765142 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Salmonella typhimurium LT2 # 1 535 43 577 577 908 90.0 0 MLAGIDGIGGIPFDNYPFAYMVSNLALAVILLDGGMRTQASSFRVALGPALSLATVGVLI TSGLTGMMAAWLFNLDIMEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSND PMAVFLTITLIEMIQQHETGLSWMFAWHILQQFGLGIIIGLGGGYLLQHTINRITLPSGL YPLLALSGGILIFAVTTALDGSGILAVYLCGFLLGNRPIRNRYAILQNFDGLAWLAQIAM FLVLGLLVTPSDLLPIAVPALLLSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLR GAVPIILAVFPMMAGLDNARLFFNVAFFVVLVSLLFQGTSLGWAAKKAKVVVPPVGWPVS RVGLDIHPENPWEQFVYQLSADKWCVGASLRDLHMPAETRIAALFRDNALLHPTGSTRLR ENDILCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASARFADVALIYGLEGGLEN RDNQQTLGEIIQQLLGAAPVVGDQVEFAGMIWTVAEKEDNAVRKVGVRPMEEEAE >gi|333596725|gb|GL892087.1| GENE 457 518389 - 519459 1322 356 aa, chain - ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 609 83.0 1e-174 MSRPILAQLDLQALKDNLQIVRRAAPGSRVWSVVKANAYGHGIDRIWSALGATDGFALLN LEEAILLRERGWKGPILLLEGFFHAQDLPLLDKYRLTTSVHSNWQIKAIQDAKLHAPLDI YLKVNSGMNRLGFQPERVHTVWQQLRALKNVGEMTLMAHFADAEKPDGIADAMVRIEQAA EGLDCPRSLSNSAATLWHPEAHYNWVRPGIILYGASPSGQWQDIANSGLKPVMTLRSEII GVQTLKAGDTVGYGSRYRAAGEQRIGIVAGGYADGYPRIAPSGTPVWVDGVRTGTVGTVS MDMLAIDLTPCPQAGIGSPVELWGNEVKIDDVATAAGTVGYELMCALAPRVPVVTV >gi|333596725|gb|GL892087.1| GENE 458 519469 - 520767 1399 432 aa, chain - ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 812 89.0 0 MRVVILGSGVVGVTSAWYLSQAGHEVTVIDRESGPALETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAISLDGTQFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK ALRASTGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDAGVPYQLLEASQLAQVEPALA EVAHKLTGGLRLPNDETGDCQLFTQRLARMCEQAGVKFRFNTSVDKLLSEGEKIYGVKCG EEVIKADAYVMAFGSYSTAMLKGILDIPVYPLKGYSLTIPVKEDNGAPVSTILDETYKIA ITRFDNRIRVGGMAEIVGFNTELLKPRRETLEMVVGDLFPRGGFIEQATFWTGLRPMTPD GTPIVGRTPYKNLWTNTGHGTLGWTMACGSGQLLSDLISGRTPAIPFDDLSAARYQSGFT PSRPQHLHGAHN >gi|333596725|gb|GL892087.1| GENE 459 521089 - 522621 2139 510 aa, chain + ## HITS:1 COG:ECs1683 KEGG:ns NR:ns ## COG: ECs1683 COG2719 # Protein_GI_number: 15830937 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 510 1 510 510 1007 96.0 0 MATLDSMSRDSTRLSDGPDWTFELLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITDCEERYGVDEVEKLLDSCHALM NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE GKVTERFMMEFLHSHTNVVFQPAYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF PDIAGSDWLETLHFAMRDFKDESFISQFMSPKIMRDFRFFTVLDDDRNNYLEISAIHNEE GYREIRSRLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHR LWGFDVLLEQQNEDGSVELLERCPARMNTL >gi|333596725|gb|GL892087.1| GENE 460 522694 - 523413 815 239 aa, chain - ## HITS:1 COG:ECs1682 KEGG:ns NR:ns ## COG: ECs1682 COG2186 # Protein_GI_number: 15830936 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 464 92.0 1e-131 MVIKAQSPAGFAEEYIIESIWNNRFPAGSILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNIATIFIRTAFRQH PEDALKVLATANEVEDHANAFATLDYNVFRGLAFASGNPVYGLILNGMKGLYTRIGRHYF ANPEARSLALGFYHKLSKLCTEGLHDQVYETVRRYGHDSGEIWHRMQKTLPGDLAIQGR >gi|333596725|gb|GL892087.1| GENE 461 523785 - 525155 1508 456 aa, chain + ## HITS:1 COG:STM1806 KEGG:ns NR:ns ## COG: STM1806 COG3067 # Protein_GI_number: 16765147 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 454 57 511 514 673 82.0 0 MALKCYPLLPGGLLALEAVIVGMTSAEHVKNEIASNLEVLLLLIFMVAGIYFMKQLLLFI FTRLLLSIPSKSLLSLAFCLAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRPGEN LQDDSHVEAHNRDVLEQFRAFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAEWHFGE FFLRMAPVSVPVLICGLATCVLVEKFNLFGYGAKLPDPVRKELQKFDEQSRKQRTRQETL RLIAQGIIGVWLIAALAFHLAEVGLIGLSVIILATSLSGVTDEHAIGKAFTEALPFTALL AVFFAVVAVIIDQHLFAPIIAFVLQAAPDSQLTLFYLFNGLLSSISDNVFVGTVYINEAK AAMEQGIVSTGQFELLAVAINTGTNLPSVATPNGQAAFLFMLTSALAPLIRLSYGRMVWM ALPYTVVLTLVGLLCIKITLVPCTQWLLQAGILAAH >gi|333596725|gb|GL892087.1| GENE 462 525202 - 525732 599 176 aa, chain + ## HITS:1 COG:STM1807 KEGG:ns NR:ns ## COG: STM1807 COG1495 # Protein_GI_number: 16765148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 1 176 1 176 176 286 84.0 1e-77 MLRFLNQCSRGRGAWLLMALTAFALEMVALWFQHVMGLKPCVLCIYERCALFGIMGAGLV GAIAPKTPLRYAAIAIWLYSAWKGIALAWEHTQMQLHPSPFMTCDFAARFPSWLPLDKWL PQVFVASGDCSVRQWEFLTLEMPQWLVGIFVAYFVVALLVLIAQPFKPKKRDLFGR >gi|333596725|gb|GL892087.1| GENE 463 525882 - 526322 613 146 aa, chain - ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 145 11 155 158 275 90.0 2e-74 MNDIPFWQSKTLDDMTDAEWESLCDGCGQCCLHKLMDEDSDEIYFTNVACKQLNIKTCQC RNYERRFEYEPDCIKLTRENLPTFEWLPHTCAYRLLAEGKDLPTWHPLLTGSKAAMHGER ISVRHIAVKESEVRDWEDHIMNHPNR >gi|333596725|gb|GL892087.1| GENE 464 526416 - 527075 941 219 aa, chain - ## HITS:1 COG:ycgM KEGG:ns NR:ns ## COG: ycgM COG0179 # Protein_GI_number: 16129143 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Escherichia coli K12 # 1 219 1 219 219 400 87.0 1e-111 MYQHHNWQGALLDYPVSKVVCVGSNYAKHIQEMGSAVPEEPVLFIKPETALCDIRQPLVL PQGLGSVHHEVELAVLIGATLRQATEEHVEKAIAGYGVALDLTLRDVQGKMKKAGQPWEK AKGFDNSCPISGFVPVGEFTDDPQNTPLSLKVNGEIRQQGTTADMIHKIVPLIAYMSRFF TLKPGDVILTGTPEGVGPLHSGDELDVSFNGLSLKTRVL >gi|333596725|gb|GL892087.1| GENE 465 527123 - 527398 390 91 aa, chain - ## HITS:1 COG:ECs1674 KEGG:ns NR:ns ## COG: ECs1674 COG3100 # Protein_GI_number: 15830928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 91 12 102 108 149 87.0 9e-37 MFCVIYRSTSRDQTYLYVEKKDDFSRVPEELMKSFGRPQLAMLLPLDGRKKLVNADLEKV KKALTEQGYYLQLPPPPENLLKQHLEVSGKK >gi|333596725|gb|GL892087.1| GENE 466 527522 - 528229 320 235 aa, chain + ## HITS:1 COG:STM1814 KEGG:ns NR:ns ## COG: STM1814 COG0850 # Protein_GI_number: 16765155 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Salmonella typhimurium LT2 # 1 235 1 235 235 380 83.0 1e-106 MSNTPIELKGSSFTLSVVHLHDAKPEVIRQALEDKIAQAPAFLKHAPVVVNVSDLEGPVN WKRLQQAVAATGLRIVGISGCKDAELKAEIERAGLPLLNEGKEKAPRATPATVPAPPPPA QTVTPVTKTRLIDLPVRSGQRIYAPNCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAG ASGDREAQIFCTHLTAELVSIAGEYWLSDKIPAEFYGKAARLQLADNALTVQPLN >gi|333596725|gb|GL892087.1| GENE 467 528252 - 529064 1145 270 aa, chain + ## HITS:1 COG:STM1815 KEGG:ns NR:ns ## COG: STM1815 COG2894 # Protein_GI_number: 16765156 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Salmonella typhimurium LT2 # 1 270 1 270 270 492 96.0 1e-139 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVEKVLDDLKKMEFDFVVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGQEPIKEHLLL TRYNPGRVNKGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDTQADAGKAYA DTVDRLLGEERPFRFIEEEKKGFLKRLFGG >gi|333596725|gb|GL892087.1| GENE 468 529068 - 529334 407 88 aa, chain + ## HITS:1 COG:STM1816 KEGG:ns NR:ns ## COG: STM1816 COG0851 # Protein_GI_number: 16765157 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 147 98.0 5e-36 MALLDFFLSRKKSTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEM VTVQLEQKDGDISILELNVTLPEAEESR >gi|333596725|gb|GL892087.1| GENE 469 529424 - 530578 1583 384 aa, chain - ## HITS:1 COG:ECs2513 KEGG:ns NR:ns ## COG: ECs2513 COG0349 # Protein_GI_number: 15831767 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Escherichia coli O157:H7 # 10 384 1 375 375 619 81.0 1e-177 MGANKRESDLNYQMITTNDELASLCEVTRDFPAIALDTEFVRTRTYYPQLGLIQMYDGKH VSLIDPLDITDWAPMRELLLDTAVTKYLHAGSEDLEVFLNTFGIMPQPLIDTQILAAFSG RPLSWGFAAMVEEYTGLTLDKSESRTDWLARPLTARQLDYAAADVFYLLPIAGQLMKEAE ASGWLSAALDECRMTQQRRQEVVDPKEAWRDITNAWQLRTRQLACLQLLADWRLRKARER DLAVNFVVREEHLWAVARYMPGSLGELDSIGLSGSEIRFHGKTLLALVEKAQQLPEEALP EPLLNLMDMPGYRKAFKDIKALVQTVAGESKLSAELLASRRQINQLLNWHWKLKPQNGLP ELVAGWRGELMAERLNTLLEGYPR >gi|333596725|gb|GL892087.1| GENE 470 530623 - 532341 1912 572 aa, chain - ## HITS:1 COG:ECs2514 KEGG:ns NR:ns ## COG: ECs2514 COG0318 # Protein_GI_number: 15831768 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 12 572 1 561 561 1092 93.0 0 MTTNTHFRGDALKKVWLNRYPADVPAEINPDRYQSLIELFEHSVRRYADQPAFVNMGEVM TFRKLEERSRAFAAYLQEGLGLQKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYT PRELEHQLNDSGAAAIVIVSNFAHTLEKVVDRTQVKHVILTRMGDQLSTAKGTLVNFVVK YVKRLVPKYHLPDAISFRRALHAGYRMQYVKPEIVSEDLAFLQYTGGTTGVAKGAMLTHR NMLANLEQVNATYGPLLHPGKELVITALPLYHIFALTMNCLLFIELGGQNVLITNPRDIP GLVKELAKYPFTAMTGVNTLFNALLNNKEFQQLDFSTLHLSAGGGMPVQQAVAERWVKLT GQYLLEGYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDEDNEVPHGEPGELCV RGPQVMLGYWQRPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNE IEDVVMQHSGVLEVAAVGVPSGSSGEAVKIFVVKKDPSLTEDALITFCRRQLTGYKVPKL VEFRDELPKSNVGKILRRELRDEARAKVDNKA >gi|333596725|gb|GL892087.1| GENE 471 532512 - 533093 624 193 aa, chain - ## HITS:1 COG:STM1819 KEGG:ns NR:ns ## COG: STM1819 COG3065 # Protein_GI_number: 16765160 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 305 80.0 5e-83 MAVQSKVVRFLMAGAVAIALSGCVTVPDAIKGTSPTPQQDLVRVMNAPELYVGQEARFGG KVVDVVNQQGKTRLEIATVPLDSGARPVLGEASRGRIYADVSGFLDPVDFRGQLVTVVGP ITGLEAGKIGNTPYKFMTMQVNGYKRWRITQQVVMPPQPIDPWMWGPHPYRYGYGGWGWY NPGPAQVQTIVTE >gi|333596725|gb|GL892087.1| GENE 472 533131 - 533826 860 231 aa, chain - ## HITS:1 COG:yeaZ KEGG:ns NR:ns ## COG: yeaZ COG1214 # Protein_GI_number: 16129761 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Escherichia coli K12 # 1 231 1 231 231 374 82.0 1e-104 MRILAIDTATEACSVALWNDGTIFAHFEECPREHTQRILPLVKTILTEGNTALTDLDALA YGRGPGSFTGVRIGIGIAQGLALGADLPMIGVSTLATMAQGAWRMTGATRVLAAIDARMG EVYWAEYTRDENGVWHGEETEAVLKPEAVTERLKQLSGEWATVGTGWAAWPEMASGTGVT LVDGNMLLPAAEDMLPIACQLLDVGKTVAVEHAEPVYLRNTVAWKKLPGRE >gi|333596725|gb|GL892087.1| GENE 473 533893 - 535803 2081 636 aa, chain - ## HITS:1 COG:ECs2517 KEGG:ns NR:ns ## COG: ECs2517 COG1199 # Protein_GI_number: 15831771 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 635 1 635 636 1172 91.0 0 MADDFSPEGQLAQAIPGFKPREPQRQMAHAVAHAIDKAQPLVVEAGTGTGKTYAYLAPAL RAKKKVIISTGSKALQDQLYSRDLPTVAKALKYKGRLALLKGRSNYLCLERLEQQALAGG DLPVQTLSDVIVLRAWANQTEEGDISTCASVPEDSPAWPLVTSTNDNCLGSDCPLYKDCF VVKARKKAMDADVVVVNHHLFLADMVVKDSGFGELIPEAEVMIFDEAHQLPDIASQYFGQ SLSSRQLQDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA DNNIQRALLLLDDALELCYDVAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGYSYW YECTSRHFTLALTPLTVADKFKEVMAQKPGTWVFTSATLSVNDDLHHFTERLGIDQAESL LLPSPFDYEKQALLCVPRNLPLPNQPGAARHLAAMLKPMIEANNGRCFMLCTSHAMMRDL AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKL PFTSPDDPLLKARMEDCRLRGGDPFDDVQLPDAVITLKQGVGRLIRDVTDRGVLVICDNR LVMRPYGATFLASLPPAPRTRDIKRAVRFLANPTAE >gi|333596725|gb|GL892087.1| GENE 474 535937 - 536281 441 114 aa, chain + ## HITS:1 COG:yoaB KEGG:ns NR:ns ## COG: yoaB COG0251 # Protein_GI_number: 16129763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 114 17 130 130 191 90.0 4e-49 MTITRIDAEARWSDVVIHNQTLYYTGVPANLDADAFEQTANTLAQIDAVLEKQGSDKSRI LDATIFLANKDDFAAMNKAWDAWVVAGHAPVRCTVQATLMKPEYKVEIKIIAAV >gi|333596725|gb|GL892087.1| GENE 475 536287 - 536469 221 60 aa, chain - ## HITS:1 COG:STM1823 KEGG:ns NR:ns ## COG: STM1823 COG3140 # Protein_GI_number: 16765164 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 59 1 59 59 75 91.0 2e-14 MFAGLPSLSHDQQQKAVERIQELMSQGMSSGQAISQVAEELRATHTGERIVARFEDEDEE >gi|333596725|gb|GL892087.1| GENE 476 536522 - 537865 1309 447 aa, chain + ## HITS:1 COG:ECs2521 KEGG:ns NR:ns ## COG: ECs2521 COG0147 # Protein_GI_number: 15831775 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 4 444 1 452 453 673 73.0 0 MPYMNMRFPTVMTLPWRADAAEFWFARLSHLPFAMLLHSGHADHPYSRFDILVADPVKTL KTDDLSPTDDPLMQLQNEIHALGLSATPDPDLPFQGGALGLFGYDLGRRFEKLPEHAQAD IPLPDMAVGLYDWALIVDHQKKTVSLLSHHDVQARLAWLEAQRPAAPEHFMLTSGWRSNM TAPEYAEKFSRVQAYLHSGDCYQVNLAQRFQATYQGDEWQAFTRLNASNKAPFSAFVRLE HGAILSLSPERFIHLADGIIQTRPIKGTLPRLADADADRQQAEKLAVSPKDRAENLMIVD LMRNDIGRVAEPGSVRVPELFVVEPFPAVHHLVSTITARLPSSRTACDLLRAAFPGGSIT GAPKVRAMEIIDELEPHRRNAWCGSIGYISLCGTMDTSITIRTLTACDGSLYCSAGGGIV ADSQAEAEYQETFDKVNRILKQLENSR >gi|333596725|gb|GL892087.1| GENE 477 537862 - 538440 529 192 aa, chain + ## HITS:1 COG:STM1825 KEGG:ns NR:ns ## COG: STM1825 COG0494 # Protein_GI_number: 16765166 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 192 1 192 192 308 83.0 4e-84 MKKDNLTLDDFLSRFQLLRPQVNRATLNQRQAAVLIPVVRREQPGLLLTQRSPHMRKHAG QVAFPGGAVDSTDASLIAAALREAHEEVAIPPASVEVIGVLPPVDSVTGFQVTPVVGIIP PDLQYHASVDEVSAVFEMPLEEALRLGRYHPLDIHRRGHDHRVWLSWYQHYFVWGMTAGI IRELALQIGLKP >gi|333596725|gb|GL892087.1| GENE 478 538643 - 539989 1692 448 aa, chain + ## HITS:1 COG:STM1826 KEGG:ns NR:ns ## COG: STM1826 COG1760 # Protein_GI_number: 16765167 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Salmonella typhimurium LT2 # 1 448 7 454 454 835 90.0 0 MFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLESVTRVAVDVYGSLSLTGKGHHTDIAI IMGLAGNMPDTVDIDAIPAFIRDVETRGRLLLANGQHEVDFPQDDGMRFRSDNLPLHENG MTIHAWNGEKEIYSKTYYSIGGGFIVDEEHFGKESAGDVNVPYPFKSATEMLGYCKETGL SLSGMVMKNELALHSKKEIEDYFANVWQTMRACIDRGMNTEGVLPGPLRVPRRASALRRM LVTTDKFSNDPMNVVDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYYDHFIEP VTPDIYIRYFLAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGASPEQVC VAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINASRMAMRRTSEPRVSLDKVIE TMYETGKDMNAKYRETSRGGLAIKVQCD >gi|333596725|gb|GL892087.1| GENE 479 540119 - 541717 1099 532 aa, chain + ## HITS:1 COG:yoaD_2 KEGG:ns NR:ns ## COG: yoaD_2 COG2200 # Protein_GI_number: 16129769 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 532 1 272 272 469 80.0 1e-132 MQTAQTIIKDYRRKRVIVCVTVALVTLVLTLGIRFISQRNINQDRIHDFTLHTVRALDKV LLSLEAQREMLLSLVGIPCSEANLILRKQAAILQTVRSIALVKDGILYCSSVYGSRNVPV SEFVPLLPVSESRLLLLTDRWLVKGSPVLIQWSPLPSDGNDGVMEVVNIDLITKMILEPQ RPQITDVVLKVGDKFLRDGQQVTNTPTINENASLLEQSSQHYPFSVTVSGPGPGEMALKT LPTQLPLALILSLLMGYIAWLATARRMSFTWEINLGIAAREFELFCQPLVNARTRECVGV EILLRWNNPRQGWISPDVFIPLAEEHNLIVPLTRYVISETVRQIGYFPASRDFHIGINVA ASHFRRAVLIRDLNRIWFNANPVQQLIVELTERDALLDVDYRIVRELHRKGVKLAIDDFG TGNSSLSWLEKLHPDVLKIDKSFTTAIGTDAVNSTVTDIIIALGQRLNIELVAEGVETEE QSRYLRRHSVHILQGYLYARPMPLREFPKWLAESHSPPARHNGHIVPLLPLR >gi|333596725|gb|GL892087.1| GENE 480 541724 - 543283 2094 519 aa, chain - ## HITS:1 COG:yoaE_2 KEGG:ns NR:ns ## COG: yoaE_2 COG1253 # Protein_GI_number: 16129770 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 231 519 1 288 288 456 82.0 1e-128 MEFLMDPSIWVGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLIGLSLALIMRLG LLSVISWMVTLTKPLFTVMDFTFSGRDLIMLVGGLFLLFKATTELHERLENRQHDDGHGK GYASFWVVVLQIVVLDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVN QHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSILIELFNQIARRNFIKQQS NQPLRARTADAILRLMGGRRQVNVQADNENRNPVPVPEGAFVEEERYMINGVLSLASRSL RGIMTPRGEISWVDANLSVDEIRQQLLSSPHSLFPVCRGELDEIIGVVRAKEMLVALEEG VNVEAVAAASPAIVVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAG EFPDADETPEIVADGDGWLVKGTTDLHALSHTLGVENVVNDDEDIATVAGLVIAVNGQIP RIGDVLELPPLQITIVEANDYRVDMVRIVKEHSAHDEEE >gi|333596725|gb|GL892087.1| GENE 481 543746 - 544708 1034 320 aa, chain + ## HITS:1 COG:ECs2527_2 KEGG:ns NR:ns ## COG: ECs2527_2 COG3444 # Protein_GI_number: 15831781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 155 320 1 166 166 295 93.0 7e-80 MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYTAQLEKLDTSK GVLFLVDTWGGSPFNAASRIVVDKEHYEVVAGVNIPMLVETFMARDDNPAFDELVALAVE TGREGVKALKAQPVEKPAPVAAAPKAAAPAKPMGPNDYMVIGLARIDDRLIHGQVATRWT KETNVQRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLL FTNPTDVERIVEGGVKITSVNIGGMAFRQGKTQVNNAISVDAKDIEAFNKLNARGIELEA RKVSTDQKLKMMDLIGKVGK >gi|333596725|gb|GL892087.1| GENE 482 544756 - 545556 1010 266 aa, chain + ## HITS:1 COG:ECs2528 KEGG:ns NR:ns ## COG: ECs2528 COG3715 # Protein_GI_number: 15831782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 379 94.0 1e-105 MEITTLQIVLVFIVACIAGMESVLDEFQFHRPLVACTLIGAVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTVLVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAF QHAADKAAENGNLTALSWIHVSSLFLQAMRIAIPAVIVAISVGTSEVQGMLNAIPEVVTS GLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGAVMAILYIQ LSPKYNRVAGAPAQAAGNNDLDNELD >gi|333596725|gb|GL892087.1| GENE 483 545569 - 546420 1206 283 aa, chain + ## HITS:1 COG:STM1832 KEGG:ns NR:ns ## COG: STM1832 COG3716 # Protein_GI_number: 16765173 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 1 282 4 285 286 516 96.0 1e-146 MVDMTKTTTEKKLTPGDIRGVFIRSNLFQGSWNFERMQALGFCFSMVPAIKRLYPENNEA RRQAIKRHLEFFNTHPYVAAPVLGVTLAMEEQRANGAEIDDGAINGIKVGLMGPLAGVGD PIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNAVRLLTRYYGVAYGYRKGVDIVKDM GGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSTITGQDGQTRVTTVQTILDQLMP GLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYAVGLLGL >gi|333596725|gb|GL892087.1| GENE 484 546475 - 546933 301 152 aa, chain + ## HITS:1 COG:STM1833 KEGG:ns NR:ns ## COG: STM1833 COG4811 # Protein_GI_number: 16765174 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 152 1 152 156 225 80.0 3e-59 MTVTDTVLVLFIVALLAYAIYDEFIMPRRHGETLLTLPLLRRGRVDAFIFAGLVVILIYN NVTSHGAILTTWLLCALALMAIYLFWIRAPKLIFKKHGFFFANVWIEYNRIKEMNLSEDG VLVMQLEQRRLLIRVKNIDDLEKIYKLLLKTQ >gi|333596725|gb|GL892087.1| GENE 485 547306 - 547899 712 197 aa, chain + ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 4 197 13 206 206 302 87.0 3e-82 MDIPGLDALMNISATILLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAIETLTP LIGWGLGMLASQFVLEWNHWIAFVLLVFLGGRMVIEGFRGNSDEDDAPLQRHGFWLLVTT AIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGPLLGKRAEILGG IVLIGIGAQILWAHFAG >gi|333596725|gb|GL892087.1| GENE 486 547896 - 548711 605 271 aa, chain - ## HITS:1 COG:rrmA KEGG:ns NR:ns ## COG: rrmA COG0500 # Protein_GI_number: 16129776 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 269 1 267 269 437 78.0 1e-122 MSFSCPLCHAPLTRAEKTFICPQGHQFDRAKEGYVNLLPVQHKRSRDPGDSAEMMQARRA FLDAGHYQPLRDAVVALLRGSLTEGASAMLDIGCGEGYYTATFADVAAEKGAETYGLDVS KVAIRAAAKRYSAVTFCVASSHRLPFEEASMDAVVRIYAPCKAEELARVVKPGGWVITVT PGPRHLLELKGLIYDEVHLHAPHSEQLAGFALKQAQSVAYDMTLQGSEAVALLQMTPFAW RAKPEVWETLAAQTEFCCQTDFSIHCWQREG >gi|333596725|gb|GL892087.1| GENE 487 548751 - 550343 1288 530 aa, chain - ## HITS:1 COG:STM1836 KEGG:ns NR:ns ## COG: STM1836 COG0768 # Protein_GI_number: 16765177 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 1 529 52 580 581 924 84.0 0 MRSLREVAIDAPRGMIVDREGRPLAVSVPVQAVWADPKTVLEKGGVGFDSRWQALANALH LSLSTLASRINSNPHGRFIYLARQVDPSQAKWIDKLRLPGINLRDESRRFYPAGHVAANL IGFTNIDGQGIEGVEKSFNTQLTGKAGVRLVRKDRYGHVVENLTEVAPVPAHNIQLSIDE RLQTITEDALDNAVAWNKAESGASVLINIQTGEILAMASFPDFNPNNREGATLDDFRNRA ISDTFEPGSTVKPLVLMTALQQGLVQPDSVIDTHPYTIDGHRIRDVGYYPELTMTGILQK SSDTGVSRLSLAMPVQRLLDTYKNFGFGESTGLGLTGESAGLLPQRKFWSQLDRATFAFG YGLMVTPLQLAHVYATIGSYGIERPLSITRIDPPVIGKRVMSEEIVHEVEHMMESVALPG GGGIKAAVRNYRVAIKTGTAKKIDEHGQYVDKYVAYTAGVAPASDPRFALVVVINDPQNG AYYGGAVSAPVFSEIMGNVLRLENVKPDGLPADSDHLIVMRHPAVYNPGE >gi|333596725|gb|GL892087.1| GENE 488 550713 - 550922 242 69 aa, chain - ## HITS:1 COG:ECs2533 KEGG:ns NR:ns ## COG: ECs2533 COG1278 # Protein_GI_number: 15831787 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 100.0 5e-28 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG PAAVNVTAI >gi|333596725|gb|GL892087.1| GENE 489 551748 - 552032 357 94 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2394 NR:ns ## KEGG: Ent638_2394 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 94 1 96 96 126 79.0 2e-28 MGELLNSGLLSIASLVMSLVVLVVGLVLWFFVNRASSRTNEQVELLEALLDQQKRQNALL RRLCEANEPEAKEVAKDAVAQQDEEDFIRLVAER >gi|333596725|gb|GL892087.1| GENE 490 552411 - 552650 212 79 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2396 NR:ns ## KEGG: Ent638_2396 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 79 1 79 79 123 84.0 2e-27 MRLLIRTVIVLAIVWIGLLLSGYGVLMGSKENAAGLGIQCKYLTAQGVSTAQYIHSDSGV IGLTNCPVLRKSSVVVDNG >gi|333596725|gb|GL892087.1| GENE 491 552713 - 553504 938 263 aa, chain - ## HITS:1 COG:STM1842 KEGG:ns NR:ns ## COG: STM1842 COG1414 # Protein_GI_number: 16765183 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 263 1 263 263 470 94.0 1e-132 MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGY VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMRELSRLTKETIHLGALDEDSIVY IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDREEVKQILDGVEYKRSTDRTITST DELLSVLDQVREQGYGEDNEEQEEGLRCIGVPVFDRFGVVIAGLSISFPTLRFSEERLHE YVAILHTAARKISEQMGYNDYPF >gi|333596725|gb|GL892087.1| GENE 492 553683 - 555056 1247 457 aa, chain + ## HITS:1 COG:yebQ KEGG:ns NR:ns ## COG: yebQ COG0477 # Protein_GI_number: 16129782 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 457 38 494 494 647 81.0 0 MQKNVSDGLPLPQRYGAIATIVIGISMAVLDGAIANVALPTIAKDLNASPASSIWIVNAY QIAIVISLLSLSFLGDMFGYRRVYQCGLVVFTLTSLFCALSDSLHTLTLARIAQGFGGAA LMSVNTALIRLIYPHRHLGRGMGINSFIVAVSSAAGPTIAAAILSVASWQLLFAINVPLG VVAIFFALRYLPENGPKSAMPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIAAEIVA MLTIGFFFVWRQLALPVPLLPVDLLRIPLFSLSICTSICSFCAQMLALVALPFFLQSVLG RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGAIGLVVMAVGLFALALLPSSPGD LDIIWRMILCGAGFGLFQSPNNHTIITSAPRHRSGGASGMLGTARLLGQSTGAAMVALMF NLAGQNATHVALVTAGTLATLAAIISGLRVTQPKAQA >gi|333596725|gb|GL892087.1| GENE 493 555108 - 555989 1107 293 aa, chain - ## HITS:1 COG:ECs2539 KEGG:ns NR:ns ## COG: ECs2539 COG0501 # Protein_GI_number: 15831793 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 520 93.0 1e-147 MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLLIMALLFGFGGSFISLLMSKWMALK SVGGEVIEQPRNDMEQWLMSTVAQQSKQAGIAMPQVAIYHAPDINAFATGARRDASLVAV STGLLQNMSRDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQIAAGFMGG NRDEGEESNGNPLIYFAVSMVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIA ALQRLKTSYEPQEANSMMAFCINGKSKSLSELFMSHPPLDKRIEALRSGEYLK >gi|333596725|gb|GL892087.1| GENE 494 556183 - 558231 2181 682 aa, chain - ## HITS:1 COG:prc KEGG:ns NR:ns ## COG: prc COG0793 # Protein_GI_number: 16129784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Escherichia coli K12 # 1 682 1 682 682 1233 91.0 0 MNTFFKLTALAGLFAITGHAFAVDDITRVDQIPVLKEETQHATVSERVTSRFTRSHYRQF DLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKRKSDVGDELRSGKLDLFYDLYNLSQ KRRFERYQYALKVLERPMDFTGNDTFNLDRSKSPWPKDEAELNALWDGKVKYDELSLKLT GKDEKEIRETLNRRYKFAIRRLAQTNSEDVFSLAMTAFAHEIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTVINSMVAGGPASKSKAISVGDRIVGVGQTGKSMVDVIGWRL DDVVALIKGPKGSKVRLEILPAGKGTKTRIVTLTRERIRLEDRAVKMSVKTVGKEKVGVL DIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPSGPVVQVR DNNGKVREDADTDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPTGTEETETG EKFEDNALPWDSIDAATFVKSGDMKQFGPELLKNHNDRIGKDPEFQYIMKDIARFNALKA KRNIVSLNYAQREKENNEDDATRLARINDRFKREGKPLLKKLDDLPKDYQEPDPYLDETV HIALDLAKLEKEKPAVQPAPAK >gi|333596725|gb|GL892087.1| GENE 495 558251 - 558937 604 228 aa, chain - ## HITS:1 COG:proQm KEGG:ns NR:ns ## COG: proQm COG3109 # Protein_GI_number: 16132234 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Escherichia coli K12 # 1 228 1 232 232 328 86.0 7e-90 MENQPKLNSSKEVIAFLAERFPQCFSAEGEARPLKVGIFQDLVARVEGEMNLSKTQLRSA LRLYTSSWRYLYGIKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK KREAAAANGQEDAPRRERKPRPAPRRAENNDRKPRADKPAAKAPRAPREEPRHTPVSDIN ALSVGQSLKVKAGNNAMDATVLEITKDGVRVQLTSGMSMIVRAEHLLF >gi|333596725|gb|GL892087.1| GENE 496 559034 - 559531 304 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 3 147 6 150 165 121 42 1e-25 MNKTEFYADLNRDFKALMAGETSFLATLANTSALLFERLSDVNWAGFYLLEGDTLVLGPF QGKLACVRIPVGRGVCGTAVATRQVQRVEDVHAFDGHIACDASSNSEIVLPLVVKNQIIG VLDIDSTVFSRFTAEDEQGLRALAANLENVLAETDYHKFFASVAG >gi|333596725|gb|GL892087.1| GENE 497 559877 - 560947 928 356 aa, chain + ## HITS:1 COG:STM1848 KEGG:ns NR:ns ## COG: STM1848 COG2995 # Protein_GI_number: 16765189 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Salmonella typhimurium LT2 # 1 356 72 427 427 603 86.0 1e-172 MAVTMLLLMPFAWTEPLLKLYLLGVRIDANVLQGIWQMTREGDPLTAAMVLFCVVGAPLV LVAAIAYLWFGNILGMNLRPVLLMLEKLKEWVMLDIYLVGVGVASIKVQDYAFLQPGIGL FAFISLVLLSILTLIHLNVEQLWERFYPQRPATRPDENLRVCLGCHYTGFPDKRGRCPRC HIPLRLRRNNSLQKCWAALIASLVFLFPANMLPISVIYVNGARQEDTILSGIISLAHSNV GVAAIVFIASILVPFTKVVVMFTLLISIHFKCEQGLRTRILLLRFVTWIGRWSMLDLFVI SLMMSLINRDQLLAFTMGPAAFYFGSAVILTILAVEWLDSRLLWDAHESGNARFAD >gi|333596725|gb|GL892087.1| GENE 498 560916 - 563549 3006 877 aa, chain + ## HITS:1 COG:ECs2544 KEGG:ns NR:ns ## COG: ECs2544 COG3008 # Protein_GI_number: 15831798 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli O157:H7 # 1 877 3 879 879 1500 85.0 0 MSQETPASPTEARIKTKRRISPFWLLPVIALMIAGWLIWTTYEDRGSTITIDFQSADGIV AGRTPVRFQGVEVGTVQDISLGKGLNKIQVRASIKSDMQDALRAETQFWLVTPKASLAGV SGLDALVGGNYIGMMPGKGEPQDHFVALDTQPKYRLNNGDLMIHLRAPDLGSLNSGSLVY FRKIPVGRVYDYAINPNKDGVTIDVLIERRFTSLVKKGSRFWNVSGVDADLSLSGAKVKL ESLAALVNGAIAFDSPADSSPAEAEDTFGLYADLAHSQRGVIVKLTLPDAKGLKAGSTPL MYQGLEVGQLTKLTLNAGGSVTGEMTVDPSVVDLLREKTRIELRNPKLSLSDVSISSLLT GSTFELIPGEGAPNKNFVIAPADKALLQKPGVLTVTLNAPESYGIEAGQPLILHGVQVGQ VLERKLSEKGVSFSAAIDPQYSNLVHGDSKFVVNSRVDVKVGLDGVEFLGASASEWVNGG IRILPGSKGALRESYPLFANLDKAIENSLGDLPTTTLTLSAETLPDVQAGSVVLYRKFEV GEVITVRPRADAFDIELHIKPEYRKLLTPNSVFWAEGGAKVQLNGNGLTVQASPLSRALR GAISFDNLSGAGGNMRKGDKRILFPSETAARAVGGQITLHTFDAGKLAEGMPIRYLGIDI GQVQKLTLITARNEVQATAVLYPEYVQTFARAGSRFSVVTPQISAAGVEHLDTILQPYIN VEPGRGNARREFELQEATITDSRYLDGLSIVVEVPEAGSLGIGTPVLFRGIEVGTVTSLT LGNLSDRVMVGLRISQRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAF ATPPGTPLAPKAQAGKHFLLLESEPKEWREWGTALPR >gi|333596725|gb|GL892087.1| GENE 499 563672 - 565069 1392 465 aa, chain + ## HITS:1 COG:yebU_1 KEGG:ns NR:ns ## COG: yebU_1 COG0144 # Protein_GI_number: 16129788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 368 18 385 385 644 83.0 0 MREALPAHLSFDDFVAACQRPLRRSIRVNTLKISVGAFLDLVSPYGWQLTPVPWCEEGFW IERDDEESLPLGSTAEHLSGLFYIQEASSMLPVAALFADDNQPERVMDVAAAPGSKTTQI AARMNNRGAILANEFSASRVKVLHANISRCGIHNVALTHFDGRVFGAALPEAFDAILLDA PCSGEGVVRKDPDALKNWSVASNLEIAATQRELIDSAFHALRPGGTLVYSTCTLNRDENE DVCLWLKQRYADAVEFLPLDTLFDSASHAATPEGFLHVFPQIYDCEGFFVARLRKTRAVD PLPAPAFKVGNFPFAPVKGREAAQVQAAASKVGLHWDESLRLWMRDKELWLFPTTIEPLI GKVRFSRLGIRLAEIHNKGYRWQHEAVIALAGDENTFALTHQEAEEWYRGRDVYPENSPA QDEVIVTYQGFPLGLAKKVGSRLKNSYPRELVRDGRLFTGNNRTA >gi|333596725|gb|GL892087.1| GENE 500 565175 - 565414 256 79 aa, chain + ## HITS:1 COG:no KEGG:ECL_01465 NR:ns ## KEGG: ECL_01465 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 79 1 79 79 148 97.0 6e-35 MTKTSVRIGAFEIDDAELRGEAQGERTLSIPCKSDPDLCMQLDAWDADTSVPAILDGEHS VLYREHYDSKTDAWVLRLA >gi|333596725|gb|GL892087.1| GENE 501 565449 - 566093 674 214 aa, chain - ## HITS:1 COG:STM1853 KEGG:ns NR:ns ## COG: STM1853 COG0639 # Protein_GI_number: 16765194 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Salmonella typhimurium LT2 # 1 214 7 216 216 266 57.0 3e-71 MYQKIEGDHWRHVWVVSDIHGCYQWLMDELKKRHFNPDRDLLISVGDIIDRGPDSVKCLE LMQEKWFYAVRGNHEQMALDALENNDFSLWSINGGMWFTGLNAAKQKQAKGLLDACRALP HIIEITCKNGLNVVAHADYPSAEYAWHKPVDARRVLWDRDRLMGFMVGKGQGISGADHFW FGHTPVDKRYDFNNLHYIDTGAVFGGFLTLVQLQ >gi|333596725|gb|GL892087.1| GENE 502 566261 - 567241 675 326 aa, chain + ## HITS:1 COG:STM0940 KEGG:ns NR:ns ## COG: STM0940 COG2990 # Protein_GI_number: 16764302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 22 311 30 318 322 218 41.0 2e-56 MSNIHLQNDVYYPHRTNIISELVSGKRVPGPIWHKRDYRLKFLLRSLLFWSSTHRMLEAL SGRDDFDRLLASQITLPSKTHRQYLMRGLTSHDRADAIVSHYHWIDSLKNTALAHALTSP QALPVIRFEAKNGEIYTVHASSAGKAEREGESTLWLHDNDNTLLASLTFCVARTNGRTVL VIGGLQGPRRHVSREVIKQATRACHGLFPKRVLMEVIFQLASRSNISAIFAVSDEGHVFR ALRYRLSKGRHFHASYDEFWEGLNGKKLSPFCWQLPLQIERKALEEIASKKRAEYRRRFA LLDDIAASVHARIESTVVQGKKQTKI >gi|333596725|gb|GL892087.1| GENE 503 567609 - 567947 296 112 aa, chain - ## HITS:1 COG:no KEGG:ECL_01457 NR:ns ## KEGG: ECL_01457 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 112 1 112 112 191 85.0 7e-48 MKKTLLSLLLLTCASSALAAPQVITVSRFEVGKDNWAFNREEVMLTCRPGHALYVINPST LVQYPLNGVAEQQVASGKSNGQPVSVIQVDDPANPGQKKSLAPFIARAEKLC >gi|333596725|gb|GL892087.1| GENE 504 567965 - 568834 803 289 aa, chain - ## HITS:1 COG:STM1874 KEGG:ns NR:ns ## COG: STM1874 COG1276 # Protein_GI_number: 16765216 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Salmonella typhimurium LT2 # 1 289 2 291 291 283 57.0 3e-76 MLALSYVALRFIHFAALILLFGNALYSVWFAPSSLQRLMTQRFQRQQNIAALVSLMAALL MFGLQSGLMGNGWGDVIRPAVWHSVLGTQFGGVWLWQMVLAAVTAGAAWLTPQKGSRLLL LAMGQLVLLAGVGHAAMNGGATGALHRLNHALHLLCAATWVGGLLPLLYCMQLAKGRWQP AAIFTMMRFSRVGHYAVAGVLLTGIINTLFIVGINVPWQAPYVQLLLFKCALVMMMVAIA LANRYFLVPRFRPETGREQQIFIRMTQAEVVLGALVLAAVSLFATWEPF >gi|333596725|gb|GL892087.1| GENE 505 568836 - 569207 479 123 aa, chain - ## HITS:1 COG:STM1875 KEGG:ns NR:ns ## COG: STM1875 COG2372 # Protein_GI_number: 16765217 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Salmonella typhimurium LT2 # 21 123 21 124 124 126 63.0 1e-29 MHFTPSRIACALVFLLSSAITPAVLAHAHLKQQSPQENTVAVAPEVITLNFSEGIEPAFS GVVVTNAQQQKIKTGAVKRDEKDNAKLIVPLEKPLTTGTYTVDWHVVSVDGHKTKGSYHF SVK >gi|333596725|gb|GL892087.1| GENE 506 569345 - 569575 342 76 aa, chain + ## HITS:1 COG:no KEGG:ECL_01454 NR:ns ## KEGG: ECL_01454 # Name: not_defined # Def: DNA polymerase III subunit theta # Organism: E.cloacae # Pathway: Purine metabolism [PATH:enc00230]; Pyrimidine metabolism [PATH:enc00240]; Metabolic pathways [PATH:enc01100]; DNA replication [PATH:enc03030]; Mismatch repair [PATH:enc03430]; Homologous recombination [PATH:enc03440] # 1 76 1 76 76 132 96.0 5e-30 MNVNLAALPQDEMDKVNVDLAAAGVAFKERYNMPVVAEVVEREQPAHLRDWFRERLIAHR LASVNLSRLPYEPKVK >gi|333596725|gb|GL892087.1| GENE 507 569917 - 570336 181 139 aa, chain + ## HITS:1 COG:ECs2553 KEGG:ns NR:ns ## COG: ECs2553 COG0388 # Protein_GI_number: 15831807 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 138 80 217 218 129 49.0 2e-30 MIAGITLQQHDLRQKGLALFAPSLSTIRRYPQGNGAGVIPGDKRLTIVDNQTDAPELDPE ATLFTSSLAVGEHRWRQSIGSLQRFAHKYAIAVLMANARSGSALWDEKGQLIVRADKGEL LLTGSLGRQGWQGDIIPLG >gi|333596725|gb|GL892087.1| GENE 508 570361 - 571023 771 220 aa, chain + ## HITS:1 COG:STM1878 KEGG:ns NR:ns ## COG: STM1878 COG0847 # Protein_GI_number: 16765220 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 1 217 1 217 232 404 86.0 1e-113 MLRVIDTETCDLQGGIVEVASVDVIDGKIVNPMSHLVRPDRPISAQAMAIHRITESMVAD KPWIEEIIPLYHGSQWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKS RKLSVRTPEGLHHHRALYDCYITAALLIDIVKTSGWTPDDMATITGRPALLTTFTFGKYR GKPVSEVADKDPGYLRWLYNNLDRMSPELRLTLKHYLGEA >gi|333596725|gb|GL892087.1| GENE 509 571005 - 573080 2316 691 aa, chain - ## HITS:1 COG:STM1879 KEGG:ns NR:ns ## COG: STM1879 COG1770 # Protein_GI_number: 16765221 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Salmonella typhimurium LT2 # 1 680 1 680 683 1184 82.0 0 MPPKARRTPYAITTHGDTRIDNYYWLRDDSRSRPEVLDYLHEENDYGRQVMASQQALQDQ LLNEMVQRIPQRDVSAPWCKNGYRYRHIYEPGNEYPIYQRQSVLSAEWDEWEILLDANKR AAHSEFYTLGGMSISPDNAIMALAEDYLSRRQYGLRFRNLETGNWYPEMLDNVSPDFVWG NDSETVYYVKKHASTLLPYQVWRHTVGTDSADDELVYEEKDETFYVSLHKTSSRHYVIIF LASATTSEVLLLDAELPDAQPLCFLPRRKDHEYSLDHFQHSFYLRSNREGKNFGLYKTKV RDERKWEVLIPARDQVMLEGFTLFTDWLVVEERQRGLTSIRQINRKTREVVGIAFDDPAY VTWIGFNPEPESSRLRYGYSSMTTPDTLFELDMDTGQRQVIKQAEVRGFESENYRSEHLW VTARDGVEVPVSLVYHKAHFNKGKNPILVYGYGSYGSSMDADFSSSRLSLLDRGFVYAIA HIRGGGELGQHWYEEGKFLKKKNTFNDYLDVCDALIAQGYGDPQRCFGMGGSAGGMLMGA VINQRPELFKGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDETYYRYMKEYSPYDN VEAKAYPHMLVTTGLHDSQVQYWEPAKWVAKLRELKTDDNLLLLCTDMDSGHGGKSGRFK SYEGVALEYAFLIGLAQDTLPGQAGTQASPK >gi|333596725|gb|GL892087.1| GENE 510 573156 - 573806 820 216 aa, chain - ## HITS:1 COG:STM1880 KEGG:ns NR:ns ## COG: STM1880 COG2979 # Protein_GI_number: 16765222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 216 1 219 219 318 84.0 5e-87 MSGWMNQLQSLLGQKGSSSGEQGLSKLLVPGALGGLAGLLVANKSSRKLLTKYGTGALLA GGGAIAGSVLWNKYKDKVRNAHQDEPQYGQQVSPLDLRTERLILALVFAAKSDGHIDASE RAAIEQQMREAGVEEQGRALVAQAIEQPLDPQRLAQSVKNEEEALELYFLSCAAIDIDHF MERSYLNALGDALKIPQDVREGIEQDIQQQKQTLAG >gi|333596725|gb|GL892087.1| GENE 511 573979 - 575157 1196 392 aa, chain + ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 646 84.0 0 MTRLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYKDAPAMHVAHRAYVID MLDGNALCTLIADEKPDFVVPEIEAIATEMLVALEQEGQRVVPCATAAKLTMNREGIRRL AAEELQLPTSSYRFAGDKAAFLQAVEEIGYPCIIKPVMSSSGKGQSFIRDSSTLDKAWDY AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCDPIGHRQEDGDYRESWQPQQMS ALALARAQEIARKTVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVEGAVGAGLQVRLFGKPEIDG SRRLGVALATGDNVGDAVARAKKAAKAVNVTG >gi|333596725|gb|GL892087.1| GENE 512 575230 - 576612 511 460 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_5147 NR:ns ## KEGG: Pat9b_5147 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 56 363 56 359 463 72 24.0 3e-11 MSAWWLYKKQPDTDTTVPVAMIVFLYVIVVATGLAIRALTWPEQEHVTAIFFVPSVILPI CLVSFLVFIGFIFHDANIHYAETRKFIAKEQEINLKAYARKNMAIAAWSSITPLEQPALN MLKLEGEFPLAPKTPVKIQLEDRFDQTRSEQMFYRLLAPMAEKLKGNNYRIFEAVVWVRG GSESVIDELRRTLERLGVETASTCKIESSMECPDYAIVSQWMNLSDYRAENRLIIIVDLH EESGESKSMENACAFLLTSHYVQEEGKKPVYLYQPMSDVTDVEEKMAIYLMAGSVLTPKN LWYTGLSRIEKYPLMQALDEKALSMERLDIDASLGAKSAGYRWLALAFAADAVKYAQGEQ LVAYSDKNKFCITALSSRKTAIPKKLVWCNWNHPLYPAGMAALFSVLSLIAYRISFPAQN DPPAIWALMASIFIPFVIFIGMGIFIFISKTNAAYEDMEF >gi|333596725|gb|GL892087.1| GENE 513 576612 - 576869 143 85 aa, chain - ## HITS:1 COG:no KEGG:Rahaq_4803 NR:ns ## KEGG: Rahaq_4803 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 1 84 1 83 84 92 57.0 6e-18 MKGVIRLNDPLISGGKVTKASGADFMGQPVALKDDLVQCPLHKGTFPINECHPNWTMHGR GVVVEGCRAACGCEIKSTLSVAGAS >gi|333596725|gb|GL892087.1| GENE 514 578074 - 580188 1292 704 aa, chain - ## HITS:1 COG:no KEGG:Pat9b_2903 NR:ns ## KEGG: Pat9b_2903 # Name: not_defined # Def: hypothetical protein # Organism: Pantoea_At-9b # Pathway: not_defined # 19 697 20 699 714 580 47.0 1e-164 MTEAKTKPYAPRVVSEGDIPVHKTLGEVAQTRNVAVPRPMPGIVILVHGVNDVGEAYQNQ EKGILVGLGKRLNRQDFYAHEWKDYRIITPGRSPIIPFYWGYKPVTHDDYRADQKRYREE VGKLSDKAHLPYDAYQEDNETNKKALGNDGKGPFQYQNDNFKNALDTNFAKGGGTFANAT TTIPDMLGPGAGGFGVAAAGFASLHFNDGDFTHPIYENPHRIYQFFAAQRLADLIIQIRQ PLVTQNDVINIVAHSQGTIITMLANMLVKQAGYDPANCVILNHSPYSLESRVAENIQPGY QQTDDARQQTFKNFCRLMHTQWKGGGKMAERELLALEASCTLRKPSDNPLRTDDRYCRSN DGKVYNYFCPNDGVVSLENVQGFGWRGIPQNIASDIPNLFQRVFYQHGEVGNIPDAKPFE LPPRNEGDAKYAFLTNASYSARDVVINGEELPEPFIFKLQGEDNHPDNDPKTSDKPYTYY VDPDSPDAYISYSAKASAIKRTVTTTFAVNRYQNIGWQPGHVLSASELKEESFERKHEVI YGEVSGSRDFQLVTLTWKKTPEELQAEWQKIDPVGYSQHSSIVMSEFVPSHAMAFDLAIG QCKSFDYQAGKFWEGLLHRADWRDPQNGNQFAKDYYKTGRLNEQFTKNYMNKPDEVLPTG EFGVKNQFNISTTVKPSRDLAIGNQEIANLQWAMPKPKSESQLA >gi|333596725|gb|GL892087.1| GENE 515 580185 - 582698 1369 837 aa, chain - ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 23 577 20 571 571 411 43.0 1e-114 MRGKSEAAQRQDTLNRYLLYFPRSKNVISDVHSFTGKEILNEPYRYTIRFTSPDQNIAVD TVLNQRVEFILRAPNLEASWHGHTSWLPVRQINGTITQFSRLMSSGDEALYECVLEHELA LLDQNYRSAVYMNMAVPELVTKLMKDSGHFEGYNIDFDQLSHSYPRREMIVQWKETDLRF IRRLLAEIGIWFRFENHNKVKTETVVIFGDSARRYNFSDKQMPYVRHSGMTSYNEYITDL EEQHGLIPKKVLVRTYNYRDPQSPQTERAIQTSNIPVGITSGHHYHYADHYLTGGDFHGE EAETAAFYARLRYERLLTGQRVLGATTSDPELQPGIMFYPAGPVPDGFKSGFVITAMTIR GSRAEHYRAVLSGIPCLHGYSFRPEYLSRPVIAGTVPARVMAIGRDKTYAGLDAVGRYRV KFDFDLDEKRVGFESALVRLGRLYAGDTFGIHFPLLEGTEVAVGFEGGDPDRPFIAHVMH DGSHPDLVTNRNDTRNVIRTAALNKIRLEDRRGQEHIKISTEYGKGQVSVGHLVDAEGKK RGEGVEARTDDWMALRAAKGVMITTEAQPRAGGKQLDMTAAIAQLEKALSLAMTLQQSAL TAGASNVETDRQNALNQTLSHLAEPGIVAYGKSGIAHVTPDSLQLSAGKDLIATAGGNAS VNMVKKFSLAVGEKLSLFARKLGIQMIAGAGDITTQAQRGEMHMLSQQDFTLTSTDGKMN GSARKGMQFVCGGGGIRISPTGLVTIFSPTGIELKAPSLKYDGAESVSVPTPSFEKGAFK LRYKLHAGDDPEQILANKKFRLTSTSGQVVEGVTDSAGHSPLLDADDLDSYKMEIME >gi|333596725|gb|GL892087.1| GENE 516 583078 - 583719 913 213 aa, chain - ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 375 97.0 1e-104 MKNWKTSAEAILTTGPVVPVIVVNKLEHAVPMAKALVAGGVRVLEVTLRTACAMDAIRAI AKEVPDAIIGAGTVLNAQQLAEVTEAGAQFAISPGLTEPLLKAATEGSIPLIPGISTVSE LMLGMDYGLKEFKFFPAEANGGTKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC IGGSWLVPADALEAGDWDRITKLAREAVEGAKQ >gi|333596725|gb|GL892087.1| GENE 517 583759 - 585570 2118 603 aa, chain - ## HITS:1 COG:STM1885 KEGG:ns NR:ns ## COG: STM1885 COG0129 # Protein_GI_number: 16765227 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Salmonella typhimurium LT2 # 1 603 1 603 603 1125 92.0 0 MNPTLLRVTQRIAERSKETRAAYLARIEQAKSETVHRSQLACGNLAHGFAACQPGDKDAL KSMLRNNIAIITSYNDMLSAHQPYEVYPSIIRNALHSVNAVGQVAGGVPAMCDGVTQGQD GMELSLLSREVIAMSAAVGLSHNMFDGALYLGVCDKIVPGLVMAALSFGHLPAIFVPSGP MASGLPNKEKVRIRQLYAEGKADRQALLEAEAASYHAPGTCTFYGTANTNQMVVEFMGMQ LPGSSFIQPDAPLRKALTEAAARQVTRLTGNGNEWMPMGKMVDEKVIVNGIVALLATGGS TNHTMHLVAMARAAGILINWDDFSDISSVVPLMARLYPNGPADINHFQAAGGVPVLMREL LKGGLLHEDVNTVAGFGLHRYTLEPWLNNGELDWREGASDSLDPQVIATFEQPFSPHGGT KVLSGNLGRAVMKTSAVPEENQVIEAPAVVFESQHDVLPAFDAGLLDKDCVVVVRHQGPK ANGMPELHKLMPPLGVLLDRRFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD GDMIRVNGQTGELTLLVDEAELAARQPHIPDLSASRVGTGREMFGALREKLSGAEQGATC ITF >gi|333596725|gb|GL892087.1| GENE 518 585805 - 587280 1960 491 aa, chain - ## HITS:1 COG:STM1886 KEGG:ns NR:ns ## COG: STM1886 COG0364 # Protein_GI_number: 16765228 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 491 1 491 491 975 95.0 0 MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQIHPDTRILGVGRADWDKEAYTN VVREALETFMKEKIDESLWDKLSGRLDFCNLDVNDVGAFTRLGEMLDQENRVTINYFAMP PSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSREINDQVGEFFEECQVYRIDHYLG KETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDQAGQMRDMIQNHL LQILCMIAMSPPSDLTADSIRDAKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPG YLEEEGANKSSNTETFVAIRVDIDDWRWAGVPFYLRTGKRLPAKCSEVVVYFKNPELNLF KESWQELPQNKLTIRLQPDEGVDIQILNKVPGLDHKHNLQTTKLDLSYSETFNQTHLADA YERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAADQDAPKPYQAGTWGPVASVAMI TRDGRSWNEFE >gi|333596725|gb|GL892087.1| GENE 519 587637 - 588506 710 289 aa, chain + ## HITS:1 COG:STM1887 KEGG:ns NR:ns ## COG: STM1887 COG1737 # Protein_GI_number: 16765229 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 287 1 287 289 495 91.0 1e-140 MNMLEKIQFQLEHLSKSERKVAEVILAAPAQAIHSSIAALAQESGVSEPTVNRFCRSLDT RGFPDFKLHLAQSLANGTPYVNRNVDEDDSVDAYTAKIFESAMATLDHVRQSLDMSSVNR AVDLLTQAKRIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSEDDVVV LISHTGRTKSQVELAQLARDNDAMVIALTTAGTPLAREATLAITLDVPEDTDMYMPMVSR LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKELLIKSDVP >gi|333596725|gb|GL892087.1| GENE 520 588621 - 590063 1698 480 aa, chain + ## HITS:1 COG:STM1888 KEGG:ns NR:ns ## COG: STM1888 COG0469 # Protein_GI_number: 16765230 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Salmonella typhimurium LT2 # 1 480 1 480 480 862 96.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKIIAAGANVVRMNFSHGTPEDHKLRADKVREIAAK LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLSKGEGDKEKVGIDYKGLPAD VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA DIVTAAQIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCDQDAMDDVI LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDIQFDN VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY RGVTPVYFDSTNDGVAAAHDAVNLLRDKGYLVSGDIVIVTQGDVMSTIGSTNTTRVLTVE >gi|333596725|gb|GL892087.1| GENE 521 590107 - 590973 871 288 aa, chain - ## HITS:1 COG:ECs2565 KEGG:ns NR:ns ## COG: ECs2565 COG1560 # Protein_GI_number: 15831819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 288 36 323 323 513 83.0 1e-145 MALLPASLRDPVLGTVGRIAGRVGKSARRRAQINLLYCFPDKSDAEREAIIDDMYTTAPQ AMAMMAELALKGPEKIVERVDWKGLEIIDEMRRNDEKVIFLVPHGWGVDIPAMLMASQGQ KMAAMFHNQGNKIYDFVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPE HSEFVDFFATYKATLPAIGRLMKVCRARVIPLFPVYDGKTHRLSIEVRPPMDDLLTADDH TIARRMNEEVEVLVGPHKEQYTWILKLLKTRKPGETEPYKRKELFPKK >gi|333596725|gb|GL892087.1| GENE 522 591195 - 592451 1418 418 aa, chain - ## HITS:1 COG:STM1890 KEGG:ns NR:ns ## COG: STM1890 COG0739 # Protein_GI_number: 16765232 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 1 418 22 439 439 776 91.0 0 MLGSLTVLTLAVAVWRPYVYHPSSAPIIKTIELEKSEIRSLLPEASEPIDQAAQEDEAIP QDELDDKIQNEAGIHEYVVSTGDTLSSVLNQYGIDMGNISQLAASDKELRNLKIGQQLSW TLTPDGDLQRLTWEMSRRETRTYDRTANGFKMTSEMQQGDWVNSVMKGTVGGSFVSSARD AGLTSAEISSVIKAMQWQMDFRKLKKGDQFSVLMSREMLDGKREQSQLVGVRLRSDGKDY YAIRAEDGKFYDRSGTGLAKGFLRFPTAKQFRVSSNFNPRRLNPVTGRVAPHRGVDFAMP QGTPVLAVGDGEVVMAKRSGAAGYYVAIRHGRTYTTRYMHLRKLLVKPGQKVKRGDRIAL SGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTGKDRKDYLAQVKEVMPQLRFD >gi|333596725|gb|GL892087.1| GENE 523 592530 - 593474 585 314 aa, chain - ## HITS:1 COG:STM1891 KEGG:ns NR:ns ## COG: STM1891 COG4531 # Protein_GI_number: 16765233 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Salmonella typhimurium LT2 # 1 314 20 333 333 542 89.0 1e-154 MLQKNTLLFAALSAALWGTTAQDVNAAVVASLKPLGFIASAIADGVTETQVLLPDGASEH DYSLRPSDVKRLQNADLVVWIGPEMEAFMQKSARQLPEEKQVTIAGLSGVKPLLMKGAED EGDEHDHEHAHDEKGDDHHHHGEYNMHLWLSPEIARLTAVAIHDKLVELMPQSRIKLDAN LKDFEAQLAATDKQVGNELAPLKGKGYFVFHDAYGYYEKHYGLTPLGHFTVNPEIQPGAQ RLHEIRTQLVEQKATCVFAEPQFRPAVVEAVARGTSVRMGTLDPLGTNIQLSKASYSQFL SQLANQYASCLKGD >gi|333596725|gb|GL892087.1| GENE 524 593552 - 594307 235 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 202 1 212 305 95 32 1e-17 MTTLVSLENVSVSFGQRRVLSDVSLNLKPGKILTLLGPNGAGKSTLVRVVLGLVAPDAGV IVREDKLRIGYVPQKLHLDATLPLTVSRFLRLRPGTRKADILPALKRVQAGHLVDAPLQK LSGGETQRVLLARALLSSPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELNCAVLMVSHD LHLVMAKTDEVLCLNHHICCSGTPEVVSMHPEFISMFGHRGAEQLGIYRHNHNHRHDLQG RIVLRRGNGHS >gi|333596725|gb|GL892087.1| GENE 525 594304 - 595089 1012 261 aa, chain + ## HITS:1 COG:STM1893 KEGG:ns NR:ns ## COG: STM1893 COG1108 # Protein_GI_number: 16765235 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 261 1 261 261 383 94.0 1e-106 MIELLLPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV IVVTLLLAAGLVWLEKRPHLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL AVTPEDLISIAIGVAVVLGILLWQWRNLLAMTVSPDLAFVDGVKLQRVKLLLMLVTALTI GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGIAVIIGMIAVTGGLTFSAFYDTPAG PSVVLCAAVLFIFSMMKKTAN >gi|333596725|gb|GL892087.1| GENE 526 595338 - 596348 1438 336 aa, chain - ## HITS:1 COG:ECs2570 KEGG:ns NR:ns ## COG: ECs2570 COG2255 # Protein_GI_number: 15831824 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 617 94.0 1e-177 MIEADRLVSAGTIQPDDVVDRAIRPKLLDEYIGQPQVRSQMEIFIQAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR LEFYQVPDLQHIVGRSARYMGLDMSEEGAFEVAKRSRGTPRIANRLLRRVRDFAEVKHDG TISADIAAQALDMLNVDAEGFDYMDRKLLLAVLDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPAMP >gi|333596725|gb|GL892087.1| GENE 527 596357 - 596971 699 204 aa, chain - ## HITS:1 COG:ECs2571 KEGG:ns NR:ns ## COG: ECs2571 COG0632 # Protein_GI_number: 15831825 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Escherichia coli O157:H7 # 1 204 1 203 203 353 92.0 8e-98 MIGRLRGIIIEKQPPLVLLEVGGVGYEVHMPMTCFYELPEAGKEAVVFTQFVVREDAQLL YGFNNKQERTLFRELIKTNGVGPKLALAILSGMSAPQFVNAVEREDPAALIKLPGIGKKT AERLIVEMKDRFKGLHGDLFTPAADLVLTSPGAPASDDDAEQEAVAALVALGYKPQEASR MVSKIAKPDASSETLIREALRAAL >gi|333596725|gb|GL892087.1| GENE 528 597052 - 597573 609 173 aa, chain - ## HITS:1 COG:STM1898 KEGG:ns NR:ns ## COG: STM1898 COG0817 # Protein_GI_number: 16765240 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Salmonella typhimurium LT2 # 1 173 1 173 173 301 98.0 4e-82 MSIILGIDPGSRVTGYGVIRQVGRQLTYLGSGCIRTKVDDLPSRLKLIYAGVSEIITQFQ PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQDLPVFEYAARQVKQTVVGIGSAEKS QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR >gi|333596725|gb|GL892087.1| GENE 529 597608 - 598348 964 246 aa, chain - ## HITS:1 COG:STM1899 KEGG:ns NR:ns ## COG: STM1899 COG0217 # Protein_GI_number: 16765241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 426 94.0 1e-119 MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAARLGGGDPASNPRLRAAVDKALSNN MTRDTLNRAIARGVGGDEDANMETIIYEGYGPGGTAVMVECLSDNRNRTVAEVRHAFTKT GGNLGTDGSVAYLFSKKGVISFEKGDEDAIMEAALEAGAEDVVTYDDGAIDVYTAWEEMG AVRDALEAAGLKADNAEVSMIPSTKADMDAETAPKLLRLIDMLEDCDDVQEVYHNGEISD EVAATL >gi|333596725|gb|GL892087.1| GENE 530 598376 - 598819 492 147 aa, chain - ## HITS:1 COG:ECs2575 KEGG:ns NR:ns ## COG: ECs2575 COG0494 # Protein_GI_number: 15831829 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 3 147 6 150 150 249 87.0 1e-66 MAYKRPVSVLVVIYAEDTKRVLMLQRRDDPDFWQSVTGSLEEGETAPQAAAREVKEEVAI DVAREQLTLKDCQRTVEFEIFSHLRHRYAPGIERNTESWFCLALPHEREIVFTEHLTYRW VNAADAAALTKSWSNRQAIEEFVINAA >gi|333596725|gb|GL892087.1| GENE 531 598821 - 600593 2511 590 aa, chain - ## HITS:1 COG:ECs2576 KEGG:ns NR:ns ## COG: ECs2576 COG0173 # Protein_GI_number: 15831830 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 590 1 590 590 1127 93.0 0 MRTEYCGQLRQSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA SELRNEFCIQVTGTVRARDEKNINAEMATGAIEVLASDLTIINRAEALPLDSNHVNTEEA RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT AEQVREVMEALVRSLWNDVKGVELGDFPIMTFAEAERRYGSDKPDLRNPMELVDVADLVK AVEFAVFAGPANDPKGRVAALRVPGGAALSRKQIDDYGNFIKIYGAKGLAYIKVTERAKG LEGITSPVAKFLNADIVEAILERTGAQDGDMIFFGADNKKVVADAMGALRLKLGKDLNLT DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVANAYDMVING YEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPAALAELGIEVVKKEEKN >gi|333596725|gb|GL892087.1| GENE 532 600858 - 601424 650 188 aa, chain + ## HITS:1 COG:STM1902 KEGG:ns NR:ns ## COG: STM1902 COG1335 # Protein_GI_number: 16765244 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 333 86.0 9e-92 MLKLDATKTALVVIDLQEGILPFAGGPHTADDVVSRAARLAEKCRASGSPVVMVRVGWSA DFAEALKQPVDAQAPAQALPDNWWTYPVSLGKRDSDIEVTKRQWGAFYGTDLELQLRRRG IDTIILCGISTNIGVESTARNAWELGFNLVIAEDACSAASTDQHQGSMTHIFPRIGRVRS TDEILSAL >gi|333596725|gb|GL892087.1| GENE 533 601789 - 602055 217 88 aa, chain + ## HITS:1 COG:no KEGG:ECL_02708 NR:ns ## KEGG: ECL_02708 # Name: not_defined # Def: virulence protein MsgA # Organism: E.cloacae # Pathway: not_defined # 1 79 1 79 79 128 87.0 7e-29 MFVELVYDKRNVDGLVGAREIILAELTKRVHQIFPDAEVRVKPMQANALNSNASKSDREK LNRMLEEMFDESDMWLTSESPTVRQVGI >gi|333596725|gb|GL892087.1| GENE 534 602151 - 602267 58 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVPANSWIDVRLDMPGDSIWNKRQKESSEAALQEPAS >gi|333596725|gb|GL892087.1| GENE 535 603280 - 604200 348 306 aa, chain - ## HITS:1 COG:no KEGG:ECL_01716 NR:ns ## KEGG: ECL_01716 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 306 16 321 321 535 87.0 1e-151 MEITAGLRCPSFGANFDSGYQKAKYADIAGYVSGAQVLFIPHATAYLDSGLLHKMNSVTI SGGRVTQNSTMKDVSISERESTYTFPGSIWQIFPPGQRKGEGLLIDDSTDFLAITNATQS GQCIWKGTVNVPTGGWAVPTIAGYDKSKYIVFGRCNSGNTVDFDGNTVRFFSPPSTNDDA PTTGTIDIVIFASGVAPQPGTGLNILNAAGACTFSTTKRPFVYLNQLWTPSKNAVSIGSG YVPLGRFGLMAHEVNGMYVYRMFGIKIQNGSASVQGGKYLGRERYAIFGNDTVTPLNLPV LPDMYV >gi|333596725|gb|GL892087.1| GENE 536 604247 - 608074 2771 1275 aa, chain - ## HITS:1 COG:YPO2131 KEGG:ns NR:ns ## COG: YPO2131 COG4733 # Protein_GI_number: 16122366 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 5 1117 6 1058 1067 1031 50.0 0 MTTKIKGRKSGSKKGHTPVESPDSAQSIARAKMLIALGEGEFAGGLTGQTIFFGDGTSYT PLQNADGSENFPGVVWEFRSGVQDQSYIQGFPGVENELTVGYELKFAVPYIRSISNTQLS AVRVRVGWATLLWQKDNGDKVGTRVEYAIDLSVDGGAYETVINGVVDDKATTLYERSHRI NLPKATTGWQLRVRRVSPDATSINVVDTMKVQAVTEIIDAKLRYPHTALLYVEFDARQFP NGIPQVVCSPKGRIIRVPDTYDPETRTYSGTWTGTFKWAWTDNPAWIFYDIVLSERFGLG QRIGSEQLDRWELYRIAQYCDQLIPDGRGGMEPRHRCNVYIQDRADAWTVLRDLAARFRG MTYWGDNRMYVLADMPDDTSHIYNHANVVNGKFTFSDPSETTRYTTALVNWSDPKNHYKD TPEPVYDNDLAMRYDYRQIELTAIGCDRQSEANRHGRWILLTNGAGEVVTFDTGLDVPPV GKVIGVAANELAGRIIGGRISAVNGRTVKLDRAADVKPGDRLFVNLPSGSAQARTVQAVN GEMVTVTTPWSETPEAESNWAVEADDLYMALFRVTGVTDNNDGTYAVTGTTYNPDLYFAV DHGARLDERPISVIPPGVQAPPDNVSIDSYSQVSQGIAVTTMRVAWDSVSGAIAYEAEWR KDSGNWVSVPRTSTQGFEVPGIYAGRYLVRVRAVNAMDASSVWSFSDEVALTGKVGNPPK PVGFIASDNVVFGIELSWGFPANTDDTLKTEIQYSLTGTEDDAMLLADVPYPQRKYQQMG LKAGQIFWYRAQLVDRSGNESGYTEFVRGQASIDVSDITDAILEDMKGSDTFKDLIESAV ESSEKFAELADAIKENANGLAAAVGSNKQTAEAIIGNALAIADVVVRQTAQQGANSATFE QLREVIATETEARVTDVTRLEAKTAQNEAGITDVRQALATETEARASAVSQLTAATQVAS DKADSAAAVGAQNTASITDLSQVVTDLDSSMASRLEELGAQTDKASGGIQSNSIALITST LAQVDQQVRLSAQYGDSKASIDRIDNVMASDREATARSLLSLQTDVNGNKAEINSLNQTF SNYQQATATQINGITATINGHTSAITTNAQTIANVNGDLKAMYSIKVGLSSNGQLYAAGM GIGVENTPSGMQSQVIFLADRFGVTHQAGATVTLPFVIQNGQTIIRDTVIGDGTIGNAKI GSYIQSSTWDGTGNVGWHINKSGYATFNNVTVRGSIYATNGNFSFNGSGNTTVINGNGVT INIPGGGRIVLGTWT >gi|333596725|gb|GL892087.1| GENE 537 608125 - 608712 595 195 aa, chain - ## HITS:1 COG:YPO2129 KEGG:ns NR:ns ## COG: YPO2129 COG4723 # Protein_GI_number: 16122364 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 5 194 10 205 206 191 53.0 7e-49 MQNCTVIKLSGSMAQRFGRTHYRVLDTSKEVFRALSATIDGFEGWMRQARALGLDFVIFR NRRNIGEDEFGMCSAGNELRIIPVIRGSKRAGVFQIVAAAAIAAFAWWNPIGWSAATQGA LYAAAGSMAVGGVVQMLSPQVAGLRSREDPDNKPSYAFGGPVNTTAAGNPVPLLYGQREI GGAIISAGIYTEDQQ >gi|333596725|gb|GL892087.1| GENE 538 608712 - 609422 654 236 aa, chain - ## HITS:1 COG:YPO2123_1 KEGG:ns NR:ns ## COG: YPO2123_1 COG1310 # Protein_GI_number: 16122358 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Yersinia pestis # 1 125 1 123 123 176 66.0 4e-44 MRSKTISAILAHAESAFPSECCGLVIQKGRVEKYIPCENRAATPGQQFEIAPEDYAAAED HGTVVAVVHSHPGDGATTQPSELDMLMCDATEVPWVIASWPEGDIRTIMPRGDRPLTGRQ FVLGHADCWTLLMDYFRTEHGITLPNYSVERHWWEQGENLYMDNWYDCGFREFSGQPHPG DVVIMQVQSPVANHAGVLLEGNMLLHHMYGQLSQRVPYGGYYLDRTIKIVRHQELM >gi|333596725|gb|GL892087.1| GENE 539 609425 - 610183 599 252 aa, chain - ## HITS:1 COG:YPO2122 KEGG:ns NR:ns ## COG: YPO2122 COG4672 # Protein_GI_number: 16122357 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 251 1 249 250 321 61.0 1e-87 MSISSDVQKLEPGEKVRLLEVDGSAFGAGILRFHNETIAHTEAELAAAGGDENLLDPKSL WWQGVEYSAWPFQLEGLSFSSDGQSARPKLTVANIKGTIGALCRRFQGMARAKVTIHETF AHYLDARNFSQGNPDADPLEERKQVFYVDRKSGGDDETVEFELSSPADLRGQQIPTRQIQ PLCTWCMRGWYKTGNGCTYAGQNGWFDKDGNQVDDPALDVCSGLLSTGCKPRFGENEELD FGGMPGASLLRS >gi|333596725|gb|GL892087.1| GENE 540 610521 - 612977 1209 818 aa, chain - ## HITS:1 COG:ECs1983 KEGG:ns NR:ns ## COG: ECs1983 COG5281 # Protein_GI_number: 15831237 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 # 400 761 631 974 1026 221 41.0 4e-57 MASKSLGTLTIDLIAKVGGFVAGMEKAERSSGKWRKQIESDAKAVGSAISSVGVAAAGAA VAASAAGIALLKSTSDQITETDRWAKSLRVSTQELLAWQFAAEKAGVSGDQMADIFKDIG DKIGDAVLNKSGEAVDALNALGLSADKLSKTTPDKQLLAIGEALSKVSTNAGKITILESL GNDLSKLLPLFDNNNEKLKSFIQQAKDYGVAPDAKSINDLLKVNELFQDIDAQVKGLKIE IASGLAKVDLSQLNRSLSDVKNILTDPSVLQGLASLVSQIAGLAGWMAKAASEAGKLAVA SGNRMAALGGNVDMSNIDQINERIEYLQRNLSGRNGFYSQGESFFGWLTGGDDSVKTLSE ELKGLIDQREKLSKQKNAVNLPPTTQATTAPAGSFALGVNEVNGKPTVDAGAKKLEGAFK ATEQSYLRQIALIDTTGKKTAEVTEQQKLQFDIADGKLEGLNATQRQRLEQLATEVDRLN AVKKANEDNLKVAEYVANLQRENANSAATLNADIVGAGMGDKTRDRMRERLAVEREFNEK RADLQLRYLTGEIRNQGEYDRYTGELEKAQAERLGNYESYYQQIDQLDADWVTGARDGLA NWVDDATNYSSQAASAMQSAMSGITSNIVDMLNDNEASWNDWSVSVLKSIQTVLVNMAIA NAVSSIGSLFSFGATAGGSTPSGSYASAAAGVKLNAKGGVYESADLSKFSNSIVNSPTMF AFAKGAGLMGEAGPEAIMPLTRAADGSLGVRALDSGQGQGGGLSVSIGDINFNSQTQQPA SQGIASAAGRQLTDAILRTVNDEVSRPGTPLWRAIKGV >gi|333596725|gb|GL892087.1| GENE 541 613015 - 613479 141 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|262044695|ref|ZP_06017747.1| ## NR: gi|262044695|ref|ZP_06017747.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] # 1 153 1 154 155 123 44.0 4e-27 MKNFGWLLSLIGVLLGIYALLMDVTVPAGDGTNVVNFGLLSLRQNLVIIAGFLFLGGLIV SALRRKRPVPVVDYTELDRIDAEYFVIHADSGDRLDILAIDRVTLMLLGKYSKSSVSDIM LMNRPLIDKWLSSLPFELQKDFRRQLEDRLKQNS >gi|333596725|gb|GL892087.1| GENE 542 613692 - 614177 93 161 aa, chain - ## HITS:1 COG:no KEGG:PLES_25531 NR:ns ## KEGG: PLES_25531 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 117 1 117 119 162 72.0 3e-39 MKLTLDSLKQAGAFTGRPVEKEITWKQGEQELKATVFIRPMGYHSAMTDVMAANGRVDGV AGRIAASICDEAGHPVFSPADITGEADPERGALDGQLTIALLLAIQEVNDLGKSTSSAPK TSSGASSSSTASAEEQSPKRGKRSASKSRSSGRNTGNDTVA >gi|333596725|gb|GL892087.1| GENE 543 614180 - 614677 371 165 aa, chain - ## HITS:1 COG:no KEGG:PLES_25521 NR:ns ## KEGG: PLES_25521 # Name: not_defined # Def: hypothetical protein # Organism: P.aeruginosa_LESB58 # Pathway: not_defined # 1 164 1 173 173 186 58.0 3e-46 MSVLTQGTQLYLLANGAVSEVECITAFSPGSNPADQIEDTCLSEKNDRTYKRGLRTPGAA SLTLNADPKNASHIMLYNLSISDDEADQDLTFAIGWSDGEAAPTAAASGTSGAVDGLALP DSRTWFVFKGYVSDFPFDFAANTVVSTSASIQRSGSAVWVPKASA >gi|333596725|gb|GL892087.1| GENE 544 614725 - 615090 483 121 aa, chain - ## HITS:1 COG:no KEGG:PputW619_1344 NR:ns ## KEGG: PputW619_1344 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_W619 # Pathway: not_defined # 1 121 1 122 122 137 59.0 1e-31 MIAPIFSVCAASPPVVALLGGDTLRLYPFGQQDDNVVYPYVVWQNVTGSPENYLNQRPDA DSFTLQVDAYADTVDEVIAVAAALRDAIEPHAYITRWGGQEKDPETRRYRYSFDVDWIVK R >gi|333596725|gb|GL892087.1| GENE 545 615087 - 615572 245 161 aa, chain - ## HITS:1 COG:no KEGG:Pput_4109 NR:ns ## KEGG: Pput_4109 # Name: not_defined # Def: HK97 family phage protein # Organism: P.putida_F1 # Pathway: not_defined # 1 158 1 158 161 221 73.0 7e-57 MADGVDFSIIGVEALLGKLSSVSDDLRRRGGRAALRRAGNVIVEKAKANAARIDDPLTGR SIAANVAMRWNGRLFKTTGNLGFRIGVLHGAVLKKHPDLGENAPTPHWRLIEFGTENVRA QPFMRPAAESSVGEVVNVFATEYEKAIDRAIKRAAKKGVPP >gi|333596725|gb|GL892087.1| GENE 546 615565 - 615897 201 110 aa, chain - ## HITS:1 COG:RSc1686 KEGG:ns NR:ns ## COG: RSc1686 COG5614 # Protein_GI_number: 17546405 # Func_class: R General function prediction only # Function: Bacteriophage head-tail adaptor # Organism: Ralstonia solanacearum # 1 110 1 108 108 67 38.0 8e-12 MQAGKLNKRITLQKPVKTQSPVTGAVVNGWADQAELWANVTDLSARDFVAAQAGQSEVTT RITIRWRDDVTDKHRILYRGRVYDIQGVLEDDKSGREYLTLPCSRGVNDG >gi|333596725|gb|GL892087.1| GENE 547 616140 - 616445 220 101 aa, chain - ## HITS:1 COG:no KEGG:PputW619_3941 NR:ns ## KEGG: PputW619_3941 # Name: not_defined # Def: phage protein # Organism: P.putida_W619 # Pathway: not_defined # 1 100 4 99 99 70 44.0 2e-11 MAQIKAHLRVDSDAEDTLIGAYASAAVDYVEHFCDGALVEVLTPLAEEKEPPREVLFTSG IWAAMLLLIGHWYANREAASQNLAETPLGVEALLIQHRRWH >gi|333596725|gb|GL892087.1| GENE 548 616414 - 616626 248 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSHYHLGTVSQGETRVVKKEIGESLVKLHLAEEVEPEKAESQDPEKTKTGGKGGNKRGA DGADKGASQG >gi|333596725|gb|GL892087.1| GENE 549 616684 - 617847 1340 387 aa, chain - ## HITS:1 COG:no KEGG:PMI0927 NR:ns ## KEGG: PMI0927 # Name: not_defined # Def: major capsid protein # Organism: P.mirabilis # Pathway: not_defined # 1 384 1 384 388 503 65.0 1e-141 MTELSVLEKAIESSQKEVKQLIEEQRKSINENGEINKKLQEDLTKAQDELKTNGNRLFEL EQKLAGNAPEQTTKKSFSERVSEDLIKNWNGDRAKAKVTSFDKALGSGAASAGALVQPQQ VPGILTPGLRRLTVRDLLAQGRITSNALEYVRENIFTNAAAPVAEGALKPESNITFTKET ANVKTIAHWMQVSRQIMDDAPALQSYINSRMMYGLALVEENQMLNGDGTGDNLLGLNAVG TDYETALNADGDNGADILAHAIYQVSLSEFEADGIILNPRDWHRIALLKDANGNYILGGP QAFASKVLWGLPVVSTTAQAAGSFTVGAFGLASQVWDRMDATIEISNQDRDNFVKNMLTI LCEERLALAHYRPAAIVTGSMTVSSGA >gi|333596725|gb|GL892087.1| GENE 550 617859 - 618539 611 226 aa, chain - ## HITS:1 COG:AGc1747 KEGG:ns NR:ns ## COG: AGc1747 COG3740 # Protein_GI_number: 15888296 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 163 17 160 190 80 35.0 2e-15 MGAMMPDIHKTLAFDQTEIKFTGDGSKGTFEGYASVFNNTDSDGDIILPGAFAGVVANQS RKVAMFFNHQTRAIPVGKWDAMHEDEKGLFVRGQLTPGLSLAEDLKAAMQHGTVEGMSVG FSVGPDDYSVGTTGLIFKNISYLREISVCTFPANELAGVTAMKSIDGIKSIRDAEAWLRD SVGLTRAEAQAFIARVKSAGRSESGSGDIDALAQRITSFAANLRNA >gi|333596725|gb|GL892087.1| GENE 551 618545 - 619816 874 423 aa, chain - ## HITS:1 COG:mlr8522 KEGG:ns NR:ns ## COG: mlr8522 COG4695 # Protein_GI_number: 13477030 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Mesorhizobium loti # 15 398 4 388 410 193 31.0 5e-49 MADTDYSIDLRTRSPFWARMASILTGGRLVSPDNGSQMAGTSAHGTVGESVVSDERNMSI STVWACIRLISTVTASLPLDVFETIDDQRKKVDNTNPLAKLLRFRPNNFMTALEFREAMT MQLCAYGNAYAHLERNSVGDVISMLPLLSANMDVRLDGRNVIYRYRRDSEYVDFKPKEIF HLKGFGFNGLVGLSPLAFSAKSAGVAIAMEDNQREFFANGAKSPQILMTDGKVLTKEQRG QLEENFKEIAGGPVRKRLWILESGFTTQPIGISPQDAQMLEARKFQVAELARFYGVPPHL VGDVEKTTSWGSGIEQQNLGFLQYTLKPYLDRWEYSIERWLVKESDQGRLHAEHNLDGLL RGDSASRAAFMQTMVNTGIRTVNEVRRLDNLPPLPGGDVATRQSQNVPITDLGTNKEPRT DGA >gi|333596725|gb|GL892087.1| GENE 552 619819 - 621351 1261 510 aa, chain - ## HITS:1 COG:ECs1598 KEGG:ns NR:ns ## COG: ECs1598 COG4626 # Protein_GI_number: 15830852 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 # 24 502 59 541 553 148 28.0 2e-35 MAKKTLTRAERNILWCERNIVIPEGKFVGQPLKMAEFMKDDFRAIFDNKHGTRRAIISRG RKNAKTVETAMLMLLYLVGPEAAPNSQLYSAARSRDQAAILFNLASKMCRMNPVLMQYVA IKDSAKEIHCPELGSYYRALSAEATTAYGFSPRFVAHDELGQVRGPRDPLYEALETATAA QDNPISVIISTQAPDASDLLSLLIDDGLTGADPRTVVRLQTAPEDIDPFSVEAIRLANPA FDVFMNQKEVLDMAASAKRLPSRQAEFENLVLNRRVEAKSPFVSQTVWHMNKEEPGELAG ATVWGGLDLSSVSDLTALILNTTHGDVHCKFWLPEEGLADKARNDRVPYDIWARQGWLNT TPGKAIEYAFIARELRRVFDICNVRVLAFDRYNMRFLRPHLIDAGFTEAELERFVEFGQG FVSMSPALRELEARLLGAQLKHGNHPILEMCAKNATVITDPAGNRKFVKGKSSGRIDGMV ALAMSIGAQSSDDVEDPGDVNDFIYNFLSV >gi|333596725|gb|GL892087.1| GENE 553 621361 - 621795 248 144 aa, chain - ## HITS:1 COG:no KEGG:Aave_1767 NR:ns ## KEGG: Aave_1767 # Name: not_defined # Def: hypothetical protein # Organism: A.avenae # Pathway: not_defined # 1 143 1 145 151 170 66.0 2e-41 MAQRGRKSLAATSAVSLPALAESRLQPSIHLSDPEINVWVRLVNDNPASSFTETHRDMLE MYCRHVVQARLLTTQIEEFELEWLSREDGLKRYDKLLTMREREVRSASSLATRLRITRQA TADPKTVGRANNNLPRERKPWEIE >gi|333596725|gb|GL892087.1| GENE 554 621920 - 622129 217 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQDLKIEYRDGRLTELSIDGVKFNGVTAISFTHEVGETLPTVSLSIPIGVGDSLVPPGMS RENLRIIEK >gi|333596725|gb|GL892087.1| GENE 555 622142 - 622432 177 96 aa, chain - ## HITS:1 COG:RSc1680 KEGG:ns NR:ns ## COG: RSc1680 COG1403 # Protein_GI_number: 17546399 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Ralstonia solanacearum # 15 83 51 118 124 58 44.0 2e-09 MASNSPWHNLYNTKRWYRLRHHQLQQQPLCEFHLKRNQIVSAAVVDHVKPHKGDETLFHD PENLQSLCKRCHDSVKQRMENGGTVTEFDEEGRVIW >gi|333596725|gb|GL892087.1| GENE 556 622444 - 623280 624 278 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKHLSLQQAMLGLRIVQTDHGMIIKSPAGSAEYDLKGRRTKVSGYPEYFPGQLRVKDMRT KTRGRVEMSGGELTAYGEDGSVRMRVGRINPPAEQKLVDEILKSLPDTSAFRDLLDETYN YGQLGTVTINTANFIHNYLGESDPRLMSGPDSDESAKAAWSIKGHTDDAGVVHVAGMGVA VEDGQQQVEFKADRFAVIGAALSTIKSALHAAEVKTRLSDDMREAVIDAIRESDVFKALQ ASQDAQASALVTTQQAIEQAASDAIRNALKPGGLLYRP >gi|333596725|gb|GL892087.1| GENE 557 623543 - 624007 146 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|330958084|gb|EGH58344.1| ## NR: gi|330958084|gb|EGH58344.1| hypothetical protein PMA4326_05835 [Pseudomonas syringae pv. maculicola str. ES4326] # 5 150 12 155 158 63 33.0 4e-09 MITKVKIKFISPIDGSVSDTPTEHAIPVVPLTVWPSSSKDINVYNPNGLKAGAYALIDTG ADLCYVDSDFADNLKLPIAEKTTVSGATSTIETTVRHAVISFTEDERVFSTELTSVPLVS NGRKFQVVFGMQLIKMGALTMDFSNQVFELTFFN >gi|333596725|gb|GL892087.1| GENE 558 624289 - 624975 644 228 aa, chain - ## HITS:1 COG:SP1134 KEGG:ns NR:ns ## COG: SP1134 COG3646 # Protein_GI_number: 15901000 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pneumoniae TIGR4 # 13 207 14 198 205 74 30.0 2e-13 MQLVEIKKLDLVTNSAVIASGVMKDHKPVIQLIRKYKSDLEEFGRVEFEMRPFQTDGGMQ KQEIALLNEQQTTLLITYMRNNEVVREFKKRLVYEFFTMRSALAKKKMDRNSARLEYKPM TDAIKHEREAQGKQIAPHHFSNEADLINRLALGMTAAKFRVHHEIGKKEPIRDYLTPEQI HCITELQRANTVFISMGWDFEQRKEVLRGMFERNHRQPLIEEQHRLAA >gi|333596725|gb|GL892087.1| GENE 559 625173 - 625478 252 101 aa, chain - ## HITS:1 COG:no KEGG:ECL_03207 NR:ns ## KEGG: ECL_03207 # Name: not_defined # Def: bacteriophage lysis protein # Organism: E.cloacae # Pathway: not_defined # 1 100 54 153 154 167 95.0 1e-40 MQTRQRDAAALDAKYTKELSDAKKTINDLRRDVDSGAKRLRIAATCPGVPKATSSTGVDD AGAPELTPDARRNYFDHRDGIATADKMIRGMQDYIKEQCLK >gi|333596725|gb|GL892087.1| GENE 560 626857 - 627639 424 260 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A0683 NR:ns ## KEGG: SeSA_A0683 # Name: not_defined # Def: GP23 # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 260 1 260 267 390 71.0 1e-107 MELEASLKHFSPQGMHISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKSGISK TDEQLAVQALARYAIEKAPKNIRKVVGAQLGSCMLVLAQFAFADYSRSAATSVTCHSCCG TGFISGHEDVIKHPGIFDADGAEVVAPKIKNELVKRVCETCGGKKVILARCRCGGKGEVL DRKATKERGAPVFKTCERCSGNGFSAISSATVHRAILKRLPDLHQSSWSRNWKPFYEMLV DTLRQGERHAAVEFEKATTY >gi|333596725|gb|GL892087.1| GENE 561 627643 - 629514 1048 623 aa, chain - ## HITS:1 COG:no KEGG:XNC1_3413 NR:ns ## KEGG: XNC1_3413 # Name: not_defined # Def: hypothetical protein # Organism: X.nematophila # Pathway: not_defined # 1 622 1 627 631 791 59.0 0 MSPAELSEKLWDNAERVAKFLLPKGHLEGKEWCAGNTNGDSGKSLKVNIGGKKSWADFAS GDSGDLLDLWVLVRNCQLHDAMREAKEFLGLKDDDHHFEAKKKTFSRPTKKGVKSASKCY DYLASRGITRETADRFKVTDAVVWYHDESREVPAVAFPYIRNGELLQVKRIGTERPNGKK LIMAEADCEPCLFGWQALDKNTRLVVLCEGEIDCMTFTQLGYDALSVPFGGGKGAKQQWI EYEYHNLDRFQEIWLCLDNDNVGREAAKEIARRLGEHRCRMVELPHKDINDCLMNGMDSD SILEYMERAKFFDPDELCSAGDLLQETIEAFEHRDTGLFTSPWASLNNNFKFRAGELTLV NGVNGHGKTELVGHIAIDAMSQGVRTCIASLELKPGKMLARLTRQTICTSSPKREEIIMT NEWFSDRLWVFKLTGTAKADRLLEIFAYARRRYGIELFVIDNLAKCGLDEEDYTGQKDFI DTLCDFKNEHNCHVLLVTHARKTNDSAPTGKMDVKGTGALTDMPDNVMAVWRNIPRELAQ RKADRMGYESLDKDEQAAINLPASMIRLLKQREGEGWIGDIGANFDSRSHQFLEGEKKPF NYLVGKPQSELDLEWEASNVTRV >gi|333596725|gb|GL892087.1| GENE 562 629622 - 630605 414 327 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2104 NR:ns ## KEGG: ECO103_2104 # Name: not_defined # Def: putative replication protein O # Organism: E.coli_O103_H2 # Pathway: not_defined # 19 279 4 266 297 198 42.0 3e-49 MHAACLEVSKLFQEGCGVSNFLQLVDRPIAFQRSFVRLGVGITGALLLSQIVYWQNRMEG NWFYKTQTDLEEETGLTRYEQEGARKKLVSCGVLEEAKRGIPAKLYFRVNQERLEELLLG ENQHAGMGKTNKQGCGISANSDAENQHAGMGKTNEQSCGNSASIHTVDYQETTQKINTEN KYLGASAEADTPKVKSSTDYSPAFEEAWQAYPKRSGGNNKLSAFKAWNARIKQGVKPETM LEGVKRYAAFMASEGKIGTSFVKQAATFFGPDKHFDEPWLVDTQENKVPTRQDQSRYEWY AKSDDGSAEVFINQSAIDRMNRGGYRP >gi|333596725|gb|GL892087.1| GENE 563 630551 - 630748 129 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300918424|ref|ZP_07135022.1| ## NR: gi|300918424|ref|ZP_07135022.1| conserved hypothetical protein [Escherichia coli MS 115-1] conserved hypothetical protein [Escherichia coli MS 115-1] # 1 65 1 65 65 121 98.0 2e-26 MSHPITTENQVKPLDIDYRDPRGVIVHVTGWNRDKQQVYFTRQNYPHECMQPVWKFQNYF RRVVE >gi|333596725|gb|GL892087.1| GENE 564 630750 - 630980 98 76 aa, chain - ## HITS:1 COG:no KEGG:ECO26_1585 NR:ns ## KEGG: ECO26_1585 # Name: not_defined # Def: putative antirepressor protein Cro # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 69 1 69 77 77 56.0 3e-13 MENELLSWRRASTKEEWHALAVKSGTSIGYLNLIAYGYRNASPKLATSIEAASRTFVGKK PLKREMLVFPHPGNEV >gi|333596725|gb|GL892087.1| GENE 565 631096 - 631815 361 239 aa, chain + ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 57 228 50 220 231 120 36.0 3e-27 MDIKNIRRQNLNRLIGEYIVEGYTKAQIAEKIGIPPSQLSQLSGSNASRNIGDIIARRIE SSMGLPHGWMDSKRADVDASGTKPNFFINPLTKNQQQYRIEVLDTEFSCGSGRMNMDYPE IVKSIELDPEEAKRMFGGRSPTSLKICTVVGDSMLGTIFPGDLVVIDVTVNRLIGDGIYA FVYGDNFHIKRLQLLKDKLVVISDNSTYEKWFVSETDQSEFHIQGLVVGRWQMSYNRLG >gi|333596725|gb|GL892087.1| GENE 566 631991 - 632422 146 143 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTQITVAKTIGKRILNQRSSLRLSQDFLADHLGLTTETINNWETEKTVPFADQLIQLAN ILHSDVLWLISGNEQCGEFTEPTSIITSNQLNSWSADIGNCRMALSNAMDCMPPELSAIG TLTIVYEKLDDLQETICKQADKI >gi|333596725|gb|GL892087.1| GENE 567 632489 - 632875 123 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|206601813|gb|EDZ38296.1| ## NR: gi|206601813|gb|EDZ38296.1| putative phage repressor [Leptospirillum sp. Group II '5-way CG'] # 4 127 106 224 224 63 31.0 4e-09 MQNSVAVNQPVKTPQMLFGSDNINDFGNRVQSCRMEGDSMQPTIEPCEVVAFVDCGGRAL TSGIYVYTMDAFGRPCLFIKRIEPLADGSLKIISDNHHYETFTLNTDEQKEIKIHGRVVA SLAVRRFV >gi|333596725|gb|GL892087.1| GENE 568 632982 - 633206 93 74 aa, chain + ## HITS:1 COG:no KEGG:ECL_02714 NR:ns ## KEGG: ECL_02714 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 74 1 74 74 129 100.0 4e-29 MSLLKRQDIQVVNIKAEQLAGLSQTLFEYHDKLDHFQLKTICSLVYDIAGEIHDWTEKEE EIVMSLEEEARRNG >gi|333596725|gb|GL892087.1| GENE 569 633199 - 633606 163 135 aa, chain + ## HITS:1 COG:no KEGG:ECL_02715 NR:ns ## KEGG: ECL_02715 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 135 1 135 135 233 97.0 3e-60 MDKLIETYRRRILKAALLRHQRKTGSNCLVIKLNKGGINTVELTEILLDGLLRKFERLAI SEYGNVEGVKAIKGIYSSAVDVNGSGEFLTDSGKELIDELISELVEFVKKQKVEAPKTEG HEMEGSDGSYSDTNS >gi|333596725|gb|GL892087.1| GENE 570 633578 - 633796 138 72 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2117 NR:ns ## KEGG: ECO103_2117 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 69 1 69 72 79 65.0 3e-14 MALTAIRIPEWVHLKAAHVLSQFRARRIHPCRMIGTGNLSLKVNHRWRLLSRDGGKNWEV MSHETYNREKDR >gi|333596725|gb|GL892087.1| GENE 571 633793 - 634299 476 168 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_3983 NR:ns ## KEGG: XBJ1_3983 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 18 150 13 148 163 79 33.0 4e-14 MTDFEKDNVKQLVARLKEIQKQSDVTIPGWMLDENRYGKGSLTLEEQHEWAQTVVQSMRG TVALLYLISCENRWGLRDGQYQFKTEEFTFGLTRELIENLLIKHVECALIEHKPEERYLA VYQFYYANDQRLKEVGHSWFAEFLDEIFVDLAAQLRTGKTMPANHVLH >gi|333596725|gb|GL892087.1| GENE 572 634312 - 635172 765 286 aa, chain + ## HITS:1 COG:no KEGG:HDEF_0921 NR:ns ## KEGG: HDEF_0921 # Name: not_defined # Def: hypothetical protein # Organism: H.defensa # Pathway: not_defined # 3 278 1 279 284 192 38.0 2e-47 MAMKAELAPVAARDLQIIEYRGQRVVTTEQLAAGYGATEQMITNNFNRNKSRFVEGKHYF KLSGGDVEILRNSFSGLQISSKARTLTLWTERGAANHAKILETDQSWEFYDDMAEFYFTR RASIATPATPLTLSRKELALMVIEAEERAEAAALETRTLSATVESLEKHFTKGMTIPAFS KALNGVNINKMMWWASERGWVFNEQRDPEKDPRWRVASYARDKYLTEDQTQITPHGKDAF TKFTPVLLEKGCHRLYQLYMKGELPMKKTWNGEYSHDKAIYSPEAK >gi|333596725|gb|GL892087.1| GENE 573 635629 - 635844 154 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262043824|ref|ZP_06016915.1| ## NR: gi|262043824|ref|ZP_06016915.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] # 1 64 70 133 145 112 78.0 9e-24 MERRRAHYIRMLDLIKYMHRSNADFVDWGTVPALNPRGIRWMNACFSRLGEMVNSFGGWN NVVANADSEVK >gi|333596725|gb|GL892087.1| GENE 574 635844 - 636197 225 117 aa, chain + ## HITS:1 COG:no KEGG:ECL_02719 NR:ns ## KEGG: ECL_02719 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 113 6 121 128 100 50.0 1e-20 MDRAMIKTDSLNTIGECLEQLALAEEGLIVIDGQLLKHDADQAWRKRAENARRTIGQKKR IITARLSVLRHQEKEHNRQMHHTRDSYLIAELREIVTPSSFLRCVHRAETKLEAASE >gi|333596725|gb|GL892087.1| GENE 575 636190 - 636522 115 110 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_3990 NR:ns ## KEGG: XBJ1_3990 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 4 105 3 102 105 62 36.0 8e-09 MSESNLFELVALIKAAKSDPSAIVDALWEAGYRQPERSEKEAAKITIDTFFYCMAFDMPT DFWPRDYDSVLQNELMKAVIGEDGELAYATASEIAKSVINAGFSKEAANG >gi|333596725|gb|GL892087.1| GENE 576 636585 - 636821 125 78 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2126 NR:ns ## KEGG: ECO103_2126 # Name: not_defined # Def: putative excisionase # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 78 1 78 78 142 85.0 6e-33 MSDVVLLVPNDWVSEKVLIAVTGLKPGTILRARKECWLVGREYVHVSPDGNPKPSSECMY NRKAVDAWVASMKNKQPG >gi|333596725|gb|GL892087.1| GENE 577 636877 - 638190 280 437 aa, chain + ## HITS:1 COG:ECs3013 KEGG:ns NR:ns ## COG: ECs3013 COG0582 # Protein_GI_number: 15832267 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 423 1 424 428 664 71.0 0 MDKVTYPTGVENHGGTLRIWFNFKGKRVRENLGVPDTAKNRKIAGELRTSVCFAIRTGTF EYASQFPDSPNLKTFGVGKKEITVSELAEKWLDLKRMEICANALNRYESVARNMVPRIGG NRLVSAVTKEELLYIRKDLLTGHQMPMKGKVPAKGRSVVTVNYYMTTIAGMFQFATDHGY LEANPFDGIKPLKKARAEPDPLTRDEFIRLIDACRHQQTKNLWSLAVYTGVRHGELTSLA WEDIDLEAGTITIRRNYTKLGEFTLPKTEASTNRVIHLIQPAISVLRNQAEMTRLGKKHQ IDVQLREYGRTESHECTFVFNPQLVRRCQQVGIIYKVDSIGDLWDAAMKRAGIKHRKAYQ SRHTYACWSLSAGANPSFIASQMGHASAQMVFNVYGAWMADSSSEQIAMLNQRLADFAPQ MPQSIHSSARVLLKSVS >gi|333596725|gb|GL892087.1| GENE 578 638385 - 638942 470 185 aa, chain + ## HITS:1 COG:yecE KEGG:ns NR:ns ## COG: yecE COG1801 # Protein_GI_number: 16129821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 185 88 272 272 290 75.0 1e-78 MSPLANRIGQYWLQLPATFGPRDLPALWQFLDALPRGFTYGVEVRHPEFFAKGDAEKALN RGLHERSVNRVILDSRPVHSAIPHSEAVVDAQRKKPKVPVHAIVTAQNPMVRFIGSDNML QNEEMFAVWLQTLAKWEHTTTPYLFLHTPDIAQAPELVDALWQALQQAVPSVGPAPSIPQ QSSLF >gi|333596725|gb|GL892087.1| GENE 579 638994 - 639389 383 131 aa, chain + ## HITS:1 COG:ECs2579 KEGG:ns NR:ns ## COG: ECs2579 COG3788 # Protein_GI_number: 15831833 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Escherichia coli O157:H7 # 1 130 11 140 141 211 87.0 3e-55 MVSALYAVLGALLLIKFSFDVVRLRMQYRVSYGDGGFSELQSAIRIHGNAVEYIPVALIL LLLMEMDGAETWMVHVCGLLLIAGRLMHYYGFHHRLIRWRRSGMSATWCSLLLMVLANLW YMPWELVFSFH >gi|333596725|gb|GL892087.1| GENE 580 639430 - 640173 873 247 aa, chain + ## HITS:1 COG:yecO KEGG:ns NR:ns ## COG: yecO COG0500 # Protein_GI_number: 16129823 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 247 1 247 247 480 91.0 1e-135 MSDRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQV YDLGCSLGAATLSIRRNVHHEGCKIVAVDNSPAMVERCRRHIDAYKAPTPVEVVEGDIRD IDIQNASMVVLNFTLQFLVPDDRQRLLDKIYQGLNPGGALVLSEKFSFEDASVGELLFNM HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRNAGFEHSELWFQCFNFGSLVA LKGGDAA >gi|333596725|gb|GL892087.1| GENE 581 640170 - 641141 1270 323 aa, chain + ## HITS:1 COG:ECs2581 KEGG:ns NR:ns ## COG: ECs2581 COG0500 # Protein_GI_number: 15831835 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 607 89.0 1e-174 MIEFGNFYQLIAKNHLSHWLETLPAQIATWQRDQQHGLLKQWSNAVEFLPELTPHRLDLL HSVTAESEEPLPAGQINRIETLMRNLMPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSD LTGRTILDVGCGSGYHMWRMIGAGAHLVVGIDPMQLFLCQFEAVRKLLGNDQRAHLLPLG IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPG DRYAQMRNVYFIPSALALKNWLEKCGFVDVRIADVCVTSIEEQRRTDWMITESLEQFLDP DDHSKTIEGYPAPMRVVLIATKP >gi|333596725|gb|GL892087.1| GENE 582 641420 - 642163 442 247 aa, chain - ## HITS:1 COG:cutCm KEGG:ns NR:ns ## COG: cutCm COG3142 # Protein_GI_number: 16132223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli K12 # 1 246 1 246 248 362 72.0 1e-100 MALLEICCYSVECAVTAQRQGADRIELCAAPKEGGLTPSFGVLKSARQAVTIPVHPIIRP RGGDFCYTAAEFSAMLEDIALVRDSGFPGLVIGVLDEDGNIDIPRMRQIMRAAQGMAVTF HRAFDMCQDPIQAFDTLAELGVARVLTSGQQSSAEKGLKLITELKAHSGVPIIMAGAGVR ASNLELFLNAGVEELHSSAGKWIPSPMRYRNTGLSMSTDAEADEYSRYGVDGESVAVMKS LIERHHV >gi|333596725|gb|GL892087.1| GENE 583 642242 - 642802 521 186 aa, chain - ## HITS:1 COG:STM1908 KEGG:ns NR:ns ## COG: STM1908 COG3102 # Protein_GI_number: 16765250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 185 1 185 189 330 87.0 8e-91 MANWHSIDELHDISADLPRFTQAFTELATRLGLEIAPLDADHISLRCHQNATAERWRRGF EQCGELLSENIINGRPICLFKLHEPVTVAHWQFTVVELPWPGEKRYPHEGWEHIEIVLPG EPETLNARALALLSDEGLSQPGIFVKTSSPKGARERLPNPTLAVTDGNVTVKFHPWTIEQ IVASEA >gi|333596725|gb|GL892087.1| GENE 584 643042 - 644775 2339 577 aa, chain + ## HITS:1 COG:STM1909 KEGG:ns NR:ns ## COG: STM1909 COG0018 # Protein_GI_number: 16765251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 1085 92.0 0 MNIQALLSEKVSQALIAAGAPADCEPQVRQSAKVQFGDYQANGVMAVAKKLGMPPRQLAE QVLTHLDLTGIASKTEIAGPGFINIFLEPAFLASHVDAALKSDRLGVAQPAAQTVVVDYS APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAYLEKQQQEN AGEMALADLEGFYREAKKHYDEDEAFAERARSYVVKLQGGDPYFLEMWRKLVDITMSQNQ LTYNRLNVTLTRDDVMGESLYNPMLPGIVADLKAKNLAVESEGATVVFLDEYKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPD SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLSDLLDEALERARRLVAEKNPDMPADELEKL ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKANIDESV LANATVTLTEDREAQLAARLLQFEETLFVVARDGTPHVMCAYLYDLAGLFSGFYEHCPIL SAESEAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM >gi|333596725|gb|GL892087.1| GENE 585 644807 - 645946 1354 379 aa, chain - ## HITS:1 COG:STM1911 KEGG:ns NR:ns ## COG: STM1911 COG4225 # Protein_GI_number: 16765253 # Func_class: R General function prediction only # Function: Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 704 89.0 0 MKVWPVKHSPLLRQPERFIARDELKSLIQKVTHNLVNIHDKTGEFLLRLDDGRVIDTKGW AGWEWTHGVGLYGIWQYYCQTGDEGMREIIDSWFADRFAEGATTKNVNTMSPFLTLAYRY EETKNPAWLPWLESWAEWAMNEMPRTEHGGMQHITLAEENHQQMWDDTLMMTVLPLAKIG KLLNKPEYVEEAIYQFLLHVQNLMDRETGLWFHGWNYEGNHNFANARWARGNSWLTIVIP DFLELVDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPDSYLEASATAGFAY GILKAVRKRYVGAEYAAVAEKAIRGIVQNISPEGELLQTSFGTGMGSDLAFYRQIPLTSM PYGQAMAILCLTEYLRKYF >gi|333596725|gb|GL892087.1| GENE 586 645951 - 647534 1926 527 aa, chain - ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 12 502 1 483 498 390 41.0 1e-108 MKTRKIGLANYLAYGSGDFLGAGTTALTAAWLLYFYTTFCGLTPIEATFIFAAARVLDAV VSPLMGFLTDNFGTTWLGKRFGRRKFFILLGIPCVFSYSLMWVGDMSFWYYLLTYLIFDI VYTMILVPYETLVPEMTDDFKQKTKFSGARISMAQMSAILASFLPGILLTHFGKDNAISF FYASLVFSVLCALMLTFVWFFTWERPREEWSEAALLAEEEKKKLTLGQSLNRLFVELSST LRIKIFRQHLGMYLGGYIAQDVFNAVFTYYVVFVLMQEASMASNLLGTMAIFQFLAVIGM IPLCIRFGPAPSYRMVVVLFGLASLSYAVLYYAGLSDVYALLLLISAVAGLGRGGINYVP WNTYTYIADVDEVITGQRREGIFAGIMTLTRKASQAGAVMLVGIVMQMSGFVSGQKVQPA EVSHTILMILSVGTILVLFCGFLVSLRFKLNLQTHSTLREETAKMRESGHAMPEAATPQA RATVEMLAGMPYESLWGNNNIGYLNRNKPAAPSLKDRAVLNSTYNRG >gi|333596725|gb|GL892087.1| GENE 587 647796 - 648188 398 130 aa, chain - ## HITS:1 COG:no KEGG:ROD_19231 NR:ns ## KEGG: ROD_19231 # Name: flhE # Def: flagellar protein FlhE # Organism: C.rodentium # Pathway: not_defined # 1 130 1 130 130 206 80.0 3e-52 MRKWLWILLFPLVAQAAGEGAWQASSIGLTLNHRGEAISSRPLSAAEPVSGLMTLVAWHY TLTGPTPAGLRVRLCSLTRCAEIEGQSGTTQAFNGVSAQEPLRFIWEVPGGGRLIPALKV QRNEVLVNYR >gi|333596725|gb|GL892087.1| GENE 588 648188 - 650266 2669 692 aa, chain - ## HITS:1 COG:flhA KEGG:ns NR:ns ## COG: flhA COG1298 # Protein_GI_number: 16129831 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli K12 # 1 692 1 692 692 1192 94.0 0 MANLVAMLRLPGNLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLL VAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVG GNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIAEDE AKKRRAEVTQEADFYGSMDGASKFVRGDAIAGILIMVINVIGGLLVGVLQHGMDMGHAAE SYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVGQLFSNPRVMLLSAAVLG LLGMVPGMPNLVFLLFTAALLGLAWWMRGRETQPKAEPAPVKMPENTQAVEATWNDVQLE DSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQDMGFLPPVVHIRDNMDLPPARYRI LMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEQTTDPAFGLAAIWIESALKEQAQIQGYT VVEASTVVATHLNHLIGQFSAELFGRQEAQQLLDRVTQEMPKLTEDLVPGVLTLTTLHKV LQNLLDEKVPIRDMRTILETLAEHAPLQSDPHELTAVVRVALGRAITQQWFPGTGEVQVI GLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALARQEMLGAPPVLLVNHALRPLLSR FLRRSLNQLVVLSNMELSDNRNIRMTATIGGK >gi|333596725|gb|GL892087.1| GENE 589 650259 - 651407 956 382 aa, chain - ## HITS:1 COG:STM1914 KEGG:ns NR:ns ## COG: STM1914 COG1377 # Protein_GI_number: 16765256 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Salmonella typhimurium LT2 # 1 382 1 383 383 645 85.0 0 MAEENDDKTEAPTPHRLEKAREDGQIPRSRELTSLLILVVGVCIIWWGGEMLARRLAGML SAGLRFDHSMVNDPNLILIQIINLVKSAMIALLPLIAGVVIVALVSPVMLGGLVFSGKSL QPKFSKLNPFPGIAKMFSAQTGAELLKAILKSLLMGSTAGFFLWHHWPEMMRLISESPMT AMKNALNLVGLCSLLVVLSIIPMVAFDVIFQIYSHIKKLRMSRQDIRDEYKQMEGDPHVK GRIRQMQRAAARRRMMEDVPKADVIVTNPTHYSVALQYDENKMSAPKVVAKGAGLIALRI REIATENRVPILEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP VKPENLPVPEALDFLNEKDTDG >gi|333596725|gb|GL892087.1| GENE 590 651558 - 652202 961 214 aa, chain - ## HITS:1 COG:STM1915 KEGG:ns NR:ns ## COG: STM1915 COG3143 # Protein_GI_number: 16765257 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 214 1 214 214 327 92.0 8e-90 MMQPAMKPVEEHSPSDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLDYVVQ MTAQAAERALNSVEASQPHQDAMEKGAKALSKRWDEWFENPIELADARELVTDTRQYLGD VPGHTSFTNAQLLDIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEPAARPKR ENESLLNGPQLDTSKAGVVASQDQVDDLLDSLGF >gi|333596725|gb|GL892087.1| GENE 591 652213 - 652602 636 129 aa, chain - ## HITS:1 COG:STM1916 KEGG:ns NR:ns ## COG: STM1916 COG0784 # Protein_GI_number: 16765258 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 129 1 129 129 225 95.0 2e-59 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNM PNMDGLELLKTIRADAGMASLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL GKIFEKLGM >gi|333596725|gb|GL892087.1| GENE 592 652620 - 653669 991 349 aa, chain - ## HITS:1 COG:cheB KEGG:ns NR:ns ## COG: cheB COG2201 # Protein_GI_number: 16129835 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Escherichia coli K12 # 1 349 1 349 349 624 93.0 1e-179 MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKYNPDVLTLDVEMP RMDGIDFLEKLMRLRPMPVVMVSSLTGKGSEITLRALELGAVDFVTKPQLGIREGMLAYS EMIAEKVRTASRAKLAAHKPMAAPATLKAGPLLSSEKLLVIGASTGGTEAIRHVLQPLPL SSPGILITQHMPPGFTRSFAERLNKLCQISVKEAEDGERVLPGHAYIAPGDKHMELSRSG ANYQIKIHDGPPVNRHRPSVDVLFHSVAKHAGRNAVGVILTGMGNDGAAGMLAMHQAGAW TIAQNEASCVVFGMPREAINMGGVSEVVDLSQVSQQMLAKISAGQAIRI >gi|333596725|gb|GL892087.1| GENE 593 653666 - 654487 927 273 aa, chain - ## HITS:1 COG:STM1918 KEGG:ns NR:ns ## COG: STM1918 COG1352 # Protein_GI_number: 16765260 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Salmonella typhimurium LT2 # 1 273 16 288 288 522 93.0 1e-148 MTQRLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRTLGLDDFGRYLSMLEA NQNSAEWQAFINSLTTNLTAFFREAHHFPVLAEHARRRSGEYRVWSAAASTGEEPYSLAI TLADTLGMAPGRWKVYASDIDTEVLEKARNGVYRQDELKTLSPQQLQRYFMRGTGPHEGL VRVRQELANCVEFAPVNLLDKQYNVPGPFDAIFCRNVMIYFDKTTQQDILRRFVPQLKPD GLLFAGHSENFSNLVREFSLRGQTVYALSKEKA >gi|333596725|gb|GL892087.1| GENE 594 654552 - 656153 1561 533 aa, chain - ## HITS:1 COG:tap KEGG:ns NR:ns ## COG: tap COG0840 # Protein_GI_number: 16129837 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 533 1 533 533 631 73.0 0 MLNRIRISTTLFLILILCGVLQVGSNGLSFWAFRDGYQNLQEVETSNQQRSTLAQTRAVL LQASTALNKAGTLTALSYPPDDIKALMVVARSSLKQADAQFKAFTAQEAVSEKQKALNVA MKKNFDAWYSDLDHQATWLENNQLSDFLTAPVQASQAAFDGSFNAWQQDINQFVARAGAD SRTSYRMSGVIFLTMVILAALLTGGSLWWSRKMIVQPLAIVSSHFDSIAKGNLARPVAVY GRNEISAIFASLKAMQGSLRETVSNVRQGSYAMHTGISEIAAGNNDLSSRTEQQAASLAQ TAASMEQLTATVSQNADNARQASDLSKQAAMTAKRGGDQASHVASTMQEIAASSQKIGDI ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSANAAKEIKGLIEES VSRVQQGSALVDTAAQTMHEIVTSVTRVNDIMGEIASASDEQRRGIDQVAQAVTQMDQVT QQNASLVEEAAAATDQLANQADHLTGLVAVFNVKEHVEAVTEVGRSQAVPVVS >gi|333596725|gb|GL892087.1| GENE 595 656198 - 657865 1652 555 aa, chain - ## HITS:1 COG:STM1919 KEGG:ns NR:ns ## COG: STM1919 COG0840 # Protein_GI_number: 16765261 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 555 1 553 553 676 78.0 0 MLNRIRVVTMLMMVLVIFALLQLISGGLFFSSLKQNQDSFAASNDLRMQQSELTTTWDLM LQTRINLSRSSARMMMDPNNQQSSAKTELLKNARATLADAAKHYDAFKKIAPQPAMAQAS ANIDEKYQAYFAGLTELVQFLENGNMDAYFAQPTQGMQNALGAALGEYAKASGELYHSAF TQSQNDYRFAKWQMAVLALALVIVLVAVWYGIRHILLNPLGRVIAHIRDIGRGDLTKTLN VSGRNEITELATSVDHMQRSLIDTVANVREGADAIYTGTSEIAMGNNDLSSRTEQQASAL EETAASMEQLTATVKQNADNARQASQLAESASDTAQRGGRVVDGVVKTMHDIADSSKKIA DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSANAAKEIKALIE DSVSRVDTGSVLVESAGETMNDIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR VTQQNAALVQESAAAAAALEDQASRLKMAVSAFRLTSKTTNTVSSRSAYSEVTPAPVATR TRAAVTGQDENWETF >gi|333596725|gb|GL892087.1| GENE 596 657951 - 658670 669 239 aa, chain - ## HITS:1 COG:PA4653 KEGG:ns NR:ns ## COG: PA4653 COG5430 # Protein_GI_number: 15599848 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Pseudomonas aeruginosa # 3 239 87 315 315 113 34.0 4e-25 MKRTDNAAITDVIPTRLCGASGCGGNSEVQISKAYTWSGNTLLGLLGSRRYNIPLYFRTV MGQNVTAGPYQVLLTFSINYNVCAIGAVGACLTPQTGTATTSILLNMTVTNDCSTMTTPD VNFNSAPLVQNFPTVSQSVAVTCTKGSTYTIGINNGANALNNVRRMVSGSNFMSYDIYKE ATSNRWGGSGSERWASASSSQVSTDGLLRTYNYTAKVLTSQATPPAGTYTDTLIVDVAF >gi|333596725|gb|GL892087.1| GENE 597 658753 - 661284 2292 843 aa, chain - ## HITS:1 COG:PA4652 KEGG:ns NR:ns ## COG: PA4652 COG3188 # Protein_GI_number: 15599847 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Pseudomonas aeruginosa # 31 790 34 782 790 557 41.0 1e-158 MAIDARQLKPAMMILLCVSTSAFAETGDDSLPPPPDARTMNGEAVFQLALVLNHYDTGLV VPVTQREGAWFISGADLLRAGLPPAHVPAGEVNLSTLSSVRAEYDSSAQRLLLTVPRDWV AARVTPFSEQSAQSKPHYGRGALLNYDVYTNHSEHTGGQASVWHEFRYFNEDYSFSSTGY ARQNFTGSSGQQEGYVRYDSTFLITNEEDATTWTAGDVISDALSWSTSVRMGGISYGRDF SLRPDLVTWPLPAFSGEAAVPTSVDLFINGYRSGSTRLQPGPFTLTNLPYINGAGDAVLV TTDALGRQVSTTLPFYVTSDLLKQGLSDGAVTLGSLRRNYGIENFDYGPAAGSGSYRYGV TDWLTLEGHAEGAESLALGGAGTVLKLGRFGVVNTSWTQSRMRGDSGGQTNWGYQYNTSE FSVATQHTRRDRGFGNLALYDQPTVYDENDNPVASLSRNTDQYSLTFNLGEYGNIGAAWI GVESFDSQKTELLNLSWSRNLWGSSSIYLAASRDQQRGDWTVALSLQVPLGERDSAAVTF ENTPDAGSTQRINYNHSMPSDGGFSWNMAWANQSRSSDYQQATLGWRNNNVELQGGGYGE KGMMTWWGEAMGSVVLMDGELFAANKINDAFVVISTDGHPDVPVSYENQPVGKTNNKGYL LVSGVSAYYPASYRIDTLNLPADTRLKETERRVAIRRHNGYLVDFPMEQERVASVILHDA QGNAIPVGSQVKRASRSSAVVGYDGLAWLENLNDVNPLEVITPEGKRCTATLTVGANPEH KLQTYGPLTCRETPVRCAPAAIFWRQLGGLYRQYGQCLVWQRHLVRAERHRGSGNDGHAG GDL >gi|333596725|gb|GL892087.1| GENE 598 661260 - 662021 685 253 aa, chain - ## HITS:1 COG:PA4651 KEGG:ns NR:ns ## COG: PA4651 COG3121 # Protein_GI_number: 15599846 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Pseudomonas aeruginosa # 22 244 24 252 262 179 43.0 4e-45 MKPFFRRSGLVGLLGAVALATGQAHAAATILLWPIDPWLPAEARATELWIQNQGNSATTM QVRIVRWKQEGGYERYTAQQDVVASPPIVTIAKGSKQLIRLIKQGTIPTGVEQAYRIIVD EIPQPDAKAEPSMGLKLQMRYSIPLFVYGQGIPTLNEGAHHALANTQQLSWRVVQEEGKP ALQVSNQGDVHVRLSQVAVEQGGQKRTVAEGLLGYVLPGSTRSWPLPAGIYQPNRMSAQI NARDTQWQSTPVN >gi|333596725|gb|GL892087.1| GENE 599 662038 - 662586 300 182 aa, chain - ## HITS:1 COG:no KEGG:ECL_01408 NR:ns ## KEGG: ECL_01408 # Name: not_defined # Def: spore coat U domain-containing protein # Organism: E.cloacae # Pathway: not_defined # 16 182 1 167 167 229 80.0 4e-59 MKALCLCLRESAEGVVHPFFALIVGLMMSPGVGAVTSQSFRVSATVVPGCSVSTGTGGRF GMLDFGTRNGVDSTPVSTSFVADGALSIACTPGVALSMTIDGGQNYSSVRRMTRSGGTEV VGYRLYSSSSLAANSEIGVNQAIPITYTNSNNIALPLFGVALLTGFSLPGTYSDQLTVTL SW >gi|333596725|gb|GL892087.1| GENE 600 662594 - 663166 557 190 aa, chain - ## HITS:1 COG:no KEGG:EFER_1135 NR:ns ## KEGG: EFER_1135 # Name: not_defined # Def: type I pilus protein CsuA/B # Organism: E.fergusonii # Pathway: not_defined # 22 190 38 206 206 218 84.0 1e-55 MKRKLLFICAGTLLTAATVGQALAVTSSGTIGATLTLTNGCLINGSPTQNGINFGTLDFG THPATFSTLTTQLTGASGGNTFTIQCTTASYTVAITGNTNATAPGTVVGTPGTPARYLVN TANAAQGVAYSLYSDSGYNNVIANNAALPVASTAGGVNSYTLYGRITGGGNSVTVVPGTY TDTINVSVTY >gi|333596725|gb|GL892087.1| GENE 601 663637 - 664854 1657 405 aa, chain + ## HITS:1 COG:RSc1957 KEGG:ns NR:ns ## COG: RSc1957 COG1301 # Protein_GI_number: 17546676 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Ralstonia solanacearum # 1 401 14 415 428 348 49.0 1e-95 MLAGILSGAAIHEYASSDAIQAWSENITLLTDIFLRLIKMVIAPLVFSTLTVGIMKLGET STIGRVGGKAMVWFISSSVLSILVGLFIVTLEQPGSGLNLSIPTEAVDTGLAVSGMSLKA FLSHTIPTSIAGAMANNEILQIVVFSMFFGIGGASLGQKFNAPLVAALDVVSHIMLKVTG YVMYVAPLAIFAAISSVIATQGLGILLNYASFIGGYYVAILLTCLVLLAVGYMVLKKEIF RLVAMLKDPVLVAFTTSSSEAAYPKTLEQLARFGCSRNIASFVLPIGYSFNLVGSMVYCS FASMFIAQAYNIHLSFTEVTVLMLTLMLASKGIAGVPRSSLVVLAATIPSFNIPVAGILL LMGIDHFLDMGRSAINVLGNGIATAMLSQNEGAREAEAALVGQEA >gi|333596725|gb|GL892087.1| GENE 602 664951 - 665454 707 167 aa, chain - ## HITS:1 COG:STM1920 KEGG:ns NR:ns ## COG: STM1920 COG0835 # Protein_GI_number: 16765262 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 290 95.0 6e-79 MTGMSNVTKLAGEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN LRGVIVPIVDLRVKFSQGDVEYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTADQIRPAP EFAVTLSTEYLTGLGALGERMLILVNIEKLLNSEEMALLDIAANHVA >gi|333596725|gb|GL892087.1| GENE 603 665474 - 667483 2302 669 aa, chain - ## HITS:1 COG:STM1921 KEGG:ns NR:ns ## COG: STM1921 COG0643 # Protein_GI_number: 16765263 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Salmonella typhimurium LT2 # 1 669 3 671 671 1036 86.0 0 MDITDFYQTFFDEADELLADMEQHLLDLVPEAPDSEQLNAIFRAAHSIKGGAGTFGFTIL QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKSSAEPDAASFEYICNA LRQLALEAKGEASAPVVPAAKLSVVDAVAEPDTAPDAPAGKLRVVLSRLKENEVDLLEEE LGNLATLSNVVKGKDSLAATLDDGIGQDDIVAVLCFVIEADQIAFETEAATAEAQAPAPA EKAPAVVPAAPALKAVPKESAAPARGEKPAARSSESTSIRVAVEKVDQLINLVGELVITQ SMLAQRSNELDPVTHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRFPRLVRDLAG KLNKQIELTLMGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPENRVAAGKSPVGNLIL SAEHQGGNICIEVTDDGAGLNRERILAKAISQGMAVNENMTDEEVGMLIFAPGFSTAEQV TDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGAGTTIRILLPLTLAILDGMSVKVADEVFI LPLNAVMESLQPREEDLHPLAGGERVLEVRGEYLPLVELWKVFEVDGAKTEATQGIVVIL QSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQGLNR EQRVANTAA >gi|333596725|gb|GL892087.1| GENE 604 667494 - 668423 906 309 aa, chain - ## HITS:1 COG:STM1922 KEGG:ns NR:ns ## COG: STM1922 COG1360 # Protein_GI_number: 16765264 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Salmonella typhimurium LT2 # 1 309 1 309 309 538 89.0 1e-153 MKNQSHPIVIVKKRKHKGHGHGSHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIA EYFRTPLATAVTGGPRISNSDSPIPGGGDDYTQQQGEVKKQPNIDELKKRMEQARLKKLR GDLDQLIEADPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFKTGSADVEPYMRDILRAI APVLNGIPNRISLSGHTDDFPYATGEKGYSNWELSADRANASRRELVAGGLDDGKVLRVV GMAATMRLTDRGPDDAINRRISLLVLNQQAEQAILHENAESQNESLDDLKQPGAVPSAAV PTSPPANPR >gi|333596725|gb|GL892087.1| GENE 605 668420 - 669250 1103 276 aa, chain - ## HITS:1 COG:STM1923 KEGG:ns NR:ns ## COG: STM1923 COG1291 # Protein_GI_number: 16765265 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Salmonella typhimurium LT2 # 1 276 20 295 295 512 96.0 1e-145 MTGGHLGALYQPAELVIIGGAGVGAFIVGNNGKSIKGTLKAIPLLFRRSKYTKSMYMDLL ALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAMMLDFIVDYLRLIISGNMN TFEIEALMDEEIETHESESEVPANSLALVGDSLPAFGIVAAVMGVVHALASADRPAAELG ALIAHAMVGTFLGILLAYGFISPLASVLRQKSAETTKMMQCVKITLLSNLNGYAPPIAVE FGRKTLYSSERPSFIELEEHVRAVKNPNQQTTTEDA >gi|333596725|gb|GL892087.1| GENE 606 669431 - 670009 438 192 aa, chain - ## HITS:1 COG:no KEGG:ECL_01401 NR:ns ## KEGG: ECL_01401 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: Two-component system [PATH:enc02020]; Flagellar assembly [PATH:enc02040] # 1 192 1 192 192 384 99.0 1e-106 MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFS TDWFMTWEQNIHASMFCNAWQYLLKTGLCSGVDAVIKAYKLYLEQCPQQEEGPLLALTRA WTLVRFVESGMLELSRCNCCDGNFITHAHQPAGSFACSLCQPPSRAVKRRKLSRDAADII PQLLDEQIEHAV >gi|333596725|gb|GL892087.1| GENE 607 670012 - 670371 334 119 aa, chain - ## HITS:1 COG:no KEGG:ECL_01400 NR:ns ## KEGG: ECL_01400 # Name: not_defined # Def: transcriptional activator FlhD # Organism: E.cloacae # Pathway: Two-component system [PATH:enc02020]; Flagellar assembly [PATH:enc02040] # 4 119 1 116 116 201 97.0 6e-51 MGKMHTSELLKHIYDINLSYLLLAQRLISQDKPSAMFRLGVNEEMATMLGGLTLPQMVKL AETNQLVCQFRFDNPQTITRLTQESRVDDLQQIHTGILLSTRLLNEISQPDDVARKKRA >gi|333596725|gb|GL892087.1| GENE 608 671159 - 671587 398 142 aa, chain + ## HITS:1 COG:STM1927 KEGG:ns NR:ns ## COG: STM1927 COG0589 # Protein_GI_number: 16765269 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 1 141 1 141 142 199 69.0 2e-51 MSYSHLLVSVAVSPESHQLVARAVSIARPNNARISLITLAAEPEMYNQLAAPMLEDIREV LQEETQQFLRELVERANYPVHQTVIATGELSGHILDMCQKQNIDLVICGNHNQSFFSRAA CSAKTIVSSSQVDVLLVPLGGK >gi|333596725|gb|GL892087.1| GENE 609 671603 - 673027 1535 474 aa, chain - ## HITS:1 COG:otsA KEGG:ns NR:ns ## COG: otsA COG0380 # Protein_GI_number: 16129848 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Escherichia coli K12 # 1 474 1 474 474 800 81.0 0 MGRLVVVSNRIAPPDDKKASAGGLAVGVLGALKAAGGLWFGWSGEISNDEKPLKKVSRGN ITWASFALSEKDYDEYYSEFSNAVLWPAFHYRLDLVKFQRESYEGYMRVNALLADKLLPL IEEDDILWIHDYHLLPFARELRKRGVNNRIGFFLHIPFPTPEIFTALPQHDEILEALSDY DLLGFQTENDRLAFLDSVSGKTRLVTHGGKSHTAWGRNFHTEVYPIGIEPDEIAEQASGP LPPKLAQLKDELKHVKNIFSVERLDYSKGLPERFLAYETLLDKFPQHHGKIRYTQIAPTS RGEVQAYQDIRHQLETEAGRINGRYGQLGWTPLFYLNQHFERKILMKVFRYADVGLVTPL RDGMNLVAKEYVAAQDPADPGVLVLSQFAGAANELTSALIVNPYDRDDVANALNRALTMP LAERISRHSEMMETIVKNDINHWQARFIDDLRAIQPQSQEGNLQKKIATFPKLA >gi|333596725|gb|GL892087.1| GENE 610 673002 - 673805 498 267 aa, chain - ## HITS:1 COG:STM1929 KEGG:ns NR:ns ## COG: STM1929 COG1877 # Protein_GI_number: 16765271 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 335 64.0 5e-92 MADLLTAPPVLPGKFAFFFDLDGTLAGIEPHPDDVVVPDTVLENLQQLSRQNEGALALIS GRSMAELDVLASPYHFPLAGVHGAERRDIHDQLHIVSLPDTLIQALHAQLSSALETLPGT ELEAKGMAFALHYRQAPHHEAAIFAVARSVADAHPELALQPGKCVVEIKPAGINKGAAVA AFMAEAPFKGRTPVFFGDDLTDEAGFRVVNQAGGMSVKVGPGETIAGWRLENVASVWQWI SDVANQQQQQIAQNNGRNHYGSLSRRL >gi|333596725|gb|GL892087.1| GENE 611 673959 - 674939 1179 326 aa, chain - ## HITS:1 COG:araH KEGG:ns NR:ns ## COG: araH COG1172 # Protein_GI_number: 16132221 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 326 2 329 329 496 94.0 1e-140 MSSVTTSGAPKSAFSFGRIWDQYGMLVVFAALFVACAIFVPNFATFINMKGLGLAISMSG MVACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVLAGLMLGVLSGLVNGF VIARLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFTLGYANWLGLPAPIWLTVA CLILFGFLLNRTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASR MTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFS QYVVRGLILLAAVIFDRYKQKAKRTV >gi|333596725|gb|GL892087.1| GENE 612 674954 - 676468 185 504 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 261 477 2 217 245 75 25 6e-12 MQQSDPYLSFRGIGKTFPGVNALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYTPT TGTLAIRGEEVAFADTTAALNAGVAIIYQELHLIPEMTVAENIYLGQLPHKSGVVNRSLL NYEAGLQLKHLGLDVDPQTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIE NLFRVIRELRKEGRIILYVSHRMEEIFALSDAITVFKDGRYVRTFTDMQQVNHDQLVQAM VGRDLGDIYHWKPREYGPERLRLDNVKAPGVRTPISLSVRSGEIVGLFGLVGAGRSELMK GLFGGTRITQGQVFVDGKKVDIQKPAQAINAGIMLCPEDRKAEGIIPVHSVRDNINISAR RKFIRAGCLINDGWEASNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEDMKV ILLDEPTRGIDVGAKHEIYNVIYELAKRGVAVLFASSDLPEVLGVADRIVVMREGEIAGE LLHEQANEQQALSLAMPKVSQAVA >gi|333596725|gb|GL892087.1| GENE 613 676540 - 677529 1431 329 aa, chain - ## HITS:1 COG:araF KEGG:ns NR:ns ## COG: araF COG1879 # Protein_GI_number: 16129851 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 615 96.0 1e-176 MHKFTKALAAIGLAAVMSQSAIAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIAAKARGYDMKVIAVDDQFVNAKG KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKETAVMAITADELDTARRRTTGSMD ALKAAGFPEKQIYKVPTKSNDIPGAFDAANSMLVQHPEVKHWLVVGMNDNTVLGGVRATE GQGFKAPDVIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVTKGVEP PKFTEVTDVVLITRDNFKEELAKKGLGGK >gi|333596725|gb|GL892087.1| GENE 614 677846 - 678403 584 185 aa, chain - ## HITS:1 COG:STM1931 KEGG:ns NR:ns ## COG: STM1931 COG0693 # Protein_GI_number: 16765272 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Salmonella typhimurium LT2 # 1 185 1 185 185 310 83.0 7e-85 MAKVAVLLAPGFEEAEAIITIDILRRLQIEVETLACAGSRAVVSYHTIPMVADSTLTERS DTLYDAVVLPGGPQGSMNLAANREVIRFVSTHDEHGKLICPICSAAARVLGGNGLLKGRR YVCSGDLWETVNDGVYVDAPVVEDKNLISGKGLGHAFDFALTISARLLGDDAPVRDHAEH IYYPW >gi|333596725|gb|GL892087.1| GENE 615 678907 - 679410 442 167 aa, chain + ## HITS:1 COG:STM1932 KEGG:ns NR:ns ## COG: STM1932 COG1528 # Protein_GI_number: 16765273 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 196 63.0 1e-50 MTTQTMMQKLNAQMNLEFYASNLHLHLSAWCSRKSLNGTATFFRTQAQSNVTHMMRVFNF LKAIGANPTVKELETIEDNYSSLEELFQKTLEEYEQRCAKLSILADEAKAQQDIITLKFL RDMDREQQQDGMLLKTLADEIRNAKRAGICLEQTDRHLLDIATVQHH >gi|333596725|gb|GL892087.1| GENE 616 679552 - 680895 1542 447 aa, chain + ## HITS:1 COG:Cj0671 KEGG:ns NR:ns ## COG: Cj0671 COG2704 # Protein_GI_number: 15792025 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 4 442 15 467 474 427 52.0 1e-119 MITIEFIVIILCLLIGTRFGGMGLGLISGIGLFVLSFVFGLQPGKPPVDVMLTILAVIGC AATLQTAGGLNVMMQFAERLLRQHPQHITLLAPFTTWMLTFLCGTGHVVYTMFPIIADIA LKKGIRPERPMAVASVASQMAITASPVSVAVVSLVSILGAQHGIGHAWGILEILAVSVPA SLSGVAIAALWSLRRGKNLADDPEFQEKLKDPKQREFIYGGTETLMNQRFPKQAYWSTWI FFAGIAVVVLLGALPELRPAFEIKGKMTALSMNLVIQMMMLIAGAVMLLTCKVNASAISN GAVFKAGMVAIFSVFGVAWMSDTFFQAHLDELKMALEGVVKSHPWTYAIVLFLVSKLVNS QAAALTAVAPMGLMLGIDPKMLVAFFPASYGYFVLPTYPSDLACIGFDRSGTTRIGKFII NHSFILPGLIGVSCACVVSYLLVQTFF >gi|333596725|gb|GL892087.1| GENE 617 680976 - 681227 386 83 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2480 NR:ns ## KEGG: Ent638_2480 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 83 1 83 83 134 93.0 2e-30 MSQNLSADQELVSDVVACQLVIKQILDVIDVIAPVEVREKMSTQLKNIDFTNHPAAADPV TLRAIQKAIALIELRFTPQGESH >gi|333596725|gb|GL892087.1| GENE 618 681335 - 681418 74 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLRKILKSMWANYCTTFKDVPPGAMF >gi|333596725|gb|GL892087.1| GENE 619 681633 - 683051 1364 472 aa, chain + ## HITS:1 COG:mll1728 KEGG:ns NR:ns ## COG: mll1728 COG0477 # Protein_GI_number: 13471679 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 17 469 21 471 477 335 45.0 2e-91 MSENLSGKESRGLSPAGLLVAGAFFMEFLDGTVIATALPDMAKSFGVQAVDLNIGISAYL ITLAVLIPASGWIADRFGARKVFALALAIFTLASVFCGLSTTLDQFVAMRVLQGMGGALM VPVGRLAVLRTTPKHQLITAIATLTWPALVAPIIGPPLGGFITSYADWRWIFFINVPLGI IAILLALRLIPDLHEDTRRPFDLPGFVVTTLAMVSLVYAMELMSGEPLRTGLTATLFIVG VVALSLALRHFKRATWPMIRLDAMQVPTFRVTLYGGSLFRASISAVPFLLPLMFQVGFGM DAFHSGLLVLAVFVGNLTIKPATTPLIRSLGFKRLLLINGALNVLALLACAFLTPQTPVW LIMLILFLGGVFRSIQFTAISTLAFADVPSAQMSYANTLFSTATQLAVGLGITLGAIGIR IGEKVGDAMGLADMPGMSFRLAFVAIALICLVGMFDTLRLTNDAGSAVSSKK >gi|333596725|gb|GL892087.1| GENE 620 683094 - 683732 782 212 aa, chain - ## HITS:1 COG:STM1933 KEGG:ns NR:ns ## COG: STM1933 COG0698 # Protein_GI_number: 16765274 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Salmonella typhimurium LT2 # 1 212 1 212 212 394 91.0 1e-110 MKIALMMENSQAAKNPIILNELKAVADEKGFPVYNVGMSDENDYHLTYIHLGIMASILLN AKAVDFVVTGCGTGQGALMSLNIHPGVICGYCIDPADAFLFAQINNGNALSLPFAKGFGW GAELNVRLIFEKAFTGRNGEGYPPERKEPQVRNAGILNQVKAAVVKENYLDTLRAIDPEL VKTAVSGQRFQQCFFENCQDKEIEAFVRGIVG >gi|333596725|gb|GL892087.1| GENE 621 683979 - 684317 280 112 aa, chain + ## HITS:1 COG:no KEGG:ECL_01387 NR:ns ## KEGG: ECL_01387 # Name: not_defined # Def: putative lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 112 1 112 112 184 84.0 9e-46 MKRVIIAGTILLLAGCSINRQAEVSSTDAPNGIVRLDYGQAMLQNAWSDDYLNNGTATKA CQNMGYATASAYGQPIKTCTLISGSLCLNESVTIQYKCQGYAVTSSSQNPWY >gi|333596725|gb|GL892087.1| GENE 622 684558 - 685055 660 165 aa, chain + ## HITS:1 COG:STM1935 KEGG:ns NR:ns ## COG: STM1935 COG1528 # Protein_GI_number: 16765276 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Salmonella typhimurium LT2 # 1 165 1 165 165 286 94.0 2e-77 MLKTEMIDKLNAQMNLELFSSLLYQQMSAWCSYHSFEGAAAFLRRHAQEEMTHMQRLFDY LTDTGSLPRIDNVASPFAEYGSLDELFRATYEHEQLITQKINELAHAAMTSQDYPTFNFL QWYVAEQHEEEKLFKSVLDKLSLAGKSGEGLYFIDKELSTLDTQN >gi|333596725|gb|GL892087.1| GENE 623 685419 - 686561 1401 380 aa, chain + ## HITS:1 COG:tyrP KEGG:ns NR:ns ## COG: tyrP COG0814 # Protein_GI_number: 16129857 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 380 24 403 403 532 81.0 1e-151 MPLAAAGVGFSVTVLLLGSLWALMCYTALLLLEVYQHVPADTGLGSLAARYLGRYGQWIT GFSMMFLMYALTAAYISGAGELIASSINDGFGASLSPETGAIVFTLIGGGVVCAGTSLVD LFNRFLFSAKILFLVVMLVLLAPHVHKVNLLSLPLEKGLALSAIPVIFTSFGFHGSVPSI VSYMNGDIRKLRRVFVIGSAIPLIAYLFWQLVTLGSIDSTTFIGLMAQHSGLNGFLVALR NVVASSHVELAVHLFADLALATSFLGVALGLFDYMADLFQRRNTVAGRLQTGAMTFLPPL AFALFYPRGFVMALGYAGVALSVLALLLPSLLAWKSRQQHPQQGYRVAGGKPLLCVVFGC GVAIILVQVLIAAGMLPEVG >gi|333596725|gb|GL892087.1| GENE 624 686719 - 687387 886 222 aa, chain - ## HITS:1 COG:yecA KEGG:ns NR:ns ## COG: yecA COG3318 # Protein_GI_number: 16129858 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Escherichia coli K12 # 1 222 1 221 221 287 59.0 9e-78 MAEGPLNESEMAWLEETLISYGHDDASVIDVSELDGMLTAVLSGPVVVEPDTWLVAVWGG EKYIPRWKNDREMNRFIDLCFKHMNDIAERLSEYPDQFEPLFGYNDVDGQSYTVVEEWCY GYMRGVALTDWSSLPESLEADLAVIALHGTEENSEKLDALTEEEYMDSIASIQPAALRLY NYWVANPQQPEAKKPVVNGSKVGRNDPCPCGSGKKFKSCCLH >gi|333596725|gb|GL892087.1| GENE 625 687799 - 688920 1459 373 aa, chain + ## HITS:1 COG:PA4913 KEGG:ns NR:ns ## COG: PA4913 COG0683 # Protein_GI_number: 15600106 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Pseudomonas aeruginosa # 5 373 6 374 374 534 72.0 1e-152 MSLKFTKTPLSLVLAGCLVTAFSAQADIVIGVAGPFTGPNATYGDQYWHGATQAAEDINA AGGINGEKIKLVQGDDACEPKQAVAVANRLVDQDKVKAVVGHFCSSSTMPASEVYSDAGI LSITPGSTNPLITERGMSDMFRMCGRDDQQGQVASDFIIDKLNAKRVVIIHDKDTYGQGL ADATKAALAKRGVKDVMYEGLSRGEKDFNALVTKIGAQKPDVVFFGGCHPEAGPLVRQMR EQGVQAKFFSGDCIVNEEMVTAAGGAQYTNGIYMTFGKDPRLIPDGKAVIEKFRAGKFEP EGYTLYAYASVQAIAAAFKATKGTDSAKASEWLKANPVDTVMGKKAWDSKGDLKVSDYVV YQWDDKGKYKEVP >gi|333596725|gb|GL892087.1| GENE 626 688989 - 689903 1210 304 aa, chain + ## HITS:1 COG:PA4912 KEGG:ns NR:ns ## COG: PA4912 COG0559 # Protein_GI_number: 15600105 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Pseudomonas aeruginosa # 1 304 1 304 304 432 86.0 1e-121 MSTFFLQQLINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLSAIGLALLAF FGLHSFPLLILGTLVFTVVVTGVYGWTIERIAYKPLRNSTRLAPLISAIGMSLILQNYVQ LSQGPRQQGVPTMLDGVLRFHLGEGFVQITYTKVFILIASFAGMLVLTWIINRTRLGRMC RAVQQDRKMASILGINTDRIISLVFVIGAAMAGLAGVLITMNYGTFDFYVGFVIGIKAFT AAVLGGIGSLPGAMLGGLILGVAEAQFSGMVNSDYKDVFSFGLLVLILIFRPQGLLGRPV VAKV >gi|333596725|gb|GL892087.1| GENE 627 689915 - 691189 1393 424 aa, chain + ## HITS:1 COG:PA4911 KEGG:ns NR:ns ## COG: PA4911 COG4177 # Protein_GI_number: 15600104 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Pseudomonas aeruginosa # 8 424 9 425 425 568 79.0 1e-162 MTSDGFSLKRCVLDSIFSGMIALIIFGPIAGVILDGYSFNFDGQRLAWIVGTVMLGRFFL SAFSATAAGRRLHARFESDNAGVYVRPPEYKSRMRWIIPLIITLAICFPFVATKYVLTVA ILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSMLPLAALMA AGAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGVSAPAPTLFGLEFG RRAKEGGVPFHEFFGLTYNPNMKFIFIYAVLFLVVMLVLYVKHRLTRMPIGRAWEALRED EIACRSMGLNHVLVKLSAFTLGASTAGIAGVFFATYQGFVNPTSFTFFESALILAIVVLG GIGSTVGVVLAAFVLTVTPELLRSFAEYRVLLFGMLMVVMMIWRPRGLIRINRSGFAVRK GVAP >gi|333596725|gb|GL892087.1| GENE 628 691186 - 692061 241 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 274 1 229 245 97 26 2e-18 MNATILRVEHLMMHFGGIKALNDVNLEVQRGSITALIGPNGAGKTTVFNCLTGFYRASGG NILFNARHKTTNVIQVLGQKFQPDDWLHPAQLGQRLFYKMFGGTHLVNRAGLARTFQNIR LFREMSVVENLLVAQHMRVNRNLLAGVLNTPAYRRAESDALDRAFYWLEVVDLVDCANRL AGEMSYGQQRRLEIARAMCTGPEMICLDEPAAGLNPVETHKLSEIIRFLRDHHDITVLLI EHDMGMVMGISDDIIVLDHGDVIARGKPAEIQHNEKVIAAYLGTDESEVNL >gi|333596725|gb|GL892087.1| GENE 629 692070 - 692774 254 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 225 1 231 245 102 27 6e-20 MLQFQDVDVFYGVIQALKQVSLEVNKGETVALIGANGAGKSTLLMSVFGQPRIRNGKILF CGEDISHKSTHYVATGGIAQAPEGRRIFPDMSVEENLLMGTIPVGNQHAAEDIQSMFDLF PRLKERRNQRAMTLSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPLVVKQIFQTLRELA RNGMTIFLVEQNAHHALKLSDRGYVMVNGQIRLSGSGEALLKDPEVRKAYLGGV >gi|333596725|gb|GL892087.1| GENE 630 692918 - 693397 466 159 aa, chain + ## HITS:1 COG:no KEGG:ECL_02115 NR:ns ## KEGG: ECL_02115 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 8 159 1 156 156 166 56.0 3e-40 MRGTGATMTLDALFQLMKIISPSDGDIANFMTMLIATKNHSDALLPFSQRVYMLSVAHSD PKKAAALLSSCQPEAGSPLPLLNFSGWPDVRYATSGELQTPESEEYFHKISSAATLLRAA IIDAEQQKNTPAFYILDKVLNLNSALPERYKKMANISYS >gi|333596725|gb|GL892087.1| GENE 631 693403 - 694329 441 308 aa, chain - ## HITS:1 COG:PA5293 KEGG:ns NR:ns ## COG: PA5293 COG0583 # Protein_GI_number: 15600486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 285 5 289 305 290 52.0 2e-78 MSLPPLYALRAFEVAARLNSFSRAAETLNITPGAVSRHVRTLELWFDCELFKRQGPRVEV TEAGRVLAGQLNESFTSIEWACRAFRSENHLLRLKAPSTLTMRWLLDVLRSFRHQHAKPQ VEIASVWMDIDTVDFNLEPYDCAILLGNGRFGDTTESQLLFQEWLIPVCTPSLIEPARQR LPQCELIHPSPDRRDWRRWLRRTGLFPGLDMSSGMVFDTLEQGSIAAMNGHGIAIADLHL TLDALKSGLLGLPFREAIATGDGYYLVWPKNSLKRESIQHLLAWLQNHTPVVPALDIDYL EYDDSRVY >gi|333596725|gb|GL892087.1| GENE 632 695041 - 695589 249 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 175 486 665 904 100 35 2e-19 MRFNIPTLLTLFRVVLIPFFVLAFYLPVVWAPFACALIFLIAAVTDWFDGYLARRWNQST RFGAFLDPVADKVMVAIAMVLVAEHYHTWWVTLPAATMIGREIIISALREWMAELGKRSS VAVSWIGKVKTTAQMAALVWMLWRPNAWVEWAGIGLLWVAAVLTLWSMLQYLNAARGDLL EQ >gi|333596725|gb|GL892087.1| GENE 633 695646 - 697412 2108 588 aa, chain - ## HITS:1 COG:ECs2651 KEGG:ns NR:ns ## COG: ECs2651 COG0322 # Protein_GI_number: 15831905 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1124 93.0 0 MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVALIHNIDVTVTHTETEALLLEH NYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETL ALLQKIFPVRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLAGK DDQVLTQLIARMEKASAALEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAG LACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPSEILLDFT LDDKTLLAESLSELAGRRVNVQTKPRGDRARYLKLARTNAATALTTKLSQQSTVSQRLTA LATLLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITSITPGDDYAAM NQVLRRRYGKAIEESKIPDVILIDGGKGQLGQAKAVFESLDVEWDKHHPLLLGVAKGADR KAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAISGHRKKRAKVKNTSTLETIE GVGPKRRQMLLKYMGGLQGLLNASMEEIAKVPGISQGLAEKIYYSLKH >gi|333596725|gb|GL892087.1| GENE 634 697475 - 697975 463 166 aa, chain - ## HITS:1 COG:STM1947 KEGG:ns NR:ns ## COG: STM1947 COG2197 # Protein_GI_number: 16765285 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 166 53 218 218 300 92.0 8e-82 MDMNMPGIGGLEATRKIARMFVDTKVIMLTVHTENPLPARVMQAGAAGYLSKGAAPQEVV NAIRTVFAGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISE QLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAESLISQ >gi|333596725|gb|GL892087.1| GENE 635 698597 - 698821 309 74 aa, chain + ## HITS:1 COG:no KEGG:ECL_01373 NR:ns ## KEGG: ECL_01373 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 74 1 74 74 92 95.0 5e-18 MSTPEFATAENNQELAQEVNCLKSLLTLMLQAMGQADAGRVIIKMEKQIAQMEDQAESAV FANTVKQIKQAYRQ >gi|333596725|gb|GL892087.1| GENE 636 698887 - 699408 333 173 aa, chain - ## HITS:1 COG:STM1950 KEGG:ns NR:ns ## COG: STM1950 COG2771 # Protein_GI_number: 16765288 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 173 68 240 240 264 73.0 7e-71 MAQYQSENYFAIDPVLKPENFIQGHLPWTDELFADAQQLWDGARDHGLRKGITQCLMLPN HALGFLSVSRNSLQANAISSEEVELRLQMLVQMALTTLLRFEHETVMPPEMKFSKREREI LKWTAEGKTSAEIAIILSISENTVNFHQKNMQKKFNAPNKIQIACYAAATGLI >gi|333596725|gb|GL892087.1| GENE 637 699833 - 700585 279 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 18 241 27 256 563 112 33 8e-23 MSAIDVKNLVKKFHGQTVLHGIDLEVEQGEVVAIIGPSGSGKTTLLRSINLLEQPEGGTI RVGDITIDTGKSINQQKGLIRRLRQHVGFVFQSFNLFPHRTVLENIIEGPVIVKGEPKED ATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPDVILFDEPTSALDPELV GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFANPQQPRT RQFLEKFLMQ >gi|333596725|gb|GL892087.1| GENE 638 700582 - 701250 831 222 aa, chain - ## HITS:1 COG:STM1952 KEGG:ns NR:ns ## COG: STM1952 COG0765 # Protein_GI_number: 16765290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 222 1 222 222 382 96.0 1e-106 MQESIQLVIDSLPFLLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSNIWPVRWLARFYIS VFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISSIDKGQWE AAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS RTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERDPK >gi|333596725|gb|GL892087.1| GENE 639 701272 - 702258 1166 328 aa, chain - ## HITS:1 COG:yedO KEGG:ns NR:ns ## COG: yedO COG2515 # Protein_GI_number: 16129866 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Escherichia coli K12 # 1 328 33 360 360 597 91.0 1e-170 MSLQNLTRFPRLEFIGAPTPLEYLPRFSDYLGRDIFIKRDDVTPMAMGGNKLRKLEFLAA DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTQAENYLTNGNRLLLD LFNVQVEMVDALTDPAAQLDELATRLEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC EGAVSLSSVVVASGSAGTHAGLAVGLEQLMPDAELIGVTVSRSVADQKPKVVTLQQAVAE QLALQAKAEILLWDDYFAPGYGTPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIA RKRFKDEGPILFVHTGGAPALFAYHPHV >gi|333596725|gb|GL892087.1| GENE 640 702362 - 703162 1219 266 aa, chain - ## HITS:1 COG:fliY KEGG:ns NR:ns ## COG: fliY COG0834 # Protein_GI_number: 16129867 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 266 1 266 266 456 91.0 1e-128 MKLALLGRQALMGMMAVALVAGMSVKTFAAENLLNKVKERGTLLVGLEGTYPPFSFQGDD GKLTGFEVEFAQELAKHLGVKASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF STPYTVSGIQALVKKGNEGSIKSAADLKGKKVGVGLGTNYEEWLRQNVQGVDIRTYDDDP TKYQDLRVGRIDAILVDRLAALDLVKKTNNTLAVAGDAFSRQASGVAVRKGNEDLLKAID GAIAEMQKDGSLKALSEKWFGADVTK >gi|333596725|gb|GL892087.1| GENE 641 703249 - 703800 451 183 aa, chain - ## HITS:1 COG:no KEGG:ECL_01367 NR:ns ## KEGG: ECL_01367 # Name: fliZ # Def: flagella biosynthesis protein FliZ # Organism: E.cloacae # Pathway: not_defined # 1 183 1 183 183 360 96.0 1e-98 MTVQQSKRRPLSRYLKDFKHSQTHCAHCKKLLDRITLVRRGEIVNKIAISRLDTLMDEAA WLEEQKEWVALCRFCGDLHCKEQSDFFDIIGFKQFLFEQTEMSHGTVREYVVRLRRLGQH LTVQNISRDLLTTGYLDENLEPWLPATSTNNYRIALRKYAQYKVQMPGVIKQKVHAGTTS DIY >gi|333596725|gb|GL892087.1| GENE 642 703855 - 704544 746 229 aa, chain - ## HITS:1 COG:STM1956 KEGG:ns NR:ns ## COG: STM1956 COG1191 # Protein_GI_number: 16765294 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Salmonella typhimurium LT2 # 1 229 11 239 239 387 96.0 1e-108 MDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYDALQGTAFTTY AVQRIRGAMLDELRSRDWVPRSVRRNAREVAHAMGQLEQELGRNATETEVAERLGIPVEE YRQMLLDTNNSQLFSYDEWREEHGDSIELVTDEHQQENPLHHLLEGNLRQRVMEAIEALP EREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL >gi|333596725|gb|GL892087.1| GENE 643 704738 - 706447 1378 569 aa, chain - ## HITS:1 COG:ECs2662 KEGG:ns NR:ns ## COG: ECs2662 COG1344 # Protein_GI_number: 15831916 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 569 1 585 585 564 78.0 1e-160 MAQVINTNSLSLITQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKG LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSQSDLDSIQDEIKSRL DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLNGFNVNGKGT ITNKAATVSDLTSAGAKLNATTGNYDLTTTNKDLTTDVAFSKLKTGDTVTTNGATYTYDA KAGNFTTTKSTNGADEAAKTANRDALAATLKADPGQTASGTYTTKDGTVSFDTDSSGNIT IGGKAAFVDDAGNLTTNNAGGAAAATMTSVLKAASENADGATLNFKGTEYTVATGGTAAA SGVVTYKAAVSTDIVLAETKANTTTVNMNSGVLSKALTFDATGASNDATYVDDAGNITDV ADYTVSYAVNKDNGNVTVAAYSSATDTNKSYSPTIGAAVNVTSAGKITTDATSAGTATTD PLAALDDAISSIDKFRSSLGAVQNRLSSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMS KAQIIQQAGNSVLSKANQVPQQVLSLLQG >gi|333596725|gb|GL892087.1| GENE 644 706717 - 708129 1173 470 aa, chain + ## HITS:1 COG:ECs2663 KEGG:ns NR:ns ## COG: ECs2663 COG1345 # Protein_GI_number: 15831917 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Escherichia coli O157:H7 # 1 470 1 465 465 447 77.0 1e-125 MASISTLGVGSGLQLGDILDSLTAAQKAQLTPITKQQSSYTAKLSAYGTLKSALESFQTA NTALSKADLFTATTTISSSTAFSATTTGSAIAGKYTISVSQLAQAQTLTTSKTQSDSKTA IATADSKITIQQGGDKKPVTIDISAANSSLTGIRDAINKADAGVSASIINVGNGEYRLSI TSKETGEDNAMTISVSGDSALQSFMGYNGTKGDASNGMLESVNAQNAKLKVNNVDIENSS NTISDALEDITLNLNDITSGNQTLTITNDTSKATKAINDWVTAYNSLQDTFSSLTKYTAV DAGSDAQNTSNGALLGDSTLRTIQTQLRSVLNNPHTSSNIKTLAQAGITTDPSTGKLEVD DDKLSAAMKNSAAGIKDLLIGDGKTSGITTTVGTNLTGWLSSTGIIQAAKDGVSKTLNNL TKQYNAASERIDTMVARYKEQFTQLDVMMNSLNSTSSYLTQQFENTSSNK >gi|333596725|gb|GL892087.1| GENE 645 708160 - 708570 517 136 aa, chain + ## HITS:1 COG:ECs2664 KEGG:ns NR:ns ## COG: ECs2664 COG1516 # Protein_GI_number: 15831918 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 190 80.0 5e-49 MYGAKGTQAYAKIEVESAVMSASQQQLVIMLFDGALSALVRARLFLADGNIQAKGLALSK AINIIENGLKVGLDEESKDELTQNLIALYAYMVRRLLQANLRNDASAIEEVENLLRNIAD GWKEAAGIPTLVQDAV >gi|333596725|gb|GL892087.1| GENE 646 708570 - 708941 339 123 aa, chain + ## HITS:1 COG:no KEGG:Entcl_1815 NR:ns ## KEGG: Entcl_1815 # Name: not_defined # Def: flagellar export chaperone # Organism: E.cloacae_SCF1 # Pathway: Flagellar assembly [PATH:esc02040] # 1 121 1 121 125 148 69.0 8e-35 MSNAPQLYALYQQLLEQSQLMLRLARQGLWDDLIICETDYVNAVHSLARLTQESEPSMQI QEQLRPTLRVILDNEGQVKTLLQARMDELAKLVGQSSIQKTVLSTYGNQGGHVLVPQSNS DIN >gi|333596725|gb|GL892087.1| GENE 647 709040 - 710527 1723 495 aa, chain + ## HITS:1 COG:ECs2666 KEGG:ns NR:ns ## COG: ECs2666 COG0366 # Protein_GI_number: 15831920 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 495 1 495 495 927 87.0 0 MRNPTLLQCFHWYYPTGGELWREVTALAPNLNEIGINMVWLPPAYKGASGGYSVGYDSYD LFDLGEFDQKGSVATKYGDKAQLLEAINALKSNQIAVLLDVVVNHKMGADEKEPVRVQRV DAQDRTQISDEIIECEAWTRYTFPVRAGQYSQFIWDYKCFSGIDHIENSNEDGIFKIVND YTGEGWNDQVDDEMGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTHCDGFRLDAVKHI PAWFYKEWIEHVQEVAPQPLFIVAEYWSHEVDKLQHYINQVDGKTMLFDAPLQMKFHEAS RQGRDFDMSQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEAWFKPLAYALILLREN GVPSVFYPDLFGASYDDTGGDGETYHIDMPVIEQLHELILARQRFAHGVQTLFFDHPNCI AFSRSGTEDHPGCVVVLSNGDDGEKTICLGENYGNKTWRDFLGNREETVTTAADGEGTFF CNGGSVSVWVIEDAL >gi|333596725|gb|GL892087.1| GENE 648 710684 - 711097 517 137 aa, chain - ## HITS:1 COG:no KEGG:ECL_01352 NR:ns ## KEGG: ECL_01352 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 137 1 137 137 240 86.0 1e-62 MKKVAIVAAMLTLAGCVQVDNYQEVIKHPVPSQLAGYWQSKGPQSAMVSPEAIATLVVTP EGDTLDCRQWQRVIAVPGKIMLRSDDYYNVTRKLDVYPLERDGAALEYDGMELYKVDRPT VECADYLSKNPLESKLP >gi|333596725|gb|GL892087.1| GENE 649 711172 - 711486 438 104 aa, chain - ## HITS:1 COG:ECs2676 KEGG:ns NR:ns ## COG: ECs2676 COG1677 # Protein_GI_number: 15831930 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Escherichia coli O157:H7 # 2 104 3 104 104 124 82.0 4e-29 MAIQGIEGVLSQLQATAMTARNQSVADQPPGVSFAGQLHAALDRISDKQNAARTQAEKFT LGEPGVALNDVMADLQKASVSLQMGLQVRNKLVSAYQDVMSMQV >gi|333596725|gb|GL892087.1| GENE 650 711715 - 713397 1720 560 aa, chain + ## HITS:1 COG:STM1969 KEGG:ns NR:ns ## COG: STM1969 COG1766 # Protein_GI_number: 16765307 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Salmonella typhimurium LT2 # 1 560 1 560 560 853 84.0 0 MSATAASTAPQNKSLEWMNRLRANPKIPLIVAGAAAIAIVVAMVLWAKSPDYRTLYSNLS DQDGGAIVTQLTQMNIPYRFADNGGALEVPADKVHELRLRLAQQGLPKGGAVGFELLDQE KFGISQFSEQVNYQRALEGELARTIETLGPVKSARVHLAMPKPSLFVREQKSPSASVTVN LEPGRALDEGQISAVTHLVSSAVAGLPPGNVTLVDQSGHLLTQSNTAGRDLNDAQLKYAA DVEGRLQRRIEAILGPVVGNSNVHAQVTAQIDFSNKEQTEEQYAPNGDAARAVLRSRQIN ETEQVGGQYPGGVPGALSNQPAPANAAPISTPPANPQNGQQANQQTTSTANSTGPRNSSR NETTNYEVDRTIRHTKLNTGDIERLSVAVVVNYKTLPDGKPLPLTAEQMKQIENLTREAM GFSEKRGDTLNVVNSPFNPVDESGGELPFWQQQAFFDQLMSAGRWLLVLIVAWLLWRKGV RPQLQRRAEAEKAALEQKNARPDEEEAVEVRLSKDEQMQQRRANQRMGAEVMSQRIREMS DNDPRVVALVIRGWMGNEHE >gi|333596725|gb|GL892087.1| GENE 651 713390 - 714388 1316 332 aa, chain + ## HITS:1 COG:ECs2678 KEGG:ns NR:ns ## COG: ECs2678 COG1536 # Protein_GI_number: 15831932 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 332 1 331 331 531 96.0 1e-151 MSNTLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQILSAAMANVRQISNKQLTEVLAEF EQEAEQFAALNVNANEYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAA DLIRDEHPQIIATILVHLKRGQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVL NNLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENL VEVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLS QVENEQKAILLIVRRLAETGEMVIGSGDDTYV >gi|333596725|gb|GL892087.1| GENE 652 714381 - 715088 841 235 aa, chain + ## HITS:1 COG:STM1971 KEGG:ns NR:ns ## COG: STM1971 COG1317 # Protein_GI_number: 16765309 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Salmonella typhimurium LT2 # 1 235 1 235 235 303 79.0 2e-82 MSDELSWKRWTPDDLSPPTAEFTPAIVSSDEDDTGAGVPELSEEEQRAQMLAQMQMQAHE QGFNAGMNEGRQAGHAQGYQEGLAQGLEQGIEQARQQQAPLHARMQQLVSEFQHTLDALD SVISSRLMQMALEAARQVIGQTPVVDNAALIKQIQGLLQQEPLFSGKPQLRVHPDDLQRV EESLGATLSLHGWRLRGDPSLHHGGCKVSADEGDLDASVATRWQELCRLAAPGVV >gi|333596725|gb|GL892087.1| GENE 653 715088 - 716458 1640 456 aa, chain + ## HITS:1 COG:STM1972 KEGG:ns NR:ns ## COG: STM1972 COG1157 # Protein_GI_number: 16765310 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Salmonella typhimurium LT2 # 1 456 1 456 456 821 94.0 0 MTARLTRWLNTLDNFETKMAQLPSVRRYGRLTRATGLVLEATGLQLPLGATCVIERQDGA DTREVESEVVGFNGQRLFLMPLEEVEGILPGARVYAKNISGDGLQSGKQLPLGPALLGRV LDGSGKPLDGLPSPDTTETGALITQPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGL FAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEA GHYPAIDIEASISRAMTALITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDK AIALWPQLEAFLQQGIFERADWEDSLQALELIFPQV >gi|333596725|gb|GL892087.1| GENE 654 716480 - 716923 423 147 aa, chain + ## HITS:1 COG:STM1973 KEGG:ns NR:ns ## COG: STM1973 COG2882 # Protein_GI_number: 16765311 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis chaperone # Organism: Salmonella typhimurium LT2 # 1 147 1 147 147 177 85.0 7e-45 MAQNSALSTLKDLAEKEVDDAALQLGAMRRGCQQAEEQLKMLIDYQHEYRTNLNTDMTQG IGSQRWINYQQFIQTLEKAIEQHRQQLNQWTQKVDTALNFWREKKQRLQAWQTLQDRQIA ASTLAENRLDQKKMDEFAQRASMRKPE >gi|333596725|gb|GL892087.1| GENE 655 716920 - 718137 1137 405 aa, chain + ## HITS:1 COG:STM1974 KEGG:ns NR:ns ## COG: STM1974 COG3144 # Protein_GI_number: 16765312 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Salmonella typhimurium LT2 # 1 405 1 405 405 211 50.0 2e-54 MITLQQLLMTDSDPSGGTLTGKGAEGAQDFLSLLAGALTETTGKGKDAPLTLADLKAAGS KLSTAAKEKNGDTTLQAKIAELLSRQETLTGEDTAVALQSLVSGLKPAANTDALKALTQP DAKANSETTTEEEELAGLSALMAMLPHQQTTTPVAAQPASTGEIAPRAALPSALTQTDNG QQPPLSHALTGQEKMPVQDGDTSLPATASAVTPAVAAVAEKQDVVSTASSVASPTATLAP IVSHLAPSQPAATVATAPVLSQPLGTHEWQQNLSQHITLFTRQGQQTAELRLHPEDLGQV QISLKLDDNQAQLQMVSPHSHVRAALEAALPILRTQLAENGIQLSQSSVSSEGFTGQQQS SSGQQQHASRSGQPGGFNDESEELLPTPAALQSAARGSRAVDIFA >gi|333596725|gb|GL892087.1| GENE 656 718244 - 718714 480 156 aa, chain + ## HITS:1 COG:ECs2683 KEGG:ns NR:ns ## COG: ECs2683 COG1580 # Protein_GI_number: 15831937 # Func_class: N Cell motility # Function: Flagellar basal body-associated protein # Organism: Escherichia coli O157:H7 # 1 156 1 154 154 218 75.0 5e-57 MTDSAITKKSKRSIWIPLLVLITLAACATAGYSYWRMQQEPSSAAAKAEAPPPPAPVFYP LDTFTVNLGDADRVLYVGITLRLKDEATRARLNDYLPEVRSRLLLLFSRQDASTLATDVG KQKLVDAIKQTLATPLVNGQPKQEVTDVLYTAFILR >gi|333596725|gb|GL892087.1| GENE 657 718719 - 719723 1334 334 aa, chain + ## HITS:1 COG:STM1976 KEGG:ns NR:ns ## COG: STM1976 COG1868 # Protein_GI_number: 16765314 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Salmonella typhimurium LT2 # 1 334 1 334 334 624 94.0 1e-178 MGDSILSQAEIDALLNGDSDKSDDPKPGLTGDDNIRPYDPNTQRRVVRERLQALEIINER FARQFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALESYSDAWKAINPLEVEYV RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR HEDQNWRENLVRQVQHSQLELVANFADISMRLSQILKLQPGDVLPIDKPDRIIAHVDGVP VLTSQYGTINGQYALRVEHLINPILNSLNEEQPK >gi|333596725|gb|GL892087.1| GENE 658 719720 - 720133 636 137 aa, chain + ## HITS:1 COG:STM1977 KEGG:ns NR:ns ## COG: STM1977 COG1886 # Protein_GI_number: 16765315 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Salmonella typhimurium LT2 # 1 137 1 137 137 236 96.0 1e-62 MSDMNNPSDENSGALDDLWADALNEQKTTPTKSAADAVFQQLGGGDVSGTLQDIDLIMDI PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV RITDIITPSERMRRLSR >gi|333596725|gb|GL892087.1| GENE 659 720136 - 720510 371 124 aa, chain + ## HITS:1 COG:STM1978 KEGG:ns NR:ns ## COG: STM1978 COG3190 # Protein_GI_number: 16765316 # Func_class: N Cell motility # Function: Flagellar biogenesis protein # Organism: Salmonella typhimurium LT2 # 1 124 2 125 125 140 70.0 5e-34 MKTQATLSAPSAVPGSPLLQVSGALFGIIAFILIAAWLAKRFGLAGKTAGTRGLKVSAST PLGPRERVVIVEVEDARLVLGVTASSINVLHTLPPAPATVETTSQAPADFQSVMKSLLKR PGRS >gi|333596725|gb|GL892087.1| GENE 660 720510 - 721247 858 245 aa, chain + ## HITS:1 COG:STM1979 KEGG:ns NR:ns ## COG: STM1979 COG1338 # Protein_GI_number: 16765317 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 360 91.0 1e-99 MRRLLFLTLAGLGLFAPSVYAQLPGLVSTPLANGGQSWSLSVQTLVFITSLTFIPAILLM MTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYTEAYQPFSEDK ISMQVALEKGAQPLREFMLRQTREADLALFARLANTGELQGPEAVPMRILLPAYVTSELK TAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKIMLFVLVDGWQLLVSSLA QSFYS >gi|333596725|gb|GL892087.1| GENE 661 721258 - 721527 449 89 aa, chain + ## HITS:1 COG:STM1980 KEGG:ns NR:ns ## COG: STM1980 COG1987 # Protein_GI_number: 16765318 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliQ # Organism: Salmonella typhimurium LT2 # 1 89 1 89 89 97 91.0 6e-21 MTPESVMMMGTEAMKVAIAVAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFV AIIVAGPWMLNLLLDYMRNLFTNLPYIIG >gi|333596725|gb|GL892087.1| GENE 662 721534 - 722319 1010 261 aa, chain + ## HITS:1 COG:STM1981 KEGG:ns NR:ns ## COG: STM1981 COG1684 # Protein_GI_number: 16765319 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Salmonella typhimurium LT2 # 1 259 1 259 264 335 80.0 5e-92 MLHFTSDQFVQWLGIYFWPMLRIMALISTAPILSEKSVPKRVKIGLGIVITIIVAPSLPA VDIPIFSPNAIWIALQQVMIGVAVGFTMQLAFAAVRTAGELIGLQMGLSFATFVDPGSHL NMPVLARIIDLLAMLLFLSFNGHLWLISMLVDTFHTLPIGDNPVNSNAFLALVRAAGLIF LNGLMLALPIITLLLTVNLALGLLNRMAPQLSVFVIGFPVTLTVGLLLMSLLMPLIAPFC EHLFSEIFNLLADIVSELPRK >gi|333596725|gb|GL892087.1| GENE 663 722617 - 723240 326 207 aa, chain + ## HITS:1 COG:STM1982 KEGG:ns NR:ns ## COG: STM1982 COG2771 # Protein_GI_number: 16765320 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 346 85.0 2e-95 MSTIIMDLCSYTRLGLTGYLASRGVRKRDINDAHTVEELAAACDVHKPGVVFINEDCFIH DPANSQHIKQIINQHPKTLFIVFMAIANIHFDEYLLVRKNLLISSKSIKPESLDDILGDY LNKEVKNVGAINLPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI KTHNKQVIYHVVRLTDNVTNGIFVNMR >gi|333596725|gb|GL892087.1| GENE 664 723340 - 723528 277 62 aa, chain - ## HITS:1 COG:no KEGG:ECL_03234 NR:ns ## KEGG: ECL_03234 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 62 1 62 62 121 96.0 1e-26 MKVNDRVTVKTDGGPRRPGVVLAIEEFNEGTMYLVSLEDYPLGIWFFNELGHPDGIFVET AE >gi|333596725|gb|GL892087.1| GENE 665 723657 - 723884 345 75 aa, chain + ## HITS:1 COG:no KEGG:ECL_03235 NR:ns ## KEGG: ECL_03235 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 75 1 75 75 99 93.0 6e-20 MKTDKEYSDTIKREVEVDVDALLAAINEISESEVHRAEDNSDRVVVNGRDYHTYRELAEA FELDIHDFSVSETNR >gi|333596725|gb|GL892087.1| GENE 666 724180 - 724980 756 266 aa, chain + ## HITS:1 COG:STM1986 KEGG:ns NR:ns ## COG: STM1986 COG3769 # Protein_GI_number: 16765322 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 266 1 269 271 332 60.0 4e-91 MPSLEETLLVFTDLDGTLLDFHTLDWQPAAPWLAKLRDKQIPVILCSSKTTAGMQDMQQE LGLGGLPYIAENGAVIQPDVRWENAARFISAKKHDDIWQFLAQVRQDLHLKFTTFDDVDD RVVAEWTGLSRPRSVLARKHEASVTLIWRDSDEQMKRFAAELARQGLKMVQGARFWHILD AGCGKDVAVHWLVEQYRLHEGFEPTTLGLGDGPNDAPLLDSVGFAVVVKGFNREGVSLEN NDPARVYRTQHTGPTGWCEGLDYFLT >gi|333596725|gb|GL892087.1| GENE 667 724965 - 726692 1482 575 aa, chain - ## HITS:1 COG:yedQ_2 KEGG:ns NR:ns ## COG: yedQ_2 COG2199 # Protein_GI_number: 16129902 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 395 572 1 178 179 256 69.0 1e-67 MVSDNQGVCVQHDTFGVKQSFLQWLHKRSNPRLIVNLCFIVVLIFSTLLTWREVVVLEDA YISSQRNHLATVASALDRQLQFSVDKMLFFRHSMRDALETPLAFGVLHDAVKRFARLRTS PAWQIAVDKQRTLPINGVSDAFVEKTTLLKRDDEYLDNELSAALEVGYLLRLASSASRNE ERVIYVSRAGFFLETDMPGNASDIVPRYYRLVTQPWFTHQSERENRARAVRWFIPPPSSF VGKKPLITASVPVYYQRVWYGVVAMDFTLATLRRLLVEAVNDAPEGEYQLYDNRLTLLAT SGSPAADVNHFDPRELAQIAHAIESDSEGGIRLGSRFVSWERLDHFDGVVLRVHTLDEGV RGDFGSISIVLALLWALFTAMLLISWLVIRRMVSNMYSMQNSLQWQAWHDPLTRLNNRGS LFEQAKRLAKQCEQQSLPFSVIQIDLDCFKSINDRFGHQAGDKVLTHAAGLIASTLGAKD IAGRVGGEEFCVVLPGMTLEEAAEVAEQIRERIDSKEILIKKSTTLRVSASFGVSGAQEK GNYHFENLQSTADARLYEAKQRGRNRVIWQDHVKK >gi|333596725|gb|GL892087.1| GENE 668 727010 - 727855 1033 281 aa, chain - ## HITS:1 COG:yedI KEGG:ns NR:ns ## COG: yedI COG2354 # Protein_GI_number: 16129904 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 281 25 305 305 399 79.0 1e-111 MGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSFINKVILVPLALLISAF IPWAITPLLMIGGAFLCFEGAEKVLHMLAARKQKDTPEMRQQRLEALAAQDPKTFERDKV KGAIRTDFILSAEIVAITLGIVSEAPLMNQVLILSGIAILVTIGVYGLVGLIVKLDDIGF WLEKKSSAIARGIGKSLLVLAPWLMKTLSVVGTLAMFLVGGGIIVHGVASLHHMIEHFAS GQGALVAAVLPTLLNLVLGFIVGLIVVAVVKLVEKVRGKSH >gi|333596725|gb|GL892087.1| GENE 669 728100 - 729014 1186 304 aa, chain + ## HITS:1 COG:STM1990 KEGG:ns NR:ns ## COG: STM1990 COG0697 # Protein_GI_number: 16765326 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 302 1 302 306 415 84.0 1e-116 MRFRHLLPLIGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLTAGVLLMAFLLLRGH RLPPLRPLLNAALIGLLLLAVGNGAVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIR TRKLEWLGIAIGLVGIIMLNSGGNLSGNPWAAVLIMVGSMSWAFGSVYGSRIELPSGMMA GAIEMLAAGIVLLIASALTGEKLTAMPDLAGFLAVGYLALFGSIIAINAYMYLIRNVSPA VATSYAYVNPVVAVLLGTGFAGEVLSTIEWLALGVIVFAVVLVTLGKYLLPAKPIVTPCE VEKP >gi|333596725|gb|GL892087.1| GENE 670 728986 - 729477 361 163 aa, chain - ## HITS:1 COG:vsr KEGG:ns NR:ns ## COG: vsr COG3727 # Protein_GI_number: 16129906 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Escherichia coli K12 # 1 153 1 153 156 263 79.0 1e-70 MADVHNKATRSKNMRAIGTRDTAIEKRIAGLLTAVGFEFRVQDATLAGRPDFVIDAYQCI IFTHGCFWHHHDCYLFKVPATRTDFWLEKIGRNVERDKRNVSQLYAQGWRVLIVWECALR GRMKLNDMELTERLEEWICGGGQAAQIDTQGIHPITVSPPHTA >gi|333596725|gb|GL892087.1| GENE 671 729458 - 730891 1369 477 aa, chain - ## HITS:1 COG:ECs2699 KEGG:ns NR:ns ## COG: ECs2699 COG0270 # Protein_GI_number: 15831953 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 477 1 472 472 755 79.0 0 MQENRSVTVPAPERVEKSTAAVQALLRQLLEMYDAKTLANQLVAHGESHWSPAILKRLLI SDRAGHRLSDGEYRYLHNLLPRPPAAHPNYAFRFIDLFAGIGGIRHGFEAIGGQCVFTSE WNKHAVRTYKANWYCDPDVHQFNADIRDVTLSHKTGVSDEEAAEHIRNTIPAHDVLLAGF PCQPFSLAGVSKKNALGRAHGFACDTQGTLFFDVARIIDARRPAIFVLENVKNLKSHDGG KTFRIIMQTLDELGYDVADAEDMGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKGDFT LRDLPSLYPARRPTVADLLEPAVDAKFILTPVLWKYLYRYAKKHQAKGNGFGFGMVNPLN PDSVTRTLSARYYKDGAEILIDRGWDKALGEKDFDDPQNQQHRPRRLTPRECARLMGFET PQGYSFRIPVSDTQAYRQFGNSVVVPAFAAVAKLLASRISKAVQLRQSEAVNGGRSQ >gi|333596725|gb|GL892087.1| GENE 672 730935 - 731636 736 233 aa, chain - ## HITS:1 COG:STM1993 KEGG:ns NR:ns ## COG: STM1993 COG1418 # Protein_GI_number: 16765329 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Salmonella typhimurium LT2 # 1 227 1 227 231 292 68.0 3e-79 MELAQWQQRFEQWLDENHLTDDAAHDIAHFRRVWMTAQSIMAEHTVDPLVVLTACYFHDI VSLAKNHPERSHSSRLAARKTREILSRDFPDFPPDRYAAVEHAIEAHSFSAGIAPQSLEA KVVQDADRLEALGAIGLARVFAVSGALGAALFDADDPFAGTRKLDDKAFALDHFQTKLLR LPDTMQTARGRELARHNADFLIQFMAKLSAELQGDYLGTDSQILTHFRRSVGS >gi|333596725|gb|GL892087.1| GENE 673 731922 - 733085 1395 387 aa, chain + ## HITS:1 COG:STM1473 KEGG:ns NR:ns ## COG: STM1473 COG3203 # Protein_GI_number: 16764819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 387 1 377 377 434 67.0 1e-121 MKRKVLAMLVPALLMAGAANAAEMYNKNGNKVDLYGKVDARHTFSDNPGDDGDETYVQVG FKGETQITNELTGYGQWEYKTYANDTEGAGDRSFNRLAYAGLKFGDYGSFDYGRNYGVVY DVEAWTDMLPVFGGDSYTWTDNFMNGRANGLATYRNNDFFGLVDGLNFALQYQGANEDQF AQEDQEGTKNGHKDVRFQNGDGFGMSTSYDFSGDLSGLSLGAAYSSSDRTNAQEGAGRNN AHYAGGKTAEAWTIGAKYDANNVYLAMMYAETRNMTPYGDYGIADQTQNFEAVAQYQFDF GLRPSLAWVYSKGKDMTYPGYAGNPQGQKDDMDLVNYIDVGMTYSFNKNFSTYVDYKINM LDNDERFYEANGISTDDIVGVGMTYQF >gi|333596725|gb|GL892087.1| GENE 674 733141 - 734004 801 287 aa, chain - ## HITS:1 COG:VC0206 KEGG:ns NR:ns ## COG: VC0206 COG2103 # Protein_GI_number: 15640236 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Vibrio cholerae # 1 285 6 304 305 181 39.0 1e-45 MSITLTGTARERRHASSMNIDRLSTLDMLNVIYQDDAQISSALTPHLSMLARVVDNAAAT LSHGGRLVLTGAGESGRVAEQAAAGFAPGKHPVIAVTAGDHAGSYARGVADLQTIKFGEH DMMLALSVSGKTPWVWGAMRHAWSLGATVAIVTTDAQSEAAQLASMVIAPELGADVVAGY DNTKAGIAQSMIMHMVTTGLAVRTGRVYSNLRVDLEASNTRWAERQIAIVMEAGGCTRAQ AKAALESCNHQCKTAVLMVLTGLDAWKAHELLAQNNGFVRLALQEAP >gi|333596725|gb|GL892087.1| GENE 675 734158 - 735774 1721 538 aa, chain + ## HITS:1 COG:ECs5107 KEGG:ns NR:ns ## COG: ECs5107 COG3290 # Protein_GI_number: 15834361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli O157:H7 # 6 536 6 541 543 634 59.0 0 MSDLQPFPPTRKRPMKLNTLVTLMVCAIIGSVLLVVFALYSVQITRATRDDVKDTALGIA RTLADSPDIKRGLMASPQAGIIQPIAQAVTKRNDLLFTVVTDLRGIRYSHPNEALLGLHF IGDDLTPALEGKENVSVNRGALAEALRVFTPVYDERHDQIGVVVVGISLNKVEDQIARGR LNAVWTILFSVLMSSLAIWGLVRVLKRILFGLEPYEISALFEQRQAMLQSLREGVMAVDI HGRVTMINHTAREILLLTSGEHSESSSEPLLASLREVSRTGIARQDQEIGCNGRLLLCNM VPVKSQNQVIGAISTFRDKTEISQLMQRIDGMVNYVDALRSHTHEFMNKLHVILGLLHMK RYDKLEEYIIQTAQNYQTDIGAIQRKVKSPVIAGFLLGKINRAKEAGVTLTLAEESQLPD TTNEEQVAVLITVLGNLIENALDAMDGQPDGEIGLLLHYQNGWLSGEVSDDGPGIDPERL ESIFTKGYSTKGENRGVGLFLARQQIQNLGGDITVESEPGVFTQFFVQIPWDSERNIA >gi|333596725|gb|GL892087.1| GENE 676 735771 - 736490 295 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 225 1 222 226 118 36 1e-24 MINVLIVDDDAMVADLNRLYVNRVEGFSCCGVASTLNQAEALIANPGQPIDLVLLDVYMQ QDNGLDLLPIIRASGRPIDVIMISSASDAATIQTSMHYGVVDYLIKPFQFPRFEEALNGW KAKRSLMGSHQYYEQADVDRLIHGGAPELADSKKLPKGLTPQTLRTICQWIDSHPEMEFS TDDLANAVNISRVSCRKYLIWLAQINILFTSIHYGATGRPVYRYRLQPEQVGLLKQYCQ >gi|333596725|gb|GL892087.1| GENE 677 736471 - 737433 1121 320 aa, chain - ## HITS:1 COG:SPy1138 KEGG:ns NR:ns ## COG: SPy1138 COG1477 # Protein_GI_number: 15675115 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 14 305 9 308 312 238 42.0 2e-62 MPDDTRVYSYSAVLMGSPILLKLFSHDEALASRVFRLMKQYEDLLTVNRAHSQVMDVNHA AGQHPVAVSRPVFDLIRCAKAASLVKDSAFNLAIGPLVKRWKIGFKGDAVPPTDEIAALL GITDPADVVLDEANSSVFLTRQGMEIDLGAIAKGYIADRVRDYLHKEGVERGLINLGGNV QTLGSPEGGWRVGLKKPFAGDELIGAMTVENRSIVTSGTYERYFEQNGKRYHHILDPRTG YPLDNELDSVTIISKDSLDGDIWTTLIYGMGVEKGCAALRSHPDIEAIFVTKTKEVVISS MHHFRFTLLDDSYRITGSTV >gi|333596725|gb|GL892087.1| GENE 678 737491 - 740271 3775 926 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 445 925 21 500 502 476 51.0 1e-134 MSTNERILSPFTLPNGTELKNRLLMAPMTTCTGYYDGTVTSELVEYYRARAGSIGTIIVE CCFVDDLGLAFPGAIGIDNDEKIAGLAKIADAIKSKGSKALLQIYHGGRMVDPKLIGGRT PVGPSAVAAPRDGAATPVALTAEEVEGMIGKFGEAVRRAIQAGFDGVEIHGANTYLIQQF YSPNSNQRDDEWGGSRDNRAKFPLAVLDITHKMVRQYADDAFIIGYRFSPEELEVPGIRF EDTMYLLEKLAARGVDYLHFSVGATLRPSIVDTQDPTPLIEKYRAMRSETLAQVPVMGVG GVVNASDVNDALDHGYDLIAVGRATIAYPDWTDRIAAGESLELFMDSTKREELSIPEPLW RFSLVEAMIRDMSMGESKFKPGTFTEKVQDDVNELVINVSLETDRIADIELASGPSEDVA FVTSFEEIRTRILDANTPHVDAITGATSQSEAVKKAVSKAMLKSSKALAAEEGADPNETR SVDVVVVGSGGAGLAAAIQAHDEGASVLIVEKMPTIGGNTIKASAGMNAAETRFQRVKGI QDSKDLFYQESLKGGGNKNNPELLRRFVENAPQAIEWLATRGIMLNDITTTGGMSIDRTH RPKDGSAVGGYLISGLVRNVNKRNIEVMLDTSVSDILFENGEVTGVRLTTEENETVNVAT KSVIVATGGFSANSQMVVKYRPDLEGFVTTNHKGATGGGIALLERIGAGTVDMGEIQIHP TVEQKTSYLISESIRGGGAILVNQQGSRFYNEMSTRDKVSAQIIALPEKYAYIVFDEHVR AKNKAADEYIAKGFVTSASSPKALAEALGMDHHQFLATLERYNGFVEKQHDDDFGRTTAL RAPINEGPFYAIQIAPGVHHTMGGVTINTDTCVLDSNHNVLPGAFAAGEVVGGIHGGNRI GGNAVADIIIFGTLAGHQAAMRSKTR >gi|333596725|gb|GL892087.1| GENE 679 740880 - 742388 2178 502 aa, chain + ## HITS:1 COG:STM0618 KEGG:ns NR:ns ## COG: STM0618 COG0471 # Protein_GI_number: 16763995 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 29 500 14 485 487 450 50.0 1e-126 MNTKTAVTPPAANLASNGTAKRLLMMALPVIVAVLLLFVPVPEGLPPYAWHYFAIFVGVI VGLIFEPLPGAVIGLTGVVAIALCSQWVLFSPDQLADPKFKLAGASFKWAVSGFGNSTVW LIFGAFMFAAGYDKTRFGRRLALILVKYLGRRSLTLGYAITFADLLLAPFTPSNTARSGG TIYPIIANLPPLYGSKPNDPSARKIGSYLMWVAITAACITSSMFLSALAPNLLALALVKS TVGIDISWGTWFLAFLPLGILLILTMPLLAYWFYPPEVKVNNEVPLWATRELEKLGKLSR NEILLLVFVCCALLMWIFAAAWIEPAMAALLIVGLMLWTGVLEWNDITGNKAAWNTFVWF ATLVALADGLSSTGFISWLGKEGGLLMSGISPGVATIILLLAFYLLHYLFASTTAHTTAL LPAMLTIASTIPGMNMDVFVLLMVTSLGVMGIITPYGTGPSPIYYGSGYLPTKDYWRLGT IFGAIFLAALLLIGYPWMSMMF >gi|333596725|gb|GL892087.1| GENE 680 742442 - 744091 479 549 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 189 31 5e-46 MSNKPFFYQNPFPLSHDDTEYYLLTKEHVSVAEFDGQEVLKVEPEALTLLAQQAFHDAAF MLRTSHQKQVAAILSDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIMGKKGQR VWTGGGDEAALSQGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYSVDGDEYKF LCMAKGGGSANKTYLYQETKALITPAKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAEA TLKTVKLASTRYYDALPTEGNAHGQAFRDVQLEQELLQEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPIGMGVSCSADRNIKAKINRDGIWIEKLEHNPGQYIPESLRQQGEGDVVS IDLNKPMHDILAQLSAHPVSTRLSLNGTIIVARDIAHAKLKELLDNGEALPQYVKDHPIY YAGPAKTPEGYASGSLGPTTAGRMDSYVDLLQSHGASMIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQNSIKSLECVAYPELGMEAIWKIEVENFPAFILVDDKGNDFFQQIQN KQCQGCSQR >gi|333596725|gb|GL892087.1| GENE 681 744080 - 745069 991 329 aa, chain - ## HITS:1 COG:SMa1782 KEGG:ns NR:ns ## COG: SMa1782 COG0583 # Protein_GI_number: 16263436 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 36 277 1 242 297 85 25.0 2e-16 MAQEGLQFKNPRSIIKSALWGKIPRKNCVENDVASLIYSFAQLEAFTAVAEHGSLMKAAS KLGKDRTTLRDLIDFLEDGLGYALFLREGRSLRLTPEGEQLQRQAHLLMRQVKAFEAFAR TVPDSATQEIALVYDPFTPRAFLQALIATLAAKNIRLSLTSASRDEAEAMLANGQADVGI CQARNRSVGNEMEWRALGAIEMDFYAATTLFAKASSPVSLLDLSLVPQIIMHAASDEPVA RRLQISGHTLFTNELEMLRGLLELGCGWGFLPTHLHATQWQNVKRLPTEVGSQGISQTMV TIWKPGSDKRGVINETLSLLPALWKSSAL >gi|333596725|gb|GL892087.1| GENE 682 745081 - 746376 1426 431 aa, chain + ## HITS:1 COG:PA5542 KEGG:ns NR:ns ## COG: PA5542 COG1680 # Protein_GI_number: 15600735 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Pseudomonas aeruginosa # 38 431 32 414 414 238 36.0 2e-62 MKIKTNRTLLAALVVSSLLSPAVFAACNGTDLTTCPAPFDARLPDAHTMLTWSQADRVVG FRNDYRNYAGDVFRHGNATPLLPAEKPLTDARYQVKGKIYNLQDYLKRQNVSGMLVLKNG KVAYKYLGEGNTDSTLWTSRSVGKSVVSALVGVAIKEGKIHSLDDLITQYEPDLKGTAWD GVTLKQLITHTSGVAWSEDYTNPQSDFARLTECEAKPGTYDCVRTLVKGLHREHPAGENW SYSSGGAWLLGDVLERATGMTLAAYLEKTIWQPYGMASDGVWHAYSKGQHDVGAHGFNAT LEDWGRFGEFILHNGTLPDGKPILPDGWVKQSSTWTQAKGSVSAAHPKGLYGYQWWNNEV PVTATHVEPTVENSLKDSLWALGIFGQMIMVNQKENLVIVQWSTWPQAEPSFSAQPLEAS LMFSAIANALR >gi|333596725|gb|GL892087.1| GENE 683 746637 - 747938 1667 433 aa, chain + ## HITS:1 COG:STM0689 KEGG:ns NR:ns ## COG: STM0689 COG0477 # Protein_GI_number: 16764059 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 2 422 1 422 434 528 68.0 1e-150 MVSSTSPATVRAKAGAIFRVTSGNFLEQFDFFLFGFYATYIAHTFFPASSEFASLMMTFA VFGAGFLMRPIGAIVLGAYIDKVGRRKGLIVTLSIMAAGTFLIVLIPSYQSIGLWAPLLV LTGRLLQGFSAGAELGGVSVYLAEIATPGRKGFYTSWQSGSQQVAIMIAAAMGFALNVLL EESAIREWGWRIPFLFGCLIVPFIFFLRRKLEETEEFCARRHHLAMRQVFSTLLANWQVV FAGMLMVAMTTTAFYLITVYAPTFGKKVLMLSASDSLLVTLLVAVSNFIWLPVGGALSDR FGRKPVLIAMTLLALATSYPALTMLAAAPSFSMMLTVLLWLSFLYGLYNGAMIPALTEIM PTEVRVAGFSLAYSLATAVFGGFTPVISTALIEYTGDKASPGYWMSFAAVCALLATLYLY RRRTLTLQTAVEE >gi|333596725|gb|GL892087.1| GENE 684 747945 - 748733 722 262 aa, chain + ## HITS:1 COG:YPO0080 KEGG:ns NR:ns ## COG: YPO0080 COG0725 # Protein_GI_number: 16120431 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Yersinia pestis # 70 254 88 272 272 120 38.0 3e-27 MLTFRTVIAALTFATLSAGALAQDVTVMISGGFKAALEKLAPQYEAKSGDRIVLISGPSM GKTPQAIPARLARGEKADVVIMVGDALAKLEQDRRTAPGSRVELADSPVGMVVRAGAPVP DISTVPALRQTLLKAHSMAYSDSASDRYVESELFRKLGIDGQVHDKAHRVERIPVASEVA KGKYDLGFQQVSELLPVPGVTFVGKLPDDMQYITRFAGAVTQKADHPEQGKALLAFLSSP QAASVITTTGLMPVSATRDTAQ >gi|333596725|gb|GL892087.1| GENE 685 748705 - 749607 641 300 aa, chain - ## HITS:1 COG:mlr6981 KEGG:ns NR:ns ## COG: mlr6981 COG0583 # Protein_GI_number: 13475811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 278 1 278 299 218 40.0 1e-56 MPVNFDLNDLYAFRALLEYGNFRLAAESICLSQSALSRRIEKLEAALGAKLFDRTTRRVT LTLYGQTFADRCGQLLADVESMLSDIDKASEERTGLITVATVPSAACYFMPDVIRRFQSR YPRVRIKLIDSSAGNVIEAVTRGQADFGICFAQSLQPDIEFVPLVEDVYVAACRRDSPLA KRKSLTWQAFYQQDYIGLDKTSGNRNLLDQRVGHIRPERPSICETRHVTTMLGMVEAGIG IAAVPAMSMPRAEHSLLTSVPLTEPEVRRTVGLIRRRGRIQSYIAAELETLITEQYRELH >gi|333596725|gb|GL892087.1| GENE 686 749874 - 750671 850 265 aa, chain + ## HITS:1 COG:ECs2774 KEGG:ns NR:ns ## COG: ECs2774 COG3228 # Protein_GI_number: 15832028 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 14 278 278 453 83.0 1e-127 MIKWPWKTNEAGRNMALPWDEALAIPVLANLLPEEQSRLIQLAERFLQQKRLVPLQGFEL DPLKNSRIALLFCLPVLELGIEWLDGFHEVLIYPAPFIVDDEWEDDIGLVHNQRMVQSGQ SWQQGPIILNWLDIQDSFDASGFNLIVHEVAHKLDTRNGDRASGVPLIPLREVAGWEHDL HAAMENIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQ FYQQDPLQRLRQSEDAASTSSHPFH >gi|333596725|gb|GL892087.1| GENE 687 750668 - 751876 1153 402 aa, chain - ## HITS:1 COG:YPO0988 KEGG:ns NR:ns ## COG: YPO0988 COG0477 # Protein_GI_number: 16121292 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 3 400 9 402 407 388 65.0 1e-108 MRARTENLTDVVAPKANWPLALGAGLLGIGQNGLLVMLPQLVSLTGLSLSVWAGLLMFGS MLFLPASPWWGRQSERHGCKVVMLASLGGYLASFVVMALVVWAMANGALNAFWGMAGLVL SRMLYGLTVSGLVPAAQTWAIQRAGLDKRMAALATISSGLSCGRLLGPPLAALMLSVSPV APLWLMAVAPFIALLLVLREAADPPLPPVAHQSTRLQASMLPFLVLALLLAALVSLMQLG LSPHLHPLFNGDAVQISHHVALLLSLAALATLAAQFLVVRPQHFSPRGLLLLAAVLMVTG LGVMCLASLALFYAGIVLTSLGAAMATPGYQLLLNDRLTTGKGAGVIATSHTLGYGASAL LVPVVTRFYGEQFLITAAWGMALLFFAVSVWVRSTDRTPAEH >gi|333596725|gb|GL892087.1| GENE 688 752015 - 753757 2194 580 aa, chain + ## HITS:1 COG:SMa2404 KEGG:ns NR:ns ## COG: SMa2404 COG4264 # Protein_GI_number: 16263713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Sinorhizobium meliloti # 51 577 47 577 585 243 32.0 8e-64 MRTLPRSAGTDVAAQCFLNALLRETKDWHYLPATRADELSQIHIPLSPTQAIRVPVRYFS PTQHHQYHFPATLIQADSDGGDAVTFHQLIDFILQKESVKGTLDADTLARFRQRVLESHT HTWQAIDLRHNWANLRDTPLTFADAEQALLVGHAFHPAPKSHEPFNEAEARRYLPDFASR FPLRWFAVEHTLIAGDSLNVSLRERLLRFAAQSAPELLGHFTDTRWLLPMHPWQADYLLE QDWCQRLAEKGALRDLGEAGAHWLPTSSSRSLYSETNSDMIKFSLSVRLTNSVRTLSVKE VKRGMRLARLAKTARWQELQARYPTMRVMQEDGWAGLRDENGVVQEESLMALRVNLLFDT PATQTNVLVSLTQAAPDGGDSLLAAAVRRLSQRLDLPLAQAARCWLDAYCDRVLLPLFSA EADYGLVLLAHQQNILVEMQQDFPVGLIYRDCQGSAWTAGADAWLEEAGETGVENRFGDS QLLRYFPYYLLLNSTLAVTAALAAAGFDSEETLMSRVRDALAELRKTAKQTRCLDYVLDS PTWNCKGNFFCYLHDRNENTIADPAVIYFDFSNPFYKEKA >gi|333596725|gb|GL892087.1| GENE 689 753757 - 754704 1225 315 aa, chain + ## HITS:1 COG:YPO0991 KEGG:ns NR:ns ## COG: YPO0991 COG1670 # Protein_GI_number: 16121293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Yersinia pestis # 4 312 5 313 316 447 69.0 1e-125 MAIANIVHSGYGFCCTSTEQNLPLTLGLDGSAVLARLAGLPDGWLVDALDQLFVAAPALT GITLPWAAWQNEPQAQALFSLVHGDYLARDVFWQLPLWLKGERPQASGDMQFDESRQLYF PVRPHRPQGEVYRRYDPQIKRTLSFRVADVALDGERFTRWMNTPRVNAFWEMAGPQAEQE NYLRRQLDSTYCYPVIGCFDDQPFGYFELYWAAEDRIGRHYRWQPFDRGLHMLVGEENWR GAQYIRSWLRGLSHYLYLDEPRTARIVAEPRFDNQRLFRHLASAGFDTVKEFDFPHKRSR LIMSERHRFFHEVEL >gi|333596725|gb|GL892087.1| GENE 690 754734 - 756443 2045 569 aa, chain + ## HITS:1 COG:YPO0992 KEGG:ns NR:ns ## COG: YPO0992 COG4264 # Protein_GI_number: 16121294 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Yersinia pestis # 1 569 16 582 582 836 70.0 0 MVAKILAELEYERTLRAEPVSADGWRISMGNATWQFCATRGIWGWLHIDPDTLTTTSGAA VEAENALLQLATVLEMSDAQTAEHMEDLYATLRGDMQLLQARETLDADALIHLDPDELQC LMRGHPKFIFNKGRRGWGLDALRQYAPEYRGRFRLHWVAVKRAHLVWSSDADCDIHTLLS SAMDDAERERFNARWQGLDLDDSWLPVPLHPWQWQQKIAIHFLAQLARGEMVELGEFGDE YLAQQSLRTLTNASRRAPYDIKLPLTIYNTSCYRGIPGKYIAAGPLASRWLQQQFASDAT LARSGAQVLGEPAAGYLSHPGYAALPKAPYRYQEMLGVIWRENPSCYLQDGEQAVLMAAL METDNQGRPLIDAWIKRSGLNADAWLDKLFEATVLPFYHLLCRYGVALIAHGQNVTLVMK DYVPQRILLKDFQGDMRLVDEDFPQAQSLPEQVKAVTARLSAEYIIHDLQTGNFVTVLRF ISRLTLQSGVSEARFYQILAGVLQRYMAAHPDLAERFVKFDLFKPQIIRVILNPVKLTFS EHDGGSRMLPNYVCDLDNPLFLVSQESAQ >gi|333596725|gb|GL892087.1| GENE 691 756440 - 757738 1455 432 aa, chain + ## HITS:1 COG:YPO0993 KEGG:ns NR:ns ## COG: YPO0993 COG3486 # Protein_GI_number: 16121295 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Yersinia pestis # 5 425 6 426 442 615 69.0 1e-176 MKTYDFIGIGIGPFNLSIAALAEGLDGFSSLFLERKPHFSWHPGMMVPDCHMQTSFLKDL VSAVEPTNRHSFLNYLVQRKKFYRFLTTEQRTVSREEFADYLCWAADNLTNLAFSQQVQQ VRFDEQNGLFEVVTQRDRFLARHVCVGIGKQINLPDCVTAQDDTCFHASEMMLRTPNLAG KRVTVVGGGQSGADLFLNIFRGEWGQPLSLNWVSRRNNYNALDEAAFANEYFTPEYVDSF STLGDDARRQMLHEQKMTSDGITTESLLAIYRAMYHRFEVLREKPWAHLMPSRSVTALTR QETGHRLSIQHHLDGGREQLESDVVIFATGYRAVQPAFLAPLSHRLRLDEDEAFCINNDF TLEWDGPQSNRLFAVNAGMHRLGIAEPQLSLMAWRAARILNRAHADEPFELATTPGVIHW RSTTSPESSQVF >gi|333596725|gb|GL892087.1| GENE 692 757793 - 759982 2994 729 aa, chain + ## HITS:1 COG:YPO0994 KEGG:ns NR:ns ## COG: YPO0994 COG1629 # Protein_GI_number: 16121296 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 1 729 1 726 726 1155 79.0 0 MKRSHLWVLNPCLLAMLSTSAWAEEQKEEDIVVSASRAHRSVAEMAQTTWVIERAEIEQQ VQGGKEIKDVLAQLIPGMDVSSQGRTNYGMNLRGRSMMVMVDGVRLNSSRSDSRQLDSID PFNIDRIEVISGATSLYGGGSTGGLVNIVTKKGQPETEVEFQTGSKSGFNSHNDHDENVS AAVSGGNDNASGRLSVSYQRYGGWYDGNGDEVIIDNTQTGLQYSDRIDVMGTGTINIDDH QQLQLTTQYYKSESDGKHGLYLGENFAAVTGDAKAYNKDNLNSDRIPGTERHLINLQYSN TDFWGQDLVAQIYYRDESLTYYPFPTLSKGTVTSIGASQQKTDFYGGKLTLNSKPMDDLT LTWGVDADHETFDANQQFFDLSKAAASGGMELDNAYNVGRYPGYSITNLAPFLQASYDID AITLSGGVRYQYTENKVDDFVGYAQQQAIATGKATSADAVPGGKTDYNNFLFNAGILGRL TEQQQLWFNFSQGFEIPDLAKYYGSGTYQLVDGHYRLQNSVNVNDSTLDGIKVNAYELGW RFTGDNLRTQVAAYYSLSDKTITINKSDMTINLEDDKRRIYGVEGQVDYFFTDSDWSTGA NFNAIKSETRENGKWEKLTVDSASPSKASAWVNWAPGDWALRVQSTQTFDVSDADGKKID GYNTVDFLGSYALPVGKVSFSVENLLDKDYTTAWGQRAPGLYSPTYGAPGLYTYKGRGRT FGLNYSVLF >gi|333596725|gb|GL892087.1| GENE 693 760515 - 761093 -35 192 aa, chain - ## HITS:1 COG:no KEGG:EFER_3830 NR:ns ## KEGG: EFER_3830 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 187 189 375 376 282 71.0 6e-75 MREMQFLHRSQFDEIQYGSAALKRNARGAILRPVISAHGHFRVLNILFPQVKTHVISHEC FLRGAAITAWADLFRQRHGELWFIEEEIHEAESEIPWTFLRTTQHGWWQTQWQLWGQGKN RRMVCSLTGGDKRNAKILSLTASRNFCHWLYKQAEYSHSTKLSAGRVMQILLSLANEYNH NLTQTLSGTSTG >gi|333596725|gb|GL892087.1| GENE 694 761799 - 763352 1405 517 aa, chain + ## HITS:1 COG:STM4104 KEGG:ns NR:ns ## COG: STM4104 COG0737 # Protein_GI_number: 16767370 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Salmonella typhimurium LT2 # 1 517 1 518 518 923 87.0 0 MNIKAISVGIFLALPFCVGAKDVTFIYTNDLHAHVEPYKVPWIAEGKRDVGGWANITTLV KQEKEKSKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTL LQLSQAKFPVVQGNIFYQNSSKLFWDKPYTIIEKDGVKIGVIGLHGVFAFDDTVSAATRV GIEARDEIKWLQRYLDELKGKVDLTVLLVHEGTPARQSSMGGTDVRRALDKDIQTASQVK GLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYTKPHQFTVKKFELKTIYA DEWKPDPQTKKVIDGWNKKLDEEVQQTVAQSPVELTRAYGESASLGNLAADALLAAAGKD TQLALTNSGGIRNEIPSGPITMGGVISTFPFPNELATMDLTGKQLRTLMEHAASLSNGVL QVSKGLEMKYDSGKPIGQRVVEFTLNGKPIEDATVYHIATQSFLADGGDGFSTFTEGKAR NTRGGYYVSNAVIDYFKAGNTITDEQLHGMRVADVKK >gi|333596725|gb|GL892087.1| GENE 695 763627 - 764505 1018 292 aa, chain - ## HITS:1 COG:ECs2783 KEGG:ns NR:ns ## COG: ECs2783 COG0583 # Protein_GI_number: 15832037 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 292 25 316 316 514 86.0 1e-146 MLYTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMTEPGKALLTIAERILNEASNVRRLA DLFTNDASGVLTIATTHTQARYSLPRVIKAFREIFPDVRLELIQGTPQEIEVLLHNGGAD IGIASERLSNDPLLVAFPWFRWHHSLLLPADHPLNQVSPLTLEEIVKWPLITYRQGITGR SRIDEAFKRKGLTPDVVLSAQDSDVIKTYVELGLGIGLVAEQSGGEYEAGNLVRLDTRHL FDANTVWLGLKRGQLQRNYVWRFIELCNAGLSVDEIKRQVMEPEEVAIDYQI >gi|333596725|gb|GL892087.1| GENE 696 764674 - 765591 1048 305 aa, chain - ## HITS:1 COG:ECs2784 KEGG:ns NR:ns ## COG: ECs2784 COG0583 # Protein_GI_number: 15832038 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 464 82.0 1e-130 MNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGEMDQQLLIRTKRGVTPTEA GKILYTHARTILRQCEQAQLAVHNVGQTLSGHVSIGLAPGTAASSVTMPLLQAVRAELPE VLVYLHENSGSVLNDKLLNGQLDMAVLYDRSPVAGITSQPLLKEDLYLVGTRDCPGQSID LTAVAEMNLFLPRDYSAVRVRVDEAFSLRRLTAKIIGEIDSISTLTAAIASGMGVTVLPE SAARSLCSAANGWMARITTPSMSLPLSLNMSARGSLSPQAQAVKEILMSLVSKPSLENRE LQLVS >gi|333596725|gb|GL892087.1| GENE 697 766073 - 767008 713 311 aa, chain - ## HITS:1 COG:ECs2785 KEGG:ns NR:ns ## COG: ECs2785 COG1376 # Protein_GI_number: 15832039 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 298 1 303 310 449 75.0 1e-126 MRRLKVVGCLAALFFSQYGLAVSYPLPPEGSRLVGAPITITVPEGNTLPLEAFAARHGQG LSNMLEANPGVDPFLPRAGTQLVVPQQLILPPTVREGIVVNVAEMRLYYYPPGSNTVEVL PIGIGQAGRETPRNWVTAVERKQEGPTWSPTPNTRRAYAKEGKTLPAFVPAGPDNPMGLY ALYIGRLYAIHGTNSNFGIGLRVSQGCIRLRNDDIKYLFDNVSVGTRVQLIDQPVKVTTE PDGSRWVEVHEPLSRNRAEFESTNKVPLPISAVQRSQLISEGAGAELERRSGMPVKLAVS AGAALTGPEAP >gi|333596725|gb|GL892087.1| GENE 698 767202 - 768518 1576 438 aa, chain + ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 434 1 434 438 750 91.0 0 MDSTLISARRDEETPSLNRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQISPA MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFASI GWWAPVLLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGL VSLISQLTTDEQFLSWGWRIPFIFSIVLVVVALWIRNGMEESAEFEQQQREKPVAKKRLP VMEALVQHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLVVGGISC LTIPCFAWLADRFGRRRVYITGALIGTLSAWPFFMALEAQSVFWIVFFAIMLANIAHDMV VCVQQPMFTELFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTFSGGNWHSVAIYLLV GCLLSAATALLMKETVHS >gi|333596725|gb|GL892087.1| GENE 699 768595 - 770049 1694 484 aa, chain + ## HITS:1 COG:ECs2779 KEGG:ns NR:ns ## COG: ECs2779 COG0775 # Protein_GI_number: 15832033 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 929 92.0 0 MNNKGSSLTPAQALEKLDALYEQSVNALRSAISDYIETGKLPDEKARTQGLFVYPSLSVT WDGSASSNPKTRAYARFTHSGCYSTTITRPALFRPYLEEQLTLLYQDYGAQISVEPSLHE IPYPYVIDGSALTLDRSMSAGLTRHFPTTELSQIGDETADGIYHPAEFSPLSHFDARRVD FSLARLRHYTGTPAEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGIWIT AETEAPEEAISDLAWKKHQMPAWHLITADGQGITLINIGVGPSNAKTICDHLAVLRPDVW LMIGHCGGLRESQLIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKMVSG MPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDKLHSRKLRTFNE PPFR >gi|333596725|gb|GL892087.1| GENE 700 770360 - 771778 1368 472 aa, chain - ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 3 464 77 538 547 715 82.0 0 MRTPWYAKRKSYRVLFWREITPLAVPIFLENTCVLLMGVLSTFLVSWLGKEAMAGVGLAD SFNMVVMSFFAAIDLGTTVVVAFSLGKLDPKRAREAARQSLMIMTLFSIILAAVIHYYGK EIIDFVAGEATSEVKELALTYLEMTVLSYPAAAIALIGSGALRGAGNTKIPLLINGGMNI LNIIISSILIYGVFSWDGLGFVGAGLGLTISRYIGAAAIIGVLMAGITPSLRLTLKSYFR PLNFAIIWEVMGIGIPASIESVLFNGGKLLTQMFVAGMGTDVIAGNFIAFSIASLINLPG NALGSASTIITGRRLGKGQIGQAERQLRHVFWLSTIGLTAIAWGTAPFAGLMASFYTHEN DVKEVVKVLIWLNAAFMPIWAASWVLPAGLKGARDARFAMWVSMLGMWGCRVVAGYTLGV MLGMGVVGVWLGMFLDWAVRGALFYWRMVSGRWLWKYPRKKPEQEVSETANA >gi|333596725|gb|GL892087.1| GENE 701 772220 - 772555 516 111 aa, chain - ## HITS:1 COG:ECs2809 KEGG:ns NR:ns ## COG: ECs2809 COG2926 # Protein_GI_number: 15832063 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 23 131 131 168 95.0 2e-42 METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEA IQGIIASMKSDYEDRVDDYIIKNAELSKERRDISKKLKVMGEIKNVDAKGE >gi|333596725|gb|GL892087.1| GENE 702 772703 - 773761 855 352 aa, chain - ## HITS:1 COG:STM2060 KEGG:ns NR:ns ## COG: STM2060 COG1289 # Protein_GI_number: 16765390 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 352 1 352 352 606 84.0 1e-173 MRPDKSLTPFEIRLYKHYRVVHGCRIALAFVLTFVLVRVLNIPEGTWPLITLVVVMGPIS FWGNVVPRAFERIGGTVFGSALGLIALKLELISFPIMLLWCAVAMFLCGWLALGKKPYQA LLIGITLAVVVGAPAGDMTTALWRSGDVILGSLLAMLFTGIWPQRAFLHWRIQMANYVTA FNRVYQAGFSPNLIERPRLEKHLQKILNDVVKMRGLITPASKETHIQKAIFEAIQTVSRN LVCMLELQINAHWASRPSHLLMLNAHTLKETQQMTQQTLLTIAHALYEGNPQPIRANSER LNEIVAELKQLMNERQGDNVAETPIHGYVWLSMELARQLELLSQLICRALRK >gi|333596725|gb|GL892087.1| GENE 703 773853 - 774326 445 157 aa, chain - ## HITS:1 COG:ECs2811 KEGG:ns NR:ns ## COG: ECs2811 COG3449 # Protein_GI_number: 15832065 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 155 1 155 157 240 71.0 6e-64 MDYSIRQQQKRTIAGFHLVGPWEKTVKQGFEQLVMWVDGRHIQPQEWVAVYYDNPDDVPA EKLRCDTAVTVPEGFTVPENSEGVMMTEIAAGEYAVAAARVENHDFATPWNQFFNSLLQD NTYQIAPKPCFERYLNDGNADGYWDIEMFVPVEHKVR >gi|333596725|gb|GL892087.1| GENE 704 774445 - 775488 1141 347 aa, chain - ## HITS:1 COG:STM2062 KEGG:ns NR:ns ## COG: STM2062 COG1686 # Protein_GI_number: 16765392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Salmonella typhimurium LT2 # 1 346 44 389 390 648 89.0 0 MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKGNPV FDGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADHVAGGQPQFVRMMNDYVEKLNL RDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQQN FDTVQILHNGKKVGSERIWYGDKEQIALGTDQDFWLALPKTEVPNIKAKYVMDKKELEAP IAAHQRVGEIQLYDRDKVVAHWPLVTLERVEKGGLFSRLGDYLHHKL >gi|333596725|gb|GL892087.1| GENE 705 775809 - 777245 1613 478 aa, chain + ## HITS:1 COG:ECs2813 KEGG:ns NR:ns ## COG: ECs2813 COG2925 # Protein_GI_number: 15832067 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Escherichia coli O157:H7 # 4 478 1 475 475 857 85.0 0 MRLLVSDSAARPTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNIIGEPEVFYCKPADDY LPQPGAVMVTGITPQEARDKGVSEAEFARRIHDLFTVPNTCVVGYNNIRFDDEVTRNIFY RNFYDPYAWSWQNRNSRWDLLDIMRACYALRPEGIHWPENEDGLPSFRLEHLTRANGIEH SNAHDAMADVYATIAMAKLVKTAQPRLFEYLLSHRSKQKLMTLIDVPQMKPLVHISGMFG AWRGNTSWVAPLAWHPDNRNAVIMVDLAGDISPLLELDSDTLRERLYTPKEALGDLPAVP VKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRDNPQVREKVVAIFAEAEPF VPSENVDAQLYNGFFSDADRAAMNIVLQTDPRNLPALDITFADKRIEKLMFNYRARNYPG TLDEAEQERWLQHRRNVFTPEFLSSYAQELEMLYGQYEGNAEKQALLKALYQYAQEIV >gi|333596725|gb|GL892087.1| GENE 706 777367 - 778725 1844 452 aa, chain - ## HITS:1 COG:STM2068 KEGG:ns NR:ns ## COG: STM2068 COG0531 # Protein_GI_number: 16765398 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 452 3 454 454 745 88.0 0 MSHNATPNTSRVELRKTLTLIPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVATAYAFALV AILFTALSYGKLVRRFPSAGSAYTYAQKSISPAVGFMVGWSSLLDYLFMPMINILLAKIY FEALVPSVPSWIFVVALVAFMTISNLRSIKTVANFNTLIVILQMGIVAVIVGLIIYGVSH GEGAGTLTSTRPFWSEGAHVVPMITGATILCFSFLGFDGISSLSEETKDAERVIPKAIFL TALIGGLIFIGASYFLQLYFPDISRFKDPDASQPEIMLYVAGKTFQWGVLIFSSVTVLAS GMAAHAGVSRLMYVMGRDGVFPTRFFGYVHPKWRTPAWNVLLVGAIALLAIKFDLVTATA LINFGALVAFTFVNLSVISQFWIREKRNKTLKDHINYLVLPVCGALTVGALWINLEESSM VLGLIWGAIGLIYLACVTRSFRNPVPQYEDVA >gi|333596725|gb|GL892087.1| GENE 707 778997 - 779938 803 313 aa, chain - ## HITS:1 COG:ECs2817 KEGG:ns NR:ns ## COG: ECs2817 COG0583 # Protein_GI_number: 15832071 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 2 311 5 314 316 540 83.0 1e-153 MGAKMKPLLDVLVILDALEKEGSFAAASAKLYKTPSALSYTVQKLESDLNIQILDRTGHR ARFTRTGQMLLEKGRDVLHTVRELEKQAVKLHQGWENELVIGVDDTFPFSLLTPLIEAFY QRHSVTRLVFINGVLGGSWEALTQGRADIIVGALHEPPQLSEFGFARLGVLEQIFAVAPH HPLANEPEPVTRRVIKNYRAIVVGDSSRPECGISSQLLDEQEAITVFDFKTKLELQISGL GCGYLPRYLAQRFIDSGALVEKQVLAQSSNESVWVGWNEQTAGLASAWWRDEILANSAIA TVYTQADDGKSTS >gi|333596725|gb|GL892087.1| GENE 708 779968 - 780792 741 274 aa, chain - ## HITS:1 COG:ECs2818 KEGG:ns NR:ns ## COG: ECs2818 COG0451 # Protein_GI_number: 15832072 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 444 82.0 1e-125 MKKVAIVGLGWLGMPLAMSLAAKGWQVTGSKTTRDGVEAARMCGIDGVELRLEPELICDT DELDELMNVDALVITLPARRSGPGETFYLQAVQEIVDSALAHHIPRIIFTSSTSVYGDID GTAKENTERRPVTASGRVLKELEDWLHNLPGTQVDILRLAGLVGPGRHPGRFFAGKSAPD GQHGVNLVHLEDVIGAIELLLQAPKGGHIYNICAPSHPPRSTFYPLMARQLGLAPPVFSE AQGERKGKIIDGNRICHELGFEYQYPDPLVMPME >gi|333596725|gb|GL892087.1| GENE 709 781160 - 782059 1263 299 aa, chain + ## HITS:1 COG:hisG KEGG:ns NR:ns ## COG: hisG COG0040 # Protein_GI_number: 16129960 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 299 1 299 299 555 95.0 1e-158 MLDNSRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIALAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLTRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPA ALNGKRIATSYPHLLKRYLDQKGVQFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMAEAKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLEE VIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME >gi|333596725|gb|GL892087.1| GENE 710 782065 - 783369 1305 434 aa, chain + ## HITS:1 COG:hisD KEGG:ns NR:ns ## COG: hisD COG0141 # Protein_GI_number: 16129961 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Escherichia coli K12 # 1 434 1 434 434 716 88.0 0 MSFNTIIDWNTCSDAQQRELLMRPAISASESITRTVAEILDNVKARGDDALREYSAKFDK TEVGALQVTAQEIAGAESRLGDEIKQAMAVAVKNIDTFHTAQKLQAVDVETLPGVRCQQV TRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCQKVVLCSPPPIADEILYAAKLCGVQA IYKVGGAQAISALAFGTESIPKVDKIFGPGNAYVTEAKRQVSQRLDGAAIDMPAGPSEVL VIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADMAKRVGDAVERQLADLPRAETARQ ALSASRLIVARDLDQCIAISNQYGPEHLIIQTRNARDLVDSITSAGSVFLGDWSPESAGD YASGTNHVLPTYGYTSTCSSLGLADFQKRMTVQELSREGFASLASTIETLAAAERLTAHK NAVTLRVAALKEQA >gi|333596725|gb|GL892087.1| GENE 711 783366 - 784427 1318 353 aa, chain + ## HITS:1 COG:hisC KEGG:ns NR:ns ## COG: hisC COG0079 # Protein_GI_number: 16129962 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli K12 # 1 353 4 356 356 632 86.0 0 MNIEELARENVRRLTPYQSARRLGGNGDVWLNANEYPTAVAFELSQQTLNRYPECQPKAV IENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAVMYCQPTYGMYSVSAETFGVA CRNVQALDNWQLDLQGIADNLDGVKVVFVCSPNNPTGQIIHPQDIRTLLEMTRGKALVVA DEAYIEFCPQATLAGWLEEYPHLVVLRTLSKAFALAGLRCGFTLANKAVIDLLLKVIAPY PLSTPVADIAAQALAPQGISAMRKRVAQILEERQYLVDALKTIPCVEQVFDSETNYILVR FTASSAIFKSLWDQGIILRDQNKQPTLSGCLRITVGTRAESQRVIDALKAEKV >gi|333596725|gb|GL892087.1| GENE 712 784424 - 785491 1525 355 aa, chain + ## HITS:1 COG:hisB_2 KEGG:ns NR:ns ## COG: hisB_2 COG0131 # Protein_GI_number: 16129963 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Escherichia coli K12 # 149 355 1 207 207 404 92.0 1e-112 MSQKYLFIDRDGTIISEPPSDFQVDRFDKLAFEPEVIPVLLKLKKAGYKLVMITNQDGLG TDSFPQADFDGPHNLMMQVLTSQGIAFDEVLICPHMPADECDCRKPKVKLVERYLAEAAL DKANSYVIGDRVTDITLAENMGIAGLRYNRDTLNWAMIGEQLTRRDRYSHVERNTKETQI DVKVWLDREGGSKIHTGVGFFDHMLDQIATHGGFRMEITVKGDLYIDDHHTVEDTGLALG EALKLALGDKRGINRFGFVLPMDECLARCAMDISGRPHLEYKADFTYQRVGDLSTEMVEH FFRSLSYTMGLTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDALPSSKGVL >gi|333596725|gb|GL892087.1| GENE 713 785491 - 786081 674 196 aa, chain + ## HITS:1 COG:hisH KEGG:ns NR:ns ## COG: hisH COG0118 # Protein_GI_number: 16129964 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 386 92.0 1e-107 MNVVILDTGCANLNSVQSAIMRHGYEPVVSRDPDVVLRADKLFLPGVGTAQAAMDQIHER ELVDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIEEDVPKMTDHGLPLPHMGWNR VYPKAGNRLFQGIEDGAYFYFVHSYAMPVNTCTIAQCNYGEAFTAAVQKDNFYGVQFHPE RSGAAGAQLLKNFLEM >gi|333596725|gb|GL892087.1| GENE 714 786081 - 786818 695 245 aa, chain + ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 434 91.0 1e-122 MIIPALDLIDGTVVRLHQGDYGQQRDYGNDPLPRLQAYAAEGAEVLHLVDLTGAKDPAKR QIPLLKTLVAGVNVPVQVGGGVRTEDDVAALLDAGVARVVVGSTAVKDPESVQGWFRRFG ADALVLALDVRIDAQGNKQVAVSGWQENSGVTLEELVEMYLPVGLKHVLCTDISRDGTLA GSNVSLYEEVCARYPQVAFQSSGGIGDLADIAALRGTGVRGVIVGRALLEGKFTVKEAIQ CWQNG >gi|333596725|gb|GL892087.1| GENE 715 786800 - 787576 934 258 aa, chain + ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 498 94.0 1e-141 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV VDKSWVARVAEVIDIPFCVAGGIKSADDAAKILSFGADKISINSPALAEPELITRLADRF GVQCIVVGIDTWFDAATGKYHVNQYTGDESRTRITQWETLDWVQEVQKRGAGEIVLNMMN QDGVRNGYDLEQLKKVRAVCHVPLIASGGAGTMEHFLEAFRDANVDGALAASVFHKQIIN IGELKTYLADQGVEIRVC >gi|333596725|gb|GL892087.1| GENE 716 787570 - 788181 634 203 aa, chain + ## HITS:1 COG:hisI_1 KEGG:ns NR:ns ## COG: hisI_1 COG0139 # Protein_GI_number: 16129967 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli K12 # 1 112 1 112 112 211 86.0 1e-54 MLTEQQQAQLDWEKTDGLLPVVVQHAVSGEVLMLGYMNQEALAKTLDSGKVTFFSRTKQR LWTKGETSGHFLNMVSITPDCDNDTLLVLVNPIGPTCHKGTSSCFGEASHQWLFLYQLEQ LLAERKSADPESSYTAKLYASGTKRIAQKVGEEGVETALAATVHDREELTNEASDLMYHL LVLLQDQELDLTTVIENLRNRHK >gi|333596725|gb|GL892087.1| GENE 717 788220 - 789200 807 326 aa, chain - ## HITS:1 COG:STM2079 KEGG:ns NR:ns ## COG: STM2079 COG3765 # Protein_GI_number: 16765409 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Salmonella typhimurium LT2 # 1 326 1 326 327 376 65.0 1e-104 MTQNNNNLVTRSNDPEQIDLLDLMLQLWRGKWVIGAFVAALIVLAGVYITVAKEKWTSSA IIAQPDAAQIATYSNALNILYGGAAPSMMDIQNRAIGRFNTSFSALAQALENQDAPEKLI IEPTVKGQSLPLTVSYQSDSAEAAQKQLAQYIQQVDEQTAKELTLDLRDNLKQQITTLND SLQNQEKVAQEQKDLRIKQISEALKDAEAAKISTPQLQQTQDVTQETMFLLGTVALKSMV DNEASRPLIFPGSYYQTKKNLLDIQNLNIIPDTIHVYRYVMKPNLPIYRDSPKKAITLIL AVLLGGIIGSAVVLGRNALRNYKPRA >gi|333596725|gb|GL892087.1| GENE 718 789395 - 790399 1151 334 aa, chain + ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 1 334 1 335 343 443 62.0 1e-124 MKFLVTGAAGFIGSHVSKRLLDAGHEVVGIDNLNDYYDPNLKLARLELLKSESFAFHKLD LADREGMANLFAEEKFDRVIHLAAQAGVRYSLENPHAYADANLVGHLNVLEGCRHNKVQH LLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMSHTYSHLYNLPTTGLRFFT VYGPWGRPDMALFKFTKAMIEGNSIDVYNYGKMKRDFTYIDDIAEAIIRLQDVIPQADAD WTVETGSPATSSAPYRVYNIGNSSPVELMDYITALEEALGKEAVKNMMPIQPGDVLETSA DTKALYDVIGFTPQTSVKEGVKNFVDWYRNFYNV >gi|333596725|gb|GL892087.1| GENE 719 790449 - 791615 1606 388 aa, chain - ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 646 82.0 0 MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNQKKSPIVDKEIEEYLATKPLN FRATTDKEDAYRDADFVIIATPTDYDPKTNYFNTSTVEAVIKDVTAINPNAVMIIKSTIP VGFTKSIKEELGIDNVFFSPEFLREGRALYDNLHPSRIVIGERSERAERFAALLQEGAIK KDVPVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQAVPNNLISAIVDANRTRKDFISDSILARQPKVVG VYRLIMKSGSDNFRASSIQGIMKRIKAKGVQVIIYEPAMQEDEFFHSRVIRDLDAFKKEA DVIISNRMAEELADVKDKVYTRDLFGSD >gi|333596725|gb|GL892087.1| GENE 720 791855 - 792736 562 293 aa, chain - ## HITS:1 COG:rfbA KEGG:ns NR:ns ## COG: rfbA COG1209 # Protein_GI_number: 16129979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 290 1 290 293 518 84.0 1e-147 MTKRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQD TPRFEQLLGNGNQWGLHIQYKVQPSPDGLAQAFILGEEFIGEDNCALVLGDNIFYGHDLP RLLEGAASQQEGATVFAYHVSDPERYGVVEFDKDGTAIGLEEKPQQPKSNYAITGLYFYD NDVIEMAKSLSPSERGELEITDINRIYMQQGRLSVAMMRRGYAWLDTGTHQSMIEASNFI ATIEERQGLKVSCPEEIAFRRGFIDAEQLRILAEPLKKTGYGQYLLNLTKGLV >gi|333596725|gb|GL892087.1| GENE 721 792737 - 793723 399 328 aa, chain - ## HITS:1 COG:rfbB KEGG:ns NR:ns ## COG: rfbB COG1088 # Protein_GI_number: 16129981 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli K12 # 1 328 34 361 361 562 82.0 1e-160 MTYAGNLESLREVSDSERYVFEYADICDKEAMARIFATHQPDAIMHLAAESHVDRSITGP AAFIETNIVGTYILLETSRAYWSSLDEAAKSAFRFHHISTDEVYGDLPHPDEHYDSTPLP LFTEKTAYQPSSPYSASKASSDHLVRAWIRTYGLPGIVTNCSNNYGPYHFPEKLIPLVIL NALDNKPLPIYGKGDQIRDWLYVEDHARALYTVLTTGKPGETYNIGGHNEKKNIEVVQTI CDLLDDMVPKETSYRAQITYVADRPGHDRRYAIDAHKISDELGWTPLETFESGIRKTVKW YLNNQEWVSNVKSGAYKSWIEQNYGERK >gi|333596725|gb|GL892087.1| GENE 722 793912 - 795318 1874 468 aa, chain - ## HITS:1 COG:gnd KEGG:ns NR:ns ## COG: gnd COG0362 # Protein_GI_number: 16129970 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli K12 # 1 468 1 468 468 891 95.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSRDKTEEVIAENPGKKLVPFYTVKEF VESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFHDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGPDGAGH YVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAETFTEWNKGELNSYLIDITKDIFT KKDEEGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKEQRVAAS KVLSGPQAKPAGDKAEFVEKVRRALYLGKIVSYAQGFSQLRAASDENNWDLNYGEIAKIF RAGCIIRAQFLQKITDAYAENAGIANLLLAPYFKQIADEYQQALRDVVAYAVQNGIPVPT FSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGVFHTEWLD >gi|333596725|gb|GL892087.1| GENE 723 795412 - 795963 -11 183 aa, chain - ## HITS:1 COG:PM0286 KEGG:ns NR:ns ## COG: PM0286 COG1087 # Protein_GI_number: 15602151 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Pasteurella multocida # 1 183 155 337 338 247 59.0 8e-66 MVEHILEDLCRSNSEWNITSLRYFNPVGAHPSGLIGEDPHDIPNNILPYITQVAIGRREQ LCIFGDDYDTKDGTGVRDYIHVQDLALGHIAALKRIKKQNKYQVYNLGTGRGYSVLELIH TFEKINRISIPYLITERREGDIAECWSSPALAEQELGWRACKTLDDMLQDAWNFQVKNPN GMK >gi|333596725|gb|GL892087.1| GENE 724 796620 - 797120 -225 166 aa, chain - ## HITS:1 COG:SP0353 KEGG:ns NR:ns ## COG: SP0353 COG0438 # Protein_GI_number: 15900282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 160 168 321 372 87 32.0 1e-17 MPNGVDLDKYHPVEEIQKKFLRSDFNLQNASLIFTMVGRLWDQKNPLLLVQAAQKYLRSN SVSNDIFIFVGDGDLRSQIEKLAAKEISAGRIILLGWRNDIAEILSLSDVFILPSKWEGM PLAILEAQASGLPCIASDIAGNKSLIKDNINGILFQNDSVDSLLAS >gi|333596725|gb|GL892087.1| GENE 725 797648 - 797839 129 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDDLGFIYTRLDEFDDFTVNKISLYTKNKNLKLARNAFINKRFDNDKYVDDFLKIINSLL GKA >gi|333596725|gb|GL892087.1| GENE 726 798565 - 799035 -197 156 aa, chain - ## HITS:1 COG:MJ1064 KEGG:ns NR:ns ## COG: MJ1064 COG0110 # Protein_GI_number: 15669253 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Methanococcus jannaschii # 3 143 39 203 214 85 32.0 4e-17 MYINPLKSHFFGVITIENEGEVIVEDLFRARRGMCINCKGGKIKIGKSVFFNNNVTINCQ QSVSIGDNVLIGEDVKIYDHDHDYRKGNIEKRDSFICSPVSIGHNVWIGSNVLILRGVTI GDNCIVSAGSIVTKSIPSDNILIQKQISEYKQIKLL >gi|333596725|gb|GL892087.1| GENE 727 799097 - 799753 29 218 aa, chain - ## HITS:1 COG:BS_yveP KEGG:ns NR:ns ## COG: BS_yveP COG0438 # Protein_GI_number: 16080485 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus subtilis # 57 181 207 338 384 77 35.0 2e-14 MKFFIGNFSDYRIAVSKEAGDSLFDGDYFIHHCGVPEPKKLIPQEEQDKQNRSSYKIYHI GRDSEAKNYPFILALAESLLETNDIQFYCLGAGLEKIHSEAVRRNINNINFPGFVEDPSY EILLNADLFILPSLWEGLPLSVVEAQKCRIPCLVSKDVTEECNIGLAHFIKLDVHVWKMA IIKYKEYNVNNYEIDNMKFSLENDMRYFKKLYGIKYVN >gi|333596725|gb|GL892087.1| GENE 728 800162 - 800692 -17 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|5739464|gb|AAD50486.1|AF172324_4 ## NR: gi|5739464|gb|AAD50486.1|AF172324_4 O-antigen polymerase Wzy [Escherichia coli] # 3 176 222 395 395 158 52.0 2e-37 MVVSGLVGVLTILESIISSLSFIPYIDQIYKIYIVGDRWGSSAEFDLNTRIAQFITQLPF FFSVFVLLISNQKNILFITAILISCISIITFQFWVISERYQYVTILTTTFYLLSKESTFL LPKRLLFLVLFMLQVIVTAWAFYRFRYMLIPSLAFITYPFLFCFYRTLDLSKLIKV >gi|333596725|gb|GL892087.1| GENE 729 800934 - 801551 51 205 aa, chain - ## HITS:1 COG:CAC2174 KEGG:ns NR:ns ## COG: CAC2174 COG0463 # Protein_GI_number: 15895443 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 8 203 7 209 336 127 40.0 1e-29 MANRTISVSVVIPVYNCETTIKKTIDSVLAQDNLDFEVIIVDDGSTDRSAEIITKYEDAR IRYFYQENSGISSALNYGISQSNAEFIARIDGDDVALPNRLKVQYEILKRNIRVCLVGTA VDYINSQGVIIGRTFPYIFPFSASNILLQQNLYAHPSVMFRKDIFLKAGGYPNELSGICE DYYLWTRMIKFGKMINLSESLTQAS >gi|333596725|gb|GL892087.1| GENE 730 803266 - 804162 1128 298 aa, chain - ## HITS:1 COG:STM2098 KEGG:ns NR:ns ## COG: STM2098 COG1210 # Protein_GI_number: 16765428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 1 295 1 295 297 553 94.0 1e-157 MINLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSK NAVENHFDTSYELEALLEQRVKRQLLAEVQSICPPGVTIMNVRQAQPLGLGHSILCARPV VGDNPFIVVLPDIIIDTASADPLRYNLAAMVARFNETGRSQVLAKRMKGDLSEYSVIQTK EPLETEGQVSRIVEFIEKPDQPQTLDSDLMAVGRYVLNADIWAELEKTEPGAWDRIQLTD AIAELGKKQSVDAMLMTGDSYDCGKKMGYMQAFVNYGLRNLKEGAKFRSRIEKLLANS >gi|333596725|gb|GL892087.1| GENE 731 804337 - 805728 908 463 aa, chain - ## HITS:1 COG:no KEGG:ECL_03366 NR:ns ## KEGG: ECL_03366 # Name: wcaM # Def: putative colanic acid biosynthesis protein # Organism: E.cloacae # Pathway: not_defined # 1 463 1 463 463 856 94.0 0 MLKKITRRRFVSSLSALAAMPLLSPRAVRAATGKTVSVDRYNNHDWIAAFKQAFTEGDTV VVPAGLTCENINTGIFIPDGKTLLIRGALKGNGRGRFVLQEGCKVIGEGEGRTHNITLDV RGSDCVIKGLAMSGFGPVTQIYIGGKKPRVMRNLLIDNINVSQANYAILRQGFHNQVDGA RITNSKFSHLQGDAIEWNVAINDRNILISDHVIDNINCTNGKINWGIGIGLAGSTYDNDY PEQQTVKNFVVANITGSNCRQLVHVENGKHFVIRNIKASNITPDFSKKAGIDNATVAIYG CDNFVIDNVDMVNSAGMLIGYGVIKGDYLSIPQNFKLNDIRLDNRALAYKLRGIQISSGN ATSFVAITNVNMQRATLELHNKPQHLFLRNINVMQEAATGPALKMNFDLRKDVRGKFMAK NETLLSLANIHAVNEKGQSSVDIDRVDQHVVNTERLNFALPHR >gi|333596725|gb|GL892087.1| GENE 732 805741 - 806961 1320 406 aa, chain - ## HITS:1 COG:wcaL KEGG:ns NR:ns ## COG: wcaL COG0438 # Protein_GI_number: 16129984 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 702 84.0 0 MKVGFFLLKFPLSSETFVLNQITAFIDMGYDVEIIALQKGDTQNTHAAYTQYGLEAKTRW LQDEPSGRMNKLRHRASQTLRGLHRASTWRALNMSRYGAEARNLILSAICGQTAQPYRAD VFIAHFGPAGVTAAKLRELGVIEGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDMMLP ISDLWAGRLKTMGCPSEKITVSRMGVDMERFTQRPVKVPGKPLQIISVARLTEKKGLHVA IEACRQLKARGVDFHYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELITSEHSGWLVPENNALAL ADRLAAFSDIDQQTLIPVLQNARQKVEAEFNQQVINRQLASLLQTL >gi|333596725|gb|GL892087.1| GENE 733 806958 - 808238 1612 426 aa, chain - ## HITS:1 COG:wcaK KEGG:ns NR:ns ## COG: wcaK COG2327 # Protein_GI_number: 16129985 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 426 1 426 426 773 87.0 0 MKLLILGNHTCGNRGDSAILRGLLDAINTLKPETEVDVMSRYPVSSSWLLNRPVMGDPLY SQMKQHNNAAGVMGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDA IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDPQFNQLANYVFGHCDAL ILRESVSLDMMKRSEIDTTKVEHGVDTAWLVDHQDDSFQASYAVQHWLDVAAKQKTVAIT LRELAPFDKRLGTTQAAYEKAFADVVNRVLDSGYQVLALSTCTGIDSYNKDDRMVALNLR NLVNDPSRYHVVMDELNDLEMGKLLSACDLTVGTRLHSAIISMNFGTPAIAINYEHKSAG IMQQLGMPEMAVDIRHLLDGSLGAMVGDTLGQLPAINERLAVAVKAEREKGIGMVKSVLD RVREGK >gi|333596725|gb|GL892087.1| GENE 734 808254 - 809732 2107 492 aa, chain - ## HITS:1 COG:wzxC KEGG:ns NR:ns ## COG: wzxC COG2244 # Protein_GI_number: 16129986 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 492 1 492 492 785 90.0 0 MSLREKTISGAKWSAMATIIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDF GIANSIIQRKEISHLELTTLYWLNVGLGIFVFVLVFLLSDAIAGVLHNPDLAPLMRTLSF AFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTVVSAHFWPLAMTAILGYLVNS AVRTLLFGFFGRKIYRPGLHFSLASVSSNLRFGAWLTADSIINYVNTNLSTLVLARILGA SVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPV LLGLMVVASNFVPLVFGEKWNGIIPILQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFN VFKTFLFIPAIIVGGHTAGAIGVTLGFLLVQIVNTVLSYFVMIKPVLGSSYRQYILSLWL PFYLSLPTLAVSYGLGVVLNGHLPLAALLAVQVAAGALAFGVMIVLSRNALVVEMKRQFC RNEKMKTLLRAG >gi|333596725|gb|GL892087.1| GENE 735 809734 - 811074 1580 446 aa, chain - ## HITS:1 COG:STM2103 KEGG:ns NR:ns ## COG: STM2103 COG2148 # Protein_GI_number: 16765433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Salmonella typhimurium LT2 # 1 446 19 464 464 808 87.0 0 MVQRFSDITIMVGGLWAVCWVSGQSFLYMHLLMALIALVVFQMIGGMTDFYRSWRGVKMT TELMLLLQNWTLSLVFSAGLVAFSHDFDNRLVTYLCWYLLTSIGMVVCRSLIRFGAGWLR NRGYNRRFVAVAGDLPVGQVLLDSFRKEPWLGFEVVGIYHDAKPGGVPSDWAGNYEQLID DAKAGKIHNVYIAMQMKDESRIKKLMRELADTTCSVILIPDVFTFNILHSRIEEVNGVPV VPLYDTPLSGINRVLKRVEDIVLSSLILLLISPVLCCIALAVKLSSPGPIIFRQTRYGMD GKPIMVWKFRSMKVMENDKVVTQATQNDPRVTRVGNFLRRTSLDELPQFINVFTGGMSIV GPRPHAVAHNEQYRTLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRIEFDLEYI REWSLWFDIKIVFLTIFKGFVNKAAY >gi|333596725|gb|GL892087.1| GENE 736 811314 - 812684 1980 456 aa, chain - ## HITS:1 COG:ECs2853 KEGG:ns NR:ns ## COG: ECs2853 COG1109 # Protein_GI_number: 15832107 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 857 88.0 0 MEKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEYLKPQTIVLGGDVRLTSESLKLALAK GLQDAGVDVLDIGLSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVRKGARPISGD TGLRDVQRLAEANDFPPVNEARRGSYKQINLQKEYIDHLLGYINVANLKPLKLVINSGNG AAGPVVDALEARFKALNVPVTFVKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIEHGADM GIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVKAA GGEPVMSKTGHAFIKERMREEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVTELLCLKGQ SLGELVRDRMAAFPASGEINSKLAQPAEAIARVEHHFAIHALEIDRTDGISMAFPQWRFN LRSSNTEPVVRLNVESRADTALMEARTKDILALLNQ >gi|333596725|gb|GL892087.1| GENE 737 812794 - 814230 1809 478 aa, chain - ## HITS:1 COG:STM2105_1 KEGG:ns NR:ns ## COG: STM2105_1 COG0836 # Protein_GI_number: 16765435 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Salmonella typhimurium LT2 # 1 341 3 343 343 622 90.0 1e-178 MSQTTLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTVNRLHGVECESPVVIC NEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRSSPDCDPLMLVLAADH VIQQEEAFRDAVRAAIPYAENGKLVTFGIVPDLPETGYGYIRRGSVTPGEGDSVAFDVAQ FVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELEKYRPDILSACEKAMAVVDPDLD FIRVDEESFLACPEESIDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTPEGNVHH GDVISHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGR HEHHIHREVYRPWGKYDSIDAGERYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVT IDGEVKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDIIRFQDRYGRV >gi|333596725|gb|GL892087.1| GENE 738 814234 - 815457 1264 407 aa, chain - ## HITS:1 COG:STM2106 KEGG:ns NR:ns ## COG: STM2106 COG0438 # Protein_GI_number: 16765436 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Salmonella typhimurium LT2 # 1 407 1 407 407 711 85.0 0 MKILVYGINYSPELTGIGKYTGEMVEWMASQGHDVRVITAPPYYPEWKVGERYSSWRYRR EEGAATVWRCPLYVPKQPSTLKRLIHLGSFALSSFFPLMAQRRWKPDRIIGVVPTLFCTP GMRLLGKLSGARTLLHIQDYEVDAMLGLGMAGKGKGGKVAKLASAFERSGLHNVDYVSTI SRSMMNKAQEKGVPAEKVIFFPNWSEVARFRDVTEHDAQALRAQLGLPADQKIILYSGNI GEKQGLESVIDAALQLSEHPWMFVIVGQGGGKARLEKMASERGLTNIRFFPLQSYDALPA LLKMADCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAATELGQLCNSYPGIAVCVE PESVPALVTGIEQALAMPKENTVAREYAERTLEKENVLSQFIADIRG >gi|333596725|gb|GL892087.1| GENE 739 815454 - 815933 477 159 aa, chain - ## HITS:1 COG:ECs2856 KEGG:ns NR:ns ## COG: ECs2856 COG0494 # Protein_GI_number: 15832110 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 159 2 160 160 275 82.0 2e-74 MFLSQEDFATVVRSTPLISIDLIVENERGEFLLGKRTNRPAQGFWFVPGGRVQKDETLTD AFERLTLAELGLQLPMAAGQFYGVWQHFYDDNFSGTGFTTHYIVLGFRLKVSEADLRLPD SQHDDYRWLTPEALLASDNVHDNSRAYFLAERQAEVPGL >gi|333596725|gb|GL892087.1| GENE 740 815936 - 816901 1431 321 aa, chain - ## HITS:1 COG:wcaG KEGG:ns NR:ns ## COG: wcaG COG0451 # Protein_GI_number: 16129992 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 321 1 321 321 622 91.0 1e-178 MTKQRIFVAGHRGMVGSAIVRQLEQRGDVEVIVRTRDELNLLDSKAVQEFFASERIDQVY LAAAKVGGIVANNTYPADFIYENMMIESNIIHAAHLHNVNKLLFLGSSCIYPKMAKQPIA ESELLQGTLEATNEPYAIAKIAGIKLCESYNRQYNRDYRSVMPTNLYGPHDNFHPSNSHV IPALLRRFHEATAENAPDVVVWGSGTPMREFLHVDDMAAASIHVMELDREVWQENTEPML SHINVGTGVDCTIRELAQTIAQVVGYKGRVVFDATKPDGTPRKLLDVTRLHQLGWYHEVS LEQGLASTYQWFLENQHRFRG >gi|333596725|gb|GL892087.1| GENE 741 816904 - 818025 1622 373 aa, chain - ## HITS:1 COG:ECs2858 KEGG:ns NR:ns ## COG: ECs2858 COG1089 # Protein_GI_number: 15832112 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: GDP-D-mannose dehydratase # Organism: Escherichia coli O157:H7 # 1 373 1 373 373 740 96.0 0 MSKVALITGVTGQDGSYLAELLLEKGYEVHGIKRRASSFNTERVDHIYQDPHAANPKFHL HYGDLTDTSNLTRILQEVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLHLGNMDSLRDWGHAKDYVKMQWMM LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP GDVIVQVDPRYFRPAEVETLLGDPTKAHEKLGWKPETTLQEMVSEMVAKDLEAAKKHSLL KSHGYEVAIALES >gi|333596725|gb|GL892087.1| GENE 742 818047 - 818601 292 184 aa, chain - ## HITS:1 COG:wcaF KEGG:ns NR:ns ## COG: wcaF COG0110 # Protein_GI_number: 16129994 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 182 1 182 182 334 89.0 6e-92 MQELNGFSVPKGFRGGSGIKVQLWWAVQATLFAWSPQILYRWRAFLLRLFGAKIGKNVVI RPSVKITYPWKLTLGDYAWVGDDAVLYTLGEITIGANSVVSQKCYLCTGSHDFMSQHFDI TASPIVIGEKCWLATDVFVAPGVSVGDGTVVGARSSVFKSLPANTVCRGNPAVVIRERVE TEKL >gi|333596725|gb|GL892087.1| GENE 743 818618 - 819364 834 248 aa, chain - ## HITS:1 COG:STM2111 KEGG:ns NR:ns ## COG: STM2111 COG0463 # Protein_GI_number: 16765441 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Salmonella typhimurium LT2 # 1 247 1 247 248 424 83.0 1e-119 MFLSVITVAFRNYEGVVKTWRSLRNLARDPSLTFEWIVVDGGSNDGTAEFLEKLNGEFNL RYISEKDKGIYDAMNKGINMAQGRYAIFLNSGDVFHEDVALFARQLARQKEDAMFIGDAL LDFGEGKKVLRGAKPGWYIYHSLPASHQAIFFPMSGLKKQPYDLRYKVSSDYALAASLYK SGYPFRRIKGLVSEFSMGGVSTSNNLELCQDAKNVQRKILRVPGFWAELSYFLRLKTTGK AKALYNKA >gi|333596725|gb|GL892087.1| GENE 744 819381 - 820601 1203 406 aa, chain - ## HITS:1 COG:no KEGG:ECL_03379 NR:ns ## KEGG: ECL_03379 # Name: not_defined # Def: putative colanic acid biosynthesis protein # Organism: E.cloacae # Pathway: not_defined # 1 404 1 404 406 636 97.0 0 MSRSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLYVDKLNLKKLMIALG LGFGLTAFNYIFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNYRKILRFFYI VVGLIVMLAAMEMAQIILTGGSSLMEIISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFF ALALISIWLSIKQFGIKTPKTDAMILAGIVLSGSFSGVMTFILFYLLEWAFQYLNKEAIK KKLPLAIISLTVFLVGVIFAFPYISERLGDLGTEGSSSYYRIIGPLVMVGYSLTHIDGVV RFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVLLTLWYLFKVFKMMINAFGD NQNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITRA >gi|333596725|gb|GL892087.1| GENE 745 820576 - 821793 1548 405 aa, chain - ## HITS:1 COG:wcaC KEGG:ns NR:ns ## COG: wcaC COG0438 # Protein_GI_number: 16129997 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli K12 # 1 405 1 405 405 741 85.0 0 MNILQFNVRLAEGGAAGVALDLHQRALQKGLQSRFVYGYGKGGKKSVSHDNYPQVLKQTP RLTSIANTALFRLFNRDLFGNLNNLYRTVTRTSGPVVLHFHVLHSYWLNLDEVVAFCGKV KAHKPDTRFVWTLHDHWSVTGRCAFTDGCEGWKDNCQKCPTLSNYPPVKIDRAHQLVEGK RQLFRDMLSLGCTFISPSQHVADAFNSLYGAGRCQIINNGIDVATEAILAELTPVAVTVG KPKIAVVAHDLRYDGKTNQQLVRDMMALGDRIELHTFGKFSPFEGANVVNHGFETDKRKL MSALNGMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLEKSGGKTFAENEVLP LVQLPKADIAQAVFGTDLESFRNRSRKAYSGQQMLEEYVSFYQNL >gi|333596725|gb|GL892087.1| GENE 746 821790 - 822281 479 163 aa, chain - ## HITS:1 COG:STM2114 KEGG:ns NR:ns ## COG: STM2114 COG1045 # Protein_GI_number: 16765444 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Salmonella typhimurium LT2 # 3 161 2 160 162 294 91.0 5e-80 MFLEDCRANSWSLRPCCMVLAYRIAHFCSVWRKKNVLNNIWAAPVLVLYRIITECFFGYE IQAAATIGRRFTIHHGYAVVINKFVVAGDDFTIRHGVTIGNRGPDSLACPVIGNNVELGA NVVMIGEITVGNNVTIGAGSVVLDSIPDNALVVGEKARVKVIK >gi|333596725|gb|GL892087.1| GENE 747 822281 - 823123 1030 280 aa, chain - ## HITS:1 COG:ECs2864 KEGG:ns NR:ns ## COG: ECs2864 COG0463 # Protein_GI_number: 15832118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 6 280 5 279 279 528 91.0 1e-150 MSTQRPLISIYMPTWNRQQLAIRAIKSVLRQDYDNWELIIVDDCSSSYEQLQKFVEDLND PRVVYTHNAINSGACAVRNQAIMQAKGQYLTGIDDDDEWTPNRLSIFLSHKAQLVTHAFL YANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAA QDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRAS RKYQLFTLYQIRNKRMNWRTLLTLLSVRNGKRLADGLRGK >gi|333596725|gb|GL892087.1| GENE 748 823246 - 825408 2737 720 aa, chain - ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 13 492 492 783 84.0 0 MTEKTRPSAAPTSGSDEIDIGRLVGTVIEAKWWVLGITAIFAVAAIVYTLFATPIYSADA LVQIEQNTGNSLVQDIGSALANKPPASEAEIQLIQSRLVLGKTVHDLGLDIAVTKNTFPV FGAGWDRLMGRSNDTVKVTDFVIPKGAGDQTFTLTVLGPKQYQLTSDAGFSARGEVGQML TKEGVSIKVSAIQAHEGGEFTVTKFSTLGMINNLQNNLTVTENGKDTGVLSMTFTGEDKD QIRDILNSITRNYLEQNVERKSAEAAKSLAFLSKQLPEVRARLDDAENKLNAYRQDKDSV DLPLEAKSVLDSMVNIDAQLNELTFKEAEISKLYTKRHPAYRTLLEKRRTLEEEKAKLND RVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKQQELKITEASTVGDVRIVDPAITQPGVL KPKKALIILGSIILGLMLSIVGVLLRSLFNRGIESPQVLEENGISVYASIPLSEWQKSRD SVKTIKGVKRYKQSQLLAVGNPTDLAIEAVRSLRTSLHFAMMQAKNNVLMMTGVSPSIGK TFVCANLAAVVSQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILLGKGEISESAKPTS IPKFDLIPRGQVPPNPSELLMSERFTQLIEWASKNYDLVLIDTPPILAVTDAAVVGRHAG TTLMVARYAVNTLKEVETSLSRFEQNGIEVKGVILNSIFRRATGYQDYGYYEYEYKSDSK >gi|333596725|gb|GL892087.1| GENE 749 825411 - 825854 562 147 aa, chain - ## HITS:1 COG:STM2117 KEGG:ns NR:ns ## COG: STM2117 COG0394 # Protein_GI_number: 16765447 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Salmonella typhimurium LT2 # 1 147 1 147 149 252 82.0 1e-67 MFNKILVVCVGNICRSPTAERLLKNYQPALTVDSAGLGALVGKGADERAASVALEHNLSL DGHVARQVSGRMCREYDLILAMEKRHIHALCDIAPEMRGKVMLFGHWDGEREIPDPYRKS REAFEAVYTLLDQSARQWAQALKAQQG >gi|333596725|gb|GL892087.1| GENE 750 825861 - 826997 1237 378 aa, chain - ## HITS:1 COG:STM2118 KEGG:ns NR:ns ## COG: STM2118 COG1596 # Protein_GI_number: 16765448 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Salmonella typhimurium LT2 # 1 378 1 379 379 705 93.0 0 MMKSKMKLMPLLVSVTLMSGCTVFPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLV EQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVINVTVWDHPELTTPAGQYRSSSDTGNWV QSDGTMFYPYIGKVHVAGKTLAEIRSDITGRLAQYIADPQVDVNIAAFRSQKAYISGQVN KSGQQAITNVPLTVLDAINAAGGLTDGADWRNVVLTHNGKEQRISLQALMQNGDLTQNRL LYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDLTASNASGIFV IRPIKGENAKGKIANIYQLDMSDATSLVMATSFRLQPYDVVYVTTAPVARWNRLINQLLP TISGVRYMTDTASDVHNW >gi|333596725|gb|GL892087.1| GENE 751 827691 - 829274 1914 527 aa, chain + ## HITS:1 COG:yegH_2 KEGG:ns NR:ns ## COG: yegH_2 COG1253 # Protein_GI_number: 16130003 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 232 527 1 296 296 510 85.0 1e-144 MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILADKLPPSQRDRARVTGLLLAMVMRLL LLASISWLVTLTKPLFSIQSLSFSARDLIMLFGGLFLLFKATVELNERLEGKDSENPTQR RGAKFWPVVAQIVVLDAVFSLDSVITAVGMVDHLAVMMAAVIIAITLMVLASKALTRFVN SHPTIVILCLSFLLMIGFSLVADGFGFHIPKGYLYAAIGFSVLIEFLNQLAIFNRRRFLS ANQTLRQRTADTVMRLLSGKKEDAELDAESAAMLADHSDGQIFNPQERRMIERVLNLNQR SVSSIMTSRHDIEHVDLTAPEEQIRALLHKNQHTRVVVTGGEEEEELLGVVHVIDLLQQQ LHGEPLNLRALVRQPLVFPEALPLLSALEQFRNARTHFAFVVDEFGSVEGLVTLSDVMET IAGNLPNEVDEIDARHDIQKNADGSWTANGHMPLEDLVQFVPLPLDEKREYHTIAGLLME YLQRIPQPGEEVQVGDYMIKTLQVESHRVQKVQLIPLRGEDEMDFEV >gi|333596725|gb|GL892087.1| GENE 752 829365 - 831215 1878 616 aa, chain - ## HITS:1 COG:ZasmA KEGG:ns NR:ns ## COG: ZasmA COG2982 # Protein_GI_number: 15802546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 1 616 1 617 617 858 70.0 0 MRRVLTTLMILLVVLVAGLSALVLLVNPNDFRAYMVRQVEARSGYELKLDGPLRWHVWPQ LSILSGRMSLTAPGAAQPLVTADNMRLDVALIPLLSHQLQVEQVMLKGAVIQLTPQTEAV RQADAPVAPRENTLPDVPSDTGWSFDIGNLKVADSVLVFQHEDDEQITVRNINLRMEQDA NHHATMEFSGRINRNQRDLNLSMNANVNASDYPHQLTADVQQLNWQLTGADLPTKGIVGQ GTMQAVWHEERKQLELNALNLQANDSTLKGQASVTLDEKPRWVLDLQFDRLNLENLLPPQ PVNATDEGGTQVGQSQGTQSRPVISSNLDQPDYNGLRGFTADILLKANSVRWRGIDFTDV SSQMFNHNGLLVISELSGKMGAGNLSLPGTLDVRKNVASAAFQPRLENVEIGTILKAFNY PIALTGQLSLAGDFSGTKIDADAFRRSWQGQAHVELKDSRMEGLNFQQLVQQAVERSSSV KANENYDSATRLDSFTSELALDNGQLSLDEMQGTSSLLALTGTGALDLVKETADTRFNVR VKAGWEGEGQLVEFLKETPIPLRVYGKWQELNYSLQVDQILRKHLQDEAKRRLNDWADRN KESQSGKDVKKLLDKL >gi|333596725|gb|GL892087.1| GENE 753 831239 - 831820 750 193 aa, chain - ## HITS:1 COG:STM2121 KEGG:ns NR:ns ## COG: STM2121 COG0717 # Protein_GI_number: 16765451 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Salmonella typhimurium LT2 # 1 193 1 193 193 360 93.0 1e-100 MRLCDRDIEAWLDEGRLSITPRPPVERINGVTVDVRLGNKFRTFSGHTAPFIDLSGPKDE VSAALDRVMSDEIVIEEGEAFYLHPGELALAVTFESVTLPADLVGWLDGRSSLARLGLMV HVTAHRIDPGWSGRIVLEFFNAGKLPLALRPGMMIGALSFEPLTGPADRPYNRRQDAKYR DQQGAVASRIDKD >gi|333596725|gb|GL892087.1| GENE 754 831912 - 832553 728 213 aa, chain - ## HITS:1 COG:STM2122 KEGG:ns NR:ns ## COG: STM2122 COG0572 # Protein_GI_number: 16765452 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 402 96.0 1e-112 MTDKSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEE RVKTNYDHPSAMDHSLLFQHLEALKRGEAIELPVYSYVEHTRTQETIRIEPKKVIILEGI LLLTDARLRESMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE >gi|333596725|gb|GL892087.1| GENE 755 832896 - 836225 3314 1109 aa, chain + ## HITS:1 COG:Z3235m_2 KEGG:ns NR:ns ## COG: Z3235m_2 COG2202 # Protein_GI_number: 15804978 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 EDL933 # 301 670 1 370 370 658 82.0 0 MNKQYQRVLVTTPHPLLRLVCLGLVTFIFTLFSLELTRFGTLLAPLWFPTSIMMVAFYRH AGKMWPGIALACSFGNIFASWLLFSWDAISLTYTTINIIEAGIGAVLLRKLLPWYNPLQN LNDWVRLAIGSALIPPLVGGVLVHFLVPSAEPLRNFIFWVLSESIGALALVPLGLLFKPH YLLRHRNPKLLLETLVTLVITLVLSWTAITWLPWPFTCIIVLLMWSAVRLPRMEAFLVFL FTIMMVSLMMARNPASMTPSSMIVTFNAPWLPFLMMLLPANIMTMVMYAFRAERKHITES EERFRNAMEYSAIGMALVGIEGQWLQANKALCNFLGYSQSELQALTFQQLTWPEDLNTDL EQMEQLVNGEINTYSLEKRYYTRSGEVVWALLAVSVVRHADGTPLYFIAQIEDINDLKHT EWVNKRLMERITLANEAGGIGIWEWDLEPDVISWDKRMFELYEIPPHIKPTWSLWHDAIV PEDRTHAEQVLRESLQARMPFKLEFRIRVKDGIRHIRSLANRVLNKQGEVERLLGINMDM TEVKQLNEALFQEKERLHITLDSIGEAVLCTDIDMNITFMNPVAEKMSGWSQSEALGQPV LKVLHITFGENGPLMENIHSGDMSRTDIEQDVVLNCRNGGSYDIHYSITPLSTLDGQNIG SVLVIQDVTESRKMLRQLSYSASHDALTHLANRVSFENHLKRLLQTVQETHQRHALVFID LDRFKAVNDTAGHAAGDALLRELSSLMLTMLRSSDVLARLGGDEFGLLLPDCNVESARYI AGRLIDAINNYHFSWEGRLHRIGASAGITLIDDTNYQAAEVMSQADIACYASKNSGRGVV TVYEPQQERIHSTRSMMSLDEQWHMIKDNHLLMIARSVASPRIPESSSFWLISLRLWTSQ GEVLEEHAFRAGLAEAELLHALDRRIFSEFFRTYARQVAAKGMGVALPLSEAGLASVTLV DELLDLITKGPLPARLLHLAIAVDVLSNKDENVQQGLQKLRHAGCRVVLTRVGRDMNVFS QLSAHTADYLLLDADVVTNVHGNLMDEMMVTIIQGHAQRLGIKTIAGPCHQSIMMDTLSG IGVDFIYGDTIGEAQPLDLLLNTSYFAIN >gi|333596725|gb|GL892087.1| GENE 756 836190 - 837062 901 290 aa, chain - ## HITS:1 COG:STM2124 KEGG:ns NR:ns ## COG: STM2124 COG0122 # Protein_GI_number: 16765454 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Salmonella typhimurium LT2 # 1 289 1 289 289 399 70.0 1e-111 MYTLNWQPPYDWSWMFGFLAARAVAGVETVTEDYYERSFGYAGHRGVFRVTPDSATPTLA VSLSPGLIPVADICLDRIARLFDLDCDPLHIARTLGDLGAARPGLRLPGAMDAYEQGVRA ILGQLVSVAMAAKLASRVVALCGEPIEDAPGYLCFPPPEVLAAADPLALKALGMPLRRAE SLIHLAQSVVDGEFPLFPPANIEAGMKALQQRPGIGRWTANYLALRGWQAKDVFLPDDYL IKQRFAGMTPAQIRRYAERWQPWRSYALLHIWYTDGWSPSVDGEIAGIQQ >gi|333596725|gb|GL892087.1| GENE 757 837241 - 838545 1507 434 aa, chain + ## HITS:1 COG:yegD KEGG:ns NR:ns ## COG: yegD COG0443 # Protein_GI_number: 16130009 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli K12 # 1 433 38 470 471 746 84.0 0 MQNGQPQLLKMENGSTLLPSMLCAPTREAVSEWLFRHHQVPATAAETQALLRRAVSFNRE EDIEVTPSSVQFGLSSLGQYIEDPEEVYFVKSPKSFLGASGLKPQQVAMFEDLVCAMMLH IRNQAQSQVPAAITQAVIGRPINFQGLGGDEANQQAQGILERAAHRAGFRDVVFQYEPVA AGLDFEATLTEEKRVLVVDIGGGTTDCSLMLMGPQWHHRRDRENSLLGHSGCRVGGNDLD IALAFKSLMPLLGMGGQTEKGIALPILPWWNAIAINDVPAQSDFYSTANGRFLNDLVRDA QDAEKVALLYKVWRQRLSYRVVRTAEESKIALSDRPEHAVSLPFISDDLATAITQEGLEA ALVQPLQRILEQVQLALENGKEKPDVIYLTGGSARSPLLKKALAEQLPGIPIAGGDDFGS VTAGLARWAQVVFS >gi|333596725|gb|GL892087.1| GENE 758 838724 - 839926 1463 400 aa, chain + ## HITS:1 COG:ECs2882 KEGG:ns NR:ns ## COG: ECs2882 COG0845 # Protein_GI_number: 15832136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 395 50 444 464 589 83.0 1e-168 MKGSNKFRWAIAVGLIVVALAAACYWHSQSANSTAPAGANSASQRPTGGGRHGMRGGALA PVQAATAVTKAVPRYLSGLGTITAANTVTVRSRVDGQLMAIHFQEGQQVKAGDLLAEIDP SQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDTQQSLVSESQGTIK ADEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPIDLVFTL PESDIATVVQAQKAGKALVVEAWDRTNKQKLSEGLLLSLDNQIDTTTGTIKLKARFNNQD DALFPNQFVNARMLVATEENAVVIPTAALQMGSEGNFVWVLNSENKVSKHLVKTGIQDSQ TVVISAGLSAGDRVVTDGIDRLTEGAQVEVVEAQNTGAKA >gi|333596725|gb|GL892087.1| GENE 759 839926 - 843048 4391 1040 aa, chain + ## HITS:1 COG:ECs2883 KEGG:ns NR:ns ## COG: ECs2883 COG0841 # Protein_GI_number: 15832137 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1040 1 1040 1040 1670 89.0 0 MQVMPPSSTGGPSRLFILRPVATTLLMVAILLAGIIGYRFLPVSALPEVDYPTIQVVTLY PGASPDVVTSAITAPLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLSLDVAEQEVQAA INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSSAMPMTQVEDMVETRVAQKISQVTG VGLVTLAGGQRPAVRVKLNAQAIAALGLTSETIRTAISSANVNSAKGSLDGPTRAVTLSA NDQMQSADEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGA NIIDTADSIRTMLPQLVESLPKSVSVKVLSDRTTNIRASVTDTQYELMLAIALVVMIIYL FLRNVPATIIPAVAVPLSLVGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAI LISAVVSLTLTPMMCARMLSHESLRKQNRFSRASERMFERIIAAYGRVLAKVLNHPWATL GVALGTLALSVMLWIFIPKGFFPIQDNGIIQGTLQAPQTVSFANMAQRQQQVSEIIMKDP AVESLTAYVGVDGTNPSLNSARLQINLKPLDDRDDRVNTVIERLQSAVARVPGIELYLQP IQDLTIDTQVSRTQYQFTLQATTLEALSTWVPQLVDKLKALPQVSDVSSDWQDKGLAAYV NVNRDTASRLGITMSDVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDSV RLTSKDGGIVPLSAIASVEERHTPLSINHLDQFPSTTISFNVPDGYSLGEAVEAILGAEK ELSFPSDIQTQFQGSTLAFQAALGSTVWLIVAAVVAMYIVLGVLYESFIHPITILSTLPT AGVGALLALMLAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMAPREAIFQA CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLLVSQVLTLFTTPVIYL LFDRLALWTKSRFPKREEEA >gi|333596725|gb|GL892087.1| GENE 760 843049 - 846126 3681 1025 aa, chain + ## HITS:1 COG:ECs2884 KEGG:ns NR:ns ## COG: ECs2884 COG0841 # Protein_GI_number: 15832138 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1025 1 1025 1025 1756 92.0 0 MKFFALFIYRPVATILLSVAITLCGVLGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP SGMPSRPTYRKANPSDAPIMILTLTSETYSQGELYDFASTQLAQTIAQIDGVGDVDVGGS SLPAVRVGLNPQALFNQGVSLDDVRSAISNANVRKPQGAIEDNSHRWQIQTNDELKTAAE YQPLIIHYNNGAAVRLSDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVNSI RARLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATL IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKP LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVISLT LTPMMCGWMLKRSQPHSQPRRKGFGRVLMAMQSGYGKSLKWVLNHTRLVGLVLIGTIVLN VWMYITIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIREDPAVDNVTGFTG GSRVNSGMMFITLKPRDERHETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQANAS YQYTLLSDDLAALREWEPKIRKALAALPQLADVNSDSQNNGAEMALTYDRETMSRLGINV EAANSLLNNAFGQREVSTIYQPMNQYKVVMEVDPRYTQDISALDKMFVINNDGKAIPLSY FASWQPSNAPLSVNHQGLSAASTVSFNLPTGSSLSEASDAINRAMTQLGVPSSVRGSFAG TAQVFQDTMNSQVILILAAIATVYIVLGVLYESYVHPLTILSTLPSAGVGALLALELFGA PFSLIALIGIMLLIGIVKKNAIMMVDFALDAQRNGNLTPDEAIFQACLLRFRPIMMTTLA ALFGALPLVMSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRNKR TTVTE >gi|333596725|gb|GL892087.1| GENE 761 846127 - 847542 1773 471 aa, chain + ## HITS:1 COG:STM2129 KEGG:ns NR:ns ## COG: STM2129 COG0477 # Protein_GI_number: 16765459 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 469 1 469 470 660 82.0 0 MTDLPGNVRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVIVAYVLTVAV MLPASGWLADKVGVRNIFFTAIVLFTTGSLFCAQANTLDQLVMARVLQGVGGAMMVPVGR LTVMKIVPRAQYMAAMTFVTLPGQVGPLLGPALGGILVEYASWHWIFLINLPVGIIGAIA TLTLMPNYKMQTRRFDAVGFILLAAGMATLTLALDGQKGLGISSLSLALLVALGITAILW YLWHARGNENALFSLNLFRNPTYRLGLIGSFAGRIGSGMLPFMTPVFLQIGMGFSPFHAG LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVAATLGLALVCLLFMAVALLGWYYILPLVL FCQGIINSMRFSSMNTLTLKDLPDELASSGNSLLSMIMQLSMSVGVTVAGLLLGMYGQHH LTADTPVAHQVFLYTYLSMAVIIALPAFIFARVPNDTTKNVVIRRGKRSAL >gi|333596725|gb|GL892087.1| GENE 762 847539 - 848942 1554 467 aa, chain + ## HITS:1 COG:ECs2886 KEGG:ns NR:ns ## COG: ECs2886 COG0642 # Protein_GI_number: 15832140 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 466 1 466 467 795 86.0 0 MKFWRPGITGKLFVAIFATCIVLLITMHWAVRVSFERGFIDYIKHGNEQRLQGLSDALGE QYSLHGNWRFLRNNDRFIFQILRSLEHDNDDDRPGPGMPPHGWRTQFWVIDQEMRVLVGP RSPVPPDGTKRAITSNGATVGWVIASPVERLTRNTDINFDRQQRQTSWLIVALSTLLAAL ATFPLARGLLAPVKRLVEGTHKLAAGDFSTRVDTRSQDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRQFTPESVASLQAEVGTLTKLVDDLHQLSM SDEGALAYQKAPIDVINILEVVTGAFRERFASRDLKINLSLPDSAVVFGDRDRLMQLFNN LLENSLRYTDGGGALHISGRQENGRFALTFADSAPGVKDAQLEKLFERFYRTEGSRNRAS GGSGLGLAICVNIVEAHGGTIRAAHSPFGGVSITVELPLERDLSREA >gi|333596725|gb|GL892087.1| GENE 763 848939 - 849661 958 240 aa, chain + ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 1 239 240 444 94.0 1e-125 MTELPIDDNTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILL DLMLPGTDGLSLCREIRRFSDVPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVAR VKTILRRCKPQRELQVLDAESPLVVDESRFQASWRSKLLDLTPAEFRLLKTLSHEPGKVF SREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLEALDADQSFIRAVYGVGYRWEADACRIA >gi|333596725|gb|GL892087.1| GENE 764 849836 - 851197 1904 453 aa, chain + ## HITS:1 COG:ECs2889 KEGG:ns NR:ns ## COG: ECs2889 COG0826 # Protein_GI_number: 15832143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 862 91.0 0 MFKPELLSPAGTLQNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGK KFYVVVNIAPHNAKLKTFIRDLKPVVDMGPDALIMSDPGLIMLVRENFPEMDIHLSVQAN AVNWATVKFWKQMGLTRVILSRELSLEEIEEIRTQVPDMEIEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYNVQEGKEDDIGNIVHKHEPIPVTNVEPTLGIGAPTDSVF MIEEAKRPGEYMTAFEDEHGTYIMNSKDLRAVAHVERLTQMGVHSLKIEGRTKSYYYCAR TAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEHGYSISERQ QFVGDFTGERKGPLAAVAVKNKFTKGDSLELMTPQGNMNFRLEHLENKKGEAIEVAPGDG HVVWLPVPEEVELEFALLMRNFEGENTRNPHSK >gi|333596725|gb|GL892087.1| GENE 765 851446 - 852345 785 299 aa, chain + ## HITS:1 COG:STM2140 KEGG:ns NR:ns ## COG: STM2140 COG1597 # Protein_GI_number: 16765469 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 299 461 76.0 1e-130 MATYPDSLLILNGKSAGNDLLRQAITELREDGARIHVRVTFEKGDAARYIDEGIRLGAET IISGGGDGTINEIAGALIDLNTAHRPVMGILPLGTANDFATSAGIPEDLGKALQLAILGK ATAVDIAQVNERTCFINMATGGFGTRITSETPEKLKAALGGVSYLIHGLMRMDTLKPDSC EILGENFHWQGDALVIGIGNGRQAGGGQQLCPEALINDGQLQLRIFTGDGLLPALFTTLT QPEESPNIIDGKSAWFEVIAPHGMTFNLDGEPLSGERFRIEVLPGALECRLPPDCVLLR >gi|333596725|gb|GL892087.1| GENE 766 852835 - 853887 1417 350 aa, chain - ## HITS:1 COG:STM2141 KEGG:ns NR:ns ## COG: STM2141 COG1830 # Protein_GI_number: 16765470 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 350 1 350 350 679 97.0 0 MTDIAQLLGKDADSLLQHRCMTIPADQLYLPGHDYVDRVMVDNNRPPAVLRNMQTLYNTG RLGGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS RRYAHRIPFLVKLNHNETLSYPTEYDQTLYASVEQAFNMGAVAVGATIYFGSEQSRRQIE EISAAFERAHELGMVTVLWAYLRNASFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAVNFGYTDDRVYSKLTSDNPIDLVRYQLANCYMGRAGLINSGGAAGGETDLT DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKVTIA >gi|333596725|gb|GL892087.1| GENE 767 854136 - 855413 1876 425 aa, chain + ## HITS:1 COG:yegT KEGG:ns NR:ns ## COG: yegT COG0477 # Protein_GI_number: 16130036 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 425 1 425 425 704 90.0 0 MKTKVQLSFMMFVEWFIWGAWFVPLWLWLSKSGFTAGEIGWSYACTAIAAILSPILVGSL TDRFFAAQKVLAVLMFAGAILMYFAAQQTQFSTFFPLLLAYSLTYMPTIALTNSIAFANV DDVEADFPRIRVMGTIGWIASGLACGFLPQMMGYSDISDTNIPLLMTAASSLLLGVFALF LPNTPPKSTGKLDFKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLITAAIRYGFFVYGGAEQYFTY ALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRNAAQGLITLCCQGFGSLLGYRLGGVM MEKMFAYKEPVNGLTFNWAGMWTFGAIMIVVIAVLFMLFFRESDKEITAIEVVDGDTALT RGEVK >gi|333596725|gb|GL892087.1| GENE 768 855410 - 856414 1189 334 aa, chain + ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 1 334 1 334 334 535 80.0 1e-152 MKQDRILGALYGQALGDAMGMPSELWPRKRVKAHFGWIDRFLPGPAENNAACYFKQAEFT DDTSMALCLADAIIECDGEINPDVIGKHILDWALDFDAFNKNVLGPTSKIALNAIRDGKP VSELENNGVTNGAAMRASPLGCLLPATRLAHFVEQVALASSPTHKSDLAIAGAVVIAWAV SRAIDGERWQNIADALPGIARAAQEANTTTFSASLSARIELALKTVREANGTESASEQVY QLIGAGTSTLESVPAAIAMVELAGTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVQA IDPALKNELDAVNRLDFGLYCEKLLHFREQREGV >gi|333596725|gb|GL892087.1| GENE 769 856411 - 857364 1014 317 aa, chain + ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 8 317 10 321 321 441 71.0 1e-124 MSAFARRLETLHATRPVTVLGAAVIDVIADAYALPWRGCDIELKQQGVNIGGCALNIAIA LKRLGIAAQNALPVGHGVWADIIRNAMAKQDLHSAVEAETGDNGWCLALVEPDGERTFMS FSGVENQWQQRWLDGLSIPAGSLISLSGYQLASPSGELLTAWLENLQDVTLFIDFGPRIA DIPDPLMARIMACKPIVSLNRQEAELAAEWLGVNVEQLGTQWQQRFGAALIVRHDKDGAI WYDGDASGHVPAFPATVVDTIGAGDSHAGGTLAGLAAGWSLPEAVQLGNAVAAWVVSHRG GDCAPTREALLLAHKDV >gi|333596725|gb|GL892087.1| GENE 770 857338 - 858084 546 248 aa, chain - ## HITS:1 COG:STM2145 KEGG:ns NR:ns ## COG: STM2145 COG2188 # Protein_GI_number: 16765474 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 248 1 248 248 426 84.0 1e-119 MEQAHTRLIAQLKERIAAPDNTPLYLKFAETVKNAVRSGVLAHGNILPGERDLSQLAGVS RITVRKAMQALEEAGVVTRARGYGTQINNIFEYSLKEARGFSQQVVLRGKTPNTLWVNKR VVKCPEEIARHLSLAPDSDVFLLKRIRYVDDDAVSIEESWVPVGLIPNPDDIGVSLYDYF RSQNIFPQRTRSRVSARMPDSEFQTHIKMDDKIPVLVIKQVALDQQHRPIEYSISYCRSD LYVFVCEE >gi|333596725|gb|GL892087.1| GENE 771 858127 - 858927 931 266 aa, chain - ## HITS:1 COG:ECs2906 KEGG:ns NR:ns ## COG: ECs2906 COG0351 # Protein_GI_number: 15832160 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 463 88.0 1e-130 MTRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFV AAQLDSVFSDVRIDTTKIGMLAEADIVEAVAERLKHYRIKNVVLDTVMLAKSGDPLLSAS AIDTLRKKLLPQVALITPNLPEAAALLDAPHAQNEREMKEQGNALLAMGCSAVLMKGGHL DDAESPDWLFTRDGAQRFTAPRVQTKNTHGTGCTLSAALAALRPRHASWAETVQEAKIWL SGALAKADSLEVGHGIGPVHHFHAWW >gi|333596725|gb|GL892087.1| GENE 772 858924 - 859694 533 256 aa, chain - ## HITS:1 COG:ZthiM KEGG:ns NR:ns ## COG: ZthiM COG2145 # Protein_GI_number: 15802579 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 EDL933 # 1 256 1 260 262 321 69.0 1e-87 MQPDQLDSHVLHQFRTRSPLTHCMTNDVVQTFTANVLLALGASPAMVIEAEEAEQFAALA DALLINVGTLTAPRAQSMRRAIESAVGAGTPWVLDPVAVGALAFRTRFCQQLLSLKPAAI RGNASEILALAGMSAGGRGVDSTDTAASALSAAQALARKTHAVVVVTGEVDHITDGQRTR RVAGGDPLMTRVVGTGCALSAVVAACCSLPGDRLDNATAACGFMKRAGSVALSHSRGPGS FAPAFLDALYALEEQV >gi|333596725|gb|GL892087.1| GENE 773 860381 - 860536 59 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295098176|emb|CBK87266.1| ## NR: gi|295098176|emb|CBK87266.1| YadA-like C-terminal region [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 51 119 169 169 76 98.0 5e-13 MFSAGGATYNGESALAVGASVNVNSHVIAKVSFSDDTANNMGASVGIGMGF >gi|333596725|gb|GL892087.1| GENE 774 860736 - 861164 177 142 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2712 NR:ns ## KEGG: Ent638_2712 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 54 142 79 167 167 115 66.0 4e-25 MLVISTAVLAGCVSPAHAINAHYRAQLERSGCTQISAGDGSCDISKTKAENAAQHEPAES VHDPLREASFSSDTVNATLSNGFFSATVNGKKASVKRLNANFYEIQGNGFVISLSLDENG ITDASWNKMKGREHGVLHVSQK >gi|333596725|gb|GL892087.1| GENE 775 861479 - 862852 1452 457 aa, chain + ## HITS:1 COG:HI0949 KEGG:ns NR:ns ## COG: HI0949 COG0160 # Protein_GI_number: 16272887 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Haemophilus influenzae # 15 452 13 448 454 592 65.0 1e-169 MTDKVRIDTVDAHKSNETYLARQAEFESNVRSYPRKLPLAITKAEGVWITDADNKEYLDC LAGAGTLALGHNHPDVLKSIQNVITSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCL QFTGPSGADAVEAALKLAKKVTGRSGIISFSGGYHGMTHGALSVTGNLSPKEAVDGMMPE VQFMPYPHEYRCPLGIGGEAGVKALTYYFENLINDVESGVRKPAAVILEAVQGEGGVNPA PVEWLQRIRKVTQEHGILLILDEVQAGFARTGKFFAFEHAGIEPDIIVMSKAVGGGLPLA VLGIKKQFDAWAPGHHTGTFRGNQLAMATGLTTLKILKDQNIAGKVAAQGEWLKGQLKEM AKRYPVIGHVRGLGMMIGIEIVKPHEAADHMGCFPGDGELSALIQKKCFEAGLVLERGGR NGIVLRLLPSLLISDEELKIFLDKFEQALLAAGVRPA >gi|333596725|gb|GL892087.1| GENE 776 862871 - 864337 2052 488 aa, chain + ## HITS:1 COG:HI0946.1 KEGG:ns NR:ns ## COG: HI0946.1 COG0076 # Protein_GI_number: 16272884 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Haemophilus influenzae # 13 485 17 497 511 519 54.0 1e-147 MSDSNPILFSSAQSIEAYQQAIEQSTQAVMQWLKQPEMYQGKTVAELRDRIKLDFNPKGL GNEAAIERAVEFFLKDSLSVHHPQCVAHLHCPSLVVSQAAEVLINATNQSMDSWDQSPSA TIIEIKLIEWLRTRVGYQAGDAGVFTSGGTQSNLMGLMLARDAFFARQGHSVQQDGLVGD LRKIRVLCSENAHFSVQKNMALMGLGYQSVVQVKTDEFSRMDLTDLAAKIEQCNANGEQI LAIVATAGTTDAGAIDPLRAIAELAAKQNIWVHVDAAWGGALLMSEQYRHYLDGIELVDS VTLDFHKQFFQTISCGAFLLKEARHYELMRYQAAYLNSEFDEEAGVPNLVSKSLQTTRRF DALKLWMSLEALGQEQYAAIIDHGVTLAQQVAAYVKEQSALELVMQPQLASVLFRFRPQA QMDDAGIALLNQKIGDALLESGRANVGVTEHNGITCLKLTLLNPTVTLEDVKVLLSLVER TAQEVLAK >gi|333596725|gb|GL892087.1| GENE 777 864382 - 866580 1459 732 aa, chain - ## HITS:1 COG:ZyccC_1 KEGG:ns NR:ns ## COG: ZyccC_1 COG3206 # Protein_GI_number: 15800902 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli O157:H7 EDL933 # 8 481 7 480 480 552 59.0 1e-156 MSSYTTDNYGAAAPQQSEIDLVRLLGEMIDHRTIILCVTFLFTLCAGMYAWVTPPVYQAD AMVQIENKQDNSLLKGLSQLSSDVSPDVAPELLLLKSRMILGETVDKLDLSYQATPRVFP VVGRLWQRLQGRGLGKITLGELQIPLLEGKPQELTLTVKEEGKFHLSGENFEAEGAVGKR LDKQGVSLLVGSIAAEPGTQFSLRALTRLETINALKKNLTVAESAKQSGIVALTLTGEDP DKIARVLNAIADNFLEQNIARQEAQDSRSLAFLQEQLPKIRNELDQAEARLNAYRAQRDS VDLSLEAKSVLDQVVNVENQLNELTFREAEISQLFKRSHPTYRALAEKRQTLERERDRLN NRVSAMPSTQQEILRLSRDVESGRTIYLQLLTRQQELNISRSSAIGNVRIIDTAVTHPEP IKPRKALIIILGTLFGLVVSVGGVLVRQAFKRGITLSEQLEMPGTPVLATLPRSQWLWKK THLHRKLPFSRQWKHKTTDVPFLPVDRPADMFVEAVRGLRTSLHFTMMEAENRIVMISGP TQDCGKTLVGTNLAAIAGQSGQRVLFIDADMRQGYVHNIFGLDNRYGLSSVLEGKRDCAE VIQHAEKGDIDVITCGPTPLRPLELLLSEQFLSTMSWVNEQYDIIIIDTPPVLAVTDAAL VARTAGTTLMVARYDKTSVKEMENTFKRLQHVGVKISGTILNDIVKSRALFYSSGCSHYE YDYASKNQREGR >gi|333596725|gb|GL892087.1| GENE 778 866580 - 867029 387 149 aa, chain - ## HITS:1 COG:ECs1138 KEGG:ns NR:ns ## COG: ECs1138 COG0394 # Protein_GI_number: 15830392 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 2 144 10 152 152 181 61.0 3e-46 MFNTILVVCTGNVCRSPIGERLLRQYLPDRHITSAGIFGLEGRPADDYAQEVAWRHGISL DGHVARKLTRGLMQESDLILVMEPEHLRFISAMAPEIRGKSLLFGQWLEPQDIPDPYRKS REAFEYVFGLLGKASQEWARRLGQKGMKH >gi|333596725|gb|GL892087.1| GENE 779 867029 - 868168 963 379 aa, chain - ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 2 378 3 378 379 579 75.0 1e-165 MKNTTAFSLLLLSIFPLSGCVFSPGQNLNVEGKQVITAEDANYDLEKRVEVYPLTPALIE KLRPQVLNSQANPNLDEQVKNWEYRIGTGDILTVTVWDHPELTTPAGQYRSASDTGNWVN ADGTLFYPYIGKLHVAGKTVSQVREEITARLNDVIESPQVDVSVAAFRSQKAYITGEVVK SGQQAITNIPLTVMDAVNAAGGLSADADWRNVVLTHNGKDSRLSLYALMQHGDLTQNKLL HPGDILFVPRNDALKVFVMGEVVKQSTLKMDRSGMTLAEALGNAGGLNQDMADATGIFVI RSVAKKDRAGKIANIYQLNAKDASAMVLGTEFQLEPYDIVYVTTAPLSRWNRVITQLVPT ISGVHDITETVRYIRSWPQ >gi|333596725|gb|GL892087.1| GENE 780 868634 - 868981 383 115 aa, chain + ## HITS:1 COG:yohN KEGG:ns NR:ns ## COG: yohN COG5455 # Protein_GI_number: 16130045 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 2 115 57 172 172 134 63.0 3e-32 MTGEKMAKRKLLLLGVLLSLAGAAHAAPQASTAPSGIKAYEEQEFIADFTKFKIGDTAPA QYQTPEYTIKQYQLRNLPAPDAGTHWTYMGENYVLIGDADGKIYKAYNGDIFYHR >gi|333596725|gb|GL892087.1| GENE 781 868926 - 869411 378 161 aa, chain + ## HITS:1 COG:VCA0382 KEGG:ns NR:ns ## COG: VCA0382 COG0454 # Protein_GI_number: 15601145 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Vibrio cholerae # 34 158 14 137 141 110 40.0 1e-24 MPMAKSTKPITEIFSITADTILIRPWQESDRPFLRTLFLHARREAWPWLDSSVWQLEDFD AATLDEEIWVAEQDGHRLGFASVWTNDNFLHNLFVDPQYQSLGVGHLLLEQVQKTFTSTG ALKCLVKNERAIAFYQRHGWHIEATGDSPEGEYYLMHYRLG >gi|333596725|gb|GL892087.1| GENE 782 869501 - 870610 1254 369 aa, chain - ## HITS:1 COG:ECs2919 KEGG:ns NR:ns ## COG: ECs2919 COG0489 # Protein_GI_number: 15832173 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 369 11 379 379 674 92.0 0 MSSQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWLDDTLHIELQMPFVWT SAFDALKEQTSSELLRITGAKAIDWKLSHSIATLKRVKNQPGVNGVKNIIAVSSGKGGVG KSSTAVNLALALAAEGAKVGILDADIYGPSIPNMLGAENQRPTSPDGTHMAPIMAHGLAT NSIGYLVTDDNAMVWRGPMASKALLQMLQETMWPDLDYLVLDMPPGTGDIQLTLAQNIPV TGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSMHICSNCGHHEPIFGTGGAEK LAAQYHTQLLGQLPLHITLREDLDSGKPTVVSRPESEFAEIYRQLAGRVAAQLYWQGEVI PSEIAFRAV >gi|333596725|gb|GL892087.1| GENE 783 870776 - 872809 2670 677 aa, chain + ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 567 1 567 567 1157 94.0 0 MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIM LKAQQLGISPEQMIAEMSQEHQTDFAGFDISYDNYHSTHSDENRELSELIYTRLKENGFI KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG ATPVMRDSEHFFFDLPSFSEMLKAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTVSFDEYWKKDSDAELYHFIGKDIVY FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFIAKRFDGVLSAELADPELYK TFTDAAAAVGEAWESREFGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLQAICTM GLNMFRVLMTWLKPVLPQLSARAEAFLNTELTWDAIHQPLLSHKVNTFKALYNRIEMKQV EALVEASKEEVKAAAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVDGSDKLLR LTLDLGGEKRNVFSGIRSAYPDPQVLIGRQTVMVANLAPRKMRFGISEGMVMAAGPGGKD IFLLSPDEGAKPGQQVK >gi|333596725|gb|GL892087.1| GENE 784 872919 - 873389 538 156 aa, chain - ## HITS:1 COG:yehS KEGG:ns NR:ns ## COG: yehS COG4807 # Protein_GI_number: 16130062 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 156 1 156 156 244 76.0 3e-65 MLSNDILRSLRYTLKANNNDMVRILALSDMESTSAGFDTWMTKEDEEGFVRCPDIILSGF LNGLIYDKRGKDESAPELALERRVNNNTVLKKLRIAFSLKTDDIVAIMTEQKYRVSVPEV TAMMRAPDHKNYRECGDQFLRNFLRGLTHRVHNTKG >gi|333596725|gb|GL892087.1| GENE 785 873436 - 874155 982 239 aa, chain - ## HITS:1 COG:STM2158 KEGG:ns NR:ns ## COG: STM2158 COG3279 # Protein_GI_number: 16765488 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 421 90.0 1e-118 MLRVLIVDDEPLARENLRVLLQEQSDIEVVGECANAIEGIGAVHKLRPDVLFLDIQMPRI SGLEMVGMLDPEHRPYIVFLTAFDEYAVKAFEEHAFDYLLKPIEEKRLEKTLTRLRQERS VQDVTLLPEHQQPLKFIPCTGHSRIYLLQMDDVAFVSSRLSGVYVTSAEGNEGFTELTLR TLESRTPLIRCHRQYLVNMAHLKEIRLEDNGQAELVLRAGQTVPVSRRYLKSLKEAIGL >gi|333596725|gb|GL892087.1| GENE 786 874149 - 875834 1685 561 aa, chain - ## HITS:1 COG:STM2159 KEGG:ns NR:ns ## COG: STM2159 COG3275 # Protein_GI_number: 16765489 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Salmonella typhimurium LT2 # 1 560 1 561 561 973 91.0 0 MYEFNLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKFLCYVVFSIFCIMGTWF GLHIEDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLL GGLVHSYMIKRGRPDKVFSPLTAGAITFVAEMAQMAIILLIARPFDDALHLVSSIAAPMM VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEENSMKVAQVLY KELDIGAVAITDREKLLAFTGTGDDHHLPGKPISSAYTLRAIETGEVVYADGNEVPYRCS LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY ERQKALLTQSEIKLLHAQVNPHFLFNALNTLKAVIRRDSDQAAQLVQFLSTFFRKNLKRP SEIVTLADEIEHVNAYLQIEKARFQSRLQVSLSVPDELAYQHLPAFTLQPIVENAIKHGT SQLLGTGEIMISASRFNHHLVLDIEDNAGLYDVSASGGLGMSLVDKRLRAHFGDDCGITV ACEPDRYTRITLRLPLEENAC >gi|333596725|gb|GL892087.1| GENE 787 876053 - 876793 466 246 aa, chain + ## HITS:1 COG:yehV KEGG:ns NR:ns ## COG: yehV COG0789 # Protein_GI_number: 16130065 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 242 1 242 243 379 78.0 1e-105 MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKSWIDNG VQVGKVKSLLSQDDPDTQHLWREQQETLLRLLQSGNVQRLRGWIKEQGRDYPAQTLITHL FIPLRRRLQCQQTTLQALLSMLDGVLINYISVCLASARNKNSKDALVIGWNVHDTTRLWL EAWIATQQGWRVDVLAHSLAQLRPELFEGQTLLVWCGEVPSASQQQRLMEWREHGYPVYS LGPNAS >gi|333596725|gb|GL892087.1| GENE 788 876863 - 876976 72 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKATKLAVITLFALMAVSGIGGVMLAGYSFIVRGGVG >gi|333596725|gb|GL892087.1| GENE 789 876951 - 877625 668 224 aa, chain - ## HITS:1 COG:STM2162 KEGG:ns NR:ns ## COG: STM2162 COG1174 # Protein_GI_number: 16765492 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Salmonella typhimurium LT2 # 2 222 23 243 243 282 78.0 3e-76 MPHSAALFNALIPGLPRPVYQQESFVNLTLAHFWLVAVSSVIAIVLGVGAGIAVTRPAGR EFRPLVETIAATGQTFPPVAVLAIAVPAIGFGQEPAIIALILYGVLPILQGTLAGIAAVP ASVLSVAEGMGMSAWQRLVKVELPLAAPVIIAGVRTSVIINIGTATIASTVGANTLGTPI IIGLSGFNTAYIIQGAVLVALAAIVVDRLFERLAGYLSQHRREQ >gi|333596725|gb|GL892087.1| GENE 790 877672 - 878622 1071 316 aa, chain - ## HITS:1 COG:STM2163 KEGG:ns NR:ns ## COG: STM2163 COG1125 # Protein_GI_number: 16765493 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Salmonella typhimurium LT2 # 1 307 1 306 315 493 81.0 1e-139 MIEFHDVSKTFAGRPAASHLNLHFAEGAFSVLIGTSGSGKSTTLKMINRLVEHDSGTIRF AGEEIRSLPVLELRRRMGYAIQSIGLFPHWTVAQNIATVLQLEKWSRAKINERVDELMAL LGLDASLRDRYPHQLSGGQQQRVGVARALAANPQVLLMDEPFGALDPVTRGALQAEMSRI HRILGRTIVLVTHDIDEALRLADRLVLMDHGEVVQQGTPLELLTAPANDFVREFFGRSEL GVRLLSLRTVRDYMRPQEAQIGGEPLHDAMSLRDALSAFVARQCEVLPVADGQGTPCGTI HFRDLLAGEVTSEVGT >gi|333596725|gb|GL892087.1| GENE 791 878615 - 879772 1153 385 aa, chain - ## HITS:1 COG:STM2164 KEGG:ns NR:ns ## COG: STM2164 COG1174 # Protein_GI_number: 16765494 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Salmonella typhimurium LT2 # 7 385 11 389 389 406 69.0 1e-113 MPIKCHNRVLLLLACVAIAAVALPFVNVAPNRLVSGEPRALWQIWSFTPLLLGAALASAV VLAFWPGRAAQWLTLLLSEALFIVLFWSAGQAATQMASVESPLARTSIGSGLWLWLALCL LVCSDAIRRLTPMPVWRWLLNAQFWVIPLLILFSGDLNHLSLLKEYVNRQEVFDNALAQH LTILFGTLIPALLLGVPLGMWCYRHPSRQGAVFTVLNVIQTIPSVALFGLLIAPLAGLVK SFPALAAAGIAGTGLTPALIALVLYALLPLVRGVVAGLSQVAPDVLESAHAMGMSARQCF WKIQLPLALPLLVRSLRVVTVQTVGMAVIAALIGAGGFGALVFQGLLSSALDLVLLGVVP TIALAVVLDALFALWLALLRRRAND >gi|333596725|gb|GL892087.1| GENE 792 879785 - 880702 1455 305 aa, chain - ## HITS:1 COG:STM2165 KEGG:ns NR:ns ## COG: STM2165 COG1732 # Protein_GI_number: 16765495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Salmonella typhimurium LT2 # 1 305 1 305 305 484 85.0 1e-137 MTMIKGIAGSTVLLAALSLPLQAAEPVKVGSKIDTEGALLGNIILQVLESHGVKTVNKVQ LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDPAWKNAKAGYEKVKKLDAEKNKLVW LTPAPANNTWTIAVRKDIAEKGKLTSLDDLSRYLKEKGEFKLAASAEFIERADALPAFEK AYDFKLDQAQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLTDPKGVQ PIYAPTPVVREAVLQAYPDIDAWLKPVFEKLDAKTLQQLNASIAVEGLDAKKVAADFLKQ QGLVK >gi|333596725|gb|GL892087.1| GENE 793 880839 - 883136 3059 765 aa, chain - ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 764 1 764 765 1442 94.0 0 MKWLCSVGVAVSLALQPALAEDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVG PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMQLSRLKIPLFFAYDVVHGQRTVF PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTFL TATMGKTMVEAMQRKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA SDPEDAVRVALKSGINMSMSDEYYSKYLPGLVKSGKVTMAELDDAARHVLNVKYDMGLFN DPYSHLGPKDSDPTDTNAESRLHRKEAREVARESLVLLKNRLDTLPLKKSGTIAVVGPLA DSKRDVMGSWSAAGVADQSVTVLTGIKSAVGDNAKVVYAKGANVTDDKDIVTFLNQYEEA VKVDPRTPKEMIDEAVNAAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGPLYPFGYGLSYTTFTVSDVKMSA PTMKRDGSVTASVDVTNSGKREGATVIQMYVQDVTASMSRPVKQLRGFEKVNLKPGETRT VSFPIDVNALKFWNQQMKYDAEPGKFNVFIGVDSARVNKAEFELQ >gi|333596725|gb|GL892087.1| GENE 794 883326 - 885104 2014 592 aa, chain + ## HITS:1 COG:STM2167 KEGG:ns NR:ns ## COG: STM2167 COG0277 # Protein_GI_number: 16765497 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 574 1 574 576 1064 87.0 0 MSSVRTDDNTAFINELSRLVGHSHLLTDPAKTARYRKGFRSGQGDALAVVFPGTLLELWR VLSACVAADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTLRLDKLHLLDKGEQVLAFP GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARID ENGKLTLVNHLGIDLGVTPEQILSKLDDDRVKDEDVQHDGRHAHDHDYITRVRDIEADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFPAEKKQQVFYIGTNQPEVLTEIRRHILAEF THLPVAGEYMHRDIYDIAERYGKDTFLMIDKLGTDKMPFFFTMKGRTDAMLEKVSLFKPH FTDRFMQKLGNVFPAHLPERMKTWRDKYEHHLLLKMAGDGIAEAQSWLTGFFKTADGDFF ACTPEEGSKAFLHRFAAAGAAIRYQAVHSEEVEDILALDIALRRNDTEWFEHLPPEIDSK LVHKLYYGHFMCYVFHQDYIVKKGVDAHALKEQMLALLHERGAQYPAEHNVGHLYKAPET LKQFYRKNDPTNSMNPGIGKTTRQKYWKESAETEQRNTQAADDLVQPNLRDC >gi|333596725|gb|GL892087.1| GENE 795 885186 - 885740 507 184 aa, chain + ## HITS:1 COG:BMEI1858 KEGG:ns NR:ns ## COG: BMEI1858 COG1247 # Protein_GI_number: 17988141 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Brucella melitensis # 14 183 4 173 179 160 47.0 2e-39 MSAVEIFPETEIEVRDALPDDAHAISAIYAWHVLHGRASFEEVPPTVDEMRERMKRVTDS GLPWLVALYRGIVVGYCYATFYRPRQAYRYTLEESIYVDASTTGRGFGSVLLQALIARCE QGPWRQMIAVVGDGQNNPGSLRLHKKHGFEMVGQLRSVGYKKGDWRDTVLMQRPLNDGDW TLPE >gi|333596725|gb|GL892087.1| GENE 796 885837 - 886760 1122 307 aa, chain - ## HITS:1 COG:pbpG KEGG:ns NR:ns ## COG: pbpG COG1686 # Protein_GI_number: 16130072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli K12 # 1 293 4 295 313 478 87.0 1e-135 MLKFRVSLLSLALLLGVSATAPAIAKTPAVATAAAQPQIASGSAMIVDLNTNKVIYASHP DLVRPIASITKVMTAMVVLDARLPLDEKLKVDISHTPEMKGIYSRVRLNSEISRKNMLLL ALMSSENRAAASLAHHYPGGYDAFIRAMNAKAKALGMKNTHFVEPTGLSIHNVSTARDLT KLLIASKQYPLIGQLSTTREEMATFSNPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAG HCLVMRTVFNGKPVALVVMDAFGKYTHFADASRLRTWIETGKVQPVPASALAYKKQKAEQ MATAQND >gi|333596725|gb|GL892087.1| GENE 797 886928 - 887542 728 204 aa, chain - ## HITS:1 COG:no KEGG:ECL_03447 NR:ns ## KEGG: ECL_03447 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 10 204 1 195 195 332 95.0 4e-90 MTGRQQGGVMNHVWGLFSHPDREMQVIRNENETVAHHYIHHVLLMAAVPVVCAFIGTTQI GWNFGDGTVVQLSWFTGLYLAILFYGLMLAGVAVMGRVIHWMARNYPQRPSLAHCMVFAG YVATPLFLSGIVALYPLVWLCALIGTVALFYTGYLLYVGVPTFLNINKEEGLSFSSSTLA IGVLVLEALLALTVILWGYGYRLF >gi|333596725|gb|GL892087.1| GENE 798 887673 - 888245 626 190 aa, chain + ## HITS:1 COG:STM2170 KEGG:ns NR:ns ## COG: STM2170 COG0586 # Protein_GI_number: 16765500 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 188 10 197 198 272 75.0 3e-73 MDINGLIEQYGYAALVIGSVAEGETITLLGGVAAHQGLLKFPLVVAAVALGGMIGDQLLY FLGLRFGPTLLQRFAKHQKKIRRAQRLIQRHPYLFVIGTRFMYGFRIIGPILIGASRLPP KIFLPLNIIGAIAWALIFTTLGYVGGEVIGPWLHNLDQHLKHWAWLILVVAAVIGVRLWL RHREKRQGDE >gi|333596725|gb|GL892087.1| GENE 799 888250 - 889014 202 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 241 4 238 242 82 27 7e-14 MTRVAIVTASDSGIGKTTALMLAERGFDIGVTWHSDEKGALATCREIEARGQRAEAIHLD LSNLPEGAKAIDTLIARFGRLDVLVNNAGAMSKAPFLELSFDDWRHIFTVDVDGAFLCSQ IAARQMVKQGEGGRIVNITSVHEHTPLPDASAYTAAKHALGGLTKSMALELVKHKILVNA VAPGAIATPMNDMDDSEVKEGSMPSIPLARPGHTKEIASLVAWLCDSDASYTTGQSFIVD GGFMLANPQFKPEG >gi|333596725|gb|GL892087.1| GENE 800 889065 - 890483 1387 472 aa, chain - ## HITS:1 COG:STM2172 KEGG:ns NR:ns ## COG: STM2172 COG1538 # Protein_GI_number: 16765502 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 5 470 7 477 478 638 73.0 0 MKPSLTLSLSVPLVFMLAACAPEHATVSPVKTQVTAAAVNTQLPHADWPKSEWWKDYHDP QLNALVAKAIADAPDMQIARQRITLAEAQAKAAIAADGPQLDFSADVERQKMSAEGLMGP FALTDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNRAHIEARIGKVNAQKAELEQTRQLLA SSVARLYWDWQTEAAVGDVLAQIKREQENIIGADRELYQHGITSSVEGVETDINASKTDE QLADVHGKMKAIEARLNALTNTPSLTLTRHALPDVEASLPSTLGYELLARRPDLQEAHWY IEASMSDVEAARAAFYPDVNLMAFLQQDALHLSDLFRSSAQQMGVTAGLTLPIFDSGRLN ANLDIAQAQNNLSVANYNKAVVDAVNQVARTASEVETLTTKNQHQQQIEKDAARVVALAQ ARFSAGIIAGSRVSEAKIPALKERISGLLLKGQYVDATLQLTSALGGGYHHS >gi|333596725|gb|GL892087.1| GENE 801 890817 - 891752 1163 311 aa, chain - ## HITS:1 COG:YPO1175 KEGG:ns NR:ns ## COG: YPO1175 COG0042 # Protein_GI_number: 16121470 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Yersinia pestis # 1 308 3 310 314 563 87.0 1e-160 MRVLLAPMEGVLDSLVRELLTEVNDYDLCVTEFLRVVDMLLPEKSFYRLCPELHRQSRTP SGTLVRVQLLGQYPEWLAENAARAVALGSYGVDLNCGCPSKLVNGSGGGATLLKDPELIY RGAKAMREAVPSHLPVTVKVRLGWDSGDKQFEIADAVQQAGATELVVHGRTKEDGYKAER INWQAIGEIRKRLTIPVIANGEIWDYESAQACLKETGCNAVMIGRGALNVPNLSRVVKYN EPRMPWPDVVKLLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDDALGLFQEIRTLQTS ADIARVIQSKH >gi|333596725|gb|GL892087.1| GENE 802 891921 - 892316 481 131 aa, chain + ## HITS:1 COG:ECs3033 KEGG:ns NR:ns ## COG: ECs3033 COG1380 # Protein_GI_number: 15832287 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli O157:H7 # 1 128 1 128 132 202 90.0 2e-52 MSKSLNTIWQYLRAFVLIYACLYAGIFIASLLPITIPGSIIGMLILFVLLALQVLPAKWV NPGCFVLIRYMALLFVPIGVGVMQYYDVLKAQFGPIVVSCAISTLVVFLVVSWSSHIVHG ERKVVGEKTKK >gi|333596725|gb|GL892087.1| GENE 803 892313 - 893008 804 231 aa, chain + ## HITS:1 COG:yohK KEGG:ns NR:ns ## COG: yohK COG1346 # Protein_GI_number: 16130080 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 355 90.0 3e-98 MMANIWWSLPLTLLVFFAARKLAVRFKMPLLNPLLVAMVVIIPFLLLTGIPYERYFAGSK ILNDLLQPAVVALAFPLYEQLHQIRARWKSIITICFVGSLVAMITGTSVALLMGASPQIA ASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNIMKIRTKAARGLA MGTASHALGTARCAELDYQEGAFSSLALVICGIITSLVAPFIFPVILAVMG >gi|333596725|gb|GL892087.1| GENE 804 893137 - 894021 950 294 aa, chain + ## HITS:1 COG:STM2183 KEGG:ns NR:ns ## COG: STM2183 COG0295 # Protein_GI_number: 16765513 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 480 86.0 1e-135 MHPRFQAAFSQLAENLQSALAPVLADVHFPALLTADQVTTLKQATGLDEDALAFALLPLA AACARADLSHFNVGAIARGVSGTWYFGGNMEFLGATMQQTVHAEQSAISHAWLRGEKALR AITVNYTPCGHCRQFMNELNSGLELRINLPGRAPHTLGDYLPDAFGPKDLEIKTLLMDEE DHGYALSGDALSEAAIAAANKSHTPYSKSPSGVALECRDGRIFTGSYAENAAFNPTLPPL QGALNLLSLNGYDYPDIQRAILAEIADAPLIQWDATAATLKALGCSALYRVLLA >gi|333596725|gb|GL892087.1| GENE 805 894149 - 894859 949 236 aa, chain + ## HITS:1 COG:ECs3036 KEGG:ns NR:ns ## COG: ECs3036 COG2949 # Protein_GI_number: 15832290 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 236 1 236 239 427 92.0 1e-119 MLKRVFYSLSVLVGILLLIVLGLDRWMSWKTAPYIFDDLQDLPYRQVGVVLGTAKYYRTG VINQYYRYCIQGALNAYNSGKVNYLLLSGDNALQSYNEPVTMRKDLIAAGVDPADIVLDY AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRV REFGARFGALADLYLFKREPRFLGPLVPIPTMHEVPEDAQGYPAVTPEQLLEMQKK >gi|333596725|gb|GL892087.1| GENE 806 894987 - 895997 1381 336 aa, chain - ## HITS:1 COG:STM2188 KEGG:ns NR:ns ## COG: STM2188 COG4211 # Protein_GI_number: 16765518 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 478 96.0 1e-134 MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVIAATLLQSMENANKVFPEMATMPIFVVILIVCAIGAVIG LINGIIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFTQGFVALGS FRLSYITFYALIAVAFVWILWNKTRFGKNIFAIGGNPEAAKVSGVNVALNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVLGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK >gi|333596725|gb|GL892087.1| GENE 807 896013 - 897533 198 506 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 279 482 17 215 245 80 27 2e-13 MVSTTTQSSGEYLLEMTGVNKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLF GIYQKDSGSILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGVF VDQDKMYRDTKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYDAKIVIMDEPTSSL TEKEVNHLFTIIRKLKDRGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLEGLDMDK IIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKAEGTITLHGKKINNHNANEAINNGFALVTEERRSTGIYAYLDINF NSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRW LLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMS NGLVAGIVDTKTTTQNEILRLASLHL >gi|333596725|gb|GL892087.1| GENE 808 897613 - 898611 1331 332 aa, chain - ## HITS:1 COG:STM2190 KEGG:ns NR:ns ## COG: STM2190 COG1879 # Protein_GI_number: 16765520 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 332 1 332 332 567 93.0 1e-161 MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKSAPDVQLL MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQIQFVLLKGEPGHPDAEA RTTYVIKELNDKGLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG AVEALKAHNKSAIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLADGKG AADGTSWKIENKIVRVPYVGVDQSNLAEFIGK >gi|333596725|gb|GL892087.1| GENE 809 898907 - 899929 1272 340 aa, chain - ## HITS:1 COG:STM2191 KEGG:ns NR:ns ## COG: STM2191 COG1609 # Protein_GI_number: 16765521 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 340 1 340 340 581 87.0 1e-166 MITIRDVARQAGVSVATVSRVLNNSALVSPETRETVMKAVTQLGYRPNANAQALATQVSD TIGVVVMDVSDAFFGALVKAVDVVAQQHQKYVLIGNSYHEAEKERYAIEVLIRQRCNALI VHSKALSDEELAGFMEQIPGMVLINRIVPGYAHRCVGLDNISGAMMATRMLISNGHQRIG YLASSHGIEDDMMRREGWQNALKEQGIAPLESWVGTGSPDMQGGEAAMVELLGRNLQLTA VFAYNDSMAAGALTALKDNGIAVPQHLSLIGFDDIPIARYTDPQLTTVRYPIASMAKLAT ELALQGAAGLLDPDATHCFMPTLVRRHSVSVRQTVAPITN >gi|333596725|gb|GL892087.1| GENE 810 900085 - 901242 1300 385 aa, chain - ## HITS:1 COG:Z3408 KEGG:ns NR:ns ## COG: Z3408 COG2311 # Protein_GI_number: 15802708 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 385 44 428 428 557 79.0 1e-158 MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGDITRSDAWTWAILDLFAQVK FLTLFALLFGAGLQLLLKRGTRWIQARLTLLVILGFIHGLLFWDGDILLAYGLVGLICWR LIRDAPGVKSLFNTGVMLYVMGLCVLLLLGMIAGGATSRSWIPDAANLQYEQFWKLKGGM EAIGNRADMLGDNLLALGAQYGWQLAGMMLMGAALMRTGWLKGEFSLRHYRRTGAGLVLL GVIINLPAVIVQWHLQWDYRWCAFLLQVPRELSAPFQTIGYAALIYGFWPQLSRLWIVSA VACVGRMALSNYILQTLICTTLFYRFGLFIKFDRLTLLAFVIPVWIVNVVFSVVWLRYFR QGPLEWAWRQLTARASGVSLRNTSR >gi|333596725|gb|GL892087.1| GENE 811 901261 - 901929 978 222 aa, chain - ## HITS:1 COG:STM2193 KEGG:ns NR:ns ## COG: STM2193 COG0302 # Protein_GI_number: 16765523 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Salmonella typhimurium LT2 # 1 221 1 221 222 395 95.0 1e-110 MSSLSKEAALVHEALVARGLETPLRPPVQELDNATRKSLIAGHMTEIMQLLNLDLSDDSL METPHRIAKMYVDEIFSGLDYANFPKITVIENKMKVDEMVTVRDITLTSTCEHHFVTIDG KATVAYIPKDTVIGLSKINRIVQFFAQRPQVQERLTQQILTALQTLLGTNNVAVSIDAVH YCVKARGVRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHN >gi|333596725|gb|GL892087.1| GENE 812 902032 - 903180 1470 382 aa, chain - ## HITS:1 COG:YPO1504 KEGG:ns NR:ns ## COG: YPO1504 COG0477 # Protein_GI_number: 16121777 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 381 1 381 383 424 69.0 1e-118 MALRIALSGFVVLVVAMGIGRFAFTPQVPLMIAAGQLTLTSAGLVAAMNYLGYLVGAWDA MRAHRFVETRLWLGITGAVALTLLSAAAENAVVHGLLRFVIGCMSGWSMVLIAAWTNERL GQLGKPGLSAAVFAGPGAGIALSGLLAVYIQAKSLSAGAAWQIYGVLALVLIVLVARYLP RAGQLHRPGTAPEPLLLTADLKRLVWSYSLAGFGYILPATFLSQMAAVRFPGSLFAQFVW PIFGAASVVGIALSIALRHTSSANRRLAIVLWLQGVGVLAAWLLPGIGGLLTGGLLVGGG FLCAVQLSLLCGRELAPDHTRYMAGLLTTGYAIGQLVGPVTSALSTWLTHRLEPALGLAG IALFVAGALVWNRQAERQQQLQ >gi|333596725|gb|GL892087.1| GENE 813 903318 - 904145 891 275 aa, chain + ## HITS:1 COG:ECs3046 KEGG:ns NR:ns ## COG: ECs3046 COG0627 # Protein_GI_number: 15832300 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 275 1 278 278 466 80.0 1e-131 MELLEEHRCFEGRQQRWRHDSTTLNCAMTFSIFLPPADNPPVLYWLSGLTCNDENFTTKA GAQRIAAELGIALVMPDTSPRGDDVADDAGYDLGKGAGFYLNATEQPWASHYHMYDYIRD ELPALVHAQFAVSERCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPTQVPWGQKA FTHYLGEDAEKWQEWDSCALMLASQPENAIPMLVDQGDADQFLAGQLQPALLAEAARQKD WPLTLRIQPGYDHSYYFMASFIEDHLRFHAEHLFR >gi|333596725|gb|GL892087.1| GENE 814 904413 - 906398 2306 661 aa, chain + ## HITS:1 COG:YPO1313 KEGG:ns NR:ns ## COG: YPO1313 COG4771 # Protein_GI_number: 16121595 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Yersinia pestis # 10 661 14 665 665 803 61.0 0 MTIPRIKLLAVAVGAATCSSFVHAADQDTVVVTATGFEQKIQNAPASISVISKQQIEDKA YRDVTDALRDVPGVVVTGGGSSSDISIRGMASQYTLFLVNGKRVSTRSTRPNSDNSGIEQ GWLPPLESIERIEVIRGPMSSLYGSDAMGGVINVITKKVSNTKAWTGSLHGDATFQENHD SGDIFQTNAYASGPLIDGLLGAKVTGLLSRRAEDKIVNGYNEQKMRNGGITLNFTPDEKN DFDLDFARELQDRNSTPGMSKATETCRGTTCTPTTKSDSRYEHTTYSLTHSGYYDDFNTT SYIQQEETNNPGREMRSYNTTFNNQNQVFLGDHTLTLGGQYRYEKLRDNGNQLEAADGLN KLTRWSWALFAEDEWSMTESFTLTGGLRMDKDQNYGTNWTPRGYGVWHLAEQWTLKGGVS AGYRAPDLRQSSASWGQVTGGGRLDGIIVGNPDLKPEKSLSEELALLWDNNDNLNAGVTL FNTDFKDKITEVRRCNSSADPACTIGGHSYDFVSDRVNVDKANMRGVESSFGWKITRDLN WTANYTYTESEQKSGQFSGKPLNKMPKHMFNTTLDWQATHDVGFWSRVNLRGKTSEYLSR TSMSQGTPSYTQVDVGMRYNANKNLLVTAGVYNVLDKQIDYDTYDTVLDGRRYTVGMTYS F >gi|333596725|gb|GL892087.1| GENE 815 906453 - 907922 1829 489 aa, chain - ## HITS:1 COG:STM2200 KEGG:ns NR:ns ## COG: STM2200 COG0833 # Protein_GI_number: 16765530 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 489 1 489 489 861 93.0 0 MVSETKTTEAPALRRALKARHLTMIAIGGSIGTGLFVASGATISAAGPGGALFSYILIGL MVYFLMTSLGELAAYMPVSGSFSTYGQKYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLV MTWWFPDTPGWIWSALFLAVIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVAMIVG IFKGAEPAGWSNWTIGDAPFAGGFSAMIGVAMIVGFSFQGTELIGIAAGESENPEKNIPR AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVM NAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFSKLSRGGVPRNALYATTVIAGLCF LTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVKQGHDLNNLPYRSGFFPLG PIFAFVLCLIITLGQNYEAFLADTIDWGAVTATYIGIPLFLIIWFGYKLTKGTRFVRYSE MDFPERFKQ >gi|333596725|gb|GL892087.1| GENE 816 908107 - 908973 1040 288 aa, chain - ## HITS:1 COG:STM2201 KEGG:ns NR:ns ## COG: STM2201 COG0583 # Protein_GI_number: 16765531 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 483 85.0 1e-136 MHITLRQLEVFAEVLKSGSTTQASQMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN EHGRLLYPRALALLEQAIEIEQLFREDNGAIRVYASSTIGNYVLPEVIARYRRDFPTLPL EMSVGNSQDVINAVIDFRVDIGLIEGPCHNVDIIAEPWLEDELVVFASPASSLLQGEVTL ARLAQAQWILREQGSGTREIVDYLLLSHLPQFQLGMELGNSEAIKHAVRHGLGISCLSRR VIAEQLETGSLVEIPVPLPKLVRTLWCIHHRQKHLSSALQRFLRYCEM >gi|333596725|gb|GL892087.1| GENE 817 909071 - 910117 1173 348 aa, chain + ## HITS:1 COG:STM2202 KEGG:ns NR:ns ## COG: STM2202 COG2855 # Protein_GI_number: 16765532 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 348 1 349 349 521 88.0 1e-147 MSEITLQHHRTVWHFVPGLALSAVVTGVALWGGSIPAVAGAGFSALTLAILLGMVVGNTV YPHIWKSCDGGVIFARQHLLRLGIILYGFRLTFSQIADVGVSGIAIDVLTLSSTFLLACF IGQKIFGLDKQTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTLAIFLY PAMYPLVAHWFSPETYGIYIGSTMHEVAQVVAAGHAINPEAENAAVIAKMLRVMMLAPFL IFLAARVKQLAPAGGNEKSKITIPWFAILFIVVAIFNSFHLLPKAVVEMLVTLDTVLLAM AMAALGVTTHVSALKKAGAKPLLMALVLFIWLIVGGGAINLAVHSLLA >gi|333596725|gb|GL892087.1| GENE 818 910182 - 911039 1145 285 aa, chain + ## HITS:1 COG:ECs3051 KEGG:ns NR:ns ## COG: ECs3051 COG0648 # Protein_GI_number: 15832305 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 509 86.0 1e-144 MKYVGAHVSAAGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLTAEVIDDFKAACEKYH YGPGQILPHDSYLINLGHPVQEALEKSREAFLDEVQRCEQLGLTLLNFHPGSHLMQIDED ACLARIAESINMTLDKTKGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRTTEATKNTFDEFERVVGFKYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG HDAFRFIMQDARFDGIPMVLETINPDIWAEEIAWLKAQQTTEQAA >gi|333596725|gb|GL892087.1| GENE 819 911115 - 912800 2403 561 aa, chain - ## HITS:1 COG:STM2204_3 KEGG:ns NR:ns ## COG: STM2204_3 COG1299 # Protein_GI_number: 16765534 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 224 561 1 338 338 523 95.0 1e-148 MKTLLIIDSGLGQARAYMAKTLLGAAAQKAHLDIIDNPGDAEMAIVLGDKIPADSALNGK KVWLGDINRAVAHPELFLSEAKGHATVYSAPVEAAPVAATGPKRIVAVTACPTGVAHTFM AAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAEADLVIVAADIEVDLAKFAGKPMY RTSTGLALKKTAQEFDKALAEAKPYQPTGAAKTSGEGKKESAGAYRHLLTGVSYMLPMVV AGGLCIALSFAFGIEAFKEQGTLAAALMQIGGGSAFALMVPVLAGFIAFSIADRPGLTPG LIGGMLAVSTGSGFIGGIIAGFLAGYVAKLISSKLKLPQSMEALKPILIIPLISSLVVGL AMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLL STQTYAPMAAIMAAGMVPPLALGLATIIARRKFDKAQQEGGKAALVLGLCFITEGAIPFA ARDPMRVLPCCIVGGAVTGAISMAVGAKLMAPHGGLFVLLIPGAITPVLGYLLAIVVGTL VAGLSYAVLKRPEADVVAKAA >gi|333596725|gb|GL892087.1| GENE 820 912817 - 913755 1154 312 aa, chain - ## HITS:1 COG:ECs3060 KEGG:ns NR:ns ## COG: ECs3060 COG1105 # Protein_GI_number: 15832314 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 593 96.0 1e-169 MSRRVATITLNPAYDLVGFCPEIERGEVNLVRTTGLHAAGKGINVAKVLKDLGIDVTVGG FLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDLNFSGFEVTPADWER FVADSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSRDALVAGLKAS PWLVKPNRRELEIWAGRKLPELKDVIDAAHALREQGIAHVVISLGAEGALWVNASGEWIA KPPSMEVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRTQLA AMMARVDLKPFN >gi|333596725|gb|GL892087.1| GENE 821 913755 - 914885 1522 376 aa, chain - ## HITS:1 COG:STM2206_1 KEGG:ns NR:ns ## COG: STM2206_1 COG4668 # Protein_GI_number: 16765536 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Salmonella typhimurium LT2 # 1 288 1 288 288 421 87.0 1e-118 MFQLSVQDIHPGEQAGNKEEAIHQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAI PHGTTDTRDQVLKTGVQVYQFPQGVLWGEGQVAYVAIGIAASGDEHLGLLRQLTHVLSDD AVAEQLKSATTAEELRALLMGEKQSEALKLDNETLTLDVVASDLVTLQALNAARLKEVGA ADAGFVSRTINDKPLNLGQGIWLNDSAEGNLRSAIAVSRAAVAFETDGERAAMLVTVAMT DDQPVSVLKRLGDLLLNNKAEKLLNADAATVLALLTSDDALTDDLLSAEYVVRNEHGLHA RPGTMLVNTIKQFESEITVTNLDGSGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQA LKAIGDAIAAGLGEGA >gi|333596725|gb|GL892087.1| GENE 822 915193 - 916425 1293 410 aa, chain + ## HITS:1 COG:STM2207 KEGG:ns NR:ns ## COG: STM2207 COG0477 # Protein_GI_number: 16765537 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 18 410 1 393 393 627 87.0 1e-180 MTGGVNSASLCHSQVLNMHNNPAAASPKPFDLTSTAFLIVAFLTGIAGALQTPTLSLFLT NEVHARPAMVGFFFTGSAIIGIFVSQFLAGRSDRKGDRKSLIVFCCLLGVFACLLFAWNR NYFILLFVGVFLSSFGSTANPQMFALAREHADRTGREAVMFSSILRAQVSLAWVIGPPLA YALAMGFGFTVMYLSAAVAFVVCGAMVWFFLPSMRKEPKVATGTLEAPRRNRRDALLLFI ICTLMWGTNSLYIINMPLFIIDELHLPEKLAGIMMGTAAGLEIPTMLIAGYYAKRFGKRF LMRVAAVAGLLFYVGMLTVHTPALLLALQLLNAIYIGILAGIGMLYFQDLMPGQAGAATT LYTNTTRVGWIIAGSLAGVVAEIWNYHTVFWIALVMCVLTLSCLTRIKDV >gi|333596725|gb|GL892087.1| GENE 823 916422 - 916676 121 84 aa, chain - ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 103 70.0 6e-23 MDCRSDCGACCTAPSISSPIPGMPEGKPANTRCVQLSDSNLCMIFGSPLRPKVCSGLQPT AEMCGSTRQQAITYLLEQEALTAP >gi|333596725|gb|GL892087.1| GENE 824 916841 - 917413 799 190 aa, chain + ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 369 94.0 1e-102 MPRANEIKKGMVLNYNGKLLIVKDIDIQAPSARGAATLYKMRFSDVRTGLKVEERFKGDD IVDTVTLTRRYVDFSYIDGNEYVFMDKEDYTPYIFTKDQIEEELLFIPEGGMPDMQVLTW DGVLLALELPQTVDLEIVETAPGIKGASASARNKPATLTTGLVVQVPEYLSAGEKIRIHI EEKRYMGRAD >gi|333596725|gb|GL892087.1| GENE 825 917537 - 918727 1573 396 aa, chain - ## HITS:1 COG:YPO1283 KEGG:ns NR:ns ## COG: YPO1283 COG1312 # Protein_GI_number: 16121566 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Yersinia pestis # 1 395 1 395 397 700 83.0 0 MEQTWRWYGPNDPVSLDDVRQAGATGVVTALHHIPNGQVWPVEEIQKRQAQLAEKGLTWS VVESIPVHEDIKTHSGECDTWIANYQQSIRNLAACGIDTVCYNFMPILDWTRTDLEYEMA DGSKALRFDQIAFAAFELHILKRPGAEADYTAEEQQQALAWFNAASEADIEKLVRNIIAG LPGAEEGYTLDQFRARLAEYGDIDKNQLRENMAHFLRAIVPVAEEAGVRLAVHPDDPPRP ILGLPRIVSTIEDMQWLKETVDSIYNGYTMCTGSYGVRADNDLVRMIETFGDRIHFTHLR ATCREENPKTFHEAAHLGGDVNMVAVVDAILAEEVRRKQAGDVRPIPFRPDHGHQMLDDL RKKTNPGYSAIGRLKGMAEVRGIELALKMTKYPELL >gi|333596725|gb|GL892087.1| GENE 826 918933 - 920399 1384 488 aa, chain + ## HITS:1 COG:ECs3064 KEGG:ns NR:ns ## COG: ECs3064 COG0246 # Protein_GI_number: 15832318 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 488 1 488 488 817 79.0 0 MKTIASTALPAHVQLPRYDRAPLRSRIVHFGFGAFHRAHQALLTNRVLNAKGGDWGICEI SLFSGDVLMGQLRAQDHLFTVLEKGAEGNQPIIIGAVKECLNAKLDSLAAIIEKFCEPQV AIVSLTITEKGYCIDPATGKLDMQNSRILHDLEHPSEPHSAPGILVEALHRRRERGLPAF TVLSCDNIPDNGHVVKNAVLGMAGKRSAELAGWIETHVSFPGTMVDRIVPAATDASLAEI TRELGVEDPCAISCEPFIQWVVEDNFVAGRPEWEVAGVQMVEDVLPWEQMKLRMLNGSHS FLAYLGYLAGYAHINECMQDDSFREAARRLMLNEQAPTLRITNVDLTAYADSLLDRFANP ALQHRTWQIAMDGSQKLPQRMLDGIRMLLERNTAWPLLALGVAGWMRYVSGTDEQGNAID VRDPLSEKFQAIVATSSDAERVSALLTLNEIFGDDLPQNPAFVEAISEAYQRLVRLGARQ AVIETLKI >gi|333596725|gb|GL892087.1| GENE 827 920523 - 921509 981 328 aa, chain + ## HITS:1 COG:ECs3065 KEGG:ns NR:ns ## COG: ECs3065 COG0523 # Protein_GI_number: 15832319 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli O157:H7 # 1 325 1 325 328 556 82.0 1e-158 MTKTNLITGFLGSGKTTSILHLLANKDPAEKWAVLVNEFGEVGIDGALLADSGAMVKEIP GGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWLELRATL CLLDPRQLLDEKAINNDNFRDQLASADIIVANKSDRATAESQAAFESWWQQAGGGRQYVQ TTQGNIDDALLDLPRLNQTQLPASAEHSHSHGAKQGLAALSLPEHQRWRRNLNSGQGHQA CGWIFDADTVFDTIGILEWARLAPVERVKGIMRTPDGLVRINRQGEDFFIETQNVAPPDS RIELISAVNTDWNALQSGLLKLRLSLGG >gi|333596725|gb|GL892087.1| GENE 828 921543 - 922256 789 237 aa, chain + ## HITS:1 COG:STM2213 KEGG:ns NR:ns ## COG: STM2213 COG0671 # Protein_GI_number: 16765542 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 237 3 239 239 356 78.0 2e-98 MTTRLPAILLLNAAGLALFFSWYIPANHGFWFPLDSGLFHFFNQALAKSEAFLWLVAITN NRAFDGCSLLAMGCLMLSFWLKEDKTGRRRILIIGLVMLLTAVIINQLAQHLMPVKRASP SLSFPNINRVSELLHIPTKDASKDSFPGDHGMMLLIFAGFMLRYFGKKAFAIALIIVVVF AFPRVMIGAHWLTDIAVGSLTAVLIGLPWVLMTPLSDRLTGIFDRYLPGKFKQVANK >gi|333596725|gb|GL892087.1| GENE 829 922777 - 923241 365 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 31 150 58 174 175 145 59 8e-33 MHPETRVVGMEDSSSLQASQDEFENMVRNLDVKSRIMDQYADWKGVRYRLGGSTKKGIDC SAFVQRTFREQFGLDLPRSTYEQQEMGKSISRTKLRTGDLVLFRAGSTGRHVGIYIGNDQ FVHASTSSGVTISSMNEPYWKKRYNEARRVLSRS >gi|333596725|gb|GL892087.1| GENE 830 923369 - 924922 1591 517 aa, chain + ## HITS:1 COG:STM2215_2 KEGG:ns NR:ns ## COG: STM2215_2 COG2200 # Protein_GI_number: 16765544 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 261 509 1 249 258 399 76.0 1e-111 MFTRYFSSNRKILFLSFLTGLFTALLLGALQFYWSYHKRDVRFDTLITDLRVYMESYFDE LKMSIDTLQPLTLNSCEEVSAALTSRAAFSINVRAFLLVRDKNAYCSSATGPMNVPMEAL IPELHISKPIDMALLPGTPMLPDKPAIAIWYRNPLVKDGGVFTSVNINLTPYLLYTSRQD EFTGISIIIGDFALSTQSGTLVQARDLPGIPVRTATLKNVPLTIHVYADAWTPDEVLYAL FFGLVCGIAAGVLNFYILTIRLNPGKEILTAIKRDQFYVVYQPVVGAQSLKMTGLEVLMR WKHPVMGEIPPDAFINFAEAQKLIVPLTLHLFDLIIRDAPVLQTLLPPGAKFGINIAPGH LHAESFKEDMRAFAAALPPDHFQIVLEITERDMINHREANHLFEWLHDEGFEIAIDDFGT GHSALIYLERFTMDFLKIDRGFVNAIGTETVTSPVLDAVLTLADRLNMLTVAEGVETPEQ AAWLREHGVNYLQGYWIGRPMPLEQFRTWQPDITLGE >gi|333596725|gb|GL892087.1| GENE 831 924998 - 926803 1935 601 aa, chain + ## HITS:1 COG:STM2216 KEGG:ns NR:ns ## COG: STM2216 COG4166 # Protein_GI_number: 16765545 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 601 1 601 601 991 79.0 0 MIMRVVLTLLALVSLSSQAQTIKESTAFAVIGEPKYAVNFNHYDYVNPAAPKGGNVTLAA TGTFDNFNRFALRGVAAARTESLYDTLFVTSDDEPGSYYPLVAENVRYADDFSWAEIAIN PRARFHDGTSVSARDVAFTFHKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELPEPNKENM LSLFSLPVMPESFWKNHKLSDPLSTPPLAGGPYRITDWRMGQYVIYSRVKDYWAAALPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRIESSAKNWATRYIGKNFAKGYIVKDEHK NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYGAYSRANSYFQNTEYAA RDYPHADELVLLAPLKAELPPEVFTRVFEPPKSDGNGFDRENLLKASKLLDDAGWVLKNQ QRVNAQTGKPLSFELLIASGANDQWVLPFKKNLARLGVTLNIRQVDMAQLTNRKRSRDYD MMQTLWAAQPWPSSDLQIAWASGYIDSSYNAPGVKSPVIDALIAKIVAAQGDKEKLLPLG RALDRVLTWNYYMLPMWYMGEDRLARWDKFSLPAVRPVYTLGFDTWWYDVNKAAKLPAER R >gi|333596725|gb|GL892087.1| GENE 832 926813 - 927907 1285 364 aa, chain + ## HITS:1 COG:ECs3070 KEGG:ns NR:ns ## COG: ECs3070 COG4174 # Protein_GI_number: 15832324 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 648 92.0 0 MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGHAGGMPGGGGEGMGA SHARTGVGNISESHYRGGRGLDPEVIAEITHRYGFDKPIHERYFNMLWDYVRFDFGDSLF RSASVLTLIKQSLPVSITLGLWGTLIIYLVSIPLGIRKAVYNGSRFDIWSSTFIIIGYAI PAFLFAVLLIVFFAGGSYFDLFPLRGLVSADFSTLPWYQKITDYFWHITLPVLATVIGGF AALTMLTKNAFLDEIRKQYVVTARAKGVGEKQIMWKHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIISDISYTLVDPRID FEGR >gi|333596725|gb|GL892087.1| GENE 833 927907 - 928932 1195 341 aa, chain + ## HITS:1 COG:yejE KEGG:ns NR:ns ## COG: yejE COG4239 # Protein_GI_number: 16130117 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli K12 # 1 341 1 341 341 580 87.0 1e-165 MSRLSPVNQARWARFRHNRRGYWSLWIFAVLFALSMCSELIANDKPLLVHFKDRWYVPVL TTYSESDFGGPFATPAEYQDPWLREQIAQHGWAIWAPIRFGANSINFATSTPFPSPPSAQ NWLGTDANGGDVLARILYGTRISLLFGLMLTLFSSVMGVVAGAVQGYYGGKIDLWGQRVI EVWSGMPTLFLIILLSSVVQPGFWWLLGITVLFGWMALVGVVRAEFLRTRNYDYIRAAQA LGVSDRAIIFRHMLPNAVVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQG KNNLQAPWLGIAAFLSVAVLLSLLIFIGEAVRDAFDPNKAV >gi|333596725|gb|GL892087.1| GENE 834 928934 - 930523 177 529 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 292 505 10 215 305 72 27 5e-11 MTRPLLSIENLSIAFSTQGESRTVVSDLSLQIARGETLALVGESGSGKSVSALSVLRLLP SPPVSYPQGDILFHGQSLLNADEPTLRGIRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS LHRGMRKEAARGEILDCLERTGIRNAAKRLNDYPHQLSGGERQRVMIAMALLTRPELLIA DEPTTALDVTVQAQILQLLRELRDELNMSLLFITHNLSIVRKLADTVAVMQNGRCVEQNR ASSLLSAPQHPYTQRLLDSEPSGDPVPLNADSAPLLRVEGLSVSFPIRKGILRRVVDHNH VLKDMRFSLRPGESLGLVGESGSGKSTTGLALLRLIASQGSIVFDGMPLQNLNRRMMLPV RPRMQVVFQDPNSSLNPRLSVLQIIEEGLRVHQPTMTAQQRETEVKRVMAEVGLDPETRH RYPAEFSGGQRQRIAIARALILKPELIVLDEPTSSLDRTVQAQILALLKGLQEKHRLAYI FISHDLQVVRALCHQVVVLRQGEVVEQGECQRVFTAPTQDYTRQLLSAD >gi|333596725|gb|GL892087.1| GENE 835 930527 - 930871 258 114 aa, chain - ## HITS:1 COG:no KEGG:ECL_03500 NR:ns ## KEGG: ECL_03500 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 114 1 114 114 214 93.0 7e-55 MNTLQLSIVHRLPQSYRWSTGFAGSKVEPIPQSVAGEDNCLVALKLLSPSDENAWPVMER LSQALTDIEVDSSVLECEGEPCLFVNSQDEFAATCRLKNFGVAIAEPFSGQYPF >gi|333596725|gb|GL892087.1| GENE 836 931148 - 932347 1418 399 aa, chain - ## HITS:1 COG:STM2221 KEGG:ns NR:ns ## COG: STM2221 COG0477 # Protein_GI_number: 16765550 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 395 1 395 396 605 91.0 1e-173 MTTRPHSSFKIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSAQMTLSTYILGFAL GQLFYGPMADSLGRKPVILGGTLIFAAAAVACALAQSIDQLIVMRFFHGLAAAAASVVIN ALMRDVYPKEEFSRMMSFVMLVTTIAPLVAPMVGGAVLVWFSWHAIFWILAIAALLASVM IFVFIDETLPVERRQKFHVRTTLGNFASLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IELNHVSPQHFGYYFALNIVFLFVMTIINSRFVRRVGALNMFRAGLWIQFVMAIWLVLSA LLGVGFWALVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL LSMATFNTAWPMLWAIALCATCSILFYLYASRPRKTAQK >gi|333596725|gb|GL892087.1| GENE 837 932363 - 933070 826 235 aa, chain - ## HITS:1 COG:ECs3075 KEGG:ns NR:ns ## COG: ECs3075 COG1187 # Protein_GI_number: 15832329 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 230 1 230 231 420 90.0 1e-118 MRLDKFIAQQLGVSRAIAGREIRASRVTVDGDIVKDSAFKLQPDHQVEYDGNPLTQQNGP RYFMLNKPEGYVCSTDDPDHPTVLYFLDEPVAHKLHAAGRLDIDTTGLVLMTDDGQWSHR ITSPRHHCEKTYRVTLESPVSDDTAEQFAKGVQLHNEKDLTKPAVLEILTPTDVRLTISE GRYHQVKRMFAAVGNHVVGLHRERIGAIELDPDLAPGEYRPLTEEEIASVGLPSR >gi|333596725|gb|GL892087.1| GENE 838 933222 - 934982 1803 586 aa, chain + ## HITS:1 COG:STM2223_1 KEGG:ns NR:ns ## COG: STM2223_1 COG1061 # Protein_GI_number: 16765552 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Salmonella typhimurium LT2 # 1 358 1 358 358 681 91.0 0 MTFTLRPYQQEAVDATLAWFRKHREPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLERFHSEFSLLIVDECH RISDEDDSQYQQILTHLKEVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQKRITPH IISQIEEFAQTRKGVMIFAATVEHAREITGLLPADDAALITGETPGPERDRLIEAFKAQQ FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP HDLYSPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALKLKDALVLRCSGMA LLPGADEKGEWLKITYYDEDGADVSERFRVQTPAQRTAFEQLFIRPHTRTPGVPLRWITV ADIVRQQALLRHPDFVVARKKGQFWQVREKVFDYEGRFRRANELRG >gi|333596725|gb|GL892087.1| GENE 839 935108 - 935392 435 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152971157|ref|YP_001336266.1| 50S ribosomal protein L25 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 94 1 94 94 172 90 6e-41 MFTIEAEVRNVQGKGASRRLRTANKFPAIVYGGEAAPVAIELDHDKVWNMQTKAEFYSEV LTIVVGGKEEKVKVQAVQRHAFKPKLTHIDFVRA >gi|333596725|gb|GL892087.1| GENE 840 935444 - 936451 1448 335 aa, chain - ## HITS:1 COG:STM2226 KEGG:ns NR:ns ## COG: STM2226 COG3081 # Protein_GI_number: 16765555 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Salmonella typhimurium LT2 # 1 335 1 335 335 613 94.0 1e-175 MSLEINQIALHQLIKRDEQTLEVVLRDSLLEPTPTVVEMMAELHRVYSAKNKAYGLFSEE SELADGLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLTVEYLLVTV LNNLSSMRVNEQLDISSTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD FFMDFLGASEGLNAKAQNKGLLQAVDDFTAEAQLDKSERQTVRQQVYSYCNEQLQAGEEI ELESLSKELAGVSEVSFQEFTAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK >gi|333596725|gb|GL892087.1| GENE 841 936586 - 936813 258 75 aa, chain + ## HITS:1 COG:YPO1261 KEGG:ns NR:ns ## COG: YPO1261 COG3082 # Protein_GI_number: 16121547 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 75 1 75 75 107 82.0 8e-24 MPQHSRYSDEHVEQLLSELVNVLEKHKTPTDLSLMVLGNMVTNLINTSVAPAQRQAIAKS FAQALQSSVSDDQAH >gi|333596725|gb|GL892087.1| GENE 842 936833 - 938593 1964 586 aa, chain + ## HITS:1 COG:STM2228 KEGG:ns NR:ns ## COG: STM2228 COG3083 # Protein_GI_number: 16765557 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Salmonella typhimurium LT2 # 1 586 1 586 586 1013 84.0 0 MVTNRQRYREKVSQMVSWGHWFALFNILLAMVLGCRYLFVADWPTTLTGRVYSWMSLVGH FSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPVVW ELVINPDQNETARDWQLMFISVPIILLIEMLFATWSWQKLRSLTRRRHYAKSVAALFFAS FIGSHLMYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLVEQGNPE AVSVQYPLSDLKYRDMGRGQNVLLITVDGLNYSRYEKQMPALAEFAENNIVFTQHMSSGN STDAGIFGLFYGISPSYMDGVLSARIPAALITGLNQQGYQLGLFASDGFNSSLYRQALLS DFSLPAAQSQSDDQTADQWINWLKRYAQEDNRWFSWVAFNGTTLDDSNQKGFARRYSRAA GDVDAQIGRVLTALRDAGKLENTVVIITAGHGVPLGDETKSMDWSRPNLHVPLVIHWPGT PAQRINMLTDHKDVMTTLMQRLLHVSTPAIEYSQGQDLFSATRRHNWVTAAGGNTLVVTT PTLSLVLNSNGNYQTYNLEGEKLKDQKPQLSLLLQVLTDEKRFIAN >gi|333596725|gb|GL892087.1| GENE 843 938810 - 939070 361 86 aa, chain - ## HITS:1 COG:no KEGG:ECL_03510 NR:ns ## KEGG: ECL_03510 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 86 1 86 86 140 95.0 1e-32 MVREKLKTPEGRKFLLALLVVFMIAAACVGRATIVGVIEQYNIPLSAWTTSMFVLQSAMI FVYSLVFTVLLAIPLGIFFLGGREKH >gi|333596725|gb|GL892087.1| GENE 844 939273 - 939782 470 169 aa, chain + ## HITS:1 COG:ECs3098 KEGG:ns NR:ns ## COG: ECs3098 COG4574 # Protein_GI_number: 15832352 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli O157:H7 # 12 169 7 162 162 251 79.0 3e-67 MTVKNAPKFAIALIAAACASASAFASETQKEQPLEKVAPYPQADKGMKRQVIQLPAQQDE ANFKVELLIGQTLEVDCNQHRLGGQLESKTLEGWGYDYYVFDKVTSPVSTMMACPDGKKE KKFVTAYLGDNSLLRYNSKLPIVIYTPENVEVKYRVWKAEENVVQAVVR >gi|333596725|gb|GL892087.1| GENE 845 939876 - 941525 2073 549 aa, chain - ## HITS:1 COG:yojH KEGG:ns NR:ns ## COG: yojH COG0579 # Protein_GI_number: 16130147 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 1 549 1 548 548 936 85.0 0 MKKMTAVLFSLAVGLNAVSLAAKADAPKEQETDVLLIGGGIMSATLGTYLQELEPNWSMT MVERLDGVAQESSNGWNNAGTGHSALMELNYTPQKKDGSISIEKAVEINEAFQISRQFWS HQVNSGVLHNPHSFINTVPHMSFVWGDQNVNFLRARYAALQQSTLFRGMKYSEDHAQIKE WAPLVMEGRDPNQKVAATRTEIGTDVNYGEITRQLVASLKKKENFNLQLSSEVRGFKRNA DNSWSVTVADLKNNEAEHVIKAKFVFIGAGGAALKLLQESGIPEADDYAGFPVGGQFLVS ENPDVVKRHLAKVYGQASVGAPPMSVPHIDTRMLDGKRVVLFGPFATFSTKFLKNGSLWD LLSATTTSNVKPMMDVGLDNFDLVKYLISQVMLSDEERFEALKEYYPQAKKEDWRLWQAG QRVQIIKRDPKEGGVLRLGTEVVSDKDGTIAALLGASPGASTAAPIMLHLMEKVFKDKVS SPEWQAKLKTIIPSYGTKLNGNVEATEQELEYTSRVLQLQYVKPQAADAAPKAELKPQPE NKPVADIAL >gi|333596725|gb|GL892087.1| GENE 846 941767 - 943008 1426 413 aa, chain + ## HITS:1 COG:Cgl1438 KEGG:ns NR:ns ## COG: Cgl1438 COG0659 # Protein_GI_number: 19552688 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Corynebacterium glutamicum # 33 395 1 363 462 313 52.0 5e-85 MSLPHSSVPHEGHVATVLRSPERLMRETLAGVITALALIPEVISFSVVAGVDPKVSLIAS VVLCFALSLLGGRPAMVTAAAGSVALVIGPMVHQHGVQYILPAVVMAGVIQILFGALGMA RLMRFIPQSVMTGFVNALGILIFFAQVPHFWSRSPLIVGLFVLTLLIVLWVPRYIKSVPS PLIAIVLLTLFTVTSGQILPTVGDEGSMSGGLPGFTQLLVPLNLDTLSIIWPCALSIAFV GLLESLLTAKLVDELTVTPSSKRRESIGLGVGNIMAGFYGGIAGCAMIGQTIVNVEMGKG RSRISTLAAGIVLLVLVTALSEVMAKIPMAVLAGIMAIVAIKTFSWHSVQPGTLKNAPVA ETVVMLVTVVATVSTGNLAIGVLGGIVMMFILPARLKQKALATEEKSSPVQGK >gi|333596725|gb|GL892087.1| GENE 847 942971 - 944407 1621 478 aa, chain - ## HITS:1 COG:YPO2839 KEGG:ns NR:ns ## COG: YPO2839 COG2239 # Protein_GI_number: 16123034 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Yersinia pestis # 16 478 29 491 491 561 64.0 1e-159 MSVLKKNSARQRDQERARLIWLLTTDKAVTSTLLGKLTLAEQYDVGTLADDIAEVGALVA HLPPPDLADTLEALPSEERHALWRLVQDHERGQVLLEASENVWDDLIDEMSDRDILDALQ TLDIDEQIYLVQHLPRNLTGRLLASLPAEERARVRQVMHYEKNSVGAIMEFGVITVRPDV TLGTVQRYLRRLGSMPDNTDKLFVTSRDKTLLGELELKTILLNSTQQRVSEVMETEPMVF SPEDDAEKAARTFERDDLVSAAVVDSVGKLMGRLTIDEIVDVVYEETDNDLRALGGISAE DDVHASVGKAVKTRWAWLAINLCTAFVASRVIDGFEHTISQLVALASLMPIVAGIGGNTG NQTITMIVRALALENIQPGNFSWLIFREMGVALINGLVWGGIMGGITWWLYDDMALGGVM MLAMVLNLLVAAMMGVIIPLTMTRLGRDPAVGSSVMITAITDTGGFFIFLGLATIFLL >gi|333596725|gb|GL892087.1| GENE 848 944555 - 946198 191 547 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 316 541 138 357 398 78 30 1e-12 MQLLLLVWRQYRWPFIAVMALSLASAALGIGLIAFINVRLIEMVDTSLSVLPEFLGLLLL LMAVTLGSQLALTALGHHFVFRLRSEFIKRILDTQVERIEQLGSASLLAGLTSDVRAITI AFVRLPELVQGIILTFGSAAYLAWLSSKMLAVTALWIVITIWGGFLLVSRVYKHMAVLRE TEDKLYNDYQTVLEGRKELTLNRERAEHIFNHLYIPDAHEYRHHIIRADTFHLSAVNWSN IMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLK KFDLAPFKAEFPRPQAFPNWQTLELRNVTFRYQDNAFSVGPINLTIHRGELLFLIGGNGS GKSTLAMLLTGLYQPQSGEILLDGKALSAEKPEDYRKLFSAVFTDVWLFDRLLGPEGQQA DPALVEKWLAHLQMSHKLELQDGKILNIKLSKGQKKRVALLLALAEERDIILLDEWAADQ DPHFRREFYQVLLPLMQAMGKTIFAISHDDHYFIHADRLLEMRDGKLSELTGDERDAASR DAVARTA >gi|333596725|gb|GL892087.1| GENE 849 946284 - 946925 609 213 aa, chain - ## HITS:1 COG:ECs3101 KEGG:ns NR:ns ## COG: ECs3101 COG3145 # Protein_GI_number: 15832355 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Escherichia coli O157:H7 # 1 213 1 213 216 341 76.0 5e-94 MLDLFADAEPWQEPLAPGATILRRFALSRAAALFDGIDAVTARSPFRHMVTPGGYTMSVA MTNCGELGWATNERGYVYATADPLTDRPWPPMPEAFQALCHDAAVAAGYPDFRPDACLIN RYAVGAKLSLHQDKDEPDLRAPIVSVSLGLPAVFQFGGLRRNDPLKRLMLEHGDVVVWGG ESRLFYHGIQPLKPGDHPVAGAFRYNLTFRQAA >gi|333596725|gb|GL892087.1| GENE 850 946925 - 947983 1086 352 aa, chain - ## HITS:1 COG:Zada_1 KEGG:ns NR:ns ## COG: Zada_1 COG2169 # Protein_GI_number: 15802766 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 183 1 183 184 249 66.0 5e-66 MKNTTYLTDEDRWQAVQSRDPHADNQFVFAVQTTGIYCRPSCRARHALRINVCFYPDAHL AAQAGFRPCKRCRPDQGDPMAQKKATIALACRLLEQEAALNLEALAQQVAMSPFHLHRVF KSVTGMTPKAWQQAAREQRLRSLLAQGGKITDAVLAAGFPDGSSYYRKADGALGMTAKQY RNGDAAVRYAISDCSLGRCLVAESERGICAILLGDDDTTLMAELLSLFPLAVRDPMEGAF AGRVRQVIASVDSRGTPLTLPLDIRGTAFQQQVWQALRAIPCGETASYQQVAKAIGKPNA VRAVAGACGANKLAIVIPCHRVVRNDGALSGYRWGAARKVLLLKREANNPEG >gi|333596725|gb|GL892087.1| GENE 851 948056 - 949111 1067 351 aa, chain - ## HITS:1 COG:ECs3103 KEGG:ns NR:ns ## COG: ECs3103 COG1477 # Protein_GI_number: 15832357 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 547 77.0 1e-155 MDMTFLRASVLATVLLLTACDSSTQPAKIEAPAATVLEGKTMGTFWRVSVMDLDKARVDE LRAKIQAQLDADDQLLSTYKNDSALMRFNRSSSTSLWPVSEAMADIVTESMRVGYKTNGA MDVTVGPLVNLWGFGPNKQPVTTPDQAAIDDARARTGLQHLAVISQYGQQYLQKDIPDLF VDLSTVGEGYAADHLAALMAQEGIPRYLVSVGGALVSRGMNASGRPWRVAIQKPTDQQNA VQAIVDINGHGISTSGSYRNYYELDGKRISHVIDPQTGRPITHNLVSVTVIAPTALEADA WDTGLMVLGTEKAKEVVRQEGLAVYMITKEADGFKTWSSPQFNSFLVSEKN >gi|333596725|gb|GL892087.1| GENE 852 949226 - 950317 1534 363 aa, chain - ## HITS:1 COG:ECs3104 KEGG:ns NR:ns ## COG: ECs3104 COG3203 # Protein_GI_number: 15832358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 363 1 367 367 561 87.0 1e-160 MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDDDSADGDQTYMRLG FKGETQVNDQLTGYGQWEYQIQGNSGENENNSWTRVAFAGLKFADAGSFDYGRNYGVVYD VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNQDFFGLVDGLNFALQYQGKNGSPSGE GQTNNGRDALRQNGDGYGGSLTYDLGEGFALGTAVTSSKRTADQNAPGYFGEGDRAETYT GGLKYDANNIYLAAQYTQTYNATRVGDQGWANKAQNFEVVAQYQFDFGLRPSVAYLQSKG KDIENYGDQDILKYVDVGATYYFNKNMSTYVDYKINLLDENDFTRQTGIGTDDIVALGLV YQF >gi|333596725|gb|GL892087.1| GENE 853 951061 - 953733 2842 890 aa, chain + ## HITS:1 COG:STM2269_1 KEGG:ns NR:ns ## COG: STM2269_1 COG0642 # Protein_GI_number: 16765596 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 700 1 699 699 1057 81.0 0 MSQTETTAPSKFSLLPGSITRFFLLLIVVLLVTMGVMVQSAVNTWLKDKSYQIVDITHAV HKRIDTWRYATWQIYDNIAAAPATSSGEGLQETRLKQDVYYLEKPQRKTEALIFGSHDSA TLEMTQRISSYLDTLWGAETVPWSMYYLNGQDNSMILVSTLPLKDLSSGFKETTVGSIVD SRRAEMLQQANALDERESFSSLRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PDMPLDSFRLEPDNSTQNMRTPSDKEGADSVAISFNGSKIEIASSLNSTGMRLVWQVPFG TLMLDTLQNILLPLLLNIGLLALALFGYSTFRFQSGRQSDSTSVSAGTSNELRVLRALNE EIISVLPLGVLVHDQDANRTVMSNKIADHLLPHLNLQNITAMADQHQGVIQATINNELYE IRQFRSQVASRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQHGRAAFMQNIGDAFKQPLK SLATQIADLSTPESRQLSSQADSLVRLVDEIQLANMLENDIWKGTPTLFSIQDLIDEVVP EVLPVIKRKGLQLLINNHLPANDERHGDRDALRRILMMLIQYAVTTTQIGKITLEVSTDE STDDRLTFRILDTGEGVTVSEIDNLHFPFLNDTQRDHYGKANALTFWLCDQLARKLGGHL NIKARESLGTRYSLHVKMAANPQEEDEERLLDDVVVMVDVTSSEIRNIVVRQLENWGASC ITPDERLASQEFDLFLTDNPSNLTASGLLLSDDEPGVRKIGPGQLRVNFNMSNAMQEAVL QLIEENLAQEEILESPLGGDENAELHASGYYSLFVDTVPDDVKRLYTESAAQDFAALAQT AHRLKGVFAMLNLVPGKQLCETLEHLIREKDASGIEKYISDIDAYVKSLL >gi|333596725|gb|GL892087.1| GENE 854 953750 - 954400 794 216 aa, chain + ## HITS:1 COG:STM2270 KEGG:ns NR:ns ## COG: STM2270 COG2197 # Protein_GI_number: 16765597 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 392 97.0 1e-109 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP GDKYGDGITLIKYIKRHFPDISIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK TISSQKKSAMMKLGVDNDIALLNYLSSVTLSATDKD >gi|333596725|gb|GL892087.1| GENE 855 954513 - 957359 3351 948 aa, chain - ## HITS:1 COG:STM2271_1 KEGG:ns NR:ns ## COG: STM2271_1 COG0642 # Protein_GI_number: 16765598 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 698 1 698 699 1280 89.0 0 MKYLVSFRTTLKVSRYLFRALALLLWLLVALLSVFYIVNALHQKEAEIRQEFNLSSDQAQ RYIQRTSDVMKELKYIAENRLTAENGILAIRSRDEKTEVPDFEPLFPDSDCSAMGKAWRG SLESLSWFMRYWRDNFSAAYDLNRVYLIGNENLCMADFGLRDMPVEREDALKSLHERIVK YRNAPQEERGNNIFWISQGPRMGVGYFYALTPVYLGNRLQALLGIEQTIRMENFFTPGSL PMGVTILDENGHPLISLAGPENRLKVEPSWMQERSWFGYTSGFRELVLKKSLPPSSLSIV YSLPVDKVLERIRILILNAILLNIAVGVALFMLARMYERRIFIPAEADAQRLEEHEQFNR KIVASAPVGICILRTQDGTNILSNELAHNYLNMLTHEDRQRLTQIICGQQVNFVDVLTST HTNLQISFVHSRYRNENVAICVLVDVSARVKMEESLQDMAQAAEQASQSKSMFLATVSHE LRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEP REFSPREVMNHICANYLPLVVRKQLGLYCFIEPDVPLTLNGDPMRLQQVISNLLSNAIKF TDIGCIVLHVCRAGEYLTIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAI CEKLISMMDGDISVDTEPGMGSQFTIRIPLYSAHYPAKTTVDGLSDKHCWLAVHNASLHD FLTSMLTSSGVRVSRYEGQTPDADDMLITDVEPEQAWAGRGVVMFCRRHIGIPIERSPGV WVHSVATPHELLGLLARIYSVQLEDSDGATVLASPDELASVNDDMMILVVDDHPINRRLL ADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVV GVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLSVYAERVRKARQ >gi|333596725|gb|GL892087.1| GENE 856 957495 - 960131 3435 878 aa, chain - ## HITS:1 COG:STM2272 KEGG:ns NR:ns ## COG: STM2272 COG0188 # Protein_GI_number: 16765599 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Salmonella typhimurium LT2 # 1 868 1 868 878 1602 96.0 0 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT NIPPHNITEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEIKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEILSAFVRHRRE VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKASLVARPWDLGNV AAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLEQIAELLHILGSAERLMEVIREELELVRDQFGDERRTEITANSSDINIEDLINREDVV VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKKTAL TEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKENAVRAMGRTATG VRGIKLAGEDSVVSLIVPRGEGAILTVTQNGYGKRTAESEYPTKSRGTQGVISIKVTERN GSVVGAVQVDDADQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA EPVDDEELDSIDGSVAEGDDEIAPETDTDDEAADDADE >gi|333596725|gb|GL892087.1| GENE 857 960278 - 961006 949 242 aa, chain + ## HITS:1 COG:ubiG KEGG:ns NR:ns ## COG: ubiG COG2227 # Protein_GI_number: 16130167 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Escherichia coli K12 # 1 240 1 240 240 460 91.0 1e-130 MNAEKSPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLFGKKV LDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHALESGVQVEYVQETVEEHAAKHA HQYDVVTCMEMLEHVPDPQSVVSACAKLVKPGGQVFFSTINRNGKAWLMAVVGAEYVLRM VPKGTHDVKKFIKPAELLGWVDQTWLKEQHMTGLHYNPLTDKFKLAPGVDVNYMLHTTAK ND >gi|333596725|gb|GL892087.1| GENE 858 961356 - 963641 3135 761 aa, chain + ## HITS:1 COG:STM2277 KEGG:ns NR:ns ## COG: STM2277 COG0209 # Protein_GI_number: 16765604 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 761 1 761 761 1526 95.0 0 MNQSLLVTKRDGTTERINLDKIHRVLDWAAEGLNNVSISQVELRSHIQFYDGIKTSDIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPKLYDHVVKMVELGKYDTHLL EDYTEEEFEQMNGFIDHWRDMNFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL FSNYPRETRLDYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD VPGLYDAFFADQDEFERLYTKYEKDDSIRKQRVKAVDLFSLMMQERASTGRIYIQNVDHC NTHSPFDPVVAPVRQSNLCLEIALPTKPLDDVNDENGEIALCTLSAFNLGAIKSLDELEE LAVLAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYWLAKNGKRYSDGSANNLT HQTFEAIQYYLMKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIVSEPLHLDWE GLRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGHVSIKASKDGVLRQVVPDYE TLGDNYELLWEMPNNDGYLQLVGIMQKFIDQSISANTNYDPTRFPSGKVPMQQLLKDLLT AYKFGVKTLYYHNTRDGAEDAQDDLAPSIQDDGCESGACKI >gi|333596725|gb|GL892087.1| GENE 859 963908 - 965038 1734 376 aa, chain + ## HITS:1 COG:STM2278 KEGG:ns NR:ns ## COG: STM2278 COG0208 # Protein_GI_number: 16765605 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 376 1 376 376 740 96.0 0 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR IDFQALPEHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS RSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGIAHYYDELIEMTSYWHLLGEGTHNVNG KTVTVNLRTLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIRLIARDEA LHLTGTQHMLNLLRSGTDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG QIDSEVNTDDLSDFQL >gi|333596725|gb|GL892087.1| GENE 860 965038 - 965292 216 84 aa, chain + ## HITS:1 COG:STM2279 KEGG:ns NR:ns ## COG: STM2279 COG0633 # Protein_GI_number: 16765606 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 84 1 84 84 135 83.0 2e-32 MSRVTLSLSGTEVLCQEEHPSLLVALEAHQVEVEYQCREGYCGSCRCRLVAGQVDWLTEP LAFISEGEILPCCCRAKGDIEIEM >gi|333596725|gb|GL892087.1| GENE 861 965376 - 966437 1510 353 aa, chain - ## HITS:1 COG:STM2282 KEGG:ns NR:ns ## COG: STM2282 COG0584 # Protein_GI_number: 16765609 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Salmonella typhimurium LT2 # 3 350 5 353 356 626 86.0 1e-179 MKLNQLATGLLLAGLMTGSALAADKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDL VMTKDDQLVVLHDHYLDRVTDVAERFPDRARKDGRYYAIDFTLAEIRSLKFTEGFEIENG KKVQVYPGRFPMGKSDFRIHTFQEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIA AKTLEVLKQYGYTSKKDKVYLQCFDAAELKRIKTELEPKMGMDLNLVQLIAYTDWNETQE KQPDGKWVNYNYDWMFKPGAMKQIAQYADGIGPDYHMLVAEGSTPGHVKLTAMVKEAHAS RMQVHPYTVRADQLPEYATDVNQLYEVLYNQADVDGLFTDFPDKAVSFLKDKR >gi|333596725|gb|GL892087.1| GENE 862 966449 - 967801 1762 450 aa, chain - ## HITS:1 COG:STM2283 KEGG:ns NR:ns ## COG: STM2283 COG2271 # Protein_GI_number: 16765610 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 449 1 449 452 834 93.0 0 MLSIFKPAPHRARLPEAEIDPLYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI AIMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM AWFNDWHAALYMPAFGAILVAIIAFALMRDTPQSCGLPPIEEYKNDYPDDYSEKHEEELT AKQIFMKYVLPNKLLWYIAVANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY AGIPGTLICGRMSDKVFKGNRGATGVFFMTLVTIATVVYWLNPPGNPGVDMACMIVIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSVLAVLLLIVVMIGEKRHHAEVLARRQ >gi|333596725|gb|GL892087.1| GENE 863 968051 - 969679 1721 542 aa, chain + ## HITS:1 COG:STM2284 KEGG:ns NR:ns ## COG: STM2284 COG0578 # Protein_GI_number: 16765611 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 542 1 542 542 912 85.0 0 MTIHDPRFSDVIIIGGGATGAGIARDCALRGLSVTLLERHDIATGATGRNHGLLHSGARY AVTDAESARECIAENQILRRIARHCVEPTNGLFITLPEDDLAFQQTFITACTAAGIQAEA IDPVQARRLEPSVNPALLGAVKVPDGTVDPFRLTAANMLDAREHGAQILTGHHVTGLIRE GNTVRGVRVFDAQYNEHRELYAAVVVNAAGIWGQRIAEYADLSIRMFPAKGSLLILDHRI NNHVINRCRKPSDADILVPGDTISLIGTTSMHVDYSDIDVNRVTAEEVDILLREGEKLAP VMAQTRILRAYAGVRPLVASDNDPSGRNVSRGIVLLDHAERDGMDGFITITGGKLMTYRL MAQWATDAVCRKLGNTTPCVTADKALPGSQQSTEKTLHKIISLPAPLRGSAIYRHGDRTP TWLGEGRLSRSLVCECEAVTAGEVQYAVENLTVNNLLDLRRRTRVGMGTCQGELCACRAA GLLQRFHATTSTQSLAQLSDFLNERWKGIQPVAWGDALRESEFTRWVYQGLCGLEKEHNH EI >gi|333596725|gb|GL892087.1| GENE 864 969669 - 970886 1249 405 aa, chain + ## HITS:1 COG:STM2285 KEGG:ns NR:ns ## COG: STM2285 COG3075 # Protein_GI_number: 16765612 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 400 1 414 419 536 67.0 1e-152 MKFDTVIVGGGLAGLLCGLKLTQRGLRCAIVTRGQSALHFSSGSLDLLGALSFADLPPEH PYRLTGAENMARFACETEHLLTACGACMQGDAEQNHQRVTPLGTLRAAWLSPEEVPVAPI AAERVRVVGISGFLDFQPHLAAASLRQQGVQVDTAEIDLPELDVLRENPSEFRAVNIARL LDNERYWPQLYAALRPLGETCDALFMPACFGLTDNRLWRWLSARLPCTLGLLPTLPPSVP GIRLHTQLQRRFVAQGGIWMAGDEVKKITLTEGAVSEIWTRNHGHIPLRARYTVLASGSF FSNGLLSSRDGVREAILGLDVRQSASRADWYQSDFFTPQPWQQFGVIVDSQLRPQLNGVP VENLYAIGSVLGGYDPVAQGCGGGVCAVTALHVAEQIIQRREGAK >gi|333596725|gb|GL892087.1| GENE 865 970883 - 972073 1151 396 aa, chain + ## HITS:1 COG:STM2286 KEGG:ns NR:ns ## COG: STM2286 COG0247 # Protein_GI_number: 16765613 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Salmonella typhimurium LT2 # 1 396 1 396 396 734 87.0 0 MNDTRFESCIKCTVCTTVCPVSGVDPRYPGPKQAGPDGERLRLKDGALYDEALKYCINCK RCEVACPSDVKIGDIIQRARARYSSQKPTLRDAILSHTDLMGSLSTPFAPVVNAATALKP VRRLLDATLKIDHHRSLPKYSHGTFRRWYKSVAAEQAQFAEQVAFFHGCYVNYNHPQLGK DLLKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQARSNVTSLREAIVGKGIPVLAT SSTCTFTLRDEYPHLLDVDNTGLREHIELATRFLWRKLDSGQTLPLGKLPLKVVYHTPCH MEKMGWSLYTLELLRLIPGLELTVLDSRCCGIAGTYGFKRENYPTSQAIGAPLFRQIEES GADMVVTDCETCKWQIEMSTSKRCEHPITLLAKALA >gi|333596725|gb|GL892087.1| GENE 866 972105 - 973304 1313 399 aa, chain - ## HITS:1 COG:yfaY KEGG:ns NR:ns ## COG: yfaY COG1058 # Protein_GI_number: 16130184 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Escherichia coli K12 # 1 396 1 396 400 659 82.0 0 MINVEMLSTGDEVLHGQIIDTNAAWLADLFFEQGLPLTRRNTVGDNLESLVNVLRERSEH CDVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLAQMERFFSERGRVMAPSNRKQAE IPASAELIDNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEQQILPRLRARFTLPEPPL CLRLTTFGRSESDLAQSLDHLQLPPGVSMGYRSSMPIIELKLTGPASEKAAMLALWPEVQ RVAGESLIFEGTEGLPAQIAAHLQSRQLSVTLSEQFTGGLLALQLTRAGAPLLASEVVPF QQESLAQTSRWASERRVKHFAGLALFVGGLDEEHLNFALATPEGTHALRVKMSITRHSLA VRQEVCAMMALNMLRRWLNGKEVASEHGWINVVESLFVE >gi|333596725|gb|GL892087.1| GENE 867 973399 - 973938 873 179 aa, chain - ## HITS:1 COG:no KEGG:ECL_03537 NR:ns ## KEGG: ECL_03537 # Name: not_defined # Def: YfaZ family protein # Organism: E.cloacae # Pathway: not_defined # 1 179 1 179 179 287 95.0 1e-76 MKKVALMGLGLMFVSAAANAISFNGSAGEDYTHLGFGLGTDSAGLAMTGGWTHNDDDGDA ASLGLGFNVPLGPFLATIGGKGIYTNPNDGDEGYAAAVGGGLQWKIGDSFGLFGEYYYSP DSLSSGIDSYQEANAGARWTIMRPITIEAGYRYLNLAGKDGNRDNALADGPYVGVSAGF >gi|333596725|gb|GL892087.1| GENE 868 974068 - 975477 1345 469 aa, chain - ## HITS:1 COG:STM2784 KEGG:ns NR:ns ## COG: STM2784 COG0642 # Protein_GI_number: 16766095 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 469 1 469 471 644 79.0 0 MRWVKPQSLYLQLLLFLGLPLLLLWGLSAFNSYVSALQAATQAYDRTLLSSARTVSERLV VHNGKLQVNVPWVVLDSFELNMNDRLYYKVVDPDGRTISGYDDLPNMPPSTSRTTHYPAL AWFYHTEYRGQAIRVAKLLQPVNEDSVFGMAEIYVAETLQSRRYLATQLLFSSLVSQGLL VLLTLVLTAWLLRRVLRPMRQLSSLMVRREPGLLAPLPELLPWSETRLLIVAFNRYIDRL RGVLSRQARFNADASHQLKTPLAVLKTQVSVALTRNDPALWQESLRAMNVTLDNTIVLTE RLLQLSAVKRKEQGERQFAPVDLVQVVQNCCFSRLTQARSKGIDLGYDGVQQPVMIEGDD VLLGELCANLLENAIKYTPEQGIVTVYLRTDNDAVELSVEDSGPGIAEDQISQAMLPFHR LDNVGDAAGSGIGLALANDIARMHRSHLQLMPSENLGGLRVKMRFLMLV >gi|333596725|gb|GL892087.1| GENE 869 975464 - 976138 678 224 aa, chain - ## HITS:1 COG:STM2785 KEGG:ns NR:ns ## COG: STM2785 COG0745 # Protein_GI_number: 16766096 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 224 1 224 224 345 83.0 3e-95 MRLLLAEDNRELAHWLEKALVQNGFAVDCVNDGRAADHLLQGENYAVAILDIGMPGFDGL EVVHRLRKRGQTLPVLFLTARSNVADRVKGLNAGADDYLPKPFELEELDARLRALLRRSE GRTQERQRLGELEYDDEGFFLLRDEPLSLTPRELSLLKVLMHRRTRPVSRQQLFDQVFSL NDDVSPESIDLYIHRLRKKLTGSGVRIITLRGLGYVLECGDEVG >gi|333596725|gb|GL892087.1| GENE 870 976291 - 977271 1383 326 aa, chain + ## HITS:1 COG:STM2786 KEGG:ns NR:ns ## COG: STM2786 COG3181 # Protein_GI_number: 16766097 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 326 1 325 325 590 89.0 1e-168 MKKQLLSTLAASVLLLSASVVQAQDAPSRTECIAPAKPGGGFDLTCKLIQVSLLETKAIE KPMRVTYMPGGVGAVAYNAIVAQRPAEAGTVVAFSGGSLLNLSQGKFGRYDVNDVRWLAT VGTDYGMIAVRADSPWKSLKDLLTAMEKDPNSVVIGAGASIGSQDWMKAALLAQQAKVDP HKMRYVAFEGGGEPVTALMGNHVQAVSGDLSEMVPYLSGDKIRVLAVFSENRLPGQLADV PTAKEQGYNLVWPIIRGFFVGPKVTDAEYQWWVDTFAKLQQTEEFKKQRDLRGLFEFNLN GKQLDEYVKKQVNDYREQAKAFGLAK >gi|333596725|gb|GL892087.1| GENE 871 977283 - 977714 588 143 aa, chain + ## HITS:1 COG:no KEGG:ECL_03608 NR:ns ## KEGG: ECL_03608 # Name: not_defined # Def: putative tricarboxylic transport membrane protein # Organism: E.cloacae # Pathway: Two-component system [PATH:enc02020] # 1 143 1 143 143 234 93.0 7e-61 MSDRIFAGIWLLLCIGGMFVAWQIHSEYSYEPVGPRPFPVGIVGLMLLCSVALLLRHPDT VEWPPRRTLQRLLVMVIVLLMYAWGFEWLGFPIATALLTMVIGILFNASLPAAGISGVVL GILLWYAFDRLLDVTLPLGAWFN >gi|333596725|gb|GL892087.1| GENE 872 977726 - 979240 2150 504 aa, chain + ## HITS:1 COG:STM2788 KEGG:ns NR:ns ## COG: STM2788 COG3333 # Protein_GI_number: 16766099 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 504 1 504 504 828 95.0 0 MDTWIYLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPINGVAILLPLAFALHLPAE SALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPMAQQGRGGVALSISAVSSF FGSMIAIGGIILFAPALAQWSLAFGPAEYFALMVFAIACLGSMMAQNPLKSFLSALIGLS LATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSVSEILLMLEHTSSGQTLVRKTGR MLFNAKEGAQCIGATLRSSVIGFFVGILPGAGATIASAITYMTEKKLSGNSDSFGKGDIR GVAAPEAANNASACGSFIPMLTLGVPGSGTTAVMMGALTLYNITPGPAMFTEQPDIVWGL IAALLIANVMLLVMNIPLIGLFTRMLTIPLWFLVPAIAAVSAVGVYAVHSTTFDLVLMVL LGVLGYILRKMHFPMSPLILGFVLGEMLEQNLRRALSISNGNMGILWESSVTKILLAMAI MVIVVPPVLRWVRRRQHKPQPDIG >gi|333596725|gb|GL892087.1| GENE 873 979241 - 980602 1268 453 aa, chain - ## HITS:1 COG:STM2305 KEGG:ns NR:ns ## COG: STM2305 COG0318 # Protein_GI_number: 16765632 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 1 447 1 449 455 627 69.0 1e-179 MSFTDWPWRHWRTRSANKPALRLDDITLSWSQLGERIDRLAAGFQSQGVTDGDGVMLLAH NHPQTLLAWLALLQCGARILPVNPQLPRPLLDVLLPQMTLRFALVLNGEYDGLPGLVLRE GEGQGGVTWRAERLASMTLTSGSTGLPKAAVHTCAAHLASAKGVLALMPYGGSDDWLLSL PLFHVSGQGILWRWLQGGGRLTVREKQPLEQALQGCTHASLVPTQLWRLLNSHHPVALKA VLLGGAEIPVALTEQAREQGIRTFCGYGLTEFASTVCAKEADGAPDVGSALPGRDVQVVN GEVWIRAESMAAGYWRDGALLPLVNEQGWFATRDRGEWHDGRLTILGRMDNLFFSGGEGI QPEALERVIATHPQVSQAFVVPLDDAEYGQRPVAVVECEPGTDITLLPEWVQGRLARFEQ PVHWLALPSELKNGGIKISRQALKQWVNALLRG >gi|333596725|gb|GL892087.1| GENE 874 980599 - 981564 937 321 aa, chain - ## HITS:1 COG:menC KEGG:ns NR:ns ## COG: menC COG1441 # Protein_GI_number: 16130196 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Escherichia coli K12 # 1 320 1 319 320 506 81.0 1e-143 MRCAQVYRWQIPMDAGVVLRERRLKTRDGFCVHLRQGEREGWGEIAPLPGFSLETLDEAQ AALMAWTYEWREGAAPALPDMPSAAFGISCALAELDGSLPDAANYRAAPLCTGDPDELFA LLSAMPGEKVAKIKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLRAQQFAKYVN PAYRSRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREADFAFAAEPGIRAVVIKPTLT GSLDKVREQVAAAHAAGLTAVISSSIESSLGLTQLARIAAWLTPDTVPGLDTLNLMQAQL IRQWPGSTLPCLDVGALEPLR >gi|333596725|gb|GL892087.1| GENE 875 981564 - 982421 1019 285 aa, chain - ## HITS:1 COG:STM2307 KEGG:ns NR:ns ## COG: STM2307 COG0447 # Protein_GI_number: 16765634 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Salmonella typhimurium LT2 # 1 285 1 285 285 579 94.0 1e-165 MIYPDEHMLYAPVEWQDCSEGYTDIRYHKSADGIAKITINRPQVRNAFRPLTVKEMIQAL ADARYDDTIGVIILTGEGEKAFCSGGDQKVRGDYGGYQDDAGTHHLNVLDFQRQIRTCPK PVVAMVAGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYNAQEALDMGLVNTVVPIADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKRQPDFSKYKRNP >gi|333596725|gb|GL892087.1| GENE 876 982418 - 983194 445 258 aa, chain - ## HITS:1 COG:ECs3151 KEGG:ns NR:ns ## COG: ECs3151 COG0596 # Protein_GI_number: 15832405 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 356 71.0 3e-98 MILAGVSRPGKPGYPWLVFLHGFSGDCREWQAVGASLHDYPRLYLDLPGHGGSADTGVTG FAEVSELLSHTLVSYNILRYWLVGYSLGGRIAMFHACQHPAGLDGVIVEGGHPGLQDADA RQARLISDRRWASRFRSEPLEAVFADWYQQPVFASLTDDQRRALIALRSRNNGPRLAEML EATSLAVQPDLRPALIARDFSFDYLYGERDGKFAAIAAELNATRHAIPHAGHNAHRDTPE AVAASLAQILRYRTKDTL >gi|333596725|gb|GL892087.1| GENE 877 983191 - 984861 1738 556 aa, chain - ## HITS:1 COG:STM2309 KEGG:ns NR:ns ## COG: STM2309 COG1165 # Protein_GI_number: 16765636 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Salmonella typhimurium LT2 # 1 556 1 556 556 948 85.0 0 MSVSSFNRRWATVILEALTRHGVRHVCIAPGSRSTPLTLAAAENRAFIHHTHFDERGLGH LALGLAKVSKAPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAI RQPGIFASHPAQTVSLPRPTQDIPASWLVSTLDHAMNALRSGGLHINCPFAEPLYGEMNE TGLAWQQQLGDWWESEKPWLREQTHLESAKQRDWFFWRQKRGVVIAGRMSAAEGKLAAEW AQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTELAQAQIVVQLGSSLTGKRLLQWQAT CTPEEYWLVDPLEGRLDPAHHRGRRLVSDIDSWLELHPAEKRQPWAVAIPALARQAWELT TAQCEAFSEAGLAHRIRNYLPAQGQLFVGNSLVVRLIDAFSKLPAGYPVYSNRGASGIDG LISTAAGVQRASAKSTLAIVGDLSALYDLNALALLRQASAPFVLIVVNNNGGQIFSLLPT PQSERERFYLMPQNVQFEHAAAMFSLKYHRPENWEALETALNTAWRQPGATLIELVVNDS DGAQKLQHLLAQVSHL >gi|333596725|gb|GL892087.1| GENE 878 984950 - 986245 942 431 aa, chain - ## HITS:1 COG:STM2310 KEGG:ns NR:ns ## COG: STM2310 COG1169 # Protein_GI_number: 16765637 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Salmonella typhimurium LT2 # 1 431 1 430 431 548 66.0 1e-156 MHSIFLALQSLRTQLAQALPATPGLRHFDVSFPLNDAFDPLAWLGVQRCYPQFYWQQRSG DEELAALGSLARFDSLASASRFLHTHDVAHDTRICGLNAFNPAQGVLFLPRLLWRRSAGV ATLRLQLWSETSLCEDAREALNFIDNLRDAAPIRPLSVQIVQETHHPEKPEWLALIRQAT ETLARGDFEKVVLARATDVQCQQPVNAIALMAASRALNLNCYHFCMVFDASNAFLGSTPE RLWRRRGTLLRTEALAGTVASHSDDKQAQRLGDWLMNDDKNQRENMLVVEDICQRLQHYT RTLEVLPAQVLRLRKVQHLRRCIWTELIQPDDEQCLHILQPTAAVAGLPRQAAREFIANV EPFDREWYAGSAGYLSPDQSEFCVALRSARVRDDALRLYAGAGIVSGSDPEQEWQEIENK AAGLRSLLLRD >gi|333596725|gb|GL892087.1| GENE 879 986332 - 986637 456 101 aa, chain - ## HITS:1 COG:STM2311 KEGG:ns NR:ns ## COG: STM2311 COG4575 # Protein_GI_number: 16765638 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 84 3 86 103 136 88.0 1e-32 MSFQSWDTRVDDDLTLLSETLEEVLRSSGDPADQKYIELKARAEQALHDVKNRVSNASDN YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR >gi|333596725|gb|GL892087.1| GENE 880 986688 - 987152 681 154 aa, chain - ## HITS:1 COG:ECs3155 KEGG:ns NR:ns ## COG: ECs3155 COG2153 # Protein_GI_number: 15832409 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 250 75.0 6e-67 MIQWQDLHHSELTIQSLYALLKLRCEVFVVEQTCPYQDIDGDDLVGENRHILGWRDNELV AYARILKSEDDFAPVVIGRVIISGRARGEKLGYQLMEKTLDACQKQWPDKALYLGAQAHL QSFYGHFGFTPVTDIYDEDGIPHIGMAREAKQAQ >gi|333596725|gb|GL892087.1| GENE 881 987224 - 988141 873 305 aa, chain + ## HITS:1 COG:elaC KEGG:ns NR:ns ## COG: elaC COG1234 # Protein_GI_number: 16130203 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli K12 # 1 305 7 311 311 494 77.0 1e-140 MELIFLGTSAGVPTRSRNVTAILLDLKHPTRGGLWLFDCGEGTQHQLLHTAYHPGKLDKI FITHLHGDHLFGLPGLLCSRSMAGNANPLTIYGPVGIQEFVETTLRLSGSWTDYPLEVVE IGEGLVFDDGDYQVRAYPLNHPVECYGYRVQEHDKPGALNAAALQADGVKPGPLFHRLKQ GETVTLEDGRVINGQEYLAPPQPGKKLAIFGDTAPCPSARRLAEGVDVMVHEATLEAAME EKANSRGHSSTCQAAQLAREAGVGKLIVTHVSSRYDVRGCESLLAECREVFPACELAEDF AQVSV >gi|333596725|gb|GL892087.1| GENE 882 988206 - 989210 1370 334 aa, chain + ## HITS:1 COG:STM2314_1 KEGG:ns NR:ns ## COG: STM2314_1 COG0835 # Protein_GI_number: 16765641 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Salmonella typhimurium LT2 # 1 189 1 189 189 327 85.0 3e-89 MDNFQKDIDDRANLTLSNRFELLLFRLGTSLNENKSELFGINVFKLREIVPMPTFTKPAG MKSPLMGMVNIRDQVIPVIDLAAVAGCKPATGLNILLITEYARSVQAFAVESVENIMRLD WKQVHAAETAVSGRYITSIACLDEKTDTNDLAMVLDVEQILYDITPANHDLHATHLETTK FNIKPGSVAIVAEDSKVARSMLEKGLQAMEIPAQLHITGKDAWEKITQLAAQAQAEGVPV TDKIALVLTDLEMPEMDGFTLTRKIKTDPVLKDIPVVIHSSLSGNANEDHIRKVKADGYV AKFELNELSSVIEEVLDRSMKKIEGPLISRKQLA >gi|333596725|gb|GL892087.1| GENE 883 989330 - 990787 2319 485 aa, chain - ## HITS:1 COG:YPO2543 KEGG:ns NR:ns ## COG: YPO2543 COG1007 # Protein_GI_number: 16122761 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Yersinia pestis # 1 485 1 487 487 665 81.0 0 MTITPQQLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVLGLNAALVSLWFVGQAGA MDVTPLMRVDGYAMLYTGLVLLASLATCTFAYPWLEGYNDNKEEFYLLVLIAALGGILLA NANHLAALFLGIELISLPLFGLIGYAFRQKRSLEASIKYTILSAAASSFLLFGIALLYAQ TGNLSFMALGKSLGDGMMHEPLLLAGLGMMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYAPVGDSEAVRVVLGIIAFVSIIFGNLMALSQTNIKRLLGY SSISHLGYLLVALIALQSGEMSMETVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLF SYRGLFWHRPILSAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAGLWWLTAGVVIGSAI GLYYYLRVAVSLYLSAPQQLNRDAPTNWQYSAGGIVVLISALLVLIFGVYPQPLIEIVQR AMPLM >gi|333596725|gb|GL892087.1| GENE 884 990794 - 992323 1993 509 aa, chain - ## HITS:1 COG:STM2317 KEGG:ns NR:ns ## COG: STM2317 COG1008 # Protein_GI_number: 16765644 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Salmonella typhimurium LT2 # 1 509 1 509 509 867 96.0 0 MLLPWLILIPFIGGFLCWQTERFGVKMPRWIALITMGLTLALGLQLWLQGGYSLTQSAGL PQWQSEFILPWIPRFGITIHLAIDGLSLLMVVLTGLLGVLAVLCSWREIEKYQGFFHLNL MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA SGLVMLIAILALVFVHYNATGVWTFNYEDLLKTPMSHGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY GAWMAFTQYDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG QLYERLHTRDMRMMGGLWGKMKWLPALSMFFAVATLGMPGTGNFVGEFMILFGSFNVVPT ITVISTFGLVFASVYSLAMLHRAYFGKAKSEIAAQELPGMSLRELFIILLLVVLLVLLGF YPQPILDTSHSAMGNIQQWFVNSASTTRP >gi|333596725|gb|GL892087.1| GENE 885 992492 - 994333 2457 613 aa, chain - ## HITS:1 COG:STM2318 KEGG:ns NR:ns ## COG: STM2318 COG1009 # Protein_GI_number: 16765645 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Salmonella typhimurium LT2 # 1 613 1 613 613 1015 93.0 0 MNMLALTIIFPLIGFVLLAFSRGRWSENLSATVGMGSVGLAALVTAYAGIDFFNNGRQAY SVPLWNWMSVGNFNIGFNLVLDGLSLTMLSVVTGVGFLIHMFASWYMRGEEGYSRFFAYT NLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNSAAAMKAFVVTRVGDVF LAFALFILYNELGTLNFREMVELAPAHFEAGNNMLWWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEILHLVGIVGAVTLVLAGFAALV QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLSSGSVILACHHEQ NIFKMGGLRKSIPLVYVCFLVGGAALAALPLITAGFFSKDEILAGAMANGHINLMVAGLV GAFMTSLYTFRMIFIVFHGKEQIHAHAGKGITHHLPLIVLLVLSTFVGAMIVPPLQGVLP ATTELEHGRVLTLEITSGVVAIAGILIAAWLWLGKRTLVTAVANSAPGRLLGTWWYNAWG FDWLYDMIFVKPFLGIAWLLKRDPLNSLMNIPAILSRFAGKGLLFSENGYLRWYVASMSI GAVVVLALLMVLR >gi|333596725|gb|GL892087.1| GENE 886 994330 - 994632 386 100 aa, chain - ## HITS:1 COG:STM2319 KEGG:ns NR:ns ## COG: STM2319 COG0713 # Protein_GI_number: 16765646 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Salmonella typhimurium LT2 # 1 100 1 100 100 146 99.0 7e-36 MIPLTHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQV MYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSELRG >gi|333596725|gb|GL892087.1| GENE 887 994629 - 995183 748 184 aa, chain - ## HITS:1 COG:STM2320 KEGG:ns NR:ns ## COG: STM2320 COG0839 # Protein_GI_number: 16765647 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Salmonella typhimurium LT2 # 1 184 1 184 184 311 97.0 5e-85 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFALGAHFAGALEIIVYA GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLAVIVYAILGVNDQGID GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRTDDRAKRKT EERA >gi|333596725|gb|GL892087.1| GENE 888 995194 - 995736 696 180 aa, chain - ## HITS:1 COG:STM2321 KEGG:ns NR:ns ## COG: STM2321 COG1143 # Protein_GI_number: 16765648 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 368 98.0 1e-102 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGSERC VACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF ELGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP >gi|333596725|gb|GL892087.1| GENE 889 995751 - 996728 1185 325 aa, chain - ## HITS:1 COG:STM2322 KEGG:ns NR:ns ## COG: STM2322 COG1005 # Protein_GI_number: 16765649 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Salmonella typhimurium LT2 # 1 323 1 323 325 581 95.0 1e-166 MSWLTPDLIDILLSILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMIKMFFKEDWVPRFSDRVIFTLAPMIAFTSLLLAFAIVPVSPTWVVADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV NNQADIWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALMVTLFFGGWHGPFLPPFIWFALKTAFFMMMFILIRAALPRPRYDQVMSF GWKVCLPLTLVNLLVTAAVILWQQP >gi|333596725|gb|GL892087.1| GENE 890 996725 - 999448 3340 907 aa, chain - ## HITS:1 COG:ECs3167 KEGG:ns NR:ns ## COG: ECs3167 COG1034 # Protein_GI_number: 15832421 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Escherichia coli O157:H7 # 1 906 3 909 910 1740 90.0 0 MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPAAEGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGQDLGVYGAHDNVY FGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSLGCNTSPG ERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQ GAADILRQSKKVIGIGSPRASIESNFALRELVGAENFYTGIAQGEQERLQLVLKVLREGG IHTPALREIESYDAVLVLGEDLTQTGARAALAVRQAVKGKAREMAAAQKVADWQIAAILN IGQRAKHPLFVTNVDNTRLDDIAAWTYCAPVEDQARLGFAIAHALDNNSPAVELDRDLQN KVDVIVQALAGAKKPLIISGTNAGSAEIIQAAANVAKALKGRGADVGVTMIARAVNSIGL GMIGGGSLEEALSELESGAADAVVVLENDLHRHASAARVDAALSKAPLVMVIDHQRTAIM DKAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSNTVMLESWRWLHSLHSTVQS REVDWTQLDHVIDAVVEKLPHLAGIKDAAPEASFRIRGQKLAREPHRYSGRTAMRANISV HEPRQPQDKDTMFAFSMEGNNQPSAPRSQIPFAWAPGWNSPQAWNKFQAEVGGSLRHGDP GVRLIEASDSGLDFFTTVPASFQAQEGHWRIAPYYHLFGSDELSQRSPVFQTRMPQPYIK LNPADAAKLGVNAGANIAFSYDGQTISLPLIISERLSAGQVGLPMGMPGIAPVLAGAHLD NLQEAKA >gi|333596725|gb|GL892087.1| GENE 891 999503 - 1000840 1602 445 aa, chain - ## HITS:1 COG:ECs3168 KEGG:ns NR:ns ## COG: ECs3168 COG1894 # Protein_GI_number: 15832422 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 885 95.0 0 MKTVIRTAETHPLTWRLRDDKQPVWLDEYQSKNGYAGARKALGGMAPDDIVNAVKDSGLK GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA FALKAYRGYIFLRGEYIEAAENLRRAIAEATEAGLLGKNILGTGFDFELFVHTGAGRYIC GEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAILANGVEWYQGIS SSKDAGTKLMGFSGRVKNPGVWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARESCGWCTPCRDG LPWSVKILRAIERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFRDEFE AGIKQPFSNTHSINGIQPNLLKARW >gi|333596725|gb|GL892087.1| GENE 892 1000837 - 1001337 588 166 aa, chain - ## HITS:1 COG:STM2325 KEGG:ns NR:ns ## COG: STM2325 COG1905 # Protein_GI_number: 16765652 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Salmonella typhimurium LT2 # 1 166 1 166 166 322 93.0 2e-88 MHENQQPQTEAFELSEAERAAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIYEIAK VLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIQAAIEKKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPTMMIDEDTHSHLTPEAIPDLLEQYK >gi|333596725|gb|GL892087.1| GENE 893 1001340 - 1003130 2216 596 aa, chain - ## HITS:1 COG:nuoC_2 KEGG:ns NR:ns ## COG: nuoC_2 COG0649 # Protein_GI_number: 16130221 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Escherichia coli K12 # 198 596 1 399 399 837 98.0 0 MTDLTAQEAAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWVKREQLLEVVDFL KKLPKPYVMLFDLHGMDERLRTHRQGLPAADFSVFYHLISIDRNTDIMLKVALSENDMHL PTITKLFPNANWYERETWEMFGMTFDGHPHLTRIMMPQTWTGHPLRKDYPARATEFDPFE LTKAKQDLEMEALTFKPEDWGMKRGTENEDFMFLNLGPNHPSAHGAFRIILQLDGEEIVD CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALRNSILKGRSQGVAAYGAKEALEWGT TGAGLRATGIDFDVRKARPYSGYENFDFEVPVGGGVSDCYTRVMLKVEELRQSLRILEQC LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAQESFQMIEATKGIN SYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR >gi|333596725|gb|GL892087.1| GENE 894 1003232 - 1003906 787 224 aa, chain - ## HITS:1 COG:STM2327 KEGG:ns NR:ns ## COG: STM2327 COG0377 # Protein_GI_number: 16765654 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 224 1 220 220 449 96.0 1e-126 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKSVYMGKLEHAMHDMVNWGRKNSIWP YNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQ MLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI GKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI >gi|333596725|gb|GL892087.1| GENE 895 1003922 - 1004362 381 146 aa, chain - ## HITS:1 COG:STM2328 KEGG:ns NR:ns ## COG: STM2328 COG0838 # Protein_GI_number: 16765655 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Salmonella typhimurium LT2 # 1 146 1 147 147 258 93.0 3e-69 MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARHKNTPFESGIDSVGTA RLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFILVLLAGLVYLVRI GALDWTPVRSRREHINPENSISNRQQ >gi|333596725|gb|GL892087.1| GENE 896 1004994 - 1005908 601 304 aa, chain - ## HITS:1 COG:ECs3173 KEGG:ns NR:ns ## COG: ECs3173 COG0583 # Protein_GI_number: 15832427 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 304 9 312 312 518 85.0 1e-147 MNLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLT EHGIQLLGYARKILRFNDEACMSLMFSNLQGVLTLGASDESADTILPFLLNRISSVYPKL ALDVSVKRNAFMVEMLKENEVDLVVTTHRPGQFDCLTLRTSPTHWYCAAEYVLQKGEPIP LVLLDDPSPFRDMVLAALNEASIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR VLGHSEGLPSLPDTEYLLCHNAASNNELAKVVFEAMENYHNPWQYAAVTPEGGDDSLIVE GDFE >gi|333596725|gb|GL892087.1| GENE 897 1006870 - 1008084 1474 404 aa, chain + ## HITS:1 COG:STM2331 KEGG:ns NR:ns ## COG: STM2331 COG0436 # Protein_GI_number: 16765658 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 835 97.0 0 MSPIEKSSKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGD EMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNP TGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDAAQHHSIAALAPDLLTVTFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFI VPGGRLYEQRNRAWELINDIPGVSCVKPNGALYMFPKIDAKRFNIHDDQKMVLDFLLQEK VLLVQGTAFNWPWPDHVRIVTLPREDDLEMAISRFGRFLSGYHQ >gi|333596725|gb|GL892087.1| GENE 898 1008202 - 1008801 766 199 aa, chain + ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 349 92.0 2e-96 MSQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRRFNGQVNAER IALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLIDMVPEELRDIFEPLI DEHQYTEEEKSLVKQADALCAYLKCLEELSAGNNEFLLAKSRLEKTLDARRSEEMDYFMQ VFVPSFHLSLDEISQDSPL >gi|333596725|gb|GL892087.1| GENE 899 1008884 - 1010641 1997 585 aa, chain - ## HITS:1 COG:ECs3176 KEGG:ns NR:ns ## COG: ECs3176 COG0471 # Protein_GI_number: 15832430 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 585 26 610 610 944 87.0 0 MDAVALFVIVAFVLSGTLSLPEAFSGFSDPNVILIAALFIIGDGLVRTGVATMMGSWLVK VAGSSETKMLIYLMLTVAGLGAFMSSTGVVAIFIPVVLSVCMRMQISPSRLMMPLSFAGL ISGMMTLVATPPNLVVNSELIREGLEGFSFFSVTPIGLVVLVLGIIYMLLTRFALKGEKQ DKAKEGWKRRSFRDLIKEYHLTGRARRLAIRPGSPMVGQRLDDLKLRERYGANVIGVERW RRFRRVIVNVNGVSEFRARDVLLIDMSTADVDLREFCSEQLLEPMVLRGEYFSDQALDVG MAEVSLIPESELLGKTVREIGFRTRYGLNVVGLKRDGVALEGAVVDEPILLGDIFLVVGN WKLISQLGQKGRDFVVLNMPIEESDASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAII ACLLMGKFRCIDAESAYKAIHWPSIILIVGMMPFALALQKTGGVDLIVKGLMDAGGGYGP YLMMVCLFVMCATIGLFISNTATAVLMAPIALAMAKSMGVSPYPFAMMVAMAASAAFMTP VSSPVNTLVLGPGNYKFSDFVKLGVPFTVLVMLVCVVLIPVLFPF >gi|333596725|gb|GL892087.1| GENE 900 1010792 - 1011451 512 219 aa, chain - ## HITS:1 COG:STM2334 KEGG:ns NR:ns ## COG: STM2334 COG0637 # Protein_GI_number: 16765661 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 215 7 221 225 303 73.0 1e-82 MQCKGFLFDLDGTLVDSLPVVERSWCHWADRHGIDHQDVLNFIHGKQAITSLRHFLAGRS EDEIQAEFRYLEQIEATDTEGITALPGARELLEHLNEAQIPWAIVTSGSIPVAHARHKAA GLPTPDVFITAERVKRGKPEPDAFLLGAELLGLGPAACVVVEDAAAGVLAGLNAGCHVIA VNVPADSPRLNEADFVLNTLTALDVSKASDGIVTVSLKM >gi|333596725|gb|GL892087.1| GENE 901 1011463 - 1011957 652 164 aa, chain - ## HITS:1 COG:ECs3178 KEGG:ns NR:ns ## COG: ECs3178 COG3013 # Protein_GI_number: 15832432 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 164 7 170 170 293 89.0 7e-80 MEMTHAQRLILSNQYKMMTMLDPDNAARYSRLQTIVERGFGLQMRELDREFGELKEETCR IVIDIMEMYHALHVSWTNLKDQQTIDERRVTFLGFDAATEARYLSYVRFMVNTEGRYTHF DAGTHGFNAQTPMWDKYQRMLSAWHACPRQYHLSSNEIQQIINA >gi|333596725|gb|GL892087.1| GENE 902 1012050 - 1012505 546 151 aa, chain - ## HITS:1 COG:STM2336 KEGG:ns NR:ns ## COG: STM2336 COG3092 # Protein_GI_number: 16765663 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 151 1 151 151 277 92.0 4e-75 MSTPEIPSVNFFSLFRRGQHYSKTWPMEKRLAPMFIENRTIRATRYAIRFMPPIAVFTLC WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPSILHWFYEVRGKLEEAGQAL APVEGKPDYQALADTLKRAFKQLDKTFLDDL >gi|333596725|gb|GL892087.1| GENE 903 1012843 - 1014045 1480 400 aa, chain + ## HITS:1 COG:STM2337 KEGG:ns NR:ns ## COG: STM2337 COG0282 # Protein_GI_number: 16765664 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 400 1 400 400 783 97.0 0 MSSKLVLVLNCGSSSLKFAIIDALNGDEYLSGLAECFHLPEARIKWKMDGSKQEAALGAG AAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDDSVIQGIKDSASFA PLHNPAHLIGIAEALKSFPNLKEKNVAVFDTAFHQTMPEESYLYALPYSLYKEHGVRRYG AHGTSHFYVTQEAAKVLNKPVEEVNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM GTRSGDIDPAIIFHLHDTLGMSVDDINKMLTKESGLLGLTEVTSDCRYVEDNYAEKADAK RAMDVYCHRLAKYIGSYTALMDGRLDAVIFTGGIGENAAMVRELSLGKLGVLGFEVDHER NLAARFGKSGFINKEGTRPAIVIPTNEELVIAQDAHRLTA >gi|333596725|gb|GL892087.1| GENE 904 1014137 - 1016263 2596 708 aa, chain + ## HITS:1 COG:STM2338_1 KEGG:ns NR:ns ## COG: STM2338_1 COG0857 # Protein_GI_number: 16765665 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Salmonella typhimurium LT2 # 1 386 6 391 391 716 94.0 0 MLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRAGGDAPDQTTTIVRKNSNLPA AEPLKMSHVESLLSSNQKDVLMEEIIANYHANAQDAEVVLVEGLVPTRKHQFAQSLNFEI AKTLNAEIVFVMSQGTDTPEQLKERIELTRSSFGGAKNTSITGVIVNKLNAPVDEQGRTR PDLSEIFDDSSKAKVIKVDPAKLQDSSPLPVLGAVPWSFDLIATRAIDMARHLNATIVNE GDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEIGAILLT GAYEMDPRVSKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEKVQEYVA GYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRVVLPEGDEPRTVKAAAICAE RGIATCVLLGNPDEINRVAASQGVELGAGIEIVDPEVVRESYVARLVELRKNKGMTEAVA REQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLP EQVYVYGDCAINPDPTAEQLAEIAIQSADSAIAFGIEPRVAMLSYSTGTSGAGSDVEKVR EATRIAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKA VQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSSQQQ >gi|333596725|gb|GL892087.1| GENE 905 1016374 - 1017327 983 317 aa, chain - ## HITS:1 COG:STM2340 KEGG:ns NR:ns ## COG: STM2340 COG3958 # Protein_GI_number: 16765667 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Salmonella typhimurium LT2 # 1 317 1 317 317 584 91.0 1e-167 MIKVAPTGQKDAVEMRKVYAGFVAKQIEAGSEIIALEADLMSSMAMDGVARDYPQHVINC GIMEANVIGTAAGLSLTGRKPFVHTFTAFASRRCFDQLFMSLDYQRNNVKVIASDAGVTA CHNGGTHMSFEDMGIVRGLAHSVVLEVTDAVMFEDVLRQLIDLEGFYWVRTIRKQAPSVY APGSTFTIGKGNVLREGTDITLIANGIMVAEALEAARQLEQEGVSAAVIDMFTLKPIDRM LVKNYAEKTGRIVTCENHSIHNGLGSAVAEVLVESCPVPMRRVGVKERYGQVGTQDFLQK EYGLTAHDIVSAARELL >gi|333596725|gb|GL892087.1| GENE 906 1017320 - 1018150 942 276 aa, chain - ## HITS:1 COG:STM2341 KEGG:ns NR:ns ## COG: STM2341 COG3959 # Protein_GI_number: 16765668 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Salmonella typhimurium LT2 # 1 276 1 276 276 506 87.0 1e-143 MNENEITELARQIRLETLKSLTQLGFGHYGGSMSVVETLAVLYGAVMKIDPADPDWPERD YFVLSKGHAGPALYSTLAIKGYFPTEELSTLNQNGTRLPSHPDRLKTRGVDATTGSLGQG ISIAGGMALSHKLAGRPNRVFCIVGDGELNEGQCWEAFQFIAHHRLNNLTVFVDWNKQQL DGELDEIISAFDLEGKFRAFGFDVVTVKGDDIPALLEVTAPIPAADARPRVVILDSIKGQ GVPYLEQLSNSHHLRLTEESKAALNETIRQLEASHD >gi|333596725|gb|GL892087.1| GENE 907 1018147 - 1019538 1888 463 aa, chain - ## HITS:1 COG:STM2342 KEGG:ns NR:ns ## COG: STM2342 COG3037 # Protein_GI_number: 16765669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 462 1 462 463 707 94.0 0 MFILETLNFVVDILKVPSVLVGLIALIGLVAQKKAFSDVVKGTIKTILGFIVLGGGATVL VGSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGASTALIMAFGMVANIIVARFTRLK YIFLTGHHTFYMACMIGVILTVAGFEGVGLVFTGSLILGLIMAFFPAIAQRYMKRITGND EIAFGHFGTLGYVLSGWIGSKVGKGSRSTEEMNLPKNLSFLRDSSISISLTMMIIYLIMA VSAGREYVEATFSGGQNYLVYAIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSEKLVP NARPALDCPVVYPYAPNAVLIGFLFSFLGGIVGLFICGQFSWVLILPGVVPHFFTGATAG VFGNATGGRRGAMIGAFANGLLITFLPVLLLPVLGAIGFANTTFSDADFGAVGIVLGNLA RFLSPLAITGLVVVLFALLVAYNVFAKNKPANGNAQENPGAKS >gi|333596725|gb|GL892087.1| GENE 908 1019560 - 1019832 190 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative [Streptococcus pneumoniae SP3-BS71] # 1 79 2 80 94 77 51 2e-12 MKIMAICGSGLGSSFMVEMNIKKVLKKLEIEAEVEHSDLSSATPGAADLFVMAKDIAASA SVPESQLVVINNIIDINELEAQLRAWFERQ >gi|333596725|gb|GL892087.1| GENE 909 1019912 - 1020355 318 147 aa, chain - ## HITS:1 COG:STM2344 KEGG:ns NR:ns ## COG: STM2344 COG1762 # Protein_GI_number: 16765671 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 147 1 147 147 213 78.0 9e-56 MLKKWIYDTTITLQDSVVNWPQALELCAKPLLDLQVIAPEYVTAIIEQHHTLGPYYVLAP GLAMPHARPEEGAKGHGLSLLKLKQGVSFGAGEFDPVDVIVMLAAPDKHSHIEMISALAE LFSSDEDMAELHRANTLEEIKTVIDRF >gi|333596725|gb|GL892087.1| GENE 910 1020670 - 1021611 963 313 aa, chain + ## HITS:1 COG:STM2345 KEGG:ns NR:ns ## COG: STM2345 COG1609 # Protein_GI_number: 16765672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 313 27 339 339 560 92.0 1e-160 MTVSRALRTPEQVSDKLREKIEAAVQELGYMPNLAASALASASSWTIAMVVPNLSEAGCS EMFAGLQQVLQPAGYQIMLAESQHRLEQEEKLLETLLASNIAAAILLSVEHTDTVRHWLK NASIPVMEMGAMRADPIDMNIGIDNVAAMYELTEMVIQRGYQNIGLLCANQEQWIFQQHL QGWYKAMLRHHLSPNRVINAAMTPSFSTGAAQLPEFLLAWPELDALVCVSDELACGALYE CQRRRIKVPDDLAVVGFGDSDVSRVCQPPLTTMAVPHRKIGIEAGKALLERLNDGDWRDH KPIASSLCLRESC >gi|333596725|gb|GL892087.1| GENE 911 1021615 - 1022181 641 188 aa, chain - ## HITS:1 COG:STM2346 KEGG:ns NR:ns ## COG: STM2346 COG0494 # Protein_GI_number: 16765673 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 184 1 184 184 300 88.0 1e-81 MVEQNHLASTEWVDIVSEENEVIAQASREQMRAERLRHRATYIVVHDGMGKILVQRRTDT KDFLPGMLDATAGGVVQADEVLLDSARREAEEELGIAGVPFAEHGQFYFEDEHCRVWGGL FSCVSHGPFALQEEEVSEVCWMTPEEITARCDEFTPDSLKALALWMTRNAKNESAKPENK AEKEEEAE >gi|333596725|gb|GL892087.1| GENE 912 1022237 - 1022788 733 183 aa, chain - ## HITS:1 COG:ECs3184 KEGG:ns NR:ns ## COG: ECs3184 COG0622 # Protein_GI_number: 15832438 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 318 83.0 5e-87 MKLMFASDIHGSLPATERVLSLFAQSGAQWLVILGDVLNHGPRNALPEGYAPAQVAEKLN PFASRIIAVRGNCDSEVDQMLLHFPLTAPWQQVLMENSRLFLTHGHLFGPDNLPSLAAGD VLVYGHTHIPVAEKRGAFYHFNPGSVSIPKGGNPASYGMYEDGTLSVIALNDQQVIAQIA INP >gi|333596725|gb|GL892087.1| GENE 913 1022845 - 1023525 655 226 aa, chain - ## HITS:1 COG:ECs3185 KEGG:ns NR:ns ## COG: ECs3185 COG0625 # Protein_GI_number: 15832439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 13 226 1 214 214 328 75.0 5e-90 MLSENRSADEDVMSQPVITLWSDANFFSPYVMSVYVALAEKGLAFSLKTVDLDSGEHLKP QWQGYALTRRVPVLEIDGFELSESSAIDEYLEDRFAPPEWERIYPHDLQKRARARQIQAW LRSDLVPIRTERSTDVVFAGVKKPALSEEGLSSARKLIDTASSLLAQGNPNLFGEWCIAD TDLALMLNRLILNGDAVPQLLVDYATFQWQRASVQRYLALSAKRAG >gi|333596725|gb|GL892087.1| GENE 914 1023630 - 1024259 728 209 aa, chain + ## HITS:1 COG:STM2349 KEGG:ns NR:ns ## COG: STM2349 COG0625 # Protein_GI_number: 16765676 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 203 1 203 215 360 83.0 1e-99 MIDLYYAPTPNGHKITLFLEEAEVDYRIIRVDISKGDQFRPVFLAISPNNKIPAIIDNLP SDGGKPLSLFESGEILLYLAEKTGKLLSGELRERHHTLQWLFWQSSGLGPMLGQNHHFTA YAPQTIPYAIERYQVETQRLYGVLNRRLEKSPWLGGEHYSIADIACWPWINTHERHRIDL ASYPAVNNWFERIRTRPATERAMQKIHQI >gi|333596725|gb|GL892087.1| GENE 915 1024335 - 1024703 375 122 aa, chain + ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 1 120 1 120 120 194 90.0 4e-50 MSQHDAVIRIKNLRLRTFIGIKEEEIANRQDIVVNVVIHYPADKARASEDINDALNYRTI TKSIIQYVENNRFALLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR QA >gi|333596725|gb|GL892087.1| GENE 916 1024717 - 1025610 989 297 aa, chain + ## HITS:1 COG:yfcH KEGG:ns NR:ns ## COG: yfcH COG1090 # Protein_GI_number: 16130239 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Escherichia coli K12 # 1 297 1 297 297 526 84.0 1e-149 MKILLTGGTGLIGRHLIPRLQALHHDITVVTRSPEKARQVLGAGVEIWKGLAERQDLNGF DAVINLAGEPIADKRWTEEQKQRLCNSRWNMTEKLVELIRNSETPPSVLISGSATGYYGD LGEVVVTEEEPPHNEFTHKLCAQWERIACAAQSNRTRVCLLRTGVVLAPKGGILGKMLPP FKMGLGGPIGNGRQYLAWIHIDDMVNGILWLLDNDLRGPFNMVSPYPVRNEQFAHALGHA LHRPAVLRVPATAIRLLMGESSVLVLGGQRALPKRLEAAGFTFRWYDLEEALGDVVQ >gi|333596725|gb|GL892087.1| GENE 917 1025655 - 1026164 178 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227984558|ref|ZP_04031803.1| acetyltransferase, ribosomal protein N-acetylase [Thermomonospora curvata DSM 43183] # 3 154 7 163 188 73 36 4e-11 MATITTPRLHLTPFEPSDWAFFRSLREDPTIMRYMAAITPEKETRRVFAARLMAEHVFVI RFRDDNTPLGDIGLQISPANREEADIGYTVVPAAQGKGIASEALRAVCDYAFNQAGVKAI NAWVLADNSGSVRVLEKAGFVRTQVLEKAYEINGVRYDDWGYRLECGAV >gi|333596725|gb|GL892087.1| GENE 918 1026213 - 1026986 261 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 105 34 1e-20 MAENKLNVIDLHKRYGEHEVLKGVSLEANAGDVISIIGSSGSGKSTFLRCINFLEKPSEG SIVVSGQNINMVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLSKQEARERAVKYLAKVGIDERQQIKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQKLAEEGKTMVVVTHEMGFARNVSNHVIFLHQGKIEEQGHPDEVL ANPQSPRLQQFLKGSLK >gi|333596725|gb|GL892087.1| GENE 919 1026996 - 1027709 773 237 aa, chain - ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 236 1 236 238 409 92.0 1e-114 MIEIIQEYWKSLLWTDGYRFTGVAITLWLLISSVVMGGILAVFLAIGRVSNNKFIQFPIW LFTYVFRGTPLYVQLLVFYSGMYTLEIVKGTEMLNAFFRSGLNCTVLALTLNTCAYTTEI FAGAIRSVPHGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTA TVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKRWLQHIKPSTH >gi|333596725|gb|GL892087.1| GENE 920 1027706 - 1028392 890 228 aa, chain - ## HITS:1 COG:STM2353 KEGG:ns NR:ns ## COG: STM2353 COG4215 # Protein_GI_number: 16765680 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 228 1 228 228 374 92.0 1e-103 MLYGFSGVILQGALVTLELAISSVVLAVLIGLAGAGAKLSANRPLALIFEGYTTLIRGVP DLVLMLLIFYGLQIALNGVTDAIGMDQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVP KGHIEAATAYGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKAT QLAGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLLLERRYSVGVKRADL >gi|333596725|gb|GL892087.1| GENE 921 1028481 - 1029263 1076 260 aa, chain - ## HITS:1 COG:ECs3193 KEGG:ns NR:ns ## COG: ECs3193 COG0834 # Protein_GI_number: 15832447 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 24 260 24 260 260 440 93.0 1e-123 MKKLVLSLSLVLAFSSATAAFAAIPQKIRIGTDPTYAPFESKNAKGELVGFDIDLANELC KRIKAQCTYVENPLDALIPSLKAKKIDVIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK SSDIQPTLESLKGKRVGVLQGTTQETYGNEHWAPKGIEIVSYQGQENIYADLTAGRIDAA FQDEVAASEGFLKQPVGKDYKFGGPSIKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR ADGTYDKLAKKYFDFNVYGG >gi|333596725|gb|GL892087.1| GENE 922 1029489 - 1030271 1041 260 aa, chain - ## HITS:1 COG:STM2355 KEGG:ns NR:ns ## COG: STM2355 COG0834 # Protein_GI_number: 16765682 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 444 90.0 1e-125 MKKTVLALSLLVGLSAAAGSYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMC KRMEVKCTWVGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSEKLYAADSRLIAAK GSPIQPTIDSLKGKHVGVLQGSTQEGYANANWREKGVDVVAYQNQDLIYSDLAAGRLDAA FQDEVAASEGFLKQPAGKEYAFAGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFNELR KDGTYDKLAKKYFDFNVYGD >gi|333596725|gb|GL892087.1| GENE 923 1030562 - 1031131 785 189 aa, chain - ## HITS:1 COG:ECs3195 KEGG:ns NR:ns ## COG: ECs3195 COG0163 # Protein_GI_number: 15832449 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 189 1 189 189 327 91.0 8e-90 MKRLIVGISGASGAIYGVRLLQVLRNVPGVETHLVMSQAARQTLSLETDLSLRDVQALAD VVHDARDIAASISSGSFKTAGMVILPCSIKTLSGIVNSYTDTLVTRAADVVLKERRPLVL CVRETPLHLGHLRLMTQAAELGAVIMPPVPAFYHRPQSLDDVLNQTVNRVLDQFDIDLPE DLFTRWQGA >gi|333596725|gb|GL892087.1| GENE 924 1031221 - 1032738 1802 505 aa, chain - ## HITS:1 COG:STM2362 KEGG:ns NR:ns ## COG: STM2362 COG0034 # Protein_GI_number: 16765689 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Salmonella typhimurium LT2 # 1 505 1 505 505 1004 96.0 0 MCGIVGIAGFMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVNDVFEARH MQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR RHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAVAATNRLIRGAYACVAMIIGHGMV AFRDPNGIRPLVLGKRDLGDGRSEYMVASESVALDTLGFEFLRDVAPGEAVYITEKGQLF TRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWDDLDIDVVI PIPETSCDIALEIARILDKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPTANELIAHG REVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGIYVTKDVDQQYLDYLD SLRNDDAKAVQLQNDLESLEMHNEG >gi|333596725|gb|GL892087.1| GENE 925 1032772 - 1033260 461 162 aa, chain - ## HITS:1 COG:STM2363 KEGG:ns NR:ns ## COG: STM2363 COG1286 # Protein_GI_number: 16765690 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Salmonella typhimurium LT2 # 1 161 1 161 162 268 96.0 2e-72 MVWIDYAIIAVIGFSCLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELV RNGIAIAVLFIATLIVGAIVNYVIGQLVEKTGLSGTDRVLGICFGALRGVLIVAAILFFL DTFTGFSKSEDWQKSQLIPEFSFIIRWFFDYLQSSSSFLPRA >gi|333596725|gb|GL892087.1| GENE 926 1033517 - 1034164 494 215 aa, chain - ## HITS:1 COG:STM2364 KEGG:ns NR:ns ## COG: STM2364 COG3147 # Protein_GI_number: 16765691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 215 14 224 224 244 77.0 9e-65 MLVALGVIILPGLLDGQKKHYQDEFAAIPLVPKPGDREEPDMLPAATQALPAQPPEGAAE EVRAGDAAAPSLDPSRLATNNNIEIDPVPVEQPKPVEKPKPVEKPQPKPQRDKAAEQLAA ASETPPPAKQDAAPTGKAYVVQLGALKNADKVNEIVSKLRGAGYRVYTSPTTPVQGKITR ILVGPDASKDKLKGSLGELKQISGLSGVVMNYSAN >gi|333596725|gb|GL892087.1| GENE 927 1034193 - 1035374 1221 393 aa, chain - ## HITS:1 COG:ECs3199 KEGG:ns NR:ns ## COG: ECs3199 COG0285 # Protein_GI_number: 15832453 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Escherichia coli O157:H7 # 1 393 30 422 422 641 83.0 0 MGLERVSQVAARLDVLKPAPFVFTVAGTNGKGTTCRTLESVLMAAGYKVGVYSSPHLVRY TERVRVQNTELAESAHTASFAAIEAARGETSLTYFEYGTLSALWLFKQAQLDVVILEVGL GGRLDATNMVDADVAVVTSIALDHTDWLGPDRESIGREKAGIFRANKPAVVGEPDMPHTI ADVANEKGAHLLRRGEDWQYEVQDNGWRFSDAHGVLDNLPLPQVPQPNAATALAALRTSG LAVSEQAIRDGIQNALLPGRFQIVSESPRLILDVAHNPHAAAYLAGRLKSLPKTGRVLAV IGMLHDKDIGGTLACMESVVDSWYCAPLEGPRGATAEQLMEHLGKGEIYSSVVSAWRAAM AEAKPEDTVLVCGSFHTVAHVMEVMDAGRTGGE >gi|333596725|gb|GL892087.1| GENE 928 1035532 - 1036437 1221 301 aa, chain - ## HITS:1 COG:STM2366 KEGG:ns NR:ns ## COG: STM2366 COG0777 # Protein_GI_number: 16765693 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Salmonella typhimurium LT2 # 1 301 1 304 304 565 97.0 1e-161 MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMSARNR LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALIVMKGTLHEMPV VAAAFEFSFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKT SAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPDEPREGVVVPDQEPE A >gi|333596725|gb|GL892087.1| GENE 929 1036592 - 1037251 828 219 aa, chain - ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 356 85.0 2e-98 MDVIRFLIDFILHIDVHLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LSALPTNDLNVHLMVVLMIIAAIIGDAVNYTIGRVFGERLFSNPDSKIFRRSYLDKTHAF YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAMYNVVGALLWVLLFTYAGYLFGD LPVVQENLKLLIVAIIVLSVLPGVIEIIRHKRAAAKQAK >gi|333596725|gb|GL892087.1| GENE 930 1037280 - 1038092 773 270 aa, chain - ## HITS:1 COG:truA KEGG:ns NR:ns ## COG: truA COG0101 # Protein_GI_number: 16130253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli K12 # 1 270 1 270 270 521 92.0 1e-148 MSDVEQKPVHRIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPISVFCAGRTD AGVHGTGQVVHFDTTAVRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY VIYNQRLRPAVLSQGVTHFYEPLDAERMQRAAQCLIGENDFTSFRAVQCQSRTPWRNVMH INVSRYGAYVVVDIKANAFVHHMVRNIVGSLMEVGAGHQPESWIAELLAAKDRTLAAATA KAEGLYLVSVDYPDRFDLPKPPMGPLFLAD >gi|333596725|gb|GL892087.1| GENE 931 1038092 - 1039105 1352 337 aa, chain - ## HITS:1 COG:usg KEGG:ns NR:ns ## COG: usg COG0136 # Protein_GI_number: 16130254 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 337 1 337 337 590 89.0 1e-168 MSEGWNIAILGATGAVGEALLETLAERQFPVGEIYALARTDSAGEHLRFGGKSVMVQDAA AFDWTQAQLAFFAAGAEATASYIEEATNSGCLVIDLSGLFSLEPDVPLVVPDVNPFVLAD YRNRNVIAVPNSLTSQLLTALKPLIDDGGLSRISVTSLLSASANGKKAVDALAGQSAKLL NGVPIDEDDFFGRQLAFNMLPLLPDREGSVREERRIVDEARKILQDDGLMISASVVQSPV FYGHAQMVGFEALRPLAAEEARDAFGRGEDIVLSEESEFPTQVGDATGSAHLSVGCVRND YGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY >gi|333596725|gb|GL892087.1| GENE 932 1039173 - 1040285 1185 370 aa, chain - ## HITS:1 COG:STM2370 KEGG:ns NR:ns ## COG: STM2370 COG0111 # Protein_GI_number: 16765697 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 370 9 378 378 643 85.0 0 MPYARELFSRLGEVKAVPGRPIPVSELDDADALMVRSVTKVNEALLSGKGVKFVGTATAG TDHVDDQWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFALKDRTVGIVGVGNVG GRLQKRLEAWGIRTLLCDPPRKDNGDEGDFRALDELVDECDVITFHTPLFKEGPYKTLHL ADEKRIRRLKAGTILINACRGPVVDNAALLKCLDAGQDLSVVLDVWEPEPDLNVALLNKV DVGTAHIAGYTLEGKARGTTQVFEAYSAFIGHPQQVALDTLLPAPEFGRITLHGPLDQAT LKRLVHLVYDVRRDDALLRKVAGIPGEFDKLRKHYVERREWSSLYVMCDDAAAATLLKAL GFNAVHHPAH >gi|333596725|gb|GL892087.1| GENE 933 1040421 - 1041425 1069 334 aa, chain + ## HITS:1 COG:no KEGG:ECL_03670 NR:ns ## KEGG: ECL_03670 # Name: not_defined # Def: flagella biosynthesis regulator # Organism: E.cloacae # Pathway: not_defined # 1 334 1 334 334 481 89.0 1e-134 MQPISGTPPRPPGEGPVTPNTPGEQPLSTQQRTVLERLITRLIALTSQQNAEVWAGVKHD LGVRNDAPLQSRHFPAAEQNLNQRLASAQQQHTTRQIISQLTELLGQGNNRQAVSDFIRQ QYGHTALSQLSPEQLKTVLTLLQSNQLSIPQPQQRPSTERPLQPAEHNTLKQMVTKLAAA TGEPTKLIWQSMLELSGVKAGEMIPAKQFTHLVTWLQARQTLSTQSAPTLHSVQAALKQP LEPHEFDMIRDYAQQNWQATPQTVLTTAQVQDVLNQIFVRRAEREGGVPEVRNIQPIYNP LFAPVVDTFKTLSARPGLMFIALVIALAIFWLVA >gi|333596725|gb|GL892087.1| GENE 934 1041513 - 1042691 1612 392 aa, chain - ## HITS:1 COG:STM2372 KEGG:ns NR:ns ## COG: STM2372 COG0477 # Protein_GI_number: 16765699 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 391 1 391 392 535 85.0 1e-152 MKAATPEKIAPSGNLSLFRIAFAVFLTYMTVGLPLPVIPLFVHQELGYGNTMVGIAVGIQ FLATVLTRGYAGRLADQHGAKRSALQGMFACGLAGGAWLLAALLPIEAAYKFALLVAGRL ILGFGESQLLTGTLTWGMGLVGPARSGKVMSWNGMAIYGALAAGAPLGLLIHSQFGFAAL AGTTMVLPLLAWAFNGSVRKVPAHKGERPSLWSVVGQIWQPGLGLALQGVGFAVIGTFVS LYFMSRGWAMAGFTLTAFGGAFVLMRALFGWMPDRFGGVKVAVASLVIETVGLVLLWQAP SASVALLGAALTGCGCSLIFPALGVEVVKRVAPQVRGTALGGYAAFQDISYGVTGPLAGL LATSFGYPSVFLAGAVSAVVGIVVTLVAFRKR >gi|333596725|gb|GL892087.1| GENE 935 1042759 - 1043976 1503 405 aa, chain - ## HITS:1 COG:fabB KEGG:ns NR:ns ## COG: fabB COG0304 # Protein_GI_number: 16130258 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli K12 # 1 404 1 405 406 712 93.0 0 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSEEFKDSGMRSHVWGNVKLDTTGLI DRKVVRFMNDASIYAYLSMQEAIKDSGLSEDVYQNNPRVGLIAGSGGSSKAQVFGADAMR SPRGLKAVGPYVVTKAMGSAVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGK QDIVFAGGGEELGWEMACEFDAMGALSTKYNETPDKASRTYDAHRDGFVIAGGGGMVVVE ELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGTS TPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLENGFIAPSINI DEMDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKLKA >gi|333596725|gb|GL892087.1| GENE 936 1044135 - 1046132 1407 665 aa, chain + ## HITS:1 COG:Z3587_2 KEGG:ns NR:ns ## COG: Z3587_2 COG0665 # Protein_GI_number: 15802871 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 EDL933 # 256 665 1 411 413 608 73.0 1e-174 MKQNAIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLEGNHLSTRFPVHPRSLF VVAESGFGTGLNFLTLWQAFDQFRAAHPEATLQRLHFISFEKFPLTAHDLRRAHQRWPEL AHWAEQLQAQWPSHIGGCHRLVLDDGRVTLDLWLGDINDLTDKLDDTMNQKVDAWFLDGF APAKNPDMWSPHLFSAMARLARPGATLATFTSAGFVRRGLQEAGFTMRKTKGFGRKRDML VGEMEQDLAIPAQASWFARRPSTSREVAIVGGGIASALLSLALLHRGWQVTLYCADEAPA TGASGNRQGALYPLLSSHDPALFQFFPAAFTFARRLYDSLPVKFDHDWCGVTQLGWDEKS QQKITQMLSLGLPEAIAHAVTAQQVAETTGVDTGCGGIQYPLGGWLCPAELTAAVMALAQ SRGLAVRYGHKVESLSRSERWELHFADGKAALHASVVLANGHNISQFMQTETLPVYPVGG QVSHIPAAPQLSKLRQVLCYDGYLTPQNPSNGHHCIGASYHRGETDMQYSEADQQQNRQR LIDCFPHAAWAKEVDVSEGQARCGVRCATRDHLPMAGNVPDYDATLEVYQDLADNKETAV SAPVYPELFMLGGLGSRGLCSAPLLAEVLAAQMSDEPIPLDRVTLAGLNPNRLWVRKLLK GKKVK >gi|333596725|gb|GL892087.1| GENE 937 1046187 - 1046462 420 91 aa, chain - ## HITS:1 COG:no KEGG:Entcl_1400 NR:ns ## KEGG: Entcl_1400 # Name: not_defined # Def: YfcL protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 90 1 90 92 144 91.0 1e-33 MIAEFESRILALIDDMVEHASDDELFASGYLRGHLTLAVAALEAGDDHSADAVHAEVTRS LENAIQAGELSPRDQSLVLGMWDNLFQQAKR >gi|333596725|gb|GL892087.1| GENE 938 1046476 - 1047021 493 181 aa, chain - ## HITS:1 COG:yfcM KEGG:ns NR:ns ## COG: yfcM COG3101 # Protein_GI_number: 16130261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 181 1 181 182 345 88.0 3e-95 MNSTHKYEQLIEIFDSCFAEDFNTRLIKGDDEPIYLPADDEVPYNRIIFAHGFYASGLHE ISHWCIAGKARRELVDFGYWYCPDGRDAATQGQFEDVEVKPQALEWLFCVAAGFPFNVSC DNLEGDFEPDRIVFQRRVHAQVMEYLEKGIPERPARLIGALQNYYHTPEITAECFPWPED L >gi|333596725|gb|GL892087.1| GENE 939 1047021 - 1047830 911 269 aa, chain - ## HITS:1 COG:STM2382 KEGG:ns NR:ns ## COG: STM2382 COG0730 # Protein_GI_number: 16765709 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 269 1 269 269 432 91.0 1e-121 MDNFVDLFMVSPLLLAVLFFVAMLAGFIDALAGGGGLLTVPALLAAGMSPAQALATNKLQ ACGGSLSSSLYFIRRKVVNLADQKLNILMTFIGSTAGALLVQHVQSDILRQILPLLVICI GLYFLLMPKLGEEDRQRRLHGLPFALIAGGCVGFYDGFFGPGAGSFYALAFVTLAGFNLA KSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMMAGQFLGARAGSRLVLSKGQKLIRP MIVVVSAVMSAKLLYDSHGQEILTWLGMN >gi|333596725|gb|GL892087.1| GENE 940 1047830 - 1048654 545 274 aa, chain - ## HITS:1 COG:STM2383 KEGG:ns NR:ns ## COG: STM2383 COG3770 # Protein_GI_number: 16765710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Salmonella typhimurium LT2 # 1 274 1 274 274 480 86.0 1e-135 MKKTAIALLALLASGASQAATPWQKITHPVAGSAQSIGAFSNGCIVGAQALPLQSDRYQV MRTDQRRYFGHPDLLLFIQRLGNQVHNLGLGTMLIGDMGMPAGGRFNGGHASHQTGLDVD IFLQLPKTRWSSAQLLKPQALDLVSADGKRVVASRWSPEISSMIKLAAEDNDVTRIFVNP AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPANSLECEDQPLPPPGDGCGYELQ SWFEPAKPGTSKPEKKTPPPLPPSCQALLDEHVL >gi|333596725|gb|GL892087.1| GENE 941 1048657 - 1049742 1317 361 aa, chain - ## HITS:1 COG:ECs3213 KEGG:ns NR:ns ## COG: ECs3213 COG0082 # Protein_GI_number: 15832467 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 639 92.0 0 MAGNSIGQVFRVTTFGESHGLALGCIVDGVPPGIELTEADLQHDLDRRRPGTSRYTTQRR EPDQVKILSGVFEGRTTGTSIGLLIENTDQRSQDYGAIKDVFRPGHADYTYEQKYGFRDY RGGGRSSARETAMRVAAGAIAKKYLQQKCGIVIRGCLTQMGDIPLAIKDWDQVELNPFFC ADADKLDALDELMRGLKKEGDSIGAKVTVVADGVPAGWGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKAGFQSNHAGGILGGISSGQQIIANIALKPTSSITV PGHTINRAGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHFLRQRAQNADVTTTLPR W >gi|333596725|gb|GL892087.1| GENE 942 1049803 - 1050735 1528 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase [Escherichia coli B7A] # 1 310 1 310 310 593 93 1e-167 MDKIFVDEAVNELHTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIP EDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGEL INNHFEGLINHQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVAEHNIEEHG LIHHVTPIRSDLFRDLPTLQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGSDGLKL TRRILACAPDYLTDDGVLICEVGNSMVHLIEQYPDVPFTWLEFDNGGDGVFMLTKAQLLD AREYFSIYKD >gi|333596725|gb|GL892087.1| GENE 943 1050881 - 1051432 542 183 aa, chain + ## HITS:1 COG:STM2386 KEGG:ns NR:ns ## COG: STM2386 COG2840 # Protein_GI_number: 16765713 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 326 90.0 2e-89 MKKKTSLSEEDQALFRQLMTGTRQITHDTIVHRPQRKKVSEVPVKRLLQEQVDNSHYFSD EFQPLLNTQGAVKYVREDVSHFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACR REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWQPP ELP >gi|333596725|gb|GL892087.1| GENE 944 1051480 - 1051950 427 156 aa, chain - ## HITS:1 COG:STM2387 KEGG:ns NR:ns ## COG: STM2387 COG2062 # Protein_GI_number: 16765714 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Salmonella typhimurium LT2 # 1 156 6 161 161 285 91.0 3e-77 MRHGDAALDAASDSVRPLTVCGCDESRQMATWLKGQKVDIERVLVSPFLRAEQTLDVVGE CMNLPSSVDVLPELTPCGDVGLVSAYLQALCNEGVASALVISHLPLVGYLVSELCPGETP PMFTTSAIANVTLDETGKGVFNWQMSPCNLKMAKAI >gi|333596725|gb|GL892087.1| GENE 945 1052175 - 1054322 1862 715 aa, chain - ## HITS:1 COG:STM2388_2 KEGG:ns NR:ns ## COG: STM2388_2 COG1250 # Protein_GI_number: 16765715 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Salmonella typhimurium LT2 # 324 712 17 405 408 654 80.0 0 METTSAFNLAVRLDNVAVITIDVPDEKMNTLKAEFGVQVRAMLRQIRENKAICGLVFISG KPDNFIAGADINMIARATSAQEAEDLARQGQQVMAEIHALSIPVVAAIHGACLGGGLELA LACHSRICTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRARQAL KAGLVDEVVPHTILLEAAVERALKGRQAKRPLPVRERILAGPLGRALLFNRVGKKTGQKT KGNYPATTRILEVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPG SEAEPAPLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDINPKGINHALQYSWQNLDRKV KRRHIKASERDKTLAMITGTTDYSGFAHRDLVIEAVFEDLALKQQMVADVEQHCAPHTIF ASNTSSLPIGDIAAKAARPEQVIGLHYFSPVEKMPLVEVIPHATTSPQTIATVVKLAKKQ GKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDEALVKFGFPVGPIQLLDEVG IDTGTKIIPVLEAAYGDRFAPPANVVSAILKDDRKGRKNERGFYLYAAKGRKSKKQIDPS VYALIPVTGQGKLSAVQCAERCVMMMLNEAARCFGEQVIKSARDGDIGAVFGIGFPPFLG GPFRYMDTLGAGEVVAILQRLASQYGPRFTPCDELLQMAERAQTFWPARETDCVN >gi|333596725|gb|GL892087.1| GENE 946 1054322 - 1055632 1388 436 aa, chain - ## HITS:1 COG:yfcY KEGG:ns NR:ns ## COG: yfcY COG0183 # Protein_GI_number: 16130275 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 436 1 436 436 740 91.0 0 MSQALPLITRHGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGEMLARSEIPPEVIE QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRA GIAGGADSSSVLPIGVSKQLARILVDANKARTTGAKLKLFSRLRLRDLMPVPPAVAEYST GLRMGDTAEQMAKTYGITREQQDALAHRSHQLAAKAWSEGKLTDEVMTAYVPPYREPLSE DNNIRGTSTLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGITPLGY LRSYAFTAIDVWQDMLLGPAWSTPLALDRAGLTLSDLTLIDMHEAFAAQTLANVQLMASE RFARDVLGRAHATGEVDQSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT ACAAGGLGAAMVLEAE >gi|333596725|gb|GL892087.1| GENE 947 1055871 - 1056155 413 94 aa, chain - ## HITS:1 COG:ECs3226 KEGG:ns NR:ns ## COG: ECs3226 COG3691 # Protein_GI_number: 15832480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 94 9 102 102 139 81.0 9e-34 MSKCSADETPVCCCMDVGTIMDNTDCTASYSRVFPNRAEAEETLAALSQRAREVESDPCE IKSTFTEVDGGVQLDIDFVFACEAETLIFQLGLR >gi|333596725|gb|GL892087.1| GENE 948 1056528 - 1057811 1508 427 aa, chain + ## HITS:1 COG:STM2391 KEGG:ns NR:ns ## COG: STM2391 COG2067 # Protein_GI_number: 16765718 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Salmonella typhimurium LT2 # 1 427 3 437 437 606 74.0 1e-173 MSQKTLFKQTALAVAVAIVSTSAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNASRNPA LIMMFDRPTFSAGAVYIDPDVNISGKSQFTGADLKADNIAPTAWVPNLHFVAPINEQFGW GASVTSNYGLATEFNNNYPAGEYGGKTDLTTLNLNLSGAYRLNDNWSFGLGFDAVYADAK IERYSGEQTAALPKNSNKIASLKGDEWGYGWNAGILYELDKNNRWGLTYRSEVKIDFDGD YKSGILSPVNGMVPGAGTTIPWGTSNQTVPGSLSLHLPEMWEVSGYNRVAPQWAIHYSLA YTSWSQFEELKATGTNGQTLFYKDESFHDAYRIALGTTYYMDDNWTFRTGVAFDDSPVPA DKRSISIPDQDRFWVSAGATYAFNENASIDAGVSYMHGQKVTFQEGPYEFTSEGKAWLFG TNFNYAF >gi|333596725|gb|GL892087.1| GENE 949 1057856 - 1058608 1018 250 aa, chain - ## HITS:1 COG:STM2392 KEGG:ns NR:ns ## COG: STM2392 COG2853 # Protein_GI_number: 16765719 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Salmonella typhimurium LT2 # 1 250 1 251 251 472 88.0 1e-133 MKLRLSALALGVTMLVGCASSGEQTGRSDPLEGFNRSMYSFNYNVLDPYLVRPVAVAWRD YVPQPARNGLSNFTSNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNSLLGMGGLIDVAGMA NPKLQREQPHRFGSTLGHYGVGYGPYVHLPFYGSFTVRDDGGDMVDTLYPVLSWLTWPLS IGKWTVEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQNHDFIANGGKLKPEDNPNAKAI ENELKDIDSE >gi|333596725|gb|GL892087.1| GENE 950 1058923 - 1059852 902 309 aa, chain + ## HITS:1 COG:STM2393 KEGG:ns NR:ns ## COG: STM2393 COG2116 # Protein_GI_number: 16765720 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Salmonella typhimurium LT2 # 1 307 1 311 313 525 84.0 1e-149 MKDISEEKIGESKEEHEIESEEKDRGEEIEVDEDRLPSRAMAIHEHIRQDGEKEMERDAM ALLWSAIAAGLSMGASLLAKGIFHVQLEGVPGGFLLENLGYTFGFIIVIMARQQLFTENT VTAVLPVMQNPTLGNFGLLMRLWSVVLLGNLIGTGIAAWAFEYMPIFDEPTRDAFVKIGM DVMKNTPVEMFSNAIISGWIIATMVWMFPSAGSAKIVVIILMTWLIALADTTHIVVGTVE ILYLVFNGTLHWSDFFWPFALPTLAGNICGGTFIFALLSHAQIRNDMSNKRKAELKAQEK KDKTAEKSA >gi|333596725|gb|GL892087.1| GENE 951 1060355 - 1061272 722 305 aa, chain + ## HITS:1 COG:STM2401 KEGG:ns NR:ns ## COG: STM2401 COG1560 # Protein_GI_number: 16765727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Salmonella typhimurium LT2 # 3 305 4 306 306 531 83.0 1e-151 MSQSKFQRAFLHPRYWFTWFGLGVLWLLVQLPYPVIRFLGSKLGSASRHFLKRRESIARK NLELCFPHYNAQQRETLIAENFKSIGMALLETGMAWFWPDERVRKWFDVEGLDNLKRAQL QKRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNSALMEWVQTRGRMRSNKAMISRNN LRGMVGALKKGEAVWFAPDQDYGPKGSSFAPFFAVKDVATTNGTFVISRLSGAAMLTVTM VRKADKSGYRLHISPEMANYPEDESEAATFINKVIEFEIMRAPEQYLWMHRRFKTRPLGE ASLYI >gi|333596725|gb|GL892087.1| GENE 952 1061762 - 1062997 1270 411 aa, chain - ## HITS:1 COG:yfdZ KEGG:ns NR:ns ## COG: yfdZ COG0436 # Protein_GI_number: 16130311 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 404 1 404 412 798 96.0 0 MAEFSPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCT VAQRPDTHGYSTSRGIPRLRRAISRWYQDRYQVDIDPESEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF TLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVLDIA AQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLQDAKVCVSP GIGFGDYGDTHVRFALIENSDRIRQAVRGIKSMFRADGLLAGKSVAEQPES >gi|333596725|gb|GL892087.1| GENE 953 1063402 - 1065081 1950 559 aa, chain + ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 558 7 564 565 1043 92.0 0 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTFIFSMFALFSTWSGVPV EGSLVNVRIIAVMSGGILFGPWVGIITGIIAGTHRYLIDIGGVTAVPCFITSIIAGLLSG WINRKIPKKQHWRAGIIAGMICETLTMILVIVWAPTIALGLDIVSKIGIPMILGSVCIGF IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNAESLRQVCDIIRRDIHADAVAI TNIDHVLAYVGVGEHNYRDSDDTISPTTRQAINYGKIIIKNNDEAHRTPEIHSMLVIPLW EKGVVTGTLKIYYCHAHQITSTLQEMAIGLSQIISTQLEVSRAEQLREMANKAELRALQS KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY IAIEQARFGDKLTVIYDIDEEVNCVIPSLLIQPLVENAIVHGIQPCKGKGVVTISVTESG NRVRIAVRDTGHGIDPKVIERVKSNEMPGNKIGLLNVHHRVKLLYGDGLHIHRLEPGTEI AFYVPNERTPVNAPLPLLP >gi|333596725|gb|GL892087.1| GENE 954 1065095 - 1065826 723 243 aa, chain + ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 243 1 244 244 433 89.0 1e-121 MKVIIVEDEILAQQELSWLIKTHSQMEIVGCFEDGLDVLKFLQHNRVDAIFLDINIPSLD GVLLAQNINQFAHKPFIVFVTAWKEHAVEAFELEAFDYILKPYQESRIISMLHKLETAWQ QQTLPASASPVARENDTINLVKDERIIVTPVDDIYYAEAHEKMTFVYTRRESYVMAMNIT EFCNKLPAAHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFQVPVSRSRVKEFRQL MHL >gi|333596725|gb|GL892087.1| GENE 955 1065862 - 1066827 1167 321 aa, chain - ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 615 91.0 1e-176 MTKYALVGDVGGTNARLALCDVNSGEISQAKTYSGLDYPSLEAVVRVYLEEHKVSVEDGC IAIACPITGDWVAMTNHTWAFSIAEMQKNLGFSHLEIINDFTAVSMAIPMLKPEHLIQFG GTAPVEGKPIAVYGAGTGLGVAHLVHVDRRWVSLPGEGGHVDFAPNSEEEGIILEELRAE IGHVSAERVLSGPGLVNLYRAIVKSDGRLPENLQPKDVTERALADSCIDCRRALSLFCVI MGRFGGNLALNLGTFGGVYIAGGIVPRFLDFFTASGFRGGFEDKGRFKSYVQDIPVYLIV HDNPGLLGSGAHLRQVLGQIL >gi|333596725|gb|GL892087.1| GENE 956 1067033 - 1068268 1367 411 aa, chain + ## HITS:1 COG:STM2404 KEGG:ns NR:ns ## COG: STM2404 COG0038 # Protein_GI_number: 16765730 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 1 410 1 410 411 510 79.0 1e-144 MLHPRARTMLLLAVPALIIGVASSLVLIVVMKVAAVLQTILWTALPVKLGISIDSPGWIM MMLTLTGIVVGLVIRYSPGHAGPDPALEPLIGAPVSPSALPGLIIALIVGLAGGVSLGPE HPIMAVNIALAVFLGGRLFPRVGALDWTILASAGTIGALFGTPVAAALIFSQTLSSDHEV PLWDKLFAPLMAAAAGALTTSLFFHPHFSLPIPHYGQMHLTDIFSGAVVVAIAIALGMVA VWCLPRLHRLMHRLKHPVLILGMGGFILGVLGAIGGTVTLFKGLDEMQQLAFSQVFSVSD YLLFALVKLAALVVASACGFRGGRIFPAVFVGVALGLMLHEHVDAVPAAITVSCSILGLV LVVTRDAWLSLFMAAVVVPDTTLLPLLCIVMLPAWLLLAGKPMLMGWRNDR >gi|333596725|gb|GL892087.1| GENE 957 1068269 - 1069927 1604 552 aa, chain - ## HITS:1 COG:STM2405 KEGG:ns NR:ns ## COG: STM2405 COG3961 # Protein_GI_number: 16765731 # Func_class: G Carbohydrate transport and metabolism; H Coenzyme transport and metabolism; R General function prediction only # Function: Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes # Organism: Salmonella typhimurium LT2 # 1 550 1 548 550 736 66.0 0 MRTPYCVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAAD GYARCKGFAALLTTFGVGELSAMNGVAGSFAEHVPVLHIVGAPGMAAQQRGELLHHTLGD GEFRHFYHMSEPITVAQAVLTEQNACYEIDRVLTTMLRERRPGYLMLPADVAKKAATPPV SALTLHPAPADSACLQAFREAAEKRLSMSKRTALLADFLVLRHGLRAALQTWVKEVPMAH ATMLMGKGIFDERQRGFYGTYSGSASAAPVKEAIEGADTVLCIGTRFTDTLTAGFTHQLT PAQTIEVQPHASRVGDVWFTGIPMREAIETLTALCKTHVRDTRAPSDHSGFAFPTIEGAL TQESFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGA QTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQRPIILVLNNEGYTVERAIHGPEQRYND IALWNWTQIPQALSLAPQAECWRVSEAEALAEVLDKVAHHERLSLIEVMLPKADIPPLLS ALTKALEARNNA >gi|333596725|gb|GL892087.1| GENE 958 1070114 - 1071112 871 332 aa, chain + ## HITS:1 COG:STM2406 KEGG:ns NR:ns ## COG: STM2406 COG0667 # Protein_GI_number: 16765732 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Salmonella typhimurium LT2 # 1 328 1 328 332 578 83.0 1e-165 MGYQPDKNRYQTMQYRRCGQSGLKLPAISLGLWHNFGDATLLENSRQLLQRAFDLGITHF DLANNYGPPPGSAERNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLISSL DQSLRRMGLEYVDIFYHHRPDPETPLRETMKALDHVVRQGKALYIGLSNYPAEVARRAIE ILEDLGTPCLIHQPKYSMFERAPEEGLLDVLQQKGVGCIPFSPLAGGQLTDRYLNGIPAD SRAASGSKFLNPEQITDKKLEKVRKLNALAEKRGQKLSQMALAWILRHDAVTSVLIGASK SGQIDDAAGMLENCRFSAEELKAIDAILSSSD >gi|333596725|gb|GL892087.1| GENE 959 1071239 - 1071586 236 115 aa, chain + ## HITS:1 COG:no KEGG:ECL_03730 NR:ns ## KEGG: ECL_03730 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 92 1 92 118 146 95.0 3e-34 MFRSLILAAVLLASAPLVANAGEITLLPSIKLQIGDRDDYGRYWDGGYWRDRDYWHRHYE WRGDRWRRHDNGLHRGWYKNNAYERGYREGWNDRDDRRGGWGHGKGRGGHGHGRH >gi|333596725|gb|GL892087.1| GENE 960 1071623 - 1072798 1387 391 aa, chain - ## HITS:1 COG:ECs3271 KEGG:ns NR:ns ## COG: ECs3271 COG1914 # Protein_GI_number: 15832525 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Escherichia coli O157:H7 # 1 390 22 411 412 614 92.0 1e-176 MGPAFIAAIGYIDPGNFATNIQAGASFGYKLLWVVVWANLMAMLIQMLSAKLGIATGKNL AEQIRDHYPRPAVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFL ILMLQRRGQKPLEKVIGGLLLFVAAAYIVELVFSQPNLVQLTKGMVIPSLPTSEAVFLAA GVLGATIMPHVIYLHSSLTQNLHGGTSKERYSASKWDVAIAMTIAGFVNLAMMATAAAAF HFNGHTGVADLDQAYLTLEPLLSHAAATIFGLSLVAAGLSSTVVGTLAGQVVMQGFVRFH IPLWVRRSVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSNKSLMGDLV NSTWVKRVGWAIVMVVVALNLWLLVGTVAGQ >gi|333596725|gb|GL892087.1| GENE 961 1073207 - 1074394 1570 395 aa, chain + ## HITS:1 COG:ECs3272 KEGG:ns NR:ns ## COG: ECs3272 COG1972 # Protein_GI_number: 15832526 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli O157:H7 # 1 395 1 400 400 618 95.0 1e-177 MDRVLHFVLALVVVTALALLVSTDRKKIRIRYVVQLLVIEVLLAWFFLNSNVGLGFVKGF SEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVVIRA IGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSRNRMYTMAATAMSTVSMS IVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLG EYILAGFKVAIIVAAMLIGFIALIAALNALFAAVLGISFQGILGYIFYPIAWVMGVPAHE ALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGILSVFLVSFANFSSIGIIAGAIKG LNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL >gi|333596725|gb|GL892087.1| GENE 962 1074440 - 1076593 1427 717 aa, chain - ## HITS:1 COG:yfeA_3 KEGG:ns NR:ns ## COG: yfeA_3 COG2200 # Protein_GI_number: 16130327 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 457 712 1 256 258 347 65.0 6e-95 MIALALSLIAIPFSRYISPRAIVSENDVYLAWLPLSAMLAIVLLFGRQAIIPLLLAFSVT NIYNLDLAPLQSVVLLCCQTFSVFAACGVMRLVLGKRWRHSIPNKYIGIRIFWLGFMVPV GIKLSMYLAGYLFDFPVTISSYFGEGSAIYNVIDIQSLICAALIFTMMFYYPLRMMINPR YARTFWRRSVKPLFCKKKALFIVVWLMLLVSMIAILCAPFESQFIAGYLMPIVFILFTLG IGRLSYALISLFWAASALMLLTYNYNFLNGVESGHSLSFILSVLISFAICLLYMSRIYQK SEWLKQGWQERALTDPLTGLPNIRALEVFLQHHPEAKVCCLRLDNLEFLSRHYGILMRVH CKKMITASLQPLLQKDEKLFQLPGSELVVVLLGPGTAERLQYMVDHLNSRKIIWNKTELD IEFGASWGEVPDGESLHHTLGQLSWLSEQSCAGHNVLALTNSLDDVSGQTTDRVLMLARI KRALDIGGLHLYAQPIHNARGEGYFEILSRLESDGEIITPDRFIPLIAQFNLSHRFDLNV VEKLLMWMRSHPSERAGTRFSVNLMPLTLMQNEIAAEIIALFERYAVSPEDIVIEITEEQ AFSDSGSSINNIQQLRDYGFRIAIDDFGTGYANFERLKRLEADIIKIDGCFVKDICTDSM DAMIVQSICNMAKTKSLCVVAEYVESAEQREMLLRFGVDYLQGYLIGKPLPLTALET >gi|333596725|gb|GL892087.1| GENE 963 1077250 - 1077612 329 120 aa, chain + ## HITS:1 COG:no KEGG:ECL_03734 NR:ns ## KEGG: ECL_03734 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 119 1 119 120 199 92.0 4e-50 MIKERMTPEELALLTGYSRQTINKWVRKEGWITSPKPGVQGGKARLVHVNEKVRDFIRSA RRATESPEMPDKAYQEGSLHALLLTLANEMTPEEQKQMTSLLLREGITGLLQRLGIRDQR >gi|333596725|gb|GL892087.1| GENE 964 1077635 - 1078000 75 121 aa, chain + ## HITS:1 COG:no KEGG:ECL_03735 NR:ns ## KEGG: ECL_03735 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 121 8 128 131 176 76.0 3e-43 MTTEELADSLGVARQTVNRWIRQKGWKTEGINGVKGGRARVICIDAHVKEHIISLPAIRN RRAVYHVEESPSHYGVATSSSLLPQIIDSLENMTTVEQERLRTLLAREGLQGFLTRLGIA E >gi|333596725|gb|GL892087.1| GENE 965 1078052 - 1079467 1621 471 aa, chain - ## HITS:1 COG:STM2415 KEGG:ns NR:ns ## COG: STM2415 COG0008 # Protein_GI_number: 16765739 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Salmonella typhimurium LT2 # 1 471 1 471 471 920 91.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARHNKGEFVLRIEDTDLERSTPEAIEAIMDG MNWLNLAWDEGPYFQTKRFDRYNAVIDEMLVAGTAYKCYCSRERLDALREEQMAKGEKPR YDGRCRHDHSEHAADEPCVVRFANPQDGSVIFDDQIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALNAPVPVYAHVSMINGDDGKKLSK RHGAVSVMQYRDDGYLPEALLNYLVRLGWAHGDQEIFSREEMIELFSLNSVSKSASAFNT DKLLWLNHHYINTMQPEYVATYLQWHIEQANIDTRTGPELADLVKLLGERCKTLKEIAES CRYFYEEFDAFDADAAKKHLRPVARQPLEVVRDKLDAITEWTAENVHHAIQATADELEIG MGKVGMPLRVAVTGAGQSPALDVTVHAIGKSRSVARINKALGFIAERESQQ >gi|333596725|gb|GL892087.1| GENE 966 1080242 - 1080583 443 113 aa, chain + ## HITS:1 COG:no KEGG:CKO_00388 NR:ns ## KEGG: CKO_00388 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 8 113 30 136 136 67 64.0 2e-10 MTTLKPVSLSAMEIGSVDNSSGGNDIASQINRLTKQITKVTQQLKEVAMGDASAEEKQKQ QELLESQLAMLQAQLAQLQRQQAEEAMPKQEKGQAVAEGVNKPSAEHQIDIYI >gi|333596725|gb|GL892087.1| GENE 967 1080574 - 1081515 676 313 aa, chain - ## HITS:1 COG:STM2424 KEGG:ns NR:ns ## COG: STM2424 COG0583 # Protein_GI_number: 16765744 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 306 1 306 308 467 81.0 1e-131 MNYSLRQLRVFVTVAQARSFSRAGEMIGLSQSAVSHSVKELETQTGVKLLDRTTREVVLT EAGQQLATRLERLLDELNSTLRDVGRLGQQLSGTVRVAASQTISAHLIPQCIAESNHRYP DIDFVLHDRPQQWVLESIRQGDVDFGIVIDPGAVSDLECEVVLSEPFLLLCRDDDPLASL PQVTWQALQGANLVLQDYASGSRPLIDAALVAQGVKATIVQEIGHPATLFPMVEAGIGIS VLPALALPLPQGSRLTVKRFVPCVERQLMLVRRKNRSLSGAAHACWDVVRMQARCLMEAR TRDPLFNETNNQM >gi|333596725|gb|GL892087.1| GENE 968 1081605 - 1082600 945 331 aa, chain + ## HITS:1 COG:STM2425 KEGG:ns NR:ns ## COG: STM2425 COG0385 # Protein_GI_number: 16765745 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Salmonella typhimurium LT2 # 1 330 1 331 332 524 89.0 1e-148 MKLFRILDPFTLTLIGVVLLASFFPARGGFVPVIEGLTTAAIALLFFMHGAKLSREAIIA GGSHWRLHLWVMCSTFILFPVLGVLFAWWAPVNVDPALYTGFLYLCILPATVQSAIAFTS LAGGNVAAAVCSASASSLLGIFVSPLLVGLLMNMHGAEGNLEQVGKICLQLLLPFVLGHL SRPWTGAFVAKHKKWIGKTDQSSILLVVYTAFSEAVVNGIWHRVGAGSLLFIVVVSIVLL AIVIAVNVFVARKCGFNKADEITIVFCGSKKSLANGIPMANILFPTSIIGMMVLPLMIFH QIQLMVCAVLARRYKAQTEKLAQEETRAAKV >gi|333596725|gb|GL892087.1| GENE 969 1082597 - 1082812 183 71 aa, chain - ## HITS:1 COG:Z3676 KEGG:ns NR:ns ## COG: Z3676 COG3530 # Protein_GI_number: 15802943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 71 1 71 72 118 94.0 3e-27 MEKEQLVEIANTEMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGRLGELMAITLLIKTEG LTQLVQPLKRP >gi|333596725|gb|GL892087.1| GENE 970 1082814 - 1084829 2052 671 aa, chain - ## HITS:1 COG:STM2427 KEGG:ns NR:ns ## COG: STM2427 COG0272 # Protein_GI_number: 16765747 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Salmonella typhimurium LT2 # 1 670 1 670 671 1234 91.0 0 MDSIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQ RVGAEPLGAFSQVRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSVDNLSWCCELKLDGLA VSILYENGVMVRAATRGDGTTGEDITTNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGDLPDTHL GRLLQFKEWGLPVSNRVQLCDSPEAVLAFYHKVEEDRPTLGFDIDGVVIKVNSLALQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN ADEIARLGLRIGDKVVIRRAGDVIPQVVNVVESERPADTRAIEFPAHCPVCGSDVERVEG EAVTRCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFTLTAG KLTGLDRMGPKSAQNIVNALEAAKNTTFARFLYALGIREVGEATAAGLAAYFGTLDALEK ATIDELQKVPDVGIVVATHVYNFFAEESNREVIGKLLEQGIHWPAPVVVNAEEIDSPFAG KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DEAEMMRLLGE >gi|333596725|gb|GL892087.1| GENE 971 1084898 - 1085890 751 330 aa, chain - ## HITS:1 COG:ECs3284 KEGG:ns NR:ns ## COG: ECs3284 COG3115 # Protein_GI_number: 15832538 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 330 2 332 332 332 74.0 5e-91 MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSSRDDDDVEDDIDGLD DDGVGEVRVHRVNTTPGAAHGEHEAPRAPQHQYQPPYASAQPRQPAPPPVEEPVRHPPQQ PVQQQPVAPQPVQPQPVQQPAQPVQQPQPVQQPQPVQQPQPQPEPPAPQPAPRVEPEPVA EPEPVVEKPQRKESVIIMNVAAHHGTHLNGDVLLNSIQQAGFKFGDMNIFHRHLSPDGSG PALFSLANMVNPGTFDPEMTGDFVTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGG VVLDDQRRMMTPQKLREYQDRIREVKEANA >gi|333596725|gb|GL892087.1| GENE 972 1086123 - 1086884 835 253 aa, chain + ## HITS:1 COG:STM2429 KEGG:ns NR:ns ## COG: STM2429 COG2981 # Protein_GI_number: 16765749 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Salmonella typhimurium LT2 # 1 253 1 253 253 422 90.0 1e-118 MVSTSSSAPRSGVWYFSQGWKLVSLPGIRRFVILPLLINIILMGGAFWWLFTRLESWIPS LMSYVPDWLQWLDYLLWPIAVISVLLVFGYFFSTIANWIAAPFNGLLAEQLEARLTGATP PDTGVLGIVKDLPRIMKREWQKFAWYLPRAIVLLILYFVPGIGQTVAPVLWFLFSAWMLA IQYCDYPFDNHKVPFKEMRTALRTQKVANMQFGALTSLFTMIPFLNLFIMPVAVCGATAM WVDCYRAKHALWK >gi|333596725|gb|GL892087.1| GENE 973 1087048 - 1088019 706 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 312 3 304 308 276 49 2e-72 MSKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM KGAIQKAEEIVASDPAKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGG TLTGVSRYIKGTKGKKDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLD LKLIDKVVAITNEEAISTARRLMDEEGILAGISSGAAVAAALKLLEDETFTNKNIVVILP SSGERYLSTALFADLFTEKELQQ >gi|333596725|gb|GL892087.1| GENE 974 1088337 - 1088594 355 85 aa, chain + ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 129 100.0 2e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTISAEGEDEQKAVEHLVKLMAELE >gi|333596725|gb|GL892087.1| GENE 975 1088640 - 1090367 2022 575 aa, chain + ## HITS:1 COG:STM2432 KEGG:ns NR:ns ## COG: STM2432 COG1080 # Protein_GI_number: 16765752 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Salmonella typhimurium LT2 # 1 575 1 575 575 1024 98.0 0 MISGILASPGIAFGKALLLKEDEIVIDRKKISADKVDQEVERFLSGRAKASAQLEAIKTK AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKGMTADAAAHEVIEGQASALEELDD EYLKERAADVRDIGKRLLRNILGLAIIDLSAIQDEVILVAADLTPSETAQLNLNKVLGFI TDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNVVYVNPTNDVIEQLR SVQEQVATEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVDGAERNGAEGVGLYRTEFL FMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAV RIAMDRKEILRDQVRAILRASAFGKLRIMFPMIISVEEVRALKKEIEIYKQELRDEGKAF DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >gi|333596725|gb|GL892087.1| GENE 976 1090408 - 1090917 743 169 aa, chain + ## HITS:1 COG:STM2433 KEGG:ns NR:ns ## COG: STM2433 COG2190 # Protein_GI_number: 16765753 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Salmonella typhimurium LT2 # 1 169 1 169 169 285 99.0 3e-77 MGLFDKLKSLVSDDKKDSGTIEIVAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDPV IEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >gi|333596725|gb|GL892087.1| GENE 977 1090962 - 1091798 966 278 aa, chain - ## HITS:1 COG:pdxK KEGG:ns NR:ns ## COG: pdxK COG2240 # Protein_GI_number: 16130344 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli K12 # 3 277 4 278 283 389 68.0 1e-108 MEMILFRDNTRAQQTDIVAVQSQVVYGSVGNSIAVPNIRTHRLNVTAVPTVLFSNTPHYD TFYGGVIPDEWFSGYLKALEEREILRELKAVTTGYMGSASQIVLLAQWLKAIKVQHPDLL VLVDPVIGDIDSGMYVKPDIPEAYREHLLPLAQGITPNVFELEVLSGKPCRTPESAIAAA QGLLSDSLKWVAITSAPVADDPQNIHVVLVSEEGVTVSAHPRVETDLKGTGDLFCSELVS GIVGGKTVADAIRMAGDRVTDVMIYTQSKGYDELILPA >gi|333596725|gb|GL892087.1| GENE 978 1091804 - 1092724 546 306 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 295 1 304 308 214 39 9e-54 VKIVNTLEHTIGNTPLVKLQRMGCDNGSEIWVKLEGNNPAGSVKDRAALSMIVQAEKRGE IKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVSKEQ GMEGARDLALAMAERGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTDGRITHFVSSMGTTG TITGVSRFLREQEKAVTIVGLQPEEGSSIPGIRRWPAEYMPGIFNAQLVDQVLDIHQREA ENTMRELAVREGIFCGVSSGGAVAGAIRVAKSTPGAVVVAIICDRGDRYLSTGVFGEESY SQGAGI >gi|333596725|gb|GL892087.1| GENE 979 1092834 - 1093928 1452 364 aa, chain - ## HITS:1 COG:cysA KEGG:ns NR:ns ## COG: cysA COG1118 # Protein_GI_number: 16130348 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli K12 # 1 364 1 365 365 672 93.0 0 MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR FHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAATIKAKVTKL LEMVQLAHLADRFPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR QLHEELQFTSVFVTHDQEEAMEVADRVVVMSQGNIEQVDEPEQLWREPATRFVLEFMGEV NRLQGTIRGGQFHVGAHRWPLGYTSAHQGPVDLFLRPWEVDVSRRTSLDSPLPVQVLEAS PKGHYTQLVVQPLGWYTEPLTVVMRDDVPPHRGERLFVGLQHARIYHGNERIETREDIAL AESA >gi|333596725|gb|GL892087.1| GENE 980 1093918 - 1094793 1032 291 aa, chain - ## HITS:1 COG:STM2442 KEGG:ns NR:ns ## COG: STM2442 COG4208 # Protein_GI_number: 16765762 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 291 1 291 291 501 90.0 1e-142 MAEVTQLKRYDAPRINWGKWFLIGTGVLVSTLILVVPTVYIFVHAFSEGLMPALNNLADP DMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV YLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAA VLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE LLQQDYNTIGSFTAAALLTLMAILTLFLKSVVQWRLENQEKRQHQEGNHEH >gi|333596725|gb|GL892087.1| GENE 981 1094793 - 1095626 1013 277 aa, chain - ## HITS:1 COG:ECs3295 KEGG:ns NR:ns ## COG: ECs3295 COG0555 # Protein_GI_number: 15832549 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 427 97.0 1e-120 MFAVSTKRVLPGFTLSLGTSLLFVCLILLLPLSALVMQVAEMSWSQYWEVVTNPQVVAAY KVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFS VNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGAT RWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH >gi|333596725|gb|GL892087.1| GENE 982 1095626 - 1096639 1430 337 aa, chain - ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 336 1 337 338 607 92.0 1e-173 MTVTVLKKGSLALAGLLLVAQAQATELLNSSYDVSRELFAALNPAFEQQWAKENNGDKLT IKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYST MGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGNDKAKTE QFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTN ILAEFPVAWVDKNVKANGTEKAAKAYLNYLYSPQAQTVITDYYYRVNNPDVMNKLKDKFP QTELFRVEDHFGAWPEVMKTHFASGGELDKLLAAGRK >gi|333596725|gb|GL892087.1| GENE 983 1096802 - 1097701 1140 299 aa, chain - ## HITS:1 COG:STM2446 KEGG:ns NR:ns ## COG: STM2446 COG2837 # Protein_GI_number: 16765766 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 299 584 92.0 1e-167 MSQVQSGILPEHCRAAIWIEANVKGDVDALRAASKVFVDKLATFQAKFPEAHLGAVVAFG NTVWRQLSGGEGAEELKDFIPYGKGLAPATQYDVLIHILSLRHDVNFSVAQAAMEAFGDS LDVQEEVHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL KQLNRMSVHDQEMMIGRTKDANEEIDGDARPVTSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLYNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSVERLLAL >gi|333596725|gb|GL892087.1| GENE 984 1097794 - 1098369 745 191 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2953 NR:ns ## KEGG: Ent638_2953 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 191 1 194 194 321 82.0 1e-86 MKSLRLLLCALPLALTGCSTLSSINWSAAYPWNWFGSSTEVTEQGVGKITAATALDQDAI QDAIGSDYRLRSGMKTENGNIVRYFEALKDDKVAMVINGDNGTVNRIAVMDEEIPTSGGV KVGTPFGELYQKAFGHCASVPSDDSVAVECKADGSQHISYVFSGTWNGPEGLMPSDDTLK KWKVSKIIWKQ >gi|333596725|gb|GL892087.1| GENE 985 1098433 - 1098882 258 149 aa, chain - ## HITS:1 COG:no KEGG:ECL_03756 NR:ns ## KEGG: ECL_03756 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 149 1 149 149 230 87.0 2e-59 MKSTEFHPGDYDVHGRLRLPFLFWCVLLLQARTWVLFVMAGASRGQGDTLLNLFYPDHDA FWLGLLPGVPAVLAFLCSGRRQALPRFWRALRWLLILAQVVLLVWQPVLWLYGEPLSGIG IALVVADIVALLWLVTNPRLRACFTQESD >gi|333596725|gb|GL892087.1| GENE 986 1098869 - 1099294 573 141 aa, chain - ## HITS:1 COG:STM2449 KEGG:ns NR:ns ## COG: STM2449 COG0456 # Protein_GI_number: 16765769 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 141 38 178 178 278 95.0 2e-75 MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKVNHDVSLFLVAEVNGEVVGTVMG GYDGHRGSAYYLGVHPEYRARGIANALLNRLEKKLIARGCPKIQIMVREDNDVVLGMYER LGYEHADVLTLGKRLIEDEEY >gi|333596725|gb|GL892087.1| GENE 987 1099507 - 1100382 938 291 aa, chain + ## HITS:1 COG:ECs3306 KEGG:ns NR:ns ## COG: ECs3306 COG0860 # Protein_GI_number: 15832560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 291 1 289 289 481 90.0 1e-136 MSTFKPLKALTSRRQVLKAGLAALTLTGIAQQAQAKEESTLKTSNGHSKPKTKKAGAKRL VMLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRSNGIDARLTRTGDTFIPLYDRV EIAHKHGADLFMSIHADGFTNPSAAGASVFALSNRGASSAMAKYLSDRENRADEVAGKKA TDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKRIKPVHRLHSKSTEQAAFVVLKSPSIPS VLVETSFITNPEEERLLGTTAFRQKIANAIASGVISYFNWFDNQKAHSRKR >gi|333596725|gb|GL892087.1| GENE 988 1100382 - 1101281 1163 299 aa, chain + ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 1 299 1 299 299 555 86.0 1e-158 MKPNAQLVKTFLMQLQDAICQKLAAADGGEFQEDAWQREAGGGGRSRVLRNGGIFEQAGV NFSHVHGDAMPASATAHRPELAGRCFEAMGVSLVVHPHNPFVPTSHANVRFFIAEKPGAD PVWWFGGGFDLTPYYGFEEDAVHWHTTARDLCLPFGEDVYPKYKKWCDDYFYLKHRDEQR GIGGLFFDDLNTPDFDTAFSFMRAVGEGFTDAYLPIVERRKNTDYGVREREFQLYRRGRY VEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYSYEPKEGSPEAALKEFIQVREWV >gi|333596725|gb|GL892087.1| GENE 989 1101361 - 1103640 3056 759 aa, chain - ## HITS:1 COG:STM2472_1 KEGG:ns NR:ns ## COG: STM2472_1 COG0281 # Protein_GI_number: 16765792 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Salmonella typhimurium LT2 # 1 434 1 434 434 823 96.0 0 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALVYSPGVAAPCLEIEKDPLAAYKY TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI NVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV VEKNLSDVRMVVSGAGAAAIACMNLLVALGMQKHNIVVCDSKGVIYKDREPNMAETKAAY AVEDDGKRTLEDVIDGADIFLGCSGPKVLTQEMVQKMARAPMILALANPEPEILPPLAKA VREDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVHAIAELAHAEQS EVVASAYGDQDLSFGPDYIIPKPFDPRLIVKIAPAVAKAAMDSGVAMRPIDDFDAYVDKL TEFVYKTNLFMKPIFSQARADAKRVVLAEGEEARVLHATQELITLGLAKPILIGRPSVIE MRIQKLGLQIKPGVDFEIVNNESDPRFKEYWNEYYSIMKRRGITQEQAQRAVISNTTVIG AIMVHRGEADALICGTIGEYHEHFSVVQEIFGYREGVHTAGAMNALLLPSGNTFIADTYV NDDPSPEELAEITVMAAETVRRFGIEPKVALLSHSNFGSSKSAAACKMRQTLELVRERAP ELMIDGEMHGDAALVESIRNERMPDSPLKGSANVLIMPNVEAARISYNLLRVSSSEGVTV GPVLMGVSKPVHVLTPIASVRRIVNMVALAVVEAQTQPL >gi|333596725|gb|GL892087.1| GENE 990 1103927 - 1104877 1218 316 aa, chain + ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 537 83.0 1e-153 MNQLDGIKQFTTVVADSGDIESIRHYQPEDATTNPSLLLKAAGLAHFSHLIDDALAYGKK RGKTQEQQVAEASDKLAVNIGAEILKSIPGRVSTEVDARLSFDQEKSINKARRLVELYQE QGIDKSRILIKLASTWEGIRAAEVLEKEGIHCNLTLLFSFAQARACAEAGVFLISPFVGR IYDWYQAKQPMDPYVVDEDPGVKSVRNIYDYYKQHRYETIVMGASFRRTEQILALAGCDR LTISPDLLKKLQESEETVIRKLVPTSTVLPKPKAMTEAEFRWEHNQDPMAVEKLADGIRQ FAVDQRKLEDLLAAKL >gi|333596725|gb|GL892087.1| GENE 991 1104897 - 1106885 2955 662 aa, chain + ## HITS:1 COG:STM2474 KEGG:ns NR:ns ## COG: STM2474 COG0021 # Protein_GI_number: 16765794 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Salmonella typhimurium LT2 # 1 662 1 662 666 1261 92.0 0 MSRKELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI LSNGHASMLLYSLLHLSGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA NAVGLAIAERTLAAQFNQPDHEIVDHYTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF YDHNGISIDGEIEGWFTDDTAKRFEAYHWHVVHEIDGHDPEAVKKAIQEAQSVKDKPSLI ICRTTIGFGSPNKAGKEEAHGAALGEEEVALTRQKLGWKHPAFEIPKEIYKAWDARETGE KAQQAWNEKFAAYKKAYPELAAEFSRRMSGGLPEDWEEKTQALIENLQSNPAKIATRKAS QNTLNAIGPVLPELLGGSADLAPSNLTIWSGSKSLKEDIAGNYIHYGVREFGMTAIANGI AHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLAS LRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQIERTPEQVKNIARGGY ILKDSGGKPDVILIATGSEVEITVKAAEKLTAEGHAVRVVSLPSTDIFDAQDETYRESVL PSNVAARVAVEAGIADYWYKYVGLKGAIVGMKGYGESAPADKLFPYFGFTVENVVEKALS VL >gi|333596725|gb|GL892087.1| GENE 992 1106966 - 1107850 915 294 aa, chain - ## HITS:1 COG:no KEGG:ECL_03763 NR:ns ## KEGG: ECL_03763 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 294 54 347 347 524 89.0 1e-147 MTLSRSAGAKTDASLRIDLGGLSAPPVKEPDIAPRLLLDNAPLKLTSQHWQLTPWHLKTD DTGTITTFLKTIQEGQALTLRGGKQTISLAGLKAALLFIDAQQKRVGSETAWIKKGDSPP LSVPPAPALKKVAVVNPTPTPLTHNELNDLLDYGTWRMNHSQCSLDPNRREVRVTALTDD KALMIISCEAGAYNTVDLAWLVSRKKPFAARSVRLRLPFTPSSQSSDMELMNASFDEKTR ELTTLALGRGIGDCGIQTRWRFNGQRFRLVRYAEEPSCDNWNGPDAWPTLWITR >gi|333596725|gb|GL892087.1| GENE 993 1108119 - 1108709 725 196 aa, chain - ## HITS:1 COG:yffH KEGG:ns NR:ns ## COG: yffH COG0494 # Protein_GI_number: 16130392 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 191 1 191 191 313 78.0 1e-85 MSLNITVIKDKILSENYFVLRNITYDLTRKNGDVIRHKREVYDRGNGATILLYNREKQSV VLIRQFRIATWVNGNADGRLIESCAGLLDDDEPEVCIRKEAIEETGFEVGAVQKVFELYM SPGGVTELVHFFVAEYTDAQRTHRGGGVDDEDIEVLEMPFAQAVDMVKRGEIRDGKAVIL LQYLQTSGLMNAAAVA >gi|333596725|gb|GL892087.1| GENE 994 1108777 - 1110753 1422 658 aa, chain - ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 181 658 2 479 479 826 82.0 0 MNRFIMANAQQCIGCRACEVACVMAHNGEQHVLSERHFHPRITVLSSGLRKSPVTCHHCE NAPCVQSCPNGAITQHSDSVQVNQQKCIGCKACVVACPFGTMDMLVTPRENDSVKASAHK CDLCLERPQGPACVENCPAEVLTLATPAVLDNLAKQRRQRSARLDALPWHSEATQSVPSQ TKRQQMQNTPARGEPDKLSPEARACHFNEIYLPFRPEQAQREASRCLKCGEHSICEWTCP LHNHIPQWIERVRAGDITGAAELSHQTNCLPEITGRVCPQDRLCEGACTLRDASGAVTIG NIERYISDRALAMGWTPDVSHVTPVGKRVAVIGAGPAGLACADVLVRSGVGVTVYDRHPE IGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEVGKDVSMAQLQNDYDALFIGVG TYRSMKAGIPHEDAPGVYDALPFLVANTRNVMGLEPAADEPFIDTQGLSVVVLGGGDTAM DCVRTALRHGAAKVTCAYRRDEANMPGSKKEVKNAKEEGAAFEFNVQPIELTLDANGKVN GIRMLRTRLGEPDAQGRRRPVPVAGSEFVMPADAVIMAFGFNPHAMPWLQAQGVDTDDWG RIRASVESRYRYQTSNPQIFAGGDAVRGADLVVTAMAEGRHAAQGIMDWLGVPPRSMH >gi|333596725|gb|GL892087.1| GENE 995 1110637 - 1110909 128 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|295097988|emb|CBK87078.1| ## NR: gi|295097988|emb|CBK87078.1| hypothetical protein ENC_38080 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 90 1 90 90 162 93.0 7e-39 MKMALAQHVLFPIVRHHTGDFAGATTDTLLSIGHNKTIHNNTCFWFNNLILSIVIVFTHS GMATQCSNAQEDELFPVNLWQINLIQEADE >gi|333596725|gb|GL892087.1| GENE 996 1110957 - 1112600 1731 547 aa, chain + ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 1 547 18 564 566 704 66.0 0 MIVLSVLISAIALVTLASSQRDAEAINIAGSLRMQSYRLGYEMQRASPSLAQHRAVWQKT LSAPALQKLNRWYVPEDVKQRYQQLHLGWQEMDKRIASGDTGWYQHHIEDFVGRIDAFVL ALQYYTEHKIQLVIFMSLTGGLGILLLAVFTLRRIRRQVVLPLNNLVAASERIEQGQFDT PAPDTALPNELGQLSRAFNHMSAELHTLYRSLEHSVAEKTRHLNEAHQQLEMLFKCSQAL NTGQIDSHCFRHILQIVHDYTQMNYLQLRTSDDWQLCEGQESPGEKMHNLPVLMQDTLYG ELRWQSTTGDVPLPLMESVATMLGRGLYFNQAQKHYQQLLLMEERATIARELHDSLAQVL SYLRIQLTLLKHAVPGDNAPAQTIITDFSRELNNAWHQLRELLTTFRLTLNHANLPAALQ ESLDGLQSQTRAKLVLDCRLSSLALDAQKQVHLLQIVREAVLNAIKHADASEIVVSCVTT ADGTHTVTIRDNGIGIGEASEPPGHYGLNIMRERAGRLGGTLHFSQPPQGGTQVSVTFRT PAAQAEK >gi|333596725|gb|GL892087.1| GENE 997 1112742 - 1115855 3664 1037 aa, chain + ## HITS:1 COG:acrD KEGG:ns NR:ns ## COG: acrD COG0841 # Protein_GI_number: 16130395 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1037 1 1037 1037 1909 91.0 0 MANFFIDRPIFAWVLAILLCLTGVLAIASLPVEQYPDLAPPNVRITANYPGASAQTLENT VTQVIEQNMTGLDNLMYMSSQSSATGQATVTLSFTAGTDPDEAVQQVQNQLQSALRKLPQ AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRINGVGDIDAYGS QYSMRIWLDPNKLNSVQMTAKDVTDAIESQNAQIAVGQLGGTPSVDNQALNATINSQSLL QTPEQFRNITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGNAASGLGVKLASGANEM ATAQRVLDRLDELSHYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLYAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM SEEGLSPREATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGTTGAIYRQFSITIVSAMVL SVLVAMILTPALCATLLKPLHKGEHHGQKGFFGWFNRMFNRNAARYEAGVGKVLHRSVRW LVVYVLLLGGMVFLFLRLPTSFLPLEDRGMFITSVQLPSGSTQQQTLKVVQKVENYFHTQ EKDNVVSVFSTVGSGPGGNGQNVARMFVRLKDWDQRDSDTGSSFAIIERATKAFNKIKEA RVFASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARDKLLDLAGKDPQLTRVRHNGLD DSPQLQVDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQSAAKYRML PDDINRWYVRNNTGGMVPFSAFATSRWETGSPRLERYNGYSALEIVGEAAPGVSTGTAMD IMEKLVQQLPTGFGLEWTAMSYQERLSGAQAPALYALSLLVVFLCLAALYESWSVPFSVM LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNAKGHELMTA TLHACRQRLRPILMTSLAFVFGVLPMATSSGAGSSSQHAVGTGVMGGMISATILAIYFVP LFFVLVRRRFPLKDKPE >gi|333596725|gb|GL892087.1| GENE 998 1116413 - 1116769 259 118 aa, chain + ## HITS:1 COG:ECs3333 KEGG:ns NR:ns ## COG: ECs3333 COG1393 # Protein_GI_number: 15832587 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 192 77.0 1e-49 MVVMYGIKNCDTIKKARRWLEAHNIDYRFHDYRADGLDPAFLHSAINELGWEALLNTRGT TWRKLDESLRATINDADSAARLMLEMPAIIKRPLLCKPGQPMLLGFSETLYSDLFVEV >gi|333596725|gb|GL892087.1| GENE 999 1116773 - 1117900 1228 375 aa, chain + ## HITS:1 COG:STM2483 KEGG:ns NR:ns ## COG: STM2483 COG0624 # Protein_GI_number: 16765803 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Salmonella typhimurium LT2 # 1 375 1 375 375 746 93.0 0 MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRAIGFTVEHMDFGDTQNFWAWRGQGET LAFAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN HKNRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSTEVVGDVVKNGRRGS LTCNLTIHGVQGHVAYPHLADNPVHRAAPMLNELVGIEWDKGNEFFPPTSMQIANIKAGT GSNNVIPGDLFVQFNFRFSTELTDEMIKARVIALLEKYQLRYTIDWWLSGQPFLTQRGKL VDAVVNAIAHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ LLARMYQRIMEQLVA >gi|333596725|gb|GL892087.1| GENE 1000 1117925 - 1118122 238 65 aa, chain + ## HITS:1 COG:no KEGG:ECs5496 NR:ns ## KEGG: ECs5496 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157J # Pathway: not_defined # 1 49 1 49 66 81 93.0 1e-14 MDWLSKYWWILVLVFLVGVLLNVIKDLKRVDHKKFLANKPDLPPHRDFNDKWDDEDDWPK KDQKK >gi|333596725|gb|GL892087.1| GENE 1001 1118220 - 1118915 796 231 aa, chain - ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 231 9 240 240 392 80.0 1e-109 MKHDHFVVQSPDTPAKQLLLLFHGVGDNAVNMGQIGSWFAPVFPQALIVSIGGVEPCGPN GRQWFSVEGVTEENRQARIDAVMPAFIDTVRYWQQQSGVGADATALIGFSQGSIMSLESV KAQPGLVSRVIAFNGRFATLPQSATTQTTIHLIHGGEDRVIELSHAVAAQDALIREGGDV TLDIVDDLGHAIDDRSMQFALDHLRYTVPKHYFDEALSGGKPNDDDIVEFM >gi|333596725|gb|GL892087.1| GENE 1002 1118989 - 1120935 1187 648 aa, chain - ## HITS:1 COG:ZypfI KEGG:ns NR:ns ## COG: ZypfI COG1444 # Protein_GI_number: 15802997 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 1 648 4 671 671 790 62.0 0 MLGFEQLVNQLQRTGHRRLVVLSGDEPWTLSQAIILRNTLPGDWLWLEENPSKAISGLLG REYLHAVFDARRGFDVSAFAALSGTLRAGSLLVLLVPPFSVWANRPDADSLRWSDSAEPI ATPHFVHHFCRTLAADADAIVWHQHRPLSLPVTPNLPAWQPASGEPQRQQAEILDALLTM PAGVAAVTAPRGRGKSALAGMLLNGIQGSAVVTAPAKGATDVIARFAGEQFHYMAPDALL ASTTEADWLIVDEAAAIPGPLLEKLASRFPRVLLTTTVQGYEGTGRGFLLKFCAHFSGLR RYTLSTPIRWAAGCPLERIVANALLFDDALLDHKPEGEVRLTSLAPEMWESDPARVASVY ELLCAAHYRTSPLDLRRMMDAPGQHFAVAHAGVDITGALWLVEEGGLTPQLSRAVWAGFR RPRGNLVAQSLAAHGGSPLAATLKGRRVSRIAVHPHRQREGIGQRLIRSASGEDYLSVSF GYTHELWRFWQQCGFVLVRMGSHREASSGCYTAMALLPLSEAGRQLCEQAHQRLCRDMRV LSAWNGEKIPVTDAWEATLNSDDWLELAGFAFAHRAFSTSVAALTRLLSAVDMPLPTLRG KMEGNTHDFGQKALLAKLREETAHALERLDYPRSRQLKADILQWQFFQ >gi|333596725|gb|GL892087.1| GENE 1003 1120935 - 1121804 814 289 aa, chain - ## HITS:1 COG:ECs3337 KEGG:ns NR:ns ## COG: ECs3337 COG2321 # Protein_GI_number: 15832591 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Escherichia coli O157:H7 # 1 289 1 287 287 489 89.0 1e-138 MRWQGRRESDNVEDRRSSGGGGPSMGGPGFRLPSGKGGIILLVVVLVAGYYGVDLTGLMT GETGQQQQYSQRSISPNEDEAAKFTSVILATTEDTWSQQFEKMGRTYQPPKLVMYRGATR TGCGTGQSVMGPFYCPADSTVYIDLSFYDDMKSKLGADGDFAQGYVIAHEVGHHVQKLLG IEPKVRQMQQNASQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAI GDDRLQQQSQGRVVPDSFTHGTSEQRYSWFKRGFDSGNPSQCNTFGKAM >gi|333596725|gb|GL892087.1| GENE 1004 1121925 - 1122638 1077 237 aa, chain - ## HITS:1 COG:STM2487 KEGG:ns NR:ns ## COG: STM2487 COG0152 # Protein_GI_number: 16765807 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Salmonella typhimurium LT2 # 1 237 1 237 237 456 94.0 1e-128 MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTK LAEAGIPTQMEALLSDTECLVKKLDMVPVECVIRNRAAGSLVKRLGIEEGIELNPPLFDL FLKNDAMHDPMVNESYCETFGWVSKENLARMQELTYKANDVLKKLFDDAGLILVDFKLEF GLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGVVEAYEAVAHRLGVKLD >gi|333596725|gb|GL892087.1| GENE 1005 1122748 - 1123782 1280 344 aa, chain - ## HITS:1 COG:nlpB KEGG:ns NR:ns ## COG: nlpB COG3317 # Protein_GI_number: 16130402 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 344 2 345 345 558 86.0 1e-159 MAYSVQKSRLAKVAGVSLVMLLAACSSDSRYKRQVSGDESYLDAPPLAELHAPAGMILPI QNGDYNIPVTNGSGLVGKALDIRPPAQPLALVSGARTQFTGDTASLLVESARGTTLWPQV VSVIQSKNYTIDKRDDASQTLTTDWIEWNRLDEDQQYRGRYQVSVKPQGYQQAVTVKLLN LEQAGKPVADPAAMQRYSTEMLNVIAAGLDKNATDAANAAQNRNGSTFDVQSGADDTGLP MLVVRAPFNQTWQRLPATLEKVGMKVTDSTRSTGSITATYKPLSDSAWQELGASDPQLPS GDYKIQVGDLDNRSSLQFIDPKGHTLTQAQNDALVAAFQAAFSK >gi|333596725|gb|GL892087.1| GENE 1006 1123799 - 1124677 815 292 aa, chain - ## HITS:1 COG:STM2489 KEGG:ns NR:ns ## COG: STM2489 COG0329 # Protein_GI_number: 16765809 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Salmonella typhimurium LT2 # 1 292 1 292 292 544 92.0 1e-155 MFTGSIVALVTPMDEKGNVCRSSMKKLIDYHVANGTSAIVSVGTTGESATLSHEEHGDVV MLTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPTQEGLFQHFK AIAEHTDLPQILYNVPSRTGCDMLPETVGRLSKVKNIIGIKEATGNLSRVHQIKELVSDD FILLSGDDATALDFMQLGGNGVISVTANVAARDMADMCKLAAAGHFDEARVINQRLMPLH NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDHGREIVAGALKHAGLL >gi|333596725|gb|GL892087.1| GENE 1007 1124949 - 1125392 406 147 aa, chain + ## HITS:1 COG:STM2490 KEGG:ns NR:ns ## COG: STM2490 COG2716 # Protein_GI_number: 16765810 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Salmonella typhimurium LT2 # 1 147 65 212 212 248 84.0 2e-66 MLGEEFTFIMLLSGTWNAITLIESTLPLKGAELDLLIVMKRTTARPRPALPATVWVQVEV PDSPHLIERFTALFDSHQMNIAELVSRTQPGDENAIPTLFIQITAHSPASQDASNIEQAF KALCTELHAQGSISVVDYSQHEQDGVE >gi|333596725|gb|GL892087.1| GENE 1008 1125392 - 1125862 581 156 aa, chain + ## HITS:1 COG:STM2491 KEGG:ns NR:ns ## COG: STM2491 COG1225 # Protein_GI_number: 16765811 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Salmonella typhimurium LT2 # 1 156 1 156 156 316 96.0 1e-86 MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL KKVGVEVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIH RISFLIGADGKVEHVFDDFKTSNHHDVVLNWLKENA >gi|333596725|gb|GL892087.1| GENE 1009 1125943 - 1127013 1641 356 aa, chain - ## HITS:1 COG:STM2493 KEGG:ns NR:ns ## COG: STM2493 COG0628 # Protein_GI_number: 16765813 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 1 347 1 347 355 564 94.0 1e-161 MLEMLMQWYRRRFSDPEAIALLVILVAGFGILFFFSGLLAPLLVAIVLAYLLEWPTARLE HIGCSRRWATSIVLVLFVGILLLMSFVVLPVAWQQGIYLIRDMPGMLNKLSDFAATLPRR YPALMDAGIIDAMAENMRARIMTMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDK EQMLNAVRRVLPRNRGLAGQVWQEMNQQITNYIRGKVLEMIVVGVATWIGFVIFGLNYSL LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQGLDGNLLVPVL FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDVPAVEEKSL >gi|333596725|gb|GL892087.1| GENE 1010 1127234 - 1128697 1756 487 aa, chain + ## HITS:1 COG:ECs3356 KEGG:ns NR:ns ## COG: ECs3356 COG4783 # Protein_GI_number: 15832610 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 798 89.0 0 MFRQLRKTLVATLIAAVTVGQVLPAFADSSDSLPDMGTTAGSTLSIGQEMQMGDYYVRQL RGSAPLINDPLLVQYINGLGMRLVAHADSVKTPFHFYLINNDEINAFAFFGGNVVLHSAL FRYSDNESQLASVMAHEISHVTQRHLARAMEDQKRNAPLTWVGALGSILLAMASPQAGMA ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPSFLEKLLDQARYSSRPP EILLTHPLPESRLSDARNRANQMRPVVVQSSQDFYMAKVRTLGMYNSGRNQLTSDLLDAL AKGNVREKNAAQYGQALQAMEASKYDEARKALQPLLASAPDNPWYLDLATDIDLGQKKAT DAINRLKGAKDIRNNPVLQLNLANAYLQGGQPGEAVTILNRYTFNNKDDQNGWELLAQAQ GQLGNRDQELAARAEGLALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRGLQQR FKPYEKM >gi|333596725|gb|GL892087.1| GENE 1011 1128711 - 1129067 532 118 aa, chain + ## HITS:1 COG:ECs3357 KEGG:ns NR:ns ## COG: ECs3357 COG1393 # Protein_GI_number: 15832611 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 118 1 118 119 174 80.0 3e-44 MTDAVKIYHNPRCSKSRETLNLLKSNGIEPELVLYLETPPDTQTIRQLLKMLNMGSARDL MRQKEDLYKSLNLNDTTLTEDRLIQAMVDNPKLIERPIVVANGKARIGRPPEDVLKIV >gi|333596725|gb|GL892087.1| GENE 1012 1129064 - 1129888 695 274 aa, chain - ## HITS:1 COG:no KEGG:ECL_03782 NR:ns ## KEGG: ECL_03782 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 272 1 272 274 442 82.0 1e-123 MEIKLHANATTTPRIRRYLQQSDKSDRELALELGISVTTVRRWRNRDQVSDNHTTPKVIH KALRQEQAALINALRDITGAPLDELLLLVNDGLGIAVSRATLNRYLKPASAKQKGASLQG KKALKAGIVPQKLFLHHLPLSLHMDDGGEQHLLWAREPVSGWCYARLYAGVSPQLLTHWT NEVLEACPADIQSVETFGLAVTLPGHRVSVKVHPQQNLAVQVAPPLRDIIPRLNSEPAGE LLIQLCEFYNSGKAQKKLGESTPQAFLEALRRND >gi|333596725|gb|GL892087.1| GENE 1013 1130036 - 1131355 1847 439 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 419 1 428 444 348 44.0 1e-95 MNNVLGFLEAKLMPLAAKTAQQRHLGAIRGAYVSFMPFIIVGSILLVISSFPNQAYQQFM SHAFGESWSAIIEIPFNAVFSTMSLFISFLVAYRLAEHYGEDRISCGILALVAFLILTPF IKVAENGGITVIPVEWIGCKGLFVAMIGSLLWTELFCWLKRKKLVIKMPDGVPPAVQESF AALIPALLVMILVLGIRIIFENTHYNTIHQFIYEVVATPVRHYGTSYFGALMTVFSITIL WSVGINSGSMINGIIRPLWMENQTDNIAAIQAGTTPPHIITEQFFDMIWMGGAGATLSLV IAMLIFARSKNMREVARLGAGASVFNINEPILFGLPVIMNPIMLIPFNLVPLVLVTVQYL AMKIGAVAVTTGVFIPWTLPPVISGFIVTGHLSGSVMQLINLLIGAMLYLPFMRIVDKQY RAAELTPATQPDTTLAKQE >gi|333596725|gb|GL892087.1| GENE 1014 1131359 - 1132315 1250 318 aa, chain + ## HITS:1 COG:CC2359 KEGG:ns NR:ns ## COG: CC2359 COG1446 # Protein_GI_number: 16126598 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Caulobacter vibrioides # 3 280 20 312 327 144 34.0 3e-34 MWGIIATWRMALEGVTESASALAAGKPVATAVVDAVAAVEDFPLYKSVGYGGLPTENGEV ELDAAYMDGDTLAFGAVGNLVDIANPVRVAHALSRQRYNSLLVGQGAREWALSQGFADKT MLTDRAMQHYRKRCRETLDKGLSPYDGHDTVGIIGLDKQGSMSVATSTSGLFMKKRGRLG DSPIIGSGFYCDSETGAATATGVGEDLMKGCTSYEIVRRMAQGMSPQQAADSVVFELEDK LMSRFGRAGDLSVVCMNNKGEFGAATNIKTFSFVVATDRQPLTVYRTERLREKTHYHAVD DEWMQAYAARIRAPIEES >gi|333596725|gb|GL892087.1| GENE 1015 1132315 - 1133733 1322 472 aa, chain + ## HITS:1 COG:PA3831 KEGG:ns NR:ns ## COG: PA3831 COG0260 # Protein_GI_number: 15599026 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Pseudomonas aeruginosa # 141 469 166 491 495 261 45.0 1e-69 MITYQFINALSDAKPQCHFIASASCTLLPETALVAEMRASDGIADTRFGCAPFGRITLLP DALWHDALTEGLLTALRPLLATPTSAELLLDVTDIDDVVLVQVLRFLFNQAHRLSDLKLK KTDEAVRLTCITALCLPEQQAKLETIFRQQQAVAHGMVAARRLADTPSDRCTPQFVVEEA QKLCAAFPALRCDVLDETQIVEQGLGLLHAVGKGATCPPRLLAIHYEGAHDGPVRCYVGK GITFDTGGLWLKEGAGMYTMKYDMCGAANVLGLMLTVAELKLPVRIMGVLALAENAIGPE AMQPGTVATACNGTTVEINNTDAEGRLVLADAIAWASKRHPQARYIIDMATLTGAVVKAL GYALSGLMTQDEPLRAALTQAGKQSGDEVWSLPLDARLKKQTDSAIADLCNTPTNNAAIS ASAAWLLHHFCPPTIPWAHLDISGTALWRENGRSVASGRPIPLLVEHLLGDL >gi|333596725|gb|GL892087.1| GENE 1016 1133820 - 1134413 653 197 aa, chain - ## HITS:1 COG:ECs3358 KEGG:ns NR:ns ## COG: ECs3358 COG0593 # Protein_GI_number: 15832612 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli O157:H7 # 1 197 52 248 248 377 94.0 1e-105 MLRQEHSGYIYIWSREGAGRSHLLHAACAELSARGDAVGYVPLDKRTWFVPEVLEGMEHL SLVCIDNIECVAGDEPWEMAIFNLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDW GQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFDTLDQLDRASI TAQRKLTIPFVKDILKL >gi|333596725|gb|GL892087.1| GENE 1017 1134618 - 1135907 1032 429 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 3 426 2 431 447 402 47 1e-110 MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILFHINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVMF PPAAMGAIVAVIGLELAGVAANMAGLLPADGQSPDSKTIIISLVTLGVTVFGSVLFRGFM AIIPILIGVLAGYALSFVMGVVDTTPIAEAHWFALPTFYTPRFEWFAIFTILPAALVVIA EHVGHLVVTANIVKRDLIRDPGLHRSMFANGFSTIISGFFGSTPNTTYGENIGVMAITRV YSTWVIGGAAIIAILLSCVGKLAAAIQIIPVPVMGGVSLLLYGVIGASGIRVLIESKVDY SKAQNLILTSVILIIGVSGAKVHIGAAELKGMALATIVGVGLSLIFKLISVIRPEEVVLD ADDSEKAPH >gi|333596725|gb|GL892087.1| GENE 1018 1135990 - 1136616 978 208 aa, chain - ## HITS:1 COG:STM2498 KEGG:ns NR:ns ## COG: STM2498 COG0035 # Protein_GI_number: 16765818 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 380 95.0 1e-105 MKIVEVKHPLVKHKLGLMREHDISTKRFRELASEVGSLLTYEATSDLETEKVTIEGWNGP VQVEQIKGKKITVVPILRAGLGMMEGVLEHVPSARISVVGIYRNEETLEPVPYFQKLVSN IDERMALVVDPMLATGGSMIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYT ASVDQGLNEHGYIIPGLGDAGDKIFGTK >gi|333596725|gb|GL892087.1| GENE 1019 1136833 - 1138263 1812 476 aa, chain - ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 476 1 477 478 782 76.0 0 MSGFKAGFLWGGAVAAHQLEGGWKEGGKGVSVADVMTAGAHGVPREITNGVLEGKNYPNH EAIDFYHRYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDELEPNEAGLKFYDDLFDECLKH GIEPVITLSHFEMPFHLVTEYGGWRNRKLIDFFVRFAKVVFERYQHKVKYWMTFNEINNQ ANFHEDFAPFTNSGLKYAPGEDREPVMFQAAHYELVASALAVKAGREINPSLQIGCMIAM CPIYPLTCAPDDMMMAMNAMHRRYWFTDVHVRGKYPQHLLNYFERRGFALDITEEDKAAL TQGCVDYIGFSYYMSFATKATADNPTLDYDESKSLVSNPYVQKSDWGWQIDPVGLRYSLN WFWDHYQLPLFIVENGFGAIDVQESDGTVNDQYRIDYLSAHIREMRKAVVEDGVDLMGYT PWGCIDLVSAGTGEMKKRYGFIFVDKDNEGNGTLNRSKKKSFDWYKQVIASNGEQL >gi|333596725|gb|GL892087.1| GENE 1020 1138530 - 1139567 1240 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 345 7 356 356 482 68 1e-134 MTNKTSLSYKDAGVDIDAGNALVDRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVL VSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTAA SVINGIAEGCLQSGCALVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVADGDV LVALASSGPHSNGYSLVRKILEVSGSDPLTTELDGKPLADHLLAPTRIYVKNVLDLIENV DVHAIAHLTGGGFWENIPRVLPDNTQAVIDASSWQWPSVFNWLQTAGNVSDHEMYRTFNC GVGMVIALPASEADKAVKLLTEKGENAWKIGTIKASDSEQRVVIE >gi|333596725|gb|GL892087.1| GENE 1021 1139564 - 1140205 828 213 aa, chain + ## HITS:1 COG:purN KEGG:ns NR:ns ## COG: purN COG0299 # Protein_GI_number: 16130425 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Escherichia coli K12 # 3 213 2 212 212 370 84.0 1e-103 MKNIVVLISGNGSNLQAIIDACKQKKINGTIRAVFSNKADAFGLERAREANIPAHALEAS QFAGREAFDRELVQEIDAYAPDVVVLAGYMRILSPAFVAHYAGRLLNIHPSLLPKYPGLH THRQVLENGDEEHGTSVHFVTDELDGGPVILQAKVPVFDGDNEDDVTERVQTQEHAIYPL VVSWFVDGRLEMRNGAAWLDGVKLPPQGYAAEE >gi|333596725|gb|GL892087.1| GENE 1022 1140189 - 1140428 93 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPKSSLFKLPGGALLAQACGPVGHGKRSATPSPNPLKSPTKKITVILFWHCWTYRGNAR HNKDETDLPRPVIELECEL >gi|333596725|gb|GL892087.1| GENE 1023 1140428 - 1142488 2648 686 aa, chain + ## HITS:1 COG:ECs3363 KEGG:ns NR:ns ## COG: ECs3363 COG0855 # Protein_GI_number: 15832617 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Escherichia coli O157:H7 # 1 686 1 688 688 1274 93.0 0 MGQEKLYIEKELSWLAFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR IIISEEQGLNSHSRHLLGKIQSRVMKADQEFDGLYNELLLEMARNQIFLINERQLSANQQ NWLRHYFKHYLRQHITPILINRETDLVQFLKDDYTYLAVEIIRGETINYALLEIPSDKVP RFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME ASLMELMSSSLKQRLTAEPVRFVYQRDMPDAMVEMLRDKLTISRYDSIIPGGRYHNFKDF IGFPNVGKANLVNKPLPRLRHIWFDKFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASF DPNVLAIKINIYRVAKDSRIIDAMIHAAHNGKKVTVVVELQARFDEEANIHWARRLTEAG VHVIFSAPGLKIHAKLFLISRKEGDDVVRYAHIGTGNFNEKTARIYTDYSLLTADARITN EVRRVFNFIENPYRPVSFDYLLVSPQNSRRLLYDMIDKEIANAQNGLSSGITLKLNNLVD KGLVDRLYAASSSGVPVNLLIRGMCSLIPELEGISDNIRVISIVDRYLEHDRVYIFDNAG DKRVYLSSADWMTRNIDYRIEVAAPLLDPRLKQRILDIIEILFSDTVKARYIDKELSNRY VPRGNRRKVRSQLAIYDYIKSLEQPD >gi|333596725|gb|GL892087.1| GENE 1024 1142492 - 1144030 2003 512 aa, chain + ## HITS:1 COG:STM2502 KEGG:ns NR:ns ## COG: STM2502 COG0248 # Protein_GI_number: 16765822 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Salmonella typhimurium LT2 # 1 512 1 512 513 914 89.0 0 MPINDNTPRPQEFAAVDLGSNSFHMVIAREVDGAMQIIGRLKQRVHLADGLDARNMLSEE AMERGLNCLSLFAERLQGFSPSSVCIVGTHTLRQALNAPEFLKRAEKVIPYPIEIISGNE EARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEPRLVESRRMGCVSFAQMYFPGG VITRENFQRARMAAVQKLENLAWQYRIQGWNVALGASGSIKAAHEVLLAMGEKDGFITPE RLVKLTEEVLKHKSFDALSLPGLSDERKAVFVPGLAILCGVFDALAIKELRLSDGALREG VLYEMEGRFRHQDIRSRTAQSLANQYNIDREQAKRVLETTVQMYEQWEEQNPKLAHPQLA ALLKWAAMLHEVGLNINHSGMHRHSAYILQNSDLPGFNQEQQTMMATLVRYHRKAIKLDD LPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLKLKTDDYHWTLSFPHDWFSQNA LVLLDLEKEQQYWESVTGWLLKIEEESEEAAA >gi|333596725|gb|GL892087.1| GENE 1025 1144035 - 1146275 2087 746 aa, chain - ## HITS:1 COG:yfgF_3 KEGG:ns NR:ns ## COG: yfgF_3 COG2200 # Protein_GI_number: 16130428 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 476 746 1 272 272 385 69.0 1e-106 MNIHHFLKQNKDRWWALPLILPVVLLPVLSAANTLTQMGDGIVALYYLPLSFLLTLMLFF GVEALPGVVVSLFLRYYPSVGLFETLAGILHFIVPLVLSWGGYRVFAPRRNMTAYGDGRL MGQRIFWQVFCPATLFLVLFQFAVYLGIYESRQSLAGLNPLNIRTLINYQGLLVSGLTGV PLSYLLIRLIRHPRYIKGLMSQLRAQIDKKVTAVEFVVWFLALGGLLVMLLLPMNANSSI FSINYTLSLLMPVMLWGAMRFGYKLMSLIWTPVLLVSIHFFYHYIPVQEGYGIQLAITSS SYLVFSFVVTYMSMLATRQRAINIRSRRQAFLDPVVHMPNLRALSRELASNPWSALCLLR VPELEVLGRNYGVMLRIQYKQQLAQWINGTLQPNERVYHLTGYDMAVRLEAESHQQRIET LDEHIKQFVFFWDGMPVQPQVGISYCYVRSPVNHLYLVLGELGIVADLSLSTNHPENLQQ RGAVHLQRSLKDKVAMMSRLQTALEQNAFTLLVQPVRGLRGDCYHEVLLRMRDDNGALIF PEQFLPVAQEFGLSSRVDLWVLERTLSFLAQHRQRLPGQRFAINLASSTVYRAQFPLEVS RLLAKYAVEAWQLIFEVTESSAFGHADLAASTLRKLQKMGIRIAIDDFGTGYASYARLKS VDADILKIDGGFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVETEEIRSAVLALGID YVQGYLIGLPVELDTLLDAQPSQESA >gi|333596725|gb|GL892087.1| GENE 1026 1146539 - 1146757 63 72 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2789 NR:ns ## KEGG: EC55989_2789 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 72 9 82 96 79 54.0 6e-14 MVIPGANGGINKAAKEKQKTDEQYDAGHPGVKSMSFSHTRSLTHFLFLSIPFWAMRLLRH SRKSGSIRRNVK >gi|333596725|gb|GL892087.1| GENE 1027 1146674 - 1146814 78 46 aa, chain + ## HITS:1 COG:no KEGG:ECL_03796 NR:ns ## KEGG: ECL_03796 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 46 1 46 46 77 93.0 1e-13 MTRIILLISFLFFFGRFVYSSIGAWYHHQDKIQSQQTGLVVDASER >gi|333596725|gb|GL892087.1| GENE 1028 1146846 - 1147571 256 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 4 237 3 238 242 103 31 4e-20 MTHEKVALIFGGARGIGAAIAVRLAREGYRVAVTWVSRPDRADVLVSSITDAGGQALAIN ADSADAVAIQAAVDATIAHYGRLDVAVVNAGVLRLGTLEDYRLEDLDATLSVNVRGVFLS IQAAVKSMVEGGRVITIGSNTAVRTGHAGSSVYAMSKAAVAAMVQNLALDLAPKRITINN IQPGPVATDMTAGMAEQITAHIPLQRIGQPDEIASLAAWLAGEESGYMTGASLTIDGGFV L >gi|333596725|gb|GL892087.1| GENE 1029 1147784 - 1148245 521 153 aa, chain + ## HITS:1 COG:no KEGG:ECL_03798 NR:ns ## KEGG: ECL_03798 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 153 1 153 153 231 92.0 7e-60 MIRRHFLLPLLAMTSTVCAAPLSGLSAADVNGPAAVAPLEKPQPPAKLIVDPPLAGPLSK GAVFIQYRAENLRIEPVFGPDALKVTPRIGHIHVVVDDAPWHWAETSGEPVILVGLPAGK HKVTIILADPTHKPIDHKTVEFTVPPHAAVHHF >gi|333596725|gb|GL892087.1| GENE 1030 1148255 - 1149001 570 248 aa, chain + ## HITS:1 COG:XFa0032 KEGG:ns NR:ns ## COG: XFa0032 COG0596 # Protein_GI_number: 10956743 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Xylella fastidiosa 9a5c # 1 245 1 245 251 204 48.0 2e-52 MKALSVFTAALLAISTSALAETKTSVVLVHGAFADGSSWNKVITRLQKHHTEVIAVQLPL TSLKDDVAATQRAIARAHGDVVLVGHSWGGTVISEAGNNARVKSLVYVAAFAPDSGQSTA ALADSYPAPPGSASLAKTAEGYLYLPSKAVGENFAPDVKDAERNVIAATQGPIKADAFGE KVTHAAWHDKPSWYVVSKNDRMINPELERAMAKKINANTTEVAASHVSMVSQPDIVTHTI EQALSGQQ >gi|333596725|gb|GL892087.1| GENE 1031 1149131 - 1149967 609 278 aa, chain - ## HITS:1 COG:RSc3065 KEGG:ns NR:ns ## COG: RSc3065 COG3713 # Protein_GI_number: 17547784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Ralstonia solanacearum # 12 278 2 261 261 146 38.0 3e-35 MRNITPRHSFPRSRIGRSMKSILPGAVLALLAAPALAAEQPQGNVLTLGGGVDVAPRYSG SDKSRVSAAQVVDYAMANGFFVSTTRGIGYGNSFGKLDYNAALSYRAGRKDRDVSSDSIS SGSDNLRGMGDIKGSAIVVPGLGYRVTDWLTVQLQAEVPVSERDNGEAVHFGIASPLYTS PKNALTLALTGSWGSSKYVQTYYGVNAAQSAASGFARHDAGSGIYAYSLNLDWTHKLTSR WSLLAAAGVTQLTGEAGDSPIVQRKTSPVGSLKVTYSF >gi|333596725|gb|GL892087.1| GENE 1032 1150171 - 1150848 377 225 aa, chain + ## HITS:1 COG:HI1708 KEGG:ns NR:ns ## COG: HI1708 COG0745 # Protein_GI_number: 16273595 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Haemophilus influenzae # 1 218 1 219 221 184 46.0 2e-46 MKILLIEDDLDLGNGVRIALADQGFDVIWVRRKEDALHQLELCVPELILLDLGLPDGDGM SLMTRLRQQLKSVPVIILTARGTLQDRLCGLDAGADDYLVKPFVLAELLARVRALARRSY GFENEAIEIRGLSLHIPTRRVTVSARHVELTASEYALLETLMLRADRVLTRRYLEERIFG TKENLSNALDVHMGNLRRKIGDGFVRTVRGVGYVIDTVPVQKAAG >gi|333596725|gb|GL892087.1| GENE 1033 1150959 - 1152236 898 425 aa, chain + ## HITS:1 COG:RSc3403 KEGG:ns NR:ns ## COG: RSc3403 COG0642 # Protein_GI_number: 17548120 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 127 420 148 443 446 165 34.0 1e-40 MEDLRSPPILTGSETYETLFSLVESMDDRPQARNAVLTTFSKALREGYGGGEDPELSINL IVRKNNEIIFSSDGAPTGVKNSRLGVMQHVQSEDHTWTSRTLKSAHSDVEVTLFTPAGSW NFFIYLNSRGYYVMPLMICIPFLLFPAWLSIRIAMRPWNKVVDEISLRTPDDLSPLKAIP RHRELRQTVDAINDFLARVRESAERERMFIADAAHELRTPLAAMRINVEALQSWVISESQ QELLAGIVRSNSRAARLVNQLLLMMHSEAHISTVMSPVPLTTLIQERMAALEPLASGRRI EFEFIADDEIHIAGIRERLVSLIDNLIENAVKYSPEGGRIEVQLQSRDKSAQLRVSDAGP GIPVELRERVFDRFFRDPNQTQSGSGLGLAIVKAVTQQHNGRVNLSTSAEGGLMVTVDFP NPAFA >gi|333596725|gb|GL892087.1| GENE 1034 1152404 - 1152883 484 159 aa, chain + ## HITS:1 COG:RSp0526 KEGG:ns NR:ns ## COG: RSp0526 COG1959 # Protein_GI_number: 17548747 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Ralstonia solanacearum # 5 140 6 138 143 57 30.0 1e-08 MLDYRFPTALQMVLSVAMAEQSGERSTSAILAYGLEANPSFIRKLMVPLARDGIIVSTLG RNGSIHLGRPAEEITLRDIYLSVTEDKKLWASRPDVPARCVVSANACWYFKSIADEAEQA SLAVLARHTVASALEEVKKADTSGCDPVPEICSQHKKTS >gi|333596725|gb|GL892087.1| GENE 1035 1152951 - 1156103 3937 1050 aa, chain - ## HITS:1 COG:PA2494 KEGG:ns NR:ns ## COG: PA2494 COG0841 # Protein_GI_number: 15597690 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 1 1045 1 1050 1062 1154 60.0 0 MDFSRFFIDRPIFAAVLSILIFITGLIAIPLLPVSEYPDVVPPSVQVRAEYPGANPKVIA ETVATPLEEAINGVENMMYMKSVAGSDGVLVTTVTFRPGTDPDQAQVQVQNRVAQAEARL PEDVRRLGITTQKQSPTLTLVVHLFSPNGKYDSLYMRNYATLKVKDELARLPGVGQIQIF GSGEYAMRVWLDPNKVAARGLTASDVVTAMQEQNVQVSAGQLGAEPLPKESDFLISINAQ GRLHTEDEFGNIVLKTTEDGTVVRLRDVARIEMGSGSYALRSQLNNKDAVGIGIFQSPGA NAIDLSNAVRAKMDELSTRFPDDMKWAAPYDPTVFVRDSIRAVVQTLLEAVVLVVLVVIL FLQTWRASIIPLIAVPVSVVGTFSILYLLGFSLNTLSLFGLVLAIGIVVDDAIVVVENVE RNIEEGLAPLAAAHQAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVTIAIST VISAINSLTLSPALAALLLKPHGAPKDLPTRLIDRLFGWIFRPFNRFFHRSSTGYQGLVG KTLGRRGAVFAVYLLLLCAAGVMFKAVPGGFIPTQDKLYLIGGVKMPEGSSLARTDAVIR KMSEIGMNTEGVDYAVAFPGLNALQFTNTPNTGTVFFGLKPFDQRKHTAAEINAEINAKI AQIQQGFGFSILPPPILGLGQGSGYSLYIQDRAGLGYGALQNAVNTMSGAIMQTPGMHFP ISTYQANVPQLDVQVDRDKAKAQGVSLTDLFGTLQTYLGSSYVNDFNQFGRTWRVMAQAD GQFRDSVEDIANLRTRNNQGEMVPIGSMVTISTTYGPDPVIRYNGYPAADLIGDADPRVL SSAQAMTQLDAMSKQILPNGMNIEWTDLSFQQATQGNTALIVFPVAVLLAFLVLAALYES WTLPLAVILIVPMTMLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARELEI QGKGIMDAALEACRLRLRPIVMTSIAFIAGTIPLILGHGAGAEVRGVTGITVFSGMLGVT LFGLFLTPVFYVTLRKFVTRGKAAKEVLPA >gi|333596725|gb|GL892087.1| GENE 1036 1156127 - 1157302 1068 391 aa, chain - ## HITS:1 COG:PA2493 KEGG:ns NR:ns ## COG: PA2493 COG0845 # Protein_GI_number: 15597689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 22 390 19 382 414 296 46.0 3e-80 MSLQKTWGYFHLSTMGVVLLSVLLVGCDDSVAQNAAPQAPVVSAADVVVKSISQWDSFNG RIEAVESVQLRPRVSGYIEKVNYTDGQEVKKGEVLFTIDDRTYRAALEQAQANLARAKTQ ASLARSEASRTDKLVNTNVVSREEWEQRRSAATQAQADIRAAQAAVDAAQLNLDFTKVTA PIDGRASRALITSGNLVTAGDSASVLTTLVSQKTVYVYFDVDESTYLHYQNLARSGQGAS SNHTALPVEIGLTGEEGYPHQGKVDFLDNQLTPSTGTIRMRALLDNAQRQFTPGLFARVR LPGSAEFKATLVDDKAVLTDQDRKYVYVVDKDGKAQRRDITPGRLADGLRIVQQGLNPGD KVIVDGLQKVFMPGMPVNAKSVAMTASAALN >gi|333596725|gb|GL892087.1| GENE 1037 1157640 - 1157993 332 117 aa, chain + ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 106 1 106 289 113 48.0 7e-26 MNTGAFIHDLLDWIDNNLDSRLDIETVSRRAGYSKWHLQRIFKEHTGSPLAEYIRAQKLQ KSVERLAQSDEPILNVAIALGFDSQQSFNRSFKRQYGQAPGAWRRSIGCRGSRQMSQ >gi|333596725|gb|GL892087.1| GENE 1038 1158118 - 1158441 228 107 aa, chain - ## HITS:1 COG:no KEGG:SeAg_B2655 NR:ns ## KEGG: SeAg_B2655 # Name: not_defined # Def: SEC-C motif domain-containing protein # Organism: S.enterica_Agona # Pathway: not_defined # 49 99 700 750 792 90 84.0 2e-17 MSEAAFADIPYAQLPGATVLQEIYYKDPDSKQWSENDTLILLDDVLLLVEARATNVIGVV AEVSVDGTYVQARSFKTYTPTEHTVENAHIYEDAAKMANLLSDCYLD >gi|333596725|gb|GL892087.1| GENE 1039 1158727 - 1159044 182 105 aa, chain - ## HITS:1 COG:no KEGG:SC2506 NR:ns ## KEGG: SC2506 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 93 32 124 792 170 88.0 2e-41 MESIADRMRELIVKMPPHDLLGYIYAQHMMKTMGNQIGGEKQGQEDGPDDMVNENQFLLA YVQAVLASDAAPADMEFNEALCAELFELSRKLRAQSHALCYVHLC >gi|333596725|gb|GL892087.1| GENE 1040 1159526 - 1160041 3 171 aa, chain + ## HITS:1 COG:no KEGG:BC1002_2981 NR:ns ## KEGG: BC1002_2981 # Name: not_defined # Def: hypothetical protein # Organism: Burkholderia_CCGE1002 # Pathway: not_defined # 1 171 1 172 172 183 51.0 2e-45 MTLHGKFIINDADYSPLAFDGIGVFMAFSGNGAYRNKGACGIIPNVGPLPKGKYYIVDRP KGSIANRFRAWGVDTYKSIFSYHVDHSEWFALFRDDGNVDDTTFYESIARGGFRLHPGQV SEGCITLPSQSDYNRLRDALLRTKKEKIKGIDLETYGTIEVIIGGYQKTCP >gi|333596725|gb|GL892087.1| GENE 1041 1160293 - 1160784 240 163 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 199 60.0 1e-51 MPIPPYLWLKDDGGADIKGSVDVQDREGSIEVISMGHGVNLPVDTANGKITGTRQHSSFN FEKEVDSSSPYLYKAAATGQTLKSAEIKFYHINDAGQEVCYYTILMENVKITGVNCGVPN VKLSGNDKLNHMESVSMQYEKITWRIVDGNIQFSDSWYERQTA >gi|333596725|gb|GL892087.1| GENE 1042 1160935 - 1162512 2191 525 aa, chain - ## HITS:1 COG:STM2510_2 KEGG:ns NR:ns ## COG: STM2510_2 COG0519 # Protein_GI_number: 16765830 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Salmonella typhimurium LT2 # 207 525 1 319 319 640 96.0 0 MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIREFNPSGIILSGGP ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEGSNEREFGYAQVEVVTDSA LVRGIEDSLTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQF HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVERIRQQVGDDKVILGLSGGVDS SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAQQVMDMFGDHFGLNIVHVEGEQRFLDALKG ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKMGLVEPLRELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELHKADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|333596725|gb|GL892087.1| GENE 1043 1162579 - 1164045 1875 488 aa, chain - ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 479 94.0 1e-135 MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQAEEVRRVKKHESGIVSDPQTVLPTTTLHEVKALTERNGFAG YPVVTEDNELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGETRDVVLAKMHEKRV EKALVVDANFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERVDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIG PGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGAAAVMV GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGR VAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDLLRTKAEFVRISGAGIQESHVHDVTITKE SPNYRLGS >gi|333596725|gb|GL892087.1| GENE 1044 1164204 - 1165577 1250 457 aa, chain + ## HITS:1 COG:xseA KEGG:ns NR:ns ## COG: xseA COG1570 # Protein_GI_number: 16130434 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Escherichia coli K12 # 1 454 1 454 456 746 88.0 0 MLSSQSPSIYTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAM LSAEGLFDQQFKKPLPSPAHCVGIITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD APWQIVRAIELANARQECDVLIVGRGGGSLEDLWSFNDERVARAIFASVIPVVSAVGHET DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQIQNGQQRLEMAMDYFLANRTRRFTQLH HRLQQQHPQLRLARQQTVLERLRQRMNFAMDTQLKRAVSRQQRVTQRLNQQNPQPTIYRA QTRIQQLEYRLAENIRSRLSTTRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQT KQVKAGDVLTTRLSDGWVESEVKEIKPVKKTRQRKSG >gi|333596725|gb|GL892087.1| GENE 1045 1165636 - 1166655 1241 339 aa, chain + ## HITS:1 COG:all0983 KEGG:ns NR:ns ## COG: all0983 COG3227 # Protein_GI_number: 17228478 # Func_class: E Amino acid transport and metabolism # Function: Zinc metalloprotease (elastase) # Organism: Nostoc sp. PCC 7120 # 7 339 26 359 360 353 54.0 2e-97 MPHLHSVIPPYILRRIIESGSEPQQRCARQTLTHVQTLMAHMPGKPAAPHVNKAGQLERD IYDAKQTQELPGTQVRYEGQPSNGDVAVDEAYDYLGITHDFFWKEYQRDSLDNKGLILTG TVHYGREYQNAFWNGQQMVFGDGDGEIFNRFTIAIDVVAHELSHGVTETEAGLIYFEQSG ALNESLSDVFGSLVKQYHLKQTADRADWLIGEGLLAAGINGKGLRSMSEPGTAYDDPLLG KDPQPAHMKDFIKTREDNGGVHLNSGIPNRAFYLAATAIGGYAWEKAGYAWYDTVCDRNL AQDADFDAFAKLTIAHGEKRSGGDVGAAIKQAWEQVGVL >gi|333596725|gb|GL892087.1| GENE 1046 1166655 - 1167005 452 116 aa, chain + ## HITS:1 COG:no KEGG:ECL_03849 NR:ns ## KEGG: ECL_03849 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 116 1 116 116 199 90.0 4e-50 MQVPELTDDAVVELAREGGVAFIPKLSGQRTIALSSLNEAQRQRLVSILEQAFPRGQPPG QASSPGSGDQRYFRIQIIWTGQNQAHYADIIVLVPEQEAPESLVELWQKGEGCVCD >gi|333596725|gb|GL892087.1| GENE 1047 1167002 - 1167223 257 73 aa, chain - ## HITS:1 COG:no KEGG:Entcl_1249 NR:ns ## KEGG: Entcl_1249 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 69 1 69 71 108 84.0 7e-23 MTITCPDCQAPLEPLNGVAHCENCNKDITLDALCPECHQPLQVLKACGAVDYFCQNGHGL ISKKRVEFVRAEG >gi|333596725|gb|GL892087.1| GENE 1048 1167274 - 1168308 917 344 aa, chain - ## HITS:1 COG:no KEGG:Entcl_1248 NR:ns ## KEGG: Entcl_1248 # Name: not_defined # Def: oxidoreductase domain-containing protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 344 1 344 344 552 79.0 1e-156 MQLGFVGLGAVVETAYLPALRNLFKHPVRCFGFDVLPTKHPEGITRCASLAALLATPLDT LFITTASLQHLEVLEQAIASPVPRIVIEKPIVATLPQIEKLNALLATPGVASRVLALDHW MARIETVKQSLVGHYSDIARIEGFLQEPSGYNAAGEPIALNFATGEPDTRTLRHPDGVIL DIGTHVLAMLRETVRYLGGHDDMALQVVTAKDRLGRDIARGDLTTAEGEAHLQGRISGVP VDIRLNKYAGPAGGQKGLRLYLRDGRIISHDRRGAEDVLELIEGKDIQRWHIPGTIYEHC LADHILGAKSLFERDPHEVSRTTRRRIEEVTLLLTLQQQLRGPH >gi|333596725|gb|GL892087.1| GENE 1049 1168367 - 1169911 2236 514 aa, chain - ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 5 454 1 443 492 275 38.0 2e-73 MQSSVNQKESRTFFGHPYPLGSLFFTEMWERFSFYGIRPLLILFMAATVYDGGMGLAREN ASAIVGIFAGTMYLAALPGGWLADNWLGQQRAVWYGSILIALGHLSIALSAIMGDNLFFI GLMFIVLGSGLFKTCISVMVGTLYKKGDARRDGGFSLFYMGINMGSFIAPLISGWLIKTH GWHWGFGIGGIGMLVALIIFRVFAVPAMKRYDSEVGLDSTWNSPVVKRNGVGAWLLALAV GVAIIVTLIAQGVIVINPVAVASVLVYVIAASVALYFIYLFIFAGLNRKERARLLVCFIL LVSAAFFWSAFEQKPTSFNLFANDYTNRMIGDFEIPAVWFQSINALFIILLAPVFSWAWP KLASKNIRPSSITKFVIGILCAAAGFGLMMLAAQNVLSNGGAGVSPFWLVGSILMLTLGE LCLSPIGLATMTLLAPERMRGQMMGLWFCASALGNLAAGLIGGHVKADQLDMLPDLFARC SIALLICAAVLIVLIVPVRRMLENAQTKPAANAS >gi|333596725|gb|GL892087.1| GENE 1050 1170250 - 1170711 401 153 aa, chain - ## HITS:1 COG:no KEGG:ASA_2549 NR:ns ## KEGG: ASA_2549 # Name: not_defined # Def: hypothetical protein # Organism: A.salmonicida # Pathway: not_defined # 9 148 7 152 155 92 41.0 8e-18 MKHYIIAALTASTLIAFTAGPAYAISATYRTQLERSGCNMTNESKGCDIHKTRAENEAAG FSDRGVTPTTRADIKKYDGDYVARHPNGQRVANIHIGAGTVRIAGKSVKATVSGDMLIIN GSKTLTYVIYPNKGSFWEDTDSGNRGPIERVYF >gi|333596725|gb|GL892087.1| GENE 1051 1170768 - 1171766 797 332 aa, chain - ## HITS:1 COG:nmpC KEGG:ns NR:ns ## COG: nmpC COG3203 # Protein_GI_number: 16128536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 323 21 366 375 272 51.0 7e-73 MKKTVVALAVLALGITSAYAAEIYNKDGNKLDLYGKVKAAHSWSDGEDGDGTYARLGFRG ETQINDKLTGYGQFEGQFDAAQAEGAQDGVSTRLAFAGLDFDHNLSFDYGRNYGVAYDVG AYTDVLSEFGGDSYEGTNSFLTGRASGVATLRTGNAFGLADGVQFAAQYQGQDDTNSNPA KQHGTGYGFSLGYDLANTGVSAIAAYSTSAITADQKRSGWDGKNAEFWGTGLKYDANRVY VATIYGESHNLLQDADEAKHFEAIAAYVFDVGLRPNVAYVHARDNANRDIVEYVALGSDY YFNKNLVADVGYKIDLADGGDNTLVAGLTYQF >gi|333596725|gb|GL892087.1| GENE 1052 1171994 - 1174633 1497 879 aa, chain - ## HITS:1 COG:ECs0548 KEGG:ns NR:ns ## COG: ECs0548 COG5295 # Protein_GI_number: 15829802 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 673 875 133 334 338 75 33.0 4e-13 MKKTIIAGVVVSALTASSAFAIEGGLASQNGFPAALEEIKTALNDPNGAQFARAQDVAMR RLGLNFNDAEVFVSAVRSGKDVSHFGEPAVPPAPTYVAPVAVPHATPTAVPVAVPPALVK APTLHPQATPALPVAEPAIQKVPVKRPQATPALPQAEPSILTAPTKQAQATPELQLTPAF QKAPTLKPQATPKLDLTPAVQKAPTLRPQATPTLPQATPEFQKVPTLHPQAAPKLILTPA VQKTPTLHPQANPAQPQQTPAIHVPAATAPAKTFDHASDKWKTINHSLNQLIATGADRND PTFKAIVKDLSAQRNQARQEMLGLASPEQLAKVPPVTRAPELHPQPTKATPVLAGKTPSI QKAPVKQAQATPALPQATPEIQKVPELHPQATPAAPTLRLVSTHHREKGAMEPVFTSSVT VPNDTDAQGIQLHASAPVIAATKTAVVYKAADVTSSASTPSLPAVTAPGQSIYDLKQDQR LNDHDAALADKVATSTYTAEMANKADKSALGDKLDVTRYEGEQRQQDFEIADANRDSTLA LQTGKKALGETTVLHNEVDIHTKALTRLAIDKANQTDLTKEMTRATGVEAGHETRITTLE NAPKPQDGKDGTNGKDGINGKDGATGPAGKDGKDGLNGTNGKDGATGPAGRDGKDGLNGT NGKDGKDVDPAVAKQVATNTTAIDTNDAHAQTLAKGELTIGKLAVQNHQQIATNQHALTR QAQNFTALQTAVTQAQDTGTYAHARIDDANKHIAANRQALADTNKRVADNSKKLANHEAR IQDLESNNQTNFNKLQSQQNKDRKEFRAGVAGAVALTQIPQVQADQSGSFGMAVGTFNGE NAIAAGVSSRLSGAVTVKSGLSWDTQGNVGAGAGVSVGW >gi|333596725|gb|GL892087.1| GENE 1053 1174739 - 1174945 143 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKHSICEQERLIGKAGEVQREDCISALRIRQKVVHQTQHSIQDILSEALELFGAKYTLP LATRKLLR >gi|333596725|gb|GL892087.1| GENE 1054 1175666 - 1177138 1958 490 aa, chain - ## HITS:1 COG:STM2519 KEGG:ns NR:ns ## COG: STM2519 COG1160 # Protein_GI_number: 16765839 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 490 1 490 490 916 93.0 0 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSREKPTFLVANKT DGIDADQAVADFWSLGLGDIYPIAASHGRGVTSLLETVLLPWVDEVNPPEEVDEDAEYWA QFEAGEEGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS IYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVLLVIDAREGISD QDLSLLGFILNSGRSLVIVVNKWDGLSNDVREQVKETLDFRLGFIDFARVHFISALHGSG VGNLFESVREAYDSSTRRQSTAMLTRIMNMAAEDHQPPLVRGRRVKLKYAHAGGYNPPIV VIHGNQVKDLPDSYKRYLMNYFRKSLDVMGTPIRIQFKEGENPFANKRNTLTPNQMRKRK RLIKHIKKSK >gi|333596725|gb|GL892087.1| GENE 1055 1177251 - 1178429 1295 392 aa, chain - ## HITS:1 COG:yfgL KEGG:ns NR:ns ## COG: yfgL COG1520 # Protein_GI_number: 16130437 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Escherichia coli K12 # 13 392 13 392 392 657 87.0 0 MQLRKLLLPGLLSVTLLSGCSLFSGEEDVVKMSPLPTVENQFTPSTAWDTSVGDGIGDFY SNLHPAYADGVVYAADRKGTVKALNADDGKEVWSINLAEKDGWFSRKPALLSGGLTVAGG HVYVGSEKAQVYALNASDGSVAWQTTVAGESLSRPVVSDGMVLIHTSNGQLQALNEADGL VKWTVNLDMPALSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGSTE IDRLSDVDTTPVIVDGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYMVD QNDRLLALSTEGGVTLWTQSDLLHRLLTAPALYNGSLVVGDSEGYMHWIDPENGRFVAQQ KVDSSGFLTEPVVADGKLLIQAKDGTLYAITR >gi|333596725|gb|GL892087.1| GENE 1056 1178440 - 1179111 725 223 aa, chain - ## HITS:1 COG:yfgM KEGG:ns NR:ns ## COG: yfgM COG2976 # Protein_GI_number: 16130438 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 18 223 1 206 206 286 78.0 2e-77 MALRRTCALYWAKEKDCVEIYENEHDQVDAVKRFFVENGKALVVGVILGVGALVGWRYWN NHQADSARGSSLNYENTVSAIRADQPQTLTAAEKFAADNKNTYGALAALEVAQQYVDKNE LDKAAAQLTQGLAAASDENLKAVINLRLARIQVQQKKADDALKTLDTIKGEGFAAIVADL RGEALLSKGDKAGARKAWQAGVDSKASPALSEMMQMKINNLSV >gi|333596725|gb|GL892087.1| GENE 1057 1179074 - 1180318 1457 414 aa, chain - ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 414 11 424 424 798 94.0 0 MNDYLPGETAIWQRIEGTLKQVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF EDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFNQLGV EVFGLQGPDIDAELIMLTARWWRALGISEHVSLELNSIGSLEARANYRDALVAFLEQHKE KLDEDCKRRMYSNPLRVLDSKNPDVQALLNDAPALGDYLDEDSREHFTGLCKLLEAAGIA YTVNQRLVRGLDYYNRTVFEWVTTSLGSQGTVCAGGRYDGLVEQLGGRAAPAVGFAMGLE RLVLLVQAVNPEFKADPVVDIYLVASGAETQSAAMQLAERVRDALPDVKLMTNHGGGNFK KQFARADKWGASIALVLGESEVANGEVVVKDLRSGEQTTVTQDGVAAHLRTLLG >gi|333596725|gb|GL892087.1| GENE 1058 1180430 - 1181548 1031 372 aa, chain - ## HITS:1 COG:ECs3377 KEGG:ns NR:ns ## COG: ECs3377 COG0821 # Protein_GI_number: 15832631 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 692 96.0 0 MHNQAPIQRRKSKRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR VSVPTMDAAEAFRLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV KASDVFLAVESYRLLAKQIEQPLHLGITEAGGLRSGSVKSAIGLGLLLSEGIGDTLRVSL AADPVEEIKVGFDILKSLRIRARGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNSDMIDQLEARIRAKATMMD EAQRISVQQVEK >gi|333596725|gb|GL892087.1| GENE 1059 1181575 - 1182576 736 333 aa, chain - ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 333 1 337 337 442 76.0 1e-124 MNTEATHDQNAALSTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF LRGYIRSYAKLVHIPEEELLPMMEKQAPVRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLV LFVVVGLTGAWWWQNHKAQQEEITTMADQSSAELNQSGNNGAQSVPLSTEGAATSSEPQA SAPATEPSTAPESTANTTPATQAQDQNAVVSPSQANVDAAPAATAPADNTAASLPTDPAG TAAPAVDPNALVMNFTADCWLEVTDATGKKLFSGLQRKDGTLNLTGQAPYKLKIGAPAAV QIQYQGKPVDLSRFIRTNQVARLTVNAEQSAAQ >gi|333596725|gb|GL892087.1| GENE 1060 1182868 - 1184034 1435 388 aa, chain - ## HITS:1 COG:STM2525 KEGG:ns NR:ns ## COG: STM2525 COG0820 # Protein_GI_number: 16765845 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Salmonella typhimurium LT2 # 1 388 1 388 388 746 93.0 0 MSELVNTSEVAIPAVPNKNGKINLLDLNRQQMREFFKEMGEKPFRADQVMKWMYHYCSDN FDDMTDINKVLRNKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRAT LCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGTRPITNVVMM GMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHA PNDAIRDEIVPINKKYNIETFLAGVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHELA ELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMEYGFTTIVRKTRGDDIDAACG QLAGDVIDRTKRTLRKRMQGESIAVKTV >gi|333596725|gb|GL892087.1| GENE 1061 1184182 - 1184613 461 143 aa, chain - ## HITS:1 COG:ECs3380 KEGG:ns NR:ns ## COG: ECs3380 COG0105 # Protein_GI_number: 15832634 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 263 94.0 6e-71 MAIERTFSIIKPNAVAKNVIGSIFARFESAGFKIVGTKMLHLTVEQARGFYAEHEGRPFF DGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPDNALAGTLRADYADSFTENGTHGSD SVESAAREIAFFFAEGEVCPRTR >gi|333596725|gb|GL892087.1| GENE 1062 1184738 - 1185613 155 291 aa, chain - ## HITS:1 COG:STM2527 KEGG:ns NR:ns ## COG: STM2527 COG1145 # Protein_GI_number: 16765847 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 286 1 286 287 287 54.0 2e-77 MGGLTFAPAMDVTHACVRRRFRHISCCACADACPVQAFSFTDSGVSVDESRCIECGDCLF VCPTEAITGIAPRKRFLRGDTLVGPFTEHAPGVNELLLWHAQYHVRFISIDAEQYPDWLL AIARLNLALRRRGEAAWAFKHIPVNEVNIARRALMHVPREDVRACSVVPGQRELRGAFSA FSEAEITLNADSCVLCGACWRSCTENSIRFENAELVLETGRCTGCGGCEAVCQHAAIKVT QTEGTAKRVVIPAYEAVCLTCHRHFWSFSSDEKQCPLCFHHQYGMRNPACC >gi|333596725|gb|GL892087.1| GENE 1063 1185613 - 1186392 867 259 aa, chain - ## HITS:1 COG:STM2528 KEGG:ns NR:ns ## COG: STM2528 COG3302 # Protein_GI_number: 16765848 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Salmonella typhimurium LT2 # 1 259 1 269 269 293 68.0 2e-79 MHELPLLIFTLFLQGSVGVTLWLAFGSTQRSALLPAAGAFVLASLGLLASALHMGYPLNA LNALRHVSSSWLSREIIFASLYLAALGLATLLMFVKKPGWKPLLVVAGLVGLVDVFCMAQ IYMHASVVTWQHVNTLVLFIGSVGIIGSACMAVGTRSQTTVRAAVVIITLLVLVRLVMQP VWLADITAMDNTVVTFPHAPLQMLEQLRTVHLLSWCVSVAGMLCFAAGGLKAARATMLLG SALLIVGELMLRFVFFSIG >gi|333596725|gb|GL892087.1| GENE 1064 1186385 - 1187014 482 209 aa, chain - ## HITS:1 COG:STM2529 KEGG:ns NR:ns ## COG: STM2529 COG0437 # Protein_GI_number: 16765849 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 209 1 209 209 388 94.0 1e-108 MSQFKHYAPVSDKQLGFYIDSSRCSGCKACQVACKDKNNLEVGRRFRRVYEVNGGNFIPT GQGGVSNNVFAYTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTDKCVGCGYCAWS CPYGAPQLNEQTGQMSKCDFCVDLQAKGEQPVCVATCPLEAIKFGPIDELRAKYGAVCDV KGLPDSSITKPNLVIKAHQGAEKEGKRHA >gi|333596725|gb|GL892087.1| GENE 1065 1187011 - 1189389 2300 792 aa, chain - ## HITS:1 COG:STM2530 KEGG:ns NR:ns ## COG: STM2530 COG0243 # Protein_GI_number: 16765850 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 792 10 801 801 1494 90.0 0 MKKNKHQGEGIIPAISRRQFIQAGSALAALPFVVKTGNVQAQGTAVTDATPEEKVVQTCS TFDCGGKCDIRAHVSEGVVTRISTRPDNALDPQMPVMRACVRGRAYRKFVYHPDRLKYPM KRVGKRGEGKFERITWDEATTLIANQLKTITQKYGAASRYVHVGTAVSGGTFSGDKMVRR LLNLTGGYLESYHSVSMGNTAAATPYTYGTAASGSSMDTLLDTKLVILWGHNPTETIFGH SNHFYQKMKQNGTRFIVVDPRYSDTVSSLADQWIPLLPTTDNALMDAMMYVIVTENLHDR DFIQRYTLGFDEDAMPEGVPANESLMAYLTGAKDGVAKTPEWAEKITHVPAQAIRQLSRD YATTKPAALIQGWGPQRHNCGERTARGSTLLATLTGNVGVKGGWAAGYGGCANRKFAAGP EMPDNPVKAKISVMNWVQAADDASKVTAEDGLKDAEKLDSNIRILFSLAGNYLANQNPDL HQATRVLEDESKIEFIVASDLFMTPSARYADLLLPETSFMERWNIGETWGTASYLILSEK LIEPEFERRSDYDWLREVAAKLGVEPAFSEGRDEKAWIEHIWEQTRLSMPDENLPDFATL QKTRQHLFKSAPFVAFEDNIRDPQNHPFPTPSGKIEIFSKRLYDMHHPEIPALSHYVPAH EGPEDELAKTFPLQLITWKGKNRANSTQYANPWLIEAQQQKLWINPQDAQKRGIAQGDTV RIHNARGICEIPAEVTPRIIPGVVAMQAGAWWQPDEQGIDKGGCANVLSSARITALAKGN SHQTMLVEVAKA >gi|333596725|gb|GL892087.1| GENE 1066 1189478 - 1191805 1876 775 aa, chain - ## HITS:1 COG:pbpC KEGG:ns NR:ns ## COG: pbpC COG4953 # Protein_GI_number: 16130444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli K12 # 8 771 8 767 770 1185 79.0 0 MQIARLIRSRWLWLAGALLVLGGLIVVADRVWPLPLKEVNPARVVVDEQGVPLWRFADSE GIWRYPVSIEDVSPRYLEALIQYEDRWFWDHPGVNPLSVLRAAWQDLTAGRVVSGGSTLT MQVARLLDPHPRTFGGKIRQLWRAMQLEWHLSKREILTLYLNRAPFGGTLQGVGAASWTY LGKPPSQLSYSDAALLAVLPQAPSRLRPDRWPERAEAARNKVLDRMLTQGVWSEKQVKES REEPVWLAPRQMPQLAPLFSRMMLSKSRDTKIVTTLDAALQRQLEELALNWKSRLPARSS LAMIVVDHTSMKVRGWVGSVDINDDSRFSHVDMVNAIRSPGSVLKPFIYGMALDDGLIHP ASLLQDVPRKTGDYRPGNFDSGFHGPVSMSEALVRSLNLPAVQVLEAYGPKRFAGMLSNA GLPLILPAGAQPNLSLILGGAGARLADIAAAYSAFARQGKAGRLRLQPGDPLIERPLLSQ GAAWIIRRILANEAQPLPDSALPQVAPLAWKTGTSYGYRDAWAIGLNARYVIGIWTGRPD GTPVAGQFGFASAIPLLNQVNNMLQSRSMVDEARLPRDPRPASVGRGVICWPGGQSLPEG SENCRRRLSTWLLEGSEPPTLLLPEQEGIRGIRFPVWLDKEGKRVAADCPDATEKVLDVW PLPLEPWLPVAEKRAARLPARSEVCPPRDNHNAAPLMLSGVREGAVIKRLPGEKNITLYV STSGGEGQRWWFLNGEPLDGHQRNYSLQLYLPGKYQLIVLDETGQTATVNFEFDR >gi|333596725|gb|GL892087.1| GENE 1067 1191807 - 1196759 5247 1650 aa, chain - ## HITS:1 COG:ECs3386 KEGG:ns NR:ns ## COG: ECs3386 COG2373 # Protein_GI_number: 15832640 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1650 1 1653 1653 2591 78.0 0 MKPFRLAAISLALLTTFTLVGCDNSDDKPQAAAPAASTASEQKTPATPDPEKLAKLAAQS QGKALTLLDASEVQLDGAATLVLTFSVPLDPSQDFAKTVHVVDKKSGKVDGAWELAPNLK ELRLRHLEPNRNLVVTVERNLLALNKATFGIDYEKAITTRDVEPTVGFASRGSLLPGKVV EGLPVMALNVNNVDVNFYRVKPESLASFVSQWEYRNSLTNWESDNLLKMAELVYTGRFDL NPARNTREKLLLPLKDIKPLQQSGVYIAVMNQAGHYNYSNAATLFTLSDIGLSAHRYHNR LDIFTQSLENGAAQSGVTITLLNNKGQTLAEANSDADGHAKLETDKEAALILASKDGQTT LLDLKLPALDLAEFDIAGNPGYSKQFFMFGPRDLYRPGETVILNGLLRDSDGKPLPDQPV KLDVLRPDGQVARTIVVQPENGLYRFNYQLDSGAQTGMWHIRANTGDNQQRMWDFHVEDF MPERMALNLTGQKTPVSPQEDVDFNVVGYYLYGAPANGNSLQGQLFLRPLRDAVPALPGF QFGDIAEENLSRSLDEVQLTLDEQGRGQVTTESQWKEAHSPLQLILQASLLESGGRPVTR RAEQAIWPAAELPGIRPQFASKAVYDYRTDTTVNQPIVDENGNASFDIVYADVSGAKKAV SGLQVRLVRERRDYFWNWSESEGWQSQFDQKDLIEGEQELNLKADETGKVTFPVEWGSYR LEVKAPDDMVSSVRFWAGYSWQDNSDGTGAARPDRVTLKLDKPAYQPGDTINLHIAAPAA GKGYAMIESSEGPLWWKEIDVPANGLDLSIPVDKAWKRHDLYLSTLVVRPGDKSKSATPK RAVGLLHLPMGDENRRLNIALDTPQKMRPNQTLSVKVKASVKEGAVPQKVNVLVSAVDSG VLNITDYVTPDPWEAFFGQKRYGADIYDVYGQVIEGQGRLAALRFGGDGDELKRGGKPPV NHVTIIAQQAQPVMLDANGEGTITLPIGDFNGELRLMAQAWTEDDFGSSESKIIVAAPII TELNTPRFLASGDTSRLTLDLTNLTDQPQTLNVALTATGKLSLEGAQPQPVELPPGARTT LFIPVRALEGYGDGEVTAQVTGLQLPGETFTPQQKSWKIGVRPAFPAQTVNTGTMLNPGE SWSAPAQHIDGFSPATLQGQLLLSGKPPLNLARYIRELQAYPYGCLEQTTSGLFPSLYTN AAQLKALGIKGDTDDKRRAAIDIGISRLLQMQRDDGGFALWDKNGPEEYWLTAYVTDFLV RAGEQGYSVPADAVNSANSRLLRYLQDPGMMSIRYSDNTQASKFAVQAYASLVLARQQKA PLGALREIWDRHAQAASGLPLMQLGMALKLMGDAPRSQQALDLALKTPRNDSRNWMADYG SQLRDNALMLSLLEEYKLLPDVQNRLLNALSEDAFSQRWLSTQESNALFLAGRSLQTLSG AWQATTSLSEQAQSSDKAQVENLNGDQLGAVQVTNTGTTPLWVRLDSTGYPEYAPQPSSH VLQIERHILATDGSSKSLSSLKSGELVLVWLEVKASQNVPDALVVDLLPAGLELENQNLA SSSASLQDSGSEVQNLLNQMQQSDIQHMEFRDDRFVAAVPVNEGQPVTLVYLARAVTPGT YQVPVPMVESMYVPQWRATGAASGPLIVVP >gi|333596725|gb|GL892087.1| GENE 1068 1197048 - 1198592 1967 514 aa, chain + ## HITS:1 COG:SA0233_1 KEGG:ns NR:ns ## COG: SA0233_1 COG1263 # Protein_GI_number: 15925945 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 1 433 1 436 437 314 42.0 3e-85 MKRAVNALQNFGKSLYGPVLILPIVGLFIAFGNVLGNGNLAEYLPFLGHPLIQSVGQLIA KSAVSVLVNLALVFAVGIPIGLATRDKGYAALIGLVTFIVFINAMNVTLQLQGELAPAEQ MKAAGQSMVLGVQVLEMGVFAGILTGALSGYLYNKYSSVQFNGAMAIYSGHCFVAIVILP VSMLLGVVMSELWPYAQHGISALALAIKGSGPFGVAIYGFLERILVPTGLHHLVYTPFLY TELGGTQEVCGTAYQGARNIYFAEMACPDVKQLSSTVVWDARGISKMFGLPAAALAMYMT AKPERKAIAKAILIPAALTSLLVGVTEPIEFSFLFVAPLLFVVHAVLTGIGMMLFSLFGV HAIGANGIIDFILYNLPLGTEKSNWPMYIVVGLIMFALYFLVFRFLILRFNMKTPGREDE DQETRLYSKQEYQAKGNNDGLGESIVVGLGGRENIEVVDNCYTRLRVTVKDVAIIDEPRL KATGAKGIIKQGNNVQVVYGLHVKKMREAVETFL >gi|333596725|gb|GL892087.1| GENE 1069 1198605 - 1199972 1842 455 aa, chain + ## HITS:1 COG:CAC0533 KEGG:ns NR:ns ## COG: CAC0533 COG1486 # Protein_GI_number: 15893823 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 6 443 4 440 441 446 47.0 1e-125 MFTPPFILSIAGGGSTYTPGIVKSLMVRLHDFPLAEIRLYDIDEARQNTIAPVVEKVIRD HSQSIKFTVTSDPEVAFSGAHFVFAQMRVGQYKMREQDEKIPLRHGVVGQETCGPGGLAY GLRTILPMVELIDRVERYAHEKAWIVNYSNPAAIVAEGVRRLRPNARVLNICDMPVAAMR NMGAILGVDRHKLEVDYFGLNHFGWFTHVRVDGEDKLPELRKHIAKFGLLTEDAAKTDPQ HSDPSWVKTWRNIKPIMDLFPEYLPNPYLQYYLMPNQIVEHQNPDYTRANEVMNGREKKL FAAAEEYKRTGILPDAFHVGVHGEFIVDVACSLAFNLRQRHLVMVENRGAITNLPYDAVV EVPAYITSEGPEPVRMGQVPLFHQTLLQQQLASEQLLVEATIEGSYEKALQAFTLNRTVP TMEHAKAILDEMIEANRDYWPALQKAWQDGEAVKK >gi|333596725|gb|GL892087.1| GENE 1070 1200063 - 1200908 857 281 aa, chain + ## HITS:1 COG:sseA KEGG:ns NR:ns ## COG: sseA COG2897 # Protein_GI_number: 16130446 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 281 54 334 334 442 76.0 1e-124 MSTSYFVAADWLIEHGDDPEVQIIDARMAPPGQEHRDVPDEYRAGHLPGAVFFDIEALSD HTSPLPHMLPRPEAFSVAMRELGISKDKHLVVYDEGNLFSAPRAWWMLKNFGVEKVSILA GGLAGWKRDELPLQQGDVTLPEGEFDATFDAHVVKRLTDVLVVSHEKTAQIVDARPAPRF NAEADEPRPGLRRGHIPGALNVPWGDLVFEGELKTTDELRAIFERAGVDLHRPVIASCGS GVTACVVILALATLGANDVTLYDGAWSEWGARDDLPVEPAK >gi|333596725|gb|GL892087.1| GENE 1071 1200908 - 1201678 844 256 aa, chain + ## HITS:1 COG:BH0181 KEGG:ns NR:ns ## COG: BH0181 COG1737 # Protein_GI_number: 15612744 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 13 238 8 221 241 80 28.0 4e-15 MDNRLATLLTRGSSLTRAEYRVLAHLTEHPLLVGNITVRELAQATFVSTATIMRLCQKLG FSGFSEFIWHCKQLLSDTPHITVQPEQQTELPALFAQFIANYQHTFQWVTQDKRQQFASL LRQKESFFLYGAGFSYLFAEYLTKKLQVLGKTAFISGPGDSRNIFLSNAARYQVFIAVSR SGETEQVLDKARIAKNVGMTIVAFTRASANTLAGMADVHFALYDEAVHFAAEAAGVTSFE SNLVLLMDLLLLEATG >gi|333596725|gb|GL892087.1| GENE 1072 1201696 - 1202472 1083 258 aa, chain - ## HITS:1 COG:no KEGG:ECL_03871 NR:ns ## KEGG: ECL_03871 # Name: not_defined # Def: enhanced serine sensitivity protein SseB # Organism: E.cloacae # Pathway: not_defined # 1 258 1 258 258 469 96.0 1e-131 MSETKNELETLLAQAATEPAHRPAFFRTLLESTVWVPGTAAEGEQVVEDSSLDLLHWEKD DGTSVIPFFTSLEALQEAVEDEQAFVVMPVRTLFEMTLGQTLFLNAKLPTGKEFTPREIS HLMGEEGNPLSTQEVLEGGETLLLSEVAEPPAQMIDSLTTLFKTIKPVKRAFLCSIKESA DEQPVLLIGIEADGDIEEIIQAAGSVATDTLPGDEPIDICQVKKGEKGISHFITEHITPF YERRWGGFLRDLKTNRII >gi|333596725|gb|GL892087.1| GENE 1073 1202584 - 1203870 2043 428 aa, chain - ## HITS:1 COG:STM2536 KEGG:ns NR:ns ## COG: STM2536 COG0260 # Protein_GI_number: 16765856 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 778 88.0 0 MTEAMKITLSTQPADARWGEKATYSINNDGITLHLTGKDDLGLIQRAARKIDGLGIKHVS LEGEGWDTDRSWAFWAGYKGPKGTRKIEWANLDEAGQKELESRLQIIDWVRDTINAPAEE LGPEQLAQRAVDLLCGVAGEKMSYRITKGEDLREQNYLGIHTVGRGSERPPVLLALDYNP TGDKEAPVFACLVGKGITFDTGGYSLKQSAFMDSMKSDMGGAATITGALAFAITRGLNKR VKLYLCCADNMVSGNAFKLGDIIRYRNGKNVEVMNTDAEGRLVLADGLIDACAQKPELII DMATLTGAAKTALGNDYHALFSFDDKLAARLLASAAAENEPFWRLPLAEFHRSQLPSNFA ELNNTASAAYPAGASTAAGFLSHFVENYHEGWLHIDCSATYRKAAVEQWSAGATGLGVRT VANLLTAE >gi|333596725|gb|GL892087.1| GENE 1074 1203924 - 1204124 268 66 aa, chain - ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 110 96.0 7e-25 MGLKWTDSREIGEALYDANPDLDPKTVRFTDMHQWICDLEDFDDDPNASNEKILEAILLV WLDEAE >gi|333596725|gb|GL892087.1| GENE 1075 1204126 - 1204461 414 111 aa, chain - ## HITS:1 COG:ECs3391 KEGG:ns NR:ns ## COG: ECs3391 COG0633 # Protein_GI_number: 15832645 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 189 89.0 1e-48 MPKIVILPHADLCPDGAVLEAKTGETILDVALRAGIEVEHACEKSCACTTCHCIVREGFD SLAESTEDEDDMLDKAWGLEPDSRLSCQAAVTDEDLVVEFPRYTINHAREH >gi|333596725|gb|GL892087.1| GENE 1076 1204463 - 1206313 2483 616 aa, chain - ## HITS:1 COG:ECs3392 KEGG:ns NR:ns ## COG: ECs3392 COG0443 # Protein_GI_number: 15832646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1006 92.0 0 MALLQISEPGLSAAPHQRRLAVGIDLGTTNSLVATVRSGQAETLADEQGRHLLPSVVHYQ QQGHAVGFDARANASRDPANTISSVKRMMGRSLADIQARYPHLPYQLQASENGLPMIATA AGLLNPIRVSADILKALAERATATLGGDLDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADYIREQAGISDRSDVRVQRELLDAAIDAKIALSDAQSVSVNVAGWQGEITRDQF SELIAPLVKRTLLACRRALKDAGVDASEVLEVVMVGGSTRVPLVRERVGEFFGRTPLTSI DPDKVVAVGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QEFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGL LSVTAMEKSTGVESSIQVKPSYGLTDGEIASMIQDSMSYAEQDVKARMLAEQKVEAARVL ESLTGALAADAALLSAAERQVIDQAAAHLSLVAMGHDADAIEEAIKNVDKQTQDFAARRM DKSVRVALKGQSVDEV >gi|333596725|gb|GL892087.1| GENE 1077 1206328 - 1206843 579 171 aa, chain - ## HITS:1 COG:ECs3393 KEGG:ns NR:ns ## COG: ECs3393 COG1076 # Protein_GI_number: 15832647 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 257 90.0 9e-69 MDYFTLFGLPAQYPIDLQALTIRFQDLQRQYHPDKFASGTQAEQLAAVSHSATINQAWQT LRHPLARAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLERFIQR VKGMFDTRHQQMVEQLNNETWDVAADTVRKLRFLDKLRSSAEQLEEKLLDF >gi|333596725|gb|GL892087.1| GENE 1078 1206923 - 1207246 436 107 aa, chain - ## HITS:1 COG:ECs3394 KEGG:ns NR:ns ## COG: ECs3394 COG0316 # Protein_GI_number: 15832648 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 194 93.0 5e-50 MSITLSDSAAARVSSFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPASDDTVFEDKGV KVVVDGKSLQFLNGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV >gi|333596725|gb|GL892087.1| GENE 1079 1207260 - 1207646 534 128 aa, chain - ## HITS:1 COG:ECs3395 KEGG:ns NR:ns ## COG: ECs3395 COG0822 # Protein_GI_number: 15832649 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 232 97.0 1e-61 MAYSEKVIDHYENPRNVGSFDNSDESVGSGMVGAPACGDVMKLQIKVNNEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD YKSKREAK >gi|333596725|gb|GL892087.1| GENE 1080 1207671 - 1208885 1652 404 aa, chain - ## HITS:1 COG:STM2543 KEGG:ns NR:ns ## COG: STM2543 COG1104 # Protein_GI_number: 16765863 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 793 96.0 0 MKLPIYLDYSATTPVDPRVAEKMMQCLTLDGNFGNPASRSHRFGWHAEEAVDIARNQIAD LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQSNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIATIGEMCRARGIIYHVD ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRIRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMESEMARLRTLRNRLWDGVKDMEEVYLNGDLEQGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMTDELAHSSIRFSLGRF TTEEEIDYTIKLVRNSIGRLRDLSPLWEMFKQGVDLNSIEWSHH >gi|333596725|gb|GL892087.1| GENE 1081 1209003 - 1209494 575 163 aa, chain - ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 163 1 162 162 261 96.0 3e-70 MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGF LNNITLGELVNNQEVLDVSGRQHSQDSQRSTRTQDAIDVKLRA >gi|333596725|gb|GL892087.1| GENE 1082 1209731 - 1210456 931 241 aa, chain - ## HITS:1 COG:STM2545 KEGG:ns NR:ns ## COG: STM2545 COG0565 # Protein_GI_number: 16765865 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Salmonella typhimurium LT2 # 1 241 1 242 243 439 92.0 1e-123 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA QIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAEQAPVALVFGRERVGL TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQEKPVEPKEEAAYPLVD DLERFYGHLEQTLLSTGFIREGHPGQVMNKLRRMFTRARPESQELNILRGILASIEQKNK A >gi|333596725|gb|GL892087.1| GENE 1083 1210589 - 1211392 985 267 aa, chain + ## HITS:1 COG:STM2546 KEGG:ns NR:ns ## COG: STM2546 COG0483 # Protein_GI_number: 16765866 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 500 91.0 1e-141 MHPMLTIAVRAARKAGNVIAKHYETPDSVETSQKGSNDFVTNVDKAAEAIIIETIRKSYP QHTIITEESGEHEGTDQDVQWVIDPLDGTTNFVKRLPHFSVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRCSNARDLDGTILATGFPFKAKQHATTYMNILGKLFTECA DFRRTGSAALDLAYVATGRVDGYFELSLKPWDFAAGELIAREAGAIVCDFTGGHNYMSTG NIVAGNPRVVKAMLANMRDELSDALKR >gi|333596725|gb|GL892087.1| GENE 1084 1211452 - 1212432 944 326 aa, chain - ## HITS:1 COG:STM2551 KEGG:ns NR:ns ## COG: STM2551 COG2215 # Protein_GI_number: 16765871 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 326 1 326 328 428 77.0 1e-120 MSVISSPARKPRRWLPLWPLALFVLLAVGGALWLWQAWPQVMMKSILWQREVNQQMSGLL KAVAENPTKAGGSLLAFSFIYGVLHALGPGHGKIVITTWLATHPSKLKSSIGLTLASSLL QGGVAIALVVVVLSLLQLPARQLHMSSFWLEKGSYALVGLLGLLLCWRALKKLRALLQKP KFKAFTPHHVHHENCGCGHQHLPTQEQLQRGDDWRARLMIILSMGMRPCSGAIMVLLFSK VIGVFGWGMLSALAMAAGTSLTISSLALLVHSFRQLAIKLSGNKTPVLWRQVGWTTLALA GGVILLVAAVTMWMSAVPVGRGLRPF >gi|333596725|gb|GL892087.1| GENE 1085 1212423 - 1213061 506 212 aa, chain - ## HITS:1 COG:STM2552 KEGG:ns NR:ns ## COG: STM2552 COG3683 # Protein_GI_number: 16765872 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 212 1 212 212 332 75.0 2e-91 MQIVKQSAVALFLAVFTFTACAHPHSFISLKTELVTDGTQLSGLKMRWTMDEITSADLLY DAGNARPGDEIWKKLAAEVMANVLGQHYFTEFWHNGQKVKFLNRPTEYGMTRDGHQAVLT FILPLAHPQPLAGQKYTFSTFDPSYYVDMHYAEDSDVQLPEILQKSCKIAVHTPTPSEET LNFAVSLDKEDAPPEDMELGKQFAQEVTLQCQ >gi|333596725|gb|GL892087.1| GENE 1086 1213187 - 1214464 1404 425 aa, chain + ## HITS:1 COG:STM2553 KEGG:ns NR:ns ## COG: STM2553 COG3711 # Protein_GI_number: 16765873 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 1 425 1 425 425 548 66.0 1e-156 MMTTLEIPSVLSSSQRRCQVLLMLYLPDAAITAQSIIAANGVDDVMARQDIAETRDEIQR YHRLDIVTHHDGCYRIEGSALNQRLCLLHWLRRALRLCPHFVAQQFTPALKTALKQHGIA RPLYDDANLRALINFCARKLQRQFETRDVQFLQLYLQYCLIQHHLGNTPQFSPVQRSWTQ SRGEYFTAQEIVRHWKRRVPQGTHSDEQLFLALLFMMLRTPDPVLDKHQQDQRLRRAIVR MIARFRAQTGMNFSDEQGLTDQLYIHLAQALDRSLFDIGIDNSLPEEIHRLYPRLLRTTK EALFELEAEFGLRFSGEEMALVAVIFGAWLMQETDLHEKQVVLLTGEDKACEELIEQQLR ELTLLPLNIRYLSLEAFKKEGAPREAALVITPYPTALPLFSPPLIHAVETLNTQQQEHIR VMLES >gi|333596725|gb|GL892087.1| GENE 1087 1214465 - 1215604 1309 379 aa, chain - ## HITS:1 COG:STM2554 KEGG:ns NR:ns ## COG: STM2554 COG0477 # Protein_GI_number: 16765874 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 377 1 377 379 587 89.0 1e-167 MVLHSTRWLALSYFTYFFSYGIFLPFWSVWLKGIGLTPETIGILLGAGLVARFLGSLLIA PRVSDPSLLIKAVRILALLTLVFAACFWVSHQFAWLMVVMVGFNLFFSPLVPLTDALANT WQKQITMDYGRVRLWGSIAFVIGSALVGKLVSLYDYRAILALLTLGIASMLLGMLLRPSV MPQGESRHQESAGWPAWRSLVAQSWRFLACVCLLQGAHAAYYGFSAIYWQGAGYSASAVG YLWSLGVVAEVIIFALSQKLFRRFGARDLLLLSAVCGVARWGIMGWTTELPWLIVAQILH CGTFTVCHLAAMRYIAAREGGDVIRLQAVYSAVAMGGSIAVMTVFAGFLYQHLGHGVFWV MALVALPAIVIRPKVAART >gi|333596725|gb|GL892087.1| GENE 1088 1215777 - 1216199 570 140 aa, chain + ## HITS:1 COG:yphA KEGG:ns NR:ns ## COG: yphA COG2259 # Protein_GI_number: 16130468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 140 25 164 164 216 87.0 9e-57 MNSLRYFDFGSSRSLLLLIARIAIVVLFIIFGYPKLTGFSGTVQYMTSLGAPMPMLAAII AVVMEVPAAILIVLGFFTRPLAVIFVFYTLGTAVIGHHYWDMTGDAVVPNMINFYKNVSI AGAFILLAITGPGAISLDRR >gi|333596725|gb|GL892087.1| GENE 1089 1216254 - 1217507 1696 417 aa, chain - ## HITS:1 COG:STM2555 KEGG:ns NR:ns ## COG: STM2555 COG0112 # Protein_GI_number: 16765875 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Salmonella typhimurium LT2 # 1 417 1 417 417 801 98.0 0 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN LAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDDMAKQAKEHKPKMIIGGFSAYSGI VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGDEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVE VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEAVIERVKGKVLDICARFPVYA >gi|333596725|gb|GL892087.1| GENE 1090 1217494 - 1217739 96 81 aa, chain - ## HITS:1 COG:no KEGG:SC2550 NR:ns ## KEGG: SC2550 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 5 58 16 69 82 72 68.0 6e-12 MVLCNVKNLHHKAEKKSVENGESFIAQTLAWRGGKRLRKIVCQDLLSQNYSVILLPVVQQ DCLFRPKIYLLAESGDADVKA >gi|333596725|gb|GL892087.1| GENE 1091 1217812 - 1219002 1437 396 aa, chain + ## HITS:1 COG:ZhmpA_2 KEGG:ns NR:ns ## COG: ZhmpA_2 COG1018 # Protein_GI_number: 15803077 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 EDL933 # 150 396 1 247 247 434 83.0 1e-121 MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFAHNPELKEIFNMSNQRNGDQREALFNA IAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGSHLLATLDEMFSPGQEVLDAW GKAYGVLANVFINREAQIYSENASKNGGWEGTRAFRIVEKTPRSALITSFEFEPVDGQPV ADYQPGQYLGVWLKPEGFPHQEIRQYSLTRKPNGKGYRIAVKREEGGQVSTWLHNVASVG DIVHLAAPAGDFFMAVETNTPVTLISAGVGQTPMLAMLDTLAKANHSAQVNWFHAAENGD VHAFADEVKTLAAGLPHFTAHTWYRLPTEDDRAAARFDSEGLMDLGQHEGAFSAPGMQFY VCGPVAFMQYAAKQLVDLGVNKDNIHYECFGPHKVL >gi|333596725|gb|GL892087.1| GENE 1092 1219083 - 1219421 527 112 aa, chain - ## HITS:1 COG:ECs3419 KEGG:ns NR:ns ## COG: ECs3419 COG0347 # Protein_GI_number: 15832673 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 187 99.0 3e-48 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVSDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI >gi|333596725|gb|GL892087.1| GENE 1093 1219502 - 1220839 1579 445 aa, chain - ## HITS:1 COG:STM2562 KEGG:ns NR:ns ## COG: STM2562 COG2204 # Protein_GI_number: 16765882 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 1 445 1 445 445 803 92.0 0 MTSRKPAHLLLVDDDPGLLKLLGMRLVSEGYSVVTAESGQEGLKVLSREKIDLVISDLRM DEMDGLQLFTEIQKQQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYKAIDS ALEHAAPSGDDAWRESIVTRSPAMLRLLEQALMVAQSDVSVLINGQSGTGKEILAQAIHN ASPRSKNAFIAINCGALPEQLLESELFGHARGAFTGAVSSREGLFQAAEGGTLFLDEIGD MPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKVMARNEFREDLYYRLNV VNLKIPALAERAEDIPLLANHLLRQAADRHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV IEQCVALTSSPVISDALVEQALEGENTALPTFAEARNQFELNYLRKLLQITKGNVTHAAR MAGRNRTEFYKLLSRHELEANDFKE >gi|333596725|gb|GL892087.1| GENE 1094 1220836 - 1221567 729 243 aa, chain - ## HITS:1 COG:no KEGG:Ent638_3040 NR:ns ## KEGG: Ent638_3040 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 243 8 254 254 338 72.0 2e-91 MSHVFFRALRAVFSSKNVRLSLPCILLAGCVTHAPKSAISQKQEDKWPQKQLADFLSTPC DDIWSLSGRDVESNPLFWLRGIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARI TPVERRANVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQLSEERFRYSKLQQSSDSELDA LRQQQESLREQLETTTRKLENLTDIERQLSTRKPAGSYLPDGSKGNAATTPDSDTPKQED VKP >gi|333596725|gb|GL892087.1| GENE 1095 1221585 - 1222970 1384 461 aa, chain - ## HITS:1 COG:STM2564 KEGG:ns NR:ns ## COG: STM2564 COG0642 # Protein_GI_number: 16765884 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 14 454 34 474 480 731 85.0 0 MAFLLILLPLLVLAWQAWQSLNALSAQAALTNRTTLIDARRSEAMTNAALEMERSYRQYC VLDDRTLARVYQNQRKRYSEMLDAHAGVLPDDKLYQALRQDLNDLAQLQCKNSGPDAAAA ARLEAFANANTEMVQSTRTVIFSRGQQLQQEIAERGQFFGWQALVLFLVSLGLVLLFTRM IIGPVKGIQRMINRLGEGKSLGDTVVFKGPRELRSVGQRIIWLSERLAWLESQRHQFLRH ISHELKTPLASMREGTELLADEVAGPLTPEQKEIVAILDASSRNLQKLIEQLLDYNRKLA DGAVVLESVEIEPLVDMVISAHSLPARAKMMHTQVDLNAPACLAEPMLLMSVLDNLYSNA VHYGTESGTIYIRSYNNGSRVFIDVANTGSPIPDDEKTMIFEPFFQGSHQRKGAVKGSGL GLSIARDCIRRMQGELNIVSDERADVCFRIELPLEPEKSMK >gi|333596725|gb|GL892087.1| GENE 1096 1223550 - 1227434 4999 1294 aa, chain - ## HITS:1 COG:ECs3423_1 KEGG:ns NR:ns ## COG: ECs3423_1 COG0046 # Protein_GI_number: 15832677 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Escherichia coli O157:H7 # 1 984 2 985 985 1852 91.0 0 MEILRGSPALSAFRINKLLARFQAADLPVSNIYAEYVHFADLNAPLNAEERVQLERLLKY GPSLSSHTPTGKLILATPRPGTISPWSSKATDIAHNCGLSQINRLERGVAYYVEASTLSD AQWQAVAAELHDRMMESVFDSLEDAQKLFSHHQPAPVQSVDLLGQGRQALIDANLRLGLA LAEDEIDYLQDAFVKLNRNPNDIELYMFAQANSEHCRHKIFNADWIIDGEQQPKSLFKMI KNTMEQTPDHVLSAYKDNAAVMEGSEVGRFFADREAGRYDFHQEPAHILMKVETHNHPTA ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVT ALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVDSHNGEELRGYHKPIMLAGGIGNIR ADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRC QEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGRFNLRDILSDEPGMSPLE IWCNESQERYVLAVAADQLPLFDELCRRERAPYAVIGEATEEQHLTLSDTHFDNQPIDLP LDVLLGKTPKMTRDVTTRKAAGKALDRQGITVSEAVNRVLHLPAVAEKTFLVTIGDRTVT GMVSRDQMVGPWQIPVANCAVTTASLDSYYGEAMALGERTPVALLDFAASARLAVGEALT NIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSM KTRWQEGSEQREMTSPLSLVITAFARVEDVRHTVTPQLVTEDNALLLIDLGKGHNALGAT ALAQVYRQLGDKPADVRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFTG HCGVEANIATLGEDRLAALFNEELGAVIQVRAADRDAVEAILAQHGLADCVHYLGKAVQG DRFVIEADGHAVFSESRTTLRMWWAETTWQMQRLRDNPECADQEHNAKANDQDPGLNVKL SFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLAGRTG LDDFQALVACGGFSYGDVLGAGEGWAKSILFNSRVRDEFETFFHRPQTLALGVCNGCQMM SNLRELIPGSEAWPRFVRNQSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGQV EVRDAAHLAQLESKGLVALRFVDNFGKVTETYPANPNGSANGITAVTSESGRVTIMMPHP ERVFRTVSNSWHPENWGEDSPWMRIFRNARKQLG >gi|333596725|gb|GL892087.1| GENE 1097 1227705 - 1229255 1735 516 aa, chain + ## HITS:1 COG:STM2567 KEGG:ns NR:ns ## COG: STM2567 COG4623 # Protein_GI_number: 16765887 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Salmonella typhimurium LT2 # 1 496 1 496 514 778 79.0 0 MKKLKINYLLIGIVTLLLAVALWPSIPWFGKAENRIAAIQERGELRVSTLSSPLIYDDIN GKTIGLDYELAQLFADYLGVKLNVTVRQNINQLFDDLDHNRADILAAGLVYNSERSKNYQ PGPTYYSVSQQVVYRVGSLRPRSLADITDQQLTIAPGHVVIDDLRALKEKKYPNLSWTVD PKLGTTELLEQVKDKKLAYTIADSVAISLFQRVHPEIAVALDVTDEQPVTWFTQLDDDQT VSAAMLDFFNAINEDGTLARLEEKYLGHGDDFDYVDTRTFLRAVDSVLPDLQPLFEKYAQ EIDWKLLAAISYQESHWDAQATSPTGVRGLMMLTKNTAQSLGISDRTDAEQSISGGAQYL QDMMAKVPETVPEGERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWSDVKQRLPLLSQ KQWYQKLTYGYARGHEAYAYVENIRKYQISLVGYLLEKEKEATEAQQLAESYPVVAPDEL NHPAVSILPFVAFSAADAFEKSHLTDPNILVQVPRR >gi|333596725|gb|GL892087.1| GENE 1098 1229143 - 1229682 455 179 aa, chain - ## HITS:1 COG:STM2568 KEGG:ns NR:ns ## COG: STM2568 COG0590 # Protein_GI_number: 16765888 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Salmonella typhimurium LT2 # 1 178 1 178 183 282 77.0 2e-76 MPPAFRLEYQPLSNPEHTHEYWMRHALALAQRAWEEGEVPVGAVLVHNNQVIGEGWNRPI GRHDPTAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCSGAMVHSRIGTLVFGARDE KTGAAGSLMDVLGHPGMNHQVKTIGGVLAPECSGLLSDFFRMRRQQKKQQKAELKPQGD >gi|333596725|gb|GL892087.1| GENE 1099 1229707 - 1230342 673 211 aa, chain - ## HITS:1 COG:STM2569 KEGG:ns NR:ns ## COG: STM2569 COG0560 # Protein_GI_number: 16765889 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 347 85.0 7e-96 MASNERRVVFFDLDGTLHQQDMFGTFMRYLLRRQPLNALLVLPLLPVIGIALLVKGRAAR WPMSLLLWGCTFGHSEARLKQLEQDFAHWFRGHVAAFPVVQARLTSYLDANDADIWLITG SPQTLVEQVYFDTPWLPRVNLIATQIARGYGGWVLTLRCLGHEKVVQLEKRIGTPLRLYS GYSDSKQDNPLLYFCQHRWRVTPLGELQQLE >gi|333596725|gb|GL892087.1| GENE 1100 1230346 - 1231710 1744 454 aa, chain - ## HITS:1 COG:STM2570_2 KEGG:ns NR:ns ## COG: STM2570_2 COG1263 # Protein_GI_number: 16765890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Salmonella typhimurium LT2 # 98 454 1 357 357 553 90.0 1e-157 MDKTAALASDILLGIGGEKNIQRLENCMTRVRVEVHNDEKLDLTRLKQLPGVSGYVKQGQ QHQLIVGPGKAAQVVDAMRALMTGAETAPAFDDVARTKAQAKAKYKAPMSDALRQLANVF IPLIPAFIASGLITGIINILKRPDIVGDFATQYPNLLGILAIFGSAVFAIMNILVGVNTA KVFGGSLAMGGVMAGILSSPQLAQITLFGEALQPGRGGVIAVLLVVILMCWIEKKLRALL PGSIELILNPLLTTLITGSVAIVALQPLGGAISEAIAHGASLAIDRGGLLVGAVLSGTFL PLVLTGLHQGLVPIHVELVQAHGYNALLPILSMAGVGQVGAAIAVLMKTRNARLKKVIKG ALPVGLLGIGEPLIFGVTLPLGKPFLAACLGGAVGGALISYWKVATVITFGISGLPLALT IVTGKVMLYLLGYLVAVIAGFLFTWLLGFNDPEE >gi|333596725|gb|GL892087.1| GENE 1101 1231720 - 1232616 927 298 aa, chain - ## HITS:1 COG:STM2571 KEGG:ns NR:ns ## COG: STM2571 COG2103 # Protein_GI_number: 16765891 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Salmonella typhimurium LT2 # 1 297 1 297 297 442 86.0 1e-124 MNLGSLVSETRNPQTMDLDALSTLELVNRFNQQDTLVALAVKETLPEVAKAVDAAADALK AGGRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDNKQLG EDDLKELNLTAQDLVVGLAASGRTPYVIGGLEYARQTGCTTVAISCNPGSPIAQVAAIAI SPVVGPEALTGSTRLKSGTAQKLVLNMISTGAMVKFGKVYQNLMVDMQATNVKLVDRACR MVMEATGAGREEAEKVLQQTDHDVKPAILMILTGLDAAAARARLEAHHGFLRAALEHQ >gi|333596725|gb|GL892087.1| GENE 1102 1232735 - 1233583 832 282 aa, chain + ## HITS:1 COG:STM2572 KEGG:ns NR:ns ## COG: STM2572 COG1737 # Protein_GI_number: 16765892 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 282 1 282 282 458 86.0 1e-129 MNCLIRIRQRYAGFAQSDKKLADFLLSQPDRARHLSSQQLAGEAGVSQSSVVKFAQKIGY KGFPALKLAISEALVSNPNPQSMPVHNQIRGDDPMRLVGEKLIKENVAAMHATLDVNTEE KLLESVAMLRNARRIVLTGIGASGLVARNFGWKLTKIGYNAIVEQDMHALLATVQAMDPD DLLLAISYSGERREINMATDEALRVGGKILAITGFSPNALQQRATRCLYTIAEEQATRSA AISSTSAQMMLTDLLFMALVQQDLEHAPERIRHSEELVKRLV >gi|333596725|gb|GL892087.1| GENE 1103 1233640 - 1233900 262 86 aa, chain + ## HITS:1 COG:STM2576 KEGG:ns NR:ns ## COG: STM2576 COG1145 # Protein_GI_number: 16765896 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 86 1 86 86 150 90.0 8e-37 MALLITKKCINCDMCEPECPNQAISMGDSIYEINSDRCTECIGHYETPTCQKVCPIPNTI LKDPAHVENDEQLWDKFVLLHHADKI >gi|333596725|gb|GL892087.1| GENE 1104 1233897 - 1234277 437 126 aa, chain - ## HITS:1 COG:acpS KEGG:ns NR:ns ## COG: acpS COG0736 # Protein_GI_number: 16130488 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli K12 # 1 126 1 126 126 230 96.0 4e-61 MAILGLGTDIVEIARIEAVIARSGDRLAKRVLSDNEWAIWEAHQQPVRFLAKRFAVKEAA AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVAHMHVTLADERHYACA TVIIES >gi|333596725|gb|GL892087.1| GENE 1105 1234277 - 1235008 1076 243 aa, chain - ## HITS:1 COG:ECs3430 KEGG:ns NR:ns ## COG: ECs3430 COG0854 # Protein_GI_number: 15832684 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 242 1 242 243 416 92.0 1e-116 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRI LRQTLDTRMNLEMAVTEEMLTIACDTKPHFCCLVPEKRQEVTTEGGLDVAGQLDKMRDAC KRLADAGILVSLFIDADFTQIKAAADVGAPYIEIHTGCYADAKNDAEQAKELERIAKAAT YAASLGLKVNAGHGLTYHNVKAIAALPEMHELNIGHAIIGRAVMSGLKEAVSEMKRLMLE ARQ >gi|333596725|gb|GL892087.1| GENE 1106 1235084 - 1235791 673 235 aa, chain - ## HITS:1 COG:ECs3431 KEGG:ns NR:ns ## COG: ECs3431 COG1381 # Protein_GI_number: 15832685 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 235 1 235 242 429 92.0 1e-120 MDGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGALQPFTPLLVRF GGRGEVKTLRSAEAVSLALPLSGITLYSGLYVNELISRVLEHETRFSELFFDYLHCIQSL AGATGTPEPALRRFELALLGHLGYGVDFLHCAGSGDEVEDTMTYRYREEKGFIASVVVDN STFTGRQLRALYEREFPDADTLRAAKRFTRIALKPYLGGKPLKSRELFRQFMPKR >gi|333596725|gb|GL892087.1| GENE 1107 1235809 - 1236714 1143 301 aa, chain - ## HITS:1 COG:STM2580 KEGG:ns NR:ns ## COG: STM2580 COG1159 # Protein_GI_number: 16765900 # Func_class: R General function prediction only # Function: GTPase # Organism: Salmonella typhimurium LT2 # 1 300 1 300 301 576 95.0 1e-164 MSEEKTYCGFIAIVGRPNVGKSTLLNNLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY VDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGKTPVI LAVNKVDNVQEKADLLPHLQWLGSQMNFLDIVPLSAETGLNVDTIAGIVRKHLPEAIHHF PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFQTNERGGYDINGLILVERE GQKKMVIGNKGAKIKTIGIEARKDMQDMFEAPVHLELWVKVKSGWADDERALRSLGYGED Q >gi|333596725|gb|GL892087.1| GENE 1108 1236711 - 1237391 701 226 aa, chain - ## HITS:1 COG:ECs3433 KEGG:ns NR:ns ## COG: ECs3433 COG0571 # Protein_GI_number: 15832687 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 415 97.0 1e-116 MNPIVINRLQRKLGYTFHHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKMLELE >gi|333596725|gb|GL892087.1| GENE 1109 1237615 - 1238589 1162 324 aa, chain - ## HITS:1 COG:ECs3434 KEGG:ns NR:ns ## COG: ECs3434 COG0681 # Protein_GI_number: 15832688 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 617 92.0 1e-177 MANMFALILVIATLVTGLLWCLDKFIFAPKRRERQAAAQAATGDALDAKTLKKVGPKPGW LETGASVFPVLAIVLVVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL IETGHPKRGDIVVFKYPEDPRLDYIKRAVGLPGDKVTYDPVAKEVTIQPGCSSGTACENA LPVTYSNVEPADFVQTFARRNGGEATSGFFQVPKGETKENGIRLVERKETLGDVTHRILT VPIAQDQLAMYYQQPGQQLATWIVPPGHYFMMGDNRDNSADSRYWGFVPEANLVGKATAI WMSFEKQEGEWPTGVRLNRIGGIH >gi|333596725|gb|GL892087.1| GENE 1110 1238605 - 1240410 2340 601 aa, chain - ## HITS:1 COG:STM2583 KEGG:ns NR:ns ## COG: STM2583 COG0481 # Protein_GI_number: 16765903 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Salmonella typhimurium LT2 # 1 597 1 597 599 1126 95.0 0 MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMAAQVLDSMDLERERGITIKAQSVT LDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVPDVLERLVRDI PPPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGTMRKGDKIKVMSTGQVYNADRLGIF TPKQVDRTELKCGEVGWLVCAIKDILGAPVGDTLTGARNPADKALPGFKKVKPQVYAGLF PVSSDDYENFRDALGKLSLNDASLFYEPESSTALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYEVETTSKEVIYVDSPSKLPPLNNIQELREPIAECHMLLPQEFLGNVIT LCIEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASNM VRVDVLINGERVDALALITHNDNAPYRGRELVEKMKDLIPRQQFDIAIQAAIGNHIIARS TVKQLRKNVLAKCYGGDVSRKKKLLQKQKEGKKRMKQVGNVELPQEAFLAILHVGKDGNG K >gi|333596725|gb|GL892087.1| GENE 1111 1240569 - 1241051 -341 160 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPTVKQCKLNCWAVIITQRAVDEERHSTKHLPPSRAAPSIASPSSVMSDSPIRLANCVWQ SHRINNTSPGVFFITGSITAKPVSVSKLALQLLLSPHHRPVAARFAYDRRQFTLLVLLRI MRVLLSFFYLLFLPRKLLLYFNFHSLFRRQPIEQSSNPIL >gi|333596725|gb|GL892087.1| GENE 1112 1241382 - 1241936 -99 184 aa, chain - ## HITS:1 COG:ydcM KEGG:ns NR:ns ## COG: ydcM COG0675 # Protein_GI_number: 16129391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 2 177 127 323 402 125 38.0 4e-29 MVSLPKVGWVKYRKSREIIGDLKNATISLNQGKWYISFNTEQTVPDPIHPSDIKSTIVLN NVDSVHLSSGGGGDNTYQAEEKKKLIRLNKTLTRRKKHSQNWLKTKGKIDRVKSKAARIR LDNIHKATTAICKNHAVVEVVNLMDSVSDKNDNTLSMRYEFVRQLIYKQEWLGGEVIRRE SKPL >gi|333596725|gb|GL892087.1| GENE 1113 1242459 - 1244474 1682 671 aa, chain - ## HITS:1 COG:ECs2662 KEGG:ns NR:ns ## COG: ECs2662 COG1344 # Protein_GI_number: 15831916 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 671 1 585 585 326 49.0 8e-89 MAQVINTNSLSLLTQNNINKNQSSMSTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKG LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQSSTGTNSESDLNSIQDEIKSRL DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDLKKIDSSTLNLTGFNVNGKGE VANTKATADDLKLAGFTKGTTDANGVTDYKNTIANSKASASDLLANISDKSVITGGGANA FGVAATAGYKYDAASKSYSFDATGADSAKTLSIINPNTGDSSQATVTIGEKDQKVNISQD GKITAADDNATLYLDKQGNLTKTNAGGVAVATWDGLISNSDSTGAVPVGVKTKITLTSGA ASGMSVSSEGAGIQTSTNAQILADGAFAAKVSIDGGAATDIMVANNGNITAADGSALYLD SSTGGFTATAAGNTAATLDALIANGKTATMTVASGTSQNTVYSTTGSADFTSLAKVDTVN ITNAHVSAEGMANLTKGANFTLDLGGTGTATHTVTAAGVVKDAANDDVYVDDGALSSEPT KDVTYFEQKNGAITNSTGGTIYETADGKLTTEATTASTSTADPLKALDDAISQIDKFRSS LGAVQNRLVSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLSKANQ VPQQVLSLLQG >gi|333596725|gb|GL892087.1| GENE 1114 1245783 - 1246229 82 148 aa, chain - ## HITS:1 COG:ECs0284 KEGG:ns NR:ns ## COG: ECs0284 COG1961 # Protein_GI_number: 15829538 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 1 147 35 181 184 234 80.0 6e-62 MSGTVANRPALKKLLRTLSEGDTLVVWKLDRLGRSMRNLVLLVDELRQRGIHFKSLTDSI DTSSPMGRFIFHIMSALAEMERELIVERTRAGLAAAREKGRIGGRRPKLTPEQWAQAGRL IANGMDRKQVAIIYDVAVCTLYKKFPAR >gi|333596725|gb|GL892087.1| GENE 1115 1246695 - 1247219 350 174 aa, chain + ## HITS:1 COG:no KEGG:PputGB1_3390 NR:ns ## KEGG: PputGB1_3390 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_GB1 # Pathway: not_defined # 18 162 170 314 321 135 51.0 6e-31 MASRRRYLNNWSPWAVYYSSANTTTASDGTLKAASPVARIVKSQNENQRTDVDEVGFTWC GCGTANAEAEGIKISRLDVGVYILTGSDGLASEGWQLLPPMDPGGMGELGIVEAEQAESG GLTIRLFKRKYMLSDEGEIVKTKGEPMDVPVNSWIDVRLDMPDDSAFNQRMNQC >gi|333596725|gb|GL892087.1| GENE 1116 1247864 - 1248262 268 132 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2100 NR:ns ## KEGG: Kvar_2100 # Name: not_defined # Def: terminase small subunit # Organism: K.variicola # Pathway: not_defined # 1 130 1 133 334 183 84.0 2e-45 MAKPDWGELQQRFLSEHAATGVSPKEWCEAQGLNYATARRYIKKTSAQKPAQKKVRIAQK EQSANELMDDDGLTAQQRLFVAEYLKDGNATQAAIRAGYSKKSAEQIGYQLLQKTSVAQA IAQQQKGSILAS >gi|333596725|gb|GL892087.1| GENE 1117 1248482 - 1248712 115 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295096348|emb|CBK85438.1| ## NR: gi|295096348|emb|CBK85438.1| hypothetical protein ENC_17230 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 76 20 95 95 134 96.0 2e-30 MAQLLIFADDEPAKLLKIRSYRSKILYLYANDEVRCLDVVIFFSTFLKGESGAILVAADR YVSRKEIIEAYDALIG >gi|333596725|gb|GL892087.1| GENE 1118 1248918 - 1249130 113 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|295096349|emb|CBK85439.1| ## NR: gi|295096349|emb|CBK85439.1| hypothetical protein ENC_17240 [Enterobacter cloacae subsp. cloacae NCTC 9394] # 1 70 18 87 87 132 100.0 1e-29 MKYFELERMPNSTWVAIFESLFAEKDEKAWVEGYCIVTNCSNSEVSTRFIYLKEKCEEAN SIYRVKHSAL >gi|333596725|gb|GL892087.1| GENE 1119 1249307 - 1249618 159 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNAHKKAIAIHVTCLSSVLDLGYLLDKNLPINIKNTTIPTGTPTIGVANALTPTAATIP PKVLNMMGMINIMIAWGIPAFQRSNTIMTTKNTMRKGIVCPLN >gi|333596725|gb|GL892087.1| GENE 1120 1249808 - 1250152 206 114 aa, chain - ## HITS:1 COG:no KEGG:ECL_01680 NR:ns ## KEGG: ECL_01680 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 46 114 21 89 91 99 84.0 4e-20 MAAATGWINAVRCLIWRNQFWCEVRVGIETIIGLAALVISAIAGAFGLGHIRGTSKAEAK ADQQRTKDNAAATVAAAERRVEATKEASNVQQTVNHMSDDDVDRELRDNWTRKG >gi|333596725|gb|GL892087.1| GENE 1121 1250912 - 1251127 109 71 aa, chain - ## HITS:1 COG:no KEGG:KP1_2176 NR:ns ## KEGG: KP1_2176 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 71 22 92 92 73 50.0 3e-12 MFYRRGDSRHRPWISRLAWLITVTYSAVPLAYLCGIYPHSSWATIAANIIFLSVLVAVKG NVARLVDHLRH >gi|333596725|gb|GL892087.1| GENE 1122 1251180 - 1251566 240 128 aa, chain - ## HITS:1 COG:no KEGG:ESA_01017 NR:ns ## KEGG: ESA_01017 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 128 1 126 126 134 65.0 9e-31 MSDPFSGTGLAGLALTGASVYGLLTGTDYGVVFGAFAGAVFYIATAADLSVLRRLAYFFV SYIVGILCSGLLGAKLTSWTGYTEKPLDAIGAVIASALAVQILTFLNKQDIGSLVALITR RGGSGGTK >gi|333596725|gb|GL892087.1| GENE 1123 1251745 - 1252716 471 323 aa, chain - ## HITS:1 COG:no KEGG:SARI_02670 NR:ns ## KEGG: SARI_02670 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 4 316 17 345 359 111 31.0 6e-23 MSGDKKDPKGKAKGGVARAKSLTKEQRSDIAKKAAAARWRDKIHKATHMGNFKDEFGIDA ECYVLSDESKTAVVTKAGLARLLGIGNFARDVDKLLSAGYMKEFGGPSLKAKIENPINFQ YSGQSKNINNAHGFDIDVIVDIGKALIDAKSADALPPSRIPAADTAQKLINASAKSGIKG VAYALAGYRPEVQEVIDAFKAFVREEARQYEKEFPDELYEEWYRLYGLNRPEKGRPIRFG QLTNMQIYVPLAKSKGKILEQIRASRDENGKQSDKLHLFLSEIGVKALRQHIGKLLGVAA MSDNKEEYEAGIEKVFGRIKPEL >gi|333596725|gb|GL892087.1| GENE 1124 1253223 - 1253594 87 123 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHKKLKLAGAFLLAISSLPAYTADKIDGWIFLTNTNNFNFYGKERSLTENKGIRSIIIQE VPISKNSSAKILYSHFTIPSKACKNEFGEITMYEMSGKVAGKYDYVKGGSSAAAYIADLV CGN >gi|333596725|gb|GL892087.1| GENE 1125 1253738 - 1254550 318 270 aa, chain - ## HITS:1 COG:no KEGG:STM0903 NR:ns ## KEGG: STM0903 # Name: not_defined # Def: chaperone # Organism: S.typhimurium # Pathway: not_defined # 1 269 1 269 271 428 82.0 1e-118 MKLEAALKHFSPQGMHISEDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISK TDEQLAVQALAQFAIKNAPKNVRKAAGDKLGACMLTLAQFAFAEYSCSAATSVMCHSCCG TGRTTKEQVTRKVSYPWGKAPYWASRSRAVRPSDWELWTEVTEVVPAVCDVCEGKGTISA RCRCGGIGEVVDRKATKERGVPVFKTCERCSGIGFSAISSATVYRVILKRLPDLHQSSWS RNWKPLFEMLVDTLRKWECQAAVEFEKATT >gi|333596725|gb|GL892087.1| GENE 1126 1254681 - 1254872 76 63 aa, chain - ## HITS:1 COG:no KEGG:Entcl_1853 NR:ns ## KEGG: Entcl_1853 # Name: not_defined # Def: endodeoxyribonuclease RusA # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 62 56 117 123 106 75.0 4e-22 MPKSWSKAKREQYVGQPHQQKPDKDNLEKALLDAVFDEDSHVWDGRVTKIWGETGQIIIG EAT >gi|333596725|gb|GL892087.1| GENE 1127 1255034 - 1255315 165 93 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0789 NR:ns ## KEGG: Ent638_0789 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 3 93 12 102 102 159 87.0 5e-38 MAIYRSKKWLAAVGQIERCVLCGAWGTQVAHRNEGKGMGLKTDDCATAALCVCCHDSIDN GNKLNREERRQLMDRAIVLTVIEVARRGLVVPA >gi|333596725|gb|GL892087.1| GENE 1128 1255524 - 1256123 566 199 aa, chain - ## HITS:1 COG:no KEGG:SPAB_00993 NR:ns ## KEGG: SPAB_00993 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 3 199 4 200 200 355 87.0 6e-97 MAQLQLIKQSSGILIPATPETSDLLQSKIKLGAVLVADFKQVRNPAFHRRFFALLNLGFE YWEPTGGAISSNERKLVTGYAKFLASYGGNESALLDAAEHYLVQVASRRVTNGISLCKSF DAYRAWVTIQAGHYDAIKLPDGTLQKHPRSISFANMDEIEFQQLYKAALDVLWRWILSKA FRDQGEAENAAAQLMSFAG >gi|333596725|gb|GL892087.1| GENE 1129 1256523 - 1256756 151 77 aa, chain - ## HITS:1 COG:no KEGG:Entcl_1850 NR:ns ## KEGG: Entcl_1850 # Name: not_defined # Def: DinI family protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 1 77 1 77 77 117 75.0 2e-25 MKVELTIDRTKKLPDGAMPALEKELLKRLRNQFEDCSLVVRRAGSDGLSVYGGAKEAKKT VEGILQETWESADDWFY >gi|333596725|gb|GL892087.1| GENE 1130 1256913 - 1257293 76 126 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLPVLSGCVIKEQTRYVESPVATNLNNPAGAATKKCSITNYKEAKLDSQSPSGTVIIDY GNRFDIMFENFGNGEVFHSPILNIAKENMIIGYSGSMMYSKGIGKMAGFYGTYNTESKFN TIFQCY >gi|333596725|gb|GL892087.1| GENE 1131 1257767 - 1258147 147 126 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2003 NR:ns ## KEGG: Kvar_2003 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 125 1 127 128 137 59.0 2e-31 MDKKTASLGFSALFVASVAFAETTSNWVEVTTADDGVFSAKAGTYRNVKGDSSALFMYQT KNKKVEYYKVSIKDADCDSGYGEIKLFYMDGKLAFKGDYVAEGNSVGAGIGDFMCAVRGA ANSQKR >gi|333596725|gb|GL892087.1| GENE 1132 1258725 - 1259144 184 139 aa, chain - ## HITS:1 COG:no KEGG:CKO_01898 NR:ns ## KEGG: CKO_01898 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 136 1 134 137 108 56.0 6e-23 MITEKDNVFYCDCGFSFERGRSGAHSCELGLRKKLAESEAKLAALAAENAGLKKVPATDS ETMLLALDAFNTRGSMRPDVGLQQAINVVMQRRETPATDTFLAEVRAQAVEMFAKEMHAD ISGDDAREFAAQLRKGAAS >gi|333596725|gb|GL892087.1| GENE 1133 1259141 - 1259401 258 86 aa, chain - ## HITS:1 COG:no KEGG:CKO_01899 NR:ns ## KEGG: CKO_01899 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 86 1 86 86 147 96.0 2e-34 MARKKTDRERALIINRIIELVKEQGRITTNDVVAMFGLHRTTADKYLRVAVEQGGLVRHG RCGIFRDLRATIDFDLKRFSHNKAAA >gi|333596725|gb|GL892087.1| GENE 1134 1259405 - 1260091 514 228 aa, chain - ## HITS:1 COG:no KEGG:CKO_01900 NR:ns ## KEGG: CKO_01900 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 228 1 228 228 358 96.0 9e-98 METVIQALEKMGRATYREVAARLDIDPVDALTMLREQRDQGLCDFGDGGWFLGTVKGQSQ QSTPKAPVHPAPRLKGEEPEPVDPDVVRQQLREQGAMTTVSLAAAVNRNARGMVSVLRAL ERQGVVVKNGKGKGVTWSLAVVTEPLKQEPVPEAPAAPEEAKPVEQIVSEIPSFTEGCDA VEAVPAVRDISREIRRTRNKLEQLTKLRDAVRVIGRHRNLVQQLTGRE >gi|333596725|gb|GL892087.1| GENE 1135 1260108 - 1260860 516 250 aa, chain - ## HITS:1 COG:STM1015 KEGG:ns NR:ns ## COG: STM1015 COG1484 # Protein_GI_number: 16764375 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Salmonella typhimurium LT2 # 1 250 1 249 249 430 83.0 1e-120 MKNMIGTGSALERLKKIIPASVQPKFTSVEEWQAWQETEGRKRSGEIDKMNQRARSEKIF GRAGIQALHRSCSFANYEVKGPEQRQAYSMAKSYAQNFGGGSFASFVFSGAPGTGKNHLA AAIGNHLLGAGHSVLVVTIPDLMLRVRECYDDGQSESSLLNDLCNVDLLVLDEVGIQRGS SGEKVIINQVIDRRLSSMRPVGILTNLNHGELVNTLGARVMDRLQMDGGIWVNFDWESYR KNVSHLRPVK >gi|333596725|gb|GL892087.1| GENE 1136 1260863 - 1261759 234 298 aa, chain - ## HITS:1 COG:no KEGG:KPN_01390 NR:ns ## KEGG: KPN_01390 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 298 1 295 295 407 71.0 1e-112 MRDYGKVHTSFWISDGMRRVSDDARLLALYLLTGQHTNMIGCFRLPDGYVSEDLNWSSER VSKGFDELSKNGFATRDITTKWVLIRNFMSWNPVENPNQGIAAMRLFSQVPDKSSVKPEL ARIMNDAIAHFGGAKLKGSERVLEPFLNQEQEQEQEQEQEQEEENILGHGSATPPGSDDS SDGVTSQKKNPYPDDFEQAWAIYPKRSGGNSKADACKAWKARVKTGATVQELLDGTRRYA EFVRATGKLNTEYVKQAATFYGPSKHYEEAWEVTAPSGMRDLNAISRPDKSIPPGVRG >gi|333596725|gb|GL892087.1| GENE 1137 1262043 - 1262291 66 82 aa, chain - ## HITS:1 COG:no KEGG:CKO_01903 NR:ns ## KEGG: CKO_01903 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 24 82 26 84 84 98 91.0 7e-20 MSNLLKSTFAKNLSGRASPQLSRRGGAFQAVDMYKRMSQASRKGRIFDDVLRHAKLWAEK QTVPADRFESKRIKRGKQQGLF >gi|333596725|gb|GL892087.1| GENE 1138 1262307 - 1262849 489 180 aa, chain - ## HITS:1 COG:no KEGG:CKO_01904 NR:ns ## KEGG: CKO_01904 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 17 180 1 164 164 273 82.0 3e-72 MHAISYQQNTGLTPVAMINRNQPGAADKHEQIRDAVRAWAASLDNQDVVAGIIVEEWERQ GGAGLEFPEDLSRKRQKLFRWLDGDTEYARKNISQLSPAIIAVLPLEFRGRLVPQDCFMT RYAAMEKEIGEAKRAVILRAPQHQLVKEVREGIEHLLALLPGEAVVQVLSGLAVMGPGVM >gi|333596725|gb|GL892087.1| GENE 1139 1262852 - 1263082 158 76 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2278 NR:ns ## KEGG: ECO103_2278 # Name: not_defined # Def: putative antirepressor protein Cro # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 72 1 71 90 78 51.0 8e-14 MNKETQQKISNAASRASIGKHFGISGQAVGKWIYKNGIPQKRIIPLCQLLGWVVTPHEID PEAYPNPTDGLPKQES >gi|333596725|gb|GL892087.1| GENE 1140 1263194 - 1263595 297 133 aa, chain + ## HITS:1 COG:STM1012 KEGG:ns NR:ns ## COG: STM1012 COG1396 # Protein_GI_number: 16764372 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 133 1 136 136 160 61.0 8e-40 MNEINYPVFAKRIQQVMTENGWNKSDLAKKVMLSHTAVQNWAKGKNVASGERLKRLAAAT GKPEHWFFLPIEEIDSSERSQRELDETELVMLSLFNQLPEAEKLRLILHTKGVLNDLELL KNDVYDLINNNHK >gi|333596725|gb|GL892087.1| GENE 1141 1263792 - 1263998 285 68 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0759 NR:ns ## KEGG: ECIAI1_0759 # Name: not_defined # Def: putative prophage Kil protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 68 69 136 136 120 88.0 1e-26 MVHQHYGTQTVNRGAVMPGMLVKHKDSTWTASANARGRLYLHRGVERTYTKDLLVEVYLN GVGNGLSH >gi|333596725|gb|GL892087.1| GENE 1142 1264311 - 1267730 2391 1139 aa, chain + ## HITS:1 COG:no KEGG:SPC_1011 NR:ns ## KEGG: SPC_1011 # Name: not_defined # Def: exodeoxyribonuclease # Organism: S.enterica_Paratyphi_C # Pathway: not_defined # 273 1139 148 975 975 1012 64.0 0 MEFFHLLKASQKSGKKDAVIWFTAKSAARANLQLDVALEEAGIEETGRGKDYAKPIRTDF PVYNDLPEEGTVDYTWCERYALQDDGRTWLPKAVAESTSPVDNTSAPETTVKVETIDESV TLENRTPAVRFAFHLTCDKYQTHISKEQQLAASEMSLDEGNTYLQNLLLAKNDTPEVAEL SLSAEWKLVQAIKQVFAPDEEHEVKLLAAFMADWLRVDAGDRNEVVREWKNGKLTLLKSE RTSDAGVETDQHIAIDDGIQIGEHDDENTRYPVCRMPFRKQLLSQFTTDEMRHHVTREEY EAISTLEMDTDNSYVQNLLLAAENCEEVKGYDTKDLWRYTDAIRKVFSQEKRHELALVLR FTKIWTETDYIDRGILAREWAAGNRISSVQRTDSGTNADGGHVTDRGEGAHHTLDSLDLE IACALLPMDFNPHEIPGSVLRRAKEIVAKKEEPWKSWSSILRNQPGVLAVNRTAIFNLVR IAPENIHKTPAAHLEFVNRTMTTNFNSTTELMPLPSAAPGISRENVGKQLAAERGEFVEG ISDPTDPKWEMTQRVATTTHEENLQRIREEGARRRAEEAKGQPKITSMGNGIFSIDALLN QNASNEAEKTENAAETTSDVQMETTQPEKVENTDPVQPGEGADAVDTQAVTVAPVEILAA AAPSLANQEQAGDHQKTDSAIKEEPEPAQSEPESAQHEPEVHQEEPSVEYPAYFEPGRYE GLPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSAVLDMGNLVHALALQPEQ LDAEFSIEPVIPEGAFTTTPTLRAFIDEYNASLPALLSADDIKVLLEEYNATLPAQVPLG ASLEETAQNYMTLPANFQRIDADQKQTATAMKACIKEYNATLPTPVKTSGSRDALLEQLA IINPDMVAQEAQKPQPLKVSGTKADLIQAVKTVKPDAVFADELLDAWRDNPEGKVLVTRQ QLGTALNIQKALLAHPTAGMLLTHPSRAVEVSYFGFDEETGLEVRVRPDLEIDLDGVRIG ADLKTISMWNVKQESLRARLHREIIERDYHLSAAMYCETAALDQFFWIFVNKDENYHWIA IIEASADLLELGMLEYRKAMRAIATGFDTGEWPAPIIDDYIDELNDFDLRRLEALRTQA >gi|333596725|gb|GL892087.1| GENE 1143 1267742 - 1268854 731 370 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2056 NR:ns ## KEGG: Kvar_2056 # Name: not_defined # Def: DNA single-strand annealing protein RecT-like protein # Organism: K.variicola # Pathway: not_defined # 1 369 1 368 369 589 79.0 1e-167 MENMNIVTAEQQAPNTISASNSIFNVQALGQLQAFAGLMAQSVVTVPAHLAGKPADCMAI VMQAMQWGMNPYAVAQKTHLVNGQLGYEAQLVNAVITSSSAIHGRFHYRYGGDWERCTKT KEVTREKMGKNGKYTVAERVRDWTDEDEEGLYVQVGAILRGESEITWDKPLYLSQVVTRN SPLWVSKPDQQIAYLGVKYWARLYCPHVILGVYTPDEIEQPTEREINPAPVQKMSLADIK GENVVNTQDPQEPSVNIDTLAQDFRDRIEAAQDVDSAKAVRADIETAKATLGSALFTELK NKAVKRYYLVDARNKVEAAINSLPSPEEPDATERFAEAERVLASSKRHLGDELHDQFSIT LADMKPEYVD >gi|333596725|gb|GL892087.1| GENE 1144 1268889 - 1269512 362 207 aa, chain + ## HITS:1 COG:no KEGG:Rahaq_4972 NR:ns ## KEGG: Rahaq_4972 # Name: not_defined # Def: hypothetical protein # Organism: Rahnella_Y9602 # Pathway: not_defined # 6 201 3 223 227 187 48.0 2e-46 MTKIIERGMIFNSEMVRAILDGRKTQTRRPVKFPILDRNLGCELAGNELAGELSAGNYLN SAFGKPGDRIWVRETWARYNIDQNSHDIAYRATTPADWPEEGRWRPSIHMPRWASRITLE ITGVRIERLNGISEADAEAEGIDMDALADSQDCYDCIAGHNMTGRPTATGAFKYLWESIY GSDSWRANPWVWVIEFKRIEGDGHATD >gi|333596725|gb|GL892087.1| GENE 1145 1269499 - 1269741 220 80 aa, chain + ## HITS:1 COG:no KEGG:KPN_01378 NR:ns ## KEGG: KPN_01378 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 80 8 86 86 119 82.0 3e-26 MRLINRGNQQSPLARQACEIALAAHQQRYGDYGRSKMKETYTVRVEGVKVWVEVVNRKTS YVATAMTGMRRLRALPGQVS >gi|333596725|gb|GL892087.1| GENE 1146 1269788 - 1270072 157 94 aa, chain + ## HITS:1 COG:no KEGG:STM2635 NR:ns ## KEGG: STM2635 # Name: not_defined # Def: excisionase-like protein # Organism: S.typhimurium # Pathway: not_defined # 1 94 1 94 94 129 74.0 4e-29 MSKATNKFELMSTKDICGQLCISSRTLERYRKRAPNENPFPEPDCAYMGGPNKWLKTKVT AWQIREMSRTTRKPMSHLNLTRDDKGRLTRPDAA >gi|333596725|gb|GL892087.1| GENE 1147 1270050 - 1271279 550 409 aa, chain - ## HITS:1 COG:STM2636 KEGG:ns NR:ns ## COG: STM2636 COG0582 # Protein_GI_number: 16765956 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 409 1 409 409 793 94.0 0 MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPE FGLKAARDEVAKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHSMVCIQKESAGQ VLRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYSEITRRVISNGRQCYSWAVKRQL LEVNPLSEMSGRDFGIQKQMGERTLDRKELAIVWRAIEDSRLIERNKILYKLSLIWACRV GELRQAEVAHFDFEEGIWTVPWENHKTGRKTKKPIIRPIIPEMLPLIKRAIELAPGRFVF SKYEDKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEIM LGHKLPGVWSVYDKHTYVEEMRVAYGKWWARLMSIVEPDILEFTPRQVG >gi|333596725|gb|GL892087.1| GENE 1148 1271710 - 1272186 344 158 aa, chain - ## HITS:1 COG:STM2637 KEGG:ns NR:ns ## COG: STM2637 COG3086 # Protein_GI_number: 16765957 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Salmonella typhimurium LT2 # 1 158 1 158 159 222 76.0 2e-58 MIKEWATVVSWQDGVALVSCDVKASCSSCASRAGCGSRVLNKLGPQTSHTIAVPSDQPLV AGQKVELGIAEGSLLTSAMLVYLSPLAGLFVMGGVFQMLFGTDLAAMCGAALGGVGGFWL AKGVSPRLAAREAWQPVILSVALAPDQLRVETLSSEAR >gi|333596725|gb|GL892087.1| GENE 1149 1272183 - 1273136 855 317 aa, chain - ## HITS:1 COG:STM2638 KEGG:ns NR:ns ## COG: STM2638 COG3026 # Protein_GI_number: 16765958 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Salmonella typhimurium LT2 # 1 317 1 318 318 540 85.0 1e-153 MKQLWFAMSLMAGSLFFSANASADVSSGALLQQMNLASQSLNYELAFISINKQGVESLRY RHARLDNQPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK RLAPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWIDAETKLPMRVDLLDRDGETL EQFRVISFDVNSQVGNSMQNLAKASLPPLLSVPAGDSVNFNWVPSWIPQGFSEVSSSRRQ LPTIETPVESRLYSDGLFSFSVNINRATANSSEQMLRTGRRTVSTTVRDNAEITIVGELP PPTAKRISDSIKFRAAQ >gi|333596725|gb|GL892087.1| GENE 1150 1273136 - 1273786 593 216 aa, chain - ## HITS:1 COG:STM2639 KEGG:ns NR:ns ## COG: STM2639 COG3073 # Protein_GI_number: 16765959 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Salmonella typhimurium LT2 # 1 216 1 216 216 295 87.0 3e-80 MQKEKLSALMDGETLDNELLNELSHSPEMQQTWESYHLIRDTLRGDTSEVLHFDISARVM AAIENEPVHQTTPLIPEAQPAPHQWQKMPFWHKVRPWASQLTQMGVAACVSLAVIVGVQH YNTQSEANQQPEAPVFNTLPMMGKASPVSLGVPADASASGGQQQQVQEQRRRINAMLQDY ELQRRLHSEQLQFEQAQTQQAAVQVPGNQTLGTQSQ >gi|333596725|gb|GL892087.1| GENE 1151 1273818 - 1274393 319 191 aa, chain - ## HITS:1 COG:STM2640 KEGG:ns NR:ns ## COG: STM2640 COG1595 # Protein_GI_number: 16765960 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 359 99.0 2e-99 MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRA LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIDAENFESGGALKEISNPEN LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIRR >gi|333596725|gb|GL892087.1| GENE 1152 1274819 - 1276438 1506 539 aa, chain + ## HITS:1 COG:nadB KEGG:ns NR:ns ## COG: nadB COG0029 # Protein_GI_number: 16130499 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Escherichia coli K12 # 1 539 1 540 540 1024 90.0 0 MNTTPELHCDVLIIGSGAAGLSLALRLAEHQNVIVLSKGPMSEGSTFYAQGGIAAVFDET DSIASHVEDTLIAGAGIVDEHAAEFVASNARHCVQWLIDQGVLFDTQVQPNGEESYHLTR EGGHSHRRILHAADATGKAVETTLVSKALSHPNIRVLERSNAVDLIISDKIGLPGTRRVV GAWVWNRNKEKVETCQAKAVVLATGGASKVYQYTTNPDIASGDGIAMAWRAGCRVANLEF NQFHPTALFHPQARNFLLTEALRGEGAYLKRPDGSRFMPDFDPRGELAPRDIVARAIDHE MKRLGVDCMYLDISHKPADFIRQHFPMIYEKLLGLGIDLTRDPVPIVPAAHYTCGGVMVD DHGRTDVDGLYAIGEISYTGLHGANRMASNSLLECLVYGWSAAEDITKRMPYARPTTHLP AWDESRVENPDELVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRIMMLQQEIDEYYAN FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHYTLDYPDTLEVSGPSVLSPQAHINR >gi|333596725|gb|GL892087.1| GENE 1153 1276423 - 1277160 522 245 aa, chain - ## HITS:1 COG:ECs3441 KEGG:ns NR:ns ## COG: ECs3441 COG4123 # Protein_GI_number: 15832695 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli O157:H7 # 1 245 41 285 285 387 74.0 1e-108 MSQLKAQLRRDGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRILDIGTGSGLQAL MLAQRTEEHVTIDAVELDPQAARQASENAADSPWAERIRVECADVLTWAPEQTARYDLIV SNPPYYAPGVECGTPEREQARYTGSLDHKALLTSAAELISEEGFFCVVLPESTGNTFIAI AREIGWNLRLRTDISDTEGRLPHRVLLALSPKEGECFIDRMVIRGPDQRYSEDYTALTQA FYLFM >gi|333596725|gb|GL892087.1| GENE 1154 1277293 - 1278621 1301 442 aa, chain + ## HITS:1 COG:STM2643 KEGG:ns NR:ns ## COG: STM2643 COG0513 # Protein_GI_number: 16765963 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 442 1 443 444 715 90.0 0 MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL PVLQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAANTHLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW RNQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKVELLK HLLKQEEATRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQVKRTEGIKRLTDGRVN VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL QKIGRYVDEPLKARVIDGLRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR DTKNIGKRRKPSSAAPETKTEE >gi|333596725|gb|GL892087.1| GENE 1155 1278673 - 1279056 521 127 aa, chain - ## HITS:1 COG:STM2646 KEGG:ns NR:ns ## COG: STM2646 COG3445 # Protein_GI_number: 16765966 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 231 92.0 3e-61 MITGIQITKAANDDLLNSFWLLDSEKNEARCVVAKAGFAEDEIVPVNKLGEIEYREIPME VQPEVRVEGGQHLNVNVLRRETLMDAVEHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|333596725|gb|GL892087.1| GENE 1156 1279372 - 1280061 630 229 aa, chain + ## HITS:1 COG:ung KEGG:ns NR:ns ## COG: ung COG0692 # Protein_GI_number: 16130505 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Escherichia coli K12 # 1 229 1 229 229 434 91.0 1e-122 MTTPLTWHDVLAEEKQQPYFINTLSTVAAERQAGQTIYPPQKDVFNAFRYTELSDVKVVI LGQDPYHGPGQAHGLAFSVRPGVAIPPSLLNMYKELEGTIPGFTRPHHGYLESWARQGVL LLNTVLTVRAGQAHSHASLGWETFTDKVISLINEHREGVVFLLWGSHAQKKGAIIDRQRH HVLKAPHPSPLSAHRGFFGCNHFVLTNEWLEKRGEKPIDWMPVLPAESE >gi|333596725|gb|GL892087.1| GENE 1157 1280100 - 1281185 1153 361 aa, chain - ## HITS:1 COG:ECs3447 KEGG:ns NR:ns ## COG: ECs3447 COG0566 # Protein_GI_number: 15832701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 361 1 345 345 553 80.0 1e-157 MNDEMKNKSGKVKVMYVRSDDDSDKRTQNPRTGKGGGRPASSRADGGRRPARDDRNNRGD DRKRDDRKRDDRKRDDVVRDGGSPWRTVSRAPGEEAAEKADHGGISGKSFIDPEVLRRQR AEETRVYGENACQALFQSRPECIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDDAELTK ASGTEHHGGVCFLIKKRNGTTVQQWVSQADADDCVLALEDVGNPHNLGAMMRSCAHFGVK GVLLQDAALLESGAAIRTAEGGAEHVQPITGDSVLDALEQFRKAGYTIVTTSSRAATPLF KATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVESLNVSVATGVLLAEWWRQNK A >gi|333596725|gb|GL892087.1| GENE 1158 1281390 - 1281809 183 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein [Methanocorpusculum labreanum Z] # 37 136 17 115 120 75 38 1e-11 MNTVCANCQALNRIPDDRMDDGAKCGRCGHELFDGDVINATGATLDKLLKDDLPVVVDFW APWCGPCRNFAPVFEDVAEERSGKMRFVKVNTEAERELSARFRIRSIPTIMIFKNGEVID MLNGAVPKAPFDSWLNESL >gi|333596725|gb|GL892087.1| GENE 1159 1281879 - 1282577 452 232 aa, chain + ## HITS:1 COG:STM2650 KEGG:ns NR:ns ## COG: STM2650 COG3148 # Protein_GI_number: 16765970 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 226 1 226 226 385 85.0 1e-107 MTDNAVLQLRAERLARATRPFLARGNRIRRCQRCLLPLKVCLCETLAPSEAKSRFCLVMF DTEPMKPSNTGRLIADILPDTAAFQWSRTEPPQALLDLVANPDYQPMVVFPASYAGEQRQ VLTVPPSGKPPLFIMLDGTWTEARKMFRKSPYLDALPVISVDLSRVSAYRLREAHADGQY CTAEVAIALLDLAGDTQAAGALGSHFSCFRERYLAGKTVHKGSVTATEAESV >gi|333596725|gb|GL892087.1| GENE 1160 1282613 - 1285276 2559 887 aa, chain + ## HITS:1 COG:STM2651_1 KEGG:ns NR:ns ## COG: STM2651_1 COG1042 # Protein_GI_number: 16765971 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Salmonella typhimurium LT2 # 1 709 1 709 709 1215 85.0 0 MSQRGLEALLRPKSIAVIGASMKPDRAGYLMMRNLLAGGFNGPVMPVTPAYKAVQGVLAW PDVQHLPFVPDLAVLCTHAKRNLELLESLGQKGCKTCIILSSPPEQQPELLACASRYQMR ILGPNSLGLLAPWQGLNASFSPVPIRKGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL GDSLDIEVDELLDFLARDSKTSAILLYLEHLSDARRFVSASRSASRNKPILVIKSGRSPA AQRLLHSRSGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGEKLMIVSNGAAP AALALDELWLRNGKLATLGEETLKRLRDALPGSVVPDNPLDLRDDASSDRYIKAITILLD SQDFDALMVIHSPSAVAPGSESARALIEAVRNHPRGKYVTLLTNWCGEFSSQEARRLFSE AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPGNLTANSVDVHRLLQQAIEEGATS LDTHEVQPILGSYGMQTLPTWIAGDSAEAVHIAEQIGYPVALKLRSPDIPHKSDVQGVML YLRTATEVQQAADAIIDRVKMTWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM LGEGGVEWRPEEQAVVALPPLNMNLARYLIIQAIKSKKIRGRSALRPLDIAGLSQFLVKV SNLIVDCAEIQRLDIHPLLASGNEFTALDVTLDIAPFVGDRESRLAIRPYPLHLEEWVEM KNGERALFRPILPEDEPLLRAFISQVTKEDLYYRYFSEINEFTHDDLANMTQIDYDREMA IVAVRRAGEGEEILGVTRAISDPDNVDAEFAVLVRSDLKGLGLGRRLLEKLIGYTRDHGL SRLNGITMPNNRGMVTLARKLGFDVDIQLDEGIVSLSLSLTSTEKQE >gi|333596725|gb|GL892087.1| GENE 1161 1285386 - 1286741 1141 451 aa, chain + ## HITS:1 COG:STM2652 KEGG:ns NR:ns ## COG: STM2652 COG1502 # Protein_GI_number: 16765972 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 1 431 1 431 451 800 89.0 0 MLSKFKRNKHQQHLAQLPKISQSVDDVEFFYAPAHFRETLLEKIASATRRICIVALYLEQ DEGGRAILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRTAQENPGID IPVYGVPVNTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQLDKYRYDRYHLIRNPQMA DIMFNWVDKNLVHGRGVHRLDDPHRPKSPEIKNDVRSFRQELRDAVYRFQGDANNEELSV TPLVGLGKSSLLNKTIFHLMPCAEHKLTICTPYFNLPAVLVRNIIQLLRDGKKVEIIVGD KTANDFFIPEDQPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDEDNSYHLKG MWVDDEWMLLTGNNLNPRAWRLDLENAILIHDPQHALAAKRDRELELIRTHTTVVRHYRD LQSIADYPVKVRKLIRRLRRIRIDRLISRIL >gi|333596725|gb|GL892087.1| GENE 1162 1286786 - 1287109 173 107 aa, chain + ## HITS:1 COG:STM2653 KEGG:ns NR:ns ## COG: STM2653 COG5544 # Protein_GI_number: 16765973 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 4 107 6 107 107 159 85.0 9e-40 MRTPFLVIPLFLTGCSHMANDNWSGQDKAQHFLASAMLSAAGNEYALHQGYSRDRSATIG LMFSLSLGASKELWDSRPSGSGWSWKDFAWDVAGATTGYAVWQMAHY >gi|333596725|gb|GL892087.1| GENE 1163 1287106 - 1288413 1080 435 aa, chain - ## HITS:1 COG:STM2654 KEGG:ns NR:ns ## COG: STM2654 COG0477 # Protein_GI_number: 16765974 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 435 1 433 433 674 84.0 0 MTETVASADTDNTSLAGKDTRRRVWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGN TTTQLLQTAGVFAAGFLMRPIGGWLFGRIADRKGRKTSMLISVCMMCVGSLVIACLPGYD TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL LVVVILQQILSDEDLRAWGWRIPFAMGAALAVVALWLRRQLDETSQQEVRALKEAGSMKG LWRNRKAFLMVLGFTAAGSLSFYTFTTYMQKYLVNTTGMHANVASVVMTVALLVFMLIQP IVGALSDKIGRRTSMLIFGGMLTLGTVPLLTALQHTTSPYAAFALIMVALIIISFYTAIS GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSWGSETTFFWYVTVMGALAF IVSLMLHRKGKGIRL >gi|333596725|gb|GL892087.1| GENE 1164 1288565 - 1288918 176 117 aa, chain - ## HITS:1 COG:no KEGG:Ctu_31770 NR:ns ## KEGG: Ctu_31770 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 117 33 149 149 157 74.0 9e-38 MVEPYKSEILPHWRYKNAEVAARSAEEIYALFEEYRRNNDFVGMDMARKFIQMGYTRARR YANHKGGKKYDEKRQVKPLDHDPVKAEAAAVFKTWWDKIRADEDYLQRKKAHQQAWG >gi|333596725|gb|GL892087.1| GENE 1165 1292822 - 1295395 1863 857 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 857 1 811 815 722 46 0.0 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGINAGQL RTAIDQALSRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG TLTDLLKSAGATTANVTQAIEKMRGGESVNDQGAEDQRQALKKFTVDLTERAEQGKLDPV IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII QLKLEQQALNKESDEASKKRLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAELE QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIATQSEGKTMRLLRNKVTDAEIAEVL ARWTGIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGS FLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGELDYSHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQ RLYKRLEERGYEIHISDDALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP GKVIRLEANDDRIVAVQ >gi|333596725|gb|GL892087.1| GENE 1166 1295525 - 1296256 522 243 aa, chain - ## HITS:1 COG:STM2661 KEGG:ns NR:ns ## COG: STM2661 COG1496 # Protein_GI_number: 16765977 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 243 1 243 243 421 82.0 1e-118 MTKLIVPEWPLPEGVAACSSTRIGGVSQGAWESLNLGAHCGDNLEDVEENRKRLFAAGNL PSKPVWLEQVHGKAVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNQAGTEV AAAHAGWRGLCEGVLEETVACFQDDSANLIAWLGPAIGPQAFEVGPEVRDAFIEKDPQAV EAFVACGDKYLADIYQLARQRLNNVGVTQIFGGDRCTFTEKGDFFSYRRDKTTGRMASFI WLI >gi|333596725|gb|GL892087.1| GENE 1167 1296253 - 1297233 911 326 aa, chain - ## HITS:1 COG:STM2662 KEGG:ns NR:ns ## COG: STM2662 COG0564 # Protein_GI_number: 16765978 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Salmonella typhimurium LT2 # 1 326 1 326 326 596 92.0 1e-170 MAQRVELTATVSENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGKIWDKPKEKVF GGEAVAINAEIEEEIRFEPQDIPLDIVYEDDDILVINKPRDFVVHPGAGNPDGTVLNALL HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMT SGGTVEEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHM AHITHPLVGDPVYGGRPRPPKGASDEFISVLRKFDRQALHATMLRLYHPITGIQMEWHAP IPQDMVELIDAMRADFEDHKDHVDWL >gi|333596725|gb|GL892087.1| GENE 1168 1297365 - 1298102 875 245 aa, chain + ## HITS:1 COG:STM2663 KEGG:ns NR:ns ## COG: STM2663 COG4105 # Protein_GI_number: 16765979 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Salmonella typhimurium LT2 # 1 245 1 245 245 437 94.0 1e-123 MTRMKYLVAAATLSLALVGCSGSNEQVPDNPPNEIYATAQQKLQDGNWKQAITQLEALDN RYPFGPYSQQVQLDLIYAYYKNADLPLAQATIDRFMRLNPTHPNIDYVMYMRGLTNMALD DSALQGFFGVDRSDRDPQHARDAFNDFSKLVRSYPNSQYITDATKRLVFLKDRLAKYEYS VAEYYTRRGAWVAVVNRVEGMLRDYPDTQATRDGLKLMENAYRQMQMTAQADKVAKIIAA NSSNT >gi|333596725|gb|GL892087.1| GENE 1169 1298370 - 1298711 558 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA [Enterobacter sp. 638] # 1 113 1 113 113 219 96 4e-55 MTMNITSKQMEITPAIRQHVADRLAKLDKWQTHLINPHIILSKEPQGFVADATINTPNGH LVASAKHEDMYTAINDLINKLERQLNKVQHKGEARRATTSVKDASFAEEVEEE >gi|333596725|gb|GL892087.1| GENE 1170 1298971 - 1300131 1383 386 aa, chain + ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 385 1 281 282 525 92.0 1e-149 MTPENPLLDLRVKISALDEKLLALLAERRALAIEVGKAKLDSHRPVRDIDRERDLLERLI QLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKTNPHSARIAFLGPKGSYSHLAA RQYAARHFEEFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSL VGELTIPIDHCVLVSGSTDLSQIETVYSHPQPFQQCSQFLNRYPHWKIEYTESTSAAMEK VAQANSPAVAALGSEAGGALYGLQVLERNLANQTQNITRFVVLARKAINVSDQVPAKTTL LMATGQQAGALVEALLVLRNHNLIMTKLESRPIHGNPWEEMFYLDVQANLESASMQKALR ELGEITRSMKVLGCYPSETVVPVDPV >gi|333596725|gb|GL892087.1| GENE 1171 1300128 - 1301000 742 290 aa, chain - ## HITS:1 COG:STM2668 KEGG:ns NR:ns ## COG: STM2668 COG3386 # Protein_GI_number: 16765983 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Salmonella typhimurium LT2 # 1 290 1 290 302 513 81.0 1e-145 MAEPQLLLNYTGHLPECPTWSADEKALYWADILEGEIHRYHLPTAEHSVLSLHEEVGCFA LRERGGFIVAMRNAIWLTDKHGLLQRKVCDNPSNPQLARFNDGGTDHEGRFYAGTFWGPG DYNGAMLMRIDNDLTPKVIQCDIHGHNGLAFSPDKRWMFTSDTPNGVIYRTPIDEQGEPG KREEFRRFSEGEGIPDGAAMDEEGCYWSALFDGWRIARFSPQGEQLEEYRLPVRCPTMVC FGGDDMKTLFITTTRENMEAEELAKYPLSGAIFTLPVNVAGMKKSRFIER >gi|333596725|gb|GL892087.1| GENE 1172 1301062 - 1302183 1229 373 aa, chain - ## HITS:1 COG:ECs3463_2 KEGG:ns NR:ns ## COG: ECs3463_2 COG0287 # Protein_GI_number: 15832717 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Escherichia coli O157:H7 # 100 373 1 274 274 517 91.0 1e-146 MVAELTALRDQIDEVDKALLDLLARRMALVAEVGEVKSKYGLPIYVPEREASMLASRRKE AQALGVSPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL SGYQVRILEKEDWSHAPELMKDAGMVIVSVPIHVTEQIIAKLPPLPEDCILVDLASVKNG PLQAMLAAHTGPVLGLHPMFGPDSGSLAKQVVVYCDGRQPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP QLYADIIMSSENNLALIKRYYQRFGEAITLLEHGDKQAFIDSFRKVEHWFGDYATRFQSE SRTLLRQANDSRQ >gi|333596725|gb|GL892087.1| GENE 1173 1302194 - 1303264 1098 356 aa, chain - ## HITS:1 COG:ECs3464 KEGG:ns NR:ns ## COG: ECs3464 COG0722 # Protein_GI_number: 15832718 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 669 92.0 0 MQKDALNNVHITDEQVLITPDQLKAEFPLSVAQEAQIEHSRQTISDIIAGRDPRLLVVCG PCSIHDPETAIEYARRFKALAEEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDV EAGLKIARRLLVELVSMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL SMPVGFKNGTDGSLATAINAMRAAAMPHRFVGINQAGQVCLLQTQGNPDGHVILRGGKAP NYSPADVAQCEKEMEQAGLRPALMVDCSHGNSNKDYRRQPAVAESVIAQIKDGNRSIIGL MIESNIHEGNQSSEQPRSAMKPGVSVTDACISWETTDALLREIHKDLNGQLATRLA >gi|333596725|gb|GL892087.1| GENE 1174 1303744 - 1304280 199 178 aa, chain + ## HITS:1 COG:no KEGG:ECL_03934 NR:ns ## KEGG: ECL_03934 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 17 177 1 161 162 269 80.0 4e-71 MGNAILIALLRLPLALMLFILVTPATAGSFTETDKSVRSIVSGIVSYTRWPALSGQPKLC IYASSHYGQALSSEDIHNPLPYSPVIVHSDREALSARCDALYFGSEPPAKQQEIINQYQG QALLLMSEQNPECVIGSAFCLIIEHDQVRFSVNLDALARSGVRVNPDVLMLARNKKHE >gi|333596725|gb|GL892087.1| GENE 1175 1304357 - 1305493 1009 378 aa, chain + ## HITS:1 COG:STM2672_2 KEGG:ns NR:ns ## COG: STM2672_2 COG2199 # Protein_GI_number: 16765987 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Salmonella typhimurium LT2 # 212 375 1 164 168 242 71.0 9e-64 MTFIWLLLCFASVVTLKQYAQKNLELTGATMSHSLEASLVFNDAVAANETLATLGKQGQF AVAEVLNAHHKRFAWWSWNPADNTDTLGALVNRWLFPLPVAQPIIHNGNVIGEIRLTARD SLISHFIWLSFAVLTGCILFASAVALTITRSLHHGMVAELQNITDVVHDVRTNRNFSRRV TEGRIEEFHQFGEDFNSLLDEMEEWQLKLQAKNAQLLRTAMHDPLTGLANRAAFRNNIAA LMNDASAKTNSALLFLDGDNFKFINDTWGHAAGDCVLIEAAKRMVEFGEKRHQSYRLGGD EFAMILYGVHTAHEVEYICAALSQQFIRPFDLHNGHTASMSLSIGFALAWENASVEALLE QADRNMYLVKNQRSKTIS >gi|333596725|gb|GL892087.1| GENE 1176 1305608 - 1305991 316 127 aa, chain + ## HITS:1 COG:yfiB KEGG:ns NR:ns ## COG: yfiB COG2885 # Protein_GI_number: 16130526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli K12 # 1 127 34 160 160 207 80.0 4e-54 MKSYGFNELNGDWSLGLSDKILFDKNDARLRPESETQIQTMASRLAATGLNHARMDGHTD NYGEESYNEALSLKRANVVADAWAKGANIPRSNLTTRGLGKKYPVSSNHTAQGRAENRRV AVVISTP >gi|333596725|gb|GL892087.1| GENE 1177 1305994 - 1307364 1126 456 aa, chain - ## HITS:1 COG:Cgl2275 KEGG:ns NR:ns ## COG: Cgl2275 COG3182 # Protein_GI_number: 19553525 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Corynebacterium glutamicum # 13 435 33 455 475 234 37.0 2e-61 MTTCTPRAAWGNLLRRLHFHIGLFVGPFIFFAALTGTLYVATPQLENALYHHALHTDAMG EAQPLAEQIAVAENAVGSALRLHAVRPGLEKGETTRVMFADPTLGPSEHRAVFIDPASLE VRGDMTVYGTSGILPLRQTIDYLHTSLMLGNLGRLYSELAASWMWVAALGGIALWFYTRP KRRINNRFQNRRRLHVILGWTLLAGMLLFSATGLTWSQWAGGNVDKLRAEMNWLTPQVNT QLSGAPEMMDEHAEHRGHHGGMTMPEMPVELSLFDSVLQAARQSGIDANKVEIRPGRGAN QAWTVTEIDRRWPTQVDAVAVDPHSLKVLDSTRFGDFPLMAKLTRWGVDFHMGILFGLAN QLLLIAFGVALCVLIIWGYRMWWMRRPATSAANPVQTLCQSWLALPLWGRGVTFLISVLL GLALPVMGVSLAVFIVIDWLRWRAASDMSLAGTSVK >gi|333596725|gb|GL892087.1| GENE 1178 1307403 - 1307807 185 134 aa, chain - ## HITS:1 COG:no KEGG:ECL_03938 NR:ns ## KEGG: ECL_03938 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 134 1 134 134 197 91.0 1e-49 MDNVLHQHSWKRAAALTALFAILLIVVAPLISVSLQKDPMSAMPGMHHDMSMMSMDEHHG EMSHSMPVDHAEACGYCVLLAHVPGVMLALIVLLSAVLQRLRVKPPRQAVSHWHFFPWLY PDTRAPPRRSAFSL >gi|333596725|gb|GL892087.1| GENE 1179 1307940 - 1308287 573 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152971456|ref|YP_001336565.1| 50S ribosomal protein L19 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 115 1 115 115 225 100 6e-57 MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVVDSIAVKRRGAVRKAKLYYLRERTGKSARIKERLN >gi|333596725|gb|GL892087.1| GENE 1180 1308331 - 1309098 470 255 aa, chain - ## HITS:1 COG:ECs3470 KEGG:ns NR:ns ## COG: ECs3470 COG0336 # Protein_GI_number: 15832724 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 476 96.0 1e-134 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGM LMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVARFIPGVLGHEASATEDSFADGLLDCPH YTRPEVLEGMEVPAVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQAKLLAEF KTEHAHQQHEHDGKA >gi|333596725|gb|GL892087.1| GENE 1181 1309129 - 1309665 198 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 7 173 2 160 179 80 30 2e-13 MSNKAPVEPIVLGKMGSCYGIRGWLRVFSSTEDADSIFNYQPWFIQKAGKWEEVELESWR HHNQDIIIKLKGIDDRDAANALTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYSL GKVIDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLATQTIEVDWDPGF >gi|333596725|gb|GL892087.1| GENE 1182 1309665 - 1309694 45 9 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|213022766|ref|ZP_03337213.1| 30S ribosomal protein S16 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] # 1 9 81 89 89 21 88 2e-32 KQLNLSRWS >gi|333596725|gb|GL892087.1| GENE 1183 1309684 - 1309932 401 82 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152971459|ref|YP_001336568.1| 30S ribosomal protein S16 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 82 1 82 82 159 96 6e-37 MVTIRLARHGAKKRPFYQVVVTDSRNARNGRFIERVGFFNPLAAGAEEETRLDLDRIAHW VGQGATVSDRVATLIKAANKAA >gi|333596725|gb|GL892087.1| GENE 1184 1310069 - 1311430 1903 453 aa, chain - ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 788 97.0 0 MFDNLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKEKAV GHEVNKSLTPGQEFVKIVRNELVSAMGEENQVLNLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVAQKPVDIVNAALKEAK LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV LSLIEDIESKVDRAQAEKLASKLKKGDGFDLTDFLEQLRQMKNMGGMASLMGKLPGMGQI PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF DDMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR >gi|333596725|gb|GL892087.1| GENE 1185 1311597 - 1312388 886 263 aa, chain + ## HITS:1 COG:STM2678 KEGG:ns NR:ns ## COG: STM2678 COG4137 # Protein_GI_number: 16765993 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 261 1 261 263 409 90.0 1e-114 MPVFALIALVAYSVSLALIIPGLLQKNSGWRRMAILSAVIALVSHAFALESRIIPGDGSV QNLSVLNVGSLVSLMICTVMTIVASKNRGWLLLPIVYAFALINLALATFMPNEFITHLEA TPGMLVHIGLSLFSYATLIIAALYAMQLAWIDYQLKNKKLAFNHEMPPLMVIERKMFHIT QVGVVLLTLTLCTGLFYMKNLFSVENIDKAVLSIIAWFVYIVLLWGHYHEGWRGRRVVWF NVAGAGILTLAYFGSRFIQQFAG >gi|333596725|gb|GL892087.1| GENE 1186 1312453 - 1313694 1440 413 aa, chain + ## HITS:1 COG:STM2679 KEGG:ns NR:ns ## COG: STM2679 COG4536 # Protein_GI_number: 16765994 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Salmonella typhimurium LT2 # 1 413 1 413 413 714 90.0 0 MVVISAYFSGSETGMMTLNRYRLRHRAKQGNRAARRVEKLLRKPDRLISLVLIGNNLVNI LASALGTIVGMRLYGNAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL LILMMPLVWLLNMVTRVLMRMVGIKADVTISSALSKDELRTIVNESRSQISRRNQDMLLS VLDLEKVSVDDIMVPRNEIVGIDINDDWKAIVRQLTHSPHGRIVLYRDSLDDAISMLRVR EAYRLMTEKNEFTKEVMLRAADEIYYVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGL VTVEDILEEIVGDFTTSMSPSLAEEVTPQNDGSVLIDGSANIREINKAFNWHLPEDEART MNGMILEALEEIPAAGTRVRIEQYDIDILDVQDNMIKQVKVLPIKPLRESIAE >gi|333596725|gb|GL892087.1| GENE 1187 1313746 - 1314339 831 197 aa, chain - ## HITS:1 COG:ECs3476 KEGG:ns NR:ns ## COG: ECs3476 COG0576 # Protein_GI_number: 15832730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 292 89.0 3e-79 MSSKEQKTPEGQAPEEIITEQHDEVEAVEPDTSAEQVDPRDEKIANLEAQLVEAQNRERD GVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDNAAMI EGIELTLKSMLDVVRKFGVEVIADTDVPLDPNVHQAIAMVESEDVTAGNVLGVMQKGYTL NGRTIRAAMVTVAKAKA >gi|333596725|gb|GL892087.1| GENE 1188 1314462 - 1315340 833 292 aa, chain + ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 1 292 1 292 292 595 96.0 1e-170 MNNHFRCIGIVGHPRHPTALTTHEMLYRWLCGKGYEVMVEQQIAQELQLKSVRTGTLAEI GQQADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGH YISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINGDSTIRLRFSHRRNDL EISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSSKLGWSKKLF >gi|333596725|gb|GL892087.1| GENE 1189 1315426 - 1317087 1822 553 aa, chain + ## HITS:1 COG:STM2684 KEGG:ns NR:ns ## COG: STM2684 COG0497 # Protein_GI_number: 16765999 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Salmonella typhimurium LT2 # 1 553 1 553 553 887 87.0 0 MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEGDMVRTGAA RADLCARFSLKDTPAALRWLEANQLEDGRECLLRRVISSDGRSRGFINGTAVPLSQLREL GQLLIQIHGQHAHQQLIKPEQQKALLDGYAGEYALTQLMAEHYRQWHQSCRELAQHQQQS QERTARAELLEYQLKELNEFNPQAGEFEQIDEEYKRLANSGQLLSTSQNALNMLADGEDV NLQSQLYNVRQLVTELTGMDNKLSGVLEMLEEAAIQISEAGDELRHYCERLDLDPNRLFE LEQRISRQISLARKHHVTPEELPNYYQSLLEEQQQLDDQADSLETLSLAVNLHHQQALET AKRLHDVRQHYAQELSQHITDSMHTLAMPHGVFTIDVRFEEHHLTAEGADRVEFRVTTNP GQPLQAISKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHHHFIVSKETDGEMTETHMKPLDKRSRLQELARLLGGSEVT RNTLANAKELLAA >gi|333596725|gb|GL892087.1| GENE 1190 1317226 - 1317564 435 112 aa, chain + ## HITS:1 COG:STM2685 KEGG:ns NR:ns ## COG: STM2685 COG2913 # Protein_GI_number: 16766000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Salmonella typhimurium LT2 # 1 112 1 112 112 200 92.0 5e-52 MRCKTLTAAAAVLLMLTAGCSTLEKVVYRPDINQGNYLTPNDVSKIRVGMTQQQVAYALG TPMMSDPFGTNTWFYVFRQQPGHEDVTQQTLTLTFSSAGVLTNIDNKPALTK >gi|333596725|gb|GL892087.1| GENE 1191 1317625 - 1317912 306 95 aa, chain - ## HITS:1 COG:yfjF KEGG:ns NR:ns ## COG: yfjF COG2914 # Protein_GI_number: 16130537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 4 94 10 100 102 133 83.0 8e-32 MSHKIAVEVVYALPEKQYLQRVMLEEGATVEAAILASGILELRSDIDLAKNKVGIYSRPV KLGDVLKEGDRVEIYRPLIADPKELRRQRAEKSGK >gi|333596725|gb|GL892087.1| GENE 1192 1317902 - 1318378 587 158 aa, chain - ## HITS:1 COG:ECs3481 KEGG:ns NR:ns ## COG: ECs3481 COG2867 # Protein_GI_number: 15832735 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Escherichia coli O157:H7 # 1 156 1 156 158 276 87.0 1e-74 MLLFVCCVTMENAMPQISRTALVPYSAEQMYQLVNDVQSYPEFIPGCTGSRVLESGPTQM TAAVDVSKAGISKTFTTRNTLTSNQSILMHLVDGPFKKLMGGWKFTPLSADACRIEFHLD FEFTNKLIELAFGRIFKELASNMVQAFTTRAKEVYSVA >gi|333596725|gb|GL892087.1| GENE 1193 1318496 - 1318978 591 160 aa, chain + ## HITS:1 COG:STM2688 KEGG:ns NR:ns ## COG: STM2688 COG0691 # Protein_GI_number: 16766003 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 160 1 160 160 292 93.0 2e-79 MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKD GEAFLFGANFTPLTVASSHYVCDPTRTRKLLLNKRELESLYGRINREGFTVVALSLYWKN AWCKVKIGVAKGKKQHDKRTDLKAREWQLDKARIMKNAGR >gi|333596725|gb|GL892087.1| GENE 1194 1320154 - 1320789 684 211 aa, chain - ## HITS:1 COG:STM2755 KEGG:ns NR:ns ## COG: STM2755 COG0269 # Protein_GI_number: 16766067 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 362 95.0 1e-100 MKLQLALDELTLPEALAFIDKVVDDVDIIEVGTPFLIREGVKAIKAIKEKYPHKEVLADA KIMDGGHFESQMLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARV RLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKARRKARIAVAGGISSQTVKDYTLLG PDVVIVGSAITHSADPADEARKISQVLLQHH >gi|333596725|gb|GL892087.1| GENE 1195 1320813 - 1321376 558 187 aa, chain - ## HITS:1 COG:STM2756 KEGG:ns NR:ns ## COG: STM2756 COG0794 # Protein_GI_number: 16766068 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Salmonella typhimurium LT2 # 1 187 1 187 187 302 93.0 3e-82 METQSVAGVACSDLHQAMARIDGAALARLEQAIADANAVFVFGAGRSLLMLKAFAMRLMH IGLKVYVVGDVVTPALQKGDLLLLASASGETASLVNVSIKAKQLGGTAALLTIFPESTLG KLAEVVVRIPAYTDKLPDGPENVKGILPGGSLFEEAVMVLGDAMIVNLAQSTGYHITKGF ALHANLE >gi|333596725|gb|GL892087.1| GENE 1196 1321376 - 1322218 1100 280 aa, chain - ## HITS:1 COG:STM2757 KEGG:ns NR:ns ## COG: STM2757 COG2140 # Protein_GI_number: 16766069 # Func_class: G Carbohydrate transport and metabolism; R General function prediction only # Function: Thermophilic glucose-6-phosphate isomerase and related metalloenzymes # Organism: Salmonella typhimurium LT2 # 1 280 1 280 280 544 93.0 1e-155 MKQLHHSGLPLYLDDDGVMALKPPLNYLGFGRKNAGQMAVVLPEFTEAQRDEPAYDVYRG LSFAEDQERLSADQYQYDITIIMPGTIGRERKKTSGHYHGYNDTRRNTHPEVYEVIKGTA AYILQKSPDFAAPPKDLLVDDLIVAVVKEGQSIIVPPNYGHCSINIGDGPLVFSNLAYKP CAVHYDTVQFYHGMACYIVEENGQLCVRKNRYYSHIPRIKFATVKENPHLGITFDTPLYQ RYRAAPERFHFLGHVDNYVREIMGMLEYQDDLFPLCQEDA >gi|333596725|gb|GL892087.1| GENE 1197 1322215 - 1323675 1787 486 aa, chain - ## HITS:1 COG:STM2758_1 KEGG:ns NR:ns ## COG: STM2758_1 COG1263 # Protein_GI_number: 16766070 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Salmonella typhimurium LT2 # 1 408 23 430 430 740 97.0 0 MLPAAGILLAFGVSFQDPNIVASLPFLGADWLVHVLKLMAEAGSAIFANLPLLFAVGVAV GLSDDQGIAGLSAIAGFLIMNVTIGQFLGITPESVAQVRDYTMVLGIPSLQTGVFGGIII GIIAAWLYKRYYRIQLPSWLEFFSGKRFVPIVTSFAALFVGLVMAVVWPPVQHLINGLSN TMTVQGPGVSAFLFGFVERLLIPFGLNHVWWPTFWLQFGEYVNKAGQVVHGDQLIFFAQL KDQVPITAGTFMAGLTPIKMFCIPAIALAIYRCASPENRARVKGIMLSGAITSIVCGITE PIEFSFLFVAPVLYGIHAVLAGLVFLLMEWFSVHIGLSFSGGLIDYLFFGVLPRAPHWYM VFPVGLVMGVVYYILFTFAIRRWNLLTPGREVEERTVTQENEQNDLVSGIILAYGGLGNM TSIEACMSRLRIDVTDKTLVDKALRKQLGAAGVVEVGNNIQSVFGMKSDRLKEAIRAANA YTQEAK >gi|333596725|gb|GL892087.1| GENE 1198 1323963 - 1325642 1398 559 aa, chain + ## HITS:1 COG:STM2759 KEGG:ns NR:ns ## COG: STM2759 COG4533 # Protein_GI_number: 16766071 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 559 1 559 559 1088 95.0 0 MSIFEAHFRRLHARYGVDQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGR GKRSRLHLLTSPEKLFSQNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSET RVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAVQGRIVPDIAHYWTHNDDFTR WEFWLKSTARFADGSELDASAVQRCLLAASHSPQFAPLFSPIKTITADAPWHLVIETHHP VRRLDCLLATQPTMLFDYHHGRIRCTGAFYLHQHSDNFMVLRRNQHWHQARPGLDEITIF TWAPEHISMSFIPLLRGEEAQDDRPLSERSLEQGCCFVLPDSDGVFADETGRRFINYLLQ PVELLSQTQLPDEYARILSVAQGMLPQWNHRPVDFGGVTAPFNLRQPVIISTFQQPELVE LAGAIRRLLERWHIRAEIRIDAFDHFNSQPCPPADIWLSNFMLDTLSVPAFLEWLASTAL FTRLPEAQRRNLNALLPTILNSDDEQAFASIADFFHEITHQRYVIPLLHHWMEFATEKSF TWRDLNTLGWPDFSQLWLE >gi|333596725|gb|GL892087.1| GENE 1199 1327362 - 1327601 138 79 aa, chain - ## HITS:1 COG:no KEGG:t0349 NR:ns ## KEGG: t0349 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 75 13 87 229 149 94.0 3e-35 MAKFYVYAFYDTEDVSKKPFYIGKGKSERCLDHIKCNDGSPKSERINHLLKTGNLGIDIL RHGMDEATAKLVEATWLAS >gi|333596725|gb|GL892087.1| GENE 1200 1327849 - 1328076 89 75 aa, chain - ## HITS:1 COG:msl4947 KEGG:ns NR:ns ## COG: msl4947 COG3813 # Protein_GI_number: 13474133 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 1 74 1 74 84 90 66.0 6e-19 MLELRPNCECCDKDLPPESKEAFICSFECTFCVDCVTQRLNGRCPNCGGELVRRPIRLEA SLLRHPASSQRHYKQ >gi|333596725|gb|GL892087.1| GENE 1201 1328854 - 1330092 837 412 aa, chain + ## HITS:1 COG:STM3547_2 KEGG:ns NR:ns ## COG: STM3547_2 COG0524 # Protein_GI_number: 16766833 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 101 399 2 300 312 285 49.0 1e-76 MLNKERHYAILTWLNRYERATVNQLAKVFNVTRETIRSDLNLLAQEGGIERCHGGAIIKR RIFHTQSVNNLDSNIIHFFDSAQSKKTIKSRHKGRKMKGKVCILGSFNVDIIANVDRFPQ SGESIFSENTIIGPGGKGANQALAVSKCNVKTHFVGKVGNDQFSQMAFEHLSSSAIDSFT LYQDKDQKTGTALIYVCQSDGENMIAISPGANRSITADEVEAITPEVKNSDIFLTQLENN LPATFRAIEIARRNGIKVVLNPAPWSSDVVSCLKNVDFLTPNETEASLLSGIHIMDLASA KDAARAIKAMGVGHVIITMGAKGALIYDGEQFIHIPALKAVCVDTTGAGDAFNGAFAAAM AKGESIIQAAKFACAFASLAVEKEGASNMPEYKDVLTRLAQYNDKNILTEKL >gi|333596725|gb|GL892087.1| GENE 1202 1330160 - 1331137 1175 325 aa, chain + ## HITS:1 COG:BH0484 KEGG:ns NR:ns ## COG: BH0484 COG4209 # Protein_GI_number: 15613047 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type polysaccharide transport system, permease component # Organism: Bacillus halodurans # 24 325 18 325 325 243 42.0 3e-64 MKALTESKPGGVIPQANNLPHPQTLSRMARCRQKLRRWWPFYMMALPGVIYFFIWHYLPI WETKIAFEQYRIIPPNIWVGMQYFATLMSSPVFWQVIQNTVIIGAMKLIFIFPVPIIVAL LLNEVRSSGYRKFVQSVIYLPHYLSWVVIASIAIATLSPVDGAVNDIIKSMGYDPIPFMT DSGSIRWVLVFTEMWRSAGWDSLLYIAAILAIDPQLYEAAEMDGAGRWRKIWHITLPAIT PTIATLFILNVGLFLSQGFDQVFNMTNDVVNGQIDIIDTYVYRMGLRTGEFSLATAAGLF KGVIGMILIVLAHNVSKRLTGKGVW >gi|333596725|gb|GL892087.1| GENE 1203 1331137 - 1332036 1210 299 aa, chain + ## HITS:1 COG:BS_lplC KEGG:ns NR:ns ## COG: BS_lplC COG0395 # Protein_GI_number: 16077779 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 28 299 30 295 295 191 38.0 2e-48 MRISSRSTPFERIEYVLILSVLMLLVVVTLQPILNLVAISFSSPANVPDMSGLDIIPQGF SLDVWKLLLTNEAVLRGFGNAMLITVVGTVINVVFTVLLAWALAQKRLPGRRWLFMFVLF TIVFEPGIIPDFLVMKKLGLLNSYWSVILYRAVFAWYLIILVRLFEEIPEELLEAAELDG ANPFQTLWYVIMPVAKSSIAMITLFYMVLHWNEFFRAMVYLNDPDKWPLQVVLRQFVVEG DKLAMVGVESMSNYTDASQISIKALKAGMITLTIAPLIAIYPIILRFFTKGTMSGAVKG >gi|333596725|gb|GL892087.1| GENE 1204 1332051 - 1332404 595 117 aa, chain + ## HITS:1 COG:no KEGG:Spirs_3329 NR:ns ## KEGG: Spirs_3329 # Name: not_defined # Def: sugar ABC transporter periplasmic protein # Organism: S.smaragdinae # Pathway: not_defined # 22 117 35 131 467 95 44.0 7e-19 MKLFTAIACGLLLCQTALAEPVTIRIVEKDLLTTNREDVAHIRRIEQALARQGHDIHIEI VNLSSSGYSDVLNVMLLSGTIPDLIYFNGSDQKMVEQGILEDWRPWIAQTRYLKEAL >gi|333596725|gb|GL892087.1| GENE 1205 1332477 - 1333451 979 324 aa, chain + ## HITS:1 COG:BH0482 KEGG:ns NR:ns ## COG: BH0482 COG1653 # Protein_GI_number: 15613045 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 321 173 506 512 70 22.0 6e-12 MIREDWLQKSGFSASPKTLAEYVTLFNAIHAGDYNGDGKTDSWGITSEKDLRDLDGFMNP AFGIHATWLKDDQGKLINAQISPQERSKLEFYHSLYQKGLLSSQYITTNWELKEDEFYTG KVGVVSVSSPGNVGVYQEKMRQIHPDATLTLLDPPEGPAGKGLAATDVSMETRGFAMSSL SKHKKEVMILLDFLASPEGQMMEQMGFENTHYVRQGDTISVTPKINAWYPRFIQAANWKP PVEWRTPAMLRYIDNSQRYFRADNAFIFPASFAAAIDSTSSIYNQWAYQFVSGKASFDKW DQYVSAWKAAGGNAMTEYAEEKLK >gi|333596725|gb|GL892087.1| GENE 1206 1333448 - 1334659 1265 403 aa, chain + ## HITS:1 COG:STM2143 KEGG:ns NR:ns ## COG: STM2143 COG1397 # Protein_GI_number: 16765472 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Salmonella typhimurium LT2 # 14 373 5 330 334 66 26.0 9e-11 MTVTQTADLSFTSRILGMLYGVAFGDALGGPVEKLSARQIAEKYGRVTSIHQRWHRMDEP SARRNNRVRGNGIITDDTLMTLCLMEVYSELGRHVDAWDMGESFVRKIAWEPRWVPELDR EALVIERLFYPEKWIFHRLQLAACDPRQGGVGNMVNCGAAMYAAPIGAINACNPEAAYQE AINFTQGHQQSYGLEAAGVFAACVAAAFIPGITVETITDIALKLAKDGTRQAIAATLDVA RRYRGAAWDYQQVVDALHEALLPFSPMGDDLMHGPEKAGVPTMAYQPSRLMSIEELPMAL AFCLLREGEFRGAVEDSINSGRDTDSIGVMSGAILGALHGEAIIEPEVLAGIDSANRLDL RTAALRFSESAHRIIQTDLAAAALYRQHVMPLLQPGHTAGRGE >gi|333596725|gb|GL892087.1| GENE 1207 1334661 - 1335716 1273 351 aa, chain + ## HITS:1 COG:AGc4558 KEGG:ns NR:ns ## COG: AGc4558 COG3839 # Protein_GI_number: 15889773 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 349 1 352 352 384 55.0 1e-106 MSQIVLNNLGKSYGNVSIIKGISLSIHEGEFIVLVGPSGCGKSTLLRMIAGLEDITSGEL LMHGEVVNTLPAKKRDIAMVFQSYALYPHMKVRDNMSFALKLASVSKAERMARVEEAAEI LGLTHLLDRLPRDLSGGQRQRVAMGRALVRDPKAFLFDEPLSNLDAKLRHKMRGEIRKIH QRMGRTTIYVTHDQTEAMTMADRIVVLNAGHIEQVGTPEELYRDPDNLFVAGFIGTPEIN TLKGVIQHGEIVLNNGYRFPCPLSAHIEGMEIICATRPHYIRIGDSGMPAEIVLIEMTGE GQEIRVRIHDQELIVVSHEKLDINVGQQVFLTVDTAKIFLFDARTGKRLRS >gi|333596725|gb|GL892087.1| GENE 1208 1335814 - 1337130 882 438 aa, chain - ## HITS:1 COG:AGpT48 KEGG:ns NR:ns ## COG: AGpT48 COG0154 # Protein_GI_number: 16119822 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 432 21 457 467 166 31.0 7e-41 MMRLIPSEDCPEEIARRLDAIQQHRALNAILGVNPDALSLAKQYQQLARQGVQIGPLHGV PVIVKDNIACAPMPVTLGCRALASLAATSDARVVQRLRGAGAIILARANMSEFAFDVRSR SSLGGDVANPLCPSVTAGGSSGGCAAAVAAGMADGALGTDTGGSVRIPCSYTGLVGLRPT FRRAQLDGVAPLSPSKDTVGPMVHSVEDAALLHAVIHGLPPVALPARSLKGVRFGVVTAL QGEDEVQLEVWQSALDTLRRAGATLVAVSLPFLEEVRQATCLSLYEFRVAIDGWLSKQPG APSGLTDIVASGAFLPEFAPFLRQMLTCDTLKTPLWLAGRRFQRLLRQNLRRVAEAQRID GFLYPTVQRLPDSLAKMPPGCAPELAAISGLPAITLPCGVSRIGLPVGMEMLSVQEDETV LMTLALACERALGGECKI >gi|333596725|gb|GL892087.1| GENE 1209 1337183 - 1338478 1509 431 aa, chain - ## HITS:1 COG:mlr6649 KEGG:ns NR:ns ## COG: mlr6649 COG0141 # Protein_GI_number: 13475550 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Mesorhizobium loti # 8 418 69 484 500 384 48.0 1e-106 MLNQVSWIKHPQGQDVQADRSLTETVRAIIERVKSEGDAALRAFSQQFDKVVPAQFEVSE QEIADALEGMDAQTRRDSEFAINQVRRFAQAQLATMQPLETETLPGVHLGHRIIPVQTVG CYVPGGRYPILSAPVMSIVPATVAGCEQIIACLPPGAHPAMIAVCHLAGAHRIFKVGGAQ AIAAMAWGTESIPSVDKIVGPGNAFVNEAKRQVFGKVGIDALAGPSEIFTIADDSADPRI LAADMLAQAEHDIHTRVGLATTSRDIAERTLAEVERQLASLPTAATAGEAWRRQGEIVLC EDEAQLIAFADHMATEHLQVHTRDPHATAAKIRNYGSLFIGQNASVVFSDKCCGTNHTLP TMAAARYTGGLWVGAYVKICTHQWIDEQGIPAIAEPAIRQSRTEGMQGHRQAAEIRLRPQ DIDAITTGLRD >gi|333596725|gb|GL892087.1| GENE 1210 1338479 - 1339621 1174 380 aa, chain - ## HITS:1 COG:no KEGG:Smed_4298 NR:ns ## KEGG: Smed_4298 # Name: not_defined # Def: hypothetical protein # Organism: S.medicae # Pathway: not_defined # 25 377 22 377 392 565 71.0 1e-159 MSSTEATNKAPAVPERSSVKALKEEPVLQVERRDFVDLVPEKRPRVQSLRGFDDCYTDIV DYIVRCTHKIWDERDVGLIYSHYTHNCVLYNALGTLYNREQVVQDTLQRLIAFPERRGMA TQVIWNGNDVDGFYTSHLVTGSGRHTQHSHLGKPTNRTFVTRTVADCMIHENKIYREWVV SDNMSLMKQLGLNTDQIAFNMAKEQFDKGFRVMDIGENGRMLGQYPPEMECDVSIAHTDT EEQCLRWLHEIYNRRMFGKIKEVYAPNVQWHGPLMKELYGTAAVTHQTLALVGMIPDGAW LPQHICSNPCDEGGVKVAVRWIIEGHHLGYGELGKPTGERLFVMGMSHYHIVNGKIVDEW VVYDHLALLAQIKLGQMEDA >gi|333596725|gb|GL892087.1| GENE 1211 1339728 - 1340699 947 323 aa, chain - ## HITS:1 COG:no KEGG:RD1_3943 NR:ns ## KEGG: RD1_3943 # Name: not_defined # Def: hypothetical protein # Organism: R.denitrificans # Pathway: not_defined # 4 322 1 318 322 167 32.0 6e-40 MTRLRGFSPQFDSIQQFILTLTHVVWEQKDIGQLADFYAMPVVFTTPEKQLHELSQFMRL TLEAMHSFPQRAVLTEDILCSQNPGDEYYAAQRTVARIQHQGEGFFGPPTGKNVWVRTWA DRICVDGAVRQEWLLQDRAAIVAQLGLDVREFAVNLATMRQQLGVEMVSAETLDARWAGG PEGDDVEGALAGVVERYLTMWAGGNSGVVPGLYHPAATLYAPGHCICTGEQDIGAQLSGY RASFADSETQLHHLIVRKDPHEPIRLSLRWSLLTWHDGYGKFGAPTRKPISITGISQLEL RDGLIFREYLGIDELAIWSQIVN >gi|333596725|gb|GL892087.1| GENE 1212 1340696 - 1341766 1032 356 aa, chain - ## HITS:1 COG:VCA0673 KEGG:ns NR:ns ## COG: VCA0673 COG1609 # Protein_GI_number: 15601431 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 7 333 13 339 343 215 37.0 1e-55 MKRKTFAAVTSQQVAQLAGVSQSAVSRTFTPGASISPATREKVLKAARELGYRPNAIARS LNTARSRIIGVVISYFDNPFYSQVLEALAQKLDTLNYHLLLFVGDREGNVDRIFDQIMQY RVDGIVLASVTLSLELSEECLAAGIPVVLFNRSEESGMASSVNSNNEAAARQIAEFLLAG EHQRFAYVGGVADSPVNIARQRGFISTLEEHGITDVRVVHGNYDVQQTTRAAYALFSASP APDAVFVANDHMAVTVMDVARYEFGLRVPEEVSVVGYDDIGPSGWPSYALTSASQPVGAM VDATVELLMKQIDSGTIEPEQITVPGTLVIRHSARRPRSGVIETNGLTLFQSRERK >gi|333596725|gb|GL892087.1| GENE 1213 1342075 - 1343313 1566 412 aa, chain + ## HITS:1 COG:BH2311 KEGG:ns NR:ns ## COG: BH2311 COG0477 # Protein_GI_number: 15614874 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 9 380 8 376 391 94 22.0 3e-19 MFRALLRRREARLFFIISILFFICIHSIDAFLAPMMINQGIEPQIMGIIMGASGLATLLI RFPLGIISDVVKSRRIFIQIGLLLPIIAWPIAWLEPNALTLYLAKAADGVTAATWVLYNI LFMRYFDRSEAPAAVALLALAGPIGVFLGNCIGAVLIHYFANNIAFFVSCISALVALFLT TRIKDVHDPVQAPTLKACITGARQQLADRSVWLIGILATVVILVPFATRDTLTPVYAEQL GARAGILAVLGNIHLLFYGLAIALCSSVFYQRLGLVKTAVLGIALQVISTFGIPFTSNMY VIYLWQALAGFSFGMAFAAFMSLSVVNTTADEQSTRMGLFQTIYSCGMFAGPVMMGVMMQ HINLSSGYLLIAALSVVAAIATPLSARWIYARKAQTSSQLLKNGAYAAAPDQ >gi|333596725|gb|GL892087.1| GENE 1214 1343389 - 1344711 1362 440 aa, chain + ## HITS:1 COG:mlr6649 KEGG:ns NR:ns ## COG: mlr6649 COG0141 # Protein_GI_number: 13475550 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Mesorhizobium loti # 17 437 80 500 500 593 66.0 1e-169 MSFKLKTGKSTEERQQANQQIRETVEHILADIEKRGNKAIRELSIKFDRYDRQDYRLSPA EIDRCIKQLSRQDIQDIEFAQQQVANFARAQKACLRDLEIETRPGVILGHKNIPINAVGC YVPGGKYPLLASAHMSIITASVAGCSRIISCAPPFNGQPAPAIVAAQKMAGATEIYALGG IQAIGAMALGTDSLAPVDMLVGPGNAFVAEAKRQLFGRVGIDLFAGPTETLVIADDTVDA EICATDLLGQAEHGVTTPAILLTNSLSLANETLSEVERLLEKLPTADIARQSWRDYGEII VCDSYEEMLLEADRIASEHVQVMTDRDDWFLANLTNYGALFLGPRTNVAYGDKVIGTNHT LPTQKAARYTGGLWVGKFMKTCTFQKVLSDEATAEIGSYCSRLSLLEGFAGHAEQANIRV RRYGKTEVPYATPAPVREKV >gi|333596725|gb|GL892087.1| GENE 1215 1344715 - 1345479 847 254 aa, chain + ## HITS:1 COG:SMc02037 KEGG:ns NR:ns ## COG: SMc02037 COG1028 # Protein_GI_number: 15966302 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Sinorhizobium meliloti # 9 252 6 254 256 156 40.0 4e-38 MTLLQTPSFTLHGKRALVTGGSKGIGFAAAVALAQAGAEVWIAARHRDALDGAVALAAAH QLSLHPVVLDITLTDDVERVLATLPEFDILVNSAGLARHQPFLEVSEENFDAVMALNLRA TFFISQRVARNMRAGGKEGSIIHISSQMGHVGGPERSVYCASKFALEGLTRTMALELGDA GIRVNTLCPTFIETDLTRASLADPAFRRYVLDNIKLRRPGTLEDIMGPVVFLASDAAGLI TGSALMVDGGWTAT >gi|333596725|gb|GL892087.1| GENE 1216 1345488 - 1346231 599 247 aa, chain + ## HITS:1 COG:CC2763 KEGG:ns NR:ns ## COG: CC2763 COG0596 # Protein_GI_number: 16126995 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Caulobacter vibrioides # 4 237 26 259 261 104 32.0 1e-22 MEYPLLDNTDLPLVLLGGTLCNARLWQPVIERLNVSAVLCITLTGAESAPQASQRLLSML PPRFLLAGFSLGAIVALQIAADAPERVNGLTLISVNPLPVAPDTLASRREAVRTAQARGL ADWLVSSLWQRYVAPSRLSDRFLQEIICRMAQACGIETFAEQTEMAIHRQDNRAAFNALA CPTLLLNGAQDVICTPHHHHVLAAGNANVTWHTVETGGHFIPLETPDEVAPLLRQWITEC IQCAITH >gi|333596725|gb|GL892087.1| GENE 1217 1346306 - 1347004 748 232 aa, chain + ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 5 231 35 261 263 152 42.0 5e-37 MGHQGYDAVTIDLQHGMIDFASALTMLQALSATPAVPLVRVADNDPAHIMRVLDAGAYGV ICPMISSAEEARRFVAACRYPPLGIRSFGPARGLLYGGSDYPQHANDAILTLAMIETREG LENLDAILDTDGLDGVFIGPNDLSLTLTGSASAESQHPEMVAAIERVIVRCRQQQKIAGI FCTSGAAAAARIAQGFQFVTPANDVMQLGRASREAIALARGTAIPSTGASGY >gi|333596725|gb|GL892087.1| GENE 1218 1347016 - 1348191 1065 391 aa, chain + ## HITS:1 COG:no KEGG:Dshi_3139 NR:ns ## KEGG: Dshi_3139 # Name: not_defined # Def: cupin domain-containing protein # Organism: D.shibae # Pathway: not_defined # 6 375 4 370 376 349 48.0 1e-94 MKAIHLTQSQARTRLIAPEDMVSCNLAFIDCRLPGSHLKQNYSFIGPGVTQSTEQVVNIP EPHGFNIGAAAMPKGVTNNLHLHFTAEVFLIHEGTWRFRWGAHGEHEAEFSAPAILSIPT WIFRGFTNVSKEDTCGMVFTVLGGDNTGGIIWHPSVLAAASEYGMYLSKDNMLIAQEVGE PTPDPATLLTPLSEEYIAGLRDYSVEEMRQRAITGDDRRWSAQGLLDSVLPGHGGEIAPV IGFGISQDRNSAPAITAPHGFSVEWLRLADNHIVGRHLCPDIQVIMVFKGQLEVTWNEAG KEVRIIAPERSVISIPANSWRSYRAVDGNVEFILTTRGDQRKRLYWDETILHEAREYNRC LDPDGYVADADILPATARRAGEKIEKVPAAN >gi|333596725|gb|GL892087.1| GENE 1219 1349058 - 1351151 1443 697 aa, chain + ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 167 429 807 1047 1052 107 32.0 7e-23 MSQISVISKLTGVETTTEGTQITLDHSSIVKLNVDRADISDYSRSGNDLVITLHSGEVIT LKNFYVTDAQGVSQLVLEESDGALWWIEDPTGAATYESIASTDALLAASGSDTGGAAAWP WVLGGLAVAGGIAIAAGTGGGGGGDDDNNSPNPGNPGNPSGPDTTPPDAPTNLQVSPDGK TVTGTAEPGSTITLKDADGNTIGTGKAGNDGKFTIDLGTPLTNGEQITATATDPSGNTSQ GGQVTAPDLTAPDAPANLEVSPDGKTVTGTAEPGSTVTLKDADGNTIGTGKADSDGKFTI DLGTPLTNGEQITATATDPSGNTSPGVQVTAPDSTSPDAPEIVTVNDNVGTETGPLSNGQ RTDDARPTFSGISEAGTVITFYDNGKPIGTTTADATGKWSFTPSTNLSEGNHAITTTATD AAGNTSPASTAVTFVVDTVAPGAPAIVSINDDVAPGTGTLGNGSSTNDPRPQLTGTAEAG STVTIYDNGIAIGTAVVGSNGSWSFTPSVNLSEGSHQLTVRATDVAGNTGPASPVFTVTV DVTAPQTPAGFIINDDTGVLKGAIGAGQFTDASEPRLTGRGEPGSTITVYDNGAVIGTTT VLPNGTWSITPTSPLAEGAHSITLRETDAAATRAACLSRSTLPSILRRQTCRRRRSTPQA PRSPVPPSRAAQSSSPTMPGCKSAPRLPTATATMSPT >gi|333596725|gb|GL892087.1| GENE 1220 1351007 - 1360480 9978 3157 aa, chain + ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 5 238 814 1043 1052 114 33.0 4e-24 MPEATLNSTGTQITGTAEPGSTIVITNNAGLQIGTATADSNGNYVANLNPAQTNGEIISV VASDAAGNQSSPALVNAADITPPAAPGNLVVADDGASVSGTAEPNSTIIIKAPDGTIIGQ DTAGPDGTFTIPISPAQTNGEALEVTATDGSGNTSPSGFADAPDSTPPLAPENVVISADG TTVTGTAEPGSTVTIRENGVKVGEAVADDQGNFSVDLIPPKANGEALTADATDTAGNTGP TAPFDAPDITAAQTPVITGVVDDAPDVTGPVSQNGLTNDSTPTINGTGEPGTTITLYSGT TEIGTGTVGPDGQWSITLTTALPDGGHVLTATAVDANNNLSGTSNTWSITVDTAAPGAPA ITQVIDDVPGRTGALDTNETTNDTLPTLNGTGEPGSTVTIRLDGQPVGTALVNSGGAWTF TPTTPLVNGEHTFTVVAIDAAGNASATSAGFTLTVDTTPPPAATIDTVSDNIGPVQLPLN SGDTTDDTLPQLQGTAPDGTTITIYDGTTLLGTAVLDGNGGWSFTPTTPLTDGPHSLTVH ATDNAGNTTISPPFELAIDTTAPATPDIPEITVNPDGGTPGTALNPGETTRDTTPTLSGS GTPGDTVNIYDGATKIGEADVGEDGTWSWTPEDPLPDGTYDLSLTVTNQDSAGNESAPST PVTITIDTDAPAQPGTPTVTDSVSQITGPVLDGESTNDPRPVLSGTGTPNDVITIYDQVG TGEPQAVGSVTVDGNGNWSWRPESNIGEGTHEYTATATDEAGNESVPSTGITITVDTLAP DTPTISAIGGAQNGGSTNETTPGITGAGTTGETVIIYNNGVEVARVDVVNGEWSYTLPTQ TDGPLNITVAAVDEAGNVSQVSPVFTVEVDTQAPTVPQIDAVSDSQLTNSVLYTRDGTPT LTGIGEPGSSVTVSVDGVASPVVVEVQPNGTWSWTANPALTEGPHTFSVTASDAAGNTSA SSGDLSVTVDTLPPATPTDIAIAAEGTPLTGTADDGTTVTVRDANGNVIGTGVATGGSFS IALSPAQLDPATLTLTATDAAGNASPSTTFVVPDSPLDLPAVPVITAINDDADPVTGDVK DKTTNDTTPTLTGTAEPGSVIAIYQDGVLVPLTNVVADVNGNWSYTPPLPLTEGPHTFAV TATDIDTGATSGQSPIATVTVDLTAPTAPAIGAVTDDVGPITGPIADGQSTNDNRPTLTG TGTAGDTITVYNNGAPLGTVVVGPTGTWSYTPPALDDGSHTLTVTATDPAGNESTPSTGI TIVVDTVSTTPVITSVTDNAGNAATPVPSGDPTNDTTPTLTGTAEPNSVVAIFDGATQIG TVAADGTGAWTFTPETALGEGTHDFTVRATDPQGNISQPSGVWSINIDLTAPQVPTIDTV SDNVPGGVTGPLTAGQVTNDTTPTLSGTGQAGTTIHVLNNGVEIGTTTVDGSGNWTFTPD PVLTDGTYNLRVNASDDVGNVSANSPVFAFTVDTTGPAAPVVTTVIDDVGPGTGTIASNG ATNDTRPTFNGTGEVGATVHVIVDDVEIGTAVVNAQGTWSFTPTTALSEGPHTITFNATD AAGNTGDTSPPFNLTVDTSVPVAPVFTPATDNVGTVLGPVASGQSTDDTTPTLNGTAAAN ATITIYENGQQVGTAVADANGVWSFTTGTLANGSHTWTATATDAAGNVSPASPGFTLVVD TTVPAAPVITQAIDDVGTLTGAIGSGQTTNDPLPRLVGTSEPLATVNIYEGTTLVGTGTA DANGNWTVDITVPLDTGSHTFTAEATDQAGNTGAPSTDFSLTIDTTPPALPVLTSITDDV GNAATPVANGGLTNDARPTLTGTAEAGATVTIFDNGVQIGTAVATGGAWSFTPSTPLADG PHNLTFSATDAVGNASAQTGGYTINVDATAPVAPAITSIVDDVGTVTGPVTGTNPTNDTR PTLNGTAEANATVRIYDGTTLVGTVTADANGNWTLPQTSTTLTEGAHNFTATATDAAGNT SAPSPIITINVDLTPPPAPTGLAVITNGTQVTGTAEAGSTVTITSSTGTVLGTAVADGSG NFSATLTPPQTGGESLIVFATDKAGNAGITTSVIAPITTIPNAPVITSIDDNVGTVTGNL TNGKTTDDTTPTLSGTAQPNATITLYNNGVSMGTVTANASGNWSFTTPVLSEGPHAFTAT ASNGSGTSPISTSTTVIVDLTAPTAPTGTFNADGSVLTGSAEAGSTVTIRLADNSTVTAT ADSNGSWSYTFLNKQTEGQTLQITATDAAGNVSLPGSALAPVVPLSASTNVEELALTTTA TVTNSQYSDYGFLLVGAVGNVLTLLGNDTAQVGFTVGSGGSADIAVNANATGAVLSLLNT LELVVQRFDAANNTWTTVVDTGQPQFADLLTLGATGVSLNLTGLADGQYRVLSYNTNLLA TGSYTSLDVAVKETSAGTVSGETNVVGNVITDVDPTAGSDNAPVGTTVTAVTNTQGTTTS VTADGTVIQGQYGTLTINLDGSYTYNLTNTSAAVIGRTESFTYTITHNGTSASANLVLSL GEGTSSSGIVAVDDTASLTFDTTVEAINNGTSSQGGFTLVGINLGNTLGLNLLDDLANPI IYSVEEGTTRTMTVQASVGGVALASVFDLYIYKFNNATQTFEQMRVEPGWLRAPLLGGTS SQLTLNLPAGEYLFLLNTAAGITALTAYTLNVLQDHVYSVASVSESTTGDVLADDIAPAG TVVSDVNGVAVNSSGLTEITGEYGTLRINAAGEYTYTLDSGVGADHISTPDTFVYTITAP DGSKDTASLNITPTARPMDAVNDVSTAMDVTSVHHTSTYTDTSVGTASWTTALLGSTQGS GSGTFVVDANTALHNASLHFNVASLLALGGLTVNWSITDGTNVIRSGSFSGGSLLGGSID VPLTGLDLNAGTYTLNFTGSVPGLSVGNITITPSVNGTTYSLSQFDATGTHTVDGNIFDG TGSAGAMDQLHSVDTRVSITGFDGVITTLDPYTGSTMSNITGHYGTLAIAADGSYTYTLN PGISLSTITSKEVFNYTLTDANGVKDTASLTIDMAPKFVSSEHNDVISGTAYGDTLIYQV LNNTAGNATAGNSTGDHWTNFSLTQGDKIDIGDLLVGWNGSASTLGNYVSVSQSGNNTVI SIDRDGTGAAYTKSTLVTLDNVQTTYDELVNQQHIIT >gi|333596725|gb|GL892087.1| GENE 1221 1360563 - 1361966 1748 467 aa, chain + ## HITS:1 COG:STM2690 KEGG:ns NR:ns ## COG: STM2690 COG1538 # Protein_GI_number: 16766004 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 21 467 22 469 469 589 72.0 1e-168 MGKKMPYWWLSCCLISVPAIAANPAAMINTGQLSETQELPSLNGRVAPVASKAAPGTLEL NEAVNRAVTWHPAISEAVGKLYQQSENVDVAKSKYYPQINAGMDNGYSHDGDDNGFTPSL VLSLSQMLYDFGKVASQVRAENAGVAQQQANVLVSIDTIAHDTAIAMVQVQTWQQMVETA KEQLDALTSIGTLTKQRNDEGATSLSDVVQTDARIEGARAQLMQYQASLDSSRATLMSLL GWDSLNAVSNDFPQSLARSCDIAEPDDRLVPSVLAAWAQANVAQANLDYANAQMTPTVSL EPEVRHYLNDRYSGNETRDRTQYSAWVKVQMPLYQGGGLTARRNAAGHAVESAQSTIQRT RLEVRQKLLEARSQVMSLMSTLQIQGRQEALSARTRELYQQQYLDLGSRPLLDVLNAEQE VYQARFTQQQTAGQLHQLQLNCLYNTGRLRHAFDLENRTIQTVEIQP >gi|333596725|gb|GL892087.1| GENE 1222 1361963 - 1364155 201 730 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 506 695 26 217 223 82 30 9e-14 MKQRDIPQGENMTDEALEQWAQAFGYVATRYRVACSPGSLVAGAPWLKGKPMVPALTQLA REAGLTFQLLTANQHSINSWRLPVVVELNDGKIGVIDNFDGEDTLEVSFFDDNTHTNRLS MSAMLPAIRHVIALRPLAALKDSRVDAYISKYRPDWLYRLVMRDLRPYSWVMLAALFINV LSLSGIVFSMQVYDRVIPAQSYPTLYVLTIGVLIATLFGFVLRVARGHIMDLLGKRSDLR VSDRVFGHALRLRHSAIPRSTGSFISQLRELEQIREMVTSSTISTIVDLPFFILFVIVLA IIAPQLAWIAPVAAVIMVLPGLLLQKKLAELAKQSAHESTLRNAVLVESVQGLEDIKLMQ AENRFLQQWNSYIQITAESGLRTRELTQNLISWGMTIQSLVYAGVIVVGAPMVIDGTLTT GSVVAASMLASRMIAPMATLCGVLARWQQVKAAKEGLDSIMQLPTENQREETPIRQDVLR GHYLFEQAQFRYHPEDPRMALRINRLEIKAGEKVAILGRNGAGKSTLLQAMAGGMDLAGG ELRLDNLSLPHLDVADVRRNVGFMTQNARLFYGTLRENITLGMPRATDEEIFEVLEMCGA ASFVQKLPKGLDYPIMENGVGLSGGQRQSILLARMLLRDPNIVLMDEPTASLDEHTEREF IQRLGAWLGNRTLVVATHRVPVLELVERVVVLKDGMLVMDAPKAQALNNSRMQQQQQATG REWKNENQSA >gi|333596725|gb|GL892087.1| GENE 1223 1364136 - 1365335 1254 399 aa, chain + ## HITS:1 COG:STM2692 KEGG:ns NR:ns ## COG: STM2692 COG0845 # Protein_GI_number: 16766006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 15 399 3 387 387 604 81.0 1e-173 MKISQRDVAAVEDLDNALDSESGYTGARRIVFFSLLMFVVLGVWAWFGVLDEVSTGTGKV IPSSREQVLQSLDGGILTELNVHEGDQVQAGQVLARLDPTRSESNVGESAARYRASLASS ARLYAEVNDLPLKFPPSLAKWTDLTAAETRLYNSRRAQLEDTQRELRAALDLANKELAIT QRLVKTGAASHVEVLRLQRQKSDLELKLTDVRSQYYVQAREALSKANAEVDMVSAILKGR QDSVTRLTVKSPVRGIVKNIKVTTIGGVIPPNGELMEIVPVDDHLLIETRLSPRDIAFIH PNQEALVKITAYDYAIYGGLHGVVETISPDTIQDEAKPEVFYYRVFIRTSQDYLVNKAGR HFSIVPGMIATVDIKTGEKTVLDYMIKPFNRAKEALRER >gi|333596725|gb|GL892087.1| GENE 1224 1365402 - 1366583 1552 393 aa, chain - ## HITS:1 COG:PAB2227 KEGG:ns NR:ns ## COG: PAB2227 COG1167 # Protein_GI_number: 14520410 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pyrococcus abyssi # 6 389 16 400 410 301 41.0 2e-81 MSANKLASSAQGLQSSAIRELLKHSKMAGVISLGGGIPNPDLFDHEGLKIAADAVLSQHF GEAFQYGLTEGVPGLREEIQRICEGRGIACKADDVVITSGSQQSLDVLARALINPGDTVV VERPTYLAALQVFGLAQANFESVGTDGDGMKVDELEALVATKTIKAVYIVPTFGNPGGVT LSEARRKQLVELSKRYDFVIIEDDPYSEINYTDEVFRPLIAHAKDIGNEDNVVYTSTFSK ILAPGTRVGWVLVPEWLKRAVVNLKQTTDLHTSTLSQLMTYEYLKTGRLANQIKMIREAY RQKYQTFATELEAELGDVMSFHKPKGGMFLWAKMNNGINTTKWLEKTLSNGVVFVPGEFF YCNEPDHTTLRMSFVTPTDEQLKEAVRRLKISL >gi|333596725|gb|GL892087.1| GENE 1225 1366604 - 1367491 889 295 aa, chain - ## HITS:1 COG:RSc3332 KEGG:ns NR:ns ## COG: RSc3332 COG0583 # Protein_GI_number: 17548049 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 289 1 289 298 407 70.0 1e-113 MDKLRGMETFIAVVESGSFTGAAARLEMSAVMVGKYIALLESQLGTRLLERNTRRQSLTD AGRVYFEEARRVLEQVSIAERAVERLRATPAGTLRVTAPTSFGGCVIAPLTATFLQRYPE VRIELDLTNRMVDLVEEGVDLAIRIGEIRHEDLVAKYLCPYNMVICAAPDYLARHGTPQT PADLVDHLCLSHTVWTARNEWRLPGVEGEVRWKRDAVLRCNDGYGLRMAARAGAGLLLQP EVLVAEELASGRLIRVLEPFTPAPRPVHLLWRQDLRPLPKLTEFIAHILLRLGTI >gi|333596725|gb|GL892087.1| GENE 1226 1367589 - 1368191 854 200 aa, chain + ## HITS:1 COG:RSc3331 KEGG:ns NR:ns ## COG: RSc3331 COG1028 # Protein_GI_number: 17548048 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 199 1 201 201 253 73.0 1e-67 MKIVIIGASGTVGRAVTEELSRRHEVIRVGRTQGDYQVDITSQASVQALFEKIGPVDAIV SASGGVHFGPLATMTDSEFNQGLQDKLLGQVRLALTGQRYLNEGGSITLISGIVAHEPIA QGVNATTVNAALEGFVRAAACELPRGIRINLISPTVLTESVDAYDGFFPGFESVPAATVA QAYRRSVEGVQSGRVYKVGY >gi|333596725|gb|GL892087.1| GENE 1227 1368303 - 1369682 1641 459 aa, chain - ## HITS:1 COG:ECs0373 KEGG:ns NR:ns ## COG: ECs0373 COG0402 # Protein_GI_number: 15829627 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 459 1 459 460 786 83.0 0 MSENKSRREFISQSGKMVTACALFGATGSVAYAADTAKATCETGKPMNITAKHYYLDNVL LEAGFNVDGSVATSTRTELKTLEIKDGKIVALRDNNSHADATLPHFDAGKKLMLPAMRDM HIHLDKTFYGGPWRSLNRPAGTTIQDMIRLEQKLLPELQPYTQERAEKLIDLIQSKGSTI ARSHCNIEPVSGLKNLENLQAVLARRKPGFDCEIVAFPQHGLLLSNAEKLMREAMQAGAH YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETSPAGVAAVNYMVETVEKTPAL KGKLTISHAFALATLNEQQVDEIATRMAAQQVTIASTVPIGTLHMPLKQLREKGVFVMTG TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQTLSRALGIATGDVLPLNDKGERVWPKA QDDASFVLVDASCSAEAVARISPRTATFHKGNLVWGTVG >gi|333596725|gb|GL892087.1| GENE 1228 1369684 - 1370640 1251 318 aa, chain - ## HITS:1 COG:ECs0372 KEGG:ns NR:ns ## COG: ECs0372 COG0549 # Protein_GI_number: 15829626 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli O157:H7 # 1 314 1 314 316 506 86.0 1e-143 MKELMVVAIGGNSIIKDNASQSVEHQAQAVKAVAESVLEMLASDYDIVLTHGNGPQVGLD LRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLAARGEQKAVTVVTQVEVDK NDPGFTHPTKPIGAFFSEAQRDELQLAHPDWHFVEDSGRGYRRVVASPQPRRIVEADAIK ALTQKGFVVIGAGGGGIPVVRSEQGDYQSVDAVIDKDLSTALLAREIGADVLVITTGVEK VCINFGKPNQQALDTVNVAQMTRYMDEGHFPAGSMLPKIVASLEFLHHGGKRVIITAPDC LPAALRGENGTHIVNEGR >gi|333596725|gb|GL892087.1| GENE 1229 1370761 - 1372305 2101 514 aa, chain - ## HITS:1 COG:slr0360 KEGG:ns NR:ns ## COG: slr0360 COG2252 # Protein_GI_number: 16331283 # Func_class: R General function prediction only # Function: Permeases # Organism: Synechocystis # 10 469 13 492 535 228 32.0 3e-59 MKNMKLEWKRGDWAAYFGLMTNNLTNLLTMMGLLIFVVGIPKEIVYGRIAPAFGLAVLVA SVCYAWFGLQMARATGRTDVTALPSGPSAPSIFTVTFLVLMPVYQQTGDADFAIQIGLVW CFVEAMILAGGSFLGETIRKMIPRTVLLSCLSGLGLLLLAMNPMLQAFEAPTVSFIVLLL IFINWFGKKPIFARIPTGLLLLIAGTLLAWISGLQSPEAIKASMSSFGFNPPEVHVDSFM QGLPHALPYLASAVPLGLANYIFDLENIESAHAAGDEYPTRKVMLANGLASMLGCLMGNP FPVTVYVGHPGWKAMGASIGYTLASGVTMFIVPLFGLGAFMLAIIPMTAIVPILVFIGVV TANQVVRETPKVEVPVIFICLFPWIANWALTMMNSVMSAAGTSAAKIGTDVLHSKGIYYE GLMHLGNGAPLASMLWGCIAIFAIINKPLRGAVAAAGGALLALFGVIHAPVVGFAEGSSL MFVTAYLMMGGMFVVKHFLDSREAASAAAPVSEA >gi|333596725|gb|GL892087.1| GENE 1230 1372317 - 1373732 2060 471 aa, chain - ## HITS:1 COG:no KEGG:ECL_04000 NR:ns ## KEGG: ECL_04000 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 471 1 471 471 930 97.0 0 MTTLFNQPLNVINVGIAMFSDDLKKQHVPVTQLDWTPPGQGNMQVVEALDQLAEKPLAEK IAAANQIALERIIQSHPVLVGYDQAINVVPGMTRTTILHAGPPVTWENMCGAMKGAVTGA LVFEGLATDLEDAARLAASGDITFSPCHEHDCVGSMAGVTSASMFMHIVENKTYGNRAFT NLSEQMAKILRMGANDQSVIDRLNWMRDVLGPMLRDAMNIIGEIDLRLMLAQALHMGDEC HNRNNAGTTLLIQALTPGLIQAGYPVAQQREVFEFVASSDYFSGPTWMAMCKAALDAAHD IEYSTVVTTMARNGYEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITE TYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLSFMGIPTAIDI TRVAGSGILPVINTAIAHKDAGIGMIGAGIVHPPFSCFEKALLTFRDRYFL >gi|333596725|gb|GL892087.1| GENE 1231 1373732 - 1375273 1849 513 aa, chain - ## HITS:1 COG:yahF KEGG:ns NR:ns ## COG: yahF COG0074 # Protein_GI_number: 16128305 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli K12 # 1 513 1 515 515 805 81.0 0 MPTKIVIKKNTYFDSVSLMSVSTKANKLPGVEQAFVAMATEMNKGVLKNLGLLTPELADA KNGDLMIVIKGDAANEETLAAIEALFTRKERAGSHEARYATLASAKAHRPDSNLAVISVN GTFAAREARQALENDLNVMLFSDNVSLDDELALKQLAHEKGLLMMGPDCGTAIINGAGLC FANAVRRGPIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIDM LEADDATQVIALISKPPAPAVAENVLARARACRKPVVVCFLGRNEPPADEDGLQFARGTK EAALKAVLLTGIKKESLDLHPLNWPLIEEVRARLTPQQKYIRGLFCGGTLCDEAMFAALE KFDDVYSNIQPDPARRLKDISVSQAHTFLDFGDDDFTNGKPHPMIDPTNRISRLLQEARD PQVGVIVMDFVLGFGAHDDPVGVMIEAIKEAQAIAKADNRPLEILGYVLGTDLDPQSLAQ QCQLLTDAGVIWASSSTNTGLLAREFVCKGERA >gi|333596725|gb|GL892087.1| GENE 1232 1375383 - 1375988 736 201 aa, chain - ## HITS:1 COG:yahD KEGG:ns NR:ns ## COG: yahD COG0666 # Protein_GI_number: 16128303 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 201 1 201 201 286 70.0 1e-77 MSATALVTEFLLAAEEGNIDALKACLEKGVDINATNRQKRTAIIIASLKKHYACVEFLIA AGADIDKQDQTCFNPFLISCLTNDLTLLRIVLPANPDLDRLTRFGGVGITPASEKGHVEI VRELLEKTDINVNHTNFVGWTPLLEAIVLNDGGATQQEIVKLLLDHGANPHMTDKYGKTP LELAREKGFNAIADLLLAAGA >gi|333596725|gb|GL892087.1| GENE 1233 1376309 - 1377238 981 309 aa, chain + ## HITS:1 COG:yahB KEGG:ns NR:ns ## COG: yahB COG0583 # Protein_GI_number: 16128301 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 308 1 308 310 569 88.0 1e-162 MNSIFTEENLLAFTTAARFGSFSKAAAELGVTTSAISYTIKRMETGLDVVLFVRNTRSIE LTESGFYFYRKATDLLNDFHAIKRGIDTISQGIETRVRICINQLLYTPRHTARLLQVLKK QFPTCQITVTTEVYNGVWDSIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWVFAIAPTH PLAFAPQPISESQLRLYPNIMVEDTAHTINKKVGWLLHGQEAILVPDFNTKCQCQILGEG IGFLPEYMTREAVEDGLLVTRRINNPRQDSRMLLATQHAATGQVTRWIKQQFGPEGVLTR IYSDLLWRT >gi|333596725|gb|GL892087.1| GENE 1234 1377235 - 1377393 112 52 aa, chain - ## HITS:1 COG:ECs3527 KEGG:ns NR:ns ## COG: ECs3527 COG0401 # Protein_GI_number: 15832781 # Func_class: S Function unknown # Function: Uncharacterized homolog of Blt101 # Organism: Escherichia coli O157:H7 # 1 51 1 51 52 69 84.0 1e-12 MDFWRVVFTIILPPLGVLLGKGLGWAFILNILLTILGYFPGLIHAFWVQTKS >gi|333596725|gb|GL892087.1| GENE 1235 1377572 - 1378090 498 172 aa, chain + ## HITS:1 COG:ygaP KEGG:ns NR:ns ## COG: ygaP COG0607 # Protein_GI_number: 16130582 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 171 1 173 174 214 67.0 5e-56 MSLPLISPQQADALIAEGAKLIDIRDPDEYAREHIPAAHSIPLDSLPGGLNAAPGETVIF HCQSGARTSNNDARLAQAASPAHAFVVEGGIQGWKQAGLLTLEDRSQPLPLMRQVQIAAG LLILCGVVLGYSVSSGFFLLSGFVGAGLVFAGVTGFCGMARLLKVMPWNRRT >gi|333596725|gb|GL892087.1| GENE 1236 1378173 - 1378352 208 59 aa, chain + ## HITS:1 COG:no KEGG:ECL_04006 NR:ns ## KEGG: ECL_04006 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 59 1 59 59 100 88.0 2e-20 MFSVGDYVQPRQGGPKLKVLEVNGENIVAVQASNEQGEKYHLKAADVVLYSEEGDFGVC >gi|333596725|gb|GL892087.1| GENE 1237 1378390 - 1378794 436 134 aa, chain - ## HITS:1 COG:STM2799 KEGG:ns NR:ns ## COG: STM2799 COG2916 # Protein_GI_number: 16766110 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Salmonella typhimurium LT2 # 1 134 1 133 133 152 70.0 1e-37 MALTLQNLNNIRTLRALARELSMDVLEEVLEKFRMVTEEKRSEQAELERQRAEQQDKINA LLELMKADGISPSDLLGSDLAQAGQPTKKRKARAAKYRFIDANGEEKTWTGQGRTPKPIA TALANGKSLDDFLI >gi|333596725|gb|GL892087.1| GENE 1238 1379291 - 1379740 486 149 aa, chain + ## HITS:1 COG:no KEGG:CKO_04017 NR:ns ## KEGG: CKO_04017 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 149 22 170 170 255 91.0 4e-67 MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNIMIAWPYG LYRDAVMRVARRISPAGWAKNLADVLAYVTFQSPVYVVILLTVGADWHQIAAAVSSNIVV SMLMGAVYGYFLDYCRRLFKVSPYAQAKA >gi|333596725|gb|GL892087.1| GENE 1239 1379773 - 1380117 311 114 aa, chain - ## HITS:1 COG:no KEGG:ECL_04011 NR:ns ## KEGG: ECL_04011 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 114 1 114 114 222 97.0 5e-57 MYLRPDEVARVLEKEGFTMDEVTSKAYGYRRGENYVYVNREARMGRTALIIHPTLKDRSL SFAEPASDIKTCDHYQQFPLYLGGETHEHYGIPHGFSSRMALERFLKGLFGDVQ >gi|333596725|gb|GL892087.1| GENE 1240 1380264 - 1380602 381 112 aa, chain + ## HITS:1 COG:STM2802 KEGG:ns NR:ns ## COG: STM2802 COG4575 # Protein_GI_number: 16766113 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 112 1 112 112 151 73.0 3e-37 MEDRMFNRPNRNDMNDDTQDIRNDVSQLADTLEAVLKSWGSDAKDEADAAKRKAQSLLRE TRARMNGRSRTTQAACDMASCATTFVREKPLCTLGTVAAVGIFVGALLSLRK >gi|333596725|gb|GL892087.1| GENE 1241 1380846 - 1381085 212 79 aa, chain + ## HITS:1 COG:STM2805 KEGG:ns NR:ns ## COG: STM2805 COG0695 # Protein_GI_number: 16766116 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 72 1 72 81 132 86.0 2e-31 MSIIIYTRNDCVQCHATKRAMESRGVAFEMVNIDHVPDAADLLRAQGFRQLPVVVAGETS WSGFRPDMINRLAAQGVSA >gi|333596725|gb|GL892087.1| GENE 1242 1381133 - 1381492 309 119 aa, chain + ## HITS:1 COG:ECs3537 KEGG:ns NR:ns ## COG: ECs3537 COG1780 # Protein_GI_number: 15832791 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Escherichia coli O157:H7 # 1 118 18 135 136 213 87.0 6e-56 MERLGLPAIRIPLNERERIQVDEPYILVVPSYGGGGTAGAVPRQVIRFLNDPHNRQLIRG VIAAGNRNFGEAFARAGDVISQKCGVPYLYRFELMGTQQDVENVRKGVNEFWQRQPQNV >gi|333596725|gb|GL892087.1| GENE 1243 1381528 - 1383609 2433 693 aa, chain + ## HITS:1 COG:ECs3538 KEGG:ns NR:ns ## COG: ECs3538 COG0209 # Protein_GI_number: 15832792 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 693 22 714 714 1281 89.0 0 MLNLYDREGRIQFDKDREAVDAFFAAHVRPNSVVFGSQQERLDWLVKEGYYEERVLTRYD RAFVVALFERAHVSGFRFQTFLGAWKYYTSYTLKTFDGKRYLESFEDRTVMVALTLAQGD EALAERLTEEILSGRFQPATPTFLNCGKAQRGELVSCFLLRIEDNMESIGRAVNSALQLS KRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFKLAKENAEMALFSPYDIERIYGKA FGDVAISELYDELVADDRIRKNTINARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGR INMSNLCSEILQVNSASSYDENLGYADVGNDISCNLGSLNIAHTMDSPDFGRTVETAIRG LTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEGLDFTNLYFYTI TWHALHTSMRLARERNQRFAGFEQSRYASGEYFSQYLEGDWQPKTEIVRALFARAGITLP TREMWLQLREDVMRYGLYNQNLQAVPPTGSISYINHATSSIHPIVSKIEIRKEGKTGRVY YPAPFMTNENLALYQDAYEIGPEKIIDTYAEATKHVDQGLSLTLFFPDTATTRDINKAQI YAWKKGIKTLYYIRLRQLALEGTEIEGCVSCAL >gi|333596725|gb|GL892087.1| GENE 1244 1383619 - 1384296 577 225 aa, chain + ## HITS:1 COG:STM2808 KEGG:ns NR:ns ## COG: STM2808 COG0208 # Protein_GI_number: 16766119 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 209 1 209 319 374 88.0 1e-103 MKLSRVSAVNWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSHAEQQLTIRVF TGLTLLDTIQNTVGAPALMSDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDA AYAWSEESTSLQRKADLVLEYYRADEPLKKKIASVFLESFLFYSGFWLPMYWSSRGKLTN TADLIRLIIRDEAVHGYYIGYKYQKGWRKSVRKNARNSKVLPSIY >gi|333596725|gb|GL892087.1| GENE 1245 1384296 - 1384577 438 93 aa, chain + ## HITS:1 COG:STM2808 KEGG:ns NR:ns ## COG: STM2808 COG0208 # Protein_GI_number: 16766119 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Salmonella typhimurium LT2 # 1 93 227 319 319 170 88.0 7e-43 MDLYDNELSYTEELYAGTGWEEDVKAFLCYNANKALMNLGYEALFPPEMAEVNPAILAAL SPNADENHDFFSGSGSSYVMGKAVETQDEDWDF >gi|333596725|gb|GL892087.1| GENE 1246 1384911 - 1386113 1256 400 aa, chain + ## HITS:1 COG:proV KEGG:ns NR:ns ## COG: proV COG4175 # Protein_GI_number: 16130591 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Escherichia coli K12 # 1 400 1 400 400 730 94.0 0 MAIKLEVKNLYKIFGEHPQRAFKYIEKGLTKEQILEKTGLSLGVKDASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIARISDAELREVRRKKIAMVFQSFALMPH MTVLDNTAFGMELAGTPAQERQEKALDALRQVGLENYAHAYPDELSGGMRQRVGLARALA INPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN GEVVQVGTPDEILNNPANDYVRTFFRGVDISHVFSAKDIARRTPNGIIRKTPGFGPRSAL KLLQDEDREYGYLVERGNKFVGVVSIDSLKTALSENQGIDAALIDAPLAVDAETPLSELL SHVGQAPCAVPVVGEEQQYVGIISKRMLLQALDREGTNNG >gi|333596725|gb|GL892087.1| GENE 1247 1386106 - 1387170 1418 354 aa, chain + ## HITS:1 COG:STM2810 KEGG:ns NR:ns ## COG: STM2810 COG4176 # Protein_GI_number: 16766121 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 354 1 354 354 559 90.0 1e-159 MADQSNPWGTTEAADSAAQSADAWGSTPAPADGGGAADWLNSAPAPAPEHFNIMDPFHKT LIPLDSWVTEGIDWVVTHFRPVFQGIRIPVDYILNGFQQLMLGMPAPVAIILFSLIAWQF GSAGMGVATLISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKII RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR LDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFTK >gi|333596725|gb|GL892087.1| GENE 1248 1387180 - 1388175 1414 331 aa, chain + ## HITS:1 COG:STM2811 KEGG:ns NR:ns ## COG: STM2811 COG2113 # Protein_GI_number: 16766122 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Salmonella typhimurium LT2 # 1 331 1 331 331 606 89.0 1e-173 MRHNVLFATAFATLVSTSAVAADLPGKGITVQPVQSTISEESFQTQIVSRALEKLGYTVN TASEVDYNVGYTSIASGDATFTAVNWQPLHDDMYAAAGGDKKFYREGTFVTGAAQGYLID KKTADKYHITNIEQLKDPKIAKLFDTNGDGKADMMGCSPGWGCEAVINHQNKAFDLAKTV DVSHGNYSAMMADTIARFKEGKPVIYYTWTPYWVSDVLKPGKDVVWLQVPFSSLPGEQKD IDTKLPNGMNYGFPVNTMHIVANKAWAEKNPAAAKLFSVMKLPLADINAQNAMMHAGKSS EADIKNHVDGWIKAHQQQFDGWVKEALAAQK >gi|333596725|gb|GL892087.1| GENE 1249 1388368 - 1389552 1334 394 aa, chain + ## HITS:1 COG:ECs3543 KEGG:ns NR:ns ## COG: ECs3543 COG0477 # Protein_GI_number: 15832797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 392 1 392 394 543 87.0 1e-154 MTKTTQGLSPALILLMSVATGLAVASNYYAQPLLDTIARAFDLSASSAGFIVTAAQLGYA AGLLFLVPLGDMFERRMLIVSMTLLAAGGMLITASSQSLTMMIIGTALTGLFSVVAQILV PLAATLASPEKRGKVVGTIMSGLLLGILLARTVAGLLASLGGWRTVYWVASVLMVIMALA LWRGLPKVKQENHLNYPQLLASVFSLFTRDKLLRTRAILGCLTFANFSILWTSMAFLLAA PPFNYSEGVIGLFGLAGAAGALGARPAGGLADKGKSHMTTSAGLVLLLLSWAAIWYGHVS VLALIVGILVLDLTVQGVHITNQTVIYRVKPEARNRLTAGYMTSYFIGGAAGSLISASAW QHAGWTGVCAIGAIVAAINLLVWWRGYHRQEAIH >gi|333596725|gb|GL892087.1| GENE 1250 1389867 - 1390397 639 176 aa, chain + ## HITS:1 COG:ECs3546 KEGG:ns NR:ns ## COG: ECs3546 COG1846 # Protein_GI_number: 15832800 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 175 1 175 176 299 94.0 2e-81 MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQGKLLENRNKMLKAQGINETLFMA LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK GHEFLREVLPPQHNCLHQLWSALSTAERDQLEHITRKLLTRLDQMDEDGVILEALR >gi|333596725|gb|GL892087.1| GENE 1251 1390527 - 1391699 1487 390 aa, chain + ## HITS:1 COG:STM2814 KEGG:ns NR:ns ## COG: STM2814 COG1566 # Protein_GI_number: 16766125 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 390 1 390 390 610 88.0 1e-174 MSANAENTPPQQPVNKKGKRKSALILLTLLFIIIAVAYGIYWFLVLRHVEETDDAYVAGN QVQIMAQVSGSVTKVWADNTDFVKKGDVLVTLDPTDAQQAFEKAQTALASSVRQTRQLMI NSKQLQANIDVQKTALAQAQSDLNRRVPLGTANLIGREELQHARDAVASAQAQLDVAIQQ YNANQAMVLGTSLENQPAVKQAATEVRNAWLALQRTKIVSPMTGYVSRRSVQPGAQISTT TPLMAVVPANNLWVDANFKETQLAHMRIGQTATVVSDIYGDDVKYTGKVVGLDMGTGSAF SLLPAQNATGNWIKVVQRLPVRIELDPQQLADHPLRIGLSTLVTVDTANRDGQILASQVR STPAYESNAREISLDPVNKLIDDIVKANAG >gi|333596725|gb|GL892087.1| GENE 1252 1391716 - 1393263 2029 515 aa, chain + ## HITS:1 COG:STM2815 KEGG:ns NR:ns ## COG: STM2815 COG0477 # Protein_GI_number: 16766126 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 505 1 502 512 874 90.0 0 MQQQKPQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITS FGVANAISIPITGWLAKRVGEVKLFLWSTILFVLASWACGMSSSLTMLIFFRVIQGIVAG PLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPI GALVVLMTLQSLRGRETRTEQRRIDGIGLALLVVGIGSLQIMLDRGKELDWFASTEIIVL TVVAVVAISFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQE VYGYTATWAGLASAPVGLIPVLLSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEP GMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPPERMAAASSLSNFTRTLAGSIGTSIT TTLWTNRESMHHAQLTEAVNPFNPNAQQMYSQLEGMGMTEQQASGWLAQQITNQGLIISA NEIFWISAGIFIVLLGLVWFAKPPFGAGSGGGGAH >gi|333596725|gb|GL892087.1| GENE 1253 1393462 - 1395117 1748 551 aa, chain + ## HITS:1 COG:PA3792 KEGG:ns NR:ns ## COG: PA3792 COG0119 # Protein_GI_number: 15598987 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Pseudomonas aeruginosa # 1 551 39 583 592 634 56.0 0 MLNTPADKYQPYPTLSLPDRRWPEQTITRAPRWLSTDLRDGNQALAEPMDSARKLQFWDL LLNCGFKEIEVAFPSASQTDFNFVRQLIEENRIPDDVTIQVLTQARDDLIHRTFDSLRGA KQATVHLYNATAPLFRRLVFGMEKAQIVELATRATRLIRQLCEENPETRWQYEYSPETFC FTEPEFALEICEAVAEIWQPCAARPMIINLPATVEVSTPNVYADQIEYFCRHFSRRSDVC ISVHPHNDRGTGVASAELAVMAGADRVEGCLFGNGERTGNVCLVTLAMNLYSQGISPNLD FSDMNRVVETVETCNQLPVHPRHPWAGRLAYTAFSGSHQDAIKKGFDARKPDERWEMPYL PVDPQDIGCTYEAVIRVNSQSGKSGSAWLIEQNHGLKLPRALQQDFSQHVQQETDSHGKE MTQNALWQLFRTRYGLVTAPQFALQSYRSDSQQDGQLRLTASVATQGGTRQLEGQGNGLL SAAAHGLSRWVNAPFVIKDYHEHTLGERSDSRSVAYIRCLFQDGTSRWGVGIDSDVARAS IQALFNAVSRS >gi|333596725|gb|GL892087.1| GENE 1254 1395104 - 1395868 434 254 aa, chain - ## HITS:1 COG:PA1235 KEGG:ns NR:ns ## COG: PA1235 COG2207 # Protein_GI_number: 15596432 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 12 251 9 248 260 258 55.0 9e-69 MTTTTTFSFTHRPLVPFSHDYVHGDSEPWHQHDCAQLLHSLTGVVRVDTASGCWVVPPGR GVWLPAGTQHALRITGNVAARTLFIDPLARADLPATCQIVQISPLLRELILTSLTLPESY APGSRDERVYELILDEIRLMPVLPFHLPEPESEALRRLCQQIREVPGDSWSSTQAAGIVG MSERTLNRHFQQQTGVSYGEWVRRARLLEALVRLAQGQPVLRVALDLGYGSHSAFTAMFR RVMGLSPSDYFRND >gi|333596725|gb|GL892087.1| GENE 1255 1395919 - 1396434 647 171 aa, chain - ## HITS:1 COG:STM2817 KEGG:ns NR:ns ## COG: STM2817 COG1854 # Protein_GI_number: 16766128 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 330 91.0 5e-91 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDTITVFDLRFCVPNKEVMPEKGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGQPEEKRVADAWKAAMEDVLKVKEQNQI PELNVYQCGTYQMHSLEEAQEIARHIIERDVRVNSNDELALPKEKLQELHI >gi|333596725|gb|GL892087.1| GENE 1256 1396588 - 1398132 1732 514 aa, chain - ## HITS:1 COG:STM2818 KEGG:ns NR:ns ## COG: STM2818 COG2918 # Protein_GI_number: 16766129 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Salmonella typhimurium LT2 # 1 514 1 518 518 967 88.0 0 MIPDVSQALAWLENHPQALKGIQRGLERETLRVNADGSLATTGHPKALGSALTHKWITTD FAEALLEFITPVDGDIDHMLTIMRDVHRFTARNLGDERMWPLSMPCYIEQGQDIELAQYG TSNIGRLKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGETDKEAISAGYFRLI RNYYRFGWVIPYLFGASPAICSSFLQGKPTALPFEKTECGMYYLPYATSLRLSDLGYTNK SQSNLGITFNDLHDYVAGLKRAIKTPSEEYEKIGLEKYGKRLQINSNVLQIENELYAPIR PKRVTRSGETPSDALQRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCVLADAPE MSSDELLCTRTNWNRVILEGRKPGLTLGIGCETAQFPLAKVGKDLFHDLKRVAQTLDSVY GGEAYQKVCDELVESFNNPELTFSARILRSMIEQGIGGTGRSLAAEYREMLMQEPLEILS EADFVAERDASVVRQKEVEAADTESFEAFLAKQA >gi|333596725|gb|GL892087.1| GENE 1257 1398216 - 1398500 296 94 aa, chain - ## HITS:1 COG:yqaA KEGG:ns NR:ns ## COG: yqaA COG1238 # Protein_GI_number: 16130601 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 94 49 142 142 145 87.0 2e-35 MGNSLGGLTNVILGRFFPLREKSRWQEKAVGWLKRYGAATLLLSWMPVIGDLLCLLAGWM RISWGPVLFFLCLGKALRYVLLAWVTLQGMTWWH >gi|333596725|gb|GL892087.1| GENE 1258 1398641 - 1399207 438 188 aa, chain - ## HITS:1 COG:yqaB KEGG:ns NR:ns ## COG: yqaB COG0637 # Protein_GI_number: 16130602 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 188 1 188 188 320 82.0 8e-88 MYAQYDGLIFDMDGTLLDTEPTHRLAWTDVLARYGMRFDLQAMIALNGSPTWRIAQAVIE LNQADLDPHQLAREKTDAVKAILLDTVQPLPLIDVVKEWHGRRPMSVGTGSESAIAEALL NHLGLRHYFSAVVAADHVKHHKPAPDTFLLCAELMGVQPAKCVVFEDADFGIQAARDAGM AAVDVRLL >gi|333596725|gb|GL892087.1| GENE 1259 1400353 - 1400538 204 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 60 1 60 61 83 61 4e-14 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS Y >gi|333596725|gb|GL892087.1| GENE 1260 1400780 - 1403407 3173 875 aa, chain - ## HITS:1 COG:STM2827 KEGG:ns NR:ns ## COG: STM2827 COG0013 # Protein_GI_number: 16766133 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 875 1 875 876 1595 91.0 0 MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYS RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENW FNLPKERLWVTVYETDDEAFDIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCG PCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG LERIAAVLQHVNSNYEIDLFSTLIKAVADVTGATDLNNKSLRVIADHIRSCAFLIADGVI PSNENRGYVLRRIIRRAIRHGNMLGAKDTFFYKLVGPLIGVMGSAGDELKRQQAQVEQVL KTEEEQFARTLERGLALLDDELAKLKGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV DEAGFEAAMEEQRRRARESSGFGADYNAMIRVDSASEFKGYEELALTSNVTALFVDGKAV DSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNGFSFTVSDTQKYGQAIGHQGKLVSG SLKVGEGVQANVDEARRARIRLNHSATHLMHAALRDVLGTHVAQKGSLVNDKVLRFDFSH FEAMKPSEIRAVEDLVNAQIRRNLPIETHVMDLEDAKKKGAMALFGEKYDDRVRVLSMGD FSTELCGGTHASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIASLHAQSDQLHEIAQL LKGDSQNLGEKVRVALDRTRQLEKELQQLKEQAAAQESANLSSKAVDIKGVKLLVSDLAG VEPKMLRTMVDDLKNQLGSTVIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVG GKGGGRPDMAQAGGTDAAALPAALASVESWVSAKL >gi|333596725|gb|GL892087.1| GENE 1261 1403539 - 1404039 407 166 aa, chain - ## HITS:1 COG:ECs3555 KEGG:ns NR:ns ## COG: ECs3555 COG2137 # Protein_GI_number: 15832809 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 266 82.0 1e-71 MSEPTSRRPAYSRLLDRAVRILAVRDHSEQELRRKLSAPVISKNGPEDIDATAEDYDRVV AWCYEHHYLDDGRFAARFLASRGRKGYGPARIRQELNQKGVARESIEKAMRESEIDWCEL AREQAVRKYGEPLPREFSEKVKIQRFLLYRGFLMEDIQDIWRNFTD >gi|333596725|gb|GL892087.1| GENE 1262 1404109 - 1405167 1569 352 aa, chain - ## HITS:1 COG:STM2829 KEGG:ns NR:ns ## COG: STM2829 COG0468 # Protein_GI_number: 16766135 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Salmonella typhimurium LT2 # 1 352 1 353 353 629 94.0 1e-180 MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG RIVEIYGPESSGKTTLTLQVVAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQP DTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIG QGKANAISWLKENPAAAKEIEKKVRELLLNNQDSKPDFVVDGADAEETNEDF >gi|333596725|gb|GL892087.1| GENE 1263 1405257 - 1405754 295 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 24 157 766 898 904 118 48 1e-24 MTDHELMQLSEVVGLALKQRGATITTAESCTGGWVAKAITDIAGSSAWFERGFVTYSNEA KAQMIGVREATLEQHGAVSEPVVIEMAIGALKEARADYAISISGIAGPDGGSDVKPVGTV WFGFATSKGEGITRRECFSGDRESVRRQATEYALKTLWQQFLQNT >gi|333596725|gb|GL892087.1| GENE 1264 1405885 - 1406763 1003 292 aa, chain - ## HITS:1 COG:mll8313 KEGG:ns NR:ns ## COG: mll8313 COG0803 # Protein_GI_number: 13476864 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mesorhizobium loti # 24 291 29 310 313 239 44.0 4e-63 MKRTGLAVALALGMMTHGVIAKTLNVVTSFSILGDITQQVGGDRVKVTTLVGPDGDPHTF EPSPKDSAALSKADVVVVNGLGLEGWLDRLVKASGFKGQLVVASDGVKTHTLEEDGKTVT DPHAWNSAANGALYAQNILSGLVKADPEDKAALEASGKPYIAQLSQLDGWAKKRFSDIPQ AKRKVLTSHDAFGYFSRAYGVTFMAPQGLSSESEASAAQVAEIINQIKADGVHTWFMENQ LDPRLVKQIATATGAQPGGELYPEALSAKGGVADTYVKAFRHNVKTLANSMK >gi|333596725|gb|GL892087.1| GENE 1265 1406778 - 1407638 713 286 aa, chain - ## HITS:1 COG:NMA0790 KEGG:ns NR:ns ## COG: NMA0790 COG1108 # Protein_GI_number: 15793764 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Neisseria meningitidis Z2491 # 3 273 4 273 291 224 53.0 2e-58 MIWHLFFQPFIEYGFMRRALVVCLALSVSTTALGVFLQLRRMSLMGDALSHAILPGVAVG YLLSGMSLLAMTVGGFIAGIAVALVAGLVSRRTPLKEDASFAGFYLGSLALGVTLVSLRG SNVDLLHLLFGSILAVDSASALFVTGVCMFTLLTLAIFYRGLVSEAFDTAWLQVNARWLP GMLHGLFLALLVLNLVAGFQVLGTLMAVGLMMLPAVAARCWVRTLPGLLLMAGISGIFCA WLGLSLSWAVSLPAGPSIVLTASALFFISVLFGTRSRLADSLRTLF >gi|333596725|gb|GL892087.1| GENE 1266 1407635 - 1408288 597 217 aa, chain - ## HITS:1 COG:NMB0588 KEGG:ns NR:ns ## COG: NMB0588 COG1121 # Protein_GI_number: 15676493 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Neisseria meningitidis MC58 # 2 202 13 214 251 159 41.0 3e-39 MIVMNDLVAGYDRQPVTRALSGVIERGSMTAIVGANGCGKSTLLKTLAGFIPPVSGTFRW QGRRPVVGWLAQRHALEAQFPLTVQDVVSMGCWPEISLFAGFRRDTRMRIADALERVGLA SMAFSTIDELSGGQFQRMLFARVFVQQAPLIMLDEPFTGVDEATCNVLMDLMMEMYMQGQ TLLAVLHDSERVARHFPHTLRLDADIPQWKTGRVRVA >gi|333596725|gb|GL892087.1| GENE 1267 1408285 - 1408386 73 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLFSLSSPVRLLLALVLILFLGLAVRWAVALP >gi|333596725|gb|GL892087.1| GENE 1268 1408599 - 1409699 1307 366 aa, chain - ## HITS:1 COG:STM2831 KEGG:ns NR:ns ## COG: STM2831 COG2951 # Protein_GI_number: 16766137 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Salmonella typhimurium LT2 # 1 358 1 358 359 637 86.0 0 MFKRRYAALLPALILLSACSSKPKTEAVQQTAGAPSGGFLLEPQHNMMQMGGDFANNPAA EQFIDKMVSKHGFDRQQLHAILSQAKRLDYVLRLMDRQAPTAQVPTGPNGAWLRYRKQFI TPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRIMGKTRILDALATLS FNYPRRAEYFSSELETFLLMARDEQDDPLDLKGSFAGAMGYGQFMPSSYKQYAVDFNGDG HINLWDPEDAIGSVANYFKAHGWTPGGQVAVQANGEAFGLENGFKTKYSVAQLAAAGLTP SQPLGNVDQVSLLRLDVGTGYQYWFGLPNFYTITRYNHSTHYAMAVWQLGLAVSQARVPA ASPFSQ >gi|333596725|gb|GL892087.1| GENE 1269 1409889 - 1410854 1246 321 aa, chain + ## HITS:1 COG:gutQ_1 KEGG:ns NR:ns ## COG: gutQ_1 COG0794 # Protein_GI_number: 16130615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 14 204 1 191 192 342 92.0 6e-94 MSDFLLNAGRQTLLLELQEASRLPERLGEDFVRAANTIIHCEGKVIVAGIGKSGHIGKKI AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKSVALL AMTGKSRSPLALAAKATLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE DFARSHPAGALGARLLNKVHHLMRTDDAIPQVKLDTSVMDAMLELSRTGLGLVAVCDDGG NVKGVFTDGDLRRWLVGGGRLETQVSDAMTKGGLTLNADSRAIEAKEVLMKRKITAAPVV DEHGRLCGAINLQDFYQAGII >gi|333596725|gb|GL892087.1| GENE 1270 1410851 - 1412365 1646 504 aa, chain - ## HITS:1 COG:ygaA KEGG:ns NR:ns ## COG: ygaA COG3604 # Protein_GI_number: 16130616 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli K12 # 1 503 26 528 529 814 85.0 0 MSFSVDVLAKIAIELQTGIGHQDRFQRLISTLRHVLGCDASALLRYEGRQFIPLAIDGLA KDVLGRRFTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACIGLPLFA GQNLIGALTLDGMSPDQFDTFSDEALRLIAALAAGALNNALLIEQLESQNILPGSPTVFE QVAHTEMIGLSPGMEQLKKEIEIVAASDLNVLIFGETGTGKELVAKAIHEASPRAVNPLV YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKLL RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGNFRADLFHRLSVFPLTVPPLRE RGDDVVLLAGFFCEQCRLKMGLSRVVLSPGARTHLLSYGWPGNVRELEHAIHRAVVLARA TRSGDEVVIHAHHFALHEETMSSVKPVMPESVNENLREATDAFQRQMITRALEQNNRSWA ACARTLEMDVANLHRLAKRLGLKG >gi|333596725|gb|GL892087.1| GENE 1271 1412553 - 1414001 1862 482 aa, chain + ## HITS:1 COG:STM2840_1 KEGG:ns NR:ns ## COG: STM2840_1 COG0426 # Protein_GI_number: 16766146 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Salmonella typhimurium LT2 # 1 394 1 394 394 813 96.0 0 MSILVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREGKNVLIDTVDHKFSREFV QNLRSEIDLNDIDYIIINHAEEDHAGALTELMSYIPDTPIYCTTNAIDSINGHHHHPEWN FHTVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYMTGDAVLFSNDAFGQHYCDERLFND EVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRENPTQIVE LYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGINEVDPNVAVKIFNVARSDKNEVLT NVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSSRL QDAGFEMSLSLKAKWRPDLDALEICRQHGRDIARQWALAPLPENAPAPAVAPGSVAEAAP ATADLGPCMQCSVCQWIYDPELGEPLQDVAPGTPWSEVPDNFLCPECSLGKDVFDELATE AK >gi|333596725|gb|GL892087.1| GENE 1272 1413998 - 1415131 1286 377 aa, chain + ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 376 1 376 377 614 83.0 1e-176 MSHGIVIIGSGFAARQLVKNIRKQDANVPLTVIAADSMDEYNKPDLSHVISQNQRADDLT RQTAGEFAEQFNLRLFPYTWITDIDADAHVVKAKDKTWQYDKLVLATGASAFVPPVEGRE LMVTLNSQQEYQASETLLRDAQRVMIVGGGLIGTELAMDFCRAGKSVTLVDHAASILSAL MPAEVSSRLQHRLTDMGVHLLLKSQLQSLSKTDTGIRATLDRNRSVEVDAVIAATGLRPE TALAHRAGAEINRGVKVDSYLQTTQPDIYALGDCAEINGQVLPFLQPIQLSAMFLAKNLL GGNAPVKLPAMLVKVKTPELPLHLAGETQRQDLDWEIVLSPQGMVARGTDTDGQMRAFVV SEDRMKEAFTLLKSLPA >gi|333596725|gb|GL892087.1| GENE 1273 1415245 - 1416267 1319 340 aa, chain - ## HITS:1 COG:YPO2673 KEGG:ns NR:ns ## COG: YPO2673 COG3376 # Protein_GI_number: 16122878 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity nickel permease # Organism: Yersinia pestis # 10 336 19 348 352 369 60.0 1e-102 MLRLLRNEPRAACLLLALVMANLLAWGLAWQTFSGSTALMAASLLAWCYGLRHAVDADHI AAIDTVTRKMMQQGKRPSGVGAWFSLGHSTIVVLASIAIAATATAFQKNMAWFHETGSLI GTAVSATFLLAMALVNMVILRGVWRSFQALKHGRPVQGDITLPAQGGVMHWLFGKTFRLV NKSWQMYLVGFLFGLGFDTATEIGVLGISAASASSGMSVWSIMIFPALFASGMALVDTLD NLLMVGAYGWAFNKPQRKLYYNMTITGTSVVVALFIGGLEALGLLMDKFSLSGGVWDLIG AVNDNLGDAGFVVVGLFVACWLISMANYRWRGYDALVVRS >gi|333596725|gb|GL892087.1| GENE 1274 1416269 - 1418485 1412 738 aa, chain - ## HITS:1 COG:STM2842 KEGG:ns NR:ns ## COG: STM2842 COG0068 # Protein_GI_number: 16766148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 4 736 7 745 746 994 69.0 0 MRVNGVQLRVRGKVQGVGFRPFVWQLAHQLGLAGDVCNDGEGVLVHLAGSGGDFTARLRQ DCPPLARIDHIETQPFSWTTLPDAFAIRHSESGAMDTQIVPDAATCPACLAEMRDPRERR YRYPFINCTHCGPRFTIIRAMPYDRPATSMASFPLCMPCETEYRNPADRRFHAQPVACPD CGPQLEWRAGEAAATRESALSAAVERLKNGGIVAVKGLGGFHLVCDALNPQAILTLRTRK QRPTKPLAVMIPDADELPETIQTRLRSSAAPIVLTPKACLPAFPEEIAPGLNTVGVMLPA NPLQHLLMMACQRPLVMTSGNLSGRPPAITNPQAMEELGDIADGFLLHNRDILQRMDDSV MDRDGAILRRARGFVPDAIILPAGFRDIPPMLCTGAEMKNTFCLVRGNQAVLSQHFGDLS DEGVEAQWRSALTTMQDIYAFQPERVVCDAHPGYRARQWALEQTLPVETVLHHHAHAAAC LAENGWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYLDCERLGGLPAVALPGGDLAA KQPWRNLLAHCLAFVPDWQQYPETEAVQRQNWPLLATAVSRGINAPRASSCGRLFDAVAC ALGIETQRYEGEAACRLEALAERGAGGDHPVTLQADNLALFWQQWLTWRAEPGERAWAFH DALAKGLSELAASHARRLSLTTVCFSGGVLHNRLLRARLRHYLSDFTLLFPSRLPAGDGA ISFGQAVVAAARSCSQRI >gi|333596725|gb|GL892087.1| GENE 1275 1418492 - 1419052 602 186 aa, chain - ## HITS:1 COG:STM2843 KEGG:ns NR:ns ## COG: STM2843 COG1142 # Protein_GI_number: 16766149 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Salmonella typhimurium LT2 # 6 186 1 181 181 288 88.0 3e-78 MPEKQMNRFIMADASKCIGCRTCEVACVVSHQAEQDCASLTPDTFLPRIHVIKGVNISTA AICRQCEDAPCANVCPNGAIKREKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVVRNS GIGLSVRAEKAEANKCDLCYHRDAGPACMEACPTHALVCVDRDKLEQMSAEKRRRAAFDT SSSLLF >gi|333596725|gb|GL892087.1| GENE 1276 1419171 - 1420184 1229 337 aa, chain - ## HITS:1 COG:ECs3570 KEGG:ns NR:ns ## COG: ECs3570 COG1609 # Protein_GI_number: 15832824 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 332 2 333 337 521 77.0 1e-148 MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAIEESGYRPNLLARNLATKRTQ TLGLVVTNTLYHGVYFSELLFNAARMTEEKGRQLILADGKHSAEEEREAIQYLLDMRCDA VIIYPRFLNVEELDALVEKCEQPIMVLNRRLRKNSSHSVWSDHKASCQEAVSQLIAKGHR EIAFITGSLDSPTGVERLSGYRDALAQHGIAVRDALIVEGKWNPASGAAAVTQLLARGEP FTALVASNDDMAIGAIKQLHESGVATPGAVSVIGFDDVAIAPYIVPSLSSVRIPVTAMIQ ETISRLIFMLDGGEFKYQQTFSGELILRDSVIDGPHR >gi|333596725|gb|GL892087.1| GENE 1277 1420398 - 1421849 2148 483 aa, chain + ## HITS:1 COG:ECs3571_2 KEGG:ns NR:ns ## COG: ECs3571_2 COG1263 # Protein_GI_number: 15832825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 90 474 1 385 396 606 93.0 1e-173 MAKNYAALATDVVSALGGKENIVAVTHCMTRLRFVLKDESLTDAARLKSISGVLGVVRND NQCQVIIGNTVSQAYREVVSLLPANLQPAVPEGPQKITLRRIGAGILDALIGTMSPLIPA IIGGSMVKLLAMILEMTGVLGKGDPTLTILTVIGDGAFFFLPLMVAASAAVKFKTNMSLA IAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDR ITPAVTKNFLKPMLIVLIAAPLAIVLIGPLGIWIGSAISALVYTIHGYLGWLSVAIMGAL WPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQT ALAAAASAIMAGISEPALYGVAVRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFT SVQFFDPANPMTIVWVFGVMGLAVVLSFVLTLLLGFEDIPVEDEAEKARALQTAPVQNKA AEA >gi|333596725|gb|GL892087.1| GENE 1278 1421868 - 1423292 1991 474 aa, chain + ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 474 1 474 474 910 89.0 0 MSVFPQGFLWGGALAANQSEGAYREGGKGLTTVDMIPHGANRLAVKVGKEKRFSLRDDEF YPSHEAIDFYHRYKEDIALMAEMGFTVFRTSIAWSRLYPNGDEPLPNQEGIAFYRAVFEE CKKYNIEPLVTLCHFDVPMHLVTEYGSWRNRKMVDFFARYARTCFEEFNGLVKYWLTFNE INIMLHSPFSGAGLVFEEGENEDQVKYQAAHHELVASALATKIAHEVNPENQVGCMLAGG NFYPYSCKPEDVWMALEKDRENLFFIDVQARGSYPAYSARVFREKGVVIVKDPGDDELLK NTVDFVSFSYYASRCASADMNAGNTSAANIVKSLRNPHIQVSEWGWGIDPLGLRITMNMM YDRYQKPLFLVENGLGAKDVIDENGEINDDYRISYLREHIRAMGDAIEDGVPLLGYTTWG CIDLVSASTGEMSKRYGFVYVDRDNAGNGTLDRKRKKSFWWYKKVIASNGEDLE >gi|333596725|gb|GL892087.1| GENE 1279 1423364 - 1423804 565 146 aa, chain - ## HITS:1 COG:ECs3573 KEGG:ns NR:ns ## COG: ECs3573 COG0680 # Protein_GI_number: 15832827 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 140 12 151 156 235 84.0 2e-62 MMGDDGAGPLLAEMCDANPPGNWVVIDGGSAPENDVVAIRELHPDRLLIVDATDMGLNPG EIRLIDPDDIAEMFMMTTHNMPLNYLVDQIKDDVGEVLFLGIQPDIVGFYYPMTPPVKAA VEVVYSRLDGWIGNGGFEPLTPALSP >gi|333596725|gb|GL892087.1| GENE 1280 1423830 - 1424240 539 136 aa, chain - ## HITS:1 COG:no KEGG:ECL_04057 NR:ns ## KEGG: ECL_04057 # Name: not_defined # Def: hydrogenase 3 large subunit processing protein # Organism: E.cloacae # Pathway: not_defined # 1 136 1 136 136 258 94.0 4e-68 MSETVVFSQLSRKFIDENDATPDAAQQVVYYSLAIGHHLGVIDCLETALSCPWPEYLAWI ATLEEGSTARRKMEGVPKYGEIVIDANHITMLANAFDAALSRQTPAQQAWSKTLLGMLHD IHQESAIYLMVRRLRD >gi|333596725|gb|GL892087.1| GENE 1281 1424237 - 1425004 945 255 aa, chain - ## HITS:1 COG:hycG KEGG:ns NR:ns ## COG: hycG COG3260 # Protein_GI_number: 16130626 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli K12 # 1 255 1 255 255 491 92.0 1e-139 MENLLGPRDANGIPVPLTVEESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHAREPGEIDNQPA AILHPDMVQPLRVKVDRTARKLAGYRYGRQIADDYLRLLSQGDHQVARWLEAENDPRLNE IVANLNSIVDEARIR >gi|333596725|gb|GL892087.1| GENE 1282 1425004 - 1425546 587 180 aa, chain - ## HITS:1 COG:ECs3576 KEGG:ns NR:ns ## COG: ECs3576 COG1143 # Protein_GI_number: 15832830 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 179 1 179 180 324 91.0 6e-89 MFTFIKKVIKTGAQTSSYPLEPIPVDKNFRGKPEHNPQQCIGCAACVNACPSNALTVETD LKTGELAWQFNLGRCIFCGRCEEVCPTVAIRLSPEYELAVWKKEDFLQQSRFALCNCRVC KRPFAVQKEIDYAIALLKHNGDVRAEHHRESFETCPECKRQKCLLPSDRIDLTRHMREAS >gi|333596725|gb|GL892087.1| GENE 1283 1425556 - 1427265 2291 569 aa, chain - ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 412 412 847 96.0 0 MSEEKKGQQYLAALHQAFPGVVLEESWQTKDQVTVTIKVNYLPEVVEFLYYQQGGWLSVL FGNDERQLCGNYAVYYVMSMEQGEKCWITVRVEVDPNKPEYPSVTPRVPAAVWGEREVRD MYGLVPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDSETYEFINELGSKKNN VVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV CGICGFAHSTAYTTSVENGMGIVVPERAQMIRAILLEVERLHSHLLNLGLACHFVGFDSG FMQFFRVREASMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRRDVQELV DMLLSTPNIEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMTVH SEQGCDVISRLKVRINEVFTALNMIDFGLDNLPGGPLMVEGFTYIPNRFALGFAEAPRGD DIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTV VDVRKKKSQVVPYKELERYSIERKNSPLK >gi|333596725|gb|GL892087.1| GENE 1284 1427281 - 1428204 1278 307 aa, chain - ## HITS:1 COG:STM2850 KEGG:ns NR:ns ## COG: STM2850 COG0650 # Protein_GI_number: 16766156 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Salmonella typhimurium LT2 # 1 307 1 307 307 470 87.0 1e-132 MSLLLAILQALVLFAAAPLLSGITRVARARLHNRRGPGVLQEYRDLFKLLSRQSVAPDAA GWVFRLTPFVMVGVMLTIATALPVVTVGSPLPVLGDLITLIYLFAIARFFFAIAGLDTGS PFTGIGASREAMLGVLVEPILLLGLWVAAQVAGSTHISFITDTVYHWPVSRSLPLFLALC ACAFATFIEMGKLPFDLAEAEQELQEGPLTEYSGYGFAVLKWGISLKQLVVLQMFVGVFF PWGQMSHFSAGGLLLAVVVAALKLLIGVLVIALFENSMARLRFVETSRITWAGFGFAFLA FVSLLVA >gi|333596725|gb|GL892087.1| GENE 1285 1428206 - 1430020 2331 604 aa, chain - ## HITS:1 COG:ECs3579 KEGG:ns NR:ns ## COG: ECs3579 COG0651 # Protein_GI_number: 15832833 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 604 1 608 608 781 76.0 0 MNAIVMMTSGVAWFAAAAVLAPMVSFNKTLSGWIAGIGGAVGSLMTLAAGGVVLIDGQSV DTIIPLIHHAVELTPLNAIWLVTFGLCGLFISLFNIDWHRHPHTKVNGLLVNLLMAAAVC TVIASNLGALVVMAEIMALCGVFLTGCSASGKLWFALGRLGTLLLALACWLVWQRFGTLD FAALNGQMLGNDVWLLGVVGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKVGLFG ILTITLTGGQPPLWWGVALLIAGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGMG AGVTGLALNQPALIAAGFIGGLYHLVNHSLFKSTLFLGAGSVWFRTGHRDIEKLGGIGKK MPVISLAMLVGLMAMAALPPLNGFAGEWVIYQSFFALGQSEAFIGRLLGPLLAVGLAITG ALAVMCMAKVYGVTFLGAPRTREAENACCAPVLMCASVVALALCCIAGGVAAPWLLPLLG HAIPLPLATAHTVVSQPMMALLLIAAPLLPFVLMLFFRRDRLASRSRGAAWACGYEHEQS MVITAHGFAMPVKENFAAVLKLRHWLNPVGWVPGWQGAAVPVLFRRLALIELAVLVVIVI SRGA >gi|333596725|gb|GL892087.1| GENE 1286 1430017 - 1430526 490 169 aa, chain - ## HITS:1 COG:hycB KEGG:ns NR:ns ## COG: hycB COG1142 # Protein_GI_number: 16130631 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 167 34 200 203 256 89.0 1e-68 MPRLRVMRNEKESAPQLCHHCEDAPCAGVCPVNAITRVDGAVQLNESLCVSCKLCGIACP FGAIEFSGSRPLHIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGP ACVRTCPTRALVLVNIRDIARTSKRKRELTINTDVGDLSLLQALNEGAK >gi|333596725|gb|GL892087.1| GENE 1287 1430698 - 1431162 553 154 aa, chain - ## HITS:1 COG:no KEGG:ECL_04064 NR:ns ## KEGG: ECL_04064 # Name: not_defined # Def: formate hydrogenlyase regulatory protein HycA # Organism: E.cloacae # Pathway: not_defined # 1 154 1 154 154 271 89.0 9e-72 MTIWEISEKADYIAQRHQQLQEQWHLYCNSLIQGITLSKAHLHHAMSCAAQGDMRFVLFG HFTIYVTLAETFNSHTIEYYVETKEGDRYCIARAQLMADGMVDGHVSNRDRQQVLEHYLE KIAPVYHGLYAAVEHDRPVNLKQLIDGKSSANVA >gi|333596725|gb|GL892087.1| GENE 1288 1431374 - 1431724 310 116 aa, chain + ## HITS:1 COG:STM2854 KEGG:ns NR:ns ## COG: STM2854 COG0375 # Protein_GI_number: 16766160 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Salmonella typhimurium LT2 # 1 115 1 115 118 162 76.0 2e-40 MHEITLCQRALELIEQQAVQNHAKRVTGVWLKVGAFSCVETSALTFCFELVCRGTLAEGC ELHIEEQQAECWCEQCQEYVTLLSSKVQRCPQCQSSGLRIVADDGMQIQRLEIEKE >gi|333596725|gb|GL892087.1| GENE 1289 1431728 - 1432591 1019 287 aa, chain + ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 1 287 1 290 290 511 84.0 1e-145 MCSTCGCAEGNLYIEGDEHRPHSAFRSAPFSPAPRPAAALTGITFAPQRSDAGDLHYGYG EAGTHAPGISQRQMLEVEINVLDKNNQLAARNRARFAARKQLVLNLVSSPGSGKTTLLTE TLKRLNKRVSCAVIEGDQQTVNDAARIRETGTPAIQVNTGKGCHLDAQMIADAAPRLPLA DNGILFIENVGNLVCPASFDLGERHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLL PYLNFDVDKCLAYAREVNPDIEILLVSATRGDGMDGWLNWLESERCA >gi|333596725|gb|GL892087.1| GENE 1290 1432582 - 1432854 319 90 aa, chain + ## HITS:1 COG:STM2856 KEGG:ns NR:ns ## COG: STM2856 COG0298 # Protein_GI_number: 16766162 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 157 90.0 3e-39 MCIGVPGQIHSIDGNQAKVEVCGILRDVDLTLVGSTDETGASRLGQWVLVHVGFAMSVIN EEEARDTLDALQNMFDVEPDVGALLYGEER >gi|333596725|gb|GL892087.1| GENE 1291 1432858 - 1433979 875 373 aa, chain + ## HITS:1 COG:ECs3585 KEGG:ns NR:ns ## COG: ECs3585 COG0409 # Protein_GI_number: 15832839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 373 1 373 373 681 86.0 0 MRYVDEYRAPEQVLQLIERLKTRASLLDYTQEKPLRIMEVCGGHTHAIFKFGLDQLLPEN IEFIHGPGCPVCVLPMGRIDSCLDIASRPGVIFCTFGDAMRVPGKNGSLLQAKARGADVR IVYSPMDALTLAMDNPERKVVFFGLGFETTMPATAITIQQAKARNVTNFYFFCQHITLIP TLRSLLEAPDNGIDAFLAPGHVSMVIGTEAYGFIAEQYNRPLVVAGFEPLDLLQGVAMLV EQKIAALSTVENQYRRVVPDAGNRRAQQAIADVFSVEGDSEWRGLGLITGSGVHLTPAYR AFDAEAHFRPQPQQVCDDPRARCGDVLTGKCKPHHCPLFGNACNPQTAFGALMVSSEGAC AAWYQYRNQECEA >gi|333596725|gb|GL892087.1| GENE 1292 1433976 - 1434986 1124 336 aa, chain + ## HITS:1 COG:ECs3586 KEGG:ns NR:ns ## COG: ECs3586 COG0309 # Protein_GI_number: 15832840 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 15 336 1 322 322 539 86.0 1e-153 MNTVEMAHGSGGQAMQQLINRLFMDAFDNPWLAEQEDQARIALSTLTAHGDRLAFSTDSY VIDPLFFPGGDIGKLAVCGTANDVAVSGALPRYLSCGFILEEGLPMETLTAVVNSMARTA REAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPAGIHWGAQQLCAGDVLIVSGTLGCHG ATILNLREGLGLDGELRSDCAVLTPLIQALRDMPGVKALRDATRGGVNAVVHEFAASSGC GIELTERGLPVKPAVRGLCELLGLDPLNFANEGKLVIGVERSAAEAVLAQLRAHPLGKDA AIIGDVVERKGVRLTGLYGVKRTLDLPHAEPLPRIC >gi|333596725|gb|GL892087.1| GENE 1293 1435064 - 1437121 2526 685 aa, chain + ## HITS:1 COG:STM2859 KEGG:ns NR:ns ## COG: STM2859 COG3604 # Protein_GI_number: 16766165 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Salmonella typhimurium LT2 # 1 684 6 691 692 1166 85.0 0 MSDLGQQGLFDITRTLLQQPDLGALSDTLTRLVRQSALADSAAIVLWHSATHRASYFSTR DNGKIFEYEDETFLAHGPVRRILSRPEALHCNYDQFRQAWPKLAESNLYRPFGHYSMLPL AVEGQIFGGCEFIRNTDQPWSEAEYERLHTFTQIVAVVAEQIQSRVTNNVDYDLLSRERD NFRILVAITNAVLSRLDMDELVSEVSKEIHHYFKIDAISIALRGNRKGKLNIYSTHYLDE ANPAHEQSEVDEAGTLSERVFKSKEILLLNLSEQDPVAPYERMLFNTWGNKIQTLCLLPL MSGNTMLGVLKLAQCDEAVFTTANLKLLRQIAERISIALDNALAYQEIHRLKERLVDENL ALTEQLNNVDSEFGEIIGRSDAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNL SNRNSRRMVKMNCAAMPAGLLESDLFGHERGAFTGASSQRLGRFELADKSSLFLDEVGDM PLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVF PICLPPLRERPEDIPLLVKAFTAKIARRMGRNIDSIPAETLRTLSAMEWPGNVRELENVI ERAVLLTRGNVLQLSLPEVALPETPVAATALAKEGEDEYQRIMRVLKETNGVVAGPKGAA QRLGLKRTTLLSRMKRLGIDKESLL >gi|333596725|gb|GL892087.1| GENE 1294 1437272 - 1438270 1112 332 aa, chain + ## HITS:1 COG:BMEII0535 KEGG:ns NR:ns ## COG: BMEII0535 COG0614 # Protein_GI_number: 17988880 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Brucella melitensis # 16 332 27 343 344 275 45.0 6e-74 MKKVLCALGLAVASMSTALATTYPLTIENCGYKETFTKAPERVVALGQNTVEILLLLGLE DKVKASAFWPTKVLPQLAEQNAKIKTLTVEIPTLESILAQNPDFVPAQLPLLLGPESKVA KREDLATVGVNSYLSPGMCATKKAAGDMYGSRQALWDMTYLYKEIEDFAKIFNVEARGQA VIADFKKREADLRQEFGKNKKDLSFVFWFSSSSPSADAYVGGKNSASGFIANVLGGHNAI TSESEWPTVGWESIIAANPDVIVVSSLDRNRWALDNAEEKIKFLKSDPAVSQLDAVKKGH IVVMDGQAMNPTIRTLYGAEQVGEQLRKLGLN >gi|333596725|gb|GL892087.1| GENE 1295 1438270 - 1439307 1188 345 aa, chain + ## HITS:1 COG:SMb20057 KEGG:ns NR:ns ## COG: SMb20057 COG0609 # Protein_GI_number: 16263805 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Sinorhizobium meliloti # 6 345 7 346 347 278 54.0 8e-75 MTAAVLQARQGLFLTTSALLAVVLLFLVIALGVSVGELSIPLSNVFYAIGNKLGLTDVPL NRIYESVIWDFRLSRALVAACCGAGLAICGAVLQSLLKNALAEPYVLGVSAGASTGAVSV VVLGIGTGAVSLSAGAFAGAFAAFAFVAFLTNGARGGNERTILAGVAASQLFNAITAYTI STSASAQQARDVMFWLLGSFSGVRWPEFQLALVVVLAGLAVCLYYSRALDAFTFGDDAAA SLGIAVPWVRLALFTTTALITATIVSMAGSIGFVGLVVPHLMRFLFGPLHRTLLIASALA GAILMVLADIASRMLIAPQSLPVGVVTALVGVPFFAVIIYRSRNK >gi|333596725|gb|GL892087.1| GENE 1296 1439304 - 1440068 198 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 225 278 509 563 80 27 2e-13 MMSICADNITWKVGKKVIVNNVSLKVARGETVGLLGPNGCGKSSLLRILAGLRRPDAGCV TLDGQDIARIAKKQLARRVAFVEQHGMTDANMRVRDVVKLGRIPHHSPFSNWSAQDDETV TAALQRVDMLDRSEQGWQSLSGGERQRVHIARALAQTPTEILLDEPTNHLDIHHQMQLMQ LISELPVTSIVAIHDLNHASMFCDSLIVMQQGQIVATGTPQEILSEALLWDVFRVKTRIE ISPYHGKKHIHFIV >gi|333596725|gb|GL892087.1| GENE 1297 1440084 - 1441304 1180 406 aa, chain + ## HITS:1 COG:Rv0849 KEGG:ns NR:ns ## COG: Rv0849 COG0477 # Protein_GI_number: 15607989 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis H37Rv # 13 380 16 382 419 140 34.0 3e-33 MPLRPAATLWPPVLLGSQFVFNIGFYAVVPFLAIFLRDDMLLSGGLIGLVLGLRTFSQQG MFIVGGALSDRFGAKSVILSGCIVRVAGYLLLAFGQSLWPIILGACLTGVGGALFSPSIE ALLAKAGTQSEAKGKRSRAEWFALFAVCGELGAVLGPVMGALLTGLGFRQVALAGAGIFI VALIVLFFCLPAAHHSTKPLKILPWWTTFRQPRFVAFIIAYSSWLLSYNQLYLALPVEIQ RAGGNEKDLGPLFMLASVLIIVLQLPLARFARKVGAVRILPVGFLLLSAAFATVALFAAT APPEGWLRLLPSASLVTLLTLGQMLLVPSAKDLIPLFAEESTLGAHYGALSTAGGVAVLA GNLALGGLLDKALVPSTQAIYPWLLLAVFPLCSAIALSVICRPLRR >gi|333596725|gb|GL892087.1| GENE 1298 1441310 - 1441681 299 123 aa, chain - ## HITS:1 COG:no KEGG:ECL_04076 NR:ns ## KEGG: ECL_04076 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 10 123 1 114 114 195 91.0 6e-49 MHFIVGDDVMSGKRILREKKTIARMIALYENRCPQAIKEEGHYPALNAYADKRLDKCVFG EEKPACKQCPVHCYQPARREEMKQVMRWAGPRMLWRHPILTIRHLIDDRRPVPELPEKYR PKK >gi|333596725|gb|GL892087.1| GENE 1299 1441830 - 1442060 244 76 aa, chain + ## HITS:1 COG:no KEGG:ECL_04077 NR:ns ## KEGG: ECL_04077 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 76 1 76 81 119 85.0 3e-26 MQEIAIAKPYRHLKVGYFRKRHEDRKTKIPKRYSVHAALSLKGDWLEKAGFTTNSQVRVG VEHGKIIIELMAEDAS >gi|333596725|gb|GL892087.1| GENE 1300 1442174 - 1444735 3054 853 aa, chain + ## HITS:1 COG:STM2909 KEGG:ns NR:ns ## COG: STM2909 COG0249 # Protein_GI_number: 16766215 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Salmonella typhimurium LT2 # 6 853 8 855 855 1555 94.0 0 MSTIDNFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA SAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTIS DEALLQERQDNLLAAIWQDGKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY AEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLIGFGVENAPRGLCAAGCL LQYVKDTQRTALPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGIENTLASVLDSTVT PMGSRMLKRWLHMPIRNTDTLIGRQQTIAALQDRYTELQPVLRQVGDLERILARLALRTA RPRDLARMRHAFQQLPELRAQLGEIDSAPVQKLRETMGEFTELRELLERAIIDAPPVLVR DGGVIAPGYNEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRG QSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDILMPHLA DLQLSAAALAELDVLVNLAERADTLNYTCPAFTDKPGIRITEGRHPVVEQVLNEPFIANP LNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPVDRIFTRVGAA DDLASGRSTFMVEMTETANILHNATENSLVLMDEVGRGTSTYDGLSLAWACAESLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHTVQDGAASKSYGLAVAALAG VPKEVIKRARQKLRELESLSPNAAATQIDGTQMSLLAAPEETSPAVEALENLDPDSLTPR QALEWIYRLKSLV >gi|333596725|gb|GL892087.1| GENE 1301 1444829 - 1445050 293 73 aa, chain - ## HITS:1 COG:no KEGG:SC2853 NR:ns ## KEGG: SC2853 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 73 1 73 84 132 91.0 4e-30 MICPRCADEHIEVMATSPVKGVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI DEAPQVPTIPPLL >gi|333596725|gb|GL892087.1| GENE 1302 1445061 - 1446488 1766 475 aa, chain - ## HITS:1 COG:ECs3592 KEGG:ns NR:ns ## COG: ECs3592 COG0043 # Protein_GI_number: 15832846 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 475 1 475 475 939 96.0 0 MAFDDLRSFLQALDEQGQLLKIEEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA RVVMNTIGSWQNHAISMGLPANTSVKKQIDEFIRRWDKFPVTPERRANPAWAQNTVDGED INLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDHFGKQNVGIYRMEVKGKRKLGLQPV PMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA TAPLTGFDVPWGSEVILEGVIEGRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTKPI FESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGF ARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLE LDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVQDLPETKAWAEKLTAMLAARQ >gi|333596725|gb|GL892087.1| GENE 1303 1446478 - 1447080 723 200 aa, chain - ## HITS:1 COG:ECs3593 KEGG:ns NR:ns ## COG: ECs3593 COG0163 # Protein_GI_number: 15832847 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 338 86.0 3e-93 MRLIVGMTGATGAPLGVALLQALREMPEVETHLVMTKWAKTTIELETPFTAHDVAALADV VHSPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYAEGLVGRAADVVLKEGRKLVLV PRETPLSTIHLENMLALSRMGVAMVPPMPAYYNHPQTADDITQHIVTRVLDQFGLEHKKA RRWEGLQAAKHFSQENKDGI >gi|333596725|gb|GL892087.1| GENE 1304 1447254 - 1447661 387 135 aa, chain + ## HITS:1 COG:STM2920 KEGG:ns NR:ns ## COG: STM2920 COG1846 # Protein_GI_number: 16766226 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 133 1 133 134 179 75.0 1e-45 MELRQEAFHLLRQLFQQHTAQWQHALPELTKPQYAVMRSIAENPGIEQVALTEVAVSTKA TLAEMLSRMEARGLVRREHDPADKRRRFVFLTAEGEALLERSKPIGNEVDEAFLGRLNGA EREQFSALIKKMMQD >gi|333596725|gb|GL892087.1| GENE 1305 1447658 - 1448545 715 295 aa, chain - ## HITS:1 COG:STM2912 KEGG:ns NR:ns ## COG: STM2912 COG0583 # Protein_GI_number: 16766218 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 291 8 298 310 392 69.0 1e-109 MLSLQRTEMFIAVADTGSFTAAAEAMGLTKAVVSFHIRQLEEELGVTLLLRTTRRLTLTE AGKLFHQRSVVLLRDAERLQDDVRANHAGLTGELRITTTPEYGSQVVVPLLAEFSQLHPD LRVRHVSSSLHADLIAERFDVAIRLGTLADSRYHAALMTSFTILPVATPGWLANHPVDSL DQLAEADWIIHERLTSPLRWQVRGVDRHPVSFEIKKAPRLYADSAQALMAFALAGCGVAL LPEWLVRNALDAGELVSLLPAYTFAQQGIYAVYPDARHVPAKVRTFIDFMRVRVT >gi|333596725|gb|GL892087.1| GENE 1306 1448655 - 1449857 779 400 aa, chain + ## HITS:1 COG:STM2911 KEGG:ns NR:ns ## COG: STM2911 COG0477 # Protein_GI_number: 16766217 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 400 1 402 402 448 64.0 1e-126 MTYRSKIAVVFLLGFFLDLINMFIASVAFPAMARAFNTTPSALAWVSNGYIAGLTLVIPF SSILTRRIGPKRVILLSLLLFSAASVAAGLSSSLESLIAWRVVQGAGGGLLIPVGQALTW QQFKPHERARLSSAVMLVALLAPACSPAVGGMLVQAFSWRWIFFATLPVAIVTFALACAW LKTEPSPINTTRTVNLSLLTDPLLRLSMLIYVCVPGIFIGVNVTGMYYLQSEANMTPAAT GMLMLPWSVASFLAITATGRYFNRIGPRPLVVIGCLLQATGILLLINVGPAMLLPAVAFA LMGAGGSLCSSTAQSSAFLTMRPEDMPDASALWNLNRQLSFFAGALLLAQALSFMQDYLA PLAAWHWMFVFAAVITLLPVLYVYRLNNTQLLAQLQQEQA >gi|333596725|gb|GL892087.1| GENE 1307 1449854 - 1450231 246 125 aa, chain + ## HITS:1 COG:STM2910 KEGG:ns NR:ns ## COG: STM2910 COG4460 # Protein_GI_number: 16766216 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 122 1 122 126 120 49.0 7e-28 MTHFEQEILDIHVALENWLGAGEGDQDALLARFRPDFLMIPPSGNPLDHHALAHFLYAQR GTRPGLRIGIDALTTLQTWDNGAVLHYRETQTRPGQPVNVRWSTAVLNQEGDNITWRLLH ETAQP >gi|333596725|gb|GL892087.1| GENE 1308 1450282 - 1451274 1256 330 aa, chain - ## HITS:1 COG:ECs3595 KEGG:ns NR:ns ## COG: ECs3595 COG0568 # Protein_GI_number: 15832849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 569 98.0 1e-162 MSQNTLKVHDLNEDAEFDENGAEAFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD EKDNGPEDTTQDDDMKQSIVKWLFEPNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE RVRQIQVEGLRRLREILQGQGLNIEALFRE >gi|333596725|gb|GL892087.1| GENE 1309 1451334 - 1452458 528 374 aa, chain - ## HITS:1 COG:STM2925 KEGG:ns NR:ns ## COG: STM2925 COG0739 # Protein_GI_number: 16766231 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 1 374 1 377 377 488 78.0 1e-138 MSAGSPKFTISRVAALSLVSLWLAGCTNSNNAPAPVSSVNGTSGSGNTSSGMLITPPPKM GTSTAQQTPQIQPVQRPVTQPSQIQPVDQPVQTENGRIVYNRKYGNIPKGSYTGGSTYTV KRGDTLFYIAWITGNDFRDLAQRNNVQAPYALEVGQTLQVGNATGTPLTPGNTVSAADVT AQNNSVTPAQKTTTVVASQPVITYSEDSGDQSANKMLPNNKGTATVVTAPTTAPVVSSTV PTASSQNASSSITTWRWPTDGKIIENFATSEGGNKGIDIAGSKGQAIIATADGRVVYAGN ALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRY KGKSVNPLQYLPQR >gi|333596725|gb|GL892087.1| GENE 1310 1452575 - 1453201 444 208 aa, chain - ## HITS:1 COG:STM2926 KEGG:ns NR:ns ## COG: STM2926 COG2518 # Protein_GI_number: 16766232 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 377 94.0 1e-105 MVSKRVQTLLEQLRAQGIRDEHVLEALAQVPREKFVDEAFEHKAWENVALPIGQGQTISQ PYMVARMTELLELTPDSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQL DLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPAALLSQLDEGGILVLPVGDEQQLLK RVRRRGGEFIIDTVEAVRFVPLVKGELA >gi|333596725|gb|GL892087.1| GENE 1311 1453195 - 1453956 532 253 aa, chain - ## HITS:1 COG:ECs3598 KEGG:ns NR:ns ## COG: ECs3598 COG0496 # Protein_GI_number: 15832852 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 471 92.0 1e-133 MRILLSNDDGIHAPGIQTLAKHLREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD IAVQMGTPTDCVFLGVNALMRPRPDVVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLNGHTHYDTAAAVTCSLLRALGREPLRTGRILNINVPDLPLDEIKGIRVTRCGSRH PADQVIPQQDPRGNTLYWIGPPGDKCDAGPDTDFAAVDEGYVSVTPLHVDLTAYSAHDVV SDWLDRVGVNAQW >gi|333596725|gb|GL892087.1| GENE 1312 1453937 - 1454986 912 349 aa, chain - ## HITS:1 COG:ECs3599 KEGG:ns NR:ns ## COG: ECs3599 COG0585 # Protein_GI_number: 15832853 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 614 86.0 1e-176 MTDFDNLTYLHGKPQGNGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK LRLGALKGNHFTLVLREVTNREDVEKRLNAVCERGVPNYFGAQRFGIGGSNLLGALRWAQ SDAPVRDRNKRSFWLSAARSALFNQMVSERLKKPDANQVVVGDALQLAGRGSWFVATAEE MADAQSRVDAKALMITAALPGSGDWGTQGEALAAEQSAVADAPELQSLLVREKVEAARRA MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE >gi|333596725|gb|GL892087.1| GENE 1313 1454983 - 1455462 751 159 aa, chain - ## HITS:1 COG:ECs3600 KEGG:ns NR:ns ## COG: ECs3600 COG0245 # Protein_GI_number: 15832854 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 285 98.0 2e-77 MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLVKAAK >gi|333596725|gb|GL892087.1| GENE 1314 1455462 - 1456172 303 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 227 6 223 234 121 36 1e-25 MAATFSDVCAVVPAAGFGRRMQTECPKQYLSIGDKTILEHAVAALLAHARVKRVVIAISP GDARFAQLPLANHPQITVVDGGAERADSVLAGIQAAGNAQWVLVHDAARPCLHHDDLSRL LALSETSKVGGILAAPVRDTMKRAEPGKPAIAHTVERVDLWHALTPQFFPRELLHDCLTR ALKEGATITDEASALEYCGFHPTLVEGRADNIKVTRPEDLQLAEFYLTRTTPQEKA >gi|333596725|gb|GL892087.1| GENE 1315 1456192 - 1456503 358 103 aa, chain - ## HITS:1 COG:ECs3602 KEGG:ns NR:ns ## COG: ECs3602 COG2919 # Protein_GI_number: 15832856 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Escherichia coli O157:H7 # 16 103 16 103 103 151 89.0 2e-37 MGKLTLLLLALLVWLQYSLWFGKNGLHDYSRVSDDVAAQQATNAKLKARNDQLFAEIDDL NGGQEAIEERARNELSMTKPGETFYRLVPDASKRNQGSAQNNR >gi|333596725|gb|GL892087.1| GENE 1316 1456583 - 1456909 441 108 aa, chain - ## HITS:1 COG:no KEGG:ECL_04098 NR:ns ## KEGG: ECL_04098 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 108 1 108 108 148 89.0 8e-35 MRNSENYMITTGSEPLTTDDETTWSFPGAIVGFVSWLLALGIPFLIYGGNTLFFFLYTWP FFLALMPVAVVVGVALHSLFNGKLLYSTLITIATVVVIFGLLFLWLMG >gi|333596725|gb|GL892087.1| GENE 1317 1456968 - 1457573 704 201 aa, chain - ## HITS:1 COG:STM2933 KEGG:ns NR:ns ## COG: STM2933 COG0529 # Protein_GI_number: 16766239 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Salmonella typhimurium LT2 # 1 201 1 201 201 364 88.0 1e-101 MAAHDENVVWHPHPVTVAQREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQQGVSTY LLDGDNVRHGLCSDLGFSDDDRKENIRRVGEVASLMADAGLVVLTAFISPHRAERQMVRE RVGQDRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESPEIHLEGQQ LVTNLVSQLLDLLRRDDIIRS >gi|333596725|gb|GL892087.1| GENE 1318 1457573 - 1458997 2016 474 aa, chain - ## HITS:1 COG:cysN KEGG:ns NR:ns ## COG: cysN COG2895 # Protein_GI_number: 16130658 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Escherichia coli K12 # 1 474 1 475 475 835 88.0 0 MNTTIAQQIADEGGVEAYLHAQQYKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY TRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAVNKMDLVDYSEARF DEIRQSYLTFAEQLPGNLDIRFVPLSALEGDNVASQSANMPWYSGPTLLEVLETVEIQRV VDTQPMRFPVQYVNRPNLDFRGFSGTLASGAVKVGQRVKVLPSGVESAIARIVTFDGDLD EAGAGEAVTLVLKDEIDISRGDLLVDAQETLAAVQGASVDVVWMAEQPLTAGQSYDIKIA GKKTRARVDGIQFQVDINNLTHRDVSELPLNGIGLVDLTFDEPLVLDPYQQNPVTGGLIF IDRLTNVTVGAGMVREPNAQASVTSEFSAFELELNALVRKHFPHWGARDLLGGK >gi|333596725|gb|GL892087.1| GENE 1319 1459007 - 1459915 1302 302 aa, chain - ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 610 97.0 1e-174 MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES IRVFPLSNWTELDIWQYIYLENIEIVPLYLAAERPVLERDGMLMMIDDDRIDLQPGEVIK KQMVRFRTLGCWPLTGAVESSAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQG YF >gi|333596725|gb|GL892087.1| GENE 1320 1459925 - 1461283 1449 452 aa, chain - ## HITS:1 COG:YPO3367_2 KEGG:ns NR:ns ## COG: YPO3367_2 COG0007 # Protein_GI_number: 16123517 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Yersinia pestis # 196 452 11 268 268 330 69.0 5e-90 MDYLPLFAALKDRPVLVVGTGEIADRKIAFLQRAGAQVQAVPEADFEESQIDNVVLVIAA TEDRALNRRISGAAQARHRLVNVVDDQPLCSFIFPSIVDRSPLLVAISSGGTAPVLARVL REKIEALLPTSLGRMAEKASYWRNHLKTRLTSVTERRRFWERVFRGRFASLMQAGNETAA QKILEDELDNPGSTSGEIILVGAGPGDAGLLTLRGLQVLQDADVVFYDHLVTDGIRELIR RDAEQICVGKRAGEHSVPQHDTNQMLIAAAKAGKTVVRLKGGDPFIFGRGGEELQAAAEA GVPFQVVPGITAASAVTAYAGIPLTHRDFAQSVTFVTGHYKADSTPFDWSHLAQSRQTLA IYMGTMKAADISEQLIQHGRDATTPVAVISRGTRVDQHVAIGTLQDLATLAKDAPMPALI VVGEVVQLHSTLAWFQHTTDTEGFGASVINLA >gi|333596725|gb|GL892087.1| GENE 1321 1461521 - 1462564 953 347 aa, chain + ## HITS:1 COG:ECs3607 KEGG:ns NR:ns ## COG: ECs3607 COG2234 # Protein_GI_number: 15832861 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli O157:H7 # 1 344 1 344 345 571 80.0 1e-163 MFSAMRHRFVALALGVCFILPAQAKNQTYGEIASMQARHIATVFPGRMTGTPAEMLSADY IRQQFADMGYKSDIRAFHSRYIYTSRNKTQNWHNITGSTVIAAHEGKAAEQIIIMAHLDT YTPMSDADVDNNLGGLTLQGLDDNAAGLGVMLELAERLKNIPTKYSIRFVATSGEEEGKL GAENLLKRMSAEEKKNTLLVINLDNLIVGDKLYFNSGQSTPSSVRKLTRDRALALARTHG VYAATNPGGNPDYPKGTGCCNDGEVFDKAGIPVLYVEATNWTLGKKDGYQQRSKSKAFPD GTSWHNVRLDNQQHIDKALPQRIEHRSRDVVKVMLPLVKELAKAGKA >gi|333596725|gb|GL892087.1| GENE 1322 1462658 - 1463392 1117 244 aa, chain - ## HITS:1 COG:cysH KEGG:ns NR:ns ## COG: cysH COG0175 # Protein_GI_number: 16130669 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 244 1 244 244 473 94.0 1e-133 MSVLDLNALNDLPKVERILALAETNAQLEKLDAEGRVAWALENLPGDYVLSSSFGIQAAV SLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLGLNLKVYRATESAAWQEARYGKL WEQGVEGIEKYNAINKVEPMNRALKELNAQTWFAGLRREQSGSRAKLPVLAVQRGVFKVL PIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECG LHEG >gi|333596725|gb|GL892087.1| GENE 1323 1463408 - 1465120 2253 570 aa, chain - ## HITS:1 COG:STM2947 KEGG:ns NR:ns ## COG: STM2947 COG0155 # Protein_GI_number: 16766253 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Salmonella typhimurium LT2 # 1 570 1 570 570 1143 95.0 0 MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ DDRDIRAERAEQKLEPRHAMLLRCRLPGGIITTTQWQAIDKFAHDNTIYGSIRLTNRQTF QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEH LLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRT DRKNAKTKYTLERVGVETFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTL FIENGRILDYPGRPLKTGLLEIAKIHKGEFRITANQNLIVASVPESDKARIEELAREHGL MDAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCP NGCGRAMLAELGLVGKAPGRYNLHLGGNRIGTRIPRMFRENITEPEILDSLDVLIGRWAK EREVGEGFGDFTVRAGIIRPVLDPARDFWE >gi|333596725|gb|GL892087.1| GENE 1324 1465120 - 1466925 1991 601 aa, chain - ## HITS:1 COG:cysJ KEGG:ns NR:ns ## COG: cysJ COG0369 # Protein_GI_number: 16130671 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Escherichia coli K12 # 1 601 1 599 599 1077 90.0 0 MTTQAPPSNLLPLNPEQLARLQAATSDFSPTQLAWVSGYFWGMLNQQPGAVAGASPTAVE IPAITLISASQTGNARRVAEALRDDLLAAKLNVNLVNAGDYKFKQIASEKLLVVVASTQG EGEPAEEAVALHKFLFSKKAPKLEGTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGAERL LDRVDADVEYQAAAAEWRARIVEVLKARVPKETPAQAAVTAAGTVNEIHTSPYTKEAPLT ASLSVNQKITGRDSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKG TEPVQVEGKTLPLSEALQWHFELTVNTANIVENYATLTRSESLLPLVGDKAKLQHYAATT PIVDMVRFSPAQLDADALIGLLRPLTPRLYSIASSQAEVESEVHITVGVVRYDIEGRARA GGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADD APGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAE LWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDAETADEFLSELRVERRYQRDV Y >gi|333596725|gb|GL892087.1| GENE 1325 1467232 - 1467594 436 120 aa, chain + ## HITS:1 COG:STM2949 KEGG:ns NR:ns ## COG: STM2949 COG0720 # Protein_GI_number: 16766255 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Salmonella typhimurium LT2 # 1 120 1 120 120 241 93.0 2e-64 MSTTLFKDFTFEAAHHLPHVPAGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFAELKAA FKPTYDRLDHYYLNDIPGLENPTSEVLAKWIWDQMKPLVPLLSAVMIKETCTAGCVYRGE >gi|333596725|gb|GL892087.1| GENE 1326 1467579 - 1469933 1516 784 aa, chain - ## HITS:1 COG:lin2953_2 KEGG:ns NR:ns ## COG: lin2953_2 COG3664 # Protein_GI_number: 16802012 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Listeria innocua # 423 767 86 433 437 190 30.0 9e-48 MAQRGDEFWIEIQDIRHCVEDEGDTLTLLWVLEGRGELNTDVGRDILEANSLAIINRHRR WQFTSETANVTLRVTLSGRWVVQLCNDFFAHDYAVPAEAGGVWPQCDALRDLLRQLLVVT LINDPHRYRLEAYRGLSEILLLLTSRFQQPARMLSRELSSAHSKRIARVIERINASYSRR ITLAEIAASEYVSEAWLSRLFRKEVGISFMQYITHLRLEKAADALRLTNRPLHQIALEQG FASTRMMSDQFRRVHNMSPGEFRKTRRQHPEAARVRTDRREQRFPVAVDKLFSLLNEPVA RGWGASPLIVHPQQEQKLDLEQLNPLSSSLRRMRVVITLRELDDLLREDVRHHLEAINEA IPIEGIDIAEPFLSSRLFAAGWDDPQMAGYACWYNLHQLFTWLAKKQWTVLLHTGVTTRR DLLTRFLQQSVNHFSPEITAGWHFVMHWSTQASEETREQVWLAQQKAIRTYLPQAKFGLW HRFAPVSASVSEDTLFSSAILMQADFLACSADANELLDPAQMEATPLSSTENYPIMKVRQ ILAALRLRKCSLPVWLLSWNTLTGNTRATNGWFFRGALLMQNLLGLSEQVWLAGFWLNSG LQGEARANNTIDTSSLALQYNHGLPRPVYWVLWLWQRLRGEVLVNDKRVLLTRHLNGYQL LLRNVVVFNPLLSSEEAFIQRFRQQYHLHLKGMRGKWRIKCHLFDQHNGALYPLLEGVGS ESGPDEEMWRWIAHKARPTLSVRDERLYDGWQLTESLESNALVLYEFTPLVPREAETEEI HSPR >gi|333596725|gb|GL892087.1| GENE 1327 1469991 - 1471274 1189 427 aa, chain + ## HITS:1 COG:ECs4892 KEGG:ns NR:ns ## COG: ECs4892 COG1473 # Protein_GI_number: 15834146 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 47 427 6 388 388 440 55.0 1e-123 MKNNQNKAVDLQQKSAFSGGTIVIDSKLSLFGMKRITKMTHPVLEALRGNEAQFTELRRY FHQHPEIGFEEHNTSDRVAALLQEWGYEVHRGLAKTGVVGTLKVGNGDKRLGLRADMDAL PMQENNGKAWSSTVEGKFHGCGHDGHTTMLLYAAEYLARTRNFNGTLHLIFQPAEELLYG GRVMLEDGLFDLFPCDHIFGLHNMPSQPVGKIGLRDGAMMASSDTLHIEVNGVGGHGAVP EHTVDATLVACHITLALQSIVSRNITPFQPAVVTVGSIQAGHAPNIINDKVLMKLTVRTL DENVRQTVLQRIHDIAVAQAESFNATATIRHINGSPVLKNNPQANEMVRNVAIDLFGQDA VAEVNAFMGSEDFAFMLEKNPNGCYFTLGAGDEPDRCMVHNPGYDFNDTLLLNGAALWAA LTEHYLR >gi|333596725|gb|GL892087.1| GENE 1328 1471302 - 1472699 1057 465 aa, chain + ## HITS:1 COG:lin2951 KEGG:ns NR:ns ## COG: lin2951 COG0477 # Protein_GI_number: 16802010 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 9 462 3 456 466 415 52.0 1e-115 MSTVSLTGASAYAGNDRLLAGIVMSVLTFWLFAQSVINVVPAMQNSLDIALETLTLAVSL SALFSGCFVVACGGFADKFGRMRLTMIGLILSIIGSGLLFISWEPVLFLLGRAIQGLSAA CIMPATLALIKTWYEGKARQRAISFWVIGSWGGSGLSSFVGGAIATTLGWRWIFVLSMVV ALAALLLIRATPESRSPDACRHKLDISGLVSFVLMLVLFNLFISKGHSWGWSSSLSLLVL CGAVIALMCFVMTGRRKGDAALIDFALFKNRAYSASVFSNFLLNGCIGTMMIASIWLQQG HHLSPLQTGMMTLGYLVTVLAMIRVGEKLLQRYGARLPMMTGPLLTATGITLISCTFLSK EVYIVTVFLSNILFGLGLGCYATPSTDTAVMNAPENKVGVASGIYKMGSSLGGAMGIAVT ASLYALWLPMGTASAAQYALLFNSAICLGSAVVTWALLPKTKAPR >gi|333596725|gb|GL892087.1| GENE 1329 1472717 - 1473388 218 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 88 29 9e-16 MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLADREVSLFSILAK TKESDKWGAGSAEDLLAIIGRQGWTARHVVITGGEPCIHDLMPLTELLEKNGYSCQIETS GTHEVRCSHSTWVTVSPKVNMRGGYDVLSQALERADEIKHPVGRVRDIEALDELLATLTD EKQRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA >gi|333596725|gb|GL892087.1| GENE 1330 1473443 - 1474150 685 235 aa, chain - ## HITS:1 COG:lin2933 KEGG:ns NR:ns ## COG: lin2933 COG3010 # Protein_GI_number: 16801992 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Listeria innocua # 3 227 4 228 231 251 55.0 8e-67 MKTVLDNLKGKLVVSCQALENEPLHSPFIMSRMALAAAQGGAAAIRANSVVDIEAIKGQV SLPVIGIIKRDYPDSEVFITATLKEVDELMAVAPDIVALDATARKRPGGGSLATLIAQIR ARYPSLLLMADIATVQEAVTAQALGFDCVGTTLYGYTAETAGHSLPENDCAFLKEVLSAV TIPVIAEGNVDTPERAARCLALGAHTVVVGGAITRPQQITQRFMAAIGAQSTDGA >gi|333596725|gb|GL892087.1| GENE 1331 1474150 - 1475709 1697 519 aa, chain - ## HITS:1 COG:SA0233_1 KEGG:ns NR:ns ## COG: SA0233_1 COG1263 # Protein_GI_number: 15925945 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 14 446 5 435 437 544 67.0 1e-154 MMQMFSGASSGGWFEKAQRFGKSFMLPIAILPAAGLLLGIGGALSNPNTLTAYPFLNVGW LQAIFTIMSSAGSIVFANLSVLFAVGVAVGLAKNDKGTAGLAALLAYLVMNATINALLIL TGKLAHENPGAVGQGMTLGIQTLETGVFGGVVIGLVTCALHHRFNKIALPQFLGFFGGSR FVPIISSLAAILVGALMTVVWPHFQKLIFGLGGLVDATGYLGTLLYGFILRMLGPFGLHH IFYLPFWTTALGGSEIVNGHLVEGTQRIFFAQLADPNTQHFYEGTSRFMSGRFITMMFGL LGACLAMYHTARPENKKRVAGLLLSAALTSFLTGITEPVEFSFLFIAPVLYVIHALFDGL AFMLAHILNITIGQTFSGGFIDFVLFGILQGEAKTHWMFVPLVGVPWFFLYYCTFRYLIK RFDFATPGREKEAVADEATLAQSERAAAVIAGLGGKDNLDDVDCCATRLRVTVKDGSKVN ESALKATGARGVIVRGNGVQVIYGPHVTIIKNEVEEILS >gi|333596725|gb|GL892087.1| GENE 1332 1475876 - 1476700 754 274 aa, chain + ## HITS:1 COG:VC1775 KEGG:ns NR:ns ## COG: VC1775 COG1737 # Protein_GI_number: 15641778 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 1 273 1 276 278 205 43.0 1e-52 MSDHENLLLKLRQEASGYSPTQQKLGEFVLNDPGRVLYLTITELARESHTSEASVTRLCR TLGCKGYNEFKMALALDIQQGLPERQAGDAIDNVVDESVQALQDTAKLLDRAQLEQATLA LHQAQSVQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKETLVVAISS SGSTRDLLHVVKLARKRGVKVLALSNTPRSPLASLSDLQLVAAKPEGPLSAGALNAKVGV MLLVELLTTSLIAIDSHYGDVSQQTASATLPLLL >gi|333596725|gb|GL892087.1| GENE 1333 1476753 - 1478051 1437 432 aa, chain - ## HITS:1 COG:STM2952 KEGG:ns NR:ns ## COG: STM2952 COG0148 # Protein_GI_number: 16766258 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Salmonella typhimurium LT2 # 1 432 1 432 432 749 97.0 0 MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFM GKGVLKAVGAVNGPIAQAIVGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAK AAAAAKGMPLFEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTLK EAVRMGSEVFHNLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD ITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEDLTKQYPIVSIEDGLDESDWDG FAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIVNSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKA PYNGRKEIKGQA >gi|333596725|gb|GL892087.1| GENE 1334 1478134 - 1479771 1773 545 aa, chain - ## HITS:1 COG:STM2953 KEGG:ns NR:ns ## COG: STM2953 COG0504 # Protein_GI_number: 16766259 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Salmonella typhimurium LT2 # 1 545 1 545 545 1067 96.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTMMKLDPYINVDPGTMSPTQHGEV FVTEDGAETDLDLGHYERFIRTKMTRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERVLAGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYM AAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRAIPANERAKIALFCNVPEKAVISMKD VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPGGEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEG KIATARYARENNIPYLGICLGMQVALIEFARNVAGMENANSTEFVPDCKYPVVALITEWR DEDGNVEVRTEKSDLGGTMRLGAQACQLSDDSVVRKLYGEPVITERHRHRYEVNNMLLKQ IEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEYQ KRQAK >gi|333596725|gb|GL892087.1| GENE 1335 1479995 - 1480786 1098 263 aa, chain - ## HITS:1 COG:ECs3641 KEGG:ns NR:ns ## COG: ECs3641 COG1694 # Protein_GI_number: 15832895 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 427 85.0 1e-120 MTQIERLLGIMKRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAISREDFDDLRGELG DLLFQVVFYAQMAQEEGRFNFDDICAAISDKLERRHPHIFGDASAGNSAEVLARWEQIKS AERAEKSQHSALDDIPLNLPALMRAHKIQKRCSAVGFDWTSLGPVLEKVHEEIDEVMHEA QQAVVDEAKLEEEMGDLLFATVNLSRHLGVKAETALQKANIKFERRFREVERIVASRGLE MSGIDLDAMEEVWQEVKRQEHDL >gi|333596725|gb|GL892087.1| GENE 1336 1480853 - 1483084 2728 743 aa, chain - ## HITS:1 COG:STM2956 KEGG:ns NR:ns ## COG: STM2956 COG0317 # Protein_GI_number: 16766262 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Salmonella typhimurium LT2 # 1 743 1 744 744 1421 92.0 0 MVAVRSAHLNKAGEFDPQKWIASLGISSQQSCERLTETWAYCLRTTQGHPDAELLLWRGV EMVEILSMLNMDIETLQAALLFPLADADVVTEDVLRESVGQSVVALIHGVRDMAAIRQLK AAQTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERVAHLREVKDAPEDERVLAAKECTN IYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVSGLRQSM KEENVRAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHF RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG TSGGGRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAG STPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLG YVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHIGISLKEAEKFLLPRYNFNELDE LLAAIGGGDIRLNQMVNFLQAQFNKPSAAEQDAAALKQLQQKTYAPQQRSKDNGRVVVEG VGNLMHHIARCCQPIPGDDIVGFITQGRGISIHRSDCDQLAELQSHAPERIVEAVWGESY SAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTREQLATIDMTIEIYNLQV LGRVLGKLNQVPDVIDARRLHGG >gi|333596725|gb|GL892087.1| GENE 1337 1483136 - 1484434 1010 432 aa, chain - ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 432 1 432 433 706 78.0 0 MAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHKGKTLFITGLLPGERADITLTEDKRQ YARGQVKRRLNDSPERVTPRCPHFGVCGGCQQQHASTELQQKSKSSALARLVGHDVNDII ADRPWGYRRRARLSLSYQPKTERLEMGFRKAGASDIVSITQCPVLVPHLEALLPDVHHCL ASLDGVRSLGHVELVQANSGPLMVLRHTAPLSKADREKLERFSHSHELALFLAPQSEILE QVTGEAPWYASDGLRLTFSPRDFIQVNDGVNQQMVANALAWLDVQPVDRVLDLFCGMGNF TLPLARKAASVVGVEGVEALVAKGQENARQNGLQNVTFFHQNLEDDVTQQPWAKQGFDKI LLDPARAGAPGVMQHIIKLAPERVVYVSCNPATLARDSEALLSGGYQIRRLAMLDMFPHT GHLESMVLFEHI >gi|333596725|gb|GL892087.1| GENE 1338 1484492 - 1487251 3371 919 aa, chain + ## HITS:1 COG:STM2958_1 KEGG:ns NR:ns ## COG: STM2958_1 COG0642 # Protein_GI_number: 16766264 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 524 1 524 525 979 94.0 0 MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGM NLQNRESIGQLISVLHRRHSEIVRAISVYDEHNRLFVTSNFHLDPTSLKIPEGTPFPRHL TVLRRGDIMILRTPIISESYSPDESAQSDAKSSNNMLGYVALELDLKSVRLQQYKEIFIS GVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGI NSMAMSLAAYHEEMQHNVDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM SHELRTPLNGVIGFTRLTLKSELNPTQRDHLHTIERSANNLLTIINDVLDFSKLEAGKLI LESIPFPLRSTLDDVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNA IKFTESGNIDILVEKRSLSNNKVQIEVQIRDTGIGIPERDQTRLFQAFRQADASISRRHG GTGLGLVITQKLVKEMGGDISFHSQPNRGSTFWFHINLDLNPNVQTDGPVTGCLKGMRLA YVEPNAAAAQCTLDVLSSTPLEVVYSPTFSALANDHYDILLLGIPVTFTGELTMQQERLA KAASMTDYLLLALPCHAQINAEELKNDGAAACLLKPLTATRLLPALTEYCRLTHQSLPLE NDEHKLPMTVMAVDDNPANLKLIGVLLEDQVQHVELCTSGAEAVEQAKQMQFDLILMDIQ MPGMDGIRACELIRQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMNDYLAKPIDEEKLHSL LLRYKPGHIGGTYTITAEAPEISVNQNATFDWQLALRQAAGKPDLARDMLQMLVDFLPEI RNKVEEQLVGENPEGLLEAIHKLHGSCGYSGVPRLKNLCQLLEQQLRAGTPESDLEPEFL ELLDEMDNVTREAMKVLGS >gi|333596725|gb|GL892087.1| GENE 1339 1487301 - 1488446 862 381 aa, chain - ## HITS:1 COG:STM2959 KEGG:ns NR:ns ## COG: STM2959 COG1929 # Protein_GI_number: 16766265 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Salmonella typhimurium LT2 # 1 379 1 379 380 536 79.0 1e-152 MKIVIAPDSYKESLSALEVATAIEVGFRDIFPSADYVKLPVADGGEGTVEAMVAATHGRL VHVPVTGPLGERVEGFFGLSGDGKSAFIEMAAASGLELVAPAKRNPLITTSWGTGELIRH ALDAGVKHIIIGIGGSATNDGGAGMVQALGVKLLDAKAQPVGPGGGELAGLAHIDLSGLD KRLADCRIEVACDVTNPLIGETGASAVFGPQKGATPEMVRTLDDALAHYAKIIARDLDIN VLNLAGGGAAGGMGAALYAFCGAQLRQGIEIVTDALHLDEQVADADLVITGEGRIDSQTI HGKVPVGVARVAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICSLEDALENAQQ NVQMAARNIAAVIKMGQGMSR >gi|333596725|gb|GL892087.1| GENE 1340 1488524 - 1489861 1816 445 aa, chain - ## HITS:1 COG:ECs3647 KEGG:ns NR:ns ## COG: ECs3647 COG4948 # Protein_GI_number: 15832901 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 2 445 3 446 446 879 93.0 0 MSTFSTPVVTSMQIIPVAGHDSMLMNLSGAHAPFFTRNIVVIKDNSGHTGVGEIPGGEKI RKTLEDAIPLVVGKTLGEYKNVLTSVRTTFADRDAGGRGLQTFDLRTTIHVVTGIEAAML DLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFIGNRKLTPLPYQSQPDEKCDWYRVRHDE AMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAEAIAALAKRFPQARVTLDPNGAWS LDEAIKIGKQLKGVLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHT LSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGN ITAIDTHWIWQEGNQRLTKQPFEIKGGMVQVPATPGLGVELDMDQVMKAHELYQKHGLGA RDDALAMQYLIPEWTFDNKRPCMVR >gi|333596725|gb|GL892087.1| GENE 1341 1489877 - 1491217 1723 446 aa, chain - ## HITS:1 COG:STM2961 KEGG:ns NR:ns ## COG: STM2961 COG4948 # Protein_GI_number: 16766267 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Salmonella typhimurium LT2 # 1 446 1 446 446 845 92.0 0 MTTQSSPIVTEMKVIPVAGQDSMLLNIGGAHNAWFTRNIVVLTDSAGNTGVGEAPGGEVI YQTLVDAIPQVVGQEVARLNKVVQRVHKGNQSADFDTFGKGAWTFELRVNAVAALEAALL DLLGKALNVPVCELLGPGKQRDAVTVLGYLFYVGDRTKTDLPYLERSPGSHEWYHLRHQE ALSGEAVVRLAEAAQDRYGFKDFKLKGGVLPGEQEIDSVRALKKRFPEARITVDPNGAWL LDEAITLCKGLGDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHA VMLNAVDIPLADPHFWTLSGAVRVAQLCDEFGLTWGCHSNNHFDISLAMFTHVGAAAPGN PTAIDTHWIWQEGEARLTKNPLEIKNGKIAVPDAPGLGVELDWDQIHKAHEAYKKLPGGA RNDAGPMQYLIPGWTFDRKRPVFGRH >gi|333596725|gb|GL892087.1| GENE 1342 1491217 - 1492572 1715 451 aa, chain - ## HITS:1 COG:ygcZ KEGG:ns NR:ns ## COG: ygcZ COG0477 # Protein_GI_number: 16130696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 447 1 447 450 791 94.0 0 MSTLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIIALFTL RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVAIFNSAQYFATVIFAPIMGWLTHEVGWS HVFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELDYIAEGGALINMDQKTQKVKVPFSQ KWAQIKQLVGTRMMIGIYLGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAIC GFVGGVLGGVISDWLMRRTGSLNIARKTPIVLGMLLSMTMVFCNYVNAEWMIIGFMAMAF FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY VGVHALVAVLSYLVLVGDIKRIELKPVVERG >gi|333596725|gb|GL892087.1| GENE 1343 1492538 - 1492774 113 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPQTTFPTPFNVVFLHGERTCHSFIYFSRHYKTASGRTKTKHKSLILITLQVLYRMNQAK AMFQECHNEYIKPRGEQR >gi|333596725|gb|GL892087.1| GENE 1344 1492907 - 1493356 610 149 aa, chain - ## HITS:1 COG:ECs3650 KEGG:ns NR:ns ## COG: ECs3650 COG0716 # Protein_GI_number: 15832904 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 148 1 148 149 257 84.0 5e-69 MAEVGIFVGTMYGNSLLVAEEAEAILVNQGHKATVYEDPELADWEKYKDKYILVVTSTTG QGDLPDSIAPLFQGIKDQLGYQPDVHYGIIALGDSSYANFCGGGKQFDALLQEQSAQRVG EMLLIDAGEHPEPESESNPWVENWATLLK >gi|333596725|gb|GL892087.1| GENE 1345 1493372 - 1494157 181 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 4 220 82 276 287 74 26 2e-11 MTLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSG VLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLTDAATLDYPLVEELDKIADKFARED KGPQPAVTDYRGMATTELPVATSKFPTTRYSLVELLPKTGRKHQLRRHLAHLRHPIIGDS KHGDLRQNRSAAAHFGCNRLMLHASELTLTHPFTGEPLMIRAGLDEVWMQALSQFGWLGQ LPENERVEFAAGNVQDEQQTQ >gi|333596725|gb|GL892087.1| GENE 1346 1494154 - 1494483 370 109 aa, chain - ## HITS:1 COG:STM2965 KEGG:ns NR:ns ## COG: STM2965 COG3098 # Protein_GI_number: 16766271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 122 58.0 2e-28 MSHHDSVRAQLHAIEALMRQHQLWQDNAPQPEAFASTQPFCLDTLAPFEWLQWVLIPRMH ALLEGGHALPASFAVSPYYEMALEATHPARAMMLVELEKLDALFAGDDA >gi|333596725|gb|GL892087.1| GENE 1347 1494874 - 1495032 56 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVSRVGILSTQIESAILPRLTTHLVSNVSQAKREIFFQKNTNPLKEKLILI >gi|333596725|gb|GL892087.1| GENE 1348 1495116 - 1495457 328 113 aa, chain - ## HITS:1 COG:no KEGG:ECL_04126 NR:ns ## KEGG: ECL_04126 # Name: not_defined # Def: SecY interacting protein Syd # Organism: E.cloacae # Pathway: not_defined # 1 113 69 181 181 197 90.0 8e-50 MDIVVQPALHAFYTTQFAGDMTACFARQPLTLLQTWSEDDLQRVQENLIGHLVTQKRLKL SPTLFIATLDSELDVISVCNLSGEVIKETLGTRNRDVLAPSLADFLTQLEPLL >gi|333596725|gb|GL892087.1| GENE 1349 1495731 - 1496573 1024 280 aa, chain + ## HITS:1 COG:ECs3654_2 KEGG:ns NR:ns ## COG: ECs3654_2 COG0780 # Protein_GI_number: 15832908 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 136 280 1 146 146 270 85.0 3e-72 MSYENHQALTGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLHADALPFVGGDIWTLYE LSWLNARGLPQVAVGHVELDYASVNLVESKSFKLYLNSFNQTKFNSWDEVQQTLERDLSA CAQGNVTVSLYRLHELEGQPIAHFHGTCIDDQDIEVESYEFSTDCLENAAGGKVVDETLV SHLLKSNCLITHQPDWGSVQIQYRGPKIDREKLLRYLVSFRHHNEFHEQCVERIFNDIQR FCQPEKLSVYARYTRRGGLDINPWRTNTDFVPATGRLVRQ >gi|333596725|gb|GL892087.1| GENE 1350 1496720 - 1498054 1793 444 aa, chain + ## HITS:1 COG:STM2969 KEGG:ns NR:ns ## COG: STM2969 COG1611 # Protein_GI_number: 16766274 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Salmonella typhimurium LT2 # 1 442 11 452 454 866 95.0 0 MDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFESFDINVLRRER GVKLEVINPPEEAFVDGRIIRSLQANLFAVLRDILFVNGQISNAGRFQHLDLESSVHITN LVFSILRNARALHVGEAPNMVVCWGGHSINETEYLYARRVGTQLGLRELNICTGCGPGAM EAPMKGAAVGHAQQRYKEGRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAH GIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFIVHTLGED ARRHYRIIIDDAAEVARQMKKAMPLVKENRRDTGDAYSFNWSIRIAPDLQIPFEPSHENM ANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKIHGDPEMMRRMDDML QGFVAQHRMKLPGSAYIPCYEIIK >gi|333596725|gb|GL892087.1| GENE 1351 1498559 - 1499848 1655 429 aa, chain + ## HITS:1 COG:STM2970 KEGG:ns NR:ns ## COG: STM2970 COG0814 # Protein_GI_number: 16766275 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 429 1 429 429 697 93.0 0 METTQTSTVASIESRSGWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGLIPLIIMAIIA FPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGVGAGKLITLLYFFAIYPILLVYSVAI TNTVESFMMHQLQMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSVLVFPFVAALMVLA LYLIPQWNGAALETLSLSSASATGNGLLLTLWLAIPVMVFSFNHSPIISSFAVAKREEYG NGAEKKCSSILARAHIMMVLTVMFFVFSCVLSLSPADLAAAKEQNISILSYLANHFNAPL IAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINRLNKITALFMLVTT WAVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHVSNVFVVVMGLIAI SAIFYSLFS >gi|333596725|gb|GL892087.1| GENE 1352 1499911 - 1501278 1473 455 aa, chain + ## HITS:1 COG:sdaB KEGG:ns NR:ns ## COG: sdaB COG1760 # Protein_GI_number: 16130704 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 455 1 455 455 866 93.0 0 MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARGILHDITRVVVDVYGSLSLTGKGH HTDIAIIMGLAGNLPDTVDIDAIPAFIQDVNTHGRLLLANGEHEVEFPVDHCMNFHADNL SLHENGMRITALAGDKAVYSQTYYSIGGGFIVDEDHFGQSSNSTVDVPYPYKNAADLQRH CHETGLSLSGLMMKNELALHSKEELEQHFANVWEVMRSGIERGITTEGVLPGKLRVPRRA AALRRMLVSTDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGA SPAQVCIAAEIGMEHNLGLTCDPVGGQVQVPCIERNAIASVKAVNAARMALRRTSEPRVC LDKVIETMYETGKDMNAKYRETSRGGLAMKIVTCD >gi|333596725|gb|GL892087.1| GENE 1353 1501391 - 1502146 666 251 aa, chain + ## HITS:1 COG:ECs3658 KEGG:ns NR:ns ## COG: ECs3658 COG0258 # Protein_GI_number: 15832912 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Escherichia coli O157:H7 # 1 251 31 281 281 442 83.0 1e-124 MAVHLLIVDALNLIRRIHAVQGTPCKDTCLHALEQLIRHSEPTHAVAVFDDEARNTGWRH QRLPDYKAGRAPMPDDLHAEMPVIRAAFEQRGVPCWGAHGNEADDLAATLAVKVAGAGHQ ATIVSTDKGYCQLLSPTIRIRDYFQKRWLDAPFIASEFGVSPEQLPDYWGLAGISSSKVP GVAGIGPKSAAQLLTEFQDLEGIYARLDEVPEKWRKKLEAHKEMAFICREVATLQTDLQL DGNLQQLRLER >gi|333596725|gb|GL892087.1| GENE 1354 1502229 - 1503329 1265 366 aa, chain - ## HITS:1 COG:ECs3666 KEGG:ns NR:ns ## COG: ECs3666 COG2933 # Protein_GI_number: 15832920 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 721 90.0 0 MNKVVLYCRPGFEKECAAEITDKAAKREVFGFARVKENAGYVVFECYQPDDADKLARELP FSSLIFARQMFVAGELLKDLPPEDRITPIVGMLQGVVEKGGDLRVEVADTNESKELMKFC RKFTVPLRAALRDAGVLTNYETPKRPVVHIFFIAPGCCYAGYSYTTNNSPFFMGIPRLRF PADAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD NGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVAALMASWLVNGWCRE TIFNLKLPMKKRYEEVSQNLAYIQQQLDEHGINAEIQARQLYHDREEVTVHIRRWWAAVG GRRDER >gi|333596725|gb|GL892087.1| GENE 1355 1503322 - 1503717 549 131 aa, chain - ## HITS:1 COG:ECs3667 KEGG:ns NR:ns ## COG: ECs3667 COG2363 # Protein_GI_number: 15832921 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 195 93.0 2e-50 MTSRFMLIFAAVSGFIFVALGAFGAHVLSKSLGVVEMGWIQTGLEYQAFHTLAIFGLAVA MQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWVLMFIGA IRLKRKGVVHE >gi|333596725|gb|GL892087.1| GENE 1356 1503757 - 1504674 687 305 aa, chain - ## HITS:1 COG:ECs3668 KEGG:ns NR:ns ## COG: ECs3668 COG0583 # Protein_GI_number: 15832922 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 587 97.0 1e-168 MSKRLPPLNALRVFDAAARHLSFTRAADELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYFQDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNSTY PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGDKAL KTPADLAQHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAASEQEKFR FRYEQ >gi|333596725|gb|GL892087.1| GENE 1357 1505025 - 1505252 296 75 aa, chain - ## HITS:1 COG:no KEGG:ECL_04135 NR:ns ## KEGG: ECL_04135 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 75 1 75 75 125 97.0 4e-28 MKKTAAIISACALTFALSACSGNNYVMHTNDGRSIVSEGKPTTDNDTGMISYKDANGNKQ QINRTDVKEMKEIEH >gi|333596725|gb|GL892087.1| GENE 1358 1505445 - 1506650 1277 401 aa, chain + ## HITS:1 COG:ECs3670 KEGG:ns NR:ns ## COG: ECs3670 COG0520 # Protein_GI_number: 15832924 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 669 83.0 0 MNAFSPAQFRAQFPALADAGIYLDSAATALKPQAVIGATRQFYSLSAGNVHRSQYADAQR LTAQYEAARDQVARLINADSGKNIVWTRGTTEAINMVAQCYARPLLQPGDEIIVSEAEHH ANLVPWLMVAEQTGARVVKLPLGADFLPDVARLPELITSRSRILALGQMSNVTGGCPDLA RAIKIAHASGVVVMVDGAQGVVHFPADVQALDIDFYAFSGHKLYGPTGIGALYGKPELLA RMTPWLGGGKMITEVTFDGFKTQDVPYRLEAGTPNVAGVIGLSAALEWLAETDVAQAESW SRGLATLAEEELKKRPGFRSFRVQDSSLLAFDFAGVHHSDMVTLLAGYGIALRAGQHCAQ PLLAAIGVSGTLRASFAPYNTKSDVDALVSAVDRALELLVD >gi|333596725|gb|GL892087.1| GENE 1359 1506650 - 1507096 474 148 aa, chain + ## HITS:1 COG:ECs3671 KEGG:ns NR:ns ## COG: ECs3671 COG2166 # Protein_GI_number: 15832925 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli O157:H7 # 1 145 1 146 147 213 77.0 7e-56 MTSSALAGHPFGTVITEETLKQTFVPLTQWEDKYRQLILLGKQLPTLSDELKSQAKEIAG CENRVWLGVSVSGEKLHFFGDSEGRIVRGLLAVLLTAVEGKSAAELLAHSPLALFDELGL RAQLSASRGQGLIALNDAVLDAARQAQA >gi|333596725|gb|GL892087.1| GENE 1360 1507087 - 1507893 965 268 aa, chain - ## HITS:1 COG:ygdL KEGG:ns NR:ns ## COG: ygdL COG1179 # Protein_GI_number: 16130719 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Escherichia coli K12 # 1 268 1 268 268 489 93.0 1e-138 MSVVISDAWRQRFGGTARLYGEKALQLFADAHVCVVGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALRDNVGLAKSEVMAERIRLINPECRVTVIDDFVTADNVAEYMSK GYSYVIDAIDSVRPKAALIAYCRRYKVPLVTTGGAGGQIDPTQIQVADLAKTIQDPLAAK LRERLKSDFNVVKNSKGKLGVDCVFSTEALVYPQADGSVCAMKSTAEGPKRMDCASGFGA ATMVTASFGFVAVSHALKKMMAKAERQA >gi|333596725|gb|GL892087.1| GENE 1361 1507969 - 1509066 1138 365 aa, chain - ## HITS:1 COG:ECs3673 KEGG:ns NR:ns ## COG: ECs3673 COG2821 # Protein_GI_number: 15832927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Escherichia coli O157:H7 # 1 365 1 365 365 688 91.0 0 MKGRWAKYLMTGAMVAILAACSSKPTDRGQQYKDGKLSQPFSLVNQPDAVGAPINAGDFS EQVYQIRNASPRLYSSQNNVYSAVQDWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTG YYTPVVQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSENYVLAYSNSLMDNFIMD VQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKREDMSMQAIREWGEKHSE AEVRELLEQNPSFVFFKPQNFAPVKGASAVPLIGRASVASDRSIIPAGTTLLAEVPLLDN NGKFNGKYELRLMVALDVGGAIKGQHFDIYQGIGPDAGHRAGWYNHYGRVWVLKAAPGTG NVFSG >gi|333596725|gb|GL892087.1| GENE 1362 1509809 - 1511005 1273 398 aa, chain - ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 398 50 447 447 706 91.0 0 MWLLSVSQVGLAATSQVVAVRVWPSSTYTRVTVESNRVLKYKQFALSNPERVVVDLEGVN LNSVLKGMAAQIRGDDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAAFKERLV MDLYPANATDIQDPLLALLEDYNKGDLDSQVPPAQSGPKPGKAGRDRPIVIMLDPGHGGE DSGAVGKYRTREKDVVLQIARRLKALIDKEGNMRAYMTRNEDVFIPLKVRVAKAQKQRAD LFVSIHADAFTSRQPSGSSVFALSTKGATSTAARYLADTQNASDLIGGVSKSGDRYVDHT MFDMVQSLTITDSLKFGKAVLGKLGRVNKLHKNSVEQAGFAVLKAPDIPSILVETAFISN VEEERKLKTAKFQQEVAESILAGIRAYFSDGETLARRG >gi|333596725|gb|GL892087.1| GENE 1363 1511290 - 1512621 1543 443 aa, chain + ## HITS:1 COG:ECs3675_1 KEGG:ns NR:ns ## COG: ECs3675_1 COG0548 # Protein_GI_number: 15832929 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 544 93.0 1e-154 MVKERRTELVQGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLV VVYGARPQIEANLAAHHHEPIYHKHTRVTDAKTLELVKQAAGLLQLDITARLSMSLNNTP LQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDNGAIVLMGPVAVSV TGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVVNDEGVIVPELFPNEAQARVEALEAQ GDYYSGTVRFLRGAVKACRSGVRRSHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRR ATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNLTIACAALYPFPEEQI GEMACVAVHPDYRSSSRGELLLERVAAQARQMGLSKLFVLTTRSIHWFQERGFTPVDIDS LPESKKEMYNYQRRSKVLMADLG >gi|333596725|gb|GL892087.1| GENE 1364 1512655 - 1514475 1798 606 aa, chain - ## HITS:1 COG:ECs3676 KEGG:ns NR:ns ## COG: ECs3676 COG0507 # Protein_GI_number: 15832930 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli O157:H7 # 1 605 1 606 608 842 73.0 0 MTMQELLLDAVEQRVLRQLDVQFAMMIAADQPAVMLAAALLSKDAGEGHVCLPLSRLVVD EKTPPVIQSCFALLGDTVDWQNVLRESSAVGPGENQAPLILTGERLYLNRLWRNELTVAR FFSETNAPLPCDEVQLRQTLDRLFGSGEATDWQKVAAAVALTRRISVISGGPGTGKTTTV AKLLAALIQLSGEQRCRIRLAAPTGKAAARLTESLGGAMQQLPLTQEQLALFPGEASTLH RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVVFLGDRDQL ASVEAGAVLGDICTYASYGYTAARAQELARLTGCSLEPDHTPVAGALRDSLCLLQKSYRF GSDSGIGQLAAAVNRGDSHATRTVFDGSFTDIEKKSLQSGEEYQAMLEEALQGYQRFLSC VQQRSQPEQVIAAFGEYQLLCALREGPFGVTGLNDRLEQLLVQKRKINRPPHSRWYEGRP VMISRNDSALGLFNGDIGIALDRGNGLRVWFQLPDGSVKSVQPSRLPEHETAWAMTVHKS QGSEFNHAALILPTQLSPVVTRELVYTAITRARQRLSLYADERVLGQAIATRTERRSGLS AIFESV >gi|333596725|gb|GL892087.1| GENE 1365 1514472 - 1518014 3116 1180 aa, chain - ## HITS:1 COG:recB KEGG:ns NR:ns ## COG: recB COG1074 # Protein_GI_number: 16130724 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Escherichia coli K12 # 1 1180 1 1180 1180 1804 78.0 0 MTHTAEPLDPLRLPLQGERLIEASAGTGKTYTIAALYLRLLLGLGGNAAFSRPLSVEELL VVTFTEAATAELRGRIRSNIHELRIACLRQTTDNPLYASLLDEIADKQQAAQWLLLAERQ MDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESELRYQACADFWRRHCYPLQRDIA EAVHALWKGPEELLRAIDRYLQGEAPVIKSPPPADETLASRHEKIVAKIAALKQKWNESV GEIDAIIENSGIDRRKFNRGNQGKWIEKISAWAEEETRGYQLPDALEKFSQRFLAERTKA DGIVPEHPLFVAIEALLAEPLSLNDLMITRAMTEIRQAVAREKRRRGELGFDDMLSRLDE ALSSENGEALASAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRQQPDTALLLIGDPKQAIY AFRGADIFTYMKARSEVVAHYTLDTNWRSAPGMVESVNALFSRMETAFMFNEIPFLPVKS APKNATLRFEVSGKVQPAMTFWLLEGEGYGVADYQAAMAQHCAAQIRDWLSAGARGEALL WKGEQANPVKASDITVLVRSRQEAALIRDALTLLDIPSVYLSNRDSVFDTLEAQEMLWLL QAVLAPERENTLRSALASSMLGLNARDIDALNHDEEAWDAVVEEFVHYRERWQKRGVMAM LRELMTRRQIAENMLASSGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNS NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANYRVQDQAFYHDRETFDAVLDL SKAETSVELAEAERLAEDLRLLYVALTRSVWHCSLGVAPVFRRRGEKTGESDFHLSALGR LIQRGEPKDAAGLRLCIESLCGDDIALHLPSLPDNSRWQMAEAPATDLNARQITRVLADD WRVTSYSGLQQHGQSIAQDLMPKLDIDAAGVGDVLAEPTLTPHQFPRGASPGTFLHGLFE ELDFTRPVSEEWVSKMLQSGGYDAHWQPVLTGWINAILQAPLSEQGFSLSQLTAKNKQVE MEFYLPVAGPLKAEALDALIRQHDPLSAGCPPLNFRQVQGMLKGFIDLVFRHDGRYYLLD YKSNWLGENSEAYTQQAMAAAMQMHRYDLQYQLYTLALHRYLRHRIADYRYDDHFGGVIY LFLRGVDAADPRSGIFSTRPDAELIDKMDNLFAANTEEMA >gi|333596725|gb|GL892087.1| GENE 1366 1518011 - 1520893 3378 960 aa, chain - ## HITS:1 COG:STM2995 KEGG:ns NR:ns ## COG: STM2995 COG1025 # Protein_GI_number: 16766297 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Salmonella typhimurium LT2 # 1 955 1 955 962 1600 83.0 0 MPGSTLFKAFVLFIALWAPVTQADSGWQSVQETIRKSEKDTRQYQAIRLDNGMTVLLVSD PQAVKSLSALVVPVGSLEDPDAHPGLAHYLEHMTLMGSKKYPQPDSLSEFLKMHGGSHNA STAPYRTAFYLEVENDALDGAVDRLADAIAAPLLDKKYADRERNAVNAELTMARTRDGMR MAQVSAETINPAHPGSRFSGGNLETLSDKPGSPVLDALHAFREKYYSANLMKAVIYSNKP LPTLANLAAQTFGRVPNKNIELPQINVPVVTDAQKGIVIHYVPALPRKVLRVEFRIDNNT AQFRSKTDELVTYLIGNRSPGTLSDWLQKQGLVEGIRADSDPVVNGNSGVLAISATLTDK GQAHRDDVVAAIFSYLSLLREKGVDKRYFDELAHVLDLDFRYPSITRDMDYVEWLADTMI RVPVEHTLDAVNIADQYDAGAVKARLAMMTPQNARVWYISPNEPHNKTAYFVDAPYQVEK ISEQTFADWQKKAGEIALTLPQLNPYIPDDFSLIKPAKAYPHPELIVDEPTLRVVYTPSR YFTDEPKADVSVVLRNPKAMDSARNQVLFALNDYLAGIALDQLSNQAAVGGISFSTNANN GLMVNANGYTQRLPQLFQALLEGYFSYTPMEEQLEQAKSWYAQMMDSAEKGKAYDQAIMP AQMLSQIPYFQREDRRALLPSITLKEVLAYRDALKTNTRPEFLVVGNMSEDQAKTLAQNV RAQLGSKGDEWCRNQDVLVEKKQNVIFEKAGSSTDSALAAVFVPVGYDEFTSSARSAVLG QIIQPWFYNQLRTEEQLGYAVFAFSMNVGRQWGLGFLLQSSDKQPAYLWQRYQAFFPQAE AKLRAMKPEEFAQIQQAVIAQVMQPPQTLGEEASQLSKDFDRGNMKFDSRDKIVAEIKQL TPQKVADFFHQAVVKPQGMAILSQVSGSQNGKTDYVKSKEWTVWKSVSALQQTLPWSKKE >gi|333596725|gb|GL892087.1| GENE 1367 1521033 - 1524407 2928 1124 aa, chain - ## HITS:1 COG:recC KEGG:ns NR:ns ## COG: recC COG1330 # Protein_GI_number: 16130726 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Escherichia coli K12 # 1 1124 1 1122 1122 1816 78.0 0 MLRVYHSNRLDVLEALMEYIVEQERLDDPFEPEMVLVQSTGMAQWLQMSLSQKFGIAANI DFPLPASFIWEMFVRVLPDIPEQSAFNKQSMAWKLMTLLPDMLAHDEFAMLRHYLNDDTD KRKLFQLASRTADLYDQYLVYRAEWLIRWEAGELVEGLPEAQIWQAPLWKALVEHTGKLG QPKWHRANLYDRFISILENSAERPARLPSRVFICGISALPPVYLNALKALGKHTDIHILF TNPCRHYWGDIQDPRWLSRLVTRQRKRLFEERAVPLFKDSENAAQLFDEEGIQNLPNPLL ASWGKLGRDYIYLLSDITSSGEGDVDAFADITPDSLLHNIQLDILDLENRAVAGITAEEF ARSDKKRKLDPDDRSIAIHVCHSPQREVEILHDRLLAMLQDDPTLTPRDIVVMVADIDSY SPFIQAVFGSATGDRYLPYAISDRRARQSHPALQAFISLLSLPDSRFISEDVLALLDVPV LAARFNINEEGLRYLRQWVNESGVRWGIDDDNVQEFELPATGQHTWQFGLTRMLLGYAME SIHGEWNDVLPYDESSGLIAELVGHLASLLMQLNRWRRALMQPRPLEEWLPVCREMLNDF FLPDSETEAAMALIEKQWQAIVDEGVNSHYHEAVPLSLLRDELTQRLDQERISQRFLAGP VNICTLMPMRSIPFKVVCLLGMNDGIYPRALPPLGFDLMSAQPKRGDRSRRDDDRYLFLE ALISAQSRLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDEACNCDESERRVKA HITCHHSRMPFDPVNYVPDELQSYAREWLPAAKKAGTPQTDFIQALEPRAMDTLTFEQLQ RFWTHPVRAFFQQRLQVNFRSEESEIPDAEPFILDGLERFKLNSQLLNALVDEEDASKLF RRYRASGLLPYGAFGEIVWDAQCEEMRALADRVIACRQPASSIEIDLDCNGVHLSGWLTH VQSDGLLRWRPSMLSVAHGLQLWLEHLVYSASGYEGESRLFVRKDGEWRFPPMEPEQALT YLSLYIEGYRQGMNKPLLVLPESGGAWIKACYDAKNDAMLTDEASLQKARSKFLQAYEGN MMVRGEGDDVWYQRLWRTLEPEYFDTITEEAQRYLLPLFKFNQS >gi|333596725|gb|GL892087.1| GENE 1368 1524420 - 1524743 171 107 aa, chain - ## HITS:1 COG:ppdC KEGG:ns NR:ns ## COG: ppdC COG4967 # Protein_GI_number: 16130727 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Escherichia coli K12 # 1 104 1 104 107 116 56.0 9e-27 MSVTLSRQKGFSMVEVLLAMMLLVMVVTALSGYHRALASRFAALSQYRQLWHHAWNQSQI STVTLPPGWQVSRGQTTQSGCVSITVTLISPMGRQSALTRLHCPVSR >gi|333596725|gb|GL892087.1| GENE 1369 1524728 - 1525108 224 126 aa, chain - ## HITS:1 COG:no KEGG:ECL_04147 NR:ns ## KEGG: ECL_04147 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 20 126 26 133 133 129 69.0 3e-29 MSSLALVLLLLVLGTLILTGLNQQLQTFSTLVSGESQSVRQQAAVQSALEWGRVQGWALQ PEVQCKQTQRLRVCVRLSGERVLLIAGNDDLLLWRGGDIAEGQIRFSAHGWSDFCPLKES ALCQLP >gi|333596725|gb|GL892087.1| GENE 1370 1525123 - 1525683 218 186 aa, chain - ## HITS:1 COG:ppdB KEGG:ns NR:ns ## COG: ppdB COG4795 # Protein_GI_number: 16130729 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Escherichia coli K12 # 1 186 1 187 187 226 58.0 2e-59 MPVNRKGFSLLEVLIAMTISSILLLSTSRFLPGLQRGVLLQSGQQTLEDEVWQRLFAIGK QLQRAGYCAGHCQGQGILIGRQGRCVIVQWDANSNGQWDSSASENDRTGFRLESGALETL RGATSCEGKGWNKLTDPDRILIEQFMVTKTDHAGFAPVVSIELRARLKGELTSPFSARHT VTGFNL >gi|333596725|gb|GL892087.1| GENE 1371 1525674 - 1526138 281 154 aa, chain - ## HITS:1 COG:ppdA KEGG:ns NR:ns ## COG: ppdA COG2165 # Protein_GI_number: 16130730 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 145 1 147 156 175 57.0 3e-44 MKNEHGFTLIETLIAISLVVILSATGLYGWDSWQQRQRLWQTACQVRDYLVFLRNDANRH NSEHKIALHNDGEKDCLVSSAASGCDSGGPFVMKPLWPGVTISDITPALGFYGLRDTAWA GHIRVQSRAGAWWVIVSNGGRIRLCNAAGEGVCQ >gi|333596725|gb|GL892087.1| GENE 1372 1526323 - 1527117 790 264 aa, chain - ## HITS:1 COG:STM3001 KEGG:ns NR:ns ## COG: STM3001 COG0207 # Protein_GI_number: 16766303 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Salmonella typhimurium LT2 # 1 264 1 264 264 553 96.0 1e-157 MKQYLELMKKVLDEGTPKNDRTGTGTLSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL WFLQGDTNVAYLHENNVSIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVMNQLK NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMEQTHLQLTREPRALPKLVIKRKPDSIF DYRFDDFEIEGYDPHPGIKAPVAI >gi|333596725|gb|GL892087.1| GENE 1373 1527124 - 1527999 1167 291 aa, chain - ## HITS:1 COG:STM3002 KEGG:ns NR:ns ## COG: STM3002 COG0682 # Protein_GI_number: 16766304 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Salmonella typhimurium LT2 # 1 291 1 291 291 509 91.0 1e-144 MNSGYLHFPEFDPVIFSIGPVALHWYGLMYLVGFVFAMWLAGRRASRPGSGWTKNEVENL LYAGFLGVFLGGRIGYVLFYNFPVFLNDPLYLFRVWDGGMSFHGGLIGVILVMVIFARRT KRNFFQVADFIAPLIPFGLGAGRLGNFINGELWGRVDPSVPFTMLFPGSRAEDIALLPSH PEWQSIFDTYGVLPRHMSQLYELALEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRI IVEFFRQPDAQFTGEWVQYISMGQILSIPMIVAGAIMMIWAYRRRPQQQLS >gi|333596725|gb|GL892087.1| GENE 1374 1528209 - 1530455 2375 748 aa, chain - ## HITS:1 COG:STM3003 KEGG:ns NR:ns ## COG: STM3003 COG3605 # Protein_GI_number: 16766305 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Salmonella typhimurium LT2 # 1 747 1 747 748 1357 93.0 0 MLTRLREIVEKVASAPRLNEALNILVTDICLAMETEVCSVYLADHDRRCYYLMATRGLKK PRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLAALFGQYRHTRIRALPASPGV AIAEGWMDATLPLMEQVYEASTLDEALERERLTAALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDARLRRELFAEVDKGSVAEWAVKKVIEKFAEQFAVLTDGYLKERAGDLRA LGQRLLFHLDDTIQGANAWPNRFVLVADELSATTLAELPQDRLAGVVVRDGAANSHAAIM VRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPVLLQEYQRLISEENELSKLAE DDVNLPAHLKSGERVKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR AMLRANAATGNLSILLPMVTSIDEIDEARRLIERAGREVEEMIGYAIPKPRIGVMLEVPS MVFMLPQLATRVDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALAMIAREAEQ HNIDLRLCGEMAGDPMCVAILIGLGFRHLSMNGRTVARVKYLLRHIEQDEARELAARSLE AQLAAEVRHQVAAFMERRGMGGLIRGGR >gi|333596725|gb|GL892087.1| GENE 1375 1530468 - 1530932 191 154 aa, chain - ## HITS:1 COG:STM3004 KEGG:ns NR:ns ## COG: STM3004 COG0494 # Protein_GI_number: 16766306 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 154 23 176 176 270 92.0 9e-73 MWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKR LVRWDTKPVCIGQKQKWFLLQLVGNDSDINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRD VYRRVMKEFASVVMQLQETPPKPQSAPAWRRKRG >gi|333596725|gb|GL892087.1| GENE 1376 1531682 - 1532374 665 230 aa, chain + ## HITS:1 COG:STM3005 KEGG:ns NR:ns ## COG: STM3005 COG3066 # Protein_GI_number: 16766307 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Salmonella typhimurium LT2 # 1 229 1 229 231 383 86.0 1e-106 MHSLAPLLSPPVSEVQLLQQAQRLAGYSLGELAVMAGLTIPNDLKRDKGWIGVLLERWLG ASAGSKPEQDFAALGVELKTIPIDSQGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV LWVPVEGDRQIPLAARRVGAPLLWSPNEEEERQLSQDWEELMDMIVLGQVERITARHGEV LQLRPKAANSKALTEAVGAKGEPILTLPRGFYLKKNFTGALLARHFLLKT >gi|333596725|gb|GL892087.1| GENE 1377 1532503 - 1532721 292 72 aa, chain + ## HITS:1 COG:no KEGG:ECL_04154 NR:ns ## KEGG: ECL_04154 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 72 1 72 72 126 91.0 2e-28 MKKWAVIISAVGLAFAVSGCSSDYVMSTKDGRMILTDGKPEVDDDTGLVSYRDREGNQMQ INRDEVSQIIER >gi|333596725|gb|GL892087.1| GENE 1378 1532581 - 1532859 105 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHSRFPFLDIQTASGTSRQRNINMAEGRQKGKEKIKKASKLLTFICLTLDDLGDFVAINL HLIAFAIAVAHQTGIVVDFGFAIGQDHTTIFR >gi|333596725|gb|GL892087.1| GENE 1379 1532854 - 1533894 1413 346 aa, chain + ## HITS:1 COG:tas KEGG:ns NR:ns ## COG: tas COG0667 # Protein_GI_number: 16130738 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 646 91.0 0 MHYHRIPHSALEISQLGLGTMTFGEQNSEADAHAQLDYAVSQGINLIDVAEMYPVPPRPE TQGLTETYVGNWLAKRGNREKLVIASKVSGPSRNNDAGIRPNQILDRKNIRAALDASLKR LQTDYLDLYQVHWPQRQTNCFGKLGYTWNESAPAVSLLETLEALTECQRAGKIRYIGVSN ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSYEVGLAEVTQYEEVELLAYSCLGFGT LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIAKRHGLDPAQMALAFVRRQP FVASTLLGATTMDQLKTNIESFHLNLSEEVLAEIEAVHQVYTYPAP >gi|333596725|gb|GL892087.1| GENE 1380 1533988 - 1535181 1613 397 aa, chain - ## HITS:1 COG:ECs3692 KEGG:ns NR:ns ## COG: ECs3692 COG0477 # Protein_GI_number: 15832946 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 396 1 396 397 575 87.0 1e-164 MRESVHTNTSIWSKGMMAVIAAQFLSAFGDNALLFATLALLKAEFYPDWSQPILQMVFVG AYIVFAPFVGQVADSFPKGRVMMFANSLKLLGAASICFGINPFVGYTLVGIGAAAYSPAK YGILGELTTGDKLVKANGLMESSTIAAILLGSVAGGVLADWHVLAALGICALMYGGAVIA NLFIPKLAVARPGQSWRFGPMTGSFFNACRVLWRNGETRFSLMGTSMFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVARCMPAGILIGVGVLFFS LQHALLPAYALLLLIGMLGGFFVVPLNALLQERGKQTVGAGNAIAVQNLGENMAMLLMLG IYSLAVKAGAPVVAIGVGFGALFALAITGLWVWQRRR >gi|333596725|gb|GL892087.1| GENE 1381 1535174 - 1537333 2460 719 aa, chain - ## HITS:1 COG:ECs3693_2 KEGG:ns NR:ns ## COG: ECs3693_2 COG0318 # Protein_GI_number: 15832947 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 196 718 1 523 524 959 87.0 0 MLFGFFRTLFRLLFRIRVTGDTQALYGERVLITPNHVSFIDGVLLALFLPVRPVFAVYSS ISEQWYMRWLRPLIDFVPLDPTKPMMIKHLVRLIGQGRPVVIFPEGRISVTGSLMKIYDG AGFVAAKSQATVVPIRIDGAELTFFSRLKGLVKQRLFPKITLHILPPTSLPMPEAPRARD RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAQYRYGAKKNCIEDINFTPDTYRKLLTK TLFVGRILEKYSKQGEKIGLMLPNAGISAAVIFGAVSRGRIPAMMNYTAGVKGLSSAITA AQINTVFTSRQFLEKGKLWHLPEQLTQVRWVFLEDLKADVTAADKLWIFAHLLMPRLAQV RQQPEDDAIILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTANDRFMSALPLFHSFG LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFFR VRYVVAGAEKLQDSTRQIWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGL DARLLAVPGIEDGGRLQLKGPNVMNGYLRVENPGVLEAPTAENVNGEVETGWYDTGDIVR FDDQGFVQIQGRAKRFAKIAGEMVSLEMVETLATAVSAEKMHATVVKSDASKGEALVLFT TDGELKRDALLRYAREHGIPELAVPRDIRYLKQLPVLGSGKPDFVTLKGMVEEAEQQNA >gi|333596725|gb|GL892087.1| GENE 1382 1537950 - 1538972 1151 340 aa, chain + ## HITS:1 COG:galR KEGG:ns NR:ns ## COG: galR COG1609 # Protein_GI_number: 16130741 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 339 1 339 343 585 88.0 1e-167 MATIKDVARLAGVSVATVSRVINNSPKASDASRQAVQDAMENLNYHPNANARALAQQSTE TIGLVVGDVSDPFFGAMVKAVEQVSYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV VHAKMIPDAELIHLMKQMPGMVIINRIIPGFETRCVALDDRYGAWLATRHLIQQGHTRIG YLCSNHPISDAEDRLQGYYDALREAGLPCNDRLVAYGEPDESGGEQAMTELLGRGRNFTA VASYNDSMAAGAMGVLNDNGIDVPAEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA ELALALAERRPPPEITHLFSPTLVRRHSVVSPAEAASEQR >gi|333596725|gb|GL892087.1| GENE 1383 1538927 - 1539403 286 158 aa, chain - ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 3 134 4 136 152 81 33.0 5e-16 MNILPLHAAPQFTQQVIDWIWEAFGEGLPRAFFQSIVEHSLTPGALPLTFIAVENDQLLG TVGLWRCDLISRQDLHPWLAALYVDEAARGNGLAGKLQEHVKGYARRAGYHELHLWSACR DFYERYGWHYIGDALEYPDKTVHLYRCSLAASAGETTE >gi|333596725|gb|GL892087.1| GENE 1384 1539400 - 1540173 811 257 aa, chain - ## HITS:1 COG:YPO1279 KEGG:ns NR:ns ## COG: YPO1279 COG2186 # Protein_GI_number: 16121564 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 13 250 23 261 266 241 53.0 1e-63 MDKAVILPEKKQYQEIGEDLRAQIIQGHYPVGSRLPPERNIAETYGVSRTIVREALLMLE LQGTVDIRQGSGVYVMRIPEEHENEEERFLNSDVGPFEILQARQLLESNIAAFAAKMATR ADIDNLRRIIEQEQRAIAADDRSQDNNKMFHLVLAGATQNQMLLATVESVWHHMDSSPLW QQFNGHIASRAWRLKWLGDRQTILAALRRRDVMGAWQAMFQHLENVKKSLLELSDEDAPD FDGYLFESVPLFQGKLV >gi|333596725|gb|GL892087.1| GENE 1385 1540252 - 1541679 1626 475 aa, chain - ## HITS:1 COG:SP2021 KEGG:ns NR:ns ## COG: SP2021 COG2723 # Protein_GI_number: 15901842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 4 472 3 469 469 375 42.0 1e-104 MSTKQIAIPQDFMLGAAASAWQTEGWSGKKPGQDSWIDLWYKNDRHVWHNGYGPAVATDF INRFREDVALMKQAGLTHYRTSINWSRFLTDYENATVDEEYAAYYDALFDEMHRQGIEPM ICLEHYELPGVLLETYGGWASKHVVELFVRYAEKVFERFHGNVTRWFTFNEPIVVQTRVY LDALRWPYEQNTSTWMQWNHHKVLATAKVVKLFREKGYNGSVGCILNPEVTYPRSRAPHD VRAAEMYDLFYNRVFLDPLVHGRYPQALFTLLAQHQVQWDYTADELALIADNTVDELGIN LYYPHRVKAPSRAWHPETPFHPAYYYEPFELPGRRMNTSRGWEIFPRIIYDMAMRIKNDY RNIDWFVAESGMGVENEAQFRNRDGVIDDTYRIDFISEHLYYTLLAREEGANCHGYMLWA FTDNISPMNAFKNRYGLIEIDLENHRARRAKKSASWFRQLRDERVLTLRVDDEWK >gi|333596725|gb|GL892087.1| GENE 1386 1541687 - 1543012 1794 441 aa, chain - ## HITS:1 COG:lin0033 KEGG:ns NR:ns ## COG: lin0033 COG1455 # Protein_GI_number: 16799112 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 2 427 6 430 452 263 34.0 6e-70 MAFQEKLIDALGSFATTFNSYRYIQAIKSAFITLMPVIIVGAFSVLISNMVLDPKNGLAS FQSLSFLAALKPITSALNYATLNFLNIGAVFLIGIELGRINGIKSLFPGLLAVICFICVT PTTVEMLVDGEMHVVKDVLLRQFSDTRSLFLGMFIAILSVEIYCWLENRKGLKIRMPDTV PPNVAASFSALIPAIITTTAIATFGFVFHQVTGMYLYDAVYQVVQQPLERVVQSLPGILL LMFVAQLFWVIGIHGNQMIKPIREPLLLGAITVNMSAFEQGKEVPNIITMPFWDVYMSIG GSGLTIGLLIAVMIATKRKEMKEIAKLSIGPGIFNINEPVIFGMPIMLNPILAIPFIITP LVTGSIGYFATVTGFAGKAVVMVPWTTPPLINAWLSTAGSMGAVITQFICIVTAVIIYLP FVKIASRRAEQAALQQATDNA >gi|333596725|gb|GL892087.1| GENE 1387 1543312 - 1544349 1118 345 aa, chain + ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 339 2 340 340 516 72.0 1e-146 MATMLDVSLRAGVSKATVSRVLNGTGQVKESTRQQVFRAMEELGYRPNFLARSLANQTSN SIGLVVSTFDGFYFGRLLQQASRQTETHGKQLIVTDGHDAPEQEEQAVQMLADRKCDAIV LYTRYMSEKTILKLINSVQTPLVIINREVSQAADRCVFFEQQDAAFKAVDYLISQGHREI ACITVPIHTPTGKARLMGYRKALEKHGIRLDERRIKYGDAGMTRGYELCKELIAEKTPFS ALFACNDDMALGASKALHQAGLKIPQDISLFGFDDAPSAKWLEPALSSVYLPIDSMIVTA IDQAIRLAKNQPVEAIPPFTGTLVLRDSVTTGPWFNQTSSNASSS >gi|333596725|gb|GL892087.1| GENE 1388 1544319 - 1545581 1515 420 aa, chain - ## HITS:1 COG:lysA KEGG:ns NR:ns ## COG: lysA COG0019 # Protein_GI_number: 16130742 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Escherichia coli K12 # 1 411 1 411 420 733 84.0 0 MPRPLNQTETDLNADNLLRLPAEFGCPVWVYDAQIVREKIAALHQFDVVRFAQKACSNIH ILRLMREQGVKVDSVSLGEIERALAAGFDPKADSDAIVFTADLIDDATLARVHELQIPVN AGSVDMLEQLGQVSPGHRVWLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQR YNLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAID TDHYYGLWSAARDSIAAHLGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDA GFNDLMRPSMYGSYHHITALAADGRDLLNAPRIETVVAGPLCESGDVFTQQEGGKVETRS LPEVKPGDYLMLHDTGAYGASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLALELV >gi|333596725|gb|GL892087.1| GENE 1389 1545703 - 1546629 1030 308 aa, chain + ## HITS:1 COG:lysR KEGG:ns NR:ns ## COG: lysR COG0583 # Protein_GI_number: 16130743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 292 1 292 311 491 89.0 1e-138 MPAVNLRHIEIFHAVMTTGNLTEAAHMLHTSQPTVSRELARFEKVLGLKLFERTRGRLHP TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIVCLPVFSQSFLPVLLQPFLARY PEVSLTIVPQESPLLEEWLSAQRHDLGLTETLVTPAGTERTELLSLDEVCVLPASHPLAH KAVLTPADFHGENYISLSQTDSYRQLLDGLFAEHQVKRRMVVETHSAASICAMVRAGVGI SVVNPLTAMDYASSGVVLRRFSVSVPFTVSLIRPLHRPASALVDAFSEHLIAHARQVALR LPDLQKPL >gi|333596725|gb|GL892087.1| GENE 1390 1546624 - 1547316 778 230 aa, chain - ## HITS:1 COG:ECs3697 KEGG:ns NR:ns ## COG: ECs3697 COG1794 # Protein_GI_number: 15832951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 378 79.0 1e-105 MKTIGLLGGMSWESTIPYYRLINEGVKQRLGGLHSASLLLHSVDFHEIEACQSGGEWDKA GQMLADAALGLERAGAQGILLCTNTMHKVASHIEDRCSLPFLHIADATGRAIRATGMTRV ALLGTRYTMEQDFYRGRLSSQFGIESLIPDEADRARINQIIFDELCLGTFSETSRAWYVS VIEKLAQQGAEGVIFGCTEIGLLVPTDQSPIPVFDTAAIHAADAVEFMLS >gi|333596725|gb|GL892087.1| GENE 1391 1547452 - 1547775 449 107 aa, chain + ## HITS:1 COG:CAC3376 KEGG:ns NR:ns ## COG: CAC3376 COG1917 # Protein_GI_number: 15896618 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Clostridium acetobutylicum # 2 107 5 110 114 131 59.0 4e-31 MFIFHKETTLEDLGNGVTRRILAHDGRMMAVEVNFEQGAIGPMHNHPHEQLTYVLSGEFE FTIGEEKHVVTAGDTLYKAPHVMHGCVCLKPGTLLDTFTPIREDFLK >gi|333596725|gb|GL892087.1| GENE 1392 1547810 - 1548946 1288 378 aa, chain - ## HITS:1 COG:STM0589 KEGG:ns NR:ns ## COG: STM0589 COG3765 # Protein_GI_number: 16763966 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Salmonella typhimurium LT2 # 1 365 1 365 378 431 58.0 1e-120 MSAMDFKKHTDLNFPHYAPPAVSAKEIDLLGLLDVLLAAKKRIITIVFAFALVGLAIAFL IPQKWTSKAVITPAEQTQWSSLRQMMVALQVLDVDVKITRADVFNLFIKKFQSQSLLEEY MKSSPYVMAQLDGAEVDPLELHRAVVNIAEKMKAIDNTQEKNADKAPYLSWTLSFTAPTA EDAQKVLNGYIQYISRIVEQETMQNIRDQLILRTKTVQQQLELDRVRLTNIHNTNLQRLN YSLEVANAAGIKKPVYSNGQAVKDDPDYSVALGADGIAQKLQIEKNLKDVSELNADFQNR EYYLAQLQKLSFEDVSLEPFKYQLSPSMPVKKDGPGKALIVLLACILGGLFACGSVLLRE AMSTRNPLPEQLPEPVTE >gi|333596725|gb|GL892087.1| GENE 1393 1549492 - 1550382 1062 296 aa, chain + ## HITS:1 COG:YPO1722 KEGG:ns NR:ns ## COG: YPO1722 COG1175 # Protein_GI_number: 16121982 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 1 295 1 295 296 478 93.0 1e-135 MNENKLLGLAWISPYIIGLILFTAFPFVSSFFLSFTDYDLMSPPVFNGIENYRYMFTEDT LFWKSMGVTFAYVFLTIPLKLAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVL WRALFAIDGLLNSFIGVFGFDPVNWLGEPSLALMSVTLLRVWQFGSAMVIFLAALQNVPQ SQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYSTY LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFAGIAFKSSKYWVFYSADKGGKNG >gi|333596725|gb|GL892087.1| GENE 1394 1550375 - 1551277 1291 300 aa, chain + ## HITS:1 COG:YPO1721 KEGG:ns NR:ns ## COG: YPO1721 COG0395 # Protein_GI_number: 16121981 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 1 300 1 306 306 505 87.0 1e-143 MADIQQLSTARSVAEREVARTLRREKINATVRYVILLVVGLLMLYPLVWMFSASFKPNHE IFTTLSLWPAHATWDGFVNGWKTGTEYTFGHYMLNTFKYVIPKVILTIISSTIVAYGFAR FEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSYMPLYLPLAFATQGFFVFML IQFLRGVPRDMEEAAQIDGCNSFQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG >gi|333596725|gb|GL892087.1| GENE 1395 1551290 - 1552417 1584 375 aa, chain + ## HITS:1 COG:YPO1720 KEGG:ns NR:ns ## COG: YPO1720 COG3839 # Protein_GI_number: 16121980 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 375 1 375 375 617 82.0 1e-176 MAEVIFNKLEKVYSNGFKAVHAIDLKIAEGEFMVIVGPSGCAKSTTLRMLAGLETISGGE VRIGDKIVNNLAPKERGIAMVFQNYALYPHMTVRENLAFGLKLSKLPKDQIESQVNEAAK ILELEELLDRLPRQLSGGQAQRVAVGRAIVKKPDVFLFDEPLSNLDAKLRASMRIRISDL HKQLKKSGKPATTVYVTHDQTEAMTMGDRICVMKLGHIMQVDTPDNLYHKPKNMFVAGFI GAPEMNIRRSVLVEKAGQLHIAIGGETMPLNAEKQEKVAAYAGQEIFYGVRPEFVSLSDQ PFPNGGCSGEMVRVENMGHEFFVYLKVADYELTARIPSDEAKPMIDKGLHRKVYFTFEMN KCHIFDAKTEQNLSL >gi|333596725|gb|GL892087.1| GENE 1396 1552431 - 1553717 1779 428 aa, chain + ## HITS:1 COG:YPO1719 KEGG:ns NR:ns ## COG: YPO1719 COG1653 # Protein_GI_number: 16121979 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 428 1 430 430 667 74.0 0 MKKVLLSAAISATLGLTALPSMAQNVDLRMSWWGGNGRHQVTLKALEEFHKQNPDINVKA EYTGWDGHLSRLTTQIAGGTEPDVMQTNWNWLPIFSKTGDGFYDLNKMKDVIDLSQFDPK ELQTTTVNGKLNGIPVSVTARVFYFNDETWKKAGIAYPKTWDELMAAGKTFESKLGKQYY PVILEHQDTLALLNSYMIQKYNIPAVDEKTKKFSYTKEQWVEFFQTYKKLIDSHVMPDTK YYASFGKSNMYEMKPWIQGEWGGTYMWNSTINKYSDNLKPPAKLELGSYPMLPGATDAGL FFKPAQMLSIGKTTKNPEAAAKLINFLLNSKEGVDTLGLERGVPLSKVAVQYLTEDGTIK EDDPSVAGLRLAQSLPAKLTVSPYFDDPQIVAQFGTSLQYIDYGQKTVEETAADFQRQAE RILRRAMR >gi|333596725|gb|GL892087.1| GENE 1397 1553802 - 1555217 1863 471 aa, chain - ## HITS:1 COG:STM3016 KEGG:ns NR:ns ## COG: STM3016 COG0477 # Protein_GI_number: 16766318 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 471 1 472 472 816 93.0 0 MTSINDSTLMPAALRDTRRMNQFVSVAAAVAGLLFGLDIGVIAGALPFITDHFTLSNRLQ EWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMVGAILFVAGSIGSAFATNVEVLLLSRVL LGVAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTYFSYSGNWRAML GVLALPAVLLIVLVIFLPNSPRWLAQKGRHVEAEEVLRMLRDTSEKAREELNEIRESLKL KQGGWSLFKANRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATL VVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLILGYCLMQFDNGTASSGLSWLS VGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDA IGAAGTFWLYTVLNVAFIGVTFWLIPETKGVTLEHIERKLMSGEKLRNIGV >gi|333596725|gb|GL892087.1| GENE 1398 1555530 - 1556291 181 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 63 248 60 238 242 74 32 2e-11 MILDAFSLQGKVAVVSGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIERVTALGRRFL SLTADLRKIDAIPELLDRAVAEFGHIDILVNNAGLIRREDAINFSETDWDDVMNLNIKSV FFMSQAAAKHFIAQGKGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLLANEWAQHN INVNAIAPGYMATNNTQQLRADEERSAAILERIPAGRWGLPSDLMGPIVFLASPASDYIN GYTVAVDGGWLAR >gi|333596725|gb|GL892087.1| GENE 1399 1556355 - 1557083 884 242 aa, chain - ## HITS:1 COG:ECs3700 KEGG:ns NR:ns ## COG: ECs3700 COG3717 # Protein_GI_number: 15832954 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Escherichia coli O157:H7 # 1 242 37 278 278 494 95.0 1e-140 MVYSHIDRIIVGGIMPVAKTVSVGGEVGKQLGVSYFLERRELGVINIGGPGTLTVDGQCY EIGHRDALYVGKGAKEVVFASVDGSKPAKFYYNCAPAHTTYPTKKVTPADVSPVTLGDNL TSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDEDACV FHMMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD LR >gi|333596725|gb|GL892087.1| GENE 1400 1557492 - 1558667 1467 391 aa, chain + ## HITS:1 COG:YPO1713 KEGG:ns NR:ns ## COG: YPO1713 COG0823 # Protein_GI_number: 16121973 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Yersinia pestis # 1 384 1 384 388 579 69.0 1e-165 MAKGMRVKLNYEVSRDPDTGVEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW NYYLLDLKNAEAVQLTEGVGDNTFGGFLSPDDKSLYYVKNDRTLLEVDLQTLAEREVYRV PEEWIGYGTWVANSDCTKLVGIEIARRDWTPLNDWKIFHDFFHKGPHCRLLRVDLKTGES TTIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKAHAEGESC THEFWVPDGSALVYVSYLKGQQGRTISRFNPDTGVNEAVMNMPACSHLMSNVDGTMLVGD GSGTPVDVKDTGGYTIDNDPYLYAFDVAKKAYFRIARHDTSWATVANSRQVTHPHPSFTP DEKAVLYSSDKDGKPALYIAKLPEQPEMLHA >gi|333596725|gb|GL892087.1| GENE 1401 1558821 - 1559504 634 227 aa, chain - ## HITS:1 COG:no KEGG:ECL_04178 NR:ns ## KEGG: ECL_04178 # Name: not_defined # Def: oligogalacturonate-specific porin # Organism: E.cloacae # Pathway: not_defined # 1 227 1 227 227 392 90.0 1e-108 MFKKSLLLASLISASFAASAVTVDLRHEYIDSGSNADRVAVSHRFDNGFGFSVEAKWKSG GDKADQPFADVVGNGHEDQISWRWKATDNIALTPAFTIESTDSRTIYKPNLHVQYSFDNG FYVAARYRYEYTRYPSSSNKDDDKVNRGDAWVGWVLGDWRTELNYVYAKSSEGVARNNNK DYSNEYNAKLAYKWDKNWAPYVEVGNVGVKDTDERQTRFRLGVAYSF >gi|333596725|gb|GL892087.1| GENE 1402 1559824 - 1561002 1297 392 aa, chain - ## HITS:1 COG:yqeF KEGG:ns NR:ns ## COG: yqeF COG0183 # Protein_GI_number: 16130748 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 392 2 392 394 639 87.0 0 MKDVVIVGALRTAIGCFQGALARHSAVDLGSVVVRALVERSGIAAHEIDEVILGQVLTAG AGQNPARQAALKGGLPNTVSAITINDVCGSGLKALHLATQAIQCGEADVVIAGGQENMSR APHVLTDSRTGAQLGNSQLLDSLVHDGLWDAFNDYHMGVTAENLAREYGISRELQDAYAL SSQQKARAAIDSGRFRDEIVPVSILRHNGEALIVDTDEQPRTDASAEGLAKLDPAFETLG SVTAGNASSINDGAAAVMMMSESKAQELALPVLARIKAFASVGVDPALMGIAPVYATRRC LERAGWQLNDVDLIEVNEAFAAQAISVGKMLEWDPLRVNVNGGAIALGHPIGASGCRILV SLVHEMKKRNARKGIATLCIGGGQGVALAIER >gi|333596725|gb|GL892087.1| GENE 1403 1561095 - 1561961 831 288 aa, chain - ## HITS:1 COG:STM3020 KEGG:ns NR:ns ## COG: STM3020 COG0583 # Protein_GI_number: 16766322 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 285 1 285 287 432 73.0 1e-121 MRYSPEALTAFVETVAAGSFSAAARRLRKSQSTISTSIANFEADLGFELFDRSARHPVLT AQGEQVLGYVQSILAASARLDELAVSLTAQTEARFTFVLSDTLNPAVLEEMMSQFDQRFP HTEFECLIGEEEDVIDLLQKERAQIGLTEARDSYPTDIGATRLPMQTRMAIYVSAGHPLA GQHETQADELHGWRELRLSTYLEREATVARGPVWSAPNYLLLLSMAVQGFGWCALPCALV DEFAASKSLVQLNVPGWPRSIAIDLVWNKRTPPGVAGSWLRQYLQDAR >gi|333596725|gb|GL892087.1| GENE 1404 1562063 - 1562527 413 154 aa, chain + ## HITS:1 COG:STM3021 KEGG:ns NR:ns ## COG: STM3021 COG4125 # Protein_GI_number: 16766323 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 148 10 157 160 229 79.0 1e-60 MQHQDALQRKLPERIFHAVCFEGIATAILAPTAAWLMQRSVVEMGGLTIILATTAMLWNI IYNFGFDRFWPVQRVKRTAKVRALHALGFECGFIVIGVTLVAAVLGVTLLQAFTLELGFF LFFLPYTMFYNWAYDALREKIIKRRQQRRALASE >gi|333596725|gb|GL892087.1| GENE 1405 1562644 - 1563873 1374 409 aa, chain + ## HITS:1 COG:ECs3702 KEGG:ns NR:ns ## COG: ECs3702 COG0814 # Protein_GI_number: 15832956 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 407 1 407 409 627 87.0 1e-180 MSKIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLLITALVAYPLTYWPHKALAQ FILSSKTKGNEGITGAVSHYYGKKIGNLITTLYFVAFFVVVLIYAVAIINSLTEQLAKRM TVDTGMRMLVSFGVVLILNLIFLMGRHITIKVMGFLVFPLIAYFLFVSLYLTGSWQPSLL TSQMAFNQHTLHQVWISIPVMVFAFSHTPIISTFAVDRREKYGEEAMGKCKKIMKVAYLI ICLSVLFFVFSCLLSIPPSYIVAAKEEGVTILSALSMMPSSPAWLGISGIIVAIIAMSKS FLGTYFGVIEGATEIVKSSLNQVGVKKSRAFNRAVSILGVSLITFAVCCINPNAISMIYA ISGPLIAMILFIMPTLSTYLIPSLKPYRSIGNLLTLIVGVLCVSVMFVG >gi|333596725|gb|GL892087.1| GENE 1406 1563907 - 1564179 425 90 aa, chain - ## HITS:1 COG:yjdJ KEGG:ns NR:ns ## COG: yjdJ COG2388 # Protein_GI_number: 16131953 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 1 90 1 90 90 151 83.0 3e-37 MDILEGHNKFYVNDAEGNQVAEIVFVPTGEHLSIIEHTDVDPSLKGQGVGKQLVAKVVEK MRGENRKIIPLCPFAKHEFDNTREYDDIRA >gi|333596725|gb|GL892087.1| GENE 1407 1564190 - 1564420 332 76 aa, chain - ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 137 80.0 5e-33 MDQELLDAGYRAYTGEKIDVYFNTGICKHSGNCVRGSAALFDLKRKPWIAPDEVDTETVI RVIDTCPSGALKYRQK >gi|333596725|gb|GL892087.1| GENE 1408 1564874 - 1565062 99 62 aa, chain + ## HITS:1 COG:ECs1655 KEGG:ns NR:ns ## COG: ECs1655 COG3729 # Protein_GI_number: 15830909 # Func_class: R General function prediction only # Function: General stress protein # Organism: Escherichia coli O157:H7 # 4 61 3 60 60 64 91.0 5e-11 MAEQHRGGSGNFAEDRDKASEAGRKGGQHSGGNFKNDPQRASEAGKKGGQNSHGGGRKSD NS >gi|333596725|gb|GL892087.1| GENE 1409 1565155 - 1565652 662 165 aa, chain + ## HITS:1 COG:STM1729 KEGG:ns NR:ns ## COG: STM1729 COG3685 # Protein_GI_number: 16765073 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 164 1 164 167 210 85.0 1e-54 MNMKSVEDVFIHLLSDTYSAEKQLTRALGKLARAASSEKLSAAFTAHLEETQGQIERIDQ IIEQESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL ATLAEQLGYKKAVKLLAETLEEEKETDLKLTDLAVGNINQKAQKG >gi|333596725|gb|GL892087.1| GENE 1410 1565715 - 1566221 587 168 aa, chain + ## HITS:1 COG:STM1730 KEGG:ns NR:ns ## COG: STM1730 COG3685 # Protein_GI_number: 16765074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 168 1 168 168 283 88.0 1e-76 MNHVEHYHDWLRDAHAMEKQAESMLESMASRIDNYPDLRARIEQHVNETKHQITVLEEIL DRNDISRSVIKDSMSKMAALGQSIGGMFPSDEIVKGSISGYVFEQFEIACYTSLLAAAQK AGDTASIPAIESILEEERQMADWLIQHIPQTTEQFLLRSDADGVEAKK >gi|333596725|gb|GL892087.1| GENE 1411 1566239 - 1567111 906 290 aa, chain + ## HITS:1 COG:STM1731 KEGG:ns NR:ns ## COG: STM1731 COG3546 # Protein_GI_number: 16765075 # Func_class: P Inorganic ion transport and metabolism # Function: Mn-containing catalase # Organism: Salmonella typhimurium LT2 # 1 289 1 289 292 483 83.0 1e-136 MFRHVKQLQYTVRVAEPNPGLANLLLEQFGGPQGELAAACRYFTQGLSDDDPGRKDMLMD IATEELSHLEIIGTLVGMLNKGAKGELAEGVENEAELYRSMTENGNDSHITSLLYGGGTP LTNSAGVPWTAAYVDTIGEPTADLRSNIAAEARAKIIYERLINVTDDPGVKDALAFLMTR EAAHQLSFEKALQSIRNNFPPGKLPPIEEYTNKYYNMSEGGEVRGSWNSDKHFDYVESPQ PAVDGGDGGASVTLTTEQATLVKAMCARTKSDPNADPLTGAELGAGKKKP >gi|333596725|gb|GL892087.1| GENE 1412 1567182 - 1568585 1565 467 aa, chain + ## HITS:1 COG:STM0360 KEGG:ns NR:ns ## COG: STM0360 COG1271 # Protein_GI_number: 16763740 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 3 466 2 465 467 762 82.0 0 MFELDAFHLARIQFAFTVSFHILFPAITIGLASYLVVLEGMWLRTKNDVWRSLYHFWLKI FAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW NKVGPGLHFFATCMVALGTLMSTFWILASNSWMHTPQGFSIQNGQVIPEDWLAIIFNPSF PYRLIHMSIAAFLCSALFVGASGAWHLLRGNDTPAIRKMFSMAMWMALLVAPIQAVVGDM HGLNTLEHQPAKIAAIEGHWENPPGEATPLLLFGVPDMEEERTKYGLEIPALGSLILTHS LDKQVPALKDFPKEDRPNSLIVFWSFRIMVGMGLMMITLGVLSVWLRYRRRLYHSRPFHW FALCMGPAGLLALLAGWVTTEVGRQPWVVYGYLRTIDAVSLHSTLQMSISLLAFIVVYCS VFGVGYVYLARLIKKGPQPVGTLTSTTSGTPARPLSAAESVPEEEKI >gi|333596725|gb|GL892087.1| GENE 1413 1568585 - 1569595 1464 336 aa, chain + ## HITS:1 COG:STM0361 KEGG:ns NR:ns ## COG: STM0361 COG1294 # Protein_GI_number: 16763741 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 336 1 336 336 441 73.0 1e-124 MGVDIPVIWFAIIVFATLMYIIMDGFDLGIGMLFSFVGDAKERDVMVNSVAPVWDGNETW LVLGGAGLFGAFPLAYAVIIDALTIPLTAMLIGLIFRGVAFEFRFKATPSHRKFWDYSFA GGSLLATFSQGIVVGAMINGFDVEGRRFVGSSLDWLTPFNLFCGLGLIVAYTLLATTWLI MKSEGALQHRMRELTRHVLLALIAVIAVVSIWTPLGWRFVAERWFTLPNFFWFLPVPVLV AVFSLWIWRLTRNPDSHARPFLLTLGLIFLGFSGLGISLWPHIIPPNITLWEASAPPASQ LFMLIGTLLIIPVILVYTAWSYYVFRGKVSDTEGYH >gi|333596725|gb|GL892087.1| GENE 1414 1569604 - 1571229 1651 541 aa, chain + ## HITS:1 COG:SMb20099 KEGG:ns NR:ns ## COG: SMb20099 COG0366 # Protein_GI_number: 16263847 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Sinorhizobium meliloti # 2 533 4 538 544 371 39.0 1e-102 MAGWHTRAIIYQIDTALFYDLNGDGCGDIAGIAAKLRYIRRMGATVIWITPFYLTPFLDE GYDVSDHLQVDPRFGKLNDIIAFIELARELGMQVIIELLIQHTSDAHPWFQQARRNPQSP YRDYYLWSDTDDDDTPPMFPGVEKSIWTWDDEAGQYYRHMFYHHEPDLNLACPAVLKEVE NIIIFWLKLGVSGFRLDAASHLTKQAGRGDEKRGLWILEHLRRLIEQRNPDAILLGEVDV EVEAYKDYFGQNDRLNLVLNFWLNKYFYVSLAEKSARPLRNAVKKMIVPPDSCCFANWLR NHDELDLAGIGKKDRQTVIDAFAPDEEMSVYQRGIRRRLAPMLNGDRKRLAFCHAVLFSL PGVPVMRYGDEIGMGDDLALEERYAVRTPMQWAGSQGGGFSDADPETYVAPMIDRGPYRY QKINVADSLLHRNSLLHCIIDIANTRSEFPEIGIAPFRLINIDSDAVLGIYYETDTRSIL TFVNFSDKPVNFTARGIRHATWTACLADKHYSDVLECGKTVALNLSGYGYRWFWTDRTAL R >gi|333596725|gb|GL892087.1| GENE 1415 1571230 - 1572216 1074 328 aa, chain - ## HITS:1 COG:alr0430 KEGG:ns NR:ns ## COG: alr0430 COG1028 # Protein_GI_number: 17227926 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 44 290 3 250 288 125 30.0 1e-28 MAVIVITGGTAGVGKATALHFAKAGYDVGIIARDEQSLRSTEEELRRFGINACAVQADVA DSKAVTDAANEIEYRLGAIDVWVNNAMGGMLAPFRTMSPEEFRRVTEVTYLGYVNGTRAA LELMTPRDRGTIIQVGSALAYRSIPLQSAYCGAKAAIRGFTDAVRTELMHENSRVQIAMV QMPGLNTPQFEWARNKFAWAMRPVPPVFQPEVAASAIFKVAQKPVRELWVGSSTVQSIVG QFLFPGFLDRLMVKKAWEGQMTDTLNADDRQDYLDQPVNDLHKIHGHFTNEAKARATSVT SGMPGKVLIGSLAVTGAIVVRLLLARRR >gi|333596725|gb|GL892087.1| GENE 1416 1572233 - 1572751 549 172 aa, chain - ## HITS:1 COG:STM1514 KEGG:ns NR:ns ## COG: STM1514 COG1546 # Protein_GI_number: 16764859 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Salmonella typhimurium LT2 # 7 156 12 161 175 152 55.0 2e-37 MSNLIHDNNSTISELTKKLATQLTDRGLRLTTAESCTGGNLAVALCAEENTAEFYDVGMV VFSDAAKERILGVLHETIERFTAVSEQTVTEMAAKICEIAEADIGVAISGYAGPEGGDDG TAAGTVCFGWNIRGKTVTRTVLFSGECQDVVDKAVRYSLSELIEILSGWDNV >gi|333596725|gb|GL892087.1| GENE 1417 1572763 - 1573209 438 148 aa, chain - ## HITS:1 COG:SMb21362 KEGG:ns NR:ns ## COG: SMb21362 COG2323 # Protein_GI_number: 16264686 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Sinorhizobium meliloti # 1 145 1 145 146 121 46.0 4e-28 MDMVFRALAIYLFLVIVFKVAGRRALLQMTSFDLILLLIISEATQQALLGEDFSVTGAMI TITTLVVVDIIFGLLKKYFSTVENILDGTPVILVENGVPLADKLKKVDVSCDDILVSARQ NHGITELKEIKYAILERNGHISIIPDEN >gi|333596725|gb|GL892087.1| GENE 1418 1573219 - 1573722 322 167 aa, chain - ## HITS:1 COG:no KEGG:ECL_02053 NR:ns ## KEGG: ECL_02053 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 167 1 167 167 260 77.0 1e-68 MEPKNEKVPGIKESYRLLTFEYAFRQVGFIVLLAIILAAIAGLFSSGLVSDEEKTNSANS LTLNYERFGRRQTESRMALTFPVTSEGKYTLSLTSETSDTYEPGSVWPQPDSMYSRGNTL FLVYDRLKQTDKFTVLLFITPSKAGKWTNSIRVNNEPDIRFWQFIYP >gi|333596725|gb|GL892087.1| GENE 1419 1573862 - 1574251 377 129 aa, chain + ## HITS:1 COG:STM1515 KEGG:ns NR:ns ## COG: STM1515 COG3111 # Protein_GI_number: 16764860 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 129 1 130 130 163 65.0 9e-41 MKLSVISALLILIIPSAWADNNGGLQKGEAPPPPHALDSGYRGTDDARIMTITQAKEMHD GASISLRGNLIDGNGDKYVFQDKTGKIEVIIPKAVFDDRTVEPDNMISISGSLDKKTSPP VVRVSHLQK >gi|333596725|gb|GL892087.1| GENE 1420 1574313 - 1575197 888 294 aa, chain + ## HITS:1 COG:AGl509 KEGG:ns NR:ns ## COG: AGl509 COG1028 # Protein_GI_number: 15890360 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 293 25 307 308 370 67.0 1e-102 MSDNEQRTNAYPTPPFPEQPQTPPGLASEMEPVPDHGEKSYKGHGRLAGKKALITGGDSG IGRAVAIAYAREGADVAINYLPEEEEDAAEVIALIKAEGRNAVALPGDVRDETFCQNLVE QAVGKLGGLDILVNNAGRQQYRESLEELTTEDFDATFKTNVYAPFWITKAALRHMKAPAS IINTSSVQAVKPSAVLLDYAQTKACLAVFTKALAKQLGPKGIRVNAVAPGPYWTVLQPSG GQPQEKVKHFGESTPLGRPGQPVEIAPLYVTLASDECSYTSGQVWCSDGGDGVI >gi|333596725|gb|GL892087.1| GENE 1421 1575300 - 1577282 1682 660 aa, chain - ## HITS:1 COG:yjcS KEGG:ns NR:ns ## COG: yjcS COG2015 # Protein_GI_number: 16131909 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Escherichia coli K12 # 7 660 13 664 665 626 47.0 1e-179 MKFKTLVSAIVVAGLVVASLVSLPVLAQKEGKGATAHTKEMNEALYGQLPFFDKTDFRNA HKGFIAPLPSEVIKGEKGVVIWDPQQYAFIKEGQKAPDTVNPSLWRQAQLNNIGGLFEVT DGVYQIRNLDLSNMTIIEGQKGITVVDPLVSAETAKAGMDLYVKHRGKRPVVAVIYTHSH VDHYGGVRGVVDDAEVTSGKVKVYAPAGFMEEAVSENIMAGNAMSRRASYIYGNLLKPNA TGQVGAGLGTTTSAGTVTLIAPTHAITKDGQKEVIDGLTYDFMLAPGSEAPSEMLWYVEE KKLIEAAENVTHTLHNIYSLRGAKIHDPLAWSKYINNAIDRWGDKAEIILAQHHWPTWGN KKVVKLMKGQRDIYRYINDQTLRLANKGLTRDEIAANFALPYGLAKSWAGRGYYGSVSNN VKATYVYYLGWFDGNPATLDELPPVEAAKKYVEYMGGASAILEKARVDYARGNYRWVAQV VSKVVFADPNNKAARELEADAFEQLGYRAESGPWRNAYLTGAQELRNGVKRMPTPNTASP DAVRAMSAEMIFDYFGVHLNGVSAANTRGVFNVDLGREGGKYKLELENGVLNHSANSQAE NPDATITLSRDTLNNIILKETTLKKAQQAGEVTIVGNAAKVNEMLRCMESFSFWFPVVTP >gi|333596725|gb|GL892087.1| GENE 1422 1577454 - 1577852 283 132 aa, chain + ## HITS:1 COG:no KEGG:ECL_04187 NR:ns ## KEGG: ECL_04187 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 18 129 18 129 132 144 71.0 1e-33 MKRLPFFFAVLTLSTLTACSSPPPDNVEKINHLQIPLVLPGEKPPQAQISHIASLYQENK QQIDNLTRSVKSQYLQDTSANEIFIADSAVQRVYASLTKLEQLDMVNQQYLKDNNVTGLQ NIHIILEPLFAS >gi|333596725|gb|GL892087.1| GENE 1423 1577911 - 1578522 623 203 aa, chain - ## HITS:1 COG:YPO1435 KEGG:ns NR:ns ## COG: YPO1435 COG2885 # Protein_GI_number: 16121713 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 1 203 1 201 353 153 43.0 2e-37 MKKTVIALIMVNAFTATSAFAAADAGTWYGGAKFGWSHYFDTNMGSKAFENTHSDHFDFD HDNVGGGVYTGYQITPWLAVEGGYDYLGNMQIKGQHGAGAQMKTQGLQMSLKASYALTND WDIYGRAGAMGYRAESDVSGHNRFETGVRPLAAVGTEYAFNKNWAGRLEYQWVSNVGNAN QIGVSSDLSSVTAGLSYRFGQYD >gi|333596725|gb|GL892087.1| GENE 1424 1578623 - 1579252 547 209 aa, chain - ## HITS:1 COG:no KEGG:ECL_04189 NR:ns ## KEGG: ECL_04189 # Name: not_defined # Def: CRP/FNR family transcriptional regulator # Organism: E.cloacae # Pathway: not_defined # 1 209 1 209 209 318 84.0 1e-85 MHILPPVRPEKSIERLTAILEPIAEKVQVVPRKRLTWLRKGKQQMYLFLEGELSLLRASD GLVVVTVYEPHLFGIAEMIQPTQGHFLRAERESTILRLDADKAAALFRAEGVWEDVAALL SYHTAYLVFRDAQVLQQRTYSVIRNHLQEMILLPEETRLRTTILEYIQDRTLLSRSSILN VLSALKQGEYITFKRGGYLLEVRHLPESF >gi|333596725|gb|GL892087.1| GENE 1425 1579316 - 1580491 951 391 aa, chain - ## HITS:1 COG:PA1288 KEGG:ns NR:ns ## COG: PA1288 COG2067 # Protein_GI_number: 15596485 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Pseudomonas aeruginosa # 2 360 7 387 424 133 28.0 7e-31 MKTRLLLCAGALAASSAHASALYFYEAGTEDTALAGAGQAARAQDASTIMTNPAGMTRLP DHMITGGLQVMDGSIDNQLDNDAHQSPGDVMKTIPNASAFYSQKINDDLYAGVGLYGNYG LGIDYGSWAGDRLIKKSTLVAMTLSPSLAYKLNDRLSIGASANVNYGYFSLTRNVNDNDY RRHDEDWAMSYRLGLLMQLTDQTRAGITWNSETNYRYTINGKVRVQHGTYDLPVSAQISA PQQIMLSLVHDINPRWSVMGDLGWQDWSQFGAPQIVVGDQQLNNVSRLKDTWHGAVGVQY RPTPQWRLNAGVAFDSSPYESQSDVALTLPTGDEWRFGTGAQYQITPASNIGFAVSYLHM QSSHVKSPAVFAGSYDHPYLWFASVNYSYQF >gi|333596725|gb|GL892087.1| GENE 1426 1580632 - 1580775 96 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATGKRRNQKESPEEELDRLLDELELTQEQREFIESMREDKGDPCEE >gi|333596725|gb|GL892087.1| GENE 1427 1581370 - 1582404 118 344 aa, chain + ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 1 59 33 92 512 72 55.0 9e-13 MACESHKVTCGKHPGYYRIYGGLDSDTIHGKRVAGTLHSRSSCPCNSRFIPSIDDTYEFS TEAEKADTAQSHVVEFPILPGPIDDPENDSFADTCKPEDNLLLNGVYLWTEITDAGHAFV SVHQDNSIYLYTYGRYGRTGPGNLTGDGILNFLQDEDARVYYRAELYRMGARAFRIDDAD PTKTRQFFEDLWNKGETAIRTLEMKETTQRRGRTIDEYDVTGNNCTTHSVEGIKFAGSTV FEHNYTLTTTQIPIESEEDFTIPVSLQRYLESKNSDFSSMTVVEMTGEFKKMYPNKDNLS RYQGSPKGYVQHIAAEAAATGDSLSQYSSGTFGGVLGGSYDVDE >gi|333596725|gb|GL892087.1| GENE 1428 1583097 - 1583738 480 213 aa, chain - ## HITS:1 COG:STM3038 KEGG:ns NR:ns ## COG: STM3038 COG0739 # Protein_GI_number: 16766339 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Salmonella typhimurium LT2 # 2 213 35 252 252 327 81.0 1e-89 MGSYSGAVYTVKRGDTLYRISRATGTSVKELARLNNISPPYTIEVGQKLKVNGGSSSGKK SSTRKTAKVTPSYQVPKSSWPPVGQRCWIWPASGKVVAPYSLSEGGNKGIDIAAARGTPV YASGAGKVVYVGNQLRGYGNLIMIKHGEDYITAYAHNDTMLVNNGQNVKAGQKIATMGST GTDTVKLHFQIRYKATAIDPQRYLPAQGSKPKC >gi|333596725|gb|GL892087.1| GENE 1429 1584001 - 1584543 461 180 aa, chain + ## HITS:1 COG:STM3039 KEGG:ns NR:ns ## COG: STM3039 COG1443 # Protein_GI_number: 16766340 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Salmonella typhimurium LT2 # 4 174 3 175 181 248 67.0 5e-66 MSIQEHVILVNDQGKVIGTQEKYAAHTSHTPLHLAFSSWLFNAHGECLITRRALSKKAWP GVWTNSVCGHPQADEATEQAIIRRCRFEVGAEITDITPIAPEFRYREADPSGIVENEICP VYAARVTNTLAINSEEVMEYQWVKLDALFRALDATPWAFSPWMVQEANAAREKLSAFAAQ >gi|333596725|gb|GL892087.1| GENE 1430 1584592 - 1586109 2224 505 aa, chain - ## HITS:1 COG:STM3040 KEGG:ns NR:ns ## COG: STM3040 COG1190 # Protein_GI_number: 16766341 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Salmonella typhimurium LT2 # 1 505 1 505 505 952 94.0 0 MSEQQAQGADAVVDLNNELKTRREKLAALREQGVPFPNDFRRDHTSDQLHADFDGKENEE LEALNVEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDLGD ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES RKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQDILGTTEVPYGEEVFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGI KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK >gi|333596725|gb|GL892087.1| GENE 1431 1586119 - 1587000 1146 293 aa, chain - ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 1 293 73 365 365 533 97.0 1e-151 MAQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI QAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWL RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQ HVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED NKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL >gi|333596725|gb|GL892087.1| GENE 1432 1587308 - 1588900 2160 530 aa, chain - ## HITS:1 COG:ECs3764 KEGG:ns NR:ns ## COG: ECs3764 COG0608 # Protein_GI_number: 15833018 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Escherichia coli O157:H7 # 1 530 48 577 577 979 89.0 0 MLPWQALSGIEKATEMLYDAFREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVAYLV PNRFEDGYGLSPEVVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGET LPAAEAIINPNLRDCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAVPNLAEYLD LVALGTVADVVPLDTNNRILTWQGLSRIRAGKCRPGIKALLEIANRDPLKLAASDLGFAL GPRLNAAGRLDDMSVGVALLLCDNIGEARVLASELDALNQTRKEIEQGMQAEALTLCEKL ERSGETLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLH MRDALERLDTLHPNLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTEWIDPALLQGEVV SDGELSPAEMTMDVAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPIGGG PLLDGIAFNVDTSIWPDNGVREVELAYKLDINEFRGNRSLQIIIDNIWPI >gi|333596725|gb|GL892087.1| GENE 1433 1589047 - 1589760 1020 237 aa, chain - ## HITS:1 COG:STM3043 KEGG:ns NR:ns ## COG: STM3043 COG1651 # Protein_GI_number: 16766344 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 1 237 1 237 237 411 85.0 1e-115 MKKSLALLTLLAASVSGFAHADDAAIKQSLTKLGVASSEIQPAPVAGMKTVLTNSGVLYV TEDGKHIIQGPMYDVSGAQPVNVTNQLLMKNLNALEKEMIVYKAAQEKHVITVFTDITCG YCHKLHEEMKDYNALGITVRYLAFPRAGVQSQPEQDMKAIWCAKDRNKAFDDAMNGKGVK PASCDIDIANHYALGVQFGVSGTPAIVLSNGYVVPGYQGPKEMKAFLDEHQKQMGGK >gi|333596725|gb|GL892087.1| GENE 1434 1589789 - 1590685 737 298 aa, chain - ## HITS:1 COG:xerD KEGG:ns NR:ns ## COG: xerD COG4974 # Protein_GI_number: 16130796 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Escherichia coli K12 # 1 298 1 298 298 509 92.0 1e-144 MEKDLALIEQFLDALWLEKNLAENTLSAYRRDLTLLVEWLAHRGLTLESAQSDDLQGLLA ERMEGGYKATSSARLLSAMRRLFQHLYREKIRADDPSALLASPKLPQRLPKDLSEAQVER LLQSPAVDLPLELRDKAMLELLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYATLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >gi|333596725|gb|GL892087.1| GENE 1435 1590787 - 1591308 896 173 aa, chain + ## HITS:1 COG:STM3045 KEGG:ns NR:ns ## COG: STM3045 COG0716 # Protein_GI_number: 16766346 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Salmonella typhimurium LT2 # 1 173 1 173 173 310 87.0 1e-84 MNIGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDAVALMEQYDVLILGIPTWDFGE IQEDWEAIWDQLDSVNFDGKIIAMYGMGDQLGYGEWFLDALGMLHDKLAPKGATFIGYWP TEGYEFTSQKPIIADGQLFVGLALDETNQYDLSDERLQTWCEQILGEMAEQFS >gi|333596725|gb|GL892087.1| GENE 1436 1591310 - 1591672 390 120 aa, chain - ## HITS:1 COG:no KEGG:ECL_04222 NR:ns ## KEGG: ECL_04222 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 120 1 121 121 168 82.0 5e-41 MSLLLHGLVAALVLLVPWPLSYTPLWLLLLSFVVFDSVRSQRRINARQGEIKLLMDSRLR WQGKEWEMTGTPWMLNTGMMLRLRRVEDNRREHLWLAADSMDPAEWRDLRRLIVQQPTQE >gi|333596725|gb|GL892087.1| GENE 1437 1591701 - 1591967 316 88 aa, chain - ## HITS:1 COG:ECs3769 KEGG:ns NR:ns ## COG: ECs3769 COG2938 # Protein_GI_number: 15833023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 157 88.0 4e-39 MDINNKARIHWACRRGMRELDISIMPFFEYEYDSLSDDDKRLFVRLLESDDPDLFNWLMN HGKPADTELQRMVQLIQTRNQERGPVAI >gi|333596725|gb|GL892087.1| GENE 1438 1592262 - 1593242 1284 326 aa, chain + ## HITS:1 COG:ECs3770 KEGG:ns NR:ns ## COG: ECs3770 COG0354 # Protein_GI_number: 15833024 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Escherichia coli O157:H7 # 1 326 1 326 326 547 84.0 1e-155 MAFTPFSPRQPAASARLPLTLITLDDWALATLTGADSEKYLQGQVTADVAQLTEHQHLLA AHCDPKGKMWSNLRLFRRQDGFAFIERRSLRDAQLKELKKYAVFSKVTITPDDEHVLLGV AGFQARAALKNLFAELPDAEKQLVSEGATSILWFEHPAERFLLVTDVATAERVTDALRGE AQLNNSQQWLALNIEAGLPVIDAANSAQFIPQATNIQALGGISFKKGCYTGQEMVARAKF RGANKRALWTLAGHASRVPEAGEDLEMKMGENWRRTGTVLAAVQLDDGRLLVQVVMNNDM EPDSVFRVRDDANTLSIEPLPYSLED >gi|333596725|gb|GL892087.1| GENE 1439 1593327 - 1593986 910 219 aa, chain - ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 218 1 218 219 332 90.0 2e-91 MVSRPLIAQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASAMAITSYSLYGGS MILLFLASTLYHAIPHQRAKIWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLSRGLMIVIW SLALLGILFKLTIAHRFKVLSLVTYLTMGWLSLIVVYQLAVKLSVGGVTLLAVGGVVYSL GVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQV >gi|333596725|gb|GL892087.1| GENE 1440 1594253 - 1594984 872 243 aa, chain + ## HITS:1 COG:YPO1253 KEGG:ns NR:ns ## COG: YPO1253 COG1737 # Protein_GI_number: 16121540 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 243 1 243 246 330 62.0 2e-90 MFSHSAIASLNNLEMMVYNYVIKNRDKVMYMTIRELADAAGVSTTTILRFCRKLNCEGYS EFRVRFKLYLEQNEPQQANFGASEIISFFKSVNNEEFDALLDKAVDIILSSERIIFVGAG TSGSLAKYGARFFSNIGKFSNHIDDPYFPVTNDMAKNALAIVLSVSGETEEILRFASQFS LHHCKVLSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLAKK LTE >gi|333596725|gb|GL892087.1| GENE 1441 1595101 - 1596534 2041 477 aa, chain + ## HITS:1 COG:bglA KEGG:ns NR:ns ## COG: bglA COG2723 # Protein_GI_number: 16130803 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 477 3 479 479 950 93.0 0 MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITQEVIEGKYYP NHEAVDFYSHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDETQPNEEGLKFYDDMFDELL KYNIEPVITLSHFEMPLYLVQEYGGWTNRKVVDFFVRFSEVVFERYKNKVKYWMTFNEIN NQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFVASALAVKAARRINPEMKVGCML AMVALYPYSCKPEDVMFAQGSMRERYVFTDVQLRGYYPSYVLNEWERRGFSIKMEAGDEQ ILREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRYSL CELYERYQKPLFIVENGFGAYDNVEEDGSINDDYRIDYLRAHVEEMMKAVTWDGVDLMGY TPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFEWYKTVIASNGETL >gi|333596725|gb|GL892087.1| GENE 1442 1596659 - 1597018 232 119 aa, chain + ## HITS:1 COG:no KEGG:KPN_03332 NR:ns ## KEGG: KPN_03332 # Name: scsA # Def: suppression of copper sensitivity: putative copper binding protein # Organism: K.pneumoniae # Pathway: not_defined # 1 119 1 119 119 148 84.0 7e-35 MIKRQRNAILLVALACLVVLICTAQRMAGMHALVMNVTAASQSVQQGQESADAPVTPCEL SAKSLMSVPPVLFEGALIAVTLLLALLAACPPRRERQWPPRVISPPRLRVHLRLCVFRE >gi|333596725|gb|GL892087.1| GENE 1443 1597067 - 1599076 2291 669 aa, chain + ## HITS:1 COG:STM1114_2 KEGG:ns NR:ns ## COG: STM1114_2 COG4232 # Protein_GI_number: 16764472 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Salmonella typhimurium LT2 # 280 668 1 342 345 446 61.0 1e-125 MFTVFRRLLVCLLWLWLPLSQAADSGWLRAADNQHASVRLRAQPESSGETRLLLDVALQK GWKTYWRSPGEGGVAPAIKWHQPVEANWRWPVPQRFDVAGITTQGYHGDVSFPITLRGDV PKILSGVLTLSTCSNVCILTDYPFSLNLTASAGAGFDYDFSRAMGTLPLSGGLTSTLNAT YAPGKLTVTAQRDAGWQAPSLFIDGMDDVDFGKPTLAVRGDSLVATVPVTDSWGEAAPNL SGKTLSLVLADSGQAQESRVDIQPGSAAPAFSLGWVLLMALAGGLILNVMPCVLPVLAMK LGTLMQTGLQARGQVRRQFLASVAGIVISFLALALMMTVLRLGNQALGWGIQFQNPWFIG AMTLVMVLFSASLLGLFEIRLPSGASTFLATRGGNGLAGHFWQGAFATLLATPCTAPFLG TAVSVALAAPLPLLWGIFLAMGIGMSLPWLLVAAWPGLARKLPRPGRWMNVVRLVLGLMM LGSSLWLLSLLTVHIGSLPVITLGVLLILALLLATAWRYRWQTALRAGAFAVVVAGAVSF VSGSGGESSRRDRIHWQPLSEQAITRALAENKRVFVDVTADWCVTCKANKYNVLLRDDVQ DALSAPDVVALRGDWSRPSDTISQFLTTRGSAAVPFNQIYGPGLPQGHVLPALLSREAVL STLSDAKGN >gi|333596725|gb|GL892087.1| GENE 1444 1599078 - 1599680 709 200 aa, chain + ## HITS:1 COG:STM1115 KEGG:ns NR:ns ## COG: STM1115 COG1651 # Protein_GI_number: 16764473 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 1 199 1 206 207 228 55.0 4e-60 MRTFIALLLLSLTTFSFAASTEGDADDQLAALLFNDPASPRTGATSPKLTIVSFTDYNCP YCKQFDPMLEKIVQENPDVQLIVKLLPFKGQSSVNAAKVALSTWQQAPDKFWALHQRLMM KKGYHDDASITAAQVKTGTDSIKTDDKTMDSLKMNLILAQVLNIQGTPATIIGDQMVAGA IPYDDLEGLVKEQLANAHGK >gi|333596725|gb|GL892087.1| GENE 1445 1599670 - 1600170 530 166 aa, chain + ## HITS:1 COG:STM1116 KEGG:ns NR:ns ## COG: STM1116 COG0526 # Protein_GI_number: 16764474 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 1 165 1 165 168 169 55.0 2e-42 MASKLPRLLCELTVWLLIGVAVSLAVDYYRQPALPQNFSATRLHTLDGETVDLAAMSEGR PLLVYVWATWCGVCRYTTPSVAALAADGGNVMSVALRSGDNAMLEKWLRKKKVTMPTVND ASGELARQWDVQVTPTLVVISHGEVKSITTGWTSSWGMRLRLWLAS >gi|333596725|gb|GL892087.1| GENE 1446 1600173 - 1600919 272 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 248 2 240 242 109 32 5e-22 RMAIALVTGASRGIGKATALQLASEGYTVAVNFHHNIKAATDVINHIVEAGGKAFAVRAD ISDEAQVMAMFDSIDREGEPLTALVNNAGILFEQSTIENLSAERINRVLTTNVTGYFLCC REAVKRMSHKHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDSLTTGLALEVAAQGI RVNCVRPGLIYTDIHASGGEPGRVDRVKSMLPMQRGGQPEEVAQAITWLLSDKASYVTGS FLELAGGK >gi|333596725|gb|GL892087.1| GENE 1447 1600987 - 1603860 3761 957 aa, chain - ## HITS:1 COG:ECs3774_2 KEGG:ns NR:ns ## COG: ECs3774_2 COG1003 # Protein_GI_number: 15833028 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Escherichia coli O157:H7 # 451 957 1 507 507 967 93.0 0 MTQTLSQLENRGAFIERHIGPDAQQQQEMLKTVGADSLNALIGQIVPKDIQLATPPQVGD STTEFAALAELKAIAGLNKRYKSYIGMGYTNVQLPPVILRNMLENPGWYTAYTPYQPEVS QGRLEALLNFQQVTLDLTGMDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVH PQTLDVVRTRAETFGFEVIVDDADKVLDHQDVFGVLLQQVGTTGEVHDYSALIAELKSRK VIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFGAKDEFKRSMPGR IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRI ASRIHRLADILACGLQQKGLKLRHAHYFDTLCVEVADKAAVLARAEAAQINLRSDIHNAV GITLDESTTRDDILTLFSVLLGDAHGLDVDTLDKEVALDSRSIQESMLRDDAILTHPVFN RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFSELHPFCPAE QAEGYHMMINQLSEWLVKLTGYDALCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI PSSAHGTNPASAQMAGMEVVVVACDKNGNIDLADLRAKAEQAGDKLSCIMVTYPSTHGVY EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQ ASQVAILNANYIATRLKDAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDY GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRSEIDRVKGGEWALEDNPLVNA PHTQNELVAEWNHGYTRELAVFPAGVANKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ >gi|333596725|gb|GL892087.1| GENE 1448 1603988 - 1604377 661 129 aa, chain - ## HITS:1 COG:STM3054 KEGG:ns NR:ns ## COG: STM3054 COG0509 # Protein_GI_number: 16766355 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Salmonella typhimurium LT2 # 1 129 1 129 129 211 95.0 2e-55 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV AESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYEGGWIFKIKASDEAQVAALLDAT AYEALLEDE >gi|333596725|gb|GL892087.1| GENE 1449 1604401 - 1605495 1338 364 aa, chain - ## HITS:1 COG:STM3055 KEGG:ns NR:ns ## COG: STM3055 COG0404 # Protein_GI_number: 16766356 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Salmonella typhimurium LT2 # 1 364 1 364 364 693 92.0 0 MAQQTPLYEQHVLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGS RTREFLRYLLANDVAKLKTPGKALYTGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREK DLSWISQHAEPYAIDITVRDDLSLIAVQGPNAQAKAASLFSDEQRNATEGMKPFFGVQAG DLFIATTGYTGEAGYEIAMPNEKAADFWRALVEAGVKPAGLGARDTLRLEAGMNLYGQEM DEGVSPLAANMGWTIAWEPADRDFIGREALEMQREKGTEQLVGLVMKEKGVLRGELPVRF TDADGNHREGVITSGTFSPTLGYSIALARVPAGIGETAVVQIRNREMPVNVTKPIFVRAG KPVA >gi|333596725|gb|GL892087.1| GENE 1450 1605893 - 1607059 1469 388 aa, chain - ## HITS:1 COG:STM3056 KEGG:ns NR:ns ## COG: STM3056 COG0654 # Protein_GI_number: 16766357 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 388 13 400 400 683 85.0 0 MVGLALACGLQGSGLRVAVLEQNAPQPVAQDAPPALRVSAINAASEKLLTHLGVWSEIVA QRASCYHGMEVWDKDSFGHIAFDDESMGYSHLGHIVENAVIHHALWRKAQQGSDITLIAP AKLQQVAWGENDAFITLESGDMLTARLVVGADGANSWLRNKADIPLTFWDYRHHALVATI RTEEPHGGVARQIFHNDGILAFLPLADPHLCSIVWSLEPEKAQQMQEATPNAFSQALCVA FDNRLGLCSLESERQTFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAEL VEELRRLHREGKDIGQHLYLRRYERSRKHSAAMMLASMQGFRELFAGANPAKKLLRDIGL KLADTLPGVKPQLLRQAMGLNDLPDWLR >gi|333596725|gb|GL892087.1| GENE 1451 1607108 - 1608286 914 392 aa, chain - ## HITS:1 COG:ubiH KEGG:ns NR:ns ## COG: ubiH COG0654 # Protein_GI_number: 16130809 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 392 1 392 392 573 74.0 1e-163 MSVIIVGGGMTGATLALAISQLTQGQLPVHLVEAIAPLTTDHPGFDARAIALAQGTCQQL ARIGIWQAIADCATAIDTVHVSDRGHAGFVTLDAHDYRIRALGQVVELHDVGLRLFRLLQ DAPGVTLHCPARVASFSRRDEAVSVTLDNGTTLEGQLLVAADGSRSTIATQCGVEWRSES YGQVAVIANVSTAGAHNGRAFERFTEHGPLAMLPMSNGRCSLVWCHAQDRADEVLSWSDE RFCSGLQKAFGWRLGRITHAGKRVAYPLALTTASQTVSHRVALVGNAAQTLHPIAGQGFN LGLRDVMSLAELLAQTWREQQDCGAYSVLSHYQKRRQADKAATIGVTDGLVHLFANRWAP LVAGRNLGLMAMELFIPARDVLAQRTLGWVAR >gi|333596725|gb|GL892087.1| GENE 1452 1608283 - 1609602 1583 439 aa, chain - ## HITS:1 COG:STM3058 KEGG:ns NR:ns ## COG: STM3058 COG0006 # Protein_GI_number: 16766359 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Salmonella typhimurium LT2 # 3 438 1 436 438 827 90.0 0 MVISSQEYSRRRQALLAKMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEA VLVLIKSNDTHNHSVIFNRVRDLTAEIWFGRRLGQEAAPEKLGVDRALAFSEINQQLYQL LNGLDVLYHAQGEYAYADEIVFTALDKLRKGSRQNLSAPATLTDWRPVVHEMRLFKSEEE LNVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARFPSYNTIVGGGENGC ILHYTENECELRDGDLVLIDAGCEYQGYAGDITRTFPVNGKFTPAQREIYDIVLASLETA LTLFRPGTSIQEVTGEVVRIMITGLVKLGILKGDVDTLIAENAHRPYFMHGLSHWLGLDV HDVGAYGPERSRVLEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITETGNENLT ATVVKKADDIEALMAAARV >gi|333596725|gb|GL892087.1| GENE 1453 1609628 - 1610212 787 194 aa, chain - ## HITS:1 COG:STM3059 KEGG:ns NR:ns ## COG: STM3059 COG3079 # Protein_GI_number: 16766360 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 194 1 194 194 357 90.0 1e-98 MRMSIQNEMPGYKDLNQLLNQQGVGLTPAEMHGLISGILCGGNSDSSWQPLIHDLTNEGL AFGHELAEALRKMHAATSDSLEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHYLLGLGV TQPKLDKVTGEAGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDNFTR SQPTAPEVRKPTLH >gi|333596725|gb|GL892087.1| GENE 1454 1610374 - 1610703 133 109 aa, chain + ## HITS:1 COG:STM3060 KEGG:ns NR:ns ## COG: STM3060 COG3027 # Protein_GI_number: 16766361 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 159 90.0 1e-39 MSAQPVDLQIFGRSLRVNCPPEQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN ISYELTQEKAKTRDYAASMEQRIKMLQQTIEQALLDQGRNPERPGPKFE >gi|333596725|gb|GL892087.1| GENE 1455 1610953 - 1611549 580 198 aa, chain + ## HITS:1 COG:ECs3782 KEGG:ns NR:ns ## COG: ECs3782 COG0212 # Protein_GI_number: 15833036 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Escherichia coli O157:H7 # 17 198 1 182 182 306 83.0 2e-83 MTQFPEVSASRQDIRQLIRQRRRALSAEQQAHFAQQAAARMMAYPPVVMANTVALFLSFD GELDTQPLIDQLWRAGKKVYLPVLHPFSPGNLLFLHYHPHSELVVNRLKITEPKLDVRDV LPLSELDVLITPLVAFDEQGQRLGMGGGFYDRTLQNWQQYGLQPVGYAHDCQAVEALPVE KWDVPLPAVVTPGKIWLW >gi|333596725|gb|GL892087.1| GENE 1456 1611703 - 1612935 1687 410 aa, chain - ## HITS:1 COG:ECs3784 KEGG:ns NR:ns ## COG: ECs3784 COG0111 # Protein_GI_number: 15833038 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 753 92.0 0 MAKVSLEKDKIKFLLVEGVHQKAIDSLRAAGYTNIEFHKGALDTEELKASIRDAHFIGLR SRTQLTEDVIAAAEKLVAIGCFCIGTNQVDLNAAAKRGIPVFNAPFSNTRSVAELVIGEL LLLLRGIPEANAKAHRGVWNKLAAGSYEARGKKLGIIGYGHIGTQLGILAESLGMHVFFY DIESKLPLGNATQVQHLSDLLNMSDVVSLHVPENASTKNMMGAEELALMKPGSLLINAAR GTVVDIPALCDALKRKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVILTPHIGGSTQEA QENIGLEVAGKLSKYSDNGSTLSAVNFPEVSLPLHGGRRLLHIHENRPGVLTAINQIFAE QSVNIAAQYLQTNSQMGYVVIDIEADEDIAEKALQSMKAIPGTIRARLLY >gi|333596725|gb|GL892087.1| GENE 1457 1613202 - 1613861 813 219 aa, chain - ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 376 94.0 1e-104 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGITVFDLNEVDRLGIYVDGADEINGHMQMIKGGGAALTREKIIASVADKFICIADAS KQVEILGNFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGLEILDAV ALENAINGIPGVVTVGLFANRGADVALIGTADGVKTIVK >gi|333596725|gb|GL892087.1| GENE 1458 1613989 - 1614882 1181 297 aa, chain + ## HITS:1 COG:ECs3786 KEGG:ns NR:ns ## COG: ECs3786 COG0583 # Protein_GI_number: 15833040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 552 95.0 1e-157 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT EQGQKLLALLRQVELLEDEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR LNLQVEDETRTQERLRRGEVVGAVSIQPQALPSCLVDQLGALDYLFVGSKAFAERYFPNG VTRAALLKAPAVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI PHLQIEKELKSGELIDLTPGLYQRRMLYWHRFAPESRMMRNVTDALLAFGHKVLRQD >gi|333596725|gb|GL892087.1| GENE 1459 1614926 - 1615633 865 235 aa, chain - ## HITS:1 COG:STM3065 KEGG:ns NR:ns ## COG: STM3065 COG2968 # Protein_GI_number: 16766366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 229 6 235 248 345 91.0 6e-95 MALAALVSLGAVSVQANELPNGPHIVTSGTASVDAVPDVATLAIEVNVAAKDAASAKKQA DDRVAQYLSFLEQNGVAKKDISSANLRTQPDYDYQNGKSILKGYRAVRTVEVTLRQLDKL NSLLDGALKAGLNEIRSVSLGVAQPEKYKDEARKAAIDDAIHQAQQLASGFKSKLGPVYS VRYHVSNYQPSPMVRMMKADAAPVSAQETYEQPTIQFDDQVDVVFQLEPTEKPAQ >gi|333596725|gb|GL892087.1| GENE 1460 1615741 - 1616376 834 211 aa, chain - ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 338 89.0 6e-93 MLSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHLMIALLCAVSDLLLICAGIFGGSA LLMQSPWLLALVTWGGVAFLLWYGFGALKTAMSSNLELASAEVMKQGRWKIIVTMLAVTW LNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTVSASFLWFFGLAILAAWLAPRLRTAKAQ RIINTLVGLVMWFIAFQLAKEGIHHVQGLLN >gi|333596725|gb|GL892087.1| GENE 1461 1616520 - 1617374 1129 284 aa, chain - ## HITS:1 COG:ECs3795 KEGG:ns NR:ns ## COG: ECs3795 COG0668 # Protein_GI_number: 15833049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 282 1 282 286 434 85.0 1e-121 MEQLDVVDSINHAGNWLVRNQALLLSYAVNIVAAIAIIIVGMIVARIVSNAVNRVMVARH IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAIGLALQGSLSNLAA GVLLVTFRPFRSGEYVDLGGIAGTVLQVQIFSTTLRTVDGRIVVVPNGKIIAGNIINFSR EPVRRNELIVSVAYDSDIDQVKSLIANIIASDDRILKDREQTIRLNELGASSINFVVRIW SKSSDLQNVYWDVLERIKRDFDANGISFPYPQMDVNVKKVKEAE >gi|333596725|gb|GL892087.1| GENE 1462 1617563 - 1618642 1155 359 aa, chain - ## HITS:1 COG:Zfba KEGG:ns NR:ns ## COG: Zfba COG0191 # Protein_GI_number: 15803459 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 1 359 26 384 384 720 95.0 0 MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQ FSNGGAAFIAGKGVKTDIPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWI DGLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSKYLARMSKMGMTLEIELGCTG GEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPT ILRDSQEYVSKKHNLPHNSLNFVFHGGSGSSAQEIKDSVSYGVVKMNIDTDTQWATWDGI LQYYKTNEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAAQTSMVTRLEQAFKELNAIDVL >gi|333596725|gb|GL892087.1| GENE 1463 1618735 - 1619898 1448 387 aa, chain - ## HITS:1 COG:STM3069 KEGG:ns NR:ns ## COG: STM3069 COG0126 # Protein_GI_number: 16766370 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Salmonella typhimurium LT2 # 1 387 1 387 387 693 96.0 0 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHL GRPTEGEYNEEFSLLPVVNYLKDKLSSPVRLVKDYLDGVEVAEGELVVLENVRFNKGEKK DDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLADELEALGKALKE PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLVD EAKRLLGTCDIPVPTDVRVATEFSETATATLKSVNDIKDEEQILDLGDVSAQKLAEILKN AKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKVLPAVAMLEERAKK >gi|333596725|gb|GL892087.1| GENE 1464 1619948 - 1620967 1008 339 aa, chain - ## HITS:1 COG:ECs3798 KEGG:ns NR:ns ## COG: ECs3798 COG0057 # Protein_GI_number: 15833052 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 647 94.0 0 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWD VRQEREQLFVGDDAIRVLHENSIEGLPWRELGVDVVLDCTGVYGNREHGEAHLNAGAKKV LFSHPGSHDLDATVVFGVNQHELKAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTI NVTAIDLSVTVKKPVKACEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAAKGFR >gi|333596725|gb|GL892087.1| GENE 1465 1621334 - 1623325 2420 663 aa, chain - ## HITS:1 COG:STM3076 KEGG:ns NR:ns ## COG: STM3076 COG0021 # Protein_GI_number: 16766377 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Salmonella typhimurium LT2 # 1 663 1 663 663 1281 94.0 0 MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLNHNPQNPAWADRDRF VLSNGHGSMLIYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEVDYTAGVETTTGPLGQGI ANAVGMAIAEKTLAAQFNRPGHDIVDHFTYAFLGDGCMMEGISHEVCSLAGTLKLGKLVA FYDDNGISIDGHVEGWFTDDTAARFEAYGWHVVRGVDGHDADSIKRAVEEARAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREALGWKHPAFEIPSEIYAQWDAKEVG QAKEAAWNEKFAAYAKAFPQEAAEFTRRMKGDMPSDFDAKANEFIAKLQANPSKIASRKA SQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKPINEDAAGNYIHYGVREFGMTAIANG IALHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTPEQLANIARGG YVLKDCAGQPELIFIATGSEVELAVAAWEKLTAEGVKARVVSMPSTDAFDKQDAAYRESV LPKAVSARVAVEAGIADYWFKYVGLNGAIVGMTTFGESAPAEQLFEEFGFTVENVLAKAK ELL >gi|333596725|gb|GL892087.1| GENE 1466 1623598 - 1624356 986 252 aa, chain + ## HITS:1 COG:ECs3811 KEGG:ns NR:ns ## COG: ECs3811 COG0501 # Protein_GI_number: 15833065 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 252 43 294 294 418 86.0 1e-117 MKMRAIGLAVGTTLLLSGCQNMDSNGLMTSGAEAFQAYSLSDAQVIALSDQACKDMDGKA TLAPANSTYTQRLNKIASALGDNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRAAAASAGGIVGSLSQSQLGDVGEKLV NSQFSQRQESEADDYSYDLLRKRGINPSGLATSFEKLAKLEEGRQSSMFDDHPASVERAQ HIRDRMAADGIK >gi|333596725|gb|GL892087.1| GENE 1467 1624402 - 1626042 1832 546 aa, chain - ## HITS:1 COG:PA3506 KEGG:ns NR:ns ## COG: PA3506 COG0028 # Protein_GI_number: 15598702 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Pseudomonas aeruginosa # 2 541 4 549 560 420 48.0 1e-117 MSEMITVGDAIARTLEQYQVEAIYGVISIHNLPIADAVGQRGTIRFVPARGEAGSVTMAD AHGRFSGLGVALTSTGAGAGNAVGALVEAMNACTPLLHLTGQVEKAWLDADTGFIHETRD QLTFLKASSKRAYRISNANQAIAILHKAIQDAQTPPCGPVSVEIPIDIQGAKIPLSLVTK PVKPASVAAVDPATVDALWAQLKQAKQPLLWLGGGALGSAGAVKTLADAGVTVISSTHAR GVLPDDHRASLRAFHNSPSVEALMAQCDFTLVAGSRLRSNETRSWTLELPSPRVQIDIDP AAASRNYLMDSTLIADCSALLGALAEKAQGREWGNAQWDAQVQQAVGQAEQGLREQCGVY AKLNDAIEKALPKDGLLVRDITVSGSLWGSRLLRANGPLMNIHSLAGAIGMGLPMAIGTA IANPQRKVVGLVGDGGLSLNLGELATLAQEKANVTLLIMNDGGYGVMRGIQDKYFGGRQY YNALHTPDFTLLAQAIGLQAWSVERAEDFDAVMTEALAMPGPSVVEVRMGQIGALKFAGP PQKTLY >gi|333596725|gb|GL892087.1| GENE 1468 1626056 - 1627525 1702 489 aa, chain - ## HITS:1 COG:PA3504 KEGG:ns NR:ns ## COG: PA3504 COG1012 # Protein_GI_number: 15598700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 6 477 10 480 494 533 60.0 1e-151 MDNLKIFIGGQWRHGGGNPMQSHFPADGTINATLNAASLDDLEEAIAAGARAWREPAWRN SLPHMRAKILHKVADLIESRVDVLAQMQSRDNGKPLAEARGLVMSAAGTARYFAAACELL EGELPTPRQADLLTLSRYEPLGVVAAITPWNSPIASEMQKVAPAIAAGNAVILKPAEATP LMALELARIFEQAGLPAGLLSVLPGKGSVIGDALVRHPEVRKISFTGGTTTGRHLAHVAA EKLIPASLELGGKSPTIVMEDADIEQAARGICYGIFSSAGQACIAGSRLFIHESLYAPLM ARLLELTRGLRVGHPFTDGVHVGPLINEKHRQSVIEYVELAKREGGRVLCGGEIPADPAL ANGSFFQPTIIEGLTNRARACQEEIFGPVLVAMPFRDEATLIREANDSVYGLAAGIWTRD TGRALRLSEQLEAGTVWINTYKVFAISTPFGGLKESGLGREKGIQGLKAWMQQKSIYLAT GNSVNHWCD >gi|333596725|gb|GL892087.1| GENE 1469 1627535 - 1628305 975 256 aa, chain - ## HITS:1 COG:PA3505 KEGG:ns NR:ns ## COG: PA3505 COG1712 # Protein_GI_number: 15598701 # Func_class: R General function prediction only # Function: Predicted dinucleotide-utilizing enzyme # Organism: Pseudomonas aeruginosa # 1 249 1 257 267 172 42.0 7e-43 MKKVMLIGFGAMAQAVIERLPAGVAIGWIVARDSHHAAIHDQFGDAVEALTSPTACAQTP DLVLECASQQAVAQYGEEILRRGWHLAVISTGALADSALEQRLLAAGGKLTLLSGAVAGI DGLAAAKEGGLERVTYQSRKSPASWRGSYAEQLIDLNLVSEAKVFFEGSAREAARLFPAN ANVAATVALGGVGMDETRVQLMVDPATKRNTHTLHVEGLFGEFHLELSGLPLASNPKTST LAALSAVRACRELALS >gi|333596725|gb|GL892087.1| GENE 1470 1628315 - 1629109 1055 264 aa, chain - ## HITS:1 COG:PA3507 KEGG:ns NR:ns ## COG: PA3507 COG1028 # Protein_GI_number: 15598703 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 9 263 10 264 265 268 56.0 7e-72 MNAQIDGRVAVVTGGSSGIGFETLRLLLGDGAKVAFCGRDPDRLASAHATLQNEFPHGEI FSYRCDVLNADDVQAFADAVQARFGAADMLINNAGQGYVAHFQDTPREAWLHEAELKLFG VINPVQAFQPLLEQSDIASVTCVNSLLALQPEEHMIATSAARAALLNMTLTLSKELVGKG IRVNSILLGMVESGQWQRRFETRADKNQSWPEWTADIARKRGIPMARLGKPQEPAQALLF LASPLASFTTGAALDVSGGFCRHL >gi|333596725|gb|GL892087.1| GENE 1471 1629093 - 1629863 951 256 aa, chain - ## HITS:1 COG:PA3509 KEGG:ns NR:ns ## COG: PA3509 COG0596 # Protein_GI_number: 15598705 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 5 234 33 266 289 140 43.0 3e-33 MTGFREQGSGIPLMLLHGISSGAASWHKQMVLNGFRVLAWDMPGYGESPMLAVERANAGD YADALAAMLDRAGVWQAVLVGHSLGALVASAFAAKFPERVIHLVLADAAQGYGQAAPEQR EQVWRNREQQMALGGEILAQTRAAKLLRPGARAEDIATVAAGMRALRSEGYLAAAWMLAH DDIHGWLKRYSGTFEVWCGEQDAITQPELVQGLALRYGMPFTAIPQAGHASYLDNDAFFN QQLLRINEEVRDECTN >gi|333596725|gb|GL892087.1| GENE 1472 1629874 - 1630404 738 176 aa, chain - ## HITS:1 COG:no KEGG:ECL_04257 NR:ns ## KEGG: ECL_04257 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 176 1 176 176 355 96.0 3e-97 MTDSTVTHKTGIKPDHLTMEEWVESRIARFEGRKYDWNALKFQADFDPKYRRAQMRYIGT GATGVANDTNTVQADHFTFSTMVLPSKCEGPLHLHDDVEEVFFMLKGQITLMIQDGDCYT ETVLRERDLISVPPGIYRGLFNHGEEEALMCVMLGTNKPEIPTYPSDHPLSKVKRN >gi|333596725|gb|GL892087.1| GENE 1473 1630415 - 1631671 1557 418 aa, chain - ## HITS:1 COG:STM3832 KEGG:ns NR:ns ## COG: STM3832 COG0477 # Protein_GI_number: 16767117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 21 414 8 415 420 163 26.0 7e-40 MTTLETNTAPVEASGEGTCTPEKAVRWAIPLSLLACVLLAFFDKISIAALFSDTHFQQAM GIDFDTTRLGILMSAFLLSYGFSSVFLSGLGDKIAPLRLLTGMMVVWCVLMVAMGFTHNY TLMIVLRILLGVAEGPLFPLAFAIVRHNFPQHLQARATMLWLLGTPVGAAIGFPLSLWLL NTFGWQSTFFVMAMLTVPVLIFVRIGLRGIRLEAKPGTSQASQDERRAARRELFVSPHFW IICIFNIAFLTYLWGINGWLPGYLIKGKGIHLEHAGWLSSMPFIAMLAGEVIGAWLSDRV DKRAAACFISMAGAAVGLAAVMHLDTPLAIIAAMSFSTFMWGTGAPNIFALLAKATHPRV SATAGGIFNGLGNFAGALSPAVMGALIAFTHSMDSGLIFLAVMAAVGCVLLLPLLRRY >gi|333596725|gb|GL892087.1| GENE 1474 1631697 - 1632884 1281 395 aa, chain - ## HITS:1 COG:mlr5000 KEGG:ns NR:ns ## COG: mlr5000 COG0446 # Protein_GI_number: 13474174 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Mesorhizobium loti # 1 385 4 398 412 201 36.0 2e-51 MTSRIVIIGGGQAGGWAAKTLRDEGFDGEICVVAEEEWDFYERPQLSKASLLEPDAGLPR LFSDEAQQALNLTWYRPLRAEAVDRDEKKVVLSNGEQLSYNILLIATGGRARLPSQAWAS HPQVYTLRHWQDAQRLKARLAESQKLAIVGGGWIGLEIAASARKSGVAVTLFEQQPALCM RSVSGEVSKRLEAIHREQGVEIRTGCGALELEDDNGLPVIHCDGNRETFDAVVVGIGVDL NLELARDAGLKTGRGIVVDAQGHTSDPFIFAAGDVAQHHHYGLCIQSWAFAQNQAVATAK AMLNPDAPGYDDAPWLWSDQYQHNIQILGIPQPGGKTLVREDSLFFSLDENGRLTQLVAF NDARTVKLAKRWMAAGRDLSDVPLADPTFSLMSLR >gi|333596725|gb|GL892087.1| GENE 1475 1632881 - 1633807 1282 308 aa, chain - ## HITS:1 COG:PA3503 KEGG:ns NR:ns ## COG: PA3503 COG0346 # Protein_GI_number: 15598699 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pseudomonas aeruginosa # 108 302 1 195 211 241 55.0 2e-63 MSVTGIEKLEFGVEDLTHCAKFMRDFGLTGDASGQRFTTLSGARVELNPIDSPDLPPAFE AGNTMRRMTWAVAAQSDLDALRPKLAQQPGFREVGDALECLDPNGMTLRVQVSQQTEVEL NVEPINQWGDARRIDTPSPVYDRAQPINVGHVVFFVEELAAVEKFYREVLGFQVSDRYIN RAVFLRCGARGGHHNLFLLQLPNRKRGLNHVAFTVRDIHEVIGGGIAMNKHDWSTFIGPG RHPVSSAYFWYVNSPTGGAFEYYTNDDYLTENWQPRELEHSLVSFTEWAVEGGIDHDTRR QQKKPEAV >gi|333596725|gb|GL892087.1| GENE 1476 1633886 - 1634677 949 263 aa, chain - ## HITS:1 COG:PA3508 KEGG:ns NR:ns ## COG: PA3508 COG1414 # Protein_GI_number: 15598704 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 258 4 257 277 211 44.0 8e-55 MMANDQEVKYLVPGLERGLQLLLAFGEQHRDLTFAELHRLVDMPKATAYRVVQTLEYMGF LERNTRTNTFSLGMNVLRLGFEYIASLDVAQVGQPVIEQLRDVSQCSSHLAIRDGRDIIY IARVSAAGSRINQVSIGTRLPVHCTSLGRMLLTDISHADFEQLFPHERLPGNTPGQLHDR EALWQMVQQDKARGFVIGESFFRHGISSIVYPVYDRSGRVAAVVSILVPSEEIPQSDRER LQNEVRLAADKISGFLGYLSQAS >gi|333596725|gb|GL892087.1| GENE 1477 1634687 - 1635436 231 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 244 4 238 242 93 33 3e-17 MNGLLSGKRIVVTGAARGLGYHFARACAEQGAAVVMCDILKGELAESAHRLREQGYAIES HVIDLADPHSIEQVFSSVGEQGQIDGLVNNAAMATGVGGKNMLDYDPDLWDRVMSVNVKG TWLVTRAAVPLLREGAGIVNVASDTALWGAPRLMAYVASKGAVIAMTRSMARELGEKRIR INAIAPGLTRVEATEYVPAERHQLYENGRALTGAQQPEDVTGSVVWLLSDLSRFITGQLI PVNGGFVFN >gi|333596725|gb|GL892087.1| GENE 1478 1635436 - 1636458 1185 340 aa, chain - ## HITS:1 COG:PA3500 KEGG:ns NR:ns ## COG: PA3500 COG4638 # Protein_GI_number: 15598696 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 5 337 7 338 339 366 53.0 1e-101 MTTTVQNYLDKGLRGLWYPVLASWEVQSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHR GARLSMGWNLGDRIACWYHGVEVAGNGEVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFL WFGVTADQQPDELTFPDELADTENFSNFLCTAAWKCNYQYALENVMDPMHGTYLHSSSHS MAEGDRKADMVLQPTKTGFIFEKKGQSGVNFDWVELGNSGTCWMRLSIPYKKRFGPGGHF FIVGMVVPEDNDNCRVFFWRIRRVQGWQRDMWRFMYRNRLEKLHWEVLEQDRVVLESLAP NARDHEYLYQHDVGLSRLRRMMQKAAKEQLAMREAQQGAA >gi|333596725|gb|GL892087.1| GENE 1479 1636469 - 1636777 470 102 aa, chain - ## HITS:1 COG:no KEGG:ECL_04265 NR:ns ## KEGG: ECL_04265 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 102 1 102 102 183 92.0 2e-45 MSDTLNYNPALPESRQFTPPAEGGNGAIHKPGDYQNLIWQTRSREPESWEMNLIATLEDL FEQGVETLPELVSGLNAVRMHDQQGEPWSDASFQAFLQVNGY >gi|333596725|gb|GL892087.1| GENE 1480 1636774 - 1637097 333 107 aa, chain - ## HITS:1 COG:YPO0928 KEGG:ns NR:ns ## COG: YPO0928 COG2146 # Protein_GI_number: 16121233 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Yersinia pestis # 1 101 1 101 106 124 51.0 5e-29 MSWIGVCDAEQVQEDFPFSGNVDGKEIGVYLIDGEYYALEDVCPHAYALLSQGFVEDGKV ECPLHEAVFDVKTGQCLHGPGGRNLNRYPVRVFENQIQITFVEETVA >gi|333596725|gb|GL892087.1| GENE 1481 1637747 - 1638667 1361 306 aa, chain - ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 605 98.0 1e-173 MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRML SFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPNEGLIDPNH SVQIGIRTEFDKDNGFTVLDAGQVNDRGVDDILAQVKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ AAKKGE >gi|333596725|gb|GL892087.1| GENE 1482 1638887 - 1640785 2616 632 aa, chain - ## HITS:1 COG:STM3086 KEGG:ns NR:ns ## COG: STM3086 COG1166 # Protein_GI_number: 16766387 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Salmonella typhimurium LT2 # 1 632 27 658 658 1265 95.0 0 MSSQEASKMLRTYNIAWWGNNYYDVNELGHISVCPDPDVPEARVDLAKLVKAREAQGQRL PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC SVNYGLNEYANNIIWAIGDACEEHGLPHPTVITESGRAVTAHHTVLVSNIIGVERSEITE ATPPADDAPRSLQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHVGYSSGTFSLQERA WAEQLYLNMCHEVQKQLDPSNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFP VLPLEGLNHAPERRAVLLDITCDSDGAIDHYVDGDGIATTMPMPEYDPENPPMLGFFMVG AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLEYVQLDPKKLLTQFRD QVKNTGLDDALQQQFLEEFEAGLYGYTYLEDE >gi|333596725|gb|GL892087.1| GENE 1483 1641664 - 1642818 1506 384 aa, chain + ## HITS:1 COG:ECs3818 KEGG:ns NR:ns ## COG: ECs3818 COG0192 # Protein_GI_number: 15833072 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 768 97.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEITTS AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQ GLMFGYATNETDVLMPAPVTYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVG IDAVVLSTQHAEEIDQKSLQEAVMEEIIKPVLPTEWLSSATKFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYQETAAYGH FGREHFPWEKTDKAALLRDAAGLK >gi|333596725|gb|GL892087.1| GENE 1484 1643235 - 1644632 1925 465 aa, chain + ## HITS:1 COG:STM3091 KEGG:ns NR:ns ## COG: STM3091 COG0477 # Protein_GI_number: 16766392 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 465 1 464 464 833 95.0 0 MPDNNKQGRTSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFITDEFQISAHTQEWVVS SMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAV GVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYSGAWRWMLGVIII PAVLLLIGVFFLPDSPRWFAAKRRFHDAERVLLRLRDTSAEAKNELEEIRESLKVKQSGW ALFKENSNFRRAVFLGVLLQIMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLT NVLATFIAIGLVDRWGRKPTLTLGFLVMAVGMGVLGTMMHMGIHSPTAQYFAVAMLLMFI IGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFW VYAGLNLFFIVLTIWLVPETKHVSLEHIERNLMKGRPLREIGAHD >gi|333596725|gb|GL892087.1| GENE 1485 1644692 - 1645189 400 165 aa, chain + ## HITS:1 COG:ECs3820 KEGG:ns NR:ns ## COG: ECs3820 COG3091 # Protein_GI_number: 15833074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 281 86.0 4e-76 MKAPRLPIAIQQAVMRSLREKLAQANLKLGRNYPEPKLVYQQRGTAAGTAWLEAYEIRLN PVLMMENQQAFVEEVVPHELAHLLVWKHFGRVASHGKEWKWMMEAVLGVPARRTHQFELE SVRRNTFPYRCQCQQHQLTVRRHNRVVRGEATYRCVKCGEPLVAE >gi|333596725|gb|GL892087.1| GENE 1486 1645284 - 1645991 623 235 aa, chain + ## HITS:1 COG:ECs3821 KEGG:ns NR:ns ## COG: ECs3821 COG2356 # Protein_GI_number: 15833075 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 406 86.0 1e-113 MSRNVSLAVAFLATALSGHALADGIHSFSQAKTAGVKINADVPGDFYCGCKINWQGKKGV VDLASCGYKVRKNENRASRIEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRQMESDMH NLQPAVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKVAEPPARARGSIARTYFYMR DRYDLNLSRQQTQLFNAWDKLYPVTDWECQRDERIAKVQGNHNPYVQRACQAQKS >gi|333596725|gb|GL892087.1| GENE 1487 1646043 - 1646774 687 243 aa, chain + ## HITS:1 COG:ECs3822 KEGG:ns NR:ns ## COG: ECs3822 COG1385 # Protein_GI_number: 15833076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 243 10 252 252 436 89.0 1e-122 MRIPRIYHPELITPGGEIALSDDAANHVGRVLRMGAGQAIQLFDGSNQVFDAEITRADKK SVHVKVLRGDVDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD AERLNKKIQQWQKIAIAACEQSGRNRIPEIRPAMDLEDWCAEEESGLKLNLHPRASASIN TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|333596725|gb|GL892087.1| GENE 1488 1646806 - 1647753 338 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 310 6 319 345 134 31 1e-29 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMNDLYLINGEARARTRIVNVE QNYEKWYEFGTEQDIALADLNVILMRKDPPFDTEYIYSTYILERAEEKGTLIVNKPQSLR DCNEKLYTAWFSDLTPETLVTRSKTQLKAFWQKHGDIIMKPLDGMGGASIFRVKEGDPNI GVIAETLTELGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGG RGEPRPLSESDWEIARRVGPTLKAKGLIFVGLDIIGDRLTEVNVTSPTCIREIEAEFPIS ITGMLMDAIEKRLQK >gi|333596725|gb|GL892087.1| GENE 1489 1647828 - 1648388 669 186 aa, chain + ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 186 25 211 211 328 87.0 5e-90 MNLQHHFLIAMPALQDPIFRRSVVYICEYNEDGAMGIIINKPLENLQVEGILDKLKIPAE ARLPEIRLDKPVMLGGPLAEDRGFILHTPPVFSSSIRISDNTVVTTSRDVLETLGTASQP SEVLVALGYASWEKGQLEQEILDNAWLTAPADMNILFKTPIADRWRDAAKLIGIDILTMP GVAGHA >gi|333596725|gb|GL892087.1| GENE 1490 1648388 - 1648804 429 138 aa, chain + ## HITS:1 COG:ECs3825 KEGG:ns NR:ns ## COG: ECs3825 COG0816 # Protein_GI_number: 15833079 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 260 91.0 4e-70 MSGTLLAFDFGTKSIGVAVGQRITGTARPLTALKANDGTPDWNLIERLLKEWQPDDVIVG LPLNMDGTEQPLTARARKFANKIHGRFGVSVKLHDERLSTVEARAGLFEHGGFRALNKGS VDSASAVIILESYFEQGY >gi|333596725|gb|GL892087.1| GENE 1491 1648815 - 1649795 990 326 aa, chain - ## HITS:1 COG:yggR KEGG:ns NR:ns ## COG: yggR COG2805 # Protein_GI_number: 16130851 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli K12 # 1 326 16 341 341 467 74.0 1e-131 MDVEEIVALSVKHNVSDLHLCSDSPPRWRRSGRLEPAPFPPPDVEALLKAWLNDEQQGAW WANGQVDFAVTLAGRQRLRGSAFKHMHGVSIALRLLPLTCPQLSALGVPRAIPELLSNDN GLILVTGATGSGKSTTLAAMVDFLNHHTDGHILTLEDPVEFMYQSERCLIQQREIGQHSP SFAEALRSALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAIERLVDT FPAQEKDPVRNQLAGSLRAVLAQKLRQDVQGGRVALYELLVNTSAAANLIREGKTWQLPG IVQTGQQAGMQNFEQSLAERRAQGRL >gi|333596725|gb|GL892087.1| GENE 1492 1649813 - 1650514 681 233 aa, chain + ## HITS:1 COG:ECs3826 KEGG:ns NR:ns ## COG: ECs3826 COG0325 # Protein_GI_number: 15833081 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Escherichia coli O157:H7 # 1 233 1 233 234 380 84.0 1e-105 MNDIAHNLAQVRDKISAAATRCGRASEEVTLLAVSKTKPASAIAEAIVAGHRAFGENYVQ EGVDKIRAFRERGNTDLQWHFIGPLQSNKSRLVAEHFDWCHTLDRLRIATRLSDQRPMEM PALNVLIQINISDENSKSGIRLSELDQLAADVAALPRLTLRGLMAIPAPESSYERQFAVA QQMAVAFEALKARYDTVDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYTQ >gi|333596725|gb|GL892087.1| GENE 1493 1650536 - 1651102 634 188 aa, chain + ## HITS:1 COG:ECs3828 KEGG:ns NR:ns ## COG: ECs3828 COG0762 # Protein_GI_number: 15833082 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 242 84.0 3e-64 MKTLTFLLSTVIELYTMALLLRVWMQWARCDFYNPFSQFIVKITQPVVGPLRRVIPAMGP IDSSSLLMAFILSVIKAIVLFMVITFQPIIWIAAVLILVKTVGSLIFWVLLVMAIMSWVS RGRSPVEYALIQLTEPLLRPIRSLLPAMGGIDFSPMLLVLLLYVLNMGIAELLQATGNML LPGLWMAL >gi|333596725|gb|GL892087.1| GENE 1494 1651099 - 1651395 235 98 aa, chain + ## HITS:1 COG:STM3102 KEGG:ns NR:ns ## COG: STM3102 COG1872 # Protein_GI_number: 16766403 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 96 1 96 96 158 84.0 2e-39 MSAVSPCADGLVLRLYIQPKASRDSIVGLHGDELKVAITAPPVDGQANAHLTKYLAKQFR VAKSQVIIEKGELGRHKQVKILNPQSIPTEVAALTEQD >gi|333596725|gb|GL892087.1| GENE 1495 1651399 - 1651992 924 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|24114209|ref|NP_708719.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella flexneri 2a str. 301] # 1 197 1 197 197 360 90 1e-97 MQKVVLATGNAGKVRELASLLNDFGLDVVAQTDLGVESAEETGLTFIENAILKARHAAQV TGLPAIADDSGLAVDFLGGAPGIYSARYSGVDATDQQNLEKLLVALKDVPDDQRTAQFHC VLVYMRHAEDPTPIVCHGSWPGVITREAAGNGGFGYDPIFFVPTEGKTAAELTREEKSAI SHRGRALKLLLEALRNG >gi|333596725|gb|GL892087.1| GENE 1496 1651985 - 1653133 1232 382 aa, chain + ## HITS:1 COG:yggW KEGG:ns NR:ns ## COG: yggW COG0635 # Protein_GI_number: 16130856 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli K12 # 1 378 1 378 378 728 91.0 0 MANLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVPYAQGREVK TIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVEYQRAGVNR ISIGVQSFSEPKLKRLGRIHGPEEAKRAANLATGLGLRSFNLDLMHGLPDQSLEEALDDL RQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYKQYETSA YAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYMEGRYLERQH DVEAADKPFEFFMNRFRLLEAAPRAEFALYTGLSESVIRPQIDEALAQGYLTESDESWQI TEHGKLFLNSLLELFLAEDPEG >gi|333596725|gb|GL892087.1| GENE 1497 1653190 - 1653552 98 120 aa, chain + ## HITS:1 COG:ycjD KEGG:ns NR:ns ## COG: ycjD COG2852 # Protein_GI_number: 16129250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 4 116 5 117 117 138 62.0 3e-33 MEIIRSYAKQLRRELTKEERRLWYLLRSRRFENYKFRRQHPLGNYILDFACCAVRLAVEL DGGQHDENQEYDRQRTLWLNRKGWYVIRFWNNELWDNEEAVLERILETLQMLQPSPRPSP >gi|333596725|gb|GL892087.1| GENE 1498 1653726 - 1654442 1008 238 aa, chain - ## HITS:1 COG:no KEGG:ECL_04285 NR:ns ## KEGG: ECL_04285 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 238 1 238 238 416 94.0 1e-115 MRKTLLAVALLAIGSTAHAEYKCSVTPRDDVVLSPQTVQVKGENGNLVITPDGNVTFNGK PQNLTAAQREQAMDYQAELRTALPWINDGALTRVEKGRVALDKIITKEVGESSNMRTRLT KLDKQLKEQMNRIIETRSDGLTFHYKAIDQVRADGQQLVNQAMGGILQDSINEMGAKAVL KGGGNPLQGVLGSLGGLQTSIQNEWKNQEADFQQFGKDVCKRVVSLEDSRKALVGTLK >gi|333596725|gb|GL892087.1| GENE 1499 1654500 - 1654826 481 108 aa, chain - ## HITS:1 COG:yggL KEGG:ns NR:ns ## COG: yggL COG3171 # Protein_GI_number: 16130860 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 108 11 118 118 183 87.0 5e-47 MAKNRSRRLRKKMHIEEFQEVGFSVAWRFPEGTSVEQIDQDVDAFINEVIEPNKLAFDGS GYLAWEGLICTQEVGKCTEEHQALVRKWLEDHKLEDVRVSELFDVWWD >gi|333596725|gb|GL892087.1| GENE 1500 1654826 - 1655545 680 239 aa, chain - ## HITS:1 COG:STM3109 KEGG:ns NR:ns ## COG: STM3109 COG0220 # Protein_GI_number: 16766410 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 460 91.0 1e-129 MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQQHALDNYWPVMGVEFSEQPLDFTDLF GRDAPVKLEIGFGMGTSLVTMAKACPEQNFLGIEVHSPGVGACLATAHEEGVENLRVMCH DAVEVLHKMIPDNSLNMVQLFFPDPWHKARHNKRRIVQAPFAELVKSKLKLGGVFHMATD WEPYAEHMLEVMSSLDGYKNQSESNDYVPRPDSRPVTKFEQRGHRLGHGVWDLMFERVK >gi|333596725|gb|GL892087.1| GENE 1501 1655684 - 1656742 1073 352 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 8 345 11 366 378 417 58 1e-115 MTMQASQFSAQVLDWYDKYGRKTLPWQIEKTPYKVWLSEVMLQQTQVATVIPYFERFMAR FPTITDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATRHNGKFPETFDEVADLPGVG RSTAGAILSLSLGKHFPILDGNVKRVLARCYAVEGWPGKKEVEKRLWEISEAVTPAKGVE RFNQAMMDLGAMVCTRSKPKCELCPVNNLCVAYANHTWAQYPGKKPKQTLPERTGYMLLM QHGDEVFLAQRPPSGLWGGLYCFPQFEDEASLRAWLEQRGIAADTLTQLNAFRHTFSHFH LDIVPMWLPVSSFTSCMDEGTALWYNLAQPPSVGLAAPVERLLQQLRVGAMV >gi|333596725|gb|GL892087.1| GENE 1502 1656769 - 1657041 426 90 aa, chain + ## HITS:1 COG:STM3111 KEGG:ns NR:ns ## COG: STM3111 COG2924 # Protein_GI_number: 16766412 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 91 158 88.0 2e-39 MARTIFCTFLQRDAEGQDFQLYPGDLGKRIYNEISKDAWGQWQKKQTMLINEKKLSMMNP EHRKLLEQEMVNFLFEGKDVHIEGYTPPEK >gi|333596725|gb|GL892087.1| GENE 1503 1657163 - 1658242 1287 359 aa, chain + ## HITS:1 COG:STM3112 KEGG:ns NR:ns ## COG: STM3112 COG0741 # Protein_GI_number: 16766413 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Salmonella typhimurium LT2 # 1 359 1 361 361 650 87.0 0 MMKKLLALALVAPLLVSCSSKKGDEYNEAWVKDTNGFDILMGQFAHNIENIWGFNEVLIA GPKDYVKYTDAYQTRSHINFDDGTITVETIAGTEPAAHLRQAIIKTLLMGDDPGSIDLYS DADDITISKEPFLYGQVVDQTGQPIRWEGRATKFADYLLQTRLKSRTNGLKVIYSVTINL VPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQHS AGKDVFRAQGKSGTPSRSYLFDPQSNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYN GGAGSVLRVFSNDKVQAANIINSMAPGDVYATLTTRHPSAESRRYLYKVNTAQKNYRRR >gi|333596725|gb|GL892087.1| GENE 1504 1658529 - 1659785 1768 418 aa, chain + ## HITS:1 COG:STM3113 KEGG:ns NR:ns ## COG: STM3113 COG0477 # Protein_GI_number: 16766414 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 418 1 418 418 691 91.0 0 MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGI VADKWLSAKWLYMLCHLVGAGTLFMAAEVTTPGAMFMVILLNSLAYMPTLGLINTISYYR LKSAGLDIVTDFPPIRIWGTIGFIMAMWGVSFAGFELSHMQLYIGAALSVLLALFTLTLP TIPVSNQQKNQSWSTMLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDN DPLFAGSFIVEHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIAAWMLRFGLFAY GDPSAFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVKPEIRASAQGMFLMMTNGFGCIL GGVVSGKVVEMYTTNGITNWQPVWLIFAGYSLVLFFAFIALFKYKHVREPHGAQPVAH >gi|333596725|gb|GL892087.1| GENE 1505 1659836 - 1661971 2171 711 aa, chain - ## HITS:1 COG:ECs3841 KEGG:ns NR:ns ## COG: ECs3841 COG1982 # Protein_GI_number: 15833095 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 711 21 731 731 1325 86.0 0 MKTMKIAVSRELVSKVSTHREKVMLDNTDFTDVAAVVITVVESYSGILALLKRTGFQLPV FMFSTEPGEVPEGVTAIISGKAQEFLELESAACRYEEKLLPPFFDTLSQYVAMGNSTFAC PGHQHGAFFKKHPAGRQFYDFFGENVFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFN ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP FGFIGGIDEHCFDEAYLRNLIRDVAPDKAADARPFRLAVIQLGTYDGTIYNARQVIDKIG HLCDYVLFDSAWVGYEQFIPMMAETSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK KDNHIRGQSRFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG IEARKAIIANCTMIKPFIPPVVAGRPWQDHPTQAIASERRFFSFEPGAKWHGFEGYAREQ YFVDPCKLLLTTPGIDAETGHYTDFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES SEKLAQLVAMLGQFEQHIEDDTPLADVLPTIYQKYPVRYRDYTIRQLCQEMHDLYVSFNV KDLQKAMFRQESLPAVVMNPQDANQEYIRGNVELVRIRDAEGRIAAEGALPYPPGVLCVV PGEVWGGAVQRYFLALEEGINMLPGFSPELQGVYSEKDADGIKRLYGYVLK >gi|333596725|gb|GL892087.1| GENE 1506 1662156 - 1662866 687 236 aa, chain + ## HITS:1 COG:STM3115 KEGG:ns NR:ns ## COG: STM3115 COG1811 # Protein_GI_number: 16766416 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Salmonella typhimurium LT2 # 1 236 2 235 235 302 79.0 4e-82 MIGPFINAGAVLLGGVLGAVLSQRLPERIRVSMPSIFGLASLGIGILLVVKCANLPVMVL ATLLGALIGEFCYLEKGINNAVGKAKNLIARPGKTKHGTHETFIQNYVAIIILFCASGTG IFGSMQEGMTGDPSILIAKAFLDFFTATIFATTLGIAVAAICVPMLLIQLALATCATLIL PLTTPTMMADFTAVGGLLLLATGLRICGIKMFAVVNMLPALLLAMPLSALWTHFFA >gi|333596725|gb|GL892087.1| GENE 1507 1663355 - 1664401 592 348 aa, chain - ## HITS:1 COG:VC0972 KEGG:ns NR:ns ## COG: VC0972 COG3203 # Protein_GI_number: 15640988 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Vibrio cholerae # 25 348 30 349 349 240 43.0 4e-63 MNKTSKTILISLLTAVPTIANAMLVGGPKDFNLEIYGKLAMSVFATQANERNYDYTLDNE SYIGFRGNKEITEGINVIFQIESGYVGYEAEDSGLGKFDTFVGFEGKYGKLRFGRMKSAL YEIIDWPYTNPGLGRVFDWGGDVRWHQSNRMSNMMRYDGSLVTDDYGAFDVVLSVNRDDA TISGSTTYSSRITWTPYSTIKVHAAYEETRNKSDQPTDDTLNNNLEDASGYVLGLEVPIP DLGLRFYAGYKNGQTTDLKTHVKSTQDAYSLIGEYWHGIYGAKLGYAKNNDYKIDNVVQK DTADKVISLQLMLNMENGFLPYIRVGRTDAYNSTSNDNFYRAGLEFWF >gi|333596725|gb|GL892087.1| GENE 1508 1664455 - 1665312 441 285 aa, chain - ## HITS:1 COG:STM1127 KEGG:ns NR:ns ## COG: STM1127 COG1737 # Protein_GI_number: 16764484 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 18 285 24 293 293 134 32.0 1e-31 MKTRVGFNTLINTRINELTQTEIRIYQFIKNNRMRFIDMSIAKLADAMNVGEASIIRFCK KLGYKGLSELKTTLRLETDTDDTLLSKVTSLDEQTNSMTGIAQQLANNNYFAINETLALQ DEQALVRAADYLSNAGQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDNHTMTLNSNNV GKKDVVVAISHSGETRDVVDALRRVKEKGAVTIVISKLQHSSLSQYADVVLLTGGTSNPY QSDSSTITAAQSFMVDVLFNALLFINRGGNVEKIISSLDIINKTK >gi|333596725|gb|GL892087.1| GENE 1509 1665320 - 1665625 250 101 aa, chain - ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 2 101 16 115 115 98 55.0 3e-21 MSYEDDVMSLIIAAGEGRSCAMEALCFAKAGNFAEAEASLSVSADAFRQAHEIQTRIIGL DEGVGKVPVTLVMVHAQDHLMTGMLCRELVTELIEIYKKME >gi|333596725|gb|GL892087.1| GENE 1510 1665661 - 1665972 318 103 aa, chain - ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 101 1 101 101 95 51.0 2e-20 MNKILLVCAAGMSTSMLMKRMKDYACSIGHESVIEAHGVDVLKDVIAKYDVVLVAPQIRF KLAEIQKLAEMHGKKSDAINPLQYGAMNGEKVYQQAIDLISSK >gi|333596725|gb|GL892087.1| GENE 1511 1665997 - 1667541 812 514 aa, chain - ## HITS:1 COG:no KEGG:LAC30SC_09230 NR:ns ## KEGG: LAC30SC_09230 # Name: not_defined # Def: hypothetical protein # Organism: L.acidophilus_30SC # Pathway: not_defined # 1 506 1 485 492 300 37.0 1e-79 MNMICVPLDIRPYNYDFLISLASMDSKLSLKMPAKDILGYKKQPASHQAVDEFINSHCAD ADALIISLDMYLYGGLFPARIHQMELSELTARMNKIKSLKERYPSLKIYASSLVLRTPKY NSSEEEPDYYARIGHSIFQVGYLSDKEKRVGLSEDEKVELRAHHSAIDSASFDDWLSRRS KNLLLIEKAIELVDEKVLEQLIIPLDDTAEFGFTMQDQVRIYEKVSQLGVQDRVFVHPGT DESGCTLLTKAYLSLKEQDFLATTFYSNELFKHFIPNYEDRPFVHSLRSHAAASGLTLVD NDVSLPVLAINGCGEIMQEAFDISYGYNLQTGARKPTYKNITYYTHRDLGSYAKHIAARA ARVPVVVIDVAMSNGGETELVRALDKAGALDVIKGYAGWNTTCNSLGTGIAHLVFSTLGD NADAIERFYKERLISDWAYQTEVRFPVQFEYLPSIGLSYSSFAEKESSVFDKIKTEIENT WQENIKHSFNGCCPAITSISAPFQRMSGLHFTVV >gi|333596725|gb|GL892087.1| GENE 1512 1667556 - 1668878 517 440 aa, chain - ## HITS:1 COG:lin0033 KEGG:ns NR:ns ## COG: lin0033 COG1455 # Protein_GI_number: 16799112 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 15 438 11 430 452 315 41.0 1e-85 MDFINKVKSGGGIVFIDKLSNWAGAFSGQRHLSAVRESFVALMPLIIAASLFILINNVLL NGESGLVGFLGLEGAWINHLQEIGVRVYNGTLNILAFLATVMISYRLANSYGEDGITYAV FSLACLFVLFPVSIPVTAPAGEVFQVSGLISGNESGASGMFVGIFVALIATEVFRKVSAS PKLKITLSDSVPPSVSRSFNVLIPMILVLTLLSVFAWSLTSLFNKNIHEIVTLMIQAPLQ NILQGLSGVIGLLLTQNGLWWAGIHGASIMYPITETTLLVAIQENTAAFKAGLAIPHIVT KPFIDAYGFMGGGGQTIGLLIALWIAAKKADHRAITRLATPGMLFNINEPLIFGLPIMFN PVLIIPFLFTPVISIVIAYAATAMNIINHTYVLVPWTTPPVISAFLATGGDWRAAVLSVF LIGLSVIIYLPFVFAMNKQK >gi|333596725|gb|GL892087.1| GENE 1513 1669009 - 1669365 241 118 aa, chain - ## HITS:1 COG:no KEGG:ECL_04312 NR:ns ## KEGG: ECL_04312 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 117 57 173 175 169 82.0 4e-41 MLDMRHREENLLDMKLFLNTSLTAPDMASLFNLVLNMKGRRLTTKWLLNLRLSTHEAIML RLLRAGMSMEAIAAELHMSVKSLYRKRTALSERLGAENFNEACLFIFRNKLLSLNENP >gi|333596725|gb|GL892087.1| GENE 1514 1669810 - 1670058 148 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLPKYGQESSLITPDKRHLKYKQSCYIKNKSHLFQQVANSNPFLNNHLTLPIPDLSQNH TRAFQHIYPPVYQVYITSNPTH >gi|333596725|gb|GL892087.1| GENE 1515 1670205 - 1672643 1801 812 aa, chain + ## HITS:1 COG:no KEGG:ECL_04313 NR:ns ## KEGG: ECL_04313 # Name: pgaA # Def: biofilm PGA synthesis protein PgaA # Organism: E.cloacae # Pathway: not_defined # 1 812 15 826 826 1201 78.0 0 MERSLRFTTLFFYRTTILLFLLLLFPVLVWAGESVYEHQIQQARNGNYALFLDYLQRYEQ QHALTPEQVADWLQVASWAGRDDEVIRVWQRYGIYMPLPARAIAAVAQSRRNQKAWPSAL SLWKEAQSLAPDNDDYRIGYVKTLADARRDRLALSEARQLVKDDPSPAHLEALSYVWMRQ GKNADRLLADMRALNAAPGNNALLRETIEALTDNRVSTPALWLSQSAAMSAAERRRLERN AAAERVRLADVPGRTEKARLRLAQNALDRYHALLSRWQNEPQAAEDVILARIDRLGALYA HGDYQQVISEYQALTAAQHPVPDWAIGWVISACLQEKNTAAAFSLVQRYPQYAADPQDEE HALFYAWLDTGQYQSAHEYVERETRSVPWIRYDFGSPTPQPNDRWLTGQTLKLNYLLATN ALPEAEELSYRLASTAPGNQGLQIDYATLLQARGLPRAAEKKLKMAEALEPSSTELEQQQ AYVAMDLQAWREMDLLTDDVLARAPVDRSVQRLDRIRNVHHMSELRLNAGKGLHSDNPVS GSHDFTWDATLYGPPVADNWRLFAGTRFAQGRFDEGKGTSRHLSGGVEWRPRDLTLEAEL SSNRYHGTNRPGARLSTIYSLNDNWQVSGSLERLSRTTPLRALRNGISANRGEGGVRWYQ NERREYQFNAAVSRFSDHNRRQEYTLAGKERLWQTPTLTLDLEPGIAASKNSLRDTLYYN PARDLSVTAALSADHEMYRHYDTRWSQQFVAGGGSYWQKNQSTGVITLMGYGQRLQWNNV VDTGVMLNWDKRPYDGKRESNLSVTLDATLRF >gi|333596725|gb|GL892087.1| GENE 1516 1672652 - 1674589 1721 645 aa, chain + ## HITS:1 COG:YPO1952 KEGG:ns NR:ns ## COG: YPO1952 COG0726 # Protein_GI_number: 16122198 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Yersinia pestis # 11 645 11 672 673 757 55.0 0 MLNTRFSVSLIVIGWLCLSASLCAQPLSFMAPKERPQLEASKPWPENQFLVLAYHDVEDD AADQRYLSVRTSALNEQISWLLHNGYHAISVQDILDAHEGKKALPPKAVLLSFDDGYSSF YTRVWPLLQAWNVPALWAPVGSWVDTAANQNVNFGGLMTPRDRFATWDMVRELSQSPLIE IGSHTWASHYGIPANPQGSREPAIANRFFDKATGHYETDEQFNQRIAADVRKVTDKITRV TGKAPRAWVWPYGAANGTSLAIAQKQGYQLAFTLEDGLGNVRDLGNIPRLLIAGNPSIKA FANTVTRVQEFDPVRVMHVDLDYVYDPDPAQQTKNINKLVQRVYDMKISHVFLQAFSDPR GDGRIGALYFPNRRLPVRADLFNFVAWQLQTRAGVKVFAWMPVLSFDLDPSLPRVQRRDR QTGELTVATEPYIRLSPWDPQVRQQVTEIYEDLARYASFNGILFHDDAVLTDVDDAGQDT TRQKSQLLIGFTRTLSQAVKNIRGPQIKTARNMFALPILQPESEAWFAQNLDDFLSAYDW TVPMAMPLMESVPAEESNAWLTRLVKAVAVRPGALNKTIFELQARDWAQKPQRAVADERL VEWMQVLQLNGIKNYGYYPDDFINNQPDMSRIRPEFSSYWYPDND >gi|333596725|gb|GL892087.1| GENE 1517 1674582 - 1675913 1118 443 aa, chain + ## HITS:1 COG:YPO1953 KEGG:ns NR:ns ## COG: YPO1953 COG1215 # Protein_GI_number: 16122199 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Yersinia pestis # 1 443 1 443 444 638 70.0 0 MTDRILAFSILCLVFGLPLGVAALFTGELILDFVFFWPLFMSVLWVTGGLYFWFQLERHW SWDDATPAPALAGEPLISILIPCFNEERNARETISAALDQRYWNVEVIAINDGSSDNTAE VLYQLAQEQPRLRVINLAENQGKAVALKAGAAAARGDLLVCIDGDALLDRDTAAYLVAPL IQYPHVGAVTGNPRIRTRSTLIGRIQVGEFSSIIGLIKRTQRIYGRVFTVSGVIAAFRRQ ALADVGYWSPDMITEDIDISWKLQLRHWDIFFEPRALCWILMPETLKGLWKQRLRWAQGG AEVFLVNLRKMARWEHHRMWPLFLEYALSTLWAFAYGATVVLFILSHIIPLPANLAVASL FPPAFTGLLLGVMCLLQFLVSLYIERRYERKVAGSLFWVIWFPMVYWMIGLFTTLVAFPK VMLKRKRARARWISPDRGKGSIQ >gi|333596725|gb|GL892087.1| GENE 1518 1675910 - 1676344 413 144 aa, chain + ## HITS:1 COG:no KEGG:ECL_04316 NR:ns ## KEGG: ECL_04316 # Name: pgaD # Def: biofilm PGA synthesis protein PgaD # Organism: E.cloacae # Pathway: not_defined # 1 141 1 142 142 211 82.0 7e-54 MNENTLILTEHRLAPRLFDAVLTLIAWGGFLFFLYARLWMQLTEESDHRWSVIIASFNTV LVYLLIAALNGWLLILWYQYNRRRAHVRRRHPEMLRHDELAQSFNVTPQIMSEMSQYNLL TIYHDQIGRIIDLKISEQHEEDEQ >gi|333596725|gb|GL892087.1| GENE 1519 1676396 - 1678258 2250 620 aa, chain - ## HITS:1 COG:STM3139_2 KEGG:ns NR:ns ## COG: STM3139_2 COG0754 # Protein_GI_number: 16766439 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Salmonella typhimurium LT2 # 233 618 1 386 387 712 85.0 0 MRKGTLSSDAPFGTLLGYAPGGVAIYSSNYGSLDPRHYPEDAEFRSYIGNEYMGHKWQCV EFARRFLFLNHGFVFTDVGMAWEIFSLRFLREVVNDNILPLQAFANGSKRAPQAGALLIW QKGGEFHETGHVAVITQLLDDRVRIAEQNVIHSPLPMGQQWTRELRLSVEDGCYTLHDTF NDTEILGWMIQTEETEHSIPQPEIDGELLKISGARLKNHRQFDGKWLNENDALQQAYIRA NGHVINNDPCQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPR LRLSWQWRRHHMITGRMDFCMDERGIKVYEYNADSASCHTEGGLILEEWVKNGYRGTGHN PAEGLLEELTGAWKHSHARPFVHIMQDNDIEEDYHALFIQRSLMQAGFDTKILHGLGALS WDAAGQLIDDEGRHVNCVWKTWAWETAIEQIREVSETEYAAVPIRTGHPQGEVRLIDVLL RPEVLVFEPLWTVIPGNKAILPVLWQLFPNHRYLLDTDFEVNDLLKRTGYAVKPIAGRCG SNIDLIGAQDELLDQSSGKFVDRKNIYQQLWCLPKIDGKYIQVCTFTVGGNYGGTCLRGD DSLVVKKESDIEPLIVVKDK >gi|333596725|gb|GL892087.1| GENE 1520 1678442 - 1679308 1167 288 aa, chain + ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 288 17 304 304 513 84.0 1e-145 MSDNTYQPPKVWEWKQNNGGAFANINRPVSGATHEKELPVGAHPLQLYSLGTPNGQKITI MLEELLALGVTGAEYDAWLIRIGEGDQFSSGFVDVNPNSKIPALRDHSTTPPTRVFESGN ILLYLAEKFGHFLPKDPAGRTETLNWLFWLQGAAPFLGGGFGHFYNYAPVKIEYAIDRFT MEAKRLFDVLDKQLARGRYVAGEEYTIADMAVWPWFGCVALGSVYNAAEFLDAGKYTNVQ RWAKDVANRPAVKRGRIVNRTNGELNEQLHERHSASDFDTQTEDKRQG >gi|333596725|gb|GL892087.1| GENE 1521 1679489 - 1679764 280 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAMDKTATGAVAGAAIGAIAGKDVKSTVGGAVVGAGTGAMFKNGDKGKAARTGGAVGAAV GAGAAALTGKSVLKGAAVGAGSGALIGEATH >gi|333596725|gb|GL892087.1| GENE 1522 1679880 - 1680626 828 248 aa, chain + ## HITS:1 COG:ECs3665 KEGG:ns NR:ns ## COG: ECs3665 COG1349 # Protein_GI_number: 15832919 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 6 248 1 242 243 317 66.0 2e-86 MSDSPLKQTRQQAILDLLGKSDWLATDVLAEKLAVSKETIRRDLKALQQQGKILRQHGRA RLIHPDSRDSGEPFVARLKSHYADKADIARHALGWISEGMTIALDASSTCFHLARQLPDI DLTVFTNSLPVCHEMAKRERITLICSGGTLDRKYRCYVNPALVTQLKGLEIDLFIFSCEG VDEHGILWDPSEHNAGFKALLLNRASQSLLLIDKSKFKRASEVKIGQLLQVTQIIQSDKC QAARDGLT >gi|333596725|gb|GL892087.1| GENE 1523 1680632 - 1682179 1629 515 aa, chain - ## HITS:1 COG:STM3152 KEGG:ns NR:ns ## COG: STM3152 COG0840 # Protein_GI_number: 16766452 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 515 1 515 547 670 76.0 0 MKMLRNFTIRFVMLTILGIFCVMWAGGGLYSTWSLSRVSDGNEVDRQLVRQMTVLSQGND QYFRFVTRLSRAMEVKAAGGTPDLASAQQALDNMSKKLAEMKAISPGPMDEKVSAQVIST WQALLDQGVTPQMAQAKQATIEGYRQHANNVTPPLSRAFGAAAENFNNTAAKALDSTRVV VDSLTSMTRTVIITATIVGLLILLFTDRYLVAILVKPLDRIRQQFRQIAQGDLSQPIESL GRNCVGQLVPLLSAMQDSLREAVSTIRSGSENIWRGATEISSGNNDLSSRTEEQAAALEE TAASMEQLTATVKLNAESARQASQLADVASSTASRGGSLVDDVVTTMSGISDSSKKIAEI TTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSANAAKEIEGLIADS VARVEQGAKLVNDTGTTMEAILRDVTEVTVIMKQIATASEEQSKGISQVGVAITQMDGVT QQNASLVEQVSAAAAALERQTEELQRSVQKFRLTA >gi|333596725|gb|GL892087.1| GENE 1524 1682286 - 1683371 1235 361 aa, chain + ## HITS:1 COG:yghZ KEGG:ns NR:ns ## COG: yghZ COG0667 # Protein_GI_number: 16130899 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 16 361 1 346 346 615 87.0 1e-176 MKTLFRNFTDKKGDIMSWHPYTGRYENMQYRYCGKSGLRLPALSLGLWHSFGHVQALDSQ RALLRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFSGYRDELIISTKAGYDMWPG PYGSGGSRKYLLASLDQSLKRMGVEYVDIFYSHRVDENTPMEETAAALAHAVQSGKALYV GISSYSTERTTAMAELLREWKIPLLIHQPSYNLLNRWVDKTGLLDALEKNGTGCIAFTPL AQGLLTGKYLNGIPDGSRMQREGKKVRGLTEKMLTEANLSSLRLLNEMAHARGQTMAQMA LSWLLKDERVTSVLIGASRPEQLEENVQALNNLRFSEDELTRIDQHVADGELNLWQASSD K >gi|333596725|gb|GL892087.1| GENE 1525 1683448 - 1683936 745 162 aa, chain - ## HITS:1 COG:PA4574 KEGG:ns NR:ns ## COG: PA4574 COG2862 # Protein_GI_number: 15599770 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 161 1 161 162 252 87.0 3e-67 MERFFENAMYASRWLLAPVYFGLSLALVALTIKFFQEIFHVLPNIFSVAEADLILVLLSL VDMTLVGGLLVMVMFSGYENFVSQLDIAEHKEKLNWLGKMDASSLKNKVAASIVAISSIH LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDKISKK >gi|333596725|gb|GL892087.1| GENE 1526 1683980 - 1684483 420 167 aa, chain - ## HITS:1 COG:no KEGG:ECL_04325 NR:ns ## KEGG: ECL_04325 # Name: not_defined # Def: putative ATP-dependent RNA helicase-like protein # Organism: E.cloacae # Pathway: not_defined # 1 167 1 167 167 296 93.0 2e-79 MNSIFFTVITLLLLTAGVLLLMQEFNKTKVSKDASEPPQPELMSKEEGEDHFSVLMNAVT PVWYWRVNHEYIDFLHATIKRMKMAEINDTPGLFDAQRRCSDLNSAVYKYYDNIKKRCLN GEKVSYSDLDVLNLRQCFREFSLEAYPELVALVWPEYARPDVDPNEV >gi|333596725|gb|GL892087.1| GENE 1527 1684586 - 1684990 358 134 aa, chain + ## HITS:1 COG:no KEGG:ECL_04326 NR:ns ## KEGG: ECL_04326 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 134 1 134 134 223 88.0 2e-57 MLPDNLVPAKYHITPVEQPSTEADKEANFTQGKRKLSDYEADILIGVSRTGKSRNMVLEE HDRHLKERLFRAIKIEALVHLLNDLQAEGEIDAQTLSQIMAEKTQQINEAGNEIWLNLIT REKNNPIFYKLGED >gi|333596725|gb|GL892087.1| GENE 1528 1685103 - 1685417 378 104 aa, chain + ## HITS:1 COG:no KEGG:ECL_04327 NR:ns ## KEGG: ECL_04327 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.cloacae # Pathway: not_defined # 1 98 38 135 149 159 90.0 5e-38 MTRITQDLISIPATLVRLKWQNRREIYALQAKEEIYGAVMNAIIEQRPELKEKILGRLEA NYQYLLARETATLRLTRKLSEGHYRTSNVTCVALDEKAPTAPSE >gi|333596725|gb|GL892087.1| GENE 1529 1685498 - 1685923 640 141 aa, chain - ## HITS:1 COG:ECs3889 KEGG:ns NR:ns ## COG: ECs3889 COG0848 # Protein_GI_number: 15833143 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 229 86.0 2e-60 MAMRLNENLDDNGEMHEINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASSSQPQPRP EKPIYLSVKADKSLFLGNDPVTDASVIPALDQLTGGKKDTTVFFRADKTVDYETMMKVMD TLHQAGYLKIGLVGEEKAAAK >gi|333596725|gb|GL892087.1| GENE 1530 1685928 - 1686644 1030 238 aa, chain - ## HITS:1 COG:STM3159 KEGG:ns NR:ns ## COG: STM3159 COG0811 # Protein_GI_number: 16766459 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Salmonella typhimurium LT2 # 1 238 6 244 244 388 89.0 1e-108 MQTDLSVWGMYQHADIVVKIVMIGLILASVITWAIFFSKSAELLSQKRRLKREQKQLAEA RSLDQASDITSSFHAKSLTTLLVNEAQNELELSAGSEDNEGIKERTGFRLERRVAAVGRH MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL VAAIPAVVIYNIFARMIGSYKATLGDVAAQVLLLQSRDLDLNASAVKPVHAASKLRVG >gi|333596725|gb|GL892087.1| GENE 1531 1686911 - 1688098 1412 395 aa, chain + ## HITS:1 COG:ECs3892 KEGG:ns NR:ns ## COG: ECs3892 COG0626 # Protein_GI_number: 15833146 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli O157:H7 # 1 395 1 395 395 715 85.0 0 MTKKQLETTLVQAGRSKKYTQGSVNSVIQRASSLVFDTVEDKKIATRNRAKGGLFYGRRG TLTHFSLQEAMCELEGGAGCALFPCGAAAVANTILAFVEQGDHVLMTNTAYEPSQDFCTK ILSKLGVTTSWFDPLIGAGIAGLVQPNTRVVFLESPGSITMEVHDVPAIVKAVRSIAPEA IIMIDNTWAAGVLFKALEFDIDISIQAATKYLIGHSDGMIGTAVSNARCWDQLRENAYLM GQMVDADTAYMTSRGIRTLGVRLRQHHESSLQIAQWLALHPQVERVNHPALPGSKGHEYW QRDFTGSSGLFSFVLKKRLNDAELARYLDNFTLFSMAYSWGGFESLILPNQPEQIAALRP GGEVDFEGTLIRLHIGLENVDDLIADLSAGFERIV >gi|333596725|gb|GL892087.1| GENE 1532 1688241 - 1688900 709 219 aa, chain + ## HITS:1 COG:ECs3893 KEGG:ns NR:ns ## COG: ECs3893 COG0586 # Protein_GI_number: 15833147 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 347 86.0 8e-96 MAVIQNIITALWQHDFAALADPHVVGIVYFVMFATLFLENGLLPASFLPGDSLLLLAGAL IGKGVMDFAPTMVILTSAASLGCWLSYLQGRWLGNTRVVKGWLAQLPHKYHQRATCMFDR HGLLALLAGRFLAFVRTLLPTMAGISGLSNRRFQFFNWLSALLWVGVVTTLGYALNMIPF VKHHEDQVMTFLMILPIFLLVAGLVGTIAVVIKKKYCSA >gi|333596725|gb|GL892087.1| GENE 1533 1688947 - 1689846 838 299 aa, chain - ## HITS:1 COG:yqhC KEGG:ns NR:ns ## COG: yqhC COG2207 # Protein_GI_number: 16130908 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 298 77 374 375 517 84.0 1e-147 MNRDAICRQLTSQIKRLINNENTTADLLPDIRLLYGTQPGPRTPVMYQPGIVFLFSGHKI GYINERVFRYDTNEYLLLTVPLPFECETFATEAVPLAGIRVNVDILQLQELLMEIGEDEL FRPSMAASGINSATLSEEILCAIERLLDVMERPLDARILGKQIIREILYHVLMGPGGGAL LALVSRQTHFSLISRVLKRIESQYTENLSVDQLAAEANMSVSAFHHNFKSVTSTSPLQYL KTYRLHKARMLMIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDASRIRTMQGA >gi|333596725|gb|GL892087.1| GENE 1534 1690042 - 1691205 1661 387 aa, chain + ## HITS:1 COG:STM3164 KEGG:ns NR:ns ## COG: STM3164 COG1979 # Protein_GI_number: 16766464 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Salmonella typhimurium LT2 # 1 387 1 387 387 686 88.0 0 MNNFNLHTPTRILFGKNAIADLRAQIPTGARVLITYGGGSVKKTGVLDQVYSALEGLDVR EFGGIEPNPSYETLMNAVKIARDEQITFLLAVGGGSVLDGTKFIAAAAHYADGIDPWHIL ETGGSDINSAIPMGSVLTLPATGSESNKGAVISRKTTGDKQAFMNEHVQPVFAILDPVYT YTLPARQVANGVVDAFVHTVEQYVTYPVNAKIQDRFAEGILLTLIEEGPKALKEPENYDV RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAVVLPALWNEKRDTK RAKLLQYAERVWNITDGSDDARIDAAIEATRHFFESLGVPTRLSGYGLDGSSIPALLAKL EAHGMTQIGEHGDITLDVSRRIYEAAR >gi|333596725|gb|GL892087.1| GENE 1535 1691311 - 1692138 925 275 aa, chain + ## HITS:1 COG:STM3165 KEGG:ns NR:ns ## COG: STM3165 COG0656 # Protein_GI_number: 16766465 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 494 90.0 1e-140 MANQTVIKLQDGNVMPQLGLGVWKAGNDEVVSAIHKALEVGYRSIDTAAAYKNEDGVGKA LASAGVPRDELFITTKLWNDDQKRPREALQESLEKLQLDFVDLYLMHWPVPAIDHYVDAW KGMIELQKEGLIKSIGVCNFQVHHLQRLIDETGVAPVINQIELHPLMQQRQLHSWNATHK IQTESWSPLAQGGEGVFDQKIIRELADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAE NFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG >gi|333596725|gb|GL892087.1| GENE 1536 1692229 - 1694403 2601 724 aa, chain - ## HITS:1 COG:ECs3900 KEGG:ns NR:ns ## COG: ECs3900 COG1032 # Protein_GI_number: 15833154 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 707 1 707 739 1405 94.0 0 MSAISLIQPDRDLFSWSQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS FGMAICGRMLEAQGFRVGIISQPDWNSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRK LRHDDAYTADNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR RSVLVDSKADMLIFGNGERPLVEVAHRLAQGEPVSEIRDVRNTAIMVKEALPGWSGVDSR IIDMPGKIDPIPHPYGEDLPCADNKPVEPKKAEAKAVVVQPPRPKPWEKTYVLLPSYEKV KSDKVLYAHASRILHHETNPGCARALMQKHGERYIWVNPPAIPLSTEEMDSVFALPYKRV PHPSYGNSRIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEESIVNEIEAIRD TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPSICEHMDTNHEPTINLYRR ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM GSYDRFKQLFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKQRRFRLDQVQNFY PSPLANSTTMYYTGKNPLSKIGYKSEDVVVPKGDKQRRLHKALLRYHDPKNWPLIRQALE EMGKKHLIGSRRDCLVPAPTLEEMREARRQNRNTRPALTKHTPIVHQRSNGGAGTKKNVK RKTG >gi|333596725|gb|GL892087.1| GENE 1537 1694691 - 1696079 1102 462 aa, chain + ## HITS:1 COG:trkG KEGG:ns NR:ns ## COG: trkG COG0168 # Protein_GI_number: 16129324 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Escherichia coli K12 # 1 462 24 485 485 619 70.0 1e-177 MLPPMVIALLNKERTYFAFLTTFITFFSLGGLIWRATRHAGIQLRTRDGFVIIVLFWLLF SIISAMPLWMDDGLHLSFADALFEGVSGITTTGATVIGDVSALPKSYLYYRAQLNFIGGL GVIVLAVAVLPLLGIGGMKLYQSEMPGPFKEERLTPRLADTARTLWMTYLALGLICTLAY WLAGMSFFDAVCHGLSTVSLGGFSTRSESIGFYDSHAIELVAGAFSLLSAINFTLWYVAI VRRTLKPLRRSPEVKFFLTTAFVIILITAWQVWHAGMYNVTDSLVHAFFLASSMMTDNGL STGDYAQWPAHTIFLLLSASFFGGCVGSTCGGIKALRFLIMSKQSVQELNQLAHPRALLS IKVGKSVVNERVLRSVWSFFFLYVTITGLFVWMLNLMGYDLFTSFATVAACINNMGLGFG ETASTFGTLTEGAKLLMCAAMILGRLEIYPVLILFSRFFWRA >gi|333596725|gb|GL892087.1| GENE 1538 1696114 - 1697526 1477 470 aa, chain - ## HITS:1 COG:STM3172 KEGG:ns NR:ns ## COG: STM3172 COG2132 # Protein_GI_number: 16766472 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Salmonella typhimurium LT2 # 1 469 1 469 470 866 91.0 0 MSLSRRQFIQASGIALCAGAMPRTASAAGQQEPLPIPPLIESRRGQPLFLTLQRSHWSFT QGTRAQVWGINGRYLGPTIRVWNGDDVKLIYSNRTTENVAMTVSGLQVPGPLIGGAARMM SPNADWAPVLPIRQSAATLWYHANTPNRTAQQVYNGLAGMWLIEDEVSKTLPIPNHYGVD DFPIIIQDKRLDNFGTPEYSEPGSGGFVGDTLLVNGAQSPYVEVSRGWVRLRLLNASNSR RYQLQMSDGRALHVISGDQGLLPAPVPVKQLALAPGERREILVDMTNGDEVSVTCGEAAS IVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPQEIVTGPAVRSRDISLGD DPGINGALWDVNRIDITAQQGTWERWTVRSEMPQSFHIEGVSFLIRNVNGAMPFPEDRGW KDTVWVDGQVELLVYYGQPSWPHFPFLFHSQTLEMMDRGSVGQMLVNPAP >gi|333596725|gb|GL892087.1| GENE 1539 1697588 - 1698325 804 245 aa, chain - ## HITS:1 COG:ECs3902 KEGG:ns NR:ns ## COG: ECs3902 COG0204 # Protein_GI_number: 15833156 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 465 89.0 1e-131 MLYIVRLILTVIYCILVCIFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVEKRLPEG AENFGNAIYIANHQNNYDMVTASNIVLPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN RAKAHGTIAEVVDQFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS NTSNKINLNRLNNGLVIVEMLPPVDTSKYGKDQVRELATHCRELMAQHIAQLDKEVAERE AAGKI >gi|333596725|gb|GL892087.1| GENE 1540 1698488 - 1700746 3238 752 aa, chain - ## HITS:1 COG:STM3174 KEGG:ns NR:ns ## COG: STM3174 COG0188 # Protein_GI_number: 16766474 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Salmonella typhimurium LT2 # 1 752 1 752 752 1395 93.0 0 MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNATAKF KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY TESRLSKYAEVLLGELGQGTVDWVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATDI PPHNLREVAKAAITLIEQPKTSLDELLDIVQGPDYPTEAEIITSRAEIRKIYQNGRGSVR MRAVWTKEDGAVVITALPHQVSGAKVLEQIASQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMEQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILTEWLAFRRDTVRR RLNHRLEKVLKRLHILEGLLVAFLNIDEVIEIIRTEDEPKPALMSRFGISETQAEAILEL KLRHLARLEEMKIRGEQNELEKERDQLQAILASERKMNTLLKKELQADADAFGDDRRSPL HEREEAKAMNEHDMLPSEPVTIVLSQSGWVRSAKGHDIDAPGLSYKSGDSFKAAVKGKSN QPVAFIDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMEADDQKLLMASDA GYGFICTFNDLVSRNRAGKALISLPDNAHVMPPLIIENESDMLLAITAAGRMLMFPVSDL PELSKGKGNKIINIPSAEAAKGEDSLAHLFLLPPQSTLTIHVGKRKIKLRPEELQKVVGE RGRRGSLMRGLQRIDRVEIDSPTRSKADDSEE >gi|333596725|gb|GL892087.1| GENE 1541 1700865 - 1701266 547 133 aa, chain - ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 132 1 129 130 164 63.0 5e-41 MKKFAAIAAIMMMTTAPVFAAQGGFSGPSATQNQTHTLQGGFVDNNANLTTAAKVKDMKD DSWVKLRGNITERLSDDRYTFRDESGTVVVEIDHKRWNGVTVTPQDKVELQGKIDKDWNE FEIDVKQVIKLNK >gi|333596725|gb|GL892087.1| GENE 1542 1701406 - 1702065 905 219 aa, chain + ## HITS:1 COG:STM3177 KEGG:ns NR:ns ## COG: STM3177 COG0745 # Protein_GI_number: 16766477 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 369 85.0 1e-102 MRILLVEDDKLIGDGIKAGLSKMGFNVDWFTDGKTGQAALYTAPYDAVVLDLTLPEIDGL AILRAWRESGKSEPVLILTARDALNQRVEGLRLGADDYLCKPFALIEVAARLEALVRRSH GQARSELRHGKVTLDPASLVATLEGETLVLKPKEFALLELLMRNAGRVLPRKTIEEKLYN WDDDVSSNAVEVHVHHLRRKLGSEFIRTVHGIGYTLGDA >gi|333596725|gb|GL892087.1| GENE 1543 1702062 - 1703399 1572 445 aa, chain + ## HITS:1 COG:ZygiY KEGG:ns NR:ns ## COG: ZygiY COG0642 # Protein_GI_number: 15803568 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 2 445 6 449 449 604 70.0 1e-173 MKLSLKLRLTLLFLLLSLAAWFAASVVAWHQTTDKLDKLFDTQQMLFAKRLLTMDVDELR APERMREVPKKAKHGHLDDDALAFAIFTADGSMVLNDGENGRDIPYHYRRDGFADGQLQD DNDEWRFLWLTSPDGKYRVVVGQEWEYRQDMALDVVSSQLTPWLVALPVMLLLLIVLLSR ELKPLKNLAQTLRSRSPDATDTLPTHGVPTEVRPLLDALNHLFARTQEMMARERRFTSDA AHELRSPLAALKVQTDVAQLSLDDPEAQSKALGQLHAGIDRASRLVDQLLTLSRLDSLDN LADVEPVMMADLLQSAVLDIWHPAQQAGIDIRLNVNAPEVMRHGQPLLLSLLGRNLLDNA VRYSPRGSVVDVTLNARSFTVRDNGPGISSDALARLGERFYRPPGQDATGSGLGLSIVKR IAALHGMRVSLRNAPEGGFEVTISW >gi|333596725|gb|GL892087.1| GENE 1544 1703504 - 1704085 792 193 aa, chain + ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 363 88.0 1e-100 MSNILIINGAKEFAHSKGQLNDTLTEVADGFLRDAGHDVKVVRADSNYDVKAEVQNFLWA DVVIWQMPGWWMGAPWTVKKYMDDVFTEGHGSLYASDGRTRSDASKKYGSGGLIQGKKYM LSLTWNAPLEAFTEQDQFFEGVGVDGAYLPFHKANQFLGMAPLPTFIVNDVIKMPDVPRY IAEYRKHLAEIFA >gi|333596725|gb|GL892087.1| GENE 1545 1704116 - 1704430 421 104 aa, chain + ## HITS:1 COG:ECs3911 KEGG:ns NR:ns ## COG: ECs3911 COG1359 # Protein_GI_number: 15833165 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 169 80.0 2e-42 MLTVIAEIRTRPGQHHRQAVLDEFAKIIPTVLKEEGCHGYAPMVDAATSASFQATAPDSI IMVEQWETVAHLEAHLQTAHMKAWSDAVKGDVLETHIRILEQGV >gi|333596725|gb|GL892087.1| GENE 1546 1704516 - 1704956 609 146 aa, chain + ## HITS:1 COG:STM2795 KEGG:ns NR:ns ## COG: STM2795 COG1652 # Protein_GI_number: 16766106 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Salmonella typhimurium LT2 # 1 145 1 148 149 180 66.0 6e-46 MGLFNFVKEAGEKLWDNLTDHKGQSDKITEHLKKLNIPGSDKVQVNVTDGKASVTGDGLT QEQKEKIQVAVGNIAGVSEVENNITATDAQDEATYYTVKSGDTLSAISKTVYGDANQYNK IFEANRPMLSSPDKIYPGQTLRIPKA >gi|333596725|gb|GL892087.1| GENE 1547 1704989 - 1706176 1462 395 aa, chain - ## HITS:1 COG:no KEGG:Ent638_3433 NR:ns ## KEGG: Ent638_3433 # Name: not_defined # Def: glycosy hydrolase family protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 395 1 395 395 749 92.0 0 MLSRIKEERLSAIAAPVDARAFSDELNSARSHVLDLISRHLTEFGDKFPAETCQDGFYPL TDNVEWTTSFWTGQLWLAWEMSGEAKFRAMAEKHVRSFGLRIAGRNDTNTHDLGFLYTLS CVAAWRLTGNREARGFSLLAAEALLERFHEKAKIIQAWGDLSDPEQAGRMIIDCNMNLPL LYWATEQTGDPRFADAAKAHVMQAATYLIRDDASTFHTYYMDVATGAPRYGNTQQGYADD SCWSRGQAWGIYGFLLSYIYTGDETMIALSKRLANYFLNRLPEDYVCHWDLALVGTDALR DSSSAAIAVCGLLELVKHLPVTDPDRERYLEWAKGIMSSLTKHYLMGKDEKGNGLLKHSV YHLASNKGVDECASWGDYFYVEALVRFTQSWKLYW >gi|333596725|gb|GL892087.1| GENE 1548 1706205 - 1707470 1447 421 aa, chain - ## HITS:1 COG:ECs0396 KEGG:ns NR:ns ## COG: ECs0396 COG0477 # Protein_GI_number: 15829650 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 35 402 32 402 417 229 37.0 7e-60 MKSTSTTNRTEYYKISSFIFLYFFTWSASIGLLAIWLGQKANLSGSVIGTVFAVNGIFSV ILKPIYGYILDKIGMSKYLLYFVVIMSALMAPFFIYVYQPLLMSNTLLGIIIGALYLSFA WYAGVAACESYSDRFSRLNGMEFGQIRMWGSLGWAVASSFSGLLFNLSPAYNFILGSVAS VVMLIVLLSLKVNTNSAHAGEVLTKEKIAPSDVYALLRNRKFWAFCLYVAGVAWMMFIAE QQFSRYFVTFFDDIHEGNAVFGYLGTVQSGMEFVMYMVVPLFVNFIGAKRGLLIVGLVVG ARLIISGMCDSHLLISVLKPLYGLEICLLLVSVFKYIAEHFDKRVNATMYLLGYQAMLYV GNVVVSSPAGYMYDRIGFEQTYIIMGATALTFTLISAFTLSACQSKWRGARALNVAETST R >gi|333596725|gb|GL892087.1| GENE 1549 1707502 - 1709316 1909 604 aa, chain - ## HITS:1 COG:SMb20536 KEGG:ns NR:ns ## COG: SMb20536 COG4289 # Protein_GI_number: 16264263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 3 573 7 577 617 437 41.0 1e-122 MWAANKEKSNPLSSRQDVVASLNALLQALDTQFPANRSRFSLGDTCAHYATDIAQMEGLS RALWGLFPLMASGESTLFSEKYLTAIKLGTDPQSSGYWGETGPYDQRLVEMAACGLGLAL LGDKLTARFSEREVMNLHAWLNQITDAQMPDSNWNYFAIMVQLGFKRAGLPYDQAAIDHR FALMDAYYLGDGWYSDGPGRPKDYYISMAFHFYGLIYATLSDDEARAKVLRERSRLFAED FIYWSAADGASVPFGRSLTYRFAMVAFWSAVAFSQLDVFTPGIVKGIVLRHLRGWQQQPI VDRDGILTLGFAYPNLAMCEDYNSPGSPYWALKTYLILALPEAHPFWQAEEQPLPALAEK HVIPHAQQILMHSKDSQHVVMLTAGQLELNNYVNTEAKYTKFAYSSRFGFTIERGRFGLK HAACDSMLLLAGGDDYFRGRRECEEVRVDENYIFSRWSPWRDVQIATWQIPFGEWHLRLH RINSARTLQTVEGGFAVMKTDHQVRDRGCYLMAENGSSVIVDLSPAIRRQPDSIVTPPNS SIMFAECASIPLLKADLPQGESWLCCAVLAGANQPAAATPQLNITYNQVVISEPGSERKL SFTL >gi|333596725|gb|GL892087.1| GENE 1550 1709483 - 1710319 870 278 aa, chain + ## HITS:1 COG:lin2118 KEGG:ns NR:ns ## COG: lin2118 COG4753 # Protein_GI_number: 16801184 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Listeria innocua # 175 276 392 493 494 74 37.0 2e-13 MHDTPTSDLLELITLNDTVASFSRLFANTVRYHHWHQCLEILYVEEGFGVAIVDNRHYTM RPGRLFFFPPFTLHKVMVDEQAEAIYRRTIIHLDQHAVLKILRDFPQTRQRLERLSRRGG EAWVADLAHCHHHIDHLFSCYKPPMNGESIASLLIGLFAMLPDDRDGEPGNSQGIASQVM FWLDEHYQEKFRLDALAADLGKSRSYVSRKFHAETGEKIHDYLNTLRLRKACEWLLHSEA SVREIASRAGFSDVTWFISAFKKGIGETPLQYRKNHSS >gi|333596725|gb|GL892087.1| GENE 1551 1710438 - 1712330 2429 630 aa, chain - ## HITS:1 COG:parE KEGG:ns NR:ns ## COG: parE COG0187 # Protein_GI_number: 16130926 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli K12 # 1 629 1 629 630 1253 96.0 0 MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILH ADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVN ALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDESFFDSPRFS VSRLTHLLKAKAVLCPGVEITFKDHVNNTEQSWRYEKGLNDYLCEAVNGLPTLPEKPFVG NFEGDTEAVDWALLWLPEGGELLTESYVNLIPTLLGGTHVNGLRQGLLDAMREFCEYRNI LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFTLWLNQ NVQAAEMLAEMAISSAQRRLRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGD SAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQL RYGKICILADADSDGLHIATLLCALFVKHFRALVKNGHVHVALPPLYRIDLGKEVYYALT EEEKAGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTISDEDEQQTN AVMDMLLAKKRSEDRRNWLQEKGDMADIEA >gi|333596725|gb|GL892087.1| GENE 1552 1712359 - 1712940 516 193 aa, chain - ## HITS:1 COG:STM3182 KEGG:ns NR:ns ## COG: STM3182 COG3150 # Protein_GI_number: 16766482 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Salmonella typhimurium LT2 # 1 192 1 192 193 355 88.0 4e-98 MSTLLYLHGFNSSPRSAKATQFRQWLSAHHPHVEMIIPQLPPYPADAAEMLESIVLEHGG ESFGVVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLRDFLGENENPYTGQQYVLESR HIYDLKVMQVDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVEEGGNHAFTGFEDH FTQIVDFLGLHSH >gi|333596725|gb|GL892087.1| GENE 1553 1712940 - 1713767 535 275 aa, chain - ## HITS:1 COG:ECs3920 KEGG:ns NR:ns ## COG: ECs3920 COG1409 # Protein_GI_number: 15833174 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 439 83.0 1e-123 MESLLNLTVAGGAPVRILQITDTHLFAEKHETLLGVNTWESYQAVLDAIHAEKRPCDLIV ATGDLAQDQSSAAYQHFAEGIASFSVPCVWLPGNHDFQPAMYSSLQDAGISPAKCVFAGD QWQILLLDSQVFGVPHGELSDYQLDWLETKLAAEPNRNTLLLLHHHPLPAGCSWLDQHSL RNSAALDGVLAKFPLVQNLLCGHIHQEQDLDWNGRRLLATPSTCVQFKPHCANFTLDTIA PGWRWLELHADGSLTTEVCRLAGAQFRPDTASEGY >gi|333596725|gb|GL892087.1| GENE 1554 1713795 - 1714217 159 140 aa, chain - ## HITS:1 COG:ECs3921 KEGG:ns NR:ns ## COG: ECs3921 COG3151 # Protein_GI_number: 15833175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 139 1 139 140 264 95.0 3e-71 MKRYTPDFPEMMRLCETNFAQLRRLLPRNDAPGETVSYQVSNAQYRLTITESTRYTTLVE IEQTAPSISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ FLADWLRYCLAHGAMAIPVC >gi|333596725|gb|GL892087.1| GENE 1555 1714214 - 1714846 519 210 aa, chain - ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 208 1 208 209 362 87.0 1e-100 MQKPENVPVTFAKNDVEIIARETLYSGFFSMELYRFRHRLFNGEMSGEIKREIFERGHAA VLLPYDPVRDEVVLVEQVRIAAYETSETPWLLEMVAGMIEEGESVEDVGRREALEEAGLV VGRTKPVLSYLASPGGTTERSSIMVGEVDATTAEGIHGLADENEDIRVHVVSREQAYQWV EEGKIDNAASVIALQWLQLHYQTLRHEWKK >gi|333596725|gb|GL892087.1| GENE 1556 1715050 - 1716528 1806 492 aa, chain + ## HITS:1 COG:STM3186 KEGG:ns NR:ns ## COG: STM3186 COG1538 # Protein_GI_number: 16766486 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 492 3 491 491 711 85.0 0 MKKLLPILIGLSLTGFSAMSQAENLLQVYQQARLGNPDLRKSAADRDAAFEKINEARSPL LPQLGLGADYTYTNGFRDNNGIDSNATSASLQLTQTLFDMSKWRELSLQEKSAGIQDVTY QTDQQTLILNTATAYFNVLSAIDALSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR SQYDTVLANEVTARNNLDNALEALRQVTGNYYPELASLNVDSFKTDKPQAVNALLKEAEN RNLTLLQARLSQDLAREQIRLAQDGHLPTLSLSASTGVSDTSYSGSKTTSQAYDDSNIGQ NKVGLSFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRNVVQTVRSSFNNVNASISSI NAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYQYLINQLNIK QALGTLNEQDLQMLNSTLGKPVSTSPDSVAPENPQQDAAVDNFTANSSAPVAQPAAARST APASSGTNPFRQ >gi|333596725|gb|GL892087.1| GENE 1557 1716741 - 1717388 603 215 aa, chain + ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 215 18 234 234 309 88.0 2e-84 MNHASFRKSWNARHLTPVALAVTAVFMLAGCEQSDETVSLYQNADDCASATGKAAECTTA YNNALKEAERTAPKYASREDCVAEFGEGQCQQAPAQAGMAPENQAQAQSSGSFWMPLMAG YMMGRLMSGGAGYQQQPLFSSKNPNSPAYGKYTDATGKGYGAATPGRTMTVPKTAMAPKP ATTSTITRGGFGESVAKQTTMQRSATGSSTRSMGG >gi|333596725|gb|GL892087.1| GENE 1558 1717391 - 1718551 1344 386 aa, chain + ## HITS:1 COG:STM3188 KEGG:ns NR:ns ## COG: STM3188 COG0754 # Protein_GI_number: 16766488 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Salmonella typhimurium LT2 # 1 386 1 386 387 743 92.0 0 MERVSIVERPDWREKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL KVVEKVIDSDELMTKFRIPKHTWSFVRQSWKTNQPSLYSRLDLAWDGVGEPKLLENNADT PTSLYEAAFFQWIWLEDQANAGNLPEGSDQFNSLQEKLIERFAELREQHGFNLLHLACCR DTEEDRGTVQYLQDCAAEAEVATEFLYIEDIGLGEKGQFTDMQDQVISNLFKLYPWEYML REMFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLPAYFAEDDFPPMEKYV VKPIFSREGANVSIIENGKTLEAVEGPYGEEGMIVQAFYQLPKFGDSYTLIGSWLINDQP AGIGIREDRALITQDLSRFYPHIFVE >gi|333596725|gb|GL892087.1| GENE 1559 1718634 - 1719422 925 262 aa, chain - ## HITS:1 COG:STM3189 KEGG:ns NR:ns ## COG: STM3189 COG3384 # Protein_GI_number: 16766489 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 262 15 276 276 478 88.0 1e-135 MSSSRMPALFLGHGSPMNVLEDNVYTRAWRQLGESLPRPKAIVVVSAHWFTRGTGVTAME TPKTIHDFGGFPQALYDTHYPAPGSPELAQRLVDLLAPVPVALDKEAWGFDHGSWGVLIK MYPEADIPMVQLSVDSTKPAAWHMEMGRKLATLRDEGIMLIASGNVVHNLRTVRWHGENT PYPWATAFNDYVKDNLTWQGPVEQHPLVNYLDHEGGSLSNPTPEHFLPLLYVLGAWDGQE PVTIPIDGIEMGSLSMLSVQVG >gi|333596725|gb|GL892087.1| GENE 1560 1719553 - 1720326 904 257 aa, chain + ## HITS:1 COG:STM3190 KEGG:ns NR:ns ## COG: STM3190 COG0428 # Protein_GI_number: 16766490 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 377 92.0 1e-104 MSVPLILTLLAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALHTE GMSPVLGYGMFIIGLLGYFALDRTLPHAHPQDLMQKSVTPIPGNIKRTAILLTLGISLHN FPEGIATYVTASSNLEMGFGVALAVALHNIPEGLAVAGPVYAATGSKRTAVFWAGISGMA EILGGVLAWLILGSLVSPIVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCG MSVMGMSLVLLQTAGIG >gi|333596725|gb|GL892087.1| GENE 1561 1720647 - 1721207 559 186 aa, chain + ## HITS:1 COG:ybgD KEGG:ns NR:ns ## COG: ybgD COG3539 # Protein_GI_number: 16128694 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 186 1 188 188 136 46.0 2e-32 MYMGKKVLLAVAMAAIVSGSAFAEEQGSGKITFKGVVIDAPCSIAPDSVDKEIDLGEVTT AVINANKKSTPVPVEINLENCQLDDPKDETDTPVSKVDVTFTSAATDATDTNLMTNTYAN GAQNVGVRLLDNAETNLPLGAGQTIDLLAGSTTQTLHFKAVMEVLTGKTATAGQVEATAN YVLMYK >gi|333596725|gb|GL892087.1| GENE 1562 1721186 - 1721311 97 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITQCNLYAIILLLEKEAEPTGMNCQPVESVMQRNYLYIRT >gi|333596725|gb|GL892087.1| GENE 1563 1721280 - 1723721 2090 813 aa, chain + ## HITS:1 COG:ybgQ KEGG:ns NR:ns ## COG: ybgQ COG3188 # Protein_GI_number: 16128693 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 21 813 22 818 818 872 56.0 0 MMAYKLHWVIIIASLLMTRIASATEFNINAIDKDQRNSVDLSFFKDHISVIPGNYFVTVA INDIPLANGWQLRWREINNTVQVCIPPELADTFALQDDVRHALPEKEGCVDFAARPDIKF TFEQASQTLKVTVPQAWLQYRAADWMPPATWDHGVPGVLLDYNLFASHYQPDSGESNNNV NTYGTAGVNMGSWRLRSDYQYTQSYTEAGSDHDGRFSRLYMFRPLPALGAKLTLGETDFQ SAIFDAFTYTGASLISDERMLPWSLRGYAPQITGIAQTNATVTVSLADRVIYQSKVPPGP FVIQDLNQSVQGTLDVKVTEEDGRVSTYQVSAESVPFLTRKGQVRYKLAAGKARKDASHD VEDNAFLSGEFSWGMLSHTSLYGGMLADGDHYRSVATGIGQNMAYLGALSFDVTQATSQL PGRSSQTGYSYRFNYSKRFDTTGSQLTLASYRYSDPQFLSYARYLDDDDRQAEKQTLSVT ASQYLPALSLNLYVNILRQTWWNASPSTTGSVTAGYNFDVGRWKNLGVTLSWSKTHYEED DDSDDTQLYLTLSVPLDPDHRLSYDMRNSDTLSHNVSWYDTSDRNNTWGVSAGAESGKPN SAAQVSGNYQHYSAFGDLNLSGSYKAEEYHSLSASWNGSFTSTVKGAALHRRSYGNEPRV MVSTDGVGNIPLNLSRDETNRFGIGVLPSFSSYSPATVQVNMNNLPDGVDVDNRVVTSTW TEGAIGYRQIATRAGKDVAGVLRMPSGTPPLGAIVRLEESDLQVGMVADEGHVWLGAVEP EQQFRVTWGDNQQCRFSLPSHLENSMQLILPCQ >gi|333596725|gb|GL892087.1| GENE 1564 1723731 - 1724492 699 253 aa, chain + ## HITS:1 COG:ybgP KEGG:ns NR:ns ## COG: ybgP COG3121 # Protein_GI_number: 16128692 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 3 245 1 242 242 268 51.0 1e-71 MKLTPFKSLCLVLISTVFTAHAAINLDRTRIIFSESDKATSLKVDNQSKALPYLALSWIE DEKGQKEDTHFMALPPIQRIEAGSSSQVRIVKQAATRQLPKDRESLFYFNLREVPPKSAS ASEERSVMQVAMQSRIKLLWRPKAITKKPGEQAEMRLEISANASGLTLHNPTPYYITLAW LSKDAKTMLPGFDSLMLAPFATATTSTGDYHGNYYSIGYIDDYGALKKFDVQCAGTAQCA LTERKIENDAKSH >gi|333596725|gb|GL892087.1| GENE 1565 1724476 - 1725537 946 353 aa, chain + ## HITS:1 COG:no KEGG:ECL_04375 NR:ns ## KEGG: ECL_04375 # Name: not_defined # Def: putative fimbrial protein # Organism: E.cloacae # Pathway: not_defined # 1 353 1 352 352 555 74.0 1e-157 MRNLTNLLFILLLTVLPLKEALALDCYLGGAGGPVEKTETISPFAIPSNAQPGEKIWESN DIKIPVTCDHNVTSGFEPEDVFAWVNPYPSATDPYYELGVTYEGIDYDATGQPNGVDTRQ CLDNKNITIYTPAQIHQMGWENLICSGNPEDIHTSRTFVARLRLYVRIKAMPPHGYVSSL SDYIVVQFDGKGGVNQMADAKNLKYHITGLQNITVLDCGATFSIFPENQEIDFGTFSARD IVNQQKRIRTFSIRTTKVQDAQCSDGFKMDSSFYTTETLSADDTALLIGNGLKLRILNGT EPYTFNQYKEYADFTGEKLNVEQNYTAELSREEGKAIQSGPFETVVLFKINYH >gi|333596725|gb|GL892087.1| GENE 1566 1725583 - 1726236 705 217 aa, chain - ## HITS:1 COG:STM3195 KEGG:ns NR:ns ## COG: STM3195 COG0108 # Protein_GI_number: 16766495 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Salmonella typhimurium LT2 # 1 217 1 217 217 371 89.0 1e-103 MNQTLLSSFGTSTQRVEHALDALREGRGVMVLDDENRENEGDMIFAAENMTVEQMALTIR HGSGIVCLCITEERRQQLDLPMMVENNTSAFGTGFTVTIEAAHGVTTGVSAADRLTTVRA AIADGAKPSDLHRPGHVFPLRAQPGGVLTRGGHTEATIDLVTLAGFKPAGVLCELTNDDG TMARAPECITFARLHNMPVVTIDDLVEYRQAHERKAS >gi|333596725|gb|GL892087.1| GENE 1567 1726613 - 1726909 509 98 aa, chain + ## HITS:1 COG:STM3196 KEGG:ns NR:ns ## COG: STM3196 COG2960 # Protein_GI_number: 16766496 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 97 21 117 119 132 91.0 1e-31 MIDPKKIEQIARQVHESMPKGIREFGDDVEKKIRQTLQAQLVRLDLVSREEFDVQTQVLL RTREKLALLEQRLSELESRNAPEEVKPAPAIPPVDDQA >gi|333596725|gb|GL892087.1| GENE 1568 1726987 - 1728417 1896 476 aa, chain - ## HITS:1 COG:rfaE KEGG:ns NR:ns ## COG: rfaE COG2870 # Protein_GI_number: 16130948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Escherichia coli K12 # 1 473 1 473 477 873 94.0 0 MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVDTIEERPGGAANVAMNI ASLGAHSRLVGLTGIDDAARALSQSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFEGVDPEPLHERISQALGNIGALVLSDYAKGALASVQTMIQLARKASVPVLIDPKG TDFERYRGATLLTPNLSEFEAVAGKCKTEEELVERGMKIIADFELSALLVTRSEQGMTLL QPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACYFANAAAGVVVGKLGT STVSPIELENAVRGRADTGFGVMTEDELKVAVAAARKRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGETRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRL IAGILPDLLVKGGDYKPEQIAGSEEVWANGGEVMVLNFEDGCSTTNIIKKIQKVSQ >gi|333596725|gb|GL892087.1| GENE 1569 1728458 - 1731313 3589 951 aa, chain - ## HITS:1 COG:glnE KEGG:ns NR:ns ## COG: glnE COG1391 # Protein_GI_number: 16130949 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Escherichia coli K12 # 2 944 3 945 946 1571 85.0 0 MPLSSQLQQHWQTVCERLPESLPASSLSEQAKSVLIFSDFVQESVSAHPDWLTALESAPP QAEEWRHYAGWLHTALEAVADEPTLMRVLRQFRRRVMVRIAWAQALELVSEESTLQQLSE LAQTLIVAARDWLYAACCKEWGTPCSEDGVPQPLLILGMGKLGGCELNFSSDIDLIFAWP ENGSTRGGRRELDNAQFFTRLGQRLIKALDQPTQDGFVYRVDMRLRPFGDSGPLVLSFAA LEDYYQEQGRDWERYAMVKARIMGDSDDAYANELRAMLRPFVFRRYIDFSVIQSLRNMKG MIAREVRRRGLKDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLLPTLSAIDQLHL LPEGDAQTLRESYLFLRRLENLLQSINDEQTQTLPGDELNRARLAWGMHVDDWAALTERL EAHMAGVRRIFNDLIGDDESESQDDALSEHWRELWQDALQEDDTTPVLAHLSDDARHRVV ALIADFRLELNKRAIGPRGRQVLDQLMPHLLSDVCSREDAPVPLSRMMPLLSGIVTRTTY LELLSEFPGALKHLISLCAASPMVANKLARYPLLLDELLDPNTLYQPTATDAYRDELRQY LLRVPEEDEEQQLEALRQFKQAQMLRVAAADIAGTLPVMKVSDHLTWLAEAIIDAVVHQA WVQMVARYGQPKHLADREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPADVMTDGERE IDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSTEAFADYQKNEAWT WEHQALVRARVVYGDPQLKTQFDAIRKAVMTTPREGSTLQTEVREMREKMRAHLGNKHRD RFDIKADEGGITDIEFITQYLVLLHAHDKPKLTRWSDNVRILELLAQNDIMDEQEAQALT RAYTTLRDELHHLALQEQPGHVALDCFTDERAQVTTSWQKWLVEPCVTKQV >gi|333596725|gb|GL892087.1| GENE 1570 1731335 - 1732636 1521 433 aa, chain - ## HITS:1 COG:STM3202 KEGG:ns NR:ns ## COG: STM3202 COG3025 # Protein_GI_number: 16766502 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 433 1 433 433 627 72.0 1e-179 MAQEIELKFIVEKDSADALRQHLNTLSGEHHEPVQLLNIYYETPDNWLRNHDMGLRIRGA NGRYEMTMKIAGRVVGGLHQRPEYNIDISKPELELDRFPAEVWPEGTLPATLSAEAQPLF STDFWREKWLVTEGKSRIEIAFDRGEIKAGDEQEPICELELELLEGEASDVLKLARKLVN QPGLRQGSLSKAARGYHLAAGNAPRVLRETPILRVVPKASVEQGMEAALELALSQWQYHE ELWARNVKNAKKQVLAAMGLVRHTLALFGGIVPRKASAHLRDLLTQTETLMLSDVSAQTA IYSPQNASAKLALTEFLVTRGWRTFLDAKGQTKIAENFKRFADIHLSRHAAELRTTFAHP LGDQYGDQLPRLARNIDSMLLLSGAYEGVKAQAWLENWQGLQHAIETRQQIEIEHFRNEA ISQDPYWLHSGKR >gi|333596725|gb|GL892087.1| GENE 1571 1732874 - 1733494 833 206 aa, chain + ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 313 87.0 2e-85 MLKLRLIGLTLLAFSAATAVHAEEKRYVSDELNTWVRSGPGDNYRLVGTVNAGEEVTLLQ TNADTNYGQVRDSSGRTSWIPLKELSTVPSLRTRVPDLENQVKTLTDKLNNIDGTWNQRT AEMQQKVAQSDSVIAGLKDENQKLKNELIVAQKKVNAANLQLDDKQRTIIMQWFMYGGGV LGVGLVLGLVLPHLIPSRKRKDRWMN >gi|333596725|gb|GL892087.1| GENE 1572 1733555 - 1734796 1255 413 aa, chain + ## HITS:1 COG:STM3204 KEGG:ns NR:ns ## COG: STM3204 COG0617 # Protein_GI_number: 16766504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Salmonella typhimurium LT2 # 1 411 1 411 413 744 88.0 0 MKSYLVGGAVRDALLGLPVKDKDWVVVGATPEAMIDAGYQQVGRDFPVFLHPKSREEYAL ARTERKSGSGYTGFTCYAAPDVTLEQDLLRRDLTINALAQDENGHIIDAYGGQNDLRDRL LRHISPAFSEDPLRVLRVARFAARYAHLSFRIADETMALMTAMTDAGELEHLTPERVWKE TENALTTRNPQVFFQVLRDCGALKVLFPEIDALFGVPAPAKWHPEIDTGVHTLMTLSMAA MLSPEVDVRFSTLCHDLGKGLTPKELWPRHHGHGPAGVKLVEGLCQRLRVPNDIRDLAKL VAEFHDLIHTFPILKPATIVKLFDNIDAWRKPQRVEQIALTSEADVRGRTGFEASDYPQG RLLREAWDVAKAVPTKDVVEAGFKGPAIREELTKRRIDAVAVWKEKRCPQPKE >gi|333596725|gb|GL892087.1| GENE 1573 1734810 - 1735631 1223 273 aa, chain - ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 451 95.0 1e-127 MSDMHSLLVAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAV VVMFWRRLFGLIGIHFGRLPQREGESKGRLTLIHILLGMIPAVVLGLVFHDTIKSLFNPI NVMYALVVGGFLLIAAEVLKPKTPRAEGLDDMTYRQAFMIGCFQCLALWPGFSRSGATIS GGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSIDFLTVGDIPMFAVGFITAFIVALI AIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF >gi|333596725|gb|GL892087.1| GENE 1574 1735738 - 1736106 499 122 aa, chain - ## HITS:1 COG:STM3206 KEGG:ns NR:ns ## COG: STM3206 COG1539 # Protein_GI_number: 16766506 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Salmonella typhimurium LT2 # 1 119 2 120 120 209 91.0 8e-55 MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMGWDNRKSAKSDDVNDCLSYADISETV IGHVEGQRFALVERVAEEVAELLLNKFNSPWVRIKLSKPGAVARAANVGVIIERGTNLKG KI >gi|333596725|gb|GL892087.1| GENE 1575 1736214 - 1736828 624 204 aa, chain + ## HITS:1 COG:STM3207 KEGG:ns NR:ns ## COG: STM3207 COG0344 # Protein_GI_number: 16766507 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 202 1 202 203 364 95.0 1e-101 MSAIAPGMIILAYLCGSISSAILVCRIAGLPDPRESGSGNPGATNVLRIGGKGAAVAVLI FDVLKGMLPVWGAYALGVTPFWLGLIAIAACVGHIWPVFFGFKGGKGVATAFGAIAPIGW DLTGVMAGTWLLTILLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDN IQRLWRRQETKIWTKLKRKKKEPE >gi|333596725|gb|GL892087.1| GENE 1576 1736940 - 1737767 651 275 aa, chain + ## HITS:1 COG:ECs1321 KEGG:ns NR:ns ## COG: ECs1321 COG0829 # Protein_GI_number: 15830575 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Escherichia coli O157:H7 # 1 248 1 247 247 321 65.0 1e-87 MLAIQVTDNSYKGWQASLALQFCHTPEKTRLHAARHTGPLTVQRPFYPEGETCHLYLLHP PGGIVGGDTLDISVRLDAKSHALITMPGASKFYRSSGPQARLSQHFYLDEDATLEWLPQD TILFPGANAALRSVFHLKASSTLLAWELYCLGRPVINETFTHGTLESRLEVWVDDEPRLI ERLHLSDGDLTPVAGKPWIGTLLFYPATDVHLEAVRALLAPLEHYAGATLTDDLLSVRFL SHDNLICQRVMRDIWQSLRPLLTTKTACSPRIWQT >gi|333596725|gb|GL892087.1| GENE 1577 1737778 - 1738080 317 100 aa, chain + ## HITS:1 COG:ECs1322 KEGG:ns NR:ns ## COG: ECs1322 COG0831 # Protein_GI_number: 15830576 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 152 90.0 2e-37 MELTPREKDKLLLFTAALVAERRLARGVKLNYPESVALISAFIMEGARDGETVASLMEAG RHVLRRDQVMEGVPEMIPDIQVEATFPDGSKLVTVHNPIV >gi|333596725|gb|GL892087.1| GENE 1578 1738091 - 1738405 318 104 aa, chain + ## HITS:1 COG:ECs1323 KEGG:ns NR:ns ## COG: ECs1323 COG0832 # Protein_GI_number: 15830577 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Escherichia coli O157:H7 # 1 102 1 102 106 154 72.0 4e-38 MIPGEYQIQPGTIAINVGRETRSVIVENHGDRPIQVGSHYHFYEVNPALKFDREGTKGYR LNIPAGTAVRFEPGQKREVTLVQVTGAQRIFGFRGEVMGEVKHG >gi|333596725|gb|GL892087.1| GENE 1579 1738398 - 1740101 1990 567 aa, chain + ## HITS:1 COG:ECs1324 KEGG:ns NR:ns ## COG: ECs1324 COG0804 # Protein_GI_number: 15830578 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Escherichia coli O157:H7 # 1 567 2 568 568 1018 87.0 0 MAEISRQAYADMFGPTTGDKVRLADSELWIEVEDDLTIYGEEVKFGGGKVIRDGMGQGQM TAEECVDLVLTNALIVDHWGIVKADIGVRNGRIFAVGKAGNPDIQPGVTIPIGAATEVIA AEGKIVTAGGIDTHIHWICPQQAEEALVSGVTTMIGGGTGPAAGTNATTCTPGPWYIARM LQAADTLPVNIGLLGKGNGSNPDALREQIAAGAIGLKIHEDWGATPAAINCSLEVAEEMD IQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNP TLPYTVNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETIAAEDVLHDIGAFSLTSSD SQAMGRVGEVIIRTWQVAHRMKVQRGALPEETGENDNFRVKRYVAKYTINPALTHGIAHE VGSIEAGKLADLVVWSPAFFGVKPATIVKGGMIACAPMGDINASIPTPQPVHYRPMFGAL GAARHATRLTFVSQAAHASGIPQQLNLQSATAVVRGCRTVKKADMIHNDLQPNITVDSQT YEVRVDGELITSEPAEVLPMAQRYFLF >gi|333596725|gb|GL892087.1| GENE 1580 1740111 - 1740575 573 154 aa, chain + ## HITS:1 COG:ECs1325 KEGG:ns NR:ns ## COG: ECs1325 COG2371 # Protein_GI_number: 15830579 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 203 72.0 1e-52 MICLTQRLDHAHPITASVTLPIDVRVKSRARVALNDGREAGLMLPRGLLLRGGDLLTTDD GSEVIEVIAAPESVSVVRCADPFLLARACYHLGNRHVPLQIMPGELRYHHDHVLDDMLRQ FGLEVAFASLPFEPEAGAYTSDAHSHSHSHAHSH >gi|333596725|gb|GL892087.1| GENE 1581 1740585 - 1741124 735 179 aa, chain + ## HITS:1 COG:aq_666 KEGG:ns NR:ns ## COG: aq_666 COG2370 # Protein_GI_number: 15606080 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase/urease accessory protein # Organism: Aquifex aeolicus # 1 156 1 162 180 65 36.0 5e-11 MRKYLPLLLLAFSVPALAHPGHGTDSFQAGFLHPLTGLDHLLMLTGAGVLSALSGRKLLL PLATLGMMLAGAIAGSLLGGFSGMEMLIIASLAVCGVMMFKTENRLLLAVPALAMFHGWA HGVEMSGHSFWLFTSGFMLASATVLCASFAAGRLLRRHDGLRKTFGGGLIASALLALIA >gi|333596725|gb|GL892087.1| GENE 1582 1741154 - 1741798 625 214 aa, chain + ## HITS:1 COG:ECs1326 KEGG:ns NR:ns ## COG: ECs1326 COG0830 # Protein_GI_number: 15830580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Escherichia coli O157:H7 # 1 214 11 224 224 290 72.0 9e-79 MQLSSSSLPVGSFTWSQGLEWAVEAGWITDADAFKRWQIQQMEQSFFCVDLPLFIRLFRA CEQQDLATAKRWTAYLLACRETRELREEERNRGAAFTRLITSWEPDCPPEWLPLFMQSQL SGMAWLGVRWGISARELALSLGYSWIESAVMAGVKLVPFGQQAAQQLIIDLSDHYAAGFE QAFLRGDDALGAATPLSAIASARHETQYSRLFRS >gi|333596725|gb|GL892087.1| GENE 1583 1741808 - 1742425 914 205 aa, chain + ## HITS:1 COG:ECs1327 KEGG:ns NR:ns ## COG: ECs1327 COG0378 # Protein_GI_number: 15830581 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli O157:H7 # 5 203 5 203 205 340 92.0 8e-94 MADYKHPLRVGVGGPVGSGKTALLEALCKAMRDTYHLAVVTNDIYTKEDQRILTEAGALE PERIVGVETGGCPHTAIREDASMNLAAVEALSEKFGNLDLIFVESGGDNLSATFSPELAD LTIYVIDVAEGEKIPRKGGPGITKSDFLVINKTDLAPYVGASLEVMERDTNRMRGERPWT FTNLKAGDGLATIIAFLEEKGMLRI >gi|333596725|gb|GL892087.1| GENE 1584 1742459 - 1744489 1282 676 aa, chain - ## HITS:1 COG:no KEGG:ECL_04394 NR:ns ## KEGG: ECL_04394 # Name: not_defined # Def: serine protease # Organism: E.cloacae # Pathway: not_defined # 1 676 1 664 664 1078 86.0 0 MKKSALSLFICAAISFSAAAEYSVQNELAQDNATYNAIVVKLKPTTGLLKATNNKITLSD TSLTPTNMFRPTNLRSSAQSSELTELNKRYGFDRYLRIALPKEKSQDKTYINHIITELEQ NQNVELVYPEAEPVSLDVTALASSLKSSVNGNLTAAAAPDFRNKQDYLKAPDVKRTGYYM GGVNRESVDHYAGSAGEGVTIISTEIYPWNSNHINLPPISLSSGKTTYIDKQDHDTASVG IMAAKDIGTGIRGISWKSRLGYSASAHNNLYNLIPQLNAGDVVQIGIHVAGGYPAGCTKD CWIAMESEPAYYDVIKALTDKGIYVIEAAGNGNVNLDSPGFRGAFDVNVRDSGAILAGAF CAKDGKKASFSTYGSRVTSAAWGCWDVVTTGYGDLYKNAGANDFYTSTFGGTSSANPIIA GVVASLSGIAKANGITVTPRQMRQILAETGTPLANGDSAKVGTQPDMERAVARILALKDG GTPAAPAPTAVAGADHTMVSPTTGVSTYPLDGSKSLNAKSYNWSVTKGAETFSLEATLNG TLVKSVDSAHAYAVIPANSEGEATFTLTTTGADGRTATDSMTINVSKPAVPATDDTPAKD DTPTTDDTPATDDTPVNPAAPAYKAKIAYPIQCTKVSYNGKVWFNQWYVNPGQETPGTGG QWGAWREQGAANNSCK >gi|333596725|gb|GL892087.1| GENE 1585 1744839 - 1745519 482 226 aa, chain + ## HITS:1 COG:mll4697 KEGG:ns NR:ns ## COG: mll4697 COG2197 # Protein_GI_number: 13473938 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Mesorhizobium loti # 3 221 6 212 215 91 29.0 1e-18 MDIKIVIAEESSLIRRGLSSMMPALSLPASGMNQRCVLTGEAASSAELLSLLGQHHPDIV ILGYSLTTSLSRPPLAGMDGLKLLRWLNQTYPAINVILISPYANAMLIRQALKEGVKSYL SRDINEKTLNQAIATVLKGEIYIESQLVNMLFRHEMTDIEKLSPREIDVLRLICKGLHLK DIAQHMHLSIKTVSAHKIRAMEKLDVQNDCQLYSLIIKNQMFDIRM >gi|333596725|gb|GL892087.1| GENE 1586 1745551 - 1746564 659 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 3 333 519 858 860 258 44 7e-67 MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ AALKEAGLSSTDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPM LEDNPPAFPFVALLVSGGHTQLISVTGIGKYELLGESIDDAAGEAFDKTAKLLGLDYPGG PMLSKMAAQGTEGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRNNDDSEQTRADIARAFE DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTD NGAMIAYAGMVRLNAGATADLSVSVRPRWPLAELPEA >gi|333596725|gb|GL892087.1| GENE 1587 1746801 - 1747016 357 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 7e-32 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|333596725|gb|GL892087.1| GENE 1588 1747132 - 1748877 1590 581 aa, chain + ## HITS:1 COG:ECs3949 KEGG:ns NR:ns ## COG: ECs3949 COG0358 # Protein_GI_number: 15833203 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Escherichia coli O157:H7 # 1 581 1 581 581 1094 91.0 0 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYH CFGCGAHGNAVDFLMNYDKLEFVETVEELAAMHNLEVPYEAGSGPSQIERHQRQTLYQLM DGLNSFYQQSLKHSAAEPARQYLNKRGLSDDVIARFAIGYAPPGWDNVLKRFGGNSEDRK SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGDALPKYLNSPETDIFH KGRQLYGLYEAQQDNAEPPRLLVVEGYMDVVALAQYDINYAVASLGTSTTADHIQLLFRV TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKAAFEA RMEQAQPLSTFLFNSLMPQVDLSTPDGRAQLSTLALPLISQVPGETLRIYLRQELGNKLG ILDDSQLERLMPKHAENGTVRPAPQLKRTTMRILIGLLVQNPELAPQVPSLAGLNHEKLP GLGLFSELVNTCLSQPGLTTGQLLEHYRGTKEAATLEKLSMWDDIADKDIAEKTFTDSLN HMFDSMLELRQEELIARERTHGLSSEERRELWMINQELAKK >gi|333596725|gb|GL892087.1| GENE 1589 1749043 - 1750887 2500 614 aa, chain + ## HITS:1 COG:STM3211 KEGG:ns NR:ns ## COG: STM3211 COG0568 # Protein_GI_number: 16766511 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Salmonella typhimurium LT2 # 1 614 46 660 660 1023 96.0 0 MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA THVGSELSQEEMDDDEDEDEEEDDDSSDDDNSIDPELAREKFAELRTQYEVTRDTIKAKG RSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMPK KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKEDVQRGLQKLHQIEEETGLTIEQVK DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR HPSRSEVLRSFLDD >gi|333596725|gb|GL892087.1| GENE 1590 1750982 - 1751488 454 168 aa, chain - ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 167 1 167 168 282 79.0 2e-76 MINDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIYQAGFTDRLLKPEEEQHLL DTRCGITMLVERPTVQASEVNLHELRSGGRELVKKIEDYQPAALAILGKQAYEQAFSQRG AKWGKQNITIGVTQVWVLPNPSGLNRATLDKLVEAYRELDEALMVRGL >gi|333596725|gb|GL892087.1| GENE 1591 1751850 - 1752191 129 113 aa, chain - ## HITS:1 COG:no KEGG:JW0234 NR:ns ## KEGG: JW0234 # Name: ykfI # Def: toxin of the YkfI-YafW toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 113 1 113 113 199 88.0 2e-50 MKTLPATTQRAAKPCLAPVAVWQMLLTRLLKQHYGLTLNDTPFSEERVIQEHIDAGITLA DAVNFLVEKYELVRIDRKGFNWQEQSPYLRAVDILRARQATGLLRQSRKNSVR >gi|333596725|gb|GL892087.1| GENE 1592 1752212 - 1752529 253 105 aa, chain - ## HITS:1 COG:no KEGG:ECL_03717 NR:ns ## KEGG: ECL_03717 # Name: not_defined # Def: putative antitoxin module of toxin-antitoxin system # Organism: E.cloacae # Pathway: not_defined # 1 104 1 104 105 203 95.0 2e-51 MTHINWGLQRAITPRLGARLVQEGNRLHYLADRASITGRFSDTECRKLDETCPHFIRQME SMLTTGELSPQHAHCVTLYHNGFTCEADTLGSCGYVYIAIYPTQS >gi|333596725|gb|GL892087.1| GENE 1593 1752549 - 1752770 149 73 aa, chain - ## HITS:1 COG:no KEGG:ECL_03716 NR:ns ## KEGG: ECL_03716 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 73 1 73 75 144 98.0 2e-33 MKIISKRRAMTIYRQHPESRIFRYCSGKYQWHGSVCHYTGRDVPDITGVLAVYAERRQDR NGPYACLMSITLN >gi|333596725|gb|GL892087.1| GENE 1594 1755749 - 1756087 316 112 aa, chain - ## HITS:1 COG:no KEGG:JW0242 NR:ns ## KEGG: JW0242 # Name: yafZ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 112 1 112 273 214 99.0 8e-55 MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQRE GFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTAS >gi|333596725|gb|GL892087.1| GENE 1595 1756179 - 1757042 497 287 aa, chain - ## HITS:1 COG:ykfA KEGG:ns NR:ns ## COG: ykfA COG3596 # Protein_GI_number: 16128238 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 287 2 288 288 525 89.0 1e-149 MKNKEGQQSLQDSLTGLPEWASERVMQQIRQLTNYEPAIGIMGKTGAGKSSLCNALFAGE VSPVSDVAACTREPLRFRLLVGDRHMTLVDLPGVGESGARDNEYAALYREQLPRLDLVLW LIKADDRALAVDEHFYHQVIGEAYRHKVLFVISQSDKVEPTSGGGPLSKEQKQNISRKIC LLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREATSPVVSQLQPSFRTTVVREQAR SDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVVSVARAVWDFFF >gi|333596725|gb|GL892087.1| GENE 1596 1757479 - 1758084 284 201 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A0336 NR:ns ## KEGG: EcHS_A0336 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 199 13 211 213 268 67.0 1e-70 MIKNDKRWIGDLLGGALMVRESRIIAKLLLSEPDETTWQQQIIDENILQASSTSTANRYA RTVKLRLMTLDRECWQLIADGSESERLQMLLVALMIQSPIVADFMADVVNPARQQFKEKL GINCWSEFVDENLRLHPELGAFSDSSIQKMGNNLIKALAEAGYLDTPRRRNLQTVFLLPD VAAALHRLNKAELLPILEGNA >gi|333596725|gb|GL892087.1| GENE 1597 1758081 - 1758683 439 200 aa, chain + ## HITS:1 COG:no KEGG:STM4497 NR:ns ## KEGG: STM4497 # Name: not_defined # Def: cytoplasmic protein # Organism: S.typhimurium # Pathway: not_defined # 1 200 1 200 200 320 74.0 3e-86 MNDPILDYRLKQLEERIGDDRFLKNQGSGNEIGFWIFDYPAQQELQVREYLAFLFKKLEK KYTFTQLNIFQVIIDMLEERKLFERICQREPELGLETLKKHLAAPLSQKKIAEYIARTVD LPSQQFVILTGLGNAWPLVRGHELMSALQDVMGFTPLLMFYPGNYSGYDLSPLAGINSRN YYRAFRLVPETGPAATLNPR >gi|333596725|gb|GL892087.1| GENE 1598 1758696 - 1762310 3142 1204 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A0338 NR:ns ## KEGG: EcHS_A0338 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 1204 1 1213 1213 1623 69.0 0 MNIEQIFEKPLKRNINGVIKAEQTDDESAWVELDEYVITRELDGHLRQFFEVYAPATGPG RLQLADKMGVWVSGFFGSGKSHFIKILSYLLANREVSHNGVTRNALSFFEEKIDDALLLA DIRKAVQHPTDVVLFNIDSRANVEDGVDAILKVFLKVFNELAGYCGDFPHIAHLERELDK RDQFDTFKAAFADITGSRWEDERDVYLMINDQMAKALSIATKQSEESSRQWIEQLDKNFP LDIKNFCTWVKEWLDIQGNRNILFMVDEVGQFIGKDAQMMLKLQTITENLGVICGGRAWV IVTSQADINAAIGGMSSRDGQDFSKIQGRFSTRLQLSSSNTSEVIQKRLLVKTEAAKPAL EAVWQEKGDILRNQLAFDTTTTATLRAYSNSKEFVDNYPFVPWQYQILQKVFESIRTKGA AGKQLAMGERSLLDAFQSAAVQISADGLDSLVPFWRFYSAIESFLEPAVSRTIIQACQSP SLTEFDGKLLKTLFLIRYVDVLKSTLDNLVTLSIDRIDTDKVELRRQIEASLNRLQAEML ISRIDDKFVFLTNEEKEIENEIRNIDIEFTTINKQLSTIIFDEILKNKKYRYPANKQDFD ISRFCNGHPLDGANLNDLVVKVLTPLDSNYESYKGVHSNSLLMTDSKDCILICLPDEART WQDLTMYAQTKAFLSKQSGQRPEQATLLAEKGRENGMREKTLKAQIEGLLAQADVWALGE RLDKKSSSPLAIVDAACGYVIENSFSKLKLLRLSTGDVNRETHALLTVENDTQLDLGDME ESNPEAMREVDNWISMSIETHKPVYLRDILTTFGRRPFGWPEDEVKLLVARLARSGKYSF TLQGSEIALKQAWDAFNNSRRYSDLRLHKVRRHDEAQLTKAAQLMAEIAGEPFNEREEQS LVSHIRELFGRWKSELTVFKTRAESGKNPGQKEIAEGLVLLNGILNEKEEYAVIEKVTAA AGDLEDFSEDWDDLVSFYKNQYATWQRLSTALNGSFKANRNALDKDETAQKLLQELEGIY SKARPYGELHRIIPLIETVETINQRLVEEYRSHALLQIDGHINELKQSMLEMLVPADLQH SLLHPMQQSRKKVEQNGLIPQIMEEQAEVRALQFKANERLNSWVEEQRKKVPVPKKSPQP GIIDPIDKPEPKLKKTIYVNTRKTMERAAGVTTLDNAEQVDKALEQLRKTLMDAINAGER VQLQ >gi|333596725|gb|GL892087.1| GENE 1599 1762360 - 1765965 2532 1201 aa, chain + ## HITS:1 COG:STM4495 KEGG:ns NR:ns ## COG: STM4495 COG1002 # Protein_GI_number: 16767739 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Salmonella typhimurium LT2 # 1 1199 1 1223 1225 1640 67.0 0 MNTSNIKKYAPVARKQFRDAVMQKLTTLGIEADKKGNVQIAQATDLGDLVRYGQFSLDKS LISRRERLVKRAEKQGYEVLVEHIAYTWFNRFCAIRYMELHGYLDHGFRMLSHPTLAGGF EVLDHVPEVADALGLDTSRLVEMKLAGDRDEELYRELLLAQCHALHGAMPFLFEAVNDEI ELVLPDNLTRTDSILRGLVDIIPEEDWEQVEVIGWLYQSYISEKKDDVIGKVVKSEDIPA ATQLFTPNWIVQYLVQNSVGRQWLQTYPVSNLKGKMPYYIEPAEQTPEVQAQLAAITPSS IEPESIKVLDPACGSGHILTEAYNVLKAIYEERGYRTRDIPQLILENNIFGLDIDDRAAQ LSGFAMLMLARQDDRRILGRGVRLNIVSLQESKLDIAELWTKLNFHQQVQRGTTSQMFPE EMTLANTDSAEYKLLMRTLALFTSAKTLGSLIQVPHEDEVALKGLLDELYRLAVEGDIPQ KEAAAELIPYIQQAWILAQRYDAVVANPPYMGGKGMNGELKEFAKKQFPDSKSDLFAMFM QHAFSLLKENGFNAQVNMQSWMFLSSYEALRGWLLDNKTFITMAHLGARAFGQISGEVVQ TTAWVMSNNHFERYQPVFFRLIEGNEELKKTVLLERENRFDNTLQEDFKKIPSAPVAYWL TPSIIDVFFRGEALRNISIPRQGNTTTNNEKFVRSWFEVNFDKIGLGYSSAKDFSEHKKK WCPYNKGGGSLKWYGLNESIVNWEDGGEQIKAIPHSVVANESNYFKPGITFSTVSSSGYG FRLFDNGFIFDNKGASIFIDGEKRLYLLAILNSKIFELTVHSITPTISLQPGDVAKLPVI EGDSTQMEKVISLSKEAVMKSKQSWDDKELSWDFKRPNFISNTALDEVLSNSINKYIISC QNHADCISDIENEINIELINIYDIREDVISNVVSGSDYINLTAMIGELISYIIGCQMGRY SLDREGLVYAHEGNKGFAELVAEGAYKTFPADEDGILPLMDSDWFDDDVTARVKEFVQTV WGEEHLQENLDFIAESLCLYAIKPKKGESSLDTIRRYLSTQFWKDHMKMYKKRPIYWLFS SGKEKAFECLVYLHRYNDATLSRMRTEYVVPLLARYQGNIDLVNDQLKSAESGAATTRLK KELDGFTKKFNELRNFDDRLRHYADRRITIDLDDGVKVNYGKFGDLLADVKAITGSTPQE A >gi|333596725|gb|GL892087.1| GENE 1600 1765965 - 1767086 655 373 aa, chain + ## HITS:1 COG:alr0507 KEGG:ns NR:ns ## COG: alr0507 COG4637 # Protein_GI_number: 17228003 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Nostoc sp. PCC 7120 # 8 348 8 366 394 100 24.0 6e-21 MDQHPLIIKGYKSIAELSLVESPPFITFAGANGAGKSNITDALAFFGAVVKTGATQAIRD FGGFQQIHCYKLRSENRTTASLHLDIELAGKQFTYDLTIKSMNKKPAITERLAINGEIYI DRRQPDALTIRLSDDPEIPPAHFPNYSSDMTALMLLGKSELYAFLTNIVVFRIDPLRAKE PDGAKTDASFLDPHGKNIASVLAELESNSDFKEQILDWMELIVPGMENVSTEKQKLDGST VLTFKEHGTKARFPAHLISDGTIYTLCIMTAILSRAQQTGMTIIEEPERGIHPKAIGELV QLMRENATLEHPIIITTHSESVVRNLEPDELWLVSKQEGKTQLKRASDAGVDKKKIPLDT AWLTNLFNGGLPW >gi|333596725|gb|GL892087.1| GENE 1601 1767080 - 1767649 306 189 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1642 NR:ns ## KEGG: NT05HA_1642 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 33 187 1 155 158 142 45.0 6e-33 MVKVGFIVEGSTESIIVNSSLFVAFLQNHGFELVTPVVDAKGGGNLLPKYVDSFVAELKG AGAEKICILTDLEDEASTEVVRARIAHGEVDVSFIAIKAIEAWFLADSEAMKVWLNVDEF YEDQPEVTVTKPWDRLKQIAQQLNKPGTGPSKTIFANKMVTRYGFDVSKAAAHPNCASAR ELVDWFENQ >gi|333596725|gb|GL892087.1| GENE 1602 1767649 - 1770246 1870 865 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A0340 NR:ns ## KEGG: EcHS_A0340 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 865 1 865 865 1187 67.0 0 MQFKELESGLRQKFNDNRIVFWHDPEQRFTDSLNELDLDNVTLLDMGGVSVLATKKRIEI DEPTQKFLLYFTSEVPAHEQDWLLDIRLYSTEFHADYAAITLNSLGIPQLGLREHIQLRK AFFTVKRTQLLKGWVTERETEKSLDKKMLAVVAGASTFETKEILFALIQQFVAASHQDDS ALENTFAVLKKLGLDKVLWEILNLELGYQAEAPTLENLLLKLFCTDLWAQGDDAHREWLS KNVLTTAAGRASALAFMGAWRNDRRYKTEYDYCAADLQQTLQPKEHYNYSSPYALAKCDT FEAIEQLIIRGLVTQLQEESTTLDRDAFKALVSERSAKYWSQTRPEYLSIWNALRQAERL LNLRNHYTDGFNFPDTGTFWKAYCGEIYRFDQTYRLFNEYAAPVHSKGAMILHELDKFIE ELYSNWYLAELSRGWNKLLEAENRMQTWQISGVPLQRNFYKENVKRQFDTSQVKRVFVVI SDALRYEVAEELGRHINHEKHFSAELRSQTGVLPSYTQLGMAALLPHESLSYLPDNSGVV YADGMSTSGFEKRASILAKVNGVALSAKELQSANNQDVNDQIRNASVVYIWHDTIDAIGD KAATEDKTFEACRSAITELKDLVSRLRNRFNASRIFVTADHGFLFQQQALVEQDKTKLES KAVNAIEAKKRYIVGHQLPVNEFCWHGKLSDTAGTNDESEFLLPKGVQRFHFAGGARFVH GGAMLQEVCVPVLKIRALEKKAAEKQPQRQPVSVVARDHVIKLVNSIDKVGFIQTTAVDD LNEPRTLNIFIVDENNQVVSGMETVCFDSDNDDMGKRTRDVTMKLMGTAFNRKNKYVLIL ENADSATEYGRYPITIDLAFQDDFF >gi|333596725|gb|GL892087.1| GENE 1603 1770257 - 1772326 1498 689 aa, chain + ## HITS:1 COG:STM4491 KEGG:ns NR:ns ## COG: STM4491 COG4930 # Protein_GI_number: 16767735 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent Lon-type protease # Organism: Salmonella typhimurium LT2 # 18 689 23 694 694 1307 92.0 0 MQQQDNSATNMEMASVQDLDSLLNQHFRGRVVRKDLTKQLKEGANVPVYVLEYLLGMYCA SDDDEVVDQGLQSVKRILSDNYVRPDEAEKIKSLIRERGSYKIIDKVTVKLNQKKDVYEA QLSNLGIKDALVPSQMVKDNEKLLTGGIWCMITVNYFYEEGQKTSPFSLFTLKPIQMPNM DMDEVFEARKQFDRDQWIDVLLRSVGMEPANIEPRTKWHLIARMIPFVENNYNVCELGPR GTGKSHVYKECSPNSLLVSGGQTTVANLFYNMASRQIGLVGMWDVVAFDEVAGITFKDKD GVQIMKDYMASGSFSRGRDSIEGKASMVFVGNINQSVDTLVKTSHLLAPFPDAMIDTAFF DRFHAYIPGWEIPKMRPEFFTNRYGLITDYLAEYMREMRKRSFSDAIDKFFKLGNNLNQR DVIAVRRTVSGLLKLMHPDGAYDKEDVRVCLTYALEVRRRVKEQLKKLGGLEFFDVNFSY IDNDSLEEFFVSVPEQGGSELIPAGMQKPGVVHLVTQADSGMTGLYRFETQMMAGNGKHA VSGLGSNTAAKEAVRVGFDYFKGNLSRISAAAKFSEHEYHLHVVELHNTGPSTTTSLASL IAFCSMLLAKPVQEQMVVLGSMTLGGVIKPVQDLAACLQVAFDSGAKRVLLPMASAMDIP TVPTELFTKFQVSFYADPVDAVYKALGVN >gi|333596725|gb|GL892087.1| GENE 1604 1772441 - 1773067 -59 208 aa, chain - ## HITS:1 COG:no KEGG:JW2607 NR:ns ## KEGG: JW2607 # Name: yfjJ # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 208 1 208 208 395 97.0 1e-109 MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSG AISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNGKRHYHLILCFNQDA YYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRENFEETYND LLNRVDYMTKVRTKIFGDGDRNFGCSRG >gi|333596725|gb|GL892087.1| GENE 1605 1773205 - 1774365 135 386 aa, chain - ## HITS:1 COG:no KEGG:JW2605 NR:ns ## KEGG: JW2605 # Name: yfjI # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 386 84 469 469 602 73.0 1e-171 MEPLYQLEENLFEKYTHDLTVWRNDEAIFNIEKKSLMSKLKSEIRRNKDHLATNEKLKVL LASHPKSPVRFKQIFNDATPAAIKDYLCGYWRSVGIMSDEAGTIFNGYTLNELPFINKMW DGAMFPVERKGEPEKLIRDARMTLSLMVQPNIFKGYIKRKGDMAKGIGFFARCLICQPGS TQGNRQITSPVVSTEYLPIFHQRLMKIVNESIARNNENDRLCLRFTVEAEKRWIAFSNNV EYEMGILGRLSNFKDYASKMAENMARIAALLHHFNGDEGDISLLTVEAAVEISTWYVGEY VRLFSKPQEFTLAISEADELYWWINNYCIRLKASWITKNTVLQYGPNKFRNRSKANEVLN TLYSQNRILTEKKGKTVFIAIAGSIF >gi|333596725|gb|GL892087.1| GENE 1606 1774747 - 1774983 173 78 aa, chain - ## HITS:1 COG:no KEGG:Dd1591_0922 NR:ns ## KEGG: Dd1591_0922 # Name: not_defined # Def: phage transcriptional regulator AlpA # Organism: D.zeae # Pathway: not_defined # 1 78 1 78 78 125 83.0 4e-28 MKTTFNYPTPQERLQVLRNYGEPHDRLVREKERQYITSVSRSTAWKLEQVGQFPLRKSIG LKSCGWLLSDLLCWINER >gi|333596725|gb|GL892087.1| GENE 1607 1775175 - 1776038 274 287 aa, chain - ## HITS:1 COG:no KEGG:Entcl_0671 NR:ns ## KEGG: Entcl_0671 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae_SCF1 # Pathway: not_defined # 16 285 17 257 262 135 31.0 2e-30 MENKSQFLTVETICIKYSIKLENIIELWCDNNIPLYIHLEGNPCQLSCSIRKDDESHLKE VLNDIPTEIGSPNSSLDNIEQHKYFIEDRKVEIINEVDLYQKDKSPLTKIRQFRMKKGAG IFYIPIGDDQFYYDGYAYGYWRIKPGPTTRFIKGDYKISNSNPLLSDDDVSALLKVIGHD EGDFLIFKEAIEVNKRELCMNVDDIENLEFALTGSSKIEKKESENRYSKVEHLALYILLN EYCLENDGSVNFTTMAGVLTSLNKNKYGGEYEFKPETIRRWLKNIPK >gi|333596725|gb|GL892087.1| GENE 1608 1776177 - 1776335 56 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKQSISPQVTKAQIYRSVASSTAIETGVSVQKIEQQLKKNQAQAKAVGLAR >gi|333596725|gb|GL892087.1| GENE 1609 1776684 - 1776944 104 86 aa, chain - ## HITS:1 COG:no KEGG:YPK_0608 NR:ns ## KEGG: YPK_0608 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 80 1 80 204 135 80.0 7e-31 MAKYELNSAEERYQPDSGDLVLANKLGIIDEQEMDTLESGLLLMLYEQLFIESQPPEALV FEHISRWHRQWLGNVYDWRGGCVMPT >gi|333596725|gb|GL892087.1| GENE 1610 1776949 - 1778265 844 438 aa, chain - ## HITS:1 COG:mlr0958 KEGG:ns NR:ns ## COG: mlr0958 COG0582 # Protein_GI_number: 13471077 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 30 431 32 411 417 166 33.0 6e-41 MAANLTETAIRGLKTKSTAYYVWSNSAQRGTGRLGVKVQPSGSKVFYFRYYVEKGKKEKF IQLGIWPEMKLVTANELAKKYGAWLVEGKEPQQELEQQRLAEQHIMQIHRSQGSFEELVH GYVNKMKLDNKRTWADVLKRLEKECYTVIPRETKAKDVTPLQIKTILSGIIQRDAVVHAN RIRSYLMAAFNYGLKADNDPMNTSVGITFGLEVNPVSAIPKQSSAEKVGDTWLTLEELRV VMEQFAEATNVGPLMQHLIRFCVYAGGQRPFEMIASQWSAIDWQQKTLLVIADVSKNKRE HLIPLTDSALQELASVKELAKESGSPYIFPLSTNGERPVRTDSLARSIMYFRAFNPEFKV FTARDLRRTCKTLMGEAGISKEIRDRIQNHALNDVSSKHYDRYDYLPEKRRALEIWEDRV NNYQRQQENNVVNLFGRR >gi|333596725|gb|GL892087.1| GENE 1611 1778607 - 1779086 258 159 aa, chain - ## HITS:1 COG:STM2764 KEGG:ns NR:ns ## COG: STM2764 COG2801 # Protein_GI_number: 16766076 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 82 74 155 155 154 91.0 9e-38 MHDALACGRRFRTLNVIDDFNREALSIEIDLNLPALQVVRVLDRIAANRGYPVMLRMDNG PESISLALTEWAERHAVKLEFIQPGKPTQNAFIGRFNRTYRTEILDFYVFRTLNEVREIT EKWLSVYNCERPHESLNNMTPEEYRQHHYLAGISKNAWN >gi|333596725|gb|GL892087.1| GENE 1612 1779452 - 1779577 62 41 aa, chain - ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 41 48 88 88 60 92.0 7e-10 MEASDIKKIKDLEDENRRLKQMFADLSLQNRVLKDVIEKKL >gi|333596725|gb|GL892087.1| GENE 1613 1779596 - 1779718 95 40 aa, chain - ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 40 1 40 88 73 97.0 8e-14 MRKARFTEHQIIAVIKSVEAGRTVKDVCREAGISEATYYN >gi|333596725|gb|GL892087.1| GENE 1614 1780015 - 1780299 87 94 aa, chain - ## HITS:1 COG:no KEGG:Pvag_0919 NR:ns ## KEGG: Pvag_0919 # Name: not_defined # Def: hypothetical protein # Organism: P.vagans # Pathway: not_defined # 1 94 85 178 179 144 64.0 1e-33 MPPSSDNKGMFINEFTLKPDQYIKVIHYWTQQGYYQNSERSVSYDFIPQPNHDYDIIVTG SEFSGDNLNIKDLNPDAKVIRWGDVKICQSDSIF >gi|333596725|gb|GL892087.1| GENE 1615 1781080 - 1781700 210 206 aa, chain - ## HITS:1 COG:no KEGG:EpC_29090 NR:ns ## KEGG: EpC_29090 # Name: not_defined # Def: putative adhesin/hemagglutinin/hemolysin # Organism: E.pyrifoliae # Pathway: not_defined # 1 148 69 216 228 152 60.0 6e-36 MDSYVNTAASWNQYAAANGLTLEKTQAGLDKLVKGDLPEGANIAKASVEDNQDGVLVAGA WYPGLAASVGKVAGGVILALSANGGYQYNVLSKLGNENKSWDYLGSATSFTTGMLAPGRG IWAKTGIATGGTVFTDGPDGAALTSAGAGAFIGGGFGKYAPVILVPVFGNSAAFVGDVGS AFMSEIISNGMKNNSNSTNKKEAGND >gi|333596725|gb|GL892087.1| GENE 1616 1781729 - 1781986 61 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261223582|ref|ZP_05937863.1| ## NR: gi|261223582|ref|ZP_05937863.1| hypothetical protein EscherichiacoliO157_03101 [Escherichia coli O157:H7 str. FRIK2000] hypothetical protein EscherichiacoliO157EcO_24737 [Escherichia coli O157:H7 str. FRIK966] hypothetical protein [Escherichia coli O157:H7] # 1 85 1 85 85 90 85.0 2e-17 MKYSSRVVIGKFIICSSILLLCCIGMMLAAITIKLAFIALIWFQSGIFEVVLSDIVYAAQ LGGLGGFILGCCWVLLYLFKAKGFS >gi|333596725|gb|GL892087.1| GENE 1617 1782175 - 1782642 319 155 aa, chain - ## HITS:1 COG:YPO0599 KEGG:ns NR:ns ## COG: YPO0599 COG3210 # Protein_GI_number: 16120928 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Yersinia pestis # 1 139 3078 3216 3295 134 51.0 6e-32 MGGSEDAQAAWIRQHGIDMATCADSPTGAACQKAMNERDSVGLVPATGTVALLPGSTQAM WGLGASANAGISYLADGTVDPANAAIAGWVNVFSQGNGLTGTVGWNAAGGALGNWIDNKD PLSGAISNGIGSAAGYGIGKGITWGTDKITNSVEK >gi|333596725|gb|GL892087.1| GENE 1618 1783011 - 1783322 81 103 aa, chain - ## HITS:1 COG:no KEGG:ETA_19540 NR:ns ## KEGG: ETA_19540 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 1 103 4 106 106 148 69.0 7e-35 MKLIDYKNKSIKRGTVFRLPAVWPYEEWVDFMVIDLFETHGLVVSSGHKAGLILISLPIE SASTEGRALSTEWVITNWAKWIYPDCQVENVHILDEYVATPIE >gi|333596725|gb|GL892087.1| GENE 1619 1783322 - 1793629 8413 3435 aa, chain - ## HITS:1 COG:YPO2490 KEGG:ns NR:ns ## COG: YPO2490 COG3210 # Protein_GI_number: 16122711 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Yersinia pestis # 1885 3185 1088 2333 2535 648 41.0 0 MEKDQIRFSQRALSALLSVLLATQPLLPAVAATIAPSGNTQMDKAANGVPVVNIATPNQS GISHNKYNDYNVGKEGLILNNATGQLNQTQLGGIIQNNPNLKAGQEAKGIINEVTGANRS QLQGYTEVAGKAANVIVANPYGITCNGCGFINTPNATLTTGKPVLDASGRLQSLDVTKGV VTIEGAGLDGSQSDAVSIISRATEINAQLHAKAVRVIAGANRVAADGSISALKGEGNAPK VAVDTGALGGMYANRIRLVSSETGLGVNLGNLNARQGDITLSSAGKVVLKNTLASGSTRV SAKEVTLTGDHKAGGNLTVSGQTALTLDQAHIAAEKNLQLATDGKLTQNGGAFTAATDTT LTAKNLTQSADVQTGAGRNLTVNVAENAALKGKNIAGQDATVNAKTLETGTQLTASRNIS LEASQRAVLNGSVVAGQQLSVKGGELAQHGNVSASDITLSAQTLAQESSSKTSASGNIAL TTSGNTQLKGSTTAGKSLAINAGNLINSGMLSAGADASVKTGTFSNTGTVQGNSLNVSGT DITSTGTLTSASTLGINARNATLSGDTGAKGKATVIASGKLENSGTLISDDTLTLKAAQV TNRGTLSGARGLTSSADAFISTEKSVTHSDGDLALNNSETTLEGETSAGGSVNVRGHSLT TTATAQTQGNRVSVDVQNAQLDGTQAAKDGLILNATDALSHGGKSSASSLKIETRNLNNS GTLTASSLAVNSPVVINSGLIHAGQTLSLVTHLLDNRSSGVLYSPASLTLSVSDVKNSGI ITSDAGLSLSGSRLSNSGELSGASLLVDYGTLNNSAGGLLLAQGANRITAQSVTSAGSIV GNTLALNADRLDGRGLLQGDTALSVTAGILNLLAGSRTLTAGTLTFSGTTLTTAGQLQGQ DVSIRGRDWHNSGSSLATGSFDAIAAGAFSNTGELMSQGDITLNAVNTVNNGNLLSAGTL SLTGNTLRNSGTVQGNRVTAHQDSITNSGTLTGIAALTLAARLEMAAPLLSLVNDASGSL LTAGELTVTGGDLRNTGQWQGKRVFIHAQALTNGGAIQAENLLDAHINGSLTGTTGSKIT SNGELALSALTLANSGQWIAKDLTLKGNTLTNSGEITGVDALSGALNQNLNNQAGGKILT AGVLSLNTGNATNAGQIQGKTTAITAGQLSNSGRLQGEALTLNVSGALNNTASGVLLSQN ALKASSATLNNQGTVQGGGESTVNATTRLQNDGKILSGGKLTLTTPELANGSGGLVQAVT LLLDVVKAVNGGNILATGRAELRGGSIDNRGTLQGADLGVQYRNITNSGTVLGTASLTVA GDSLTDTGSGKLYSGGSLLLDIGNFSGRGQVVSLGDATLKLVNALVNTGTLAAGKTLSVS SQNAITNSGVIQGNAIALSAGGAFTNSGTLTTGNGSSTFNAQSLLLNASGSLQAGGDVQL TSRENITVNGFTGTAGSLTMTAAGTLLNTALIYAGNNLSLFAARIHNIYGDILAGNNLWM QRNAVGTANTEIINTSGNIETLQGDITMKTGLLLNERDGFSATTTTTSNPSVISGMGGVT IDVPLYLMPDGSYGYFTREVENQHGTPCNGNGACNITIDTLYYYAPFAENATQRFLNSQT VTTVIGGDNPAGRISSGKNLTAQADLLENRAGFILANGDIALSGNQLSNQSWQTGTENTY FVYRYEPKATYWNGDYATGSLDELGPLLPDFENNTIKFTLDGRANEYAPGETYYSMIMAG GNVGLNFASTINNGTTTAHAGSFSPQVSTPALNTLSKQDISGALTQTDLQDSGTVAVTSP QWRDALSDALKDISGGSSLSDQNGSSGNYPLPSGDNGYFVPSTDPDSPYLITVNPKLDGL GKVDNSLFDGLYDMLGIQPGDAPRETNSAYTDRNQFLGSAYFLDRLGLNPDRDYRFLGDA AFDTRYVSNAILNQTGSRYINGIGSDLDQMRYLMDSAATQQQALGLKFGVALTAAQVAAL DHSLLWWEAATINGQTVMVPKVYLSPKDVTVHSGSVISGNNVQLAGGNVTNSGSTITAQN VLSIDSSNSISNLNAGLISAGGGLNLSALGDINNIGSTISGKTVQLESVGGSINNVTRIQ QWSVGDDSRRGSVHVSGTAAGQTASISASDGLYMAAANDINITGAKVSAGGDLGMSAGNN ITIAANQITDSSSRSGFWRQKDTASSSTSNQGSSITAGGNAVMQAGNDLNVTASAIYAGK TAQLVAGNNLNLNAAGNGQTSRTGGSESHQSSADRTTVSAGDNVTLVAGRDVTSQAAGIA AEGNVGIQAGRDVSLLAEESVTGSSSHSKKKTVIDESVRQQGTEIASGGNTTIIAGRDVN SEAAQVTASEDIGVAVGRDVNLTTATESDYHFKEETKTKKGFLSKKTTHTIEEDSATREK GSLLSGDNVTVSAGNNLRVKGSAVAGDGDVALSAGNNVDIVAATNTDTSWRFKETKKSGL MGTGGIGFTIGSSKTTHDLREQGTTQSESFSTVGSTGGSVSITAGKQAHIGGADIIAQKD ISLTGDSVVIEPGHDKRTRDERFEQKSSGLTVALSGAAGSAVNNAVTTAQSAKQSSDSRL AALQGTQAALSGVQAGQAVTLDQAKGSPDKRNNNTIGVSASIGSQSSKSSSHMESETTTG STLSAGNNVTINATGSDITVAGSQIKAGKDVTLDAARDVNLIASQDTQQITGKNSSSGGS LGVGVGVGSGGAGISISANANSSKGHEKGNGVWQNETTVDAGNRVTINTGRDATIAGAQV SGDAVVADIGRDLTIASTQDSDHYNSRQNSASGGVGYTFGAGGFSGSISASRDKMTSDYD SVQEQSGLFAGSGGFDVTVGNHTQLDGGVIASTATADKNSLDTGTLGFSDIHNQADFKTE HQGAGISSGGSIGGQFAGNMANALLAGGGNSGHAEGTTQAAVSEGSLIIRDKESQKQDVA DLSRDAAHANGSISPIFDKEKEQQRLQEVQLIGEIGTQAADIANTYGETEGLKAARDALA KEGVTEPGADASDALKKAYQDALRGTDAYKTTTAKYGTGSDLQRGIRAATAALQGLAGSD LTAALAGASAPELANYIGHGSGLSDEAAVVAHAILGGAVAALQGNSAAAGAAGAATGELA AKAIAGMLYPDVNDLSKLSEEQKQTVSALATISAGMAGGLAGDSTASAMAGAQAGKNSSE SNSLAGDRAREAAKQAAESLKNQVRETLGEGTTSSIANGIINALADTGDAALGSADYAAD AAMALASCAAGDSYCSKAMSDLAGKNQAVADSVTALMRSETWSAVADTVKEAAGENQAAL EATGGLLAGIILPGKKLPNAGKLVDPTVKIATGNTVGAFEASLSKLPPGERVAIVKETVN KVIVEQGMVKDNRLTKLNNRDVYRGVDGNLYALDTQHGRFEAVSLKGKHLGEVDFSMQKI PNSIDKSGGHDLKVK >gi|333596725|gb|GL892087.1| GENE 1620 1793642 - 1795318 1450 558 aa, chain - ## HITS:1 COG:PA2463 KEGG:ns NR:ns ## COG: PA2463 COG2831 # Protein_GI_number: 15597659 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Pseudomonas aeruginosa # 11 558 10 565 565 316 34.0 6e-86 MLGKTAIINALAGVTLLVSGAALAAPLSPADRNTIQQQQQQLLDENQRQREELERSAIVP RPVTPDDAFTPQGPCFVIRRIELSGATLLSPSAKNRLTAPWINQCLDMARLTRLTDAVSD WYISRGYITSRAFLTEQDLSGGVLHLAVLEGKLQHIRLEGVPDRTLKMTFPGLEGKILNL RDIEQGMEQLNRVRQRPVEIEILPGDRQGYSVVNLTATPEFPLSGSVSFDNSGQKSTGTG QLNGALYGNNLLGLADKWFISGGRSSDFSNSKDAQNFAAGVSIPYGYGLLDYSYSWSNYL STIDNNGYFWRSTGDTETHRLTGSWVLFRNGDIKTGVSAGITHRINRNYLDDVLLATSSR KLSSLSLGINHTQKIASGVATLNPTFTQGVPWFGAEDDSDKQGDVPKAEFRKWSLNGSFQ RPLADKLWWLTSVYFQWSPDRLYGSERLTLGGETSVRGFKEQYISGDNGGYWRNELNWSL FTLPWIGDVGVLAAIDGGWLKKDGLDRYASGTLWGTALGLTATNRWYSSQFTVGTPVDYP DWLAPDHLVMYYRFSVAF >gi|333596725|gb|GL892087.1| GENE 1621 1795631 - 1796800 1494 389 aa, chain + ## HITS:1 COG:YPO3641 KEGG:ns NR:ns ## COG: YPO3641 COG1076 # Protein_GI_number: 16123783 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Yersinia pestis # 1 383 1 384 391 323 55.0 4e-88 MSTPIKRLEIIKNAIELEDDDIIQSQLTRLKNEAFDEELQAIVVALENKNYTAAIRAITA WLQSQRAVTPWRDPQLAASKLELKALEERLRDLIDRRNARVQQLDEFNDLYFSRLGPLMQ QILALRKTLAELNLRRQQAEARRREEDYRRCQGYMAQAVEVLATLTRRWRDLPADSVQAA EARKHLQQQSNLIANLLAEAMELEHGLTREEEPARQARDEANEEYKKYREQHHDAEVRLR KGKDLSEEDRNELKRLWRQASKLCHPDLVADDLKEEANRMMVQLNQAKQRGDVKAIRSLV ARLQQGFEPMMASDRLNDLERIRKKMAQVREQIDTLVNELAELEKEESWLLVSSLSNMEA YFAQQEKALKEVCASLELQVSEAQLDPAA >gi|333596725|gb|GL892087.1| GENE 1622 1796801 - 1797565 918 254 aa, chain - ## HITS:1 COG:STM3214 KEGG:ns NR:ns ## COG: STM3214 COG2375 # Protein_GI_number: 16766513 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Salmonella typhimurium LT2 # 2 254 4 255 255 385 71.0 1e-107 MASTRYPQRVRNDLRFRELNVLRTERVSAGFQRIVLGGEALEGFSSRGFDDHTKVFFPAP GTTFVPPVVTDEGIDWGDGVRPQARDYTPLYDDEKHELALDFFIHDGGIASHWATEAKEG DKLTIGGPRGSLVVPEDYAWQLYVCDESGMPALRRRLEGIAKLPVRPAIHAIVTVGDAAY QDYLAHLSGFNITWVIGHNEQAVADHLAALTVPDEDYFIWLTGEGKVVKRLSRQFDTDDI DPQLVRASAYWHAK >gi|333596725|gb|GL892087.1| GENE 1623 1797711 - 1798205 584 164 aa, chain + ## HITS:1 COG:STM3215 KEGG:ns NR:ns ## COG: STM3215 COG1695 # Protein_GI_number: 16766514 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 17 164 68 215 215 228 76.0 5e-60 MRHEHEGGGRRPRFFGHGDLRLVILDILTRNASHGYELIKEIENLTQGHYTPSPGVIYPT LDYLQDQTFITITEEENGRKRIAINAAGQQWLDDNREQLEQIQTRIKARSVGFQLRKNPQ MKRALDNFKAVLDLKVNQGELSDAQLKQIIGVIDRAALEISQLD >gi|333596725|gb|GL892087.1| GENE 1624 1798202 - 1799761 1536 519 aa, chain - ## HITS:1 COG:STM3216 KEGG:ns NR:ns ## COG: STM3216 COG0840 # Protein_GI_number: 16766515 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 513 1 513 521 612 74.0 1e-175 MFIHDVKIGTKLFLAFGLFIVLMVVSASLSLMSLNRANNGMQTILTSDYPTTVKANQLID NFQEFISTQQLMLLDEQGTYTAQSEQRMKAISERITAILSELDNDLKDKKSQQVLADIHG VRQQYLDSRYRILQAVQNNDRAGAVNEMMTNTLNLQQSYKAKVQALIAIQDQEMQHAGAQ VEGDFRTNRLLLILITLFSVAAASVIGWFIVRSITRPLNDAVNFAQAIAEGDLTGSITSH GKDETGLLLTALMEMKTRLLEIVQQVQTGSENISSAAAQIVAGNQDLAARTEEQASSVEQ TAASMEQITATVKNTASHTGEATNLSADAAAVVKNNGEMMKQVTSKMRLINETSNRMSDI IDLIDAIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSATSASEIRQLIESS TSQTQDGMNLVEKASGLINGMVGNVEEMDVILREIRQASHEQTEGISQINSAIGLIDATT QQNSALVEESVAAAASLNEQAMHLKELVRVFRVSNSVLA >gi|333596725|gb|GL892087.1| GENE 1625 1800001 - 1801521 1484 506 aa, chain - ## HITS:1 COG:Zaer_2 KEGG:ns NR:ns ## COG: Zaer_2 COG0840 # Protein_GI_number: 15803613 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 EDL933 # 125 506 1 382 382 531 79.0 1e-150 MSSPDYVTQNEYPLDDDTTLMSTTDLHSYMTHTNDTFVQVSGFSLQELLGQPHNIVRHPD MPKAAFADMWYTLQKGEPWSGIVKNRRKNGDHYWVRANAVPMVRNGQMTGYMSIRTRATR DEIAAVEPLYQALNEGRCKKRIHKGLVVRKGWLGKLPAMPLRWRVRSVMAGLFAVMAATL VASAAGWASLVAAAVVMLLGTLVFEQQIVRPVENVARQALRVATGERNSVQHLNRSDELG LTLRAVGQLGLMCRWLINDVSSQVVSVRDGSDRLAQGNEDLNDRTRQTVANVQQTVATMN QMAASVQSNSETAAEVDKLSMAASSAATQGGTVMQTVVKTMDDIADSTQRIGSITSLIND IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASASKVQS GADQVHAAGRTMDDIVEQVKNVTQLIAQISHSTSEQATGLTELTRAVAELDSITQKNADL VEESSQISAMVKHRAGRLEDAVTVLH >gi|333596725|gb|GL892087.1| GENE 1626 1802034 - 1803323 1534 429 aa, chain + ## HITS:1 COG:ygjG KEGG:ns NR:ns ## COG: ygjG COG4992 # Protein_GI_number: 16130968 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 429 68 496 496 825 94.0 0 MKQLNREVIDYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGG FGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFSNSG TESVEAALKLAKAYQSPRGKFTFVATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV PFGDINAMRTVLSECRKTGDDVAAVILEPIQGEGGVILPPQGYLPAVRQLCDEFGALLIF DEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHT TTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLGREYPDLVQDARGKGML MAIEFVDNETGYSFASEMFRQRVLVAGTLNNSKTIRIEPPLTLTIEQCEQVLKAARKALA ALRVSVEEA >gi|333596725|gb|GL892087.1| GENE 1627 1803393 - 1803974 726 193 aa, chain - ## HITS:1 COG:STM1664 KEGG:ns NR:ns ## COG: STM1664 COG1396 # Protein_GI_number: 16765008 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 2 193 9 200 200 243 63.0 2e-64 MTEAGADVAQVSLAVANRIRSWRKEKKLSLDELSRRASVSKGMLVEIEKGAANPSIAILC KLAAALGVSVADIVNVSSEPQVHIIQEEAIPVLWQGAQGGYARLLAGTAGPDMIELWQWE MHPGETFTSPGHPAGTFELLHVNEGVLTLTVDETVAQVNAGASAVAKTEAAHGYANKGDT VLRFTMTVAEFHR >gi|333596725|gb|GL892087.1| GENE 1628 1804038 - 1804727 727 229 aa, chain + ## HITS:1 COG:PA4181 KEGG:ns NR:ns ## COG: PA4181 COG3382 # Protein_GI_number: 15599376 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 4 229 7 232 239 288 64.0 7e-78 MSLVTPSIDSRLVGIAPGFRALSIQVEAAPITQPEVAPAALAQACQQMLNDDVPWAENHL AAWDEVFKAFGAKPKRTPCSASALRKRVMRDGSLPPLDPVVDIYNAISIRYAIPVGGENL AAYSGVPRLTLADGSEPFDTFKEGEPVVENPEPAEVIWRDDLGVTCRRWNWRQGIRTRLD SQAQSMWFILESLPSMPLAALQEAGDELVSNLQKLMPGATARVQLLELA >gi|333596725|gb|GL892087.1| GENE 1629 1804813 - 1805106 390 97 aa, chain - ## HITS:1 COG:STM4079 KEGG:ns NR:ns ## COG: STM4079 COG1359 # Protein_GI_number: 16767345 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 96 14 109 109 136 64.0 1e-32 MNVTLVEINIKPERVDEFLEVFRANHEGAIREPGNLRFDVLQDPRVKTRFFIYEAYKDEE AVLAHKQTPHYLACVDKLEELMSEPRKKRCFVGLLPE >gi|333596725|gb|GL892087.1| GENE 1630 1805103 - 1805990 1129 295 aa, chain - ## HITS:1 COG:YPO0408 KEGG:ns NR:ns ## COG: YPO0408 COG1830 # Protein_GI_number: 16120742 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Yersinia pestis # 1 290 1 290 291 481 79.0 1e-136 MADLDDIKDGKDFGIGTPQQNVPYTLKGCGSLDWGMQSRLARIFNPQSNRTVMLAFDHGY FQGPTTGLERIDLSIAPLFGETDVLMCTRGILRSQVPAATNKPVVLRASGGNSILGELSN ECVAVAMEDALRLNVCAVAAQVYIGSEFEHQSINNIIKLVDAGARYGMPTLAVTGVGKEM ARDARYFSLASRIAAEMGAQFVKTYYVDEGFEKVTASCPVPIVIAGGKKLPEHEALEMCW RAIDQGASGVDMGRNIFQSSAPLAMLKAVKKVVHENMSAREAFQFWQEEKQGEAK >gi|333596725|gb|GL892087.1| GENE 1631 1806002 - 1807003 1500 333 aa, chain - ## HITS:1 COG:YPO0409 KEGG:ns NR:ns ## COG: YPO0409 COG1879 # Protein_GI_number: 16120743 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 2 333 5 339 339 528 82.0 1e-150 MKTKLLVLAMALSFASAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKDLGVDVTYDGPTE PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIY INQGTPEQLGGLLVEMAGKQVTKPNAKVAFFYSSPTVTDQNQWVKEAKAKIEKEHPQWQI VTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKREGVAIVGFST PNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADRLLKKGDLNVGDSVDVKEIGALKVEPN SVQGYQYEAKGNGIVLLPERVVFTKENINKYDF >gi|333596725|gb|GL892087.1| GENE 1632 1807005 - 1807982 1282 325 aa, chain - ## HITS:1 COG:STM4076 KEGG:ns NR:ns ## COG: STM4076 COG1172 # Protein_GI_number: 16767342 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Salmonella typhimurium LT2 # 2 325 7 330 333 373 67.0 1e-103 MRLNWESALLILLVLEILLFGALNPRMLDINMLLFSTSDFICIGIVALPLTLVIISGGID ISLGSTIGLCAIALGVMMQAGWPMAVAIPLTLLLGLLCGLLNAALIHYTGISPLVITLGT LYLYGGGALLLSGMAGATGYEGIGGFPDSFTAFANLTVVGLPIPLVLFAVITAFFWLITH RGRFGRHLFLIGQNPRAARYAALSVNGMPYALYGLVGVASAIAALVMVSYFGSARSDLGR DLLMPALTAAVLGGANIYGGSGSVVGTALAALLVGYLQQGLQMVGIPNQVSSALSGALLV VVVMGRSLSLHREWVRSLFRKLSGA >gi|333596725|gb|GL892087.1| GENE 1633 1807983 - 1809014 1228 343 aa, chain - ## HITS:1 COG:YPO0411 KEGG:ns NR:ns ## COG: YPO0411 COG1172 # Protein_GI_number: 16120745 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 322 2 323 351 381 69.0 1e-105 MKILLKNRELSAFLAILALFAVLVALNPSYFSLQTLGMIFASAQILILLATGAALVMLTR NIDVSVGSIVGLSAIAVGVALNSGYSLPVSILFALSTGALAGAFNGVLVVGLRIPAIVAT LGTLGLYRGAMLLWTGGKWIEGLPPGLKSLSEPAAVGISPLGMLVLIIAATGAWTLSRTA FGRDFYAVGDNLAAARQLGVAVNRTRMLAFTLNGMLAACAGIVFAAQIGFVPNQTGSGLE MKAIAACVLGGISLLGGTGTLVGAFLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVLLGVL VLDGRLRQALSKHQRALKYSRFQPGNKGGKHVTPFPECKKEVA >gi|333596725|gb|GL892087.1| GENE 1634 1809011 - 1810498 205 495 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 257 472 4 218 309 83 26 3e-14 MTPILDARNISKQFSGVPVLKGIDFTLLAGQVHALMGGNGAGKSTLMKIIAGVETPDSGE LSVAGESFARLTPAQAHRLGIYLVPQEPLLFPNLTVRENILFRLPRERDREKRLTEKLRQ LQCQLNLDATASTLEVADQQMVEILRGLMRNARILILDEPTASLTPGETERLFRQIRALQ DLGVGIVFISHKLPEIRQLASHVSVMRDGAVVLSGETAQFDDNALIAAMTPVSRETSLSD TQKLWLALPGNRRTQAQDFPVLRVEALTGEGFIDLSLEIYAGEIVGLAGLVGSGRTEFAE TLYGLRPVRGGRVWLESQEITADPVSSRLEKGLVYLPEDRQVSGLFLDAPIRWNTVALNE PSLWQQRKRESAVVERYHRALGIKLNHADQTVRTLSGGNQQKVLLARCLEANPLLLIVDE PTRGVDVSARADIYQLLKSVAAQNVAVLMISSDLDEFPGLADRVLVMHQGVLSGELPRHA VSLDRMMALAFGGQS >gi|333596725|gb|GL892087.1| GENE 1635 1810714 - 1811685 1265 323 aa, chain + ## HITS:1 COG:STM4073 KEGG:ns NR:ns ## COG: STM4073 COG2390 # Protein_GI_number: 16767339 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Salmonella typhimurium LT2 # 16 321 11 316 319 389 64.0 1e-108 MSDKRTAEEGRFAGLALAEEELVARVAWCYYHDGLTQNDIGERLGLPRLKISRLLEKGRQ SGVIRVQINSRYEGCLALETELQQRFGLKLVRVMPALNTPPMNVRLGIGAAQSLMGVLQP GQLLAVGFGETTMSSLQHLSGFISSQQIRLVTLSGGVGPYMTGIGQLDAACSVSMIPAPL RVSSAEVAGILKRETSVRDVILAATAADVAVVGIGSVNQRRDATILRSGYISEGEQLMYA RKGAVGDILGFFLNAEGECVEELEIHKELLGVTLDELAQLPTIVGVAGGEEKADAIYAAL KGRRINGLVTEETTARAVLALAG >gi|333596725|gb|GL892087.1| GENE 1636 1811718 - 1813292 1852 524 aa, chain + ## HITS:1 COG:ydeV KEGG:ns NR:ns ## COG: ydeV COG1070 # Protein_GI_number: 16129470 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 3 520 13 530 530 832 77.0 0 MSYLLALDAGTGSVRAVIFDLQGNQIAVGQAEWKHLSVENVPGSMEFDLDTNWRLACQCI HQALERARLSAADIQSVACCSMREGIVLYDRNGEAIWACANVDARASREVAELKEIHDYR FESEVYDVSGQTLALSAMPRLLWLAHHRPDIYRKAATITMISDWLAAKLSGELAVDPSNA GTTGMLDLFSRDWRPALLDMAGLRADILSPVKETGTVLGAVTKEAAQQSGLREGMPVVMG GGDVQLGCLGLGVVRAGQTAVLGGTFWQQVVNLPQVRTDPEMNIRVNPHVIPGMAQAESI SFFTGLTMRWFRDAFCAEEKLIAERMGMDTYSLLEEMAGRVPAGSHGVMPIFSDAMHFKQ WYHAAPSFINLSIDPEKCNKATLFRALEENAAIVSACNLAQISRFSGVTFESLVFAGGGA KGALWSQILSDVTGLPVRVPEVKEATALGCAIAAGTGAGLFADMASTGERLVKWSREFTP NPEHRELYDGMMQKWQAVYADQLGLVDSGLTTSMWQAPGLARSS >gi|333596725|gb|GL892087.1| GENE 1637 1813681 - 1815702 2341 673 aa, chain + ## HITS:1 COG:ZygjL_1 KEGG:ns NR:ns ## COG: ZygjL_1 COG1902 # Protein_GI_number: 15803622 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli O157:H7 EDL933 # 4 355 3 354 354 652 89.0 0 MSRYPSLFAPLDLGFTTLKNRVLMGSMHTGLEERPDGAERLAAFYAERARHGVALIVTGG VAPAPTGVTMEGGAVLNDASQLPHHRIVTDAVHNEGGKIALQILHTGRYSYQPNLVAPSA LQAPINRFTPHALTHDEILALIDDFARCAALAREAGYDGVEVMGSEGYLINEFLAARTNQ RDDEWGGDYARRMRFAVEVVRAVRERAGADFIIIFRLSMLDLVEGGGTFDETVQLAKAIE AAGATIINTGIGWHEARIPTIATPVPRAAFSWVTRKLKGKVSVPLVTTNRINDPQVADDV ISRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPR ACHETKMPVVPAVNKKRLAVVGAGPAGLAFAVNAASRGHSVTLFDALAEIGGQFTIARQI PGKEEFYETLRYYRRMIELTGVDLRLNQFVSATDLVGFDEVILASGIAPRTPAIEGIDHP KVLSYLDVLRDKAPVGEKVAIIGCGGIGFDTAMYLSQPGEATSQNIAEFCVEWGIDTSLS QSGGLRPEGPQLPKSPRQIVMLQRKASKPGEGLGKTTGWIHRATLLSRGVKMIPAVSYQK IDDEGLHVLIGGEPQLLNVDHVILCAGQEPKRDLADPLREAGKTVHLIGGCDVAMELDAR RAIAQGTKLALEI >gi|333596725|gb|GL892087.1| GENE 1638 1815785 - 1816921 452 378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 13 371 18 368 371 178 32 7e-43 MSHLDNGFRSLNLKRFPETDDVNPLQAWEAADEYLLQQLDETEISGPVLILNDAFGALGC ALAEHAPYSIGDSYLSELATRENLRHNDIDESSVKFLDSTADYPQAPGVVLIKVPKTMAL LEQQLRALRKVVTPDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFSA PALADAPETLSWKLEGTDWTIHNHANVFSRTGLDIGARFFMEHLPENLEGEIVDLGCGNG VIGLTLLAKNPEASVVFSDESPMAVASSRLNVETNMPDALDRCEFMINNALSGVEPFRFN AVFCNPPFHQKHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCVTI ATNNKFVVLKSVKLGRRR >gi|333596725|gb|GL892087.1| GENE 1639 1817005 - 1817508 610 167 aa, chain + ## HITS:1 COG:ECs3967 KEGG:ns NR:ns ## COG: ECs3967 COG1451 # Protein_GI_number: 15833221 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 162 13 174 179 286 87.0 2e-77 MNQLTYLQGYPEQLLSQVRDLIAGGKLGAVLEKRYPDTHDVTTDKALWQYTQDLKNRYLK SAPPINKVMYDNKIHVLKNALGLHTAISRVQGGKLKAKAEIRVATVFRNAPEAFLRMIVV HELAHLKEKEHDKAFYSLCCHMEPQYHQLEFDTRLWLTHLSLKSNAQ >gi|333596725|gb|GL892087.1| GENE 1640 1817579 - 1818577 1176 332 aa, chain + ## HITS:1 COG:ygjR KEGG:ns NR:ns ## COG: ygjR COG0673 # Protein_GI_number: 16130982 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 328 7 334 334 551 82.0 1e-157 MIRFAVIGTNWITRQFVDAAHETGKYKLTAVYSRSLEQAQSFANDYLVEHLFTSLDEMAQ SDAIDAVYIASPNSLHFPQTKLFLSHKKHVICEKPLASNIEEVESAIALARENQVVLFEA FKTASLPNFLLLQQSLPKIGKVRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI GFYCLASAVALWGEPHGVTATASLLESGVDAHGVVVLDYGDFSVTLQHSKVSDSVLPSEI QGEDGSLVIEKISECQKLSIVPRGGKAQELTQPQHINTMLYEAEVFARLVEDNEVNHPGL AISRTTAKLQTEIRRQTGVVFPADGVNVEAVA >gi|333596725|gb|GL892087.1| GENE 1641 1818830 - 1819795 1356 321 aa, chain + ## HITS:1 COG:STM3224 KEGG:ns NR:ns ## COG: STM3224 COG0861 # Protein_GI_number: 16766523 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Salmonella typhimurium LT2 # 1 318 1 318 322 495 87.0 1e-140 MHSVGTPMLWGGFAVVVLIMLAIDLFLQGRRGEHGMSVKQAAVWSLVWVSLSLLFCAAFW WYLASTEGRAVADPQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPAALQRRVLVYGVL GAIVLRTIMIFAGSWLITQFEWLLYVFGAFLLFTGVKMALAKEDDTGIGDKPLVKWIRGH LRMTDKIESEHFFVRKNGLLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS NLFAILGLRAMYFLLAGAAERFSMLKYGLSVILVFIGIKMLIVDFYHIPIAISLGVVFGI LLVTLIINTWVNRQHDKKQQV >gi|333596725|gb|GL892087.1| GENE 1642 1820006 - 1821247 1619 413 aa, chain + ## HITS:1 COG:STM3225 KEGG:ns NR:ns ## COG: STM3225 COG3633 # Protein_GI_number: 16766524 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Salmonella typhimurium LT2 # 1 413 1 414 414 632 91.0 0 MSTQSRGLFARLAQGSLVKQILVGLVLGILLAMVSKPAAEATGLLGTLFVGALKAVAPVL VLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALTAVVFSFLFPSTLHLTSAAGDITP PSGIVEVLRGLLMSMVSNPVTALMNANYIGILVWAIGLGFALRHGNETTKNLVNDMSNAV TFMVKLVIRFAPVGIFGLVSSTLATTGFDALWGYAQLLFVLVGCMLLVALVINPLLVFWQ IRRNPYPLVLTCLRESGVYAFFTRSSAANIPVNMALAEKLNLDRDTYSVSIPLGATVNMA GAAITITVLTLAAVHTLGVPVDLPTALLLSIVASLCACGASGVAGGSLLLIPLACNMFGI PNEIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDARLAKNALRS >gi|333596725|gb|GL892087.1| GENE 1643 1821333 - 1822820 1864 495 aa, chain - ## HITS:1 COG:ECs3973 KEGG:ns NR:ns ## COG: ECs3973 COG2721 # Protein_GI_number: 15833227 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli O157:H7 # 1 495 1 495 495 927 89.0 0 MQYIKIHSLDNVAVALADLAEGTEVTFDNQSVTLRQAIGRGHKFALIPIAKGENVVKYGL PIGHALADIAPGEYIHSHNTRTNLSDLDEYSYQPDFQAEEGQAADREVQIYRRANGEVGI RNELWILPTVGCVNGIARQIQTRFLKETNDAEGTDGVHLFSHTYGCSQLGDDHINTRTML QNMVRHPNAGAVLVIGLGCENNQVDAFRDTLGEFDPERVHFMVCQHQDDEVEAGIEQLHQ LYEVMRHDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPE MFGAERILMSHCRDEETFEKTVTMVNDFKQYFIAHNQPIYENPSPGNKAGGITTLEEKSL GCTQKAGASQVVDVLRYGERLKTHGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPY GGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKTMPQLLTEFVDTIVEFANGRQTCNEK NDFRELAIFKSGVTL >gi|333596725|gb|GL892087.1| GENE 1644 1822838 - 1824250 1862 470 aa, chain - ## HITS:1 COG:uxaC KEGG:ns NR:ns ## COG: uxaC COG1904 # Protein_GI_number: 16130987 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Escherichia coli K12 # 1 470 1 470 470 953 95.0 0 MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQVAENYRFKNLYDIWLKGDHY KWRAMRTNGVAERLCTGDATDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS PATADEIWDQCNELLAQDSFSARGIMKQMNVKMVGTTDDPIDSLEHHAVVAKDTSFDIKV LPSWRPDKAFNIEQATFNDYMAKLAEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVLFAESNEAELDSILARRLSGEQLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA LRNNNQRQFKLLGADVGFDSINDRPMAEELSKLLSKQNEQNLLPKTILYCLNPRDNEVLG TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT RHEYFRRILCQMIGRWVHAGEAPADLQLLGEMVKNICFNNARDYFAIELN >gi|333596725|gb|GL892087.1| GENE 1645 1824726 - 1826024 1717 432 aa, chain + ## HITS:1 COG:ECs3975 KEGG:ns NR:ns ## COG: ECs3975 COG0477 # Protein_GI_number: 15833229 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 431 41 471 472 715 90.0 0 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELHISTQQYSYIIAAYSAAYTV MQPVAGYVLDILGTKIGYAFFAVAWAVFCGATALAGSWGGLALARGAVGAAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGVLSFAWAMA WLIFYKHPRDQKKLSDEERDYIINGQESQHQTDNGKKMSVWQILGTRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCIVGGYLPPLFQRWFGVNLIV SRKMVVTMGALLMIGPGMIGLFTSPYVAIALLCIGGFAHQSLSGALITLSSDVFGRNEVA TANGLTGMAAWTASTMFALVVGALADTIGFSPLFAVLAIFDLLGAVVIWTVLKSKSADEL AKESLGGPATQS >gi|333596725|gb|GL892087.1| GENE 1646 1826222 - 1826998 838 258 aa, chain + ## HITS:1 COG:ECs3976 KEGG:ns NR:ns ## COG: ECs3976 COG2186 # Protein_GI_number: 15833230 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 258 6 263 263 448 88.0 1e-126 MEITESRRLYQQLAAELKDRIEQGVYLVGDKLPAERFIADEKSVSRTVVREAIIMLEVEG YVEVRKGSGIHVISSQAKHSPAPDESLEFASYGPFELLQARQLIESNIAEFAATQVTKQD IMKLMEIQDHARKEKCFRDSEWDLQFHVQVALATQNTALAAIVEKMWTQRVHNPYWKKLH DHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKQMLFNETSDDFEFNADRY LFADNPVVHLDTATNLAK >gi|333596725|gb|GL892087.1| GENE 1647 1827341 - 1828003 656 220 aa, chain + ## HITS:1 COG:STM3226 KEGG:ns NR:ns ## COG: STM3226 COG0586 # Protein_GI_number: 16766525 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 362 92.0 1e-100 MELLTQLLNALWAQDFETLANPSMIGMLYFVLFMILFLENGLLPAAFLPGDSLLVLVGVL CAKGAMAFPQTVLLLTIAASLGCWVSYIQGRWLGNTRIVQNWLSHLPAHYHQRAHHLFHK HGLSALLIGRFIAFVRTLLPTIAGLSGLSSTRFQFFNWMSGLLWVLILTTLGYALGKTPV FMKYEDQLMSCLMLLPVVLLVFGLVGSLVVLWKKKYGARG >gi|333596725|gb|GL892087.1| GENE 1648 1828006 - 1828389 441 127 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3550 NR:ns ## KEGG: Ent638_3550 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 127 1 127 127 201 81.0 1e-50 MVISPLALRRFSYAIVALMMFSALILLWSALQHEESTLAIRPVSQGASVPDGFSIWHHLD ANGIRFKSITPQDDVLLIKFDSSAQSAAAKAVLDRTLPQGYIIAQQDDDSHVASWMSRLR DTSHRFG >gi|333596725|gb|GL892087.1| GENE 1649 1828533 - 1828901 345 122 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3551 NR:ns ## KEGG: Ent638_3551 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 122 1 122 122 129 90.0 4e-29 MKYRITLALALFSLSTASFAMSLCQEKEQDIQREISYAEKHNNQHRIDGLKKALSEVKDN CTDSKLRADHQEKIAEQKEEIAERRQDLQEAKEKGDAEKIAKRERKLQEAQDELKALEAR DY >gi|333596725|gb|GL892087.1| GENE 1650 1828931 - 1829236 432 101 aa, chain + ## HITS:1 COG:STM3229 KEGG:ns NR:ns ## COG: STM3229 COG4575 # Protein_GI_number: 16766528 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 101 1 101 101 133 84.0 9e-32 MSKDTTSENLRAELKSLADTLEEVLNSSADKSKEEVSKLRSKAEQALKESRYRLGETGDA LAKQTREAAARADEYVRDNPWTGVGIGAAVGVVLGVLLTRR >gi|333596725|gb|GL892087.1| GENE 1651 1829239 - 1829637 453 132 aa, chain + ## HITS:1 COG:STM3230 KEGG:ns NR:ns ## COG: STM3230 COG5393 # Protein_GI_number: 16766529 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 132 1 132 132 190 82.0 6e-49 MEDPRHAQGPAKNVLGIGQRILTTLVGIAETRVRLAVVELEEEKANLFQMLLMLGLTMLF AAFGLMSLMVLIIWAIDPQYRLNAMIATTVVLLVAALIGGIWTLHKARTSTFLRHTRQEL ANDRALLEDDKS >gi|333596725|gb|GL892087.1| GENE 1652 1829634 - 1829930 163 98 aa, chain + ## HITS:1 COG:no KEGG:ECL_04500 NR:ns ## KEGG: ECL_04500 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 98 1 98 98 134 88.0 2e-30 MSDKAERQKRKAYLLSQIQQQRLDLSASRRDWLELTQRYDRGWNTLLSLRSWALVGSSVM AIWTIRHPNMLIRWARRGFGVWSAWRLVKTTLRQQQLR >gi|333596725|gb|GL892087.1| GENE 1653 1830134 - 1830526 512 130 aa, chain + ## HITS:1 COG:STM3232 KEGG:ns NR:ns ## COG: STM3232 COG2259 # Protein_GI_number: 16766531 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 130 32 161 161 220 93.0 6e-58 MKKLEDVGVLVARILMPVLFITAGWGKITGYAGTQQYMEAMGVPGFLLPLTILLEFGGGL AVLFGFLTRTTALFTAGFTLLTAFIFHSNFAEGVNSLMFMKNLTIAGGFLLLAITGPGAY SIDRLLNKKW >gi|333596725|gb|GL892087.1| GENE 1654 1830599 - 1831585 1299 328 aa, chain + ## HITS:1 COG:STM3233 KEGG:ns NR:ns ## COG: STM3233 COG0435 # Protein_GI_number: 16766532 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 328 1 328 328 610 87.0 1e-174 MGQLVDGVWQDVWYDTKSTGGRFKRSVSAFRNWLTADGAPGPSGEGGFAAEKDRYHLYVS LACPWAHRTLIVRKLKGLESLIPVSVVNPLMLENGWTFDSDFPAATGDELYHHDFLYQLY LRADPHYTGRVTVPVLWDKKNQTIVSNESAEIIRMFNTAFDAHGARAGDYYPVELRDKID ELNGWIYDNVNNGVYKAGFATSQEAYDEAVGKVFESLERLEQILGQHRYLTGDRLTEADI RLWTTLIRFDPVYVTHFKCDKHRISDYLNLHGFLRDIYQMPGIAETVNFDHIRTHYFRSH KTINPTGIISIGPWQDLDEPHGRDVRFG >gi|333596725|gb|GL892087.1| GENE 1655 1831692 - 1832057 530 121 aa, chain + ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 121 184 77.0 2e-47 MDWYLKVLRNYFGFGGRARRKEYWMFVLVNFVLIMVLGIVDKILGWEREGGEGILTTIYG VLVLLPSWAVLFRRLHDTDRSAWWLLLLLIPLIGWIVILIFNCQSGTPGENRFGPDPKAS A >gi|333596725|gb|GL892087.1| GENE 1656 1832096 - 1832998 1005 300 aa, chain - ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 295 1 295 298 525 94.0 1e-149 MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTLVTEALVPTEALFPLVDRLA AKANTQLSIITEVLAGAWERLETGRADIVIAPDMHFRSSSEINSRKLYSVMNVYVAAPDH PIHQEPEPLSEVTRVKYRGVAVADTARERPVLTVQLMDKQPRLTVTSLEDKRQALLAGLG VATMPYPFVEKDIAEGRLRVVSPEYTSEVDIIMAWRRDSMGEAKSWCLREIPKLFAHHNK >gi|333596725|gb|GL892087.1| GENE 1657 1833103 - 1833804 775 233 aa, chain + ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 233 1 233 233 426 87.0 1e-119 MITTRTAKQCGQADFGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGASFQPRTYP KVDILNLILEGEAEYRDSEGNHVQAKAGEALLISTQPGISYSEHNLSKDKTLTRMQLWLD ACPERENPLVQKIDLKGDKQQLIASPDGSKGSLQLRQQVWLHHIELKKGEQASFQLHGPR AYLQSIHGTVHAVTHTEEKEALTCGDGAFIRDEANITLVADTPLRALLIDLPV >gi|333596725|gb|GL892087.1| GENE 1658 1833926 - 1835227 1165 433 aa, chain - ## HITS:1 COG:STM3238 KEGG:ns NR:ns ## COG: STM3238 COG3681 # Protein_GI_number: 16766537 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 4 432 5 434 436 565 76.0 1e-161 MSEQINPLWNHFIRAVQEEVKPALGCTEPVSLALACAMAAGQLSGDVTRIEAWVSPNLMK NGLGVTVPGTGMVGLPIAAALGAIGGNAQAGLEVLKDVTADALARAKAMLKAGLVQVKLQ EPCDEILYSRACVYAGESSAMVTIAGGHTRVVEVVCQGETRFRLDEQQRQTNYDPLAVLS TTTLSQILEFVEQVPFDAIRFILDAGRLNDALSREGLLGNWGLHIGATLNKQRARGWMAQ DLGSDIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHVQADDERLARAL MLSHLSAIYIHYQLPRLSALCAATTAAMGAAAGMAWLMGGSYQTISMAIGSMIGDVSGMI CDGASNSCAMKVSTSVTSAWKAVMMALDDTAVTGNEGIVAHDVEQSISNLCALACRSMQA TDRQIIEIMASKV >gi|333596725|gb|GL892087.1| GENE 1659 1835248 - 1836579 1493 443 aa, chain - ## HITS:1 COG:STM3239 KEGG:ns NR:ns ## COG: STM3239 COG0814 # Protein_GI_number: 16766538 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 443 1 443 443 737 91.0 0 MNMATNSNVIVSDSPAARRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV GLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF VMLVIWMFVYSTAITNDSASYLHTFGVTDGLLSENPFYGLFLICILVAISSRGEKLLFKV SSLMVLTKLFVVAALGLSMIGLWHLANVGMLPPMGLLIKNAIITLPFTLTSILFIQTLSP MVISYRSREKSVEVARHKALRAMNIAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNISA LAIAAQFISGDGAGWVKIVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPVKKI NENTVQRGIMLFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK GVSLVIIVITGLLLCVSPFLAFS >gi|333596725|gb|GL892087.1| GENE 1660 1836852 - 1839146 2979 764 aa, chain - ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1449 90.0 0 MKVTIDTGVAPYSDAWAGFRGEEWKNAVNVRDFIQHNYTPYEGDEAFLAQATPATTALWQ KVMVGIRQENATHAPVDFDTNIATTITAHGPGYIDQELETIVGLQTDKPLKRALHPYGGI NMIRSSFEAYGREMDPQFEYLFTDLRKTHNQGVFDVYSPEMMRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGISYLVRERELQFADLQGKLERGEDLEATIRLREELAEHKRALLQIQQ MAANYGFDISRPAMNAQEAVQWVYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDMQAGR LNEVQAQELIDHFIMKIRMVRFLRTPEFDTLFSGDPIWATEVIGGMGLDGRTLVTKNSFR YLHTLHTMGPAPEPNLTILWSEQLPIAFKKYAAQVSIVTSSLQYENDDLMRADFNSDDYA IACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTEPLLDEVLDYDTV MASLDHFMDWLAVQYISALNLIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVAADS LSAIKYATVKPVRDHTGLAVDFVIEGDYPQYGNNDDRVDSIACDLVERFMKKIQALPTYR NAVPTQSILTITSNVVYGQKTGNTPDGRRGGTPFAPGANPMHGRDRKGAVASLTSVAKLP FTYAKDGISYTFSIVPQALGKDEPVRKNNLVGLLDGYFHHEAAIEGGQHLNVNVMNREML LDAIAHPENYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAM >gi|333596725|gb|GL892087.1| GENE 1661 1839162 - 1840370 1254 402 aa, chain - ## HITS:1 COG:tdcD KEGG:ns NR:ns ## COG: tdcD COG0282 # Protein_GI_number: 16131008 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli K12 # 1 402 5 406 406 630 76.0 1e-180 MIEFPVVLVINCGSSSVKFSVLDAASCDALMTGIADGINTEKAFISVNGGEPVRLAHQDY EGALAAIALELEKRNLMSSVALIGHRIAHGGDLFSESTLITEEVIEQIRQVSPLAPLHNY ANLSGVEAAERLFPGVQQVAVFDTSFHQTMAPQAYLYGLPYRYFEELGVRRYGFHGTSHR YVATQAHTLLGLSPEDSGLVIAHLGNGASICAVRNGESVDTSMGMTPLEGLVMGTRCGDV DFGAMAWIAQQTGQSFEDLERVVNKESGLLGISGISSDLRALEKAWHEGNERAALAIHTF VHRVARHIAGHAASLHRLDGVVFTGGIGENSVLIRTLVVEHLKVFGITLDEAKNALPGSA GERVISTESSRAACAVIPTNEEKMIALDALRLGKVTPAAAYA >gi|333596725|gb|GL892087.1| GENE 1662 1840401 - 1841732 1701 443 aa, chain - ## HITS:1 COG:STM3243 KEGG:ns NR:ns ## COG: STM3243 COG0814 # Protein_GI_number: 16766542 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 443 1 443 443 749 92.0 0 MSNTESIIVGQTKTSTWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAF PIAFYCHRALARLCLSGSNVSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT NTFMTFWENQLQMPALNRGVVALFLLLLMAFVIWFGKDLMVKVMSYLVFPFIASLVLISL SLIPYWNSAVIDQVNLSDIAFTGHDGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYE PEFGKEFTEQKCSKIIGRASLLMVAVVMFFAFSCLFTLSPQNMADAKAQNIPVLSYLANH FASMSGSKSTFATVLEYGASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKKKVSV GKLNTISMVFIMGSTWIVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPALAKYKG RTENIFVTVVGLLTILNIVYKLF >gi|333596725|gb|GL892087.1| GENE 1663 1841743 - 1842732 1002 329 aa, chain - ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 543 92.0 1e-154 MHITYDLPVTIEDIQDARKRLAGKIYKTGMPRSNYLSERCKGEIFLKFENMQRTGSFKIR GAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPMGAPKSKVAATRDY SAEVVLHGENFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEILEDLYDVDNVI VPIGGGGLIAGIATAIKSINPTINIIGVQSENVHGMAASYQAGEIINHRVTGTLADGCDV SRPGKLTFEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDHY IQGRKTVCIISGGNIDLSRVSQITGFVDA >gi|333596725|gb|GL892087.1| GENE 1664 1842829 - 1843749 815 306 aa, chain - ## HITS:1 COG:STM3245 KEGG:ns NR:ns ## COG: STM3245 COG0583 # Protein_GI_number: 16766544 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 306 1 306 312 489 81.0 1e-138 MNTIILPKTQHLVVFQEVIKSGSIGSAARQLGLTQPAVSKIISDIESYFGVEVMVRKNTG VKLTAAGQVLLSYAESITREMKNMVSEINSLSFSTVMDVSFGYPSLIGFTFLSGMIKKFK EVFPKARVSMYEAQLSSFLPAIRDGRLDFAIGTLSDGMQLQDLHVEPLFESEFVLVASKS RTCTGPTRLASLTHEQWVMPQTDMGYYNELLTTLQDNHISIENIVQTDSVVTIYNLVLNA DYLTVIPRDMIAPFGSDQFIVLPVEDELPVARYAAVWSKNYSIKKSASVLVELAKQYSSM NIEKRR >gi|333596725|gb|GL892087.1| GENE 1665 1844834 - 1845979 1215 381 aa, chain - ## HITS:1 COG:ECs4002 KEGG:ns NR:ns ## COG: ECs4002 COG1929 # Protein_GI_number: 15833256 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 28 408 408 572 84.0 1e-163 MKIVIAPDSYKESLSATEVAQAIEKGFREIFPDAHYVSVPVADGGEGTVEAMIAATQGTW QQAVVTGPLGEKVNACWGISGDGTTAFIEMAAASGLALVPPARRNPLITTTRGTGELILS ALDKGARNIIIGIGGSATNDGGAGMMQALGARFTDANGTEIGYGGGSLMALNHIDISGLD PRLQGCTIRVACDVTNPLVGESGASRIFGPQKGATEAMILELDASLSHYAEVIKKSLRID VNPVPGAGAAGGMGAALMAFLGAELKSGIEIVTQALNLEEHIHDCTWVLTGEGRIDSQSI HGKVPVGVASVAKKYHKPVIGIAGSLTQDVGVVHQYGIDAVFSVLTRIGSLEEAFRGASD NIYRASRNIAATLQVGMRSQG >gi|333596725|gb|GL892087.1| GENE 1666 1846036 - 1846926 1282 296 aa, chain - ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 296 4 299 299 491 94.0 1e-139 MTLKVGFIGLGIMGKPMSKNLIKAGYSLVVLDRNSDAVAEVIAAGAETATTAKAIAEQCD VIITMLPNSPHVKEVALGENGIIDGAKPGLVVIDMSSIAPLASREISEALKAKGVEMLDA PVSGGEPKAIDGTLSVMVGGDKAVFDTYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEIAR >gi|333596725|gb|GL892087.1| GENE 1667 1846948 - 1847718 991 256 aa, chain - ## HITS:1 COG:yhaF KEGG:ns NR:ns ## COG: yhaF COG3836 # Protein_GI_number: 16131018 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli K12 # 1 256 1 256 256 474 92.0 1e-134 MNDDIFPNKFKAALAAHQIQIGCWSALANPISTEVLGLAGFDWLVLDGEHAPNDISTFIP QLMALKGSHSAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETEEEAVLAVAATRYPPEGI RGVSVSHRANMFGTVPDYFAQSNKNITILVQIESLQGVDNVDAIAATDGVDGIFVGPSDL AAAFGHLGNASHPDVQRAIQHIFARAKAHGKPCGILAPVEADARRYLEWGATFVAVGSDL GVFRAATQKLADAFKK >gi|333596725|gb|GL892087.1| GENE 1668 1848085 - 1849656 1851 523 aa, chain + ## HITS:1 COG:ECs4006 KEGG:ns NR:ns ## COG: ECs4006 COG2721 # Protein_GI_number: 15833260 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli O157:H7 # 1 523 1 523 523 999 93.0 0 MADIEIRQASPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALVDI PAHGEIVRYGEVIGYAVRAIPQGSWIEESLVELPTAPPLETLPLATRVPEPLPPLEGYTF EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKLIERDLLPKYPNVDGVVGLNHLYGCG VAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLQGTEDVKAIPVDDASI VRLQDEHHVGFRSMVDDILQVAERHLEKLNKRQRETCPASELVVGTQCGGSDAFSGVTAN PAVGYASDLFVRCGATVMFSEVTEVRDAIHLLTPRAANEEVGKRLLEEMAWYDNYLDMGK TDRSANPSPGNKKGGLANVVEKALGSIAKSGQSAIVEVLSPGQRPTKRGLIYAATPASDF VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEE SIEEVGWKLFHFILDVASGRKKTFSDQWGLHNSLAVFNPAPVT >gi|333596725|gb|GL892087.1| GENE 1669 1849833 - 1850687 799 284 aa, chain + ## HITS:1 COG:STM3253 KEGG:ns NR:ns ## COG: STM3253 COG0191 # Protein_GI_number: 16766551 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 454 80.0 1e-128 MFIISSKAMLLKAQREGYAVPAFNIHNLETLQVVVETAAEMRSPLIVAGTPGTFSYAGTG NVVAIASDLAKTYNQPLAIHLDHHEDFDDIAQKIHAGIRSAMIDGSHHPFSENVALVKQV TNFCHRYDVSVEAELGRLGGQEDDLIVDSKDALYTNPQQAREFVELTGIDSLAVAIGTAH GLYTDTPKLDFERLAAIRNQVDVPLVLHGASGLSAADIRTAISLGICKVNVATELKIAFS NALKTYLSSHPAASDPRHYMVPAKNAMKEVVRKVIADCGCEGKL >gi|333596725|gb|GL892087.1| GENE 1670 1850665 - 1851993 1028 442 aa, chain + ## HITS:1 COG:STM3257 KEGG:ns NR:ns ## COG: STM3257 COG4573 # Protein_GI_number: 16766555 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Salmonella typhimurium LT2 # 20 440 1 421 423 735 84.0 0 MAVKENSEYESLLSRTGGNVKDIIARHKAGEHLGICSVCSAHPLVIEAALRFDLQTNNKV LIEATSNQVNQFGGYTGMKPADFRDFVLKIAKEVGFPQERLILGGDHLGPNCWQNEPAEA AMEKAIELIKAYVAAGFSKIHLDASMSCADDPVPLAPMVVAQRAARLCQAAEETATDAQK AALTYVIGTEVPVPGGEASSINRVHVTRVEDAEQTLETHRVAFGALGLDDAMSRVIAMVV QPGVEFDHTQIIHYQSHAAEALSGWIRQTPIVYEAHSTDYQTRQAYRALVRDHFAILKVG PALTFALREAIFALAQMEQALIAPEQRSHVLEVIDEVMLNEPGYWKKYYRPTWSQAMVDI HFSLSDRIRYYWPHPRIRQSVEKLLANLSAASLPLGLISQFMPVQFERLSMNAIPATPQN LIIDKIQDVLRAYRFGCTPEHV >gi|333596725|gb|GL892087.1| GENE 1671 1851947 - 1852474 366 175 aa, chain + ## HITS:1 COG:STM3258 KEGG:ns NR:ns ## COG: STM3258 COG1762 # Protein_GI_number: 16766556 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 21 173 1 153 154 231 79.0 6e-61 MYYAPIDLAVPLNTFDTGECMSHVFVRTGIEFEDCQQALAHIGEEMLTKGVVHATYPDAL LEREMNYPTGIALERHAVAIPHCEAVHAKSPAIYLIRPDKPVNFQQADDDGDVAVSLIIA LIVENPAAQMKLLRRLFSELQNPDTLDMLLATPAEHLADRFRTTILEPEACAQAS >gi|333596725|gb|GL892087.1| GENE 1672 1852502 - 1852786 404 94 aa, chain + ## HITS:1 COG:STM3259 KEGG:ns NR:ns ## COG: STM3259 COG3414 # Protein_GI_number: 16766557 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 163 91.0 9e-41 MKRKIIVACGGAVATSTMAAEEIKELCEAHHIELDLVQCRVTEIETYMDGADLICTTAKV DRSFGDIPVVHGMPFVSGVGIEALQQKILTILEG >gi|333596725|gb|GL892087.1| GENE 1673 1852791 - 1854164 1436 457 aa, chain + ## HITS:1 COG:STM3260 KEGG:ns NR:ns ## COG: STM3260 COG3775 # Protein_GI_number: 16766558 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Salmonella typhimurium LT2 # 1 457 1 457 457 781 94.0 0 MFTEIMRYILDLGPTVMLPIVIIIFSKLLGMKLGDCFKSGLHIGIGFVGIGLVIGLMLDS IGPAAKAMAEQFQINLHVVDVGWPGSSPMTWASQIALVAIPVAIGVNILMLVTRMTRVVN VDIWNIWHMTFTGAMLHLATGSYWLGILGVVVHAAFVYKLGDWFAKDTRDFFGLEGIAIP HGSSAYLGPIAVLVDTIINKIPGLNRIHFSADDVQKRFGPFGEPVTVGFVMGLVIGMLAG YDAKSVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKHARKRLQAKFGGQEFLIGLDPALL LGHTSVVSASLIFIPLTILIAVLVPGNQVLPFGDLATIGFFVAMAVAVHQGNLFRTLISG VIIMGITLWIATQTIGLHTQLAQNAGALKAGGLVASMDQGGSPITWLLIQLFTWQNVVGF IVIAAIYFTGVLLTWRRARTFIAAEKRAANPQSQTAS >gi|333596725|gb|GL892087.1| GENE 1674 1854208 - 1855251 645 347 aa, chain + ## HITS:1 COG:STM3261 KEGG:ns NR:ns ## COG: STM3261 COG1063 # Protein_GI_number: 16766559 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 347 1 347 347 584 81.0 1e-167 MKSVVIHAEGSVRVEERPLPFIQAADDVLVRVICSGLCGSDIPRIFAKGAHYYPITLGHE FSGYVEACGTDVADLKVGDGVACVPLLPCFSCPECEKGYYSLCKHYQFVGSRSEGGNAEY VVVKRANLFRLPETMTIEDGAFIEPITVGLHAFHLASGCEGKNVIIVGAGTIGLLAMQCA LALGASSVTAIDINDEKLALASRLGATRVFNSRSLSADDIFSALSESRFDQLVLETAGTP QTVTLAIDIAGPRAQLALVGTLHHDLHLPAATFGKILRKELTLLGSWMNYSAPWPGEEWE MAARLLADKKLQLAPLVAHSGDSESFAQAVQALNGSPMQGKIMLRFA >gi|333596725|gb|GL892087.1| GENE 1675 1855364 - 1856137 610 257 aa, chain + ## HITS:1 COG:STM3262 KEGG:ns NR:ns ## COG: STM3262 COG1349 # Protein_GI_number: 16766560 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 420 86.0 1e-117 MNSFERRNKIVDLVNTHGSVMVLDLSNMFGISEVTIRTDLRLLEEKGLVTRFHGGAARPG SNLAESESQEVVLEDRYQLASDPKKRIAQAAAAMIEEGMTIILDSGSTTMLIAEALTKKA NITVITNSLPAAFALSENKDITLVVCGGTVRHKTHSMHGTIAERSLTGISADLMFVGADG IDATNGITTFNEGYSISSVMAAAAHKVVAVLDASKFNRRGFNQVLPMEKIDCVITDDGIG KQEKELLGKTGTEIITV >gi|333596725|gb|GL892087.1| GENE 1676 1856151 - 1857131 505 326 aa, chain - ## HITS:1 COG:FN0971 KEGG:ns NR:ns ## COG: FN0971 COG3177 # Protein_GI_number: 19704306 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 6 319 7 324 330 265 43.0 6e-71 MSRYQPPFTITPFILNQVVEIGELLGHWAAHSGRTSPLLRKENRIRTIQASLAIEHNSLT TGQVTAIMDGKRVLAPEKDIQEVRNAILAYEKLPEWKPWKLNDLLSAHRLLMLGLVDHPG KLRNGDVGVYRGNQLVHMAPPASQMNRLIDDLLSWLKQTDLHPLIASSVFHYEFEFIHPF SDGNGRMGRLWQTLILSQWRAELAWLPVETLIHFQQARYYQILGQCDRASDCTAFVAFML QNLAEALREGIDMTSAMSEKMSEELSEKELTILELLTVQPQMTAVMLASVLGVTSRTAER YLRSLQTKGKLKRLGARKGGSWQVMR >gi|333596725|gb|GL892087.1| GENE 1677 1857137 - 1858000 1029 287 aa, chain - ## HITS:1 COG:ECs4027 KEGG:ns NR:ns ## COG: ECs4027 COG0313 # Protein_GI_number: 15833281 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 505 93.0 1e-143 MKQHETADNSQGQLYIVPTPIGNLSDITQRALTVLQAVDLIAAEDTRHTGLLLQHFAINA RLFALHDHNEQQKAETLVAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLP GPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDVLKDLEAEPRTLIFYESTHRLLESLE DMVTVWGEGRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQED ALPADALRTLALLQTELPLKKAAALAAEIHGVKKNALYKYALEQQGE >gi|333596725|gb|GL892087.1| GENE 1678 1858062 - 1860200 2097 712 aa, chain + ## HITS:1 COG:STM3264 KEGG:ns NR:ns ## COG: STM3264 COG3107 # Protein_GI_number: 16766562 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Salmonella typhimurium LT2 # 1 712 1 680 680 889 73.0 0 MVPLTFLRKKAAHSVPLLLAALIFTGCGTQAPDQSTAHMQGSAQADSGFYLQQMSQSTND TRINWQLLAIRALLKEGKTQQAAELFSQLPQELNDDQRREQTLLSAELKVAQKDYDGAKK ILGTIDLNTLDKNQQARFWQAGITAEQGRPSLTLLRALIAQEPLLAGADKQKNIDATWQA LASMTPDQAKTLVINADENVLQGWLDLQQMWFNNRSDPDMLKAGITDWQKRYPQNPGAKM LPTQLVNVQNFKPASTSKIALLLPLNGQAAVFGRAIQQGFEAAKNGTTAVTGSAVPAQAA QAANVNDVVSPSAAETEDLTTAQTPAQGTMQNPVTAPTTQPATPAPAATQAPAETPAAAT AEQPQPQTTQPEQQPAAQPQAVAATSANPGAELKIYDTSAQPLDQVLAQVQQDGASIVVG PLLKNNVEALMKSNTTLNVLALNQPEQVQNRANICYFALSPEDEARDAARHIHEQGKQAP LLLIPRSTLGDRVANAFAQEWQTLGGGVVLQQKFGSASELRAGVNGGAGIALNGSPVSAS LPQQQSVTIGGLTIPAPPTDAQISGGGKVDSAYIVATPEEIAFIKPMIAMRNGSQSGATL YASSRSAQGTAGPDFRLEMDGLQYSEIPMLAGSNPQLMQQALGAVRNDYSLARLYAMGVD AWALANHFTQMRQVPGFELNGNTGDLTADQDCVINRKLSWLKYQQGQIVPAS >gi|333596725|gb|GL892087.1| GENE 1679 1860158 - 1860553 238 131 aa, chain + ## HITS:1 COG:ECs4029 KEGG:ns NR:ns ## COG: ECs4029 COG0792 # Protein_GI_number: 15833283 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 129 1 129 131 193 73.0 8e-50 MAQIPAGADCPGQLSRKQTGDAWELTARRWLEGKGLRFVAANVRGRGGEIDLIMKDGQTI VFVEVRYRQSSRFGGAAASVTLAKQQKLLQTAHLWLARHNGSFDTVDCRFDVVAFTGNAI DWLKNAFGEDA >gi|333596725|gb|GL892087.1| GENE 1680 1860575 - 1861165 427 196 aa, chain + ## HITS:1 COG:STM3266 KEGG:ns NR:ns ## COG: STM3266 COG0279 # Protein_GI_number: 16766564 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Salmonella typhimurium LT2 # 1 196 1 196 196 367 98.0 1e-102 MLERIKVCFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEIYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDD >gi|333596725|gb|GL892087.1| GENE 1681 1861175 - 1861750 675 191 aa, chain + ## HITS:1 COG:STM3267 KEGG:ns NR:ns ## COG: STM3267 COG2823 # Protein_GI_number: 16766565 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 268 89.0 4e-72 MKVLSALAVVMSALLLQGCIAAAVVGTAAVGTKAATDPRTVGTQVDDGTLELRVNSALSK DEQIKKEARINVTAYQGKVLLAGQAPNPELASRAKQIAMGVEGTAEVFNEIRQGQPIGLG TASSDTWITTKVRSQLLGTDQVKSSNVKVTTENGEVFLLGLVTEREGKAAADIASRVSGV KHVTTAFTYIK >gi|333596725|gb|GL892087.1| GENE 1682 1861801 - 1862838 1198 345 aa, chain - ## HITS:1 COG:ECs4032 KEGG:ns NR:ns ## COG: ECs4032 COG0701 # Protein_GI_number: 15833286 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 345 1 345 346 497 82.0 1e-140 MTGQSSSQAATPVQWWKPALFFLVVIIGLWYVKWQPYYGKAFTAADTHSIGKSILAQADS SPLRAAWDYAMVYFLAVWKAAVLGVLLGSLIQVLIPRNWLVKTLGQPRLQGTLLGTIFSL PGMMCSCCAAPVAAGMRRQRVSMGGALAFWMGNPLLNPATLVFMGFVLGWHFAFIRLAAG LLTVVLVATLVQHLVKDNEAGPASVELDVSEPQDSFFARWGKALWQLFWSTIPVYILAVL VLGAARVWLFPHADGAIDNTLMWVIAMAVAGCLFVIPTAAEIPIIQTMMLAGMGTAPALA LLITLPAVSLPSLIMLRKSFPAKALWLTAGLVALSGVIVGSMALV >gi|333596725|gb|GL892087.1| GENE 1683 1862879 - 1863523 747 214 aa, chain - ## HITS:1 COG:STM3268 KEGG:ns NR:ns ## COG: STM3268 COG0702 # Protein_GI_number: 16766566 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 1 211 12 222 222 335 77.0 5e-92 MSQVLITGATGLVGRHLLRLLIQDRHINYIAAPTRRPLLDITGVYNPHDPQLTDALAQVQ DPIDIAFCCLGTTRREAGSKEAFVHADYTLVVDTALTAKKLGAKHFLVVSAHGANAGSPF FYNQVKGKMEEALIAQKWERLTIVRPSMLMGHRDERRFNESFFAPLFRILPGNWKSIEAR DVALAMLKEALAPSQEGVNIIPSAKLREIAQGEA >gi|333596725|gb|GL892087.1| GENE 1684 1863652 - 1864170 564 172 aa, chain + ## HITS:1 COG:ECs4034 KEGG:ns NR:ns ## COG: ECs4034 COG0693 # Protein_GI_number: 15833288 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 172 15 186 186 298 87.0 3e-81 MSKKIAVLITDEFEDSEFTSPAEAFRKAGHEVVTIEKEAGKTVKGHKGEASVTIDESIDN VSPSDFDALLLPGGHSPDSLRGDERFVTFTRDFVGTGKPVFAICHGPQLLISAEVVRGRK LTAVKPIVIDLKNAGAEFYDQEVVNDNDQLITSRTPDDLPAFNREALRLLGA >gi|333596725|gb|GL892087.1| GENE 1685 1864150 - 1864584 525 144 aa, chain - ## HITS:1 COG:yhbP KEGG:ns NR:ns ## COG: yhbP COG3787 # Protein_GI_number: 16131046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 144 1 147 147 233 78.0 8e-62 METLAAINRWLAKQHVVTWCVCKDEEMWCANAFYYYDPERVAFYVMSEDKTRHAQMSGPQ AKVAGTVNGQPKTVALIRGVQFKGEIRRLDGEESDAQRKRYTRRFPVAAALKAPVWEIRL DELKFTDNTLGFGKKLHWLRAEQA >gi|333596725|gb|GL892087.1| GENE 1686 1864599 - 1864928 120 109 aa, chain + ## HITS:1 COG:STM3271 KEGG:ns NR:ns ## COG: STM3271 COG2827 # Protein_GI_number: 16766569 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Salmonella typhimurium LT2 # 17 105 9 97 105 140 84.0 6e-34 MLWCVHLNILNLSTVCWFLYLVRTADNALYTGITTDVARRFLQHQTGKGAKALRGKGELH LAFSAAVGDRSLALRLEYRIKQLTKRQKERLVTGDGSFEALRESLIKSD >gi|333596725|gb|GL892087.1| GENE 1687 1864915 - 1865418 731 167 aa, chain - ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 285 85.0 3e-77 MLIRVEIGIDAPGIDALLRRSFAGDAEAQLVHDLREDGLITLGLVATDDEGQVVGYVAFS PVIVQGEELQWVGMAPLAVDENYRGQGLARQLVYEGLDSLNEFGYAAVVVLGDPAFYERL GFEPAAKHDLRCHWPGTETSFLVHPLADDALDGVNGLVEYHDHFNRF >gi|333596725|gb|GL892087.1| GENE 1688 1865412 - 1865891 527 159 aa, chain - ## HITS:1 COG:ECs4038 KEGG:ns NR:ns ## COG: ECs4038 COG3154 # Protein_GI_number: 15833292 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Escherichia coli O157:H7 # 1 159 16 174 174 264 86.0 6e-71 MLSVPVKLAPFALKRQVLEQVLSWQFRQALQDGELEFLEGRWLQIEVRDIGLRWFTSVEN DRLIVSESASADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAI ELEQMPKALRMMLMQMADFVEAGLKTPPDSKHTSVGEPC >gi|333596725|gb|GL892087.1| GENE 1689 1866158 - 1867153 1042 331 aa, chain + ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 658 96.0 0 MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVNFVHQHRRK LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA TNEEAVRFYHRHFNVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDG ERYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCMADPQ NYAPQAAWMETLGAMSEGTQTTLGAYHRKWQ >gi|333596725|gb|GL892087.1| GENE 1690 1867161 - 1868039 1161 292 aa, chain + ## HITS:1 COG:ECs4040 KEGG:ns NR:ns ## COG: ECs4040 COG0826 # Protein_GI_number: 15833294 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 292 7 298 298 567 93.0 1e-161 MKYSLGPVLYYWSKETLEDFYQQAATSSADVIYLGEAVCSKRRATKVGDWLDMAKSLAGS GKQVVLSTLALVQASSELGELKRYVENGEFLLEASDLGVVNLCAERKLPFVAGHALNCYN AVTLRLLLKQGMTRWCMPVELSRDWLANLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC FTARSEDRPKDECETCCIKYPNGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELASMHGL VDMVRLSPLDTGVFAMLDAFRANENGASPLPLTANSDCNGYWRRLAGLELQA >gi|333596725|gb|GL892087.1| GENE 1691 1868118 - 1869125 1160 335 aa, chain + ## HITS:1 COG:STM3276 KEGG:ns NR:ns ## COG: STM3276 COG2141 # Protein_GI_number: 16766574 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 335 1 335 335 637 94.0 0 MTDKTIPFSVLDLAPIPQGSSAREAFTHSLDLAQLAEKRGYHRYWLAEHHNMVGIASAAT SVLIGYLAANTTTLHLGSGGVMLPNHAPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPT MRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLA AQLGLPFAFASHFAPDMLHQALHLYRTHFKPSERLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPVENMHQLWSASEQYGVQQALSMSLVGDKAKVRHGLEAVLR ETQADEIMVNGQIFDHQARLHSFDLAMQVKEELVG >gi|333596725|gb|GL892087.1| GENE 1692 1869204 - 1870361 526 385 aa, chain - ## HITS:1 COG:SMb20905 KEGG:ns NR:ns ## COG: SMb20905 COG2801 # Protein_GI_number: 16264949 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 7 378 2 370 390 249 38.0 9e-66 MPWTETRPMQHLDFIRACHAGTDSFSALCRLFGISRKTGYKWLQRFDPSDLSSLSDRSRA PHSHSRTVPDDIAAQLTALRQKHPDWGPKKLRMWLLNHHADFTVPAASTIGDILKREGLV PDKKRKRRTPGNRQPLTTISENNQVWSADFKGKFRLLSREYCHPFTLTDNHSRYLLSCRG TDRESEPFVRQCLTDAFLEYGLPEVLRTDNGQPFAGTGIAGLSRLAVWLIRLGIRPERIR KGHPEENGRHERMHRSLKSAVNHGNTFMTMEEQQRWFSDYREEFNHERPHEALAGATPGM VWQPSCRQWDGRVPDYAYPEGGTVYRVKSRGTLYMGKKGTVFLSEALTDEYIMLEERDDG LEAIIFNGITLAYYDRKTQSVLRID >gi|333596725|gb|GL892087.1| GENE 1693 1870522 - 1871766 1668 414 aa, chain - ## HITS:1 COG:STM3279 KEGG:ns NR:ns ## COG: STM3279 COG0814 # Protein_GI_number: 16766577 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 414 1 414 414 667 93.0 0 MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSLAALVFTWFCMLHSGL MILEANLNYRIGSSFDTITRDLLGKGWNLVNGLSIAFVLYILTYAYISASGSILHHTFSE MSLNVPARLAGLCFALGVAFIVWMSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVTPATL FNVAEVNTSYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLVYGTLLALGLY VIWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLG VTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPIVGGLLWPNGFLYAIGYAGLAATIWAA IVPALLARKSRKRFGSPKFRVWGGKPMIALILVFGIGNAVVHVLSSFNLLPVYQ >gi|333596725|gb|GL892087.1| GENE 1694 1871909 - 1873801 2050 630 aa, chain - ## HITS:1 COG:STM3280 KEGG:ns NR:ns ## COG: STM3280 COG0513 # Protein_GI_number: 16766578 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 628 18 643 646 991 91.0 0 MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRQERGGE DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR GEPRRFSGERRENRGPRREEGTSRRRFGDA >gi|333596725|gb|GL892087.1| GENE 1695 1873982 - 1874866 715 294 aa, chain - ## HITS:1 COG:STM3281 KEGG:ns NR:ns ## COG: STM3281 COG4785 # Protein_GI_number: 16766579 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Salmonella typhimurium LT2 # 1 294 1 294 294 550 97.0 1e-156 MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDE RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFD SVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYIVEQKLDEK QAKEALKQRFEKSDKEQWGWNIVEFYLGNISEATLMERLKADATDNTSLAEHLSETNFYL GKYYLSLGDMDSATALFKLAVANNVHNFVEHRYALLELSLLGQEQDDLAESDQQ >gi|333596725|gb|GL892087.1| GENE 1696 1874977 - 1877115 187 712 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 [Planctomyces limnophilus DSM 3776] # 621 712 433 529 557 76 44 4e-12 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKESKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINDLVKEAGKPRWDWQPEAAND ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSEVTATLVAEDETLDANEIGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQQGE >gi|333596725|gb|GL892087.1| GENE 1697 1874977 - 1877115 183 712 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|56963639|ref|YP_175370.1| 30S ribosomal protein S1 [Bacillus clausii KSM-K16] # 595 691 151 258 384 75 44 1e-11 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKESKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINDLVKEAGKPRWDWQPEAAND ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSEVTATLVAEDETLDANEIGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQQGE >gi|333596725|gb|GL892087.1| GENE 1698 1877358 - 1877627 443 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313237|ref|YP_001178311.1| 30S ribosomal protein S15 [Enterobacter sp. 638] # 1 89 1 89 89 175 100 8e-42 MSLSVEAKAKIVSEFGRGTNDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYTALIERLGLRR >gi|333596725|gb|GL892087.1| GENE 1699 1877782 - 1878732 1023 316 aa, chain - ## HITS:1 COG:ECs4047 KEGG:ns NR:ns ## COG: ECs4047 COG0130 # Protein_GI_number: 15833301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Escherichia coli O157:H7 # 1 313 1 313 314 568 90.0 1e-162 MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPVTFSAEQLDAALDSFRGDTL QVPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGDELELEVHCSKGTYI RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLHALVEQAQAQGMAPADLLDPL LMPMDSPAADFPVVNLPLTSSVYFKNGNPVRTTGAPLEGLVRVTEGEEGKFIGMGEMDGE GRVAPRRLVVEYPLEA >gi|333596725|gb|GL892087.1| GENE 1700 1878732 - 1879136 589 134 aa, chain - ## HITS:1 COG:ECs4048 KEGG:ns NR:ns ## COG: ECs4048 COG0858 # Protein_GI_number: 15833302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Escherichia coli O157:H7 # 1 134 1 133 133 228 95.0 2e-60 MAKEFGRPQRVAQEMQKEIALILQREIKDPRVGMMTTVSGVEMSRDLAYAKVFVTFLNDQ DEDAVKNGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD DERRVNPADDSKED >gi|333596725|gb|GL892087.1| GENE 1701 1879243 - 1881930 2921 895 aa, chain - ## HITS:1 COG:STM3286 KEGG:ns NR:ns ## COG: STM3286 COG0532 # Protein_GI_number: 16766584 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Salmonella typhimurium LT2 # 1 895 1 892 892 1318 94.0 0 MTDVTVKSLAAEIQTSVDRLVQQFADAGIPKSADDSVTAQEKQTLLAHLNREHGSTPDKL TLQRKTRSTLNIPGTGGKSKSVQIEVRKTRTFVKRDPQEAERLAAEEQAQREAEEQAQRE AEATAKREAELKAEREAAEKAKRDAGEKAKRDAAEKDKVSNQQTDEMTKTAQAEKARREN EAAELKRKAEEEARRKLEEEARRVAEEARRMAEENEKNGVNTAEPTEDTSDYHVTTSQHA RQAEDDNDREVEGGRGRTRSAKAARPAKKGNKHAESKADREEARAAVRGGKGGKRKGSAL QQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQ LVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTK VASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGV MPQTIEAIQHAKAAQVPLVVAVNKIDKPEADMDRVKNELSQYGVMPEEWGGEAQFIPVSA KAGTGIDDLLNAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGD IVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVAL YRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDE VKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIDAESLDLRYYSVIYNLI DEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNV VIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA >gi|333596725|gb|GL892087.1| GENE 1702 1881955 - 1883457 1044 500 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 487 9 483 537 406 44 1e-111 MNKEILAVVEAVSNEKSLPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFR RWVIVEEVTQPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVRE AERALVVDQFRDQEGEIITGVVKKVNRDNISLEIKSEGLPGNAEAVILREDMLPRENFRP GDRIRGVLYAVRPEARGAQLFVTRSKPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRAK IAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVAS IVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAA IDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALT TLALAQEESLGDKKPADDLLNLEGLDRAIAFKLAARGVCTLEDLAEQGVDDLADIEGLTD EKAGELIMAARNICWFGDEA >gi|333596725|gb|GL892087.1| GENE 1703 1883486 - 1883908 352 140 aa, chain - ## HITS:1 COG:STM3288 KEGG:ns NR:ns ## COG: STM3288 COG0779 # Protein_GI_number: 16766586 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 140 1 140 140 268 96.0 2e-72 MITAPVEALGYELVGIEFVRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITV AYNLEVSSPGLDRPMFTAEHYVRFTGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVE GKDEVFALSNIQKANLVPHF >gi|333596725|gb|GL892087.1| GENE 1704 1884509 - 1885855 1784 448 aa, chain + ## HITS:1 COG:STM3290 KEGG:ns NR:ns ## COG: STM3290 COG0137 # Protein_GI_number: 16766587 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Salmonella typhimurium LT2 # 1 447 23 469 469 880 95.0 0 MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRA MEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKE DGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACG FDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDENVKIPAEEVTVR FERGHPVALNGKTFSDDVELMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDPQALMLRDALQRWVASAITGEV TLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLF NYVENGLLSANSGNGLPQVENLEHSDKK >gi|333596725|gb|GL892087.1| GENE 1705 1886105 - 1886437 302 110 aa, chain - ## HITS:1 COG:STM3293 KEGG:ns NR:ns ## COG: STM3293 COG1314 # Protein_GI_number: 16766589 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Salmonella typhimurium LT2 # 1 110 1 110 110 171 90.0 3e-43 MYEALLVIFLIVAIALVALIMLQQGKGADMGASFGAGASGTLFGSSGSANFMTRTTAILA TLFFIISLVLGNINSNKTSKGSEWENLSAPAKTEQTQPAAPAKPTSDIPQ >gi|333596725|gb|GL892087.1| GENE 1706 1886660 - 1887997 1821 445 aa, chain - ## HITS:1 COG:STM3294 KEGG:ns NR:ns ## COG: STM3294 COG1109 # Protein_GI_number: 16766590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Salmonella typhimurium LT2 # 1 444 1 444 445 798 94.0 0 MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSASFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK LPDDVEEAIEAEMEKEITCVDSAELGKANRIVDAAGRYIEFCKGTFPNELSLAHLKIVVD CANGATYHIAPNVFRELGAKVITIGCEPDGLNINEEVGATDVRALQARVLAEKADLGIAL DGDGDRVIMVDHEGNKVDGDQILYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP FVRAKVGDRYVLEKLQEKGWRIGAENSGHVILLDKTTTGDGIVAALQVVAAMARNHMSLH DLCSGMKMFPQILVNVRFTAGKGDPLENDNVKAVMADVEAALGSRGRVLLRKSGTEPLIR VMVEGEDEAQVTEFAHRIADAVKAA >gi|333596725|gb|GL892087.1| GENE 1707 1887990 - 1888838 815 282 aa, chain - ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 16 297 297 518 92.0 1e-147 MKLFAQDSHLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGE STRPGAAEVSVEEELARVVPVVEAIAQRFEVWISVDTSKPEVIREVARVGAHIINDIRSL TEPGAIEAAAETGLPVCLMHMQGQPKTMQEAPKYEDVFADVTRFFIEHIERCERAGIAKE KLLLDPGFGFGKNLSHNYALLARLSEFHQFGLPLLVGMSRKSMIGQLLNVGPSERLSGSL ACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLAAKENKRYE >gi|333596725|gb|GL892087.1| GENE 1708 1888937 - 1890880 1685 647 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 599 1 597 636 653 56 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREIN VTKKDSNRYTTYIPVNDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVGELVEYLREPSRF QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFS GADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEE IIYGAEHVSTGASNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHM SDETARIIDQEVKALIERNYGRARQILNDNMDILHSMKDALMKYETIDAPQIDDLMARRE VRPPAGWEDPGASNNSDNNGTPRAPRPVDEPRTPNPGNTMSEQLGDK >gi|333596725|gb|GL892087.1| GENE 1709 1890974 - 1891600 410 208 aa, chain - ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 1 208 1 208 209 396 96.0 1e-110 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA APGGWSQYAVTQIGGTGRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLDRVGDSKVQV VMSDMAPNMCGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFEEYLKEIRS LFAKVKVRKPDSSRARSREVYIVATGRK >gi|333596725|gb|GL892087.1| GENE 1710 1891689 - 1892021 446 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Erwinia tasmaniensis Et1/99] # 14 110 1 97 97 176 91 3e-42 MNRFQSQRKQKYTMNLSTKQKQHLKGLAHPLKPVVMLGNNGLTEGVLAEIEQALEHHELI KVKIASEDRDTKNLIVEAIVRETGACNVQVIGKTLVLYRPSKERKISLPR >gi|333596725|gb|GL892087.1| GENE 1711 1892173 - 1892649 664 158 aa, chain - ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 280 94.0 6e-76 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG RIKDIEAKLSNAQVIDITKMPNNGRVIFGSTVSVLNLDNDEEQTYRIVGDDEADFKQNLI SVNSPIARGLIGKEQDDVVTIRTPGGEVEYEIIKVEYL >gi|333596725|gb|GL892087.1| GENE 1712 1892878 - 1894311 1113 477 aa, chain + ## HITS:1 COG:dacB KEGG:ns NR:ns ## COG: dacB COG2027 # Protein_GI_number: 16131072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Escherichia coli K12 # 1 477 1 477 477 883 90.0 0 MRFSSFIIGLTTSITFTVQAANVDEYINQLPAGANLALMVQKVGAQAPEIDYHSQQMALP ASTQKVITALAALLQLGPDFRFTTTLETRGNVEGGELKGDLIARFGGDPTFKRQDVRNMV AVLKKSGVTKIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS APKPNDLAFIRVASYYPVTMFSQVRTLAKGSPEAQYCELDVVPGDLNRYTLTGCLTQRAD PLPLAFAIQDGAGYAGAIFKDELKQAGITYTGTLLRQTQVNEPGTVIASKQSAPLHDLLK IMLKKSDNMIADTVFRMIGHARFGVPGTWRAGSDAVRQILRQQAGIDLGNTIAVDGSGLS RHNLISPATMMQVLQYIAQHDAELNFITMLPLAGHDGSLQYRAGLHAAGVDGKVSAKTGS LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN >gi|333596725|gb|GL892087.1| GENE 1713 1894314 - 1894976 791 220 aa, chain + ## HITS:1 COG:YPO3507 KEGG:ns NR:ns ## COG: YPO3507 COG0745 # Protein_GI_number: 16123653 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 218 1 218 220 312 74.0 4e-85 MKLLIVEDDLLLQEGLALALGNEGYALDCAATAAEADALIQSGEYSLVILDLGLPDKDGA TLLCQWRRRGVENPVLILTARDAIEDRINGLDSGADDYLVKPFALAELQARVRALIRRYQ GHSDNLLTDGDITLNLQTQQVLRQSQPVEVTPKEFALLTRLIMRSGQTVHRETLQQDIYS WQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLESQK >gi|333596725|gb|GL892087.1| GENE 1714 1894982 - 1896016 746 344 aa, chain + ## HITS:1 COG:YPO3508 KEGG:ns NR:ns ## COG: YPO3508 COG0642 # Protein_GI_number: 16123654 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 17 341 20 349 355 384 62.0 1e-106 MRRRLMVLLAVILLFFQLISVIWLWHESREQIGFLVNETLSAKARNNHVEKEIREAIASL LVPSLVMVGFTLFFSFWAVTWITRPLNKLRDSLANRSADNLTPLPMYSDMEEIGAVTTSL NQLLARLDHTIQQERLFTADAAHELRTPLAGIRLHLELMAQSGSPQATPLISRIDQLMHT VEQLLMLARAGQAMASGHYDTVNWTETIIAPLSLEHEAKEHTVIWPAHSALTVQGDAVLL RLMLRNLLENAARYSPAGTTIEVALTATEGGTRISVTDQGPGIDEAHRQSITEPFRRLDQ RYGGSGLGLSIVQRIVQLHHGHLTLENGAEGGLIASCWLPAKIG >gi|333596725|gb|GL892087.1| GENE 1715 1896050 - 1897225 1566 391 aa, chain - ## HITS:1 COG:yhbZ KEGG:ns NR:ns ## COG: yhbZ COG0536 # Protein_GI_number: 16131073 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 390 1 389 390 651 94.0 0 MKFVDEATILVVAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVWLEADENLNTLIDYR FEKSFRAERGQNGQSRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLMVAKG GWHGLGNSRFKSSVNRTPRQKTMGTPGDKRDLQLELMLLADVGMLGMPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV LLHLIDIDPIDGSDPVENARIIIGELEKYSEKLAQKPRWLVFNKIDLMDKAEAEAKAKAI ADAMGWEDKYYLISAASQVGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ LEELEAEEDDEDWDDDWDEDDEEGVEFIYKH >gi|333596725|gb|GL892087.1| GENE 1716 1897241 - 1898206 749 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 303 1 300 306 293 49 2e-77 MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPPTVVFYRFLMASIGLGAILAVKGKL PPLRIFRKPRWLVLLAIATGGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL KEKMRGTQIIGASMLLCGLVMFFNTSLIEIFTRLTDYTWGVIFGVGAATVWVSYGVAQKV LLRRLASQQILFLLYTLCTLALLPLAKPGVITQLSDWQLACLIFCGLNTLVGYGALAEAM ARWQAAQVSALITLTPLFTLLFSDLLSMAWPDVFVKPMLNLLGYLGAFVVVAGAMYSAIG HRLWGRWRKNEAVVVVPRSGE >gi|333596725|gb|GL892087.1| GENE 1717 1898302 - 1898559 436 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157148757|ref|YP_001456076.1| 50S ribosomal protein L27 [Citrobacter koseri ATCC BAA-895] # 1 85 1 85 85 172 98 5e-41 MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGTNVGCGRDHTLF AKADGKVKFEVKGPNNRKYISIVAE >gi|333596725|gb|GL892087.1| GENE 1718 1898579 - 1898890 525 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|209910220|ref|ZP_03284704.1| hypothetical protein ENTCAN_04541 [Enterobacter cancerogenus ATCC 35316] # 1 103 1 103 103 206 100 2e-51 MYAVFQSGGKQHRVSEGQTVRLEKLDIATGESVEFAEVLMIANGEEVKIGVPFVDGGVIK AEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA >gi|333596725|gb|GL892087.1| GENE 1719 1899148 - 1900119 1060 323 aa, chain + ## HITS:1 COG:STM3305 KEGG:ns NR:ns ## COG: STM3305 COG0142 # Protein_GI_number: 16766600 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 323 1 323 323 597 93.0 1e-170 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAILAARAVG YQGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAF QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQ CSGILAGCSEAQEKGLQDYGRYLGTAFQLIDDLLDYSADGETLGKNVGDDLNEGKPTLPL LHAMRNGTPEQAKMIREAIEQGNGRHLLEPVLETMAICGSLEWTRQRAEEEADKAIAAIQ VIPDSPWRDALIGLAHIAVQRDR >gi|333596725|gb|GL892087.1| GENE 1720 1900349 - 1900447 70 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTKFIDWHSADIIAALRKKGTSLAANHVVMG >gi|333596725|gb|GL892087.1| GENE 1721 1900699 - 1901958 1446 419 aa, chain - ## HITS:1 COG:murA KEGG:ns NR:ns ## COG: murA COG0766 # Protein_GI_number: 16131079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Escherichia coli K12 # 1 419 1 419 419 766 93.0 0 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLGQL GTKVERNGSVWIDASNVNNFSAPYELVKTMRASIWALGPLVARFGQGQVSLPGGCAIGAR PVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGTT IIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLV AAAISGGKIVCRNAQPDTLDAVLAKLRDAGADIEIGEDWISLDMHGQRPKAVNVRTAPHP AFPTDMQAQFTLLNLVAEGTGFITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKL SGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE >gi|333596725|gb|GL892087.1| GENE 1722 1902009 - 1902263 293 84 aa, chain - ## HITS:1 COG:STM3308 KEGG:ns NR:ns ## COG: STM3308 COG5007 # Protein_GI_number: 16766603 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Salmonella typhimurium LT2 # 1 84 14 97 97 157 90.0 3e-39 MENNEIQTVLMNALSLQEAHVSGDGSHFQVIAVGEMFDGMSRVKKQQAVYAPLMEYIADN RIHALSIKAFTPQEWARDRKLNGF >gi|333596725|gb|GL892087.1| GENE 1723 1902391 - 1902684 364 97 aa, chain - ## HITS:1 COG:STM3309 KEGG:ns NR:ns ## COG: STM3309 COG3113 # Protein_GI_number: 16766604 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Salmonella typhimurium LT2 # 1 97 1 97 98 120 64.0 7e-28 MSQQLSWARDGETLTLTGELDQDLLNPLWDARHNVMQGVTLIDLHGVTRVDTAGIALLAH LVATGKKQGSNVALTGVSDNVITLAQLYNLPQDVLPR >gi|333596725|gb|GL892087.1| GENE 1724 1902684 - 1903319 1032 211 aa, chain - ## HITS:1 COG:STM3310 KEGG:ns NR:ns ## COG: STM3310 COG2854 # Protein_GI_number: 16766605 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 384 93.0 1e-107 MFKRLLMVAMLVIAPLTAAHAADQSNPYKLMDEAAKKTFDRLKNEQPKIRSNPDYLRDVV DQELLPYVQIKYAGALVLGRYYKDATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA PEQPLGDATIIPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE WSDLLRTKGIDGLTAQLQSISRQKITLDEKK >gi|333596725|gb|GL892087.1| GENE 1725 1903338 - 1903886 558 182 aa, chain - ## HITS:1 COG:STM3311 KEGG:ns NR:ns ## COG: STM3311 COG1463 # Protein_GI_number: 16766606 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 181 1 182 183 274 82.0 5e-74 MQTRKNEIWVGVFLLLALLAALFICLRAADITSVRAEPTYRVYATFDNIGGLKARSPVRI GGVVIGRVADITLDEKTYLPRVAMDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFED PELGTTILKDGSVIQDTKSAMVLEDMIGQFLYNSKGDDKKSDDAPAQSEDHTNVEPTPGA TN >gi|333596725|gb|GL892087.1| GENE 1726 1903891 - 1904673 855 260 aa, chain - ## HITS:1 COG:ECs4073 KEGG:ns NR:ns ## COG: ECs4073 COG0767 # Protein_GI_number: 15833327 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 418 93.0 1e-117 MLLNALAGLGHRGLKTISTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIII VSGLFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTILFVAVGIWGGALVGVNWKGI DAGFFWSAMQDAIDLRMDLVNCLIKSVVFAVTVTWIALFNGYDAIPTSAGISRATTRTVV HSSLAVLGLDFVLTALMFGN >gi|333596725|gb|GL892087.1| GENE 1727 1904681 - 1905493 254 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 5 218 1 214 223 102 30 6e-20 MSQTMANIVDVRGVSFSRGNRLIFDDISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIPP DSGEILFDGENVPEMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTHLPPEL LHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM GVLVKLISELNSALGVTCVVVSHDVPEVLSIADYAYIVADKKIVAHGSAQALQENGDPRV RQFLDGIADGPVPFRYPAGDYHDDLLGIGS >gi|333596725|gb|GL892087.1| GENE 1728 1905721 - 1906698 752 325 aa, chain + ## HITS:1 COG:STM3314 KEGG:ns NR:ns ## COG: STM3314 COG0530 # Protein_GI_number: 16766609 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Salmonella typhimurium LT2 # 1 325 1 325 325 416 80.0 1e-116 MLLATALLIIGLLLVVYSADRLVFAASILCRLIGMPPIIIGMTVVSVGTSLPEIIVSVSA SLHGQVDLAIGTAIGSNIVNILLILGLAALLHPFRVHSDVLRRELPLMLVVSLLAGYVLY DGVLSVDDGIFLLALAVIWLLYSVKIARLAEKQGNDSLTREHLAELPREGTLPVALLWLG VALIIMPMATQMVVDNATVLANAFAMSELTIGLTVIAIGTSLPELATAIAGARKGEDDIA IGNIIGSNIFNIAIVTGLPALISPGPFNPMVFTRDYGVMLLVSVIFALLCWRRKEQIGKG AGALLTGGFIVWLAMLYWLSPLLSG >gi|333596725|gb|GL892087.1| GENE 1729 1906712 - 1907698 1075 328 aa, chain + ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 1 212 1 212 212 384 89.0 1e-106 MSQIELQPGFDFQKAGKDVLEIEREGLAQLDQYINQDFSLACEKMFYCAGKVVVMGMGKS GHIGRKMAATFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLK RLHVPLICMTSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLE ARGFTPEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMT VICDDLMKIQGIFTDGDLRRVFDMGVDVRTLGIADVMTPGGIRVRPGTLAVDVLNLMQSR HITSVMVADGDQLLGVVHMHDLLRAGVV >gi|333596725|gb|GL892087.1| GENE 1730 1907713 - 1908279 656 188 aa, chain + ## HITS:1 COG:STM3316 KEGG:ns NR:ns ## COG: STM3316 COG1778 # Protein_GI_number: 16766611 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 336 90.0 1e-92 MSNAGASLATCYGPVSAHMMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY GIRCALTSGIEVAIITGRKAKLVEDRCETLGITHLYQGQSDKMVAFRDLLGKLGIAPENV AYVGDDLIDWPVMAEVGLSIAVADAHPLLIPRADYVTHIHGGRGAVREVCDLLLLAQGKL DEAKGQSI >gi|333596725|gb|GL892087.1| GENE 1731 1908276 - 1908851 551 191 aa, chain + ## HITS:1 COG:STM3317 KEGG:ns NR:ns ## COG: STM3317 COG3117 # Protein_GI_number: 16766612 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 315 85.0 4e-86 MSKTRRWVIILLALVALVLIGVNLADRDDSQAEVVNTSDPTYKSDHSDTVVYSPEGALNY RLVAQHVEYFSDDGTSWFTQPVMTTFDTDKVPTWSIKSDRAKLTNDRMLYLYGHVEVNAL TADAQLRKITTDNAQINLVTQDVTSQDLVTLYGTTFNSSGLRMRGNLRSKNAELIEKVRT SYEIQNKQTQP >gi|333596725|gb|GL892087.1| GENE 1732 1908820 - 1909374 831 184 aa, chain + ## HITS:1 COG:STM3318 KEGG:ns NR:ns ## COG: STM3318 COG1934 # Protein_GI_number: 16766613 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 184 1 184 184 308 90.0 3e-84 MKFKTNKLSLKVVIASALLAASLPALAVTGDTEQPIHIESDTQSLDMQGNVVTFTGNVVM TQGTIKINADKVVVTRPGGEQGKEIIDGYGNPATFYQMQDNGKPVKGHASHMHYELAKDL VILTGNAYLEQLDSNIKGDKITYLVKEQKMQASSEKGKRVTTVLVPSQLQDKNNGQAPAQ KKSN >gi|333596725|gb|GL892087.1| GENE 1733 1909381 - 1910106 293 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 225 12 231 312 117 33 2e-24 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI IIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVFDNLMAVLQIRDDLTSEQRTDRANE LMEEFHIEHLRDSLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPQQILEDEHVKRVYLGEDFR L >gi|333596725|gb|GL892087.1| GENE 1734 1910154 - 1911587 1523 477 aa, chain + ## HITS:1 COG:STM3320 KEGG:ns NR:ns ## COG: STM3320 COG1508 # Protein_GI_number: 16766615 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Salmonella typhimurium LT2 # 1 477 1 477 477 795 90.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVDTQQ TQDTETLDSVDALEQKDMPDELPLDASWDEIYTAGTPSGTRADYQDDELPVYQGETTQSL QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVTLDEILESIGDDDIEMEEIEAVLK RVQRFDPIGVAAKDLRDCLLIQLSQFAKETPWIDEARLIISDHLDLLANHDFRTLMRVTR LKEEVLKEAVNLIQSLDPRPGQSIQTSEPEYVIPDVLVRKHNDRWVVELNSDSIPRLQIN QQYAAMCTSARNDADNQYIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTTMLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|333596725|gb|GL892087.1| GENE 1735 1911610 - 1911897 478 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146313273|ref|YP_001178347.1| putative sigma(54) modulation protein [Enterobacter sp. 638] # 1 95 1 95 95 188 95 7e-46 MQLNITGHNVEITEALRDFVNTKFAKLEQYFERINQVYVVLKVEKVTHISDATLHVNGGE LHASAEGQDMYAAIDGLIDKLARQLNKHKDKLKQH >gi|333596725|gb|GL892087.1| GENE 1736 1911980 - 1912471 467 163 aa, chain + ## HITS:1 COG:STM3322 KEGG:ns NR:ns ## COG: STM3322 COG1762 # Protein_GI_number: 16766617 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 163 1 163 163 288 92.0 4e-78 MINNDSALQLSNVLNQDCTRSGVHCQSKKRALEIISELAAKQLGLPPQIVFEAILTREKM GSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTH LHTLSLVAKRLADKTICRRLRSAQSDEELYQIITEAEGHQDEA >gi|333596725|gb|GL892087.1| GENE 1737 1912517 - 1913371 933 284 aa, chain + ## HITS:1 COG:STM3323 KEGG:ns NR:ns ## COG: STM3323 COG1660 # Protein_GI_number: 16766618 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 555 98.0 1e-158 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADRQISAAVSIDVRNM PESPEIFEQAMNSLPECFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKES DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKT >gi|333596725|gb|GL892087.1| GENE 1738 1913368 - 1913640 411 90 aa, chain + ## HITS:1 COG:ECs4085 KEGG:ns NR:ns ## COG: ECs4085 COG1925 # Protein_GI_number: 15833339 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 147 98.0 4e-36 MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKG RQIEVEATGPQEEEALAAVIALFNAGFDED >gi|333596725|gb|GL892087.1| GENE 1739 1913680 - 1914405 678 241 aa, chain - ## HITS:1 COG:mtgA KEGG:ns NR:ns ## COG: mtgA COG0744 # Protein_GI_number: 16131098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 4 240 5 241 242 392 83.0 1e-109 MSRKLSPGGWVKRILLRFVLVLAVFWGGGIALFSILPVPFSAVMAERQISAWLSGDFGYV AHSDWVSMDAISPWMGLAVIAAEDQKFPEHWGFDVAAIEKALDHNERHENRVRGASTLSQ QTVKNLFLWDGRSWVRKGLEAGLTLGVETVWSKKRILTVYLNIAEFGDGVFGVEAASQRY FGKPASRLTMSEAALLAAVLPNPLRFKASAPSGYVRSRQAWIMRQMRQLGGEGFMERNHL M >gi|333596725|gb|GL892087.1| GENE 1740 1914402 - 1915055 755 217 aa, chain - ## HITS:1 COG:yhbL KEGG:ns NR:ns ## COG: yhbL COG3155 # Protein_GI_number: 16131099 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Escherichia coli K12 # 1 217 4 220 220 347 82.0 8e-96 MKKIGVVLSGCGVFDGSEIHEAVLTLLALSRQGAEVICFAPDKTQADVINHLTGEPMAES RNVLIEAARIVRGDIHPLAQADAAELDALIVPGGFGAAKNLSTFATEGAACHVDPDLKAL SLAMHAAGKPQGFICIAPAMLPKIFDFPLRLTIGTDIDTAEMVEDMGGEHVPCPVDDIVV DEDNKIITTPAYMLAQNIAEAAAGIEKLVDRVLVLTE >gi|333596725|gb|GL892087.1| GENE 1741 1915288 - 1917621 3037 777 aa, chain - ## HITS:1 COG:ZarcB_1 KEGG:ns NR:ns ## COG: ZarcB_1 COG0642 # Protein_GI_number: 15803750 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 562 1 562 562 987 92.0 0 MKQIRMLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF FGLLITPWAVYFLSVVVEQLEESRQRLSKLVDKLEEMRERDLKLNVQLKDNIAQLNQEIS DREKAEAERQTTLEQLKIEMKEREVTQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC NRAMELLTGKSEKQLIHLKPQDVYSEEAAAKVMETDEKVFRHNVSLTYEQWLDYPDGRKA CFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG IVGLSRILLDTELTSEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTG FLADLENLSGLQAQQKGLSFVMEPTLPLPHKVVTDGTRLRQILWNLISNAVKFTQKGQVA VRIRYDEGDMLHFEVEDSGIGIPQEEQDKIFAMYYQVKDSHGGKPATGTGIGLAVSKRLA KSMGGDITVASQPGKGSTFTLTVHAPAVAEEVEDTFENDDMPLPALHVLLVEDIELNVIV ARSVLEKLGNSVDVAMTGKAALEMFTPGEYDLVLLDIQLPDMTGLDISRELTRKYAPDEL PPLVALTANVLKDKKEYLEAGMDDVLSKPLAVPALTAMIKKFWDTCDEEESTMTSVDSAK AQTILDTAMLEQYIDLVGPKLITDGLAVFEKMMPGYLNVLESNLTARDQKGIVEEGHKIK GAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGDWVEEMKQEWQNDVAVLKAWVDARKK >gi|333596725|gb|GL892087.1| GENE 1742 1917759 - 1918841 1573 360 aa, chain - ## HITS:1 COG:ECs5239 KEGG:ns NR:ns ## COG: ECs5239 COG0795 # Protein_GI_number: 15834493 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 360 2 361 361 633 95.0 0 MQAFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSV PKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAI GEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGQNFVYIERVKGDDELGGVSIYAF NNDRRLQSVRYAASAKFDANNKLWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG VVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL RSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWMLLKRS >gi|333596725|gb|GL892087.1| GENE 1743 1918841 - 1919941 1216 366 aa, chain - ## HITS:1 COG:STM4479 KEGG:ns NR:ns ## COG: STM4479 COG0795 # Protein_GI_number: 16767724 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 587 91.0 1e-167 MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGEIPTNLVLSLLGLGVPEMA QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMVLALFTGIVAAVNVMWA GPTSSRHQDEVLAEAKANPGLAALAQGQFQQATDGNSVLFIESVDGNRFNDVFLAQLRPK GNARPSVVVADSGQLAQRKDGSQVVTLNKGTRFEGTAMLRDFRITDFQNYQAIIGHQAVA LDPTDTEQMDMRTLMNTDTDRARAELHWRITLVFTVFMMALMVVPLSVVNPRQGRVLSML PAMLLYLVFFLLQTSIKSNGGKGKIDPMIWTWVVNGLYLLLAVGLNLWDTVPVRRLRARF TRKGAI >gi|333596725|gb|GL892087.1| GENE 1744 1920207 - 1921718 1704 503 aa, chain + ## HITS:1 COG:STM4477 KEGG:ns NR:ns ## COG: STM4477 COG0260 # Protein_GI_number: 16767722 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Salmonella typhimurium LT2 # 1 503 1 503 503 989 98.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NTYWKVRQAVETAKESLYSFDQLKTTKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAAYLASQARQLADAYSKNVITRVIGEQQMKELGMHSYLAVG NGSQNESLMSVIEYKGNPSEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAV YGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC DVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMSNHNPLAHELIGASEQAGDRAWRL PLGDEFQEQLESNFADMANIGGRPGGAITAGCFLARFTRKYNWAHLDIAGTAWRSGKAKG ATGRPVALLSQFLLNRAGFNGDE >gi|333596725|gb|GL892087.1| GENE 1745 1921836 - 1922279 449 147 aa, chain + ## HITS:1 COG:STM4476 KEGG:ns NR:ns ## COG: STM4476 COG2927 # Protein_GI_number: 16767721 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Salmonella typhimurium LT2 # 1 147 14 160 160 275 93.0 3e-74 MKNATFYLLDNDTHQDGLSAVEQLVCEIAAERWRAGKRVLIACEDEQQAIRLDEALWARP PESFVPHNLSGEGPRGGAPVEIAWPQKRNSSARDILISLRTDFADFATAFTEVVDFVPYE ESLKQLARERYKAYRLAGFNLNTATWK >gi|333596725|gb|GL892087.1| GENE 1746 1922279 - 1925134 3740 951 aa, chain + ## HITS:1 COG:STM4475 KEGG:ns NR:ns ## COG: STM4475 COG0525 # Protein_GI_number: 16767720 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 951 1 951 951 1834 93.0 0 MEKTYNPRDIEQPLYEHWEQQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKAE SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKFVVLPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGRRHQLPMINI LTFDGDIRESAEVYDTKGNESDVYSSDIPAEFQKLERFAARKAIVAAVDALGLLEEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGSIQFVPKQYENMYFSWMRDI QDWCISRQLWWGHRIPAWYDNEGNVYVGRTEEEVRQENNLGADVALRQDEDVLDTWFSSA LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDEDGKPQVPFHT VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEK QFPNGIESHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQD CGFNGGEMTLSLADRWILAEFNQTVKAFRDALDSYRFDIAAGILYEFTWNQFCDWYLELA KPVMNGGTEAELRGTRNTLITVLEGLLRLAHPIIPFITETIWQRVKVIAGINADTIMLQP FPAFDAAKVDDAASADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSEAAVRRVTEN NTFLKTMARLESITVLPTDDKGPVSVTKIIDGAELLIPMAGLIDKDAELARLAKEVAKVD VEIGKIESKLANEGFVARAPEAVIAKERERLVAFADAKTKLIEQQAVIAAL >gi|333596725|gb|GL892087.1| GENE 1747 1925258 - 1925761 607 167 aa, chain + ## HITS:1 COG:STM4473 KEGG:ns NR:ns ## COG: STM4473 COG0454 # Protein_GI_number: 16767718 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 265 80.0 4e-71 MSVITPVATTMRRITEQDNPAIAAVIRTVSAEYGLTADKGYTVADPNLDELFQLYSQPGH AYWVIEQDGQVVGGGGIAPLLCSEPDICELQKMYFLPTIRGQGLAKKLALVALEYARSQG FKRCYLETTAFLKEAIGLYEHLGFEHIDAPLGCTGHVDCEVRMLKSL >gi|333596725|gb|GL892087.1| GENE 1748 1925845 - 1926864 1304 339 aa, chain + ## HITS:1 COG:ECs5241 KEGG:ns NR:ns ## COG: ECs5241 COG1064 # Protein_GI_number: 15834495 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 # 1 339 15 353 353 625 90.0 1e-179 MSKIKSYAAPQAGAELELYEYDAGELKAEDVEVQVDYCGICHSDLSMIDNEWGFSSYPLV AGHEVIGRVVALGSAAQDKGLKVGQRVGIGWTARSCGHCDACISGNQINCLEGAVPTILN KGGFADKLRADWQWVIPLPDSIDIESAGPLLCGGITVFKPLLMHHVTATSRVGVIGIGGL GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALTALAGQFDLIINTVN VDLDWQPYFEALAYGGNFHTVGAVMKPLPVPAFTLIGGDRSVSGSATGTPYELRKLMKFA GRTKVAPTTELYPMSKINEAIQHVRDGKARYRVVLKADF >gi|333596725|gb|GL892087.1| GENE 1749 1926957 - 1928603 1831 548 aa, chain - ## HITS:1 COG:mll5296 KEGG:ns NR:ns ## COG: mll5296 COG2376 # Protein_GI_number: 13474417 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Mesorhizobium loti # 3 540 2 537 547 441 53.0 1e-123 MSRFFFNDRKQLVNDAIEGILLSAPHGNLVKLDIDPAIRVVARGDWDKSRVAVISGGGSG HEPAHAGFVGKGMLTAAVCGDLFASPSVDAVLNAIVAVTGDRGCLLIVKNYTGDRLNFGL AAEKAKRYGLKVEMVIVADDIALPDNKQPRGIAGTALVHKIAGYAAEQGKSLTDVRDIAQ QACDNLWSLGVAMQTCNLPGSDDEEGRIKQGHVELGLGIHGEPGASVVDTQNSRAIIDTL VTPLKAQAGDGRFAVLINNLGGVSALEMALLTKELAHSALKTEIAYLIGPAPLVSALDMK GFSLTLLKLNDFFEKAIHAEVETLGWQKPVAFAPLRTVPHSALYDRVEYTPSDNPQVGAL VSSVTKSLIQLENRLNALDAKVGDGDTGSTFAQGARDIAQRLEENNLPLNDVPTLLVLVG ERLATVMGGSSGVLMSIFFTAAGQKLHDGHSLPDALLSGLAQMKQYGGADLGDRTLIDAL QPALEALQKGNIQAAAQAAQQGAEATAKMAKAGAGRSSYVNKENLDGVMDPGAVAVAEVF KTMVDAKR >gi|333596725|gb|GL892087.1| GENE 1750 1928741 - 1930243 1894 500 aa, chain + ## HITS:1 COG:yjgR KEGG:ns NR:ns ## COG: yjgR COG0433 # Protein_GI_number: 16132085 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 500 1 500 500 894 92.0 0 MSTPLLIARTLEKELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK GDLTGVAQEGAASEKLLERLKNIGITDWTPHGNPVVVWDIFGEKGHPVRATVSDLGPLLL ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV GAIQRGLLTLEQQGAENFFGEPMLDIKDWMRTDSSGKGIINILSAEKLYQMPKLYAASLL WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTETAIQALGTGE ALISFLDAKGSPTVVERAMVIAPCSRMGPVTDDERNGLINHSPVYGKYEDEVDRESAFEM LQKGVQATAESQDAPAAKGQTVAVDDGILGGLKDILFGSTGPRGGKRDGVVQTMAKSATR QITNQIVRGMLGSLLGGRRR >gi|333596725|gb|GL892087.1| GENE 1751 1930223 - 1931206 876 327 aa, chain - ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 15 321 1 307 309 593 90.0 1e-169 MAGLSPFFGTVYQIMQLQKLVNMFGGDLLQRYGQKVHKLTLHGGFSCPNRDGTIGRGGCT FCNVASFADEAQQHKSIAEQLAHQASLVNRAKQYLAYFQAYTSTWAEVQVLRAMYQQAVA QANIVGLCVGTRPDCVPDAVLDLLSEYKEKGYEIWLELGLQTAHDKTLHRINRGHDFACY QRTTRLARERGLKVCSHLIVGLPGEGRQHGLDTLEKVVETGVDGIKLHPLHIVKGSIMAK AWEAGRLSGIALDDYTVTAGEMIRHTPPEIVYHRISASARRPTLLAPLWCENRWTGMVEI DRYLHEHGVQGSALGRPWVSPLPATAA >gi|333596725|gb|GL892087.1| GENE 1752 1931852 - 1936312 5571 1486 aa, chain + ## HITS:1 COG:ECs4091_2 KEGG:ns NR:ns ## COG: ECs4091_2 COG0069 # Protein_GI_number: 15833345 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Escherichia coli O157:H7 # 379 1194 1 816 816 1565 93.0 0 MLYDKSLEKDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRIVAEERGWRLAKNYAVGMLFLNQDPEKAAASRRIVEEELQRETLSIVGWRDVP TNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLQDDKEFYVCSLS NLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIVRA MRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPAR YVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRGGRILHSAETDNDLKSRH PYKEWMAKNVRRLVPFEDLPDEEVGSREMDDDTLASFQKQFNYSAEELDSVIRVLGENGQ EAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVF CEAEGQAHRLTFKSPILLYSDFKQLTTMTEEHYRADTLDITFDVTETSLEETVNALCDKA EQMVRNGTVLLVLSDRNIAKNRLPVPAPMAVGAIQTRLVDKSLRCDANIIVETASARDPH HFAVLLGFGATAIYPYLAYETLARLVDTRAIDKDYRAVMLNYRNGINKGLYKIMSKMGIS TIASYRCSKLFEAVGLHDEVANLCFQGVVSRIGGAGFADFQQDLVNLSKRAWLARKPLEQ GGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQQYAELVNNRPAATLRDLIALNPGD EAVSIDDVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYG TNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSV PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADL ITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGLDII KAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDEKLRKNHYHGLPFKVTNYF DFIARETRELMAQLGVKRLVDLIGRTDLLKELEGFTAKQQKLELSKLLETAQPHPGKAVY CTENNPPFDNGVLNAQLLQQAKPYVDEKQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQG LASDPITAHFSGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLLAVRPPVGSAFRSH EASIIGNTCLYGATGGRLFAAGRAGERFAVRNSGAITVVEGIGDNGCEYMTGGIVCVLGK TGVNFGAGMTGGFAYILDEDGEFRKRVNPELVEVLDVDSLAIHEEHLRGLITEHVQHTGS SRGEEILANWPAFSAKFALVKPKSSDVKALLGHRSRSAAELRVQAQ >gi|333596725|gb|GL892087.1| GENE 1753 1936322 - 1937740 1932 472 aa, chain + ## HITS:1 COG:STM3331 KEGG:ns NR:ns ## COG: STM3331 COG0493 # Protein_GI_number: 16766626 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 472 1 472 472 944 95.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKAFEMGWRPDMTGVRQTDKRVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLKDYDAVFLGVG TYQSMRGGLENEDAPGVYDALPFLIANTKQLMGYGETADEPFVSMEGKRVVVLGGGDTAM DCVRTSIRQNAAHVICAYRRDEENMPGSKREVKNAREEGVEFQFNIQPLGIEVNANGKVS GVKMARTEMGAPDAKGRRRAEIVAGSEHVIPADAVVMAFGFRPHSMEWLAKHSVELDSQG RVIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAAEGIMNFLEV >gi|333596725|gb|GL892087.1| GENE 1754 1937852 - 1938412 339 186 aa, chain - ## HITS:1 COG:no KEGG:ECL_04604 NR:ns ## KEGG: ECL_04604 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 18 186 15 183 183 238 63.0 7e-62 MRFQRKMTLAGLLAFCLPAMAFAEDCQITLSQSVVDYHQLQRENIVTTQQDWHKMPEREV NVNVYCPEKHQIGVLLQGASGEKGRFLFGEKGGVAIKIDNMIVDGKNYNVGKTGDQVNLT PESDGEQSLYLRNNETVVAVENNQVPIVQQMSFRVTVFPVLRDNAFRNIADVTQLESDLS WKIITK >gi|333596725|gb|GL892087.1| GENE 1755 1938409 - 1940835 1791 808 aa, chain - ## HITS:1 COG:STM4572 KEGG:ns NR:ns ## COG: STM4572 COG3188 # Protein_GI_number: 16767813 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 30 808 24 802 802 814 51.0 0 MTVCKKSRLALCVRAILCGTLPLVLLNSTSLQAREVTFDTGIIKSRGLSMDLNHYFAEAP RFLPGTHSVQIKVNGKDRGTAAVRFNEEGVLCIDNDFLEFAGIMPVPLKASETCHDIRSD YAQAVVNSLPNQEAVELFLPQEAINSLTADVKNFQHGGTAGLLNYSLFSTRNEYGSSESN RYSQASLEAGFNALDWSLRSRYILTDDQGKRNAESIYTYAEHVFVPQRLTMQVGEINASS QVLSGAPILGVQLMPTTGLQKQGSGVSVSGIARTPQARVEIRQSGQVIFSTLVPAGPFKL DDVPMVRSNVDLDVTVVETDGSSSHFIVPAASVRSQQLSRPQGLTISAGQVRDIESDYDD PMVVNVSDGWRILPWMNFMASGAAAEDYQAVGGRTEFRLTDRWGISTSAAASKSKFGDSN SGLKTELQSDLALGENFGLSASATHYSGGYRELTEAMDDDFEASDNVYSGNISFSTEMAG AFSAGFNYNQSAGDEPDSRYLLLTWGKTFKYASVNVNWQTSVGNNDSDDEQDDDLLYINV SIPLGGSQSLSTYMRKQGDSTSYGVANSGGIGDNTNYYISADRDDESHENSFNGNITTNL HYTQLGLGGGTSGNNNRNYNASLSGGIAMHKDGVTFSPYTIKDTFAIAKVSEPKSGIEIS TPQGTVWTDRWGQAVVPGLTEWRNSRLEVDANKLPQSMTLANGTKYVAAGHASVSEVTFK VLNSRRVMLRVKRTDGTPLAKGISIVDGKGHYIVTTVDDGHVFLNDADQLDALYAMDDNN KQLCQIDFTLSDKRDEDAFYEEVNGVCR >gi|333596725|gb|GL892087.1| GENE 1756 1940845 - 1941549 459 234 aa, chain - ## HITS:1 COG:STM4573 KEGG:ns NR:ns ## COG: STM4573 COG3121 # Protein_GI_number: 16767814 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 17 232 17 233 235 285 67.0 7e-77 MSCFKSVLLNTLITAALFSVQFSGHAAGMVPETSLLVIDEATHSGIINVKNTDSFPSLLY TNVVDLPDDKGLKLIATQPVVRLEPGQTQQLRFILQTKEPLSVEHYKRVTFEGIPPKSDD KKIKIGINIRQDIPVLIRPKSLAVVTDAWKELKWSANGKSLKVNNPSKYVVRLAQKVVTQ PSGAAGSLSKTYILPGETLTTTLDKTPVSDNKVKFFPASRYGVEVPSFISDLNK >gi|333596725|gb|GL892087.1| GENE 1757 1942132 - 1942623 442 163 aa, chain - ## HITS:1 COG:STM3341 KEGG:ns NR:ns ## COG: STM3341 COG2969 # Protein_GI_number: 16766636 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Salmonella typhimurium LT2 # 1 133 3 135 166 230 90.0 9e-61 MSQLSPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVLVPMEYARDGQIVLNIAPRAVGN LELANDEVRFNARFGGVPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDVASLNDDES APDSESETVMSIIDGDKPDHADDNDPDDDPPPRGGRPALRVVK >gi|333596725|gb|GL892087.1| GENE 1758 1942635 - 1943273 650 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 202 1 202 212 254 61 8e-66 MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPSQSVP TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMQRIEKDWYSLMNVIVTG SSSEADAARKQLREELLAIAPVFGQKPFFLSDEFSLVDCYLAPLLWRLPTLGVEFSGPGA KELKGYMTRVFERDSFLASLTEPEREMRLGRG >gi|333596725|gb|GL892087.1| GENE 1759 1943581 - 1943973 648 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313299|ref|YP_001178373.1| 30S ribosomal protein S9 [Enterobacter sp. 638] # 1 130 1 130 130 254 100 1e-65 MAENQYYGTGRRKSSAARVFIKPGSGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|333596725|gb|GL892087.1| GENE 1760 1943989 - 1944492 857 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238896727|ref|YP_002921472.1| ribosomal protein L13 [Klebsiella pneumoniae NTUH-K2044] # 1 167 1 167 167 334 97 7e-90 MSCEPQLTKRLGVHQRVTYYLGKLLMKTFTAKPETVQRDWYVVDATGKTLGRLATELARR LRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKMYYHHTGHIGGIKEATFEEMIAR RPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI >gi|333596725|gb|GL892087.1| GENE 1761 1944717 - 1945841 1128 374 aa, chain - ## HITS:1 COG:ECs4105 KEGG:ns NR:ns ## COG: ECs4105 COG1485 # Protein_GI_number: 15833359 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 373 1 373 375 654 85.0 0 MQNLSPSSRYQLALSEGTHQPDDVQREAVNRLDTIYQELLAKPADAVQSSGLKAAFGRLL GKKEPTINAPVRGLYMWGGVGRGKTWLMDMFYQSLPGTRKQRLHFHRFMLRVHEELTALQ GKTDPLEIVADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDE LYRNGLQRARFLPAIDAIKQHCDIMNVDAGVDYRLRTLTQAHLWLSPLNADTAREMDKLW LALAGAPRGNAPALEINHRPLPTLGVENQTLAVSFATLCVDARSQHDYIALSRLFHTVML WDVPVMTPLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGERLKFEFQRCLSRLQ EMQSEEYLKREHMP >gi|333596725|gb|GL892087.1| GENE 1762 1946031 - 1946429 463 132 aa, chain + ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 132 3 134 134 225 92.0 2e-59 MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQSLQYELEKNKAELEEYREELVSHFARSA ELLDNMATDYRQLYQHMAKSSSSLLPEMTAETNPFRNRLADSEAGNDQAPVQMPRDYSDG ASGLLRGGVKRD >gi|333596725|gb|GL892087.1| GENE 1763 1946600 - 1947967 1627 455 aa, chain + ## HITS:1 COG:STM3348 KEGG:ns NR:ns ## COG: STM3348 COG0265 # Protein_GI_number: 16766643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Salmonella typhimurium LT2 # 1 455 1 455 455 694 85.0 0 MKKKNQLLSALALSVGLSLSASFPASAALPSQVPGQEAIPSLAPMLEKVLPAVVSVQVEG TARQSQRIPEELKKYFGEDAPDQQAQPFEGLGSGVIIDAAKGYILTNNHVISQADKISVQ LNDGREFDAKLIGGDDQSDIALLQVQNPSNLTQIAIADSDKLRVGDFAVAVGNPFGLGQT ATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSI GIGFAIPSNMAKTLSQQLIQFGEVKRGLLGIKGMEMSADIAKAFKLNVQRGAFVSEVLPN SGSAKAGVKSGDVIVSLNDKPLSSFAELRSRIATTEPGAKVKLGLIREGKPLTVEVTLDK STSSSASAEQISPALQGATLSDGQLKNGTKGISVTTVEKSSPAAQAGLHQDDVIVGVNRT RVQSIAEMRKVLESKPAVIALQIIRGNDTLYILLR >gi|333596725|gb|GL892087.1| GENE 1764 1948060 - 1949127 1365 355 aa, chain + ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 355 1 355 355 592 89.0 1e-169 MLLKLFRSIVIGLIVAGLLLVAMPSLRQFNKLSAPQFDSTDETPATYNQAVRRAAPAVVN VYNRGLNSSAHNQLEIRTLGSGVIMDDRGYIITNKHVINDADQIIVALQDGRVFEALLVG SDSLTDLAVLKINATGGLPTIPINRKRTPHIGDVVLAIGNPYNLGQTITQGIISATGRIG LNPSGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL ATKIMDKLIRDGRVIRGYIGIGGREIAPMHTQGGGIDQIQGIVVNEVAPGGPAANAGIQV NDVILSVNGTPAVSALETMDQVAEIRPGSIIPVEVMRNDKKLTIQVTIQEYPATN >gi|333596725|gb|GL892087.1| GENE 1765 1949179 - 1950117 1284 312 aa, chain - ## HITS:1 COG:ECs4109 KEGG:ns NR:ns ## COG: ECs4109 COG0039 # Protein_GI_number: 15833363 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 545 96.0 1e-155 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG EDARPALQGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAETCPKACIGIITNP VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPTEVEVPVIGGHSGV TILPLLSQIPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR ALQGEKDVVECAYVEGDGEHARFFSQPLLLGKNGVEERKSIGTLSAFEQNAMEGMLDTLK KDITLGEEFVNK >gi|333596725|gb|GL892087.1| GENE 1766 1950516 - 1950986 552 156 aa, chain + ## HITS:1 COG:ECs4110 KEGG:ns NR:ns ## COG: ECs4110 COG1438 # Protein_GI_number: 15833364 # Func_class: K Transcription # Function: Arginine repressor # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 285 96.0 2e-77 MRSSSKQEELVKAFKALLKEEKFSSQGEIVQALQEQGFDNINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG ILGTIAGDDTIFTTPANGFSVKDLYEAILVLFEQEL >gi|333596725|gb|GL892087.1| GENE 1767 1951365 - 1951628 354 87 aa, chain + ## HITS:1 COG:no KEGG:ECL_04619 NR:ns ## KEGG: ECL_04619 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 87 1 87 87 140 96.0 1e-32 MKIKTTVAALSVLSVLSFGAFAADTINAEQAQSRQAIGTVSVGAIGTSPMDMHEMLNKKA EEQGASSYRIIEARSGDHWHATAELYK >gi|333596725|gb|GL892087.1| GENE 1768 1951685 - 1951960 312 91 aa, chain - ## HITS:1 COG:STM3363 KEGG:ns NR:ns ## COG: STM3363 COG2732 # Protein_GI_number: 16766658 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 126 74.0 8e-30 MKIYTFDFDEIESQEDFYREFTRAFDLERGSVSDLDMLWDVVTGDRLPLPLEIEFIHLPE KLRRRFGALILLFDEAEEELEGQLRFNVRHS >gi|333596725|gb|GL892087.1| GENE 1769 1952006 - 1953460 1756 484 aa, chain - ## HITS:1 COG:PA0265 KEGG:ns NR:ns ## COG: PA0265 COG1012 # Protein_GI_number: 15595462 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 6 484 3 483 483 541 55.0 1e-153 MTTQALQDSILFQTGYLVNGIWKTLDTTFDVLNPATGEVVAKVAKAGKAETEEAIAAATK AFPAWRAKTAKERSAILYRWYELIIENKSWLGRLMTTEQGKPLKEAEGEVDYAASFIQWF AEQAKRANGEIIPPVKPGSRILATREPVGVVAAITPWNFPMAMLTRKLGPALAAGCTGVI KPANNTPLSAFALLTLAKQAGVPDGVLNAVAGSTSEISDAIMASHDVRKISFTGSTAVGK TLVRNSAETMKKVSMELGGNAPYIVFEDADIDAAVKGAIANKFRNAGQVCVSVNRFYIQE TVYDKFVNQLADAVKALKVGSGLDEGIVVGPLIEPSAVDKVREHVEDAVAKGATVLAGGK PHELGGNFWMPTVLGDCHEGMKLAEEETFGPVAACFRFTSEDEVVMRANNTPFGLAAYFY TQNLSRVFRVSQAIESGMIGINECAVSTELGPFGGVKESGLGREGSVLGLEEFLEVKTLH IGGL >gi|333596725|gb|GL892087.1| GENE 1770 1953547 - 1955514 1804 655 aa, chain - ## HITS:1 COG:yhcP KEGG:ns NR:ns ## COG: yhcP COG1289 # Protein_GI_number: 16131130 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 655 1 655 655 1134 86.0 0 MGIFSIASQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYS GAIRYRGMLRIIGTFIGCIAALTIIILMIRTPLLMLIVCCIWAGFCTWISSLVKVENSYA WGLAGYTALIIIITIQSEPLLAPQFAVERCSEIVIGIVCAIVADLLFSPRSIKQEVDREL DALIVAQYQLMQLCIKHGDSEEVDKAWSALVRRTQALEGMRSNLNMESSRWERANRRLKA INTVSLTLITQACETYLIQNTRPEVVTDTFRELFDEPVETVQDVHRQLKRMRRVIAWTGE RDTPVTIYTWVGAATRYLLLKRGVISNTKISAAEEEVLQGEVVIKPESAERHHAMVNFWR TTLACILGTLFWLWTGWTSGSGAMVMIAVVTALAMRLPNPRMVAIDFLYGTIAALPIGAL YFLVIIPSTQQSMLLLCISLAVMAFFIGIEVQKRRLGSLGALASTINIIVLDNPMTFHFS QFLDSALGQLVGCFLAMMVILLVRDNSQARTGRVLLNQFVSAAVSSMTTNTARRKENHLP ALYQQLFLLLNKFPGDVARFRLALTMIIAHQRLRNAPVPINDDLSAFHRQLRRTADHVIS ASSDDKRRRYFKQLLEELDIYQEKLRVWEAPPQVTEPVERLVFMLHRYQNALTDS >gi|333596725|gb|GL892087.1| GENE 1771 1955520 - 1956410 1174 296 aa, chain - ## HITS:1 COG:STM3365 KEGG:ns NR:ns ## COG: STM3365 COG1566 # Protein_GI_number: 16766660 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 296 15 310 310 516 91.0 1e-146 MALVILAFIAIFRAWVYYTESPWTRDARFSAEVVAIAPDVAGLITAVNVHDNQLVKKDQV LFTIDQPRYQKALEEAEADVAYYNALASEKRREAGRRNKLGIQAMSREEIDQSNNVLQTV LHQLAKAQATRDLAKLDLERTVIRAPSDGWVTNLNVYAGEFITRGSTAVALVKQNSFYVL AYMEETKLEGVRPGYRAEITPLGSNRVLKGTVDSVAAGVTNSSSTNDSKGMATVDSNLEW VRLAQRVPVRIRLDEQQSNLWPAGTTATVVITGEKDRDASQDSIFRQIAHRLREFG >gi|333596725|gb|GL892087.1| GENE 1772 1956460 - 1956663 191 67 aa, chain - ## HITS:1 COG:no KEGG:ROD_45731 NR:ns ## KEGG: ROD_45731 # Name: aaeX # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 67 13 79 79 92 97.0 4e-18 MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRKVLVPTGIYDFVWHPALFNTALYCCLFY LISRMFV >gi|333596725|gb|GL892087.1| GENE 1773 1956843 - 1957769 915 308 aa, chain + ## HITS:1 COG:ECs4116 KEGG:ns NR:ns ## COG: ECs4116 COG0583 # Protein_GI_number: 15833370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 308 1 308 309 575 91.0 1e-164 MERLKRMSVFAKVVEQGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE AGKIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAAMTAEMLKEYPG LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGSMPMVVCASKSYLAQYGVPEK PADLSNHSWLEYSVRPDNEFELIAPEGLSTKLLPEGRFVTNDPMTISRWLVAGAGIAYVP LMWVINEINSGELEILFPRYQSDPRPVYALYTEKDKLPLKVQVCINYLTDYFVEVAELFQ GMRGRRKE >gi|333596725|gb|GL892087.1| GENE 1774 1957879 - 1959324 1797 481 aa, chain - ## HITS:1 COG:tldD KEGG:ns NR:ns ## COG: tldD COG0312 # Protein_GI_number: 16131134 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli K12 # 1 481 1 481 481 829 91.0 0 MSLNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSY NIDQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQHTALY TSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADVR PLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLSA VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDDG TMLDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPM PRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVTK AVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT A >gi|333596725|gb|GL892087.1| GENE 1775 1959409 - 1963209 3745 1266 aa, chain - ## HITS:1 COG:STM3369 KEGG:ns NR:ns ## COG: STM3369 COG3164 # Protein_GI_number: 16766664 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 1266 1 1266 1266 2034 78.0 0 MRRLPGILLLTGATLVVIVALLVSGLRLVLPHLDSWRPQILAKIESATGLPVDVSHIEAS WQNFGPTLDARDISASLKDGGHLKIKRVTLALDVWQSLLHLRWQFRDLTFWQLQLMTNTP LRSGDSDRGLETNRISDLFLRQFDHFDLRDSEVSFITLSGQRAELAIPQLTWLNGKERHR AEGQVNLSSLNGQHGVMQVRMDLRDDNGLLNNGRVWLQADDVDVKPWLGEWLQQNMQLET ARFSLEGWMTLTNGAFASGDIWLKQGGASWKGERRQHQLSVDNLTAHVTQEKGGWQFAIP DTRISMDNKPWPRGALTLAWMPEQDVGGVNGKRSDELRIRASNLDLTAIEGLRSMAAKLS PDLGEIWLATQPSGQINRLALDIPLQATEKTRFQAAWKNLAWKQWKLLPGAEHFSGKLEG SVENGRLTAEMQDAKMPYETVFRAPLEIEKGNATLNWLKNDKGFQLDGRDIDVKAKAVHA RGNFRYLQPEGDEPWLGILAGISTDDGSQAWRYFPENLMGKALVDYLSGAIQGGQADNAT LVYGGNPHLFPYKHNEGQFQVLVPLRNATYAFQPDWPALKNLDIELNFLNDGLWMKTDSV ALGGVTASNLTANIPDYSKEKLLIDADIKGPGKAVGPYFEDTPLNDSLAATLQQLQLDGD VNARLHLDIPLDGEMTTAKGDVRLNNNSLYIKPLDSTLKNLSGQFSFVNGTLKSEPLKAT WFNQPVNIDFSTTEGDKAYQVAVNMDANWQPSRMDVLPKPIENAVDGAVSWNGKVAIDLP YHAGARYNVDITGDLKNLSSQLPAPLNKKNGEALPVNVKVAGNLNSFELTGNAGGTNHFN SRWLLNRKLTLDRAIWTTDSRTTPPLPEQAGVELNLPPMDGAEWLALFQKGVGQNVDQTA QFPQSITLRTPALTLGGQQWNNLSIVSSPTVNGSKVEAQGREINGSLTMRDNAPWQAAIR YLYYNPTFAASHAQSTSASPLSEATRVDFSGWPDLQLRCAECWLWGQKYGRIDGDFAIQG NTLSLSGGLVDTGFGRLTAKGEWVNKPGEQRTSLKGDIKGNKLDAAANFFGISTPLRGSS FDVNYDLHWRAAPWTPDEASLNGILKTNFGKGEVADVSTGRAGQILRLLSFDALLRKLRF DFSDTFSEGFYYDSIRSTAWIKDGVLHTDDTLVDGLEADIAMKGSVDLVRRELDMEAVVA PEISASVGVAAAFVVNPIVGAAVFAASKVLGPLWSKVSILRYRITGPVDKPQINEVLRQP RKEAQQ >gi|333596725|gb|GL892087.1| GENE 1776 1963252 - 1964721 1643 489 aa, chain - ## HITS:1 COG:STM3370 KEGG:ns NR:ns ## COG: STM3370 COG1530 # Protein_GI_number: 16766665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Salmonella typhimurium LT2 # 1 489 1 489 489 893 96.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGEEQKQFAVRDISELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVSAYCDEQGGFIIRTAAEGISEE DLASDAAYLKRVWTKVMERKKRNQTRYRLYGELALAQRVLRDFADAQLDRIRVDSRLTYE ALLEFTAEYIPEMPGLLEHYTGRQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAM TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKTVETV CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHALAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|333596725|gb|GL892087.1| GENE 1777 1964711 - 1965304 460 197 aa, chain - ## HITS:1 COG:yhdE KEGG:ns NR:ns ## COG: yhdE COG0424 # Protein_GI_number: 16131136 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 197 1 197 197 333 86.0 1e-91 MTSLYLASGSPRRQELLAQLGVSFERIVTGIEEKRAEGESAQQYVSRLAREKAQAGVACV PRDLPVLGADTIVILNGEVLEKPRDADHAARMLRNMSGQTHQVMTAVALADSQYVLDCLV VTEVTFRVLTDEEIAGYIASGEPMDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE LLSNFNSLREGRDNYDG >gi|333596725|gb|GL892087.1| GENE 1778 1965314 - 1965730 305 138 aa, chain - ## HITS:1 COG:STM3372 KEGG:ns NR:ns ## COG: STM3372 COG2891 # Protein_GI_number: 16766667 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Salmonella typhimurium LT2 # 1 138 26 163 163 204 96.0 4e-53 MPWPDDILVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRALSMSII AYLVALKFQLFRNLALWQQALVVMLLSLAADIVVFWAEFLVINVSFRPEVFWSSVVNGVL WPWLFLLMRKIRQQFAVQ >gi|333596725|gb|GL892087.1| GENE 1779 1965802 - 1966818 1170 338 aa, chain - ## HITS:1 COG:STM3373 KEGG:ns NR:ns ## COG: STM3373 COG1792 # Protein_GI_number: 16766668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Salmonella typhimurium LT2 # 1 330 1 330 350 538 96.0 1e-153 MKPIFSRGPSLQFRLILAVLVALGVIIADSRLGTFSQIRTYMDTAVSPFYFISNGPRELL DSVSQTLSSRDQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMV TQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHA LPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEDVHRVANERLMQMMPQV LPAPDAMGPPAPVPAPATGLTQPLPDAPPPPQVSGGGQ >gi|333596725|gb|GL892087.1| GENE 1780 1966881 - 1967924 1121 347 aa, chain - ## HITS:1 COG:ECs4123 KEGG:ns NR:ns ## COG: ECs4123 COG1077 # Protein_GI_number: 15833377 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Escherichia coli O157:H7 # 1 347 21 367 367 649 100.0 0 MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAK QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQ VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRN LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|333596725|gb|GL892087.1| GENE 1781 1968207 - 1970147 1234 646 aa, chain - ## HITS:1 COG:ECs4124_3 KEGG:ns NR:ns ## COG: ECs4124_3 COG2200 # Protein_GI_number: 15833378 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 395 646 1 252 252 450 88.0 1e-126 MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLITTSFPA LSRELDELMVPVDIVQIDIKQGKRTVFSHARQGSYRPAGTVDQYRDVTVHSLKHPGMTIH LMYQDPMSNYLRSLMTTAPLTIAVAFIVLLIFLAVRWQRRQLSGQELLETRSVRILNGER GPQVRGSVYEWPSRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN QLATLLDDPEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQNKMLDRDDMVHMGICAWRGGQST EQVMEHAEAATRNAVLQEANGWAVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV MKSGHVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLIPFLSYWPEENL ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALG ARVAVTQAGLTLVSTSWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV FAAGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV >gi|333596725|gb|GL892087.1| GENE 1782 1970331 - 1971305 1001 324 aa, chain + ## HITS:1 COG:ECs4125 KEGG:ns NR:ns ## COG: ECs4125 COG0604 # Protein_GI_number: 15833379 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 323 1 323 324 555 84.0 1e-158 MQALILEQQDGKTVASVQSIEESRLPEGDVTVDIDWSSLNYKDALAITGKGKIIRNFPMV PGIDFAGRVHTSEDPRFHAGQQVLLTGWGVGENHWGGLAAQARVKGDWLVPMPKGLDGRK AMIIGTAGFTAMLCVMALEEAGIRPDSGEIVVTGASGGVGSTAVTLLHKLGYQVAAVSGR ESTHDYLRQLGANRILSRDEFAETRPLEKQVWAGAVDTVGDKVLAKVLAQMNYGGCVAAC GLAGGFALPTTVMPFILRNVRLQGVDSVMTPAERRTEAWERLARDLPASFYDRSATEIIL SQAPEFANKIMDNQFHGRALVKIA >gi|333596725|gb|GL892087.1| GENE 1783 1971383 - 1972384 1108 333 aa, chain + ## HITS:1 COG:ECs2709 KEGG:ns NR:ns ## COG: ECs2709 COG2041 # Protein_GI_number: 15831963 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Escherichia coli O157:H7 # 2 333 3 334 334 590 85.0 1e-168 MKTRKLTEADVTSESVFMLQRRQILKMLGISATALTLTPAAHADLLDWFKGNDRPKAPSG APLTFTKPARWQNKLTLTPEDKVTGYNNFYEFGLDKADPAANAGSMKTDPWTLKIDGEVA KPLTLDHHDLTTRFPLEERIYRMRCVEAWSMVVPWVGFPLHKLLALVEPTSNAKYVSFQT RYAPDEMPGQKDRFIGGGLEYPYVEGLRLDEAMHPLTLLTVGVYGKALPPQNGAPIRLTV PWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFFANVNPHVDHPRWSQATERFIGSG GALDVKRQPTLLFNGYADEVASLYRGLNLRENF >gi|333596725|gb|GL892087.1| GENE 1784 1972532 - 1972984 450 150 aa, chain + ## HITS:1 COG:STM3378 KEGG:ns NR:ns ## COG: STM3378 COG2717 # Protein_GI_number: 16766673 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 2 150 51 199 199 206 91.0 2e-53 MALKFLLATLLVSPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGINNLALLG SELVTRPYLTLGIVSWLVLLALTLTSTQYAQRKLGRRWQLLHNFVYLVAILAPIHYLWSV KILSPQPVIYAVLALALLAWRYKKFRQWWR >gi|333596725|gb|GL892087.1| GENE 1785 1973219 - 1973671 337 150 aa, chain + ## HITS:1 COG:YPO3660 KEGG:ns NR:ns ## COG: YPO3660 COG0757 # Protein_GI_number: 16123803 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Yersinia pestis # 1 150 1 150 150 199 75.0 2e-51 MADKFQILVLNGPNLNMLGTREPEKYGTLTLNEIVNRLGTEAASLNVDLDHFQSNAEYAI IDRIHQAKDTVDYILINPAAFTHTSVAIRDALLAVSIPFIEIHLSNVHAREPFRHHSYLS DIAAGVICGLGADGYSYALQTAVKRLSQSH >gi|333596725|gb|GL892087.1| GENE 1786 1973693 - 1974157 442 154 aa, chain + ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 154 1 156 156 213 91.0 9e-56 MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPVQQPALSAA VAPAAAEAAPAAATEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMK MMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE >gi|333596725|gb|GL892087.1| GENE 1787 1974168 - 1975517 1594 449 aa, chain + ## HITS:1 COG:STM3380 KEGG:ns NR:ns ## COG: STM3380 COG0439 # Protein_GI_number: 16766675 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Salmonella typhimurium LT2 # 1 449 1 449 449 867 97.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKADTIRLMGDKVSAI TAMKKAGVPTVPGSDGPLTDDMDANRAHAKRIGYPVIIKASGGGGGRGMRVVRSDAELAQ SISMTKAEAKAAFSNDMVYMEKYLENPRHIEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQEEVVVKGHAVECRINAEDPNTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDL QMRIMSDEHFQNGGTNIHYLEKKLGLNEK >gi|333596725|gb|GL892087.1| GENE 1788 1975626 - 1975868 308 80 aa, chain + ## HITS:1 COG:STM3381 KEGG:ns NR:ns ## COG: STM3381 COG3924 # Protein_GI_number: 16766676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 80 1 80 80 125 87.0 2e-29 MDKRFVQAHKEARWALWLTLLYLVAWLVTAYLPDSAIGITGLPHWFEMACLLLPLVFIVL CWAMVKFIYRDISLEDDDAA >gi|333596725|gb|GL892087.1| GENE 1789 1975858 - 1977309 1871 483 aa, chain + ## HITS:1 COG:ECs4130 KEGG:ns NR:ns ## COG: ECs4130 COG4145 # Protein_GI_number: 15833384 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Escherichia coli O157:H7 # 1 483 3 485 485 760 91.0 0 MQLEVILPLIAYLFLVFGLSIYAMRKRSTGTFLNEYFLGSRSMGGVVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQLPAIWLSLGILGKKFAILARRYNAVTLNDMLFARYQS RLLVWLASLSLLVAFIGAMTVQFIGGARLLETAAGIPYETGLIIFGVSIALYTAFGGFRA SVLNDTLQGMVMLIGTIVLLVGIVHAAGGLSHAVETLEAIDPKLVSPQGADDILSPTFMT SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPD LTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNVRPEQV ENERRLKRMSAVITLVLGALLLLAAWRPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAEGALSGMIVGGVLYTVLATFKIQYLGFHPIVPSLLLSLLAFVVGNRFGHPTPQAALIS TDK >gi|333596725|gb|GL892087.1| GENE 1790 1977321 - 1978202 1476 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228579759|ref|YP_002848103.1| ribosomal protein L11 methyltransferase [Citrobacter sp. 30_2] # 1 293 1 293 293 573 94 1e-161 MPWIQLKLNTTGANAEELSDALMEAGSVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF DAETDMKEVVAILENHPLLGTGFAHKIEQLEDKDWEREWMDNFHPMQFGQRLWICPSWRE VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLEGKTVIDFGCGSGILAIAALKLG AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPDAQPEAMKADVVVANILAGPLRELA PLISVLPVEGGLLGLSGILASQADSVCEAYADLFALDPVVEKEEWCRITGLKK >gi|333596725|gb|GL892087.1| GENE 1791 1978340 - 1979080 736 246 aa, chain + ## HITS:1 COG:PM1905 KEGG:ns NR:ns ## COG: PM1905 COG3338 # Protein_GI_number: 15603770 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Pasteurella multocida # 23 246 30 252 252 201 41.0 9e-52 MKHISGKAALLALSIISASAYASHWSYQGEGAPEHWGELDEAYKTCKSGMYQSPINIDNT VKAHISPLETHYIDGPVILTNNGHTIQASENADTRDSITLDKQRWTLQQFHFHAPSENTV HGKKYAMEMHLVHKNADGELTVVAVMFDQGAANTELDKLWGLMPGQVDQNVTIKPTLDMN KLLPADKTYWRFSGSLTTPPCSEGVTWLVLKHPLTVSAEQLQKFTHTMHHENSRPVQPLH GRLVVE >gi|333596725|gb|GL892087.1| GENE 1792 1979410 - 1980375 1082 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 317 28 344 353 421 64 1e-116 MRIGHHQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH VDEPGIRTVQIAGSVPEEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDQ VKSILTAVVSAVDVPVTLKIRTGWSPEHRNCVEIAQLAEDCGIQALTIHGRTRACLFNGE AEYDSIRAVKQKVSIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGELLAPLPLAEVKRLLCSHVRELHDHYGQAKGYRIARKHVSWYLQEHAPNDQFRRTF NAIEDASEQLEALEAYFENLA >gi|333596725|gb|GL892087.1| GENE 1793 1980399 - 1980695 383 98 aa, chain + ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 100.0 1e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|333596725|gb|GL892087.1| GENE 1794 1980867 - 1981037 112 56 aa, chain + ## HITS:1 COG:no KEGG:ECL_04647 NR:ns ## KEGG: ECL_04647 # Name: not_defined # Def: putative periplasmic protein # Organism: E.cloacae # Pathway: not_defined # 3 56 1 54 54 90 96.0 1e-17 MDMIRKYWWLVVFAVSVFIFDALLMQWIELMSTETDKCRNMNSVNPLKLVNCSELD >gi|333596725|gb|GL892087.1| GENE 1795 1981179 - 1983263 1749 694 aa, chain + ## HITS:1 COG:STM3388_3 KEGG:ns NR:ns ## COG: STM3388_3 COG2200 # Protein_GI_number: 16766683 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 428 678 2 252 273 389 75.0 1e-107 MLVSQYNQILVVISFVVAILAAYTALNMAARVAGSQGVAARVWLAGGGVSMGIGVWAMHF IGMLAMDLSMGMSYNAALTVLSMVIAISSSMFALWLVSGEQLRLRRLLPGAVVMGTGIVA MHYTGMAALEVTPGIVWDKTWVVISVVIALAASLAALWLTFRLRQEAAQMALMRLGAAIT MGIAIAGMHYAGMEAAQFPVSTMVHHHGINGSWLAILVSVVALAILGITLLVSMFDARLQ ARTSLLASSLAEANRELAQLALHDTLTRLPNRILLEDRLDQAISKADREGSPFALMFMDP DGFKTVNDAYGHDVGDKLLVAVTQRLLLQLKGQYTLARIGGDEFVLLAETDTPDDAASLA NSLVRVIDSPFHLDPYELMVTLSIGIALYPHDGKTDRELMFNADAAMYHTKHMGRNGYHF FQPSMNTLAQTHLQLMNDLWQAIDRNELRLLYQPKFHAPAGPVLGFEALLRWQHPKQGLL PPDLFLPLAEKTGLIIPIGNWVIDEACRQLREWHLQGHTDWSMAVNLSTLQFEQPSLVKT VLDCLTRHSVPPGMLILEVTETTAMSNPDESVRVLTALTDAGVKASIDDFGTGYSSLLYL KRLPACELKIDRAFVKELSGESEDATIVSAIVALAKTLNLKVVAEGVETAAQQAFLTELG CNTLQGYLLGKPITAQAIKEQCQHGEISPPRTQS >gi|333596725|gb|GL892087.1| GENE 1796 1983258 - 1983905 317 215 aa, chain - ## HITS:1 COG:STM3389 KEGG:ns NR:ns ## COG: STM3389 COG1309 # Protein_GI_number: 16766684 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 201 1 201 220 248 58.0 8e-66 MARKKKEEALKTRQQLIEAAIGLFATRGVANTTLTDIADAAQLTRGAVYWHFSSKSEIFN AIWEQQLPLREMIRDRLILSEKDDPLLMLREQFIVALQYIASEPRQYALLQILYHKCEFH DDVISECEIRKRIGLNDDYLRRTLRQCIARNVISSQTNIELALIVFHAFFSGVIKNWLMD SNSFSLYKQAPALVDNILATLHITRVAPVVYDTAS >gi|333596725|gb|GL892087.1| GENE 1797 1984305 - 1985444 682 379 aa, chain + ## HITS:1 COG:acrE KEGG:ns NR:ns ## COG: acrE COG0845 # Protein_GI_number: 16131153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 379 1 384 385 511 76.0 1e-144 MTNHFRCLPLYGFIVCAALLTGCDGQENPQQHAQAPQVSVHIVKSAPLAVTTELPGRTDA YRVAEVRPQVSGIILHRNFTEGSDVKAGESLYQIDPATYQAAYDNAKGELVKAQAAANIA HLTVKRYVPLVGTQYVSKQEYDQAVATAQQADASVVAAKAGVESARINLAYTKVTSPING RIGKSSVTEGALVTNGQSTALATVQQLDPIYVDVTQSSSDFMRLKQQTSLQKGDTSSVEL LMENGQPYPLKGTLQFSDVTVDESTGSITLRALFPNPQHMLLPGMFVRARIDEGTQPDAI LVPQQGVTRTPRGDATVLVVNEKNQVESRTVVAPQAIGDRWLITEGLKNGDRVIISGLQK VRPGVTVVAIPDTAATPAS >gi|333596725|gb|GL892087.1| GENE 1798 1985456 - 1988569 2869 1037 aa, chain + ## HITS:1 COG:STM3391 KEGG:ns NR:ns ## COG: STM3391 COG0841 # Protein_GI_number: 16766686 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1037 1 1037 1037 1778 87.0 0 MANFFIQRPVFAWVLAIILMIAGGLAILKLPVAQYPTIAPPAVAVTATYPGADAQTVQDT VTQVIEQNMNGIDNLMYMSSTSDSAGNVTITLTFESGTDPDIAQVQVQNKLQLAMPLLPQ EVQQQGIGVEKSSSSFLLVAGFVSDNKNLTQDDISDYVASNVKDAISRTSGVGDVQLFGA QYAMRIWLDSNAMNKYQLTPLDVINQLKTQNDQIAAGQLGGTPSVPGQQLNASIIAQTRL KSPEEFGRVTLKVNQDGSMVRLKDVARIELGGENYNMVTKINGQAATGLGIKLATGANAL DTAAAIKSKLAQLQPFFPQGLKVVYPYDTTPFVKISIHEVVKTLFEAIVLVFLVMYLFLQ NLRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM VEDKLPPKEATQKSMEQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSLTIVSAMAL SVLVALILTPALCATLLKPVSSEHHEKKGGFFGWFNALFDKSVEHYSNSVSGILRKTGRY LLVYVIIVGGMAVLFLRLPTSFLPEEDQGVFMTMVQLPAGATQMRTQQVLDQVQDYYLTK EKANVESVFTVNGFSFSGQGQNSGIAFVSLKPWEERPGKENGVGAIVSRATKAFSQIKDG LVFPFNLPAIIELGTATGFDFELIDQANLGHTQLTQARNQLLGMVREHPDLLVRVRPNGL EDTPQFKLDVDQEKAQALGVSVADVNQTISTALGGTYVNDFIDHGRVKKVYVQADARFRM LPGDINDLYVRSANGEMVPFSAFSSSHWVYGSPRLERYNGMPSMEILGESAPGKSTGEAM ALMESLASKLPSGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV MLVVPLGVIGALLAASMRGLNNDVFFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGII EATLEASRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMLSATLLAIFF VPVFFVVVRRRFTKHKD >gi|333596725|gb|GL892087.1| GENE 1799 1988818 - 1989039 149 73 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3706 NR:ns ## KEGG: Ent638_3706 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 73 1 73 73 108 94.0 6e-23 MKRFLSVALLAALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA IAGLTLGIVALTK >gi|333596725|gb|GL892087.1| GENE 1800 1993559 - 1994113 466 184 aa, chain + ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 184 73 256 256 336 86.0 1e-92 MFAVLRPYKDLFPQKGDRVMIDASSVVIGDVRMADDVSIWPLVAIRGDVNYVAIGARTNI QDGSVLHVTHKSSYNPEGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGVIVED DVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLKEAEIEGLKYSANNYVKWKNDYLDQDN QTQP >gi|333596725|gb|GL892087.1| GENE 1801 1994089 - 1994337 99 82 aa, chain - ## HITS:1 COG:no KEGG:Ent638_3712 NR:ns ## KEGG: Ent638_3712 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 82 1 82 82 134 81.0 1e-30 MNQAIHFPDREIWDENKQAVCFPVLVHGMQLTCAIKRETLLQRFGGSDPLAVFCENRWDL EEEASDLIRDQQEDDQGWVWLS >gi|333596725|gb|GL892087.1| GENE 1802 1994334 - 1995152 650 272 aa, chain - ## HITS:1 COG:aroE KEGG:ns NR:ns ## COG: aroE COG0169 # Protein_GI_number: 16131162 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 272 1 272 272 461 82.0 1e-130 METYAVFGNPIAHSKSPLIHQLFAEQLQIDHPYGRVLAPVDAFIPTLNSFFDAGGKGANV TVPFKEEAFGYADELTERASLAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIKPGF RILLIGAGGASRGVLLPLLSLDCAVTITNRTFSRAEELAALFAHTGSVTAVALDDLAGHE FDLVINATSSGINGEIPAIPASLIHSHIFAYDMFYQKGKTPFLTWCEQQGAKHLADGLGM LVGQAAHAVLLWHGVLPSVEPVIEKLKQELTA >gi|333596725|gb|GL892087.1| GENE 1803 1995157 - 1995729 296 190 aa, chain - ## HITS:1 COG:STM3402 KEGG:ns NR:ns ## COG: STM3402 COG0009 # Protein_GI_number: 16766691 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Salmonella typhimurium LT2 # 1 190 1 190 190 315 83.0 4e-86 MNNNLPSGSIAQAVETLKKEEVIAYPTEAVFGVGCDPDSEVAVNRLLALKQRPVEKGLIL IAASYEQLKPYIDDSMLTPAQRETIFSAWPGPVTFVFPAQPTTPRWLTGRFDSLAVRVTD HPLVVELCQAFGKPLVSTSANLTGLPPCRTTEEVLAQFGNDFPVAVGETGGRLNPSEIRD ALTGERFRQG >gi|333596725|gb|GL892087.1| GENE 1804 1995734 - 1996276 156 180 aa, chain - ## HITS:1 COG:STM3403 KEGG:ns NR:ns ## COG: STM3403 COG0551 # Protein_GI_number: 16766692 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 298 87.0 3e-81 MAKSALFTVHKNEPCPQCGAELVIRSGKHGPFLGCSHYPECDYVRPLKSQADGHIVKILE GQLCPFCGGELALRQGRFGMFIGCSRYPECEHTEQIDKPDETAIACPQCQRGQLVQRRSR YGKTFHSCDRYPECQFVINFKPVAGVCPHCDYPLLIEKKTAQGLKRFCASKQCGKPVSAD >gi|333596725|gb|GL892087.1| GENE 1805 1996303 - 1996776 488 157 aa, chain - ## HITS:1 COG:STM3404 KEGG:ns NR:ns ## COG: STM3404 COG2922 # Protein_GI_number: 16766693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 261 92.0 3e-70 MFDVLMYLFETYIHNEAEMQVDQDKLTRDLTDAGFEREDIYNALMWLDKLADYQDGLAEP MQLASDPLSVRIYTAEECERLDASCRGFILFLEQIQVLNLETREMVIERVMALDTAEFEL EDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >gi|333596725|gb|GL892087.1| GENE 1806 1996748 - 1997551 146 267 aa, chain - ## HITS:1 COG:STM3405 KEGG:ns NR:ns ## COG: STM3405 COG0758 # Protein_GI_number: 16766694 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Salmonella typhimurium LT2 # 2 267 109 374 374 412 78.0 1e-115 MQLAVVGSRAPSWYGERWGKMLSEQLSQCGFTITSGLACGIDGVAHHAALSAKGRSVAVL GNGLFSIYPRRHHILAEQLIASEGAIVSEFSLSSPPRPGNFPRRNRIISGLSQGVLVVEA AIRSGSLVTARCALEQGREVFALPGPLGNPGCEGPHWLIKQGATLVTCKEDILENLQYGL HWLQDDRQKRHISSDQEAVALPFPKLLANVGDEVTPVDVVAERAGQPVPVTVAQLLELEL AGWIAAVPGGYVRLRRACHVRRTDVFV >gi|333596725|gb|GL892087.1| GENE 1807 1998000 - 1998509 420 169 aa, chain + ## HITS:1 COG:STM3406 KEGG:ns NR:ns ## COG: STM3406 COG0242 # Protein_GI_number: 16766695 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Salmonella typhimurium LT2 # 1 169 1 169 169 280 94.0 9e-76 MAVLQVLHIPDERLRIVAEPVKEVNAEIQRIVDDMFDTMYAEEGIGLAATQVDIHKRIIV IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGNPFE LEADDLLAICIQHEMDHLVGKLFIDYLSPLKQQRIRQKVEKLDRLRSRA >gi|333596725|gb|GL892087.1| GENE 1808 1998674 - 1999480 388 268 aa, chain + ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 267 48 314 315 462 87.0 1e-130 MPGPVKVLAETHGLPVFQPASLRPQENQQLVADLNADVMVVVAYGLILPKAVLDMPRLGC INVHGSLLPRWRGAAPIQRALWAGDAETGVTIMKMDVGLDTGDMLYKLSCPITSEDTSAT LYDKLADLGPQGLIETLQQLADNTAKPEVQDEAHVTYAEKLSKEEARIDWSLSAAQLERC IRAFNPWPMSWLMIDEQPVKVWKASVINGNTSAEPSTIIDASKNGIQVATGEGILNLESL QPAGKKAMSAQDLLNSRREWFIPGNRLA >gi|333596725|gb|GL892087.1| GENE 1809 1999557 - 2000819 963 420 aa, chain + ## HITS:1 COG:sun KEGG:ns NR:ns ## COG: sun COG0144 # Protein_GI_number: 16131168 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 420 10 429 429 739 85.0 0 MAAQAVEQVIEQGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLINKLMSRP MSGKQRTVHYLIMVGFYQLLHTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQ DELLAEFAQSEARFLHPEWLLNRLKKAYPQQWKDIADANNQRPPMWVRVNRNHHTRDAWL ALLEEAGMGGFTHAAYPDAVRLASAAPVHALPGFEEGWVTVQDASAQGCMTWLEPKDGEQ ILDLCAAPGGKTTHILEVAPRANVMAVDVDEQRLSRVYDNLKRLGMKAQVKQGDGRTPAD WCGDTRFDRILLDAPCSATGVIRRHPDIKWLRRDRDIKELAQLQSEILDAIWPHLKPGGT LVYATCSVLPEENSQQIAAFLKRTPDATLHDTGTPEHPGLQNLPGAEEGDGFFYAKLIKK >gi|333596725|gb|GL892087.1| GENE 1810 2000842 - 2002218 1139 458 aa, chain + ## HITS:1 COG:STM3409 KEGG:ns NR:ns ## COG: STM3409 COG0569 # Protein_GI_number: 16766698 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Salmonella typhimurium LT2 # 1 458 1 458 458 854 97.0 0 MKIIILGAGQVGGTLAENLVGENNDITIVDTNGDRLRVLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSPDYVRDAEKLFNSEAVPID HLIAPEQLVIDSIYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLIGNALSTMREHMPH IDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGG GNIGAGLARRLEKDYSVKLIERDQQRASELAEKLQNTIVFYGDASDQELLAEEHIDQVDL FIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRKAYVDLVQGSVIDIAISPQQATISALLS HVRKADIVGVSSLRRGVAEAIEAVAHGDETTSRVVGRAIDEIKLPPGTIIGAVVRGNDVM IANDNLRIEQGDHVIMFLTDKKFITDVERLFQPSPFFL >gi|333596725|gb|GL892087.1| GENE 1811 2002365 - 2002778 381 137 aa, chain + ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 136 1 135 136 231 95.0 4e-61 MSFIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAFT LREAQGDIPAVVMHYGVFIQNVFDFVIVAFAIFMAIKLINRLNRKKEEPAAAPPAPTKEE VLLTEIRDLLKEQNNRV >gi|333596725|gb|GL892087.1| GENE 1812 2002779 - 2002994 204 71 aa, chain - ## HITS:1 COG:STM3411 KEGG:ns NR:ns ## COG: STM3411 COG3036 # Protein_GI_number: 16766700 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 66 1 66 89 112 87.0 2e-25 MSRYQHTKGQIKDNAIVALLHDPLFRQRIEKNKKGKGSYLRKGKHAQRGNWEASGKQANR FFTTGLSVSVA >gi|333596725|gb|GL892087.1| GENE 1813 2003052 - 2003477 322 141 aa, chain - ## HITS:1 COG:STM3412 KEGG:ns NR:ns ## COG: STM3412 COG0789 # Protein_GI_number: 16766701 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 141 1 141 141 239 91.0 1e-63 MYRIGELAKLANVTPDTIRYYEKQQMIDHEVRTEGGFRLYTDNDLQRLRFIRYARQLGFT LESIRELLSIRIDPEHHTCQESKSIVQARLDEVEARIHELQTMQRSLQRLNDACCGTAHS SVYCSILEALEQGASSETQGC >gi|333596725|gb|GL892087.1| GENE 1814 2003480 - 2003848 141 122 aa, chain - ## HITS:1 COG:no KEGG:ECL_04670 NR:ns ## KEGG: ECL_04670 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 122 1 122 122 200 84.0 1e-50 MWLLDQWAERHICDALNKGEFDNLPGSGEPLVLDDDSHVPPELRAGYRLLKNAGCLPPEL QQRNEAVELADLLKGIHKDDPRFSEISRRLALIELKLRQTGMKTDFLHGEYSERLMQKIN EE >gi|333596725|gb|GL892087.1| GENE 1815 2003955 - 2004338 636 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 [Escherichia coli O157:H7 EDL933] # 1 127 1 127 127 249 100 3e-64 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE KAEAAAE >gi|333596725|gb|GL892087.1| GENE 1816 2004379 - 2005368 962 329 aa, chain - ## HITS:1 COG:YPO0234 KEGG:ns NR:ns ## COG: YPO0234 COG0202 # Protein_GI_number: 16120572 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Yersinia pestis # 1 329 1 329 329 611 99.0 1e-175 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|333596725|gb|GL892087.1| GENE 1817 2005394 - 2006014 1030 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972204|ref|YP_001337350.1| 30S ribosomal protein S4 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 206 1 206 206 401 99 1e-110 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAESRQLVSH KAIMVNGRVVNIASYQVKANDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG TFKRQPERSDLSADINEHLIVELYSK >gi|333596725|gb|GL892087.1| GENE 1818 2006047 - 2006436 668 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313362|ref|YP_001178436.1| 30S ribosomal protein S11 [Enterobacter sp. 638] # 1 129 1 129 129 261 100 6e-68 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|333596725|gb|GL892087.1| GENE 1819 2006453 - 2006809 581 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 [Enterobacter sp. 638] # 1 118 1 118 118 228 98 8e-58 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEV AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|333596725|gb|GL892087.1| GENE 1820 2006956 - 2007072 198 38 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 [Escherichia coli O157:H7 EDL933] # 1 38 1 38 38 80 100 2e-13 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG >gi|333596725|gb|GL892087.1| GENE 1821 2007104 - 2008435 1262 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 14 440 15 444 447 490 57 1e-137 MAKQPGLDFQSAKGGFGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPALAELKKEGESGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVLNPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLLLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYGR >gi|333596725|gb|GL892087.1| GENE 1822 2008443 - 2008877 706 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16131180|ref|NP_417760.1| 50S ribosomal subunit protein L15 [Escherichia coli str. K-12 substr. MG1655] # 1 144 1 144 144 276 98 2e-72 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQNSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVSTPV TVRGLRVTKGARAAIEAAGGKIEE >gi|333596725|gb|GL892087.1| GENE 1823 2008881 - 2009060 294 59 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313367|ref|YP_001178441.1| 50S ribosomal protein L30 [Enterobacter sp. 638] # 1 59 1 59 59 117 100 1e-24 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAVRGMVNAVYFMVKVEE >gi|333596725|gb|GL892087.1| GENE 1824 2009067 - 2009567 829 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 [Escherichia coli O157:H7 EDL933] # 1 166 1 166 167 323 100 1e-86 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILG >gi|333596725|gb|GL892087.1| GENE 1825 2009582 - 2009935 559 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762859|ref|NP_458476.1| 50S ribosomal protein L18 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 117 1 117 117 219 97 3e-55 MDKKSARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAISE QLKYTGNKDAAAAVGKAVAERALEKGISNVSFDRSGFQYHGRVQALADAAREAGLQF >gi|333596725|gb|GL892087.1| GENE 1826 2009945 - 2010478 895 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313370|ref|YP_001178444.1| 50S ribosomal protein L6 [Enterobacter sp. 638] # 1 177 1 177 177 349 99 3e-94 MSRVAKAPVVIPAGVDVKIDGQVITIKGKNGELTRTLNKAVEVKHADNALTFGPRDGFVD GWAQAGTARALLNSMVVGVTEGFTKKLQLVGVGYRAAIKGNAVGLSLGFSHPVEHPLPAG ITAECPTQTEIVLKGADKQLIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|333596725|gb|GL892087.1| GENE 1827 2010491 - 2010883 641 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313371|ref|YP_001178445.1| 30S ribosomal protein S8 [Enterobacter sp. 638] # 1 130 1 130 130 251 100 8e-65 MSMQDPIADMLTRIRNGQAANKVAVTMPSAKLKVAIANVLKEEGFIEDFKVEGDTKPELE LTLKYFQGKAVVESIQRVSRPGLRIYKKKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|333596725|gb|GL892087.1| GENE 1828 2010914 - 2011219 510 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161506021|ref|YP_001573133.1| hypothetical protein SARI_04202 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] # 1 101 1 101 101 201 99 1e-49 MAKQSMKAREVKRVALADKFFAKRAELKAIISDVNASDEDRWNAVLKLQSLPRDSSPSRQ RNRCRQTGRPHGYVGKFGLSRIKLREAAMRGEVPGLKKASW >gi|333596725|gb|GL892087.1| GENE 1829 2011234 - 2011773 907 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762855|ref|NP_458472.1| 50S ribosomal protein L5 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 179 1 179 179 353 99 1e-95 MAKLHDYYKDEVVNKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFLERLITIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK >gi|333596725|gb|GL892087.1| GENE 1830 2011788 - 2012102 512 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 [Escherichia coli O157:H7 EDL933] # 1 104 1 104 104 201 98 8e-50 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKLVVEGINLVKKHQKPVPALNQPGGIVE KEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK >gi|333596725|gb|GL892087.1| GENE 1831 2012113 - 2012484 618 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972217|ref|YP_001337363.1| 50S ribosomal protein L14 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 123 1 123 123 242 100 4e-62 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRELRTEKFMKIISLAP EVL >gi|333596725|gb|GL892087.1| GENE 1832 2012651 - 2012905 425 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972218|ref|YP_001337364.1| 30S ribosomal protein S17 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 84 1 84 84 168 97 9e-40 MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDKVE IRECRPLSKTKSWTLVRVVEKAVL >gi|333596725|gb|GL892087.1| GENE 1833 2012905 - 2013096 295 63 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972219|ref|YP_001337365.1| 50S ribosomal protein L29 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 63 1 63 63 118 98 1e-24 MKAKELREKSVEELNAELLNLLREQFNLRMQAASGQLQQTHLLKQVRRNVARVKTLLTQK AGA >gi|333596725|gb|GL892087.1| GENE 1834 2013096 - 2013506 696 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146313378|ref|YP_001178452.1| 50S ribosomal protein L16 [Enterobacter sp. 638] # 1 136 1 136 136 272 100 3e-71 MLQPKRTKFRKVHKGRNRGLAQGTDVSFGTFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFGLA AAKLPIKTTFVTKTVM >gi|333596725|gb|GL892087.1| GENE 1835 2013519 - 2014220 1183 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] # 1 233 1 233 233 460 100 1e-127 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK >gi|333596725|gb|GL892087.1| GENE 1836 2014238 - 2014570 536 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152972222|ref|YP_001337368.1| 50S ribosomal protein L22 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 110 1 110 110 211 100 1e-52 METLAQHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH NDGADIDDLKVAKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|333596725|gb|GL892087.1| GENE 1837 2014585 - 2014863 484 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 [Escherichia coli O157:H7 EDL933] # 1 92 1 92 92 191 100 1e-46 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPV FVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK >gi|333596725|gb|GL892087.1| GENE 1838 2014880 - 2015701 1432 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762846|ref|NP_458463.1| 50S ribosomal protein L2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 273 1 273 273 556 99 1e-156 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGE MRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK >gi|333596725|gb|GL892087.1| GENE 1839 2015719 - 2016021 491 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762845|ref|NP_458462.1| 50S ribosomal protein L23 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 100 1 100 100 193 100 2e-47 MIREERLLKVLRAPHVSEKASTAMEKTNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNT LVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE >gi|333596725|gb|GL892087.1| GENE 1840 2016018 - 2016623 992 201 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 [Escherichia coli O157:H7 EDL933] # 1 201 1 201 201 386 100 1e-105 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|333596725|gb|GL892087.1| GENE 1841 2016634 - 2017263 1051 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627] # 1 209 1 209 209 409 99 1e-112 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV TKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQDISVELFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGSDLIVKPAVKA >gi|333596725|gb|GL892087.1| GENE 1842 2017296 - 2017607 514 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 [Pasteurella multocida subsp. multocida str. Pm70] # 1 103 1 103 103 202 100 4e-50 MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|333596725|gb|GL892087.1| GENE 1843 2017952 - 2018461 256 169 aa, chain + ## HITS:1 COG:ECs4188 KEGG:ns NR:ns ## COG: ECs4188 COG1989 # Protein_GI_number: 15833442 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli O157:H7 # 13 165 1 152 155 153 55.0 1e-37 MSMRSNPVEALSMLMSLPFLLIYFALSALLVRTDIRTGLLPDKFLCPLLWTGLLYQLCLH PDFLPSAVVGAMAGYAGFAVIYWGYRLICRREGMGFGDIKYLAALGAWHGWCVLPLLALV AALMALLYLTALSLFTPDRRALKNPLPFGPFLAAAGLCVGWESLINFPL >gi|333596725|gb|GL892087.1| GENE 1844 2018445 - 2018921 582 158 aa, chain - ## HITS:1 COG:STM3443 KEGG:ns NR:ns ## COG: STM3443 COG2193 # Protein_GI_number: 16766732 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Salmonella typhimurium LT2 # 1 156 1 156 158 273 96.0 1e-73 MKGDVKIISYLNKLLGNELVAINQYFLHARMFKNWGLTRLNDVEYHESIDEMKHADKYIE RILFLEGIPNLQDLGKLGIGEDVEEMLRSDLRLELEGAKDLREAIAYADSVHDYVSRDMM IQILADEEGHIDWLETELDLISKIGLQNYLQSQIKVES >gi|333596725|gb|GL892087.1| GENE 1845 2018994 - 2019188 140 64 aa, chain - ## HITS:1 COG:ZyheA KEGG:ns NR:ns ## COG: ZyheA COG2906 # Protein_GI_number: 15803851 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Escherichia coli O157:H7 EDL933 # 1 64 1 64 64 108 92.0 3e-24 MYVCLCNGVSDKKIRQAVRQFQPQSFQQLRKFVPVGNQCGKCVRAAREIMQDELMQIPEF KEIA >gi|333596725|gb|GL892087.1| GENE 1846 2020412 - 2022526 1968 704 aa, chain - ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1366 96.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQYEPHRVNIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLGANPVPLQLAIGAEEGFT GVIDLVKMKAINWNEADAGVTFEYEDIPAEMQDLADEWHQNLIESAAEASEELMEKYLGG EELSEQEIKSALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVVDYLPSPVDVPAINGILD DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTILNSVKAARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDHPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYREAIRAKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGVRLHFGSYHDVDSSELAFKLAASIA FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLRGQESEVTGVKIHAEVPL SEMFGYATQLRSLTKGRASYTMEFLKYDDAPNNVAQAVIEARGK >gi|333596725|gb|GL892087.1| GENE 1847 2022623 - 2023093 774 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|206576912|ref|YP_002236273.1| ribosomal protein S7 [Klebsiella pneumoniae 342] # 1 156 1 156 156 302 98 3e-80 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAEAIVYSALETLAQRSGKNELE AFEVALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW >gi|333596725|gb|GL892087.1| GENE 1848 2023190 - 2023564 646 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803855|ref|NP_289889.1| 30S ribosomal protein S12 [Escherichia coli O157:H7 EDL933] # 1 124 1 124 124 253 100 2e-65 MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNG FEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVK RPKA >gi|333596725|gb|GL892087.1| GENE 1849 2023689 - 2023976 293 95 aa, chain - ## HITS:1 COG:yheL KEGG:ns NR:ns ## COG: yheL COG2168 # Protein_GI_number: 16131222 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 95 1 95 95 117 64.0 7e-27 MLHTLSRSPWQCDIDTLLSMLREGDDLLLIQDGVLAALEGSRFVEILSNAPITVSALKED LDARGLSGQISAKIDVVGYTDFVNLTVTHASQMNW >gi|333596725|gb|GL892087.1| GENE 1850 2023984 - 2024343 319 119 aa, chain - ## HITS:1 COG:yheM KEGG:ns NR:ns ## COG: yheM COG2923 # Protein_GI_number: 16131223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 119 1 119 119 160 68.0 4e-40 MKRVAFVFTSAPHGSASGREGLDALLATSALTDDIGVFFVGDGVFQLLAGQQPQAILARD YIATFKVLPLYDIETFCVCADSLAARGLNEKTPFVLDVTILTSAALREQLSHYDTVLTF >gi|333596725|gb|GL892087.1| GENE 1851 2024343 - 2024714 486 123 aa, chain - ## HITS:1 COG:STM3451 KEGG:ns NR:ns ## COG: STM3451 COG1553 # Protein_GI_number: 16766740 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Salmonella typhimurium LT2 # 1 123 6 128 128 195 83.0 2e-50 MVTGPAYGTQQASSALQFAHALLDAGHELASVFFYREGVYNANQFTSPASDEFDLVRAWQ KLNETQGVDLHICVAAALRRGVTDATEAERLGLAGANLQPGFSLSGLGALAQAALTCDRV VQF >gi|333596725|gb|GL892087.1| GENE 1852 2024729 - 2025451 732 240 aa, chain - ## HITS:1 COG:yheO KEGG:ns NR:ns ## COG: yheO COG2964 # Protein_GI_number: 16131225 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 5 244 244 461 98.0 1e-130 MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSETIAIRNR EHRVIGLLCINMNLDVPFSQIMSTFIPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNA DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK >gi|333596725|gb|GL892087.1| GENE 1853 2025619 - 2026437 996 272 aa, chain - ## HITS:1 COG:ECs4198 KEGG:ns NR:ns ## COG: ECs4198 COG0545 # Protein_GI_number: 15833452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 260 1 259 270 375 89.0 1e-104 MKSLFKVTLLATTMAVALNAPLSFAADTAAKPAATTDSKAAFKNDDQKSAYALGASLGRY MENSLKEQEKLGIKLDKNQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKGAAQTKMEA DAKDNEAKGKAYRDKFAKEKGVKTSSTGLIYKVEKEGTGDAPKDSDTVVVNYKGTLIDGK EFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPDLAYGKTGVPGIPANSTL VFDVELLDIKPAPKADAKTDAPADDKAAAAKK >gi|333596725|gb|GL892087.1| GENE 1854 2026676 - 2026894 237 72 aa, chain + ## HITS:1 COG:STM3454 KEGG:ns NR:ns ## COG: STM3454 COG2900 # Protein_GI_number: 16766743 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 72 1 72 72 93 87.0 1e-19 MKDTTIEARLAELESRLAFQDITIEELNQTVTAHELEMAKLRDHMRLLTEKLKATQPSNI ASQSEETPPPHY >gi|333596725|gb|GL892087.1| GENE 1855 2026946 - 2027554 690 202 aa, chain - ## HITS:1 COG:STM3455 KEGG:ns NR:ns ## COG: STM3455 COG1047 # Protein_GI_number: 16766744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Salmonella typhimurium LT2 # 1 151 1 151 196 265 99.0 3e-71 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDV AVGANDAYGQYDDNLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITEVEDDHVVVD GNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHGHDHDHGHDHDHDHGHDGCCGGHG HDHGHDHGHGKGGCGNGGCGCH >gi|333596725|gb|GL892087.1| GENE 1856 2027649 - 2027849 154 66 aa, chain - ## HITS:1 COG:Z4708 KEGG:ns NR:ns ## COG: Z4708 COG3529 # Protein_GI_number: 15803863 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 117 92.0 4e-27 MAVRKRFIAGAKCPSCQAQDTLAMWRENNIDIVECVKCGHQMREADKEARDHVRKEEQVI GIFHPD >gi|333596725|gb|GL892087.1| GENE 1857 2027863 - 2029668 1053 601 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 590 9 612 618 410 36 1e-112 MDGSNLLLAGVLFLFAAVVAVPLAARLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFS ELGVVFLMFIIGLELNPSKLWQLRQSIFGVGAAQVLLSAAILAGLLMLTQFSWQAAVIGG IGLAMSSTAMALQLMRDKGMNRNEAGQLGFSVLLFQDLAVIPALALVPLLAGSGDDHFDW MKISMKVLAFAGMLIGGRFLLRPVFRFIAASGVREVFTAATLLLVLGSALFMGALGLSMA LGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMALNLGVLYTHLLWVIASVAV LVAVKSLVLYLLARIYGLRSSERMQFSTVLSQGGEFAFVLFSTASSQKLFKDDQMALLLV TVTLSMMTTPLLMKLVDKLLSRRLNPADDEGEAPWVEDDKPQVIVVGFGRFGQVIGRLLM ANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRSAGAEAAESIVITCNDPEDTMK LVELCQQHFPHLHILARARGRVEAHELLQAGVKHFSRETFSSALELGRKALVSLGMHPHQ AQRAQMHFRRLDMRMLRELMPVHSDTAQISRVREARRELEEIFQREMQQERRQLDGWDEF E >gi|333596725|gb|GL892087.1| GENE 1858 2029668 - 2030219 639 183 aa, chain - ## HITS:1 COG:ECs4202 KEGG:ns NR:ns ## COG: ECs4202 COG2249 # Protein_GI_number: 15833456 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 329 87.0 2e-90 MSQTAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPYEQELLRQ HDVIVFQHPLYTYSCPALLKEWLDRVLSRGFSSGVGGNQLAGKYWRSVITTGEPESAYRH DGLNRYPMSDILRPFELTAAMCRMHWMSPIIVYWARRQDPKALASHARAYGEWLASPIPA GGR >gi|333596725|gb|GL892087.1| GENE 1859 2030352 - 2032256 2615 634 aa, chain + ## HITS:1 COG:ECs4203 KEGG:ns NR:ns ## COG: ECs4203 COG0488 # Protein_GI_number: 15833457 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 631 1 631 637 1128 91.0 0 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGNFTF PGNWQLAWVNQETPALSEPALDYVIDGDREYRKLEAELNAANERNDGHAIATIHGKLDAI DAWTIRSRASSLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLEKWLKSYQGTLILISHDRDFLDPVVDKIIHIEQQSMFEYTGNYSSFERQRAT RLAQQQAMYESQQQRVAHLQSFVDRFKAKASKAKQAQSRIKMLERMEMIAPAHVDNPFHF SFREPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELNPVSGEIGLAKGIKLGYFAQHQLEFLRADESPIQHLARLAPQEMEQKLRDYLGGFGFQ GDKVTENTERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLIRSTTDDLYLVHGGKVEPFDGDLEDYQQWLTDVQKQENQPEESAKDNANSA QARKDQKRREAELRTQTQPLRKEIVRLEKEMEKLNATLAAVEEKLGDSELYDQSRKAELT DCLQTQAKTKSSLEACEIAWLDAQEQLEAMLQAD >gi|333596725|gb|GL892087.1| GENE 1860 2032272 - 2033204 896 310 aa, chain + ## HITS:1 COG:PA0217 KEGG:ns NR:ns ## COG: PA0217 COG0583 # Protein_GI_number: 15595414 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 310 6 307 309 277 48.0 2e-74 MGFDTTSEITFRKLSIFMTFMEKGNIARTAETLGLSGVSVHRALHTLEENVRCPLFTHKG RNLIALPSAWTLLEYCQEVMQVMERGLEESRKIAGIGQGRLRVGTLYSLTLETVPRLIMG MKLRRPDLEMDLTMGSNETLLHMLDEGSLDAILISISESDIDRNSLEVLPLFHDDIFLAA PASATLNTSGPADLRDYKDQKFVALAEGFATYAGFQEAFHIAGFEPEIVTRVNDIFSMLS LVQAGVGFTLMPGRMKKVYENSVQLLKLAQPYQMQQLIAIVFARNREQDPSLRALAAEGR MYARSLQDGA >gi|333596725|gb|GL892087.1| GENE 1861 2033300 - 2034196 1018 298 aa, chain - ## HITS:1 COG:PA0214 KEGG:ns NR:ns ## COG: PA0214 COG0331 # Protein_GI_number: 15595411 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Pseudomonas aeruginosa # 1 270 1 280 310 234 56.0 1e-61 MKILFTFPGQGTQHEGMLQNLPGTELEQARAVLGAEVDTLDSEGALTHTRAVQLSLLIAG VAWARELERRGVSPDIVSGLSIGAYPAAVIAGALEFTDALKLVALRGDLMEQAYPHGYGL TAIMGLTLPQVENLIQGTGTYIANLNAETQIVIAGADDGMAQVAERALAKGASKAKRLAV SVPSHCALLAEPAKKLAAAFESVTLSRPRCAYLSGSTGRVLWQPEKIADDLAMNMARTVR WQEAVISANEREARLAIEMPPGGILTCLTRQAAWEGESISLERSGVDVAVHLAGRLRA >gi|333596725|gb|GL892087.1| GENE 1862 2034196 - 2034813 578 205 aa, chain - ## HITS:1 COG:no KEGG:ECL_04721 NR:ns ## KEGG: ECL_04721 # Name: not_defined # Def: phosphoribosyl-dephospho-CoA transferase # Organism: E.cloacae # Pathway: not_defined # 1 205 1 205 205 338 89.0 8e-92 MTTTLRPHDLIWLTARDALEGITESWVDAAWHTGLPVVVRRDVDIEGRIPVGVRGLRRDQ RAAGWVKPENVLRVVSPEDLSVAADLLRSPFVTQPPVQVALQLAQQSWPWTWGITGSTGY ALATGIPVIHADSDLDLLIRAPRAVSPDAFTGWQVQLSRALCRADTQVDTPEGGFALAEW LRDGKTLLKTQCGPRLVADPWHREE >gi|333596725|gb|GL892087.1| GENE 1863 2034816 - 2035775 1296 319 aa, chain - ## HITS:1 COG:BS_ywkB KEGG:ns NR:ns ## COG: BS_ywkB COG0679 # Protein_GI_number: 16080757 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus subtilis # 5 317 6 319 319 114 26.0 3e-25 MTYVIVHALAPIFVIMLLGFWAGKAKMVDNKNVSLLNIFVMDFALPAALFSATVQTPWTG IVAQSPLILVLTLAMWITYAVIYFLATKVFKKSPQDAAVLTLTVALPNYAALGLPILGSV LGEGPSTSLSVAVSIACGSVLMTPFCLLILEREKARAEGNNSGSTLSMLPVLMWRSIKKP IVMGPLLGVILSAIGIKMPELVLAAIKPLGLSATAAALFLTGVILSERKLQINTMVITST IAKLLIQPAIAWGIVLIFGLHGSVAITAILMIALSAGFFGVVFGNRFGVQSPDAEAVLLL SSVLCILSLPLFISLTSGM >gi|333596725|gb|GL892087.1| GENE 1864 2035899 - 2036699 1096 266 aa, chain - ## HITS:1 COG:no KEGG:ECL_04723 NR:ns ## KEGG: ECL_04723 # Name: not_defined # Def: malonate decarboxylase gamma subunit # Organism: E.cloacae # Pathway: not_defined # 1 266 1 266 266 443 96.0 1e-123 MSNAMSRGERWLETLAPNAKRIEGLCPSVQAADGELNGETVRFVAVVPDANNHFPRAAQG EVGLLEGWTLAKVVSETVAADADKAVKRPIVAVIDVPSQAYGRREEAFGIHQALAGAAAA YANARLAGHPVIGLIVGKAMSGAFLAHGYQANRLIAFNDKGVLIHAMGKESAARITLRTV EALEKLAATIPPMAYDISNYATLGLLSDLLDISNPDAPSESDLTRVKTTLQQAISDARQD STLKNRLGADNRRSSALVRERMRASW >gi|333596725|gb|GL892087.1| GENE 1865 2036699 - 2037532 1336 277 aa, chain - ## HITS:1 COG:PA0211 KEGG:ns NR:ns ## COG: PA0211 COG0777 # Protein_GI_number: 15595408 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Pseudomonas aeruginosa # 6 272 12 278 287 347 70.0 2e-95 MRDDSSFIELKARQRAQALLDDGSYRELLDPFEGIISPWLGPQGIVPQADDGMVVAKGTI NGQPAVVVAIEGTFQGGSMGEVSGAKMAAALELAAEDNRNGIPTQAVLCLETGGVRLQEA NLGLAAIADIHAAIVDLRRYTPVVGIVAGTVGCFGGMSIAAALCSYLIVTREARLGLNGP QVIEQEAGIEEYDSRDRPFIWSMTGGEVRYESGLVDALVGDGVNAVKAAMNDAIAKGVPA KHRTDNYDDYLNRLTNFDTRKQADAEQIKALFAREVK >gi|333596725|gb|GL892087.1| GENE 1866 2037525 - 2037824 367 99 aa, chain - ## HITS:1 COG:no KEGG:ECL_04725 NR:ns ## KEGG: ECL_04725 # Name: not_defined # Def: malonate decarboxylase delta subunit # Organism: E.cloacae # Pathway: not_defined # 1 99 1 99 99 170 91.0 2e-41 MEKITLTVPASREVSGRALAGVVGSGDMEVLFTAEPGQTLTIDITTSVDNSRGRWEALFN RLQTVSSLPAGKLTIHDFGATPGVARIRIEQVFEGVNYA >gi|333596725|gb|GL892087.1| GENE 1867 2037834 - 2038691 838 285 aa, chain - ## HITS:1 COG:PA0209 KEGG:ns NR:ns ## COG: PA0209 COG1767 # Protein_GI_number: 15595406 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Pseudomonas aeruginosa # 13 278 16 282 293 223 58.0 3e-58 MKLLPQIQVEGGAEWLARTATQCLIDEARLSPKPGLVDSRGNGAHHDLSLALMERSAHSL TPTFQALAQQSWQRPADIALRQTVGRLGREGERQMMAATDGVNTHRGAIWALGLLVSAVA MLGGDARAQTVANTAAQLAKLPDDAAPKVFSKGLRVTHRYRVPGAREEAQQAFPHIMQRA LPQLRLSRLNGSSETQARLDALMAIMTSLTDTCVLSRAGMEGLDAMQSGARAVLNAGGCA TLAGQQALARLDRQMLTLNASPGGAADLLAATLFLDRVETPYSKH >gi|333596725|gb|GL892087.1| GENE 1868 2038691 - 2040346 1963 551 aa, chain - ## HITS:1 COG:no KEGG:ECL_04727 NR:ns ## KEGG: ECL_04727 # Name: not_defined # Def: putative malonate decarboxylase, alpha subunit # Organism: E.cloacae # Pathway: not_defined # 1 551 1 551 551 1134 99.0 0 MLSGQTPTRQWNTRRSEKARRLASVPVQGKVLPTGDLVAMLEKLIAPGDKVVLEGNNQKQ ADFLSRSLAEVNPQIVHDLHMIMPSVGRSEHLDIFEKGIARKLDFSFSGTQSLRISQLLE DGQLEIGAIHTYIELYSRLYVDLSPNVALIAGFKADRKGNLYTGASTEDTPALVEAAAFH DGIVIAQVNELVDDECDLPRVDIPGSWIDYVVVADKPFFIEPLFTRDPRLIKQEHILMAM MAIKGIYAEHQVQSLNHGIGFNTAAIELLLPTYGEQLGLKGKICKHWTLNPHPTLIPAIE SGWVESVHCFGGELGMEEYIRARPDVFFTGADGSMRSNRAFCQLAGQYAVDMFIGSTLQV DGYANSSTVTRGRLSGFGGAPNMGHDPHGRRHATPAWLNMITEPDPMQRGKKLVVQMVET FQAGVKPTFVEKLDAVDVAKASGMPLAPVMIYGDDVTHVLTEEGIAYLYRAKDLEERRAM VAAVAGITDIGLGVDARRVAELRQSGKVVYPEDMGIRRTDATRSLLAAGSVADLVEWSGG LYNPPAKFRSW >gi|333596725|gb|GL892087.1| GENE 1869 2040575 - 2041597 1057 340 aa, chain + ## HITS:1 COG:STM3462 KEGG:ns NR:ns ## COG: STM3462 COG0429 # Protein_GI_number: 16766750 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Salmonella typhimurium LT2 # 1 338 16 353 355 570 78.0 1e-162 MTQIIPSDFDIAAEESAEFVPMRGVANPHLQTMLPRLIRRKLQFTPHWQRLDLPDGDFLD LAWSEDPDRARHKPRLVVFHGLEGSLHSPYAHGLIEAAKARGWLGVVMHFRGCSGEPNRQ KRIYHSGETEDGTWFLRWLRDRFGEVPTAAVGYSLGGNMLACLLAKESDAVPLEAAVIVS APFMLEQCSYHMEKGFSRVYQRYLLNLLKANAARKLKAYPDTLPVTLQQLKRVKRLREFD DLITSKIHGFADAIDYYRQCSAMPLLNQITKPTLIIHAKDDPFMDHHSIPAPEHLPANVE YQLTQFGGHVGFVGGTLRRPKMWLETRIPDWLTAYLDGKK >gi|333596725|gb|GL892087.1| GENE 1870 2041594 - 2041812 248 72 aa, chain + ## HITS:1 COG:ECs4205 KEGG:ns NR:ns ## COG: ECs4205 COG3089 # Protein_GI_number: 15833459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 70 1 70 72 120 85.0 8e-28 MIIPWQDLSPETLDNLIESFVLREGTDYGEHERSLEQKVNDVKRQLKSGDVVLVWSELHE TVNIMPRNAFHG >gi|333596725|gb|GL892087.1| GENE 1871 2041843 - 2042712 1109 289 aa, chain + ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 288 1 288 289 559 93.0 1e-159 MSARHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLRAAEVEGDSFHRYTRPEMDMAIRKAR DLGKHISYFGPEANDFGLLEQTFREYGQSGTGQSRKYLHTYDEAVPWNQVPGTFTPWQPL PEPTDVLFYEGLHGGVVTPQHDVARHVDLLVGVVPIVNLEWIQKLTRDMSERGHSREAVM DSVVRSMEDYINFLTPQFSRTHINFQRVPTVDTSNPFAAKSIPSLDESFVVIHFRNLEGI DYPWLLAMLQGSFISHMNTLVVPGGKMGLAMELIMTPLVQRLMEGKQIA >gi|333596725|gb|GL892087.1| GENE 1872 2042799 - 2043203 411 134 aa, chain - ## HITS:1 COG:ECs4207 KEGG:ns NR:ns ## COG: ECs4207 COG1765 # Protein_GI_number: 15833461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 247 94.0 5e-66 MQARVKWVEGLTFLGESASGHQVLMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR HDVTDCEVKLTSERREEAPRLFTHINLHFIVTGKALKDAAVSRAVDLSAEKYCSVALMLE KAVNITHSYEVIEA >gi|333596725|gb|GL892087.1| GENE 1873 2043514 - 2044146 700 210 aa, chain + ## HITS:1 COG:STM3466 KEGG:ns NR:ns ## COG: STM3466 COG0664 # Protein_GI_number: 16766754 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Salmonella typhimurium LT2 # 1 210 1 210 210 418 100.0 1e-117 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQ MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|333596725|gb|GL892087.1| GENE 1874 2044204 - 2046291 2336 695 aa, chain + ## HITS:1 COG:STM3467 KEGG:ns NR:ns ## COG: STM3467 COG1289 # Protein_GI_number: 16766755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 693 1 693 695 1190 84.0 0 MWRRLIYHPEVNYALRQTLVLCLPVAVGLILGHLQQGLLFSLVPACCNIAGLDTPHKRFF KRLIIGGCLFAGCSLAVQLLLARDIPLPLILTVLAMTLGVTAEISSLHARLLPASLIAAI FTLSLAGNMPVWEPLLIYALGTLWYGLFNWFWFWLWREQPLRESLSLLYVQLAEYCEAKY TLLTQHTDPEKSLPPLLARQQKVVDLISQCYQQLHMLAANKNHEYKRLLRTFQVGLDLQE HISVSLHNPEEVQKLVERSHAEAVIRWNAQTVAARLRVLADDILYHRYPTRFNMDKQLGA LEKIARQHADNPVGQFAAWHFSRIARVLRTQRPLYARDLMADKQKRLPLLPALKSYLSLK SSALRNAARISVMLSIASLMGMALHLPKPYWILMTVLFVTQNGYGATRVRILHRAGGTMA GLIIAGVTLHFHVPEGYTLAGMLAITLVSYLIIRKNYGWAMVGFTVTAVYTLQLLTLNGE QFIIARLVDTLIGCLIAFGGMVWLWPQWQSGLLRQNAHDALEADQQAIRLILSDDPQPSP LAYERMKVNQAHNALFNSLNQAMQEPGFNAHYLADMKLWVTHSQFIVEHINAMTTLAREH TMLTPDLAQRYLQSCEIALQRCQQRLEYDAPGESGDSNILEAPETLTHGPMSTLEQHLQR VLGHLNTMHTISSVAWRQRPHHGIWLTRRLKRTAY >gi|333596725|gb|GL892087.1| GENE 1875 2046288 - 2047523 1472 411 aa, chain - ## HITS:1 COG:argD KEGG:ns NR:ns ## COG: argD COG4992 # Protein_GI_number: 16131238 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 6 409 1 404 406 742 89.0 0 MDGHDMATEQPAITRATFDEVILPIYAPAEFIPVKGRGSRVWDQQGNEYVDFAGGIAVTA LGHCHPALVDALKTQGETLWHTSNVFTNEPALRLGRKIIDATFAERVLFMNSGTEANETA FKLARYYATTRHSPYKTKIIAFHNAFHGRSFFTVSVGGQPKYSDGFGPKPADIIHVPFND LHAVKAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDEHQALLVFDEVQCGMGRT GDLFAYMHYGVTPDILTSAKALGGGFPVSAVLTTQDIASAFHVGSHGSTYGGNPLACAVA GAAFDIINTPDVLKGVNAKRDLFVKHLQHIDEQFDVFSEIRGMGLLIGAELKPQYKGRAR DFLHAAAHEGVMVLNAGPDVMRFAPSLVVEDKDIEDGLTRFAAAVAKIVSG >gi|333596725|gb|GL892087.1| GENE 1876 2047596 - 2048159 670 187 aa, chain - ## HITS:1 COG:ECs4211 KEGG:ns NR:ns ## COG: ECs4211 COG0512 # Protein_GI_number: 15833465 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 342 81.0 2e-94 MILLIDNYDSFTWNLYQYFCELGAEVVVRRNDEIALADIDALAPQKIVISPGPCTPSESG ISLEAIRHYAGRVPILGVCLGHQAIAQVFGATIVRAAKVMHGKTSPVTHTGTGVFSGLNN PLTVTRYHSLVIDPPTLPSCFEVTAWSESQEIMGIRHREYDLEGVQFHPESILSEQGHAL LANFLNR >gi|333596725|gb|GL892087.1| GENE 1877 2048190 - 2048774 440 194 aa, chain - ## HITS:1 COG:ECs4212 KEGG:ns NR:ns ## COG: ECs4212 COG2184 # Protein_GI_number: 15833466 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Escherichia coli O157:H7 # 40 193 46 199 200 218 66.0 4e-57 MKKLTDKQKSRLWEQQRNVNFQASCLLEKGKGPAKPDIETLELGPSAPGLPHLCLIHRHL FRNEMKGAGELRTADISKGDIPFCHFEYIEKVGNELMAALESDKYLVGLEKEEFTDRISH YYCEINMLHPFMSGNGVAQRIFFEQLAIHAGYVLNWQGIDPDGWASANQSGAMGDLTALN AIFAKVVSEARESA >gi|333596725|gb|GL892087.1| GENE 1878 2048882 - 2049454 661 190 aa, chain - ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 338 92.0 5e-93 MLKSTLAAVAAVFALSAVSPAALAAKGDPHVLLTTSAGNIELELDSQKAPVSVKNFLDYV NSGFYNNTTFHRVIPGFMIQGGGFNEQMQQKQPNPPIKNEADNGLLNKRGTISMARTADK DSATSQFFLNVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVQTHDVGPYQNVPSKP VVILSAKVLP >gi|333596725|gb|GL892087.1| GENE 1879 2049733 - 2050917 1613 394 aa, chain + ## HITS:1 COG:STM3473 KEGG:ns NR:ns ## COG: STM3473 COG0477 # Protein_GI_number: 16766761 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 394 1 393 393 613 89.0 1e-175 MTNSNRIKLTWISFFSYALTGALVIVTGMVMGNIAEYFQLPVSSMSNTFTFLNAGILISI FLNAWLMEIVPLKTQLRFGFVLMIAAVAGLMLSHSIALFSAAMFVLGLVSGITMSIGTFL ITHMYEGRQRGARLLFTDSFFSMAGMIFPMVAAYLLARSIEWYWVYACIGLVYVAIFILT FGCEFPVLGKKAQTTSEPVAKEKWGIGVLFLSIAALCYILGQLGFISWVPEYAKGLGMSL NDAGKLVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGLATVLMYLFINGSPEHMPWFI LTLGFFSSAIYTSIITLGSLQTKVASPKLVNFVLTCGTIGTMLTFVVTGPIVAHSGPLAA LHTANGLYAVVFIMCFVLGFVTRHRQHNPATATH >gi|333596725|gb|GL892087.1| GENE 1880 2051179 - 2053722 3276 847 aa, chain + ## HITS:1 COG:STM3474 KEGG:ns NR:ns ## COG: STM3474 COG1251 # Protein_GI_number: 16766762 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Salmonella typhimurium LT2 # 1 847 1 847 847 1665 94.0 0 MSKVRLAIIGNGMVGHRFIEDLLDKADANQFDITVFCEEPRKAYDRVHLSSYFSHHTAEE LSLVREGFYEKHGVKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKG SETQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPML MAEQLDHMGGDQLRRKIESMGVKVHTSKNTKEIVQEGTEARKTMRFADGSELEVDFIVFS TGIRPRDKLATQCGLAVAQRGGIMINDTCQTSDPDIYAIGECASWNNRVYGLVAPGYKMA QVAVDHILGSENAFTGADMSAKLKLLGVDVGGIGDAHGRTPNSRSYVYLDESKEVYKRLI VSQDNKTLLGAVLVGDTSDFGNLLQLVLNAIELPENPDALILPAHASSGKPSIGVDKLPD SAQICSCFDVTKGMLISAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE VNNNLCEHFAYSRQELYHLIRVEGIKSFDELLEKHGQGYGCEVCKPTVGSLLASCWNEYV LKPEHTPLQDTNDNFLANIQKDGTYSVIPRSAGGEITPEGLVAVGRIAREFNLYTKITGS QRIGLFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVE LENRYKGIRTPHKMKFGVSGCTRECAEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL AADLDHDTLIKYLDRFMMFYIRTADKLTRTASWLDNLEGGIDYLKSVIIDDKLGLNEQLE SEMARLREAVICEWTETVNTPAAQTRFKHFINSTQRDPNVQVVPEREQHRPATPYERIPV MLVEENA >gi|333596725|gb|GL892087.1| GENE 1881 2053719 - 2054045 419 108 aa, chain + ## HITS:1 COG:STM3475 KEGG:ns NR:ns ## COG: STM3475 COG2146 # Protein_GI_number: 16766763 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Salmonella typhimurium LT2 # 1 108 1 108 108 194 84.0 4e-50 MSQWVNICNINDILPATGVCALLGNEQVAIFRPRHDEQVFAISNIDPFFEASVLSRGLIA EHQGELWVASPLKKQRFRLTDGRCMEDESVSVKHYDVRVKDGEVQLKA >gi|333596725|gb|GL892087.1| GENE 1882 2054180 - 2055553 1505 457 aa, chain + ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 457 1 247 247 472 91.0 1e-133 MDHLPIFCQLRNRDCLLVGGGDVAERKARLLLEAGARLTVNALTFAPQFDVWAQEGMLTQ VQGEFDESLLDTCWLTIAATDNDDVNQRVSDACEARRIFCNVVDAPKEASFIMPSIIDRS PLMIAVSSGGRSPVLARLLREKLEAVLPQHLGQIAHYAGQLRSRVKQTFSTVGERRRFWE KFFVNDRLAQSLANQDAKAVEETTEQLLSEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQ QADIVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLK GGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHL KTGSELDWHNLAAEKQTLVFYMGLNQAATIQAKLLEHGMEADMPVALVENGTAITQRVVD GVLTQLGELAQQVESPALIVVGRVVALREKLNWFSSH >gi|333596725|gb|GL892087.1| GENE 1883 2055697 - 2055867 117 56 aa, chain + ## HITS:1 COG:no KEGG:ECL_04745 NR:ns ## KEGG: ECL_04745 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 56 1 56 56 101 98.0 1e-20 MFKLAKAAVLVGMLSTLTACTGHVQNTKNNCSYDYLLHPAISISKIIGGCGPAAQQ >gi|333596725|gb|GL892087.1| GENE 1884 2055964 - 2056968 1502 334 aa, chain - ## HITS:1 COG:ECs4226 KEGG:ns NR:ns ## COG: ECs4226 COG0180 # Protein_GI_number: 15833480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 654 94.0 0 MTKPIVFSGAQPSGELTIGNYMGALRQWVSMQDDYHCIYCIVDLHAITARQDPEKLRKAT LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYSEN INAGLFDYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIAQRFNALYGDVFKVPEPFIP KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKLKRAVTDSDEPPVVRYDVQNK AGVSNLLDILSGVTGQSIPELEKHFEGKMYGHLKGEVADAVSGMLTELQERYHRYRNDEA FLQKVMKEGAEKASARASETLKAVYDAIGFVGKP >gi|333596725|gb|GL892087.1| GENE 1885 2056961 - 2057722 903 253 aa, chain - ## HITS:1 COG:STM3482 KEGG:ns NR:ns ## COG: STM3482 COG0546 # Protein_GI_number: 16766770 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Salmonella typhimurium LT2 # 1 253 1 252 252 404 79.0 1e-113 MDKLQAIRGVAFDLDGTLVDSAPGLTRAVDQALYALELPVAGEERVVTWIGNGADVLMER ALTWARQERASQRSAQGKPSVDHADIPKDEQQRILRKLFDRFYEETVEEGSFLFPDVAET LGALHAKGIPLGLVTNKPTPFVAPLLEALDIAKYFSVIVGGDDVQNKKPHPEPLLLVAGK LSLAPAELLFVGDSRNDILAARAAGCPSVGLTYGYNYGEAITLSEPDVVFDHFKDLLPAL GLSHSEHQELNND >gi|333596725|gb|GL892087.1| GENE 1886 2057715 - 2058392 1047 225 aa, chain - ## HITS:1 COG:ECs4228 KEGG:ns NR:ns ## COG: ECs4228 COG0036 # Protein_GI_number: 15833482 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli O157:H7 # 1 224 1 224 225 432 97.0 1e-121 MKQFLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYG ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGV KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRRELAKVNHG >gi|333596725|gb|GL892087.1| GENE 1887 2058432 - 2059244 911 270 aa, chain - ## HITS:1 COG:STM3484 KEGG:ns NR:ns ## COG: STM3484 COG0338 # Protein_GI_number: 16766772 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 1 270 1 270 278 453 83.0 1e-127 MKKNRAFLKWAGGKYPLLDDIKKHLPKGECLIEPFVGAGSVFLNTDFSRYILADINSDLI SLYNIVKLRTDEYVEEARKLFTPENNNPDVYYQFRAEFNQSQDPFRRALLFLYLNRHGYN GLCRYNLRGEFNVPFGRYKRPYFPLDELYHFAEKAQNAEFYCLSYEECMELAGVNSVVYC DPPYAPLSATANFTAYHTNSFSPAEQARLAEMAEKLVSKRIPVLISNHDTPDTREWYKAA KHFQVKVRRSISSNGGTRKKVDELLALYRP >gi|333596725|gb|GL892087.1| GENE 1888 2059312 - 2060601 1095 429 aa, chain - ## HITS:1 COG:STM3485 KEGG:ns NR:ns ## COG: STM3485 COG3266 # Protein_GI_number: 16766773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 429 1 425 425 313 67.0 5e-85 MDEFKPEDELKPDPSDRRTGRSRQSSERDNEPQINFDDVDLDADDRRPSRSRNVRNERED EEYESEEELMDEQPVERRPRKRKKAVAAKPASRQYIMMGLGVLVLVLLIVGIGSALKAPS TNSTEQTASAEKSIDLSGNDASNQANGAQPAPGTTSAEQTAGNTSAGQDISLPPVSATPT QGQAPVTPEGQQRVEVQGDLNNALMQPQNQEQVNAAVVNSTLPTEPATVAPVHGSNAQQQ TAATETKPRQTQTAPRQERKQAVIEPKRETKPQTVAKAPETKAPAQTKPAVSQPVKAPTP AATTAPKATATTTAPAATTPAAPAAKTGAASGKTTGNVGSLQSASSSNYTLQLSSSSNYD NLNAWAKKSNLKNYVVYQTTRNGQPWYVLVSGIYASKDEAKRAVSTLPADVQAKNPWAKP IHQVQADLK >gi|333596725|gb|GL892087.1| GENE 1889 2060694 - 2061782 931 362 aa, chain - ## HITS:1 COG:STM3486 KEGG:ns NR:ns ## COG: STM3486 COG0337 # Protein_GI_number: 16766774 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Salmonella typhimurium LT2 # 1 362 1 362 362 652 90.0 0 MERITVTLGERSYPITIAAGLFNDPASFLPLKAGDQAMLVTNETLAPLYLDRVRHLLEQA GVKVDSVILPDGEQYKSLTVLDTVFTALLQKPHGRDTTLLALGGGVVGDLTGFAAASYQR GVRFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPARELAS GLAEVIKYGIILDGEFFTWLEENMDALLRLDGQAMAYCIRRCCELKAEVVAADERETGLR ALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARASERLGQFRPEETARIIALLKRA GLPVSGPQEMSAQAYLPHMMRDKKVLAGEMRLVLPLAIGKSEVRGGVPHEVVLGAIADCQ QA >gi|333596725|gb|GL892087.1| GENE 1890 2061840 - 2062361 504 173 aa, chain - ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 173 68 240 240 313 98.0 7e-86 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDVEGEEGFR DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLQVETPPREVLEALADERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|333596725|gb|GL892087.1| GENE 1891 2062648 - 2063946 1293 432 aa, chain - ## HITS:1 COG:ECs4233 KEGG:ns NR:ns ## COG: ECs4233 COG4796 # Protein_GI_number: 15833487 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Escherichia coli O157:H7 # 25 430 5 410 412 566 75.0 1e-161 MSARCASRSNGHGNEKERKKVKIRIGLLLAVLSQPLWAATPKPVTLLVDDVPVVQVLQAL VAQEDRNLVVSPDVSGSLSLNLTRVPWRQALQTVVNSAGLVLREEGGIFYVHTAAWLREQ QARKAQEQAQRLLDAPLHSHSIPFAYADAAELQKAAEKLLSPKGSLSVDKRTNRLLVRDN QTVVAMLQRWAAQMDLPIEQVELAAQIVTISEKSLRELGVKWNLADATKAGKVGQVSTLG ADLSVASATTHVGFNIGRINGRMLDLELSALEQKQQVDIIASPRLLASHMQPASIKQGSE IPYQVSSGESGATSVEFKEAVLGMEVTPVVLPGGRVRLKLHISENMPGQVLQQADGETLA IDKQEIETQVEVKSGETLPLGGIFSQKNKTGRDSVPVLGNIPWLGQLFRHDGKDNERREL VVFITPRLVSIH >gi|333596725|gb|GL892087.1| GENE 1892 2064192 - 2064653 185 153 aa, chain - ## HITS:1 COG:no KEGG:Ent638_3806 NR:ns ## KEGG: Ent638_3806 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 152 1 152 153 90 36.0 2e-17 MDIWYQRWSDARPSRRVLCWFIASGFVAFVIWGLLLRPAALRYADIQAQTISAKRINASL WPQARRRPVMTQVKPSQPAQPFSPLAFQREEARLVHWKPQQNGGELALDASWGAVPALFS RLALENMRVSAFDITPQGKRLRLSLQLEIGHAQ >gi|333596725|gb|GL892087.1| GENE 1893 2064657 - 2065148 389 163 aa, chain - ## HITS:1 COG:ECs4236 KEGG:ns NR:ns ## COG: ECs4236 COG3166 # Protein_GI_number: 15833490 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Escherichia coli O157:H7 # 5 159 6 169 179 78 34.0 5e-15 MSMPNLLPWRRQQRIQHLRFWGLLFAASLLVMLAGGVSLRVTKTLALQSLQSELAGMRAV QKVLKARQPQSAGLKTPSLPSDPAWQPALESLADAMPRQAWLTALRYQPPSLILTGYTTS LPALSAMTDALKRVTGFTPGPAGELQQDSQGRWMFSFQLHSRR >gi|333596725|gb|GL892087.1| GENE 1894 2065148 - 2065921 459 257 aa, chain - ## HITS:1 COG:no KEGG:ECL_04758 NR:ns ## KEGG: ECL_04758 # Name: not_defined # Def: pilus assembly protein HofM # Organism: E.cloacae # Pathway: not_defined # 1 257 1 257 258 372 75.0 1e-102 MAFKTWQTGVHIQQDKVVAVALTRERAGWRLRRWWAVPLSDAIIREGKIVNPEQLVNALR GWRKTLPHSHRVFLSFPSTRVLQRALPRPSVTLRDSEQLTWVGATLARELEMPADTLCFD YAQDTFSNTFQVTAAQNREVDTLLSLAKALHLRLAAIAPDAGALANLLSAVAPTRCVAWR DEHQWLWAMRHQWGRRDTTEAANVNALAALLALSPSDIAVFDAARDPWEVVKLCQPPLPE CGADYTVALALAMSEVP >gi|333596725|gb|GL892087.1| GENE 1895 2066183 - 2068594 2742 803 aa, chain + ## HITS:1 COG:ECs4238 KEGG:ns NR:ns ## COG: ECs4238 COG5009 # Protein_GI_number: 15833492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Escherichia coli O157:H7 # 1 803 56 858 858 1489 90.0 0 MQVYSADGELMAQYGEKRRIPLTLNQIPPVMVKAFIATEDSRFYEHHGVDPVGIFRAASV ALFSGHASQGASTITQQLARNFFLSPEKTLMRKIKEVFLAIRIEQLLSKDEILELYLNKI YLGYRAYGVGAAAQVYFGKPIDQLTLSEMATIAGLPKAPSTFNPLYSLDRATARRNVVLS RMLSEGYISQAEYDKARSDVIDANYHAPEIAFSAPYLTEMVRQEMVSRYGDKAYEDGYRV YTTVTRKVQQAAQQAVRNNVMDYDMRHGYRGPSNVLWKVGEGAWDSKKITDSLKALPTYG PLRPAVVTQADPQEAVAMMADGTSVSLRMEGVRWARPYRSDTLQGPTPRKVTDVVQTGQQ IWVRQVGDAWWLAQVPDVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNI KPFLYTAAMDKGLTLASILNDVPISRWDAGAGSDWQPKNSPAQYAGPIRLRQGLGQSKNV VMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPLQVARGYSVMANGGFLV DPYFISKIENDQGGVLFEAKPKIACPECDIPVIYGDTPKSNVLENKDMEDVAISQERQNL AVPQPQLEQANQALVAQSGAQEYAPHVISTPLSFLIKSALNTNIFGEPGWQGTGWRAGRD LQRHDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDLGRTTASGAIKDQISGYE GGAKSAQPAWDAYMKAVLEGVPEQPLTPPPGVVTVNIDRSTGQLANGGNSRAEYFIEGTQ PTTQAVHEVGTEIIDNGETHELF >gi|333596725|gb|GL892087.1| GENE 1896 2068688 - 2069248 746 186 aa, chain - ## HITS:1 COG:STM3494 KEGG:ns NR:ns ## COG: STM3494 COG0494 # Protein_GI_number: 16766782 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 186 12 197 198 341 95.0 5e-94 MTKPLQKPTILNVETVAKSRLFNVESVDLEFSNGVRRVYERMRPSSREAVMIVPIVDEHL ILIREYAVGTESYELGFSKGLIDPGETVFEAANRELKEEVGFGAKELTFLKKLSMAPSYF SSKMNIVVAEDLYPESLEGDEPEPLPQVRWPLAHLMDLLEDPDFNEARNVSALFLVREWL KGQGRL >gi|333596725|gb|GL892087.1| GENE 1897 2069576 - 2071714 2158 712 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3811 NR:ns ## KEGG: Ent638_3811 # Name: not_defined # Def: intracellular growth attenuator IgaA # Organism: Enterobacter_638 # Pathway: not_defined # 1 712 1 712 712 1292 86.0 0 MSTILIFLAAVLACASIAVWVFRRRVHRRYRLPFLNAFAGANTRKLSPEERCTVEQYLDT LNRSRLSPGPTGASAAPVSLNLNAQSDTVLCVTRSITRYGITTDDPNKWRYYLDSVEVHL PPFWEQYINDENSVELIHTDTLPLVISLNGHTLSEYVQEAPRFALERASGTQASIRGEET EQIELLNIRQETHEEYVLSRPDGIREAVLIVVSFLLFFICLLTPDVFVPWLAGGAVLLLA AGLWGIFAPPAKTSLREIHCLRGTPKRWGLFGENDQEHINNISLGIIDLIYPRHWQPWIA QDLGHKTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSAVIAGGAALIFVMLLLFVP LDMPIKFTLSWIKGAQTVEATSVQQLEEAGVRVGDTLRLKGTGMCNIHTPGAWNTRQNSP FSPFDCSQIIWNDASPLPLPESDVVNKATALTQTINRQLHPKPDDDSRVSPALRSAIQKS GMVLLDDFGEIVLKTEDLCSAQDDCIRLKNALVNLGNSKDWDALVKRAEAGRLDGVNVLL RPVSAESLDNLVATSTAPFVMRETTRAAQALNSPAPGGFVIASDEGSDLVDQPYPQVSLY DYPAQEQWSEFQRLAQMLMQTPFSAEGIVTTLFTDANGTRHIGLHRMPDSAGLWRYVGTS LLLIAMLACIVWNGYQAVRRYQRSRTRLAEIQAYYENCLNPKLISSSESLIG >gi|333596725|gb|GL892087.1| GENE 1898 2071779 - 2072462 642 227 aa, chain + ## HITS:1 COG:STM3496 KEGG:ns NR:ns ## COG: STM3496 COG1011 # Protein_GI_number: 16766784 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 1 221 1 221 222 415 89.0 1e-116 MHLDIDWQAVDTVLLDMDGTLLDLAFDNYFWQKLVPETYGEQQGISPAEAQEFIRSQYSA VQHTLNWYCLDYWSERLGLDICAMTTAQGARAVLRDDTVPFLDALKACGKRRILLTNAHP HNLAVKLEHTGLASHLDLLLSTHTFGYPKEDQRLWHAVVEETGLQPERTLFIDDSEPILD SAAAFGIRYCLGVTNPDSGLAEKSYLRHPGLNDYRRMIPSLTVKETP >gi|333596725|gb|GL892087.1| GENE 1899 2072459 - 2072860 343 133 aa, chain + ## HITS:1 COG:ECs4242 KEGG:ns NR:ns ## COG: ECs4242 COG1188 # Protein_GI_number: 15833496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 199 87.0 1e-51 MKEKPSDGVRLDKWLWAARFYKTRALAREMVDGGKVHYNGQRSKPSKLVELNATLTLRQG NDEKTVVVKAITEQRRPATEAVLLYEETAESIEKREKTALARKMNALTMPHPDRRPDKKE RRDLMKFKHGENE >gi|333596725|gb|GL892087.1| GENE 1900 2072885 - 2073763 1123 292 aa, chain + ## HITS:1 COG:STM3498 KEGG:ns NR:ns ## COG: STM3498 COG1281 # Protein_GI_number: 16766786 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Salmonella typhimurium LT2 # 1 292 3 294 294 538 89.0 1e-153 MAQHDQLHRYLFEQFAVRGELVTVSETWKQILENHNYPLPVKTLLGELLVATSLLTATLK FAGDITVQLQGDGPMSLAVINGNNQQQMRGVARVQGDIPENADLKTLVGNGYLVITISPE EGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGEVDGQPAAGGMLLQVLPAQDA QTNDFEHLATLTETIKAEELFTLSATDVLWRLYHEEEVTVYDPQAVEFKCTCSRERCAGA LKTLPDEEIDSIMAEDGEIDMHCDYCGTHYVFNSMDIAEIRNNASPADPQVH >gi|333596725|gb|GL892087.1| GENE 1901 2074154 - 2075773 2173 539 aa, chain + ## HITS:1 COG:STM3500 KEGG:ns NR:ns ## COG: STM3500 COG1866 # Protein_GI_number: 16766788 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Salmonella typhimurium LT2 # 1 539 1 538 538 1056 92.0 0 MRVNGLTPQDLKAYGIHDVQEVVYNPDYDTLYQEELNPALEGYERGVLTNLGAIAVDTGI FTGRSPKDKYIVRDDTTRDTLWWADKGKGKNDNKPLSPETWQHLKGLVTHQLSGKRLFII DAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPTDEELQDFTPDFIVMNGAKCTNPQWK EQGLNSENFIAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLRGIASMHCSANVGEKG DVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIRLSEEAEPDIF HAIRRDALLENVTVRADGSIDFDDASKTENTRVSYPIYHIENIVKPVSKAGHATKVIFLT ADAFGVLPPVSRLTASQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQY AEVLVKRMQASGAQAYLVNTGWNGTGKRISIKDTRSIIDAILDGSLDNAETFTLPMFDLA IPTELPGVDTRILDPRNTYGSPEQWREKAESLAKLFIENFEKYTDTPAGAALVSAGPKL >gi|333596725|gb|GL892087.1| GENE 1902 2075863 - 2077200 1553 445 aa, chain - ## HITS:1 COG:STM3501 KEGG:ns NR:ns ## COG: STM3501 COG0642 # Protein_GI_number: 16766789 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 445 4 450 450 855 95.0 0 MRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQ LEDGTQLVVPPAFRREIYRELGISLYSNEAAEDAGLRWAQHYEFLSQQMAQQLGGPTEVR VEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQN RPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSH DLRTPLTRIRLATEMMGEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMADLNA VLGEVVAAESGYEREIATDLQAGEIQVRMHPLSIKRAVANMVVNAARYGNGWIKVSSGTE LNRAWFQVEDDGPGIKPEQRKHLFQPFVRGDSARSTSGTGLGLAIVQRIVDNHNGLLEIG TSERGGLSIRAWLPVPVLRGQVKES >gi|333596725|gb|GL892087.1| GENE 1903 2077206 - 2077925 1038 239 aa, chain - ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|333596725|gb|GL892087.1| GENE 1904 2078154 - 2078627 628 157 aa, chain + ## HITS:1 COG:greBm KEGG:ns NR:ns ## COG: greBm COG0782 # Protein_GI_number: 16132230 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli K12 # 1 157 1 157 158 285 94.0 2e-77 MKTPLITREGYEKLKKEMDYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGQTLRFRIVGYDEIFGRKDYISI DSPMARALLKKEVGDLAVVQTPAGEASWYVNEIEYVK >gi|333596725|gb|GL892087.1| GENE 1905 2078715 - 2081045 1627 776 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 747 1 745 764 631 48 1e-179 MMKESLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRL GYLRELEDRRQAILKSIGEQGKLTSELESAINGTLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWNEPSHDPETEAARFIDADKGVADTKAALDGARYILMERFAEDAALLAKV RDYLWKNAHIVSTVVSGKEDEGAKFRDYFDHHEPISTAPSHRALAMFRGRNEGVLQLSLN ADPQFDEPPKESHCEQIIIDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPH TGQAAKAAVIVAALCEKYNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVN RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATRQALKDLMGDSSALRNL KAVDFTDEQFGVPTVTDIIKELEKPGRDPRPEFKTATFADGVETMNDLLPGMVLEGAVTN VTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGDTNARRGGNGGGREQQRPAAKAAKPRGRDAQPAGNSAMMDALAAAMGKKR >gi|333596725|gb|GL892087.1| GENE 1906 2081396 - 2081623 201 75 aa, chain + ## HITS:1 COG:STM3505 KEGG:ns NR:ns ## COG: STM3505 COG1918 # Protein_GI_number: 16766793 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Salmonella typhimurium LT2 # 1 74 1 74 75 132 90.0 1e-31 MQFTPDSAWKIIGFTREISPAYRQKLLSLGMLPGSSFQVVRVAPLGDPIHIETRRVNLVL RKKDLALIEVESLSR >gi|333596725|gb|GL892087.1| GENE 1907 2081654 - 2083972 2999 772 aa, chain + ## HITS:1 COG:STM3506 KEGG:ns NR:ns ## COG: STM3506 COG0370 # Protein_GI_number: 16766794 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Salmonella typhimurium LT2 # 1 772 1 772 772 1357 89.0 0 MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFTTTDNQVTLVDLPGT YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN MLDIAEKQKLRIDVDALSARLGCPVVPLVSTRARGIDALKLAIDRHTGNADIELVHYAQP LLREARQLAQEMDNSMPARQRLWLGLQMLEGDIYSRAYAGDAADKLDVAQARLSDELDDP ALHIADARYQAIAAICDVVSNALTAEPSRFTAAVDKIVLNRFLGLPIFLLVMYVMFLLAI NIGGALQPIFDGGSVAIFVHGIQWLGYTLHFPEWLTIFLAQGIGGGINTVLPLVPQIGMM YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER LMTIMMAPFMSCGARLAIFAVFAAAFFGQEGALAVFSLYVLGIVMAILTGLMLKHTIMRG EASPFVMELPVYHVPHLKSLIIQTWQRLKGFVLRAGKVIVVVSIFLSALNSFTLSGQAAD NINDSALASVSRVITPVFKPIGVQEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQEE EFNPAAFHLGDELLGAVEETWQSLKDTFSLSVLANPIEASKGDGEMATGAMGVMGQKFGS ASAAYSYLIFVLLYIPCISVMGAIARESSRGWMGFSILWGLNIAYSLATVFYQAVNYSQH PRYSLVCILAVILFNVMVIGLLRRARSRVNVNLLATRKTPTTCCSSPAGDCH >gi|333596725|gb|GL892087.1| GENE 1908 2083985 - 2084221 336 78 aa, chain + ## HITS:1 COG:no KEGG:ECL_04775 NR:ns ## KEGG: ECL_04775 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 78 1 78 79 135 96.0 4e-31 MASLIQVRDLLALQGRMEAKQLSLSLHTPQPMIDAMLERLEAMGKAVRIQEEPDGCLSGS CKRCPEGKACLREWWTLR >gi|333596725|gb|GL892087.1| GENE 1909 2084196 - 2084978 705 260 aa, chain - ## HITS:1 COG:bioH KEGG:ns NR:ns ## COG: bioH COG0596 # Protein_GI_number: 16131288 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 249 1 249 256 418 80.0 1e-117 MKTLWWQTVGTGNCHLVLLHGWGLNAEVWRCISEELASQFTLHLVDLPGYGRSHGYGAMT LNDMAEQVLEAAPQKAVWLGWSLGGLVASQIALRHPERVQALITVASSPCFSAREAWPGI KPEVLAGFQHQLSEDFQRTVERFLALQTMGTETARQDARTLKQTVLSLPMPEVEVLNGGL EILKMVDLREPLASLTVPHLRVYGYLDGLVPRKVVPLLDALWPESKSLVVAKAAHAPFIS HPAEFCSALSGFISEASTTP >gi|333596725|gb|GL892087.1| GENE 1910 2085015 - 2085695 140 226 aa, chain + ## HITS:1 COG:STM3510 KEGG:ns NR:ns ## COG: STM3510 COG1040 # Protein_GI_number: 16766798 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Salmonella typhimurium LT2 # 1 226 1 227 227 283 69.0 2e-76 MLTVPGLCWLCRMPLTLSAWGICSVCTRALGDLKGCPQCGLPAVSQTLPCGRCLKKAPPW SALVAVDDYVLPLSRLVHQFKFSSQTALAQPLARLLLLAVLQARRTRGLPQVDTLVNVPL FQRRHWRRGYNQSDLLCRPLAHWLGCRYPASALKRIHATAVQHRLNARSRKRNLKNAFRL ELPVNGLHIAIVDDVVTTGSTVAELSRLLLQSGAASVQVWCLCRTL >gi|333596725|gb|GL892087.1| GENE 1911 2085757 - 2086332 726 191 aa, chain + ## HITS:1 COG:yhgI_2 KEGG:ns NR:ns ## COG: yhgI_2 COG0694 # Protein_GI_number: 16131290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Escherichia coli K12 # 97 191 1 95 95 191 96.0 7e-49 MIRISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFEQ LTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQIN PQLAGHGGRVSLMEITEDGLAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDL TEHQRGEHSYY >gi|333596725|gb|GL892087.1| GENE 1912 2086698 - 2088014 1811 438 aa, chain + ## HITS:1 COG:STM3512 KEGG:ns NR:ns ## COG: STM3512 COG2610 # Protein_GI_number: 16766800 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 670 96.0 0 MPLVIVAIGVVLLLLLMIRFKMNGFIALVLVALAVGLMQGMPLVKVISSIKAGVGGTLGS LALIMGFGAMLGKMLADCGGAQRIATTLIEKFGKKNIQWAVVLTGFTVGFALFYEVGFVL MLPLVFTIAAAANIPLLFVGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLFGTI LAIPTVILAGPIYARFLKGIDKPIPEGLYSAKTFTEEEMPGFGVSVWTSLVPVILMAMRA IAEMVLPKGHAFLSVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLTSSIKIIA MMLLIIGGGGAFKQVLVDSGVDKYIAAMMHETNVSPLLMAWSIAAVLRIALGSATVAAIT AGGIVAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSALE TIISVCGLVGVLLLNMVV >gi|333596725|gb|GL892087.1| GENE 1913 2088103 - 2090184 2459 693 aa, chain - ## HITS:1 COG:malQ KEGG:ns NR:ns ## COG: malQ COG1640 # Protein_GI_number: 16131292 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Escherichia coli K12 # 1 683 1 684 694 1246 86.0 0 MESKRLDSAAQAAGISLSYINAHGKPQSIGADTKRRLLDAMHKTDAKASVAPVPNVKVFT AGKKMSLAVEGRGEFSWLLTTEEGHQHKGHATGGKTFTLPAKLPEGYHSLTLTQDEQRFH CRVIVAPKRCYEPQALLEGKKLWGACVQLYTLRSDSNWGIGDFGDLKKMLASVGERGGAF IGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNALDDFKNSKEAQAWWKLETTQQML KQARDADWVDYASVTALKMAALRLAWKGFAKRDDEQMAAFRQFVMQEGESLYWQAAFDAL HAYQVQEDEMRWGWPVWPEAYQSVDTPEVKAFCKTHADEVDFYLWLQWLAYSQFAACWQV SQGYKMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDPH VMAARAYEPFIDLLRANMQNCGALRIDHVMSVLRLWWIPYGETADHGAYVQYPVDDLLSI LALESKRHQCMVIGEDLGTVPVEIVSKLRDSGVYSYKVLYFENDHEKTFRAPKAYPEQSM AVATTHDLPTLRGYWESGDLTLGKTLGLYPDEEVLRGLYQDRELAKQGLLDALHKHGCLP KRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWIDMAEPVNIPGTSYQYKNWRR KLSTTLEAMFADDGVNRLIKDLDKRRRAVGKKP >gi|333596725|gb|GL892087.1| GENE 1914 2090194 - 2092587 3397 797 aa, chain - ## HITS:1 COG:STM3514 KEGG:ns NR:ns ## COG: STM3514 COG0058 # Protein_GI_number: 16766802 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Salmonella typhimurium LT2 # 1 797 1 797 797 1514 90.0 0 MSQPTFNKAQFQAALTRQWQRFGLHAANEMTPHQWWQAVSGALAEQLDAQPVAKPVKGQR HVNYISMEFLIGRLTGNNLLNLGWYQDVGDVLKEHDINLTDLLEEEIDPALGNGGLGRLA ACFLDSMATVGQSAIGYGLNYQYGLFRQSFADGHQMEAPDDWHRNTYPWFRHNAQLDVQV GIGGKVTKQGLWEPAFTLTGEAWDLPVLGYRNGVAQPLRLWQAKHAHPFNLTKFNDGDFL RAEQQGIDAEKLTKVLYPNDNHLAGKKLRLMQQYFQCACSVADILRRHHLAGRTLAQLPD FEVIQLNDTHPTIAIPELLRVLIDEHQLSWDDAWAITSRTFAYTNHTLMPEALECWDEKL VKTLLPRHMQIINKINDQFKTLVEKTWPGDKAVWAKLAVVHNKQVRMANMCVVSGFAVNG VAALHSDLVVKDLFPEYHQLWPTKFHNVTNGITPRRWIKQCNPLLAGLLDKTLKKEWAND LDQLINLEKQADDAKFREQYRAIKLENKVRLAEFVKVRTGIEINPNAIFDIQIKRLHEYK RQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIILAINKVAAAINNDP KVGDKLKVVFLPDYCVSAAEMLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG ANVEIAEKVGEENIFIFGHTVEEVKAIKAKGYDPVKWRKKDKVLDAVLKELESGKYSDGD KHAFDQMLHSMDKQGGDPYLVMADFTAYVEAQKQVDVLYRDQDAWTRACILNTARCGMFS SDRSIRDYQARIWQAKR >gi|333596725|gb|GL892087.1| GENE 1915 2093159 - 2095864 3186 901 aa, chain + ## HITS:1 COG:STM3515 KEGG:ns NR:ns ## COG: STM3515 COG2909 # Protein_GI_number: 16766803 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 901 1 901 901 1526 90.0 0 MLIPSKLSRPVRLDHTVVRERLLAKLSGAHNFRLALVTSPAGYGKTTLISQWAAGKSDLG WYSLDEGDNQQERFASYLIAAIQQATNGHCVTSEVMVQKRQYASLSSLFSQLFIELAEWH RPLYVVIDDYHLITNPVIHESMRFFLRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIG SQQLAFTHQEAKQFFDCRLTSPIEASESSRLCDDVAGWATALQLIALSARQNNSPTHQSA RRLAGINASHLSDYLVDEVLDSVDLSTRHFLLKSSLLRSMNDALIVRVTGIENGQLQLEE IERQGLFLTRMDDHGEWFSYHPLFGSFLRQRCQWELAAELPDIHRAAAESWMAQGFPSEA IHHALAAGDASMLRDILLNHAWGLFNHSELTLLEESLKALPWESLLENPRLVLLQAWLMQ SQHRYSEVNTLLARAEQEMESEMDTTLHGEFNALRAQVAINDGDPDEAERLAMVALDELP LANFYSRIVATSVHGEVLHCKGDLTRSLSLMQQTEQMARRHDVWHYALWSLIQQSEILFA QGFLQAAWENQEKAFQLIREQHLEQLPMHEFLLRIRAQLLWAWSRLDEAESCARQGLNVL SSFQPQQQLQCLALLVQCSLARGDLDNARNHLNRLENLLGNGQYHSDWVSNADKVRVIYW QMTGDKKSAANWLRHTPKPEFANNHFLQSQWRNIARVQILLGDFEPAEIVLEELNENARS LRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLLEALQLANRTGFISHFVIEGEVMAQQLRQ LIQLNTLPELDQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE WQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG V >gi|333596725|gb|GL892087.1| GENE 1916 2095927 - 2096685 1018 252 aa, chain - ## HITS:1 COG:STM3523 KEGG:ns NR:ns ## COG: STM3523 COG1349 # Protein_GI_number: 16766810 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 252 1 252 252 453 90.0 1e-127 MKQTQRHDAIIELVKKQGYVSTEELVEQFAVSPQTIRRDLNDLADQNRILRHHGGAALPS SSVNTSWHDRKATQTAEKERIARKVASQIPNGATLFIDIGTTPEAVAHALLNHENLRVVT NNLNVANTLMQKDDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDTDGS LLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDALYTDVMPPAGVMQ VIKDNNLQLELC >gi|333596725|gb|GL892087.1| GENE 1917 2096702 - 2097532 853 276 aa, chain - ## HITS:1 COG:ECs4267 KEGG:ns NR:ns ## COG: ECs4267 COG0705 # Protein_GI_number: 15833521 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Escherichia coli O157:H7 # 1 275 1 275 276 453 82.0 1e-127 MLMITSFSNPRVAQAFVDYMATQGIILTIQQHTQTDVWLADETQASRVNAELARFLENPG DPRYLAASWQSGQTDSGLHYQRFPFLATLRERAGPFTLLLMAACIIVFIIMSVVGDQSVM IALAWPYDPSLQFDVWRYFTHALMHFSVMHILFNLLWWWYLGGIVEKRLGSGKLIVITLI SALLSGYVQHKFSGPWFGGLSGVVYALMGYAWLRGERDPESGIYLQRGLITFALIWLIAG WFDLFGMSIANGAHVTGLAVGLAMALADTLHARKRT >gi|333596725|gb|GL892087.1| GENE 1918 2097580 - 2097912 455 110 aa, chain - ## HITS:1 COG:glpE KEGG:ns NR:ns ## COG: glpE COG0607 # Protein_GI_number: 16131299 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 107 1 107 108 182 82.0 1e-46 MDQFECINVEEAHQKMHQGTAVLVDIRDPQSFAMGHTPGAFHLTNDSLGAFMRDNDFDTP VMVMCYHGNSSKGAAQYLLQQGYEAVYSVDGGFDAWHRHFPAEVEYAFER >gi|333596725|gb|GL892087.1| GENE 1919 2098101 - 2099609 2052 502 aa, chain + ## HITS:1 COG:ECs4269 KEGG:ns NR:ns ## COG: ECs4269 COG0578 # Protein_GI_number: 15833523 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 502 1 501 501 883 87.0 0 METKDLIVIGGGINGAGIAVDAAGRGLSVLMLEANDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLNMAPHLAIPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS TGLRFGSESVLKPEIVRGFEYSDCWVDDARLVLANAQMVEKKGGEVKTRTRATAARRENG LWIVEAEDVDTGEKFSWKARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVH TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKNVEIDESEVSYLLKVYNAHF KKQLARDDVVWTYSGVRPLCDDESDSPQAITRDYTLDIHDVDGQAPLLSVFGGKLTTYRK LAEHALEKLAPYYKGIGPAWTKGAVLPGGDIGGNRDDYAAKLRRRFPFITEGMARHYART YGSNTELFLGGAKEIADLGEHFGHELYEAELRYLVAHEWVRRLDDAIWRRTKEGMWLNAE QQSRVAQWLAQHAGKRELSLAS >gi|333596725|gb|GL892087.1| GENE 1920 2099695 - 2102142 3333 815 aa, chain - ## HITS:1 COG:STM3534 KEGG:ns NR:ns ## COG: STM3534 COG0058 # Protein_GI_number: 16766820 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Salmonella typhimurium LT2 # 1 815 1 815 815 1543 92.0 0 MNAPFSYSSPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRMVERWLRS NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKNALEEMGLDLEELIDEENDPG LGNGGLGRLAACFLDSLATLALPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE FKRHNTRYKVRFGGRIQQEGKKSRWVETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATIQDILSR HYQLHKTYANLAEKTAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVTCQVFSYTNHT LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTGLLSRASIIDESNGRR VRMAWLAVVISHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANQP LSDVLDENIGRTWRTDLSQLSELEQHIDFPTVNKAVREAKLLNKKRLSVWLALHLNVVAN PKALFDVQIKRIHEYKRQLMNVLHVITHYNRIKADPTAEWVPRVKIFAGKAASAYYMAKH IIHLINDVAKVVNHDPDIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISTAGTEASGTSN MKFALNGALTIGTLDGANVEMLEHVGAENIFIFGNTAEEVEALRKQGYSPREYYEEDEEL RQVLTQIATGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRQPEKW TSAAMHNIANMGYFSSDRTIKEYAENIWHIDPVRL >gi|333596725|gb|GL892087.1| GENE 1921 2102161 - 2103594 1500 477 aa, chain - ## HITS:1 COG:ECs4274 KEGG:ns NR:ns ## COG: ECs4274 COG0297 # Protein_GI_number: 15833528 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Escherichia coli O157:H7 # 1 476 1 476 477 910 92.0 0 MQVLHVCSEMFPLLKTGGLADVLGALPAAQIAGGVDTRVLLPAFPDIRRGIPDAKVVTRR ETFAGRITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLYAYTDNVLRFALLGWVGAEM AVGLDPFWRPNVVHAHDWHAGLAPAYLAAKGHPAKSVFTVHNLAYQGMYYAHHMNDIDLP WSFFNMHGLEFNGQISFLKAGLYYADHITAVSPTYAREITQPEFGYGMEGLLQQRHREGR LSGILNGVDEQIWNPETDLLLAARYGRDSVEDKAENKRQLQIAMGLKVNDKVPLFAVVSR LTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFS HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASG FVFEDSNAWSLLRAIRRAFVLWSRPSLWRYVQRQAMSMDFGWHVAAQSYRDLYQRLM >gi|333596725|gb|GL892087.1| GENE 1922 2103594 - 2104889 1246 431 aa, chain - ## HITS:1 COG:STM3536 KEGG:ns NR:ns ## COG: STM3536 COG0448 # Protein_GI_number: 16766822 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Salmonella typhimurium LT2 # 1 431 1 431 431 856 93.0 0 MVRLEKNDPLMLARQLPLKTVALILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSN CLNSGIRRIGVITQYQSHTLVQHIQRGWSFFSEEMNEFVDLLPAQQRVHGENWYRGTADA VTQNLDIIRRYNAEYIVILAGDHIYKQDYSHMLIDHVEKGARCTVACLPVPVAEATAFGV MHVDGDDKIIDFVEKPANPPTMPGDDTKSLASMGIYVFDADYLYELLEEDDKDENSSHDF GKDIIPKITKAGMAYAHPFPLSCVQSDPNAEPYWRDVGTLEAYWKANLDLASVTPELDMY DQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFC NIDSAVLLPDVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE MLRKLQIKQER >gi|333596725|gb|GL892087.1| GENE 1923 2104907 - 2106880 1649 657 aa, chain - ## HITS:1 COG:glgX KEGG:ns NR:ns ## COG: glgX COG1523 # Protein_GI_number: 16131305 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Escherichia coli K12 # 1 657 1 657 657 1110 79.0 0 MTQLTAGKPEPLGASFDGKGVNFTLFSAHAERVELCVFDGEGNEHRYDLPARTGDTWHGY LAGGRPGMHYGFRVHGPWEPAQGHWFNPAKLLIDPCAHRVDGEFKDDPLFHVGYGEPDHR DSASVAPKSVVVHDLYDWEDDAPPQTPWGNTVIYEAHVKGLTYLHPSIPKEMRGTYKALG HSTMVAYLKHLGITALELLPVAHFASEPRLQRLGLSNYWGYNPLAMFALDPRYAVHPEKA RDEFRDAVKALHAAGIEVILDVVLNHSAESDLDGPTLSQRGIDNRSYYWIRDDGDYENWT GCGNTLNLSHPAVTHYAYECLKYWVETFHVDGFRFDLAPVMGRTPAFSQQAPLFEAIKNC PVLSRVKLIAEPWDIGEGGYQVGNFPPLFAEWNDHYRDAIRRFWLTRDLSLGEFAGRFAG SSDLFKRDGKRPSATINLVTAHDGFTLRDCVCFNQKHNEANGEENRDGTNDNHSFNHGIE GLGGSLDVIERRRASVHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNTLTWLDW GEANSGLTHFTAALIHLRQQIPALTADRWWEEGDGNVRWLNQDAQPLSAQEWQHGVPRLQ ILLSDTWLVTLNATDDVAEIVLPDGEWRAVPPFAGADNPVVMAVWHGPAHGVCVFQR >gi|333596725|gb|GL892087.1| GENE 1924 2106877 - 2109063 2920 728 aa, chain - ## HITS:1 COG:glgB KEGG:ns NR:ns ## COG: glgB COG0296 # Protein_GI_number: 16131306 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Escherichia coli K12 # 1 728 1 728 728 1408 91.0 0 MSDRISRDVINALIAGHFADPFSVLGMHRTEAGLEVRALLPDATEVWVIEPKTGRKVGNL ECLDSRGFFSGVMPRRKNPFRYQLAVIWHGQQNLIDDPYSFGPLLKEMDAWLLSEGTHLR PYETLGAHADTMDGITGTRFAVWAPNAQRVSVVGQFNYWDGRRHPMRLRRETGIWELFIP GAHNGQLYKFEMIDANGKLRIKSDPYAFEAELRPNTASLICGLPEKVVQSEERKQANRFD APISVYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGY QPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPSDDFALAEFDGTKLYEHS DPREGYHQDWNTLIYNYGRREVSNYLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG EWIPNEYGGRENLEAIEFLRNTNRIIGEQVEGAVTMAEESTDFPGVSRPPAMGGLGFWYK WNLGWMHDTLDYMKLDPVFRQYHHDKLTFGLLYNYTENFMLPLSHDEVVHGKKSILDRMP GDPWQKFANLRAYYGWMFAFPGKKLLFMGNEFAQGREWNHDTSLDWHLLEGADNWHHGVQ RLVRDLNLTYRHHKALHELDFDPYGFEWLVVDDHECSVFVFVRRDKAGNEIIVASNFTPV PREHYRFGINQPGKWREILNTDSMHYHGSNAGNGGLVQSDTLESHGRPNSLSLTLPPLST IWLVREGE >gi|333596725|gb|GL892087.1| GENE 1925 2109303 - 2110406 1656 367 aa, chain - ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 706 94.0 0 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAYDL EALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT DGLNNGVKTFVGGNCTVSLMLMSLGGLFAQDLVEWVSVATYQAASGGGARHMRELLTQMG QLHQSVATELADPASAILDIERKVTQLTRSGELPVDNFGVPLAGGLIPWIDKQLDNGQTR EEWKGQAETNKILATANTIPVDGLCVRIGALRCHSQAFTIKLKKDVSIPTVEELLAAHNP WAKVVPNDRDITMRELTPAAVTGTLTTPVGRLRKLNMGPEYLSAFTVGDQLLWGAAEPLR RMLRQLA >gi|333596725|gb|GL892087.1| GENE 1926 2110585 - 2111178 800 197 aa, chain + ## HITS:1 COG:ECs4279 KEGG:ns NR:ns ## COG: ECs4279 COG2095 # Protein_GI_number: 15833533 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 284 94.0 8e-77 MSEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMIRELLIALLVMFIFLFAGEK ILAFLNLRAETVSISGGIILFLIAIKMIFPSAEGSSSGLPAGEEPFIVPLAIPLVAGPTI LATLMLLSHQYPNQMSHLVIALLIAWGGTFIILLQSSLFLRLLGEKGVNALERLMGLILV MMATQMFLDGIRAWMKG >gi|333596725|gb|GL892087.1| GENE 1927 2111719 - 2112984 1799 421 aa, chain - ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 421 26 446 446 657 96.0 0 MHAFVALMVVSIGAGLFSGMPLDKIAATMEKGMGGTLGFLAIVVALGAMFGKILHETGAV DQIAVKMLKSFGHSRAHYAIGLAGLICALPLFFEVAVVLLISVAFSMARHTGTNLVKLVI PLFAGVAAAAAFLLPGPAPMLLASQMHADFGWMILIGLCAAIPGMIIAGPLWGNFISRYV ELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPVGSTAYEWFEFIGH PFTAILVACLVAIYGLAMRQGMPKDRVMEICGAALQPAGIILLVIGAGGVFKQVLVDSGV GPALGEALTGMGLPIAVTCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAA LSICIAGGSIVVSHVNDAGFWLFGKFTGATEAQTLKTWTLMETILGTTGAIVGMIAFTLL S >gi|333596725|gb|GL892087.1| GENE 1928 2113063 - 2113551 583 162 aa, chain - ## HITS:1 COG:STM3542 KEGG:ns NR:ns ## COG: STM3542 COG3265 # Protein_GI_number: 16766828 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Salmonella typhimurium LT2 # 1 160 14 173 177 303 93.0 7e-83 MGVSGSGKSAVASEVAHQLQAAFLDGDFLHPRSNIMKMASGEPLNDDDRKPWLQALNDAA FAMQRTNKVSLIVCSALKKTYRDLLRDGNPNLSFIYLKGDFEVIESRLKARKGHFFKTQM LVTQFEALQEPGEDEKDVLVVDIDQPLEGVVASTIEVINKRQ >gi|333596725|gb|GL892087.1| GENE 1929 2113717 - 2114712 1110 331 aa, chain - ## HITS:1 COG:ECs4287 KEGG:ns NR:ns ## COG: ECs4287 COG1609 # Protein_GI_number: 15833541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 635 96.0 0 MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN ATSRAVGVLLPSLTNQVFAEVLRGIESVTDAFGYQTMLAHYGYKPELEEERLESMLSWNI DGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAVGFDNFEAARQMTAAIIARGH RHVAYLGARLDERTIIKQKGYEQAMLDAGLTPYSVMVEQSSSYTSGIELMRQARREYPQL DGIFCTNDDLAVGAAFECQRLGLKIPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGRI GAERLLARIRGEAVTPKMLDLGFTLSPGGSI >gi|333596725|gb|GL892087.1| GENE 1930 2114804 - 2115499 993 231 aa, chain - ## HITS:1 COG:STM3544 KEGG:ns NR:ns ## COG: STM3544 COG1741 # Protein_GI_number: 16766830 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 446 92.0 1e-125 MIYLRKANERGHANHGWLDSWHSFSFADYYDPNFMGFSALRVINDDVIDAGQGFGTHPHK DMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHSEYNPSKTEKLHLYQIWII PEETGITPRYEQRRFDAKQGKQLVLSPDAREGSLKVHQDMELYRWALAKDEQSVHQIAAN RRVWIQVVKGEVSINGTKATTADGLAIWDEQALSVHADSESEILLFDLPPV >gi|333596725|gb|GL892087.1| GENE 1931 2115623 - 2116660 1195 345 aa, chain - ## HITS:1 COG:yhhX KEGG:ns NR:ns ## COG: yhhX COG0673 # Protein_GI_number: 16131312 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 659 92.0 0 MTLHCAFIGFGKSTTRYHLPYVLHRKETWHVAHIYRRSAKPEEQSPQYSHIHFTSDLDEV LNDPQVKLVVVCTHADSHFDYAKRALEAGKNVLVEKPFTPTIAEAKELFALAKNKGLTVT PYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETNPGLPQDGSFYGLGVHTM DQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHG KKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREELKPETGDYGR VYDALYETLTNGAPNYVKESDVLTNLEILERAFEQASPATVTLAR >gi|333596725|gb|GL892087.1| GENE 1932 2116970 - 2117458 342 162 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 162 1 163 179 136 46 4e-30 MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSREMWQMRLGEQPGIKQLVACIDD IVVGHLCIDVAQRPRRSHVADFGICVGAQWQNRGVASALIRTMIDMCDNWLRVDRIELTV FVDNEPAIAVYKKHGFEIEGTGKRYALRNGEYVDAYYMARMK >gi|333596725|gb|GL892087.1| GENE 1933 2117544 - 2119289 2124 581 aa, chain - ## HITS:1 COG:STM3551 KEGG:ns NR:ns ## COG: STM3551 COG0405 # Protein_GI_number: 16766837 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Salmonella typhimurium LT2 # 2 581 1 580 580 1043 91.0 0 MMKPTFLRWVAIAALMAGGTFTVAANPPAAPPVSYGVEEDVFHPVRATHGMVASVDALAT QVGVDILKQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMMLRTKDGKTTAIDFREMAPS QASRDMFLDDQGNPDSKKSLTSHLATGTPGTVAGFSLALEKYGTMPLNKVVQPAIRLARE GFVVNDALADDLKTYGSEVIPNHENSKAIFWKDGEPLKKGDKLVQKNLAKSLELIAENGP DAFYKGAIADQIAEEMQKNGGLITKADLAEYRAVEREPISGTYRGYDVFSMPPPSSGGIH IVQILNILENFDMHKFGFGSADAMQVMAEAEKRAYADRSEYLGDPDFVKVPWQALTDKAY AKSIADEIDINKAKPSSEIRPGKLAPYESNQTTHFSVVDKDGNAVAVTYTLNTTFGTGIV AGNSGILLNNEMDDFSAKPGVPNVYGLVGGDANAVGPKKRPLSSMSPTIVVKDGKTWLVT GSPGGSRIITTVLQMVVNSIDFGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEQ RGQKVAVKEAMGSTQSIMVGPDGALFGASDPRSVDDLTAGY >gi|333596725|gb|GL892087.1| GENE 1934 2119412 - 2119783 566 123 aa, chain + ## HITS:1 COG:no KEGG:ECL_04806 NR:ns ## KEGG: ECL_04806 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 122 1 122 125 109 87.0 4e-23 MKRLLILTALLPFAALAQPINTLNNPNQPGYVIPSQQRMQTEMMSQQQQQKGMLNQQLKT QTQVQQQHLQNQMNTNTQRVQQGQMLEQPLPNANGGMLGGGMSQSSGQQHMLPTQQNGSM LNK >gi|333596725|gb|GL892087.1| GENE 1935 2119773 - 2120513 956 246 aa, chain - ## HITS:1 COG:ECs4295 KEGG:ns NR:ns ## COG: ECs4295 COG0584 # Protein_GI_number: 15833549 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 244 1 244 247 439 86.0 1e-123 MSNWPYPHIVAHRGGGKLAPENTLAAIDIGARFGHTMIEFDAKLSKDGEIFLLHDDNLER TSNGWGVAGDLPWRDLLKVDAGSWYSGEFKGEPLPLLAEVADRCRQHGMMANIEIKPTTG TGPLTGKVIALAARELWEGMTAPLLSSFDIDALEAAQNAVPELPRGLLLDEWQEDWRALT TRLGCVSIHLNHKLLDAARVTLLKEAGLHILVYTVNKPQRAAELLRWGVDSICTDAIDQI GPNFIY >gi|333596725|gb|GL892087.1| GENE 1936 2120510 - 2121580 1356 356 aa, chain - ## HITS:1 COG:ECs4296 KEGG:ns NR:ns ## COG: ECs4296 COG3839 # Protein_GI_number: 15833550 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 356 14 369 369 644 91.0 0 MAGLKLQAVTKSWDGKTQVIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGD IWIDRQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKGHIAERVKEAAR ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVMVMNKGIAEQIGTPVEVYEKPASRFVASFIGSPAM NLLDGRINTAGTHFELESGMALPINWYYRGYAGRKMTLGIRPEHIGLTSQADGGVPLVMD TLEMLGADNLAHGRWGAQKLVVRLPHQERPKAGSTLWLHMPENHLHLFDGETGQRV >gi|333596725|gb|GL892087.1| GENE 1937 2121582 - 2122427 1267 281 aa, chain - ## HITS:1 COG:STM3555 KEGG:ns NR:ns ## COG: STM3555 COG0395 # Protein_GI_number: 16766841 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 450 93.0 1e-126 MIENRRGLTIFSHTMLVLGIVVILFPLYVAFVAATLDTKAVFDTPMTLVPGGHLFENMKT IWTQGVGANSAPFWLMMLNSFIMAFGITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFIT LMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELIEAARID GASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIVQDVNLGTAVAGIKGMIAT GEGTTLWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK >gi|333596725|gb|GL892087.1| GENE 1938 2122424 - 2123311 1184 295 aa, chain - ## HITS:1 COG:STM3556 KEGG:ns NR:ns ## COG: STM3556 COG1175 # Protein_GI_number: 16766842 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 295 1 295 295 471 95.0 1e-132 MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSVQSVDPFGLSSQFVGLDNFT ALFHDSYYLDSFWTTIKFSALVTVSGLVASLFFAALVDYVVRGSRLYQTLMLLPYAVAPA VAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAA LQSIPRSLVEAAAIDGAGPVRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAG GPVQATTTLIYKIYREGFAGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ >gi|333596725|gb|GL892087.1| GENE 1939 2123428 - 2124744 1917 438 aa, chain - ## HITS:1 COG:STM3557 KEGG:ns NR:ns ## COG: STM3557 COG1653 # Protein_GI_number: 16766843 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 438 1 438 438 810 90.0 0 MTSLRHTALGLAIGLAFATNAMAVTTIPFWHSMEGELGKEVDSLAQRFNDTHPDYKIVPV YKGNYEQSLSAGIAAFRTGNAPALLQVYEVGTATMMASKAIKPVYEVFKEAGINFDESQF VPTVAGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLAEYTAKLK AAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLEAL NKKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRHYAKFNYGVGMMPYDADVKGAP QNAIIGGASLWVMQGKDNGTYKGVAEFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQ GFYSKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDS AVERGNQLLRRFEQSTKS >gi|333596725|gb|GL892087.1| GENE 1940 2125009 - 2125722 266 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 227 1 229 245 107 28 3e-21 MEKAMLTFDKVNAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSG RIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAHRDEYQTRIKWV YELFPRLWERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTI EQLRKEGMTIFLVEQNANQALKLADRGYVLENGRVVLEDTGDALLANEAVRSAYLGG >gi|333596725|gb|GL892087.1| GENE 1941 2125724 - 2126491 265 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 245 1 230 245 106 26 3e-21 MSQPLLSVNGLMMRFGGLLAVNNVNLDLHKKEIVSLIGPNGAGKTTVFNCLTGFYKPTGG TIMLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT PAFRRTQEEALDRAATWLDRIGLLQHANRQASNLAYGDQRRLEIVRCMVTQPEILMLDEP AAGLNPKETKELDELIAELRDHHDTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE IRNNPDVIRAYLGEA >gi|333596725|gb|GL892087.1| GENE 1942 2126488 - 2127765 2005 425 aa, chain - ## HITS:1 COG:STM3562 KEGG:ns NR:ns ## COG: STM3562 COG4177 # Protein_GI_number: 16766848 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 425 1 425 425 700 92.0 0 MKPMHFAMALLSAAMFFVLAGVFMGVQLGLDGTKLVVDTAPDIRWQWVFIGTGVVFLFQL LRPLFQKTLKNVSGPKFVLPAIDGTTVKQKLFLVALLVAAVAWPFMVSRGTVDIATLTMI YVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGF LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGISQIPKPTFFGLEFSRTAR EGGWDTFSNFFGIKYDPSDRVIWLYLVALLLVVITLFVINRLLRMPLGRAWEALREDEIA CRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG SQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKSAEA KGEQA >gi|333596725|gb|GL892087.1| GENE 1943 2127762 - 2128688 1408 308 aa, chain - ## HITS:1 COG:STM3563 KEGG:ns NR:ns ## COG: STM3563 COG0559 # Protein_GI_number: 16766849 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Salmonella typhimurium LT2 # 1 308 1 308 308 476 96.0 1e-134 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAA LMMMGIDSSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQN YVSLTEGSRDVALPSLFNGQWIVGASENFSASVTTMQLVIWVVTFIAMLALTLFIRYSRM GRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLILVLLVMPTGIL GRPEVEKV >gi|333596725|gb|GL892087.1| GENE 1944 2128735 - 2129844 1443 369 aa, chain - ## HITS:1 COG:livK KEGG:ns NR:ns ## COG: livK COG0683 # Protein_GI_number: 16131330 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli K12 # 1 369 1 369 369 667 92.0 0 MKRNAKTLIAGMVALSISHAAMADDIKVAVVGAMSGPVAQWGDMEFNGARQAIKDINAKG GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMI TPGATNPELTQRGYQHIMRTAGLDSSQGPTAANYILETVKPQRIAIIHDKQQYGEGLARS VQDGLKKGGANIVFFDGITAGEKDFSALIARLQKENIDFVYYGGYYPEMGQMLRQARATG LKTQFMGPEGVGNASLSNIAGDSAEGMLVTMPKRYDQDPANKAIVDALKAQKKDPSGPYV WITYAAVQSLATAMDRTGSKAPLDLVKDLKAHGANTVIGPLNWDEKGDLKGFEFGVFKWH ADGSSSAAK >gi|333596725|gb|GL892087.1| GENE 1945 2130269 - 2130652 543 127 aa, chain + ## HITS:1 COG:no KEGG:ECL_04819 NR:ns ## KEGG: ECL_04819 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 127 1 127 129 238 96.0 5e-62 MKLTIVRLVTFSDQDHIDLGKIWPEYSPSSLTVDENHRIYAARFNERLLAAVRVTLSGTE GALDSLRVRDVTRRRGVGQYLIEEVIRENPSVTSWWMADVGVEDRGVMAAFMQALGFTAQ ANGWEKR >gi|333596725|gb|GL892087.1| GENE 1946 2130830 - 2131927 1565 365 aa, chain - ## HITS:1 COG:ECs4309 KEGG:ns NR:ns ## COG: ECs4309 COG0683 # Protein_GI_number: 15833563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli O157:H7 # 1 365 20 386 386 667 94.0 0 MNMKGKALLAGCIALAFGTAQADIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGI KGEKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITP AATAPELTARGYKLILRTTGLDSDQGPTAAKYIVEKVKPQRIAIVHDKQQYGEGLARAVQ DNLKKANANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLK TQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPVVDAIKAKKQDPSGAFVWT TYAALQSLQAGLNQSADPAEIATWLKANSVETVMGPLSWDEKGDLKGFEFGVFDWHANGT ATDAK >gi|333596725|gb|GL892087.1| GENE 1947 2132125 - 2133330 1437 401 aa, chain - ## HITS:1 COG:goaG KEGG:ns NR:ns ## COG: goaG COG0160 # Protein_GI_number: 16129263 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 400 21 420 421 563 69.0 1e-160 MCNFYADKAENATVWDVEGNEYIDFAAGIAVLNTGHRHPDVIAAIEKQLHAFTHTAYQIV PYEGYVALAERLNQRVPIDGPAKTAFFSTGAEAVENAVKIARAYTRRPGLITFGGAFHGR TFMTMALTGKVAPYKLGFGPFPGSVYHAQFPNNLHGVTTAEALKSLDRIFKADIAPDQVA AIIIEPVQGEGGFNVAPADFMQSLRALCDTHGILLIADEVQTGFARTGKLFSMENHCVKP DLITMAKSLAGGMPLSAVSGRAEVMDAPAPGGLGGTYAGNPLAIAAAHAVLDVIDEEDLC TRAAHLGHHLVEVLNKAKDGCPYIADIRGQGSMVAVEFTDPQTGQPSPEFTRQVQERALN EGLLLLSCGVYGNVIRFLYPLTIPEAQFRKALDIISASLTR >gi|333596725|gb|GL892087.1| GENE 1948 2133526 - 2134383 1128 285 aa, chain - ## HITS:1 COG:ECs4310 KEGG:ns NR:ns ## COG: ECs4310 COG0568 # Protein_GI_number: 15833564 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 285 1 284 284 480 91.0 1e-135 MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKTLILSHLRF VVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM TFDMSADDDASDSQPMAPVLYLQDKTSNFAEGIEEDNWEDQAANKLTFAMEGLDERSQDI IRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA >gi|333596725|gb|GL892087.1| GENE 1949 2134634 - 2135671 1145 345 aa, chain - ## HITS:1 COG:STM3569 KEGG:ns NR:ns ## COG: STM3569 COG2177 # Protein_GI_number: 16766855 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 1 345 7 351 351 637 91.0 0 MNQIRQFSNRFDRFRKPQGGGDGNRNAPKRAKPTPKPNSRKTNVFNEQVRYAFQGALQDL KSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAASQYYPSPQITVYLDKALDDNAAAQV VGQIQAEQGVEKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQGTDS LNTLRDRITRINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVIGNSVRLS IFARRDTINVQKLIGATDGFILRPFLYGGALLGFSGAFLSLILSEILVMRLSSAVTEVAQ VFGTKFDISGLGFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPD >gi|333596725|gb|GL892087.1| GENE 1950 2135682 - 2136347 349 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 216 4 220 223 139 35 6e-31 MIRFEHVSKAYLGGRQALQGVTFHLQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIW FSGHEISRLKNREVPFLRRQIGMIFQDHHLLMDRTVFDNVAIPLIIAGASYDDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLF EEFNRVGVTVLMATHDMGLISRRSYRMLTLSDGHLHGGHGE >gi|333596725|gb|GL892087.1| GENE 1951 2136350 - 2137825 751 491 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 192 488 21 321 336 293 48 1e-77 MAKQKKRGFFSWLGFGEKEQETEQKTEEQQVVEEQSQPETPVETAAVVEAEEPAHSKEEI ESFAEEVVEVTEQVQESEKPEPVIVETLNEAPQAAIEHEELPLPEEVKTEEVSAEEVSAE EWQAEAETVEIVEAVEEEAALEPELTDEELEAQALAAEAAEEAVIVVPVEEQAEEAIVQE QEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTR KIITNLTEGASRKQLRDAEALYGLLKDEMGEILAKVDEPLNIEGKMPFVILMVGVNGVGK TTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFD AIQAAKSRNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDEDAPHEIMLTIDASTGQN AISQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKAD DFIEALFARED >gi|333596725|gb|GL892087.1| GENE 1952 2137952 - 2138554 586 200 aa, chain + ## HITS:1 COG:yhhF KEGG:ns NR:ns ## COG: yhhF COG0742 # Protein_GI_number: 16131337 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Escherichia coli K12 # 1 197 1 197 198 334 81.0 6e-92 MKKPTRAPAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPSMVDANCLDCF AGSGALGLEALSRYAASATLLEMERGVAQTLQQNLATLKATNAKVVNTNTLSFLAQNGTP FNVVFVDPPFRKGLLEETLSLLEKNGWLADDALIYVESEVENGLPPVPVHWDLHREKVAG QVAYRLYHRQAQGGSDASTD >gi|333596725|gb|GL892087.1| GENE 1953 2138538 - 2138819 449 93 aa, chain + ## HITS:1 COG:ECs4315 KEGG:ns NR:ns ## COG: ECs4315 COG3776 # Protein_GI_number: 15833569 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 3 90 1 88 89 112 71.0 1e-25 MPVLINVGRLLMLGVWAFLILNLVHPFPRPLNIFINVALIFTAFMHALQMVMLKNGLPKD GPPMTGWQQLRVFIFGVFELLVWMKKFKAQVKK >gi|333596725|gb|GL892087.1| GENE 1954 2138915 - 2139274 447 119 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3614 NR:ns ## KEGG: ECIAI1_3614 # Name: yhhM # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 119 1 119 119 177 78.0 9e-44 MSKMPLFFIIVVAIIVVAASFRFVQQRREKADNDAAPLMQKRVVVTNKREKPLNDRRSRQ QQVTPAGTTMRYEASFKPETGGLEITFRLEAQQYHQLTVGEKGTLSYKGSRFEGFVPER >gi|333596725|gb|GL892087.1| GENE 1955 2139404 - 2140030 819 208 aa, chain + ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 300 90.0 1e-81 MLWSFIAVCFSAWLYVDASYRGPAWQRWLFKPVTLLLLLLLAWQAPMFNAISYLVLAGLC ASLIGDALTLLPRQRLLYAVGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVIGALLIAV IWSRLEEMRLPICTFIAMTLVMVWLAGELWFFRPTSQAMSAFFGAALLLLGNIVWLGSHY RRRFRADNAISAACYFAGHFLIVRSLYI >gi|333596725|gb|GL892087.1| GENE 1956 2140107 - 2142278 2574 723 aa, chain + ## HITS:1 COG:STM3576 KEGG:ns NR:ns ## COG: STM3576 COG2217 # Protein_GI_number: 16766862 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 722 1 731 732 956 77.0 0 MSTPETPKKVPQFSALKLSPVPLKDDCCCEGACETQVDALPESGNHYSWVVNGMDCAACA RKVENAVKQVPGVNHVQVLFATEKLLVSAENDVSKQVEAAVSKAGYTLRSETAPAEKTSP LKENLPLITLIIMMALSWGLEQINHPFGNLAFIATTLVGLFPIARQALRLMRSGSWFAIE MLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARKGVSALMALKPETATRIHE GKRETVAINTLRPGDVIEVAAGGRLPADGTLVTATASFDESALTGESIPVARAAGEKVPA GATSVDRLVQLTVLSEPGDSAIDRILKLIEEAEERRAPVERFIDRFSRIYTPAIMLVALL VTVVPPLFFGAPWEGWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAAL EQLSQVQHIAFDKTGTLTVGKPQVTGVYPQDISEDALLTLAAAVEQGSTHPLAQAIVREA QERGLNIPSATAQRALVGSGIEAVVDGKKVLIAAAGAFADPQVEALEQAGQTVVAVMQDG VPMGMLALRDTLRDDAKDAINALHRLGVQGVILTGDNPRAAAAIAGELGLAFKAGLLPAD KVRAVTEMNARAPLAMVGDGINDAPAMKAATIGIAMGSGTDVALETADAALTHNRLTGLA QMIDLARATRANIRQNIGIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLL RQR >gi|333596725|gb|GL892087.1| GENE 1957 2142368 - 2143654 988 428 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020581|ref|YP_526408.1| ribosomal protein L16 [Saccharophagus degradans 2-40] # 1 422 3 426 435 385 44 1e-105 MDAFVLLFTLAILLALGMPVAFAVGLSAVAGALWIDLPLEALMIQITSGVNKFTLLAIPF FILAGAIMAEGGIARRLVNFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGSV MIPEMEKKGYPREYAAAVTASGSVQAILIPPSHNSVIYSLAAGGTVSIATLFIAGVLPGL LLGMGLMALCLCFARKRGYPKGDKIPFRQALKIVLDALWGLMTVVIILGGILSGIFTATE SAAVACLWAFFVTMFIYRDYKWNELPKLMCRTVKTVTIVMILIGFAAAFGAVMTYMQLPM RITEFFTSLSDNKYVILMYLNIMLLLLGTLMDMAPIILILTPVLLPVTNALGIDPVHFGM IMMVNLGIGLITPPVGSVLFVASAVSKQKIEHVVRAMLPFYGMLLVILGMITYIPAISLW LPGVLGMQ >gi|333596725|gb|GL892087.1| GENE 1958 2143665 - 2144174 665 169 aa, chain - ## HITS:1 COG:YPO1578 KEGG:ns NR:ns ## COG: YPO1578 COG3090 # Protein_GI_number: 16121848 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Yersinia pestis # 1 167 1 167 168 204 63.0 7e-53 MSELYLKWMDRLYLLAMAVAGLSLLVMTIVIPIGIFSRYVLNRGESWPEPIAIICMVTFT FIGAAVSYRAGSHIAVNMLTDRLPASLQTLCARVVDLLMLLISGLMCWYSYWLCVELWEQ PVAEFPLLTSGESYLPLPVGSAILILFVLERLLFGSQENRPVVLIGNHT >gi|333596725|gb|GL892087.1| GENE 1959 2144187 - 2145158 460 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 [Algoriphagus sp. PR1] # 1 323 1 325 328 181 31 8e-44 MKTTLKPLLAALCLSAFACTVSAQTIKAADVHPEGYPNVVAVQHMGEKLKQQTDGKLEIK VFPGGVLGDEKQMIEQAQMGAIDMIRVSMAPVAAILPDIEVFTLPYVFRDEDHMHKVIDG DIGKQIGDKLTANPKSRLVFLGWMDSGTRNLITKEPVLKPDDLKGKKIRVQGSPVALATL KAMGANAIAMGVSEVYSGMQTGVIDGAENNPPTFIAHNYMPVAKNYTLSGHFITPEMLLY SKVKWDKLSADEQQKILTLAREAQIEQRKLWNDYNAQALAKMKAGGVQFHDIDKAVFIKA TEPVRAQYGDKHQDLMKAIADVQ >gi|333596725|gb|GL892087.1| GENE 1960 2145339 - 2145581 195 80 aa, chain - ## HITS:1 COG:ECs4319 KEGG:ns NR:ns ## COG: ECs4319 COG0425 # Protein_GI_number: 15833573 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 80 1 80 81 146 90.0 9e-36 MTDLFSSPDHTLDAQGLRCPEPVMMVRKTVRNMQSGETLLIVADDPATTRDIPGFCNFME HELVAQQTETLPYRYLIRKG >gi|333596725|gb|GL892087.1| GENE 1961 2145751 - 2146416 807 221 aa, chain + ## HITS:1 COG:ECs4320 KEGG:ns NR:ns ## COG: ECs4320 COG1738 # Protein_GI_number: 15833574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 220 1 220 221 344 91.0 9e-95 MNSFTQSQRVKALFWLSLFHLLVIISSNYLVQLPISIFGFHTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFAVMIPALFVSYAISSLFYMGSWQGFDALMHFNLFVARIAAASFMAYA LGQILDVHVFNRLRQNHRWWMAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL VDYAFKVLISLVFFLPMYGVLLNMLLKRLADKSEISALQAG >gi|333596725|gb|GL892087.1| GENE 1962 2146489 - 2147046 847 185 aa, chain + ## HITS:1 COG:no KEGG:ECL_04837 NR:ns ## KEGG: ECL_04837 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 185 1 185 185 299 95.0 4e-80 MRNLVKYVGIGLLVVGLAACDNSDTKTPAQGASAESNATGQPVSLMDGKLSFSLPADMTD QSGKLGTQANNMHVYSDATGQKAVIVIVGDDTSEDLGVLAKRLEDQQRSRDPQLQVVTNK SIELKGHTLQQLDSIISAKGQTAYSSVVLGKVDNKLLTMQITLPADNQQKAQTAAENIIN TLVIQ >gi|333596725|gb|GL892087.1| GENE 1963 2147182 - 2148231 1298 349 aa, chain + ## HITS:1 COG:yhhT KEGG:ns NR:ns ## COG: yhhT COG0628 # Protein_GI_number: 16131346 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 349 28 376 376 520 87.0 1e-147 MTASPPDKAGLHILLKLACLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFLRRGIS RPVAITIVVMVMLVVLTALFGVLAASLSEFSTMLPQYNKELTRKLVDLQRMLPFVNLHIS PERMLRRMDSEKVMTYATTLMTGLSGAMASILLLVMTVVFMLFEVRHVPYKLRFALNNPQ IHIAGLHRALKGVSKYLALKTLLSLWTGVIVWLGLVLLDVQFALMWGVLAFLLNYVPNIG AVLSAVPPMIQAFLFNGFYECMLVGALFLVVHMVLGNILEPRMMGHRLGMSTMVVFLSLL IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG >gi|333596725|gb|GL892087.1| GENE 1964 2148357 - 2149079 656 240 aa, chain + ## HITS:1 COG:no KEGG:ECL_04840 NR:ns ## KEGG: ECL_04840 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 240 1 240 240 412 87.0 1e-114 MKFTLTLIDWQARAPGLSDADEWQAWSRRSDAIDPAAPLAKLTHLPMMTARRLNSGSKLA VDLGLMMLHKHRIDAVVYSSRHGELERNFRILQALAAEEPVSPTDFAMSVHNSAVGNLTI AARQPVVSSSVSAGMDTFQQSLCDVLSLLHAGYSRVLLVDFDGQLPDFYHAGLPPQMPVW PYALALVIEAGNTLSCETHPNHTPEEPALPQSLQFLRHYLRDERQFTLPGERLLWQWTRQ >gi|333596725|gb|GL892087.1| GENE 1965 2149076 - 2149891 775 271 aa, chain + ## HITS:1 COG:Z4852 KEGG:ns NR:ns ## COG: Z4852 COG0204 # Protein_GI_number: 15803990 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 1 271 1 271 273 330 68.0 1e-90 MKGLRSRLDRVWRMLMTGLCFALFGLGGLTLSLVWFNLLLIFQRDRTQRRRLARRTISAS FRLFLAVVRGVGVLDYRFNNLDVLRAERGCLVIANHPSLLDYVLLASVMNETDCLVKSAL LRNPFVSGVIRAADYLINSEADTLLTASQQRLAQGDTLLIFPEGTRTRVGEAITLQRGAA NITVRCNSAVRVVVIHCSERMLDKQSSWYNVPPNKPVFTVDVRERINIHDFYDASQHEPA LAARQLNRHMQHQLTTGLQSLSGTKDASALS >gi|333596725|gb|GL892087.1| GENE 1966 2149872 - 2150129 332 85 aa, chain + ## HITS:1 COG:ECs4328 KEGG:ns NR:ns ## COG: ECs4328 COG0236 # Protein_GI_number: 15833582 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 134 88.0 3e-32 MQALYLEIKNLIISTLNLEELTPEDIDTDAALFGDGLGLDSIDALELGLAVKNQYGVVLS AESDEMRQHFYSVATLAAFIHQQRA >gi|333596725|gb|GL892087.1| GENE 1967 2150141 - 2150392 310 83 aa, chain + ## HITS:1 COG:ECs4329 KEGG:ns NR:ns ## COG: ECs4329 COG0236 # Protein_GI_number: 15833583 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 83 1 83 83 102 78.0 3e-22 MTEQQTIYQEVSALLITLFEVAPEDITPEARLYEDLDLDSIDAVDMVVHLQKKTGHKIKP ETFKAVRTVQDVVDVVEQLQRDA >gi|333596725|gb|GL892087.1| GENE 1968 2150403 - 2150963 606 186 aa, chain + ## HITS:1 COG:ECs4330 KEGG:ns NR:ns ## COG: ECs4330 COG4648 # Protein_GI_number: 15833584 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 185 7 191 193 199 69.0 2e-51 MPILPALTGLMLLAWPFLIGFGLANNSLHGILPVMALVLLLRVCQARRQGGPLRYLFVSV ALAGIVLCAASYILDAHQWVLFYPVVVNLVMLVVFGGSLWTAMPVVERLARLREPDLSPV GIRYTRRVTQIWCVFFIVNGAIALFTVLHADIRLWTLWNGMIAYLLMGTLMAVEWLVRQR VMKNDV >gi|333596725|gb|GL892087.1| GENE 1969 2150956 - 2152302 1271 448 aa, chain + ## HITS:1 COG:ECs4331 KEGG:ns NR:ns ## COG: ECs4331 COG0365 # Protein_GI_number: 15833585 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli O157:H7 # 1 448 1 453 453 579 65.0 1e-165 MFNPLPLSQWLSAPRPDDTPVAWRDDRLWTLGDLRHDVTQLVDTLRHEDGERWALCFEDG YLFIVALLATLHAGKTPVLPGHSRAAQLNEQRALFSGILSDTTLDFQGRQRRVTSAQRAG HPFSPLPAIDEMRTIELYTSGSTGAPQRVCKPVISLDREARLLAAHFGERLAGCHVVASV VLHHLYGLTFRVVLPMALGLPLHASLLNYAEQLSALPGDKRYLFISSPAFLKRLDESLTP PPVNLLFSAGGALPWQEVTAVQAWLNVWPDEIYGSTETGVMAWRYRQEESTRWQPFPGVA FHGDRVTSPLIPEAEGIALDDILHFTADGQFSLVGRRGRVVKLEDKRISLDDIERRLLAL DGIREAAALTVTRGGRQGIGVLLVLNEAARQQHDQGKKAQVLAWRRALRPWLEPVAVPRY WRIVDEIPVNSMNKRVTAQLQELFHEDP >gi|333596725|gb|GL892087.1| GENE 1970 2152289 - 2152639 330 116 aa, chain + ## HITS:1 COG:ECs4332 KEGG:ns NR:ns ## COG: ECs4332 COG0764 # Protein_GI_number: 15833586 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 116 1 117 117 164 71.0 3e-41 MKIPEIGRLQPDPQHLEITLYLDPGLLWFKGHFAVQPLLPGVAQLDWVMHYASALAPGYR FHSIQNVKFAAPLLPENTVTLALAWQPERQMLTFSYQRHAGNARHTASSGKIRLCQ >gi|333596725|gb|GL892087.1| GENE 1971 2152630 - 2154321 1601 563 aa, chain + ## HITS:1 COG:Z4858_2 KEGG:ns NR:ns ## COG: Z4858_2 COG4261 # Protein_GI_number: 15803996 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 247 563 1 312 312 498 76.0 1e-140 MSVTFRPCVLIPCYNHGAMMASVLARLAPFDLPCLMVDDGSDETTRRVLEDLAAAHPQIT LLRLAENSGKGAAVMQGLKACADRGFTHAVQVDADGQHAIEDIPRLLALAERHPDALISG QPVYDDSIPRSRLYGRWITHVWVWIETLSLQLKDSMCGFRIYPIAPVLRLAADTPLGRRM DFDTEVMVRLYWQGNTSYFLPTRVTYPPDGVSHFDALKDNVRISWMHTRLFLGMLPRIPS LLMRRRSQHWAQQQEVKGLWGMRLMLRVWQLLGRKAFTILLWPVTAVYWLTARSARLASQ QWLARVKTVIAQRQMPQPARLNSFSHFLRFGHAMLNKVASWRGEMKLHRDLVFAPGAQEA LGLDDPQGKLLLASHLGDVEACRALAQREGAKTINALVFSDNARRFKQVMEEMAPQAGIH LMPVTDIGPETAILIKEKLDRGEWVAIVGDRIAVTPQRGGSWRVIWSEFMGQPAPFPQGP FILASILRCPVVLIFALCQQGKLTLHCEPFADPLLLPRGERQQALQQTVDRYAQRLEHYA LMSPLDWFNFFDFWQLPEINEKE >gi|333596725|gb|GL892087.1| GENE 1972 2154325 - 2154747 533 140 aa, chain + ## HITS:1 COG:ECs4334 KEGG:ns NR:ns ## COG: ECs4334 COG0824 # Protein_GI_number: 15833588 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 247 85.0 4e-66 MLTDPRFTAEVEITVPFHDVDMMGVVWHGNYFRYFEIAREALLNQFDYGYRQMKASGYVW PVVDTRVKYRDAVTFEQRIRVRAHIEEVENRLRIAYQIFDAQTGKRTTTGYTIQVAVEEA SREMCFVSPAILFERMGIAP >gi|333596725|gb|GL892087.1| GENE 1973 2154744 - 2155310 734 188 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3893 NR:ns ## KEGG: Ent638_3893 # Name: not_defined # Def: outer membrane lipoprotein carrier protein LolA # Organism: Enterobacter_638 # Pathway: not_defined # 1 188 1 188 201 301 87.0 1e-80 MKWITLLALLISPVVSAVTLDELQQRFAEQPVVRAHFEQTRTIKDMPQPLRSQGEMLIAR DNGLLWDQKAPFPMTLLLDDQRMVQIVNGQPPQTITADTNPQMFQFNHLLRALFQADRKV LEENFRIDFKDLGEGRWSLVLTPITTPLDKIFTSLDLKGAIYLESIRLNDKQGDTTDIAL SRHQLTPA >gi|333596725|gb|GL892087.1| GENE 1974 2155314 - 2157635 2871 773 aa, chain + ## HITS:1 COG:Z4861 KEGG:ns NR:ns ## COG: Z4861 COG4258 # Protein_GI_number: 15803999 # Func_class: R General function prediction only # Function: Predicted exporter # Organism: Escherichia coli O157:H7 EDL933 # 1 769 1 768 772 1068 78.0 0 MQNASALPHRNALRPALLWAAVCLILLGVLLSLLPGARLNSSVLAMLPKQTLGAIPPALN DGFMQRLDRQLIWLVSPGKQPDPRVAQQWLTLLQRSQALNVVKGPLDAAGQQAWGDFFWQ HRNGLIDPATRARLQNGGEAQAQWILSQLYSAFSGVSGKELQNDPLMLMRGAQLALAKNS QKMQLMDGWLVTKDEAGNYWYLLHGELAGSSFDMQQTHQFVTTLNTLQKALKSQYPQAQL LSRGTVFYSDYASQQAKKDISTLGVATVLGVILLIVSVFRSVRPLLLSLLSIAIGALAGT VVTLLLFSELHLMTLVMSMSIIGISADYTIYYLTERMVHGAEHSPWQSLAKVRNALLLAL LTTVVAYLFMMLAPFPGIRQMAVFAAAGLSASCLTVIFWHPWLCRGMPIRPVPLRGMMQR WLNAWRDRKALAVGLPVALALLSAIGIASLRVDDDIARLQALPQDILAQEKTITALTGQN VDQKWFVVYGASAQETLERLEAFTPALAQAQQAGAFTRWRTLPLNSLARQKSDLHLLRNA APTVMKMLKSTGLNAVEPNLNAMPVSVEAWLASPASEGWRLLWLTLPDGTSGVLVPVDGV KNSAALGELAARHPGVVWVDRKASFDSLFALYRSLLTGLLGVALAVIACGAMVRLGWRKG LVALVPSVLSLGGGLAMLALTGHPVNLFSLLALVLVLGIGINYTLFFSNPRGTPLTSMLA ITLAMMTTLLTLGMLVFSTTQAISSFGIVLVSGIFTAFLLAPLAMPTNKENLP >gi|333596725|gb|GL892087.1| GENE 1975 2157632 - 2158210 620 192 aa, chain + ## HITS:1 COG:no KEGG:ECL_04851 NR:ns ## KEGG: ECL_04851 # Name: not_defined # Def: lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 192 2 193 193 317 85.0 2e-85 MTRFIRLAAVMMALLLAGCSHTTNRDDTRPQAWLQPGTRVTLPPPGITPALRAQQLLTGS FKGQTQSLVVMLNADGDKVTLAGLSSVGIRLFLATYDDTGIHTEQSVVMPQLPPASQVLA DVMLSHWPLSAWRPQLPKGWTLNDTDTRRELRNPDGKLVTEIVYLNRNGRREPISIAQHA FHYHITIQYLGD >gi|333596725|gb|GL892087.1| GENE 1976 2158212 - 2159378 1475 388 aa, chain + ## HITS:1 COG:ECs4338 KEGG:ns NR:ns ## COG: ECs4338 COG0304 # Protein_GI_number: 15833592 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 387 1 387 389 567 76.0 1e-161 MIYLSAVGMVNALGNSADDIAANLIAGVAPGMRHRAGWLQGFPEAVLGGVEGELPPVPES FSAHRSRNNQLLLAALAQIRPAVDAAIARVGRDRVAVVLGTSTSGLDEGDEYVRRAQNGE RSTQWQYPQQELGDPSRFLARWLALDGPAYTISTACSSSARAIISGRRLIEAGLVDVAIV GGADSLSRMPVNGFNSLESFSPTLCEPFGRNRRGITIGEAAALMVLTREPGEIALLGAGE SSDAYHISAPHPQGEGAIRAITQALNEAGMTAADVGYINLHGTATPLNDRIEAQVIHDLF GDRVPCSSTKHLTGHTLGAAGITEAALSWLILTRDLPLPPQDFSRYAPDDTLPTFGLLHQ SAPLTKPVILSNSFAFGGNNASLLLGRA >gi|333596725|gb|GL892087.1| GENE 1977 2159378 - 2159851 445 157 aa, chain + ## HITS:1 COG:ECs4339 KEGG:ns NR:ns ## COG: ECs4339 COG4706 # Protein_GI_number: 15833593 # Func_class: I Lipid transport and metabolism # Function: Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase # Organism: Escherichia coli O157:H7 # 3 154 4 152 154 221 72.0 3e-58 MRYLPPGDYLPHDTPMLLLESVESVTDDRAVCRVTVNDRGVLAPFLDADGNLPGWFALEL MAQTVGVWSEWHRMQKGLPHCALGMVLGARELVCDAGHFAAGSTLTITIERLMQDDRFGS FECAIQADNASLATGRVNTFQPSEEELTTLFNQGTPS >gi|333596725|gb|GL892087.1| GENE 1978 2159848 - 2160576 903 242 aa, chain + ## HITS:1 COG:ECs4340 KEGG:ns NR:ns ## COG: ECs4340 COG1028 # Protein_GI_number: 15833594 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 2 242 3 243 243 398 87.0 1e-111 MRSVLVTGASKGIGRAIALQLAADGFTVGVHYHRDEAGAQETLEAIVRAGGAGRLLTFDV GNREQCRTVLEQEIADHGAWYGVVSNAGITRDGAFPALSDEDWDSVIHTNLDSFYNVIHP CIMPMIGTRKGGRIITLSSVSGIMGNRGQVNYSAAKAGIIGATKALATELAKRKITVNCI APGLIDTGMIEMDDAALNAAMSMIPMQRMGQAEEVAGLASYLMSDKAGYVTRQVISINGG ML >gi|333596725|gb|GL892087.1| GENE 1979 2160573 - 2161802 1298 409 aa, chain + ## HITS:1 COG:ECs4341 KEGG:ns NR:ns ## COG: ECs4341 COG0304 # Protein_GI_number: 15833595 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 408 1 408 409 708 86.0 0 MTRRVVITGMGGVTAFGEDWPTISRRLRGYENAVRTMTEWQAYDGLQTLLAAPIEDFTLP AHYTRKRIRAMGRVSLLSTRATELALEQAGLIDDAVLTNGQTGIAYGSSTGSTGPVSEFA SMLTEKHTHNITGTTYVQMMPHTTAVNTGLFFGLRGRVIPTSSACTSGSQAIGYAWEAIR HGYQTVMVAGGAEELCPSEAAVFDTLFATSQRNDAPKTTPSPFDVQRDGLVIGEGAGTLV LEALDHARARGATIYGEIVGFATNCDAAHITQPQRETMQVCMEQSLAMAGLGPQDIGYIS AHGTATDRGDIAESQATAAIFGDRVPISSLKSYFGHTLGACGALEALLSLHMMREGWFTP TLNLRQPDEQCGALDYIMGETRPIDCEFIQSNNFAFGGINTSIIIKRWA >gi|333596725|gb|GL892087.1| GENE 1980 2161805 - 2162398 560 197 aa, chain + ## HITS:1 COG:STM3583 KEGG:ns NR:ns ## COG: STM3583 COG2091 # Protein_GI_number: 16766869 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Salmonella typhimurium LT2 # 1 190 1 189 192 270 74.0 2e-72 MYQFVLGKISTLSADPLASTLADRAPQGARHASWLAGRTLLARTLSPSPLPEIIYGEQGK PAFANGHPLWFNLSHSGDDIALLMSDEGEVGCDIEVIRPRENWQALANAVFSLTEHDELE REAPEEQLSAFWRIWTRKEAIVKQRGGSAWQIVSIDSTAQSLPVSQLRFGSLSLAVCTPT PFTLTADSVSYSGISAA >gi|333596725|gb|GL892087.1| GENE 1981 2162458 - 2162964 685 168 aa, chain - ## HITS:1 COG:VC2240 KEGG:ns NR:ns ## COG: VC2240 COG3479 # Protein_GI_number: 15642238 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phenolic acid decarboxylase # Organism: Vibrio cholerae # 4 164 3 163 174 238 60.0 5e-63 MNTFDKHDLSGFVGKHLVYTYDNGWNYEIYVKNENTLDYRIHSGLVGNRWVKDQQAYIVR VGESIYKISWTEPTGTDVSLIVNLGDSLFHGTIFFPRWVMNNPEKTVCFQNDHIPLMNSY RDAGPAYPTEVIDEFATITFVRDCGANDDSVINCAASELPANFPENLK >gi|333596725|gb|GL892087.1| GENE 1982 2163064 - 2163945 846 293 aa, chain + ## HITS:1 COG:PA3225 KEGG:ns NR:ns ## COG: PA3225 COG0583 # Protein_GI_number: 15598421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 286 5 296 309 142 35.0 7e-34 MHKTTLEQWALLEKVIEAGSFAKAAEETHRSQSSVSYNLSLLQERLGVALLMTEGRRAVL TPAGELLLNQVKPLLKAFAYVETRAATLRSGMRTRIDLMVDSIFPRSRLFAILRQFQQLY PQTQVRLTEVLENSRTDALNDEADVMVLTRRQDITGLGEWLMNIDFVAVAHHAHPLFALD TPLNDEMLRPWPRIQIADSQPTVRPTGESWTFSTIDAAIEAVMYQVGYGWLPEERIQAPL QQGILKILPLSHGVRRATPLHLIVKRSLSPLDEQVETLLRLFKQEPSSSTATL >gi|333596725|gb|GL892087.1| GENE 1983 2163977 - 2164771 862 264 aa, chain + ## HITS:1 COG:PA1344 KEGG:ns NR:ns ## COG: PA1344 COG1028 # Protein_GI_number: 15596541 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 263 1 263 264 288 57.0 9e-78 MKIDLTGKVALVTASTGGIGFAIARGLAESGAEVIVNGRSIDSVNKGIQALQQVVPGVQV RAAIADLSAQEGVDELLRVATHVDILVNNAGIYGQQDFYSTDDETWERYWQTNVMSGVRL SRALLPGMVQKGWGRVVFISSESACNIPADMIHYGVTKTAQLSLARGLAKFVAGSGVTVN SVLPGPTMSDGFAAMMKDEIERTGKSLEQLAKAFVMTNRPSSVIQRAATVEEVANMVVYV CSMQASATSGAALRVDGGVVDDIV >gi|333596725|gb|GL892087.1| GENE 1984 2164878 - 2165540 711 220 aa, chain + ## HITS:1 COG:PA5547 KEGG:ns NR:ns ## COG: PA5547 COG0560 # Protein_GI_number: 15600740 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 16 207 15 206 207 236 59.0 2e-62 MTNMIADEAVAKSSVLSVFDFDGTLTHHDSFIPFLRFAFGKRYFAGRLVRMALPTLHCVR RKLTRDELKEVLIKTFLTGVDEHWLRQQAEAFCEKYWNKLMRPEGVLAVANEVNSGAEVT ICSASPALVLQPWADKLGIKLIGTQLEVKDGKLTGRITGHNCRCAQKVARLEKVYGDLNA YHLRAWGDTRGDHELLAAAQDPHWRHFHHPSKRRNSPIKG >gi|333596725|gb|GL892087.1| GENE 1985 2165601 - 2166626 1437 341 aa, chain - ## HITS:1 COG:ECs1354 KEGG:ns NR:ns ## COG: ECs1354 COG0861 # Protein_GI_number: 15830608 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 341 1 341 346 533 80.0 1e-151 MSAAHLGFPTETVVVFVVMAIGAMFIDLFMHRHDKPISLKSAVMWSIFWVMMAMAFAGFL YVHHGAEMASLFLTGYALEEVLSVDNLFVMMAIFAWFGVPDKYRHRVLYWGVLGAIVFRG IFVAIGTSLLSLGPYVEVIFALVVGWTAVMMLKRNEESDEVEDYSGHLAYRLVKRFYPVW PKISSHAFILTQKEVDAELEKPENKDVMVGRVKKAKRYATPLLLCVAVVELSDVMFAFDS VPAIIAVSREPLIIYSAMMFAILGLRTLYFVLEALKQYLVHLEKAVVLLLFFVAFKLGLN ATDHFWHHGYNIGATASLFVVLGVLALGIIASVMFPGKREA >gi|333596725|gb|GL892087.1| GENE 1986 2167013 - 2168290 1268 425 aa, chain + ## HITS:1 COG:RSp0182 KEGG:ns NR:ns ## COG: RSp0182 COG0477 # Protein_GI_number: 17548403 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 1 370 30 401 453 296 42.0 6e-80 MRKVIWRILPFLIVSYLVSIIDRGNIGMASLQMNEDLGLSKAAFGFASSLYFVAYFLFEV PSNLAMQKVGARLWIPRIMISWGVVSMCMALVQNTTSLYIVRFLLGAAEAGFFPGVVLFL TWWIPSRYRARIIASFMVAIPLANFIGSPLSGLILSMDGWLGLRGWHLLFIIEGLPAVLL GVAAWFVLRDRPHQANWLNAEQKKWLETTLETERQQQKNIGHQTTWQLLRHRQIWLLALI YAGASSAGTTISVWSPQLLKSFHLDNLETGLFNAIPYGLASVLMIVWGRSSDRTNERRWH TALTLFMIAAGVFAAFVSVSLSATIVILSIMLIGAYSMKGPFWALASGWMSSTSAAAGLA AIGAIANLIGGAVMVNAYGIINERTGSHTLAMLPLAGLCVAGGIAVLVMGRQARNAQLHE KQVTH >gi|333596725|gb|GL892087.1| GENE 1987 2168327 - 2169064 722 245 aa, chain - ## HITS:1 COG:BH1819 KEGG:ns NR:ns ## COG: BH1819 COG1414 # Protein_GI_number: 15614382 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 9 224 8 248 252 79 27.0 8e-15 MGNEGVVAVEKALALLDCFRPGDESLTLTALAQLSGYHKTTVYRLMNSLERMNYVVRHDD GNYALGPRLLYLGKLYEQSFHLSRVVQPELQALSQASQESASWYVLEGGQRLCLFRAEAS HGLRHSNLPGTQFPLDDSAISKVLRHWGLNDALPEGEPAVPLYTAGARDPHTAAFAMPVF GVNDKLIAALALTGPISRLTEDRREQGISQLMHATASRLSQKMGASKPFCQQFYGETQDT AEESL >gi|333596725|gb|GL892087.1| GENE 1988 2169234 - 2169926 623 230 aa, chain + ## HITS:1 COG:RSp1231 KEGG:ns NR:ns ## COG: RSp1231 COG0684 # Protein_GI_number: 17549452 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Ralstonia solanacearum # 16 207 6 197 216 139 41.0 5e-33 MSASETSLINRQVERVSTEQVHQAAEYQAAILADVAGRRGTLHGRIKPLAPHMAVAGPAV TVEVRPGDNLAIHAAMAVAQPGDVLVVDGKGDLTCALLGEIMATQAQASGIAGIIIDGAV RDADTLSKGHYPVFAAGLNPCGPTKSIPGRVNHPISIAGATVQAGDLVVADIDGVVVIPR DEVQAVIAMAKGKLETETRRLAAIREGDLRPHWLNDALRKAGMLSDGETL >gi|333596725|gb|GL892087.1| GENE 1989 2169926 - 2170873 616 315 aa, chain + ## HITS:1 COG:AGpA470 KEGG:ns NR:ns ## COG: AGpA470 COG0111 # Protein_GI_number: 16119555 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 305 26 333 354 231 40.0 1e-60 MEGKRVVLVTGCDLADQAVNMLRDFDVVYAGRQPTEDQLVTLCEQHNPVAILVRYGRITA RIMDAAPALQVISKHGSGIDVIDQPAAAARDIAVRSAPGANAAAVAEHTWALILACAKSV VTLDKRLRDGYWDKATHKSIELDGMTLGLIGLGAIGSRVAQVGQAFGMQVVAYDPYAKTM PSGCERANTLPDLLSRADVISLHCPLTDDNREMINADTLKYCKRNAILVNTARGGLINDE ALLHALKDGTLHSAALDSFTSEPLTAPHIWQTVDNVIISPHIGGVSAASYIKMGTVAASN ILDVIRVTDGATVSP Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:40:47 2011 Seq name: gi|333596724|gb|GL892088.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD3, whole genome shotgun sequence Length of sequence - 205731 bp Number of predicted genes - 196, with homology - 192 Number of transcription units - 95, operones - 39 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 165 - 241 92.7 # Pro TGG 0 0 - Term 120 - 153 5.4 1 1 Tu 1 . - CDS 333 - 2027 2110 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 2185 - 2244 1.8 - Term 2238 - 2277 4.0 2 2 Op 1 4/0.375 - CDS 2281 - 2754 486 ## COG3539 P pilus assembly protein, pilin FimA 3 2 Op 2 6/0.150 - CDS 2814 - 3881 319 ## COG3539 P pilus assembly protein, pilin FimA 4 2 Op 3 10/0.050 - CDS 3899 - 6427 2881 ## COG3188 P pilus assembly protein, porin PapC 5 2 Op 4 7/0.075 - CDS 6450 - 7154 501 ## COG3121 P pilus assembly protein, chaperone PapD - Term 7174 - 7208 5.2 6 2 Op 5 2/0.700 - CDS 7239 - 7763 548 ## COG3539 P pilus assembly protein, pilin FimA - Prom 7785 - 7844 2.4 - Term 8128 - 8156 2.1 7 3 Tu 1 . - CDS 8175 - 9377 1862 ## COG0477 Permeases of the major facilitator superfamily - Prom 9413 - 9472 2.4 8 4 Tu 1 . - CDS 9614 - 10156 284 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion - Prom 10224 - 10283 4.4 + Prom 10101 - 10160 4.6 9 5 Op 1 5/0.350 + CDS 10317 - 10898 353 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 10 5 Op 2 . + CDS 10876 - 11322 409 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 11379 - 11413 6.0 11 6 Tu 1 . - CDS 11285 - 13564 2216 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 13743 - 13802 4.4 + Prom 13673 - 13732 1.8 12 7 Tu 1 . + CDS 13776 - 14438 195 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 14446 - 14486 3.9 + Prom 14539 - 14598 3.1 13 8 Tu 1 . + CDS 14618 - 15634 1430 ## COG1609 Transcriptional regulators 14 9 Op 1 . + CDS 15752 - 16486 765 ## ECL_00218 xylose isomerase domain-containing protein 15 9 Op 2 4/0.375 + CDS 16490 - 17428 1069 ## COG0524 Sugar kinases, ribokinase family + Prom 17439 - 17498 64.5 16 10 Op 1 3/0.475 + CDS 17540 - 18820 1490 ## COG0477 Permeases of the major facilitator superfamily 17 10 Op 2 . + CDS 18848 - 19822 1179 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 19826 - 19867 3.5 - Term 19814 - 19855 4.4 18 11 Tu 1 . - CDS 19881 - 20093 345 ## COG1278 Cold shock proteins - Prom 20252 - 20311 4.5 - Term 20296 - 20334 4.3 19 12 Tu 1 . - CDS 20335 - 21045 817 ## ECL_00212 putative outer membrane lipoprotein - Prom 21178 - 21237 3.8 + Prom 21295 - 21354 2.7 20 13 Tu 1 . + CDS 21377 - 21664 341 ## COG2944 Predicted transcriptional regulator + Term 21678 - 21707 3.5 - Term 21603 - 21638 -0.1 21 14 Tu 1 . - CDS 21703 - 23322 1638 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 23441 - 23500 4.6 - Term 23504 - 23533 1.2 22 15 Op 1 6/0.150 - CDS 23540 - 24241 798 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 23 15 Op 2 . - CDS 24281 - 25765 1654 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 25791 - 25850 6.0 + Prom 25778 - 25837 3.6 24 16 Tu 1 . + CDS 25947 - 26438 453 ## COG0250 Transcription antiterminator 25 17 Op 1 2/0.700 - CDS 26435 - 27229 762 ## COG0084 Mg-dependent DNase 26 17 Op 2 28/0.000 - CDS 27259 - 28029 865 ## COG0805 Sec-independent protein secretion pathway component TatC 27 17 Op 3 16/0.000 - CDS 28032 - 28574 554 ## COG1826 Sec-independent protein secretion pathway components 28 17 Op 4 6/0.150 - CDS 28578 - 28832 199 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 29 17 Op 5 10/0.050 - CDS 28909 - 30468 1707 ## COG0661 Predicted unusual protein kinase 30 17 Op 6 7/0.075 - CDS 30546 - 31151 510 ## COG3165 Uncharacterized protein conserved in bacteria 31 17 Op 7 5/0.350 - CDS 31165 - 31920 362 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 32 17 Op 8 4/0.375 - CDS 31987 - 33420 1651 ## COG1322 Uncharacterized protein conserved in bacteria - Prom 33469 - 33528 2.7 - Term 33529 - 33570 5.6 33 18 Tu 1 . - CDS 33584 - 34345 1102 ## COG2820 Uridine phosphorylase - Prom 34456 - 34515 4.0 + Prom 34343 - 34402 2.8 34 19 Tu 1 . + CDS 34601 - 35404 918 ## COG0412 Dienelactone hydrolase and related enzymes + Term 35409 - 35457 2.4 - Term 35394 - 35438 0.0 35 20 Op 1 . - CDS 35446 - 36504 813 ## COG2152 Predicted glycosylase 36 20 Op 2 4/0.375 - CDS 36488 - 38071 1099 ## COG0366 Glycosidases 37 20 Op 3 38/0.000 - CDS 38082 - 38909 1029 ## COG0395 ABC-type sugar transport system, permease component 38 20 Op 4 35/0.000 - CDS 38910 - 39776 601 ## COG1175 ABC-type sugar transport systems, permease components 39 20 Op 5 . - CDS 39785 - 40957 947 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 41168 - 41227 6.5 + Prom 41167 - 41226 8.1 40 21 Op 1 1/0.750 + CDS 41261 - 42301 632 ## COG1609 Transcriptional regulators 41 21 Op 2 1/0.750 + CDS 42331 - 43719 1247 ## COG1109 Phosphomannomutase 42 21 Op 3 . + CDS 43716 - 44798 928 ## COG3839 ABC-type sugar transport systems, ATPase components - Term 44777 - 44816 6.6 43 22 Tu 1 . - CDS 44831 - 47092 2817 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 47230 - 47289 6.3 + Prom 47218 - 47277 5.4 44 23 Tu 1 . + CDS 47329 - 48282 827 ## COG0583 Transcriptional regulator 45 24 Op 1 3/0.475 - CDS 48170 - 49069 1126 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 49089 - 49148 2.6 46 24 Op 2 5/0.350 - CDS 49152 - 49952 1117 ## COG0561 Predicted hydrolases of the HAD superfamily 47 24 Op 3 . - CDS 49984 - 50976 855 ## COG2267 Lysophospholipase - Prom 51052 - 51111 2.0 + Prom 51003 - 51062 3.1 48 25 Tu 1 . + CDS 51087 - 51707 843 ## COG1280 Putative threonine efflux protein - Term 51606 - 51639 -0.4 49 26 Tu 1 4/0.375 - CDS 51704 - 52324 859 ## COG1280 Putative threonine efflux protein 50 27 Op 1 5/0.350 - CDS 52386 - 54278 2127 ## COG0514 Superfamily II DNA helicase 51 27 Op 2 . - CDS 54306 - 55175 1101 ## COG2829 Outer membrane phospholipase A - Prom 55285 - 55344 5.0 52 28 Op 1 1/0.750 + CDS 55324 - 55803 552 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 53 28 Op 2 . + CDS 55855 - 56751 1312 ## COG2962 Predicted permeases + Term 56763 - 56801 0.8 54 29 Tu 1 . - CDS 56794 - 57744 1290 ## COG0598 Mg2+ and Co2+ transporters - Prom 57977 - 58036 3.1 - Term 57859 - 57894 -0.7 55 30 Tu 1 5/0.350 - CDS 58101 - 60263 2611 ## COG0210 Superfamily I DNA and RNA helicases 56 31 Op 1 8/0.050 - CDS 60343 - 61059 702 ## COG1011 Predicted hydrolase (HAD superfamily) 57 31 Op 2 10/0.050 - CDS 61059 - 61961 963 ## COG4973 Site-specific recombinase XerC 58 31 Op 3 4/0.375 - CDS 61958 - 62665 827 ## COG3159 Uncharacterized protein conserved in bacteria 59 31 Op 4 1/0.750 - CDS 62662 - 63486 800 ## COG0253 Diaminopimelate epimerase 60 31 Op 5 . - CDS 63522 - 63725 130 ## COG5567 Predicted small periplasmic lipoprotein - Prom 63781 - 63840 3.8 + Prom 63778 - 63837 6.1 61 32 Tu 1 . + CDS 63861 - 64181 492 ## COG1965 Protein implicated in iron transport, frataxin homolog 62 33 Tu 1 . - CDS 64273 - 66738 2907 ## COG3072 Adenylate cyclase - Prom 66958 - 67017 5.2 + Prom 66896 - 66955 3.6 63 34 Op 1 23/0.000 + CDS 67167 - 68108 1117 ## COG0181 Porphobilinogen deaminase 64 34 Op 2 10/0.050 + CDS 68105 - 68845 635 ## COG1587 Uroporphyrinogen-III synthase 65 34 Op 3 11/0.050 + CDS 68866 - 70059 1458 ## COG2959 Uncharacterized enzyme of heme biosynthesis 66 34 Op 4 . + CDS 70062 - 71261 1457 ## COG3071 Uncharacterized enzyme of heme biosynthesis + Term 71268 - 71298 3.0 - TRNA 71799 - 71875 92.7 # Pro TGG 0 0 - TRNA 71920 - 72006 66.6 # Leu CAG 0 0 - TRNA 72028 - 72103 84.9 # His GTG 0 0 + Prom 71864 - 71923 2.8 67 35 Tu 1 . + CDS 72032 - 72298 58 ## - TRNA 72171 - 72247 89.5 # Arg CCG 0 0 68 36 Tu 1 . - CDS 72350 - 73735 1625 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 73817 - 73876 4.8 69 37 Op 1 . - CDS 73934 - 74674 712 ## COG1922 Teichoic acid biosynthesis proteins 70 37 Op 2 . - CDS 74687 - 76039 1692 ## ECL_04993 putative common antigen polymerase 71 37 Op 3 . - CDS 76036 - 77115 1191 ## ECL_04994 4-alpha-L-fucosyltransferase 72 37 Op 4 6/0.150 - CDS 77112 - 78362 1274 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 73 37 Op 5 4/0.375 - CDS 78364 - 79494 1421 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 74 37 Op 6 . - CDS 79499 - 80176 381 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 75 37 Op 7 10/0.050 - CDS 80173 - 81435 1480 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 76 37 Op 8 4/0.375 - CDS 81432 - 82517 1279 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 77 38 Op 1 5/0.350 - CDS 82619 - 83668 1061 ## COG3765 Chain length determinant protein 78 38 Op 2 3/0.475 - CDS 83679 - 84722 814 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Prom 84809 - 84868 4.4 - Term 84975 - 85006 4.1 79 39 Tu 1 . - CDS 85026 - 86285 1483 ## COG1158 Transcription termination factor - Term 86560 - 86612 5.0 80 40 Tu 1 . - CDS 86627 - 86956 460 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 87081 - 87140 4.6 + Prom 86892 - 86951 2.3 81 41 Op 1 4/0.375 + CDS 87101 - 88369 1194 ## COG0513 Superfamily II DNA and RNA helicases 82 41 Op 2 . + CDS 88376 - 89860 1575 ## COG0248 Exopolyphosphatase + Term 89942 - 89981 -0.8 83 42 Tu 1 . - CDS 89912 - 91936 2505 ## COG0210 Superfamily I DNA and RNA helicases - Prom 91976 - 92035 6.5 84 43 Tu 1 . + CDS 92022 - 92303 329 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 92310 - 92345 4.0 - Term 92298 - 92333 4.0 85 44 Op 1 6/0.150 - CDS 92359 - 93180 874 ## COG1045 Serine acetyltransferase 86 44 Op 2 7/0.075 - CDS 93256 - 94275 1084 ## COG0240 Glycerol-3-phosphate dehydrogenase 87 44 Op 3 9/0.050 - CDS 94275 - 94742 507 ## COG1952 Preprotein translocase subunit SecB 88 44 Op 4 7/0.075 - CDS 94773 - 95024 311 ## COG0695 Glutaredoxin and related proteins 89 44 Op 5 . - CDS 95036 - 95467 496 ## COG0607 Rhodanese-related sulfurtransferase - Prom 95507 - 95566 5.1 + Prom 95624 - 95683 4.1 90 45 Op 1 4/0.375 + CDS 95737 - 97260 1771 ## COG0696 Phosphoglyceromutase 91 45 Op 2 3/0.475 + CDS 97270 - 98553 1237 ## COG4942 Membrane-bound metallopeptidase 92 45 Op 3 . + CDS 98599 - 99507 910 ## COG2861 Uncharacterized protein conserved in bacteria 93 45 Op 4 . + CDS 99528 - 100733 895 ## COG0438 Glycosyltransferase 94 45 Op 5 . + CDS 100749 - 101663 993 ## Pvag_3178 hypothetical protein + Term 101668 - 101696 2.1 - Term 101654 - 101682 2.1 95 46 Op 1 9/0.050 - CDS 101690 - 102718 1377 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 96 46 Op 2 . - CDS 102728 - 103924 1583 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes - Prom 104082 - 104141 4.0 + Prom 104032 - 104091 4.3 97 47 Op 1 6/0.150 + CDS 104140 - 105072 1442 ## COG0451 Nucleoside-diphosphate-sugar epimerases 98 47 Op 2 11/0.050 + CDS 105075 - 106121 1118 ## COG0859 ADP-heptose:LPS heptosyltransferase 99 47 Op 3 . + CDS 106125 - 107108 876 ## COG0859 ADP-heptose:LPS heptosyltransferase 100 47 Op 4 . + CDS 107112 - 108221 760 ## ECL_00137 hypothetical protein 101 47 Op 5 4/0.375 + CDS 108227 - 109126 282 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 102 47 Op 6 . + CDS 109174 - 110325 797 ## COG3307 Lipid A core - O-antigen ligase and related enzymes + Term 110330 - 110364 6.0 - Term 110317 - 110351 6.0 103 48 Tu 1 . - CDS 110352 - 111305 767 ## ECL_00134 lipopolysaccharide biosynthesis protein WalW - Prom 111430 - 111489 4.4 + Prom 111256 - 111315 4.8 104 49 Op 1 5/0.350 + CDS 111456 - 112526 768 ## COG0859 ADP-heptose:LPS heptosyltransferase 105 49 Op 2 25/0.000 + CDS 112523 - 113650 668 ## COG0438 Glycosyltransferase 106 49 Op 3 26/0.000 + CDS 113665 - 114753 1026 ## COG0438 Glycosyltransferase 107 49 Op 4 1/0.750 + CDS 114765 - 115754 879 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 108 49 Op 5 1/0.750 + CDS 115820 - 117094 1202 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 109 49 Op 6 1/0.750 + CDS 117094 - 117864 802 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 110 49 Op 7 . + CDS 117868 - 118347 379 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 111 50 Tu 1 5/0.350 - CDS 118350 - 119159 785 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 119172 - 119214 9.0 112 51 Op 1 16/0.000 - CDS 119232 - 119399 280 ## PROTEIN SUPPORTED gi|146309770|ref|YP_001174844.1| 50S ribosomal protein L33 113 51 Op 2 7/0.075 - CDS 119422 - 119658 403 ## PROTEIN SUPPORTED gi|146309769|ref|YP_001174843.1| 50S ribosomal protein L28 - Prom 119798 - 119857 3.3 114 52 Tu 1 . - CDS 119876 - 120541 644 ## COG2003 DNA repair proteins - Prom 120702 - 120761 2.4 + Prom 120624 - 120683 1.9 115 53 Op 1 5/0.350 + CDS 120715 - 121926 1288 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 116 53 Op 2 4/0.375 + CDS 121904 - 122362 560 ## COG0756 dUTPase + Term 122435 - 122471 -0.8 117 54 Tu 1 . + CDS 122485 - 123081 679 ## COG1309 Transcriptional regulator - Term 123070 - 123099 2.1 118 55 Op 1 6/0.150 - CDS 123163 - 123804 892 ## COG0461 Orotate phosphoribosyltransferase - Term 123835 - 123864 0.4 119 55 Op 2 . - CDS 123872 - 124588 826 ## COG0689 RNase PH - Prom 124618 - 124677 5.2 + Prom 124628 - 124687 5.9 120 56 Tu 1 1/0.750 + CDS 124714 - 125577 1118 ## COG1561 Uncharacterized stress-induced protein + Term 125587 - 125625 7.0 121 57 Tu 1 . + CDS 125786 - 126403 688 ## COG2860 Predicted membrane protein 122 58 Op 1 3/0.475 - CDS 126430 - 128607 2357 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 123 58 Op 2 6/0.150 - CDS 128630 - 129073 473 ## COG0394 Protein-tyrosine-phosphatase 124 58 Op 3 . - CDS 129061 - 130194 1217 ## COG1596 Periplasmic protein involved in polysaccharide export 125 58 Op 4 . - CDS 130238 - 132331 2320 ## E2348C_0969 hypothetical protein 126 58 Op 5 . - CDS 132331 - 133068 387 ## SbBS512_E2330 group 4 capsule (G4C) polysaccharide, YmcB 127 58 Op 6 . - CDS 133065 - 133733 458 ## SSON_0993 putative regulator 128 58 Op 7 . - CDS 133825 - 134121 155 ## - Prom 134271 - 134330 3.1 129 59 Tu 1 . - CDS 134828 - 136498 1378 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Prom 136632 - 136691 5.7 + Prom 136651 - 136710 3.9 130 60 Op 1 25/0.000 + CDS 136749 - 137372 508 ## COG0194 Guanylate kinase 131 60 Op 2 18/0.000 + CDS 137427 - 137702 410 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 132 60 Op 3 5/0.350 + CDS 137722 - 139836 2258 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 133 60 Op 4 4/0.375 + CDS 139841 - 140530 770 ## COG0566 rRNA methylases 134 60 Op 5 . + CDS 140534 - 142615 2235 ## COG1200 RecG-like helicase - Term 142532 - 142567 2.2 135 61 Tu 1 . - CDS 142619 - 143821 1586 ## COG0786 Na+/glutamate symporter - Prom 143949 - 144008 1.5 + Prom 143907 - 143966 4.7 136 62 Tu 1 . + CDS 144044 - 145435 1976 ## COG2233 Xanthine/uracil permeases 137 63 Tu 1 . + CDS 145555 - 147249 1848 ## ECL_00105 hypothetical protein - Term 147240 - 147280 3.0 138 64 Op 1 3/0.475 - CDS 147334 - 149652 3203 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 139 64 Op 2 . - CDS 149665 - 151056 2103 ## COG2211 Na+/melibiose symporter and related transporters + TRNA 151344 - 151434 73.2 # SeC(p) TCA 0 0 + Prom 151960 - 152019 2.5 140 65 Tu 1 . + CDS 152069 - 152653 58 ## SeSA_A2909 putative phage-related reverse transcriptase/maturase family protein 141 66 Tu 1 . - CDS 153696 - 153881 57 ## - Prom 153915 - 153974 8.1 142 67 Tu 1 . + CDS 154033 - 154767 10 ## gi|309797846|ref|ZP_07692228.1| conserved hypothetical protein 143 68 Tu 1 . - CDS 155043 - 155225 64 ## Ent638_0068 hypothetical protein - Prom 155368 - 155427 3.7 144 69 Tu 1 . + CDS 155362 - 155703 259 ## ECL_00102 hypothetical protein + Prom 155711 - 155770 1.9 145 70 Tu 1 . + CDS 155807 - 156790 563 ## COG3943 Virulence protein + Term 156946 - 156980 -0.9 146 71 Op 1 . - CDS 156780 - 157235 427 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 147 71 Op 2 . - CDS 157284 - 158273 660 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - Prom 158343 - 158402 5.5 148 72 Op 1 . - CDS 158408 - 158887 353 ## ECL_00096 hypothetical protein 149 72 Op 2 . - CDS 158889 - 159677 269 ## COG3710 DNA-binding winged-HTH domains + Prom 160423 - 160482 6.8 150 73 Op 1 . + CDS 160513 - 161115 293 ## ECL_00094 two-component system, NarL family, response regulator, fimbrial Z 151 73 Op 2 7/0.075 + CDS 161169 - 161753 640 ## COG3539 P pilus assembly protein, pilin FimA 152 73 Op 3 10/0.050 + CDS 161807 - 162484 504 ## COG3121 P pilus assembly protein, chaperone PapD 153 73 Op 4 6/0.150 + CDS 162508 - 165033 2549 ## COG3188 P pilus assembly protein, porin PapC 154 73 Op 5 . + CDS 165024 - 165542 508 ## COG3539 P pilus assembly protein, pilin FimA 155 73 Op 6 . + CDS 165542 - 166549 912 ## ECL_00089 P pilus assembly protein, pilin FimA + Term 166676 - 166715 1.0 156 74 Tu 1 . - CDS 166551 - 167075 671 ## COG3040 Bacterial lipocalin - Prom 167102 - 167161 2.5 157 75 Op 1 . + CDS 167193 - 167918 843 ## COG0789 Predicted transcriptional regulators + Prom 167931 - 167990 3.6 158 75 Op 2 . + CDS 168018 - 168428 601 ## COG2351 Transthyretin-like protein + Prom 168450 - 168509 3.8 159 76 Tu 1 . + CDS 168531 - 169490 993 ## COG1683 Uncharacterized conserved protein + Term 169548 - 169581 1.0 + Prom 169540 - 169599 4.0 160 77 Tu 1 . + CDS 169637 - 170725 1245 ## COG4637 Predicted ATPase - Term 170522 - 170573 1.5 161 78 Op 1 2/0.700 - CDS 170754 - 171707 794 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 162 78 Op 2 . - CDS 171733 - 172512 789 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 172534 - 172593 2.2 163 79 Op 1 . - CDS 172602 - 173852 1210 ## COG0845 Membrane-fusion protein 164 79 Op 2 . - CDS 173859 - 174608 735 ## ECL_00078 hypothetical protein 165 79 Op 3 . - CDS 174605 - 176701 207 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Term 176716 - 176747 2.4 166 80 Op 1 . - CDS 176769 - 176954 335 ## ECL_00076 hypothetical protein 167 80 Op 2 . - CDS 176978 - 177172 329 ## ECL_00075 hypothetical protein 168 80 Op 3 . - CDS 177246 - 177899 358 ## ECL_00074 hypothetical protein 169 80 Op 4 . - CDS 177906 - 179504 1726 ## ECL_00073 hypothetical protein 170 80 Op 5 . - CDS 179482 - 182046 3062 ## ECL_00072 hypothetical protein 171 80 Op 6 . - CDS 182083 - 182760 637 ## ECL_00071 hypothetical protein 172 80 Op 7 . - CDS 182806 - 183429 857 ## ECL_00070 hypothetical protein - Prom 183452 - 183511 5.3 - Term 183591 - 183622 -0.5 173 81 Op 1 . - CDS 183657 - 184127 507 ## ECL_00069 hypothetical protein 174 81 Op 2 . - CDS 184146 - 184958 418 ## ECL_00068 putative transcriptional regulatory protein - Prom 185087 - 185146 8.2 + Prom 185111 - 185170 4.7 175 82 Op 1 . + CDS 185321 - 185917 698 ## ECL_00066 putative fimbrial protein + Term 185929 - 185966 6.2 176 82 Op 2 10/0.050 + CDS 185970 - 186662 487 ## COG3121 P pilus assembly protein, chaperone PapD 177 82 Op 3 . + CDS 186678 - 189170 2634 ## COG3188 P pilus assembly protein, porin PapC 178 82 Op 4 . + CDS 189186 - 190250 958 ## ECL_00063 hypothetical protein + Term 190301 - 190352 -0.8 - Term 190032 - 190064 -1.0 179 83 Tu 1 . - CDS 190257 - 190922 353 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 190994 - 191053 3.3 + Prom 191193 - 191252 6.2 180 84 Op 1 . + CDS 191463 - 192083 401 ## ECL_00060 hypothetical protein + Term 192112 - 192143 2.5 181 84 Op 2 . + CDS 192159 - 192839 426 ## ECL_00059 hypothetical protein + Term 192841 - 192871 5.0 - Term 192732 - 192762 1.3 182 85 Tu 1 . - CDS 192873 - 193805 990 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 193844 - 193903 6.7 + Prom 193804 - 193863 7.1 183 86 Tu 1 . + CDS 194055 - 194528 -69 ## + Term 194556 - 194600 5.5 184 87 Op 1 . - CDS 194597 - 194989 359 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain 185 87 Op 2 . - CDS 194993 - 195253 191 ## Spro_3559 SpoVT/AbrB domain-containing protein - Term 195327 - 195365 -0.9 186 88 Tu 1 . - CDS 195371 - 196870 2109 ## COG0477 Permeases of the major facilitator superfamily - Prom 196898 - 196957 3.6 + Prom 196858 - 196917 6.4 187 89 Tu 1 . + CDS 196949 - 197596 753 ## COG1309 Transcriptional regulator 188 90 Tu 1 . - CDS 197593 - 198012 588 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 198239 - 198298 3.0 + Prom 197913 - 197972 2.9 189 91 Tu 1 . + CDS 198150 - 198446 380 ## ECL_00052 hypothetical protein - Term 198353 - 198392 1.1 190 92 Tu 1 . - CDS 198494 - 199444 1065 ## COG1609 Transcriptional regulators - Prom 199512 - 199571 6.1 + Prom 199637 - 199696 3.7 191 93 Op 1 10/0.050 + CDS 199738 - 200052 293 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 192 93 Op 2 8/0.050 + CDS 200064 - 201389 2009 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 193 93 Op 3 2/0.700 + CDS 201407 - 202783 1709 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 194 93 Op 4 . + CDS 202789 - 203091 366 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 203140 - 203202 6.1 + Prom 203144 - 203203 4.4 195 94 Tu 1 . + CDS 203228 - 204607 2046 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Prom 204660 - 204719 5.3 196 95 Tu 1 . + CDS 204742 - 205647 997 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 205693 - 205721 -1.0 Predicted protein(s) >gi|333596724|gb|GL892088.1| GENE 1 333 - 2027 2110 564 aa, chain - ## HITS:1 COG:yhjW KEGG:ns NR:ns ## COG: yhjW COG2194 # Protein_GI_number: 16131417 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 563 12 573 574 908 75.0 0 MKYIRSLTQQRLCLMLAVYIGLFLNGAVLFRRVEGYFEHLTVRNGIFAAIEVFGSILATF FLLRLLSLFGRRTWQILASLVVIISAAASYYMTFMNVVIGYGIVASVMTTDIDLSKEVVG QGFIMWTILTCLVPLFFIWSNTCRYTLLRQLRTRGQRIRNVAVVLLAGLLVWAPIRLMEK QQKRIEKATGVDMPSYGGVVANSYLPSNWLSALGLYAWAQADESSDVKSLINPTKKFTYQ APADGLDDTYVVFVIGETTRWDHMGLLGYDRDTTPKLAQEKNLVAYRGYSCDTATKLSLR CMFVREGGASDNPQRTLKEQNVFAVLKQLGFSSDLFAMQSEMWFYTNTMADNIAYREQIG AEPRNRGKNVDDMLLLSEMEQSLKNHPKGKHLIVLHTKGSHYSYYQRYTRDFAKWTPECV GINKNCSKQELINAYDNSILYVDTFLSRVIDQLRDKKAIVIYAADHGESINEKEHLHGTP RKLAPPEQFRVPMIMWMSDKYLENPDKAKMFAHLKQQAEIKVPRRHVELYDTIMGCLGYT SPNGGINENNNWCKLPDNTTKAAQ >gi|333596724|gb|GL892088.1| GENE 2 2281 - 2754 486 157 aa, chain - ## HITS:1 COG:STM3636 KEGG:ns NR:ns ## COG: STM3636 COG3539 # Protein_GI_number: 16766922 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 157 19 175 175 258 87.0 2e-69 MAAPTNIGSAGDIHFSIIIKAATCELESDSIDVDMDTVVLQRPIKVGKELNQKSFSIGLK DCAYATKAYVKMDGTPDVTNSSLFALDSGGATGVALKIKTSGGVQQSPSSTDSTPVEHVV WFDGTNKLNYIASYVPVKPDATVGAANATVNFSVEYE >gi|333596724|gb|GL892088.1| GENE 3 2814 - 3881 319 355 aa, chain - ## HITS:1 COG:STM3637 KEGG:ns NR:ns ## COG: STM3637 COG3539 # Protein_GI_number: 16766923 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 355 1 359 359 486 70.0 1e-137 MLKKIMMFAGLLGGTALVSGQALAAADWGPCTPDSTHTYSAVLEKTITDTSKNASGTVFR DFWSWDLGGSYQATCECPPGDAPTTVLFKASSPLPVGHSEGEREYYIINDNIQISADVWI AGHKEEDVSVPFENIDNLTMSRVGCDVDGKDGSWGTGSRGKLSLYINHPFVGEMTIPSTK LLDIFGTTKAGVYSAIPLASVFFSGHIIVPQGCELSSGSTLEIPFGEFKASDFKDRKGQI AKNGTKFTKDLQFKCTNIADGVKIFLRIEGMPNANDSNAIDMGNPDIGAVIEGANGKILV PNDTSVNQELSVTALVDDTHRTASTTISAYPISTTGKLPAAGEFEGIATMRIDVE >gi|333596724|gb|GL892088.1| GENE 4 3899 - 6427 2881 842 aa, chain - ## HITS:1 COG:STM3638 KEGG:ns NR:ns ## COG: STM3638 COG3188 # Protein_GI_number: 16766924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 1 842 1 842 842 1577 94.0 0 MPWTHLPLVNKTPRFPLSALALMIAGTLPVYAGKFNPRFLEDVPGIEQHVDLSMYESSKA EQLPGKYRVSVVVNDKKMESRTLEFKAATEAQRTKMGESLVPCLSRVQLEDMGVRIESFP ALKMAPPEACVAFDDIIPQAASHFDFADQTLIMSFPQAAMRQTARGTVPESQWDEGVNAL LVDYNFTGSNASYDAHDSDSSYSSDSYYLNLRSGVNLGAWRLRNYSTWTRNDGDNRWDNI GTSLSRAIVPLKSQLTLGDTSTSGDIFDSIQMRGAQLTSDEEMLPDSQRGFAPVIRGIAK SSAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKEADGSEQKFVQPFSAVA ILQREGHLKYSLSAGEYRAGNYDSAEPKFWQLDAMYGLPYGFTVYGGSIFSDDYYSLAGG LGKNFGYIGAVSIDVTQAKSNLANDEKSEGQSYRFLYSKSFNSGTDFRLLGYKYSTSGYY TFQEATDVRSDADSSYSQYHKRSQIQGNVTQQLGTWGSVYFNVTQQDYWNDEGKQRSLNA GYNGRIGRVNYSIAYTWTKSPEWDESDRLLSFSMSIPLGRMWSNYHLTTDQHGRTNQQLG VSGAALEDRNLNYSVQEGYGSNGEGNSGSVNLDYQGGVGNASLGYNYNRDGQQVNYGLRG GVIAHSEGITLSQPLGESMAIISAPGARGAHVINNGGVEVDWMGNAVVPYLTPYRETEVS LRSDSLNNQVDLDTASVNVVPTRGAIVRARFDTRVGYRVLMTLTQANGKAVPFGATATLL DTKKESSSIVGEDGQLYISGMPEKGALQVNWGKDQAQQCRVAFTLPEQQENTGVVMANAV CR >gi|333596724|gb|GL892088.1| GENE 5 6450 - 7154 501 234 aa, chain - ## HITS:1 COG:STM3639 KEGG:ns NR:ns ## COG: STM3639 COG3121 # Protein_GI_number: 16766925 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 1 234 1 232 232 411 94.0 1e-115 MNRSRLISCAALALALALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQ SWIDDANGNKKTPFIITPPLFKLNPTKNNVLRIVNTSNALPQDRESVYWVNVKAIPAKSE NAEDKNVLQIAVRTRLKLFYRPAGLKGNSMDGWSKLKFTSAGANQIKVENPSAFNLTFNK FYANGRNIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN >gi|333596724|gb|GL892088.1| GENE 6 7239 - 7763 548 174 aa, chain - ## HITS:1 COG:STM3640 KEGG:ns NR:ns ## COG: STM3640 COG3539 # Protein_GI_number: 16766926 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 174 5 178 178 249 87.0 1e-66 MKKVVFALSALAVVSTSAFAADSGDGTVKFTGEIVDSPCVVSTDSQNQEVVLGQVKKTVF KAVGDKSVSKPFQIKLEDCDISSKTKVNVNFTGVADADDAKLVSVSTEAGAASGVGIGIY DNANKLVDMNSGKSTTTLSAGQTVLYYTANYVATKAAVTTGYGNAEVDFNLSYE >gi|333596724|gb|GL892088.1| GENE 7 8175 - 9377 1862 400 aa, chain - ## HITS:1 COG:ECs4432 KEGG:ns NR:ns ## COG: ECs4432 COG0477 # Protein_GI_number: 15833686 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 399 1 399 400 616 89.0 1e-176 MNESTYNRTRWLTLFGTIVTQFALGSVYTWSLFNSALSDKLGAPISQVAFSFGLLSLGLA ISSSVAGKLQERFGVKRVTMASGILLGVGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLL TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDAHLLASVGLEKTFMIWGVIVLVMIL FGATLMKDAPQQEVKTVNGVVENDFTLAQSMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQGMVKLDAATAANAVTVISIANLSGRLVLGILSDKIARIRVITLGQVISLVGMAALLFA PLNEATFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSLIA SLFGGFYVTFCVIFALLIISLALSTTIRQPQREVLSEAHA >gi|333596724|gb|GL892088.1| GENE 8 9614 - 10156 284 180 aa, chain - ## HITS:1 COG:STM3641 KEGG:ns NR:ns ## COG: STM3641 COG5571 # Protein_GI_number: 16766927 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Salmonella typhimurium LT2 # 15 168 15 170 234 177 56.0 8e-45 MMLKKISGRHAASGLVGVSACLLLCNTAFAWQQEYIVSDAQNNTTERYTWDADHQPRYED ILAERINRSQNAAGFALNDPSGLDAETVLSVGWNFPVAGHFTTGPVMAWRTDGTPPAPVN AFGDTTTTQSLTDPLWHASVNSLGWRVDTQYGDLHPWAKISYNQQSEEEYLYTLGLSAKF >gi|333596724|gb|GL892088.1| GENE 9 10317 - 10898 353 193 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 181 1 181 185 140 37 4e-32 MQRCGWVSQDQLYIDYHDKEWGVPETDGKKLFEMICLEGQQAGLSWITVLKKRENYRKAF HQFDPVAVAAMTEDDVERLVLDTGIIRHRGKIQAIIGNARAYLAMAQNGEPFSAFVWSFV DNEPKVTQAATLAEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHITGCF CHPEGHNDPQMAK >gi|333596724|gb|GL892088.1| GENE 10 10876 - 11322 409 148 aa, chain + ## HITS:1 COG:STM3643 KEGG:ns NR:ns ## COG: STM3643 COG0454 # Protein_GI_number: 16766929 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 146 1 146 146 200 69.0 9e-52 MILKWQSENTAPLLRLWLESTTEAHPFIDASYWQANEAVVRDDYLPAAETWVWEENGTLC GFISVMQFQFVGALFVAPAFIGKGIGRALLKHVQQHYPYLTLEVYQKNVRAVNFYHAQGF RIEDSAWQDDTQHPTWIMSWQADQTPSA >gi|333596724|gb|GL892088.1| GENE 11 11285 - 13564 2216 759 aa, chain - ## HITS:1 COG:STM3644 KEGG:ns NR:ns ## COG: STM3644 COG0243 # Protein_GI_number: 16766930 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 3 759 21 777 777 1335 84.0 0 MLVETDGDTVLSSRGALPSRHHNSLQTVVRDQVHSKTRVRWPMVRKGFLASPDKPQGIRG QDEFVRVSWDDALALIHTQHKRIRDSYGPSSIFAGSYGWRSNGVLHKAATLLQRYMSLAG GYTGHLGDYSTGAAQAIMPYVVGGNEVYQQQTSWPLVLEHTEVVVLWSANPLNTLKIAWN ASDEQGVSYFDALRKSGKRIICIDPMHSETLDFFSDSAEWIAPHMGTDVAMMLGVAHTLV ENGWHDAEFLARCTTGFDKFADYLTGQTDGIAKTAEWAAAICGVEAVKIRELAALFHSHV TMLMSGWGMQRQQFGEQKHWMLVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRKAAVLAS MQGSVQGGVDAVDKIPVARIVEALENPGGFYQHNGQDRHFPDIKFVWWAGGANFTHHQDT NRLIRAWQKPELVVISECFWTASAKHADIVLPATTSFERNDLTMTGDYSNQHMVPMKRVV APRDEARDDFDVFADLSEMWEAGGRERFTEGKTDLQWLETFYQIASQRGAAQGVTLPPFA EFWEANQLFEMPESEQNARFVRFADFRRDPENHPLKTESGKIVIYSERIASYGYADCPPH PAWLEPDEWHGNAQPGQLQLLSAHPAHRLHSQLNYSALREQYAVADREPIALNSDDAKAR GINHGDLVRVWNARGQVLAGAVVSDGIRPGVFCIHQGAWPDLALEEGGICKNGAVNVLTK DLPSSKLGNGCAGNTALAWVEKYQGPALTLTAFDPPASS >gi|333596724|gb|GL892088.1| GENE 12 13776 - 14438 195 220 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 113 214 243 344 347 79 33 9e-14 MKKRVLVIAALVSGALAVSGCTTNPYTGEREAGKSGIGAGIGSLVGAGVGALSSSKKDRG KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMKGTGVSVTRSGDNIILNMPNNVTFDSSS ATLKPAGANTLTGVAMVLKEYNKTAVNVIGYTDSTGSHDLNMRLSQQRADSVASSLITQG VEANRIRTSGMGPANPIASNSTAEGKAQNRRVEITLSPVQ >gi|333596724|gb|GL892088.1| GENE 13 14618 - 15634 1430 338 aa, chain + ## HITS:1 COG:PA2259 KEGG:ns NR:ns ## COG: PA2259 COG1609 # Protein_GI_number: 15597455 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 6 336 11 336 340 284 46.0 2e-76 MSKPTRATISDVAKAAKTGKTSISRYLNGEKHLLSDALLARIEQAIADLDYRPSLMARGL KRGRTRLIGLIIADITNPYSVNVLSGIEAACREKGFTPLVCNTNNEVDQELHYLDLLRSY QVEGIVVNAVGMREEGLNRLQQSSLPMVLIDRKIPEFACDVVGLDNTQAATTATEHLIEQ GFEAILFLSEPLGMVNTRRDRLAAFRATLARYPGVIAENAEIPLHEAEQLDNTLRQFHTR HRGMRKAVISANGALTLQVARSLKRIGLHWGSDIGLLGFDELEWAELAGVGITTLKQPTW QIGYAAVEQVVRRIEGTRDAVREQVFSGELIVRGSTAR >gi|333596724|gb|GL892088.1| GENE 14 15752 - 16486 765 244 aa, chain + ## HITS:1 COG:no KEGG:ECL_00218 NR:ns ## KEGG: ECL_00218 # Name: not_defined # Def: xylose isomerase domain-containing protein # Organism: E.cloacae # Pathway: not_defined # 1 244 6 249 249 425 91.0 1e-118 MVVTAAYGADQVRQAGGQRAMLPVIAGAGADGVEIRRELFNSDELMALPALGESIELLGL LACYSAPAPLFMPDGALNPDLPRYLSEASALNALWLKVSLGHFSDKQPPEALRALLDESG MTLVVENDQTDCGQLAPMQRFKAACRVMALPVTLTFDMGNWLWVGDSPEEAARQLAPAVS YIHVKAAVPHKAQFRAVAPDQADSRWRDLLNQLPADAPRGIEFPLEGTDLTAVTRHYVNL LREE >gi|333596724|gb|GL892088.1| GENE 15 16490 - 17428 1069 312 aa, chain + ## HITS:1 COG:PA2261 KEGG:ns NR:ns ## COG: PA2261 COG0524 # Protein_GI_number: 15597457 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 5 312 4 309 316 325 56.0 8e-89 MHKTLDVITIGEAMAMFVATETGELSTVEHFIKRVAGAELNVATGLARLGLNVGWVSRVG NDSFGHFVLDSLKKEGIDAEGVTLDGRFPTGFQLKSKVENGTDPIVEYFRKGSAASHLSV DDYHAAYFSSARHLHLSGVAAALSASSYDLLDHAASAMKAQGKTISFDPNLRPVLWKSEA EMVEKLNRLAFQADWVLPGVKEGMILTGESTPEGIADFYLNRGVKAVVLKTGADGAWFKT ADGEQGAVAAVKVDNVVDTVGAGDGFAVGVISALLEGKPLSQAVTRGNKIGSLAIQVQGD SEGLPTRAQLND >gi|333596724|gb|GL892088.1| GENE 16 17540 - 18820 1490 426 aa, chain + ## HITS:1 COG:PA2262 KEGG:ns NR:ns ## COG: PA2262 COG0477 # Protein_GI_number: 15597458 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 7 420 7 419 435 548 70.0 1e-156 MNSSTNAVKRWWYIMPIVFITYSLAYLDRANFSFASAAGINEDLGITKGVSSLLGALFFL GYFFFQIPGAIYAERRSVRKLIFICLILWGACASLTGVVNNIPALAAIRFILGVVEAAVM PAMLIYISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYLIQSFGWREMFIIEGVPAII WAFCWWVLVKDKPAQAKWLSEDEKAALQAQLDKEQQGLKAVRNYGEAFRSRNVILLCAQY FTWSIGVYGFVLWLPSIIRSGGENLGMVEVGWLSSVPYLAATIAMIIVSWASDKLQNRKL FVWPLLLIAAFAFIGSWAVGANHFWASYTLLVIAGAAMYAPYGPFFAIIPEMLPRNVAGG AMALINSMGALGSFFGSWFVGYLNGATGSPSASYIFMGVALFASVWLTLIVKPANNQQLP VGARHA >gi|333596724|gb|GL892088.1| GENE 17 18848 - 19822 1179 324 aa, chain + ## HITS:1 COG:ECs4438 KEGG:ns NR:ns ## COG: ECs4438 COG1052 # Protein_GI_number: 15833692 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 322 5 326 328 546 84.0 1e-155 MKPSVILYKALPDDLQKRLEEHFTVTRVKNLSPETVAQHADAFASAEGLLGSSEKVDAAL LEKMPKLRATSTVSVGYDNFDVDALNARNILLMHTPHALTETVADTLMALVLSTARRVVD VAERVKAGEWTKSIGPDWFGVDVHGKTLGIVGMGRIGLALAQRAHFGFNMPILYNARRHH SEAEERFNARYCELDTLLQEADFVCLILPLTDETRHLIGKSAFEKMKKSAIFINAGRGPV VDEKALIEALQNGEIHAAGLDVFEQEPLPVDSPLLTMPNVVALPHIGSATHETRYNMAAT AVDNLIAALGGKVDKNCVNPQIQH >gi|333596724|gb|GL892088.1| GENE 18 19881 - 20093 345 70 aa, chain - ## HITS:1 COG:ECs4441 KEGG:ns NR:ns ## COG: ECs4441 COG1278 # Protein_GI_number: 15833695 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 120 95.0 5e-28 MSAKMTGLVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK GPAAGNVVSL >gi|333596724|gb|GL892088.1| GENE 19 20335 - 21045 817 236 aa, chain - ## HITS:1 COG:no KEGG:ECL_00212 NR:ns ## KEGG: ECL_00212 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: E.cloacae # Pathway: not_defined # 1 236 1 236 236 404 96.0 1e-111 MATGKSCSRWFAPIAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK KQFGPFVSDYAILYGYSQQVSQAMDSGIRPVVDSVNAIRVPQDYLTQREPLRQSNGALGV LSQQLQNAKMQADASRSALKQGEDLKPVYDQVYEKVVTKPSNALQPLIPAAQVFTQQLVQ VGDFISEQGTQVSFVSNGIQFPTSQQASQYNALIGPLASQHQAFSQAWSAAVAATE >gi|333596724|gb|GL892088.1| GENE 20 21377 - 21664 341 95 aa, chain + ## HITS:1 COG:STM3648 KEGG:ns NR:ns ## COG: STM3648 COG2944 # Protein_GI_number: 16766934 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 94 1 94 96 127 79.0 6e-30 MELKDPEFELLSSLEQIIFKDVPPTVTLNQKSNPFSEFERLRKGSGLKTDEFARAMGVSV AMVLEWESKREKPTPAELKLMRLIQANPDLRKQLA >gi|333596724|gb|GL892088.1| GENE 21 21703 - 23322 1638 539 aa, chain - ## HITS:1 COG:PA1425 KEGG:ns NR:ns ## COG: PA1425 COG0488 # Protein_GI_number: 15596622 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Pseudomonas aeruginosa # 7 537 4 536 538 340 42.0 4e-93 MAHFAQSPSFILHQVTCQFATGDILFGPLNLSLDASVCALVGRNGSGKTRLLRLLAGVDE PASGHIERFGTHVYVAQQQDISADTTLAGLLGYDAIFAARTRIDSGHYEPDDLDTLDGYW DLAERLSHAFIAAKLPPFDPNKLAAELSGGERIRALLCGAFAADADYLLLDEPTNHLDRQ GRMWFYEQLSRYQGGVLVASHDRELLAQVPRILELSALGLHSYGGNYADYRTQRDAEQQA ARAALEHAATERKRTRARMHKEHDDSQRRSAKTLRTVDSLNIASFERVKYKGAAKERIGS WKKQHSDQNHALNAAVNQARERVEEDNAVMFTLPGSQIPEGKQVLVLEELVLPHVPVPPI NWRMDGPMRVALRGPNGCGKSTLLKVILGETAPVTGSCKVSVRRAYLDQHLSRLDLSQSV MTHLSLCNTPLEEGALRTRLAQLQLGAEKVTLPLAELSGGERLKAALACVLWREAATQLL LLDEPTNHLDLASVQAIEAALADFPGALLVVSHDEAFLAGLKLTHELIWEESGWRCESL >gi|333596724|gb|GL892088.1| GENE 22 23540 - 24241 798 233 aa, chain - ## HITS:1 COG:STM3979 KEGG:ns NR:ns ## COG: STM3979 COG0543 # Protein_GI_number: 16767249 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 233 1 233 233 446 93.0 1e-125 MTTLSCKVTSVDAITDTVYRVRLVPEAAFSFRAGQYLMVVMDERDKRPFSMASTPAEQEF IELHIGASELNLYAMAVMDRILKEREIVVDIPHGEAWLREDEDRPLILIAGGTGFSYVRS ILLTALARNPNRDITIYWGGREEKHLYDLSELEALSVNHPNLRIEPVVEQPEEGWRGRSG TVLTAVLQDHGTLAGHDIYIAGRFEMAKIARDLFCNERDAREDRLFGDAFAFI >gi|333596724|gb|GL892088.1| GENE 23 24281 - 25765 1654 494 aa, chain - ## HITS:1 COG:ECs4771 KEGG:ns NR:ns ## COG: ECs4771 COG0043 # Protein_GI_number: 15834025 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 493 4 496 497 978 93.0 0 MKYHDLRDFLALLEKQGELKRITLPVDPYLEMTEIADRTLRAGGPALLFENPKGYTMPVL CNLFGTPRRVALGMGQEDVTALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTK RLRGAPCQQKVLEGDAVDLTKIPIMQCWPEDAAPLITWGLTVTHGPHKERQNLGIYRQQL IGKNKLIMRWLSHRGGALDFQEWCEAHPGERFPVSVALGADPATILGAVTPVPDTLSEYA FAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYLEQGELAPEGPYGDHTGYYNEVDNFPV FTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSY RLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDP ARDTVIVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETDREWGRPIKKDPAVTARIDA IWDELAIMNNGKAE >gi|333596724|gb|GL892088.1| GENE 24 25947 - 26438 453 163 aa, chain + ## HITS:1 COG:STM3977 KEGG:ns NR:ns ## COG: STM3977 COG0250 # Protein_GI_number: 16767247 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Salmonella typhimurium LT2 # 1 163 1 162 162 288 85.0 3e-78 MQAWYLLYCKRGQLQRAQEHLERQSVNCLTPVITLEKMQRGRRTTVSEPLFPNYLFVEFD PEVIHTTTISATRGVSHFVRFGAHPARVPSSVIHQLSVYQQPDDITDPETPYAGDSVVIT EGAFEGLQAIFAEPDGEARSMLLLNLLNKEVLQSVKNTDFRKV >gi|333596724|gb|GL892088.1| GENE 25 26435 - 27229 762 264 aa, chain - ## HITS:1 COG:ZtatD KEGG:ns NR:ns ## COG: ZtatD COG0084 # Protein_GI_number: 15804431 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 EDL933 # 1 264 1 264 264 424 75.0 1e-119 MGKRMFDIGLNLTSSQFAKDRDEVVARAFAAGVNGLLLTGTSLHESAQAQQLAQRYQHCW STAGVHPHDSSQWTQDSAETLYRLADTPEVVAIGECGLDFNRNFSTPEEQEKAFTAQLAL AAEREMPVFMHCRDAHERFLALLEPWLEKLPGAVLHCFTGSRQEALDCLDRGLYLGITGW VCDERRGLELRALLPVIPADRLLLETDAPYLLPRDMQPKPPSRRNEPAYLGHIAERVAHW RGEDAQWLAAQTDDNVRRLFGVQF >gi|333596724|gb|GL892088.1| GENE 26 27259 - 28029 865 256 aa, chain - ## HITS:1 COG:ECs4768 KEGG:ns NR:ns ## COG: ECs4768 COG0805 # Protein_GI_number: 15834022 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Escherichia coli O157:H7 # 1 255 1 255 258 413 87.0 1e-115 MAVDDTQPLITHLIELRKRLLNCIIAVFLIFLCLVYFANDIYQVVSAPLIKQMPLGATMI ATDVASPFFTPIKLTFWVSLIASAPVILYQVWAFVAPALYRHERKLVIPLLVSSSLLFYI GMAFAYFVVFPLAFGFLTHTAPEGVQVSTDIASYLSFVMALFMAFGVAFEVPVAIVLLCW VGVTTPEDLRKKRPYILVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEVGVFFARFYVGKG RTRDEEDEPSEETTKE >gi|333596724|gb|GL892088.1| GENE 27 28032 - 28574 554 180 aa, chain - ## HITS:1 COG:STM3974 KEGG:ns NR:ns ## COG: STM3974 COG1826 # Protein_GI_number: 16767244 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Salmonella typhimurium LT2 # 1 179 1 181 182 206 78.0 2e-53 MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVVGWVRALRSLATTVQNELAQELKLQEFQ DSLKKVEKASMDNLTPELKASMDELREAAESMKRSYSINDPEKASDEANTIHNPVVKGSE EQREGVTPSSAEHQAASPEQTPQEPEVKKQVPPEEPVVKAAEVKPAAPVSESSPSSSDKA >gi|333596724|gb|GL892088.1| GENE 28 28578 - 28832 199 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 77 3 83 83 81 56 3e-14 MGGISIWQLVIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDENKQEKASQDADFT AKSIADKQDEAKKEEAKRHDKEQV >gi|333596724|gb|GL892088.1| GENE 29 28909 - 30468 1707 519 aa, chain - ## HITS:1 COG:ECs4765 KEGG:ns NR:ns ## COG: ECs4765 COG0661 # Protein_GI_number: 15834019 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Escherichia coli O157:H7 # 1 519 28 546 546 957 88.0 0 MRITLPLRLWRRTLFWMPNRHKDQELGARLRLALQELGPVWIKFGQMLSTRRDLFPPQIA DQLALLQDRVAPFDGERAKKQIEEAMGNIPIETWFDDFDIQPLASASIAQVHTARLKENG KEVVIKVIRPDILPVIRADMKLIYRLARWVPRLLPDGRRLRPLEVVREYEKTLIDELNLL RESANAIQLRRNFEDSPMLYVPEVYSDYCSQNMMVMERIYGIPVSDVVALEKQGTNMKLL AERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPKYIGIDCGIVGSLNKEDKRYLAE NFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLSEISFGHVLLNL FNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALV RSLKEKGPFWIEKMPEIPELVYDSLRQSKNLQHSMDKIAHELQSSRVRQGQSRYLFGIGA TLLISGTLLLINRPDWEMMPTWIMAAGVVVWLAGWRKTR >gi|333596724|gb|GL892088.1| GENE 30 30546 - 31151 510 201 aa, chain - ## HITS:1 COG:yigP KEGG:ns NR:ns ## COG: yigP COG3165 # Protein_GI_number: 16131683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 201 1 201 201 311 81.0 4e-85 MPIKPLVTAGIENVLNAFLYRAPALKTARQRLNGKVLRIVLKEFSTPLVLVFSERQLDVL GEWEGEADCSVITHMSVLPKLRDRQQMTALIRSGELEVEGDIQVVQNFVALSDQAEFDPA ELLAPYIGDIAAEGISKTLRTGSAFLRKGLLRQQRYAAEVLTEEWRMAPGPLEVAWFAEE TAAVERAVDALTKRLEKLEGK >gi|333596724|gb|GL892088.1| GENE 31 31165 - 31920 362 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 144 34 4e-33 MVDDSQDTTHFGFQTVAKAQKADMVAHVFHSVAAKYDVMNDLMSFGIHRLWKRFTIDCSG VRRGQTVLDLAGGTGDLTAKFSRLVGETGRVVLADINDSMLKMGREKLRNIGVVGNVEYV QANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIDPLS KAYDAYSFHVLPRIGELVANDAESYRYLAESIRMHPDQDTLKAMMQDAEFENVEYFNMTA GVVALHRGYKF >gi|333596724|gb|GL892088.1| GENE 32 31987 - 33420 1651 477 aa, chain - ## HITS:1 COG:ECs4762 KEGG:ns NR:ns ## COG: ECs4762 COG1322 # Protein_GI_number: 15834016 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 2 445 10 453 475 710 90.0 0 MVIALVSVGMGWLIASYQHAQQKAEQLAEREEIVAELSATKQQLALSDHWRDECELLNNE LRNLRDINTSLEADLREVTTRLESTQLHAEDKIRQMINSEQRLSEQFENLANRIFEHSNR RVDEQNRQSLNSLLTPLREQLDGFRRQVQDSFGQEARERHTLAHEIRNLQQLNAQMAQEA VNLTRALKGDNKAQGNWGEVVMTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRSL DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA QQIADRASKLYDKMRLFVDDMSSVGQSLDRAQDNYRQAMKKLSSGRGNLLAQAEAFRSLG VEVKREINPELVEQATAQDEEFRLREGDAEQKTRNEDNDLAASLSPESQPARFFHGS >gi|333596724|gb|GL892088.1| GENE 33 33584 - 34345 1102 253 aa, chain - ## HITS:1 COG:udp KEGG:ns NR:ns ## COG: udp COG2820 # Protein_GI_number: 16131680 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Escherichia coli K12 # 1 253 1 253 253 469 96.0 1e-132 MSKSDVFHLGLTKNDLQGATLAIVPGDPERVEKIAALMDKPVKLAAHREFTTWRAELDGK AVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGAS LHFAPMEFPAVADFECTTALVEAAKSVGATTHVGVTASSDTFYPGQERYDTFSGRVVSRF KGSMEEWQSMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESH AVKIVVEAARRLI >gi|333596724|gb|GL892088.1| GENE 34 34601 - 35404 918 267 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 2 267 26 291 293 471 83.0 1e-133 MTEKTGFAPAAAPHASTIVSTSEEAITAGETSIPSQGENMPAYHARPKSADGPLPIVIVV QEIFGVHEHIRDICRRLALEGYLAVAPELYFRQGDPNDYSDIPTLFSNLVSKVPDAQVLA DLDHVASWAARNGGDPHRLMVTGFCWGGRISWLYAAHNPQLKAAVAWYGKLVGEKTLNSP KHPVDIATDLNAPVLGLYGGQDTGIPLDTVETMRHALRAANATAEIVVYPDAGHAFNADY RPSYHAESAKDGWQRMLAWFSQYGGKK >gi|333596724|gb|GL892088.1| GENE 35 35446 - 36504 813 352 aa, chain - ## HITS:1 COG:YPO2474 KEGG:ns NR:ns ## COG: YPO2474 COG2152 # Protein_GI_number: 16122695 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted glycosylase # Organism: Yersinia pestis # 1 351 1 351 351 478 62.0 1e-135 MKRHGNNPLITPGDVVPSLPGRKVECVFNAGVTEYHGEIILLLRVAESVINDDPQKIVVP LLVQQPGGWQPATKTFDRNDPRYDFSDPRTIVLKSDPAQVWLTSMSHLRLARSRDGVNFT IDEQPFITADSRYEEFGCEDARITLIDDVWYINYSAVSSLGISTALATTVDFVSVEKKGL IFCPDNRDVCFFPEKVGGAYRALTRPAPCHFGHPEIWICESPDMLHWGNHRHLLGRSGDE WDALKSGGGAPLIKTARGWLEIYHGVDASQRYCLGALLLDPEDPLTLIAKSSVPLLEPSA PYEREGFFGNVVFTCGALVRNDTLHIWYGAADECIALATLPMDDLWKHLGLN >gi|333596724|gb|GL892088.1| GENE 36 36488 - 38071 1099 527 aa, chain - ## HITS:1 COG:lin0855 KEGG:ns NR:ns ## COG: lin0855 COG0366 # Protein_GI_number: 16799929 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Listeria innocua # 6 474 3 460 510 416 45.0 1e-116 MKKQPWWQACTCYQIYLPSFCDGNGDGLGDFPGLLSKVDYLGALGIGAIWITPFYPSPLV DNGYDISDYCAVDPRFGTLDDFRDVVHRCHEKGIRVIIDLVLNHVSSQHPWFQDAWNNPA SRYRDYFIFSAHPNNWESFFSGSAWSQEPDTGMFYYHKFAPEQVDLNWANPAVEQEMFQV IDFWQGLGVDGFRFDVINFLSTRGIGPDNPAKAGVQQHEHDVNQPGLIGTLQRLCQHARQ QRDVFLIGEIGSEEREILARYQAPSLMDVVFNFNIGSQKTFDAARLCDEINATLAMQSGL PTLFFSSHDMPRMISRFGEGPHDTARALAVLALQLTVRGVPFIFQGEELGMPDYVPQTVE QIFDIQGKTYYDTAMRQGCSAADALAQAIEHSRDGSRGPFLWRDAPFAGFSTRTPWMPVS QDYPFLNAEHQLSTPGSLWREYQTFIALRAAIGALQHGECSPLTRHKECVWFTRTTPQEQ VWVAVNFGQPVQNPLWAIEADVLYGQNAPQLDKNQILIKRSVYEETR >gi|333596724|gb|GL892088.1| GENE 37 38082 - 38909 1029 275 aa, chain - ## HITS:1 COG:YPO2475 KEGG:ns NR:ns ## COG: YPO2475 COG0395 # Protein_GI_number: 16122696 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 8 275 7 274 274 344 69.0 1e-94 MKKLTPLSLLIHALMFILALSWLYPFVWMVVSSLKPTAQIYTTDLFSGTLTLENYTFLFD NSNRADKPFLRTLFNSLFVSATVTASVTVTSMLVGYALAKTEFRGKNAFRNLLIVQMVFP VFMFIIPQFVLMRELGLINRYSAMILPYAMSAWGIFMVSQSFKGTPNDYLYAARLDHASL WAILRHVMMPLNKSILAIVALFTFSSSWDNFLWPLIVMRDADKMPFSVLLATFSKSYGVY LGPVMAGAVVQMLPVIVLFILFRKYFLQGMSLSLK >gi|333596724|gb|GL892088.1| GENE 38 38910 - 39776 601 288 aa, chain - ## HITS:1 COG:YPO2476 KEGG:ns NR:ns ## COG: YPO2476 COG1175 # Protein_GI_number: 16122697 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 5 288 8 291 291 333 61.0 2e-91 MAGYESRTGGLLASTWIGYSLLFWFYPLAWLMVLSVTRWQFIGMPQFTGLQNIIGVLHDA LFWTSMWNICRFLMWYIPIVFITALLFAAGLRRINFGRGFIALSFLLANISSGVAYSIVF SRLFNEYGPINRLLSAWFGISVPWFTNPDCAMLSIALIVTWKFVGYYGLILYSGMQAIPA DIYSAAILDKTGRFQKGWAITLPMMNPQIVMVMVLAITVAFSIFTEPYLITGGGPLNSTT SPMVVMYEAAFQNMKPTWAAAMSIIVAACSFLMIWLFRRLFEKHIEIV >gi|333596724|gb|GL892088.1| GENE 39 39785 - 40957 947 390 aa, chain - ## HITS:1 COG:YPO2477 KEGG:ns NR:ns ## COG: YPO2477 COG1653 # Protein_GI_number: 16122698 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 387 40 425 428 451 53.0 1e-126 MWVTPTVNEEAFWSKIVAEWNKDPAHMPVEFTAIPAANSSEEAIMNALASGTEPDISTNI FIGFASQLVDVGQIEDLSKMPGFQETIQKRQMTSLLPAWELNGKQTVLPVYINPIVWWWR GDLLKRYGFDRVPVRYDELYALAKRRAADNHGYVIQLTAGKNWWERWFDFIPLFYAQSQG KPYLIDKKPALTTPAGEAVLTFMANVFNNKWSSYDFTSAEDPLATGQVIASARGPWDLAR YRKQYPDILKTIQIGPMLTEKGIEHPYTFGDSKGLVIFSSSKRKAQAWQFMKWVFSNPEH DRLWLELTGMPPARADLMSNPIFVSYFKQNPLEKQIASWVDVALPPAATNQTTEVQRSMT QMLERVIFKTSTPADALKQSQQEINALAGQ >gi|333596724|gb|GL892088.1| GENE 40 41261 - 42301 632 346 aa, chain + ## HITS:1 COG:YPO2478 KEGG:ns NR:ns ## COG: YPO2478 COG1609 # Protein_GI_number: 16122699 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 11 346 6 346 346 280 43.0 4e-75 MPKSFSKIKNKKVTIKSLAAEMGISHTTVSNAWNNPEKLSVELRERILGHARQVGFQGPD KLARALRTGKSGAIGVIFNDAMSYVFIDPHDVSLMRGVATRCEDRNINLVLIPLQKGPSS LTTLVDGYILNATHNSAAIIQQTLARNLPVVTLDFQLPQFSSVSVDNMRAMHDIATLLIQ KGHRHFGIIAFPSHPNARGIRPLTHPITGDNHLMLTRVNACRDAFLQHGIALSNCWLCET HHDEPHGEQAAEALLTAHPDITALICLSDRFAIGAVNYCQRQRLAIPGRVAITGFDNTAR RLNGPGLTTVAQNAERKGEIAVDLLLNTGPVTHVVLEHQLIERDTA >gi|333596724|gb|GL892088.1| GENE 41 42331 - 43719 1247 462 aa, chain + ## HITS:1 COG:STM2104 KEGG:ns NR:ns ## COG: STM2104 COG1109 # Protein_GI_number: 16765434 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Salmonella typhimurium LT2 # 1 453 1 455 456 539 58.0 1e-153 MDELTCFKTYDIRGDVGVNLTPDIARRIGRAYAVWLHPRRVVVGADVRLSSEALKTALID GLTAGGVDVIDLGMTGTEEVYFATRELRADGGIQVTASHNPAHYNGFKLVGLEARPISND NGLLEIKALAEQNRFPPCVRRGGIFPYDNRPAWVNCLLRFLTTPPKRTLRLVVNAGHGTA GPALDALDEGLKRAGVPVEFIRIHHQPDGRFPAGVPNPMLPENRQSTRLAVIEHHADAGI AWDGDFDRCFFFDERGNYVENYYLVGLFAEHFLRRYPGSRVILDPRLIWNTLDVVAHCGG NAIVSKTGHAFIKARMRKEDAIYGGEMSGHHYFRDFNYCDSGMIPLILMLQILGAAAQPL SHWVRHAQARYPVSGEINLTVNDPAALLHDVAAHYAPAADGRDDCDGLSLAFADWRFNLR ASNTEPLVRLNVETRGDAALLVHKTHEVLMLISALQAAKETL >gi|333596724|gb|GL892088.1| GENE 42 43716 - 44798 928 360 aa, chain + ## HITS:1 COG:YPO2480 KEGG:ns NR:ns ## COG: YPO2480 COG3839 # Protein_GI_number: 16122701 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 353 1 355 359 372 56.0 1e-103 MTSLSLRHIHKKYDKNVIVADLSLEIASGEFIVLVGPSGCGKSTLLRMIAGLETPDSGML MMGDEDVTHLAAGKRSLSMVFQSYALYPHMTVRENLAFGLRNIRTPEACIAQRISHAAAM LRLDELLDRLPQQLSGGQRQRVAIGRSIVQQPALFLFDEPLSNLDAALRVEMRQEIQQLH TTLKNTMIYVTHDQVEAMTLADRIVVMCKGNIEQTGTPLELYNAPANRFVAEFIGTPKIN MLPAVWQQGALHIDSDTVFPLSRQPAGIQEGAPVFVAIRPEHLRYQQPGDFSLTGKTRLC ELQGDSTLVWLDVAGHAVCLKSFQQLSLPPQQRITLTVQEAHLHLFDAAGQRIALSENAA >gi|333596724|gb|GL892088.1| GENE 43 44831 - 47092 2817 753 aa, chain - ## HITS:1 COG:metE KEGG:ns NR:ns ## COG: metE COG0620 # Protein_GI_number: 16131678 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Escherichia coli K12 # 1 753 1 753 753 1465 94.0 0 MTIRTHTLGFPRVGLRRELKKAQESYWAGNATREELLAVGRELRARHWDQQKQAGVDLLP VGDFAWYDHVLTTSLLLGNVPARHQNSDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFVKGQQFKLNWTQLLDEVDEALALGHQVKPVLLGPVTYLWLGKVKGEQFDR LSLLNDILPVYRQVLIELGKRGIQWVQIDEPALVLELPQAWLDAFKPAYDALTGQVKLLL TTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVTELHKRLPAEWLLSAGLVNGRNVWRAD LTEKYAQIKDIVGKRELWVASSCSLLHSPIDLSVETRLDPEVKSWFAFALQKCEELALLR DALNSGDTAAISDWSAPIQARRHSTRVHNPAVEKRLAAITARDSQRHSPYEVRAEAQRAR FNLPAWPTTTIGSFPQTTEIRGLRLDFKKGNLDANHYRTGIAEHIRQAIVEQERLGLDVL VHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPVVIGDVSRPEPITVEWAKYA QSLTDKPVKGMLTGPVTILCWSFPREDVSRETIARQIALALRDEVADLEAAGIGIIQIDE PALREGLPLRRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDAD VITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAQRIPAERL WVNPDCGLKTRGWPETRAALANMVQAAQNLRQA >gi|333596724|gb|GL892088.1| GENE 44 47329 - 48282 827 317 aa, chain + ## HITS:1 COG:ECs4758 KEGG:ns NR:ns ## COG: ECs4758 COG0583 # Protein_GI_number: 15834012 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 314 1 314 317 577 92.0 1e-164 MIEIKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP QGEILLQLANQVLPQIASALQSCNEPQQTTLRIAIECHSCIQWLTPALENFRQKWPQVEM DFKSGVTFDPQPSLQQGELDLVMTSDILPRSGLHYSPMFDFEVRLVLAPDHPLAAKTRIT PEDLATETLLIYPVQRSRLDIWRHFLQPAGISPQLKSVDNTLLLIQMVAARMGIAALPHW VVETVERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPITEAFIRSARNHACDHLPFVRSAE RPSGDVPTVKPGSPIPQ >gi|333596724|gb|GL892088.1| GENE 45 48170 - 49069 1126 299 aa, chain - ## HITS:1 COG:ECs4757 KEGG:ns NR:ns ## COG: ECs4757 COG0697 # Protein_GI_number: 15834011 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 455 81.0 1e-128 MALLIITTILWAFSFSLIGEYLAGSVDSYFSVLMRVGLAALVFLPFLRTRGQSLKTILLY MLVGAMQLGIMYLFSFRAYVYLSVSEFLLFTVLTPLYITLIYDLLSKRRLRWGYLLSAAL AVIGAAIIRYDKVSDHFWTGLMFVQLANISFAIGMVGYKRLMETRPMPQHNAFAWFYMGA AIVAVAAWFMLGNPQKLPTTTVQWSVLVWLGVVASGLGYFMWNYGATQVDAGTLGIMNNV HVPAGLLVNLAIWQEQPHWPSFLIGGSVILASLWVHRRWVAPRSAQTEDGRTRGSALSE >gi|333596724|gb|GL892088.1| GENE 46 49152 - 49952 1117 266 aa, chain - ## HITS:1 COG:Z5347 KEGG:ns NR:ns ## COG: Z5347 COG0561 # Protein_GI_number: 15804418 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 265 40 304 305 518 90.0 1e-147 MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGVNFVFATGRHHVDVGQIRDNLEIKS YMITSNGARVHDTDGNLIFTHNLDRDIATDLFGIVHSNPDIVTNVYRDDEWFMNRHRPDE MRFFKEAVFQYSLYEPGLLDPEGISKVFFTCESHEALLPLEQAINARWGDRVNVSFSTLT CLEVMAGGVSKGHALEAVAKRLGFDLKDCIAFGDGMNDAEMLSMAGKGCIMQNAHQRLKD LHPELEVIGTNGDNAVPKYLRKLFLE >gi|333596724|gb|GL892088.1| GENE 47 49984 - 50976 855 330 aa, chain - ## HITS:1 COG:STM3961 KEGG:ns NR:ns ## COG: STM3961 COG2267 # Protein_GI_number: 16767231 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Salmonella typhimurium LT2 # 1 330 1 330 338 603 85.0 1e-172 MFQQKKDWETRENAFAAFSMGPLTDFWRQREEDEFMGVGDIPVRFVRFRDEKNDRVIVVC PGRIESYIKYAELAYDLFHLGFDVLIIDHRGQGLSGRMLPDTHRGHVDNFSDYVDDLAAF WQQEVQPGPWRKRYILAHSMGGAISTLFLQRHQHQCDAIALTAPMYGIVIRFPDWMVRHL LDWAEGHQRIREGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADEPRLRVGGPTWHW VREGIHAGEQVLAGVGDDDTPTLLIQAEEERVVDNRMHDRYCELRAAAGHPCEGGKPLVI NGAYHEILFEKDAMRSVALNAIVEFFNRHN >gi|333596724|gb|GL892088.1| GENE 48 51087 - 51707 843 206 aa, chain + ## HITS:1 COG:ECs4754 KEGG:ns NR:ns ## COG: ECs4754 COG1280 # Protein_GI_number: 15834008 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 330 89.0 1e-90 MTFEWWFAYLLTSIILSLSPGSGAINTMTTSINHGYRGAAASIAGLQTGLGIHIVLVGIG LGTLFSRSVLAFEVLKWAGAAYLIWLGIQQWRAAGSIDLHTLSRTQTRGHLFKRAVFVNL TNPKSIVFLAALFPQFIVPHQPQVMQYVVLGATTIIVDIIVMIGYATLAQRIAAWIKGPK QMKALNKVFGSLFMLVGALLASARHA >gi|333596724|gb|GL892088.1| GENE 49 51704 - 52324 859 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 323 87.0 2e-88 MLMLFLTVALVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITMGVMVWAAVALLGL NLILAKMAWLHNIIMVGGGLYLCWMGYQMLRGALKKEEKKPEEPKVELATGGRSFVKGLL TNLANPKAIIYFGSVFSLFVGDNVGAGARWGIFLLIVVETFAWFTVVASLFALPAMRRGY QRIAKWIDGFAGALFAGFGIHLIISR >gi|333596724|gb|GL892088.1| GENE 50 52386 - 54278 2127 630 aa, chain - ## HITS:1 COG:STM3958 KEGG:ns NR:ns ## COG: STM3958 COG0514 # Protein_GI_number: 16767228 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Salmonella typhimurium LT2 # 19 630 4 615 615 1170 92.0 0 MKFLSQALKIAPVSFLAYGVNVAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLE GRDCLVVMPTGGGKSLCYQVPALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQ TREQQQEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFR PEYAALGQLRQRFPELPFMALTATADDTTRLDIVRLLGLNDPYIQVSSFDRPNIRYMLME KFKPLDQLLRYVQEQRGKSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQ EKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLF YDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGN CDICLDPPKQYDGLMDARKALSTIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYG IGKDQSHEHWVSIIRQLIHLGFATQNIAQHSALQLTEAARPVLRGEVELKLAVPRVVALK PRVMQKSYGGNYDRKLFAKLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLS VNGVGTRKLERFGKEFMALIRSHADGDDEE >gi|333596724|gb|GL892088.1| GENE 51 54306 - 55175 1101 289 aa, chain - ## HITS:1 COG:ECs4751 KEGG:ns NR:ns ## COG: ECs4751 COG2829 # Protein_GI_number: 15834005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 521 89.0 1e-148 MRTYLGWLLAAVALPLTAYAQEATIKEVHDKPAVKGSIIANMLQEHDNPFTLYPYDTNYV IYTQTSDLNKEAISSYNWSDNARKDEVKFQLSLAFPFWRGILGPNSVLGASYTQKSWWQL SNSGESSPFRETNYEPQLFLGFATDYEFAGWTLRDVEVGYNHDSNGRSDPTSRSLNRVYT RLMAQNGNFMVEVKPWYVVGSTDDNPDITKYMGYYQLKVGYQLGDAVLSAKGQYNWNTGY GGAELGLSYPVTKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDIF >gi|333596724|gb|GL892088.1| GENE 52 55324 - 55803 552 159 aa, chain + ## HITS:1 COG:STM3956 KEGG:ns NR:ns ## COG: STM3956 COG2050 # Protein_GI_number: 16767226 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Salmonella typhimurium LT2 # 5 159 7 161 161 285 92.0 3e-77 MPRQMSATLTAEETLKLVGEIFVYHMPFNRALGLELERYEKDFAQLSFNNQPMMVGNWAQ SILHGGVIASALDVAAGLVCVGSTLTRHDTINEDELRQRLSRMGTIDLRVDYLRPGRGNR FTCTSSLLRAGNKVAVARVELHNEEQVYIASATATYMVG >gi|333596724|gb|GL892088.1| GENE 53 55855 - 56751 1312 298 aa, chain + ## HITS:1 COG:STM3955 KEGG:ns NR:ns ## COG: STM3955 COG2962 # Protein_GI_number: 16767225 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 293 1 293 294 475 92.0 1e-134 MDAKQTRQGVLLALAAYFIWGIAPAYFKLIAYVPADEILTHRVIWSFFFMIALMSISRQW SGVKTLLKTPKKVFLLALSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIF LGERFRRMQWVAVILAFCGVLVQLWTFGSLPVIALGLAFSFAFYGLVRKKIAVEAQTGML FETLWLLPVAAIYLFGIADSATSHMGSNPWSLNLMLMAAGVVTTIPLLCFTGAATRLRLS TLGFFQYIGPTLMFLLAVVFYGEVPGADKMVTFAFIWVALAIFVADAIYTQRRTRRGM >gi|333596724|gb|GL892088.1| GENE 54 56794 - 57744 1290 316 aa, chain - ## HITS:1 COG:ECs4746 KEGG:ns NR:ns ## COG: ECs4746 COG0598 # Protein_GI_number: 15834000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 597 97.0 1e-170 MLSAFQLENNRLTRLEAEESQPLIDAVWVDLVEPDDDERLRVQSELGQSLATRPELEDIE ASARFFEDEDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRAR SQAMMDGNAYELLLDLFETKIEQLADEIENIYSDLEKLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIIFMI LAGLAPYLYFKRKNWL >gi|333596724|gb|GL892088.1| GENE 55 58101 - 60263 2611 720 aa, chain - ## HITS:1 COG:uvrD KEGG:ns NR:ns ## COG: uvrD COG0210 # Protein_GI_number: 16131665 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 720 1 720 720 1393 96.0 0 MDVSYLLDSLNDKQRDAVAASRTNLLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSFGNPVEQTWQNVYKAYQEA CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN NGRLGKKLWTDGVDGEPISIYCAFNELDEARFVVNRIKTWQENGGALEQCAILYRSNAQS RVLEEALLQVSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD RTLDVVRQASRDRQLTLWQACRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQRMG SPISETDTGYKLGQRVRHSKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLESV >gi|333596724|gb|GL892088.1| GENE 56 60343 - 61059 702 238 aa, chain - ## HITS:1 COG:ECs4742 KEGG:ns NR:ns ## COG: ECs4742 COG1011 # Protein_GI_number: 15833996 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 411 81.0 1e-115 MRFYRPLGQISALTFDLDDTLYDNRPVILRTEQESLAFVQNYHPALKTMQNKDFQKLRQS LRETEPDIYHDVTEWRRRAVEQAMRNAGLSAQDAATGAEAAMENFAKWRSRIDVPQETHD TLAKLAEKWPLVAITNGNAQPELFGLGNYFQFVLRAGPHGRSKPFNDMYHLAAEKLDLPL GEILHVGDDLTTDVAGAIRCGMQACWIKPENADLMITPDSRLLPHVEISRLASLTTLI >gi|333596724|gb|GL892088.1| GENE 57 61059 - 61961 963 300 aa, chain - ## HITS:1 COG:STM3949 KEGG:ns NR:ns ## COG: STM3949 COG4973 # Protein_GI_number: 16767219 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Salmonella typhimurium LT2 # 1 300 1 300 300 550 91.0 1e-156 MTDGLLATDVTRFLRYLGVERQLSPITLLNYQRQLDAIMQIADEIGLKSWQQCDAATVRG FVVRSRKKNLSPASLALRLSALRSFFDWLVSQGNLKANPAKGIATPKAPRHLPKNIDVDD VNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVNLDVKHLDLETGEVWVMGKGSKERR LPIGRNAVSWIEHWLDLRGLFGTDEEALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVH PHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >gi|333596724|gb|GL892088.1| GENE 58 61958 - 62665 827 235 aa, chain - ## HITS:1 COG:yigA KEGG:ns NR:ns ## COG: yigA COG3159 # Protein_GI_number: 16131662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 235 1 235 235 371 81.0 1e-103 MKQPGEELREVVTELDDSAVVDYLLHNPEFFIRNARVVERMRVPHPVRETVSLVEWHMAR SRNHIHQLEENMTLLMEQASNNESLFYRLLHLQARLASAHSLDEFLNRFHRWARELGLAG ATIRLFPDRWRIGAPSGFTHLALSRQAFEPLRIQRLGHEHHYLGPLNGPELLVVLPEAKA IGSVAMSLMGRDGDLGVMLFTSRDAHHYEQGQGTQLLQEIALMLPELLERWIERV >gi|333596724|gb|GL892088.1| GENE 59 62662 - 63486 800 274 aa, chain - ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 552 96.0 1e-157 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHVGVGFDQLLVVEPPYDPDLDFHY RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTDDELVRVNMGE PNFEPSAVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVQTAAVETLGPVLE SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGISQGLLAEEVRV ELPGGRLDIAWKGAGHPLYMTGPATHVYDGFIHL >gi|333596724|gb|GL892088.1| GENE 60 63522 - 63725 130 67 aa, chain - ## HITS:1 COG:STM3946 KEGG:ns NR:ns ## COG: STM3946 COG5567 # Protein_GI_number: 16767216 # Func_class: N Cell motility # Function: Predicted small periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 66 1 66 67 89 75.0 2e-18 MKNVFRTLAVLVTLFSLTGCGLKGPLYFPPEDKNAPPPTKPVQSGIESSTPDTNDRGNNG GPTQVNL >gi|333596724|gb|GL892088.1| GENE 61 63861 - 64181 492 106 aa, chain + ## HITS:1 COG:STM3943 KEGG:ns NR:ns ## COG: STM3943 COG1965 # Protein_GI_number: 16767214 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 192 92.0 2e-49 MNDSEFHRLADTLWMTIEERIDDWDGDSDIDCEINGGILTLSFENGSKIIINRQEPLHQV WLAAKQGGYHFDLKGDEWVCDRSGETFWDLLEQAATAQAGEAVSFR >gi|333596724|gb|GL892088.1| GENE 62 64273 - 66738 2907 821 aa, chain - ## HITS:1 COG:STM3939 KEGG:ns NR:ns ## COG: STM3939 COG3072 # Protein_GI_number: 16767210 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Salmonella typhimurium LT2 # 1 821 27 848 848 1637 94.0 0 MGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPQGICLFTPDETQQHYLTELELYRGMPPQ VSPKGELPITGVYSMGSTSSVGQSCSSDLDIWVCHQSWLDNEERQLLQRKCSLLESWAAS LGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCD EEENYDDYVMSLYSQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTL LLEAYSWEYPTPRLLAKDIKQRLHDGEIVSYGLDAYCMMLERVTEYLTAIEDATRLDLVR RCFYLKVCEKLSRERACVGWRREVVSQLVKEWGWDEERLAMLDNRANWKIDQVREAHNEL LDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSE PNLTFIYVPPGRANRTGWYLYNRAPSMDSIISHQPLEYNRYLNKLVAWAWFNGLLTSRTR LFIKGNEVVDLAKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF RNQVVHFDFRKLDVFSFGEQQNCLVGSVDLLYRNSWNEVRTLHFNGEQAMIEALKTILGK MHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVSGQTW GLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPQVVDGFASEGIIQFFF EESGDNAGFNIYILDETNRAEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGSSFINFNLP QFYQIVNVDGRAQVIPFRTQAITPVAPANQDTAPLLQQYFS >gi|333596724|gb|GL892088.1| GENE 63 67167 - 68108 1117 313 aa, chain + ## HITS:1 COG:ECs4735 KEGG:ns NR:ns ## COG: ECs4735 COG0181 # Protein_GI_number: 15833989 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Escherichia coli O157:H7 # 1 313 8 320 320 533 88.0 1e-151 MLDNVLRIATRQSPLALWQAHYVKQRLEACHTGLRVELVPMVTRGDVILDTPLAKVGGKG LFVKELELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYDSLDALP AGSVVGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLE ERIRVALPPELSLPAVGQGAVGIECRLDDARTQALLAPLNHDDTAVRVKAERAMNTRLEG GCQVPIGSYAELTGDELWLRALVGAPDGSQMVRGERRGKPQDAEALGVSLAEELLNNGAR EILAEVYNGEPPA >gi|333596724|gb|GL892088.1| GENE 64 68105 - 68845 635 246 aa, chain + ## HITS:1 COG:STM3937 KEGG:ns NR:ns ## COG: STM3937 COG1587 # Protein_GI_number: 16767208 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 406 84.0 1e-113 MSILVTRPSPAGEQLVSSLRALGQVAWSFPLIEFSPGRELPTLADQMRLLQEGDLLFALS QHAVEFAHAQLQQQGVTWPHAPRYFAIGRTTALALHTASGIDVRYPLDREISEVLLQLPE LQTIAGKRALILRGNGGRELLGETLRERGADVTFVECYQRCAKHYDGAEEAMRWHARGIN TLVVTSGEMLQQLWSLIPLWYRENWLLRCRLLVVSERLANHARELGWQDIRIADNADNDA LLRALQ >gi|333596724|gb|GL892088.1| GENE 65 68866 - 70059 1458 397 aa, chain + ## HITS:1 COG:ECs4733 KEGG:ns NR:ns ## COG: ECs4733 COG2959 # Protein_GI_number: 15833987 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 1 374 1 369 399 477 80.0 1e-134 MTEHEKSSAVVEETRETVDTTSQPETTDTTVEKKNGSNKTSLTLSVIAIAIALAAGVGLY GLVKKQGTNQTATSDALVNQITALQKAQETQKAELEGVIKQQAAALADANSKREELTKQL SEVQEKVATISGTDAKTWLLSQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDP SLINARRAITEDIASLSAVSQVDYDGIILKVNQLSNQIDNLQLADNNDDDSPMDSDGTEL SSSLSEWRINLQKSWQNFMDSFITIRRRDETAVPLLAPNQDVYLRENIRSRLLVAAQAVP RHQEETYKQALDNVSTWVRAYYDTNDATTTAFLEDIDKLSQQNITMNVPDKLESQPILEK IMQTRVRNLLAQPGVPAERPAEAPAAAPAPESAPQGE >gi|333596724|gb|GL892088.1| GENE 66 70062 - 71261 1457 399 aa, chain + ## HITS:1 COG:ECs4732 KEGG:ns NR:ns ## COG: ECs4732 COG3071 # Protein_GI_number: 15833986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 12 398 12 398 398 657 88.0 0 MLKVFLLFILLIAGIVLGPMLAGHQGYVLIQTDNYNIETSVTGLVIILILGVVVLLAVEW LLRRIFRTGVHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADHAEQPVVN YLLAAEAAQQRGDEARANQHLERASELSTKDPIPVEITRVRLQLARNENHAARHGVDRLL EITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRLAWIGLMDQAR ADLGSDGLKTWWKNQSRKTRQQVPLQVAMAEHLIECDDHDTAQEILLDGLKRQYDDRLVM VIPRLKTNNPEQIEKALRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD AFDYAWLADSLDKQHKPEEAAAMRRDGLLLTLQNNGTQQ >gi|333596724|gb|GL892088.1| GENE 67 72032 - 72298 58 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MANGIRTHDNWNHNPGLYQLSYSHHCILSRGSDYFSDHRSSSAGTKMARPTGFEPETSAS GGQRSIQLSYGRLAPLRGWILRTSAPAV >gi|333596724|gb|GL892088.1| GENE 68 72350 - 73735 1625 461 aa, chain - ## HITS:1 COG:STM3930 KEGG:ns NR:ns ## COG: STM3930 COG1113 # Protein_GI_number: 16767205 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 461 1 461 461 762 93.0 0 MAEKKPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIM RSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP EMAQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVVGLGVIFFGFGNGG HAIGFGNLTGHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAAIINFVVLTAALSGCN SGMYSCGRMLYALAQNRQLPAVMGKVSRVGVPVAGVAVSIAILLIGSCLNYIIPNPQRVF VYVYSASVLPGMVPWFVILISQLRFRQAHKKAIASHPFRSILFPYANYLTMAFLICVLIG MYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRRGSAHKVEE >gi|333596724|gb|GL892088.1| GENE 69 73934 - 74674 712 246 aa, chain - ## HITS:1 COG:STM3929 KEGG:ns NR:ns ## COG: STM3929 COG1922 # Protein_GI_number: 16767204 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Salmonella typhimurium LT2 # 1 246 1 246 246 412 80.0 1e-115 MTDTTSAPRYALRGLQLIGWRDMQHALDFLFADGQMKSGTLVAINAEKMLAVEDNAEVKS LIEAAEFKYADGISVVRSIRKKFPDANVSRVAGADLWERLMERAGAEGTPVFLIGGKPEV LAQTEQKLRSQWNVNIVGSQDGYFRPEDRQGLYERVRDSGAKIVTVAMGSPRQEILMRDC RRVSPDALYMGVGGTYDVFTGHVKRAPRVWQNLGLEWLYRLLSQPTRIKRQIRLLRYLAW HYTGKL >gi|333596724|gb|GL892088.1| GENE 70 74687 - 76039 1692 450 aa, chain - ## HITS:1 COG:no KEGG:ECL_04993 NR:ns ## KEGG: ECL_04993 # Name: not_defined # Def: putative common antigen polymerase # Organism: E.cloacae # Pathway: not_defined # 1 450 1 450 450 678 94.0 0 MSQLQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSILVFR FDVGVAPPDILLQALLSATCFYAVYYVTYKTRLRAAKDTAPRRPLFTMNRVETHLTWVML MTIALVSVAIFFMHNGFLLFKLQSYSQIFSAEVSGVALKRFFYFFIPAMLVVFFLRQDSK AWLFFLVSTVAFGILTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVFGIVGM FWLALKRYGLNVAGDEAFYTFLYLTRDTFSPWENLALLLQNYDKIEFQGLAPIVRDFYVF IPTWLWPDRPGIVLNTANYFTWEVLNNHSGLAISPTLIGSLVVMGGTWFILPGAIAVGLI IKWFDWLYTLGNEETNRYKAAVLHSFCFGAIFNMIVLAREGLDSFVSRVVFFMVVFGLCL LLAKLLYWLFDSAGLVHRREPQGSTSLSQV >gi|333596724|gb|GL892088.1| GENE 71 76036 - 77115 1191 359 aa, chain - ## HITS:1 COG:no KEGG:ECL_04994 NR:ns ## KEGG: ECL_04994 # Name: not_defined # Def: 4-alpha-L-fucosyltransferase # Organism: E.cloacae # Pathway: not_defined # 1 359 1 359 359 665 89.0 0 MTALIHILGSDIPHHNQTVLRFFNDELASGTPDAREFMVVGRDNGLSAACPALHITFWPD KAALTKAVVAKAKADRSQRFFFHGQFNTGLWLALLSGGIKPSQFSWHIWGADLYEVSRGW KFRLFYPLRRLAQARVGCVFATRGDLTYFAKQHPKVRGELLYFPTRMDPALNTLANDAVR EGKLTILVGNSGDRSNEHVAALRAVHQQFGDTVNVVVPMGYPANNDAYIDEVRQQGLALF SAENLHILSDKLEFDDYLALLRKCDLGYFIFARQQGIGTLCLLIQAGVPCVLNRENPFWQ DMAEQHIPVLFTSDTLNVEVVREAQRQLTLVDKNSIDFFSPNYLTPWHRALRIASGDNA >gi|333596724|gb|GL892088.1| GENE 72 77112 - 78362 1274 416 aa, chain - ## HITS:1 COG:wzxE KEGG:ns NR:ns ## COG: wzxE COG2244 # Protein_GI_number: 16131648 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 416 1 416 416 618 85.0 1e-177 MSLAKASVWTAASTLVKIGAGLLVVKLLAVSFGPSGVGLAGNFRQLVTVLGVLAGAGIFN GVTKYVAQHHDDAEKLRTVVGTSSAMVLGFSTLLAFVFLLAAAPVSQGLFGHTHYQGLVR LVALVQMGIAWANLLLALMKGFRDAAGNALALILGSIIGVIAYYVCYRLGGYEGALLGLA LVPALVVIPAAFMMIRRGDVPLSYLKPQWDKMLAGQLAKFTLMALITSITIPVAYVMMRN LLAAHYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTSRQDITREIFRSLRFV LPAVAVASFTVWLLRDVAIWLLFSAKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL RLYILAEISQFALLTAFSHWLIPTHGALGAAQAYMATYIVYFAACCGVFLLWRKRA >gi|333596724|gb|GL892088.1| GENE 73 78364 - 79494 1421 376 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 376 1 376 376 730 90.0 0 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWMEQRFNSAKVLLTPSCTASLE MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKT RAIVPVHYAGVACEMDTIMAIANKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET KNYTAGGEGGATLINDRALVERAEVIREKGTNRSQFFRGQVDKYTWRDIGSSYLMADLQA AYLWAQLEAAERINLQRLSLWQTYYDALEPLAKAGRIELPTLPADCVHNAHMFYIKLRDN DDRSKLIAWLKEAEIMAVFHYIPLHSSPAGEAFGMFAGEDRYTTKESERLLRLPLFYNLA PVNQRTVINSLLSYFA >gi|333596724|gb|GL892088.1| GENE 74 79499 - 80176 381 225 aa, chain - ## HITS:1 COG:wecD KEGG:ns NR:ns ## COG: wecD COG0454 # Protein_GI_number: 16131646 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 45 225 1 181 181 233 68.0 2e-61 MSNLNGVLESLEWESAFFARPSAIVRLRDNAPALQEADFSAWPRIQAKIPADRSDLLDAL QQHGFRLVEGEVDLSITVTRHASPGAESASEQDIPALRKMAALAFAQSRFRTPWYAPDDS GRFYAQWIENAVKGTFDHVCLVFRAAGGQIQGFVSLRRLNEHEARIGLLAGRGMGEKLMQ AALHWAEQQKVSTLRVATQMGNTAALKRYIASGASIDATAYWLYR >gi|333596724|gb|GL892088.1| GENE 75 80173 - 81435 1480 420 aa, chain - ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 771 89.0 0 MSFTTISVVGLGYIGLPTAAAFASRQKQVVGVDINAHAVETINRGEIHIVEPDLDRVVKK AVDGGFLRASTTPVEADAYLIAVPTPFKGDHEPDMVYVEAAAKSIAPVLKKGALVILEST SPVGATEQMAQWLAEARPDLSFPQQAGEQADINIAYCPERVLPGQVMVELIKNDRVIGGM TPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPEQARLIRTAREVNDHKPHWVI NQVKATVADCLAASGKRASELKIACFGLAFKPNIDDLRESPAMEIAEMIATWHSGETLVV EPNIHALPTKLAGHCTLTALDDALATADVLVLLVDHNAFKAVSGDAVRQQYVVDTKGVWR >gi|333596724|gb|GL892088.1| GENE 76 81432 - 82517 1279 361 aa, chain - ## HITS:1 COG:STM3920 KEGG:ns NR:ns ## COG: STM3920 COG0381 # Protein_GI_number: 16767195 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Salmonella typhimurium LT2 # 1 361 16 376 376 651 87.0 0 MAPLVHALARDPDIEAKVCVTAQHREMLDQVLTLFSIVPDYDLNIMKPGQGLTEITCRIL QELKPILESFKPDVVLVHGDTTTTVATSLAAFYQRIPVGHIEAGLRTGNLYSPWPEEANR TLTGHLAMYHFAPTENSRQNLLRENISDSKIFVTGNTVIDALIWVRDRVLANSELQAELA ARYPFLNNGKKTILVTGHRRESFGRGFEQICHALAEIAAQNEDVQIVYPVHLNPNVSEPV NRILGHVENVLLIEPQDYLPFVWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRETTERPE AVTAGTVRLVGTDPRRIVEEVTRLLHDDEEYQAMSRAHNPYGDGQACGRILHALKHNRVT L >gi|333596724|gb|GL892088.1| GENE 77 82619 - 83668 1061 349 aa, chain - ## HITS:1 COG:STM3919 KEGG:ns NR:ns ## COG: STM3919 COG3765 # Protein_GI_number: 16767194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Salmonella typhimurium LT2 # 2 348 1 347 348 605 87.0 1e-173 MMTQPLAGAKSVGTENELDIRGLFRVLWQGKLWIVGIALGFALLALAYTFFAKQEWSATA ITDRPTVNMLGGYYSQQQFLRNLDIKANLATPDQASVMDESYKEFVMQLASWDTRRDFWS QTDYYKQRMVGNSKADAALLDDLINNIQFMPGDVLRNVSDSVKLIAETAPDANNLLRQYV AFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIFARRVHNIEQALKIAEQHNI SRSETDVPADELPDSEMFLLGRPMLQARLENIQAVGPDFDLDYDQNRAMLNTLNVGPTLD PRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGALTGAGVALMRRRTN >gi|333596724|gb|GL892088.1| GENE 78 83679 - 84722 814 347 aa, chain - ## HITS:1 COG:ECs4717 KEGG:ns NR:ns ## COG: ECs4717 COG0472 # Protein_GI_number: 15833971 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Escherichia coli O157:H7 # 4 347 24 367 367 550 88.0 1e-156 MFIARKVAKRIGLVDKPNFRKRHQGLIPLVGGISVYAGICFTFGIADYYIPHAALYLACA GVLVLVGALDDRFDISVKFRATVQAAIGIIMMVVGGLYLRSLGYVFGPWELVLGPFGFFL TLFAVWAAINAFNMVDGIDGLLGGLSSVSFGAIGIILWFDGQYSLSMWCFAMIAAILPYI CLNLGVLGRRYKVFMGDAGSTLIGFTVIWVLLETTQGKTHPISPVTALWIIAIPLMDMVA IMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITLAAAILAAIGVAAEYAHFIPE WVMLVLFLLAFFMYGYCIKRAWKVARFIKRLKRRMRRNSGKNTTLTK >gi|333596724|gb|GL892088.1| GENE 79 85026 - 86285 1483 419 aa, chain - ## HITS:1 COG:STM3917 KEGG:ns NR:ns ## COG: STM3917 COG1158 # Protein_GI_number: 16767192 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Salmonella typhimurium LT2 # 1 419 1 419 419 810 99.0 0 MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS >gi|333596724|gb|GL892088.1| GENE 80 86627 - 86956 460 109 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 109 19 127 127 217 98.0 4e-57 MSDKIIHLTDDSFDTDVLKADGLILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN IDQNPGTAPKYGIRGIPTLLLFKNGDVAATKVGALSKGQLKEFLDANLA >gi|333596724|gb|GL892088.1| GENE 81 87101 - 88369 1194 422 aa, chain + ## HITS:1 COG:rhlB KEGG:ns NR:ns ## COG: rhlB COG0513 # Protein_GI_number: 16131636 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 422 1 421 421 834 96.0 0 MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA CEEYALNLPAIETYIGHSIPQSKYNPDALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR SG >gi|333596724|gb|GL892088.1| GENE 82 88376 - 89860 1575 494 aa, chain + ## HITS:1 COG:STM3913 KEGG:ns NR:ns ## COG: STM3913 COG0248 # Protein_GI_number: 16767189 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Salmonella typhimurium LT2 # 2 494 1 493 493 841 87.0 0 MLSSTSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLSSDNHLSPEAMERG WQCLRLFAERLQDIPLSQIRVVATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLI YQGVAHTTGGDDRRLVVDIGGASTELVTGTGAQATSLFSLSMGCVTWLERYFTDRNLAKE NFDEAENAAREVLRPVMDELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLAKLQQLK QRAIQCGRLEELEIEGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGML HQSVDQDIRSRTLRNVQRRFIVDTDQAHRVSQLASLFADQVKKSWDIEPLSRDLLLSACA LHEIGLSVEYKQAPLHAAWLVRNLDLPGYTPAQKKLLATLLLNQTNAVDLSSLHQQNAVP PRVAEHLCRLLRLAILFASRRRDDLLPAITLVADDEKLTLTLPENWLENHPLGAELVEQE FQWQSYVHWALEVK >gi|333596724|gb|GL892088.1| GENE 83 89912 - 91936 2505 674 aa, chain - ## HITS:1 COG:STM3912 KEGG:ns NR:ns ## COG: STM3912 COG0210 # Protein_GI_number: 16767188 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 673 1 673 674 1270 94.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKSNFSLFDDTDQVALLKEL TEGLIEDDKVLLQQLISTISNWKNDLMTPAQAAASAKGERDRIFAHCYGLYDAHMKACNV LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVV GDDDQSIYSWRGARPQNLVQLSKDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTEYKDYAILYRGNHQSRVFEK MLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGSATLQK LGEWAMTRNKSLFTASFDMGLSQTLTGRGYDALTRFTHWLGEVQRLAEREPVAAVRDLIH GIDYESWLYETSASPKAAEMRMKNVNQLFSWMTEMLEGSEIDEPMTLTQVVTRFTLRDMM ERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVITAEERMHKGQANV ANIRAMLAKAKEKG >gi|333596724|gb|GL892088.1| GENE 84 92022 - 92303 329 93 aa, chain + ## HITS:1 COG:ECs4709 KEGG:ns NR:ns ## COG: ECs4709 COG0760 # Protein_GI_number: 15833963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 93 1 93 93 186 98.0 1e-47 MAKTAAALHILVKEEKLAQDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP AFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN >gi|333596724|gb|GL892088.1| GENE 85 92359 - 93180 874 273 aa, chain - ## HITS:1 COG:STM3699 KEGG:ns NR:ns ## COG: STM3699 COG1045 # Protein_GI_number: 16766984 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 273 1 273 273 537 98.0 1e-153 MPCEELDIVWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPA IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WNEGRRALAIFLQNQVSMSFQVDIHPAAKIGRGIMLDHATGIVVGETAVIEDDVSILQSV TLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVP ARIVGKPDSDKPSMDMDQHFNGIHHTFEYGDGI >gi|333596724|gb|GL892088.1| GENE 86 93256 - 94275 1084 339 aa, chain - ## HITS:1 COG:ECs4486 KEGG:ns NR:ns ## COG: ECs4486 COG0240 # Protein_GI_number: 15833740 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 625 93.0 1e-179 MSTVNASMTVIGAGSYGTALAITLARNGHDVVLWGHDPKHIATLQHDRCNVAFLPDVPFP DSLYLESDLATALAASRNILIVVPSHVFGEVLRQIKPLMRADARIVWATKGLEAETGRLL QDVAREALGTAIPLAVISGPTFAKELAAGLPTAISLASTDQAFSDDLQQLLHCGKSFRVY SNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLTEMSRLGEALGADPATF MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGSDVKSAQEKIGQVVEGYRNTKEVRELAHRF GVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSN >gi|333596724|gb|GL892088.1| GENE 87 94275 - 94742 507 155 aa, chain - ## HITS:1 COG:ECs4487 KEGG:ns NR:ns ## COG: ECs4487 COG1952 # Protein_GI_number: 15833741 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 301 95.0 3e-82 MSEQNNTEMTFQIQRIYTKDVSFEAPNAPHVFQKDWQPEVKLDLDTASTQLADDVYEVVL RVTVTASLGEETAFLCEVQQGGIFSIGGIEGNQMAHCLGAYCPNILFPYARECITSLVSR GTFPQLNLAPVNFDALFMNYLQQQAGEGAEQHQDA >gi|333596724|gb|GL892088.1| GENE 88 94773 - 95024 311 83 aa, chain - ## HITS:1 COG:STM3702 KEGG:ns NR:ns ## COG: STM3702 COG0695 # Protein_GI_number: 16766987 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 82 1 82 83 160 91.0 5e-40 MANIEIYTKATCPFCHRAKALLSSKGVTFKELPIDGDAIKREEMIQRSGRTTVPQIFIDA QHIGGCDDLYALDARGGLDPLLS >gi|333596724|gb|GL892088.1| GENE 89 95036 - 95467 496 143 aa, chain - ## HITS:1 COG:STM3703 KEGG:ns NR:ns ## COG: STM3703 COG0607 # Protein_GI_number: 16766988 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Salmonella typhimurium LT2 # 1 143 1 143 143 252 88.0 2e-67 MQEIMQFVSRHPVLSIAWIGLLVAVLFTTFKGLTSKIKVITRGEATRLINKEDAVVVDLR QRDDFRKGHIAGAINLLPAEIKANNIGELEKHKAQPIIVVDGTGMQAQESANALHKAGFE NVTVLKEGISGWSGENLPLVRGK >gi|333596724|gb|GL892088.1| GENE 90 95737 - 97260 1771 507 aa, chain + ## HITS:1 COG:gpmI KEGG:ns NR:ns ## COG: gpmI COG0696 # Protein_GI_number: 16131483 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Escherichia coli K12 # 1 507 8 514 514 930 92.0 0 MVLVILDGYGYREDQQDNAIFNAKTPVMDALWAKRPHTLIDASGLEVGLPDRQMGNSEVG HVNLGAGRIVYQDLTRLDVEIKERTFFANPTLTGAVDKAVAAGKAVHIMGLLSAGGVHSH EDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAKGSLEAFEDKFAALGKGRVASIIGR YYAMDRDNRWDRVEQAYDLLTLAKGEFQFATAVEALEAAYARDENDEFVKATVIRAEGQA DAAMEDGDALIFMNFRADRAREITRAFVNSDFDGFARKKVVKIDFIQLTEYAADINAPCA YPPASLENTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEDPFKGEDRILINSPKVAT YDLQPEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEQ VAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKSVKAVEGGKLS DIAPTMLSLMGMPIPEEMTGKPLFIVE >gi|333596724|gb|GL892088.1| GENE 91 97270 - 98553 1237 427 aa, chain + ## HITS:1 COG:STM3705 KEGG:ns NR:ns ## COG: STM3705 COG4942 # Protein_GI_number: 16766990 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 556 90.0 1e-158 MRGKAIFSITWVVKPLRLSVRPLFYASALSAGVLLCAASAHADDRDQLKSIQADIAAKER AVRQQQQQRATLLAQLKKQEEAISAAARKLRETQNTLAQLNKQIDEMNASIAKLERQRDA QERNLAAQLDAAFRQGEHTGLQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREE VTTQKAALEEKQSQQQTLLYDQQAQQEKLEQARNERKKTLAGLESSIQAGQSQLSEMRAN ESRLRNSIARAEAAAKARAEKEAREAQAVRNKQQEASRKGTTYKPTENERSLMSRTGGLG SPRGQAYWPVRGTILHRYGEQLQGELRWKGIVIGASEGSEVKAIADGRVILADWLQGYGL VVVVEHGKGDMSLYGYNQSALVSVGTQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVN PQPWLGR >gi|333596724|gb|GL892088.1| GENE 92 98599 - 99507 910 302 aa, chain + ## HITS:1 COG:STM3706 KEGG:ns NR:ns ## COG: STM3706 COG2861 # Protein_GI_number: 16766991 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 297 15 311 320 476 82.0 1e-134 MALAAPVYAGKLAIVIDDFGYRPHYENQVLAMPSAISVAVLPNAPHAHEMATKAHNSGHQ VLIHLPMAPLSKQPLEKDTLRPDMSSDEIDRIIRDAYNKVPYAVGLNNHMGSAMTSSLYG MLKVMQALERYNLYFLDSMTIGNSQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRA VQLARRNGSAIAIGHPHPSTVRVLQQMLPGLPADITLVRPSDLLNEPQVDTSRPGSAQPP ATQPRNPFRGVKNCTLKQPPEPVHATRFFTVISESVSQSTLVQYFQHQWQGWGKKSAASQ SQ >gi|333596724|gb|GL892088.1| GENE 93 99528 - 100733 895 401 aa, chain + ## HITS:1 COG:SMb21250 KEGG:ns NR:ns ## COG: SMb21250 COG0438 # Protein_GI_number: 16264502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Sinorhizobium meliloti # 198 377 216 384 427 94 33.0 3e-19 MPQRHKILLLDTGKEWGGGTNSMLELLKRINREKFDITCCFYRDYSRAEGQTIGQVLNGI GIPLIVIPQHKQPAWAKIAKELGRSLLFFSRSARKAFTRHIDSLWRIRPNVSKIETIFRE GGFDTLYMNNQPGSNEEGYLAGANLHARIIQHCRIEPVLTPPLVKLVNAHATKIIAVSHG VERVLLQHGVRPELCTTVNNAIDIHQPLPDRRAMRQRLHIDDDTFVFGSIGSLIPRKANH HTLEALAQFSQRHPQAKWKMVLVGEGAERGALAAQADALGIAEHVIFTGFQNTPFDYLAT FDAFILASQSEGLPRVVLEAMLLNIPVIGSKVTGTAELIDHESTGLLFPWSDVSQLAQHL DNIWQDPALRARLAAAAHQNVCNVYAIESYVNGVEAVLGAQ >gi|333596724|gb|GL892088.1| GENE 94 100749 - 101663 993 304 aa, chain + ## HITS:1 COG:no KEGG:Pvag_3178 NR:ns ## KEGG: Pvag_3178 # Name: not_defined # Def: hypothetical protein # Organism: P.vagans # Pathway: not_defined # 1 302 33 333 335 468 74.0 1e-130 MFKFLNARYRHITGRHNIPYASLPATRDLVAVDSIVIPCTGADFVEEALLSATFAERYAT DVSEIVIVSDQPESAFGELPPKTRVVTLTLPVREENYRYKQIYLSRLVKLNAPLQARGEG VLMIDSDLNLLKMPEINMADMHIYSSFRQGKMIAKLDGAPAEKVPAYYKETVRPYLVDHV NGAFLAATKKTWRRICPLWLTLFQDTWELMDDTQPPTDQLPLAALLDMLDLKTVNLGDWM NWPVSKKIGGQEAVVPKEVIGAHGGFPLSEWQKYLESPDNKLLFKGQDYTRKVRYLTDEE KKNQ >gi|333596724|gb|GL892088.1| GENE 95 101690 - 102718 1377 342 aa, chain - ## HITS:1 COG:STM3708 KEGG:ns NR:ns ## COG: STM3708 COG1063 # Protein_GI_number: 16766993 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 341 1 341 341 687 96.0 0 MKALSKLKAEEGIWMTDVPEPEVGHNDLLIKIRKTAICGTDVHIYNWDQWSQKTIPVPMV VGHEYVGEVVGIGQEVKGFSIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRPGC FAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAA AVAKHVGARNVVITDVNEYRLSLARKMGVTRAVDVSKESLTDVMEELGMTEGFDVGLEMS GAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWNKVIFKGLFIKGIYGREMFETWYKMAA LIQSGLDLSPIITHRFSIDEFQQGFDAMRSGQSGKVILSWDK >gi|333596724|gb|GL892088.1| GENE 96 102728 - 103924 1583 398 aa, chain - ## HITS:1 COG:STM3709 KEGG:ns NR:ns ## COG: STM3709 COG0156 # Protein_GI_number: 16766994 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 398 1 398 398 749 95.0 0 MRGDFYKQLNSDLDTARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPE LIAAAKNGMDTHGFGMASVRFICGTQDSHKQLEQKLASFLGMEDAILYSSCFDANGGLFE TLLGAEDAIISDALNHASIIDGVRLCKAKRFRYANNDMVELEARLKEAREAGARHVLIAT DGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITG TLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVESGAELRD RLWANARLFREKMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFFPVV PKGQARIRTQMSAAHSPEQIERAVEAFTRIGKQLGVIA >gi|333596724|gb|GL892088.1| GENE 97 104140 - 105072 1442 310 aa, chain + ## HITS:1 COG:ECs4497 KEGG:ns NR:ns ## COG: ECs4497 COG0451 # Protein_GI_number: 15833751 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 608 96.0 1e-174 MIIVTGGAGFIGSNIIKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEILHYCLEREIPFLYASSAATY GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRA ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT EYMAWLNRDA >gi|333596724|gb|GL892088.1| GENE 98 105075 - 106121 1118 348 aa, chain + ## HITS:1 COG:rfaF KEGG:ns NR:ns ## COG: rfaF COG0859 # Protein_GI_number: 16131491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 675 93.0 0 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDA RVLDKAAWPLMVERYVALAYDKGVMRSAKDLPQPLLWPQLQVSDGEKSHTSNAFGISSER PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQIVLFGSAKDHEAGNEILATLSNEQQ AWCRNLAGETQLEQAVILIAACKAVVTNDSGLMHVAAALDRPLVALYGPSSPDFTPPLSH KARVIRLITGYHKVRKGDAAEGYHQSLIDINPQRVLDELNALLLSEEG >gi|333596724|gb|GL892088.1| GENE 99 106125 - 107108 876 327 aa, chain + ## HITS:1 COG:rfaC KEGG:ns NR:ns ## COG: rfaC COG0859 # Protein_GI_number: 16131492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 316 1 316 319 498 78.0 1e-141 MRVLIVKTSSMGDVLHTLPSLTDAMRAIPGIRFDWVVEEGFAQIPTWHEAVDRVIPVAIR RWRKAWFSAPIKAERKAFREAVQAQRYDAIIDAQGLVKSAALVTRLAHGVKHGMDWHTAR EPLASLFYNRRHHIAKQQHAVERTRELFAKSLGYAKPDSQGDYAIAQHFLREAEKDIEPY LVFLHATTRDDKHWPETHWRRLIELMQPCGIHIKLPWGAEHERQRAERLAAGFSHVEVLP KLTLAQVAAQLAGANAVVSVDTGLSHLTAALDRPNITIFGPTDPGLIGGYGKNQHQMVSP TQQTKDISADAIFSFLQGSHRLSNRDI >gi|333596724|gb|GL892088.1| GENE 100 107112 - 108221 760 369 aa, chain + ## HITS:1 COG:no KEGG:ECL_00137 NR:ns ## KEGG: ECL_00137 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 369 1 369 369 683 88.0 0 MSYVFLLILLFPVKLLRKLFRKDTGKNLVIQTAKIGDFINATPLLAYLQKSDVLISRSVG ALAKHDETIEQIYFIEQHKRNLWRKLCFACRIMNRYDNVYLLQPNSVNLFFAAVCNAKNK QFLSIYTRRWYHGIFYLAADGTVEHGKKTLSVTNYLKLADRSLTWQDSPKHATKPLFKPT TWPAILDKPDVIRIGISIAAGNKAKTVPPVIWKQIVDRLADLPCEFYVFGAPNEQSWMDD ITRLYGEIPNFINLIGKLSLEELPWAISKMDCYIASDSGNVYIADAVGVPVVLLFGPCCH YEQRPLGNVMLIGNDDNICSYVFETRYYFPQEREALFSVTDSALHDLQQFIRTLPKARSL ASAPDAQGN >gi|333596724|gb|GL892088.1| GENE 101 108227 - 109126 282 299 aa, chain + ## HITS:1 COG:mlr5274 KEGG:ns NR:ns ## COG: mlr5274 COG0463 # Protein_GI_number: 13474399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Mesorhizobium loti # 4 224 11 238 322 68 27.0 2e-11 MAFLSVIIAAHNAEATLHATLSSLLAATDQDTEIIIFNDSSEDATQAIIDEWLPEFPQAI TRTVNFRNVGRVRNSAVALASGEYITMLDSDDCLKPGSLRDAITFLKAQRPDMLLTRLLE IRDPRKITSDWQGFNPVPLSQNEAVARFLRHKDFQAHLIGQFIHRSLYENNPIPPMLCYE DFAVFPGMLMQSSKIVYQRQGHYYYIKRRDSLSSSLDASKISTLVECTLQMESTFPSSFK HLVNCHWFDIYSNHRSCLTDQQLQLVKQRVKAMYTLSFFLSTDVRFSYKKRVIEALWKK >gi|333596724|gb|GL892088.1| GENE 102 109174 - 110325 797 383 aa, chain + ## HITS:1 COG:rfaL KEGG:ns NR:ns ## COG: rfaL COG3307 # Protein_GI_number: 16131493 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Escherichia coli K12 # 34 358 69 392 419 97 27.0 4e-20 MLALVSSGKQREFFYIAIYVSIIGLAFEYKKITLRPFTIALPILLIGILNLGWYFLYEYH NEGLNLYSDYLGASKKLILASILIFYIDRFKFYIDKDTFKKFFFFATALGFVLATGYGLW QASQGMTRVEMAINRATVSAYVYSVLSLAFVYSLYLQRNVKLYVVAGFTILLSYFVILLT GTRAAMGLYLLLAIVLTLYHFRRIHLKSALIFLCIVAGVVIVSYKPLISPKIQQTQREVE RYQQGIDRTSLGARFSMWTVGIQNGLAHPLGQSLEEREVWTRHYIKDGHPHLGSALEYIK VHLHNEFIEKYSLQGIPGVAVMLFFFVSMIVYALRNRNALLLTSMLLLLLYGLTDVILLS SEALIFFMILFALSTPFSQTKQQ >gi|333596724|gb|GL892088.1| GENE 103 110352 - 111305 767 317 aa, chain - ## HITS:1 COG:no KEGG:ECL_00134 NR:ns ## KEGG: ECL_00134 # Name: not_defined # Def: lipopolysaccharide biosynthesis protein WalW # Organism: E.cloacae # Pathway: not_defined # 1 317 1 317 318 640 94.0 0 MKKPAFIITIDTEGDNLWQNHRVIKTENARYLARFQALCERFGFKPVWLTNYEMAVEPVF IEFAKEVIARGQGEVGMHLHAWNSPPEHDLTGDDWRWQPYLIEFSDEIMREKVLFMTRLL EETFQTKMLSHRAGRWAFDSRYAQLLIELGYQVDCSVTPRVNWRNAKGAPQGNGGTNYQH FPDRAYFLDVDDISRPGNSPLLEVPMSIQYKHPAWLNSLKQGYDRLRGKYRSPSVNWLRP SGGNAAEMIKVAQQCLAQGNDYVEFMLHSSEFMPGGSPTFKDEAAIEGLYQDLEQLFTWL SDKTVGMTLAEFYQYKK >gi|333596724|gb|GL892088.1| GENE 104 111456 - 112526 768 356 aa, chain + ## HITS:1 COG:YPO0416 KEGG:ns NR:ns ## COG: YPO0416 COG0859 # Protein_GI_number: 16120749 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 16 350 1 336 346 289 48.0 5e-78 MMMNNLPDTPDLRILLIKLRHHGDMLLTTPVINSLRQKWPEARIDVLLYEETRDMLAAHP AIGTIYGIDRKWKQLGTLKHLQKEWQLLRALRAQHYHLVINLADQWRSAIVTRFTGAPVR LGFAFNKRNNAFWRFCHNERVSVAGHQSLHTVEQNLSILSALPVTANPTVTMAYSADDWH HAHQKLTQKGVGERYIVIQPTSRWFFKCWDEGKMAQTIAALQQDGHTIVLTAGPDKKELA MIDRILAAAPQTGVVSLAGQLTLRQLASLIDHACLFIGVDSVPMHMAAALQTPCVALFGP SKLTFWSPWQVNGEVIWAGDYGPLPNPDAIDTKTTERYLDAIPVDAVVSAARRYLQ >gi|333596724|gb|GL892088.1| GENE 105 112523 - 113650 668 375 aa, chain + ## HITS:1 COG:PA5010 KEGG:ns NR:ns ## COG: PA5010 COG0438 # Protein_GI_number: 15600203 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 6 349 3 350 373 103 25.0 4e-22 MRLHRLAIVRQKYRPDGGAERFVSRALTALSNQNLELNVITREWQGEKQDDWHIHICDPR KWGRISRERGFAHAARALWHQQQFDIVQSHERIPGCDIYRAGDGVHRRWLLQRTRILPAW RAKLLMHDRYHRYVMRAEREMYQAPELKAVICNAEMIKREIVEDFDIDAKKIHVIYNSID SSRFVPAEEMQRAVLRQQFGLPADAVIFCFVGSGFERKGLASAIRAIAGTSAWLVVVGQD KAENRYRDLARSLGCEGQIRFLGMQKETLPFYQLSDGLLLPTLYDPFPNVILEAMACGLP VITSESCGGSEFIEQGQNGFYCDALDIRTLKEAVMSIPSLEKNNNMGLAARERVREATPE KLSSQLISLYQKLLD >gi|333596724|gb|GL892088.1| GENE 106 113665 - 114753 1026 362 aa, chain + ## HITS:1 COG:Cj1127c KEGG:ns NR:ns ## COG: Cj1127c COG0438 # Protein_GI_number: 15792452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Campylobacter jejuni # 1 307 6 305 365 102 26.0 2e-21 MIIDGLPGGGAEKTVLTLSSGLTELGHQVTLFSLRKVCDYAIPEGIDFQVVQDSCKKPWR KLTEIPRRARLLDRAIEQAERNGKFDVVFSHLHKTDRIVAHSRVLDRDKVWFCVHGMFSF SYLRHRSGLSRWFKHYKIRHTYENRNVVAVSGAVLHDLSEVLAIPLRRKAVIHNPFDIPD IQRLAEAPFEMQGQDYIIHVGRFHEHKRHDRLLRAFALSKIDASLVLMGKGSDAKIDQLK QLAAKLGIENKIVFRPFETNPYPWIKGARLLVLSSDCEGFGNVLVESIICQTPPVSTNCP GGPAEILTGPLARGLTALTDESLAKTLAELYASPPVVDRDTIASFGINAICQQYIALVDN QK >gi|333596724|gb|GL892088.1| GENE 107 114765 - 115754 879 329 aa, chain + ## HITS:1 COG:ECs4493 KEGG:ns NR:ns ## COG: ECs4493 COG0463 # Protein_GI_number: 15833747 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 327 1 326 338 243 38.0 3e-64 MQNSAPLLSVVVAVYNGKAFLDQFFTCLVNQHIDSMEVIIVNDGSTDRSMQIVEKWREKL PQMQVIEQPNQGVSIARNTGLAVATGQYLSFPDIDDVFKPGMYQRLLDMAVTQNLDVATC NGNYVWENNKKPSRPIFPEDKLASTGVMNGAAWLKKALDSRKFLHVTWLNIYRHDFIRQH GFRFEPGLRHQDIPWTTEVLLAAERVQYTSERFYNYYIHSASVSHTPDNDDTLIRSARHY MKILKMLDAINQRYPDKVKNIPACHWQIAKEGLGIIHTFDNMKDETKKSMIIKEFFDTGI WKLIWKSAKSPRLRWRLGRRYFRLKRYLA >gi|333596724|gb|GL892088.1| GENE 108 115820 - 117094 1202 424 aa, chain + ## HITS:1 COG:YPO0055 KEGG:ns NR:ns ## COG: YPO0055 COG1519 # Protein_GI_number: 16120408 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Yersinia pestis # 4 424 5 425 425 698 82.0 0 MELLYTALLYIIQPLVWLRLLLRSRKAPAYRKRWAERYGYCRNKVAPDGILLHSVSVGET LAAIPLVRALRHRYPSLPITVTTMTPTGSERVMSAFGKDVHHVYLPYDLPCAMNRFLNTV RPKLVIVMETELWPNMISALHARKIPLVIANARLSERSAKGYGKLGKFMRRLLSKITLIA AQNEEDAARFIALGLKRNQLAVTGSLKFDISVTPELAARAVTLRRQWAPRRQVWIATSTH DGEEAIILQAHRQLLEKFPDLLLILVPRHPERFKDAREMVQKGGFSFTLRSSGEIPSGST QVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEPAAHAIPVLMGPHTFNFKDICAK LQQADGLITVTDADSVVKEVSTLLTDEDYRLWYGRHAVEVLHQNQGALTRLLQLLQPYLP QRSH >gi|333596724|gb|GL892088.1| GENE 109 117094 - 117864 802 256 aa, chain + ## HITS:1 COG:YPO0054 KEGG:ns NR:ns ## COG: YPO0054 COG0463 # Protein_GI_number: 16120407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 4 256 6 260 260 362 69.0 1e-100 MSTRLSVVMIAKNAADLLPDCLASVAWADEIVILDSGSTDNTVEVARAAGANVFTNTDWQ GYGIQRQRAQSYATGDYVLMIDTDERVTPELRQAIQTVLAAPQPGAVYSIARRNYFLGRF MRHSGWYPDRVMRLYPRERYQYNDNLVHESLACDNAQVIPLTGDLLHLTCRDFASFQQKQ LNYATAWAQERHARGKKATLTGIFTHTLGAFLKTLLLRGGVLDGKQGWLLAVVNAQYTFN KYTELWALCRGYSEKT >gi|333596724|gb|GL892088.1| GENE 110 117868 - 118347 379 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 6 157 7 158 164 150 48 4e-35 MSTKAIYPGTFDPITNGHLDIITRAASMFDKVILAIAASPSKKPMFDLNERVQLAIDAIA HLPNVEVVGFSDLMANFARAQQANILIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP SKEWSFISSSLVKEVARHHGDVTHFLPVNVHQALMEKLK >gi|333596724|gb|GL892088.1| GENE 111 118350 - 119159 785 269 aa, chain - ## HITS:1 COG:ECs4510 KEGG:ns NR:ns ## COG: ECs4510 COG0266 # Protein_GI_number: 15833764 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 521 92.0 1e-148 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSDEIHALSDKPVLSVQRRAKYLL LELPDGWIIIHLGMSGSLRILTEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL EGHNVLAHLGPEPLSEAFNADYLKEKCAKKKTPIKPWLMDNKLVVGVGNIYASESLFAAG IHPDRLASSLSAQECELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK GEPCRACGTPIIATKHAQRATFYCRQCQK >gi|333596724|gb|GL892088.1| GENE 112 119232 - 119399 280 55 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146309770|ref|YP_001174844.1| 50S ribosomal protein L33 [Enterobacter sp. 638] # 1 55 1 55 55 112 100 1e-23 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVLYKEAKIK >gi|333596724|gb|GL892088.1| GENE 113 119422 - 119658 403 78 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146309769|ref|YP_001174843.1| 50S ribosomal protein L28 [Enterobacter sp. 638] # 1 78 1 78 78 159 100 7e-38 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID KKGIDTVLSELRARGEKY >gi|333596724|gb|GL892088.1| GENE 114 119876 - 120541 644 221 aa, chain - ## HITS:1 COG:STM3729 KEGG:ns NR:ns ## COG: STM3729 COG2003 # Protein_GI_number: 16767014 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 347 76.0 1e-95 MEETELLLPREKMLRHGVTLLKDDELLALFLRTGTPGKTVFTLAKELIDHFGSLYGLLTA ELEAFTHVEGIGVAKYAQLRGIAELARRFYNVRMEEEDPILTPDMTREFLQSQLSDLERE IFMVIFLDNKNRVLKHTRLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPS RADKAITERIIKCCQFMDIRVLDHLIIGRGEYISFAERGWI >gi|333596724|gb|GL892088.1| GENE 115 120715 - 121926 1288 403 aa, chain + ## HITS:1 COG:ECs4514 KEGG:ns NR:ns ## COG: ECs4514 COG0452 # Protein_GI_number: 15833768 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Escherichia coli O157:H7 # 1 403 25 430 430 699 90.0 0 MSLAGKKIVLGVSGGIAAYKTPDLVRRLRERGADVRVAITEGGKAFITPLSLQAVSGYPV SDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVTTICLATPAPVAV VPAMNQQMYRNAATQHNLDTLASRGLLIWGPDSGSQACGDVGPGRMLDPLTIVDMAAAHF SPVNDLQHLNIMITAGPTREPLDPVRYITNHSSGKMGFAIAAAAAKRGANVTLVSGPVSL TTPAFVQRINVTTALEMEAAVQAHAQQQHIFIGCAAVADYRAETIADAKIKKQGDELTIK MVKNPDIVAGVAALKTHRPYVVGFAAETNNVEEYARQKRTRKNLDLICANDVSLSTQGFN SDSNALHLFWQDGDKVLPLERKELLGQQLLDEIVTRYDEKNRR >gi|333596724|gb|GL892088.1| GENE 116 121904 - 122362 560 152 aa, chain + ## HITS:1 COG:STM3731 KEGG:ns NR:ns ## COG: STM3731 COG0756 # Protein_GI_number: 16767016 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Salmonella typhimurium LT2 # 2 152 1 151 151 286 94.0 1e-77 MMKKIDVKILDPRVGEQFPLPTYATSGSAGLDLRACLDDAVELAPGATTLIPTGLAIHIA DPSLAAVILPRSGLGHKHGVVLGNLVGLIDSDYQGQLMVSVWNRGQDSFTIEPGERIAQM VFVPVVQAEFNLVADFDATDRGEGGFGHSGRR >gi|333596724|gb|GL892088.1| GENE 117 122485 - 123081 679 198 aa, chain + ## HITS:1 COG:ECs4516 KEGG:ns NR:ns ## COG: ECs4516 COG1309 # Protein_GI_number: 15833770 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 198 15 212 212 336 96.0 2e-92 MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILKDEKDTSARLRLIVLLILGFGERNPGLTRILTGHALMFEQDR LQGRINQLFERIEAQLRQVLREKKMREGEGYETDETLLAGQILAFCEGMLSRFVRSEFKY RPTDDFDARWPLVAAQLQ >gi|333596724|gb|GL892088.1| GENE 118 123163 - 123804 892 213 aa, chain - ## HITS:1 COG:pyrE KEGG:ns NR:ns ## COG: pyrE COG0461 # Protein_GI_number: 16131513 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 213 1 213 213 399 94.0 1e-111 MKSYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS GIDFDLLFGPAYKGIPIATTTAVALAEHHDRDVPYCFNRKEAKTHGEGGNLVGSALQGRV MLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGDISAIQEVERDYGCKVTS IITLKDLIVYLEEKPEMADHLAAVKAYREAFGV >gi|333596724|gb|GL892088.1| GENE 119 123872 - 124588 826 238 aa, chain - ## HITS:1 COG:STM3734 KEGG:ns NR:ns ## COG: STM3734 COG0689 # Protein_GI_number: 16767019 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Salmonella typhimurium LT2 # 1 238 1 238 238 408 97.0 1e-114 MRPSGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT AEYGMLPRATHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKTLGEFTITLDCDVIQ ADGGTRTASITGACVALADALNKLVAAGKLKTNPMKGMVAAVSVGIVNGEALCDLEYVED SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLSLLALARGGIESIVTTQKAALEN >gi|333596724|gb|GL892088.1| GENE 120 124714 - 125577 1118 287 aa, chain + ## HITS:1 COG:STM3735 KEGG:ns NR:ns ## COG: STM3735 COG1561 # Protein_GI_number: 16767020 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Salmonella typhimurium LT2 # 1 287 1 287 287 443 95.0 1e-124 MIRSMTAYARREIKGSWGSATWEMRSVNQRYLETYFRMPEQFRSLEPVVRERIRTRLTRG KVECNLRFEPDASAQGELILNEKLAKQLVNAANWVKMQSDEGEINPVDILRWPGVMAAGE QDLDAITAEILAALDGTLDDFIVARETEGQALKAMIEQRLEGVSAEVAKVRAHMPEVLQW QRERLVAKLEEAEVQLENNRLEQELVLMAQRVDVAEELDRLEAHVKETYNILKKKEAVGR RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE >gi|333596724|gb|GL892088.1| GENE 121 125786 - 126403 688 205 aa, chain + ## HITS:1 COG:yicG KEGG:ns NR:ns ## COG: yicG COG2860 # Protein_GI_number: 16131517 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 205 19 223 223 299 87.0 3e-81 MLLHILYLIGITAEAMTGALAAGRRRMDTFGVIIIATATALGGGSVRDILLGHYPLGWVK NPEYVIIVATAAVLTTIVAPVMPHLRRLFLVLDALGLIVFSIIGAQIALDMGEGPVIATI AAVITGVFGGVLRDMFCKRIPLVFQKELYAGISFAAAVLYVALQHYVTSHDVVVISTLLF GFTARMLALRLKLGLPVFHYKHNAH >gi|333596724|gb|GL892088.1| GENE 122 126430 - 128607 2357 725 aa, chain - ## HITS:1 COG:ZyccC_1 KEGG:ns NR:ns ## COG: ZyccC_1 COG3206 # Protein_GI_number: 15800902 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli O157:H7 EDL933 # 1 479 1 479 480 681 72.0 0 MSTNNLHAHDASAANNEIDLVRLLGELLDHRKFILILTALFTLAALLYAFFATPVYQADA LIQVEQKQGNALLSNLSEFIPDSSPESAPELQLLQSRMILGKTIDDLNMRTQVSENYFPL VGRGWARLTGQQPGIVDISMLNLPPVAGQAQKLTLTVGEKGHYQLEGDNVTLQGVVGHPL SAANIAINIADIQAKPGTQFTISQLSELEAIDALQLRFSVSERSKDSGMLGLTITGEDPD EMARVLNCIADNYLQQNVARQAAQDAKSLQFLKQQLPQVRSELDQAEEKLNRYRQQNDSV DLNLEAKAVLEQIVNADNQLNELTFREAEISQLYKKDHPTYRALIEKRQTLEQEKNRLNK RVSSMPATQQEVLRLSRDVESGRVIYQQLLNREQELSIARSSAIGNVRIIDPAVTRPQPV KPKKALVVVLGVLLGLFVSAGWILARSMLRMGIETPEQLEEHGINVYATVPLSEWLAKKM RLRKKDFLSRGLSHKTKHIPFLAADNPVDLSVEAIRGLRTSLHFAMMESANNILMISGAT PDSGKTFVSSTLAAVVAQAGQKVLYIDADMRRGYAHDLFKLDNTCGLSEILSGKAEYAQG VQTFDKGGFDTIVRGQIPPNPAELLMHMRFRKLLDWANERYDLVIIDTPPILAVTDAAVV GRRAGTTLLVARFGMNSVKEMLVCVQRLEQSGVNTKGVILNGVVKRASNAYGYGYHHYGY NYSSN >gi|333596724|gb|GL892088.1| GENE 123 128630 - 129073 473 147 aa, chain - ## HITS:1 COG:ECs1138 KEGG:ns NR:ns ## COG: ECs1138 COG0394 # Protein_GI_number: 15830392 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 147 5 151 152 194 68.0 4e-50 MAKLTVNAILVICTGNICRSPIGERLLRQLLPAARVDSAGICGLEGRTADSQAAEIAAER GTQLEGHVARRLTPAMVRDYDLILAMELEHIEQVTAIAPEARGKMMLFGHWTGRKEIPDP YRKNRDAFEYVYGLLEQASLEWAKRLS >gi|333596724|gb|GL892088.1| GENE 124 129061 - 130194 1217 377 aa, chain - ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 2 377 3 379 379 628 81.0 1e-180 MKNVKFSVLALAMMALSGCTIVPGQGLSTQGKDIIDLPDSNYDLEKMVNVYPLTPGLVEQ LLPGKVDSRANPELDRQLQNYQYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNA DGTIFYPYIGKIHVVGKTLAQVRDEIAARLDSVIESPQVDVSVAAFRSQKAYVTGEVAKS GQQPITNIPLTIMDAINAAGGLTAEADWRHVVLTHNGKDTHISLYALMQRGDLTQNKLLY PGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAQGVNQDMADATGIFVIR PLQGKQNGKIANVYQLNARDATAMVLSTEFQLEPYDIVYVTTAPLVRWNRVISQLVPTIT GVHDLTETGRYIRTWPN >gi|333596724|gb|GL892088.1| GENE 125 130238 - 132331 2320 697 aa, chain - ## HITS:1 COG:no KEGG:E2348C_0969 NR:ns ## KEGG: E2348C_0969 # Name: gfcD # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 5 697 6 698 698 1159 80.0 0 MNKLFLLSGLALAISSACHAELRTWPDPTGPSQSDFGGTGLMQMPDARFGREGEFSVNYR DNDQYRFYSSSVVLFPWLEGTIRYTDVRTRKYSGDEDFSGDQSYKDKSFDFKVRLWEEDY SLPQVALGKRDIAGTGLFDGEYLVASKMAGPVDFTFGIAWGYPGNSDNVGNPLCHDNNKY CTRAESHDAGDISFSDMFRGPASLFGGLQYQTPWQPLRLKLEYDGNNYADDFAGSLKQSS HINVGAVYRVADWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDNPKPAWQPAPTGETL DYTSAANQLTALKYNAGFDAPEILQHGNTLYVTGEQYRYRDPREAVDRANRILINNLPDG VDTIAITQQRDHLPLVTTQTDVASLRKQLIGQPLGQEETLKQQRVEPVDTTAFGRGYRIR ADRFSYSVKPTLAQSLGGPEDFYMFQVGVMASANYWLTDRLLLDGGVFANLYNNYDKFKS SLLPADSSLPRVRTHIRDYVSNDVYINNLQANYVDALGHGFYAQIYGGYLETMYGGVGAE ALWRPLDNDWALGVDANYVKQRDWDDMMRFTDYSVPTGFITAYWNPAKLNSVLMKLSVGQ YLAKDKGATLDVAKRFDSGVTVGVWAALTNVSKEDYGEGGFSKGFYISIPLDLMTIGPNR NRAVVSWTPLTRDGGQMLGRKYQLYDMTSERETPVGQ >gi|333596724|gb|GL892088.1| GENE 126 132331 - 133068 387 245 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E2330 NR:ns ## KEGG: SbBS512_E2330 # Name: ymcB # Def: group 4 capsule (G4C) polysaccharide, YmcB # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 245 1 248 248 200 43.0 4e-50 MNGHKKWLPGVGLSLFSLSALGASVVTVHQPGKTWSAEQADTLSRLVTQPQFNNVWWQGA AIATPSATRRAQQTQQQVLALLTAWQNRANDERAATVRAVAAQIRSLRIVGRQFVNLDPD AVRTDAHGDRPLEGRYDLWLSPAPRTVTLMGAVATPGKRAWRPGASIRDYLQGQPRLAGA DRNNVTVIDPDGSTVVAQVGYWNARHIEAEPGAVLWVGFDPRAVPDDFTGLNEQIVALLT RRIPD >gi|333596724|gb|GL892088.1| GENE 127 133065 - 133733 458 222 aa, chain - ## HITS:1 COG:no KEGG:SSON_0993 NR:ns ## KEGG: SSON_0993 # Name: ymcC # Def: putative regulator # Organism: S.sonnei # Pathway: not_defined # 9 222 1 214 214 271 63.0 1e-71 MLFNKGFLVRLFILLIMILLIQGCTPSQQSIIETFNASLDGRQDVTVTDGQIQALPYSTM YLRLDDGPRILVVLGYIEQGNSKWLSQDNAMIVTHNGRLIRTLKLPYNLLEVTNLEHDPL RHTPQLHNGSQWSRDVRWQEEGRHRSAHLTSHFSLSGTENLTIAGNTLRCQVWQETVQAD GLDRRWHNTFWIDSATGQVRQSEQMLGAGVFPVAMTMLKPAP >gi|333596724|gb|GL892088.1| GENE 128 133825 - 134121 155 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRTLCTVLTALTLATALPAMGATTEAGSTSAATTGTTTGATVGTTAGTTGGLAAGAIGT TAVVTTAAIAGVATLAVVAASDSGDDSGNGTSTTTVTR >gi|333596724|gb|GL892088.1| GENE 129 134828 - 136498 1378 556 aa, chain - ## HITS:1 COG:yicF KEGG:ns NR:ns ## COG: yicF COG0272 # Protein_GI_number: 16131518 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 556 3 560 562 672 60.0 0 MVRWISILMIFLSSGAMAICPVWSPAKAGQEIAALKAQLTRWNDDYWKQGSSEVSDDVYD RLNARLKQWQRCFHDEPLHDDLPAASGTVKHPFAHTGVHKVESQQALSRWMATQQDLWVQ PKVDGVAVTLVYKNGKLAQAISRGDGLQGEEWTAQARMISAIPQTLTGPLANSVLQGELF LLREGHIQQRMGGMNARAKVAGAMMRATDRAALKQTGIFIWAWPNGPKTMKARLSALAEA GFTLTARYTLPVKNAADVEAQRAAWFKASLPFATDGIVVRASAEPPGEQWLPGEGSWVVA WKYLPVAQVTEVKAIHFTVGRTGRITAIAQLEPLMLDDKRVQRVSLGSVNRWQRLDIAPG DQVLVSLAGQGIPRLDNVVWRNVDRRKPQPPSSRYNGLTCFYASPECMEQFFARLTWLSS RQALDIEGIGESGWRTLYQAHRFEHLFSWLQLTQEQLTATPGISATHGAALWHQFNLARE RPFIRWSTAMGIPLARSTLKAAGDRTWQALIQRSEAEWRRLPGVGQEKARQIVNWLHQPQ IDALAKWLAAEHIGGF >gi|333596724|gb|GL892088.1| GENE 130 136749 - 137372 508 207 aa, chain + ## HITS:1 COG:STM3740 KEGG:ns NR:ns ## COG: STM3740 COG0194 # Protein_GI_number: 16767025 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Salmonella typhimurium LT2 # 1 207 1 207 207 384 94.0 1e-107 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRAPRPGEVHGEHYFFVNHD EFRAMIGRDAFLEHAEVFGNYYGTSRETIEQVLATGVNVFLDIDWQGAQQIRKKMPDSRS IFILPPSKDELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDAALSDLK TILRAERLRMSRQKQRHDALITKLLAD >gi|333596724|gb|GL892088.1| GENE 131 137427 - 137702 410 91 aa, chain + ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 112 100.0 2e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN NQILDVRERQEQQEQEAAELQAVTAIAEGRR >gi|333596724|gb|GL892088.1| GENE 132 137722 - 139836 2258 704 aa, chain + ## HITS:1 COG:ECs4525 KEGG:ns NR:ns ## COG: ECs4525 COG0317 # Protein_GI_number: 15833779 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 704 1 702 702 1369 97.0 0 MYLFESLNQLIQTYLPEDQIKRLQQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMK LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHL YSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGGESSTTAQIRAQRWM QSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGH ACVGARVDRQPYPLSQPLFSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKR DDSVSLGRRLLNHALGGSRKLAEIPPENIQHELERMKLASLDDLLAEIGLGNAMSVVVAK NLQQGETTAVPANTQNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHES CRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVDMFNHQGALANLTAAINTASSNIQSLN TEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN >gi|333596724|gb|GL892088.1| GENE 133 139841 - 140530 770 229 aa, chain + ## HITS:1 COG:STM3743 KEGG:ns NR:ns ## COG: STM3743 COG0566 # Protein_GI_number: 16767028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 410 89.0 1e-114 MNSKRYERICEMLARRQPDLTVCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGTRMRTM ASTAAGSNSWVSVKTHQTIGEAVSHLKGRGMQVLATHLSEKAVDFREIDYTRPTCILMGQ EKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYERSNSMLPE DEQQRLLFEGGYPVLARVAKQKKLPYPHVNAQGEIEADAEWWSTMQYAG >gi|333596724|gb|GL892088.1| GENE 134 140534 - 142615 2235 693 aa, chain + ## HITS:1 COG:STM3744 KEGG:ns NR:ns ## COG: STM3744 COG1200 # Protein_GI_number: 16767029 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Salmonella typhimurium LT2 # 1 693 1 693 693 1248 94.0 0 MKGRLLDAIPLNSLTGVGAAQSSKLAKIDLHTVQDLLLHLPLRYEDRTQLYKIGDLLPAI YATVEGEVLNCNITFGGRRMMTCQISDGTGILTMRFFNFNAAMKNSLATGRRVLAYGEAK RGKYGAEMIHPEYRVQGDLSSPELQETLTPVYPTTEGIKQATLRKLTDQALELLDTCAIN ELLPPELAQGMMSLPEALRTLHRPPPTLQLVDLESGKHPAQRRLILEELLAHNLSMLALR AGAQRFHAQPLSQRDELKDKLLASLPFKPTGAQARVTAEIERDMALDVPMMRLVQGDVGS GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKAR LAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGLQQGFH PHQLIMTATPIPRTLAMTAYADLDTSTIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACT QEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMQSFK QGELHLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKA PLSKTAQMRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE VQRLARHIHERYPEQAAALIERWMPETERYSNA >gi|333596724|gb|GL892088.1| GENE 135 142619 - 143821 1586 400 aa, chain - ## HITS:1 COG:ECs4529 KEGG:ns NR:ns ## COG: ECs4529 COG0786 # Protein_GI_number: 15833783 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Escherichia coli O157:H7 # 1 400 1 400 401 582 92.0 1e-166 MIHLDTLSTLVAATLVLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLVLKKSMGWEI DFDMSLKDPLMLAFFATIGLNANLASLRSGGKVLGVFLIVVVGLLLMQNAIGIGMASLLG LDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFENATEVAMACATFGLVLGGLIGGPVA RYLVKHSTTPEGRPDDEMVPTAFEKPDVGRSITSLVMIETIAMIAICLTVGKIVAQWLAG TAFELPTFVCVLFIGVILSNGLAQMGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWELA SLALPMVAILAVQAVFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPMFG >gi|333596724|gb|GL892088.1| GENE 136 144044 - 145435 1976 463 aa, chain + ## HITS:1 COG:STM3747 KEGG:ns NR:ns ## COG: STM3747 COG2233 # Protein_GI_number: 16767032 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Salmonella typhimurium LT2 # 1 462 1 462 463 761 94.0 0 MSVNTLESSDAQPIAQKQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQA LGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKT GGADVPTMMAALFGTLMLASCTEMIISRVLHLARRVITPLVSGVVVMIIGLSLIQVGLTS IGGGYAAMNDHTFGAPKNLLLAGVVLAIIILLNRQRNPYLRVASLVIAMAAGYLLAWAMG MLPENTAPTNSALITVPTPLYYGLGIDWSLLLPLMLVFMITSLETIGDITATSDVSEQPV SGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLV VLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAIMIIALSLAVGL GVSQQPLILQFAPDWVKNLLSSGIAAGGITAIVLNLIFPPEKN >gi|333596724|gb|GL892088.1| GENE 137 145555 - 147249 1848 564 aa, chain + ## HITS:1 COG:no KEGG:ECL_00105 NR:ns ## KEGG: ECL_00105 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 557 1 557 567 966 93.0 0 MKFIGKLLISLLVALLIVVLAFYFLLQTRWGASQVSSWITVNTDYELNFDLMDHRFSSPS HILLENVTFGRDGKPATLVAKKVDIGLSSRQITDLLHMDAITLFDGTLNLSPQTAPLPFQ ADRLQLNNMAFNSPNTAWDLSAQKVTGGVSPWQPEAGNVLGKNAQIQMSAGSLTLNGIPA NNVLIQGQLNGKEVVLNTIGADMARGSLTGSALRNADGGWVIDTLRLNEIRLQSDKSLLD FFAPLSTLPSLQIGRLEVTDARLQGPDWAVTDLDLSLRNLTLSKGDWQSQEGRLSMNASE FIYGSLHLFDPILNAEFSPQGIALRQFTSRWEGGMVRTSGNWLREGQALVLDDVAIAGLE YTLPENWKTLWMDPLPAWLNSVTLKKFGLSRNLVIDIDPAFPWQITSLDGYGANLRLAQD HKWGVWGGNATLNGAAATFNRVDVRRPSLALNANAATVNITDLSAFTEKGILEATATVSQ LPQRQTTVSLNGRGVPLNVLQQWGWPALPIAGDGNIQLTASGSVQANAPLKPTVNGKLSA VNMDKQQVQQTMTGGVVSTMAPAQ >gi|333596724|gb|GL892088.1| GENE 138 147334 - 149652 3203 772 aa, chain - ## HITS:1 COG:STM3749 KEGG:ns NR:ns ## COG: STM3749 COG1501 # Protein_GI_number: 16767034 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Salmonella typhimurium LT2 # 1 772 1 772 772 1477 87.0 0 MKISDGNWLIQPGLNVTYPVQVFDVEQQGNDLVVYVAPRDVRERTWQLDTLMFTVRLFAP QEGIIGVRIEHFQGALNNGPHYPLNVLKDVKVEIENNAEFAELKSGSVSVRVTKGEFWAL DFLRNGQRITGSQLKNNGYVQDSNTDRNYVFERLDLGVGETVYGLGERFTALVRNGQTVE TWNRDGGTSTEQSYKNIPFYLTNRGYGVLVNHPENVSFEVGSEKVSKVQFSVEGEYLEYF VIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPL HVFHFDCFWMKAFQWCDFEWDPVTFPDPEGMIRRLKEKGLKVCVWINPYIGQKSPIFREL KEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACRWYADKLKGLVEIGVDCFKTDFGER IPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKETVGEEEAVLFARSASVGAQQFPVHWG GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLFSSHSRLH GSKSYRVPWAYDDESCDVVRHFTQLKCQLMPYLYRQAALAREFGTPMLRAMMLEFPDDPA CDYLDRQYMLGDSVMVAPVFSEAGDVQFYLPEGRWTHLWHNDEIEGSRWHKQQHDFMSLP VYVRDNTLLALGNNNQKPDYAWHEGTAFQLFNLDDGATAVSEVPAADGSVVFTLKASRQG DIVTLTGDGEARNWSVCLRNVQKVSGVKGGSHTGSEWGVVVKAQGGEVVVHL >gi|333596724|gb|GL892088.1| GENE 139 149665 - 151056 2103 463 aa, chain - ## HITS:1 COG:STM3750 KEGG:ns NR:ns ## COG: STM3750 COG2211 # Protein_GI_number: 16767035 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 2 463 3 460 460 789 88.0 0 MSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLLARALDAIS DPCMGLIADRTRSRWGKFRPWILFGAIPFGIVCVLAYTTPDLSLNGKMVYAAVTYTLLTL LYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDDKAFG FQGGIAVLSVVAFLMLAFCFFTTKERIQVPPSTTSMREDLRDIWQNDQWRIVGVLTILNI LAVCVRGGAMMYYCTWIMGSPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVSIFWWTNA ALAVVSVAMFFVPMHATVLMFGFIFVIGVLHQLVTPIQWVMMSDTVDYGEWTNGKRLTGI SFAGTLFVLKLGLALGGAMIGWMLAGGGYDAAAKTQNSATISIIIGLFTLAPAVCYVLSA IIAKRYYTLKTPFLTKILGELAQGARRNQQEFENLPVSKELQN >gi|333596724|gb|GL892088.1| GENE 140 152069 - 152653 58 194 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A2909 NR:ns ## KEGG: SeSA_A2909 # Name: not_defined # Def: putative phage-related reverse transcriptase/maturase family protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 192 178 367 424 81 31.0 2e-14 MNSFDKKMKSNQKIYFYTRFVDDILIFSTERINIKNEIIKFLPNGLKLNWKKNKVIAVTP CRCYEKCICSKEKCDCFNKCKCKAVNAQIQNFDFLGYNFEFPELSFSKSSDKLKVGLSSK KTLKIKNRLYKSFRDYHNNGNYNLLENRIKFLTGNHFISNGKHKSDRMKSGVYYNYIHLT SLTRYEELDLYLKK >gi|333596724|gb|GL892088.1| GENE 141 153696 - 153881 57 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGIVFHSFLGKWFLSRLIDLKKSLISLNTCVFAIVSLVMNGLLSLCSLDSLIYNLNLDI S >gi|333596724|gb|GL892088.1| GENE 142 154033 - 154767 10 244 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|309797846|ref|ZP_07692228.1| ## NR: gi|309797846|ref|ZP_07692228.1| conserved hypothetical protein [Escherichia coli MS 145-7] conserved hypothetical protein [Escherichia coli MS 145-7] # 12 243 436 667 667 70 25.0 1e-10 MYISDIKTYSSTYRNFIIFNIDFLSFLFAMNIKSRTSHLMSQLIVIIGEINAKLVKSDQD EVIKKLKDETRILIDIAVQNGKPRIEFINFMIAVRSIFKDAVLDEESIKHFYKIDNNKTS HLDYFETCSCLHLLCNKNNNNNLIESIYRSFHEKISNTNNPRNHSEIAHLLLDLGTFPHI PIDIYKDALKLYISKTYGISPAVQDVNAIYNKIRERKLFFIDWNESINIKKLLQKKEMQR GYDS >gi|333596724|gb|GL892088.1| GENE 143 155043 - 155225 64 60 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0068 NR:ns ## KEGG: Ent638_0068 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 54 1 54 66 74 88.0 2e-12 MSTAKRDPNKSKSGKAPTFQIRITPELKALFEAAAKAEGMSLGNWLKSLGRKEIANKKLD >gi|333596724|gb|GL892088.1| GENE 144 155362 - 155703 259 113 aa, chain + ## HITS:1 COG:no KEGG:ECL_00102 NR:ns ## KEGG: ECL_00102 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 113 1 113 113 204 91.0 9e-52 MADSHSTPDTDQSGTERSLIVGYRPNVYDKSTPKIILSGKWLRAAGFDTGQQVTVKVMKG CIVLVAYNEQEQRLQDDYKRTKAKLIEIEDALAAIQIPHAGKRLAKSNTNHLA >gi|333596724|gb|GL892088.1| GENE 145 155807 - 156790 563 327 aa, chain + ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 1 327 16 345 345 488 76.0 1e-138 MFASKDGKVRIECRFESDTLWLSQATICELYGKAKATISGHIKNIFDEGELVENSVVRFY RTTASDGKVYNVQYFSLPVILAIGYRVRSTRGTQFRQWATQTLQEYLVKGFVMDDERLKN PPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALAADYQPSLKETTQFFQTIQNK LHFACTGQTAAELIHQRADATQPHMGLTSYKGEEVRKSDVTTAKNYLSQDEVKELNRVVN MWLDFAEDQAKRRKQVFLRDWQTKLDQFLQFNDREVLEGAGKISKKAADEKACSEYIEYE KKQRLLKEAEGEKDIVGLLKWDKQAKR >gi|333596724|gb|GL892088.1| GENE 146 156780 - 157235 427 151 aa, chain - ## HITS:1 COG:PA1428 KEGG:ns NR:ns ## COG: PA1428 COG0454 # Protein_GI_number: 15596625 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 1 143 1 143 143 122 51.0 2e-28 MKIEAAHPAQFERLVAVWESSVRATHLFLQESDITALRPLLLNAYLPNLRVVVARDDAGI IHGFLGVDKNRIEMLFVDDASRGKGIGKMLLQYAIAEFGVNEVDVNEQNPQGVAFYRHMG FEQVRRSELDGQGNPFPLLHMKLSRNTGISA >gi|333596724|gb|GL892088.1| GENE 147 157284 - 158273 660 329 aa, chain - ## HITS:1 COG:RSp0044 KEGG:ns NR:ns ## COG: RSp0044 COG4977 # Protein_GI_number: 17548265 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Ralstonia solanacearum # 17 325 16 332 387 158 33.0 2e-38 MKTVFDSPEGEKSVPEKCLHIGLLLWPRYSLLAVSGLLEALRYAAKAQDKLAFKISLISE FPDIPIVSNAGIIMRPDSPHAPPDSFNYIAVIGGELQYLDLGHPGDKAYLTHAHHAGVPL IGIGTGSFVLAQEGLLNERRASIHPFHLDTFRQSFPLVYAEQGYDFIDDGDVLTCPGGIS TLTLATELIRTHAGDDIASTTCQRLSLVPHEIATPRPANLALIPDSRLRRAVMLIEQFLT RPLTTAGLAREVALSERQLNRLFHAEFGKTAREFIRSARLRYACWLLKNSQQSVTDIAQR MGFSDCAHFIRHFQMEYGCTPGVWRTSQS >gi|333596724|gb|GL892088.1| GENE 148 158408 - 158887 353 159 aa, chain - ## HITS:1 COG:no KEGG:ECL_00096 NR:ns ## KEGG: ECL_00096 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 159 1 159 160 209 62.0 2e-53 MTRFRQMLYIIVTGLVTAGVLMGYYLWHRSYVQPFSCQANLVQHHPDETLTVWLNYTFDG KYGTLSMNGRAKSDPRKTIDRKISFRVERKDHLYLLTSEKNMTFPDDNVEDSWLEKYEPQ FFVYPGKSIYMHINEQHNGNYIFTLGTLPTYVCRGSKKE >gi|333596724|gb|GL892088.1| GENE 149 158889 - 159677 269 262 aa, chain - ## HITS:1 COG:STM3759 KEGG:ns NR:ns ## COG: STM3759 COG3710 # Protein_GI_number: 16767043 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 5 258 34 279 285 127 30.0 2e-29 MHKHYIINNIVEFHPAASTLRDINNPDRVVVLNSPAGRCLLLLIDRAGSIVTQQEFLDIV WQSRGMLVSSNTYYQNISILRKGLKKIGFETDPIVTIPRIGLTLASDTQITVRESSPVAA QPAEEPCVEAPTIEEASTSSAPAAPVVRKHTRWLAVVLGLLIILAGAGVTGYMSARENRF VEDYRFAASVGACRVYLADDIQTHAERASALTYMEQFKAECVQYPWVYISWYALLPRASV IRCDRPMKEPNRCISDYFLKDS >gi|333596724|gb|GL892088.1| GENE 150 160513 - 161115 293 200 aa, chain + ## HITS:1 COG:no KEGG:ECL_00094 NR:ns ## KEGG: ECL_00094 # Name: not_defined # Def: two-component system, NarL family, response regulator, fimbrial Z # Organism: E.cloacae # Pathway: not_defined # 1 200 1 200 200 248 60.0 1e-64 MTNNTRITPHITVALMGGDHYARNGIKTLLSSVRSDLHINIIEGGYQELDKVLSSVRIDI LFISGAEKYHTGYDSLKYLKKIKAAHPEVIICLYSTSAHSLLWVREDIDAYISLQNTVYQ WRVKLAKMVDSHYRPQKQPAALSLTPGERRVLKELRNGLDIRYIAELEKLSYRRVSAIKS SAIRKLGLRNKTDLLVFLTS >gi|333596724|gb|GL892088.1| GENE 151 161169 - 161753 640 194 aa, chain + ## HITS:1 COG:fimI KEGG:ns NR:ns ## COG: fimI COG3539 # Protein_GI_number: 16132136 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 13 193 43 214 215 81 30.0 9e-16 MKARLTCHSLLAFSIAALLPAGSALAATTSGGTVNFSGKVVTSACAISAGSANIDVDMGE VRTATLAAAGSESSTAKAFSITLEDCEIADTSASTEDNPIAATTVAITFTGTPDSTDVNS LAAGVNGGAASAQHVAIRLYDEQGNVVRLGEPAAAIPLRAGENTLNFSAKYYSPLGNATA GDASAVATYTVTYS >gi|333596724|gb|GL892088.1| GENE 152 161807 - 162484 504 225 aa, chain + ## HITS:1 COG:ycbR KEGG:ns NR:ns ## COG: ycbR COG3121 # Protein_GI_number: 16128906 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 14 217 21 227 233 170 45.0 2e-42 MRVNTWICLAGTLCSSAVYAGGVGLGATRLIYAGATTQTMMQVRNTHPDATFLIQSWMED EKGSRTNDFVITPPLYVMKPASESAVKIMFSGNALPADRETLYWMTVKAIPQQVKNGSGN SLQFASANRIKVFYRPEGLRNGAGEAWKNLAGACRAGKVTLTNPTPYYLTTINLKIDGSP VPPVMVPPKASVTLADTFSHASSMSYQTINDYGAWTPVTRTTLSQ >gi|333596724|gb|GL892088.1| GENE 153 162508 - 165033 2549 841 aa, chain + ## HITS:1 COG:STM0546 KEGG:ns NR:ns ## COG: STM0546 COG3188 # Protein_GI_number: 16763926 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 19 822 32 849 870 592 41.0 1e-168 MKTKILCATVIALVIRHAVAAESELQFNPAFLNGERANSADLAWVNAGSALPPGEYNLNV YINTQFAFTGNVTFRVAENTPGEALPCLTPAQFAALGIDSRQAKGGELPPAQRCIFLTQS FADTQFDFDQRTLTLNFTVPQSAMRAVPRGYVSPESWESGIPAAWLNYVVNGANNDYRGE TRTREQQLFVSLNSGANLGAWRLRDFTTWTKESNELTHVQTWLQRDIRALRAQVYAGETF TSSQVFDAVGLRGIALKTDDNMLPASLSGYAPEVRGIARSNATVTVRQNGNVIYQTSVPP GAFVLKDLYPTSSGGDLAVTIQESDGSQTQYTLPFASVPNLVRNGQVKYALAAGKYRPAS NQIFPSFAQGELFLGWRYGLTFYGGAQFSDRYSGLAFGIGQNLGRFGAYSLDLTHARSQL ADNQHYTGDSVRLRYSKLLNDFGTRVNFFSLRYSTQGFYTLSDTTYKGMAGGAPEQTVED DGTVTTHYDTVYNLHMSRKAKNQLLLSQPMGEYGALSLSWDQQTYWNTSKTTQSLQFAWN ATFRNLSLGISAQRSSSLYDNKKDNILALSLSVPLGNPALSTRLRFTATHADPAGTTAST GLSGYLPGQENLFYSVNQRYSAQQHYGGDAALQYEGAWGDYNLGYSYAGGSRNLSYGMSG GAVLHEDGLTLSQPLGNTNILVKAPGASHVAVLNHKGIKTDSRGYAVIPYATPYRVNQVA LDVTTVGNDVELENAIANKIPTDGALVRATLTTRQGAKAMFIVRHAKDVLPFGTLVSSAD DKASGIVGDGGSVYLTGLSAKGTLHAVWGRNSTQRCTIRYALNSQNYHARTGLYSQEVTC Q >gi|333596724|gb|GL892088.1| GENE 154 165024 - 165542 508 172 aa, chain + ## HITS:1 COG:ycbV KEGG:ns NR:ns ## COG: ycbV COG3539 # Protein_GI_number: 16128910 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 22 171 38 186 187 93 34.0 2e-19 MSVTIRFLPLILLMFITVPVRGYDVLVSVTGNVIGNTCIVSEDSKEQNVPLGTLGIKQFS EAGAVSNIKTPFTITLEACGPTFAGVKIRFSGTPDDENPQLLKVADGGATGVAVQILDKD SVLIPLDTQTAAYGAAGDESVKMTFYARLAATGAPVTAGDVSAVATWTTEYQ >gi|333596724|gb|GL892088.1| GENE 155 165542 - 166549 912 335 aa, chain + ## HITS:1 COG:no KEGG:ECL_00089 NR:ns ## KEGG: ECL_00089 # Name: not_defined # Def: P pilus assembly protein, pilin FimA # Organism: E.cloacae # Pathway: not_defined # 1 335 2 337 337 437 78.0 1e-121 MRLLFLALFFMTSQAFALSWTSDITLSPTPMSWSGPADSIVPGKTIGSEWSATASVSEVF WCGLVFTCSKGTLEPSGSVTATGITVILDGATYRVFETGVPGIGFILGLKDYNGTTYVPM QTGITQSYPADGTNGYATGLGWSAKVTFIKTGVPLKSGVYQTPTINAAILTAYNNEVKTA QVIINPTTITVTASGCTVGTKSANVDLGNIDIHTLPAVGSTSPSGEFNVSLTCDENVAVN AVMTDQTTPSNTSSVVTLTGDSTASGIGVQFFYNGTGPLMMGPDSSAAGTTGQFFIQTTS SAQTLSLPFQAQYIRTGELVPGSANALASITFSYQ >gi|333596724|gb|GL892088.1| GENE 156 166551 - 167075 671 174 aa, chain - ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 1 174 1 174 177 244 65.0 6e-65 MRLWPVVTGVAIALTLVACKSPTPPKGVQPITGFDASRYLGKWYEVARLENRFERGLEQV TATYGKRSDGGISVLNRGYDPVKNKWNESEGKAYFTGEPTTAALKVSFFGPFYGGYNVIK LDDKYQYALVSGPNRDYLWILSRTPTIPDAVKQDYLNTARGLGFRVDQLVWVKH >gi|333596724|gb|GL892088.1| GENE 157 167193 - 167918 843 241 aa, chain + ## HITS:1 COG:STM1390 KEGG:ns NR:ns ## COG: STM1390 COG0789 # Protein_GI_number: 16764740 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 241 1 242 242 361 72.0 1e-100 MAYSIGEFARLSGITATTLRAWQRRYGLLKPERTDGGHRLYSDEDVQQALKILDWVKKGV PIGQVKSLLDRPAPRRANNWQTLQQAMLQKLQEGKIESLRQMIYDAGREYPRPELVTHVL RPLRSQISANVAAAMTLREILDGILIAYTSFCLEGDKKAPGDNILISGWYLNDPCEIWLE ALTRTGQGHRIDILPVPPAALAPEIFPDRKWLLVTSGKLTAARKKQVAQWQQQVSLEVII L >gi|333596724|gb|GL892088.1| GENE 158 168018 - 168428 601 136 aa, chain + ## HITS:1 COG:yedX KEGG:ns NR:ns ## COG: yedX COG2351 # Protein_GI_number: 16129916 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Escherichia coli K12 # 13 136 8 137 137 143 55.0 7e-35 MKKTLPLMMLAAMAFAPAAFSAPAGTLSVHVLDQQTGMPPADVAVTLEKQEQNKWTPIAS GKTDHDGRIKSLYPQDQDMAPGVYKVTFKTADYFHGKKLESFFPEVPVLFTVTRTNEKLH IPLLLSQYGYSTYKGS >gi|333596724|gb|GL892088.1| GENE 159 168531 - 169490 993 319 aa, chain + ## HITS:1 COG:STM1389_1 KEGG:ns NR:ns ## COG: STM1389_1 COG1683 # Protein_GI_number: 16764739 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 276 75.0 3e-74 MTTKPVLGISGCLTGSTVRFDGGHKRMGFVMDELAQWVTFRPVCPEMAIGLPTPRPALRL VMTTRGETEMRFSKAPHDDVTEKMAEFTANYLPKIGDLSGFIVCAKSPSCGMERVRLYDE NGNRGRKEGVGLFTAALLETYPWLPVEEDGRLHDPVLRENFVERVFALHELNVMRKNGLT RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWDDLEAFFVAYREKLMTILKKPASR KNHTNVLMHIQGYFRNQLNSRQRGELRDVILHYRDGLLPILAPLTLLKHYLAEYPDRYLM TQNYFDPYPDDLGLRLAVT >gi|333596724|gb|GL892088.1| GENE 160 169637 - 170725 1245 362 aa, chain + ## HITS:1 COG:PA0787 KEGG:ns NR:ns ## COG: PA0787 COG4637 # Protein_GI_number: 15595984 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pseudomonas aeruginosa # 1 361 1 374 387 255 40.0 9e-68 MIKNLHIQNYRSIRDMSLELEQLNIVFGPNGTGKSNIYKAIYLMHSAAQGQFSQALANEG GILKVFWAGKTRSDQLRRMNLAVETETYEYELQVGFVEKLPYPSQFQLDPVIKEESIWLS GQHRRPSSQLMKRKNQAVFLNNVHHEKVTHSGTLYENESVFGQLGEPHLYPEVSQMRESL RNWRFYHEFSVSSGSAIRAPQVGFRSPVLASDGANLAAAFQTIVEIGDELLLMRILDQAF PGCVFYSDNTGGRFRMMMQREGLSRPLEPAEFSDGTLRFLCLAVALLSPRPPAFIALNEP ENSLHPQMLPALASLIAEASRYSQIWLTSHSPELAHLIEKHRSFSLYQLSMAEGETRMER LG >gi|333596724|gb|GL892088.1| GENE 161 170754 - 171707 794 317 aa, chain - ## HITS:1 COG:ECs0399 KEGG:ns NR:ns ## COG: ECs0399 COG4977 # Protein_GI_number: 15829653 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Escherichia coli O157:H7 # 1 314 1 314 317 459 67.0 1e-129 MPLINVAIVAVDGFSPFHYSVPCILFGDTVSGEKRFNVTICAEKPGFLNSKDGFALHATQ DFSAIASAEIVVVPYWQHVLERPPQTLLDSLVQARDNGAEIVGLCLGSFVLGYAGILSGK RAATHWEFERQFQSLFPDVRLDINALYVDDGNMITSAGTAAALDCCLYIIRQRFGSVVAN QIARRMIVPPHREGGQAQFIAQPVPKDTRDGRINCLIDYLQQHISEPHNLDSLAEVVSMS RRTLTRHFFKATGMSVADWLTAERLRRSQILLESGNLPIENVAGQVGFLSAVTYRQQFKA RFGVSPAEWRKTFRTRQ >gi|333596724|gb|GL892088.1| GENE 162 171733 - 172512 789 259 aa, chain - ## HITS:1 COG:ECs0400 KEGG:ns NR:ns ## COG: ECs0400 COG2220 # Protein_GI_number: 15829654 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 259 5 262 262 353 65.0 2e-97 MNITQIRNATQLITYAGKRFLIDPMLAPKGTYPGFPGTARADIRNPMVELPVDVQTLLDA DAVIVTHTHADHWDQYAVELIAKDKLIYVQNDSDAALLRSQGFTNLTIMTGETTYGDIRI VKTHGGQHGTDRAYAVPELAEFLGEACGVVFRHPDEKTLYIAGDTIWRDAVAADLQKHQP DIVVLNAGYAHVIGFGPIIMGEEDLLNVHFLLPQAKIVATHMEALNHCLLTRRALREYVD ANEAGDAVSIPQDGETVIF >gi|333596724|gb|GL892088.1| GENE 163 172602 - 173852 1210 416 aa, chain - ## HITS:1 COG:PA4142 KEGG:ns NR:ns ## COG: PA4142 COG0845 # Protein_GI_number: 15599337 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 46 407 43 411 418 89 23.0 1e-17 MKLKNRSRQRRALIPHHFSKSYHINAPRLKTVLTLFIAFFLCLLVFAIVFNFSETTLARG VLIPAQGDVEVRARESGTLVDFAVRPGQYVKENDPLFTVSQDYGGKQGSVVQFDRQQMEA EKKRSEQRIQAIEDSIASYRKNLAQQLTLTDKQIAVSRDKVKKLRALLKNSTDTYEAWKS VSGKGYVSKVDLDKSHNDVLNAQLNLTLEESTILELEARKTSLTDSTQSQIDSLSEEQLY VKNRISEIDRNLSSRGSSTMAMLAPSDGYVVAINFPPGRAITQNSEVVVVIRKNTAATME GYLYVPATGVGRVAKGDKVKLRFDSWPVDKYGSVEATLSDFYEVNIDAHSALIPLQEGQN YYLAKVRVPSWFTDPDKKKRMLMGGMTVNADIVIDRKPLINLLIAPLERVRKRFID >gi|333596724|gb|GL892088.1| GENE 164 173859 - 174608 735 249 aa, chain - ## HITS:1 COG:no KEGG:ECL_00078 NR:ns ## KEGG: ECL_00078 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 249 1 249 249 414 84.0 1e-114 MMLLPRLYARLCARQAGRTLLANRITQNYSQFMRCPEADVPADFLHQNAHELSGFNFVEQ IFPPALWARNVLFDLHGYVAQWTQEQAFYSSSRTLLLGMRWAGFGLMMDALLATAPDDVR FQFITRYPALHKLMAAHEGRRASSFFAPHRLVTVLLVDERLPEAPLFPTQAGDQKAWLTD VSTRFLSRYGYSVRTLLPVCSLHAAEFGLESQAYAPEDYRLAATDTLNALRKTPTLWSAW DDLSVIYHG >gi|333596724|gb|GL892088.1| GENE 165 174605 - 176701 207 698 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 487 697 9 223 223 84 29 4e-15 MFSLFQYKKQGKTPVIRQHEFTECGLACLAMVLGHYDHHVSVSQLRREIAVSADAGTSMA ELMTLASDKNMSGRVLKGEITEIDTSELPLIAFWRGNHFVVIVKIDSRSVTVHDPASGVR RYRLKEAEKLFSGYVLELKPTPCFEKKSPDEKLTLGRLANKSPSLFQRQLLLFVLCIFTL ITMLASPTYVQLIMDEAIARSDSDLVILLTAIFAIVFIFEVIGKFLKQLLEILMRNIAYD DLSQSVRHYMLRTQTSWFRSRPPGIVLAIEKSLHACAEFISNGYVQILFSSLIAVTSLLF MLLYNVKIALLTMLLMGVFFLIRFSLIGPYQRAVDDSIERTAQYESLLVETQKGIITLKA NNMEQARDAVMDKSQREHIAGLMRKERLLARFDVASLLVINAEQLLVVCFGAWLILEGQM SIGMLYAYISYKRYFSDAMVQVAQKLLDKNALKGPLDRVGDLLFAPSETSQFGKRIVTSP VCLQFEDVSFAYPGREATLQHINMTLKQGEEAVIVGQSGSGKTTLLRLISGMLLASSGTL RINKIPIEECDLSSLRQHIRIVHADDILFTGSILDNIACFDSAPDKEQVIAACRLAEVDH VVARLPHGYETEMLPGNTFFSAGEMQRLVLARALYSQPKLLLCDEVTANLDKTTAQKVLA NLRSLGIGLVFVTHSPDVVGCHGRLYTMENGTLRENAP >gi|333596724|gb|GL892088.1| GENE 166 176769 - 176954 335 61 aa, chain - ## HITS:1 COG:no KEGG:ECL_00076 NR:ns ## KEGG: ECL_00076 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 61 1 61 61 62 98.0 8e-09 MQVIDFKKAQAIIGGWDPFAAAIQGASAGYNAGSQMLGALGGTIGGVFGLVGGFIGGFFS A >gi|333596724|gb|GL892088.1| GENE 167 176978 - 177172 329 64 aa, chain - ## HITS:1 COG:no KEGG:ECL_00075 NR:ns ## KEGG: ECL_00075 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 64 1 64 64 62 96.0 4e-09 MKAISFTEAKDIIGGALNPFAGLVKGAQLGYDTGASIMGMVGGVVGGVLGGAMGFLGALV GSYN >gi|333596724|gb|GL892088.1| GENE 168 177246 - 177899 358 217 aa, chain - ## HITS:1 COG:no KEGG:ECL_00074 NR:ns ## KEGG: ECL_00074 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 217 1 217 217 399 89.0 1e-110 MTGKFLAIFAINCFISTGANALIIESLNIDFLPEREVVFQPIKNDTSERQNYTVSLIQVD VPKEKGKETEIKDGEVMYSPKQLTLGSGERAGFKFYYTGPHDNKERYYRVKFTETPLQAK VITRKGQRIQSDVVVSLEAILIVRPWTRHFDYAFSNGVVSNTGNTYFKYVSSVGCSTQYN NSKYIPPGQRLEIDNAGQAARRMIIYGNKIIPLTTCP >gi|333596724|gb|GL892088.1| GENE 169 177906 - 179504 1726 532 aa, chain - ## HITS:1 COG:no KEGG:ECL_00073 NR:ns ## KEGG: ECL_00073 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 532 3 534 534 913 91.0 0 MKKIFALNLLLMSAAAQAQELPYFAINNPDNNGTGNSAGLFSLNSTSTAFLHGSREWPTL SAKANNGIATYIPDNSYSGPAGSALTIDFSVTGSSASPFFKGTACSSSCGNTGYTPTTSY TDTSMVVKPPVMEPGTSYGRWVLGDPFFNYLLNAAPGDEVTITSTPQISSINKVTTTNTL HKVGTLTMTNARALNLGIDPISGEVTIVDGSTGATCTKYTRNTVSGVLCDLLEYTFVGED ISGYNGGLALTSSRVNSVLQSHMSGGTGLAAELTFDENTWYSISGGILSDTRVLANTFLA APQKNGGKASLKIFLPKALILSVAQAGDGSNIGNIVSLCLTPGNSSLAADFCFQPGGGLV INPIEPGLEIVPDNPDYTLDPDGLGGSGKGIIGEAPIEIPYTITYSGAQKDAAIAVTVKV TGPTQSLNGVDYCAFSGNGFTVPIPGNVLVGKSQTLMAHNCKGDVLSIPAPATHAEEWDK MSSGVTDMWLWKTPLILQFVMDNPVSKTTYDGNSWFGEVTAQGRIDVSASWN >gi|333596724|gb|GL892088.1| GENE 170 179482 - 182046 3062 854 aa, chain - ## HITS:1 COG:no KEGG:ECL_00072 NR:ns ## KEGG: ECL_00072 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 854 11 864 864 1537 91.0 0 MMACASGTLPALAHAASSSVVIANYRFPDSLYALLEQGIKIPVYLVNTRPHSAQQGNREG TASKYVRIGDVTLFAKDLKLGLRDVQVQESDNGIRLSKEMRTLLQSINDKQFDDQMRIPV SAGSAFELDQKKMRLLLNLSRSDYGVNIRPREVDIDAPESDDLSGTFSYNLGAYHTESGY GDSWSSGYLNARNWISMGVDHVLIDGSGYVNKSSSDTQMNAVMWERDYQGMRYAAGMLNG WAMQSLASVSGISGGEVYGVSMGNQANSRKRDNTLSLTPVVVYFPTAGEARIRRDGQLIG IQRFDVGNHEIDTSSLPYGIYSIEVEVVSGSRTVSRSMYTVNKPFSSNVSETLRWQMWGG MYSRDKSVVNYKKYAKRKNEQDNTYYYDYDTKHKDTMSLVGASFSKRSGMVDWNASTYMM REHIVSELWASLSLTDSFSVNTQTMAASDGTYRANYGANLSLPWQIGSVWYSHEQLSSGK FLDIYESKGNTWGASFSLPSFGLPSAGNLSLMRQEDDLYRYKRYQLDYSQGLYAGRYGTA RLRVGMSRNKYDGYYEEKDRYVMLDFAIPLGNTVSVGVSHNRDTGTALNVSASRQFEGDY LKSATANVSKAFNSRQDRSVSGGGSVNFDTPWNSNILSVQSGMSKGWNSTLTSDGSVGWS KEAIAAGKGTESAGVIVSTGLKSDEALTLKLNGRAERIKGDKTWLSLPAYQAYDLEVMNS ETGTESYEIGANARRHITVYPGNTVVMKPQVKKIVTLFGRLVDANGAPIGAMQIKNHVGL TRTENDGRFVIDVDKNNPVLSIATPDDSVCEVRLDIESNRGALWLGDISCDKGDFVWQEA KGTQERDDEKDIRS >gi|333596724|gb|GL892088.1| GENE 171 182083 - 182760 637 225 aa, chain - ## HITS:1 COG:no KEGG:ECL_00071 NR:ns ## KEGG: ECL_00071 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 225 1 225 225 389 86.0 1e-107 MFNLKSAFLFLLFISSSALAINVGKVTTIIPADADSTAKEIKNEADSVRIVSVRAQRISS PMDEGIVINPEKVDELLLTPTRMVMPAGTSNIVKFYYHGNADNKERYYRITFTDEGVSEE VDSGSPKNGTGMTRAVVSTILVVQPRDKKIDFVYVAGKITNKGNTSFRVNATGTCLKPNP ESPTTPCSKNFYLMPETSRAIEDINVTDNHFHLGIWDLKQFIPVK >gi|333596724|gb|GL892088.1| GENE 172 182806 - 183429 857 207 aa, chain - ## HITS:1 COG:no KEGG:ECL_00070 NR:ns ## KEGG: ECL_00070 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 207 1 207 207 260 90.0 3e-68 MNKLNAIVLGSLLSVSALSAVNAAETTASATWQATATKDSESDLVVTPTRALNFVYSANT KSFNTDTGLFDVAIRGDHSTATSFKLEAILDDSNNTLFSVGGEATKLKVGARWGGNDLGS IGGTVGAKSTAWTTLVDSSSNTGVSSGLWNLTTSAGAVADTEITGQDKFVFYVDSAQDNA GTAKEFKDLTNSLWEGTVSVAFRATWG >gi|333596724|gb|GL892088.1| GENE 173 183657 - 184127 507 156 aa, chain - ## HITS:1 COG:no KEGG:ECL_00069 NR:ns ## KEGG: ECL_00069 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 19 156 24 161 161 209 73.0 3e-53 MSVMFSIVLVLSVIVLLWVYFTRTQDEGFGCQSDTISWKTYSTGESTDMSLTTLFLFNNK DIVTVIHKGVLKKEGKSYLIDRNYTLSVEKVDGSNIFYIKDKKLNKSEDDAAPDGVVNEM LLDNINFFYITSVKEHAWLIKGLVLPVMMCVAVPTS >gi|333596724|gb|GL892088.1| GENE 174 184146 - 184958 418 270 aa, chain - ## HITS:1 COG:no KEGG:ECL_00068 NR:ns ## KEGG: ECL_00068 # Name: not_defined # Def: putative transcriptional regulatory protein # Organism: E.cloacae # Pathway: not_defined # 1 270 1 266 266 386 70.0 1e-106 MKYLIDLTMLYEVDTGMIMINGEEESSIKLSNQAGRLLYELIINNGKTLDRDDLIKKVWE DHGFSGSSVSLNVAVSEIRKAFRTLGCDPLLIKTIRGKGFSLAAHIEHHTVRPPVVSTPG EHSAAEAFATVAHKKDADPPKRILSLHTLFISLCTLLLITVIGTAVLLLHQRDSYAESLK DSDMHLLGKVDRCTVYLIDKNMYQPRQHYFNHVKEVIASQHIDCQHQVADAYYSRFKKSQ IENYFLAICYQQDSIDDYKNCISYRSLTGS >gi|333596724|gb|GL892088.1| GENE 175 185321 - 185917 698 198 aa, chain + ## HITS:1 COG:no KEGG:ECL_00066 NR:ns ## KEGG: ECL_00066 # Name: not_defined # Def: putative fimbrial protein # Organism: E.cloacae # Pathway: not_defined # 5 198 1 194 194 253 92.0 4e-66 MEFIMFKSIMTVSLLAAAIASTSAVAADNSAGGIINFTGAITDTTCTINGGKSADFTVAL SPISVKDAGTTVGLITKNKKSIALTFSGCTPAAGTTGTPLKVYFSSADNISTDGKYLVNN SVNENDASVARNVGFALVEPGSSTPITLNQAYTTNIMGTATAPDSETLTLDVYYYKTNAA AATVGELSSNVTYTISYL >gi|333596724|gb|GL892088.1| GENE 176 185970 - 186662 487 230 aa, chain + ## HITS:1 COG:ZyehC KEGG:ns NR:ns ## COG: ZyehC COG3121 # Protein_GI_number: 15802589 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 19 222 34 235 240 175 43.0 8e-44 MRKAILLAGLLLSTGHSWANIVINGTRVLYPENNKEVIVQLMNTGDAPALVQSWIDDGDI NSTPETANVPFLLSPPVIKVDEHNGQQLRIKKLPSSLPADRESVFFLNVLDIPPKPENLQ NQNTVQLAIKSRIKLFYRPAALKGTLDDAVAKLTLAADGDRFRITNNSPFHITVANISLG KTKLLQESPMVSPFGQLTVATKNTVKHGQTFQLMYVDDLGAYKTRTFTSQ >gi|333596724|gb|GL892088.1| GENE 177 186678 - 189170 2634 830 aa, chain + ## HITS:1 COG:yehB KEGG:ns NR:ns ## COG: yehB COG3188 # Protein_GI_number: 16130047 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 12 816 10 812 826 514 37.0 1e-145 MKMKQNRLCLLAVCTLLLSHKSGAVSFDPSLLAGASGESDLSRFSENNVMPAGSQEMDIY VNGSWKGRYTVIYGEQRDDIRLAWKDAQSLGINTASVPAPAIAHGQVQLRDLVQGGEVKT DTSTLSLALTVPQAAVLRTEEGYIAPQFWNEGIPALMLSWNTTWYNTHSKGTAKDTNDDF YAGLDSGANLFGWQFRDSSAWRKSASGESQWQNNTRYLRRPLASLKSNLTLGDFYIPGDL FDSLRVRGVSLASDMKMRPNSQQGFSPVIHGVARTNALVKVIQNGNVIYQENVPPGQFTL DSIQPTGSAGDLLVVVREADGSQQSFTVPFSAVPGMLKEGVSQYSVVAGKVHQNTLDAEP AFMQATLRYGFNNLITGYTGTIISDNYQAGLVGTGWNLPFGAVSFDVTHAKTTLQDRTSS GQSYRVSYSKFIDTTATNFTLAAYRYSTKGYYSFSDALYSREGYQRLRAQYDDYEDRFGV APDMSLSTWDALRAAQPKNTFTLNLNQRLLNNWGTVFVSGTQRDYWNSQQTTREYQMGYS NAIGRASYTLSASRVRNKDSEEETRLYLSLSLPFSLFDNNAWITSSLTASDSHYEQSNIS MSGNALASNRLSYTLSGSNARGGKNAASVNAAYRSNFATLGGSYSESSDYRQTGLSGRGS LVAYPWHVLASNETGTTMTIVDAPKAEGLMVNGDESIMTNRDGVALVPYATPYRKNAITL TQTENSAGAEVIGNMANVAPYDGAVSYIRFETDKRQSWVLHATRADGKPLPFGTEVLDEH GGSVGYVGQASVLYIRAEQPPRALNVHFRGGKCEISAPAWGLNSPSSVCH >gi|333596724|gb|GL892088.1| GENE 178 189186 - 190250 958 354 aa, chain + ## HITS:1 COG:no KEGG:ECL_00063 NR:ns ## KEGG: ECL_00063 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 354 1 354 354 529 82.0 1e-149 MLRSFIFLLLTSISGMSYATCSGSSIVYGTPITIDLSDKLSPATPTWTGSFTTQYSGSFN CTTGNSEFSYTPILSTDSKYATILGFSNNKYMVRAEITNPPANKTLSASGSHTASELNTP FTVRFTLVNQSGTTLTGDTANMSDVLFVSDMSGLSILEIILWPINQVIKIAQWLFSGFKW PYDNRDMFGQPMIIKYAPKLTTCSFDNAGLTVALPTLGIPQLSASSQPGLTPFSLNMSCQ NVGVNGNSDRAIEMFLSSTQLLSTDSSVLIDSSSSAAQGVGLRLIKRDAPQTPVTFSTST TNRGNATMIFSVAAGAALDEHFTLPMAAYYYVWAPDQVSQGKINTSATLNIIYP >gi|333596724|gb|GL892088.1| GENE 179 190257 - 190922 353 221 aa, chain - ## HITS:1 COG:ZrcsB KEGG:ns NR:ns ## COG: ZrcsB COG2197 # Protein_GI_number: 15802770 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 EDL933 # 101 216 93 208 216 72 37.0 5e-13 MNNTERIVRVMVFYKINIFKEIIFRALQDLLPDYVLNITQVDSTEQALAAVADNNVDVFF TEFNYLLNHKEWSAEVSSRFTSLCKTHHVRRVLLVPELPYGLLKKVLEMKFELTISQQDE LTELKKELPALLMADGQKPSVSSWLRRVMRSGSRARSILSAREWEVLHLIVEGFSTTEIA RHRNRSVSTIATQKHNAMKKLNLSNHSELIKYVQTVGKMEE >gi|333596724|gb|GL892088.1| GENE 180 191463 - 192083 401 206 aa, chain + ## HITS:1 COG:no KEGG:ECL_00060 NR:ns ## KEGG: ECL_00060 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 4 206 2 203 203 333 79.0 2e-90 MQNKKTIHVAVIDSCEFTMIGLQSLGKREPDEKHDVIFHGFTHIEELAMSEQPFDIIIYD PLNTRHFRVTTNDDILCIKQKQATAKIYIYSLSAGYLKFKHVDGVISKRVSLGDIKALWQ ILMSQTPQESGRYNVGMTTRLRTPARLSSEEASVLRGYSCNLKTKQIARQLGCNVRLVYF YKNNAMNKLKAVRGPSFYQSIRWILN >gi|333596724|gb|GL892088.1| GENE 181 192159 - 192839 426 226 aa, chain + ## HITS:1 COG:no KEGG:ECL_00059 NR:ns ## KEGG: ECL_00059 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 226 1 226 226 307 70.0 2e-82 MYTVLPSPLLQRISGLRFQPLVDLHSGQVFAHEVLVEIHNVNLEVLFASLPSRSALQIFF WQANTLLQIPGRDAYWLNLPAEHLLDERAIRLLLALRHQQRLTIEIQDPLTITRLSEAEQ CRLHATLVRLKEAGWQIWLDDLTRELAETFTRLALPLDGVKIDRSALRERAPLAPFVREI RAGIAQSILTEGIENSRDLARARASGAQSGQGFLWPESRTDARVTL >gi|333596724|gb|GL892088.1| GENE 182 192873 - 193805 990 310 aa, chain - ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 62 310 24 272 272 452 88.0 1e-127 MLAICLAVLRFSYNLTVLLIPFRFLACRLVVDIVFKTSIKRNCLVKLQLGALLLTGLLLA GCDQSGNDARHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNQGEL DANVFQHRPFLAQDNKAHNYKLVAVANTFVFPMAGYSRKIKAVSELKDGATIAIPNDPTN LGRALLLLQKEQLITLKPGVGLLPTVLDITANPKNVQIMELEGAQLPRVLDDPKVDVAII STTYLQQTGLSPVHDSVFIEDKNSPYVNIVVTREDNKDAENVKEFIQSYQSPEVAEAAET IFNGGAVPGW >gi|333596724|gb|GL892088.1| GENE 183 194055 - 194528 -69 157 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDQGINDFISICDVVKKRGRKGGRQPYSNKLSISQTCRRINDQQVRFMNINIPEDIMSK ARLKKGDRIDIAFTANGMKWRLKVVPNGEQGYSITTPSTNSKRGQIRLTWCEGIPIIGGD EAIRKARAIAVEETMRVSPAELIFELGEISVEAKRES >gi|333596724|gb|GL892088.1| GENE 184 194597 - 194989 359 130 aa, chain - ## HITS:1 COG:SMa0981 KEGG:ns NR:ns ## COG: SMa0981 COG1487 # Protein_GI_number: 16262982 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Sinorhizobium meliloti # 2 128 4 132 139 102 46.0 1e-22 MLHMLDTNIVSHLVRQHPEVVNRYSQITPEKMCISSVTEAELLYGVAKKQNNKLHETIME FLKTITICAWDSEAAATYGELRAAMEKKGKVMGDLDQLIAAHAISRGTTIVTNDHAFGMV QDLTVEDWTQ >gi|333596724|gb|GL892088.1| GENE 185 194993 - 195253 191 86 aa, chain - ## HITS:1 COG:no KEGG:Spro_3559 NR:ns ## KEGG: Spro_3559 # Name: not_defined # Def: SpoVT/AbrB domain-containing protein # Organism: S.proteamaculans # Pathway: not_defined # 1 85 1 85 87 86 55.0 3e-16 MERTAKLFKKGRNQAVVLPAEFAFETESVYIRRDDEGNVVLTARSEKERHRDNFLRMLRQ THVPDTFLSKEERNQSYTTRNPLEGL >gi|333596724|gb|GL892088.1| GENE 186 195371 - 196870 2109 499 aa, chain - ## HITS:1 COG:Cgl0377 KEGG:ns NR:ns ## COG: Cgl0377 COG0477 # Protein_GI_number: 19551627 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 19 496 46 539 544 348 41.0 2e-95 MESDVMTQPAKNAPSIKLLFSALLLVMLLSALDQTIVSTALPTIVGELGGLDKLSWVVTA YILSSTIVVPLYGKFGDLFGRKIVLQIAIVLFLVGSALCGLAQNMTQLVLMRALQGLGGG GLMVISMAAVADVIPPADRGRYQGLFGGVFGLATVIGPLIGGFIVQHASWRWIFYINLPL GLFALLVIGAVFHGSARRSKHEIDYLGAIYLSMALLCIILFTTEGGTIRQWSDPQLWCIL AFGLTGIAGFIYEERLAWEPIIPLSLFRDRSFLLCSLIGFIIGMSLFGSVTFLPLYLQVV KDATPTQAGLQLIPLMGGLLLTSIISGRIISRTGKYRLFPILGTLLGVVGMVLLTRISIT SPTWQLYLFTGVLGMGLGLVMQVLVLAVQNSVSADQYGVATSGVTLFRSIGGAIGVALFG AVFTHILQSGLIDRLPEGAQLPRELNPVAIHHLPDALRLDYLDAFGSAIHAVFMLAAGIM VLAFVLSWFLREAPLRRQA >gi|333596724|gb|GL892088.1| GENE 187 196949 - 197596 753 215 aa, chain + ## HITS:1 COG:RSc0162 KEGG:ns NR:ns ## COG: RSc0162 COG1309 # Protein_GI_number: 17544881 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 26 214 6 203 233 91 34.0 9e-19 MPAQKDNSEPRRPGRPRGGKRVTASREQLLDIALNLFSRQGIANTSLNAIAREAGVTPAM LHYYFNSREQLLDAMIEERFLPLRERIGAIFADNRDSPVDALTEMVRVLAELAEKYRWFA PLWMQEVIGEMPVLRTHLQARFGDEKYHTTLATIKSWQQEGKLNPALAPELLFTTLLSLV LVPFSRMRNDERLSALSPEIVVRHVLAVIGTGIGG >gi|333596724|gb|GL892088.1| GENE 188 197593 - 198012 588 139 aa, chain - ## HITS:1 COG:STM1857 KEGG:ns NR:ns ## COG: STM1857 COG0454 # Protein_GI_number: 16765198 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 137 1 136 139 171 62.0 3e-43 MHLITTENVTLQEKEELLTGLRAYNAQFLDLATFGGDIGVYMRDDNGVMLGGLIGVRKGD WLNIDYLWVSDSVRGTGVGSQLIKTAEEEARRKGCRHALVDTVSFQARPFYEKQGYQVQM SLQDYPYQGMQRHYLTKNL >gi|333596724|gb|GL892088.1| GENE 189 198150 - 198446 380 98 aa, chain + ## HITS:1 COG:no KEGG:ECL_00052 NR:ns ## KEGG: ECL_00052 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 98 1 98 98 131 91.0 1e-29 MKSAHLVCLLVCLIFAAFVHAQEKSAPEKEAQIKQQVLKDVKKTCTPQKKQSDKAWQAMI LSSEANQLLIKNAITAVKRDNLDAYWDAVSQVDCMEDY >gi|333596724|gb|GL892088.1| GENE 190 198494 - 199444 1065 316 aa, chain - ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 274 2 290 340 108 31.0 2e-23 MSTINDVSRLAGVSKATVSRVLSGSRGVKEASRQAVLKAVDELNYRPNVIAQSLLSQSTG CIGVICAQENINQTTGYLYALEKHLSQHQKHLLLRFAHTKTEVMNALEELSCGLCDDILV IGARFPLDVDMDNVILVDCMEADNANSIQFDHAFAAETACNYLTSQGRRQIALIHPHGSG FADQVLLGYKHALEKNFLPFNRNLVFMDATSSSVALQELLNNATTLNFNALLVADEQEAQ RVIPQLQAFNKSVPEDIMVFSLGGSLHLPGIPVIPAIEYSMDAMAARIVTWLTEKTQMLG SYVLRGDLIIPDVRKR >gi|333596724|gb|GL892088.1| GENE 191 199738 - 200052 293 104 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 90 49.0 6e-19 MFKIMLCCSAGMSTSLLVSKMVDVAKERGLPVKIDAYGVSEFDTQFPHYQVVLLGPQVKY MLKTLSEKAATQGIPVQPIDMMDYGMQRGDKVLDYALSLIEAAH >gi|333596724|gb|GL892088.1| GENE 192 200064 - 201389 2009 441 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 4 437 6 438 446 423 47.0 1e-118 MSSLYQSMVAVIEQSITPLAAKLGQQKYVIAIRDGFTAALPFMIIGSFMLVFIFPPFSAD TTNSFARGWLDFSETYREQLMLPFNLSMGVMTFFISVGIGASLGRQFNLDPVMSGLLAFM AFLLVAAPYADGKISTQYLSGQGIFTALITAIYSTRVYAWLKQNNVTIRLPKEVPTGVAR SFEILIPVMVVIGTLHPLNLFIEAQTGMIIPQAIMHLLEPLVSASDSLPAILLSVLLCQI FWFAGIHGSLIVTGIMNPFWMANLSANQAALAAGAALPHVYLQGFWDHYLLIGGVGSTLP LAFLLLRSRATHLRTIGKMGIVPSFFNINEPILFGAPIIMNPMLFIPFVFVPLVNACLAY GATKLGWLAQVVSLTPWTTPAPIGASWAANWALSPVIMCLVCMVMSALMYLPFLRAYERT LMKNEEQKAQATVGNAEAASN >gi|333596724|gb|GL892088.1| GENE 193 201407 - 202783 1709 458 aa, chain + ## HITS:1 COG:STM3775 KEGG:ns NR:ns ## COG: STM3775 COG2723 # Protein_GI_number: 16767059 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Salmonella typhimurium LT2 # 1 456 1 460 460 816 82.0 0 MKYAFPDNFWWGSASSALQTEGTREGETTWDYWFAREPNRFHNGVGPQHTSTFYQHWKTD IQLLKQLNHNSFRTSISWARLIPDGIGEVNPDAVDFYNQIIDELNEQGITPFITLFHFDM PMAMQEIGGWENRDVVEAYARYAQICFELFGDRVLHWFTFNEPIVPVEGGYLYDFHYPNV VDFRRAATVAYHTVLAHAKAVQAYRAGHYAGEIGIVLNLTPSYPRSQNPADVKAAHIADL MFNRSFLDPVLRGEYPADLVALLKSYDQLPACKPEDGFLIAEGKIDLLGVNYYQPRRVKC RDSAVNPQAPFMPELFFDNYEMPGRKMNPYRGWEIYAPGIYDILVNLRDNYGNPRCFISE NGMGVENEQRFIENGQINDQYRIEFISEHLAWLHKGISEGCNCLGYHMWTFIDNWSWCNA YKNRYGFIQLDIETQQRTIKKSGEWFAATALNNSFDKE >gi|333596724|gb|GL892088.1| GENE 194 202789 - 203091 366 100 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 100 16 113 115 87 51.0 4e-18 MIALEEAVMEIIVNAGQSRSLCFEALHAARQGNLDEAKSLLREADGYARQAHKMQTKLIE QDAGEGRQPMTLIMVHAQDHLMNSLLARELSEEIIHLYQR >gi|333596724|gb|GL892088.1| GENE 195 203228 - 204607 2046 459 aa, chain + ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 79 459 24 423 423 85 26.0 2e-16 MNTIKKLPLTMAVIAALCPISVLAQEFTQEQIDAIVAKAVDKALAERQAKMDAAVAKKAD VVTEPQSAAQSPDMAIPFGVKFTGYARYGAHFQAADQKYVAVDGSYNGASAIGRLGNEGN GGEFQLSKAFRGDNGAIWDINVMIDHWGDEVNLKKAYAGVTNIMASNPNAYFWAGRDFHQ RPQQGINDYFWMNHDGQGAGVKNFDIGGVQFDVAAVAAVESCSPEVMEDEANPSRITCTG GSGTGDKGNYAATSKIHGMKLGPIDMELYANYGFDSKAVESDERLNAWQGGVVLSHTNDS GVNKVIARYSDNADNSVFNKTEDLTTVYASFEGLYKFTQATQVEYILAFHDYDNSRDKTD NRKNYNAIVRPMHWWNDVHSTWLEAGWQHVDYDNGGDNKGWKLTLSQNMSIAMGPEFRPM LRFYVTGGKVDNERTARVNNTKDETLDDFNVGAMWEAWF >gi|333596724|gb|GL892088.1| GENE 196 204742 - 205647 997 301 aa, chain + ## HITS:1 COG:ECs4594 KEGG:ns NR:ns ## COG: ECs4594 COG0697 # Protein_GI_number: 15833848 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 298 1 298 307 416 84.0 1e-116 MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEKSHISSPYLTMVRLLFTGVILLTLSFVHGD KIFSVIKNRKDAISLLFFSLAGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALA RKTRPGIFVLSAIFTSLIGTFLLVTHGDPTSLSISPAALFFGIASAFAAAFYTTYPSTLI ARYGTLPIVGWSMLIAGLMLTPFYAGRGTTFVIDGGLLLAFFYLVVIGTALTFSLYLKGA QMIGGPKASILSCAEPLSSALLSVVLLGVAFTLPDWLGTLLIVSSVVLISMDSRRRVKAS A Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:44:33 2011 Seq name: gi|333596723|gb|GL892089.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD4, whole genome shotgun sequence Length of sequence - 111400 bp Number of predicted genes - 130, with homology - 129 Number of transcription units - 59, operones - 31 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 266 199 ## HCM2.0046c hypothetical protein - Prom 323 - 382 4.7 + Prom 384 - 443 3.6 2 2 Op 1 9/0.000 + CDS 633 - 902 221 ## COG4453 Uncharacterized protein conserved in bacteria + Term 953 - 992 0.1 + Prom 984 - 1043 2.0 3 2 Op 2 . + CDS 1080 - 1430 255 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 1432 - 1468 4.9 - Term 1422 - 1452 3.0 4 3 Op 1 . - CDS 1457 - 1681 182 ## HCM2.0048c hypothetical protein 5 3 Op 2 . - CDS 1614 - 1826 137 ## gi|309797675|ref|ZP_07692062.1| hypothetical protein HMPREF9348_04912 6 3 Op 3 . - CDS 1867 - 2559 695 ## HCM2.0049c hypothetical protein 7 3 Op 4 . - CDS 2573 - 2896 406 ## HCM2.0050c hypothetical protein 8 3 Op 5 . - CDS 2971 - 3693 48 ## gi|311993250|ref|YP_004010116.1| gp38 distal long tail fiber assembly catalyst - Term 3774 - 3819 5.2 9 4 Op 1 . - CDS 3826 - 8007 1389 ## COG1511 Predicted membrane protein - Term 8013 - 8041 1.0 10 4 Op 2 . - CDS 8088 - 8705 509 ## YPDSF_4033 hypothetical protein 11 4 Op 3 5/0.000 - CDS 8723 - 13354 3628 ## COG4733 Phage-related protein, tail component 12 4 Op 4 6/0.000 - CDS 13376 - 13927 340 ## COG4723 Phage-related protein, tail component 13 4 Op 5 6/0.000 - CDS 13960 - 14748 428 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 14 4 Op 6 5/0.000 - CDS 14741 - 15439 536 ## COG4672 Phage-related protein - Prom 15464 - 15523 2.5 - Term 15450 - 15484 5.1 15 4 Op 7 1/0.500 - CDS 15529 - 15864 260 ## COG4718 Phage-related protein 16 4 Op 8 . - CDS 15906 - 20477 3833 ## COG3941 Mu-like prophage protein 17 4 Op 9 . - CDS 20485 - 20709 150 ## YPMT1.12c hypothetical protein 18 5 Tu 1 . - CDS 20835 - 21152 482 ## YPDSF_4041 hypothetical protein - Term 21163 - 21193 1.9 19 6 Op 1 . - CDS 21212 - 21958 963 ## COG5492 Bacterial surface proteins containing Ig-like domains 20 6 Op 2 . - CDS 22033 - 22338 285 ## HCM2.0061c hypothetical protein 21 6 Op 3 . - CDS 22418 - 22891 409 ## HCM2.0062c hypothetical protein 22 6 Op 4 . - CDS 22882 - 23226 183 ## YPMT1.17c hypothetical protein 23 6 Op 5 . - CDS 23324 - 24157 790 ## HCM2.0064c hypothetical protein 24 6 Op 6 . - CDS 24157 - 24591 460 ## HCM2.0065c hypothetical protein 25 6 Op 7 . - CDS 24635 - 25558 639 ## COG5492 Bacterial surface proteins containing Ig-like domains - Term 25565 - 25597 4.6 26 7 Op 1 . - CDS 25633 - 26508 1134 ## HCM2.0067c hypothetical protein 27 7 Op 2 . - CDS 26535 - 27431 804 ## HCM2.0068c hypothetical protein 28 7 Op 3 . - CDS 27447 - 29027 1360 ## HCM2.0069c hypothetical protein 29 7 Op 4 . - CDS 29061 - 30317 1020 ## YPDSF_4052 hypothetical protein 30 7 Op 5 . - CDS 30320 - 30961 566 ## YPDSF_4053 hypothetical protein - Prom 31062 - 31121 5.9 - Term 31065 - 31131 6.9 31 8 Op 1 . - CDS 31157 - 31423 392 ## YPDSF_4054 hypothetical protein 32 8 Op 2 . - CDS 31433 - 32323 876 ## COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain 33 8 Op 3 . - CDS 32329 - 32583 213 ## HCM2.0074c hypothetical protein 34 8 Op 4 . - CDS 32576 - 33214 812 ## COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain 35 8 Op 5 4/0.000 - CDS 33211 - 33879 761 ## COG1475 Predicted transcriptional regulators 36 8 Op 6 . - CDS 33879 - 34577 827 ## COG1475 Predicted transcriptional regulators - Prom 34600 - 34659 3.0 + Prom 34550 - 34609 4.0 37 9 Op 1 . + CDS 34642 - 36201 830 ## COG1061 DNA or RNA helicases of superfamily II 38 9 Op 2 . + CDS 36204 - 36482 374 ## HCM2.0079 hypothetical protein + Term 36491 - 36519 1.0 + Prom 36521 - 36580 2.0 39 10 Op 1 . + CDS 36707 - 36964 216 ## YPDSF_4062 lipoprotein 40 10 Op 2 . + CDS 36969 - 37496 172 ## HCM2.0081 putative transcriptional regulator + Term 37505 - 37548 7.2 + Prom 37538 - 37597 4.5 41 11 Op 1 . + CDS 37819 - 38469 521 ## HCM2.0083 hypothetical protein + Term 38481 - 38515 6.0 42 11 Op 2 . + CDS 38520 - 38723 215 ## gi|293411873|ref|ZP_06654598.1| predicted protein + Term 38730 - 38758 3.0 - Term 39328 - 39364 3.0 43 12 Tu 1 . - CDS 39368 - 39850 493 ## HCM2.0085c hypothetical protein - Prom 39884 - 39943 2.2 44 13 Tu 1 . - CDS 40056 - 40337 423 ## YP_pMT042 ABC transporter - Prom 40376 - 40435 3.2 - Term 40422 - 40454 3.0 45 14 Tu 1 . - CDS 40464 - 40859 527 ## HCM2.0087c hypothetical protein - Prom 40879 - 40938 3.1 - Term 40922 - 40954 0.5 46 15 Tu 1 . - CDS 40988 - 41299 308 ## HCM2.0088c hypothetical protein - Prom 41332 - 41391 3.1 - Term 41401 - 41435 2.7 47 16 Op 1 . - CDS 41440 - 41649 280 ## HCM2.0090c hypothetical protein 48 16 Op 2 . - CDS 41663 - 41884 299 ## HCM2.0091c hypothetical protein - Prom 41921 - 41980 2.0 + Prom 41880 - 41939 3.1 49 17 Tu 1 . + CDS 42030 - 42272 184 ## HCM2.0092 hypothetical protein + Term 42372 - 42407 2.1 50 18 Tu 1 . - CDS 43707 - 44522 296 ## HCM2.0093c hypothetical protein 51 19 Op 1 . - CDS 45036 - 45872 372 ## KPK_A0230 hypothetical protein 52 19 Op 2 . - CDS 45956 - 46273 182 ## HCM2.0094c hypothetical protein - Prom 46293 - 46352 5.7 53 20 Tu 1 . - CDS 46358 - 46624 232 ## HCM2.0095c hypothetical protein - Prom 46645 - 46704 2.4 + Prom 46599 - 46658 2.4 54 21 Tu 1 . + CDS 46811 - 47014 230 ## HCM2.0096 hypothetical protein + Term 47044 - 47072 0.6 - Term 47026 - 47063 2.1 55 22 Op 1 . - CDS 47070 - 47768 115 ## COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein - Prom 47790 - 47849 2.7 56 22 Op 2 . - CDS 47866 - 48222 342 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 48246 - 48305 4.0 - Term 48275 - 48312 5.5 57 23 Op 1 . - CDS 48314 - 48685 355 ## HCM2.0101c hypothetical protein 58 23 Op 2 . - CDS 48688 - 48969 226 ## HCM2.0102c hypothetical protein 59 23 Op 3 . - CDS 48966 - 49655 479 ## HCM2.0103c hypothetical protein 60 23 Op 4 . - CDS 49714 - 51399 1128 ## HCM2.0104c putative DNA modification methylase - Prom 51430 - 51489 3.7 - Term 51496 - 51523 1.5 61 24 Tu 1 . - CDS 51541 - 52113 732 ## HCM2.0105c hypothetical protein - Prom 52154 - 52213 2.2 - Term 52169 - 52213 -0.6 62 25 Tu 1 . - CDS 52222 - 53010 471 ## HCM2.0106c hypothetical protein - Prom 53053 - 53112 3.2 - Term 53076 - 53103 -0.9 63 26 Op 1 . - CDS 53173 - 53361 161 ## HCM2.0107c hypothetical protein 64 26 Op 2 . - CDS 53371 - 53865 196 ## gi|309797893|ref|ZP_07692274.1| hypothetical protein HMPREF9348_05135 - Term 53881 - 53915 7.4 65 27 Tu 1 . - CDS 54008 - 54616 310 ## COG0328 Ribonuclease HI - Prom 54678 - 54737 4.1 66 28 Tu 1 . - CDS 55211 - 55441 200 ## HCM2.111c hypothetical protein - Prom 55566 - 55625 14.0 67 29 Tu 1 . - CDS 55644 - 56237 302 ## HCM2.0112c hypothetical protein - Prom 56261 - 56320 3.4 - Term 56294 - 56343 -0.9 68 30 Tu 1 . - CDS 56423 - 57265 417 ## HCM2.0113c hypothetical protein - Prom 57310 - 57369 1.6 69 31 Op 1 . - CDS 57394 - 57951 425 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 70 31 Op 2 . - CDS 57961 - 58380 418 ## HCM2.0115c hypothetical protein 71 31 Op 3 . - CDS 58444 - 59088 477 ## HCM2.0116c hypothetical protein 72 31 Op 4 . - CDS 59088 - 59564 357 ## COG0262 Dihydrofolate reductase 73 31 Op 5 . - CDS 59561 - 59974 260 ## HCM2.0118c hypothetical protein 74 31 Op 6 . - CDS 59976 - 60926 831 ## COG0207 Thymidylate synthase - Prom 61121 - 61180 6.4 - Term 61161 - 61194 2.1 75 32 Op 1 . - CDS 61269 - 62165 837 ## HCM2.0120c hypothetical protein 76 32 Op 2 24/0.000 - CDS 62221 - 63363 1293 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 63401 - 63460 5.2 - Term 63433 - 63469 3.0 77 32 Op 3 . - CDS 63471 - 65786 2468 ## COG0209 Ribonucleotide reductase, alpha subunit - Term 65791 - 65826 5.1 78 33 Op 1 . - CDS 65864 - 66433 389 ## YPMT1.38c hypothetical protein 79 33 Op 2 . - CDS 66445 - 67191 121 ## HCM2.0124c hypothetical protein 80 33 Op 3 . - CDS 67181 - 69097 1339 ## COG0419 ATPase involved in DNA repair 81 34 Tu 1 . + CDS 69124 - 69369 94 ## 82 35 Tu 1 . - CDS 69327 - 70412 890 ## COG0420 DNA repair exonuclease - Prom 70516 - 70575 5.6 83 36 Op 1 . - CDS 70588 - 71082 517 ## HCM2.0129c hypothetical protein 84 36 Op 2 . - CDS 71158 - 71802 445 ## HCM2.0130c hypothetical protein - Prom 72032 - 72091 3.7 85 37 Tu 1 . + CDS 72547 - 73602 452 ## HCM2.0131 putative replication protein A + Term 73623 - 73667 9.2 86 38 Op 1 . - CDS 74171 - 74383 339 ## YPMT1.45c hypothetical protein 87 38 Op 2 . - CDS 74383 - 74718 480 ## YPDSF_4079 hypothetical protein 88 38 Op 3 . - CDS 74715 - 74894 94 ## HCM2.0002c putative periplasmic protein 89 38 Op 4 . - CDS 74935 - 75210 97 ## HCM2.0003c hypothetical protein - Term 75237 - 75268 4.1 90 39 Op 1 . - CDS 75279 - 75689 401 ## HCM2.0004c hypothetical protein 91 39 Op 2 . - CDS 75673 - 76044 174 ## HCM2.0005c hypothetical protein - Prom 76145 - 76204 5.5 - Term 76152 - 76198 4.1 92 40 Op 1 . - CDS 76207 - 77037 962 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 93 40 Op 2 . - CDS 77041 - 77241 173 ## HCM2.0007c hypothetical protein - Prom 77264 - 77323 9.0 - Term 77297 - 77325 3.0 94 41 Op 1 . - CDS 77332 - 78408 1061 ## COG0468 RecA/RadA recombinase 95 41 Op 2 . - CDS 78411 - 78677 312 ## YPDSF_4085 hypothetical protein 96 41 Op 3 . - CDS 78677 - 79621 756 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) - Term 79631 - 79664 4.7 97 42 Op 1 . - CDS 79682 - 80710 776 ## YPDSF_4087 hypothetical protein 98 42 Op 2 . - CDS 80830 - 81261 562 ## HCM2.0012 hypothetical protein - Prom 81286 - 81345 7.6 99 43 Tu 1 . + CDS 81820 - 82383 334 ## YpAngola_0103 hypothetical protein + Term 82389 - 82416 1.5 - Term 82377 - 82404 1.5 100 44 Op 1 . - CDS 82413 - 82838 464 ## YPDSF_4090 hypothetical protein 101 44 Op 2 . - CDS 82853 - 86371 2868 ## COG0587 DNA polymerase III, alpha subunit 102 45 Op 1 3/0.000 - CDS 86552 - 87787 892 ## COG0714 MoxR-like ATPases - Prom 87816 - 87875 5.0 103 45 Op 2 . - CDS 87884 - 90250 1194 ## COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) - Prom 90287 - 90346 2.5 104 46 Tu 1 . - CDS 90360 - 90572 91 ## HCM2.0018c hypothetical protein - Prom 90604 - 90663 3.1 + Prom 90661 - 90720 5.0 105 47 Tu 1 . + CDS 90836 - 91222 364 ## HCM2.0019 hypothetical protein 106 48 Tu 1 . - CDS 91214 - 92104 256 ## COG0582 Integrase 107 49 Tu 1 . - CDS 92901 - 93425 307 ## ECL_A184 hypothetical protein - Prom 93454 - 93513 3.7 - Term 93484 - 93514 2.1 108 50 Op 1 . - CDS 93522 - 93767 215 ## COG0695 Glutaredoxin and related proteins 109 50 Op 2 . - CDS 93767 - 94132 393 ## HCM2.0024c hypothetical protein 110 50 Op 3 . - CDS 94148 - 94351 108 ## HCM2.0025c hypothetical protein 111 50 Op 4 . - CDS 94362 - 95135 524 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 95160 - 95219 6.6 - TRNA 95553 - 95627 89.7 # Asn GTT 0 0 - Term 96144 - 96178 -0.9 112 51 Tu 1 . - CDS 96377 - 96682 268 ## HCM2.0031c hypothetical protein - Prom 96782 - 96841 2.7 - Term 96787 - 96827 3.3 113 52 Tu 1 . - CDS 96882 - 99686 2236 ## COG4644 Transposase and inactivated derivatives, TnpA family - Prom 99784 - 99843 3.6 + Prom 99762 - 99821 3.5 114 53 Op 1 6/0.000 + CDS 99845 - 100135 195 ## COG1669 Predicted nucleotidyltransferases 115 53 Op 2 . + CDS 100132 - 100533 367 ## COG2361 Uncharacterized conserved protein 116 53 Op 3 . + CDS 100523 - 100879 130 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 117 54 Op 1 . + CDS 101134 - 101460 292 ## Bcep1808_7242 hypothetical protein 118 54 Op 2 . + CDS 101457 - 101957 240 ## Bcep1808_7243 hypothetical protein 119 54 Op 3 . + CDS 101954 - 102325 367 ## Bcep1808_7195 hypothetical protein 120 54 Op 4 . + CDS 102319 - 102876 378 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 121 55 Tu 1 . - CDS 102977 - 103189 294 ## YPDSF_4100 hypothetical protein 122 56 Op 1 . - CDS 103349 - 104671 1195 ## YP_pMT090 putative DNA ligase 123 56 Op 2 . - CDS 104706 - 105182 290 ## YPDSF_4102 hypothetical protein - Term 105219 - 105245 -0.7 124 56 Op 3 . - CDS 105264 - 106058 542 ## HCM2.0038c hypothetical protein - Prom 106078 - 106137 2.4 125 57 Op 1 . - CDS 106139 - 107323 731 ## HCM2.0040c hypothetical protein 126 57 Op 2 . - CDS 107413 - 108753 1218 ## HCM2.0041c putative DNA helicase - Term 108767 - 108806 -0.1 127 57 Op 3 . - CDS 108814 - 109539 560 ## HCM2.0042c hypothetical protein - Prom 109577 - 109636 5.5 128 58 Tu 1 . + CDS 110034 - 110600 72 ## VEA_002226 hypothetical protein + Term 110607 - 110643 6.6 - Term 110584 - 110638 11.1 129 59 Op 1 . - CDS 110642 - 111001 396 ## HCM2.0045c hypothetical protein 130 59 Op 2 . - CDS 111001 - 111366 476 ## HCM2.0046c hypothetical protein Predicted protein(s) >gi|333596723|gb|GL892089.1| GENE 1 2 - 266 199 88 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0046c NR:ns ## KEGG: HCM2.0046c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 88 1 88 221 155 95.0 5e-37 MTRIIVVGGTKGGPGKSTVAQQIAVCLKVKKKKKTHVTDIDIQRTTTSWCEDRRQNEDLE LIPFAYVQDDIVKHIKSLKGRYDYVVID >gi|333596723|gb|GL892089.1| GENE 2 633 - 902 221 89 aa, chain + ## HITS:1 COG:ECs4308 KEGG:ns NR:ns ## COG: ECs4308 COG4453 # Protein_GI_number: 15833562 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 110 77.0 9e-25 MSALKKQRIDLRLTDDDKSMIEEAAAMTNQTITQFMVASASERAAEVIEQHRRLILSEES WNIVMDAISNPPAPNDRLKRAAERLQSME >gi|333596723|gb|GL892089.1| GENE 3 1080 - 1430 255 116 aa, chain + ## HITS:1 COG:ECs4307 KEGG:ns NR:ns ## COG: ECs4307 COG0454 # Protein_GI_number: 15833561 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 113 59 171 175 167 67.0 4e-42 MGFYTLSGSCFARNTLPSNTQQRKVPYSDAPSVTLGRLAIDKSIQRQGYGETLVAHAMKV VYRASLAVGIYALFVDAKNENAMRFYKQLGFTPLTGDNANSLFYPTKGIEKLFGGK >gi|333596723|gb|GL892089.1| GENE 4 1457 - 1681 182 74 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0048c NR:ns ## KEGG: HCM2.0048c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 68 40 107 114 145 98.0 4e-34 MKCGGKMLLLFIASCMISGCVIKTQTSGVLFCDAANPIYVSNDDFMTEETEREILFHNTM GERLCNWQDRQALN >gi|333596723|gb|GL892089.1| GENE 5 1614 - 1826 137 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|309797675|ref|ZP_07692062.1| ## NR: gi|309797675|ref|ZP_07692062.1| hypothetical protein HMPREF9348_04912 [Escherichia coli MS 145-7] hypothetical protein HMPREF9348_04912 [Escherichia coli MS 145-7] # 1 70 14 83 83 103 84.0 3e-21 MTLAAVLFVLVGAYTMGGRAARQAIEEKARQEDRKRLQSTVDVKNETLNEVRRKDASAVH RELHDKWLRD >gi|333596723|gb|GL892089.1| GENE 6 1867 - 2559 695 230 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0049c NR:ns ## KEGG: HCM2.0049c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 230 1 230 230 448 99.0 1e-125 MKTPRGIRNNNPGNLDKGSPWQGLIDNPAEPRFCTFKDPVWGIRALAVTLITYHDKRRAK DGSSIDTIREVIERWAPPHENNTVAYVNEVSKAVGVTPDMIIDLHDYDTLRPLVEAIIRH ENGRGPLKTPNTWYAAEVIEEGLRRAGVVKPVKTVKAVPVTKETAGATVTAGIGLAQLAD VMPQVSAAMDKAQGHITSGDTVRIIFGIATIVVAGFIAWSQVRKHQNGMV >gi|333596723|gb|GL892089.1| GENE 7 2573 - 2896 406 107 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0050c NR:ns ## KEGG: HCM2.0050c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 107 1 107 107 196 97.0 3e-49 MSNEMAGVTPEQVERIAAIVAREVVGKLGKELREEIGQEVNDQLKTYFGDMTPSQHSIQH SNLDKLLNRLDAISSGFFGGIISKITSFLITALLLGLAAYGVKNGLQ >gi|333596723|gb|GL892089.1| GENE 8 2971 - 3693 48 240 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|311993250|ref|YP_004010116.1| ## NR: gi|311993250|ref|YP_004010116.1| gp38 distal long tail fiber assembly catalyst [Enterobacteria phage CC31] gp38 distal long tail fiber assembly catalyst [Enterobacteria phage CC31] # 1 240 21 261 261 195 76.0 2e-48 MSAARTAVQLSAAGNMSQLAGRSKEIHYSIGANHNYNKDTLINYLKSQGATPVVVTITGD LVSSSSGVPCLDFPSSLTNSYISLVINAGVTVYGRGGNGGVKGGGAAGGTAINNGIGTRL RITNNGAIAGGGGGGGGNSADGGMGGGGRPFGVANTTRPPASTSRAATSGTLTAPGIGAQ YLIGSTAVQYTCGSGGNVGAAGAAATGRLGTMYGGGAAGKAVTGNAPTWTKVGAIYGARV >gi|333596723|gb|GL892089.1| GENE 9 3826 - 8007 1389 1393 aa, chain - ## HITS:1 COG:DR0075 KEGG:ns NR:ns ## COG: DR0075 COG1511 # Protein_GI_number: 15805116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 153 532 747 1116 1467 75 26.0 7e-13 MWYREGTITFTQGSDALSGTGTYWNVTANGVLPGMIVIGPDNKLYEIKRVISDTSLILAE PYTGETQTDVPCRIITTYEGDLTQFSARFTALMTRMSADSKTMRSWLTAVDEVTLEREDG TEVTVKSLTQIVNEHNANQKWYTDNADVINAAGDKAREAAASAAAAAESANTASTKATEA SQSAAAAAASENAAGASASAAKTSETNAESFKVDAAASAATASTKATEAGESATSAAASK DAAKASETQAATSASEASASASASSDSAAAAKTSETNASASEQAAAGSAADALASKNAAK ESETHAASSAGESAASAAAAKTSETNADASQKAAAASESAAASSANAASESATAAGESAD AALASQNAAASSEEKAKTSETNAKASETAASESATAAEASKAAAQNSEAHAGESAAAAAG SADAASKSATAAADSATTATEKANVASEQATASEASAAAAKTSETNAKSAETAAEGSATA AAKSAGEAAASATTATEAMAVAEAKAKEASDSAALASTKATEATDAAAGAKTSELNAKES ETKAYEYAQNAQASVASVKWKGTSAEMDMATDAPKWVKVSTARMPQSTSTVYIEVIGGAG YEAGQPALAAMADIVLRTAAGDPKSVNAVAYRTMDSAVLSVATVNTADDNYDIYIKAGAG SQKLVVNLQSAGAVVETLEVLEVVDTLPEDAVEGTVYHRVISDQDGSITGSLVGNASTAT VLQTARYIGGVRFDGSTDINLPGVNIQGDQNTTGNAATATKLQTPRTINSVMFDGSANIT IPTLVSRGRVNALASNTQGAMPGIQMYEAYNNSYPTAYGNVIHLKGAYASGEGELLVGWS GTSGAHAPVYVRSRRDAGDANWSGWAQVYTTAHKPTAKDVGAAQAFSASYSTGAGNWTTA EFIAWLKARGAFEVPYWMMKGSWSYADNKIITDTGVGNICLAGAVIEVLGTEGAMTIRVT TPTTTTGGGIACAQFTYINHGSAYAPAWRRDYNTALKPTAADVGALPISGGTMTGVLTLQ NVSQPLKTQGGGILANDGNLYINKSGFAGWIDALFMKNSGGTMSGQLKIRSTDGLRIYDA AYGMIFRRSENNFYLIPTAKDQGENGDIGSLRPFYVDLTNGRVTMGNGAVVNGGLGLGVV NGLGGNSIVLGDNDTGFKQNGDGILDVYANSAHVFRFVNSTLQSLKPLSVTGDITSSAWV YANRFSINSGSGAWIDMRNQNVIFGRNAVSTSSAQALLRQDHADRKFFLGGLGNSQFGFY MINNSRTANGTDANAYLQNDGTWVCGGNGSFNDVYIRSDRRSKRNIRKIERALDKLDRIE GVLYEIQVCDRYEQSGGLIAQDVQNVQPELVTVDHNDQSGEPRLRLNYNGVIGMLVEAVK ELREEVRELKAKM >gi|333596723|gb|GL892089.1| GENE 10 8088 - 8705 509 205 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4033 NR:ns ## KEGG: YPDSF_4033 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 205 1 205 205 369 89.0 1e-101 MEETPVISAVRNAVRNLSGGISCEIQFDGLVMEDGVTPLFLPYTLAETDTSPLAKKILEA LGSEASGGIAPYPDQDEYIERLKVEKLAEINDWRIRQESFTVYFEWNGHRWDANDISKER LDISLKAAAGGLPDNFFWTDADNNDVPVTLEQLKELEMRMTQTLFDRKFSIHEHQRVMKK DILEMSDPELIKNYQVGWEDGSARR >gi|333596723|gb|GL892089.1| GENE 11 8723 - 13354 3628 1543 aa, chain - ## HITS:1 COG:YPMT1.06c KEGG:ns NR:ns ## COG: YPMT1.06c COG4733 # Protein_GI_number: 16082788 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 1 1543 3 1545 1545 2790 97.0 0 MEQFKKKRLPLLIAGAGGKKSSGSSRTPVEADDTVNSRAMASILDLLGEGVIGGLVDGAK SIFVDDLPILNEDGSPNFSGITWDFRDGSQDQTPMSGFDFVETPKSVNIQLKRMHDVTIA IDNDEADRVRVILKFPSLRSIDKKTGDTNGTTVKYKFQIANGDNAFKDAIAEGESTSEIT LTAKKTGVYYRSYELKLPKPGRAYKVRVLRLTDDSNTQYIFNDTWVDSVGEIVDTPMNYP NSALVGLKVNSEQFGSSMPSRSYLVRGLKIRVPSNYDEHTNTYIGVWDGTFKLLSSSNPA WILFDLLTNARYGLGQYVSESMIDLGQIYQIGRYCDEEIDNGFGGKEKRFAINTQITSRQ DAYRLIQDIAGAFRGMVFWAGGMVNVMQDSPSDPVMMFTNANVKDGMFSYKGSARKDRPS VALVTYNNKEDGYKQNIEYVEDQEAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTARM ESDVISFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVAFTKNSITLDAPVTLNKAGSY IRILNQEGEIVERDILETGEDITKVTFSKALNSGDMPVMNGVWTITEPDLEPMRVRVINV AQGEAQGTFDVTVVQNNASKYEAIDNGATLIPENNTVLDPTYSKPTNLQVTEGTYISSPG NLSIKLVATWEGKSAEYWISWRRSDENNVSNWQSARVTEEQFEILNIAENGQYDIQLYAV SFSGKKTDIISTVYQVKGTMTPPGSPTSLTAVGDYRNVILNWVNPDSIDLDHINVYASQT NDLETAKLIAEAASTTFTHAGLGDSETWYYWVRAVNKRGMLSPPNSNLGTEAMTRDVLSF LTGKITSSELGQELLEEIDSKASQDAVDAINKQMEESLKELDQSVADLDSKLEDTSGRLE QAQNDLKNEVSGTLDKVNDALQQVEDSNAALVELQETVSEQGKAVAGAVEAAHAALDNAS ALIAEEREARVEGDKANAKQIEAMKSSVDDSVAAVEEMKKTVAEVERASAEVSTNIEALA KTNIDLALRQDEDQHKQMVNNAKIATTQKTFADDMSAMASKVEEIRAEIGEDIRASILEE TTARVEADKAIATHISKLEAQLNDDISAAIVAEQEARATADEALSRQITTLQAKVEGDIS AALTEEQIARATADEALSKQITQLKAQTGEDIKAAVAEETQARTDADGALASQISSLKAQ TAEDIKAAVDTETKARTDADSALAGQITNLQAQTGKDINAAITSEATARANADGALGKRI DTVKAEVDGNSALIQEQAKAIADTDKKVSAAWTLKMETSTSGGQKYVAGIALGIDSTGLS QFLVQADRFGLVNSVNGKITTPFVIENSVAYMNGAYIKDGTITNAKIGNVIQSNDYAAGS KGWIIPKNGSPEFNNGTFRGSITANSGSLNNVTIAQNCQILGKLHANQIDGDIVKAYMVN GSSIYLAPQTFARVIYVSGGYYYYAPSENTNTYSWSRITEYTVNGVKQQMYGKRDNSENQ SGMFGYYNLPAGQSATVDVYTWHEQRKYNHRVNEPYLVLVFKA >gi|333596723|gb|GL892089.1| GENE 12 13376 - 13927 340 183 aa, chain - ## HITS:1 COG:YPMT1.07c KEGG:ns NR:ns ## COG: YPMT1.07c COG4723 # Protein_GI_number: 16082789 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 1 183 13 195 195 366 99.0 1e-101 MARHFGRHWHLKVRNTKQALDLVEANRPGLKAWMKRNMKTYDSYHIQITNKQGHKWSVDE SEFQMMGQSDNIAKIRITPVPRGSGGKAFGWFQTVVGALVMVASFWFPALAPLGLSLMMG GISQLISPQATNDSVRQADNSNSFYFDGPQNTTNQGNPVQLIYGEEILVGSQVVSSSITI DQL >gi|333596723|gb|GL892089.1| GENE 13 13960 - 14748 428 262 aa, chain - ## HITS:1 COG:YPMT1.08c_1 KEGG:ns NR:ns ## COG: YPMT1.08c_1 COG1310 # Protein_GI_number: 16082790 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Yersinia pestis # 1 143 1 143 143 300 98.0 2e-81 MGNRAFPELGSDVMQEIYLTAIKRYPNEACGFLVRTTGEKYRFMEARNVSENPENTFVMH ADDIIAAEDAGDVVAIWHSHTDESAEASDADRAGCEATEVPWLILAVRKNVEGDAPFHFS EMNVITPDGFEMPYLGRPYVFGVFDCWMLCRDYLKREFNVELNPNPHLHIPSWYTGDTDI LDQNYRNEGLVRLAPGTEPQRGDVFFIQYGKMPDHCAVYIGDGMILHHQIDRLSCRAYYG GMYQKHTTHHLRHRDLLKGDEA >gi|333596723|gb|GL892089.1| GENE 14 14741 - 15439 536 232 aa, chain - ## HITS:1 COG:YPMT1.09c KEGG:ns NR:ns ## COG: YPMT1.09c COG4672 # Protein_GI_number: 16082791 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 232 12 243 243 492 99.0 1e-139 MGIKADIQSLSPSALIELFELDMSNTTSGGKLFFHAGTNELMEPVVWQGVSYEPWPIKAS GFDKTGQGTLPRPKIQVSNFAGTVSAEVQANDDLVGCRIIRKMTLARFLDAANFKDGNPT ADPNQHFPDEMWFIEQKTLETHEVVEFELSSVFDLMGVQLPYRQIIKNTCPWKYRGPECG YTGPYFDKNNQQTTMSGADYCTKRYDSCNARRNYFANGVIHFGGFIGATRYG >gi|333596723|gb|GL892089.1| GENE 15 15529 - 15864 260 111 aa, chain - ## HITS:1 COG:YPMT1.10c KEGG:ns NR:ns ## COG: YPMT1.10c COG4718 # Protein_GI_number: 16082792 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 111 1 111 111 217 100.0 4e-57 MERLTFNWYPDYESEKTVKPNVTVLNFGDDYEQRQAKGLNRIKEEWSLTFTRSYDVINAV DDFLTARAAVESFYWTNPRGKKMVVVCDSHTVKRYQGYLVLTATFRQIYEG >gi|333596723|gb|GL892089.1| GENE 16 15906 - 20477 3833 1523 aa, chain - ## HITS:1 COG:YPMT1.11c_2 KEGG:ns NR:ns ## COG: YPMT1.11c_2 COG3941 # Protein_GI_number: 16082793 # Func_class: R General function prediction only # Function: Mu-like prophage protein # Organism: Yersinia pestis # 247 696 1 450 450 763 99.0 0 MSQNVEFILSLEDKQFTASIDRAGKLLTRFGEQATKPAQKINNLERSLGSVSRIIGVLES KLDATADKLQDVAAGFELVSDVSRKTRGNITSLNSGLKTLIERVDTTTSSVNKLTTSLRK VQSELNEFSDWATFAGKSASRFGTEVKEASSSVSGMNTRLNTTTKRLSNWGVTASQAAEG LKKVRDQMDAVIGRQQLISKPVRVRTSGYGEGGGGRRGGTNGHGWRGAENGVFSGLRGNI FLLGEIGDAARTVTDILFGWQKPIVEAASEMERMRVMLRGLNKDKANPGKAAAEDMQYIV DMAQNAPFAMQALTDSFVKFRSAGLDPTDGSLKALVDSVARFGGDSELLKRAAVAVQQMS GKGVVSMEELRQQLGEAVPNAMKAMADAAGITMGELTKAVSTGTVEAKQALSLMFVGLRA ENENAAKDMMQTYTGALAQLQTSFTLFADRVGQAGYLDSLSKGMKELASIMNSAEGISFA NSLGSGLSTAIDGLRELAQWLAKNQELVISLGKVVAAMVAFKLMRAGIAGVIGTAGQMVN TFTKMSTVLQAPFNLGATAVTRFNRAARMGLAPIPSLIFAIRGAITGLQGAFAGLTAFIA ANPIGAAFTVATVAVAGLITYMTMLRSETSKVVDEIRKIPEAMTAAKRAQMAARAAELEK QIQRDQQALKTGESVNYYSTAAGPVAVKESKEVVEARLKKNQEEYERTTGTMALGDGAVA KRLAKEAAESQIEKIRADNQVFSATFVKARQEALDKIQKINDDKSLSDDEKNKLLAPLRE KVNKSYLEPAQKLVDDLSSRKNATEKQIAHFSDMLEKAKKEGNTEQVQKLQGSIRGYQEH LEAVAQELTQAEFERDSAAKTGKGVMSNQGTVLGLGTTDKAAQKALAQYMRNQMDSATYQ RTLPDGTAMLDFEGKPIIGPKQLKTQLNLQKASSASSLEKMSDEERAAAIAALTKAREQD AAAAEKAGQRTANASQRAARKEENAQRKLAAGYQKALDKADQLMGQMGESSKATVSFDQS LRDTTKSLTELANAVPNEFITQEMIDKAKSRLADLANASDDYREMFNRRNVEQMISTWAP ESDSIISAGYKPSREEKVVDFNDTYNRNLKALMDLRDQASDPKIVALYTKQINQLVAAGN TALIKETGTATQKLALEYENLADQLENSWSNLFSNMTDTLTDFVMKGKMDFSSLAESILR DITNMVVKTQITMPLMNMLGMGTTAAGSSQSGNLLSGVASAVANQGVRMNAVNGDKSVGE ATKETSSSVSGLGQTTQQTTSAIGSATNAIGSWVNGLFTSTEAKDAETKAVKTSIFSMQN LSSVTGALSAAFAMLGANMSGSGNKWLSFGATIASGLVSAWAGGGFDNIGSGSSGSNSGF NNLTGSASDGTGGIPAIPKFAKGGIFGKDGVVPLRAYQKGGIADSPQLALFGEGDMNEAY VPLPDGRSIPVTLNAEGVKGGGGGVFSPVSIEINVNSDGSVSENSNSEGAWSQAAQRMKA IALETIAQEKRPGGSLNPNSQRN >gi|333596723|gb|GL892089.1| GENE 17 20485 - 20709 150 74 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.12c NR:ns ## KEGG: YPMT1.12c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 74 16 89 89 131 100.0 7e-30 MLSRNIDRLRAEEDVRNLQVARAAQADGEGVKAFMEGLQLRIGRPVVTDKVYDPRKDKAD PDAKEQLMQIFGRG >gi|333596723|gb|GL892089.1| GENE 18 20835 - 21152 482 105 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4041 NR:ns ## KEGG: YPDSF_4041 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 105 1 105 105 179 100.0 2e-44 MTKLLDLDSILPPKKSIKFGGQEYPIVEMTVGLFVSIKQMEGKDLQNMSPVEQVTAYADL VRKVIPSVPDAVLEKLTVPQLQQIFTFAMEVIDEENEKAAGEGAK >gi|333596723|gb|GL892089.1| GENE 19 21212 - 21958 963 248 aa, chain - ## HITS:1 COG:YPMT1.14c KEGG:ns NR:ns ## COG: YPMT1.14c COG5492 # Protein_GI_number: 16082796 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 248 1 248 248 403 98.0 1e-112 MSNTHVKNIKLGACKVSFGGVDLGYTKGGVQVEVATETLKVTVDQLGQTTISELVQGRNI TITAPLAESVLQNMVDLMPGSTLSEEDNAVTITSAQGVNLIDVAKELVLTPQDTTDYVLT IPKAATAGNFTMTYQSDDVRVFSVQFTAYPDDDGVLGKMSGPKPVKTVSISPESPEVKAG ETVQLTAQITPADAGDKTGVWESDNQEKATVDQTGLVRGVAEGSANISFTSNSGGKKATK AVTVNSAE >gi|333596723|gb|GL892089.1| GENE 20 22033 - 22338 285 101 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0061c NR:ns ## KEGG: HCM2.0061c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 101 27 127 127 194 100.0 7e-49 MPANVKSGVLLVTPNTGITIDHELKGFYHDSFTVIVRNATITKAVAKANKIMDMFPVEET VSEGVYFRLVRPMSMPITYPKNEGSLIEAGIPIEFAGYLLN >gi|333596723|gb|GL892089.1| GENE 21 22418 - 22891 409 157 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0062c NR:ns ## KEGG: HCM2.0062c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 157 1 157 157 280 99.0 1e-74 MGLKYDAHQFKRAGDRLNNSQKAFKRYLIRDMEKLARLVERLARAMAPLETGSLESAIFA RVVKEGYTGLRIELSVSGAKPREGHQGVEVGDYAEYMELGKYRLGYLSRMKSVTNPPVAG VKPRVGPLFLERAVQISEKQFTQTIAEAARKAGFTRG >gi|333596723|gb|GL892089.1| GENE 22 22882 - 23226 183 114 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.17c NR:ns ## KEGG: YPMT1.17c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 114 39 152 152 220 100.0 1e-56 MNISWQAEIAIYRLGSKNVYGEAQLQFVRKTNVGVVKFEQSNEKSSVRADSSGSRGKANL ELFDAVLVIPLEAAVQLDDVLILEGQKLKVSSVHRRWGLRGRPGHLEVGANIWV >gi|333596723|gb|GL892089.1| GENE 23 23324 - 24157 790 277 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0064c NR:ns ## KEGG: HCM2.0064c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 277 1 277 277 546 100.0 1e-154 MAQIDTYRSGEAVSLSFAFNVLDIESATYTVRDGAGAIIVDNEPLDITEGQMSIPVVVSA EHNLLSDKERDLRHVIVKAVASGLTHEERKMYVLLNSFELSIPGQSFATVADAQMQAIDM LNGDTLLADGEGLMRKRLIEATRRVKTLPFSIRKVLRIDFDRYDRPQNMLNVYDIPWGAD GAYRHDLIDWEQMTPEKFDEFPDYFKQALMLAVVNEACEIANGNDVAAAREDGILSESIG ETTNMYRTGKAANVHVARSTWRLLVSYINNRMIVRRA >gi|333596723|gb|GL892089.1| GENE 24 24157 - 24591 460 144 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0065c NR:ns ## KEGG: HCM2.0065c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 144 1 144 144 266 99.0 3e-70 MKPAKIRLLEPQFLGYTGILCGIQFVDGISVAELPFIDQQRICASMRATTVEGKNVSPSA AYSSRNDLTADDIVETAAPDIVPIKRGTAEVEAKPVQRFTREELESIADCEGIAGLRQIG NQIGVKAKGIVEMIEGILKAQGGE >gi|333596723|gb|GL892089.1| GENE 25 24635 - 25558 639 307 aa, chain - ## HITS:1 COG:YPMT1.20c KEGG:ns NR:ns ## COG: YPMT1.20c COG5492 # Protein_GI_number: 16082802 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 215 1 215 220 291 96.0 1e-78 MPEQKMKITEEAFADFTGHMCRAGFTNSISNEPLSERQQNHLAACFRAIPFTQSVTITPA APSVLVGKTVQLSAGITMSKSADSFTWTSANDQVATVSGTGLVTGVTPGKVKITATDKQT QLSASVEVTVKPVSVESVTVTPDSTSVEKGKSVKLRVDVQPSNATNKRVTWTSKNNDKAT VDQNGNVAGVAVGTATIEVVSQDGSHKATATVEVTEPVVAVTGVSVDPSTTSVEANKTVQ LTANIEPAGATNKRVTWASKNAEFATVDSATGLVTGVAAGTATIEVTTEDGSHKATATVE VTAAPAA >gi|333596723|gb|GL892089.1| GENE 26 25633 - 26508 1134 291 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0067c NR:ns ## KEGG: HCM2.0067c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 291 1 291 291 575 99.0 1e-163 MPLLRDEAEKLSNNELEQGVIETIIDRDDLFAVLPFMKINSKAYLYNREATLSEATFIDV NDTITEGAATFTEHVAKLRILAGDVDVDKFLATTMSDTNNQLAIQVRQKVKGLARAFRRN LILGDSSTNNKAFDGIPKLMHDDQKIDIEGASMTFSMFDELVDAVKDLGADCIMMRSEHL RAYRALLRTVSLGPSEIMMENFGRPMLCHNGVPFIVNDFIPTDSGKASIYCLHLSEENGV TGLYGGENAGIVVENIGTVQNKDATRTRVKWYCSLANKHDKAIAALTNVKI >gi|333596723|gb|GL892089.1| GENE 27 26535 - 27431 804 298 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0068c NR:ns ## KEGG: HCM2.0068c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 298 1 298 298 437 98.0 1e-121 MNLWQMLMARRGLMDVAEAHERGGAGGGAPAGDNEQGNQDPGKQGEQKEQPKGDDDEYAG MTQEELLAELRKSKKAGADLLKENMKRKEKERTLADQLAQYGDIDPARARQLLEAEQAAE TARREAEQAELERRGEFDAVKKQMIEAHQAELAQRDERYSTLESENAALKAQLVEMTVGA SFSGSAFLRDKVLMTPAKARVIYGSHFEVGEDGSVVGFDKPAGQKERAVLVDGEGKPLPF ESAIERILRADPEADALLRSEAKQGAGSNSKPTHKVNQPKSKSTMDKLTSGLGKIGLK >gi|333596723|gb|GL892089.1| GENE 28 27447 - 29027 1360 526 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0069c NR:ns ## KEGG: HCM2.0069c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 516 1 516 524 1005 99.0 0 MELTDKQIKDLVARRHPEYEKKKEHWDFLASTYAGGRAWFNDNIFRYFKEGDQEFKERLE RAYRFNHTREVVNLINKYLFKEVIHRNTDEAPEQIRNFWKRATRQNTSIDAFMAAIDLQS SIYGRIWVVVDSTMNVDVESVADEKKNDARAYAYWISPQQLLDVAWDEDGNMLWALIVEI ARDDEDPFTSTGQEYQRYRLWTQNEWYLFREEVKKGSGNSGRRQAKVVLEDSGQHNLGVV PVFPVDCIGESESPYFSPSLIDDIAYLDRAVANYLSNLDAIIQDQTFSQLAIPVQSLLPG DENHTKVLEMGTKRVFTFDSESGNQPFYLSPDPKQAQMIITTIKTVINEIYHSVGVAGER TKQDNAQGIDNSSGAAKMYDFQRVNSLLVTKAERLERAERQMMQLAAKWMGVELDEDHSL IAYPESFDIRGLTDEFAVAEKLSLLQAPDSVRRHQMEMLIEKVFPNISEAMQKEFQKDLL KFPPKNDLNTLENKSVLTYDQDAAQESGQDQPRGMGTHLLKRPSDK >gi|333596723|gb|GL892089.1| GENE 29 29061 - 30317 1020 418 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4052 NR:ns ## KEGG: YPDSF_4052 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 418 1 418 418 855 100.0 0 MAIPSSLSLVQLHSGQMQVFQSPHRFKVVCAGRRWGKSRLSISTIIRAAAKEKKQRVWYV APTYQMARQILWDDLQEVLPRKWVRKKNDTTMTIVLKNGSEIALKGADKPDTLRGVALHF VVLDEFQDMKPDTWYKVLRPTLSSTRGGALIIGTPKGFSEFHKLWTIGQNKDLQRKGQWK SWQFVTADSPFVPSAEIEAAKNDMDPKSFAQEYLASFENMSGRVYYPFDRNVHVKPLQFN PKLPIWVGQDFNIDPMSSVILQPQPNGELWAVDEVVLFSSNTAEVCDELERRFWRWKSQV TIFPDPAGAYRQHARGESDVDIFKEKGFLRVDYPKKHPPIADRVNAVNRMLMSASGETRL YIDPKCKHLIDSLEKVIYKPGSRDMDKTGGIEHSADALGYPVHRRYPVKNRVILGGSR >gi|333596723|gb|GL892089.1| GENE 30 30320 - 30961 566 213 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4053 NR:ns ## KEGG: YPDSF_4053 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 213 1 213 213 284 99.0 2e-75 MTVEKDESKTRLTPAEWAEAEAKWTSGEYTLSKLEEEYGIRRETLSRHFKKRGLEKGADS VGKMVRESLKSDAELRAKARAEKIEERRTRYDDWAFALGRMVMHEVATAKKDGKPLATIE DDLKSLQRASGTLAKCFEISSKALGMDRAENEEDEIPNLVFGELTPSQVAQLRKEDDEPD LIDDDLLESLEEEALSEAEGDSDASGDESDGSV >gi|333596723|gb|GL892089.1| GENE 31 31157 - 31423 392 88 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4054 NR:ns ## KEGG: YPDSF_4054 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 88 1 88 88 129 98.0 5e-29 MTLTDKQKDIIKTINLGHERGYLLDLDELLEVLPYKTTKQSMQFSIRALVKKGLVEKGMC RQRGDSGYHRRTLGLTTLGRARAKLLVM >gi|333596723|gb|GL892089.1| GENE 32 31433 - 32323 876 296 aa, chain - ## HITS:1 COG:YPMT1.26c KEGG:ns NR:ns ## COG: YPMT1.26c COG2401 # Protein_GI_number: 16082809 # Func_class: R General function prediction only # Function: ABC-type ATPase fused to a predicted acetyltransferase domain # Organism: Yersinia pestis # 1 296 4 299 299 587 100.0 1e-167 MTDIIIKRYRPEEFPRHLDFLERMTVTKGTVEDWHALKSLHYKTDGKPFAPTYYRCELDD RLVGVVVMAYPKLLLAPRHRMFPKLKPTTNTTVANQYWGRYVNNNFAVISRSVVDTQYRG VGVSYRMINLVSRMHDRPIIEIQSSMSKYNPFAMKAGFQFIRPERPKSYESALRVFQRHF RSDPGDNEAIVKELFAMSESRRRRALRDLVADYHKNSSLAKAGRNRGTTIQDIADSLVDE ASIVKLLKDIHNLSFTSPLYGVYRNPDFGRQLPDTLPLLAFDKQPLNKPLEIALPA >gi|333596723|gb|GL892089.1| GENE 33 32329 - 32583 213 84 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0074c NR:ns ## KEGG: HCM2.0074c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 84 1 84 84 159 100.0 4e-38 MPDLKIVELKPSKEADNNNVEVIRLLEEALQYAREGKSQSLALLMINNDGSVLDCWHNGG RPYVMVGAMESLRLDFINANIERR >gi|333596723|gb|GL892089.1| GENE 34 32576 - 33214 812 212 aa, chain - ## HITS:1 COG:YPMT1.27c KEGG:ns NR:ns ## COG: YPMT1.27c COG2401 # Protein_GI_number: 16082811 # Func_class: R General function prediction only # Function: ABC-type ATPase fused to a predicted acetyltransferase domain # Organism: Yersinia pestis # 1 212 21 232 232 394 98.0 1e-110 MSKYTINVSFQTRVNKTTRTLEIAESFGLGLDEKEWTLYDNLELEVKQGDVVYITGQSGS GKSVVLRELQRQMKDEGLSVASIDDFTFDNEVNVIDQLGKTTSEALGLLSMAGLNDAYLF VRKPSEMSDGQKYRLKIAKLIESGAKVWAADEFGAVLDRVTAQVVASNLQRAARKVGATV MVATTHEDLKNALRPDMQITKHYKERVKVEYA >gi|333596723|gb|GL892089.1| GENE 35 33211 - 33879 761 222 aa, chain - ## HITS:1 COG:YPMT1.28c KEGG:ns NR:ns ## COG: YPMT1.28c COG1475 # Protein_GI_number: 16082812 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 222 1 222 222 369 98.0 1e-102 MTKNFEIVYRNPAELIPYEMNAKKHDEQQIRDLAAAIKKRGFDQPITVDKHDVIITGHGR REAALLAGLERVPVIVRDDLSEEEVKAKRLEDNRLASIDYDAIKLQQELESLVLGEVEVF GFEERELNVLVGSMTEEMETGSLVLDLGEETERQKEEHTEISREVAAEEVRVIDVLGFKT LPAGSAIVVGDLLAHMEEITGESGVDAFVAYAEKVSSGELAA >gi|333596723|gb|GL892089.1| GENE 36 33879 - 34577 827 232 aa, chain - ## HITS:1 COG:YPMT1.29c KEGG:ns NR:ns ## COG: YPMT1.29c COG1475 # Protein_GI_number: 16082813 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 232 1 232 232 431 98.0 1e-121 MDCIRIMDVKITILQVEVANLRPNPWNTNSVGAQNFEKLKGSIEKLGFFKPILARELDGG VFEILGGEHRWRAAMEQGISTVPVISVGKINDLVAKQMSLVDNERYGEDDQVALQRLIEE IQSEIDYRLSDIAPYDDEMAATLAKASVIDLEALEALSRGDDEPVDEDKRDKTERVGAEH QTMRFKVTFDASDRVADTIKTIIKEQGINTGNEMENAGEALVWLVDYYKERM >gi|333596723|gb|GL892089.1| GENE 37 34642 - 36201 830 519 aa, chain + ## HITS:1 COG:YPMT1.30 KEGG:ns NR:ns ## COG: YPMT1.30 COG1061 # Protein_GI_number: 16082814 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Yersinia pestis # 1 519 1 519 519 1048 99.0 0 MTVRIVSNAVNALISGADDNVKRLVQEMLSYEVEAGDWKGTSTMFNWSKNAFPAGFAKPV AANLLKAGIKCVHVRKEKAPALGKPNPVVNPFPYNPDYAYQDQTVETLVREGMMIAQIAT GGGKSNVACKAAARIGRMTLFLTTRSVLMFQMAENFQKSIDYRAENGEPWLKGQKVGVIG SGEFQVSRHINVATVQTLASFLEEPPRDASPEKKQYHLKRRELVKRFLSSVSLLILEEAH ESSGSNFYDIARLCINADYRLALTATPFMKDSTEANMRLMAVAGRIEIKVTEKYLIDRGI LAKPYFLYHKIAYTPDEVRIRAELASKHLNFRVGMSTAYQKAYQLGIVYNLGRNEAIVRE ALMYKSHGLNCMTLVRLKRHGQILMEMMKESGLKVDFIYGESNQTTRQAKLNSLAAGKID VLIGSTILDVGVDVPSVGAVILGGGGKAEVEMRQRVGRGLRAKKNQANVCFITDFIDVSN KYLMSHSYERKHIIDTTPGFAEGVLPVGSTFDFTVLNRE >gi|333596723|gb|GL892089.1| GENE 38 36204 - 36482 374 92 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0079 NR:ns ## KEGG: HCM2.0079 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 92 1 92 92 134 100.0 2e-30 MSEKRAIHCQVQLTEKANDKLETFQNRLRERNIKLSKADIINLVLSNMTMADFDKAATSL EASAKAREKVMKIYESSGMTKEDLADILKRLD >gi|333596723|gb|GL892089.1| GENE 39 36707 - 36964 216 85 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_4062 NR:ns ## KEGG: YPDSF_4062 # Name: not_defined # Def: lipoprotein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 85 56 140 140 169 100.0 5e-41 MIGAGCDASIFINGETVAKLETGEKATFHLDAGQWIVGASLEGAGLCALNPARQERETIT KAGETKVFRVFTSNAGDIDILPTTL >gi|333596723|gb|GL892089.1| GENE 40 36969 - 37496 172 175 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0081 NR:ns ## KEGG: HCM2.0081 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.typhi # Pathway: not_defined # 1 175 1 175 175 359 97.0 3e-98 MTNITDITYGIPAEVWPRDYTNVEKALMFWRKSLIPVRVTMEDGQVFCMYVQGLMSSRNK VDLCPAPFDKENRIRLPLERISTIESGVTEGIAHDFTGRTTVHPDYVDNRPSRRDFFKIC RQAHEMQKSIRVYMADGREIEGVSSGVDACQVTLNMGDGRKTVVMFDWVERILPF >gi|333596723|gb|GL892089.1| GENE 41 37819 - 38469 521 216 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0083 NR:ns ## KEGG: HCM2.0083 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 216 1 216 216 366 99.0 1e-100 MSNVAISKKSIIDAAVVIANELQVAANNATQTYNNHYQNGTHTKADKANMLAATTKLAYF TNNVLNAVNDEKLAGVFYYAIKASKQAPEVFFREAMTNSYSLEKLVYLVKSIKSGKCVYS VADMSGSRVFALIEMINDELETFTNGAVFDLMNEAKKACEIKLDAGYTQANQLINLCERL GLVEKIKGMGAAKNGSQQYRFIKNDFYNYLADAFKA >gi|333596723|gb|GL892089.1| GENE 42 38520 - 38723 215 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293411873|ref|ZP_06654598.1| ## NR: gi|293411873|ref|ZP_06654598.1| predicted protein [Escherichia coli B354] predicted protein [Escherichia coli B354] # 1 67 16 82 82 98 89.0 2e-19 MISYDQIRAEYRAKYRAYKLELIGDLKAQRDKLNFTFSDLLNSKRDCKRKREYLRLSEMI GKLQNSI >gi|333596723|gb|GL892089.1| GENE 43 39368 - 39850 493 160 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0085c NR:ns ## KEGG: HCM2.0085c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 160 1 160 160 319 99.0 3e-86 MNFIATVNTPAHGHISVTFSDNEKSVLGAWRDNVTIELSGKEKQQITNDIICNRRHKRVF EKAYVSTSGFGVFIFPVRSGRFCQSKLIEFATQIALWVKTESGFDFSEQEAVGEGMRIAN NAIKCKNVTYEAGIDSWSVSCGEYVKEVYGKNRIHILTGK >gi|333596723|gb|GL892089.1| GENE 44 40056 - 40337 423 93 aa, chain - ## HITS:1 COG:no KEGG:YP_pMT042 NR:ns ## KEGG: YP_pMT042 # Name: not_defined # Def: ABC transporter # Organism: Y.pestis_Mediaevails # Pathway: not_defined # 1 93 24 116 116 171 92.0 1e-41 MTDFTISPKAENVWLESWLDLSPEEQQEMDHVEQDEQCDARFFRFEDSVYDIADFMRDDR FPDWHAGYPLNAFAMLMIRVDGSGDTIDVGLLH >gi|333596723|gb|GL892089.1| GENE 45 40464 - 40859 527 131 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0087c NR:ns ## KEGG: HCM2.0087c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 131 1 130 130 160 64.0 1e-38 MTVIRENLVLDLYYASETTSGGKVAKLTAILRDSTNGTEVLTTTLIRTGTEEDWVYTVGF QSISDASEPMLLKLETYFRGVDKEMFEKMMVKADELYTSYLNPSNTWLGQYGLRIVSNEP VENYIPESVFA >gi|333596723|gb|GL892089.1| GENE 46 40988 - 41299 308 103 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0088c NR:ns ## KEGG: HCM2.0088c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 103 1 103 103 172 95.0 5e-42 MKNAMITKLSAGQPRKEKPTVMSQLTLLDIIANGTAIRLFKETLVSFDNGSRTRYVMSVR RQSGRGWMAKQIIWPEGELEQALLEANKVAQQEIQRASLLATA >gi|333596723|gb|GL892089.1| GENE 47 41440 - 41649 280 69 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0090c NR:ns ## KEGG: HCM2.0090c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 69 4 72 72 122 100.0 4e-27 MPVMVEVWSVDSLAECLDAVGPELYRKLWSFVPAEGESPKGKDIWHLLSEDEQRELVDAV HIEFPDDED >gi|333596723|gb|GL892089.1| GENE 48 41663 - 41884 299 73 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0091c NR:ns ## KEGG: HCM2.0091c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 71 1 71 71 117 94.0 1e-25 MYKHLNISITLCGEEESPECEISLDDVIRSQDVAGRVATLISEGYRKGTFDFHIEDNPMS VAWNCTTSETKLG >gi|333596723|gb|GL892089.1| GENE 49 42030 - 42272 184 80 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0092 NR:ns ## KEGG: HCM2.0092 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 80 2 81 81 143 96.0 2e-33 MSTKDYTDGYFSIDAERGELLHGGIAVGRVVLVNGQIYTELDDTSSSAPVVSGPFGTREE ALDDLWDNRDDANQGSEIFE >gi|333596723|gb|GL892089.1| GENE 50 43707 - 44522 296 271 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0093c NR:ns ## KEGG: HCM2.0093c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 271 126 396 396 507 95.0 1e-142 MWQMREWFFNKRKDSTFEIWLEKGHLDWLDYISGLRESYLAWTNPDIMPFSPIQATVPGF SWSRAIDKEVLRVHIKTLQQLRKISVSHRDISAILEHIDNNRGRTILDPSLLEDEINKTY KLTGFVMSNYIEFKAKTVSDRAYGEAKFLAFAALLLFVSDWDLNIAIGKFSKIARVKEVD DMLAGNFIGLNPYIRYDVAKAVKKLQDNWPIEYQELEHWDVEKSMREAYEKWCSTEPEFA PPLLPDLYVTQHEKEVARDEEIRQWIKNGDV >gi|333596723|gb|GL892089.1| GENE 51 45036 - 45872 372 278 aa, chain - ## HITS:1 COG:no KEGG:KPK_A0230 NR:ns ## KEGG: KPK_A0230 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 278 1 277 277 329 56.0 9e-89 MELFQYLQSLYPQLTPNNSKIHLASTNEYKENPIQEFVKETFDDWQCLQKLKSFNRTYVV SLIQTEDKARFLYAGTYLNVGCSLTASHAVPGRNEDYYLYQLTPVPELDEYRGRLYVSAE RPRRSILNGETLAGKLRVVEIAPSCLSFGEFPGYKDVVLDRASLGTIIRQELKSWRTALS IVKGIYLLTDVDGEKLYVGQANGKGGIWGRWKTYFKTGHGGNAGLIEAFGTGDEERLKNV TFSILEIMDINSDACEINRRESHWKRILLSRSVGHNRN >gi|333596723|gb|GL892089.1| GENE 52 45956 - 46273 182 105 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0094c NR:ns ## KEGG: HCM2.0094c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 105 1 105 105 195 90.0 5e-49 MLKLTEVYKTAVISTAHVTAADSERLPIACFDPLTDRGLNWVHGTQYGWIVRAGMRGNDW KEELREYGISEETISNIQTIVDAGFDAVHFDCDAELVDGLPGWDW >gi|333596723|gb|GL892089.1| GENE 53 46358 - 46624 232 88 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0095c NR:ns ## KEGG: HCM2.0095c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 88 6 93 93 164 96.0 1e-39 MGSKNSKYVIVYRGEALEHLIPGQFVFFQRKKEYGDGFWLGKTHEDGFEFVLEQPTSLSY GLAYLISLSSVEARHMEFVDDIDDFKLT >gi|333596723|gb|GL892089.1| GENE 54 46811 - 47014 230 67 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0096 NR:ns ## KEGG: HCM2.0096 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 67 1 67 67 128 98.0 8e-29 MKTYDRNRNAITTGSRVMVATNGATGVIKEICGEGKSEEQLRRSDCVSIEGVEGLFCPMD LVRLGFH >gi|333596723|gb|GL892089.1| GENE 55 47070 - 47768 115 232 aa, chain - ## HITS:1 COG:YPO2684 KEGG:ns NR:ns ## COG: YPO2684 COG4461 # Protein_GI_number: 16122889 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative lipoprotein # Organism: Yersinia pestis # 4 112 9 117 122 65 38.0 7e-11 MKNILLASLLVASPAAFAASFDCQKASTEVEHKICDNERLSKLDEQLSSTYSIALKANPG DADTLKTVQRQWINMRGKLTDDKALELVYLIQINGLKGLDGSASTAVVNETPKPVQKQPE VQEKTSKADAKQAKSGDELTLESFRAKYIEVDGEYYSTTSLPGGSSFLFTCASRIADDQV NVWKKYAAKEGKIDLFFELETRIHTAMLNANFQKLNSDLTKTGICDLITAVP >gi|333596723|gb|GL892089.1| GENE 56 47866 - 48222 342 118 aa, chain - ## HITS:1 COG:HP0775 KEGG:ns NR:ns ## COG: HP0775 COG0317 # Protein_GI_number: 15645394 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Helicobacter pylori 26695 # 4 87 42 122 775 72 51.0 2e-13 MSSISKAHMFAAGAHGGVGQKRKYTGEDYINHPVAVRETVAWHGGTVEMQIAALLHDVVE DTHVTIEMVREHFGEHVAEMVLALTNIARPEDGNRIQRFIINVRELEQTPNTNTLSVS >gi|333596723|gb|GL892089.1| GENE 57 48314 - 48685 355 123 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0101c NR:ns ## KEGG: HCM2.0101c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 123 1 123 123 234 97.0 9e-61 MKLGNAVSLFFTALLEGFNYRFCPVWDKALDTLIEEGTLLEVRNGIALFERDAQLYEVFV GAGFNHFGHLISLNTKAIDESVMRRPSFRVMDKLQRHVDAELLRVAKEKERELQTMIGSH IAE >gi|333596723|gb|GL892089.1| GENE 58 48688 - 48969 226 93 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0102c NR:ns ## KEGG: HCM2.0102c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 57 1 57 57 111 98.0 1e-23 MNDLLVERVSAFVKSPLDNPLTRGEQMELARWFLHIHEQMEVFKQLPDLPITDGHVQQVI NSHEKGWAMIVPCKITYELAKEVQANRARSKEE >gi|333596723|gb|GL892089.1| GENE 59 48966 - 49655 479 229 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0103c NR:ns ## KEGG: HCM2.0103c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 229 1 229 229 429 98.0 1e-119 MSGKSRITFASVNQAKLPFNLVLQGNAGTPAGTIKIDKELVTFEGNFDESAQVFIEHLAR RWSQQWRDLEKRANEFDRFMGAMDTAKEALAAGTPLDLESLFKGEMASAMFATMFAGEFV RSGARNYLELGYNVPEMGEFTVTIQRKEGKTPGERIAELEAVVDQRNGECVRLINERDAL REEQLNKGSNTRAAADIYFQLVEECQIPPGGSLVEYVRELQEKAERCAA >gi|333596723|gb|GL892089.1| GENE 60 49714 - 51399 1128 561 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0104c NR:ns ## KEGG: HCM2.0104c # Name: not_defined # Def: putative DNA modification methylase # Organism: S.typhi # Pathway: not_defined # 1 561 7 567 567 1179 99.0 0 MNTALSIIDAITPNTDIDYRQEMNVIHEIVAECEKEIAFMHQVHDFVYGDERHNMINRLL RLNHRPDDERTRFNRAWLDKVDLEWVKQNIWAEYWKKVTDMTNVLLIMPASRRDEWREQF IEGKQETIRTDRTGYQMKVKEFVGVPEFKAETVIPTMLNLLNDRHKYLSERVYGLFKALS PAHKTNKTNGFSERLIIANCISEFWRDSVSVNYRKEDYIDDLRVMLHFFAHKEFITINRT TEMLSAAYRANDCQTGDWMNVDGNLMRVKMFKNGNVHFEIHPDVAWKLNEVLAYSMPAAI PAPCRTAPKTRAPKEFGLIQKTISEPVRTALRDGRFSKDKGVWYFSDSNLQKSQVEELER TLNFIGGVQEKKHWQFPYEIGHTLNTIVATGLIPDTKSHQFYPTPRLIAEYVARAIELKP GEKLLEPEAGRGDLLACIDANPEDVTCIEVAPLFADILLGKGYTNTVCCDFMKWSEDNAG YQFDKIVMNPPYSLGRHREHTLAALEHLKVGGRLVAVLPGDAPVLNWMTLDNYVYAKGKS FTDEFEDTGITVSVYVFKRAK >gi|333596723|gb|GL892089.1| GENE 61 51541 - 52113 732 190 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0105c NR:ns ## KEGG: HCM2.0105c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 190 1 190 190 332 97.0 7e-90 MCEKCKKTNAKVESVIKKVGAAELVEIMGLVVGHEDDASPIDRLFSVLKFSSMIDDPIEI VMLARHFGEAYLEEKERADKLQATLEMVSKPKCSPDSVKADETNASKDREIAGLKSSLAM LLAAFKLMSSQAGFKMPELNSDDPIAVRHLLGAMADQLDDTKSRLEDMMRELTHRHDLNK QPHKTQHVHH >gi|333596723|gb|GL892089.1| GENE 62 52222 - 53010 471 262 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0106c NR:ns ## KEGG: HCM2.0106c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 262 19 280 280 514 100.0 1e-144 MSSKEISKLTGKRHSDILRDIRSVLNELYADDYHNAKLRYEKNQLLTIVEGIVVNIDYRG MEGEYMLDRKHTDVLITGYSLKYRAAVIERWHELEMSVSSGALYGAYPSIPETFSEALRL AADLEEQRADLERKLSVARPKAILMDTICGTADELYGLNEAGRILGTSGAVLGALMDSLG DVYVKRKYTTVNRQFLKIFIDRGYGKNVVIGNGRNQAKFTFKGLCFAAVKLIAAGKITAS AIEYEPCREHVEREMKESKRLH >gi|333596723|gb|GL892089.1| GENE 63 53173 - 53361 161 62 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0107c NR:ns ## KEGG: HCM2.0107c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 62 1 62 62 91 100.0 1e-17 MKWSFQKVTAMIVGLAIFLLGGWIMNLVKLVNGGDLQFDAGMTLARVVGIFVVPVGSILG FF >gi|333596723|gb|GL892089.1| GENE 64 53371 - 53865 196 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|309797893|ref|ZP_07692274.1| ## NR: gi|309797893|ref|ZP_07692274.1| hypothetical protein HMPREF9348_05135 [Escherichia coli MS 145-7] hypothetical protein HMPREF9348_05135 [Escherichia coli MS 145-7] # 1 164 1 164 164 121 50.0 2e-26 MARQTPFTSFNKRPRSIRLVLTELFSGRVSARLAELEERVFELEKRIDAQATAIANLGAT VGMEKVRDSVASRVLRESQTHKDSSHGKFSTKSTEANGLRSNFSNPGSGSRTSRSESVDT GHNYFHHNLADDTPARTTSCLSGWDAVGHDSNSTCNSGSSFCCD >gi|333596723|gb|GL892089.1| GENE 65 54008 - 54616 310 202 aa, chain - ## HITS:1 COG:STM0263 KEGG:ns NR:ns ## COG: STM0263 COG0328 # Protein_GI_number: 16763646 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Salmonella typhimurium LT2 # 42 199 2 154 155 193 58.0 1e-49 MTTKTPARQHTGCRTKSKARYQTHQQSRTNFKTPVVEFNPQLKTVKVFSDGSCLKNPGGP GGYGIVLQYRGEERELSEGFHSTTNNRMEMMGALIALERLKYPCNVILHSDSQYLKNGMT LWMKGWKRNGWITSEKKPVKNVDLWKRLDAAASRHNVRWKWVKGHAGHRENEMCDRLAKI AAYSAADMPHKRDIGFLSQNDR >gi|333596723|gb|GL892089.1| GENE 66 55211 - 55441 200 76 aa, chain - ## HITS:1 COG:no KEGG:HCM2.111c NR:ns ## KEGG: HCM2.111c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 76 1 76 76 143 100.0 3e-33 MVYPTNVVALVESDFLAKVRDMMKDRDKAFSLYEWSLKCLHSGEHKELVEQLLGELINEV FALNVQLHGRENNQSK >gi|333596723|gb|GL892089.1| GENE 67 55644 - 56237 302 197 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0112c NR:ns ## KEGG: HCM2.0112c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 197 1 197 197 403 99.0 1e-111 MIAAEKIKKRERDASLRDLWRTPQWLFVAIQRYIGVKFDVDVACNKDNALLPNFIGVERD ALKCSWGEPGTVAFLNPPYSKITPWIDAAIREQARGVTTVMLIPQSLDTQWYERAAECAN ETVILSGGRVAFVEPDVELGLVEVNINPGGSMLLIFRGYCQEAGHTISKIPLAVMKKLGG YDPANVVRKKRPRKKAA >gi|333596723|gb|GL892089.1| GENE 68 56423 - 57265 417 280 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0113c NR:ns ## KEGG: HCM2.0113c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 280 29 308 308 463 98.0 1e-129 MSAVTNTVKNDDLDELTAMLQSLDEPVQKAAKMSGVDEIDDLLSGLDDAIAKPVEAVADE VMNASSTGDLSSVLEELEIEHESVKVEEPERDLVAEIVNEPAPELDARSTETTGTDPTPL PSVASEPKPEEEQPKRQKAKSERTPAKPRFTLEGKDESFYATAGLESESFTAAFEGAPVK AKDKILNLLNWFSGGPEISVYTVIAMRHILDANTATSNSIKLALMSNPEKPYPLNTASTQ AGQMMAVFPATGIATREGGNLSLNKESPIVKKFIAEYSIG >gi|333596723|gb|GL892089.1| GENE 69 57394 - 57951 425 185 aa, chain - ## HITS:1 COG:RSc1872 KEGG:ns NR:ns ## COG: RSc1872 COG0847 # Protein_GI_number: 17546591 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Ralstonia solanacearum # 8 169 6 166 242 70 34.0 1e-12 MTTIVGGVDIESTGLDFTSGHKIIEIAITRYELETQKHIDSLEMRFNPRRSIDPKAQAVH GISLEDLATEPLLADHAGKIAAYMGACSALVAHNGEAFDLPFIRHEFGSYGVKLPDIPLV DSMLDGLWATEDGKRPRLEELAFSLGFTYDREKAHSALYDTDLMMQCFFKAREKYGFFKL PFESA >gi|333596723|gb|GL892089.1| GENE 70 57961 - 58380 418 139 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0115c NR:ns ## KEGG: HCM2.0115c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 139 1 139 139 256 99.0 3e-67 MIDELPLSDELDRKAIEALIRIADEQSRSLMSEREARLAIRAVFESVQGLVGEEVGEAIN VAMSQFNGGTKRPLFPMHLKLSGGTVLYVSVCLETNQIQILNTSTGEWREPVVCESGEDA LKKAAQFVRGALLKGAKKL >gi|333596723|gb|GL892089.1| GENE 71 58444 - 59088 477 214 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0116c NR:ns ## KEGG: HCM2.0116c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 214 1 214 214 419 100.0 1e-116 MDYRIGITGAQGSGKTTLARYIDAHYGIPYVDAGVGKLMSSLGVKVGERLPLYERLQVQM EIARHIEMITRGVEGFVIDRTPADVMAYTLDLVGQTNEDRCIELALDIEQFCHKAAISNF NAIAGLRPGVELSSKDLARPQRGSLDRLYVARIDALMCGELTKINTLPQTGDLQVFVISE KCRTVEARARSVLRVLDRAAENIERRITGRVTFH >gi|333596723|gb|GL892089.1| GENE 72 59088 - 59564 357 158 aa, chain - ## HITS:1 COG:XF2331 KEGG:ns NR:ns ## COG: XF2331 COG0262 # Protein_GI_number: 15838922 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Xylella fastidiosa 9a5c # 1 123 25 153 188 109 46.0 2e-24 MKMIAAVGRNYEIGIGNELPWRCPTDLKLFKQLTKNATVVMGRKTMESLKRPLPERHNLV LTRSRGYIPNGFYPAGIDDVLRLPDPVWVIGGGQIYSLFMPHVEEIWLSHIGVDVPGADA FFPAPMMRSLGFVPVETAYTQRANEDEPGFLQIVYRRS >gi|333596723|gb|GL892089.1| GENE 73 59561 - 59974 260 137 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0118c NR:ns ## KEGG: HCM2.0118c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 137 1 137 137 266 100.0 2e-70 MARGMYVLCEIEGVLARASHRKAVSDADAGALIAGDELIFPTSRMLRGFARSGAEVVLIS SRPEALEGPTKRWLKDFGIDYDWLHLVPRGVSFETHIKRTLAEHKGDLLIAALVHDPRLR SALADSHQRPTIYEVSQ >gi|333596723|gb|GL892089.1| GENE 74 59976 - 60926 831 316 aa, chain - ## HITS:1 COG:ML1519 KEGG:ns NR:ns ## COG: ML1519 COG0207 # Protein_GI_number: 15827801 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Mycobacterium leprae # 8 316 46 266 266 174 33.0 2e-43 MLTGGSVPLISGKAVNLKPLLVELEWYLKGTGNIQFLKDNGVKIWDAWADENGDLGPVYG KQWRRWEDTRIVSHSEYLSKIDTFRERGYKVEGYLGVSEDRVVLSREIDQLQRIVHTLRT NPTDRRILLNAWNVGELEDMKLPPCHFVFSLWSRELDFETRLTMATDIGIQHNRHGHESI YTQMLCLLERDGGITENMLDELGIPKRILNSCLVQRSVDTFVGMPFNIAGYGILTHFLAK ITGHMAGAFVHFGFDVHLYDNHMEGVEELMKREPPKESDPVVIFPHEWAELDDFKWEGVQ VCGYRPLPWIKVPVAV >gi|333596723|gb|GL892089.1| GENE 75 61269 - 62165 837 298 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0120c NR:ns ## KEGG: HCM2.0120c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 10 297 1 288 309 572 99.0 1e-162 MKSKGKKEDMKFTKLTDHLKLAADKLVGFKPEPYELNPGFGKATESIYLMVDQFHTLFQH PRRAIPDPALLRLRAKLIHEEAVTEGIPAAKNGDMTALLDAMADFLYVGVGTMVAIKGGI STGMSYYTQEQSVDRFIHTIMVPGNTVFDDMAIPFEEAKEAALMLNALADKLEAKPISDS ELVQELRRVMNKIYVACMMTYRLADFLGIDIVELVAEIHRSNMTKLWPADAEERRVAVEN CKYDKGDLGFRHAEGTDMMIGFRVSDGKILKSPTYSDVDLTRFVEKAKTSSLYEMVKK >gi|333596723|gb|GL892089.1| GENE 76 62221 - 63363 1293 380 aa, chain - ## HITS:1 COG:HI1660 KEGG:ns NR:ns ## COG: HI1660 COG0208 # Protein_GI_number: 16273547 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Haemophilus influenzae # 1 378 1 375 376 450 60.0 1e-126 MTYSTFRLGANDATKEPMFLGQSVNVARYDQQKYRDFEKLIEKQLSFFWRPEEVDITTDR IDFNTKLQEHERHIFLSNLRYQTLLDSVQGRSPNATLLPLISIPELETWVETWSFSETIH SRSYTHIIRGMVDDPSIVFDGIVTDEEIISRAVSISSEYDRLYEMTCARQHLGEDEFERL YVSEFDGKPYPLQRQLFRTLVSVNALEAIRFYVSFACTFAFGERKLLEGNTKIMRFIARD EALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQEMRWADYLFKDGSMI GLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNKWLLSDTLQIAPQEAEQSNY LVGQIDSAVDRSGLSQFADL >gi|333596723|gb|GL892089.1| GENE 77 63471 - 65786 2468 771 aa, chain - ## HITS:1 COG:STM2277 KEGG:ns NR:ns ## COG: STM2277 COG0209 # Protein_GI_number: 16765604 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Salmonella typhimurium LT2 # 4 771 7 761 761 988 63.0 0 MISIVKRNGSTEPLSEEKYNRVVMWGVENIRNVSASAVAMGAAASIFDGMTTCQLHEALV KSAADLISPETPNYSQVAARLSLFKIRKDAFGQYDYPNFYNHIVSNVSRGVYDEDLLKYY SQEEIAELGVYIKPKRDEYFGYAATVQLASKYLVQNRVTGAIYEGPQQLYMLVGMCLFQN WEDGCAGKTRLEMVKGFYDVTSTFKLSLPTPIMAGVRTPTRQFSSCVLIEAADSLKGISA ASSAIIDYVSRRAGIGIGFGRLRALGSEIRNGEATHTGVIPFLKHFQTAVKSCSQGGVRG GAATAFYPIWHLEVESLLVLKNNRGIEENRVRHLDYGVMINRLMYRRLVRNENITLFSPH DVPGLYDAFFVDQDKFEELYLKYEADESIRKKSIPAVDLFSTLMQERASTGRVYIANVDH MNDHGAFVPEIAPVHQSNLCMEITLPTKPLAFTDDPNGEIALCTLSAFNLGAIRTLDSLK DVAFYAVAALDSLLDYQDYPMAAAEIPAKARRSLGIGVTNFAYYLAKNGFNYSDAAGNQL VHETFEAIQYYLLDASCRLAEAKGACDWFSHTKYAQGQLPVDHYRKTLDTNPETSFELKM PWEELRGRIREHGLRNSTLTAQMPCETSSQITNSTNGIEPPRGPVSVKSSKDGIVKMVVP DFAQLKDQYEYLWDMPDNRGYLTKVAIIQKFFDQAISANTNYDPTRFPGDKVPMMKLLED LLFAYQQGVKTLYYHNTRDGAGKRDDDDQVSEPSAAEVVEPEDECDGACKI >gi|333596723|gb|GL892089.1| GENE 78 65864 - 66433 389 189 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.38c NR:ns ## KEGG: YPMT1.38c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 189 1 189 189 379 100.0 1e-104 MSKTIRVVGVDPSMSNFGLAIGTLDLETDKLDIHGLTLVETKAGGNKKTVRVNSDDLRRA NEIWRTAKPIIEQAHMVFCELPVGSQSSRAQTSYGICIGVLACVDKPLIQVTPNEIKHYV GNKLTTSKEEIIQWATQKQPNAPWLRRKQSGKEVLVNKNEHLADAVASIYTGMQTDQFRQ VRDVLAGIL >gi|333596723|gb|GL892089.1| GENE 79 66445 - 67191 121 248 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0124c NR:ns ## KEGG: HCM2.0124c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 248 1 248 248 486 99.0 1e-136 MSFNLSRTQFLQMFAVMQSIKLINHHTAKAAAPALLWKNENINDDQFSVLTSLLSSTPLM PSLSMLPSGSTAPILINPFTEGGYLPHSGPGFVVIPETGTLNIQENALFNAMETHISTAF TNLIRHANARADHVAMPGAAFASFSVDYDRHAPISKRAKLCFYEEGCEVAVIEVLLPHVF SANETAARHLIDIMRHFIGQSMIDADIAAGVLTNDSIHVVSDIPKPPTREPEKTLEQKLM ECPTWATW >gi|333596723|gb|GL892089.1| GENE 80 67181 - 69097 1339 638 aa, chain - ## HITS:1 COG:YPMT1.40c KEGG:ns NR:ns ## COG: YPMT1.40c COG0419 # Protein_GI_number: 16082825 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Yersinia pestis # 1 638 1 638 638 1069 99.0 0 MKFLKLQVENFMALASAEVELDQRGLVLIQGVNSGDSSAASNGAGKSTLMNSLMWCLYGE TAHGVKGDDVLSTGHEKNCRVMVTVEDEGKRYAIIRHRKHKEFKNRLIVRGEDGDMTKGK DTLTQEFVERLIGASKEVFMASIYASQEAMPDLPGMSDKNLKTIVEEAAGVDRLTRAYAI ARERANAAAARMDVTKSKMDACLTLIETAQSEIEAAKASSDSWERDRGERLDKARVDLAG AEVTLSEVVMEIRSLPEQIRDTENAIAGERSKLASKEEHDAKLLKVRGAITEIRSSIRTS EAAQNESMNRARSFKTKAEEVNTKVGAPCVTCGKPYCEEDLSTVKESFIEQARNEIGQAQ ASAAAVAQHKARLEKALGIESALVAATPDVSEIIARIERLTNELSALRHREREVVAVEAM VARARTDVNRIMAEVNPFLAVIKRHEDNLAANKSNHAVLKKELKSIQEQALLLEKARQVY SPAGVRSHILTSVTPFLNIRTAEYLNTLSDGNIVAEWSTMETTKKGEYRDKFNISVTKTG SSKSFQTLSGGEKRKVRIACSLALQDLVASRASKNIELFIGDEIDDALDTAGLERLMGIL EAKARERGTVMIISHKEMKSWFRETITVEVKEGRSYVV >gi|333596723|gb|GL892089.1| GENE 81 69124 - 69369 94 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAFSQLKLRVGWERSAFQYALFAQSSQIKRHRVSVGWVGLVEHHRLASFKSFHRGDEVP KAPRMARTHIASALSASVRIS >gi|333596723|gb|GL892089.1| GENE 82 69327 - 70412 890 361 aa, chain - ## HITS:1 COG:YPMT1.41c KEGG:ns NR:ns ## COG: YPMT1.41c COG0420 # Protein_GI_number: 16082827 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Yersinia pestis # 1 361 1 361 361 680 98.0 0 MTLPYGVISDPHYHRWDAFATTNADGLNSRLEIQLDATKEAAKAMKAAGCKYMLVAGDTF HVRGAISPSVLHFVTETYEWIIKELGLEVVMLAGNHDLETNDSVYSANAAASLRSIGVEI VCGKRPHSIKMGDVTVHLISWRNNHAELISDLKTLRSGLDGDNHDVVVHTSINKAIPTMP DVGIDAQELKDIGFRLLLSGHYHNHKEVLPGVVSIGALTHQNWGDVGSLAGFMIVNPDGT FTHHETSAPKFVNLEDDVEDDQIRGNYVRFRAVVESDEEGIKIQNVLKTMGAKGVVCNFI RKASMMEGTASTAETSKIDSLGESVAAYCKIVHDTDGGFDLSKLDMLCQEILTEAESAEA M >gi|333596723|gb|GL892089.1| GENE 83 70588 - 71082 517 164 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0129c NR:ns ## KEGG: HCM2.0129c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 164 1 164 164 328 99.0 4e-89 MSEFYSRAATVADMPFIMGEFEDGARKGHFYEEILTSKGGKTFEKQTRLAIQTNEQGQYS GHYIYILLRRSDDKKAGLIWFCAALDPTGAPRLELRAVSIVKELRGKGYGSMLVSDMIDS NPSQPMMAKCYVKSSQMADMLKRRGFHLFDTSPKGTQMLFRDPK >gi|333596723|gb|GL892089.1| GENE 84 71158 - 71802 445 214 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0130c NR:ns ## KEGG: HCM2.0130c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 214 1 214 214 447 98.0 1e-124 MDLKRTRWVRRLEDGSYTIESNTSLNKQKLLCDLCGIASKCPINETRLKLHDAGAHFHLN SCIRYVPLLAFRKPIIGLDAPYFNTFRSGVTWRDRVEPGKLVCLVEADTGNIIRFGRVDK VYSGPVDEMLRKHSRFNHLCMGGEKIEKVGEVIRKSYGHFLNDDSLLTAIYIRHVDREFD TEYHSAEELNLVDPRPKAGVIDISVARQKPPETF >gi|333596723|gb|GL892089.1| GENE 85 72547 - 73602 452 351 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0131 NR:ns ## KEGG: HCM2.0131 # Name: repA # Def: putative replication protein A # Organism: S.typhi # Pathway: not_defined # 1 351 1 351 351 655 100.0 0 MSENGNKNIAIVEAFSETDKKTGEVVTLVPNTNNTVQPVALMRLGLFVPTLKSTARGRKG QMVSMDASAELKQLSLAKAEGYEDIRISGVRLDMDNDFKTWVGIIHAFAKHKVVGDTVTL PFVEFVRLCGIPTARSSAKLRKRLDSSLTRIATNTISFRSKGSDEYYVTHLVQTAKYSTK NDTVSLQADPKIFELYQFDKKVLLQLRAINELSRKESAQALYTFIESLPPDPAPISLARL RARLNLTSRTITQNATVRKAMEQLREIGYLDYTEVKRGSSVYFIIHYRRPKLRPALPPTK AAPEEPEDILPGDDQEDIIDVVPEEKEGEMVMLSKEELAILEELRKAKARK >gi|333596723|gb|GL892089.1| GENE 86 74171 - 74383 339 70 aa, chain - ## HITS:1 COG:no KEGG:YPMT1.45c NR:ns ## KEGG: YPMT1.45c # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 1 70 2 71 71 125 97.0 4e-28 MAVTLAGLEIEKTSGYWRAKGFKQPGVLERLEREDGVIVHQRREWRMYDPETGKLTTKAG TLWGLLKKIH >gi|333596723|gb|GL892089.1| GENE 87 74383 - 74718 480 111 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4079 NR:ns ## KEGG: YPDSF_4079 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 111 1 111 111 194 90.0 9e-49 MKKLALALALLSLPVYADTHVYECEMSVAEVKNDVIRNVVKASYGAMVVDSGEQFYVVRD DRVLSSPYLTKRNGKLSGVGEDKFVYNKSGDVYGVHAKNASYLFDDCKEVG >gi|333596723|gb|GL892089.1| GENE 88 74715 - 74894 94 59 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0002c NR:ns ## KEGG: HCM2.0002c # Name: not_defined # Def: putative periplasmic protein # Organism: S.typhi # Pathway: not_defined # 1 38 1 38 101 71 100.0 1e-11 MKTVLDTLLLIVSIAFVLDCIFTGAIRKALAPVNGAMVNALAVVLVFDSAFGVIKGVVA >gi|333596723|gb|GL892089.1| GENE 89 74935 - 75210 97 91 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0003c NR:ns ## KEGG: HCM2.0003c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 91 1 91 91 166 97.0 2e-40 MKILVRISASTDYDVYPLFMVKCDGLNDEEIQAAIERNLVEYTGIDADSVYVDDDGVCWH NGSCWYVDDTMPVSDEDAAHLERILGISTFE >gi|333596723|gb|GL892089.1| GENE 90 75279 - 75689 401 136 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0004c NR:ns ## KEGG: HCM2.0004c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 136 1 136 136 254 98.0 9e-67 MKKLYDAANAALDVVDTEIAQGFPEPEWATQLREAIAEMNAPEPSEDEADWQRFIRMYAE EIGPTPTAEQAMLLKYFKEAGENLPVDDTPHWFHAAWRKFDVIYTRGMGSKDMVVWHLMH IDKAVDRTLEKFFSPA >gi|333596723|gb|GL892089.1| GENE 91 75673 - 76044 174 123 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0005c NR:ns ## KEGG: HCM2.0005c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 123 1 123 123 256 99.0 2e-67 MKNYSEMTDFEINCLVAEATGHRPLISQYGWKGSQEGDYTAVVAIGPNGAGTFDWCNDPE DAWDIIYRHRIGVIPARQPGEWRAAHRKVDSSTPQHLIQNPNPFRAAMTVFLLMQEKKRE ETV >gi|333596723|gb|GL892089.1| GENE 92 76207 - 77037 962 276 aa, chain - ## HITS:1 COG:YPMT1.49c KEGG:ns NR:ns ## COG: YPMT1.49c COG0330 # Protein_GI_number: 16082838 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Yersinia pestis # 1 276 1 276 276 531 99.0 1e-151 MKKGLLAVALAAICTMGLTGCDRVEPGYVGIKVNKLGEDKGIGEVVGVGRQWTGLNTELY TFPTFKQMKTYDEPFTFQMSDGTAIGHKIGVAYLVNRDKVTTVFQTYRKGVDDITDTDLR QKIADSLNRLASRMTTDTFIDGGKASLLDNALKDIQAEMSPVGIEVISLSWVGKPDYPDT VIESINAKVTANQKTLQRQQEVEQRKAEANMLREQAEGEADAIRKRAQAEADAIKLRGEA LRQNPNVMELEAINKWNGQLPQYMTEGANTPFIALK >gi|333596723|gb|GL892089.1| GENE 93 77041 - 77241 173 66 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0007c NR:ns ## KEGG: HCM2.0007c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 66 1 66 66 100 100.0 2e-20 MIKGYLMAVSAVISVCFIYGLLVPSLISAKSDLALFIGLAIAVVFPVALLKAGRRYINSL NKTKEK >gi|333596723|gb|GL892089.1| GENE 94 77332 - 78408 1061 358 aa, chain - ## HITS:1 COG:YPMT1.50c KEGG:ns NR:ns ## COG: YPMT1.50c COG0468 # Protein_GI_number: 16082840 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Yersinia pestis # 1 358 1 358 358 710 99.0 0 MAKGKSALALALKKKIGSNDEIQKVSHWIDSGFPPLNKAISGRYDGGFPCGRIVEVFGPP SAGKTFLATAAMVSAQKQDGLAVFLDHENSFDVGLAVANGLNADEDDGQWVYKQPDTFED SVELIGTILKLVRDEELIPETAPICIVADSLASMVPNSKAEKFDKMAEGTAKDKDQLNMN DNTALARATSANFPTLALWARKYNACIIFLNQVRTKIGVMFGDPTTSPGGDSPKFYASVR IRLGASVMKDGKEKIGQDVGAECIKNKVAPPFGKCSWKFYFDPTRGLDVIESLVEYMLEE GYLPKNASGRVEIGDKKYTKSQIVEMYREKPLPEIIAALQAIDERRAKESSPAETEEA >gi|333596723|gb|GL892089.1| GENE 95 78411 - 78677 312 88 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4085 NR:ns ## KEGG: YPDSF_4085 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 88 1 88 88 148 100.0 7e-35 MLKSIINGGATTPTMLAKEIVFCHGEHAVVALPNILGAAGISATEREFALVSEQVVKIIA RVAKHLNHDAIKFDEAAASKRINESKGA >gi|333596723|gb|GL892089.1| GENE 96 78677 - 79621 756 314 aa, chain - ## HITS:1 COG:YPMT1.51c KEGG:ns NR:ns ## COG: YPMT1.51c COG0258 # Protein_GI_number: 16082842 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Yersinia pestis # 1 314 1 314 314 617 99.0 1e-177 MNYLFVDGNSLGYYHQQSDKLHNGEMEVQAAFGFVKNVRRYASILHARPMILWDGFSDKR RDFYPEYKANRDDDPDMKKMKEGFAIQKPYILKMMTALGVNQLIAKDAEADDLAGMLVSR LAPQPTVDRIYLLTGDGDWLQLVRENVSWVSLREDAKHKQVNFEQFAELTGLPTPRAFLE AKALQGDNSDNIKGVGGIGDGGAKELLHEWGSVAAMVRGINDGSIVINKGRYKTAFNKLA KNAFNEKTGCRMLEAFKRNMMLMNLIDTKFPPSEIESIKGARDMNAFEQMCYELNFRSFL EDLEVFVLPFERYC >gi|333596723|gb|GL892089.1| GENE 97 79682 - 80710 776 342 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4087 NR:ns ## KEGG: YPDSF_4087 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 342 1 342 342 607 99.0 1e-172 MSKSLLDLLNKTRGDIASKRGNNVDLTRLKDGNNYLRIFPNKDDPNGVFFQTFGMHYVKH QNEEGKDVTTAYICEQHTHGHACQLCEMVMEGRARFKGNKAMEERINSMRATPRYLVNGV LSAREDFADAEKCQLIELPSTVFDDICKVMSEDIADDIGNPLSKEEGYAFLIKRTGSGRD TKYDVSPKRKVYKGDIPEKLWTTQHDLIAYANQADETRLLSTARTMGRLIGIAAPAATMS SPAISSAAKSAAAELPGFGSITGHTEGAAAVATAHTPAPESTSLVDEEILRAAEAEFKPE TKPEEVKAPEAAAAASASASAAAASAPADEGLDDLLAELDAL >gi|333596723|gb|GL892089.1| GENE 98 80830 - 81261 562 143 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0012 NR:ns ## KEGG: HCM2.0012 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 143 1 143 143 243 100.0 1e-63 MSTDIYEKIMSDLEFDRDNLEEVWRQQPRLLMEYGSKLARAEREVADAKLSLDAIEAKIY DNERKNLSMNGIKFNESVLEAKVRTNPQYLAKRQKLDDARHIADLYKHAVAAFSHRRDMI VQASKMAIVEIERLGAERFHSPR >gi|333596723|gb|GL892089.1| GENE 99 81820 - 82383 334 187 aa, chain + ## HITS:1 COG:no KEGG:YpAngola_0103 NR:ns ## KEGG: YpAngola_0103 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Angola # Pathway: not_defined # 1 187 1 187 187 314 86.0 1e-84 MALYNFTLTLSGVTYETEGLEDALYESGCDDALICAYGNSVYVEFDREAESLDAAIASAV DNIESAGIGAIVESVDSALVGLSDIAEITEMSRQAIAMLKDGTRGSGDFPCPIQRIKGQS PLWDWADVAEWLLKNGRLKEDSNLVNNARVLSKWNLALRASASKDFQEVESIAVALIARR RHHAECA >gi|333596723|gb|GL892089.1| GENE 100 82413 - 82838 464 141 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4090 NR:ns ## KEGG: YPDSF_4090 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 141 7 147 147 256 100.0 1e-67 MNEAQKIAQALAAIPADFQDKAVAATMRSQFWEIIDCPVTLDLALAFAGLDGADKVSRLR KCARALALKTQDPKACQYLLEIYESDNPEEQLEAFKVFRNRLVLKVAKEFMEVNKIGDVR QYRLKRQTRVTLSNIFGKKVA >gi|333596723|gb|GL892089.1| GENE 101 82853 - 86371 2868 1172 aa, chain - ## HITS:1 COG:aq_1008 KEGG:ns NR:ns ## COG: aq_1008 COG0587 # Protein_GI_number: 15606309 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Aquifex aeolicus # 4 951 8 915 1161 430 32.0 1e-119 MKALMVRTDFSLGESALKAENAVKIARDAGYTAVISADSMNIASVIPLQRAAGDDMAVIC GVKLNVVDDPTYEHRARLAKESGGCMESLVRDRSYCFTALIKNEQGYRDVCELMTLANKR EQFYFVPRLALDQLAAAYAKGNIILLTSDIGSVFQRQDFAKIIGTLVTAGGRDNFYSVVY PHPTPFYDQINVRAMKVASALKIEPVAFYPAYYEAVDDADIKDIAHMVTNNIKIDQPHRL RIPHQRDNAVNGRRHLLEALKAFSVRMDVPVTAAMASTTQDTIIEACTWRWHELPPALPK MADDEPATLMKLAVAGLRKRLTTKEFGYTPPASEHRVYVDRLKYEMDTLTRLGFCGYFLM VRDLMNHSRETGIPVGPGRGSSAGSLVAWCIGITNVDPIRHGLLFERFINPERLDLPDAD LDFSQARRHEVIEYLNERYGEDYVAGIPNFTYLGAASALRDTARIYGVDAADMAVSKEFK NLEDDSLSLEELREQLASLDKYATKNPEAFKAACKLQSLMRGFGRHAAGMIVAGVPLVER TPVELRGNARCIAFDKRYCEAMGLIKLDVLGLATLDLLDSAKRYIKESTGEDINLDAIPL DDRKVLDGFAAGYTQGVFQLESGPMRKLLKDLGGGIEPMSFKTVVATTALFRPGPIQSGM LDDYVSVAKGFMAPQSLHPVLDELTAETNGVILYQEQTMNATRLLAGFTMAEADGVRKAI GKKDMEKMKSMGEKFVVQAQAGWIDVEMEDGTTQRIHRAEHFKCEDGALRTVEEALEAGV KLPMAAVRVTGSQPGLSETKAKEIWDAFEKNGAYQFNKSHSVAYSLISYQSMWLKTHYPA EFFAAALTILGEDKHQGLVKDALTYSIRVLPPDVNVSSNRIEIRTLEDGSQVLYAPFSAV KGCSENGCQAIMRAREKVGGKFESLEQFEEAVEKRACNSRVRESLQKVGAFASIEPGSLP ATDPERLRDQAELMGNLVIDAVKASRPFEMNPKRSAEVNVLMTRMAAEMGLGDDLIRPSI GIKPKIMVILDNANGNDGRTGYFMENGYDDFKAKLLTAGDLRMGDLYVTGVCKKVKDKEK DYTKDEIGQFTDFMREEINLVRPTYVLTCGSRATSLFNNKSKPSDLVGRKEYLPELDVTV FYGFNPNILYFRPEEGEKLEAILAEVAETISK >gi|333596723|gb|GL892089.1| GENE 102 86552 - 87787 892 411 aa, chain - ## HITS:1 COG:YPMT1.88 KEGG:ns NR:ns ## COG: YPMT1.88 COG0714 # Protein_GI_number: 16082881 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Yersinia pestis # 1 411 1 411 411 836 99.0 0 MTATALQQEEHLPEAIVCKWCGKSFHYLKSHISMGRCENIPESAKGLDVDEVVKMYTTAF PDEPTISRTALAKLNEKRAEKHSGEGKVADISAHPGYAGTVEYKTELVAAHELLGVTIKE LGTPRGKPLQVTVNVNTPYPEFVPEAKKNYVYGDFDLIKDIFMMLEIGIPGYLWGHAGTG KSSLPTQLCALLNRPLIRAQHTASMEEAHVTGQILARDGSTYFEPGLLALAMKNGWVYLA DEYDFAFPQILGVYQPVLEGEPLIIKEATPDWRRITPHKRFAFIGTGNTNGSGDETGLYQ GTNIQNAANFSRFGIVSNVKYMSTKAEVNMLAEAGVIREYAEKMVKFANLVREGYEQHLI SQPIGPRELLLSAKIGMMRGDFSAGIEKSFINKLPSTSAQAAREVVQKIFG >gi|333596723|gb|GL892089.1| GENE 103 87884 - 90250 1194 788 aa, chain - ## HITS:1 COG:YPMT1.87 KEGG:ns NR:ns ## COG: YPMT1.87 COG4547 # Protein_GI_number: 16082880 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) # Organism: Yersinia pestis # 1 788 1 788 788 1380 96.0 0 MSKAMTRSVLKEVQDFRDCVKRVVAMLSGKQIPVAERGNEAYVRYNRRGEPVLVNIPSIP DDASPTLMNAVRGFLDHEVAHILFTDPKVAMKMRERGKAPSTGLWNALEDVFIERRMGQV FNGTRRNLLATQNLVIDKYFKGKVSEAVSICHGDQRELFLKFFLCPVVRAWDGQSPFIDF MEEHWHLIDKPVALLKEHGIDVAVRNMSNTEDCVKVAAAIAQIMQDMKDKPEGKLPELKS SARKPSKSEDESEETPEAGDEPTHSESAPKRTKGEDDDKEEQEDDASEEEESGDSDLPES VDKDLPTEDKEISDTESKYTEAGEEESGDTPESDDAGMESGDSDDEGGSDDTGSPTPGDG IREDADDSDGYGSGAAGDSDGDDGEDSDASHGESEGEGEEEDDAADHTDGEGKENEDAAE APEDSESGFVPAPDEMTLEDALKALDEMEDGTGEMTEDALSATISKELMSTSLSEYRPYD RSYDFIGLIDEAEEHVKRTRKTFGAIPMHSPVDRYRMVPEGRRLFELKIEKHLSAGVSST LAKDLERAIASRNRVQFIPGQRRGRIHGANLYRLAMNDDRVFRKKEDHRAVNACVQQVID LSGSMGGRKIQLALASAYTIADALDRINVPNIITGFTTFGSPDYETMSKRGFTRFEALML PIIKNWNEKANSPEIRARMGCVCETFPLLNNVDGESVAQLATLFAGRMEDKKIMLVMSDG APCAAGDGFHQHLRTVTKEIETLSDIDLMAIGVLTDAPRRYYKNYALVNSVEELGPSVVT ELSRIILG >gi|333596723|gb|GL892089.1| GENE 104 90360 - 90572 91 70 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0018c NR:ns ## KEGG: HCM2.0018c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 69 1 69 70 111 86.0 9e-24 MKNITSKLTALEVGHAYAIGLDGVATILTELESEELPVEMVDTTVFTFELKNKHFTLINT GCGSLAVRTI >gi|333596723|gb|GL892089.1| GENE 105 90836 - 91222 364 128 aa, chain + ## HITS:1 COG:no KEGG:HCM2.0019 NR:ns ## KEGG: HCM2.0019 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 128 1 128 128 222 97.0 3e-57 MATNETEIKQGRYAAYIDSLITISPKSQATIAKEVGYKNANNLSLIKSGKIPLPVDKVRA LAEALEADPVRLMLMVLEERHPELLEFFREEGTAPLSADEKLVLEAFRNRFDGQQGASEK VVEAIKSL >gi|333596723|gb|GL892089.1| GENE 106 91214 - 92104 256 296 aa, chain - ## HITS:1 COG:YPMT1.85 KEGG:ns NR:ns ## COG: YPMT1.85 COG0582 # Protein_GI_number: 16082877 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 295 98 392 392 578 95.0 1e-165 MPHISDVKVSDISRVLVNQLVNPLILEGKIVQGRRVFSLMKQFLSWCAFQGLIDTSPLND ISLNRVAGGAKPVPRERKLTDAEVWVFWNVWDYFNVCEGTKWAARLCLVAARRPDEVLRA RKDEFNLQRDVWNQGTRNKSARQHALPLSPLMRQCVEELFEYGKDSQWLVPSNKKKGVDT PMSKVAIAQALRRILERPELMEVESFTPRDLRRTARSYFPALGINQEVARKIMNHSLEGI DRVYDRHDYMDEMRDALNNFSTYIASIVNQTDLDEIDHKFKGDRLATELIRVNFSQ >gi|333596723|gb|GL892089.1| GENE 107 92901 - 93425 307 174 aa, chain - ## HITS:1 COG:no KEGG:ECL_A184 NR:ns ## KEGG: ECL_A184 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 46 173 55 182 183 62 32.0 8e-09 MKDSITKIAMVVALALSSLSHGSYAKDHTHERSAITSGASAPSLAELRESVGKIQEVTAD GREIYARLDALAEHDFEQAKFAAEGLRADVIGSLAIAEFLFQALPEMSIIRSYDKNSTEY KLCRAVAEMRHGAKNLDNLVNQILTVSPLRESEISHAALAVLAASGTEASTKWL >gi|333596723|gb|GL892089.1| GENE 108 93522 - 93767 215 81 aa, chain - ## HITS:1 COG:HI1532 KEGG:ns NR:ns ## COG: HI1532 COG0695 # Protein_GI_number: 16273432 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Haemophilus influenzae # 1 77 1 78 87 83 55.0 9e-17 MKVVIYGRDNCSYCKRAVELAKQLHGHGFGDYEYIDIVSAGIDKEKLSDLVGKPVETIPQ VFVNGEPIGGYTEFAAFASTL >gi|333596723|gb|GL892089.1| GENE 109 93767 - 94132 393 121 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0024c NR:ns ## KEGG: HCM2.0024c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 121 1 126 126 173 69.0 2e-42 MTDMDIEKEIVAKGKTAARVTPERIEAVISGEFYFTGADGYRSSPLWLKQEEPEPAPQSL ELLTFCVLVLENGYTVTGESACASPENFDPEIGRKIARQNAIAKIWPLEGYLLKQQLHEV K >gi|333596723|gb|GL892089.1| GENE 110 94148 - 94351 108 67 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0025c NR:ns ## KEGG: HCM2.0025c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 67 1 67 67 75 67.0 5e-13 MTKEYLPHQQRVIEEQEDLSRRIFKLECFTATEIFSRLPQVDRNMLIKQLDAMKAYELIL RARIARF >gi|333596723|gb|GL892089.1| GENE 111 94362 - 95135 524 257 aa, chain - ## HITS:1 COG:STM1126 KEGG:ns NR:ns ## COG: STM1126 COG1702 # Protein_GI_number: 16764483 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Salmonella typhimurium LT2 # 1 256 23 283 284 339 64.0 4e-93 MGNKRKQARRAARQALKSKPRIHGYEIDTIIVDELAAAPALPPKPKRDNSPLEARNEAQA HYLISLDTKTLTFATGEAGCGKTYLAAAVAAQRLLNKEVDKIIVTRPVLQADEDLGFLPG DMSEKFAPFFRPVYDVLQKRLGGSFLEYCLKPEVAKVEIAPFAYMRGRTFENAVVILDEA QNVTASQMKMFLTRMGENVTVIVNGDITQCDLPGSVKSGLEDAMERFKPSEYVGRIEFES EDCVRSELCKIALEAYQ >gi|333596723|gb|GL892089.1| GENE 112 96377 - 96682 268 101 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0031c NR:ns ## KEGG: HCM2.0031c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 101 1 101 101 186 100.0 2e-46 MSNLTSFDWWLATYLVAAGVGYAFYIGQLIVKLLLIRFASHKRIDDGLWRLGSLLETHYG ELKENETITIQAKRFTAIITRTPEQKVSLIKKIATERVTEK >gi|333596723|gb|GL892089.1| GENE 113 96882 - 99686 2236 934 aa, chain - ## HITS:1 COG:CAP0093 KEGG:ns NR:ns ## COG: CAP0093 COG4644 # Protein_GI_number: 15004797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Clostridium acetobutylicum # 317 913 2 599 673 481 39.0 1e-135 MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRF PGVILGADEPPFPPLLRLVANQLKVGIESWDEYGQREQTRREHLVELQTVFGFQPFTIGH YRQAVQLLTELAMQTDKGIVLARALIEHLRRQSVIVPALNAVERASAEAITRANRRLYDA LAEPLTDVHRRRLDDLLKRRDNGKTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPS GIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALAIEGMATVTDEIIDLHDRI LGKLFNAAKNKHQQQFQASGKAINAKVRLFGRIGQALIEAKQAGRDPFAAIEAVMSWDAF AESVTEAQRLAQPEDFDFLHRIGESYATLRRYAPEFLDVLKLRAAPAAKDVLDAIEVLRS MNSDNARKVPTDAPTEFIKPRWQKLVMTDTGIDRRYYELCALSELKNALRSGDIWVQGSR QFKDFEDYLVPPAKFASLKQASELPLAVATDCDQYLHDRLTLLETQLATVNRMALANELP DAIITESGLKITPLDAAVPDTAQALIDQTAMILPHVKITELLLEVDEWTGFTRHFAHLKS GDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHIRDETYGAALAELVN AQFRHPFAEHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFH TKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLG DTKLYIPKGDATYEALKPMNGGTLNIKHVRAHWDEILRMATSIKQGTATASLMLRKLGSY PRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEI RDRSFEQQRYRATVKPSMTACCSTCRRSAGSTST >gi|333596723|gb|GL892089.1| GENE 114 99845 - 100135 195 96 aa, chain + ## HITS:1 COG:AGc4229 KEGG:ns NR:ns ## COG: AGc4229 COG1669 # Protein_GI_number: 15889603 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 96 16 112 112 108 62.0 3e-24 MRPSVVLDMKRSAVREAVGRFRAANPRVFGSVLHGTDRDGSDLDLLVDALPGATLLDLGD LEEELKSLLGVDVDLLTPGDLPPKFRAKVLAEAQPI >gi|333596723|gb|GL892089.1| GENE 115 100132 - 100533 367 133 aa, chain + ## HITS:1 COG:AGc4225A KEGG:ns NR:ns ## COG: AGc4225A COG2361 # Protein_GI_number: 15889602 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 109 1 66 77 74 46.0 5e-14 MSENRLPDYLDHIQQAATDARSFVEGMAKDDFLADKRTQQAVIMSLIVIGEAATKVMDGY VEFTQAHADVPWRSMRNMRNRMAHGYFDINLDVVWETVQEWLPALLQQLPAVRQDADDED RNDNCERGISDDC >gi|333596723|gb|GL892089.1| GENE 116 100523 - 100879 130 118 aa, chain + ## HITS:1 COG:sll1163 KEGG:ns NR:ns ## COG: sll1163 COG1917 # Protein_GI_number: 16330416 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Synechocystis # 6 113 23 130 135 85 42.0 2e-17 MTVESRIFSVAEYVQPSEGEPIRSVVLETRDSIIVVWHVHPGQEIAAHIHPHGQDTWTVL SGMADYFQGNGIVRALREGEIAVARPGQVHGARNTGTEPFVFVSVVASANAGFVLAER >gi|333596723|gb|GL892089.1| GENE 117 101134 - 101460 292 108 aa, chain + ## HITS:1 COG:no KEGG:Bcep1808_7242 NR:ns ## KEGG: Bcep1808_7242 # Name: not_defined # Def: hypothetical protein # Organism: B.vietnamiensis # Pathway: not_defined # 1 108 1 108 108 160 99.0 1e-38 MSRSRRKTPIVGHTTCGSEREDKKLWHQRWRTRESTALTSASPEALSAHLPLLENQASSV WSMGKDGRSYWPVKRQAATADRIANHKGRNPQERASLKKRLLRKWMSK >gi|333596723|gb|GL892089.1| GENE 118 101457 - 101957 240 166 aa, chain + ## HITS:1 COG:no KEGG:Bcep1808_7243 NR:ns ## KEGG: Bcep1808_7243 # Name: not_defined # Def: hypothetical protein # Organism: B.vietnamiensis # Pathway: not_defined # 1 166 1 166 166 310 100.0 1e-83 MKLSFHQHIALFWMIGAPGVFAPVIENAKRPDAGAVMAWGVAIVAVMILFTPLLLRCPPF RRWYGRTDALSERQRQALAERGLRRYYQTAFDDGYVPRVMPYVWRIIWTVGGLMAVTAVL PTNTGRPAFDALVVFSTWYPIGVMLLVFASRPLGRLIRQRAQERRK >gi|333596723|gb|GL892089.1| GENE 119 101954 - 102325 367 123 aa, chain + ## HITS:1 COG:no KEGG:Bcep1808_7195 NR:ns ## KEGG: Bcep1808_7195 # Name: not_defined # Def: hypothetical protein # Organism: B.vietnamiensis # Pathway: not_defined # 1 123 1 123 123 181 100.0 1e-44 MSTSTIEALASAWARIAEEAEFPADYEGTATPQAHRASEAIQEQIRERIVATNDMRLFSL LHLLGQASLRMEQALWPEDYERMTREVEEALRQATDANARSYTHEEVMQAMQERIDRARD KPC >gi|333596723|gb|GL892089.1| GENE 120 102319 - 102876 378 185 aa, chain + ## HITS:1 COG:XFa0019 KEGG:ns NR:ns ## COG: XFa0019 COG1961 # Protein_GI_number: 10956730 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Xylella fastidiosa 9a5c # 1 184 4 187 188 328 94.0 4e-90 MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVV WKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSIDTGTPSGRFFFHVMASLAEMERELTV ERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYRWVP ASTHA >gi|333596723|gb|GL892089.1| GENE 121 102977 - 103189 294 70 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4100 NR:ns ## KEGG: YPDSF_4100 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 70 1 70 71 118 97.0 7e-26 MIMLSKREKETLREISQWKEFYANWKPKTRAKLERMNLVANVSPKGCVENYQLTEKGHSL LQQLTEAVAF >gi|333596723|gb|GL892089.1| GENE 122 103349 - 104671 1195 440 aa, chain - ## HITS:1 COG:no KEGG:YP_pMT090 NR:ns ## KEGG: YP_pMT090 # Name: not_defined # Def: putative DNA ligase # Organism: Y.pestis_Mediaevails # Pathway: not_defined # 1 440 1 440 440 894 98.0 0 MEKLIALKHKLDAIKTMGTNAKKEALANLDEFEQSMVSLMLNPFIRFGVKKYKVAEPLDT SVPSDQKVVELLEKLAARELTGNAAITAVESLVASMCADGQDVFRRFLLKDPKAGVGISL CNKVFENPIPKFEVQLASPYKEKGDKYPFKPNPKAKWPMIGSLKLDGLRVICEVIVDEEE VNFLTRTGNPITSLDHLKPAMLERGRLSGFKHIFFDGEGTAGAFNQSVSALRKKNVTAIG AVYHIFDFFLPEWRAQAKSKEYLKTGMKLKDRLAMLVALFRNTCGEDYAQDIHLHPFYII HSHEDFIERFMKRLDENEEGEMGKDPDSVYEFKRTRSWWKLKDEDSEDGEIIDFEPGDPD SGFAHTLGKIVIRLENGVIVRASGIKHKYLDEIWNNQEKYRGRIVEVHCHEKTPDGSLRH PRLKWPKCLRDTEDRIGDKD >gi|333596723|gb|GL892089.1| GENE 123 104706 - 105182 290 158 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_4102 NR:ns ## KEGG: YPDSF_4102 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 158 1 158 158 267 96.0 1e-70 MSTRTDLSKIPSISGNNGYSLRCPEVKINGHEAHCSYTVCQHTILAYKEKRLPATSFQSC AAAIAAGKCQALKMMVEEIRKGEQLYFIDMAALIKEVEEQNDRARTLTRKRNTMTINSLV KRTKKTEPAKPETTSTDSLAPVTDVYAALIEEATKENT >gi|333596723|gb|GL892089.1| GENE 124 105264 - 106058 542 264 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0038c NR:ns ## KEGG: HCM2.0038c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 264 1 264 264 498 98.0 1e-139 MKADIQKSVTEIIDKSGVEIDTEERQKIIDEAIQTALEHIATSVSTAPLGEGSKYMRVWV RFGESPELPGVKQKRAAFVAFTRKMKDATVEVRAGAWYDGRVVYTNQAVCDEGERFEEIV DATLRAIKGRAGVEDDPSIAAFLSIVELPEVTERVTDLTTPPGLLELVVSGDTKKAVERI REVEYGIICDMCRSDLDLVRIIVDAGQACDGVLASFAGQVARLANELPMIKQEAKSYAVH HANDLLEPYRFEAAQDKMTGWATW >gi|333596723|gb|GL892089.1| GENE 125 106139 - 107323 731 394 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0040c NR:ns ## KEGG: HCM2.0040c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 394 10 403 403 808 97.0 0 MSLYGIQIPRLIKILPAKSRVKNVSDLKELLTELDFEQWLDMEGIIYRRGGVSTRGREVN IKECPVCGSSNWKVYFNLTNGVGKCFAGDHPEEIQFNKLVFLKHYSGKSRRDFEEYVQNA LISQGWAPKTEEVVLASKVELEGPVALPRHYELPIDGRLPDYLVERHISPELAKYFDLRY CVEGKHAYVDPYTDQVKGQVFDMRILIPVYDLDGVMKTFQGRDITGAAERRYLFPMQLPA SGKFLYNGHNAVGKQTVVVCEGAFDVMGVKRAIFDEETLRDYVEPIGTFGMHLSGNMNED AEDQLGAFLTLKARGLRNVIMMWDSEKQAIRNTMSAAKRLTSIGLNVKVACLGEEGLDPG DATPEQILKAYYRAKPYSRQLELQSKVLGIKALV >gi|333596723|gb|GL892089.1| GENE 126 107413 - 108753 1218 446 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0041c NR:ns ## KEGG: HCM2.0041c # Name: not_defined # Def: putative DNA helicase # Organism: S.typhi # Pathway: not_defined # 1 446 1 446 446 842 99.0 0 MTELCHTGRGLSEEFDDDFQNRLAAYFCRDHEFLTRAGDLVAPNQFSNAANAILVNMVSG YYRMYKSAPSSSAILDMLKRAKRDKTIREELFPDVVEAFKRILAEKLSDTAYMVDQVATF AKSVAFDDALIKAAEMKEKGDFQGAMAIMAKVQQIGSNEATGIYDYFSESAERYKAREYE ASDDYVPNSITTGLPLLDKLLYQKGWAKREMVLFMGFAKSGKSTAMGEFSINATLAGYNV LYLSLEVHTSILSDRFDARLSETEMSKLVERRDDVHRKLAELGATKGVGSLWIVERPSGS MSPADLDRMLGSMKANGMIPDMVVVDYADLMRASYDLRDDRANIRSIYTDLRALYDKHNV AGITASQTNREGGASEVATMMHAADNIEKVRIADLVITINKTEEEEAKGEARLYFAGSRN QKGGVSIRVKQNLEQMRFIERIMDVL >gi|333596723|gb|GL892089.1| GENE 127 108814 - 109539 560 241 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0042c NR:ns ## KEGG: HCM2.0042c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 241 1 241 241 473 98.0 1e-132 MSQIFFNTINNDQYDFMTEWDTTVMDKWVAENIGLSRCKDEAELFETKWFDYRDMHPLMA TCLFTEAYKRQYSYIMLSHGREHYETAQFTTGLKRVPYQELSTANKTSLWKARQFADQYC CSYDYFISTVLSAAARRLWDKLPRPQHLWQPELIEIFEEKLAKRAVTRLDDSLVSFKHLG DMQHDPIQERYFEWVLERLRGITRDKRVRIIFSAVWLMEIVPERVIYAHFPEELEEARRF C >gi|333596723|gb|GL892089.1| GENE 128 110034 - 110600 72 188 aa, chain + ## HITS:1 COG:no KEGG:VEA_002226 NR:ns ## KEGG: VEA_002226 # Name: not_defined # Def: hypothetical protein # Organism: Vibrio_Ex25 # Pathway: not_defined # 1 155 79 262 270 65 29.0 9e-10 MWSHYAQHHRGYVVGIDTELAGFHDENLCLITANEGGIDYLDERDKSRVIISDKNFKNND IVKKVLFRKSQHWKYEKEVRIVIESDKLIPIGDDEEDRFYIYKAPGTNIIKEIFIGINNE DFELTALENDNLRNGILDNNIKIQKCCFKRGTWDLDKTDYDMSLLTDWPSADFGILAGVI SAFEKNEI >gi|333596723|gb|GL892089.1| GENE 129 110642 - 111001 396 119 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0045c NR:ns ## KEGG: HCM2.0045c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 119 1 119 119 182 98.0 4e-45 MSMRMGDLAKRKDPEEPVKSSTPMRQPVRPQGRPTRGKEKIKSRTMSLEDEYFDLLEMMK FIPRFEKFTRSDVIRAAIFHLAEKSPQEIEDIVKLNEAITAADVTMRTDEIKRELMKKG >gi|333596723|gb|GL892089.1| GENE 130 111001 - 111366 476 121 aa, chain - ## HITS:1 COG:no KEGG:HCM2.0046c NR:ns ## KEGG: HCM2.0046c # Name: not_defined # Def: hypothetical protein # Organism: S.typhi # Pathway: not_defined # 1 121 101 221 221 226 100.0 2e-58 MLLADFIIIPLRPKRRDLKSLRDIDPIIDNVRNVNETVKIRAVVNQCPSLPSQASRILAA KEIVETFGIEAAPVNLYNRNVYDDAEEAGRSIFEMTGAERDKKAEAEFEEFVDYIMSLEE E Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:49:59 2011 Seq name: gi|333596722|gb|GL892090.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD5, whole genome shotgun sequence Length of sequence - 2033 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 347 250 ## COG2378 Predicted transcriptional regulator 2 1 Op 2 . - CDS 347 - 583 357 ## 3 1 Op 3 . - CDS 624 - 1325 404 ## COG2378 Predicted transcriptional regulator - Prom 1363 - 1422 2.9 4 2 Tu 1 . - CDS 1542 - 2021 454 ## JW2614 hypothetical protein Predicted protein(s) >gi|333596722|gb|GL892090.1| GENE 1 2 - 347 250 115 aa, chain - ## HITS:1 COG:yafY KEGG:ns NR:ns ## COG: yafY COG2378 # Protein_GI_number: 16128236 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 115 139 253 285 231 100.0 2e-61 MKRKTLPLLALVATTLFLIACDDRSDDLKAISKFKDLTPPRFSDVVSHQDDVSEEWSQVD YLSGPTLQVLRTRQSPDGCEDGSYYYLVDMQEKTVQPLMNALCIADNIKLEYQEV >gi|333596722|gb|GL892090.1| GENE 2 347 - 583 357 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPVIAIIAIVVIVIILNKTGVSDSLAALTLATVAALLTGGGAAGAASVALTPFVGVPVGI FVGIYVFAKVVRLISGKK >gi|333596722|gb|GL892090.1| GENE 3 624 - 1325 404 233 aa, chain - ## HITS:1 COG:yfjR KEGG:ns NR:ns ## COG: yfjR COG2378 # Protein_GI_number: 16130552 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 233 1 233 233 428 93.0 1e-120 MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQ SGYCRLRTAGSETQMVPDVLIFAHRSGMAGLFPGFDRRLVNALLMCDESPCVIAPASPAP SPSGALSFWRLIQAITGRRRVTLIAEGQRCERLAPCRLLIHQQAWYLVAEHDGHIAVFSL DEIHLVQPLQETFRRNDSLCRLVEDPGFIQSLPHFRFIQQSLLTFVPANSSPE >gi|333596722|gb|GL892090.1| GENE 4 1542 - 2021 454 159 aa, chain - ## HITS:1 COG:no KEGG:JW2614 NR:ns ## KEGG: JW2614 # Name: yfjQ # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 159 115 273 273 314 96.0 6e-85 MLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLL LPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLS GRNAKGGRSHTRAVRGIDGDVKLNRALWVMAEALLTQLQ Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:10 2011 Seq name: gi|333596721|gb|GL892091.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD6, whole genome shotgun sequence Length of sequence - 3051 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 34 - 2940 97.0 # AP006725 [R:4755578..4758479] # 23S ribosomal RNA # Klebsiella pneumoniae NTUH-K2044 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella. Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:11 2011 Seq name: gi|333596720|gb|GL892092.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD7, whole genome shotgun sequence Length of sequence - 2080 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 25 - 450 320 ## Pecwa_0375 hypothetical protein - Prom 516 - 575 3.9 2 2 Tu 1 . - CDS 1146 - 1373 183 ## XNC1_2906 hypothetical protein Predicted protein(s) >gi|333596720|gb|GL892092.1| GENE 1 25 - 450 320 141 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_0375 NR:ns ## KEGG: Pecwa_0375 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 8 139 10 141 145 181 67.0 1e-44 MKDLENPKIESEINSFVEQENEFHDNKKYVEALEQYQKAWQALPEPKLEWELANWISACM YSAYFDLADYAEAKKWGETTLRTRGSDIDTAPLIDLGMVCYELNQFEEAYKYFNDAYNYG KERAFQDRPKKYLEFYLRKRG >gi|333596720|gb|GL892092.1| GENE 2 1146 - 1373 183 75 aa, chain - ## HITS:1 COG:no KEGG:XNC1_2906 NR:ns ## KEGG: XNC1_2906 # Name: not_defined # Def: hypothetical protein # Organism: X.nematophila # Pathway: not_defined # 1 75 1 75 75 82 62.0 8e-15 MYFLERKDAEKMLFEFLKRTLIKESDIDELMSMAIKHESGPPMKGIMFKYDKMERNELTA QDRDDLSTLMHFYGP Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:17 2011 Seq name: gi|333596719|gb|GL892093.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD8, whole genome shotgun sequence Length of sequence - 1689 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 331 318 ## JW0239 hypothetical protein + Term 358 - 396 4.0 2 1 Op 2 . + CDS 408 - 647 212 ## JW5023 hypothetical protein + Term 701 - 733 2.2 3 2 Op 1 . + CDS 745 - 1203 629 ## JW5022 hypothetical protein 4 2 Op 2 . + CDS 1219 - 1687 410 ## COG2003 DNA repair proteins Predicted protein(s) >gi|333596719|gb|GL892093.1| GENE 1 2 - 331 318 109 aa, chain + ## HITS:1 COG:no KEGG:JW0239 NR:ns ## KEGG: JW0239 # Name: ykfB # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 109 47 155 155 211 100.0 7e-54 KTFTINCTGNPDQNGFYQHSVFLTLADDKMVSSHDDDTTITVVMDHQQYIIPSSLGWRNG DNAWFDFISNISEAGQFDVYVNDHKAGTFTADRKNAEKVLSTLGDCSND >gi|333596719|gb|GL892093.1| GENE 2 408 - 647 212 79 aa, chain + ## HITS:1 COG:no KEGG:JW5023 NR:ns ## KEGG: JW5023 # Name: ykfF # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 79 1 79 79 145 100.0 7e-34 MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAG EGLNRYIRTSGIRTDTATR >gi|333596719|gb|GL892093.1| GENE 3 745 - 1203 629 152 aa, chain + ## HITS:1 COG:no KEGG:JW5022 NR:ns ## KEGG: JW5022 # Name: yafX # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 152 1 152 152 316 100.0 2e-85 MTTQTQHDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWLLLEPHIFAWMDRFCEG YSGGIWSFYTLSNGGAFMSPEPDNDETWRLFNCLNGNDAQMSAEAAGIAVCLIAYSHHAC RTECDAMTAHYYRLREYAMQHPEAHAILRIID >gi|333596719|gb|GL892093.1| GENE 4 1219 - 1687 410 156 aa, chain + ## HITS:1 COG:ykfG KEGG:ns NR:ns ## COG: ykfG COG2003 # Protein_GI_number: 16128232 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli K12 # 1 156 1 156 158 285 100.0 2e-77 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:29 2011 Seq name: gi|333596718|gb|GL892094.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD9, whole genome shotgun sequence Length of sequence - 1634 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 51 - 1584 99.0 # AB114268 [D:1..1537] # 16S ribosomal RNA # Enterobacter sp. B901-2 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter. Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:30 2011 Seq name: gi|333596717|gb|GL892095.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD10, whole genome shotgun sequence Length of sequence - 1246 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 23/0.000 - CDS 7 - 660 206 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 873 - 1175 282 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|333596717|gb|GL892095.1| GENE 1 7 - 660 206 217 aa, chain - ## HITS:1 COG:VC0257 KEGG:ns NR:ns ## COG: VC0257 COG2801 # Protein_GI_number: 15640286 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Vibrio cholerae # 1 216 74 289 290 338 71.0 4e-93 MGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTYIW TGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFHSDQGSHY TSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDY IVGYYSALRPHEYNGGLTPNESENRYWKNSNAVASFC >gi|333596717|gb|GL892095.1| GENE 2 873 - 1175 282 100 aa, chain - ## HITS:1 COG:yi91a KEGG:ns NR:ns ## COG: yi91a COG2963 # Protein_GI_number: 16128240 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 88 13 100 134 158 100.0 3e-39 MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPI TPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:31 2011 Seq name: gi|333596716|gb|GL892096.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD11, whole genome shotgun sequence Length of sequence - 1128 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1128 1561 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|333596716|gb|GL892096.1| GENE 1 1 - 1128 1561 376 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 376 16 404 407 605 77 1e-174 GTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTR HYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPFIIVFL NKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALEGEAEWEXKIIELAGF LDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETAKST CTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGSIKPHTKFESEVYILSKD EGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRF AIREGGRTVGAGVVAK Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:31 2011 Seq name: gi|333596715|gb|GL892097.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD12, whole genome shotgun sequence Length of sequence - 911 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:31 2011 Seq name: gi|333596714|gb|GL892098.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD13, whole genome shotgun sequence Length of sequence - 676 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 02:50:32 2011 Seq name: gi|333596713|gb|GL892099.1| Enterobacter hormaechei ATCC 49162 genomic scaffold SCAFFOLD14, whole genome shotgun sequence Length of sequence - 550 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 61 - 285 205 ## ECL_01318 phage lysis protein - Prom 336 - 395 2.9 - TRNA 468 - 542 78.6 # Thr TGT 0 0 Predicted protein(s) >gi|333596713|gb|GL892099.1| GENE 1 61 - 285 205 74 aa, chain - ## HITS:1 COG:no KEGG:ECL_01318 NR:ns ## KEGG: ECL_01318 # Name: not_defined # Def: phage lysis protein # Organism: E.cloacae # Pathway: not_defined # 1 74 1 74 74 137 95.0 2e-31 MYRMEKITTGAAYGASAGSILNGMLNAYSPEQWNAIGVLVGIIIAVLTYLTNLYFKIRED NRRSRSRDEPDTQE